LOCUS       DATDHO010000001         2165 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_445620, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000001 DATDHO010000000
VERSION     DATDHO010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2165
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445620"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..1914)
                     /locus_tag="VIY07_00005"
     CDS             complement(142..1914)
                     /locus_tag="VIY07_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase"
                     /protein_id="HEY6380172.1"
                     /translation="MATKMKEVDAVIVGLGWTGGILAKELTEAGLKVVALERGGMRST
                     ANDYSVPQVRDELRYVQRQDLMQNTAKDTLTIRNNPSQEALPMRRLGSFLPGEAVGGA
                     GVHWSGHTWRWTDMEFKVRSLYEERYGKEYIPADMTIQDWGITYAEIEPYYDKFEYMA
                     GVSGKAGNIRGRIQPGGNPFEAPRAREYPLPPLSTVLASQMFSEAAKNHGYHPFPRPS
                     ANASRAYTNPDGARFGACQYCGFCARFGCEANAKGSPHITVIPIAMRNPNFELRTHAW
                     VTKVLKDSSGKRVTGVTYTNVLNGEEYEQPAAMVLLCAYAINNVHLMLLSGIGEPYDP
                     VTQKGMIGKNYCYQTGAGANLFFEGRNFNPFISAGGTNATIDDFNLNWDFDRSKYGFV
                     GGYTIGSGFNSALPIGYRPVPRGTPSWGKEWKAAMAKWYQTAMNIGSSGSVMANRYNY
                     YDLDPTYRNAFGQPLMRMTFDYTENEHKMGRHAAQMVNDIAKSMNPTTFNPASVRTSW
                     SVVPYQSTHNTGGTIMGTNPRNSAVNKYLQSWNAHNLFLIGANVFVHNASYNPTGPVG
                     ALAYWTADAIKNRYIKNPGPLVSA"
     gene            complement(1928..>2165)
                     /locus_tag="VIY07_00010"
     CDS             complement(1928..>2165)
                     /locus_tag="VIY07_00010"
                     /inference="COORDINATES: protein motif:HMM:NF025004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gluconate 2-dehydrogenase subunit 3 family
                     protein"
                     /protein_id="HEY6380173.1"
                     /translation="QAGKVPFENGPPARVFFTTMYQTVIEGMFSDPIYGGNRNKASWK
                     IIGFPGVIAVHYQNVEKFRDKKYSADPLSIADMS"
BASE COUNT          384 a          636 c          649 g          496 t
ORIGIN      
        1 tagctgcacc atcgggcgca tggcaggccc ggcaactctc gaagactttc tcgccacgtt
       61 tgggatcccc ctgcgcgtgc gctacgccgg ctgtcaggat aaacatcgcc gccgcagctg
      121 cgatagtatg gagacctatt ctcatgccga caccaacggc ccggggtttt tgatgtagcg
      181 attcttgatc gcgtccgccg tccagtaggc gagcgcgccc accggaccgg tggggttgta
      241 agacgcattg tggacgaaca cgttggcgcc gatgaggaac aggttatgtg cattccagct
      301 ctgcaggtat ttgttcacag cgctattcct cgggttggtg cccatgatgg taccgcccgt
      361 gttgtgcgtg ctctggtaag gcaccaccga ccaggaggtg cgaaccgagg ccgggttgaa
      421 cgtcgtgggg ttcatggact tggcgatgtc gttgaccatc tgtgcggcat gccgccccat
      481 cttgtgctcg ttttccgtgt agtcaaaggt catgcgcatc aagggttgac cgaaagcatt
      541 gcggtacgtc gggtcgagat catagtagtt gtagcgattt gccatcacgc tgccgctcga
      601 gccgatgttc atcgccgttt gataccactt cgccattgcc gctttccatt ccttacccca
      661 ggacggcgtg ccgcggggca ccggccggta ccctatcggc agagcggaat tgaagccgga
      721 accaatggtg tacccgccga cgaaaccata cttgctgcga tcgaaatccc agttcaagtt
      781 gaagtcgtcg atggtcgcgt tcgtcccgcc tgcagaaatg aacgggttaa agttcctgcc
      841 ttcgaagaag aggttcgcgc cggcgccggt ctggtagcag tagttcttgc cgatcatgcc
      901 tttctgcgtc accgggtcgt acggctcacc tatgcctgac aatagcatca ggtgcacgtt
      961 attgatggca taagcacata ggagcaccat cgccgcgggc tgctcgtatt cttcgccgtt
     1021 cagcacgttt gtataggtta caccggtaac gcgcttgccg ctcgaatcct tgagaacctt
     1081 cgtcacccac gcatgggtgc gcagctcgaa gttcggattg cgcattgcaa tcggaatgac
     1141 ggttatgtgc gggctgcctt tcgcgttcgc ctcgcagccg aagcgcgcgc agaagccgca
     1201 atattggcag gcgccgaatc gcgccccatc aggattcgtg taagcgcggg acgcgttcgc
     1261 gcttgggcgt gggaatgggt gatagccatg gttcttcgca gcctcgctga acatctggct
     1321 cgctaggacc gttgagaggg gtggcagcgg atactcgcga gcgcgtggcg cttcgaaggg
     1381 gttgcccccc ggttgtatgc ggccgcgaat gttccccgct ttccctgaaa cccccgccat
     1441 gtattcgaac ttgtcgtaat agggctcgat ctctgcgtag gtgatgcccc aatcctggat
     1501 cgtcatgtcg gcggggatat actccttgcc gtagcgctcc tcgtagaggc tgcgcacctt
     1561 gaattccatg tcggtccagc gccacgtgtg tccgctccag tgtacgcccg cgccgccgac
     1621 ggcctcaccg ggcaaaaacg aaccgagccg ccgcatcggc aacgcttcct gcgaaggatt
     1681 gttgcggatc gtcagcgtgt ctttcgcggt gttttgcatg agatcctggc gctggacgta
     1741 gcgcagctcg tcacggactt gcggcaccga ataatcgttg gcggtgctac gcattccgcc
     1801 gcgctcgagg gcaacgactt tcaggccggc ctcggtcaat tctttcgcga gtatgccgcc
     1861 cgtccagccc aagccgacga tcacggcatc gacttccttc attttggtgg ccatttcatc
     1921 ctccgtgtca actcatgtcc gcgatgctga gcggatcggc gctgtatttc ttgtcgcgaa
     1981 acttctcgac gttctgatag tgcacggcga taactcctgg gaagccgatg atcttccagc
     2041 tcgccttgtt ccggttgccg ccgtagatcg ggtcggagaa catgccttcg atgacggtct
     2101 gatacatggt agtgaagaag acgcgggcgg gcggtccgtt ttcaaacgga accttgccgg
     2161 cctgg
//
LOCUS       DATDHO010000002         3482 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_145, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000002 DATDHO010000000
VERSION     DATDHO010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3482)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3482)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3482
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..268)
                     /locus_tag="VIY07_00015"
     CDS             complement(<1..268)
                     /locus_tag="VIY07_00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY6380174.1"
                     /translation="MTKIIIDGKEIDVPPEYTLLQACEAAGAEIPRFCYHERLSIAGN
                     CRMCLIEVVGIPKPQASCAMGVKDLPPNKDGSPKIINTKTAMVKK"
     gene            complement(265..759)
                     /locus_tag="VIY07_00020"
     CDS             complement(265..759)
                     /locus_tag="VIY07_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3291 domain-containing protein"
                     /protein_id="HEY6380175.1"
                     /translation="MRQPADHHLAQLNIGRIRYEIDDPRMADFTNNLTLVNGLAERTA
                     GFVWRYIDESGNSTSTRPYADPRIAINLSVWESVEALERFVYQTLHKRFYGRRAEWFE
                     HFEGPYFVMWWVSAGHRPSVEEAVARLDHLKQHGPSDHAFDWETALAQLWKTARCAPS
                     ESAA"
     gene            complement(765..2075)
                     /gene="nuoF"
                     /locus_tag="VIY07_00025"
     CDS             complement(765..2075)
                     /gene="nuoF"
                     /locus_tag="VIY07_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008125212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEY6380176.1"
                     /translation="MLADKDRIFKNLYGQHDWGLKGARARGAWDGTKAILEKGRDAII
                     EEVKTSGLRGRGGAGFPTGLKWSFMPKKSDGRPHYLVVNADESEPGTCKDREIMRHDP
                     HLLVEGCLIAGFAMGANAGYIYIRGEFVRERERLQAAIDEAYEAKLIGKDNVHGWDFD
                     LYVHHGAGAYICGEETALLESLEGKKGQPRLKPPFPANVGLYGCPTTVNNVESIAVVP
                     DIMRRGALWFAGIGRPNNTGTKLFCISGHVEKPCTVEEAMGIPLRDLLDTHAGGVRGG
                     WDNLLAVIPGGSSMPLVPAGKDWADTLLMDFDGCRDKKSALGTAAVIVMDKSTDIVRA
                     MARISYFYKHESCGQCTPCREGMGWMWRVLTRMADGRAQKREIDMLMQVTQQIEGHTI
                     CAFGDGAAWPVQGLLRHFRPEIERRIDEYARKADASGAVQEAAE"
     gene            complement(2079..2684)
                     /gene="nuoE"
                     /locus_tag="VIY07_00030"
     CDS             complement(2079..2684)
                     /gene="nuoE"
                     /locus_tag="VIY07_00030"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEY6380177.1"
                     /translation="MSVRRLAPPEIQPRDFAFSKENLAWAKKEITKYPEGRQQSAIIP
                     LLWRAQEQHGGWLPEAAIRHVADFLGMAHIRALEVATFYTMFNLWPVGKFHVQLCGTT
                     PCRLRGADDLEKVCRKRIGDQGEVTKDGKFSWIEVECLGACVNAPMVQINYDFYEDLT
                     AESFGKILDNLAAGKKVKPGPQIDRQLSAPVGGATTLKVKA"
     gene            complement(2681..>3482)
                     /locus_tag="VIY07_00035"
     CDS             complement(2681..>3482)
                     /locus_tag="VIY07_00035"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEY6380178.1"
                     /translation="WGFEEREKLMVFYERASGSRMHAAYFRVGGVHQDLPPKLIDDIE
                     AFCDPFLKVCDDLESLLTGNRIFKQRNVDIGVVKLADAWAWGFSGVMVRGSGAAWDLR
                     KSQPYECYAELDFDIPIGKNGDCFDRYLIRMEEMRQSTKIMKQCCERLRSPAGEGPVT
                     VDDNKVVPPRREEMKRSMEALIHHFKLYTEGYHVPAGEVYTAVEAPKGEFGVYLVADG
                     TNKPYKCKIRAPGFAHLQAMDFITRGHMLADVSAILGSIDIVFGEVDR"
BASE COUNT          642 a         1126 c         1011 g          703 t
ORIGIN      
        1 cctttttcac catcgccgtc ttggtattga tgattttcgg cgagccgtcc ttgttgggcg
       61 gcagatcctt cacgcccatg gcgcaagacg cctgcggctt cggaatgccg acaacctcga
      121 tgaggcacat ccggcaattt cctgcgatcg agaggcgctc gtggtaacag aagcgcggaa
      181 tttcagcgcc ggcagcctcg cacgcctgga gcagcgtgta ctccggcgga acgtcgattt
      241 ccttgccgtc gatgatgatc ttggtcatgc cgcagactcg ctgggcgcgc aacgcgccgt
      301 cttccacaac tgcgccaacg ccgtctccca atcgaaggcg tggtcgcttg gaccgtgctg
      361 cttcagatga tcgaggcgcg caacggcctc ctcgacactc ggccgatggc ccgcggaaac
      421 ccaccacatt acgaaatagg gaccctcgaa gtgctcgaac cattcggcgc gacggccgta
      481 gaatcgcttg tgcagcgtct gatatacaaa acgctcaagg gcttcgacgc tctcccagac
      541 agacaaattg atggcgatac gcggatccgc gtaaggccgc gtgctggtcg aattgccgct
      601 ctcgtcgatg tagcgccaaa cgaaacccgc cgtgcgttcg gccaggccat tcaccagggt
      661 cagattgttg gtgaaatccg ccatgcgcgg atcgtcgatc tcataacgaa tgcgaccgat
      721 attgagttgc gcaaggtgat ggtccgcggg ctgacgcatg gtgctcactc tgccgcctcc
      781 tggaccgcgc cactcgcatc cgctttgcga gcatattcgt cgatccgccg ctctatctcg
      841 ggacggaaat gccgcagcaa gccttgtact ggccaggccg cgccgtcgcc gaaggcgcaa
      901 atggtatgcc cctcgatctg ctgagtgacc tgcatcagca tgtcgatctc acgcttctgc
      961 gcgcggccgt cggccatgcg ggtcaagacg cgccacatcc agcccattcc ctcacggcat
     1021 ggcgtgcatt gtccgcaact ctcgtgcttg tagaagtacg aaatgcgcgc catggcacgg
     1081 acgatgtcag tcgacttgtc catgacgatc acggccgcgg tgccgagcgc ggacttcttg
     1141 tcgcggcaac cgtcaaagtc catcaataga gtatccgccc agtccttccc cgccggcacc
     1201 agcggcatgg acgagccgcc aggaatcacc gcgagcagat tgtcccagcc gccgcggacg
     1261 ccgccagcat gcgtgtccaa aaggtcgcgc aacggaatgc ccatcgcctc ttcgacggtg
     1321 catggctttt caacgtgacc ggaaatgcag aacagctttg tgccggtatt gttgggacgg
     1381 ccgatgcccg caaaccataa cgccccgcgg cgcatgatgt ctggcacgac agcgatcgac
     1441 tccacattat tgacggtcgt tgggcaccca tagagcccga cattggccgg gaacgggggc
     1501 ttcagccgcg gctggccttt cttgccttcc aggctttcga gcaacgccgt ctcttcgccg
     1561 cagatatagg cgccggcgcc atggtgcacg tagaggtcga aatcccagcc gtgcacattg
     1621 tccttgccaa tcagcttggc ttcgtaggcc tcgtcaatcg cggcctgcag acgttcccgc
     1681 tcgcggacga attctccgcg gatgtagatg taaccggcgt tagcgcccat agcgaacccg
     1741 gcgatcaggc acccttccac cagcaggtgc ggatcgtgcc gcatgatctc gcggtccttg
     1801 caggttcccg gctcggactc gtcggcattc acgacaaggt aatgcggccg gccgtccgat
     1861 ttcttcggca tgaaggacca cttcaggccg gtcgggaatc ctgcgccgcc gcgccctcgc
     1921 agcccggaag tcttcacctc ttcgatgatc gcatcgcggc ctttttcgag aatagctttg
     1981 gtgccatccc acgcgccacg ggcccgcgcg cccttgaggc cccagtcgtg ctggccgtag
     2041 agatttttga agattctgtc cttgtcagcc agcatcgctc acgcctttac cttgagggtc
     2101 gtggcgccgc cgaccggtgc cgacaattgc cgatcgatct gcgggcccgg cttcactttc
     2161 ttgcctgccg cgagattgtc gagaattttg ccgaagcttt cggccgtcag gtcttcgtag
     2221 aagtcgtagt tgatttgcac catcggcgca ttgacgcagg cacccaggca ctcgacctcg
     2281 atccaggaga atttgccatc cttggtgacc tcgccctggt cgccgatgcg cttgcggcag
     2341 actttctcaa gatcgtcggc gccgcgcagc cggcatggtg tcgtaccgca cagttgcacg
     2401 tggaatttgc cgaccggcca gaggttgaac attgtgtaaa acgtcgccac ttcgagcgcg
     2461 cgaatgtgag ccatgccgag aaagtcggcg acatgacgga tcgccgcttc cggcaaccag
     2521 ccgccatgct gctcctgcgc gcgccacaac aacggaatga ttgccgactg ctgtcggcct
     2581 tccggatatt tcgtgatctc tttcttcgcc cacgcaaggt tctccttgct gaaagcgaag
     2641 tccctgggct ggatttcagg cggcgcaaga cggcggacac tcatcggtcc acctccccga
     2701 acacgatgtc gatcgagccg agaatggcgg acacgtcggc caacatgtgg ccgcgcgtga
     2761 taaaatccat cgcctgcaaa tgtgcaaagc cgggcgcgcg gatcttgcac ttgtatggct
     2821 tgttggtgcc atcggcgacc agatagacgc cgaactcgcc cttgggcgcc tcgacggcgg
     2881 tgtaaacctc gccggcagga acgtgatagc cctcggtgta gagcttgaag tgatggataa
     2941 gcgcttccat cgagcgcttc atctcttcgc gcctcggcgg cacaaccttg ttgtcatcga
     3001 ccgttaccgg tccctctccg gctggcgagc gcaatctctc gcagcactgc ttcatgatct
     3061 tggtcgactg gcgcatctct tccatgcgga tgagatagcg gtcgaagcag tcgccgttct
     3121 tgccgatcgg aatgtcgaaa tcgagctccg catagcactc gtagggctgc gacttgcgca
     3181 ggtcccaggc cgcgcccgag ccgcgcacca tcacgcccga gaagccccag gcccaggcgt
     3241 cggcgagctt aacgactccg atgtcgacgt tgcgctgctt gaagatgcgg ttgccggtca
     3301 gcagcgattc caggtcgtcg cacactttca ggaacggatc gcagaacgct tcgatgtcgt
     3361 cgatcagctt tggcggcagg tcctggtgca cgccgccgac ccggaaatag gccgcgtgca
     3421 tgcgcgagcc cgaggcgcgc tcgtaaaaca ccatcagctt ctcgcgctct tcgaagcccc
     3481 ac
//
LOCUS       DATDHO010000003         6898 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_445728, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000003 DATDHO010000000
VERSION     DATDHO010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6898
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445728"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1170
                     /locus_tag="VIY07_00040"
     CDS             <1..1170
                     /locus_tag="VIY07_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEY6380179.1"
                     /translation="LRLPETRSDLENIRDTARQLADRATDIVILGTGGSSLGGQTLAQ
                     LAGYAVAGIDALGVPPRLHFIDNLDADTFAKLLARLPHATTRFVAISKSGGTAETLMQ
                     TIAVLSALRDAGLQTRIPDIFLGITEPAIPGKPNGLRDLLGKYRVPMLDHDPSVGGRY
                     SALTNVGLLPAAVLGLDVAALRAGAGLALGPVLAKKSAPQVPAAIGAALSVALAQDKA
                     KSISAMMAYCDRLQRFTHWYVQLWAESLGKNGKGTTPVAALGPVDQHSQLQLFIGGPR
                     DKQFTVITVESAKQGPRIDGELTKLAGEPGFGGKTIGDLVAAEGRATAETLGGNGCPV
                     RTLHLDRLDEEGLGELMMHFMLETIIAAHLLGVDPFDQPAVEEGKVLAKKYLIGS"
     gene            1197..1619
                     /gene="arfB"
                     /locus_tag="VIY07_00045"
     CDS             1197..1619
                     /gene="arfB"
                     /locus_tag="VIY07_00045"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HEY6380180.1"
                     /translation="MIRITDSISIDESELAESFVRASGPGGQNVNKVSSAVQLRFDAR
                     HSPSLPNDVAVRLMRLAGKRLTKDGVIVIVAQQHRTQERNREDARNRLFEMIREAAVK
                     PTPRRPTKVPKSERRQRLEAKKHRSTIKSLRRSKSGWD"
     gene            1711..3507
                     /gene="mutL"
                     /locus_tag="VIY07_00050"
     CDS             1711..3507
                     /gene="mutL"
                     /locus_tag="VIY07_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEY6380181.1"
                     /translation="MPVRQLSEAVVNRIAAGEVVERPASVVKELVENALDAGARRIDV
                     LTDGGGRRLIRVTDDGEGMTCADLELAVERHATSKLDSDDLLSIRTFGFRGEALPSIG
                     AAARLTITTSHASEPHAWGITVDAGKKSAVKPAALGQGTTVEVRDLFYATPARLKFLK
                     ADRSEAEAVREVMRRLAMSRPDVSFTVAGEERAPVTWPSAAEGDRLERLADILGSDFR
                     ANAIAIEAERDAVRVTGFAGLPTLSRANSLGQYLLVNGRPVRDKLLFGAVRAAYADYL
                     PRDRHPSLVLFVSLDPREVDVNVHPAKTEVRFRDAGLVRGLIVRALKEALMREGQRAA
                     TTGGTATIATFRPAAVSRRDGYDWRRSPARPATLPMAGGGAVGFAENSQPVFDVGEPA
                     ASVVTFEPAADQIDRPLGAARAQVHETYIVAQTLDGLVIVDQHAAHERIVYERMKSAI
                     EKSGVARQILLIPEVVELDEADVVRLAARTEELSRFGLVIESFGPGAVAVRETPSMLG
                     EVDVRGLMSDLADHMAEWDDSLPLERRLMHVAATMACYGSVRAGRRLKPEEMNALLRE
                     MESVPNSGQCNHGRPTYVELKLTDIERLFGRR"
     gene            complement(3521..4075)
                     /gene="rsmD"
                     /locus_tag="VIY07_00055"
     CDS             complement(3521..4075)
                     /gene="rsmD"
                     /locus_tag="VIY07_00055"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEY6380182.1"
                     /translation="MRVVGGRLRSRPLRGPKSDAVRPTSDRLREALFNILTHSYGDPV
                     TGARVLDLFAGTGALGIEAISRGAAYALFVDEGVEARALLRDNIESLGLGGVTRIFRR
                     DATRLGLAHPLEPFSLAFLDPPYGRVFAEKALLAAREGGWLKPDALVVVEEAADAGFT
                     TPEAFMELERRKYDDTEFVFLRQT"
     gene            complement(4075..5067)
                     /locus_tag="VIY07_00060"
     CDS             complement(4075..5067)
                     /locus_tag="VIY07_00060"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HEY6380183.1"
                     /translation="MADKTDEHVVTGERIAKVIARAGLASRREAEAWIAAGRVSVNGA
                     VITSPALNVTPSDRISVDGTPLRAHERTRLFLYHKPRGLVTTHSDPQGRDTIFGALPK
                     SLPRVISVGRLDINTEGLLLLTNDGGLARMLELPATGWLRRYRVRALGRVRQETLDKL
                     RAGISVDGIRYGSIEATLDREQGANIWLTVGIREGKNREVRKVLEKLGLKVNRLIRIA
                     FGPFDLGELEDGAVKEVETAELRAKLGAQIVAASGADFEAPVHAEESAIRRHPEARDG
                     AQSPRQTTVERPARFPFNARQGHQNHGPRPARGRLNKKGQRRDRSGGPRPSRPK"
     gene            5181..5624
                     /locus_tag="VIY07_00065"
     CDS             5181..5624
                     /locus_tag="VIY07_00065"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011982752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEY6380184.1"
                     /translation="MPSFMQIALEEARAAGARGEVPVGCAIVRDGSVIARAGNRVIAD
                     RDPTAHAELIAIRAAAAAVGSERLTDCDLYVSLEPCAMCATAMSFARIRRLYFGAADP
                     KGGAVEHGVRFFAASTCHHRPEVYGGINESDSAALLKEFFQARRS"
     gene            complement(5632..5763)
                     /locus_tag="VIY07_00070"
     CDS             complement(5632..5763)
                     /locus_tag="VIY07_00070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380185.1"
                     /translation="MPKVESSPKPRQQASESEAAAAAPVSKQAPPPPGMGKFVDKTA"
     gene            complement(5861..>6898)
                     /locus_tag="VIY07_00075"
     CDS             complement(5861..>6898)
                     /locus_tag="VIY07_00075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEY6380186.1"
                     /translation="KDAAPALRLDAALLERYLSTHVAGFAGPLAIRQFKGGQSNPTYL
                     LETPARGYVLRRKPPGKLLPSAHAVDREYRVIRALHAQSFPVAEPLAYCSDESVAGTP
                     FYVMDYVDGRVFWEPQMPDSNPAERVAVYDSMNATIARLHALDPAKIGLGDFGRGENY
                     VARQVERWSKQYRASETEKIDAMERLIDWLPKHIPQSGPVRLVHGDYRLDNLIVARDA
                     PRVLAVLDWELSTLGDPLADFSYHLMAWHMPHSESAAGTATLVGQDLNTLGIPSMIDY
                     VDSYVARTGLDPRPHLSVYLAYNFFRIAAILQGIIGRVRDGTATSEFAPAKAEMIRPL
                     ADKAWDFAQQA"
BASE COUNT         1258 a         2158 c         2210 g         1272 t
ORIGIN      
        1 ctgcgcttgc cggaaacccg cagcgatctc gagaacatcc gtgatacggc gcgccagctt
       61 gcggacaggg caaccgacat cgtcatcctg gggacgggag ggtcgagtct gggtgggcag
      121 accttggcac agcttgccgg ctacgctgtc gcgggtattg atgcattagg tgtgccacct
      181 cggctgcact ttattgacaa tctcgatgca gacacttttg caaagctgct tgccagacta
      241 ccgcacgcga ccacgcgctt cgtcgcaatt tccaagtctg gcggcacggc cgagaccttg
      301 atgcaaacca tcgccgtctt gtcggcgctc agggacgcgg gactgcaaac gcgcatcccc
      361 gacatcttcc tcggcatcac cgagcccgcc atccccggca agccaaacgg cttgcgtgat
      421 ctgctcggca aatatcgcgt tcccatgctc gatcacgatc ccagcgtcgg tggacgctat
      481 tccgccctca ccaatgtcgg actgctgccg gcggcggtgc ttggcctcga cgtcgcagca
      541 ctacgcgcgg gagccggcct ggcgctcggt ccggttctgg ccaaaaaatc tgcgccgcag
      601 gttccggcgg cgatcggtgc ggcgctgtcc gttgcactcg cccaggacaa ggccaagtcg
      661 atcagcgcca tgatggccta ttgcgaccgc ttgcagcgat tcacgcactg gtacgtgcag
      721 ctctgggccg aaagccttgg caagaatggc aagggaacca cgcctgttgc cgcgctgggg
      781 ccggtcgatc agcacagcca gctgcaactg ttcatcggcg ggccgcgcga caagcagttc
      841 accgtcatca ctgtcgaaag cgcgaagcag ggacctcgga ttgacggcga actcacgaag
      901 cttgcaggcg aacctggctt cggcggcaag accattggcg acctggtcgc tgcggaaggg
      961 cgggcgacag ccgaaacgct gggggggaac ggctgtccgg tacgtacgct tcacctcgac
     1021 cgactcgatg aggaagggct cggcgaattg atgatgcatt tcatgctgga gacgatcatc
     1081 gccgcccatc tgctcggcgt ggacccattt gatcagccgg cggtggaaga gggcaaagtg
     1141 cttgcgaaga agtatctgat aggttcttag aacacgtttt gtcatggccg ggtgtcatga
     1201 tccgcatcac cgattcgatc tccatcgatg aatccgagct tgcggaatct ttcgtccgcg
     1261 catccgggcc gggtggccag aacgtcaaca aggtgtcgtc ggcggtccag cttcgtttcg
     1321 atgcgcgcca ttcaccttca ttgcccaacg atgtcgccgt gcggctaatg cgccttgcag
     1381 gcaagcgcct gacgaaagac ggcgtcatcg tgattgtcgc gcaacagcac cggacccagg
     1441 aacgcaaccg cgaggatgcg cgcaaccggt tgtttgagat gatccgggag gcggcagtca
     1501 aaccgacgcc gcgccgcccg acgaaggtcc cgaagtccga gcgccgccaa aggctggagg
     1561 ccaaaaaaca tcgctcgacc atcaaaagcc tgcggcgctc caagtcaggt tgggactagc
     1621 agcaggaata gcgggggcag ctttgactgc aacctcgcgg ctctcgctcc acgccgctag
     1681 agtccggccg attcgatcag gcccgccgac atgcccgttc gccaactgtc cgaagccgtc
     1741 gtcaaccgca tcgcggccgg tgaggtcgtc gagcggccgg cgagcgtcgt gaaggagctg
     1801 gtcgagaatg cgctcgacgc cggcgcgcgc cggatcgatg tgctcactga cggcggcggg
     1861 cggcggctta tccgcgtcac ggacgatggc gagggcatga cctgtgccga tctcgaactc
     1921 gccgtcgagc gccacgcaac ttcgaagctc gacagcgacg atctcctttc gatccgcaca
     1981 ttcgggtttc gcggcgaggc gctgccttcg atcggcgcgg cggcccggct aacgattaca
     2041 acgagccatg caagcgagcc ccacgcctgg ggcattaccg tcgacgccgg caaaaagtcg
     2101 gctgtaaagc ccgcggccct tggacaaggg acgaccgtgg aggtccgcga cctgttctat
     2161 gccacgccgg cacggctgaa gtttctcaaa gccgatcgca gcgaagctga ggcggtgcgc
     2221 gaagtgatgc ggcggttggc catgagccgg cccgatgtct ctttcacggt agcgggcgaa
     2281 gagcgggcgc cggtgacatg gccctccgcc gccgagggcg accggctcga acggctcgcc
     2341 gacatcctcg ggtccgattt tcgggccaat gcaatcgcca tcgaggccga gcgcgacgca
     2401 gtgcgcgtga ccggctttgc cggactgccg acgctctcgc gtgccaattc acttgggcaa
     2461 tacctgctcg tgaacgggcg gccggtccgc gacaagctgt tgttcggagc ggtgcgggcg
     2521 gcctatgcgg attatctgcc ccgcgaccga catccctcgc ttgtgttgtt cgtcagcctc
     2581 gacccgcgcg aagtggacgt gaacgtgcac cccgccaaga ccgaggtgcg atttcgcgat
     2641 gccggtctcg tgcgcgggtt gattgtgcgc gcactcaagg aagcgctgat gcgcgaaggc
     2701 cagcgcgcgg cgaccacggg gggcactgca accatcgcaa cttttcgacc ggctgcggtg
     2761 tcccggcggg acggttacga ctggcgacga tctccggctc gccctgctac tttgcccatg
     2821 gccggcggtg gggccgtcgg tttcgccgag aattcccagc ctgttttcga tgtcggcgag
     2881 cccgcggctt cggtggtgac gttcgaaccg gccgccgatc agattgatcg gccgctgggc
     2941 gctgcgcgcg cccaggttca cgaaacctac atcgtcgcac agaccctcga tggcctcgtc
     3001 atcgtcgacc agcacgccgc acatgagcgc atagtctacg aacgcatgaa gtcggcaatc
     3061 gaaaagtccg gcgtggctag gcagatcctg ctcattcccg aggtcgtcga actcgatgag
     3121 gccgatgttg tccggctcgc cgcccggacg gaagaactgt cgcggttcgg tctggtgatt
     3181 gagtcattcg gtcccggcgc agtcgccgtt cgagagacgc cctccatgtt aggagaggtg
     3241 gatgtaaggg gcctgatgag cgatttggcg gaccacatgg cagagtggga tgactcgctg
     3301 ccgctggaac gtcgcctcat gcatgtggcg gcgacaatgg cttgttatgg ctcggtccgc
     3361 gccggaaggc ggctgaaacc agaagaaatg aacgcgctcc tgcgcgagat ggagtcggtg
     3421 cccaattccg gccaatgcaa tcacggccga ccgacttacg tcgaactcaa actcaccgac
     3481 atcgagcgct tgttcggacg ccggtagttg ttggcagcga ctaggtctgg cgcaaaaaca
     3541 cgaattcggt gtcgtcgtat ttgcggcgtt ccaattccat gaaggcctcg ggcgtcgtga
     3601 atccggcatc ggcggcttct tcaacgacaa caagcgcgtc cggtttaagc cacccgccct
     3661 cgcgtgccgc gaggagggcc ttttccgcaa ataccctgcc gtaaggcggg tctagaaaag
     3721 cgagcgagaa cggctcgagg ggatgagcga gtcctagtct ggttgcgtcg cgccggaaaa
     3781 tccgcgtcac cccgccgaga ccgagcgact cgatgttgtc gcgcaacagc gcacgagcct
     3841 ccacgccctc atcgacaaag agcgcataag cggcgccacg cgaaatggcc tcgatgccaa
     3901 gcgccccggt accggcaaac agatcaagca cgcgcgcgcc ggtgaccgga tcgccgtagg
     3961 aatgcgtgag gatgttaaac agcgcctcgc gcagccggtc actcgtcggc cgtactgcgt
     4021 ccgatttcgg tccccgcagc gggcgcgagc ggagcctgcc cccgacgaca cgcattattt
     4081 tggcctcgat ggacgcggtc cgcctgaacg gtcgcgtcgc tggcccttct tatttaatcg
     4141 cccgcgcgcg ggtcttggtc cgtggttttg atggccttgc cgcgcattga aaggaaatcg
     4201 ggccggccgc tccactgtcg tttgccgcgg cgattgtgcc ccatcacgcg cctcaggatg
     4261 gcgccgtatg gcagactcct cggcgtgcac aggcgcttca aaatcggcgc ccgaagcggc
     4321 aacgatctgc gcgcccagct ttgcccgcaa ctctgcggtt tcgacttcct tcaccgcgcc
     4381 atcctcaagc tcgccaagat cgaacggccc aaatgcgatg cggatcaacc ggtttacctt
     4441 caagccgagc ttttcaagga ccttgcgcac ttcgcgattc ttgccctcgc gaatgccgac
     4501 agtgagccag atgtttgcgc cttgctcgcg atcgagggtc gcttcgatgg aaccgtagcg
     4561 gatgccatcg actgatattc ccgctcgaag cttgtcgagc gtttcctgcc gtacgcgccc
     4621 gagcgcgcgc acgcggtaac ggcgcaacca gccggtcgcc ggcaattcca gcatgcgcgc
     4681 cagtccgccg tcgttggtga gcagcagcag accctcggta ttgatatcga gcctgccgac
     4741 gctgatcacg cgcggcagac ttttaggaag cgcgccgaaa attgtatcgc ggccttgtgg
     4801 atccgagtgg gtcgtcacca ggccgcgcgg cttgtggtag aggaaaagcc gcgtgcgctc
     4861 atgcgcgcgc aagggcgtgc catcgacgga aatgcgatcg gacggggtga cattcagcgc
     4921 cggagaagta atcacggcgc cgttgacgga cactcggccc gccgcgatcc aggcctctgc
     4981 ctcgcgacgt gaggcgaggc ccgcacgcgc aatcaccttg gcgattcgtt cgcccgtcac
     5041 cacatgctcg tctgttttat ccgccattga agatcttcgt tgcgaccggg cttgtcccgg
     5101 ccatcgacgt cttttatgtc gcttcgtgta taaagacgtg gatgcccggc acaaggccgg
     5161 gcacgacagc atcggcagcc atgccttctt tcatgcagat cgcacttgaa gaagcccgtg
     5221 cggcgggggc gcggggcgag gtgcccgttg gatgtgctat cgtgcgggat ggcagcgtga
     5281 ttgcgcgggc cggcaaccgc gtcatcgccg accgcgaccc cactgcgcat gccgagctta
     5341 tcgccattcg tgccgccgcg gccgcggtag gaagcgagcg actgacggac tgcgatctgt
     5401 atgtctctct ggagccgtgc gccatgtgcg cgacggcaat gtcgtttgcg cgaattcgca
     5461 gactttactt cggcgccgcc gatcccaagg gtggtgccgt cgagcatggc gttcgtttct
     5521 tcgccgcgtc gacgtgccat caccggcccg aagtctatgg cggcatcaac gaaagcgaca
     5581 gcgcggcgct gttgaaagaa ttctttcagg ctcggcgatc gtgaaaccgg gctaggctgt
     5641 cttgtccacg aacttgccca tgccgggcgg cggaggagcc tgctttgaga ccggcgcggc
     5701 cgcggcggcc tcgctttcgc tggcttgctg gcgcggcttc ggcgagcttt cgaccttagg
     5761 cataatgcca atttagccgc ccgagtctca attatgtgcg tcggcacggc gacaaatccg
     5821 gttttcctcg gaaaggattt gttgatgctg ccgaagcgga tcaggcctgt tgcgcgaaat
     5881 cccaggcctt gtcagcgagg gggcggatca tttcggcttt tgccggagcg aattcgctgg
     5941 tcgccgtgcc atcgcgaacg cggccgatga tgccctgcag gatggcggcg atgcggaaaa
     6001 aattataggc gaggtagacg gacaggtgag ggcgagggtc gagtccggtg cgcgcgacgt
     6061 aactgtcgac gtagtcgatc atcgaaggga tgccgagcgt attaaggtcc tggccgacga
     6121 gcgtcgctgt tccggccgcg ctttcggagt ggggcatatg ccaggccatc aggtggtagc
     6181 tgaaatcggc cagcggatcg cccagcgtcg acagctccca atcgagcacg gcaaggactc
     6241 gcggcgcatc gcgcgcgacg atcagattgt cgagccgata gtcgccatgc acgagccgca
     6301 ccggaccgct ctgcggaatg tgcttgggca gccagtcaat caagcgctcc atggcatcga
     6361 tcttttcggt ctccgatgcg cggtactgtt tcgaccatcg ttcaacctgc cgggcgacat
     6421 agttttcgcc tctgccgaaa tcgccaagac cgatcttcgc cggatcgagc gcatggaggc
     6481 gggcaatcgt ggcattcatc gaatcataga cggccactcg ctcggctgga ttggagtccg
     6541 gcatttgcgg ttcccagaac acgcggccat cgacgtaatc catcacgtaa aacggcgtgc
     6601 cggcgacgct ctcgtcggaa caataggcga ggggctccgc gacaggaaag ctttgcgcat
     6661 ggagcgctcg aatgacgcga tattcgcggt ccaccgcatg agccgacgga aggagcttgc
     6721 ccggcggctt gcggcgcagc acgtagcccc gcgccggcgt ctccagcaaa tatgttgggt
     6781 tcgactgccc gcccttgaac tgcctgattg cgagcgggcc cgcgaaaccc gcgacatgtg
     6841 tggacagata gcgttcaagc agcgctgcat ccagacgcag cgccggcgca gcgtcctt
//
LOCUS       DATDHO010000004         2042 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_346844, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000004 DATDHO010000000
VERSION     DATDHO010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346844"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="VIY07_00080"
     CDS             <1..465
                     /locus_tag="VIY07_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380187.1"
                     /translation="ASLVLNFGTEKNLFYILGGYSRLNFGESSPYLFTDNAVHGAVGD
                     RVSVVRGTTPGSGGNITALASVGGARAEVSGTTALKSEPEAKLSPAEQLEHRIDVQDA
                     RAQAKAAASEKRAEAKAKGYEGEACTECGNFTLVRNGTCMKCDTCGSTTGCS"
     gene            456..737
                     /locus_tag="VIY07_00085"
     CDS             456..737
                     /locus_tag="VIY07_00085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380188.1"
                     /translation="MLVNIPNSIVVATAITSLLLAGCAGHSLDCVTGTSSKDCAPGTI
                     GHQQMVQERQGEDTVASIDDARCRSYAAPGSKDYFDCRSRAASARKLSR"
     gene            complement(762..1163)
                     /locus_tag="VIY07_00090"
     CDS             complement(762..1163)
                     /locus_tag="VIY07_00090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380189.1"
                     /translation="MTLHPVMRTVAMLALLCAGAFLHSDTVRAQVFDFGQIDAFESLG
                     SGTQRGGSPPKTIVDDGERHTVFFTIFESNTDAKIYWRSMDGDQTTLMHGPGVKAFQT
                     AGSFKVEALGDESRSFKYGYVLLRLKNSRGT"
     gene            1299..1943
                     /locus_tag="VIY07_00095"
     CDS             1299..1943
                     /locus_tag="VIY07_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEY6380190.1"
                     /translation="MGTKFTWDYDRGETVADAVIHILGIAVAVGGAAVLAVIAVHQGD
                     ITELTAIAIYLVALLAMFGFSAAYNLWPVSPLKWWLRRLDHSAIYLLIAATYTAFLLP
                     MRGTAPTVVLIVIWSVATAGIAIKLLWPGRFDRTAVGLYLSMGWSGIFTIGPITAALA
                     PATLWLIGAGGVLYSVGVIFHAWSSLRFQNAIWHGFVLVAALCHYAAVLTSLVT"
BASE COUNT          363 a          668 c          620 g          391 t
ORIGIN      
        1 gccagcctgg tgctcaactt cggcaccgag aagaacctct tctacatact gggcggctac
       61 agccggctca atttcggcga gtcgtcgccc tacctgttta ccgataacgc ggtgcatggc
      121 gcggtcggcg atcgcgtgtc cgtggtgcgc ggcacgacgc ccggttcggg cggcaatatc
      181 accgccctcg cctccgtcgg cggcgcccgc gccgaggttt ccggcacgac ggcgctcaag
      241 agcgaaccgg aagccaagct ctcgcccgcc gagcaactcg agcatcgcat cgatgtgcag
      301 gacgctcgcg cgcaagcaaa ggcagcggcg tccgagaagc gtgccgaggc aaaagccaaa
      361 ggctacgagg gcgaagcgtg cacggagtgc ggcaacttta ccctggtgcg caacggcacc
      421 tgcatgaagt gcgatacctg cgggtcaacg acggggtgct cgtaaacatt ccgaacagca
      481 tcgtcgtagc gactgcgata accagcctgc ttcttgcggg atgcgcaggc cattcgctcg
      541 actgcgtcac aggcacgtcg agcaaggact gcgcgcccgg aacgatcggc catcagcaga
      601 tggtgcagga gcggcagggc gaggacacgg tcgcatcgat cgacgacgcc cgctgccgct
      661 cgtacgcagc gccagggtcg aaggattact ttgattgccg cagccgggca gcgagcgcgc
      721 gtaaactgtc gcggtaggtc ggcagcccac attcctgccg gtcaggtccc tcgactattc
      781 ttcaggcgaa gcagcacata gccatattta aagctgcggc tctcgtcgcc gagcgcttcg
      841 accttgaacg agccggcggt ctgaaatgcc ttcacgcccg gtccatgcat caacgtcgtc
      901 tggtcgccat ccatcgagcg ccagtagatc ttggcgtcgg tgtttgactc gaagatggtg
      961 aagaacaccg tgtgccgctc gccgtcatcg acgatcgtct tcggcggcga tccaccccgc
     1021 tgggtccccg aacccagcga ctcaaacgcg tcgatctggc cgaaatcgaa gacctgagcg
     1081 cgtacggtat cggagtgcaa aaatgcgccc gcgcagagca gcgccaacat tgcaacggtg
     1141 cgcatgacag gatgcagagt catggcattt cgacctcggt aagatttgcc tcctataaca
     1201 ctaatttcaa ccggttcgtt ccgatgccac ggcggcgcgg cacaatcgga ctttgctgca
     1261 gccctttcgc tgccgcaatg cacaagtatg cgagcaccat gggcaccaaa tttacctggg
     1321 attatgaccg cggcgagacc gtcgccgacg ctgtgatcca catcctgggg attgccgtcg
     1381 cggtcggtgg cgccgcggtg ctggccgtca ttgccgtgca ccagggcgat atcaccgaac
     1441 tgacagcgat tgcgatctac ctcgtggcac ttctggcgat gttcggcttc tcggcggcct
     1501 ataacctgtg gccggtgtcg ccgttgaaat ggtggctgcg gcgcctcgat cactcggcga
     1561 tctatctgct gatcgcggcg acctataccg ctttcctgct gcccatgcgg ggcaccgccc
     1621 ccaccgtcgt cctcattgtc atctggtccg tcgcgaccgc cggcattgca atcaagctcc
     1681 tgtggcccgg ccgcttcgac cgcaccgcgg tcggcctgta tctctcgatg ggctggagcg
     1741 gcatcttcac gatcggcccc atcactgcgg cgctcgcacc ggcaacgcta tggctcatcg
     1801 gcgcaggcgg cgtgctctat tcggtgggcg tcatctttca cgcctggagc agcctgcgct
     1861 ttcagaatgc gatctggcac ggctttgtac ttgtcgcggc gctgtgccac tacgccgccg
     1921 tgctgacgtc gttggtcacg taacggcgtc agtcgaccct acttggcggt cgcggctttc
     1981 aggatcggcc ccagccggtt tacctcgctc ctctgcagat ccgccaaagc ctttggtccc
     2041 cg
//
LOCUS       DATDHO010000005         2098 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_49733, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000005 DATDHO010000000
VERSION     DATDHO010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49733"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2098
                     /gene="metH"
                     /locus_tag="VIY07_00100"
     CDS             <1..>2098
                     /gene="metH"
                     /locus_tag="VIY07_00100"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEY6380191.1"
                     /translation="QLRLSGLESFTLTPEIPFVNVGERTNVTGSAKFRKLITAGDYPT
                     ALSIARGQVENGAQVIDVNMDEGLLDSEHAMTTFLNLIAAEPDIARVPVMVDSSKFSV
                     IEAGLKCLQGKSVVNSISMKEGEAAFIDHARTVRRYGAAVVVMAFDEKGQADTLERKT
                     TISRRAYDILVNQVGFPPEDIIFDPNIFAVATGMEEHNSYGAAFIEASGWIRKNLPHV
                     HVSGGVSNLSFSFRGNERVRQAMHSVFLYHAIKTGMDMGIVNAGQIAVYDDLDPELRE
                     ACEDVVLNRRSDAAERLLDLAKKFQGAGQEAKEVDLAWREHPVEKRLAHALVHGITEF
                     IEADVEEARKRAKRPLEVIEGPLMDGMNIVGDLFGSGKMFLPQVVKSARVMKQAVAYL
                     MPFMEQEKDGRQHGGSNGKIVMATVKGDVHDIGKNIVGVVLQCNNYDVIDLGVMVPAA
                     KILDTARAERADIIGLSGLITPSLDEMCHVAAEMERQGFELPLMIGGATTSRVHTAVK
                     IHPNYRRGQAVYVNDASRAVGVAQTLMSVNNRAGYVAELRGEYARIAAAHARAQEDKT
                     RLPLAAARANALKLDWSGAYQPPKPSFLGTKVLSDYSIKELIDYIDWTPFFATWELPG
                     KFPGILDDEKFGAAARSLYDDARAMLEKIVAEHWFRANAVFGFWRANAEGDDISLYAD
                     DARDKPAAVLHSLRQQL"
BASE COUNT          434 a          607 c          649 g          408 t
ORIGIN      
        1 ccaattgcgc ctgtcgggcc tggagtcgtt cacgctcacg cccgaaatcc ctttcgtcaa
       61 cgtcggcgag cggaccaacg tcaccggctc cgcgaagttt cgcaagctga tcacggccgg
      121 cgattacccg accgcattgt cgatcgcgcg ggggcaggtc gagaacggcg cccaggttat
      181 cgacgtcaat atggacgaag gcttgctcga ctccgagcac gcaatgacga cctttctcaa
      241 tctgattgcc gccgagcccg acatcgctcg tgtgccggtg atggtggact catcgaagtt
      301 ttcggtaatc gaagccggcc tgaagtgcct gcaagggaag tcggtggtca attcaatctc
      361 gatgaaggag ggtgaggcgg ccttcatcga tcacgcccgt accgtacgcc gttatggcgc
      421 ggcggtggtt gtgatggcgt tcgatgaaaa aggccaggcc gatacgctcg aacgcaagac
      481 gacaatctcc cggcgcgcat acgacatcct ggttaaccag gtcggatttc cgcccgagga
      541 catcatcttc gaccccaaca tctttgccgt cgcgaccggc atggaagagc acaacagcta
      601 cggcgccgct tttatcgagg cttcgggctg gattcgaaag aacctgcctc acgtccacgt
      661 ctcaggcggc gtttcgaacc tgtcgttctc cttccgcgga aacgaacggg tgcgtcaggc
      721 catgcactcg gtgtttctct atcacgccat caaaaccggc atggacatgg gcatcgtgaa
      781 tgctgggcag attgcggttt atgacgatct cgatcccgag ctgcgcgaag cctgcgaaga
      841 tgtggttctg aaccgtcgat ccgatgcagc cgagcgactc ctggacctgg ccaagaaatt
      901 tcaaggggcg ggacaagagg ccaaggaagt cgatctcgcg tggcgggagc acccggtcga
      961 aaagcggctc gcgcatgcgc tggttcacgg cattacggaa tttatcgagg ccgacgtcga
     1021 agaagcccgc aagcgagcga agcggccgct cgaggtgatc gagggtccgt tgatggacgg
     1081 catgaacatc gtcggcgatc tgttcggctc cggcaaaatg ttcctgcctc aggtcgtgaa
     1141 atccgcgcgc gtgatgaaac aggccgtggc ttacctgatg cccttcatgg agcaggaaaa
     1201 agacggtcgc cagcatggcg gctccaacgg caagatcgtg atggcgaccg tgaaaggcga
     1261 cgtgcacgat atcggcaaga acatcgtcgg cgtcgtgctc cagtgcaaca attacgacgt
     1321 gatcgatctc ggcgtcatgg tgcccgcagc caaaatcctg gacaccgccc gcgccgagcg
     1381 ggcggatatc atcggtctgt ccggtctaat cactccttcg ctcgacgaaa tgtgccatgt
     1441 cgcggcggag atggagcgcc agggctttga actgccgctg atgatcggcg gagccacgac
     1501 gagccgggtt catacggcag tgaagatcca tccgaattac cggcgcggcc aggccgtcta
     1561 tgtcaacgac gcgagccgcg cagtcggcgt ggcgcagacg ctgatgtcag tcaataaccg
     1621 ggccggttat gtcgccgagt tgcgcggcga gtacgctcgc atagcagccg cgcatgcgcg
     1681 tgcccaggag gataagaccc gcctgccgct tgcggccgct cgtgccaatg cgctgaagct
     1741 cgactggtcc ggcgcctacc agccgccgaa gccgagcttt ttagggacaa aagttttaag
     1801 cgactattcg atcaaggaat tgatcgatta catcgactgg actccgttct ttgcgacctg
     1861 ggagctgccc ggaaaatttc caggcattct cgatgacgag aaattcggtg ccgccgcgcg
     1921 ctcactctat gacgatgcgc gtgccatgct ggaaaaaatc gtggccgagc attggttcag
     1981 ggcaaacgca gtattcggtt tctggcgcgc gaatgcggag ggcgacgata tctctcttta
     2041 tgctgatgac gcgcgcgaca agccggcggc tgttttgcat tcgctgcggc agcagttg
//
LOCUS       DATDHO010000006         1703 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_99309, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000006 DATDHO010000000
VERSION     DATDHO010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99309"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..404
                     /locus_tag="VIY07_00105"
     CDS             117..404
                     /locus_tag="VIY07_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007756168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEY6380192.1"
                     /translation="MHISGESLLVILLVGLVAGWLAGKIVEGSGFGLIGDIAVGIVGA
                     LIGSWLMPKLGIRIASGMVSAIIVATIGAVLLLAMVKLATGAYPRRRWWRF"
     gene            complement(862..1062)
                     /locus_tag="VIY07_00110"
     CDS             complement(862..1062)
                     /locus_tag="VIY07_00110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380193.1"
                     /translation="MKSIVTILGVILVVAAAVYFLVPADALPTFFPGHETGLMRIRAK
                     HGMLSGALGIALLALSWWMRRR"
BASE COUNT          355 a          491 c          499 g          358 t
ORIGIN      
        1 cgcatgcaaa tcaggagcat acaagcgggc aggaacaatc gctttccaat ctcattgttg
       61 gaccagagaa ttgcctcggc atgtgggtcg tacgaggcct gccagagggt tggacaatgc
      121 acatatcggg cgaaagtctt ctcgtcattt tattggtcgg tcttgttgcc ggctggcttg
      181 ccggaaaaat tgttgagggc agcggatttg gcctgatcgg cgatatagcc gtcgggatcg
      241 tcggcgcgct gatcggcagt tggctgatgc cgaagctggg aattcgcatc gccagcggaa
      301 tggtgtcggc gattatcgtc gccacgatcg gcgcagtact cctgctcgcc atggtaaagc
      361 tcgcaacggg cgcctatccg cggcggcgtt ggtggcgatt ctaggatgga attggccgcc
      421 ggctgtcgaa gttaacctgt ggaatagcgt ggacagctgc cgcaaatcgc acatcctgtg
      481 accctcatca cagttgcctt gtcggggccg ttctaaaccc cggtggattt tcggagcgct
      541 ctggcgctct gaaaaaaagg ggccgctcgt ccagtcgaca gcggcccaaa agaaggccac
      601 cggcggggtg acgccggtgg ctgcccgtta ccaaaaaggg ccggccccgc ttttttgtga
      661 cgaaattgta gcaatcccca attttaccgc cggcagctgg ctatgactca cgttgcgtgg
      721 cgaaaacgtc accgacaatc ttgcagcgca cccacgccgc cgaaacgctt cgcagatagc
      781 ctttgtcgat ggtggcctgc caccactgcc aacgccaaaa aaatcaggtg ccgtttgctt
      841 accccgcgtt gcgggaagcc gttacctccg ccgcatccac cagctcaggg cgagcagcgc
      901 gatccccaag gctccggaga gcatgccgtg cttggcgcgg atgcgcatta aacctgtttc
      961 gtgccccggg aaaaatgtcg gcagcgcatc cgccggtacg aggaaataaa ccgctgcggc
     1021 gacgacaagg atgacgccga gaatcgtgac aattgatttc attggcgatc tcgcttcctg
     1081 aaagtgaaac cgggctcact cagtatagaa agatgcggcc tgcgccaaca gcacgacggc
     1141 tcatcgaccg ccagtcatcc gcttcacgcg aatgacctcc acacaggcga caaagatgaa
     1201 gccgcccagt agcgagattg cgtcaagagc cgtccgcaac caccgtgcaa gttgaccgat
     1261 cattgtctca gatctttgcg ctgcatttcc gcgctcgcgc ctgctttgac ttgaatgttc
     1321 attctgggac gccgattgaa gtaatcgtgc gaggtcggcg cggaattgcg aacggtgtcc
     1381 ggagagccga cattgcacgt ctgattgagc tcaatgcgca gcgtcgagcg tgttcgtttt
     1441 ttattgacct gatggcgcat cgttttcgac tccttgcgcc attgtgtccc tccgatgcgc
     1501 ttttgacaat attcctatag gattatatac ctaaagtagt ggggaaccaa gcgcacgcga
     1561 cgcggttgtg cgggttcccc agcccgcccc ccgttgcact ttcgtcatgc acggccttgt
     1621 gccgggcatc caagtctctg cggttcgcaa aaagcaagac gtggatggcc gggacaagcc
     1681 cggccatgac gcggcggaac agc
//
LOCUS       DATDHO010000007         9923 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_363, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000007 DATDHO010000000
VERSION     DATDHO010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 9923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9923
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..615)
                     /locus_tag="VIY07_00115"
     CDS             complement(<1..615)
                     /locus_tag="VIY07_00115"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEY6380194.1"
                     /translation="MPLSVKICGLRTPQALDVALDSGADLVGFVFFAPSPRHLGLEAA
                     RTLGQRVQGRAGKVALTVDANDDTLLDIVGALKPDMLQLHGSETPERVVAVRTRFGLP
                     VMKALPVAERKDLSTMRQYAQVVDRLIFDARAPKDATRPGGLGKPFDWTLLKDIKAPV
                     PFMLSGGLDADNVSEALRITRALGVDVSSGVERSPGEKDPDKIRA"
     gene            complement(675..1043)
                     /locus_tag="VIY07_00120"
     CDS             complement(675..1043)
                     /locus_tag="VIY07_00120"
                     /inference="COORDINATES: protein motif:HMM:NF018058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HEY6380195.1"
                     /translation="MLRRIVSMLIVLPLAIVIVAFAVANRQSVTVSFDPFSSTSPAYA
                     ATLPLFVLIFVLMILGVLIGGAAVWIGQTRWRRSARKLDGEVRSLHQELDSIRRRFAP
                     GSSQTSADPAPYTAIPPPIP"
     gene            complement(1130..1420)
                     /gene="ihfB"
                     /locus_tag="VIY07_00125"
     CDS             complement(1130..1420)
                     /gene="ihfB"
                     /locus_tag="VIY07_00125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008539997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006417 - regulation of translation
                     [Evidence IEA];
                     GO_process: GO:0075713 - establishment of integrated
                     proviral latency [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEY6380196.1"
                     /translation="MIKSELVQRIAAQNPHLYQRDVENIVNAILGEITTAMAKGDRVE
                     LRGFGAFSVKHRPARTGRNPRTGAHVAVDKKSVPFFKTGKEMRERLNRPDTM"
     gene            complement(1440..2414)
                     /gene="sppA"
                     /locus_tag="VIY07_00130"
     CDS             complement(1440..2414)
                     /gene="sppA"
                     /locus_tag="VIY07_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEY6380197.1"
                     /translation="MSLDADAIVDRRRIRRKLTFWRVSALVIALAAIAGAAVMLVPGS
                     RFTTPGAYIARVKVQGLIRTNQDRVEALARLGRSAARAVIVHIDSPGGTTAGSEQLYA
                     ALRELQGKKPMVVVVDGLAASGAYIAALSAEHIVAQETSLVGSIGVLFQYPNFSDVLK
                     TIGIKVEEVKSSPLKAAPNGFEPTSPEARAAIEAIVLDSYSWFKGLVKDRRGLDDGQL
                     TQVSDGRVFTGRQAVGLKLVDSLGNEKAALAWLEKEKKVPANTPVRDYSLQPRFSDLS
                     FLHVAAWTFETLGLNVIANRIEEWGALQAVERLNLDGLLALWHPPSSN"
     gene            complement(2601..4328)
                     /gene="rpsA"
                     /locus_tag="VIY07_00135"
     CDS             complement(2601..4328)
                     /gene="rpsA"
                     /locus_tag="VIY07_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEY6380198.1"
                     /translation="MATATTPSREDFAKLLDESFGSGNLQEGSVIKGKVVALEKEFAV
                     VDVGLKTEGRVALREFSGPGRQADLKVGDEVEVYLERVENALGEAVLSRDKARREESW
                     GKLEKAFNSGEKVQGVIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVTPLMSAPQP
                     FQILKMDRRRGNIVVSRRTVLEETRAEQRQELVQNLEEGQVIDGVVKNITDYGAFVDL
                     GGIDGLLHVTDIAWRRVNHPTEVLNIGQQVKVKIIKINHETHRISLGMKQLLDDPWQG
                     IEGKYPVGARFKGRVTNITDYGAFVELEPGIEGLIHVSEMSWTKKNVHPGKIVSTSQE
                     VEVQVLEVDPVKRRISLGLKQTMRNPWEVFVEKHPPGSTVEGEVKNKTEFGLFLGLDG
                     DVDGMVHLSDLDWKRPGEQVIEEYKKGDIVKAQVLDVDVEKERISLGVKQLAGDPMES
                     AGDLKKGSVVTCEVTEVKESGIDVKIVGTDLIAFIKRADLARDRGEQRPERFSVGQKV
                     DARVTQFDRKTHKVGVSIKALEVAEEKEAIAQYGTADSGASLGDILGAALKQRAGDKP
                     ENETEKAQD"
     gene            complement(4526..5164)
                     /gene="cmk"
                     /locus_tag="VIY07_00140"
     CDS             complement(4526..5164)
                     /gene="cmk"
                     /locus_tag="VIY07_00140"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEY6380199.1"
                     /translation="MIIAIDGPAGSGKGTLGKRLAAHYGLAHLDTGLIYRAVAKALID
                     AGQSPGDVKAAAAAAKALDPSHFDEVELKAHSISEAASIVSAIPQVREALLAFQREFA
                     ARAPGAVLDGRDIGTVICPDADVKIYVTATPEVRARRRSAEYRAQGRNIDEAAVLADI
                     RKRDERDQNRAAAPLRRAPDAHLLDTTHLDIDAAIQAAIDIVEASRSGRGRG"
     gene            complement(5161..6492)
                     /gene="aroA"
                     /locus_tag="VIY07_00145"
     CDS             complement(5161..6492)
                     /gene="aroA"
                     /locus_tag="VIY07_00145"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEY6380200.1"
                     /translation="MQPAETTPLTSRKSGPLQGRARVPGDKSISHRVLILGALTVGET
                     TVSGMLEGEDVLHTADVMQALGARVERTGDRAWRVHGVGIGGFAQPTRKLDFGNSGTG
                     ARLAIGAVAGAPVTATFDGDESLRGRPMRRVLDPLEKMGARVVEMADGGRLPLTLHGA
                     ADPIPIVYEPPVASAQLKSAVLLAGLSAPGETTVVEAEATRDHTERLLKHFGAKITSK
                     AHGEHGRRIVLHGQPELEPANIVVPADPSSAAFPLIAALIVPGSELILDAVMTNPLRT
                     GLLTTLREMGANIEELEKRDDGEEVADLRVRASALKGVDVPAERAPSMIDEYPVLAVA
                     ASFAEGITRMRGLKELRVKESDRLAATADMLRANGVTVEIEADDLIVHGKGRPAGGGE
                     VKTHMDHRIAMAALVMGLGSENPVRIDDSAFIATSFPGFVELMRSIGADLA"
     gene            6657..7067
                     /locus_tag="VIY07_00150"
     CDS             6657..7067
                     /locus_tag="VIY07_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02300 family protein"
                     /protein_id="HEY6380201.1"
                     /translation="MAKPDLGTKRVCPDTGRKFYDLNKNPVVSPYTGKVVPIVAAAPA
                     RVRPEPAAATRASAVAESIVPETADAEFVSLEDAEAEQQGKKPAAAEAPAGEEEEVEM
                     DESLDDAAFIEEQEEGDADVTDIIGESIEKEEEQ"
     gene            7135..7210
                     /locus_tag="VIY07_00155"
     tRNA            7135..7210
                     /locus_tag="VIY07_00155"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7168..7170,aa:Ala,seq:ggc)
     gene            7404..8384
                     /locus_tag="VIY07_00160"
     CDS             7404..8384
                     /locus_tag="VIY07_00160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004433173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6380202.1"
                     /translation="MQGKIALEEHFAIEPTLGDSQVFGSHVWKELSHRLLDVQDTRLR
                     EMDKHGIEMMILSLNAPAIQAIHDTKRAIEIARQANDALADEVHKRPRRFAAFAALPM
                     QDPEAASSELTRCVKELGMVGALVNGFSQVGTPDNVTYYDLPQYREFWRKVEALDVPF
                     YLHPRNPLQSWSKFYDGHSWLLGPNWAFAAETAVHALRLIGSGVFDECSKLKLVLGHI
                     GEGIPVYLWRIDNRNGWMKARHKYPAKHGVAHYFRKHFHLTTSGNFDTPALVNAITVM
                     GVDRVMFSVDWPFEGVDEGSQWFDKAEISEADRVKIGRENAIRLFKLPLQ"
     gene            complement(8387..9496)
                     /locus_tag="VIY07_00165"
     CDS             complement(8387..9496)
                     /locus_tag="VIY07_00165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEY6380203.1"
                     /translation="MPHQPPITALTVRAIRATPVEVPPNFVLGTSVGSFRQVPLLLID
                     LETKEGVTGRSYLFCYLRAAVPAITNLLGEVERVVKDAAINPAGLWAKLAQRFTLIGV
                     QGIVRMAMAGFDVACWDALATAAGMPLATFLNATPRPIPAYNSCGLGLTDDLGALADE
                     AEKLLGRGFRAVKLRLGYPTVQADIAAVHAVRKRIGESVTLMVDYNQALTFEEALQRG
                     RALDAENIYWLEEPIRHSDYAGTSRLARELKVPIQIGENFSLPSDMKTAVAQGASDYV
                     MPDLERIGGVTGWLQAANIAASKRLQMSSHLFPEVSAHLLAATPTCHYLEYVDWADVL
                     LEEPLIIANGYAVVPARPGNGMIWDKSAVEHYRMR"
     gene            9656..>9923
                     /locus_tag="VIY07_00170"
     CDS             9656..>9923
                     /locus_tag="VIY07_00170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HEY6380204.1"
                     /translation="MSRVPSLSSPFLLGFDEIERVLDRVAKGADGYPPYNIERLPRDG
                     KNPERLRITLAVAGFTRDQLDVSVEESQLVIRGRQQDDKTRQYLH"
BASE COUNT         1934 a         3061 c         2979 g         1949 t
ORIGIN      
        1 cgctcgaatc ttgtccggat ccttttcgcc cgggctccgc tcgacgccag aggatacatc
       61 gacacccagt gcgcgcgtta tccggagagc ttccgatacg ttgtcggcat ccagcccgcc
      121 ggacaacatg aacggaacag gagccttgat atcttttagc agtgtccaat cgaacggctt
      181 gccgagcccg ccgggccggg ttgcgtcctt gggtgcacgc gcgtcaaaga tcagacgatc
      241 gacgacctga gcgtattgac gcatcgtgga caggtccttg cgctctgcga caggaagcgc
      301 cttcatgacc ggaaggccaa accgcgtgcg cacagcgacg acgcgctccg gggtctcgct
      361 gccgtggagc tgaagcatgt ccggtttcag cgccccgaca atgtcgagca gggtgtcgtc
      421 gttggcgtcg acggtgagcg cgactttgcc agcgcgacct tgcacgcgct ggccaagcgt
      481 gcgcgccgcc tcgaggccaa ggtggcgcgg gctcggcgcg aagaacacga acccaaccaa
      541 atcggccccg gaatcaagcg ctacatcaag cgcttgcggg gtcctgaggc cgcagatttt
      601 gaccgacaaa ggcattatga agcgcgttct agcgccttct tgttttgccc gcaaagccga
      661 accccgggac tgagttaagg aattggtggc ggaatagcgg tgtagggggc cggatcggcc
      721 gatgtttgcg acgatcctgg cgcaaagcgg cggcgtatcg agtccagttc ctgatgcagc
      781 gaccggacct cgccatcaag cttgcgggcg ctccgtcgcc accgggtctg gccgatccat
      841 acggcggcgc ctccgatcag cacgccaaga atcatcagca cgaagatgag cacgaacagc
      901 ggcaaggtcg ctgcataggc agggcttgtc gacgaaaatg ggtcaaaaga aaccgtcacc
      961 gactgccggt tagcgactgc aaaggccaca atgactatcg ccagcggcag aacaatcagc
     1021 atcgaaacga ttctgcggag catctttcga taagcccgtc tgaaatgtca tggccgggac
     1081 gaacccggcc atgagcatag cattccgata gtcggaggaa ccagaagccc tacatcgtat
     1141 ccggtcggtt gagccgctcg cgcatttcct tgcccgtttt gaaaaacggc acagactttt
     1201 tgtcgaccgc aacatgggcg ccggtacgcg ggttccgccc ggtacgggcc ggccggtgct
     1261 tgaccgagaa ggcgccgaag ccacgcagtt cgactcggtc gcccttcgcc attgcggttg
     1321 tgatctcgcc aaggatggcg ttgacgatgt tctcaacgtc gcgctgataa agatggggat
     1381 tctgggccgc aatgcgctga acgagttctg acttgatcat cgatgccgcc cctacccagt
     1441 caattcgacg acggagggtg ccaaagcgcc aagagaccgt caagattgag tcgctcgacc
     1501 gcttgcagcg caccccactc ctcgatgcgg tttgcaatga cattcagccc caacgtctcg
     1561 aacgtccagg cggcgacgtg caggaaggaa aggtcactga agcgcggttg cagtgaatag
     1621 tctcgcaccg gggtgttcgc cggcaccttt ttttccttct caagccacgc caaggcggcc
     1681 ttttcatttc caaggctatc cacaagcttg aggccaaccg cctgccggcc ggtgaaaaca
     1741 cggccatcgg acacctgggt gagctggccg tcgtccagtc cgcgtcgatc cttcacgagg
     1801 cctttgaacc agctgtagga atcgaggacg atcgcttcaa ttgcggcccg cgcttcgggg
     1861 ctggttggct cgaatccatt gggcgcggcc ttcagcggcg aggatttcac ctcttcgacc
     1921 ttgatgccga ttgttttgag cacgtcggaa aaattcggat actgaaagag caccccgatc
     1981 gaaccgacca aagacgtctc ctgcgccacg atgtgctcag ccgagagcgc ggcgatatag
     2041 gcgccggatg cggcaagtcc gtcgacaacg acgaccatgg gcttcttgcc ctgtagttca
     2101 cgcaaggcgg cgtaaagctg ctcggaaccg gcggtcgttc caccgggact atcaatgtgg
     2161 acgatcacgg cacgcgcggc agagcgtcca agacgggcca gtgcctcgac gcgatcctga
     2221 tttgtgcgga ttaggccctg aaccttgacc cgcgcgatat aggccccggg agtcgtgaag
     2281 cggctacctg gcacaagcat gacggctgcg cccgcgatcg ccgccaaggc aatcaccagc
     2341 gcactgacgc gccaaaaggt aagcttgcgc cttatccggc ggcgatcgac gattgcatcc
     2401 gcgtcgagcg acatggcttc actccttcag tgaatcgagg ccggatccta tccggcaatt
     2461 gcgagcttgg ctcgctcatc caaacgactc tcgacaaagt gatcttacaa caacggatgc
     2521 ccctggggat cgcccagggg catcgcattt agttcaagtc ccaatcctca gtcttgggac
     2581 agttgggctc agccctaggc tcagtcctgt gctttttcgg tttcattttc aggcttgtcg
     2641 cctgcccgct gcttgagcgc ggcacccagg atgtctccaa gcgaggcgcc ggaatcggca
     2701 gtgccatact gggcgatcgc ttctttctcc tcggcgacct caagcgcctt gatggaaacg
     2761 ccgaccttgt gcgtcttgcg atcgaactgc gtgacgcgcg cgtccacttt ctgcccgaca
     2821 gagaaacgct cgggacgttg ctcgccacga tcgcgcgcca ggtccgcgcg cttgataaag
     2881 gctatcagat cggtgccgac gatcttgacg tcgatgcctg attctttcac ctcggtcacc
     2941 tcgcaggtga caactgaccc cttcttgaga tcgcccgccg attccatcgg atcgccggcc
     3001 agttgcttca cgccgagtga aatacgctct ttctcgacgt caacatcgag gacctgtgct
     3061 ttgacgatgt cgcctttctt gtattcctcg atcacctgct caccgggacg tttccagtcc
     3121 agatcggaca ggtggaccat gccgtcgaca tcaccatcga gcccgagaaa cagtccgaac
     3181 tctgttttgt tcttgacttc gccttcgacg gtggagcccg gcgggtgttt ctcgacaaac
     3241 acctcccatg gattgcgcat ggtctgcttc agaccgaggg agatgcggcg ttttacgggg
     3301 tcgacctcga ggacctgtac ttcgacttcc tgcgaggttg agacgatctt gcccggatga
     3361 acgttctttt tcgtccagga catttcggac acgtggatca gcccttcgat gcccggctcg
     3421 agctccacga acgcaccgta gtccgtgatg ttggtgacgc ggcccttgaa acgtgccccc
     3481 acgggatatt tgccctcgat gccctgccac gggtcgtcga gcagctgctt catgccaagg
     3541 gaaatgcggt gggtttcatg gttgatcttg atgatcttca ccttcacctg ctgaccgatg
     3601 ttgagcacct cggtcggatg attgacgcgc cgccacgcta tgtcggtgac gtgcagcagg
     3661 ccatcgatgc ctccgagatc cacaaacgcg ccgtagtcgg tgatgttctt gaccacgccg
     3721 tcgatgacct ggccttcctc gaggttctgc accagctcct gacgctgttc ggcgcgagtc
     3781 tcctcaagca cggtgcggcg ggaaacgacg atgttgccgc ggcggcgatc catcttcagg
     3841 atctggaacg gctgcggggc actcatgaga ggagtgacat cgcggatggg ccggatgtcc
     3901 acctgcgatc gcggcaggaa tgccacggca ccatcgagat caaccgtgaa gccgcccttg
     3961 acctgattga agatgacgcc ttggaccttc tcgccgctgt tgaatgcctt ctccagcttg
     4021 ccccagcttt cctcgcgtcg cgccttgtcg cgggagagca cagcctcacc gagcgcattc
     4081 tccactctct caagatagac ctcgacctcg tcaccgacct tgaggtcggc ttgccgtccg
     4141 gggccgctga attcgcgtag cgccacgcgt ccctcggtct ttaagccgac gtcgacgacg
     4201 gcaaattcct tttcaagggc gacgaccttt cccttgatga cggaaccttc ctgcagattc
     4261 ccgctgccga aagattcgtc gagcagcttg gcgaagtctt cacgcgaggg tgttgttgcg
     4321 gtggccatgg actctcctgt ttgcggcgcg ccggggtttg aatggcgttc caaatgcacg
     4381 ggccgagggt cccgcagacc aacggcgacc tccgggaatc ctccgggcgg ccggcgctaa
     4441 aaccgtgctt tcggaacgat ggttctatca ggcgcgcgtt acgcagagac tcgaacggga
     4501 ctttgtcctc caacacgagg ggtgatcagc cacgccctcg gcccgatcgg ctagcctcga
     4561 cgatgtcgat ggcggcctgg atggctgcgt ctatatccaa atgcgttgta tcgagcaagt
     4621 gcgcatccgg cgcccgtctt aaaggcgcgg cagcgcgatt ttggtcgcgt tcgtcccgct
     4681 tgcggatatc ggcgagcaca gcagcctcgt caatattgcg accctgcgcc ctgtactcgg
     4741 ctgagcgccg gcgggcgcgg acctcgggcg tcgccgtgac gtaaatcttc acatccgcgt
     4801 ccggacaaat gacggtgccg atgtcccggc cgtcgagcac ggcgcccggc gcccgggcgg
     4861 cgaattcgcg ctggaaggca aggagcgctt cgcgcacctg gggaattgcc gaaacgatcg
     4921 acgcagcctc gctgatgctg tgggccttca gctcgacctc atcgaaatgc gacggatcaa
     4981 gtgcttttgc cgcggcggcc gccgccttca catcgccggg actttgcccg gcgtcgatca
     5041 atgccttggc caccgcgcga tagatcagcc cggtgtcgag atgcgccaat ccatagtgag
     5101 cggcaagccg cttgccgagt gtcccttttc cggagccagc cgggccatca atggcgatga
     5161 tcatgcgaga tccgcgccga tcgagcgcat caattcgaca aagccgggaa agcttgtggc
     5221 gatgaatgcg ctgtcatcga tacgcacggg attttcgctg cccaaaccca ttaccagcgc
     5281 cgccatggca atgcgatggt ccatatgtgt tttgacttca ccgccgcccg ccggacggcc
     5341 tttgccatgg actatgagat cgtcagcttc gatctcgacc gtgacgccgt ttgcgcgcag
     5401 catatcggcg gtcgcggcca gccggtccga ctccttcaca cgtaattctt tcaggccccg
     5461 catgcgcgtg atcccttccg cgaaggatgc cgcgacggcc agaaccggat attcatcgat
     5521 catcgagggc gcgcgttctg cgggaacgtc cacgcccttg agcgcggagg cgcgcacgcg
     5581 caggtcggct acctcttctc cgtcgtcgcg cttttccagt tcttcgatgt tcgcgcccat
     5641 ttcgcgcaat gtggtcaaca acccggtgcg cagcggattt gtcatcacgg catcgaggat
     5701 gagctccgag ccgggcacga tcagcgcggc gatcagcgga aacgccgccg aggagggatc
     5761 cgccggtacc acaatattcg ccggctcgag ctcgggctgt ccgtgcagga caatacggcg
     5821 gccatgctcg ccgtgagcct tgctcgtgat cttcgcgccg aaatgcttca acaaccgttc
     5881 ggtgtgatcg cgtgttgcct cggcctcgac cacggtcgtc tcacccggtg ccgacaggcc
     5941 cgccagcagc accgccgact tgagctgcgc ggatgccacg gggggttcgt agacgatcgg
     6001 aatcggatcg gccgctccgt gcagcgtgag cggaagtcgc ccgccgtccg ccatctcgac
     6061 aacccgcgcg cccatctttt ccaacggatc gagcacgcgt cgcatcggcc ggccacgcag
     6121 ggattcgtcg ccgtcgaatg tcgccgttac cggcgcgccc gctaccgcgc caatcgcaag
     6181 ccgcgcgccg gtgcccgaat tgccgaaatc gagcttgcgc gtcggttgag cgaagccccc
     6241 aatgccgacg ccatgaacgc gccaggctcg gtctcccgtg cgttccacgc gtgcgccgag
     6301 agcctgcatc acatcggcag tgtgcagcac gtcctcgcct tcgagcatgc ccgagacggt
     6361 cgtttcgccg accgtgagag ccccgaggat cagcacgcgg tgcgaaattg acttgtcgcc
     6421 cggcacccgg gcccgccctt gcaaggggcc gctcttgcgg gaggtcaacg gcgttgtttc
     6481 tgcaggctgc aacgggcggt atcctcagga actgcgccct cctaccatgc acctgcgcgc
     6541 gccgtcatcc tcgcgatttt ggggtcttga ggtggcgctg cgctattgac agcagccttg
     6601 caactagcca agtgaagcac cgatttgaaa ggaccctttc cctaggaacc ccgactgtgg
     6661 ctaaacccga tctcggcacc aagcgcgtct gtcccgacac cggtcgtaaa ttctacgatc
     6721 tgaacaagaa cccggtggtt tcaccgtata cgggcaaggt tgtaccgatc gttgctgccg
     6781 cacctgcacg cgtccggccc gagcccgctg ctgcgacaag agcatcggcg gtggccgaat
     6841 ccattgtccc cgagacggcc gatgccgaat tcgtatcgct cgaggatgca gaggccgaac
     6901 aacagggcaa gaagcctgcg gcagcagagg caccagcggg cgaagaggaa gaggtcgaga
     6961 tggacgagag cctcgatgac gcagcgttta tcgaggaaca ggaagagggc gatgccgatg
     7021 tgaccgacat catcggcgag tcgatcgaga aggaagaaga gcaatagccg ggagtcggac
     7081 atcgggcttc agatcaaaac ctgatttacc gatttccggc tcctgatccc tgatggggcc
     7141 atagctcagt tgggagagcg cgtgaatggc attcacgagg tcgggggttc gactccccct
     7201 ggctccacca agctccgcgg tctttggccg gctcgcgagc tacgagaaat ttctcacagg
     7261 tgcaaatgct tgctttgaag ctcatgtcgc ccttagcgac aaaaaacagg ctacaattcc
     7321 gaaagatgct tgaagtctcc ttcctgccgc gcattttcaa aaagcggctc tgaagacatt
     7381 tgccccaagg agcggaagca cccatgcaag gcaagatcgc gctcgaggag catttcgcaa
     7441 tcgagcctac gcttggcgat tcacaggtgt tcgggtcaca cgtctggaag gagctgagcc
     7501 accgcctgct tgacgtccag gacacgcggc tgcgggagat ggacaagcac gggatcgaga
     7561 tgatgatcct gtcgctcaat gccccggcca tccaggctat ccatgacaca aagcgcgcca
     7621 tcgagatcgc ccggcaggcc aacgatgccc ttgccgacga ggttcacaag cgtccgcgcc
     7681 ggtttgccgc tttcgcggcg ctgccgatgc aggatccgga agctgcgagt tccgagctca
     7741 ctcgctgtgt gaaagaactg ggcatggtcg gtgcgctggt caacggcttc tcgcaggtcg
     7801 gcacccctga caacgtgact tattacgacc tgccgcaata ccgggaattc tggcgcaagg
     7861 tagaagcgct cgacgtgccg ttctatctgc atccgcgcaa tccgctgcag agctggagca
     7921 aattctatga cggtcacagc tggctgcttg ggccgaactg ggcgtttgcg gcggaaaccg
     7981 ccgtgcatgc gctgcgtctg atcggcagcg gagtattcga cgagtgttca aaattgaagt
     8041 tagtgctcgg ccacatcggt gaaggcattc ctgtgtatct ttggcgcatc gacaatcgca
     8101 atggctggat gaaggcgcgg cataaatatc ccgccaaaca cggtgtggcc cattacttcc
     8161 gcaagcactt ccatctcacg acgtcgggca acttcgacac gcccgcactc gtcaatgcga
     8221 taaccgtgat gggcgtggac cgcgtgatgt tttcggtcga ttggccgttt gaaggcgtgg
     8281 acgaaggctc gcagtggttc gataaggcgg agatcagcga agcggatcgc gtcaaaatcg
     8341 gacgcgagaa tgccatcaga ttgttcaagc tgccgctgca gtaagcctag cgcatccggt
     8401 agtgctcgac cgcgcttttg tcccagatca ttccattgcc gggccgggcg ggaacgacgg
     8461 catagccgtt ggcaattatc agcggctctt cgagcagaac gtccgcccag tcgacatatt
     8521 cgagataatg gcaggtcggg gtggcggcga gcagatgcgc acttacttcc ggaaagagat
     8581 gcgatgacat ttgaaggcgc ttgctggcgg caatgttcgc ggcctgaagc cacccggtga
     8641 ccccgccgat gcgctcaaga tcgggcatca cgtagtcgga agcaccttgt gcgactgcgg
     8701 ttttcatatc cgatggcaaa gaaaaattct cgccgatttg aattgggact ttcaattcgc
     8761 gggcaagtct tgaagtgccg gcatagtcac tgtggcggat tggctcctcg agccagtaaa
     8821 tgttttcggc atcgagcgcc cggccacgct ggagggcttc ctcgaacgtg agtgcctgat
     8881 tgtagtccac catcagcgtc acgctctcgc cgatgcgttt gcgcaccgca tgcaccgccg
     8941 cgatatcggc ctgaaccgtc ggatagccga gtcgcagttt gaccgcgcgg aaacctcgtc
     9001 cgaggagttt ctccgcttcg tccgcaagcg cgcccagatc atcggtaagc ccaagtccgc
     9061 aactgttgta ggcagggatg gggcgtggtg tcgcattcag aaaggtggcg agcggcatac
     9121 ccgccgcggt agcaagagcg tcccagcagg caacgtcgaa gccggccatg gccatgcgca
     9181 cgatgccttg tactccgatc aacgtgaaac gctgggcaag cttcgcccat aggccggccg
     9241 gatttatcgc ggcatccttg acgacacgct cgacctcgcc gagcaagttc gtgatcgccg
     9301 gcacggccgc gcgcaaatag cagaacaagt aactgcggcc tgtaactccc tccttggttt
     9361 cgagatcgat cagcagcagg ggcacctggc ggaacgaccc tacactggta ccgagcacaa
     9421 aattcggggg cacctcgacg ggggttgcgc ggatagcgcg gaccgtcagg gcggttatgg
     9481 ggggctgatg aggcatgaaa acccgcttaa acggcgatta tatcgtgttc cagcccgaat
     9541 tcttgaacct ttaaccaggg ctgcccatat tagcagcgac cggccgacag tttcggacgg
     9601 ttggggcgcc gaaagggtcc cgtcaaagtc gcttcaagcg agggctttga gatcaatgtc
     9661 gcgagttccg tccctgtcca gcccgttcct cctgggtttc gacgaaatcg agcgcgtgct
     9721 cgatcgtgtc gccaaggggg ccgacggcta cccgccttac aatatcgagc ggctgccccg
     9781 cgatggcaaa aacccggaac ggctgcgtat cacgcttgcc gtcgccggtt ttacccgcga
     9841 tcagctcgat gtgagtgtcg aggaaagcca attggtgatc cgcggcaggc aacaggacga
     9901 taaaacccgt cagtacctcc acc
//
LOCUS       DATDHO010000008         2309 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_99388, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000008 DATDHO010000000
VERSION     DATDHO010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_99388"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..312)
                     /locus_tag="VIY07_00175"
     CDS             complement(<1..312)
                     /locus_tag="VIY07_00175"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018210774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY6380205.1"
                     /translation="MATGSNGAGRSNVPQRRYLTILFCDLVGYTELSERLDPEDLRDL
                     QLQYQRLALTVMERYGGFVAQFSGDGVLVYFGYPTAHENDAERAVRAALELCDRLEEL
                     NA"
     gene            653..2218
                     /locus_tag="VIY07_00180"
     CDS             653..2218
                     /locus_tag="VIY07_00180"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY6380206.1"
                     /translation="MQPISGLHVASLIDPQRFDVRLYHEDWHGPFNPFQGEKYDLVFL
                     TGLQPDFDRMRQLAYFFKRGGAKVVAGGSICTMFPEFAVQFFDAVCAGGVDSVRQVVA
                     DFERGELKPIYRSPTMQISAYAVDYSLLARSGISPSVHLMEASRGCSFRCSFCVIPQE
                     VGGHAKYSLANLSAAIDNALATSPFFSFRRWYPTIIFLDNNFSDDREYMLQVCELMRT
                     QPKIRGWAALVTQNIMHDRDLIKYLADAKCISLFFGLESFDQVLLKKYKKKQNLGRTH
                     NIIDDIAFAESNGIGIGYGYLFDPRLQTVQQMADQIRMIGQHPALPMPVYLSVVAPLA
                     GTEGFWGDLASGQLRPNLRLRDLDGETIAYSNLADDTGAIVTFLEKIFRRPWTIVSRL
                     SIFIKTMRRIMRSGTYDPIHWYIIAAANLHCFVWSSTSPAQARTYLAGSELLDPQYDE
                     YPADISKEDFRHYFEPIALTDAAGRPADWLKPYIPQSRKKPRPVLSDAREAVSAHALV
                     RTKGEIAARQKLH"
BASE COUNT          503 a          690 c          604 g          512 t
ORIGIN      
        1 cgcattgagc tcctccaacc ggtcgcagag ctcgagcgcg gcacgtaccg ctctttcggc
       61 atcgttttcg tgagctgtcg gatagccaaa atagaccagc acgccgtcac cgctgaattg
      121 agcgacgaag ccgccgtaac gctccatgac cgtcagtgca agccgctgat attgcagctg
      181 gagatcccgc aggtcctcgg gatccagtcg ctccgacagc tcggtgtagc caacaaggtc
      241 gcaaaagagg atcgtcaggt aacgacgctg cggtacattg gaccggcctg ccccattaga
      301 cccagtcgcc atcttcacgc cttgcggatg agcattttca agcacttcat ccgtgcctac
      361 tgatgtgttc ttccccagtc gccattcaac gctgggactc tgcgcagatt gtaagctagg
      421 ctggagccca ccgctagcta agcccggtgt cgcagtaacc ggcggcccgc atttattgct
      481 gtacttaaga gattatcgag agggcgcgaa gatgcggttc ttgcggtcga ccgggctaca
      541 ccgcccattc cgggcggcta attcatctcc cgataggtcg caaaaacagc gggcccttgt
      601 catttgcacg catcttcgac ctgggcgtgt caagaggcgg tccagctacg ttatgcagcc
      661 tataagcggc cttcatgtcg cttctctcat tgacccccaa cgtttcgatg tccgtctgta
      721 ccatgaagac tggcatggtc cgttcaatcc ctttcagggt gaaaaatacg atcttgtttt
      781 cctgaccggc ctgcaaccgg acttcgaccg catgcggcag ctcgcatatt ttttcaaacg
      841 cggtggcgcc aaggtggtcg caggcgggag catttgcacg atgtttccgg aattcgccgt
      901 acaattcttt gatgccgtgt gtgccggtgg cgtcgacagc gtgcggcagg ttgtcgccga
      961 ttttgagcga ggcgaactca agcccatcta caggtctccg acgatgcaga tctcggctta
     1021 cgccgtggac tatagtctgc tcgcgcgcag cgggatcagt ccgagcgtcc acctcatgga
     1081 agcatcgcga ggctgcagct tccgatgcag tttttgcgtg ataccccagg aagtcggcgg
     1141 ccatgccaaa tacagtcttg ccaacctttc cgcggcaatt gacaacgcgc ttgctaccag
     1201 cccgtttttc agtttccgcc gctggtatcc gacaatcatc tttctggaca ataatttctc
     1261 cgacgaccgc gaatacatgt tgcaggtctg cgagctgatg cggacgcaac ctaaaattcg
     1321 cggatgggct gctctcgtca cgcaaaacat catgcacgat cgcgatctca tcaaatattt
     1381 ggccgatgcc aaatgcatct cgctcttttt cgggcttgaa tcgttcgacc aagtgctgct
     1441 gaaaaaatat aaaaaaaagc agaatcttgg tcgcacccac aacattatcg acgacatcgc
     1501 ttttgccgaa tcgaatggca tcggcatcgg ctacggctat ctctttgatc cacggctgca
     1561 gaccgtccaa cagatggcag atcagatccg catgattgga caacacccgg cgcttccgat
     1621 gcccgtttat ctgagcgtgg tggctccgct cgccggcaca gagggcttct ggggtgacct
     1681 ggcttcgggt cagcttaggc caaacctgcg cctgcgcgat ctcgacggtg agactattgc
     1741 ctattcaaat cttgccgatg acaccggagc gatcgtgacc ttcctggaga agatttttcg
     1801 tcgcccctgg acaatcgtca gccggctttc gatcttcatc aagacgatgc ggcgaatcat
     1861 gcggtcgggg acatatgatc caattcattg gtacatcatt gcagccgcca atctgcactg
     1921 ctttgtctgg tcgagcacct cgcccgctca ggcgcgaacg tatctcgcgg gaagcgaact
     1981 gctcgatccg cagtacgacg aatatcctgc cgatatttcc aaagaagatt tccgacacta
     2041 tttcgagccc atcgcattga ccgatgcggc agggcgtccc gccgattggc tcaagcctta
     2101 cataccccaa tcacgcaaaa aaccgcggcc cgttctcagc gacgcgcgcg aggcggtatc
     2161 cgcgcacgca ctggtcagaa caaaaggcga gatcgccgcc cggcaaaagc ttcactaatc
     2221 gtcacgtgga agcaaacccg gcgagtagat caaaaacaac gacaaagaaa cggcgattcc
     2281 cgccggtata ggcctaacca gccgctttt
//
LOCUS       DATDHO010000009         4743 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_347038, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000009 DATDHO010000000
VERSION     DATDHO010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4743
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347038"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..125)
                     /locus_tag="VIY07_00185"
     CDS             complement(<1..125)
                     /locus_tag="VIY07_00185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-binding factor A"
                     /protein_id="HEY6380207.1"
                     /translation="MARRKQHQRDSSQGVSQRQLRVGELVRHALAEMLTRGDVHDP"
     gene            complement(279..2837)
                     /gene="infB"
                     /locus_tag="VIY07_00190"
     CDS             complement(279..2837)
                     /gene="infB"
                     /locus_tag="VIY07_00190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEY6380208.1"
                     /translation="MSETKNPGEKKLSVSGKTLTLKPRTETGVVRQSFSHGRSKQVVV
                     EKVKRRVVGGPSEAKAEAAPAAEAKKAPVGKAGGASSRGLTAAEAKPKPSGVVLRTLT
                     EEERTARAHALADSRVREAEERRIAEEEGRRRASREATDRSEREAAEARKRDEEERRK
                     HDEETKRKAGEVAKKRFGEEETRRPSARLALEADEDEAPARSRRGGAARPAAARPTPR
                     GGGEKQRGRLTVINALRQDDVRERSVASFRRRVQRLKGQTSAEPKEKLLREVTIPEAI
                     TIQDLANRMSERAVDVIRLLMKQGQMATINDVIDADTAQLIAEEMGHTVRRVAEADVE
                     EGLFDVADDPAQLRSRAPVVTVMGHVDHGKTSLLDAIRSSEVAAGEAGGITQHIGAYQ
                     VNSPSGAKVTFIDTPGHAAFTAMRARGAKVTDIVVLVVAADDGVMPQTVEAIHHAKAA
                     KVPIIVAINKIDKPDAKPERVRTDLLQHEIQVEAMGGEVVDVEVSATKKMNIDKLLEM
                     IGLQAEILDLKANPNRPAEGTVIEAKLDRGRGPVATVLVQRGTLHPGDIVVAGAEWGR
                     VRALVSDTGEPAQSAGPSMPVEVLGFSGTPDAGDRLAVVDNEARAREVTDYRARQKRE
                     KMAARATGMRGSLEQMMAQAKTSGRKEFPLVVKADVQGSVEAIVGALDKLATDEVAAR
                     VLHSGVGGISESDVTLAEASGVPIIAFNVRANKEAREAAERAGIEIRYYNIIYDLVDD
                     VKRAMSGLLAPTLRETMLGNAQILEIFNISKVGKIAGCKVTDGTVERGANVRLIRDNV
                     VIHEGKLSQLKRFKDDVREVGAGMECGMAFENYQDMRQGDVIECYRVEQIQRSL"
     gene            complement(2852..3535)
                     /locus_tag="VIY07_00195"
     CDS             complement(2852..3535)
                     /locus_tag="VIY07_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEY6380209.1"
                     /translation="MLAVAQDGDLDRGTRVAPHSERTCALTREVKSRADLIRFVVGPS
                     GEAVPDVKRKLPGRGIWITGTRAAIEEAVRRNVFGRGFKRDVRVARDLAAQTEEMMER
                     AALDALAIAGKAGKVITGFSRVETAIGRDDLLALLHAADAAEDGKRKLTDALRRKRAG
                     ESSEIALIDAFTGAQLDLALSRPNVVHAALLAGPGSGTFLTRIERLTRFRTGISPDAL
                     KGHAPAGGA"
     gene            complement(3551..>4743)
                     /gene="nusA"
                     /locus_tag="VIY07_00200"
     CDS             complement(3551..>4743)
                     /gene="nusA"
                     /locus_tag="VIY07_00200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HEY6380210.1"
                     /translation="IFDIVNGIVKRVEYGNVIVDLGRGEAIVRRDELLPRETFRNGDR
                     IRAYIYDVRREPRGPQIFLSRTHPQFTAKLFAQEVPEIYDGIVEVKAVARDPGSRAKI
                     AVISRDSSVDPVGACVGMRGSRVQAVVNELQGEKIDIIPWSPDIATFVVNALAPAEVA
                     KVVLDEDKERIEVVVPDQQLSLAIGRRGQNVRLASQLTGWDIDILTEQEESERRQTEF
                     ENRTKVFVDALNLDEVVGQLLASEGFGSIEELAMVDQKEIASIEGFDEDTARELQERA
                     REYIAAQEAELDNKRKALGVEDALKDVPGITTKMLVALGENGVKTVEDLAGCATDDLV
                     GWTERKDGETKHESGFLEDFHLSRGDAEAMIMQARLKAGWVTEAELASPASAEPAEEA
                     AQHA"
BASE COUNT          786 a         1547 c         1390 g         1020 t
ORIGIN      
        1 ggatcatgta catcgcccct ggtcagcatc tccgcgagtg catgccgcac cagctcaccg
       61 acacgaagtt gccgctggga gactccctgc gatgaatcgc gctgatgttg tttgcggcgt
      121 gccatagctt caaaaactct cattcgtcat gcccggcctt gtggcgggca tccacgtctt
      181 ccttcaccga aggaaggtta gtcgtggatg accgggacga gcccggccat ggggggaaat
      241 ggatggcgcg ttctaacctg cacgcttgag acttggactc acagcgagcg ttgaatctgc
      301 tccacccggt aacattcgat tacgtcgcct tgccgcatgt cctggtagtt ttcgaaggcc
      361 atgccacatt ccatgccggc gccgacttcg cgcacgtcat ccttgaaacg cttgagctgc
      421 gacagcttgc cttcgtgaat cacaacgttg tcgcggatca atcgtacatt ggcaccgcgc
      481 tcgacggtgc cgtcggtgac cttgcagccg gcaatcttgc cgaccttcga gatgttgaag
      541 atctccagaa tctgcgcgtt accgagcatc gtttcgcgca gcgtcggagc cagcaagccg
      601 gacatcgccc tttttacatc gtcgaccagg tcgtagatga tgttgtagta gcgaatctcg
      661 atgccggcgc gctcggctgc ctcacgcgct tccttgttgg cgcggacgtt gaaggcgatg
      721 atcggaacgc cggaggcttc cgcaagcgta acgtccgatt cagaaattcc cccgacgcct
      781 gaatgcagca cgcgcgccgc aacttcgtcg gtcgccagct tgtcgagggc accgacgatt
      841 gcttcgaccg acccctgcac atccgcctta accaccagcg ggaattcctt gcgacccgac
      901 gtcttggcct gcgccatcat ttgctcgagc gagccgcgca tgccggtcgc acgcgccgcc
      961 atcttctcgc gcttctgtcg agcacggtag tcggtaacct cgcgggcacg tgcttcgtta
     1021 tcaaccacag ccaggcggtc gcccgcgtcg ggcgtaccag aaaaaccaag cacttccacc
     1081 ggcatcgatg gtcccgcgct ctgcgcaggc tcgccggtgt cagacaccag tgctcgcacc
     1141 cgaccccatt cggcgcccgc caccacgatg tcgcccgggt gcagggtccc gcgttgaacg
     1201 aggacggtcg cgacgggacc gcggccgcgg tcgagcttcg cttcgatcac ggtaccttca
     1261 gccggccgat ttggattggc cttgaggtcg aggatttctg cctgcaagcc gatcatctcg
     1321 agcagcttgt cgatattcat cttcttggta gcggaaacct cgacgtccac gacctcacca
     1381 cccatggctt cgacttggat ttcgtgctgc aaaagatcgg tgcgcacgcg ctccggcttt
     1441 gcgtcgggtt tgtcgatctt gttgatcgcg acgatgattg gcactttcgc cgccttggcg
     1501 tgatgaatcg cctccaccgt ctgcggcatt acgccgtcat cggcggcgac gaccagaact
     1561 acgatgtcgg tcaccttggc gccccgcgcc cgcattgctg taaacgcggc atggccgggc
     1621 gtatcaatga aggtgacttt tgcgccggag ggcgagttta cctgataggc gcctatatgc
     1681 tgggtgatgc cgccagcttc gcccgccgct acttcagagg aacgaatggc atcaaggagc
     1741 gaagtcttgc cgtgatcgac gtggcccatg accgtgacga ctggcgcgcg ggaccggagc
     1801 tgcgcgggat cgtctgcgac gtcgaacaat ccctcttcta cgtcggcttc ggccacgcgg
     1861 cggactgtat gacccatttc ctcggcgatg agctgggccg tgtcggcatc gatgacatcg
     1921 ttgatcgtag ccatctggcc ttgcttcatc agcagccgga tgacatcgac ggcacgttcg
     1981 gacatccggt tggcgagatc ctgaatcgtg atcgcctccg ggatcgtaac ttcccgaagc
     2041 agcttttcct ttggctcggc gctggtctgg cccttaaggc gctggactcg acggcggaag
     2101 gaggcaaccg aacgctcacg cacgtcatcc tgacggagcg cgttgatcac cgtcagacgg
     2161 ccccgctgtt tctcgccgcc tccgcgtggc gtgggccgcg ctgcagccgg tcgggcggcg
     2221 ccaccgcgcc gtgatcgagc gggcgcttcg tcttcatcag cttccagcgc aagtcgtgcc
     2281 gacggtcttc gggtttcttc ttccccgaag cgcttcttcg cgacttcccc ggctttgcgt
     2341 ttggtttctt cgtcgtgctt gcgacgctct tcttcgtcgc gcttgcgagc ttccgcggcc
     2401 tcacgctccg agcgatcggt agcctcacgg ctcgctcggc gccgcccctc ttcctcggca
     2461 atacggcgct cttctgcttc gcgtacgcgc gagtcggcaa gcgcatgagc acgagcggtg
     2521 cgctcttcct cggtcaaggt ccgcagtaca acgccggagg gctttggctt cgcttcagcc
     2581 gccgtcaggc ctcgactgct cgcgccacct gcttttccga cgggtgcttt cttcgcttcg
     2641 gctgccggcg cggcttcggc cttggcctcg cttggcccgc cgacgacacg acgtttgacc
     2701 ttttcaacga cgacctgctt gctgcgcccg tggctgaaac tttggcgcac tacgcccgtc
     2761 tcggtgcgtg gcttgagcgt cagcgttttg ccggagacgc tgagtttttt ctcgccgggg
     2821 tttttggtct cgctcattcc gtaccatttc cttaggcgcc gcctgcgggc gcatgtcctt
     2881 taagtgcatc gggcgaaatt ccggtccgaa aacgcgtcaa acgctcgatc cgcgtaagaa
     2941 atgtcccgct tccgggtccc gcaagcaggg ctgcatgtac cacatttgga cggctcaatg
     3001 ccaaatccaa ttgcgcgccg gtaaaggcat caatcaacgc gatttccgac gattcccccg
     3061 ctcttttgcg gcgcagggca tcagtcagct tgcgtttgcc gtcctcggca gcatcggcag
     3121 catgtaatag cgccagaaga tcgtcccggc cgatcgcggt ctctaccctg gaaaagccgg
     3181 taatgacctt gccggccttt ccggcgatgg ccagcgcgtc gagagcggcg cgttccatca
     3241 tctcctcggt ttgcgctgcg agatcgcggg caacccgcac gtcgcgcttg aacccgcggc
     3301 cgaacacgtt tcgcctgacg gcttcctcga tcgcggcgcg ggttcccgta atccagatgc
     3361 cacgtccggg cagcttgcgc ttgacgtcgg ggaccgcctc gccggacggc cccaccacga
     3421 aacggatcaa atctgctcga gatttgactt cccgggtgag cgcgcacgta cgttcgctat
     3481 ggggggcaac acgggttccc cgatcgagat cgccgtcttg cgcgactgca agcatggtgg
     3541 tgccgatctc ctatgcgtgc tgtgcagctt cttcggccgg ttctgcagat gccggcgatg
     3601 caagttctgc ctcggtcacc catccagcct tcagccgcgc ctgcatgatc atggcttcgg
     3661 cgtctccacg ggaaagatgg aagtcttcaa ggaaacccga ctcgtgcttg gtctccccgt
     3721 ccttgcgttc ggtccagccg acgaggtcat cggtggcgca accggcgaga tcttccaccg
     3781 tcttcacacc gttctcgccg agagcaacca gcattttggt cgtgataccg ggcacgtcct
     3841 tcagtgcgtc ctccactccc agcgctttcc gcttgttgtc gagctcggct tcttgtgcgg
     3901 cgatgtattc acgcgcacgt tcctgaagct cacgcgcggt gtcctcgtcg aagccttcga
     3961 tggaggcgat ttccttttga tcgaccatcg ccagctcctc gatcgagccg aaaccttctg
     4021 aagcaagaag ctgtccgacc acttcgtcca gattgagcgc gtcgacgaaa accttggtgc
     4081 ggttctcgaa ctcggtttga cggcgctccg actcttcctg ctcggtcagg atatcgatgt
     4141 cccagcccgt cagttgagag gcgaggcgca cgttctgacc gcgtctgccg atcgccagcg
     4201 aaagctgctg gtccggcacg accacctcga tgcgttcctt gtcttcatca agcacgacct
     4261 tggccacctc ggcaggcgcc agcgcgttga cgacgaaagt ggcaatgtcg ggcgaccacg
     4321 ggatgatgtc gatcttttcg ccctgcaatt cgttcaccac cgcctggacg cgcgaacccc
     4381 gcatgccaac gcaggcgcca acggggtcga cagaagaatc gcgcgagatc accgcgatct
     4441 tggcgcgaga accgggatcg cgggcaaccg ccttgacctc gacaatgccg tcgtaaattt
     4501 ccggcacttc ctgtgcgaac agcttggcag tgaattgcgg gtgcgtgcgc gacaggaaga
     4561 tctggggacc gcgcggctcg cgacgcacgt cgtagatata ggcgcgaatg cgatcgccgt
     4621 tgcggaacgt ttctcgcggc aacaactcgt cgcggcgcac aatcgcctcg ccgcggccga
     4681 gatcgacgat gacgttgccg tattcgaccc gtttgacgat gccgttgacg atatcgaaaa
     4741 tgc
//
LOCUS       DATDHO010000010         2304 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_347040, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000010 DATDHO010000000
VERSION     DATDHO010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347040"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1322
                     /locus_tag="VIY07_00205"
     CDS             <1..1322
                     /locus_tag="VIY07_00205"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEY6380211.1"
                     /translation="LLESGPAAGALAAAQAGILSGHRDLLSFDMGGTTAKLCVIEDGQ
                     PLKTHDFEVDRIYRFRKGSGLPVRIPVIDMIEIGAGGGSIARVDSLGLLKVGPESSGA
                     DPGPVCYGQGGVEPTVTDADLVLGYLDPDYFLGGKMQLDINGARQALSRVAAPLGMTI
                     EQAAWGVHQIVNENMANAARAHLGERGKDPRRMPMYAFGGAGPVHGYRVAEILHLPAL
                     ISPFGAGVGSTFGLLAAPLAFDFVRSAYSRLDQQDWRLANKLLVEMAEEGRKILEGSG
                     LSAKEISYQRTADMRYVGQGHEVSVRLPDGVLAERHATEITAGFEETYRELYGRMGAD
                     VPFEIINWRVVASGPRPEMSFKLSSETSARRDPRKGSRRAYFPECGGFVSTAVYDRYA
                     LKPKMEFDGPAIVEERESTLIVGARGSARVDESLNVILEFSNENSSD"
     gene            1303..>2304
                     /locus_tag="VIY07_00210"
     CDS             1303..>2304
                     /locus_tag="VIY07_00210"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEY6380212.1"
                     /translation="MKTQAIDPVTLEVIWNRLLSVANEQQDALIRTAFSTIVRESQDL
                     ACGMFDTHGRMIAQSISGTPGHINAMATSMKHFLAAFPPDKLAPGDVLITNDPWMTAG
                     QINDITITTPFFKDGRLVALFANTCHSADIGGRILSAEAREVFEEGLRLPIMKLFDRG
                     EPNQVLMQIVRANVRQPDEVIGDFYAQTTSNDAGGRALLEMMEEFELESIDEVAEEII
                     HRSEQAVRTAVRELPDGEWTNETWSDGFEEPIVVRCTVRVAGDEIFIDFSGSSPQSTR
                     GINVVLNYTHAYASFAIKAAICPDVPHNEGSFRPVHVSAPPGSILNALEPAPVASRQV
                     "
BASE COUNT          479 a          615 c          729 g          481 t
ORIGIN      
        1 gtcttttgga atccggtcct gctgccggcg cccttgccgc tgcccaagcc ggcattctct
       61 ccggtcatcg tgatttgctc tcgtttgaca tgggcgggac cacggccaag ctctgcgtca
      121 tcgaggacgg ccaacccttg aagacccacg acttcgaagt ggatcgcatt tatcgtttca
      181 ggaagggcag tggcttgccg gtgcggatcc ccgtcattga tatgatcgag atcggtgccg
      241 gcggcggcag tatcgccagg gtggattctc ttgggttgct caaagtcggg ccggagagtt
      301 caggcgccga tcctgggccg gtctgttatg gtcaaggcgg cgtggagccc acagtcaccg
      361 acgccgatct agttctcggc tatctcgacc ccgattattt tttggggggc aaaatgcaac
      421 tggacataaa tggagcccgc caagcgcttt cgcgtgtggc cgcaccgctc ggaatgacaa
      481 tcgaacaggc agcatggggc gtgcatcaaa ttgtcaacga aaacatggcc aatgcggcgc
      541 gcgcccattt gggcgagcgg ggaaaagatc cacgccgcat gccgatgtat gcgttcggcg
      601 gtgcggggcc ggtgcacggc tatcgggtcg ccgagatttt gcatctgccg gcgctgatct
      661 cgccgtttgg tgccggggtc ggatcaacgt tcggcttatt ggctgcaccg ctagcgttcg
      721 actttgtgcg aagcgcctat agccgactgg atcagcaaga ttggcggctt gccaataagc
      781 ttctggttga aatggccgaa gagggacgca agatattgga aggatcgggc ctgtcggcaa
      841 aagaaataag ctatcaacga acagccgaca tgcgctatgt tggccaagga cacgaagttt
      901 ctgtgcggct ccccgatgga gttttggcgg aacgacacgc aaccgagatc actgcggggt
      961 ttgaagaaac ttaccgcgag ctgtacggtc gaatgggcgc ggatgtgcct tttgagatca
     1021 tcaattggcg ggtggtcgcc agcggaccac gacccgaaat gagtttcaag ttgtcaagcg
     1081 agacttccgc gcgaagggac cctcggaagg gctcgcgccg ggcttacttt ccggagtgcg
     1141 gcgggtttgt cagcaccgct gtttatgatc gttacgcttt gaaaccgaaa atggagtttg
     1201 acggaccggc aatcgtggag gaacgcgaat cgaccctgat cgtgggcgcc cgcggcagcg
     1261 cgcgcgttga cgaaagtctc aatgttatct tggagttcag taatgaaaac tcaagcgatt
     1321 gatccggtaa cgttagaggt catctggaac cggcttctgt ccgtggccaa cgagcagcag
     1381 gacgcgctga tccggacggc atttagcacc attgtgcgtg agagccagga tctcgcctgc
     1441 ggcatgtttg atacgcacgg acggatgatt gcgcaatcga ttagcggcac gcccggccat
     1501 atcaatgcca tggcgacttc catgaagcat tttttagccg cttttccacc ggataagctc
     1561 gcgcccggcg atgtgctcat caccaatgat ccgtggatga ccgctgggca gatcaatgac
     1621 atcacgatca ccactccgtt tttcaaagac ggccggctcg tggcactgtt cgccaatacc
     1681 tgtcacagcg cggacatcgg ggggcggatt ttgtcggcgg aagctcggga ggtcttcgag
     1741 gaagggttgc ggctgccgat catgaaactg ttcgatcgcg gcgagccgaa tcaagtactg
     1801 atgcagatcg tgcgcgccaa cgtgcgccag ccggatgaag tcatcggcga tttttacgcc
     1861 cagaccacaa gcaatgacgc cggcggccgg gcgctgcttg aaatgatgga ggagttcgag
     1921 cttgaaagca tcgatgaggt cgccgaagag attatccatc ggtccgagca agcggtgcga
     1981 acggcggttc gcgaactgcc cgacggcgaa tggacgaacg agacatggag cgacggattc
     2041 gaagaaccga tcgtggtgcg ctgcacggtg cgagtggctg gtgatgagat ttttatcgat
     2101 ttcagcggtt cctcgccgca gagcacgcgg ggaataaatg tcgttctcaa ctatacccat
     2161 gcttatgcga gcttcgccat caaagccgcc atctgccccg atgtgccgca caacgaggga
     2221 agcttcaggc cggttcatgt gagcgctccg ccgggtagta ttctaaatgc actggagccg
     2281 gcgccggtgg cgagccgcca ggtg
//
LOCUS       DATDHO010000011         2354 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_49923, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000011 DATDHO010000000
VERSION     DATDHO010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2354
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49923"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            150..377
                     /locus_tag="VIY07_00215"
     CDS             150..377
                     /locus_tag="VIY07_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380213.1"
                     /translation="MANGIRGERLQIMLAGEELTVLDDFRFRKRMPSRAAAIRELLKR
                     GLAAEGFETAAFGAKSEEYGVIGSDPLGRKK"
     gene            complement(416..1591)
                     /locus_tag="VIY07_00220"
     CDS             complement(416..1591)
                     /locus_tag="VIY07_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY6380214.1"
                     /translation="MFVTFFQELKKAGLPVTLREYLTLMEAMEADLASRRVDDFYFLS
                     RAALVKDERNLDKFDRVFGHVFKGLETLDDVVEVDIPAEWLKKLAEKYLTEEEKKQIE
                     AMGGLDKLLETLRKRLAEQKRRHQGGSKWIGTAGTSPYGAYGYNPEGVRIGQDANRNF
                     RAVKVWDRREFKDLDDEVELGTRNIKLALRRLRKFARTGAPEELDLDGTIKGTAHKGY
                     LDILMRPERHNAVKVLLFFDVGGSMDWHIKATEELFSAARSEFKHMEYFYFHNCLYER
                     VWKQNRRRFQETTPTWDVLHTYPHDYKVILVGDASMSPYEIAAPGGSVEHYNDEPGAI
                     WLERVTRTYPACVWLNPLAEREWGYTHSISMVHQLMGGRMYPLTLEGLDRAMRELVR"
     gene            complement(1689..>2354)
                     /locus_tag="VIY07_00225"
     CDS             complement(1689..>2354)
                     /locus_tag="VIY07_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380215.1"
                     /translation="KVQTLWDISFEVPRGEIVALVGANGAGKTTTLKVLSGLLKPQAG
                     RITLNGEHLEDCSPPDIVRRGIVHVPEGRGLFPDMTVFDNLLMGAYGTPAAGRRDRME
                     KVFAIFPRARERQQQLAGTLSGGEQQMVAIGRGLMADPKLLMLDEPSLGLAPLMVEEV
                     FRVIKEINGLGVTVLLVEQNTQHALALASRGYVLEAGRVVLSGSGQELLTNEDVRKAY
                     LGL"
BASE COUNT          478 a          727 c          661 g          488 t
ORIGIN      
        1 ccttgaactt ggctttttgc ccccaatgcc ccgaatgccc cgacaatctc cttggaacat
       61 ttgtctccaa aagcggttat aggggcactt tacaataatg agtaaattac tcatactgag
      121 taataaagga gtagtacagg aggggcatca tggcgaacgg cattcgtgga gaacggctgc
      181 agatcatgct ggcgggtgag gagctcactg ttttggatga tttccgcttc aggaagcgca
      241 tgccaagccg cgctgcagcg attcgggaac tcctgaaacg tggtcttgcg gccgagggat
      301 tcgagacggc agcttttgga gccaaatcag aggaatacgg ggtcatcggc tcggaccctc
      361 tcggccgcaa gaaatagacc gtgcggcctg ccgaaccgtc tctaatcgat tttcctcagc
      421 gcacgagttc gcgcatcgcg cggtcgagcc cctcaagggt gagaggatac attcgcccgc
      481 ccataagctg atgcaccatg gaaatcgagt gcgtatatcc ccactcccgt tcggctagtg
      541 ggttgagcca tacgcaggcc ggataggtac gagtcacgcg ctcgagccag atcgcgccgg
      601 gctcatcatt gtagtgttct accgagccgc cgggcgccgc tatttcatac ggcgacatgg
      661 atgcgtctcc gaccaagatg accttgtagt cgtgcgggta ggtgtgcagg acgtcccagg
      721 tcggagtcgt ctcctggaag cgccggcgat tctgtttcca gacccgctcg tagagacaat
      781 tgtgaaagta aaaatactcc atgtgcttga attcggaccg cgcggccgaa aacaattcct
      841 cggttgcctt gatgtgccag tccatcgagc cgcccacatc gaagaacaga agaaccttca
      901 cggcattgtg ccgctcggga cgcatcagga tgtcgaggta gcccttgtga gccgtccctt
      961 taatggtgcc gtcgagatcc agctcctcag gtgcgcccgt acgagcgaat ttccgcaggc
     1021 gacgcagtgc cagtttgata ttgcgcgtgc ccagctcaac ctcgtcatcg agatccttga
     1081 attcgcgcct gtcccatacc ttgacggcgc gaaaattgcg gttggcgtcc tgaccgatgc
     1141 gaacgccctc cgggttgtag ccataggctc cgtaaggcga ggtgccggcg gtcccgatcc
     1201 atttcgatcc gccctggtgg cggcgcttct gctcggccag ccgcttgcgg agcgtctcga
     1261 gcagcttgtc taggccgccc atcgcctcga tctgcttctt ctcctcctcc gtcagatatt
     1321 tttcggcgag ctttttcaac cattcggcgg gaatgtcgac ttcgacgacg tcatcgagcg
     1381 tttcaagtcc cttgaagacg tggccgaaca cgcgatcgaa tttgtcgaga ttgcgctcgt
     1441 ccttcaccag cgccgcgcgc gagagaaaat aaaaatcatc gaccctgcgc gaggcgagat
     1501 cggcctccat cgcctccatc agcgtcagat attcacgcaa cgtcaccggc aggccggctt
     1561 tcttgagctc ctgaaagaaa gtcacgaaca tcggccactt ttcctggcat atcgctcgcc
     1621 cgttaatttg gcgcgagcat tggcccttcg caagcgaccg cggctttctt cgacgaaaca
     1681 aaaaccggtc agagacccag gtaggccttg cgcacatctt cattcgtgag caattcctga
     1741 ccgctcccgg acaacaccac gcggccggct tccaggacgt agccccgact ggcgagagcg
     1801 agcgcatgct gagtgttttg ctcgaccagc aacaccgtga cgcccaggcc gttgatctcc
     1861 ttgatcaccc ggaacacctc ctcgaccatc agcggggcga ggccgaggga aggctcgtcc
     1921 aacatcaaca atttcggatc ggccatcagg ccgcgcccga tcgcgaccat ctgctgctcg
     1981 ccgccggaga gcgtgccggc cagttgctgc tggcgttccc tcgcgcgcgg gaatatcgca
     2041 aaaacttttt ccatccggtc gcggcggccc gcggccggtg tgccgtaggc gcccatcaac
     2101 aaattatcga acaccgtcat gtccggaaac agaccgcgtc cttccgggac atgaacgatc
     2161 ccgcggcgga cgatgtccgg cggcgagcaa tcctcaaggt gttctccatt cagcgtgatc
     2221 ctgcctgcct gcggcttgag caaaccggac aagaccttca gcgtggtggt cttgccggca
     2281 ccattggcgc cgaccagggc aacgatctcc cccctcggca cctcgaaaga gatatcccag
     2341 agggtctgga cctt
//
LOCUS       DATDHO010000012         1507 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_49927, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000012 DATDHO010000000
VERSION     DATDHO010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1507)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1507)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1507
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49927"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..373
                     /locus_tag="VIY07_00230"
     CDS             <1..373
                     /locus_tag="VIY07_00230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380216.1"
                     /translation="FLNMNRTVCRRALRRGAFRGAFAVTARFNETPDASGLTGFLETI
                     IQDPAVAGGEIWIALDPAGMPVSMEEKLRGGDKKIKGCLMVDTLRQSDAEAMGARLST
                     QFSEAEVGVFRVLCQLGRADL"
     gene            complement(422..1477)
                     /locus_tag="VIY07_00235"
     CDS             complement(422..1477)
                     /locus_tag="VIY07_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEY6380217.1"
                     /translation="MLVGDCIAGMAKLPAASVDIVFADPPYNLQLASDLKRPDDSRVD
                     AVDDDWDKFASFSAYDEFTRLWLTACRRVMKPAATIWVIGSYHNIFRVGAIMQDLGFW
                     ILNDVIWRKSNPMPNFRGRRFTNAHETLIWASRDADARGYTFNYEALKAGNEDIQARS
                     DWTLPLCTGEERLKNRSGKKLHPTQKPEALLARVILSSSRPDDLVLDPFCGTGTTGAV
                     AKRLGRRFVGCEQDAKYADAASRRISATKPLEAPTLAPFATAREAPRVPFSALIERGL
                     VSPGTRLVDAKKRHKALVRADGAVSLDGTVGSIHRIGALAQGLEACNGWTFWHLETPK
                     GLTVIDELRAKVRAEMS"
BASE COUNT          290 a          467 c          466 g          284 t
ORIGIN      
        1 atttctcaac atgaaccgta cggtgtgccg ccgcgcgctc cgacgcggcg ccttccgcgg
       61 ggcttttgcg gtaaccgccc ggttcaatga aacgccggac gcatccgggc tcacgggatt
      121 tctcgaaacc atcatccaag atccggccgt tgccggcggc gaaatctgga ttgcgctcga
      181 ccctgccgga atgcccgtct cgatggagga aaaattgcgc ggcggggaca aaaagatcaa
      241 aggctgcctg atggtcgata cgctgcgcca gagcgatgcc gaggcaatgg gggcgcgctt
      301 gtcgacacaa ttttccgagg ccgaggtcgg cgtattccgc gtcctctgcc aattgggccg
      361 cgccgacttg tagattggtc cacggcactt gccgccaaga ggaagttctc ggtgcgatga
      421 gttaggacat ctccgcgcgt accttggcgc gcaactcgtc gatgacggta agacccttcg
      481 gcgtttccag atgccagaag gtccagccat tgcaggcttc gagtccctga gccagcgcgc
      541 cgatgcggtg aatggagccg acagtgccgt cgagtgatac cgcgccgtcg gcgcgcacca
      601 gcgccttgtg gcgcttcttc gcatcgacca gccgcgttcc cggcgaaacc aggccacgct
      661 cgatcagcgc cgagaaaggc acacgcggag cttcgcgcgc ggttgcgaaa ggcgcgagcg
      721 tgggcgcttc caggggcttt gttgcagaga tgcgtctgct cgccgcatcg gcatatttcg
      781 catcctgctc gcagccgaca aagcgacggc cgagtctttt ggcaacggcg cccgtcgtac
      841 cggtgccgca gaatggatcc agcaccagat cgtcggggcg cgaactcgac aggatgacgc
      901 gcgccagcag cgcttccggc ttttgggtcg ggtgtagttt cttaccgctg cgattcttca
      961 gacgctcctc gccggtgcac aggggcagag tccagtcaga gcgcgcctgg atatcttcat
     1021 tgccggcctt gagcgcctcg taattgaacg tgtatccgcg cgcgtcggcg tcgcgcgacg
     1081 cccatatcag ggtctcatgc gcattggtga aacgccgtcc gcggaaattc ggcatcgggt
     1141 tcgattttcg ccagatcaca tcgttcagga tccagaaccc gagatcctgc ataatcgcgc
     1201 caacacgaaa aatgttgtga taggaaccga tgacccagat ggtcgctgca ggcttcatca
     1261 cgcggcggca tgcggtaagc cacaaccgcg tgaattcgtc atacgccgag aagctcgcga
     1321 acttgtccca gtcatcgtca acggcatcga cgcgagagtc gtccggccgc ttcagatcgc
     1381 tcgcgagctg caagttgtaa ggcggatcgg cgaacacgat atcgaccgaa gccgccggca
     1441 acttcgccat cccggcgatg cagtcgccga caaggatgcg atgcggttgc ggactctctg
     1501 aaactcc
//
LOCUS       DATDHO010000013         2289 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_396611, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000013 DATDHO010000000
VERSION     DATDHO010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396611"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2277)
                     /locus_tag="VIY07_00240"
     CDS             complement(<1..2277)
                     /locus_tag="VIY07_00240"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY6380218.1"
                     /translation="MLRAGRPVGAIAIARPQTGYFPERQTELVRTFADQAVIAIENAR
                     LLGELRERTDDLTESLEQQTATSEVLKVIASSSGELQQVFDTMLANATRLCGASYGAM
                     FLRDGDGFRNTALFGPLPPEYIEQISGILVRPGPAGALTQVVQKRQPVHIPDLRESRA
                     YLDGDILPVAAVEVAGVRTIVCVPMFKSDEVIGAITIYRKEIRPFTDKQIELVSNFAA
                     QAVIAIENTRLLNELRQRTDDLSESLEQQTATSEVLQVISKSPGELEPVFQAMLENAV
                     RICGASIGILFRYADGAYTATSLLGVAPAYAEYLNRGPIRPGPTTGLGRLTREKKTIQ
                     VADTKSEEAYTEREPLRVATADLGGARSLLNVPMIKDGELIGAIGIYRQEVRPFTDKQ
                     IELVSNFAAQAVIAIENTRLLNELRERTDDLSESLQQQTATADVLKVISRSTFDLQTV
                     LDTLIESATRLCEADHAWLFERKGEFFSWVAGYGNATDIHARIKDYFLSHPVPVDRGS
                     VTGRAAREAKVIHVTDVLSDKDYTWSEAQKIGGYRAALGVPLSRKGDVVGVIFVARTA
                     PQPYTAKQIELVTTFADQAVIAIENTRLLNELRESLEQQTATADVLKVISRSAFDLQP
                     VLNTLTESAAKLCEADMAGIVRPKDGEHYWVTSLNFPPAFMDYVKTRPILRDRGSVAG
                     RALLEGRVVHIADVLADPDFTFGEAQKRGGYRTVLGVPLLREGNPIGVIVLTRLAVRP
                     FTEKQIDVLRTFADQAVIA"
BASE COUNT          451 a          684 c          685 g          469 t
ORIGIN      
        1 ggcgatcacc gcctggtcgg cgaaagtcct caacacgtcg atttgcttct cggtaaaggg
       61 acgaacagcg agccgggtca gcacaataac gccgattgga ttgccctccc gcaacagcgg
      121 aacgcccaga accgtgcgat aaccaccccg tttctgcgct tcaccaaagg tgaagtccgg
      181 atcggcaaga acgtcggcaa tgtgaacgac gcgtccttca agcaaggcgc ggcctgcgac
      241 cgaaccgcga tcgcgcagta tcgggcgggt cttgacgtag tccatgaatg ccggggggaa
      301 gttcaggctc gtgacccagt agtgctcgcc atccttgggg cgcacaatgc cggccatatc
      361 ggcttcgcag agttttgccg cagattcggt gagtgtgttg aggaccggct ggagatcaaa
      421 ggcggaccgg ctgataactt tcagcacgtc cgcggtcgct gtctgttgct ccagcgattc
      481 gcgcaactca ttgagaagtc gggtgttttc gatggcaatg acggcctggt cggcgaaggt
      541 cgtcaccaac tcgatctgtt tcgccgtata tggctgcggc gcagtccgtg cgacgaagat
      601 gacacccacg acatcacctt tgcgcgaaag aggaacgccc agagcggcac ggtagcctcc
      661 gatcttctgg gcctcactcc aagtgtagtc cttgtcagag agcacatcag tgacgtggat
      721 cacttttgcc tcgcgcgcag cgcgacccgt gacgctgcca cgatccaccg gaaccgggtg
      781 gctcaggaaa tagtccttga tacgcgcatg gatgtcggtt gcgttgccat aacccgcgac
      841 ccaactgaaa aactcgccct tccgttcgaa cagccaggca tgatcggcct cgcagagccg
      901 cgttgccgat tcgatcaggg tatcgagcac cgtctgcaga tcaaacgtcg accggctgat
      961 gaccttgagc acatcggcgg tggcggtctg ctgctggagg gactccgaaa gatcgtcggt
     1021 gcgctcgcgg agttcattga gcagccgcgt gttctcgatg gcaatcacgg cctgcgcggc
     1081 aaaattgctg accagctcaa tctgcttgtc ggtgaacggc cgcacttcct gacgatagat
     1141 gccgatggct ccgatcagtt ctccgtcctt gatcatcggc acgttcaaca agctgcgtgc
     1201 gccgccaagg tcggcggttg caacgcgaag cggttcgcgt tcggtgtagg cctcttcgct
     1261 tttggtgtcg gcaacctgga tcgttttttt ctctctggtg aggcggccga ggccggtggt
     1321 gggcccaggc cgtatcggtc cgcgattgag gtattccgcg tatgccggcg ctacgccgag
     1381 caaggatgtg gcggtgtagg cgccgtccgc gtacctgaac agaattccga tgctggcccc
     1441 gcaaatccgc actgcgttct ccagcatcgc ctgaaacacc ggctccaatt cgccgggcga
     1501 cttcgaaata acctgcaaga cttccgatgt cgcggtctgc tgctcgagcg attccgaaag
     1561 atcatccgtg cgttggcgca gttcattaag cagccgcgtg ttctcgatgg cgatcacggc
     1621 ctgcgcggca aaattgctga ccagctcaat ctgcttgtcg gtgaacggcc ggatttcctt
     1681 gcgatagatc gtaatggccc cgatcacctc atctgacttg aacatcggga cacacactat
     1741 agtgcggacg ccggcgactt cgacggcggc gacaggcaat atgtcgccat cgagataggc
     1801 gcggctttcc cgcaggtcgg gtatgtgcac cggttggcgc ttctgcacga cctgcgtcaa
     1861 cgccccggcc gggccgggac ggaccaggat gccgcttatt tgctcgatat attcgggggg
     1921 cagcggacca aagagagccg tgttccggaa accatcgccg tctcgaagaa acatcgcacc
     1981 gtaactcgct ccgcacaacc gcgttgcatt ggcgagcatg gtgtcgaata cctgctgcag
     2041 ctcgccagac gagcttgcaa taaccttcag cacttccgat gtcgcggtct gctgctccag
     2101 tgattcggtc agatcgtctg tgcgttcgcg cagttctccg agcaaccggg cgttctcaat
     2161 cgcgatcact gcctgatcgg caaaggtacg gacaagttcg gtctgacgct cgggaaagta
     2221 tccagtttga ggtcgtgcaa tagcaatcgc cccaaccgga cgaccggcac gcagcattgg
     2281 gacagccat
//
LOCUS       DATDHO010000014         7095 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_198560, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000014 DATDHO010000000
VERSION     DATDHO010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7095)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7095)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7095
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198560"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            161..1780
                     /locus_tag="VIY07_00245"
     CDS             161..1780
                     /locus_tag="VIY07_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEY6380219.1"
                     /translation="MNRPIASPDSMSTTPLAAEVDRRRTFAIISHPDAGKTTLTEKLL
                     LFGGAINLAGQVKAKRDRRSTRSDWMAIERERGISVVTSVMTFDYDGRVFNLLDTPGH
                     EDFSEDTYRTLTAVDSAVMVIDAAKGIEARTRKLFEVCRLRDIPIVTFINKMDRESRD
                     PFELLDEIEKTLALDTSPLTWPIGRGRDFAGTCDLATGEMRLVSEDGKTVERQPLDLP
                     ALAARNPMLDAATISDELRLVKGACRPFDFKSFREGYLTPVFFGSALKNFGVKDLLDA
                     LAAFAPAPRAQASSTRIVDAHEHAMTAFVFKIQANMDPNHRDRIAFARLCSGKLRRGM
                     KAKLTRTAKPLTLSTPQFFFAQDRALADEAYAGDVVGIPNHGTLRIGDTLTEGEDLAF
                     LGVPNFAPEILRRVKLGDPMKAKKLKEALQQMAEEGVVQVFRPLDGAPALVGVVGSLQ
                     LDVLKVRLSEEYGLDISFEQPEFQLARWISADDRKKLEDFVQANYSSCAEDLDNDKVF
                     MARNQFILDYTRERAPGISFADIKDVKDKAV"
     gene            complement(1777..2766)
                     /locus_tag="VIY07_00250"
     CDS             complement(1777..2766)
                     /locus_tag="VIY07_00250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6380220.1"
                     /translation="MTEAAMHRLAKRLIAALFLSLGLSAAVAAHDWPTKTVRVVVPFG
                     PGSTPDIVARLVVEGLQQKYPGSAFLVENKPGASGNLGTDIVAKAAPDGSTLGVSIGG
                     PLAINTLLFSRLPYDPRKDIAPVTQLVTQPSVLAVTPELGISSVTELVALLKKKPGKY
                     NFASIGNGSLSHLAMEAIAMKAGTQLVHVPYASSPQAITAVIRNDAQMACLPAISVTP
                     QAAAGTVKILAVSTSRRSPYLPDVPTLREVGIDVEADAWNGLIAPGNTPKPIIDTISK
                     DVAEIIRRPEVREKLAAQLMEPVGSSPEELRVRMDGEIARWAPVIQAANVKLN"
     gene            2848..3429
                     /locus_tag="VIY07_00255"
     CDS             2848..3429
                     /locus_tag="VIY07_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HEY6380221.1"
                     /translation="MGLGILVLGLGVFLATHVFVSFRDARANVIARIGLPAYRGVFAL
                     ISLAGLVLIIWGFGEYRAHGLVRVWSPPAFMRHITLGLMLFATIFLVAAFIPSHLKAR
                     LKHPMLASVKTWAFAHLLSNGDLGSILLFGTFLAWGVYARIAAKHRNDLKPVPEPSGW
                     TNDALVVAIGVIVYLALGYAFHPVVLGVPVFGK"
     gene            3431..4258
                     /gene="panB"
                     /locus_tag="VIY07_00260"
     CDS             3431..4258
                     /gene="panB"
                     /locus_tag="VIY07_00260"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEY6380222.1"
                     /translation="MSVQDQIRRLTAPDIRARKGGEPIVCLTSYHAHTARIVDAHCDV
                     ILVGDSLGMVMHGLETTVPVTLEMMILQGHAVMRGSKRALVVVDMPFGSYETSKEQAF
                     TNAARVMKETGCGAIKVEGGKRMAETIAFLAERGVPVMGHVGLTPQAINTIGSFRAQG
                     RDETDWARIEEDAISVSQAGAFSVVIEAVAEPLARKLTSAVPIPTIGIGASPACDGQI
                     LVLEDMLGLSPRVPKFVKRYGTLGPGIEKAVADYATEVRSRAFPGPEHVYSMKSKKT"
     gene            4371..5024
                     /locus_tag="VIY07_00265"
     CDS             4371..5024
                     /locus_tag="VIY07_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6380223.1"
                     /translation="MADIFHEVDEEVRRERLKKLWERYGVYAIAIAVLVVAGIAAWRG
                     YEYWVAKRAAAAGAAFEAALTLSEQGKFAEAEAALAKIAAEAPAGYRLLARLRAAAAL
                     GQIRPADAVKAYDELSADASLGAMWQDLAAVRAGMLLVDTASLADMRRRLDPVAEPAR
                     SLRHTARELLALSAWRNHDLAAARRYLDMITGDAESPVGTRARAEVLSGLVAAEGKG"
     gene            5036..5530
                     /locus_tag="VIY07_00270"
     CDS             5036..5530
                     /locus_tag="VIY07_00270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380224.1"
                     /translation="MRAIHRAVLLTGLAVAAPTLTACSNFDLDKLDVFGLNEKKKLPG
                     ERKDLFPGGVPGVTQGIPPEYMRGNQPTPNTAQSLAAEQNKEAAAAEQESKPEPEQKP
                     KRAAKPRTASSPPPEASAQPSPWPQQNQQPAQQSTQAPWPAPAQTNTPSPWPSSPQPG
                     TFSR"
     gene            5629..6990
                     /gene="der"
                     /locus_tag="VIY07_00275"
     CDS             5629..6990
                     /gene="der"
                     /locus_tag="VIY07_00275"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEY6380225.1"
                     /translation="MNCTIAIVGRPNVGKSTLFNRLVGRRLALVDDRPGVTRDRREGQ
                     GRLGDIEFTVVDTAGLEQSAPESLSGRMRQQTEAAIDQADVIFFMIDARTGPVPVDHA
                     FADAARKSGKPVILIANKSEGTAGDSGRLEAYALGLGEPVPVSAEHDEGMSDLYDALR
                     AVLPDEVPPPETETETDAAHPIRVAIIGRPNAGKSTLINRLIGEERLLTGPEAGITRD
                     AIAVEHDWQGRKFRIYDTAGLRRRSRVEEKLEKLSVADALNAVRFAEVVVVLLDVENA
                     FEEQDQRIADLVEQEGRAVVIAVNKWDLKEKTAGAIGKLREQAEEKLTQLKGVPLVAV
                     SGLTGEGLDRLMQAVIDAYDVWNRRIPTSALNRWFEHAVSAHPPPAVSGRSLRLNYIT
                     QPKSRPPSFVLFCTRAEAVPDAYKRYLLNSLRETFDLPGTPIRLALREKDNPYKGRAK
                     RKH"
BASE COUNT         1382 a         2105 c         2191 g         1417 t
ORIGIN      
        1 gacgtgggcg gcggcaggct gatggttggc tttgatcctg aagcctataa ggccaagttg
       61 agcgctcgat agtcagcgca cggtgagtct cccgggatat tgccgggcga tgcagcggcg
      121 acggcttgat tttgccggta tttgcggcca catgcggcgc atgaataggc ccattgcctc
      181 gcccgattcg atgtccacga cgccgctcgc cgccgaagtc gaccggcggc gcaccttcgc
      241 aatcatttcc caccctgacg cgggcaagac gacgctcacc gagaaattgc tgttgttcgg
      301 cggggccatc aatctggccg gccaggtcaa ggccaagcga gaccgccgct cgacccgttc
      361 cgactggatg gcaattgagc gcgagcgagg catttccgtt gtgacgtcgg tgatgacgtt
      421 cgactacgat ggccgcgtct tcaatctgct cgacacgccg ggccacgagg acttctcgga
      481 agacacttat cgtacgttga ccgcggttga ttctgccgtg atggtcatag acgccgcgaa
      541 gggcatcgag gcgcgcacgc gcaagctttt cgaagtatgc cggctgcgcg acataccaat
      601 cgttacgttc atcaacaaaa tggaccgcga aagcagggat ccgttcgagt tgctcgacga
      661 gatcgaaaaa acgctcgctc tcgacacgtc cccgctgacc tggccgattg gccgaggccg
      721 cgactttgcc ggaacctgcg atcttgccac cggcgagatg cggcttgtca gcgaggacgg
      781 caaaacggtt gagcggcaac cgctcgacct gcccgcgctt gcggcaagaa atcccatgct
      841 cgacgctgcg acaatctcgg acgagctcag gctggtgaaa ggagcttgcc ggcctttcga
      901 tttcaaatcg ttccgtgaag ggtatctgac gcccgtgttc ttcggctcgg ccctgaagaa
      961 tttcggcgtc aaggatctgc tcgatgcgtt ggccgctttc gcgccggcgc cgcgcgcgca
     1021 ggcgtccagc acgcgcatcg tcgacgcgca tgaacatgcc atgacggcct tcgtcttcaa
     1081 gatacaggcc aatatggatc caaatcaccg tgaccgaatt gccttcgcgc gcctttgctc
     1141 aggcaagttg cgccgcggca tgaaagcgaa gctcacgcgc accgccaagc cgctgacctt
     1201 gtccacccct cagttctttt ttgcccagga ccgcgcgctc gccgatgaag cctatgccgg
     1261 cgacgttgtt ggcattccca accacggcac ccttcgcatc ggggacacgc ttaccgaggg
     1321 ggaggatctc gcgtttctcg gtgtgccaaa cttcgcgccg gaaatcctgc gcagggtaaa
     1381 gctcggcgat ccgatgaaag cgaaaaaact gaaagaggcg ctccagcaga tggcagagga
     1441 gggggtcgtc caggtattcc gtccgctcga cggcgcaccg gccctggttg gcgtagttgg
     1501 ctccttgcag cttgacgtcc tgaaggtgcg cttgtcggag gaatatggcc ttgacatcag
     1561 tttcgagcag ccggaattcc agctggcacg gtggatcagc gcagatgata gaaaaaaact
     1621 cgaggatttc gtgcaggcca attattcaag ctgcgccgag gatctcgaca acgacaaggt
     1681 gttcatggcc cgcaaccaat ttattctcga ttacacccgc gaacgcgcgc caggaatctc
     1741 attcgctgac atcaaagatg tgaaagacaa ggcagtctag ttcaatttca cgttcgcggc
     1801 ttgtatcact ggcgcccagc gcgcaatctc gccgtccatc cgcacgcgca attcttcggg
     1861 agaggagccg accggctcca tcaattgcgc cgctagcttc tcgcgcacct ccggtcgtct
     1921 gatgatctcg gctacgtctt tgctgattgt atcgataatc ggcttgggag tgttgccggg
     1981 tgcgatcaag ccgttccagg catctgcttc aacgtctatg ccaacctccc tcaacgtcgg
     2041 cacatccggc aaatagggtg agcgcctgga agtggagacg gcaagaattt tcaccgtgcc
     2101 tgccgcagcc tgaggcgtta ccgatatggc cggcaggcag gccatttgcg catcgttgcg
     2161 gatcacggcc gtgatagctt gcggcgaact ggcgtaaggc acatgcacaa gctgcgtgcc
     2221 agccttcata gcgatggcct ccatggcaag atgcgacagc gagccatttc ctatcgaagc
     2281 gaagttgtat ttgccgggtt tcttttttag cagggcaacg agctccgtga cggagctgat
     2341 cccaagctcc ggagtcaccg cgagcacgct cggctgcgtg accaactggg taacaggcgc
     2401 aatgtccttg cgcggatcgt acggcagccg cgagaacagc aaggtgttga ttgccagcgg
     2461 acccccgatg ctcacgccga gcgtcgatcc atccggcgcg gccttcgcca cgatatcggt
     2521 gccgagattg ccgcttgccc caggcttgtt ctcgacgaga aatgcgctcc ccgggtattt
     2581 ctgctgcagg ccctcgacga ccaggcgcgc cacgatatcc ggcgtcgatc cgggtccaaa
     2641 tggcactaca acccgtacgg tttttgtggg ccaatcgtgg gccgcgactg ctgcgctgag
     2701 gccaagggac aggaagagcg ctgcgatcag acgctttgcc aaccgatgca ttgcggcttc
     2761 ggtcatcaaa gatgtccccc gcgggaagtg gcttgcattg gttgcagcta tcctctactt
     2821 gcggcggcaa caaagtgtga gtgtatcatg ggcttaggca ttctcgttct tggcctgggc
     2881 gtcttcctgg cgacgcacgt attcgtatcg tttcgcgacg cgcgcgcgaa cgtgatcgca
     2941 cggatcgggc tgccggctta tcggggcgta ttcgctctta tctcgctcgc gggcctcgtg
     3001 ctgatcatat ggggctttgg ggaataccgg gcgcacggat tggttcgggt ttggtcgccg
     3061 ccggcgttca tgcggcacat caccctaggg ctgatgctgt tcgcgacaat ctttctcgtc
     3121 gctgctttta tccctagcca tctcaaggca cgcctcaagc atccgatgct ggcgagcgtg
     3181 aagacctggg ctttcgcgca cctgctctcc aatggcgacc ttggctcgat tctgctgttc
     3241 ggcaccttcc tcgcttgggg cgtgtacgca cggattgctg ccaaacaccg caatgatctt
     3301 aagccggttc ccgagccgtc cggttggacg aacgatgcgc ttgttgttgc aatcggcgtg
     3361 atcgtttatc tcgcgctggg ttatgccttc cacccggttg tgctgggtgt gcccgtgttc
     3421 ggaaaataac atgtcggtcc aggaccaaat ccggcggctt accgccccag acatacgggc
     3481 gcgcaagggc ggtgagccga tcgtgtgtct tacctcttat catgcccaca ctgctcgcat
     3541 cgtcgacgcc cattgcgatg tgatcctggt cggcgactcg ctcggcatgg tcatgcatgg
     3601 gctcgaaaca acggttccgg tcacgctcga aatgatgatt ctgcaaggtc atgccgtgat
     3661 gcgcggttcg aaacgcgcgc tggtggtcgt cgacatgcct ttcggttcct acgaaacctc
     3721 gaaggagcag gcttttacga atgccgcgcg cgttatgaag gagaccggct gcggtgcgat
     3781 caaggtcgag ggcggcaaac ggatggcgga gaccattgcc tttcttgccg aacgcggcgt
     3841 gccggtgatg ggacatgtcg ggctgactcc gcaggcgatc aatacgatcg ggtcattccg
     3901 cgctcagggc cgcgacgaaa ccgactgggc acgcattgag gaagatgcga tttcggtttc
     3961 gcaggcaggc gcattttcgg tcgtgattga agcggtggcc gagccgcttg cgcgcaagct
     4021 gacatcagcg gtgccaattc ccaccatcgg cataggagcg agtcccgcct gcgatggcca
     4081 gattctggtg cttgaggaca tgctcgggtt gtcgccgcgg gtgccgaaat tcgtcaaacg
     4141 ctatggaacc cttggtcccg gaattgagaa agcggtcgcg gattacgcga cagaagtgcg
     4201 ttcgcgcgcc tttcccggcc cggaacacgt ttattcgatg aaaagcaaga agacctaagg
     4261 ccctgaaaca ttaacggttg tgggcttcgg ctttgcctta gacgcgccac atcgctagtt
     4321 tacggcgcaa tccggcccgg gcggggtcta aaggcaggtt tgggacgatc ttggccgata
     4381 tttttcatga agtagacgaa gaagtcaggc gcgaacggct caagaagctg tgggagcgct
     4441 acggcgtcta tgcgattgcg attgccgtcc tggttgtggc cggcattgcc gcctggcgtg
     4501 gctatgaata ctgggtcgcc aaaagagccg ccgccgcggg cgccgctttc gaagccgcgc
     4561 tgacgttgag cgagcagggc aaattcgccg aggcagaagc tgcgctggca aagatcgcgg
     4621 ccgaagcccc cgcggggtat cgcttgctgg cgcgcctacg ggcagcggcg gcgctcggcc
     4681 aaattaggcc cgccgacgcg gtaaaagcat acgatgaact ttcggctgat gcctcgcttg
     4741 gcgcgatgtg gcaggatctc gctgccgtgc gcgccgggat gctgctggtc gacaccgctt
     4801 cgcttgctga catgcgcagg cggctcgatc cggttgccga gcccgcgcgc agtcttcgtc
     4861 acaccgcgcg ggagcttctg gcgttgtccg cttggcgcaa tcacgatttg gctgctgccc
     4921 ggcgatatct tgatatgatc accggcgatg cggaatcacc tgtgggcacg cgcgcgcgtg
     4981 cggaggttct ctccgggctg gtcgccgcgg aaggcaaagg ttgaggggta aaggcatgcg
     5041 agcaattcac cgcgccgtgc tgcttactgg cctcgccgtc gctgcgccga cactgacagc
     5101 gtgttcgaac ttcgatctcg acaagctcga tgtgtttggc ctgaacgaga agaaaaaact
     5161 gcctggcgag cgcaaggatc tttttcctgg cggcgttccc ggcgtcacac aaggcatccc
     5221 tccggaatac atgagaggga atcagccgac gcccaatacc gctcaatcac tcgcggcgga
     5281 gcaaaacaag gaagcggcgg cggccgagca ggagagcaag ccggaaccgg agcagaagcc
     5341 gaagcgcgcg gcaaaaccgc gaacggcatc ctcgccgccc ccggaagcca gcgcgcagcc
     5401 ctcaccgtgg ccgcagcaga atcaacaacc tgcacagcaa agcacgcagg cgccctggcc
     5461 ggcgccagca caaaccaata ctccgtcgcc ctggccttcc tctccgcagc ccggcacttt
     5521 ctcgcgctga cgagtccgcc tttgcgggct tgaccggaag gtgagcgccg ccgcaaacag
     5581 tcttgaattt agtgatggac tgtcggctcg tgcctggcag cgacaccgat gaattgcaca
     5641 attgccattg tgggtcggcc aaacgtcgga aaatcgactt tgttcaatcg gctggtcggt
     5701 cggcgtcttg cgttggtcga cgaccggcca ggcgtcacgc gcgaccggcg cgaggggcag
     5761 ggccgtctgg gtgatattga gtttacggtg gttgacacgg cgggcctgga gcagtctgcg
     5821 cccgaaagtc tatccggtcg gatgcggcag cagaccgaag ccgccatcga tcaagccgac
     5881 gttatttttt tcatgattga cgcgcggacc gggccagtgc cggtcgatca cgcctttgcc
     5941 gatgcggcgc gtaaatccgg caagccggtc atactcatcg ccaacaagag cgagggaaca
     6001 gcgggcgact ccggtcggct ggaagcctat gcgctcggac tcggcgagcc agtaccggtt
     6061 tctgccgagc acgatgaggg catgtccgat ctttatgatg ccctgcgtgc cgtgctgccg
     6121 gacgaagtcc cgccgccgga gaccgaaacc gaaacggatg cggctcaccc aatccgtgtc
     6181 gctattatag gccgccccaa cgcgggcaag tcgacgctca tcaaccgatt gatcggcgag
     6241 gagcgcttgc tcactggacc cgaagccggc attacgcgcg acgccattgc ggtcgagcat
     6301 gactggcagg gacgcaaatt tcggatttat gacaccgccg gactacgccg acggtcgcgc
     6361 gtcgaggaaa aattggagaa gctttcagtt gccgacgcgc ttaatgcagt gcgctttgcc
     6421 gaagttgtgg tggtgctgct cgatgtcgaa aatgccttcg aggaacagga tcagcgcatc
     6481 gccgaccttg tcgagcagga aggccgtgcc gtcgtcattg ctgtcaataa atgggatttg
     6541 aaggaaaaga cggccggcgc aatcggcaaa ttgcgcgaac aggcggagga gaagctcacc
     6601 caactcaaag gtgtgccgtt agtggccgtc tccggcctta cgggcgaggg tctcgaccgt
     6661 ttgatgcagg ctgtcattga cgcctatgac gtgtggaaca ggcgtattcc caccagcgca
     6721 ttgaaccgct ggttcgagca tgcggtcagc gctcatcctc cgccggccgt gtccggacgc
     6781 tcgttgcgtc tgaactacat cacacagccg aaaagccggc cgccaagctt tgtcttgttc
     6841 tgcacccgtg cagaagctgt gcccgatgcc tacaagcggt acctgttgaa ctcactgcgc
     6901 gagacgtttg acctgcccgg gacgccgatc cgcctggccc tgcgcgagaa agataatccg
     6961 tacaagggca gggcaaagcg caagcactga cacgcttgga atcaagccgg gctcggcaaa
     7021 tccagaaatt tttccgcgcg gaaatcatag atcctgccat tttccgagca ctcgggaaga
     7081 cataacggga ggatt
//
LOCUS       DATDHO010000015         2960 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_396651, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000015 DATDHO010000000
VERSION     DATDHO010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2960
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396651"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2920)
                     /locus_tag="VIY07_00280"
     CDS             complement(<1..2920)
                     /locus_tag="VIY07_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6380226.1"
                     /translation="MFSSIFVDRPRLAVVIALVTAIAGLVSLLAIPIAQLPDIVPPQV
                     SVSASYPGASSEVVDTTVAQVIESQVIGVDKMIYMKSISGNDGSYSLLVSFELGTNPD
                     INTVNVNNRVQVALAKMPDEVRRSGVRVQKKSSALLAVIALSSPKKTRDELFLSNYVT
                     INLLDQIKSTPGVGDATLFGPQDYAMRVWIKTDQLTGLGITTSDIIAALQSQNVQAAV
                     GRIGARPISDDQQLQLNIQTKGRLSSVQEFENIIIRTNPDGSVLRLGSIARLQLGAAN
                     LDRATRLNGSPSSLIGIYQSPGANALTTIEALKKLMNDNAKNFPEDVAWKITYDPTTF
                     VTATIETVKHTLVEAAILVLLVVFIFLGNVRATLIPMVAVPVSLIGTFIVLNAIGYSA
                     NTVSLLAMILAIGIVVDDAIVVVEAVEQTMEQHPELSPAEATKRAMQGIFAPIIAITL
                     VLLAVFVPVGFISGISGELFRQFAVTVAVAMFLSAVNALTLSPALCAVLLKPQHGPRR
                     GVIGVMMRSIDWVRDQYGIVVARLVRISIIGIIAVGAAFGGVGLLSRVTPTGFLPSDD
                     QGAFFVVVQLPDGASIGRTSDVVHQVETILQKESAIADVSSIIGLNFIDNFSQANAGF
                     LIATLKGFDERKGPEQSADAIIGRLAGQLRQLRGATAVPLQPPPIIGLGTGGGFSFVI
                     QDVQGGPPQNLAQVTRGLVIAANQNPQLSRVFSTYSAANPSIFLDIDRDKARILGVEI
                     SSIFQALQTSLGGFYVNDMNLFGRTWQVQVQAEAEDRASVDDIYRINVRSAEGKMVPL
                     RSLVEVRVVLGPQGLVRYNNTRAATVQGGPAPGISSGQALVAMDDVAAKTLPSGYRGA
                     WTDISFQEKRAEGQTTIILAFALLFAYLFLVGLYESWTIPVPVLLSVSVGVAGAYLAI
                     VSAGLVLDLYAQIGMVVLIGLAAKNGILIVEFAKERREHGVPLHEAATEGARLRFRPV
                     M"
BASE COUNT          652 a          892 c          861 g          555 t
ORIGIN      
        1 tcatcacggg cctgaagcga agccgggctc cctccgttgc ggcttcgtgc agcggcacgc
       61 cgtgttcacg ccgttccttg gcgaattcca cgatcaatat gccgttcttt gccgccaggc
      121 cgatcaggac aaccatgcca atctgggcat agagatcgag gacaaggccg gcggagacaa
      181 tcgccagata agcacctgcc acgccgacgg agaccgacaa cagcaccggg acaggaatgg
      241 tccagctctc gtagaggccg accaggaaca ggtaagcgaa caaaagggca aacgccagaa
      301 tgattgtggt ctgcccctcc gcacgctttt cctggaacga aatatcggtc caggcgccgc
      361 ggtagccgct cggcagagtc ttggcggcaa catcatccat cgccacaagc gcttggcccg
      421 aggaaatccc cggcgcaggg ccgccttgca ccgtggcggc gcgcgtattg ttgtaacgaa
      481 caagaccctg cggcccgaga acaacgcgca cttcaacgag actgcgcaac ggaaccatct
      541 tcccttccgc gctgcgcaca ttgatccggt agatgtcatc gaccgaggca cgatcttcgg
      601 cctccgcctg tacctggacc tgccatgtcc ggccgaacag gttcatgtcg ttgacgtaga
      661 agccgccaag cgaggtctgc aaagcctgaa atattgaact gatctcgacg ccaagaatcc
      721 gcgccttgtc gcggtcgata tcgaggaaga tcgacggatt cgccgcggag taagttgaaa
      781 acaccctgga caattgcgga ttttggttcg ccgcgatcac gagaccgcgc gtaacctgcg
      841 ccaggttctg cggcgggccg ccctgcacgt cctgaatcac gaatgaaaag ccgccgccgg
      901 tgccaagccc gatgatcggt ggcggctgca gggggacggc tgttgcaccg cgcagctgac
      961 ggagctgtcc ggcgagcctt ccgataatcg cgtcggcgct ttgctcgggg cctttccgtt
     1021 cgtcaaatcc cttgagcgtg gcgatgagga agccggcatt tgcctgcgaa aaattgtcga
     1081 taaaattgag gccgataatc gaacttacat ccgctatcgc ggattccttc tgcaggatcg
     1141 tctcgacctg atggactacg tcggacgtgc gtccgatcga tgcgccgtcc ggcaactgca
     1201 caacaacaaa aaatgcgccc tgatcgtcgg aaggaaggaa gccggtcggc gtcactcttg
     1261 acagcaaacc aacgccgccg aaggccgccc cgaccgcgat gatgccgatg atcgagattc
     1321 gcaccagccg cgcgacgaca atgccgtact gatcgcgaac ccaatcgatg gaacgcatca
     1381 tgacgccgat gacgccacgc ctgggaccgt gctgcggctt cagcagcacc gcacagagtg
     1441 caggcgacaa cgtaagcgcg ttgacggccg acagaaacat cgcaaccgca accgtcaccg
     1501 caaactgacg gaacagctcc cctgaaattc cggagataaa gcccaccggc acgaacacgg
     1561 cgagaagcac cagggttatc gctatgatgg gtgcgaaaat gccctgcatt gcgcgcttgg
     1621 tcgcctcggc cggcgacagc tcagggtgct gctccatggt ttgttcgacc gcctcgacaa
     1681 cgacaatggc gtcgtcgacc acgatgccga tggcgaggat catcgccagc agcgaaaccg
     1741 tgttggccga atatccgatc gcattaagga cgatgaacgt tccgatcaaa ctcaccggca
     1801 ccgcgaccat cggaatgagt gtggcgcgga cattgccgag gaagatgaaa acgacgagca
     1861 gaacaaggat cgccgcttcc accagggtat gtttgacggt ttcaattgtc gctgtaacaa
     1921 acgttgttgg atcgtaggtg atcttccacg cgacatcttc aggaaaattt ttcgcattat
     1981 cgttcatcag ttttttgagc gcctcgatgg tggtcagcgc attggcgccc ggcgactgat
     2041 agattccgat caggctcgat ggggatccgt ttagacgggt ggcccgatcc agatttgccg
     2101 cgcccaattg caggcgcgcg attgaaccca gccgcaaaac cgagccgtcg ggattggtgc
     2161 gaataatgat gttttcgaat tcctggaccg aacttagacg gcctttggtc tggatattca
     2221 gctgcaactg ctgatcgtcg gaaatcggcc gcgcgccgat gcgcccgacc gccgcctgca
     2281 cgttttgcga ctgaagtgcc gcgatgatgt cgctggtcgt gattccaagc ccggtcagct
     2341 gatcggtctt gatccacacg cgcatggcgt aatcctgcgg cccgaacagc gtcgcatcgc
     2401 cgacacccgg cgtgctcttg atttggtcga gaagattgat ggtgacgtaa ttcgaaagga
     2461 ataattcatc gcgcgtcttc ttcggcgaag acagtgcgat gactgcgagg agcgcggacg
     2521 acttcttttg cacgcgcacg cccgatcgcc tgacctcgtc cggcattttc gccagcgcca
     2581 cctgaacacg attgttcaca ttgaccgtat tgatgtccgg gtttgtgccg agctcgaacg
     2641 acaccagcag cgagtagctg ccgtcgttgc ccgaaatgct cttcatgtag atcatcttgt
     2701 cgacgccgat gacctgcgac tcgatcacct gcgccacggt ggtatcgacc acttccgatg
     2761 acgcgccggg atagcttgcg ctcaccgaaa cctgcggcgg cacgatgtcg ggcaactgcg
     2821 cgatagggat ggcgaggaga gaaaccaacc cggcgatcgc cgtcacaagc gcgatgacga
     2881 ccgcaagtcg cggccggtcg acgaaaatgg acgaaaacat tgcgtcagcc gccgatcggc
     2941 ttttccgccg gtacagccat
//
LOCUS       DATDHO010000016         3911 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_446087, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000016 DATDHO010000000
VERSION     DATDHO010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3911
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446087"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..563)
                     /locus_tag="VIY07_00285"
     CDS             complement(<1..563)
                     /locus_tag="VIY07_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY6380227.1"
                     /translation="MNEQLRRAPSPELLPRFAAIVGEKYAITDPASLEPFLIEGRGLY
                     HGRTSMLLRPGSVAEVQSILKLANETRTPLVPQGGNTGLVGGQIPFDGELILSLTRLD
                     KIREVDPASNAMTCEAGVVLANAQEAAAAADRLFPLSLGAEGSCTIGGNLATNAGGTG
                     AVAYGIARDLVLGLEIVLADGRVMNLLS"
     gene            complement(565..1536)
                     /locus_tag="VIY07_00290"
     CDS             complement(565..1536)
                     /locus_tag="VIY07_00290"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:TIGR00057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEY6380228.1"
                     /translation="MTAEPGTRILKADQDAIEAGSRSLSAGGLVAFPTETVYGLGADA
                     GNGAAVARLYAAKGRPSFNPLIAHVADTGSACRIGIFTPAAEKLAAAFWPGPLTLVVA
                     KRPDADIADLALAGLDTVGLRVPEHPVAHELLKAFKGAVVAPSANRSGHVSPTSATHV
                     LADLRGRIDLIVDAGPCAVGVESTIVSCVDHPTLLRPGGIPRDAIERVLGSPLATASA
                     IDDAPVAPGMLMSHYAPRAALRLDADTAQTGEALLAFGHAPPFSGTALNLSPRGDLIE
                     AAANLFSHLRALDASGARHIAVMKVPHEGLGEAINDRLKRAAAPRRL"
     gene            1592..1668
                     /locus_tag="VIY07_00295"
     tRNA            1592..1668
                     /locus_tag="VIY07_00295"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1626..1628,aa:Pro,seq:cgg)
     gene            complement(1900..2361)
                     /locus_tag="VIY07_00300"
     CDS             complement(1900..2361)
                     /locus_tag="VIY07_00300"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY6380229.1"
                     /translation="MTQFILIAAFAMALSWTAALAHKGHEHATGVVRERMESMTDMGE
                     RLLAISKRLRANKELDRIAADARAIKDASAKLTSQFPPGSTQFPTAAKPVVWQQWDDF
                     SEKAKKLQMEAEKLSTISQTDGDALRKQFRAVAYACDGCHETYRVPKENPR"
     gene            complement(2358..3509)
                     /locus_tag="VIY07_00305"
     CDS             complement(2358..3509)
                     /locus_tag="VIY07_00305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380230.1"
                     /translation="MRGFLGPYPIQREGSGTSWLPDTTPHFGVHATFGDWQTMYHALF
                     NVVYDHQGGPRGADKTFLNGMFMAMAQRPVGEGTWGLRAMLSPDPFMGKNGYPLLFAT
                     GETADGQSHLIDRQHPHELFMELATTYSYAFNKNSSVYVYAGLPGEPALGPSAFMHRT
                     SGMDIPEAPITHHWLDSTHITFGVLTAGVVLDTWKLEASAFRGREPDQHRYDIEAPKL
                     DSYSARISWNPIRELSFQVSWGHLKSPEQLEPDKNEDRFTMSAIYTQPFGNDNIWSTM
                     IAWGRKMMKPGDTLDGFILETAAIFQKRYTLFARAERVQENELLDVEPAPIFTVNKLT
                     VGGIYDFFRTDHAKFGIGGLVSFYGVPDGLKPFYGDPTSAMAFVRLKIE"
BASE COUNT          737 a         1175 c         1208 g          791 t
ORIGIN      
        1 gacagcaggt tcatgaccct gccgtcggcc aggacgattt cgagcccgag cacgagatcg
       61 cgcgcaatgc cgtaggccac agcacctgtt ccgcccgcat tggtagcgag atttccgccg
      121 atggtgcagc tcccctcggc cccgagagaa agtggaaaca gccggtcagc ggcggccgct
      181 gcctcttgcg cgttcgccag gacgacgccg gcttcgcacg tcatcgcgtt cgatgccgga
      241 tcgacttcgc ggatcttgtc gagccgcgtg agcgagagga tcagttcgcc gtcgaacggg
      301 atttgtccgc cgaccaggcc cgtattgccg ccctgcggca ccaacggcgt ccgggtctcg
      361 tttgccagtt tcaagatcga ctgcacctcg gcaaccgaac cgggccgcag caacatcgag
      421 gtgcggccgt gatagaggcc gcggccttca atcaggaaag gctcaaggct ggcgggatcg
      481 gtgatggcgt atttctcgcc gacgatggcc gcaaagcgcg gcagcagctc tggcgaaggc
      541 gcgcggcgga gctgttcgtt catgtcataa ccgtctcgga gccgcggcgc gcttgagacg
      601 atcgttgatc gcctcgccaa ggccctcgtg cggcaccttc attaccgcga tgtgccgggc
      661 accggaagcg tcgagcgcgc gcaggtgtga gaaaagattg gccgccgcct cgatgaggtc
      721 gccgcgaggc gacaggttca gcgcggtacc cgaaaaaggc ggggcatgtc cgaaggcgag
      781 cagcgcttcc ccggtctggg cggtgtcggc atcaaggcgc agggcagccc tcggcgcata
      841 gtgcgacatc agcattcccg gtgcgaccgg cgcatcgtcg atggcggacg cggtcgcgag
      901 cgggctcccg aggacgcgtt cgattgcatc gcgcggaatg ccgcccggcc gcagcaaagt
      961 ggggtggtcc acgcacgaca cgatcgtcga ttcaacgccc actgcgcagg ggccggcgtc
     1021 gacgatcaga tcgatgcgcc cgcgcaggtc ggcgagaacg tgcgtagcgc tggtcggtga
     1081 cacatggccc gatcgatttg ccgacggtgc gaccacggcg cctttgaacg ctttcagaag
     1141 ttcgtgtgcg acaggatgct ccggcacccg caacccgaca gtgtcaaggc cggcgagggc
     1201 gagatcggcg atgtcagcat ccggccgctt cgctacaacg agagtcagcg gcccgggcca
     1261 gaacgcggcc gccagctttt ccgcagccgg ggtgaaaatg ccgatgcgac aggcagagcc
     1321 ggtatcggcg acatgcgcga tcaatgggtt gaaggaggga cgtcccttgg ccgcgtaaag
     1381 ccgcgcgacc gccgcgccat tgccggcatc ggcgccgagc ccataaacgg tctcggtggg
     1441 aaaggcgacc aggccgccgg cggacaggga acgtgagccc gcctcgatag catcctgatc
     1501 ggccttcaaa atccgtgttc cgggctcggc ggtcatcgcc tctctcaagc ttgcgtttaa
     1561 ggacgccggg gttataagac cggccttcag tcggagtgta gcgcagtctg gtagcgcacc
     1621 acgttcggga cgtgggggtc gcaggttcaa atcctgccac tccgaccact cgcttcacta
     1681 agcggttcaa gcgtttagtg aacttcctga agcttcgcaa gaacatcaag cagtcccgct
     1741 ggcacacttg tggcacagcg agatttagtg ccgacggtgc gacggcgtga aagcgatggc
     1801 atatcgggtg cgccgcaaaa gccgcggggc tcagtcacac gttcgttcca acgcagcacc
     1861 gtcttagccc taaagttacg ttcgaacgga caccggactc tatcgagggt tttccttggg
     1921 tacccgatat gtttcgtggc agccgtcgca tgcatacgca acggctcgga attgtttgcg
     1981 caatgcatct ccgtcggtct ggctgattgt cgataacttc tcggcctcca tctgtaattt
     2041 cttggccttc tcgctaaagt cgtcccattg ctgccaaacc accggcttcg ccgccgtcgg
     2101 aaattgtgtg ctcccggggg gaaattgcga tgtgagtttt gccgacgcat ccttgatggc
     2161 acgcgcgtca gctgcgatgc gatcgagttc tttattggct cgaagccgtt tgcttatcgc
     2221 aagcaaacgc tcccccatgt ctgtcatcga ttccatgcgt tcgcgtacaa cgcctgttgc
     2281 gtgctcgtgg cccttgtgtg cgagggcagc agtccatgac agcgccattg cgaacgcggc
     2341 gatcaaaatg aactgtgtca ttcgatcttc aaccttacaa aagccattgc actggtcgga
     2401 tcgccataaa acggcttcag cccgtccggc actccataaa agctgaccag cccgccaatc
     2461 ccgaacttcg cgtgatcggt tcggaaaaag tcatagattc caccaactgt gagcttgttg
     2521 acggtgaaaa tcggagcggg ctcaacatcg agcagttcat tctcctgaac gcgttcggcg
     2581 cgagcgaaca gggtataccg cttttggaag attgccgctg tttcgaggat gaagccatcg
     2641 agcgtgtccc ccggcttcat cattttccgc ccccaagcga tcattgtgct ccagatgttg
     2701 tcgttgccga aaggttgcgt gtagatcgcc gacatcgtga agcggtcctc gttcttgtcg
     2761 ggctccagtt gctcgggcga tttcaggtgt ccccacgaga cttggaagct caattcccga
     2821 attgggttcc atgaaatgcg ggccgaatag ctgtcgagct ttggggcttc gatgtcgtag
     2881 cggtgctgat ccggctcccg gcctcgaaag gcggatgctt cgagcttcca cgtatccaaa
     2941 acgacaccgg cggtgagcac cccaaacgtg atgtgggtgc tatccagcca gtgatgcgtg
     3001 atcggcgctt cgggaatatc catgccgctc gtccggtgca tgaaggccga cgggccaagg
     3061 gcgggctccc ccggcagacc tgcatagacg tagacgctcg agttcttgtt gaacgcgtaa
     3121 ctgtaggtcg tcgcgagctc catgaagagt tcatgtggat gctgccggtc gattagatga
     3181 gactggccat ccgccgtttc accggtcgca aacaacaggg gatagccgtt tttgcccatg
     3241 aagggatcgg gcgagagcat cgctcgcaag ccccaagtcc cttctcccac cggacgctga
     3301 gccatcgcca tgaacattcc gttcaggaat gttttgtctg cgccgcgcgg tcctccttgg
     3361 tggtcgtaaa cgacgttgaa cagcgcgtgg tacatcgtct gccagtcccc aaacgtggcg
     3421 tgcaccccga aatggggcgt cgtatccggc agccagcttg tacccgaacc ttcccgctgg
     3481 atcgggtagg ggccgagaaa accgcgcatc ccatgttggt caccatgtgt cccagtgcct
     3541 tgatgtgtcc cgtcgtgggg cattggccgt gaatggccag cgtgcttttg atgttcgtca
     3601 gccgcacgct tcctttttgg cgccggccta tggccgccgt gttttgcatg ctcgctggaa
     3661 acacttttct tctttgtgcc ttccacgcgc ctgtggtcgt gagttcggct gcgctggcgt
     3721 tcagtctctt ccagctcttt caagatgtct tgcgcttgcc ctgtagacgg gcagacccaa
     3781 cagagcgcaa cgagactcat ggcggccagg aagccgcgca aagaggaatg cgtaagcatg
     3841 gaagctcctc atcgaaagga ccttgagccg caatgcggca atgaagcgtc caatcagaga
     3901 ggcttgggta t
//
LOCUS       DATDHO010000017         3605 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_198731, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000017 DATDHO010000000
VERSION     DATDHO010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3605
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198731"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..881)
                     /locus_tag="VIY07_00310"
     CDS             complement(<1..881)
                     /locus_tag="VIY07_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit alpha"
                     /protein_id="HEY6380231.1"
                     /translation="MSEEKRSAGIFNVGSPADPGAPRTYGLYDPALDKDSCGVGFIAD
                     IKGRKSHQLIADGLRILCNLEHRGAVGADPRMGDGAGILVQIPHKFFAKKTAELGFKL
                     PPTGEYAVGYLFMPQDPNWRQIIRDIYAEVIAREKLSLLGWREVPTDNSTLGESVKPT
                     EPKHMQVFIGRGKKKLSEDEFERRLYILRKSISNAIYRRRERRTAGYYPVSISCRTVI
                     YKGMFLADQLGTYYPDLHDPDFESALALVHQRFSTNTFPTWSLAHPYRYIAHNGEINT
                     LRGNVNWMAARQASVSSP"
     gene            complement(1359..1811)
                     /locus_tag="VIY07_00315"
     CDS             complement(1359..1811)
                     /locus_tag="VIY07_00315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HEY6380232.1"
                     /translation="MRTFDLAPLYRSTVGFDRVFSMLDGFESAPGYPPYNIERTGEND
                     YRVTVAVAGFGEKELSIEAKENTLTIKGNKQLKEEQNGEVLYQGIAARAFERVFQLAD
                     HVQVKSASLENGLLHVDLVREIPEAKKPRQIPIGNGKAKAEVIQTKAA"
     gene            2053..2997
                     /locus_tag="VIY07_00320"
     CDS             2053..2997
                     /locus_tag="VIY07_00320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6380233.1"
                     /translation="MKLVSIPANPVPDDVVTGAIKTSDGVNLRFARWAPPPGRKGTVV
                     VLQGRAEFIEKYFETVRDLRARGFAVATFDWRGQGLSDHALSDRHKGYVRNFSNYITD
                     LEAVMEQVVLPDCPPPIFALAHSMGAAVAIRASYDGSRWFERTVLSAPMIALPPGRLT
                     RMAGPLARFMRYLGRGGAYVPTGDASVAGTEGFLGNVLTSDPVRYARNAAILEEEPAL
                     GLGAPTVAWVDAALRQMGVFAEPSYSASIRQPILMVAAGRDEVVSTPAIETFGQNLLA
                     GRHLILAGARHEILQEQDHYRLQFWAAFDAFVPGTPRY"
     gene            complement(3021..>3605)
                     /locus_tag="VIY07_00325"
     CDS             complement(3021..>3605)
                     /locus_tag="VIY07_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEY6380234.1"
                     /translation="ILGEEYGSERTEAEYVWVLDPIDGTKSFISGMLAWGTLIGLMRF
                     GEPVFGLMHQPFTRERFSGDGGAARYRGPAGNRDLHVRECTSLDQAVMSTTSPLLMNL
                     ADRAAFAKLEDKVRLSRYGGDCYAYCMLAAGLIDLIIETEIKPYDIVAIIPIVAGAGG
                     MVTTWENGPAQSGGRIIVASDRRVHQAALEILNS"
BASE COUNT          677 a         1083 c         1073 g          772 t
ORIGIN      
        1 ggcgaggaca ccgatgcctg ccgcgctgcc atccagttga cattgccgcg cagcgtgttg
       61 atctcgccat tgtgcgcgat gtagcggtac ggatgagcca gcgaccaggt cgggaaggtg
      121 ttggtcgaaa aacgctgatg cacgagcgca agcgcgctct caaaatccgg atcatgcaga
      181 tcgggataat atgtgccgag ctggtcggcc aggaacatac ccttgtagat caccgtacgg
      241 caggagatcg ataccggata atagccggcg gtgcgccgct cgcgtctgcg atagatcgcg
      301 ttcgaaatcg acttgcgcag gatatagagc cggcgctcga attcgtcctc ggatagtttt
      361 ttcttgccgc ggccgatgaa cacttgcatg tgcttcggct cggttggttt gaccgattca
      421 ccgagtgtcg aattgtcggt tggcacttcg cgccacccga gcagcgagag cttctcgcgc
      481 gcgatgacct cggcgtagat gtcgcggatg atctgccgcc agttcgggtc ctgcggcatg
      541 aagagataac caacggcgta ttcgccggta ggcggcaatt tgaatccgag ctcagccgtc
      601 ttcttcgcaa agaacttgtg cgggatctgc accaggatgc cggcgccatc gcccattcgc
      661 ggatctgcgc cgaccgcgcc acgatgctcc aggttgcaaa gtatgcgcag cccgtctgcg
      721 ataagttggt gtgacttgcg acccttgatg tcagcaatga agccgacgcc gcaggaatcc
      781 ttgtcgagcg cgggatcgta cagaccgtac gtgcgcggtg cgccgggatc agcaggtgat
      841 ccgacgttga aaattcctgc gctacgcttc tcctcgctca tttcatcctg cctgccgcgc
      901 gccgaatgct cggcgtgctc accacatccg ggaggcaatc gccaccgcgg tcaacgcgca
      961 actgatctcg agaaaggaca accgtgtccg gcttgtcgcc gcccgtggct atccctcatg
     1021 ggcgccaccg atgcctgccc cgctttttga agccgccacc gaggccacca cctattagga
     1081 cagcattact gtcctaatag accatgccaa attttgcctc gccgcacaag gctggtccac
     1141 gtcggaatcg ctaaaatctt tccttttgtt gcgtcgtggc tccttaacca agcaagaaca
     1201 ggaccacctt ggagagatat gagcaatggc gttgcgccgc cagcagtcgg ggagtggaag
     1261 agtccgccga taaatccctt ggccacgctc aggcgggctt gtgatgcaaa aaagaggcgt
     1321 cccaaatcgg gacgcctctg ccttgcaatt cgatcgcgtt aggccgcttt ggtttggatg
     1381 acctcggcct tcgctttgcc gttgccaatc gggatctggc gcggcttctt ggcctcgggg
     1441 atttcgcgca cgaggtcgac gtgcagcaat ccattctcga ggctcgcgct cttgacctgg
     1501 acatgatcgg caagctggaa gacgcgctcg aaggcgcgcg cggctatgcc ctggtaaagt
     1561 acctcgccgt tctgctcttc cttgagctgc ttgttgcctt taatcgtcag cgtgttttct
     1621 ttcgcctcga ttgaaagctc tttttctccg aagccggcaa cggctacggt gacacggtaa
     1681 tcgttctcac cggtccgttc gatgttgtag ggcgggtagc ccggggcgga ctcaaaaccg
     1741 tcgagcattg aaaacacacg gtcgaagccg acggtggaac gatatagggg ggcaagatcg
     1801 aaagttcgca tggcatatcc tccattgttg agcgacatgc ggtggtccgc cgaatggcca
     1861 gacctaaccg tgcgcagcca tggggcctgc gcagccttga tatggtggcg ctttccggca
     1921 tcgcaagtct gcctgcgact actttcaaat atctgaaaat aaatatgttt tcgttgcgaa
     1981 ccgcggttgc attgaggacg cttgcgaccc tgctataagc gcttggcgcg catcgctcac
     2041 ttttcctgct tcatgaaact cgtctccatc cctgccaatc cggtgccaga cgacgtggtg
     2101 accggcgcga tcaaaacctc cgatggggtg aacctgcgtt ttgcgcggtg ggcgccgccg
     2161 ccggggcgca aaggcaccgt ggttgtgctg cagggccgcg ccgagtttat cgagaaatat
     2221 ttcgagaccg tccgcgatct tcgcgctcgc ggctttgcgg tggcgacttt cgactggcgc
     2281 ggacagggcc tgtcggatca tgcgctctcc gatcggcaca aaggctatgt gcggaatttt
     2341 tcgaattaca tcaccgatct cgaagccgta atggagcagg tggttctgcc cgattgtccg
     2401 ccgccgatat ttgcgctcgc tcattcgatg ggcgcggcgg tcgccattcg cgccagctat
     2461 gacggcagca gatggttcga gcgtaccgtt ctatcggcgc caatgatcgc gctgccgcct
     2521 ggacgcctga cgcgcatggc cggtccgctt gcgcggttca tgcgctactt gggacgcgga
     2581 ggggcttatg ttcccaccgg cgacgcttct gtcgctggca ccgaaggatt cctcggaaac
     2641 gtgctgacgt cggatcccgt acgctatgcc cggaacgctg caattctgga ggaagaacct
     2701 gcactgggtc tcggcgcacc aacggtcgcc tgggtggatg ccgcgcttcg acagatgggc
     2761 gtgttcgccg agccctcata ttccgccagc attcgccagc ccatcctgat ggttgcagcc
     2821 ggcagggacg aagtggtttc caccccggcg atcgagactt ttggacaaaa cctgcttgct
     2881 ggccggcacc tgatactcgc aggggccagg cacgaaatcc tccaggaaca ggatcactat
     2941 cgcctgcaat tctgggccgc gttcgacgct ttcgtgccgg gaacgccccg ttattagagt
     3001 ggacgtcggg ttgagttgag ctagctgttc aagatttcca gcgctgcctg gtggacgcgt
     3061 ctgtcgcttg ctacgatgat ccggccaccg ctttgcgcag ggccgttctc ccaggtcgtc
     3121 accatgccgc cggcgcccgc aacgatcgga atgatcgcga caatgtcgta cggcttgatc
     3181 tcggtctcga tgatcaggtc aatgagcccc gccgccaaca tgcaatacgc gtagcaatcg
     3241 ccgccgtagc gcgagagtct tactttgtcc tccagttttg cgaaggccgc gcggtccgcg
     3301 agattcatga gcagagggct cgttgtagac atcacggcct ggtcgaggct cgtacattcc
     3361 cgcacatgca ggtcgcgatt gccggctgga ccgcgatacc gcgccgcccc accatcgccc
     3421 gaaaagcgtt cgcgggtgaa cggctgatgc atcagcccaa acaccggctc gccaaatcgc
     3481 atgaggccga taagcgttcc ccacgcgagc atgcccgaga tgaaagattt ggtgccatcg
     3541 atcggatcga ggacccacac atattcggcc tcagtccgct cggagccgta ttcctcgccg
     3601 agaat
//
LOCUS       DATDHO010000018         2309 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_198823, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000018 DATDHO010000000
VERSION     DATDHO010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2309
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_198823"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..760
                     /locus_tag="VIY07_00330"
     CDS             <1..760
                     /locus_tag="VIY07_00330"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380235.1"
                     /translation="RITGRGNTANLESVLALKPDLILDVGSTSATFVSLAERVQEQTS
                     IPYALLDGRFDATAETYRKLGKLTGRQAEAEKLARYADNTLKTIMGRIAAIEPSARPR
                     VYYARGPRGLVTGLGGSINVETIEMLAENVAGANKGGLANISIEQLLLWNPDVIVTID
                     QDFAASVRGDRALASLKAVRDGRVHLSPKMPFGWVDFPPSANRLIGLWWLAKILYPDK
                     FPEDIRSQTRDFYTMFYHRTPDNAQIDHVLAGRD"
     gene            761..1774
                     /locus_tag="VIY07_00335"
     CDS             761..1774
                     /locus_tag="VIY07_00335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019905747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEY6380236.1"
                     /translation="MTRSALPGLAIATGVLIAGLLLAFTIGRYPVSLAELGHVLFAKI
                     SGHRPDVSPAVESVILQVRGPRVLAAALVGAALAVAGTAFQGLFRNPLVSPDILGASS
                     GAALGAVIGIFLSLGVLAIQGLAFVGGLFAVAAVYVIGSAVRARDPILVLVLTGVVVG
                     ALLGAGVGLVKYLADPYNQLPAMTFWLLGSLAAANVSDLLPLFGPVAIGTTVLIALRW
                     RMNVMSLPEEEARSLGVATGPLRVAIVAAATLTTSASVATAGIIGWVGLVVPHLSRSL
                     VGPDFARLLPTAAILGGGYLLLIDTLARTAAEVEIPLGILTAVIGTPFFIWLLASMQR
                     TWS"
     gene            1771..>2309
                     /locus_tag="VIY07_00340"
     CDS             1771..>2309
                     /locus_tag="VIY07_00340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380237.1"
                     /translation="MNIEGRDLTIGYPDHTVGRGLDVALSTGEVLALLGPNGGGKTTL
                     LKTLLGLLRPKAGEVRLGDKPLDEYTVRERARVIAYVPQVHIGTFAFTVETVVMMGRT
                     AHGNLFSRPTMHDRTIAYSVLERFGISALASRPYTMISGGERQLVLLARALAQEPRFI
                     VLDEPTASLDFGNQGKVMN"
BASE COUNT          368 a          743 c          723 g          475 t
ORIGIN      
        1 ccgcatcacg gggcgcggca atacagccaa tcttgaaagc gtgcttgcac tcaagcctga
       61 cctgattctc gatgtcggct cgaccagcgc aacttttgtc tccctggccg agcgcgtgca
      121 ggagcaaacc agcattccct atgccttgct ggacggccgt ttcgatgcca ccgcggagac
      181 ctaccgtaag ctcgggaagc tcaccggacg gcaagccgag gcggaaaagt tggcgcgcta
      241 tgcggacaat accctcaaga ccataatggg ccgcatcgca gcgatcgaac cttcggcccg
      301 gccgcgcgtc tactacgcgc gcggcccgcg cggcctggtc accggccttg gcggctcgat
      361 aaatgtcgaa acgatcgaga tgttggccga gaacgttgcc ggcgcgaaca agggcgggct
      421 cgccaatatt tcgatcgagc agctgctgct ttggaatccc gacgtgattg tcaccatcga
      481 ccaggacttt gctgccagcg tgcgcggcga ccgcgcgttg gcatccttaa aagccgtgcg
      541 cgacggccgc gtgcatctct cgccgaaaat gccgtttggc tgggtggatt ttccgccgtc
      601 ggcgaaccgc ctgatcggac tttggtggct ggcaaagata ttgtatccgg acaaatttcc
      661 ggaagacatt cgctcccaga cgcgcgattt ctatacgatg ttctatcacc gcacgccgga
      721 caacgcgcag atcgatcatg tgctggccgg gagagactag ttgacccgct ccgcgctccc
      781 cgggcttgcg atcgcaaccg gcgtgctgat cgcggggctg ctgctcgctt ttacaatcgg
      841 ccgctacccg gtctcgcttg ccgagctcgg ccacgtgttg ttcgcgaaga tcagcgggca
      901 tcggccggac gtgtcccctg cagtcgaaag cgtcatcctg caagtgcgcg gtcctcgcgt
      961 gctcgcggcg gcgcttgtcg gcgcggcgct tgccgtcgca ggaacagcgt tccagggcct
     1021 ctttcgcaat cccctggtat cgcccgacat tctcggcgct tcgtcaggcg cggctttggg
     1081 agccgtgatc ggcattttcc tttccctcgg cgtgcttgcc attcagggac tcgccttcgt
     1141 cggtggcctg ttcgccgttg ccgcggtgta cgtcatcggc tcggcggttc gcgcccgcga
     1201 tccgatcctt gtgcttgtgt tgaccggtgt cgtcgtgggc gcgctgctcg gcgccggtgt
     1261 cggtctcgtg aagtatctcg ccgatcccta caaccagttg ccggccatga ctttctggct
     1321 gctcggcagc ctggccgccg caaatgtctc ggacctgctg ccactgttcg ggccggtcgc
     1381 aattggcact actgttttga tcgcgttgcg ctggcggatg aacgtcatgt cactacctga
     1441 agaggaggcg cggtcgctcg gcgtcgcgac tggaccgctg cgagttgcaa tcgtggccgc
     1501 ggcaacgctc accacgtcgg ccagcgtcgc gaccgcagga atcatcggtt gggtcggtct
     1561 ggtggtcccg catctctcgc gttccctggt cggtcccgat ttcgcgcggc tgctgccgac
     1621 ggcagcaatc ctgggaggcg gctatctgct gctgatcgac acgctcgcgc gcaccgcggc
     1681 ggaggtggag attccgctgg gcattctgac ggcggtgata ggcacgccat tcttcatctg
     1741 gctcctggcc agcatgcaaa ggacctggtc gtgaatatcg agggccgcga cctcaccatc
     1801 ggttatccgg accataccgt cggccggggc ctcgatgtcg ctctctcgac cggtgaggtc
     1861 ctcgccctgc tgggaccgaa cggtggtggc aagaccaccc tgctcaagac cttgcttggc
     1921 ctgctcaggc caaaggccgg cgaggtccgc cttggcgaca agccactcga cgaatacaca
     1981 gtccgcgaga gggcgcgcgt gattgcctac gtaccgcagg tccatatcgg cacctttgct
     2041 ttcaccgtgg agacggtggt gatgatgggt cgcaccgccc acggcaacct gttcagccgg
     2101 ccgaccatgc acgatcgcac gatcgcatac tctgtgctcg agcgctttgg catttcagcg
     2161 cttgccagcc ggccctacac catgatttcc ggcggcgagc ggcagctcgt tttgctcgcg
     2221 cgagctctgg cgcaggagcc gcgcttcatc gtgctcgacg agccgacggc gagtcttgat
     2281 ttcggaaatc agggcaaagt gatgaacga
//
LOCUS       DATDHO010000019         2597 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_894, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000019 DATDHO010000000
VERSION     DATDHO010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_894"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            290..1261
                     /locus_tag="VIY07_00345"
     CDS             290..1261
                     /locus_tag="VIY07_00345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6380238.1"
                     /translation="MKPQVVCALVMLTLAAIFTDAAYAEYPERNVTVIVPFPPGGASD
                     VTARLTGNKLAERLGKSIIIENRAGANGGLGATGAKSAAPDGYTLLIGSIGVYAINPV
                     LYKNLKYDPLKDFDLLSLLVRTPNVLVTSSDFPVKSAGDLIAHLKKNPNQVTFASSGI
                     GSSDHLTAVLFWQNTGTSGVHVPYKGGGPAINDLMGGHANASFQNLGAVAQHIKAGKL
                     KALAVTGEKRAAALPDVPTTAEAGIPDLVVYSWQAAAAPKGLPADVRAKLESEIAATV
                     SSPDVKKQFNDIGFDVVGSNGPQFREFLVGETQRWKKVVEAGNITAE"
     gene            1271..>2597
                     /locus_tag="VIY07_00350"
     CDS             1271..>2597
                     /locus_tag="VIY07_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012322053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEY6380239.1"
                     /translation="MIDRGRGSPVVAEMLVIPVAGEDSMLLNLSGAHGPLFTRNIVIL
                     RDNAGHTGAGEVPGGNAIQQTLEDARPLVVGRSIASYNDVLNAIRKEFASRDLGGRGQ
                     QTFDLRTTVHAVTAIETALFDLLGQFLNVPLAALLGEGQQRQAVRMLGYLFYVGDRKR
                     TNLPYRGATNANDDWLRLRDEEALTPAAVVRLAEAAQDRYGFQDFKLKGGVLRGEEEM
                     TAVRALAHRFPGARITIDPNGAWSLEEAVKLCRRRHDILAYAEDPCGAEKGYSGREIL
                     AEFRRATGLSTATNMVASDWREMSHAIQLHAVDIPLADPHFWTLQGSVRVAQMCRDWG
                     LTWGSHSNNHFDISLAMFTHVAAAAPGDITAIDTHWIWQDGQRLTKEPLKIVKGSVLV
                     PERPGLGIEVDMAQIESAHRRYKSIALGARDDAVAMKFLIPEWKFDPKRP"
BASE COUNT          550 a          759 c          790 g          498 t
ORIGIN      
        1 tgcccggcag caccgggaat tcgcggcgtt cggggttgcc acattttgag acacgatgcg
       61 cgacaaagac attgccctaa ggggcaatag tcgcggctgt gaatggacag tcaaaagcca
      121 aacgggcgta cccattatca cgtcgtctgc cagaaaatcc gtaatcagaa ttgagaggac
      181 gtcttttgcc accgctgatt taggccgcgc catccgacag attttcgggc attctacgga
      241 caagtcgctt cagattaaga ggcgaccttg tgctcgggag ggatcagcaa tgaagcccca
      301 ggtcgtgtgt gcactcgtta tgttgactct tgcggctatt ttcaccgatg cggcttatgc
      361 cgaatacccg gaacgcaacg tcaccgtcat tgtgccgttt cctccaggcg gcgcttcgga
      421 tgtcaccgcg cggctgaccg gcaacaagct ggcggagcgt ctcggaaaat ccatcatcat
      481 cgagaaccgc gcgggcgcaa atggcgggct cggtgccacc ggcgcgaaat cggccgcgcc
      541 tgacggctac accctcctga tcggatcgat cggcgtctat gcgatcaatc cggtcttgta
      601 caagaatctg aaatacgacc cgctcaagga cttcgatctg ttgtcgctgc tggtgcgaac
      661 gccaaatgtg ctggtcacga gctcggattt tccggtcaaa agcgccggcg atctgatcgc
      721 gcatctgaag aagaatccca atcaggtgac attcgcgtcg tcgggcatcg gctcgtcgga
      781 tcatctgacg gccgtattgt tctggcaaaa taccggcacg agcggcgtgc atgtgcctta
      841 caaaggcggc ggcccagcga tcaatgacct tatgggcggg cacgccaacg cttcgtttca
      901 gaatctcggc gccgttgcgc agcatatcaa agcgggcaag ctgaaggcgc tggcggttac
      961 cggcgagaaa cgtgcggccg cgctgcccga cgttccgacc acggccgagg caggcatccc
     1021 cgatcttgtt gtctactcct ggcaagctgc ggcggcgccg aagggtctgc ccgccgatgt
     1081 acgggccaaa cttgaatcgg aaatcgccgc gaccgtcagt tcacccgacg tcaaaaagca
     1141 gttcaatgac atcggctttg acgtggtcgg cagcaacgga ccacaattca gggaattcct
     1201 ggtcggcgaa acgcagcgct ggaaaaaagt ggtcgaggcg ggaaacatca ccgcagagta
     1261 aaaatcggcc atgatcgatc gaggcagggg ttcaccagtc gtcgctgaaa tgctggtgat
     1321 ccccgtggcc ggcgaagaca gcatgctgct caacctgagc ggcgcgcatg gcccgttgtt
     1381 cacccgcaac atcgttatcc tgagagataa tgccggtcat accggcgcgg gcgaggtgcc
     1441 gggcggaaac gccatccagc agacgctcga ggatgcgcgg cccttggtcg tggggcgatc
     1501 aatcgcctcc tacaatgatg ttctcaatgc catccgcaaa gaatttgctt cccgcgacct
     1561 tggcgggcgc ggccagcaaa cgttcgatct tcgcacgacg gttcacgcgg tcacggccat
     1621 cgaaaccgcg ctgttcgatc tgctcggaca atttctcaac gttccgttgg cggcgctgct
     1681 cggagagggt cagcagcgcc aggccgtaag aatgctcggc tatctcttct atgtagggga
     1741 ccgcaagcga accaacctgc cgtatcgcgg cgccacaaac gcaaacgatg actggctccg
     1801 gctacgcgac gaagaagcgt tgacgccggc ggctgtcgta cggctcgcag aggcggcgca
     1861 agaccggtac ggatttcagg acttcaagtt gaagggcggg gtgctaagag gcgaggagga
     1921 gatgaccgcg gtgcgtgccc tagcgcaccg attccccggc gcgcgcatca ccattgatcc
     1981 caacggggcg tggtcgctgg aggaagctgt gaagctgtgc cgcagacggc acgatatcct
     2041 ggcctatgcc gaagatccct gcggggccga gaaaggctat tccggccgcg aaattttggc
     2101 ggagtttcgc cgcgcgaccg gtttgtctac ggcgaccaac atggttgcct ccgattggcg
     2161 cgagatgagc catgccatcc aacttcacgc ggtcgatatt ccacttgccg atccgcattt
     2221 ctggacgctg caaggatcgg tgagggttgc acagatgtgc cgcgactggg gcctcacctg
     2281 gggatcgcat tcaaataatc atttcgacat ctcgcttgcg atgttcaccc atgtcgcggc
     2341 tgcggctccg ggcgacatca ccgcaatcga cacgcattgg atatggcagg atggccagcg
     2401 tctgaccaag gagccattga aaatcgtcaa aggctccgtg ctcgttccag agcggccggg
     2461 cctcgggatc gaagtcgaca tggcccagat cgaatcggcg catcgccgtt acaaaagcat
     2521 tgcgctcggc gcgcgcgacg acgcggttgc gatgaaattt ttgattccag aatggaaatt
     2581 cgaccccaag cgcccgt
//
LOCUS       DATDHO010000020         2340 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_396904, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000020 DATDHO010000000
VERSION     DATDHO010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2340)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2340)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2340
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_396904"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VIY07_00355"
     CDS             <1..186
                     /locus_tag="VIY07_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HEY6380240.1"
                     /translation="PYFVANHFTIADIALYAYTHVAEQADFHLSRFPAIRAWLARIAD
                     EPGYIPMTWQPELVPAK"
     gene            329..616
                     /locus_tag="VIY07_00360"
     CDS             329..616
                     /locus_tag="VIY07_00360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380241.1"
                     /translation="MPKHIESTGFTSPADRLGTERGLAALAQLAASIALVLSILVAAT
                     AVARADVAANVIDDESSLFAVALLLGLFFIGIGSLTVLPQPHHSRHPETNR"
     gene            678..1808
                     /locus_tag="VIY07_00365"
     CDS             678..1808
                     /locus_tag="VIY07_00365"
                     /EC_number="1.1.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_function: GO:0070968 - pyrroloquinoline quinone binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY6380242.1"
                     /translation="MRFLLLLSAVLTAAAIARAADAVYPSSAGNLAVQTVATGLAHPW
                     SLAFLPDGRMLVTERPGRMRLVAPNGRLSSPLANVPKVFAASQGGLLDVILDREFAQN
                     RTIYFSYSEPFNGGGRTALARARLDDREVPRLTDVKVIYRQYGPPSHGNHFGSRIVQA
                     TDGTLFVTNGEHFTDRDMAQTLDNDLGKIVRITTDGTPPPDNPFANKPGARPEIWSYG
                     HRNPQGLALNPADGKLWEQEHGARGGDEINIIEKGHNYGWPRVSYGVNYDGTPVGTGK
                     AKMAGVDDPRWHWTPSIAPSGMAFYTGDLFPAWKGSLFSGALKSQLLSRLELKGDTVV
                     KEERLLQALQERIRDVRQGPEGALYLLTDSTSGRILRVVPAR"
     gene            complement(1809..2158)
                     /locus_tag="VIY07_00370"
                     /pseudo
     CDS             complement(1809..2158)
                     /locus_tag="VIY07_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387062.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family protein"
BASE COUNT          488 a          707 c          682 g          463 t
ORIGIN      
        1 ccgtatttcg tcgcgaacca cttcaccatt gcggacatcg cgttgtacgc ctacacacac
       61 gtcgccgaac aggccgattt ccacctcagc cggtttccgg cgattcgcgc ctggcttgcc
      121 cgcattgccg acgaaccggg ctacatcccc atgacctggc agccggagct ggtgccggcg
      181 aaataacgcc tggaatctca aggcttttta tcgcgcgcca tgaaatcgcc gcgcttcgta
      241 accggctgcg cccaattcga gtcgaaccgt tgccgagttc ccacgttatg gaaacgagat
      301 tgtacatacg accgtttcaa ggttcgtcat gccaaagcac attgagtcca cgggctttac
      361 gtcaccggcc gatcgcctcg gtaccgagcg tgggttggca gcccttgccc aattggccgc
      421 cagcatagcg ctcgtgctgt ccatcctcgt agctgccacg gcagttgcac gcgctgatgt
      481 ggcggccaat gtgatcgacg atgagagcag cctgttcgcc gttgcgttgt tgctgggctt
      541 gtttttcatc ggaataggca gcctcacggt tctgccgcag ccgcatcatt ctcgccaccc
      601 cgaaacgaac cgctgattac ccctaccgga actctccgcg atggcgcaaa gttgacgcga
      661 cagcgaggga gacttgcatg cgattcctgc tgctgctgag tgcggtgttg accgcagccg
      721 cgattgcgag ggcagccgat gcagtttacc cgagctcagc cggcaatctt gcggttcaaa
      781 cggttgccac tggcctggca catccctggt cgctcgcgtt cttgcccgac ggccgcatgc
      841 ttgtcaccga acggccagga cggatgcgtc tcgttgcgcc caacggtcgg ttgtcatccc
      901 cgcttgccaa cgtgccaaaa gtatttgccg ccagccaggg cggtttgctc gacgtgatcc
      961 ttgaccgcga attcgcccag aaccgcacaa tctacttttc gtactccgag ccattcaacg
     1021 gcggcggacg gacggcgctt gcccgcgcgc ggctcgatga tcgcgaggtg ccgaggctga
     1081 ctgatgtgaa ggtcatatac cgtcagtacg gcccgccttc gcatggaaac catttcggta
     1141 gccgaatcgt ccaagcaact gatggcacct tgtttgtgac caacggcgag cacttcaccg
     1201 atcgcgacat ggcgcaaacg ctcgacaacg atctgggcaa gatcgtgagg ataaccaccg
     1261 acggcacgcc gccgcctgat aatccgtttg ccaacaagcc tggggccagg cccgagatct
     1321 ggtcctatgg tcatcgcaat ccgcaagggc tggcgttaaa tcccgctgac gggaaactat
     1381 gggagcagga gcacggagcc agaggcggcg acgagatcaa catcatcgag aaaggccaca
     1441 actacggctg gccgcgtgtg agctatgggg tcaactatga cgggacgccg gtcgggaccg
     1501 gaaaggcaaa aatggcgggt gtcgacgatc cgcgctggca ctggacgcca tcaatcgcac
     1561 cgtcgggcat ggcgttctac acgggcgatc tgtttccggc ctggaagggc agtctcttta
     1621 gcggggcgct gaaatcccag ttgctgtcgc ggcttgagct caaaggagac acagtggtga
     1681 aggaggagcg ccttctgcag gccttgcagg aacgcatccg tgatgtgcgc cagggaccgg
     1741 agggcgcgct ttacctgctc accgacagca catccgggcg catcttgcgc gttgtgcccg
     1801 cgcgctagtc accacttgtg aaacacgaaa aaagcgccgg ccgcaatcag cgcgaaaccg
     1861 acgccctgac tgagcgttat ggctcgcgca aatagacgta tgaaaatccg gcgaacacca
     1921 caaaggtgat gacctcctgg atcgtcttca attgtgccgg atcgtaaacg gcgttgccgt
     1981 agcgattggc gggcacagcc aggcaatatt cgataaaggc gactccccag ctgatgaaga
     2041 tcacgtaaaa aagtggcact tccttataac gaaggtgcca ataccaggcg gcggtcatga
     2101 atacgttgga cccgacaagc agaacgatcg gacgaacgta aggcaatagt gcaagcatgg
     2161 aactccttga ggcgagcgtg ggcgcatcgg aggggcccgc atctacacgc tcatgccgtc
     2221 aaagccaatc gggcatctgc atgttcgtca gcggtgcact aatagcctcg tcgctgagtt
     2281 gccactctgc agttcttttg ctgccatcta tctgtgctag ctttgacgca tgctctttcg
//
LOCUS       DATDHO010000021         5015 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_50286, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000021 DATDHO010000000
VERSION     DATDHO010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5015)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5015)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5015
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50286"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1004)
                     /locus_tag="VIY07_00375"
     CDS             complement(<1..1004)
                     /locus_tag="VIY07_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEY6380243.1"
                     /translation="MNFEEHAAKSLVLRAAGIPVPQGVLCTNAAEAAMAAAKLGPCVI
                     KAQVPAGKRGKAGGIKRAGTPDEARKAATQILGMRIGDFTVERLLVEEQATIAREFYA
                     AVLHDVASCKPLILFSTEGGMDIEEIAAARPDAIRRMPVEVDHPPSQKDFAAMLSGVD
                     LGTAATQITAILERLYAAYRTYDAELLEINPLALLTDGRVIALDCKFVLDDASAYRQA
                     ELAKAGAAGIMTPLEKRGAAHGLKLIQLDGNVGVLANGAGLTMTTMDVIRHFGGRPAN
                     FLEIGGEAYTKSEIALDLVLSNPGVKSLVVNFCGAFARTDVMAEGVVKAWHKLKPKVP
                     V"
     gene            complement(1071..2495)
                     /locus_tag="VIY07_00380"
     CDS             complement(1071..2495)
                     /locus_tag="VIY07_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013420967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY6380244.1"
                     /translation="MTVGMKPVADSKATAVVDELVRRARAAMAIFANADQARVDEAVT
                     ALAWSLYNPAHAKELAELAVKDTQLGNVSDKVIKKQRKTFGTLRDLLRVKSVGIIEEN
                     EKLGIVKYAKPVGVVCAITPSTNPGATPVNKAMMAIKGRNAIVIAASPAGLKTTAKTV
                     DYMRAELKKIGLPEDLVQILPPPASKDMTHTLMQAADLVVATGSQDNVRRAYSSGTPA
                     IGVGTGNVPVIVDETADLADAAEKICASKIFDNSTSCSSENSVILVDAIYDKAIAALE
                     RAGGYKASSAEKAKIQAALWPDGKLSRTLIARDADVFARGCGLPTAAEGKKFFMVEET
                     GVGRDFPFSGEKLSLVLTVYRAKDFDEAVTRANEILAHQGRGHSVGLHTKDVRRGRLL
                     AERSDVVRVLINQAHTFGNGGGFDNGLNFTLSMGCGTWGGNSITDNLNYMNFLNITHL
                     VTTIAEDKPSEEALFGAYWKKYGK"
     gene            complement(2556..4331)
                     /gene="xsc"
                     /locus_tag="VIY07_00385"
     CDS             complement(2556..4331)
                     /gene="xsc"
                     /locus_tag="VIY07_00385"
                     /EC_number="2.3.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050487 - sulfoacetaldehyde
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0019529 - taurine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoacetaldehyde acetyltransferase"
                     /protein_id="HEY6380245.1"
                     /translation="MKMTTEEAFVKVLQMHGIEHAFGIIGSAFMPISDLFPKAGITFW
                     DVAHETNGGLICDGYTRSTGKIAMAIAQNGPGITNFVTSIKTAYWNHTPMLLVTPQAA
                     NKTIGQGGFQEVEQMALFRDMVCYQEEVRDPSRVAEVLNRVITKAKRLSAPAQINIPR
                     DYWTQVIDIGMPAIVEFERPAGGAQAVTEAAKLLSAAKFPVILSGAGVVLGDAIPECV
                     ALAEKLDAPVCNNYQHNDSFPGSHRLAVGPLGYNGSKAAMELVAKADVVLALGTRLNP
                     FSTLPGYGIDYWPKTAKIIQIDINADRIGLTKPVTVGICGDAKLVAKSILAQLAPSAG
                     EVGREERKALIHTTKSRWLQSLSSMDHEEDDPGTTWNADARKRDADRMSPRQAWRAIQ
                     AGLPKDAIISSDIGNNCAIGNAYPTFDSGRKYLAPGLFGPCGYGFPSIIGAKIGNPDT
                     PCVGFAGDGAFGISMSEMSSIGREEWPGITMVIFRNYQWGAEKRNSILWFDNNFVGTE
                     LDPHLSYAKVAEACGLKGVVVKTQAELTEALRQACEAQKKRVTTFIEVILNQELGEPF
                     RRDAMKKPVVVAGIKREDMRAQQVA"
     gene            complement(4362..>5015)
                     /locus_tag="VIY07_00390"
     CDS             complement(4362..>5015)
                     /locus_tag="VIY07_00390"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEY6380246.1"
                     /translation="KATAYRLVDWFVTQGYLSREPARRRLIIGPKLTNLAFGALSSSM
                     RHDTPHVVLQRLVHTLNETCNIGTLVNGEVVYLDRVEAEHWPLRLHYTVGSRVPLHCS
                     AIGKLFLALAASPRRRRLLQSMDLRRFTDSTITDSTRLETELRQIRKEQVSFDREEYL
                     VGVVCMAVPVIGKNGEMLAALAIQAPQARMNVQSARRHLPALRHAAAELAEIFQNRA"
BASE COUNT          930 a         1543 c         1462 g         1080 t
ORIGIN      
        1 accggcacct tcggcttgag tttatgccag gccttgacga cgccctccgc catcacatcg
       61 gtgcgcgcaa aagcgccgca gaagttgacc accaggcttt tcacgcccgg attggacagc
      121 acgagatcga gcgcaatttc ggatttggtg taggcctcgc cgccgatttc aagaaagttt
      181 gccggacgac cgccaaaatg tctgatcaca tccatcgtgg tcatcgtcag tccggcgccg
      241 ttcgcgagca cgccaacatt gccatcgagc tggatgagct tgaggccatg cgcggccccg
      301 cgcttctcaa gcggagtcat gatcccggca gcaccggctt tggcgagctc ggcctgccgg
      361 tatgccgacg cgtcgtcgag cacaaatttg cagtcgagcg cgatcacgcg accgtcggtc
      421 agcagcgcca gtggattgat ttccaggagt tcagcgtcgt acgtgcggta ggcggcgtag
      481 agcctttcca gaattgccgt gatttgcgtc gccgcggtcc caagatcgac ccccgaaagc
      541 atggcagcga agtctttttg actcggggga tgatcgacct cgaccggcat tcggcggatc
      601 gcgtccggcc ttgccgcagc gatttcctcg atgtccatgc cgccttcggt tgagaacagg
      661 atcagcggtt tgcacgatgc gacgtcatgc aacactgcgg catagaattc gcgcgcgatc
      721 gtggcctgct cctcaacgag caaccgttcg acggtaaagt ccccaatcct catgccaagt
      781 atttgcgtgg cggccttccg ggcttcgtcc ggcgttccgg cgcgcttgat gcctccggcc
      841 ttgccgcgct tgcccgcggg cacctgcgcc ttgatcacgc aaggcccgag cttggcggct
      901 gccatggccg cctcggccgc atttgtgcag agaacaccct gcggcaccgg gatgccggcg
      961 gcccgcaaaa ccaacgactt ggccgcgtgc tcctcgaagt tcatcaccaa ctctcacttg
     1021 ccttgcattg accctcgtcc gaaccggcaa ccgttttccg gggtcactcg ctatttgcca
     1081 tatttcttcc aatacgcgcc gaacagcgct tcctcactcg gcttgtcttc cgcgatggtg
     1141 gtgacgaggt gggtgatatt gaggaaattc atataattca gattgtctgt gatgctgttg
     1201 ccgccccagg tcccgcaacc catgctgagc gtgaagttca gaccgttgtc gaacccaccg
     1261 ccattgccga atgtgtgcgc ctggtttatc aatacacgca caacgtccga gcgttcggcg
     1321 agcaggcggc cacgacggac atccttggtg tgcagaccga ctgaatggcc gcgaccctga
     1381 tgggcaagaa tttcattggc gcgcgtgacc gcctcgtcga aatcctttgc gcggtaaacc
     1441 gtcaaaacga gcgacagttt ctccccggag aaggggaagt cgcggccgac accggtttcc
     1501 tccaccataa agaacttctt gccttcagcg gcagtcggca aaccgcatcc acgtgcaaaa
     1561 acgtcggcgt cgcgggcaat cagggtgcgg ctcagcttgc cgtccggcca tagcgccgcc
     1621 tggatttttg ctttttcggc actggacgcc ttatagcccc ctgcgcgctc gagcgccgcg
     1681 atggccttgt cgtatattgc gtcaacgaga atgaccgaat tttccgacga gcacgacgtg
     1741 gaattgtcga agatcttgga cgcgcagatt ttttcagccg cgtcggcgag atctgctgtc
     1801 tcatcaacaa tgaccggcac attgccggtg ccgacgccaa ttgccggcgt cccgctggag
     1861 taggcgcgcc gcacattatc ctgcgagccg gtggccacaa ccaggtcggc agcttgcatc
     1921 agcgtatggg tcatgtcctt cgacgccggt ggcggcagga tttgcaccag atcctcgggt
     1981 aaaccgatct ttttcagctc cgcccgcata tagtcgactg tcttcgcggt cgtcttcaga
     2041 ccggcgggag aagccgcgat gacaatggcg ttgcggccct tgatcgccat catcgccttg
     2101 ttgaccggcg tcgcgccggg attggtcgag ggcgtgatgg cgcaaacgac ccccaccggc
     2161 ttcgcatact tcacgatgcc aagcttctcg ttctcttcga tgatgccgac cgacttcacc
     2221 cgcagcaaat cgcgcaaggt tccgaaagtc ttgcgctgct tcttgatgac tttgtcggat
     2281 acattgccga gctgggtatc ctttaccgcc agctcggcca actctttggc gtgggcagga
     2341 ttgtagagcg accaggcgag cgcggtcacc gcctcgtcga cccgagcctg atcggcattg
     2401 gcgaaaatcg ccatcgcggc gcgggcgcgc cgcaccagtt cgtcgaccac agccgtcgcc
     2461 ttggaatcgg ccactggttt catgccgacc gtcatttgct cagcctccac gttttgctgc
     2521 gcacgatctt cttcgcaaca tttcggatcg tccgctcaag cgacctgctg cgcgcgcata
     2581 tcctcgcgct tgatgccggc cacgaccacc ggtttcttca tcgcgtctcg gcggaacggt
     2641 tcgccaagct cctgattcag gatcacctcg atgaaagtcg tgacgcgttt cttctgcgcc
     2701 tcgcaggcct gccgaagcgc ctcggtcagc tcggcctgcg tcttcactac tacgcccttg
     2761 aggccgcagg cctccgctac ctttgcatag ctgagatgcg gatcgagctc ggtgccgaca
     2821 aaattattgt cgaaccagag gatcgaattg cgtttctcgg cgccccattg gtagttgcgg
     2881 aatatcacca tggtgatgcc cggccactct tcgcgaccaa tcgaactcat ctcgctcatc
     2941 gagatgccga acgcgccgtc gccggcaaag ccgacgcagg gcgtgtccgg gttgccgatc
     3001 ttcgcgccga tgattgaggg gaagccgtag ccgcaagggc cgaacaatcc cggcgcgaga
     3061 tacttgcggc cgctgtcgaa ggttggatag gcattcccga tcgcgcaatt gtttccgatg
     3121 tcgctcgaga tgatggcgtc cttcggaagt cccgcctgga tcgcacgcca ggcctgccgc
     3181 ggcgacatgc ggtcggcatc gcgcttgcga gcgtctgcat tccacgttgt gcccggatcg
     3241 tcttcctcat gatccatgct ggagagagac tgaagccagc gcgattttgt cgtgtggatt
     3301 aaagccttgc gctcctcgcg accgacctcg ccggcggaag gcgcgagttg agccagaatg
     3361 ctcttggcaa cgagcttggc gtctccgcaa atgccgacgg tgacgggctt ggtcaggccg
     3421 atccggtcgg cgttgatatc aatctggatg attttggcgg tcttcggcca gtagtcgatg
     3481 ccatagccag gaagggtcga aaacggattg agacgcgtgc cgagcgcgag caccacgtcg
     3541 gcttttgcca cgagctccat tgcagctttg gagccgttat agccgagcgg acccactgca
     3601 agccgatgac tgccaggaaa actgtcattg tgttggtaat tgttgcatac cggcgcatcg
     3661 agcttttcgg cgagtgcgac gcactcgggg atcgcgtctc ctagcactac gcccgcgccc
     3721 gacagaatga ccggaaactt ggccgcggat aatagctttg cggcctcggt gacggcctgg
     3781 gcgccgccgg ctggacgctc gaattcgacg atggccggca tgccgatgtc gataacctgg
     3841 gtccagtaat cgcgcgggat attgatctgc gccggtgccg acagacgctt cgctttcgtt
     3901 atgacgcgat tgagaacttc cgcgacccgc gagggatcgc gtacctcttc ctggtagcag
     3961 accatgtcgc gaaacagcgc catctgttca acttcctgga agccgccttg tccgatcgtc
     4021 ttgtttgccg cttgcggcgt gaccaacagc atcggcgtgt ggttccaata ggcggttttg
     4081 atagaggtga cgaagttcgt tatgcccgga ccattctgcg cgatcgccat cgctattttt
     4141 ccggttgatc gggtatagcc gtcgcagatc agtccaccgt tggtctcatg cgcaacgtcc
     4201 cagaacgtga tcccagcctt ggggaacaga tcggaaatcg gcatgaaagc cgatccgatg
     4261 attccgaagg catgctcgat gccgtgcatt tgcaagacct tcacgaaggc ctcttccgtc
     4321 gtcatcttca tggttacatc ctcattcgat ccgagtctgg ctcacgccct gttttggaag
     4381 atttcagcga gttcggcagc ggcgtgccga agcgccggta gatgtcggcg tgcggattgc
     4441 acattcatcc gcgcctgcgg tgcctgaatg gcaagcgccg caagcatctc gccgtttttg
     4501 ccgataaccg gcacggccat gcatacgacc ccgacgagat attcttcgcg gtcgaaagaa
     4561 acctgttcct tccgtatctg ccgcaattcg gtttcgagtc gcgtactgtc tgtaatggtg
     4621 ctgtcggtga agcgtcgcag gtccatgctt tgcaataagc ggcggcgacg tggagatgcg
     4681 gcgagcgcca gaaacaattt gccgatggca ctgcagtgca gcggcacgcg cgaacctacc
     4741 gtgtagtgca gccgcagcgg ccaatgctcc gcctcaacac ggtccagata tacaacctcg
     4801 ccattgacca gggtgccgat gttgcatgtc tcattgagtg tatgcaccag ccgttggaga
     4861 acgacgtgcg gcgtatcgtg acgcatcgat gatgacaacg cgccaaaggc aagattggtg
     4921 agcttcggcc caatgatcag cctgcgccgc gccggttcgc gcgagagata gccttgcgtc
     4981 acgaaccaat cgaccagccg ataagccgtt gcctt
//
LOCUS       DATDHO010000022         2983 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_100055, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000022 DATDHO010000000
VERSION     DATDHO010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100055"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..150
                     /locus_tag="VIY07_00395"
     CDS             <1..150
                     /locus_tag="VIY07_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-demethylubiquinol
                     3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol
                     methylase"
                     /protein_id="HEY6380247.1"
                     /translation="TAIEDGGLEVIGERGVVYNPFADRWQLSSDMDVNYMLVAERPKQ
                     KGEAE"
     gene            147..491
                     /locus_tag="VIY07_00400"
     CDS             147..491
                     /locus_tag="VIY07_00400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380248.1"
                     /translation="MILELVEFNSPKGWSRRQVADEARNVVAKWRGNKELLRKHFLLE
                     LNGKTGAGVYIWPSVEAAQKAHDEDWRQSVIKRTGGAPTIRYFDLFLLIDNEKGAVTE
                     FPEAAEIRPAAA"
     gene            561..1445
                     /locus_tag="VIY07_00405"
     CDS             561..1445
                     /locus_tag="VIY07_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY6380249.1"
                     /translation="MLWAVFTLIAAAAQTARNAMQRELTAALGTVGATHVRFLFGFPF
                     ALVFLACVLTATGTALPSPPHAFWPWVLGGAFTQIAATATMLSVMGQRSFVVAYAYIK
                     TEPVHVALFGLLFLGDKISALSGLAILIATAGVIVISPMAKSGEGADLRSTVVGLVSG
                     ALFGLSAIGYRGAILSLQLPNFVVAATFTVTVGLIIQAAVLSLYLALRDPKVLHAIAR
                     AWRPSLFAGFMGAFASEFWFLAFAITTAANVRTLALVEVLFAQGVTRFVFKQPTTQRE
                     LVGIGLVVIGVGLLVWAH"
     gene            complement(1461..1955)
                     /locus_tag="VIY07_00410"
     CDS             complement(1461..1955)
                     /locus_tag="VIY07_00410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HEY6380250.1"
                     /translation="MIRYALICERGHQFESWFQDSSAFDKQVRRGLVSCPQCSSAKVQ
                     KAIMAPHLSATAKKQPAPIQPSAEAPAKVVEAPANPAPAPVAMMSPQEREFRAKLKEL
                     RDHLTKNADNVGAKFPEEARKMHYGEIEQRSIYGVASPDEAKELSDEGVEFHPLPVLP
                     DERN"
     gene            complement(1952..2827)
                     /locus_tag="VIY07_00415"
     CDS             complement(1952..2827)
                     /locus_tag="VIY07_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEY6380251.1"
                     /translation="MSTGTFKTAMIQMRSGLKPAANIDDAVRLISEAKSAGAEYVLTP
                     EMTNILAAKREHLFGAIVAEEADPSLATLRELARQLGVYIHIGSLAVSLSPERAANRS
                     FLVDRKGNIAARYDKIHMFDVDLANGESYRESRNYRPGEQAVLADLPWGRLGLTICYD
                     LRFPALYRALAEAGATMLAIPSAFTKQTGEAHWHVLVRSRAIENGCFVFAAAQGGKHE
                     NGRDTYGHSLIVDPWGRIIAEGSTDPGVVMAEIDPTEIANARARIPSLQHGRRFEIVE
                     PMAEPAHLHVVRGAE"
     gene            complement(2824..>2983)
                     /locus_tag="VIY07_00420"
     CDS             complement(2824..>2983)
                     /locus_tag="VIY07_00420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008598069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutaredoxin domain-containing protein"
                     /protein_id="HEY6380252.1"
                     /translation="ERRDEMIQRANGQMTVPQIFIGAVHVGGSEELHALERAGKLDPM
                     LAGGEASP"
BASE COUNT          554 a          882 c          891 g          656 t
ORIGIN      
        1 accgcgatag aggatggcgg gctggaggtg attggcgagc ggggcgtcgt ctacaatccg
       61 ttcgcggacc gatggcaatt gtcatcggac atggacgtca actacatgct ggtggcggag
      121 cgccccaagc aaaaaggaga agctgaatga ttctcgagct ggtcgaattc aattcgccga
      181 agggctggag ccgccgccag gtagcggatg aagcacgcaa cgtggtagcg aaatggcgcg
      241 gcaacaagga actgctgcgc aaacacttcc tgcttgaact aaacggcaaa accggcgccg
      301 gcgtctatat ctggccctca gtggaggccg cgcaaaaggc tcatgacgaa gattggcgcc
      361 agtctgtgat caagcgtact ggcggagcgc ccaccatccg atatttcgat ttattcctgc
      421 tcatagataa tgagaaaggt gcggtcaccg aatttcccga agcggccgaa atccgtcccg
      481 cggcggcgta atctttctct acaccctgag acaaaagaca cgtggcgcgg gtcaagcccg
      541 cgcatgaaca cggagaaaga atgctttggg ccgttttcac gctgatcgcc gctgccgcgc
      601 aaactgcgcg caacgcgatg cagcgagagt tgaccgcggc ccttggaacc gtcggcgcca
      661 cgcatgtccg ttttcttttc gggtttccct ttgcgctggt ttttttggcg tgtgttttga
      721 ccgcaacggg cacggccttg ccgtcgccac cgcatgcatt ctggccgtgg gttcttggcg
      781 gtgcatttac ccagatcgcc gccacggcaa ccatgctctc tgtaatgggc cagcgctcgt
      841 tcgtcgtcgc atacgcctac atcaagacag agccggtgca tgtggcgctc ttcggcctcc
      901 tttttcttgg cgacaagata tcagcgctct ccggtttggc gatcctcata gctacggcgg
      961 gcgtgattgt gatctcgccc atggcaaaat ccggcgaggg ggcagacttg cgatcaaccg
     1021 tcgtgggact ggtatccggg gcgctattcg ggctttccgc gatcgggtat cgaggcgcga
     1081 tcctgtcgct acagctgccc aattttgttg tggcggcaac ctttactgtg acggtcgggc
     1141 tgataatcca ggcagcggtt ctgtcgcttt atctggcctt acgcgacccg aaggttcttc
     1201 acgccatcgc acgtgcgtgg cgaccctccc tgtttgccgg cttcatgggt gctttcgcct
     1261 ccgaattctg gtttctcgcc tttgcgatca cgactgcggc caatgtgcgc acattggccc
     1321 ttgtcgaggt gctgttcgcg caaggagtga cgcgctttgt attcaagcag ccgaccacgc
     1381 agcgtgaact tgtcggcatc ggccttgtcg tgatcggtgt cgggctgctg gtttgggcgc
     1441 attagctcgc gaatgacgag ctagttcctc tcgtcgggca acaccggcaa cgggtggaat
     1501 tcaactccct cgtcggacag ctctttggct tcgtcgggcg aggcgacacc ataaatcgag
     1561 cgttgctcga tttcgccata gtgcatcttg cgagcttctt cggggaactt tgcgccgaca
     1621 ttgtcggcgt tttttgtgag atggtcgcgc aattccttga gtttcgcgcg aaattcccgt
     1681 tcctgcggtg acatcatggc tactggggcg ggtgccgggt ttgcgggcgc ttcaactact
     1741 ttcgcaggtg cttctgccga cggctgaatc ggcgcgggct gtttcttcgc agtcgccgac
     1801 aagtgcggcg ccatgatcgc cttttgcacc tttgcggagc tgcattgcgg gcacgacacc
     1861 agcccgcgcc tgacttgctt gtcaaacgcg gaggaatcct ggaaccagct ttcaaactga
     1921 tggccccgct cgcaaataag tgcgtaacga atcattctgc ccctcgtacg acatgcagat
     1981 gagccggttc ggccatcggc tcgacaattt caaaacgacg gccatgctgc aatgatggaa
     2041 tgcgcgcgcg cgcattggct atttccgtgg gatcgatttc ggccatgacc acccccggat
     2101 cggtgctgcc ttccgcaatg atgcgccccc aagggtcaac gatcagtgaa tggccgtaag
     2161 tgtcccgccc gttctcgtgc ttgccgccct gtgccgcagc aaagacgaag cagccgtttt
     2221 caatggctcg actacggaca aggacgtgcc aatgggcttc gccggtctgc ttggtgaatg
     2281 ccgagggaat cgccagcatc gtagcgccag cttcggccaa cgcacgatag agcgcgggaa
     2341 accgcaggtc ataacatatc gtaaggccaa gtcggcccca cggcaggtcc gcaagcacag
     2401 cctgttcgcc ggggcggtag ttgcgcgact cgcgatagct ttcgccgttc gcaagatcga
     2461 cgtcgaacat gtgaatcttg tcataacgcg ccgcaatatt gcctttccga tcgacaagga
     2521 aagaccgatt ggccgcccgc tcgggcgaaa gactgaccgc cagcgagccg atatgaatgt
     2581 agacgccaag ctggcgcgcc agttcacgca acgttgcgag agagggatcc gcctcttcgg
     2641 cgacgattgc gccgaagaga tgttcgcgtt tggccgccag gatgttcgtc atttccggag
     2701 tgagcacgta ctcggccccg gccgactttg cctcgctgat gagacgcacg gcgtcgtcga
     2761 tgttggcggc cggcttgagg ccagaccgca tctgaatcat tgcggtcttg aaggtgccag
     2821 tgctcatggc gacgcctcgc cgcctgccag catggggtca agtttgccgg cacgttccaa
     2881 cgcatgcagc tcttcgctac ccccgacgtg caccgctccg ataaaaatct gcggcaccgt
     2941 catttgccca ttcgcccgct ggatcatttc gtcgcggcgc tcc
//
LOCUS       DATDHO010000023         2328 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_199054, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000023 DATDHO010000000
VERSION     DATDHO010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199054"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..561)
                     /locus_tag="VIY07_00425"
     CDS             complement(<1..561)
                     /locus_tag="VIY07_00425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380253.1"
                     /translation="MTSNAWAMMLGIAMQALLFHAMPRFSRPDILFAVTVPDAFASGV
                     GRTLVARYRAIVWTGAAAALAVSLLIPTPPVSGRGAFLTMAVVAGNLIVRPVRVLVDE
                     PEGARMPSRMLTCASPRPFDQRQTPQASAACSIRVSTPAFGRIEQIVRKRKSRKFFVF
                     NNRRRTTPAASTTPRDFSRKIARFRPP"
     gene            complement(558..953)
                     /locus_tag="VIY07_00430"
     CDS             complement(558..953)
                     /locus_tag="VIY07_00430"
                     /inference="COORDINATES: protein motif:HMM:NF012610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY6380254.1"
                     /translation="MAAAPRVSIDLGSPTPAYRQIASDLRRHLVEQRLKPGDLLPPIR
                     QLALDLGVHFNTVALAYRLLADEGWLELKRRRGAVVMARSAPRSMDRTRVDQLLQQLG
                     HIAAELRSAGMSARQISAALQRIAQGARP"
     gene            complement(1312..1983)
                     /locus_tag="VIY07_00435"
     CDS             complement(1312..1983)
                     /locus_tag="VIY07_00435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380255.1"
                     /translation="MWPPVERDEGGGVLVLAEGAVGLKRCDVSVHVCNVGATVIVAVV
                     VLVGGCSSNSENQPQEQAAVAGADYRNAEYVIEGQRIKLADGLTEADASPASASRIVT
                     RYFGNELRTDLNDDGRQDVVFLLTQQRGRSGTFFYAVAALNAEAGYRGSDGYRLGDRI
                     EPQATVVSQDPRHKNVIVVNYADRRPDEPMTAQPSVGKSVYLKLNAETMQWGIVVPNF
                     EGESR"
BASE COUNT          464 a          717 c          702 g          445 t
ORIGIN      
        1 cggcgggcga aagcgcgcga ttttcctact gaaatcgcgt ggtgtggtgg aggcggcggg
       61 agttgttctc ctccggttgt tgaaaacaaa gaacttacgg gatttccgct tcctcacgat
      121 ttgctcgatc cgcccgaaag ccggggtaga gacacgtatt gagcacgcgg cgctggcctg
      181 tggggtctgc ctctgatcga acggccgagg cgacgcgcac gtcagcatgc gcgacggcat
      241 gcgcgcgccc tccggttcgt ccacaagcac gcgcacaggc cgaacgatca agttgccggc
      301 tacaacggcc atggtaagaa acgctcctcg tccggagacg ggcggcgtcg ggatcagcag
      361 gctgacagca agcgccgccg cggccccggt ccagacgatc gctcgatacc gcgcgacgag
      421 cgtgcggccg acgcccgatg cgaacgcgtc tggcaccgtc accgcgaaca ggatgtctgg
      481 ccggctgaag cgaggcatag cgtgaaagag caacgcctgc atcgcaattc cgagcatcat
      541 ggcccacgcg ttggacgtca tggtcgtgct ccttgcgcga tgcgctgcag cgccgccgag
      601 atctgccgtg ccgacatgcc ggcgctgcgc agttcggcgg cgatatgccc aagctgctgc
      661 aacagctgat cgacacgagt gcgatccatc gaccgcggcg cgctccgcgc cataacgacg
      721 gcgccgcgtc gccgcttcaa ctcgagccag ccttcgtcgg cgagcagtcg atacgcaagt
      781 gccacggtgt tgaagtggac cccgaggtcg agcgccagct gacggattgg cggtagcagg
      841 tcgcccggct tgagccgctg ttccaccaga tgacgacgca gatcgctggc aatctggcga
      901 taggcgggag tgggggagcc gagatcgatc gacacgcggg gtgcagcagc cattgtctaa
      961 tgtctatgta caatatacat tagcgatggc agacgcaagg cgccctgcaa aagaagaccg
     1021 agccaaacag aaatcgaacc gccggtcagg ttcccaaccg ctggattact cgcgagtagt
     1081 cggcaagggt atttctaccc gactggctcg gcatcaagag tcgcttcgcc gttactgagg
     1141 gttcaaagac gtagcgcgtt ctatgctgcg ccaaggggaa gggccacctt gcagtgcgct
     1201 cggcgcgcag aggcccgcta cccgcgtctc gcaccattgg agttcatcgt cgacgtgatc
     1261 agcggaatga cgaccaatct gatccttcgc ctggtcgtcg agctctgaag gctatcgaga
     1321 ttcgccttca aaattcggaa cgacgatacc ccactgcatg gtttcggcat tgagcttcag
     1381 gtacacgctc ttaccgacag atggttgcgc cgtcatcggc tcgtctggcc tgcggtcggc
     1441 atagttcacc acgattacgt tcttgtggcg gggatcttga ctcaccacgg tcgcttgagg
     1501 ttctatgcga tcgccgagtc gatagccgtc cgagccgcga tagcccgctt cggcattgag
     1561 agcggcaact gcgtaaaaaa acgttccgga gcgccctcgc tgctgcgtga gcaggaatac
     1621 gacatcttga cggccgtcat cgtttaggtc ggttcttagt tcgttcccga agtagcgcgt
     1681 gacgattcgt gacgctgagg cgggagaagc atcagcctcg gtcaggccgt cggcaagctt
     1741 gatgcgctgg ccttcaatca cgtactcagc gttcctgtag tcagcccctg caacggctgc
     1801 ctgctcctgc ggctgattct cggaattaga ggaacatcct ccgacgagga cgacgaccgc
     1861 gacgataacc gttgcgccga cgttacatac atggaccgac acgtcgcacc gtttcagtcc
     1921 cacagcaccc tcagcgagta ccagaacccc gccgccttca tcgcgctcga ccggcggcca
     1981 cacccagata gtctgactgc tattacgaaa cccctcctga ttgtggtggg tgtttcacct
     2041 ctctaagcgt gcaccaaatc aagcgcctcc tcggtggaca ctctaaaaca gattaaatga
     2101 agtggctggc ctcgatcgcg cccgcgatgc acgcccccca atggaagctt cggattaccc
     2161 gcgagatgtc agcaagggac tttcttagat ctcgatggcg agaatgtgcc ttgcacggct
     2221 gtccccgccg ctctcggcgc aatgggcgaa ctgtcctctg tcgctttaac acgcagcgac
     2281 atccagccgc ttcggtgcgg aagggttcgt ctcttgaaac atatgcgg
//
LOCUS       DATDHO010000024         3494 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_199058, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000024 DATDHO010000000
VERSION     DATDHO010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3494
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199058"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1111)
                     /locus_tag="VIY07_00440"
     CDS             complement(<1..1111)
                     /locus_tag="VIY07_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEY6380256.1"
                     /translation="MSQLPDFTKIDFADTASPAGTRDSESWMTPEGIAVKSVYTEQDV
                     AGLDFLNTYPGRPPYLRGPYPAMYAAQPWTIRQYAGFSTAEDSNAFYRRNLAAGQKGL
                     SIAFDLATHRGYDSDHPRVSGDVGMAGVAIDSIYDMRTLFSGIPLDQMSVSMTMNGAV
                     LPVLALYIVAAEEQGVPHQKLSGTIQNDILKEFMVRNTYIYPPGPSLRIISDIFAFTS
                     AEMPKFNSISVSGYHMQEAGATQDLELAYTLADGVEYVRAGLKAGLTVDQFAPRISFF
                     WAIGMNYFMEIAKLRAARMLWAKLMQPFNPEDSRSLSLRTHCQTSGWSLAAQDVFNNV
                     SRTMIEAMAATQGQTQSLHTNALDEALALPTDFSAR"
     gene            complement(1108..2958)
                     /locus_tag="VIY07_00445"
     CDS             complement(1108..2958)
                     /locus_tag="VIY07_00445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase subunit beta"
                     /protein_id="HEY6380257.1"
                     /translation="MPFATEFPPTSEAEWRRLVETALKGAAFDKRLVSRTYDGLRVEP
                     LYPRAAGAKPVIGRMPGSGWALIQRVDHPDPAAANAQALQDLGNGATGLVLVMTGSVS
                     ANGYGLDPSPDTLARVLKEVQLDAGITIDFDLAPATTTVLQHFALLAKKRKLSPASID
                     IRAGVNPIGGFAASGASPQPWNTVTKKFADTVGELASQGFRGRFALADGRVIHNAAGS
                     EAQELAFAIAAAVEYLRALEQGGISIDAARGMIYFRLSADADEFLTIAKFRALRKLWA
                     RIEQTSGLNPAPAYLTAETAWRTMTRRDPYVNMLRTTVAIAAAGLGGADSITALPHTA
                     ALGLPDSFARRIAQNTQLILLEESNLAKVNDPAAGSGAIEDLTGKLCAAAWTFFQEIE
                     STGGAWAALERGLIQKKVAAVRSEREQAVAKRRDALTGTSDYPDLNEAPATALDVAPI
                     IPPKEAGPAITTEALPRIRLAEPFERLRDASDRMLETTGSRPKVFLANLGKASDFTAR
                     TTYARNFYAAGGIAADSNDGFKDQAEMIAAFKASGARLACLCSSDKVYASDAAQAAKA
                     LTAAGAVVQLAGRPGENEAAWRQAGVKAFIYTGCDTLATLQATHDILGVK"
     gene            complement(3047..>3494)
                     /gene="folK"
                     /locus_tag="VIY07_00450"
     CDS             complement(3047..>3494)
                     /gene="folK"
                     /locus_tag="VIY07_00450"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEY6380258.1"
                     /translation="GNSRAILDRAIALLCDGKDVRLMARSSDYCTPPWGFKYQPHFVN
                     LAIAVETTLDPRELLARAQQVELRLGRDRAHEKRNGPRTADIDIIAYDDVTMNEPNLT
                     LPHPRLFERAFVLVPLAEIAGDRVIAGRRLAEAAKAVDAGGIHRMP"
BASE COUNT          699 a         1025 c         1055 g          715 t
ORIGIN      
        1 tgcgggcgga gaaatccgtc ggcaaggcaa gggcctcgtc gagcgcgttg gtatgcagcg
       61 actgtgtctg accctgggtc gccgccatcg cctcgatcat ggtgcgggaa acgttgttga
      121 aaacgtcctg ggcagccaga gaccagcccg aagtctggca gtgagtgcgg agggacaggg
      181 aacgcgaatc ttccggattg aaaggctgca tcagctttgc ccacagcatg cgggccgcgc
      241 gcagcttggc gatctccatg aaatagttca tgccgatcgc ccaaaaaaat gaaatgcgcg
      301 gtgcaaactg atctacggtc agcccggcct tcaatccggc ccgcacatat tccacgccat
      361 ccgcaagcgt gtaggcgagc tcgagatcct gcgtcgcgcc ggcttcctgc atgtgatagc
      421 cggacaccga aatcgaattg aacttgggca tttctgccga cgtaaaagca aagatgtctg
      481 aaatgatgcg cagacttggt ccgggtggat agatataggt gttgcgcacc atgaattcct
      541 tgagaatgtc gttttggatc gtgcccgaga gcttctggtg cggaacgccc tgttcctctg
      601 cagcaacaat gtaaagcgcg agcaccggca gcactgcacc gttcatggtc atcgacacgc
      661 tcatctggtc gagcgggatg ccagaaaaca gcgtgcgcat gtcgtaaatc gaatcaattg
      721 cgacacccgc catgccaacg tcgccggata cacgcggatg atcgctgtcg taacctcggt
      781 gcgtggcaag atcgaaggcg atcgacagac ctttctgtcc tgccgcgaga ttgcgccggt
      841 agaatgcgtt cgaatcttct gctgtcgaaa agccggcata ttgccggatg gtccagggct
      901 gagctgcgta catcgcaggg taggggccgc gcagatacgg tggcctgccc ggataagtat
      961 tcagaaaatc caatcccgcg acgtcttgct cggtgtaaac cgactttacg gcaatgcctt
     1021 ccggggtcat ccaggattca gagtctcgcg tgccggcagg cgaagctgtg tcggcgaaat
     1081 cgatcttcgt gaaatcgggc agctgactca tttgacgccc agaatatcat gcgtggcctg
     1141 cagggtcgca agcgtgtcgc agcccgtata aatgaaggct ttaacgcccg cctgtcgcca
     1201 tgctgcctcg ttctccccgg ggcggccggc aagctgaacg accgcgccgg cggccgttag
     1261 cgccttggcc gcctgcgctg catcgctggc gtagaccttg tccgaggagc acaggcaggc
     1321 aagccttgcg ccggaggctt tgaaagcggc gatcatctct gcctggtcct taaaaccgtc
     1381 attgctgtcg gcggcaatgc caccggcggc gtagaaattc ctggcgtacg ttgtccgcgc
     1441 ggtgaagtca gaggcttttc ctagattggc aagaaacacc tttggacggc tgccggttgt
     1501 ttccaacatt cggtcggaag cgtcgcgcaa gcgttcgaac ggctctgcga gacgaatgcg
     1561 cggcaaggct tccgtggtaa tcgccgggcc ggcctctttt ggtggtatta tcggagccac
     1621 atcgagtgca gttgccggag cttcattcag atcaggatag tcgctcgtgc ctgtcagtgc
     1681 gtctctgcgt ttcgccaccg cctgctcgcg ttccgaacgc acggcagcga ctttcttctg
     1741 aatcaatccg cgttcgagcg ccgcccatgc tccgccagtg gactcgattt cctgaaaaaa
     1801 agtccaggct gcagcacaca gcttgcctgt gagatcttct atggcccccg atcccgctgc
     1861 cggatcgttc actttcgcga gattcgattc ctcgagcaaa atgagttgcg tgttttgcgc
     1921 aatccgacga gcgaaactgt caggcaatcc aagtgcagca gtgtgcggca aggccgtaat
     1981 gctgtcggcg ccaccaagtc ctgcagcagc tatcgcaact gtcgtgcgca acatgttcac
     2041 gtagggatcg cgccgggtca tcgtccgcca ggcggtctcc gccgtcagat aggcgggtgc
     2101 tggattgagt ccggatgtct gctcaatgcg ggcccatagc tttcgcaacg cgcggaattt
     2161 cgcaatcgtc agaaattcgt cggcatcggc agacaggcgg aaataaatca ttccacgggc
     2221 ggcatcgatt gaaatgcctc cttgctcgag cgcgcgcaaa tattcgacgg cggcagcgat
     2281 cgcaaaagcg agttcctggg cttcggagcc tgcggcattg tgaatgacac gcccgtcggc
     2341 aagcgcgaac cggccacgaa agccttgcga tgccagttcg ccaacagtgt cggcgaactt
     2401 tttggttacc gtattccacg gctgtggact cgcgcccgaa gcagcaaagc cgccaatcgg
     2461 attgacgccg gcccggatgt cgatggatgc cggggaaagc ttgcgctttt tcgccagcaa
     2521 agcgaaatgc tgcaagactg tggtggtcgc cggagccaaa tcgaagtcaa tcgtaatgcc
     2581 ggcgtcgagt tgtacctctt tgaggacacg cgccaatgtg tccggagagg gatcgagacc
     2641 atagccattg gcgctgacag aaccggtcat gaccagcacc agcccggtgg caccgtttcc
     2701 caggtcctgc aatgcttgcg cgttcgccgc cgccgggtcc ggatggtcga cacgttgtat
     2761 cagcgcccac cccgaccctg gcatgcgtcc gatcacgggc tttgctccag ccgcccgtgg
     2821 atagagtggc tcgaccctca ggccgtcgta ggtccggctt acgagccgct tgtcgaatgc
     2881 ggcacctttg agcgcagttt cgaccagcct ccgccattcc gcttccgatg tcggcgggaa
     2941 ctcggttgcg aagggcattt cgtcagtcat ccgggcaaaa tgacacagtc ggcacgatcg
     3001 agccattgcg tcgaagcaac ttgcatattc ggtccggccg cgtcagttag ggcatccggt
     3061 ggattccacc ggcatcgacc gccttggcag cctcagccaa ccgacgtcct gcgatgaccc
     3121 ggtcgcctgc aatttcggcc aggggcacca gcacaaaagc ccgctcaaac agacgcgggt
     3181 gcggcagcgt cagatttggt tcgttcatcg tcacgtcgtc atacgcgatg atgtcgatat
     3241 cggcagtgcg cggaccattc cgcttttcgt gtgcgcggtc tcggcctagc cgaagttcga
     3301 cctgttgagc gcgcgcgagt aattcgcggg gatcaagcgt cgtttcaacg gcgatggcaa
     3361 gattcacgaa atggggctga tacttgaagc cccatggagg tgtacagtag tcggacgacc
     3421 gcgccatcag gcgaacgtcc ttgccgtcgc agagcagggc gatggcgcga tcaagtatcg
     3481 cccggctgtt tccg
//
LOCUS       DATDHO010000025         2927 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_347648, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000025 DATDHO010000000
VERSION     DATDHO010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2927
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347648"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..288
                     /locus_tag="VIY07_00455"
     CDS             <1..288
                     /locus_tag="VIY07_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016293339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6380259.1"
                     /translation="PNELSGGQRQRVAIARALVNNPSIILADEPTGNLDSKTSEEIMQ
                     LLDVLHQRGNTIIVVTHEHDIAAHAHRVISILDGQISKDESTGRRPRGLEA"
     gene            complement(669..1997)
                     /locus_tag="VIY07_00460"
     CDS             complement(669..1997)
                     /locus_tag="VIY07_00460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380260.1"
                     /translation="MELKLPKLDKRLKKRYQKLVLEHLNTNDDIAAGIRALPGKGKAF
                     TSTQGAWRFYANPRVSLSKLGEPLIEEARGLVTSECSAYALVVHDWSNLSYQTQAQRK
                     TDLIELGHQSHGYELQNSLLVSDRTGMPLTSLDFKLTAADGVYTMRSDKPQPRQAQLD
                     EISETAVALCAAALGLPLVHIIDQEGNSVWHWRLWQSREDFFLARVGDLRKAHWQGRR
                     LRLREIATELTWRPDKVVEVTADLQAQAFVAETEVVFADPAYRRLPDGKRQVIPGEPL
                     SVRLVIVQLRLPDERVCAEWYLVTNLPPEVPAAVIAEWYYWRWTIESATKLFKSAGLH
                     LEQWQQEGALATAKRLFVAAMACVVVWQVQRGDKEQMASFRQLLLRLSGRQIRPGQAP
                     ASALLAGLWTFLSVLDALQTYDLKELLQLASLLPVGDMLERIKLRQGFSP"
     gene            complement(2133..2333)
                     /locus_tag="VIY07_00465"
     CDS             complement(2133..2333)
                     /locus_tag="VIY07_00465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380261.1"
                     /translation="MQSKLRDFFEQSDPLKPGAWDPEILCLTERLILDGKSVDNTTNE
                     EISRALFELMSLTFIEWQRRCG"
     gene            complement(2544..>2927)
                     /locus_tag="VIY07_00470"
     CDS             complement(2544..>2927)
                     /locus_tag="VIY07_00470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380262.1"
                     /translation="EPAQAVGILTALSDLRVWLGLKNSDDQGTRFDLRAEVYKNGTLV
                     AAGETRCIQGVTRNPNRAKEVTVSFAPFSPVSFNGTSDTLSLKILTRIGTGGAGGCCG
                     GHRNATGLRLYFDASNRPSGFGATF"
BASE COUNT          581 a          899 c          844 g          603 t
ORIGIN      
        1 ccgaacgaat tgtccggcgg ccagcgccag cgcgtggcca tcgcccgagc gctggtcaac
       61 aacccttcga tcatccttgc cgacgagccg accggcaacc tcgattcgaa gacctcggaa
      121 gagatcatgc agttgctcga cgtgctgcat caacgcggca atacaatcat cgtcgtaacg
      181 cacgaacatg acattgcggc gcacgctcac cgcgtaatct cgatcctcga cggacagatc
      241 tcgaaggacg aatcaaccgg caggcgcccc agaggcctcg aagcctgagc gctggcaatc
      301 agtgatacgt tgagagttgc gggagtgatg cggtacagag agcgtatcgg tatcaggctc
      361 agctctggat acgcacgtga tcggcaaagt ctcatatcga aagatgctct tcgtcacgga
      421 gagacgccgg atatcagcca catcgcaatg cagaaggaca atccacatcg gctgatgctc
      481 ttgccggata ttagtcacgt cgcgctgccg aacggcaatc cgcatcggct tacgctcttc
      541 gtcccggata gacgccggat atcagccacc tcgcgctgcc gaacgacaat ccacatcggc
      601 tgatgctctt cgtcccggag ggacgctgga tattagccgg tggtagaacc ctaaggtatc
      661 tacacaactc agggactgaa accctgccgc agcttgattc gctcgagcat gtctccgaca
      721 ggcaacagcg aagccaactg taaaagttct ttgagatcgt aagtctgcaa cgcatcgaga
      781 accgacaaga acgtccagag gccagccaag agcgccgatg ccggcgcttg gccgggcctg
      841 atttgtcgcc cactcagacg aagcagcagt tgtctgaagc tcgccatttg ctctttgtcg
      901 ccgcgttgga cttgccagac cacgacacag gccatggccg cgacaaatag acgtttggcc
      961 gtcgctagcg cgccttcttg ctgccactgt tcgaggtgta ggccggcgct cttgaaaagc
     1021 ttggtggccg attcaatcgt ccaccgccag tagtaccact cggcgatcac agccgccggg
     1081 acttctggcg gcagattggt taccagatac cattcggcgc agacccgctc atccggcagc
     1141 cgcagttgga cgatgaccaa acgtacagac aaaggctcac ctgggatgac ttggcgcttg
     1201 ccgtcgggca agcggcggta agccggatcg gcgaagacga cttccgtttc cgccacgaag
     1261 gcttgcgctt gcaagtcggc cgtgacttcg acgactttgt ccgggcgcca ggtcagttcc
     1321 gtggcaatct ctcgcagtcg caatcggcgc ccttgccaat gcgccttgcg cagatcgccg
     1381 actcgggcga ggaagaagtc ctcgcgtgat tgccagaggc gccaatgcca aacgctgttg
     1441 ccctcctggt cgatgatgtg gaccagtggc aggccgagcg ccgctgcgca gagggcgacc
     1501 gccgtctcac tgatctcatc gagctgcgcc tgacgcggct gcggcttgtc agaccgcatc
     1561 gtgtagacac cgtcggcggc agtcagtttg aagtcgagcg aagtcagtgg catccccgtc
     1621 cggtcgctca cgagcagaga gttctgtagc tcgtagccat ggctctgatg gcccagctcg
     1681 atcagatccg tcttccgctg cgcctgcgtt tggtaagaca gattgctcca gtcgtgaacg
     1741 acgagcgcat aggcgctgca ctcgctggtg actaagccgc gagcctcttc gatgagcggc
     1801 tcgccgagtt tgctaagact gacccgcggg ttggcgtaga agcgccaggc gccttgagtg
     1861 ctggtgaacg ctttgccctt accgggcaac gcgcggattc cagcggctat gtcatcatta
     1921 gtgttcagat gttccaaaac gagcttctga tagcgctttt tcaggcgctt gtctagtttt
     1981 ggtaatttca gttccattcg cggattatta ctccgcgacg gagatgtgta gataccttag
     2041 ggttccacca ccggctaatt tccactgtgc ctccggcaca aagatttgtg tagataccaa
     2101 tgggacaagc ccgtggcatc ttcaaatagt catcagccgc atcgtcgctg ccattcgatg
     2161 aaagtcaggc tcatcaactc gaacaatgcc cggctgatct cttcattcgt cgtattgtct
     2221 acgctctttc cgtcgaggat gagccgctcg gtcaggcaga ggatttcagg gtcccaggcg
     2281 ccaggcttga ggggatcgga ctgctcgaag aagtcgcgaa gtttggattg caactcttcg
     2341 agcagctcgt ctggcagcgc gcgcagaaca tcctctgcgg acgctccgcc cgtaatcccc
     2401 agttcccgtc ctgcgatgag gtagaacccc gccggcggcg ccctggcgag gttctcaagt
     2461 tcgaggtcag tgatcggctc gccggcgcca ggtcgccgat gcgggttttg acttgctctc
     2521 ggtcttcccg cgtcaattcc atgtcagaac gtcgctccga accccgaagg ccgattgctc
     2581 gcgtcgaaat acaaccgcag cccggtcgcg tttctgtggc ctccgcagca gccgccagcg
     2641 ccaccggtcc cgatccgcgt caggattttc aacgacagcg tgtcgctggt tccgttgaag
     2701 ctaacgggcg agaagggagc gaacgagact gtgacctctt tggcccggtt gggattcctg
     2761 gtcacgccct ggatgcagcg ggtctcgcct gccgccacca gcgttccgtt tttgtagacc
     2821 tcggccctga ggtcgaagcg cgtcccctga tcgtcactgt tcttcaatcc cagccacacg
     2881 cgcaggtcgc tcaaggcggt caatattccg accgcctgcg ccggctc
//
LOCUS       DATDHO010000026         1523 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_446490, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000026 DATDHO010000000
VERSION     DATDHO010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446490"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..246)
                     /locus_tag="VIY07_00475"
     CDS             complement(<1..246)
                     /locus_tag="VIY07_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HEY6380263.1"
                     /translation="MASNIKIKPSPKESPTEPFKRAVTGCLRALARKPELEVAFAAER
                     PGLMGGKVRLPEPPRKLGKTEAAVVRGHADSLALRLAC"
     gene            complement(312..1298)
                     /gene="cobS"
                     /locus_tag="VIY07_00480"
     CDS             complement(312..1298)
                     /gene="cobS"
                     /locus_tag="VIY07_00480"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051116 - cobaltochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobS"
                     /protein_id="HEY6380264.1"
                     /translation="MTAAMQEVAGLPDMKVSVRQVFGIDSDLEVPAYSQADEHVPDID
                     SDYRFDRPTTLAILAGFAKNRRVIVTGYHGTGKSTHIEQVAARLNWPCVRVNLDSHIS
                     RIDLIGKDAIVIKEGQQVTEFREGILPWALQNNVALCFDEYDAGRPDVMFVIQRVLEA
                     SGRLTLLDQSKVIKPHPAFRLFATANTVGLGDTSGLYHGTQQINQGQMDRWSIVTTLN
                     YLPHDNEVEIVLAKAKHYRNEQGRDTVNKMVRVADLTRNAFMNGDISTVMSPRTVITW
                     AENAEIFNDIGFAFRLTFLNKCDELERPIVAEFYQRCFGVELPESSVNVALT"
BASE COUNT          312 a          456 c          440 g          315 t
ORIGIN      
        1 acaggcaaga cgcagggcaa gtgagtccgc atggccccga actaccgcag cctcggtttt
       61 tccgagcttg cgcggcggct ccggcaaacg aactttcccg cccatcaacc ccggacgctc
      121 ggcagcgaac gcgacctcca attccggttt gcgcgccaag gcgcgcaggc aaccggtgac
      181 cgcgcgcttg aaaggttcgg tcggcgattc tttaggcgac ggcttgattt tgatgttgga
      241 ggccatggtc gaagatgttg atgctcgtca ttcagaatcc gacgctgcgc gtcgtccgga
      301 atggccagtt attacgtcaa tgcgacattc accgatgact ccggcagttc aacgccgaag
      361 cagcgctgat agaactcggc gacgatcggt cgctcaagct cgtcacattt gttgagaaaa
      421 gtcagccgga aggcaaaacc gatgtcgttg aagatctcgg cattctccgc ccaggtaatg
      481 acggtgcgtg gactcatgac ggtcgagatg tcgccgttca tgaatgcatt gcgcgtgaga
      541 tccgcgacac gcaccatctt gttcacggta tcgcggccct gctcattgcg ataatgcttg
      601 gccttggcca aaacgatttc cacttcatta tcgtgcggca gataattcag cgtggtgacg
      661 atcgaccaac ggtccatctg gccctggttg atctgctgcg tgccgtgata gagccccgac
      721 gtatcgccga gacccaccgt gttggccgtg gcgaacagac gaaacgcggg atgcggcttt
      781 atcaccttgc tctggtcgag cagcgtgagc cgtccggagg cttccagcac gcgctgaatg
      841 acgaacatca catccggcct accggcatcg tattcgtcga agcagagcgc gacgttgttt
      901 tgcaacgccc atggcaggat gccttcgcgg aactcggtga cctgctggcc ctccttgatc
      961 acgatcgcgt ccttgccgat gagatcgatg cggctgatat ggctgtcgag attgacacgc
     1021 acgcacggcc aattgagccg cgccgccacc tgctcgatat gcgtcgattt gccggtacca
     1081 tgataaccgg tcacgatcac acggcggttc ttggcgaagc cggcgagaat agcgagcgta
     1141 gtcgggcgat cgaaccgata gtcggaatca atatccggga cgtgctcatc ggcctgcgaa
     1201 taggccggca cttccaaatc gctgtctatt ccgaaaacct gccggaccga caccttcata
     1261 tcgggcaggc cggcaacttc ctgcattgcg gctgtcattg atcctccgtg gctccggaac
     1321 tccgaagccc gtgatgcggt ccgattcgta cggtccggct gatggcggca acttaccaga
     1381 cgccgcggcg tcgaaaaacc cgccgcaacc caatgccacc accaattatt tcaataagat
     1441 aggggtcgcg agccttgtac gaaaggcggg gctgggttgc tttggcgagg cctccgggcc
     1501 ctcagccaaa tcctactgat ttc
//
LOCUS       DATDHO010000027         2871 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_1175, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000027 DATDHO010000000
VERSION     DATDHO010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2871)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2871)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1175"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1242)
                     /locus_tag="VIY07_00485"
     CDS             complement(<1..1242)
                     /locus_tag="VIY07_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6380265.1"
                     /translation="MRSDRIVPLIIAVALFMENMDSTVIATSLPAIAADIGTNPLALK
                     LAVTSYLLSLAIFIPASGWTADRFGARTVFRAAIAVFVLGSIGCALSGSLTDFVIARI
                     VQGMGGAMMTPVGRMVVVRTISKRDLVGAMAWVTTPALIGPVLGPPVGGFITTYASWH
                     WIFIINVPIGLLGILFATRYIPDVRAEKHERFDVVGMILAGLGIGGMAFGLSVLGLNF
                     LPLYVVVALVFGGGCFLAAYLAHARRTDNPALDLSLFRLPTFFASVVGGFIFRLGLGA
                     LPFLLPLMLQIGFGMTPFQSGMITFATALGAMGMKWAVAFILRRFGFKNILVVNSLIS
                     SAFLAVYAGFTAATPVALMLFLLFVGGFFRSLQFTSINTIAYAEVEPERIGSATALVS
                     VAQQLAVSSGVAIGAMVVELTV"
     gene            1501..>2871
                     /gene="guaB"
                     /locus_tag="VIY07_00490"
     CDS             1501..>2871
                     /gene="guaB"
                     /locus_tag="VIY07_00490"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEY6380266.1"
                     /translation="MAVKNNASPREALTFDDVLIKPGLSEVLPADVDIRSRLTPSIPV
                     NIPIIASAMDTVTEAQMAIAMAQAGGIGVLHRNMEPDEQAAQVRQVKKFESGMVVNPL
                     TIEPTATLQRALDLMKDNRISGIPVVESGSNSLPGKLVGILTNRDVRFATDPRQKVSE
                     LMTKKLITVREGVSQDEAKRLLHQHRIEKLLVVDGQYRCVGLITVKDIEKAVANPNAC
                     KDEQGRLRVAAATTVGDKGFARTEALIAAGVDLVVVDTAHGHSKYVLDAVARIKRQSN
                     KVQVVAGNVATAEGARALIDCGADAIKVGIGPGSICTTRVVAGVGVPQLTAIMDCVDV
                     AKASGTPVIADGGIKYSGDLAKAISAGADCAMVGSLLAGTDETPGEVFLYQGRSYKTY
                     RGMGSVGAMSRGSADRYFQQDIKDTLKLVPEGVEGQVPYKGAAATVLHQLTGGLRAAM
                     GYVGAKN"
BASE COUNT          644 a          863 c          913 g          451 t
ORIGIN      
        1 gactgtcagc tcgaccacca tcgctcctat cgctacgccc gacgagacag ccaattgctg
       61 ggcgacgctg acgagggctg ttgcggagcc aatgcgctcg ggctcgacct ctgcataggc
      121 gatggtgttg atgctggtga actgcagtga acggaaaaat ccgccaacga acaaaaggaa
      181 cagcatcagc gcaacgggcg tggccgctgt gaatccggcg tagacggcaa gaaaggccga
      241 gctgatcagc gaattgacta ccagaatatt cttgaatccg aagcggcgca ggatgaacgc
      301 tacggcccat ttcattccca tggcgccaag cgcggtcgca aacgtgatca tgccggactg
      361 gaacggcgtc atgccgaagc cgatctgcag catcagcggc agcaggaagg ggagcgcgcc
      421 aagaccaagg cggaagatga agccgccgac gacgctcgcg aaaaacgtcg gcagcctgaa
      481 caacgagaga tcaagcgcag gattgtcggt acgtcgcgca tgcgcaaggt aggctgccag
      541 aaagcagccg ccgccaaaca caagggccac cacgacatac aaggggagaa aattcagtcc
      601 cagcaccgag aggccgaaag ccatgccgcc aatgccaaga ccggcgagga tcatgccgac
      661 aacgtcgaag cgctcatgct tttcggcccg cacatccggg atgtagcgcg tggcaaataa
      721 tatcccgagc aagccgatcg ggacgttgat gatgaagatc caatgccagc ttgcataagt
      781 ggtgatgaag ccgccgaccg gcgggcctag caccgggccg atcaacgcag gcgtagtgac
      841 ccaggccatc gcgccgacga gatcacgctt gcttatcgtg cgcaccacca ccatgcggcc
      901 gacgggtgtc atcatcgcgc cacccatgcc ttgcacgatc cgggcgatga cgaagtcggt
      961 gagcgagccc gagagcgcgc atccgatcga gccgagcaca aagaccgcga tagccgcccg
     1021 gaacacggtg cgcgcgccga agcgatcggc agtccagccg ctggccggta tgaatattgc
     1081 gagcgacaag agatacgagg tcaccgcgag cttgagcgcg agcggattgg tcccgatgtc
     1141 ggccgcaatc gccggcaacg aggtcgcgat caccgtcgaa tccatgtttt ccatgaaaag
     1201 agcgaccgcg atgatcagcg ggacgatgcg gtcactgcgc atgaaggttc cggcggagcc
     1261 tgggcgtctt caaaacaagc gtcttggagc gcatagcaca gccccaagat aagcactctc
     1321 ccccgtttac gagatcataa cagccatctg cgaatgccct aggaatcggc atcatcccat
     1381 gctatcgacc cacgccaacc caaaagcggg ccgtgacgca aggcgaggac cccctcgcaa
     1441 cgggcaattt taaccccttg ccggccggtc ggtgcctttt cgggcgagac ggagttggcg
     1501 atggcggtca agaacaacgc aagtcctcgc gaagcgctta ccttcgacga cgtgctgatc
     1561 aagccaggcc tgtcggaggt gctcccggcg gatgtcgata ttcgttcccg cctcacgcct
     1621 tcgatcccgg tcaatattcc cattatcgct tcggcgatgg acaccgtgac cgaagcgcaa
     1681 atggcgatcg ccatggcgca ggcaggcggc atcggggtgc ttcaccgcaa catggagccg
     1741 gacgaacagg cggcgcaggt ccggcaggtg aaaaaattcg aatccggcat ggtcgtgaat
     1801 ccgttgacga tcgagcccac cgcgacgctt cagcgggctc tcgatctgat gaaagacaac
     1861 cggatttccg gaatcccggt ggtcgagagc ggcagcaatt cgctacccgg caagctggtc
     1921 ggcatcctga cgaaccgcga tgtgcgcttc gccacggatc cgcgccagaa ggtgtccgag
     1981 ctgatgacca agaagctgat cacggtgcgc gagggcgtga gccaggacga agccaagcgc
     2041 ctgctgcatc agcaccgcat cgagaagctt ctggtggtcg acggccagta ccgctgcgtc
     2101 gggctgatca cggtgaagga tatcgaaaaa gcggtggcca acccgaacgc ctgcaaggac
     2161 gagcagggtc gcttgagggt ggcggcagcc acgacagtcg gcgacaaggg ctttgcccga
     2221 accgaggcat tgatcgcggc aggggtcgat ctcgtggtgg tcgacaccgc gcacggtcat
     2281 tccaagtatg tgctggacgc cgtggcccgc atcaagcgcc aatcgaacaa agtgcaggtg
     2341 gtggccggca acgtggccac ggccgagggc gccagggcgc tgatcgattg cggtgccgac
     2401 gcgatcaaag tcggcatcgg ccccggctcg atctgcacaa cgcgggtcgt ggccggtgtc
     2461 ggtgtgccgc aattgacggc gatcatggac tgcgtggacg tggcaaaagc aagcggcacg
     2521 ccggtgatcg ccgacggcgg catcaagtat tccggcgatc tcgctaaggc aatttccgcc
     2581 ggcgcggact gcgcgatggt cggttcgctg ctcgccggta ccgatgaaac gcctggagag
     2641 gtctttcttt atcaggggcg ctcctacaag acctatcgcg gcatgggctc tgtcggcgcg
     2701 atgtcccgcg gatcggccga ccgttacttt cagcaggaca tcaaggatac gctcaagctc
     2761 gtgcctgaag gagtcgaagg ccaggttccc tacaaaggcg cggcggcgac cgtgctgcat
     2821 cagctcaccg gcggcctgcg cgccgccatg ggttatgtcg gagcaaaaaa t
//
LOCUS       DATDHO010000028         3240 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_1223, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000028 DATDHO010000000
VERSION     DATDHO010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1223"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..675)
                     /locus_tag="VIY07_00495"
     CDS             complement(<1..675)
                     /locus_tag="VIY07_00495"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY6380267.1"
                     /translation="MARKLVDISVPLENDVAADPPGYGPKIEYLDHQATAADVLKFFP
                     GLKKEDLPDGEGWGIEWVRLSTHCTTHLDAPWHFASTMDRGKRAITIDEVPLEWCFQP
                     AVKLDFRHLADGYVATAKDVETELKRVGHTLSPLEIVLVNTSAGMAYGQPDYVAKGCG
                     MGREATLYLLERGVRVTGIDGWSWGAPFIYTMKKYAETRDASLIWEGHRAGREIGYCH
                     IEKLHNL"
     gene            820..1110
                     /locus_tag="VIY07_00500"
     CDS             820..1110
                     /locus_tag="VIY07_00500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009465713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEY6380268.1"
                     /translation="MPAYWVARSKINDPVEYKKYTDLVPAIIEKFGGKVLARGGRFQI
                     MEGPDKFHRFIVIEFPTFEQGVACFTSPEYGEAAAFRRSGAGEVETIMVDGI"
     gene            1200..2486
                     /locus_tag="VIY07_00505"
     CDS             1200..2486
                     /locus_tag="VIY07_00505"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY6380269.1"
                     /translation="MLRYLKTKAFAWTAGLAVTLAAGAMFIVSGAQAQDKEPVKIGFS
                     MSLTGPLSANGKQALLGMQIWEEEINAKGGLLGRPVKLIYYDDKSTAAEAPGIYTKLL
                     DVDKVDLILGPYATVPAAAAMTVAVQRKKVFQILFGLDVNSEFKYDRFFAMIPTGPNT
                     KPSFTEGFFDTAAQQNPKPQTAALAFADAEFAQNACEGARVNAKKHNIKIVYDKAYPP
                     ATTDFTPIVRAVQAANPDLFVICSYPLDSVGMVKAVNEIGFKPKMIGGAMVGLQATVF
                     KNQLGPLLNGWVNYETWVPSDKMNLASTQEFLKKYQARAAAAGVDPLGYYLGGWGYAY
                     AQLFGDAINGAKSLDDGKIAEYMRKTTFKTIMGDIKYGKNGEWEKGRMLQVQYHGIKQ
                     GASLDVWRGMSYQTVLTPGDLKTGDVIYPFEKAKAQ"
     gene            complement(2551..>3240)
                     /locus_tag="VIY07_00510"
     CDS             complement(2551..>3240)
                     /locus_tag="VIY07_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380270.1"
                     /translation="GSVRVLEDISIDVKAGETVVMLGTNGNGKSTLMKCIMGIVRPHV
                     GTIMASIDGSEHDLTVLTTEQIVDLGIALVPEGRRLFPKLTVEENLALGAFRSTARAQ
                     INQNLDACYETFPRLAERRSQLAGSMSGGEQQMLALGRALMLAPKILLVDEPSVGLAP
                     ILVARTIDKIKELKERLNLTVLMAEQNFVQALRIADRGYVIVHGKIEFEGGSADELNN
                     NDLIRKFYLGM"
BASE COUNT          656 a          971 c          966 g          647 t
ORIGIN      
        1 gagattgtgc agcttttcga tatggcaata gccgatttcg cgtccggcgc gatgaccctc
       61 ccagatcagt gacgcatcgc gtgtctcggc atactttttc atcgtgtaga tgaacggcgc
      121 gccccagctc cagccgtcaa tgccggtcac ccgcacaccg cgctcgagca gatagagcgt
      181 cgcctcacgt cccatgccgc aacctttggc gacgtaatcg ggctgcccgt atgccattcc
      241 cgcgctggtg ttcacgagca caatctcgag cggcgagagc gtatggccga cgcgcttgag
      301 ttcggtctcg acatctttcg cggttgccac atagccgtcc gcaaggtgcc ggaagtcgag
      361 tttcaccgcg ggttggaagc accactcgag cggcacctca tcgatcgtga tggcccgctt
      421 cccgcgatcc atggtcgagg cgaaatgcca tggcgcatcg agatgagtcg tgcaatgggt
      481 cgacaaccgg acccattcga tcccccagcc ttcgccgtcc ggcaagtctt cctttttcaa
      541 accaggaaaa aatttcagaa cgtcggcggc tgtggcctga tggtcgagat actcgatctt
      601 cggtccatag ccgggaggat cggccgcgac atcgttttca agcggaaccg aaatatcgac
      661 tagcttgcgt gccatgtttg ttttcctccg tcagcagcat tcattcaggt ccggcttcgc
      721 cagcacaagc cttgtgccgg gcatgcacct ctttactgtc tcatcattga agacgtgggt
      781 ggccggagca agtccagcca tggcgataag gagaagccga tgcctgctta ttgggtggcg
      841 cgttcaaaaa ttaacgatcc cgtcgagtac aagaagtaca ccgaccttgt gcctgctatt
      901 atcgaaaagt ttggcggcaa agtactggct cggggcggac gttttcagat catggaaggt
      961 ccggacaaat tccatcggtt catcgtgatt gaatttccga cattcgagca gggcgtcgcc
     1021 tgtttcacat cgccggaata cggcgaggct gctgcattcc gacgcagcgg cgccggtgag
     1081 gtcgaaacca tcatggtcga cgggatttag cccacctttt cggattgcgt ccctctagcg
     1141 catttcggca aaatggcgca taagatgaca aaaaataacg cctaattggg aggacaaata
     1201 tgcttcgata tctcaagacc aaagcattcg cgtggaccgc ggggctggct gttactctcg
     1261 cggcgggcgc aatgtttatt gtttccggcg ctcaagcgca ggacaaggag ccggtcaaga
     1321 tcggtttctc gatgtcgctc actggcccgt tgtctgctaa cggcaagcaa gccttgctcg
     1381 gtatgcagat ctgggaagaa gagatcaatg cgaagggcgg tctgctcggc cgtccggtca
     1441 agctgatcta ctacgatgac aagagcacgg ccgcggaagc gccgggcatc tacaccaagc
     1501 tgctggacgt cgacaaagtc gatctcatcc tcggccccta cgccacggtt cctgccgcgg
     1561 cggcgatgac ggtcgcggtg cagcgcaaga aggtgttcca gatcctgttc ggcctcgacg
     1621 tgaactcgga gttcaaatac gaccggttct tcgcgatgat tccgaccggc ccgaacacca
     1681 agccgtcctt caccgaaggc ttcttcgaca ccgcggcgca gcaaaatccg aagccgcaaa
     1741 ccgcggcgct cgcgttcgct gacgccgaat tcgcgcaaaa cgcctgcgaa ggcgcgcgcg
     1801 tcaacgccaa gaagcacaac atcaagatcg tctatgacaa ggcctatccg ccggcgacga
     1861 ccgacttcac gccgatcgtc cgcgcggtgc aggcggcgaa tcccgacctg ttcgtgatct
     1921 gctcttaccc gctcgactcc gtcggcatgg tgaaggcggt caacgaaatc ggcttcaagc
     1981 cgaagatgat cggcggcgcg atggtcggct tgcaggccac cgtgttcaag aaccagcttg
     2041 gcccgttgct gaacggctgg gtcaactacg aaacgtgggt gccgtccgac aagatgaacc
     2101 tggcatcgac gcaggagttc ctgaagaagt atcaggcgcg cgctgcggcg gccggcgttg
     2161 atccgctcgg ctactatctc ggcggctggg gctatgccta tgcccagctg ttcggcgatg
     2221 cgatcaacgg ggcgaagagc ctcgatgacg gcaagatcgc cgaatacatg cgcaagacca
     2281 cgttcaagac catcatgggc gacatcaagt acggcaagaa cggcgagtgg gagaagggac
     2341 gcatgcttca ggtccagtac cacggcatca agcaaggcgc cagcctcgac gtatggcggg
     2401 gcatgtcgta ccagaccgtc ctgacgccgg gcgatctgaa gaccggcgac gtgatctatc
     2461 cgttcgagaa ggcgaaagcg cagtagcctt aactcaaaac gacggcgcgg acttcggtcc
     2521 gcgccgtttt attttgcatc acccgcgggc ttacattccc agatagaact tgcggatcag
     2581 gtcgttgttg ttgagctcgt cagccgagcc gccttcgaac tcgatcttcc cgtgcacgat
     2641 cacgtagccg cggtcggcga tgcgcaaggc ctgcacgaag ttctgttcgg ccatcagcac
     2701 ggtgagatta agacgctcct tcagttcctt gatcttgtcg atggtgcgcg cgaccaggat
     2761 cggcgcgagg ccgaccgatg gttcgtccac cagcaggatt ttcggcgcca gcatcagcgc
     2821 gcggccgagc gccagcatct gctgttcgcc acccgacatc gagccggcaa gctggctgcg
     2881 ccgctccgcg aggcgcggga acgtctcgta gcaggcgtcg aggttctggt tgatctgcgc
     2941 gcgcgcggtc gagcggaacg cgccgagcgc gagattttcc tcgaccgtca gcttcggaaa
     3001 caggcggcgg ccttccggca ccagcgcgat gccgagatcg acgatctgct cggtggttag
     3061 cacggtgagg tcgtgctcgc tgccgtcgat cgaggccata atggtgccga cgtgcggccg
     3121 cacgatgccc atgatgcatt tcatcagcgt gcttttgccg ttgccgttgg taccgagcat
     3181 cacaacggtt tcgccggcct taacgtcgat gctgatgtcc tccagcacgc gcacggagcc
//
LOCUS       DATDHO010000029         1594 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_149883, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000029 DATDHO010000000
VERSION     DATDHO010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_149883"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(45..1334)
                     /locus_tag="VIY07_00515"
     CDS             complement(45..1334)
                     /locus_tag="VIY07_00515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004892544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEY6380271.1"
                     /translation="MLERYFRLSEQGTDVRTEFVAGVTTFLTMVYIVFVNPIILGKTG
                     MDQGAVFVATCVAAAVSTLVMALYANYPIALAPGMGINAFFAFTVVLTYKYTWQQALA
                     AVFCSGVLFFLISVLPIRQYVIDSIPQNLKLAVSAGVGLFLGIIALEEAKVVVDHPAT
                     LVTLGDLTQPTPVLMLLGFVLIAGLNYRRILGATLIGILIVTLIGLPFGLAQFNGVVS
                     MPPSIAPTLLQLDFSRVTELTFLIVVFSILFVDVFDNAGTLIGVTHRTGLMKNGKLAR
                     MKEALISDSFAAMFGALIGTSTTTSYIESAAGVSAGGRTGLTAAFVGVFFLLALFFAP
                     LAGMVPAYASAAALLYVACVMARGLAEIDWEDITEYAPAVVCAISMPLTYSIATGIGL
                     GFITYALAKLVSGKPREASPAVIVLALLFAIKFAVAG"
BASE COUNT          378 a          465 c          465 g          286 t
ORIGIN      
        1 gcgccggtcg caatcgggcc acgccaggcg ttgaacgcaa aaagtcagcc ggcaacggca
       61 aacttgattg caaacagtaa cgccaacacg atcaccgcag gcgaagcctc ccgtggcttt
      121 ccggaaacaa gcttggccag cgcgtacgta ataaagccaa ggccaatgcc ggtcgcaatc
      181 gaataggtca gcggcatcga gattgcgcac acaacggccg gtgcatattc cgtgatgtcc
      241 tcccagtcga tctcggcgag gccgcgagcc atcacgcaag cgacataaag cagcgctgcg
      301 gccgaagcat acgcaggtac catgcccgcc aagggcgcga agaacagcgc gagcagaaag
      361 aacacgccga caaaggctgc ggtgagcccg gtacgcccgc cggctgaaac gccggcggcg
      421 ctttctatat agctcgtggt cgttgatgtg ccgatcagcg cgccgaacat cgcggcaaag
      481 ctgtcggaaa tcagcgcttc tttcattcgc gccagcttgc cgtttttcat caagccggtg
      541 cgatgcgtta cgccgatcaa tgtcccggca ttgtcgaaca catccacaaa gaggatcgag
      601 aatacgacga tcaaaaatgt gagttcggtc acgcgcgaaa agtcgagctg cagcaatgtc
      661 ggcgcaatcg atggcggcat cgaaacgacg ccattgaatt gcgcaagccc gaacggcagc
      721 ccgatgagcg tcacgatgag gatgccaatc aaggtggcgc caagaatgcg ccgatagtta
      781 agtccagcta tcagcacgaa cccgagcagc atgagaaccg gtgtgggttg cgtcagatcg
      841 cccagcgtca ccagcgtggc ggggtggtca acgacgacct tggcttcctc gagcgcgata
      901 attcccagaa aaagcccgac gcctgccgac acggcaagct tcaggttttg cggaattgaa
      961 tcgatgacgt attgccgtat tggcaatacc gaaatcaaaa agaacagcac gccggagcag
     1021 aacacagctg cgagcgcctg ttgccaggta tatttgtaag tcagcacgac ggtgaaggcg
     1081 aagaatgcgt tgatgcccat gcctggcgcg agcgcaatcg gataattcgc ataaagcgcc
     1141 atcaccagag tgctgactgc ggcggcgacg caagtagcga cgaagaccgc gccctggtcc
     1201 atcccggtct tgccgagaat gatcggattg acgaatacga tgtagaccat ggtcaggaac
     1261 gtcgtcacgc cggcgacgaa ttcggtccgt acgtcggtgc cctgctccga aagacggaaa
     1321 tacctttcga gcacggcacc gatcggcgac tcgctcctcc gcgttggtga tgcccttttt
     1381 ggctgtttga ccatgtcgac cccgtgatct cgcaagccta cgcgtctgcg ttccgcaagt
     1441 cagatgcgat atggacgctg tggataccgt ggcatgtgcc gcttcgcttt agcgcaccgg
     1501 aggaacccaa ttcgctcccc acgctttgta gctcacggac tatagtcgtc cggggggcct
     1561 tcgcttggag ctcgccatgg atttggatcc cgta
//
LOCUS       DATDHO010000030        10919 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_1292, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000030 DATDHO010000000
VERSION     DATDHO010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 10919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10919
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1292"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            471..5816
                     /locus_tag="VIY07_00520"
     CDS             471..5816
                     /locus_tag="VIY07_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEY6380272.1"
                     /translation="MRAGDFSVRMGVEHEGVLGKIADTFNEIVASNERMAQQLERVGE
                     VVGREGKTRHRVKFGVSHGAWGEMESSINTLIDDLVWPTKEVTTAIAAVAQGDLLKTV
                     RTEVDGRPLKGEFLEAATIVNTMIKQLSVFTSEVTRVAREVGTEGKLGGQAQVREVTG
                     VWKDLTENVNSMANNLTAQVRNIAEVTIAVADGDLSKKITVDVRGEILQLKEAINTMV
                     DQLRSFASEVTRVAREVGTDGKLGGQAIVPGVAGTWKDLTDSVNAMCGNLTDQVRNIA
                     QVTTAVARGDLSRKISVDVRGEILELKDTINTMVDQLNGFASEVTRVAREVGTEGKLG
                     GQAAVPGVAGTWKDLTDSVNFMAGNLTAQVRNIADVATAIAGGDLSKKITVNVSGEIL
                     QLKETVNTMVDQLNAFAGEVTRIAREVGTEGRLGGQANVLGVAGTWKDLTDSVNSMAG
                     NLTAQVRNIAEVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNSFASEVTRVA
                     REVGTEGKLGGQAEVPEVAGTWKDLTDNVNFMASNLTAQVRNIAEVATAIANGDLSKK
                     ITVDVRGELLQLKETLNTTTDQLRSFAGEVTRVAREVGTEGRLGGQANVPGVAGTWKD
                     LTDNVNLLAANLTTQVRNIAEVTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLN
                     AFASEVTRVAREVGTEGKLGGQAQVSGVAGTWKDLTDTVNVMAANLTEQVRGIVKVVT
                     AVANGDLKQNLAVKSKGEVAALAETINNMTDTLATFAEQVTTVAREVGVEGRLGGQAN
                     VPGAAGTWKALTGNVNLLAANLTTQVRAIAEVATAVTKGDLTRSIQVDARGEVAELKD
                     NINTMIDNLRLTTDRNTEQDWLKTNLAKFTNMLQGQRDLATVGRLLLSELTPLVNAQQ
                     GVIYQVESEELHTLRLLSAYADDSVNGHPQRLHIGEGLIGQCAADKRRMLITDMPKRA
                     IPIGSALFKVVPSNIIVLPILFENQVKAVIELASVSQFTALQTMFLEQLTASIGIVLN
                     SIEATMQTEGLLKQSQQLAAELQTQQRELQQTNDQLEQKAQQLAERNVEVERKNQEIE
                     QARRALEEKAAELALTSKYKSEFLANMSHELRTPLNSILILGQQLADNPDGNLTSKQT
                     EFARTIHGAGTDLLNLISDILDLSKIESGTVTVEAEEIFFSNLLDAVARPFRHEAEAK
                     QLSFNVELDTALGRSLTTDSKRLQQVLKNLLSNAFKFTDRGGVQLKVSLAPTGWTSTH
                     PILSQAQSVVSFEVADSGIGIPAEKQKIIFEAFQQADASTSRKYGGTGLGLAISRELS
                     NLLGGEIQLRSSPTVGSTFTLYLPVTYAGPSVATRPPSMPGIAVTQMPSAPILPERPI
                     EQIPDDRHEIQPGDSILLIVEDDPHYCRVLIDLARDKGFKVLVAMRGAEALELAKQYQ
                     PTAVSLDVFLPDMLGWSVLTQLKQNPLTRHIPVQIITLDEDKHHGLARGAFSFVTKPT
                     TTEGVEAALRRIKEYATPRRKRLLVVEDNVAEQISISELLGYDDVEIETAGTGRDALD
                     SLRRQPADCVVLDLRLPDMSGFEVLEELSQDKVLSEVPVVVFTGRELSAEEDARLHTM
                     ARSIVVKGVESPERLLDETALFLHRVVTELPAEKQRMLERLTTSDEDLVGRTVLLVDD
                     DARNIFALSSVLERRGMRVLTATTGNEAIELLDSNNDIAIVLMDIMMPEMDGYQTMEQ
                     IRKNGNFRRLPIVALTAKAMKGDREKCLEAGASDYLAKSVNTEQLLSVLRSWLHR"
     gene            5828..7678
                     /locus_tag="VIY07_00525"
     CDS             5828..7678
                     /locus_tag="VIY07_00525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6380273.1"
                     /translation="MLNEKVNILLVDDQLAKLLTYRTILENVGENLLSANNATEALEL
                     LLKHDVAVVLIDVYMPDIDGFQLAAMIRNHPRFEKTALIFISAILLTDVDRLRGYEMG
                     AVDYVPVPVIPEVLRAKVKVFVELFRKTRQLEQLNKGLEARVAERTAELAASTLQLRQ
                     SERLRSLALAAGQMGSWEWNVARGTTVWDQGQCEIFGVPSTFVPTLESVQPLINPQDF
                     ELLVRAFRKATKESNTFQTEFRVLRPNGEVRWCTGTAAASFNDSGRLIWLSGVTADIT
                     ERKRAEERQILLAEEVDHRARNVVAVVQSIMRLTRADSIEEYIAALDGRIGALSNAHR
                     LLAGSRWEGADLNRLVEEEFAPYRAAGNERVSAQGPIVLLPPATAQTIALALHELATN
                     AGKYGALSSGAGRVELTWRTKPGQVELVWAEHDGPKITSPSRQGYGSRAIVAGIERQL
                     GGMVNFDWQESGLRCTLCVPYEGNELLQRHPFAPRQIDGVPSQTVASGIDPDEKRVLL
                     VEDEPLVSMMLADMLSAFGHKVDGPYSRFSDAIFAAKTNNLQAGILDVNLGGEKTYAV
                     ADILANRNIPFAFVTGYGPDSIVSAFSHAPVLQKPIEAAKLHALLQQIVR"
     gene            8019..9284
                     /gene="ispG"
                     /locus_tag="VIY07_00530"
                     /gene_synonym="gcpE"
     CDS             8019..9284
                     /gene="ispG"
                     /locus_tag="VIY07_00530"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEY6380274.1"
                     /translation="MPGRHNTVAVSIGGVTVGGGAPIVVQSMTNTDTADVEATARQVA
                     ALAGAGSELVRITVDRDEAAAAVPRIKERLLKLGVSAPLVGDFHYIGHKLLADHPACA
                     EALDKYRINPGNVGFKDKKDKQFSAIIEMALKYEKPVRIGANWGSLDQELLTRLMDEN
                     AKARSPRDARAVMHEAMVQSALGSAARAEELGLGQNRIILSAKVSAVQDLIAVYGELA
                     RRCDYALHLGLTEAGMGSKGIVASAAAMGVLLQQGIGDTIRISLTPEPAGDRTREVQV
                     AQELLQTMGLRTFVPLVAACPGCGRTTSTTFQELAADIQGFIRSSMPEWKTRYPGVET
                     LNVAVMGCIVNGPGESKHADIGISLPGTGEQPTAPVFIDGKKAATLRGPTLAADFKQM
                     VIDYIERRWGKTTRSTTDRSNVEEYSSFA"
     gene            9393..>10919
                     /locus_tag="VIY07_00535"
     CDS             9393..>10919
                     /locus_tag="VIY07_00535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEY6380275.1"
                     /translation="MKPRNLALGIERIGFYAMSHRMLCATVFVVLSIIAAFGFARVKV
                     DDSLSQLFRSDTEEFRTYEEVTRRFPSNEFDILIVIEGDRLLERSSLEKMRELAIELQ
                     LIDGTRGLISIFSAREPPKDGQIPPPLFPNPLPEGAEYQALVERVMSNEIIRDKMLSP
                     DGKLTLMVLALEPGATGPDHLGKIVDEVRNEVKTHLEGTGLKGELSGVPVMQHEIRTA
                     IQRDRLVYNTLGFVVGCLIAIMFFRRVSFMIIAAGPPLIAILLALGALGWFGFSLNMF
                     LNVMTPLIMVISFSDSMQLTFAARDRLLAGDDKVTAFRNALLIVGPACVLTHATAGVS
                     FIALQFSESDLVRTFGEAGLVAVTVALFAVLMGLPLLGVLLIRNEAEFVAGVRNMDTA
                     LNVLRRFCGWIAVRMVARPGLYSAISLLVVVLLSLGYAQLQARYRLADQVPDRQRAVQ
                     ASERLDVKLTGANPFEVYIQFPKGTSLYAPETLAVIAEVHALLERQPGVGNVWSLETL
                     R"
BASE COUNT         2367 a         3225 c         3277 g         2050 t
ORIGIN      
        1 attttttgcc tgaaagagag cgctgtttgc ggtgtccaac gcaattttgt caataagttc
       61 aaatatatag tcgcagaggc tgaacgaccg ccgataacca ttccccgggg aactttcgct
      121 cgattatcga atttaattgc tggcgggcgc tccaccatga gtaggctgga gcgggcggga
      181 ggttcgcggg ttctgcccca aaatgtctgg cgaacgctca tggtgttgag gcttaccaat
      241 ggtggctctt ccatgaggtt cggaccttgt cgcctcagat cgcccccggt gcattcgagt
      301 gcgccggatg agggtgggtt attcgggagg cgtcgatgga tcagaccaca atcacaaata
      361 agaagactgc caatggtgtt gccgcaaaaa aacgtcgacg cgcggaagat cgtgcctctg
      421 acctgacctc cccgaaggaa ttgcaagaac tacttcagtc gctgcgcgcg atgcgtgcgg
      481 gcgatttttc cgtaagaatg ggcgtcgagc acgagggagt gctcggaaaa attgccgaca
      541 ccttcaacga gatcgttgct tccaacgaac gaatggcgca gcagctcgag cgcgtcggag
      601 aagtcgtcgg tcgcgaaggc aaaacccgcc accgcgtcaa attcggcgtt tcgcacggcg
      661 cgtggggcga aatggaatcg tcgatcaaca ccctgattga tgatctggtc tggccgacga
      721 aggaagtcac aaccgccatc gcagcggtgg cgcaaggcga cttgctcaag accgtgcgaa
      781 ccgaagtcga tgggaggccg ctcaagggcg aattcctcga agccgcgaca atcgtcaaca
      841 cgatgatcaa gcaactcagc gtattcactt cggaagtgac gcgcgttgca cgtgaagtcg
      901 gcaccgaagg caagctcggc ggacaggcac aggtgcgaga agttaccggt gtgtggaaag
      961 acctgaccga gaacgtgaac tcaatggcga ataacctgac ggcccaggtt cgcaacatcg
     1021 ccgaggtcac gatcgctgtg gcggacggtg acctttcaaa gaaaatcacc gtcgacgtgc
     1081 gcggcgaaat ccttcagctg aaggaagcca tcaatacgat ggtggaccag ttgcgctctt
     1141 tcgcatcgga agtgacgcgc gttgcgcgtg aagtcggcac tgatggcaag ctcggcgggc
     1201 aggccatcgt gcctggtgtc gccggtacat ggaaggacct caccgactcg gtgaacgcca
     1261 tgtgcggcaa tctgactgac caggtccgta acatcgcgca agttacgacc gcggtggcac
     1321 gcggcgacct gtcgcgcaag atctcggtcg atgtgcgcgg cgagattctc gagctgaaag
     1381 acaccatcaa tacgatggtg gaccagctca acggcttcgc ttcggaagtc acgcgcgtgg
     1441 cccgcgaagt cggcacggaa ggcaaactgg gcggtcaagc cgccgtgccc ggcgtagccg
     1501 gcacatggaa agacctgacc gacagcgtga acttcatggc cggcaacctg accgcacagg
     1561 tccgcaatat tgccgacgtc gccacggcca ttgccggtgg cgacctttcg aaaaaaatca
     1621 ctgtgaacgt gtcgggcgag atcctgcagc tgaaagaaac cgtcaacacg atggtggacc
     1681 agctcaacgc tttcgccggc gaagtgacgc gcatcgcgcg cgaagtcggc accgagggcc
     1741 ggctcggcgg ccaggcgaac gtgctcggcg tggccggcac ctggaaggac ttgaccgact
     1801 cggtgaattc gatggcgggg aaccttaccg ctcaggtccg caacatcgcc gaagtgacga
     1861 ccgccgtggc acgtggtgac ttgtcgcgca agatcaccgt ggacgtgaaa ggcgaaattc
     1921 tcgagctcaa aaacaccatc aacacgatgg tggaccagct caattccttc gcgtcggaag
     1981 tcacgcgcgt cgcacgcgaa gttggcaccg aaggcaagct tggtggccag gccgaggtgc
     2041 cggaagtcgc gggtacctgg aaggatttga cggacaacgt taacttcatg gcctccaacc
     2101 tgaccgcaca ggtccgcaac atcgccgaag tggcgaccgc catcgcaaac ggcgacttgt
     2161 cgaaaaagat taccgtggac gtgcgcggcg agctgctcca gcttaaagaa acgctcaaca
     2221 cgacgaccga ccagctgcgc tcattcgccg gcgaagtgac acgcgtggcg cgcgaagtcg
     2281 gcaccgaagg ccgcctgggc ggccaggcca acgtgccggg cgtggccggt acgtggaagg
     2341 acttgaccga caacgtcaac ctgctggcag cgaacctgac aacacaggtc cgcaacatcg
     2401 ccgaagtgac gaccgccgtg gcgcgcggtg acttgtcgcg caagatcacc gtggacgtga
     2461 aaggcgaaat tctcgagctc aagaacacta tcaacacgat ggtggaccag ctcaatgcct
     2521 ttgcctcgga agtgacgcgc gtcgcccgcg aagtcggcac cgagggcaag ctcggcggtc
     2581 aggctcaggt ctccggcgtg gccgggacct ggaaggacct caccgacacg gtgaacgtga
     2641 tggcggcgaa cctcaccgag caggtgcgtg gcatcgtgaa ggtcgtgacc gccgtcgcga
     2701 acggcgacct caaacaaaac ctggccgtga aatccaaggg cgaggtggcc gcgcttgccg
     2761 aaacgatcaa taacatgacc gacacgctgg caaccttcgc cgagcaggtg acgacagttg
     2821 cgcgcgaggt cggcgtcgaa ggccgtctcg gcggccaggc caacgtgccc ggtgcggcag
     2881 gtacctggaa ggctcttacc ggcaacgtca acttgctggc cgcaaatctg acaacgcagg
     2941 tgcgcgccat cgccgaggtg gcgaccgcgg tgaccaaggg cgacctcacc cgatcaattc
     3001 aggtcgacgc gcgtggcgaa gtggccgagc tcaaagacaa catcaacacg atgatcgata
     3061 acctgcgcct gactacggat cgcaacaccg agcaggactg gctgaaaact aaccttgcca
     3121 agttcaccaa catgttgcag ggccagcgcg atctcgcgac ggtcggtcgc ctgttgctga
     3181 gcgaactgac tccactcgtg aatgcgcagc aaggcgttat ttaccaggtc gaaagtgaag
     3241 aactgcacac gctgcggctg ctgtcagcct atgccgacga tagcgtcaac ggccacccgc
     3301 agcggctgca catcggtgaa ggcctcatag gacaatgcgc cgctgacaaa cggcgcatgc
     3361 tcatcaccga tatgccaaag cgtgccattc cgatcggctc tgcattgttc aaggtggtac
     3421 cgagcaacat cattgtcttg cccatcctgt tcgaaaacca ggtcaaggca gtgatcgaac
     3481 tcgcttccgt gagccaattc accgcgctgc agacgatgtt ccttgagcag ttaaccgcga
     3541 gcatcggcat cgtgctcaat tcgatcgaag ccacgatgca gactgaaggt ctgctcaagc
     3601 agtcgcagca gctcgccgct gaattgcaga cgcagcaacg cgaattgcag caaacgaatg
     3661 accaacttga gcagaaggcc caacaactcg ctgagcgcaa cgtcgaagtt gaaaggaaga
     3721 accaggaaat cgagcaggcg cgtcgcgcgc tcgaagagaa ggcggccgaa ctcgcgctga
     3781 cttccaaata caaatcggaa ttcctggcca atatgtcgca tgagctgcgc accccgctta
     3841 acagcatcct tattctgggg cagcagcttg ccgacaatcc tgacggtaat cttaccagca
     3901 agcagaccga attcgcccgc accattcatg gcgccggaac agacttgctc aacctcatca
     3961 gcgacatcct cgatctttcc aagatcgagt ccggaacggt cacggtcgag gcggaggaga
     4021 tcttcttctc gaatctgctc gacgcggtcg cccgcccctt ccgtcacgag gcggaagcca
     4081 agcaattgtc ctttaacgtc gaactcgata ccgcgcttgg gcgcagcctc accaccgact
     4141 ccaagcgtct gcagcaggtt ctcaagaacc tcttgtcaaa tgctttcaag ttcactgacc
     4201 gcggcggggt tcagctcaag gtttcgcttg cgcctaccgg ttggacttcg acacacccaa
     4261 tcctcagcca ggcgcagagc gtagtctcgt tcgaggtcgc tgatagcggc attggcatcc
     4321 cagccgaaaa acaaaagatt atcttcgagg cattccagca ggcggatgcc agcaccagcc
     4381 gaaaatacgg tggcacggga cttggccttg cgatcagccg cgaattgtca aatctcctcg
     4441 gtggcgagat ccaattgcgc agttcgccaa cggtcggcag caccttcacc ctttatctac
     4501 cggtcaccta tgccggacca tccgtcgcca ctcgaccgcc aagcatgccg ggcattgcgg
     4561 tgacgcaaat gccaagcgcg cccattcttc ccgaacggcc gatcgaacag attccggacg
     4621 atcgccacga aattcagccc ggcgactcga ttctgctgat tgtggaagat gatccccatt
     4681 actgccgcgt gctcatcgat ctcgctcgcg acaaagggtt caaagttctt gtggccatgc
     4741 gcggcgccga agcactggaa ctcgcgaagc aatatcagcc gacagccgtg tcattggacg
     4801 tcttcctacc tgacatgctg ggctggagcg tgctgactca gctcaaacaa aatccgctga
     4861 cgcggcatat ccctgtgcaa atcatcacgc tcgatgagga caagcatcat gggctggccc
     4921 gaggcgcatt ctccttcgta accaaaccga cgacgaccga gggcgttgag gccgcgctac
     4981 gccggatcaa ggaatacgcg acgccgcgtc gcaagcggct cctcgtggtc gaggacaatg
     5041 ttgccgagca aataagcatc tcggaactgc ttggctacga cgacgtcgaa atcgagaccg
     5101 ccggcacagg tcgcgacgcg ctcgattcgc tgcgccgaca accagctgac tgtgtcgtgc
     5161 tggatcttcg gctgcccgac atgtcgggct tcgaagtcct ggaagaattg agccaggata
     5221 aggtgttgtc ggaggtcccc gtagtggttt tcacagggcg tgaattgagc gccgaggagg
     5281 acgcccgtct ccacacaatg gcgcgcagca ttgtggtcaa aggagttgaa tcgcccgagc
     5341 gtctgctcga tgagaccgcc ctcttcctgc atcgagtagt aaccgagctg cctgccgaga
     5401 aacagcggat gctggagaga ctcacgacct ctgacgaaga tctggtcggt cgtacagtgc
     5461 tgctggtcga cgacgatgcg cgcaatatct ttgcgctcag cagcgtgctg gaacggcgcg
     5521 gcatgagggt cctcaccgct accacaggca atgaggcaat tgagttgctc gattccaaca
     5581 atgacattgc catcgtgctc atggacatca tgatgcccga aatggacggg tatcagacga
     5641 tggaacagat cagaaagaac ggaaatttcc ggcggttgcc aatcgtcgcg ctcaccgcca
     5701 aagcgatgaa gggggaccgc gagaagtgtc tcgaggctgg cgcatcggac tacctggcaa
     5761 agtcggttaa cacagaacag ttgctgtccg tgctgcgcag ctggctgcat cgctgagttc
     5821 agaagccatg ttgaacgaaa aggtaaacat tcttcttgtc gacgatcagc tggcgaaact
     5881 tctgacctat cgaacaatcc tcgaaaacgt cggcgaaaat ctgttgagcg cgaacaacgc
     5941 gaccgaagcg cttgagctgc tgttgaagca tgacgtggcc gtcgttctca tcgacgttta
     6001 catgccagat atcgacgggt tccagctagc tgcgatgatc cgcaatcatc cgcgcttcga
     6061 gaaaactgca ttgattttca tttcggccat cttgttgacc gacgtggacc gcttgcgcgg
     6121 ctacgagatg ggcgcggtcg actacgttcc cgtgccggtt attccagagg ttttgcgcgc
     6181 gaaagtgaag gtgttcgtcg agctctttcg gaagacgcgc cagcttgaac agctgaacaa
     6241 gggtctggag gcgcgcgttg cggaacgcac tgcagaactg gcggcttcga cgttgcaact
     6301 tcgtcagagc gagcgcctgc gaagccttgc gcttgctgcc ggacaaatgg gcagctggga
     6361 atggaacgta gcgcgaggca caactgtctg ggatcagggt caatgcgaga tttttggggt
     6421 gccgagcact ttcgtgccca cactcgagag tgtgcagccg cttattaacc cgcaggattt
     6481 cgagttgttg gtgcgcgcat ttcgcaaggc gaccaaggaa tccaacacat tccagaccga
     6541 gtttcgcgtg ctcaggccga atggcgaagt gcgttggtgc accgggaccg cagcggccag
     6601 cttcaacgac agcggccgcc tcatctggct cagcggcgtt accgccgaca tcaccgaacg
     6661 aaaacgggcc gaagagcgcc aaatcctgtt ggccgaagag gtcgatcatc gtgcgcgcaa
     6721 tgtcgttgca gtcgtgcagt cgatcatgcg actcacccgg gcagatagca ttgaggaata
     6781 tatcgcagcg ctcgatggcc gcatcggcgc gctctcaaac gcccatagat tgctggcggg
     6841 atcgcgctgg gagggtgcag acctcaatcg tctggtcgaa gaagagttcg cgccttatcg
     6901 cgccgcgggc aatgaacggg tctcggcaca agggccgatt gttttgctcc cacccgccac
     6961 cgctcaaacc attgcgctgg ccttgcatga gctggccacc aatgcgggga aatacggagc
     7021 gttatcgagc ggcgctggac gcgtcgaact cacgtggcgc accaaaccag gccaggtgga
     7081 gctcgtctgg gccgaacatg acggcccaaa aattacctct cccagccggc aaggctatgg
     7141 cagtcgcgcg attgtcgcgg gcatcgaacg gcaactcggc ggaatggtga atttcgactg
     7201 gcaggagagc ggcctgcgtt gcaccttgtg cgtcccctac gaggggaatg aattgttgca
     7261 gcgacatccg ttcgcgccgc ggcagatcga cggcgtcccg agccaaactg tcgcatcagg
     7321 cattgatccg gacgagaaac gggtacttct cgtcgaagac gaaccactcg tgtcgatgat
     7381 gctggctgat atgctgtcgg ctttcggtca caaggtcgac gggccgtata gccgcttcag
     7441 tgacgcaata ttcgccgcca aaaccaacaa tctgcaagcg ggcattttgg atgtaaatct
     7501 gggcggcgaa aaaacttacg cagtcgccga cattctcgcc aaccgaaaca tcccatttgc
     7561 atttgtgacc gggtatgggc ccgacagtat cgtttcagca ttttcccacg caccggtgtt
     7621 gcagaagccg atagaagcgg caaagctcca cgccttgctt cagcaaatcg tgcggtaagg
     7681 cttccagtac agattcttgc ggcctggacg ccatggaacc aagcccgccg cacggcgttt
     7741 gtaggcggtc cacaggcaaa gaaaaaacgt caatgaccgc aagacaattc ctcctgagcg
     7801 aaagctcata ctgccgccga cgcgccgcga gatgtcccga tccattcctg gccgaggagc
     7861 tgcgccgcct ggcgaaacgc ttcgagcaaa ccgccaatgc tgttcaaccg ggcagcatta
     7921 ccgcagaggc agcccgggaa caggattccc actagccccg ggaactcgct aaactccggc
     7981 gcgtcgacac ggaacttttt ccatacagga gcaccgcatt gccggggcgc cacaacactg
     8041 tcgcggtgag tattggcggc gtcacggtcg gcggcggggc gccgattgtg gtgcagtcga
     8101 tgaccaatac cgacaccgcc gatgtcgagg cgacagcgcg gcaggttgcc gcgctggcgg
     8161 gcgccggctc cgagctcgtg cgcatcacgg tcgatcgcga tgaggcggca gcggcggtgc
     8221 cgcgcatcaa ggagcgcctg ctcaagctcg gggtgagcgc gccgctggtc ggcgacttcc
     8281 attacatcgg gcacaagctt ctggccgatc atccggcttg cgcggaagcg ctcgacaagt
     8341 accgcatcaa tcccggcaat gtcgggttca aggacaagaa ggacaaacag ttttccgcca
     8401 tcatcgagat ggcgctcaag tacgagaagc cggttcgcat cggcgccaac tggggctcgc
     8461 tcgaccagga gctgctgacg cggctgatgg acgagaacgc caaagcgcgc agcccgcgcg
     8521 atgcgcgcgc ggtgatgcac gaggcgatgg tgcagtcggc gctcggctcg gcggcgcggg
     8581 cggaggagct cgggcttggc caaaaccgca tcatcctctc ggccaaggtg tcggcggtgc
     8641 aggatctgat cgcggtctat ggtgaattgg cgcggcgctg cgactacgcg ctgcatctgg
     8701 gcttaaccga ggccggcatg ggctcgaagg gcatcgtggc ctcggcggcg gccatggggg
     8761 ttttgctgca gcagggcatc ggcgacacca tccgcatctc gctcacgccc gaacccgccg
     8821 gcgatcgcac gcgcgaggtt caggtggcgc aggaattgtt gcagaccatg ggcctgcgca
     8881 ccttcgtgcc gctggttgcc gcctgccccg gctgcgggcg caccacctcg accacgttcc
     8941 aggagcttgc cgccgacatc cagggcttca tccgctcatc gatgccggaa tggaagacgc
     9001 gctatccggg ggtggagaca ctcaacgtgg cggtgatggg ctgcatcgtg aacgggcccg
     9061 gggaatccaa gcacgccgac atcgggatct cgctgcccgg caccggcgag cagccgaccg
     9121 ctccggtgtt tatcgacggc aagaaggccg ccaccctgcg cgggccaacg ctcgccgccg
     9181 acttcaagca gatggtcatc gactatatcg agcggcgatg gggtaaaacc acacggtcca
     9241 cgactgaccg atcaaatgtg gaggaatatt catccttcgc ctagtggcaa ttttgcattc
     9301 ggcagtccat catttttcgt cacagctgca ccgggggatc agtgagcagc cttccgccat
     9361 ctgaccgcgt ctcgccagac cagccacgcg ccataaagcc gcgcaatctt gcactgggaa
     9421 tcgagcgcat tggattttac gccatgtcgc accgaatgtt atgcgcgacc gtcttcgtcg
     9481 tgctcagcat catagcggca ttcggtttcg cgcgcgtgaa ggtcgacgat tcgctcagcc
     9541 aactatttcg atccgatacc gaagaattcc gcacttatga agaggttacg cgccgatttc
     9601 cttccaacga atttgacatt ctgattgtca tcgagggaga ccggttactg gaaagatcat
     9661 ccctggaaaa aatgcgtgaa ctcgccatcg agctgcagct gatcgacggc acaagaggcc
     9721 tgatttcgat tttttccgcg cgcgaaccgc ctaaggatgg acaaatcccg cctcccctgt
     9781 ttcccaatcc gctgccggaa ggcgccgaat atcaggcgct tgtcgagcgc gtcatgtcga
     9841 acgaaatcat tcgcgacaag atgctgtcgc cagacggcaa gctgacattg atggtgctgg
     9901 ccctggagcc cggcgcaacc ggaccggatc atctcggtaa gatagtcgat gaggtccgca
     9961 acgaagttaa gacccatctg gaaggcaccg gactgaaagg cgagctatcc ggtgtcccgg
    10021 tgatgcaaca tgagattcgt accgcgatcc agcgagaccg cctggtctat aacacgctcg
    10081 gcttcgtagt cggttgtctc atcgcgatca tgttctttcg ccgcgtgtcg ttcatgatta
    10141 tcgcggccgg tccgccgctc attgccattc tactcgcact cggcgcgctt ggatggtttg
    10201 gcttcagttt gaatatgttt ctgaacgtga tgaccccact tatcatggtc atcagttttt
    10261 ctgacagcat gcagcttacc tttgctgctc gcgatcgcct gctggcaggc gacgataagg
    10321 ttactgcctt tcgtaatgcc cttctcatcg tcgggccagc gtgcgtacta acgcacgcga
    10381 cggcgggcgt atcgtttatt gccttgcagt tctcggaatc cgaccttgtt cgcaccttcg
    10441 gcgaggccgg cctggtggca gtaacggtcg cactgttcgc tgttttgatg ggactaccgt
    10501 tgcttggcgt actgctcatt cgcaacgagg ccgaattcgt ggcgggcgtc cggaacatgg
    10561 acaccgccct gaacgttttg cgcaggtttt gcggctggat cgcagtgcgg atggtggccc
    10621 ggccggggct ctattccgca atcagcctcc ttgtcgtcgt tctgctgtcg ctcggctatg
    10681 cgcagcttca ggcgcgctac cgtctcgcgg atcaggtgcc ggaccggcag cgcgccgtcc
    10741 aggctagcga acgcctcgac gtcaagttga cgggcgcaaa tccgttcgag gtctatatcc
    10801 aattcccgaa aggcacgtcc ctttatgcgc cggaaacgct ggcggtgatt gccgaagtgc
    10861 acgctttgct cgagcgccag cccggcgtcg gcaatgtgtg gtcattggag accttgcga
//
LOCUS       DATDHO010000031         5331 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_199356, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000031 DATDHO010000000
VERSION     DATDHO010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5331)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5331)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5331
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199356"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            255..1256
                     /locus_tag="VIY07_00540"
     CDS             255..1256
                     /locus_tag="VIY07_00540"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HEY6380276.1"
                     /translation="MAKSKKPLVIVTRKLPDPIELRMRELFDTRLNADDKPMTQSQLA
                     EAVRTADVLVPTVTDRIDASVLSKSGDQLKLIANFGNGVDNIDVATAVQRGITVTNTP
                     GVLTEDTADMTMALILAVPRRLVEGSHVLTTDKDWVGWSPTWMLGHRIWGKRLGIIGM
                     GRIGQAVARRARAFGLQIHYHNRRRVAPKTEEELDATYWESLDQMLARMDIVSVNCPH
                     TPATYHLLSARRLKMLRPEAYIVNTSRGEVIDENALSRLIDSGDIAGAGLDVFEHEPA
                     VNPKLVKLARAGKVVLLPHTGSATIEGRIDMGEKVIINIRTFMDGHRPPDRVLPSML"
     gene            complement(1273..2073)
                     /gene="moeB"
                     /locus_tag="VIY07_00545"
     CDS             complement(1273..2073)
                     /gene="moeB"
                     /locus_tag="VIY07_00545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HEY6380277.1"
                     /translation="MLDSKELERYARHIVLREVGGPGQAKLKAARVLVVGAGGLGAPA
                     LLYLAAAGVGTLGIVDDDEVSLSNLQRQVIFATEDIGRPKVERARDAVKRLNPFVNTE
                     AHNERLTAANALDLIAQYDLVADGSDNFATRYLVSDACYFAGKPLLTAAVGTFDGSIT
                     CIRAHERGADGRPNPTYRCLFPEPPPAGTVPACAEAGILGALPGVLGSLMALEAIREI
                     VGFGEGLVGRLLMVDARSMRFETLSYAWDSNNPLNGENPTIRNLSGHN"
     gene            2254..3696
                     /locus_tag="VIY07_00550"
     CDS             2254..3696
                     /locus_tag="VIY07_00550"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEY6380278.1"
                     /translation="MDRTRSAIILAILLSAVPALAQESSGMVPAPVQATEKPADVVRH
                     AAKRRVKAHRIAAPATVPAKGAALSTELARAEPTDTGNSEMSAGERLRIQSALLWSGD
                     YTDSFGGEDPFRSAVKNFQKRAKSRITGVLSPVERANLLAAAKSYEDEFGWTIVTDPS
                     TGVRLGLPLKFLPQVRDAARGTRWSATHSEVQVETFRVKSPEHRLAALFEQEKTQPSN
                     RKIENSALRDDSFYISGMQGLKKFSVRAYARDGEIRGFTLLFDQMMETIVAPVTAAMV
                     SAFSPFPERSSPFAALAKSVEYGNGLVVSAGGHIITDRNLVSGCEVIVAAGLGNADQI
                     AEDRNNGLALLRIYGARNLAPLALASDPSRKEDVTLVGIPDPKEQNDARKLTEIKARL
                     SGANAIELRRPVPMAGFSGAAALDAQGKFLGMMQMRNFVVASLDPAIPPVRLITAETI
                     RGFLAAHKIVSAPQGDDARAAVVRLICVRQ"
     gene            complement(3712..4485)
                     /locus_tag="VIY07_00555"
     CDS             complement(3712..4485)
                     /locus_tag="VIY07_00555"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007633805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEY6380279.1"
                     /translation="MSYENIIVETRGRVGIIRLNRPQALNALNKALIDELTRAVETFD
                     ADDKIGCMLITGSDKAFAAGADIKEMADKPFIEAYLGDFVSNWNAVAQTRKPVVAAVA
                     GFALGGGCELAMQSDIVVAADTAKFGQPEIKLGVIPGIGGTQRLAHAVGKAKAMDLIL
                     TGRTMDAAEAKESGLVARVVPAASLMDEAMKIAETIANMSLPSVLAAKEAINLAFESG
                     LSEGMAFERRIFHSLFATEDQKEGMKAFVEKRAPKWKHK"
     gene            complement(4500..>5331)
                     /locus_tag="VIY07_00560"
     CDS             complement(4500..>5331)
                     /locus_tag="VIY07_00560"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6380280.1"
                     /translation="RILAAELSKELGQQLIVDNRPGGALTIGLDLVAKSPPDGYTIGM
                     GPIGALAITRHMVARLPYNIERDFQPIALVARGHLLLAVSPKLPINSVKDLVDYAKKN
                     PGKLTNASSSNGSPGHVGGELFKYMTGTEIVHVPYRGGAPAISDLIAGHVDLMFESLQ
                     TMAPFAHDNKVRALGVSGAARSPAFPQLPTIAEAGVPGYLAPTWTGVIAPAGVPRPIV
                     DRLNAAINKALISEAFKEKFAKIGDEPGGGTPEDFAATIKADSAKWSDVVQRSGAKLD
                     "
BASE COUNT         1095 a         1587 c         1604 g         1045 t
ORIGIN      
        1 aagcccgctg acggaaccag tggcgccatc gctggcagac caggacggaa gaggcgacaa
       61 tccggcgata ccggctgcca agacgagcct gctcaacgac atccggaagc tttgtcttgt
      121 cacggccatc tggtaggaaa acgacgggaa ttcgcctgac gcacagtgtg ggcgagcacg
      181 gttaatgagg gctaaatcga tcgtacctgg cggtatttcc gcccttaccg gacaagtgca
      241 gcagttgaga tccgatggcg aaaagtaaaa agccgctggt cattgtgacg cgcaagctgc
      301 ccgatccgat cgagctgcga atgcgggaac tttttgatac ccgcctcaac gccgacgaca
      361 agcccatgac tcaaagccag cttgccgaag cggtgagaac ggccgacgtc ctggttccga
      421 ccgtcaccga tcgcatcgat gcgtccgtgc tcagcaaatc gggggatcag ctcaagctga
      481 tcgcgaactt cggaaatggc gtcgacaata tcgacgtcgc gaccgcggtt cagcgcggca
      541 tcaccgtcac caacacgccc ggcgtgctga ccgaggatac agccgacatg accatggcgc
      601 tcatcctggc agtgcctcgc cggctggtgg aaggctcgca cgtgctgacc accgataagg
      661 actgggtggg gtggtcaccg acgtggatgc tgggccaccg catttggggc aagcgacttg
      721 gcattatcgg catggggcgc atcggacagg cggtcgcgcg gcgggcgcgc gccttcgggc
      781 tgcagatcca ctatcacaat cggcgaagag tggcgcccaa gaccgaggaa gaacttgacg
      841 ccacctattg ggaaagcctc gaccagatgc tggcacgcat ggacattgtc tcggtcaatt
      901 gtccgcacac gcctgcgacc taccatttgc tgtcggcgcg tcgactgaaa atgctgcggc
      961 cggaggctta catcgtcaac acgtcgcgtg gcgaagtgat cgacgagaac gcactttccc
     1021 gacttatcga ctcgggcgac atcgccggag cgggtctcga tgtgttcgaa cacgaaccgg
     1081 cagtaaaccc gaagctggtc aagctcgcgc gcgccggcaa ggtcgtgctt ctgccgcaca
     1141 ccggttccgc gacgatcgag ggccgcatcg atatgggcga gaaagtgatc atcaacattc
     1201 ggacgttcat ggacggtcac cggccaccgg atcgggtgct gccgagcatg ttgtgatggt
     1261 cgtgcggcgc ggctaattgt gccccgacaa attcctgatc gtcgggtttt caccgtttag
     1321 aggattgttc gaatcccacg cataactcag cgtttcgaac cgcatcgagc gcgcatcgac
     1381 catgagcagg cggccgacca gtccctcacc gaagccgacg atttcacgaa tggcctcaag
     1441 cgccatcaac gagccgagta ctccgggcag cgcgccgaga atcccggctt cggcgcaagc
     1501 gggaacggtg ccggcgggcg gcggctcggg aaagagacaa cggtatgttg gatttggtcg
     1561 tccatcggcc cccctttcat gcgcacggat acaggtgatc gaaccatcaa aggtcccgac
     1621 ggcggcagtg agcaagggct tgccagcgaa atagcaggcg tcggagacga gatagcgtgt
     1681 tgcaaagtta tccgacccgt cggcgacgag gtcgtattgc gcgatcaggt caagagcatt
     1741 ggctgcagtc agtcgttcgt tgtgcgcctc ggtattaaca aacgggttta atcttttgac
     1801 agcatcgcgt gcccgctcga ctttcggcct gccgatgtct tcggtggcga agatgacttg
     1861 ccgctgcagg ttcgatagcg acacttcatc gtcgtccaca atgccaagcg tgccgactcc
     1921 ggcggcagcg aggtaaagca gtgccggagc accaagcccc ccggccccga ctacaaggac
     1981 acgcgcagcc ttgagcttcg cctgtcccgg gccgccgact tcgcgcaata cgatgtgacg
     2041 ggcatagcgt tcgagttctt ttgaatcgag catcatggtt aaacctagcg catgttccga
     2101 aactcgcgga atcgcttttc atgagcaaat ccgaggcccg caagctgatt cgcaaccgtg
     2161 aaaatgcttg gttaagaact ccaggatgcc ttgcgcgttg acctccattg gctaaggtga
     2221 gccaaaaata caggtggggg cggcgcggat acgatggacc ggactcggtc ggcgataata
     2281 cttgcgattc tgctcagcgc cgttcctgcg ctagcgcagg aatcgtccgg catggtgccg
     2341 gcgcctgtgc aagccaccga aaagcccgct gacgttgtcc ggcacgcagc gaagaggcgc
     2401 gtgaaggcac atcgtatcgc agccccggcg accgttcctg cgaaaggcgc ggcactaagc
     2461 accgaactcg ccagggccga gccgacagat acaggaaatt ccgaaatgtc cgcgggcgag
     2521 cgtcttagga ttcaatcggc gctactttgg tcgggcgact acaccgattc gttcggggga
     2581 gaagatccat ttcgttccgc ggttaagaat tttcagaagc gcgcgaagtc gaggattacg
     2641 ggcgtgctct ctccggtcga gcgagccaat ctgctcgcgg cagccaaatc gtatgaggac
     2701 gagttcggct ggactatcgt aaccgatcct tcgacaggag tgcgtctcgg acttccgctc
     2761 aaattccttc cgcaggtgcg ggacgccgca cgcggaacgc gatggtcggc aacgcacagc
     2821 gaggtgcagg tcgaaacgtt tcgtgtgaaa agtccggagc acaggctcgc cgccctgttc
     2881 gaacaggaaa aaacacaacc ttcgaaccgg aaaatcgaaa acagcgcctt gcgcgatgac
     2941 agtttctata tcagcggcat gcagggcttg aagaaattct ccgtgcgagc ctatgcccgc
     3001 gatggcgaaa tccgcggctt cactctgctg ttcgaccaga tgatggagac tattgtcgcg
     3061 ccggtcacgg cggcgatggt cagtgctttc tcgccgtttc cggagcgcag ttcaccgttc
     3121 gcggccctgg cgaaatcggt cgaatacggc aacggactgg tggtgagtgc gggcggtcat
     3181 attatcactg atcgcaatct cgtcagcgga tgtgaggtca tcgtcgccgc cggcctcggc
     3241 aatgccgatc agatcgcgga ggacaggaat aacggcctgg ccttgttgag aatttacggc
     3301 gcgcgcaatt tggcaccgct cgccctcgcg tctgatccgt ccagaaaaga ggacgtgacg
     3361 ttggtcggca ttccggatcc gaaggaacag aacgacgcaa ggaagctgac agaaatcaag
     3421 gcacggctat ccggcgcaaa cgcaatcgaa ttgcgccggc ccgtgccgat ggcgggtttt
     3481 tccggcgcgg cggcgcttga tgcgcagggc aaattccttg gcatgatgca gatgcgcaat
     3541 ttcgtggttg ccagtctcga cccggccatc ccgccagttc ggctcattac cgcggaaaca
     3601 atccgtggct ttcttgctgc ccacaagatt gtttccgcgc cgcaaggcga cgacgccagg
     3661 gcagcggtag tgagacttat ttgcgtacga caataattcg aatcgcccga cctatttgtg
     3721 tttccatttc ggcgcccgct tctcgacgaa ggccttcatg ccttccttct gatcttcggt
     3781 tgcaaacaat gaatgaaaaa tcctgcgctc gaacgccatg ccttccgaaa ggccgctctc
     3841 gaacgcgagg ttgattgcct ccttcgccgc cagaaccgac ggcagtgaca tatttgcgat
     3901 ggtttcggca attttcatcg cctcatccat cagactggcc gccggcacca cgcgtgcaac
     3961 caggcctgat tctttggctt ctgccgcgtc catcgtgcgc ccggtcaaaa tcaggtccat
     4021 ggccttggcc ttaccgaccg cgtgcgcgag cctctgcgtg ccaccgatgc cgggaataac
     4081 accaagcttg atctcgggct ggccgaactt cgccgtatct gccgcgacga caatgtccga
     4141 ttgcatggcg agctcacagc cgccgccgag ggcaaaaccc gccaccgctg cgactaccgg
     4201 cttgcgcgtt tgggctacgg cattccagtt ggaaacgaaa tcgccgagat aggcttcgat
     4261 aaatggcttg tccgccattt ccttgatgtc ggcgccggcc gcaaatgcct tgtcgctgcc
     4321 ggtgatcagc atgcagccga tcttgtcatc tgcgtcgaaa gtctcgacgg cccgtgtcag
     4381 ctcgtcgatc aaggccttat tgagcgcgtt aagcgcctgc ggccggttca gacgaatgat
     4441 tccaacccgt ccgcgggttt cgacgattat gttctcgtag ctcatgacaa atccctgcat
     4501 caatcaagtt ttgcaccgga gcgctgcacg acgtcgctcc atttggcgga atcagccttg
     4561 atggtggcgg cgaaatcctc cggcgttccg ccaccgggct cgtcgccaat cttggcaaat
     4621 ttctccttga aagcttccga gataagcgcc ttgttgatgg cggcgttgag tctgtcgacg
     4681 atcggccgcg gtactccggc tggcgcgatg accccggtcc aggtcggagc cagatatccg
     4741 gggacccctg cttcggcgat ggtcggcaac tgcgggaatg ccggagagcg cgcagcgccg
     4801 ctgacgccaa gcgctcgcac cttgttgtcg tgcgcgaagg gcgccatcgt ttgcaggctt
     4861 tcgaacatga gatcgacatg cccggcaatc agatcgctga tggccggcgc gccgccgcgg
     4921 taagggacgt ggacaatttc ggttccggtc atgtatttga acagttcacc gccaacatga
     4981 ccgggcgacc cgttgctcga cgaagcgttg gtcagcttgc cgggattctt ttttgcgtag
     5041 tcgaccaagt ccttcaccga gttgatcggc agcttcggag aaaccgccag caacagatgc
     5101 ccgcgggcaa ccaatgcaat cggctgaaaa tcccgctcga tgttgtaggg gagcctcgcc
     5161 accatgtgcc gcgtgatcgc gagcgcgccg atcgggccca tgccgatggt gtacccatcg
     5221 ggcggcgatt tcgctaccag atcgagaccg atcgtcagtg ccccgccggg ccgattgtcg
     5281 acaataagct gttgacccaa ttccttggac agctccgcgg ccagtatgcg g
//
LOCUS       DATDHO010000032         2866 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_248869, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000032 DATDHO010000000
VERSION     DATDHO010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2866
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_248869"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="VIY07_00565"
     CDS             <1..475
                     /locus_tag="VIY07_00565"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HEY6380281.1"
                     /translation="VPPKRCRDCRRNLAAHQRSMPMSEQNKEQIRRVIEDVYNRGDLG
                     VIDKVAASDLVIHASSQEIHGREGAKQYVAALRAAFPDIHFTVEHQIAEGDIVVTRWT
                     ARGTHKGKFQSVPATGRKIRLAGTDIDRINGGKVVECWAHVDELGLMRQLGAIEA"
     gene            509..1711
                     /locus_tag="VIY07_00570"
     CDS             509..1711
                     /locus_tag="VIY07_00570"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY6380282.1"
                     /translation="MTKAFDAIVVGARCAGSPTAMLLARKGYQVLLIDRASFPSDTVS
                     THLVHPLGVDALSRWGLLDRLAATGCPPIHTYRFDFGPLTISGSPGTEKSPVAFCPRR
                     TVLDKLLVDAAAEAGAEVREGFTVEKILFEGGLAVGIKGRSRHGDSIIEHARVIVGAD
                     GRRSFVAQAVQPEHYDEKPSLLAAYYTYWSGLPMDGRFENYIRDRRGFAAMPTHEDLT
                     LVIAGWPYAEFAENKRDIEGNYLKTIELAPAFADRLHRAKREARFAGAAVPNYFRRPY
                     GPAWILVGDAGYNKDFITAQGIMDAFQDAELCAAALDKSFSGARPFEDVMDEYQRARD
                     ARVKAMYDFTCQLATLEPPTPELQQLLAAIQGNQKAMDDFARMNAGTISPAEFFAPEN
                     VNAITAAA"
     gene            1789..2619
                     /locus_tag="VIY07_00575"
     CDS             1789..2619
                     /locus_tag="VIY07_00575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016555821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6380283.1"
                     /translation="MKIHNVKGGAGTNLHVRECGNPSGIPILFIHGWSQSHLCWSKQF
                     ESSLKDDVQMIAVDLRGHGMSDAPVEMDQYTDGDKWADDIEAVIDGLALDRPILVGWS
                     YGGYIISDYVHRKGQDKISGINFVAAAVVLGPKAFGPLVGPGFLENAPGASQNDLPTN
                     IAAIRRFLRACIVKPISQNDFEEILAFNMVVQPSVRGAMTRRELDFAPLLEGISVPVL
                     VTQGGADTVVLPAMADYILTHCKTAEASWYDGVGHAPFLEEPLRFNAELKRFAGSTRN
                     "
     gene            complement(2657..>2866)
                     /locus_tag="VIY07_00580"
     CDS             complement(2657..>2866)
                     /locus_tag="VIY07_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerB family tellurite resistance protein"
                     /protein_id="HEY6380284.1"
                     /translation="TRRLNNVLDNEGRQRTVKMMWQVVYADERVNEFESNIIWRIADL
                     LGVSSRQRIELRQRVVADRVALNPA"
BASE COUNT          635 a          806 c          844 g          581 t
ORIGIN      
        1 ggttcctccg aagcgctgcc gcgactgccg gcgcaatctc gccgcgcatc agaggagcat
       61 gccgatgtcg gagcagaaca aggagcagat acggcgcgtc atcgaggatg tctacaaccg
      121 gggtgatctc ggtgtcatcg acaaggtggc agcgagcgac ctggtcatcc atgcctcatc
      181 ccaggagatc cacgggcgcg aaggggccaa gcaatacgtc gcagcgttgc gcgcggcgtt
      241 cccggacatc cacttcaccg tcgagcacca gattgctgaa ggcgacattg tggtgacccg
      301 ctggaccgcc cgcggaacgc ataagggcaa gttccagagt gtccccgcaa ccggcaggaa
      361 aatccggctg gcgggaaccg acatcgatcg catcaacggc ggcaaggtcg tggaatgctg
      421 ggcacacgtg gatgagcttg gcctgatgcg gcagctcggc gcaatcgagg cctgatcctg
      481 ccagggacga cagagcgaga gaggcgcgat gaccaaggca ttcgacgcaa ttgtcgtggg
      541 cgcacgctgc gcgggatcgc cgaccgcgat gttgttggct cggaagggat atcaggttct
      601 cttgatagac cgcgccagct ttcccagtga cacagtgtct acccaccttg tgcatccgct
      661 tggtgtcgat gcgctctcaa ggtggggcct acttgatcgc cttgctgcga ctggatgccc
      721 gcccatccac acttaccgtt tcgactttgg cccccttacg atctccggtt cgccaggaac
      781 cgaaaaatcg ccggtcgcat tctgcccgcg gcggacggta ctcgacaagt tactggtcga
      841 tgcagcggcc gaggccggcg cggaggtgcg cgaaggcttc accgtcgaga aaatcttgtt
      901 tgagggcgga cttgcggtcg ggataaaggg ccgctcgcga cacggtgatt ccattatcga
      961 gcatgctcgc gtcatcgtcg gcgccgatgg ccggcgctcg tttgtggccc aagcggttca
     1021 gcccgagcac tatgacgaga agccctcttt gctcgccgcg tactacacct actggagcgg
     1081 gctgcccatg gacggcagat tcgagaacta tatccgcgat aggcgcggat ttgcagccat
     1141 gccgacccac gaagatctga cgctcgtcat cgccggttgg ccatacgcgg aattcgcgga
     1201 aaacaagaga gacatcgaag gcaactactt gaagacgatc gagttggcac cagctttcgc
     1261 cgatcgcctg catagagcca agcgggaagc acgttttgcc ggcgcagctg tgccgaatta
     1321 tttccgcagg ccctatggcc cggcttggat acttgtcggg gacgccggtt acaacaaaga
     1381 ctttataacc gcgcaaggga tcatggacgc cttccaagat gccgaactct gcgcggcagc
     1441 actcgacaaa tcattctccg gcgcaaggcc attcgaggat gtaatggatg agtatcaacg
     1501 cgcgcgcgat gcacgggtaa aggcaatgta cgacttcacc tgtcagcttg cgacgctgga
     1561 accgccaacg cctgaattgc agcagctcct tgctgcgatt caaggcaatc agaaggcaat
     1621 ggacgacttc gcgcggatga acgcgggcac gatatcacct gcggagttct tcgcacccga
     1681 gaacgtcaat gcgatcacag cggccgcgtg aggcaggcat tgccatgaag agttcactcc
     1741 cggtccttta ggttgggagt agagcaacat tgatcggcag gattcgagat gaaaatccac
     1801 aacgtcaaag gcggagcggg caccaatttg cacgtgcgcg aatgcggaaa tccgagtgga
     1861 atcccaattc tatttattca cggatggtca caaagccatc tctgctggtc aaagcaattt
     1921 gagagctcgc ttaaggacga cgtacaaatg atcgctgtcg atcttcgcgg tcacgggatg
     1981 tccgatgcac cggtagaaat ggatcaatat accgatggtg acaaatgggc cgacgacatt
     2041 gaggccgtca tcgatgggct tgctcttgat cgaccaatat tggtcggctg gtcatatgga
     2101 ggctatatca tttctgacta tgtgcacaga aaaggtcagg acaagatttc tggtatcaat
     2161 tttgtcgctg ccgctgtggt ccttggccca aaggctttcg gtccgcttgt gggcccgggt
     2221 ttcctggaga acgcaccagg cgcgtctcag aacgatcttc caaccaatat tgcggcaata
     2281 cggagattct tacgtgcgtg catcgtcaag ccaatctcgc aaaacgattt tgaagaaatc
     2341 ttggctttca acatggtagt tcaaccaagc gtgcggggcg cgatgactcg acgcgagctt
     2401 gactttgcgc cgctccttga agggattagt gtgccggtgc tcgtcactca aggcggcgcg
     2461 gataccgtag tactgcctgc catggccgac tacattctaa cgcactgcaa gaccgcggaa
     2521 gcatcgtggt acgacggcgt cggtcatgca ccctttttgg aagaaccgct gcgtttcaac
     2581 gccgaattaa agcgtttcgc cggaagcaca cgcaactagg ggctgccgcg cgcgggcgat
     2641 ttttgtccat tccaaactag gccggattga gcgcgaccct atcggccaca acccgctggc
     2701 gaagctcgat acgctgacga gaagacactc ctagcaggtc ggcgatacgc cagatgatat
     2761 tgctctcaaa ttcgttcaca cgttcatcag cgtaaacgac ctgccacatc attttaacgg
     2821 ttcgttgccg gccttcattg tcgagaacat tattgagccg gcgggt
//
LOCUS       DATDHO010000033         1919 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_298576, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000033 DATDHO010000000
VERSION     DATDHO010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_298576"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            401..1117
                     /locus_tag="VIY07_00585"
     CDS             401..1117
                     /locus_tag="VIY07_00585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HEY6380285.1"
                     /translation="MSRRPKKSAAMRRTSHASRGAVRVGAPAAKIAGNRKRAGEGVMP
                     GMTTNKKTTQRQGFKTNEFIVYPAHGVGQIVAIEEQEVAGAKLELFVINFIKDKMTLR
                     VPTAKIVSVGMRKLAEAPLVKRALETLKGRARIKRTMWSRRAQEYEAKINSGDIVAIA
                     EVVRDLYRSETQPEQSYSERQLYEAALDRLSREIAAVQRVTETEAIKEIEAALAKGPR
                     RGPKPAEEGGSDEGVEDEAA"
     gene            1285..>1919
                     /locus_tag="VIY07_00590"
     CDS             1285..>1919
                     /locus_tag="VIY07_00590"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6380286.1"
                     /translation="MTAIRGYVAPTTEADALGVHSLDQFVLTVPDASVAQDFYANFGL
                     DVRRDGNALAIKTFGHDHRWGSVVETSKAKALHHLSFGCYTEDLPQLKARIEGQGIKL
                     IDPPPGFESNGFWFRNHEGVLIEVKVGPKVSPDRKAESQWISVPAGVPGATTREKAPP
                     VRPRRLSHVLIFTRDVSESIAFYERTLGLRLSDRASDLVAFMHGIHGSDHHL"
BASE COUNT          395 a          572 c          590 g          362 t
ORIGIN      
        1 gcctgacgcc aaggagtggg atgggaaacc cagcaagttc gagaagttct tttcacccga
       61 atccggatcc ggcgactgag gcctcacacc gggataccgc ttcgacttgg aacacggttt
      121 ttgcggtgga ggacgttaac cgactcgacg gaatcgtgcg aatttggagc ggaaattggc
      181 attctacgtc gccataaggc tttgattccg cccaaaaatg tgctatacat gtaaaaaatg
      241 gaaaggaact aacgacgtgg ccatcggtgc gctcccccgt tcgggagcct tatttttcgg
      301 tggctgagtt cccccgtttt ccagtttaga gggcgtgaaa ttccacgcgt gagcagtggc
      361 aggaaaagcg cgtcataaat cgaagaaagg taccgccggc atgagccgga gacccaaaaa
      421 gtctgctgca atgcggcgga cctcccacgc ctcacgcggt gccgtccgcg tcggggctcc
      481 cgcagccaag attgccggca atcgcaagag ggccggcgaa ggagtcatgc ccggaatgac
      541 caccaataag aagactactc aacgacaagg ctttaagacc aacgagttta tcgtctatcc
      601 ggcccacggg gtgggccaga tcgtggcgat cgaggaacag gaagtcgcgg gcgccaagct
      661 cgaactgttc gtcatcaatt ttatcaagga caagatgacc ttgagggttc cgaccgcgaa
      721 gatcgtgtcg gtcggtatgc gcaagctggc cgaggctccc ttggtcaagc gcgccctcga
      781 gaccttgaag ggccgcgccc gcatcaagcg caccatgtgg tcgcgccgcg cccaggaata
      841 cgaagccaag atcaattcgg gcgacatcgt cgcgattgcc gaggtcgtgc gtgacctcta
      901 ccggtcggag acccagccgg agcagtccta ttcggagcgg cagctttacg aagccgcgct
      961 tgaccgcctc tcccgtgaga tcgcagcggt gcagcgggtc actgaaaccg aggcgatcaa
     1021 ggagatcgag gctgcgctcg ccaagggtcc tcgccgtggt ccgaaaccgg ccgaagaggg
     1081 cggttccgac gaaggtgtcg aggacgaggc agcctgagcg caggaagctc ggtgcacgtt
     1141 tcggaagccc ggccatgtgc cgggcttctg tcttttcggg acccaaactg attgaacttt
     1201 ctgccgcgcc gcgcgcagtt gcccgcgacg cttgcctggc ctatatgccg ctttaaccat
     1261 ctccggcgac acagggagta aggcatgacc gctatccgcg ggtacgttgc gccgaccacc
     1321 gaagccgatg cgcttggcgt gcattcgctc gaccagtttg tgttgacggt gcccgatgcg
     1381 tcagtagcgc aggattttta cgccaatttc ggcctcgacg tgcggcgcga cggcaacgcg
     1441 cttgcgatca agaccttcgg ccacgaccat cgctggggct cggttgtcga aaccagcaaa
     1501 gccaaggcgc tgcatcattt gtcattcggc tgctacaccg aggacctgcc gcagctcaag
     1561 gctcgcatcg aagggcaggg gatcaagctt atcgatccgc cccccggctt cgagagcaac
     1621 ggcttctggt tccgcaatca tgagggcgtt ctgatcgagg tgaaggtcgg gccgaaagtg
     1681 tcgccggacc gcaaagcgga aagtcagtgg atttccgttc cggccggcgt gcccggcgcc
     1741 accacgcggg agaaggcgcc gccggtgcgt ccgcgccgac tttcacacgt gctgattttc
     1801 acgcgcgacg tatctgaatc gatcgccttc tatgaacgga cgcttggctt gcgcctgtcc
     1861 gaccgcgcct ccgatctcgt cgcgttcatg catggcatcc acggcagcga tcatcatct
//
LOCUS       DATDHO010000034         2239 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_446784, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000034 DATDHO010000000
VERSION     DATDHO010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2239
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_446784"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..607)
                     /locus_tag="VIY07_00595"
     CDS             complement(<1..607)
                     /locus_tag="VIY07_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6380287.1"
                     /translation="MKLPRRHFLHLAAGVAAFPALSRVAWAQTYPTQPLRLILGYPPG
                     GSADITARLTGQWLSERLGQPVIIESRPGAATNLATEAVVRAAPDGYTLLLIAPANAI
                     NATLYDKLNFNFLRDIEPIAGIIRFPNVVVVNPSLPIKSIPELIAYAKANPGKLNMAS
                     SGNGSTIHMSGELFKMLTGINMVHVPYRGGAPALTDLIAGQV"
     gene            1775..>2239
                     /locus_tag="VIY07_00600"
     CDS             1775..>2239
                     /locus_tag="VIY07_00600"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380288.1"
                     /translation="MNWSRRGIALLGAAAAIFMAAEAQAQKPIRIGYPVILSGPGALI
                     GEPSMKGAQMFVEEINAKGGVLGRKIELVIRDTKGNADEAVRVARDLILRENVDFLFG
                     TLTSAEGPAVSPIAKENKIVFVVPVVKTDQLVAKENLHPYIFRTASNTTIEGR"
BASE COUNT          471 a          630 c          671 g          467 t
ORIGIN      
        1 ggacctgccc ggcgattaaa tcagtgagcg ccggcgctcc cccacggtag ggcacatgga
       61 ccatgttgat gcccgtcagc atcttgaaca gttcgcccga catatggatc gtggacccgt
      121 tgccggagga cgccatgttg agcttgccag gattagcctt ggcatacgcg atcaattcgg
      181 ggatcgactt gatcggaagc gatggattca ccaccaccac gttgggaaaa cggatgatgc
      241 ccgcgatagg ctcgatgtcg cggaggaaat tgaaattaag tttgtcataa agcgtggcgt
      301 tgatggcatt tgccggcgca ataagaagga gtgtgtagcc gtcaggcgcc gcacgtacga
      361 ccgcctcggt ggcgagattg gtggcggcac cgggccggct ttcgataata accggctggc
      421 cgagccgctc cgagagccat tggcccgtca gtcgagcggt aatgtcagca gagccgcctg
      481 ggggatagcc gaggatcagc cgaagtggtt gagtcggata ggtctgcgcc caagcgacgc
      541 gtgaaagggc cgggaaggcg gcaacgcccg ctgccagatg cagaaagtgc cggcgtggaa
      601 gtttcatgat gcctgctcca atttataacc tcgctggcgg ctcgcataag acgctacacc
      661 aacacccttg attgggttaa gcgatctgat gtcccctgct ggcccttagc ggacatcgca
      721 gttgcgcgcc acatgtccgc tttctgggta aagcagacat gagttcagca gtaagatcgg
      781 ctcataagta cggagcatct gcgtaccgca atatgtgcgg tttccccttt gggcaattga
      841 tgccgcctta ccgttgcgtt cacgttggct cgagtttgga cgtgtgttca atggaggctg
      901 acgatgactc gcttgatatt ggctaccatc gccgctcttg ctggtgtgtt cctaggtcta
      961 cagccggcaa aagcacaggc tccctggtgc gcggtgatct cgttgggcac gggtagtgtg
     1021 tattgggatt gtcgatacag ctcaattgaa caatgtcgac cgaatgtgtt ggcgggcaat
     1081 cgtggcttct gcaatcccaa cccgtacttt gccgctgcgt ttcagccgga cgaacgccga
     1141 cgctaccgga agaagaaaca ttaactgcgc cgacagccgc gacatatttt cgacagggga
     1201 gccgagccat gaaatgcatc gggtttgcag tttgctccgt cttcgcactc cttctgttat
     1261 taagtgcggg accactcaat gcgcgagatg ccgatcttgc ctcttacacc ttcgcggcgg
     1321 ctcagacagc caaacagaaa tgcatgaaca cctgtcgtgc acgctatcga gactgtcgtc
     1381 gtctcaacca gttaccatcg ttcgagtgtc ggaatgttta ccaggactgc acccggtaca
     1441 cttgtactgg tttaggacca ggatgaccga cgtgcttttt gctgccgtga gcgacgccaa
     1501 tgcggagcat cgtcgttgcc ggtcctgcga ctcgaagaag cggctttccg gaccggacat
     1561 agtcccaccg catgactggc cggtccgacc cgcaaagaaa cgcaacgttg gcgtagcgcc
     1621 gccgcagggg ccagcaagcg aggcccgctg tcctcggctt cgaggctgag gtcgcgttga
     1681 caggcgcgcc agcgccactt agccttttcc gaagtacaaa aatgttttcc gcaatacgga
     1741 aaacttcagc atccgcctca tcagggagga caagatgaac tggtcaagac gtggcattgc
     1801 attgcttggc gccgctgctg ctatcttcat ggcggcggag gcacaggcgc agaagcccat
     1861 ccgtatcggc tatccggtga tcctatcggg tcctggcgca ctcatcggcg aaccttcgat
     1921 gaagggtgcg cagatgttcg tggaggagat caacgccaag ggcggcgtgc tcggccgcaa
     1981 aatcgagctc gtcatccgcg acaccaaagg caatgccgat gaggcggtgc gcgtcgcgcg
     2041 cgacctgatc ctgcgcgaga acgtcgattt tcttttcggc acgctcacct cggccgaagg
     2101 tccggcggtc tcgccaatcg cgaaggagaa caagatcgtc ttcgtggtgc cggtcgtgaa
     2161 gaccgaccag ctcgtcgcaa aggaaaatct gcacccctat attttccgca cggccagcaa
     2221 cacgacaatc gagggccgt
//
LOCUS       DATDHO010000035         5834 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_50818, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000035 DATDHO010000000
VERSION     DATDHO010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5834
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_50818"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            312..1718
                     /gene="asnS"
                     /locus_tag="VIY07_00605"
     CDS             312..1718
                     /gene="asnS"
                     /locus_tag="VIY07_00605"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: protein motif:HMM:NF003037.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004816 - asparagine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006421 - asparaginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HEY6380289.1"
                     /translation="MDDKVLSVRWILAGKAPQDGPVTVKGWVRTRRDSKAGISFVHLS
                     DGSSFHPVQVVAPNTLPNYSDEVLKLTTGCAIEATGMIVPSPAKGQPFEMQASAIAVI
                     GWVDDPDTYPIQPKPHSLEFLRDVAHLRPRTNVIAATTRVRHTLARAIHRFFDQNNFL
                     WVNTPVITGSDAEGAGELFRVSTLDLANLPRTPQGQVDFVQDFFGREAFLTVSGQLNV
                     EAYCLALSKVYTFGPTFRAENSNTSRHLAEFWMIEPEIAFANLLNNATLAEDLLKFTF
                     KALLEQSQEDLAFFDERIEKGLVAKLQGIVNSEFVRMDYGEAIAVLERAKEKFEFPVS
                     WGMDLQSEHERYLTEKHVKKPVIVMNYPKDIKAFYMRANDDGRTVAAMDVLAPGIGEI
                     IGGSQREERLEILDARMAERGIDKEHYGWYRDLRRYGTVPHAGFGLGFERTIAYVTGL
                     SNVRDAIPFPRTPGNARY"
     gene            complement(1746..2591)
                     /locus_tag="VIY07_00610"
     CDS             complement(1746..2591)
                     /locus_tag="VIY07_00610"
                     /inference="COORDINATES: protein motif:HMM:NF041278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CmcJ/NvfI family oxidoreductase"
                     /protein_id="HEY6380290.1"
                     /translation="MPQAAVPTAESALAPDHIDATLNYIIDDGSKVFTIVASPGGTDT
                     RSGGTADPRRVTIHNGRPHAKDFVLERHGFRFVCHDTKVEDFYDEDQIRRLYYPEMEA
                     LIKSESGAKRVVVFDHTLRTADDEIRESKRTREVVRRVHNDYTEWSAPQRVRDILPDE
                     AEELLQRRFAIIQVWRPIRHPVETYPLAMADAQTLSPQDMIVSERRAPGRIGQTYAIK
                     YNPEHKWYWFPRMRREEAYVFKVFDSMKDGRARWTAHTAFEDPTTPPHARPRESIEIR
                     TMAFF"
     gene            complement(2906..2990)
                     /locus_tag="VIY07_00615"
     tRNA            complement(2906..2990)
                     /locus_tag="VIY07_00615"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2954..2956),aa:Tyr,seq:gta)
     gene            3144..3953
                     /locus_tag="VIY07_00620"
     CDS             3144..3953
                     /locus_tag="VIY07_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEY6380291.1"
                     /translation="MARKRWQPSSRPRRDRRKRPPPRTRFRSAPDAHGPALLYGWHTV
                     KAALENPSRRIRRLLATENALRRLADDGVPLPLKPELVRPDEIDARLGPDAVHQGLLA
                     EADPLPVPSIDELESGGVVLVLDQITDPHNVGAILRSAAAFAVRAIVTTARHSPEATG
                     VLAKSASGALELVPLVLVQNLARGMEELRARGFLLVGLDSTGETDLADLTLRTPLALV
                     LGAEGKGLRQLTRSTCDHVARIDLPGEIKSLNVSNAAALGLYVVIRHLRDA"
     gene            complement(3973..4338)
                     /locus_tag="VIY07_00625"
     CDS             complement(3973..4338)
                     /locus_tag="VIY07_00625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380292.1"
                     /translation="MRGRIAGAIGAVSAAAAHAADIPSGLGVGGNLYSPLVARIEPVI
                     VFDFEPGVIVRTYWYPPWQNRHYFPRTGKRPKIGRREILPKHRMSKPEEYFRYWSASS
                     FPDSPGRYAMPPASDSEQQ"
     gene            4504..4779
                     /locus_tag="VIY07_00630"
     CDS             4504..4779
                     /locus_tag="VIY07_00630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380293.1"
                     /translation="MIHRPSISRAKSSQPSRKNFRQRYDDLEAQRAHLVARLHRPGES
                     SKQHPGYKRALKLLNEIYRREKLPQRFAVLHAASWLITLLEDLTTFL"
     gene            5196..5705
                     /locus_tag="VIY07_00635"
     CDS             5196..5705
                     /locus_tag="VIY07_00635"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR family protein"
                     /protein_id="HEY6380294.1"
                     /translation="MHSGTTRALGPNASVFLNEVVSTGAAARLEVTFKDKTRLTLGEK
                     TKLTLDKFVFNPAAGRGRIGFRVSGAFRFLSGQVSKLARSDVRVTTPFAAIGVRGTEF
                     WGGPIDDQALGVFLIEGAVRVSNAAGAQTLNRPGQGTNIARSGAAPGPVTLWPPDKVN
                     RALATVTFR"
BASE COUNT         1167 a         1709 c         1767 g         1191 t
ORIGIN      
        1 aaaatgctcc atgctgcgct tctccttctg atgcttgagg ccgtgaccac ggacctcgtt
       61 tcaccatcag cctgaagcgc agcacccaaa atcttcagct atccacaaga acgctcggcc
      121 gattacccca tctttcgggg gcaagcacat gtccgctttc gtcgtcgcta tcgggtgtaa
      181 agcagacatc gcttgttgcg gcgcatatgt ccagcttgtg ccccaaagcg aacgtgagcg
      241 gctaaggatt accgttgtgc ggcaagcgtg ataaatctct cgccctaacg actagggata
      301 actcttgatc aatggacgat aaagtattga gcgttcgctg gatcttggcc ggcaaggcac
      361 cgcaggatgg gccggtcaca gtgaaaggct gggtacgcac gaggcgggat tcgaaggcgg
      421 gcatttcgtt cgtgcacctt tcggatggat cgtcgtttca tccggtgcaa gtggtcgcgc
      481 cgaacacatt gcccaattat agtgatgagg tgctgaaact tacgaccggt tgcgcgatag
      541 aggcgacggg aatgatcgtc ccgtcgcccg ccaagggcca accgttcgaa atgcaggcga
      601 gcgcgattgc ggtgatcggg tgggtggacg accccgacac gtatccgatc caaccgaagc
      661 cacattcgct agagttccta cgcgacgtcg cgcatcttcg gccgcgcaca aacgtgattg
      721 cggcaactac tagggtgcga cacaccctgg cgcgggcgat ccatcggttt tttgaccaga
      781 acaactttct ttgggtcaat acgccggtca tcactgggtc cgacgcggaa ggcgcgggcg
      841 aactattccg ggtatcgacg ctggacctcg ccaatctgcc gcggacgccg cagggccagg
      901 tcgatttcgt gcaagatttt tttggccgtg aagcgttcct gacggtgtcg gggcagctta
      961 acgtggaggc atactgcctc gcgctctcta aggtctatac gttcgggccg acgttccgtg
     1021 cggaaaattc taacactagt cgccacctcg ccgagttctg gatgatcgag ccggaaatcg
     1081 ctttcgccaa tcttttgaat aatgcaacgc tggcagagga tctactgaag ttcaccttca
     1141 aagctctgtt ggagcaaagc caggaagatc tcgccttttt tgacgagcgg atcgagaagg
     1201 gcctggtggc gaagctgcag gggatcgtca actcggagtt cgtccgcatg gactacggcg
     1261 aggcgatcgc cgtgcttgag cgggcaaagg agaaattcga gttcccagta agttggggca
     1321 tggacctgca gtctgaacac gagcgctatc tgacagagaa gcatgtgaag aagccagtga
     1381 tcgtgatgaa ctacccgaag gacatcaagg cgttctacat gcgcgcgaat gacgacggca
     1441 ggacagtcgc tgctatggat gtgttggcac ccgggatcgg tgagatcatc ggcggtagcc
     1501 agcgcgagga gcgcctcgag atactagatg cgcgcatggc ggaacgcggc atcgacaaag
     1561 aacactacgg ctggtaccga gatctgcgcc gctacggtac cgtgccgcac gcaggttttg
     1621 gcctcggctt cgagcgcaca attgcctatg tcacgggcct ctccaacgtg cgcgacgcga
     1681 ttcccttccc gcgaacaccc ggaaatgcca gatattgatg cgcaggactt ccgtggtgcg
     1741 cgcccctaaa aaaatgccat cgtgcggatt tcgatgcttt cgcgcggccg cgcatgcggc
     1801 ggggtggtgg gatcctcgaa cgccgtgtgc gcggtccagc gcgcgcggcc gtccttcatc
     1861 gaatcaaaca ccttaaatac ataggcctcc tcgcgccgca tgcgcgggaa ccagtaccac
     1921 ttgtgttccg gattatactt gatcgcatag gtctggccga tgcgtccggg ggcgcgccgc
     1981 tctgacacaa tcatatcctg tggcgacagc gtttgcgcat ccgccatggc aagcggataa
     2041 gtctccacag gatggcggat cggccgccaa acctggatga tggcgaagcg ccgctgcaac
     2101 aactcttcgg cttcgtcagg gagaatatcg cgcacgcgct ggggggccga ccattccgtg
     2161 tagtcgttgt gaacacggcg gacgacctct cgggtcctct tcgactcgcg tatttcgtcg
     2221 tcggcggtgc gtagcgtgtg gtcgaatacg acgacgcgct tggcgccgct ctcgcttttg
     2281 atcagagctt ccatctctgg atagtagagc cgccggattt gatcctcgtc atagaagtcc
     2341 tcaactttgg tgtcgtggca cacgaagcga aagccgtggc gctccaacac aaaatctttc
     2401 gcatggggac ggccgttgtg aatggttacg cggcgcggat cggccgtgcc gcctgagcgt
     2461 gtgtcggtac cgccgggact ggcgacgatg gtgaaaacct tgctaccgtc gtcgataatg
     2521 tagttcagcg tcgcatcgat atggtccggc gcgagagcgg attcggcagt cggtactgcg
     2581 gcttgcggca tggcgaactc cgtgtcgctc gccttcaatt taggtgtcgt ggcggcgcaa
     2641 gggaagcgca gccttacggc caacgggctg cgatgatcac gttccgaagc ttttcagcca
     2701 acgtcaatgc ctgtcctaac ccaagtattg attgctgtag tggcggacgt atggcctctc
     2761 tctacaccga ggccgcgaac cgagctctac tcgcgaaaca agcgatggcg aagctcgcga
     2821 tctgaaataa acaggcccgc acctaatgaa aaggtgcggg ccgcaaaacg aaaaaagaaa
     2881 taatttcaga cagataattt tcgaatggtg ggggaggcag gactcgaacc tacgaaggca
     2941 tagccagcgg atttacagtc cgcccccttt gccgctcggg acactccccc gaaaccgccg
     3001 caccgcattg atctcgaaag acaatcggct gtgccggccg gctggtcggg atgtgccggt
     3061 tttatgggga tggacctgcg cggagtcaat ggagagctcg ttctgcggtt tgcaaagccg
     3121 tggaacgcat gggaataact tcgatggccc gaaaacgatg gcagcccagc tcgcgaccac
     3181 ggcgcgaccg ccgcaagcgc ccgccgccgc ggacccggtt ccgcagcgct cctgatgctc
     3241 atggtccggc cctgctgtac ggctggcata ccgtcaaggc cgcacttgaa aacccctccc
     3301 gccgcatccg ccgtctgctg gccacggaaa atgcattgcg ccggcttgcc gatgatggcg
     3361 ttccgttacc cctcaagccc gagctggtcc gaccggacga gatcgatgcc cggcttggtc
     3421 ccgacgccgt gcatcagggt ctgttggcgg aggccgatcc cctccccgtc ccttcaatcg
     3481 acgaactcga gtccggaggc gttgtcctgg tcctcgacca gataaccgat cctcacaatg
     3541 tcggcgccat tcttcgatct gccgcggcat ttgcggtcag ggcaatcgta acgaccgctc
     3601 gccatagtcc ggaagcaacc ggcgtccttg cgaagtccgc atcgggtgcc ctcgagctcg
     3661 tgccgctcgt gctggtgcag aatctcgcgc gcggcatgga agagctgcgc gcgcgcggct
     3721 tcttgcttgt tggactcgac agcaccggtg agaccgatct tgccgatctt acgttgcgca
     3781 cgccgcttgc cctggtgctt ggtgccgaag gcaagggctt gcggcaattg acgagatcaa
     3841 cctgtgatca cgtagcgcgc atcgacctgc cgggcgagat caagagcttg aacgtgtcga
     3901 atgccgctgc gctcggcctg tacgtcgtca tccgacattt acgcgacgcc tgatcccatc
     3961 aggagggcga ggctattgtt gctcggaatc ggacgccggc ggcatcgcgt acctgcccgg
     4021 cgagtcggga aacgatgacg ccgaccagta gcgaaaatat tcttccggct ttgacatgcg
     4081 gtgcttgggc aggatttcgc ggcgaccaat ttttggccgc ttccctgtgc gcggaaaata
     4141 atgacgattt tgccaagggg ggtaccagta ggtacgaaca ataacgcccg gctcgaaatc
     4201 aaagacgatc acgggctcga tccgcgcgac gagaggcgag tacaggttgc cgccgacgcc
     4261 gaggccggat ggaatgtccg ccgcatgtgc cgccgcggcg ctgactgccc ctattgcgcc
     4321 tgcaatgcgg ccgcgcatgc atcgcgctcc agttgcgcca cgaattcggc cgtattttat
     4381 acgaacgtcg gggaatgaac ccgctcaatc gcggggtaat attaatctgg ccactggaat
     4441 ttccgcgtcg catcgacttt ctgttttcgg ccgagaaagc cgccctcaac agagttaaca
     4501 gccgtgattc atcgcccttc gatttcgcga gcaaagtcgt cgcagccgtc gcgcaagaat
     4561 tttcgccagc gctatgacga ccttgaagca cagcgtgcgc atctggttgc gcggctgcat
     4621 cggccgggcg aatcttcaaa gcagcacccg ggctacaagc gtgcgctaaa gctgctcaac
     4681 gagatctatc gtcgcgaaaa actcccgcag cgatttgcgg tgctccatgc tgcttcctgg
     4741 ctgatcaccc tgctggaaga tctcacaacc ttcctgtgac tagcgttcgc ttgcgcgtgg
     4801 caaattcgtt gagcgctgct cgcgattttc ttttcatcca atggcttgcg acaggcgttt
     4861 gcaacctttt gcctaaaagc ccgcgatatc actcgcatat agccaagcgc ggcctcgcac
     4921 gcctttttct cggaagcctc gtaccacggg tacggggttc ttttccctgt cacatgcgtt
     4981 ctgcgcgcga tgagcaggat gcgtggaccg cttcggccga gcagcgttcc aggcattggg
     5041 cgtgcggtcg cgttgtgcca gacctggttc gagggcataa caggcaggca tgttgtatcg
     5101 gccagtcgcg atagcggtcg ctcttttttg tggcttcgcc ggaggtcagg tcgcgggtca
     5161 agaagcgatc ggcaatacag ggagaggcca gcggagtgca tagcggcacc acacgtgcgc
     5221 ttggccccaa tgcgtccgtc tttctcaacg aggttgtatc gaccggtgca gcggcacgac
     5281 tggaagtcac tttcaaagac aaaacgcggc tgacgctcgg cgagaagacg aaactgaccc
     5341 tcgataaatt cgtctttaac ccagccgcag gacgcggaag gatcgggttc agagtgagtg
     5401 gcgccttccg gtttctctcc ggccaggtgt ccaaactggc gcgctccgac gtcagggtga
     5461 cgacgccttt tgcggccatc ggcgtgcgag ggacggaatt ctggggcgga ccgatcgacg
     5521 atcaggcact cggcgtgttc ttgatcgaag gtgccgtgcg cgtgtcgaac gcggcgggcg
     5581 cgcagaccct gaaccgcccc ggccagggca ccaatatcgc cagatctggc gcggcgcccg
     5641 gaccggtcac cttatggccg ccggacaagg tcaaccgcgc cctcgcgacc gtgacgtttc
     5701 gataaataat acattggttg cgaacgtttc agtgcgatgt ccgctaaggg ccaatggcgg
     5761 acatcacgcc gtaacgggaa ttgcgttgag tgagcgtcgc actgtattga acatctgcgc
     5821 cgcgcccacg aaat
//
LOCUS       DATDHO010000036         1581 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_150194, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000036 DATDHO010000000
VERSION     DATDHO010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150194"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..92)
                     /locus_tag="VIY07_00640"
     CDS             complement(<1..92)
                     /locus_tag="VIY07_00640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein usg"
                     /protein_id="HEY6380295.1"
                     /translation="MVSEDFRKQALGYGLTTAHILYRRPDHRWLP"
     gene            344..661
                     /gene="groES"
                     /locus_tag="VIY07_00645"
     CDS             344..661
                     /gene="groES"
                     /locus_tag="VIY07_00645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEY6380296.1"
                     /translation="MKFRPLHDRVVVKRIDAEEKTAGGIIIPDTAKEKPSQGEIIAVG
                     PGGRDENGKLFSIDLKVGDTVLFGKWSGTEVKIDGQDLLIMKESDVMGVIEGGAAAKK
                     KAA"
     gene            698..>1581
                     /gene="groEL"
                     /locus_tag="VIY07_00650"
     CDS             698..>1581
                     /gene="groEL"
                     /locus_tag="VIY07_00650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY6380297.1"
                     /translation="MAAKDVKFSVEARDRMLRGIDILNNAVKITLGPKGRNVVLDKSF
                     GAPRITKDGVTVAKEIELADKFENMGAQMVREVASKTSDIAGDGTTTATVLAAAIVRE
                     GAKAVAAGMNPMDLKRGVDLAVEAIVEDLKKNSKKVTSNEEIAQVGTISANGDREIGD
                     FLAKAMQKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRAEMEDP
                     YILIYEKKLSALQELLPLLESVVQAGKPLLIVAEDVEGEALATLVVNKLRGGLKVAAV
                     KAPGFGDRRKAMLQDIAVL"
BASE COUNT          367 a          466 c          477 g          271 t
ORIGIN      
        1 ggcagccagc gatggtcagg ccgccgatac aggatgtgcg cggtcgtcag gccgtagcca
       61 agagcttgtt tgcgaaaatc ttccgaaacc atcgcaccac cgtttctgat tcgaagattg
      121 ctttccagcg aatcttgcga agctgcctac cgccggcggc gaagccacct ggcgtaaacc
      181 cctcgcgcag cgacgcggtt ccttgaagtg ccgtaatcat tgattctacg ggcgtttcag
      241 aaattattgg cactcgatcg cgatgagtgc taaaggcctc ccgcgcgaaa gcgcgcttgg
      301 ctgcgagcca gcaggaaaaa actcaaaatt taggaggact gccatgaagt ttcgtccgct
      361 tcacgaccgc gttgtcgtca agcgcatcga tgccgaggaa aagactgccg gcggcatcat
      421 catccccgat accgcgaaag aaaaaccctc gcagggcgaa atcatcgccg tcggcccggg
      481 cggccgcgac gaaaacggca agctgttttc gatcgacctc aaggtcggcg acaccgtgct
      541 gttcggtaaa tggtcaggca ccgaagtgaa aatcgacggt caggatctcc tcatcatgaa
      601 ggaatccgac gtcatgggcg tgatcgaagg cggcgctgcc gccaaaaaga aggccgccta
      661 aggaccggtc tgaaatctaa tcagaggaac acaaacaatg gctgctaaag acgtcaaatt
      721 ttctgtcgag gcccgcgacc gcatgctgcg cggcatcgac atcctcaaca atgcagtgaa
      781 gatcaccctc ggcccaaagg gccgcaacgt cgtgcttgac aaatcgttcg gcgctccgcg
      841 catcaccaag gacggtgtca cggtcgcgaa ggagatcgag ctggcggata agttcgagaa
      901 catgggcgca cagatggtgc gcgaagtcgc gtccaagacc tccgacatcg ccggcgacgg
      961 caccaccacg gccaccgtat tggctgcggc gattgtgcgc gaaggggcca aggcggttgc
     1021 tgccggcatg aatccgatgg atctcaagcg cggcgtcgat ctcgctgtcg aggctatcgt
     1081 tgaagacctc aagaagaact ccaagaaagt cacctcgaac gaagagatcg cccaggtcgg
     1141 cacgatctcc gcgaatggcg accgcgagat cggcgacttc cttgccaagg ccatgcagaa
     1201 ggtcggcaac gagggcgtga tcacggtcga agaggcgaag tcgctcgaga ctgagctcga
     1261 cgtggtcgaa ggcatgcagt tcgaccgcgg ctacatctcg ccctacttcg tcaccaatgc
     1321 cgacaagatg cgagcggaga tggaggaccc ctacatcctc atctacgaaa agaagctgtc
     1381 cgcattgcag gagctgctgc cgctgcttga gtcagtggtg caggccggca agccgctgct
     1441 catcgtggct gaggacgtcg agggcgaggc acttgccaca ctcgtcgtca acaagctgcg
     1501 cggcggcctc aaggtcgcgg cagtcaaggc gcccgggttc ggcgatcgcc gcaaggccat
     1561 gctccaggac atcgcggtcc t
//
LOCUS       DATDHO010000037         2082 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_199540, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000037 DATDHO010000000
VERSION     DATDHO010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199540"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(141..956)
                     /locus_tag="VIY07_00655"
     CDS             complement(141..956)
                     /locus_tag="VIY07_00655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY6380298.1"
                     /translation="MSRANGSAYAELFSIDTLPVSAIGLRMVAAANLVEVAALVGATA
                     RATMLNALMGGQSLTATELAYCANVSRATASGHLSKLVAARLLTVTREHRFSYYRIAS
                     PLVATMLESIKVVAAIEVPPRRQPRSAKDDALCFARSCYDHLAGQIGVAVTDALVSMG
                     HIVLTDEGGEVTASGERFLSAFGVDLRLRTRRIFCQPCLDWSERRYHLKGLVGARILD
                     RLLELGWLKCVSGSRALQLTSSGREGLSETFQIEINNEGVPAARLCDPRRLTA"
     gene            1005..1661
                     /locus_tag="VIY07_00660"
     CDS             1005..1661
                     /locus_tag="VIY07_00660"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY6380299.1"
                     /translation="MGMAAVIYKKGAPDNFVWEEIKVGSPERGQVRLRSTAVGVNFAD
                     TYHRAGIPHPMIVGDPPVVVGFEGVGEIEELGPGVTEFSVGERVCTCLPPLGAYSQER
                     LYPADKLIKVPKDSALDDVQLAGLILKGMTAQYLLHRTHKVQPGDYVLIHAAAGGMGH
                     ILCPWARHLGATVIGTVSTNEKAEIARNLGCHHVINYTTEDFVAVTRKITDGKGVDVV
                     "
     gene            1668..2006
                     /locus_tag="VIY07_00665"
     CDS             1668..2006
                     /locus_tag="VIY07_00665"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY6380300.1"
                     /translation="MGKDTLQRSLDCLRRVGMCAAYGQASGVPDPIDIVKDLGARGSL
                     IITRPALSHYISNRSEIDAAAKSLFDAVARGVVASNVVKTFPLREAAAAHKFIGGRKT
                     TGSIVMLPFA"
BASE COUNT          481 a          594 c          596 g          411 t
ORIGIN      
        1 gattagagaa gcggacatgc gcagcgcaaa caacgatgtc cgctatgggc cagaagcgga
       61 cacagccgca cacttagaat cgtcgaaagg tgggaacgct tacctggggc atttgcgttg
      121 caaatgaccc ttcgctcagc ctaggccgtc agccgtcgtg ggtcgcataa tcgagcggct
      181 ggcacaccct cgttgttaat ctcgatctgg aaggtttcgg ataggccctc ccttccagac
      241 gacgttagtt ggagcgcacg gctgcccgac acacatttaa gccagccgag ctccaataga
      301 cgatccagaa tccgagctcc gacgagtccc ttgaggtgat aacgacgctc gctccagtcg
      361 agacaaggct ggcagaaaat ccgccgcgtc cgcaacctca gatcgacgcc gaacgcggaa
      421 aggaaacgct cgcccgaagc cgtgacttca ccgccttcat ctgtgagtac gatgtgtccc
      481 atggatacaa gtgcatctgt aacagcgact cctatctgac cagccaggtg atcgtagcaa
      541 cttcgggcaa aacagagtgc atcatccttt gctgatcgcg gctgacggcg gggtggcacc
      601 tctatggcgg cgacgacctt gatgctctcc agcattgtcg cgaccagcgg ggacgcgatc
      661 cgataatagc tgaaacggtg ctcgcgagtg acagtcaaaa gccgcgcggc aaccagtttg
      721 cttaggtgcc cgctcgccgt cgcgcgagag acattggcgc agtaagcaag ctcagtggcc
      781 gtcagcgact gcccgcccat aagggcatta agcatcgtcg ctcgtgcagt ggcacccacg
      841 agcgcggcca cttccaccag atttgccgcc gcgaccatcc ttaaccctat tgctgatacc
      901 ggaagcgtat caatcgaaaa cagttcggca taggccgaac cgttcgcgcg agacaattgc
      961 gaacctcgca acaagaatgc gcctgacaac aggaggaacg catcatggga atggcggcgg
     1021 taatctacaa gaaaggcgca cccgacaact tcgtgtggga ggagatcaag gtcgggtctc
     1081 ccgaacgtgg ccaggtacgt cttcgcagca cggccgtcgg cgtgaatttt gctgatacgt
     1141 accatcgagc aggtatcccg cacccgatga tcgtcggcga tcctccggtt gttgtcggtt
     1201 tcgaaggagt tggtgagatc gaggagttgg gtcctggcgt caccgagttc tcggtcggcg
     1261 agcgagtttg cacctgcctt cccccactcg gcgcctatag tcaggagcgt ctttaccctg
     1321 ctgacaagtt gatcaaggtt ccgaaggact cggcattgga tgacgttcaa ctggcaggac
     1381 taatcctgaa ggggatgacg gcgcaatatc tactgcatcg aacgcataag gtgcagccgg
     1441 gagattatgt gctgatccat gcggctgccg gtggcatggg ccatatcctt tgtccttggg
     1501 cgcggcatct cggagccact gtgattggta ccgtcagcac caacgagaag gccgagatcg
     1561 ctcgaaatct cggttgccat cacgttatca attacacgac cgaagacttc gtagctgtca
     1621 cccgcaagat tacggacgga aaaggcgtag acgtagtcta ggagtcaatc ggtaaggaca
     1681 cgctgcaaag gtcgctcgac tgcttgcggc gtgtcggtat gtgcgctgct tacggccagg
     1741 cgtcaggcgt tcctgatccg atcgacatcg tcaaagattt gggcgctcgc gggtcactca
     1801 ttatcacccg ccctgcgctc tcgcattaca tatcgaaccg aagcgaaatc gatgccgcgg
     1861 caaaatccct gttcgatgcc gtcgcacgag gggtcgtagc gagcaacgtt gtcaaaacct
     1921 ttccgcttcg agaggctgca gccgcgcaca agttcatcgg cgggcgcaag acgacgggct
     1981 cgattgtcat gcttccattc gcgtaagcgg caaaaaaacg acttcgaggc actcaatcca
     2041 cagaaagaga atatcatgtc gatcatacgc catgaaatta ga
//
LOCUS       DATDHO010000038         1583 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_199582, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000038 DATDHO010000000
VERSION     DATDHO010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_199582"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VIY07_00670"
     CDS             <1..298
                     /locus_tag="VIY07_00670"
                     /inference="COORDINATES: protein motif:HMM:NF020376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HIRAN domain-containing protein"
                     /protein_id="HEY6380301.1"
                     /translation="RRKSPEGVDRRRYVYKEIGPGESIELVRELADQRDKHAVAYRHR
                     GVHLGYVPKKHDWVAPAIDDGRRLVAIVDKVKVGGIFRRRAKFVRIRIAVLDGR"
     gene            complement(357..1245)
                     /locus_tag="VIY07_00675"
                     /pseudo
     CDS             complement(357..1245)
                     /locus_tag="VIY07_00675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008129831.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
     gene            complement(1277..>1583)
                     /locus_tag="VIY07_00680"
     CDS             complement(1277..>1583)
                     /locus_tag="VIY07_00680"
                     /inference="COORDINATES: protein motif:HMM:NF016535.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY6380302.1"
                     /translation="LTLLLVLVVSREPWLELSTIAKSSPPSWIGGVFGTIYIVASIIL
                     LPRFGAATVGALLIAGQMLTSVAFDHFGLFGLPERPIDMYRAAGAGLLILSVLLVRT"
BASE COUNT          404 a          460 c          445 g          274 t
ORIGIN      
        1 caggcgcaaa tcgcctgagg gagtcgatcg ccgccgctat gtctacaagg agattggacc
       61 gggcgaatcg atcgaactcg ttcgcgaact tgccgatcag cgcgacaagc atgccgtggc
      121 atatcggcat cgcggcgtcc acctcgggta cgtgccgaag aaacatgatt gggtcgcccc
      181 cgctatcgac gacggacgta ggctggtcgc gatcgtagac aaggttaaag ttggcggcat
      241 ctttcgtcga cgcgcaaagt tcgtgcgcat ccggattgcg gtccttgacg gccgctgacg
      301 gcaactgagc ggcactgagc ggcactgagc ggcaaagagc aaatgtccgc cttgggttat
      361 gagcggacat tggctgcggt ttccgtggta gcgatccata tcccggcaaa tacagcaatc
      421 agcccgatga tgagattgag agtaattggc tcaccaacca actgggtagc gagcaggcct
      481 gccgctatcg gattgacggt catcgtattt gccactcgcg ttggtgtcgc tcgttcgaga
      541 gccaataccc acagaataaa cgcgagcgcg ccgccaccta cgccgagata aacaccggct
      601 agccattgtg ggaattcaaa agtgtccaag atggcgatac ggcccgtcag caatccaacc
      661 gccacaagcg cgaccgctcc cgcgcccatg cccaacgtga ggaagccaag cgcgcttgga
      721 cctttggata aacggacggg accaaacatt gtagaatgcc atgcataaga ctgcgccggt
      781 cattatcaat tcgcctcgcc aagccccgct tggagcggcg ggaaggccag atgcgagcgc
      841 agcgaaaacg ccaaaaaccg cgatgcagac tccgacggtt ttcctcttgg tcaatggctc
      901 tattccgagt aacgcgccaa cgagcatggt ctgcagaggc agcgttgaaa gagcaaggct
      961 cgcgcgagcc gccgtcgtat aactgaccgc gatgttatac aggacgaaaa agagtccaaa
     1021 gaagcatatc cccaatgcgg caacagccag ccagtccctg cgctgcggcc atcgtacccg
     1081 caggaaaagc gcggtcggta atacacatag aatccctata ccccagcgca gaatagcaag
     1141 cgtgatcggg tcggcgctgc caaccaaata gcgggtaatg gcagcggcag tgccgcccaa
     1201 tgcacttgag acaactgcaa taagaacccc aaaccattgg ctcaaaccgc gccccccatt
     1261 tgtgtcgctg aaagtctcag gttcgtacta gcagcacgct caggataagc agacccgctc
     1321 cggctgctcg atacatgtca atcggacgct ctgggagccc gaaaagccca aaatgatcga
     1381 atgccactga ggtgagcatt tgacccgcaa tcaataaggc acccacggtc gcagcaccga
     1441 aacgaggaag cagtatgatt gaggccacga tgtagatggt gccgaaaact cctccgatcc
     1501 aagatggcgg cgaacttttt gcgatcgtgg acaattcaag ccagggttcg cgactaacca
     1561 ccagtacaag gagcaacgtc agc
//
LOCUS       DATDHO010000039         3411 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_150259, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000039 DATDHO010000000
VERSION     DATDHO010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3411
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150259"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..689)
                     /locus_tag="VIY07_00685"
     CDS             complement(<1..689)
                     /locus_tag="VIY07_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b N-terminal domain-containing
                     protein"
                     /protein_id="HEY6380303.1"
                     /translation="MSGHSTYKPQNKFLQWLEKRLPIGGLIHSSFVVYPVPRNLNYLW
                     TFGGILAFMLGVQIVTGIVLAMHYTPHVDFAFRSVEIIMRDVNYGWLLRYLHANGASM
                     FFLAVYIHMFRGIYYGSYKDPREVLWILGVIIYLLMMATGFMGYVLVWGQMSFWAATV
                     ITNLFSAIPGVGDAIVTWLWGGYAVGNPTLNRFYSLHYLLPFVIAGVVVLHIWALHVA
                     GQNNPTGIEPKS"
     gene            complement(713..1240)
                     /gene="petA"
                     /locus_tag="VIY07_00690"
     CDS             complement(713..1240)
                     /gene="petA"
                     /locus_tag="VIY07_00690"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEY6380304.1"
                     /translation="MTTVSSAEHTRRDFLYIATGAVGAVGAAATLVPLIAQMNPDAST
                     IAAGAPIEVDLAPIADGQIIKVFWRSKPIFIFHRTKKEIEEAQKVNVASLPDPQPDSA
                     RVKEGHDQWLVVIGICTHLGCIPLAHQGEYGGWFCPCHGSVYDTAGRIRQGPAPKNLE
                     LPPYKFVSDTKIQIG"
     gene            1588..2049
                     /locus_tag="VIY07_00695"
     CDS             1588..2049
                     /locus_tag="VIY07_00695"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007567377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HEY6380305.1"
                     /translation="MRIALYEPDIPQNTGTILRLCACLGIEVHIIEPAGFPVTDRAFR
                     RAGMDYLDQVSLTRHPSFAAFEEWRIHERLALVLLTTAAERSYLEHGFSDDQVLLFGR
                     ESAGVPEAVHKAADVRLRVPMRPGMRSINVAMAAAMVAGEALRQAGGFKVD"
     gene            2121..3011
                     /gene="hemF"
                     /locus_tag="VIY07_00700"
     CDS             2121..3011
                     /gene="hemF"
                     /locus_tag="VIY07_00700"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HEY6380306.1"
                     /translation="MDAGQLEARKTRTRTWFETLRDDICAAFETLEDALPDNAPFADR
                     DAGRFVRTPWQRTDHSGEPGGGGVMALMHGRVFEKVGVHCSTVYGEFAPEFRKEIPGA
                     GDDPRFWASGISLIAHLHNPHVPAVHMNTRFVVTSKAWFGGGADLTPVLDRRRTQTDP
                     DSIAFHAAMKTACDLHAEIAPYDKYRKWCDEYFFLKHRNESRGIGGIFYDYLETDWEE
                     TFAFTQDVGRAFLRVYPGLVRKNFATPWTDAEREEQLIRRGRYVEFNLLYDRGTIFGL
                     KTGGNVESILSSMPPIVKWP"
     gene            complement(3018..3411)
                     /locus_tag="VIY07_00705"
                     /pseudo
     CDS             complement(3018..3411)
                     /locus_tag="VIY07_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042483.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
BASE COUNT          698 a         1061 c         1034 g          618 t
ORIGIN      
        1 gatttcggct cgatgccggt cggattgttc tgaccagcga catgcagcgc ccagatgtgc
       61 agcaccacaa cgcccgcgat cacaaacggc agcaggtagt gcagcgaata gaagcgattg
      121 agggtcggat ttccgaccgc atagccaccc cacagccagg tcacgatcgc atcgccgacc
      181 ccgggaattg cagaaaacag gttggtgatg acggtcgcag cccagaagct catttgcccc
      241 cagaccagca catagcccat gaaaccggtt gccatcatca gcaggtaaat gatgacacca
      301 aggatccaga gcacctcacg cggatccttg tatgacccgt aatagatgcc ccggaacatg
      361 tgaatataaa cggcgaggaa gaacatcgat gcgccgttgg catgcagata gcgcaacagc
      421 caaccgtagt tgacgtcgcg catgatgatc tcaacggacc tgaacgcgaa gtcgacatgc
      481 ggggtgtagt gcatcgccag cacgatgccg gtgacgatct gcacgccgag catgaatgcc
      541 aggatgccgc cgaacgtcca aaggtagttc agattacgcg ggaccggata tacgacgaac
      601 gaggaatgaa tgagaccgcc gatcggcagc cgcttctcga gccattgcag aaatttgttc
      661 tgcggtttgt aggtcgagtg tccgctcatg attgaacctt gaatagacgt gctcagccga
      721 tctggatctt ggtgtcggaa acgaacttgt agggcggcag ctccaggttt ttcggagccg
      781 gaccctgccg gattcgcccc gcggtgtcat agaccgagcc gtggcatggg cagaaccagc
      841 cgccatattc gccctggtgg gcgagcggga tacagccgag atgcgtgcag atgccgataa
      901 ccacaagcca ctggtcatgt ccttccttga cgcgcgccga gtccggctgc gggtcgggca
      961 ggctcgcgac attgaccttt tgcgcttcct cgatttcctt cttggtgcga tggaagatga
     1021 agatcggctt cgatcgccag aacaccttga tgatctgtcc gtcggcgatc ggcgcaagat
     1081 cgacctcgat cggcgcaccc gccgcaatgg tcgaggcgtc cggattcatc tgcgcgatca
     1141 gcggaacgag tgtggctgca gcgcctaccg cgccaacggc gccagtggcg atataaagaa
     1201 agtcgcggcg cgtgtgctcc gccgaagaca cggtcgtcac gtcttaggtc ctctcctccg
     1261 gctggcttat tcttccgccc gcggcttgaa cccggaccga agtcctttgg cggcggggcg
     1321 gccccggttg cggcagcccc gaaaaggcag gacagcgcgt cggtggcgtt ctattggcac
     1381 ccttgccgtg atagcgcaag cccggaaagg cccgactaac aaggctgggc accgattttg
     1441 cgcccgcccg cgctctaaat gttacatatg cgcgcactct gcgcggctca atgggggcct
     1501 tgattgcgtg cgcgcccgcg aagattggtc gcataaatcg tttgttagac cggcctgggc
     1561 cgaggcatgg agatcacccg taccgccatc cggatcgccc tttacgagcc ggacattccg
     1621 cagaataccg gcacgattct gcggctttgc gcctgtctcg gcattgaggt gcatatcatc
     1681 gagcctgccg gtttcccggt taccgatcgc gccttccgtc gggctggcat ggactacctc
     1741 gaccaggtct ccctcacccg gcacccgtcg tttgccgctt tcgaggagtg gcgaatccac
     1801 gaacgcctgg cgctggtgtt gctgacgacc gccgccgagc gctcctacct tgagcacgga
     1861 ttcagcgacg accaggtcct gctattcgga cgcgagagcg ccggcgttcc ggaggcggtg
     1921 cacaaggccg ccgacgtgcg tctgcgcgta ccgatgcgcc ccggcatgcg gtcgatcaac
     1981 gttgcaatgg cggccgccat ggttgcgggc gaagcactgc gccaggcggg tgggttcaaa
     2041 gttgactgat cgagatcaaa caggacgcgc gcgagtgtgc tagcaaccag cgcggactat
     2101 atttccgtcc ggagccggtc atggacgcag gacaactgga agctcgcaag acacgcactc
     2161 gaacatggtt cgagacgctg cgcgacgata tctgtgccgc tttcgaaacg ctggaagatg
     2221 cgttgcccga caacgcgcct ttcgcggacc gggatgccgg ccgcttcgtg cgcacgccat
     2281 ggcaacgcac cgaccacagc ggcgagcctg gcggcggcgg cgtgatggcg ctcatgcacg
     2341 ggcgcgtctt tgaaaaagtc ggcgtgcact gttcgacggt atacggcgaa tttgccccgg
     2401 agttccgcaa ggagattccc ggcgcggggg acgatccacg cttctgggca tccggcattt
     2461 cattgatcgc gcatttgcac aatccgcatg tgccggccgt gcacatgaac acgcgtttcg
     2521 tcgtcaccag caaggcatgg tttggcggcg gcgccgatct tacgccggtg ctcgacaggc
     2581 gccgcacgca aacggatccc gacagcatcg cctttcatgc cgcaatgaaa acggcgtgcg
     2641 acttgcacgc ggagatcgcg ccctatgaca aataccggaa atggtgcgac gagtattttt
     2701 ttctcaagca ccgcaacgag tcgcgcggca tcggcggcat tttctatgac tatcttgaaa
     2761 ccgactggga agagaccttt gccttcacac aggatgttgg ccgcgccttc ttgcgcgtct
     2821 atccaggtct ggtccggaag aacttcgcga cgccctggac cgacgccgag cgcgaggagc
     2881 aattgatccg ccgcggtcgc tacgtcgaat tcaacctgct ctacgatcgc ggaacgattt
     2941 ttggcctgaa gacgggcggc aacgtggagt cgatcctgtc gtccatgcct ccgatcgtga
     3001 agtggccgta agtcgggtca gcgcaacgcc ccccacacca ggaacacacc accgagcagc
     3061 accacggcat cgaggatggc ggtatgcaca tgcagcggca tgcgctgctc cgggaaacgc
     3121 aatcagcccg atcaacagag caaaggcgat cacttgcgcg gtgagcacgc ccgcaacccc
     3181 gaacacaaga attttcacga tgccgatgac gatcgagatc gcggcatcgg tggcgatgac
     3241 cccggcacct tcgacccctg ccgccatgag caacgagagc aggatcacgc cggaccccgc
     3301 cgtgcccccc acgaccaggc catacccgaa tgaaccgagc gccagcccgc catcgccgat
     3361 tttcacgcct tggtggcgca tcagccgccg cagcggcacg ctcaggatca g
//
LOCUS       DATDHO010000040         6029 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_447088, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000040 DATDHO010000000
VERSION     DATDHO010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6029)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6029)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6029
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447088"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..857)
                     /locus_tag="VIY07_00710"
     CDS             complement(<1..857)
                     /locus_tag="VIY07_00710"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380307.1"
                     /translation="MAQKGGLTRRQYLTATGVGALAVGFGIRPAAALETVRQGYQTNM
                     WGMPTYYLLRSGALEKRGLKAEEFGVPSGNLTMQQMVARQVDLGTYAGPSFILGHDKG
                     GLIGIAVIAHVGRTTRIMARKDLGLSKIEQLKGLKVANQTGSSVGNIFVDQIAPAAGL
                     KKGDYQEVRMDVNNMVAAMAAKTVDAMVNVEPYNAIAEADGLAATLMDYWEVDKMPVL
                     MAATPEFAAKNADAIVAYLKAWLEVAGDFKDHPNKVADAIYNFYAGKGYAMSQDTFRK
                     ALATVDVDPG"
     gene            complement(871..1665)
                     /locus_tag="VIY07_00715"
     CDS             complement(871..1665)
                     /locus_tag="VIY07_00715"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380308.1"
                     /translation="MVPIEIRDVSLIYDTPGGKVPGVKEVTLNIDASEFVCIVGPSGC
                     GKSTLLNIIAGFLTPVAGEIRIDGKKVDGHGTDRGVVFQDFAQLFPWRTALGNVTFGL
                     EMKGVPKDERERIAHEQLRLVKLDKFTGSYPHHLSGGMQQRVAIARALAYNPAVLLMD
                     EPFAALDALTRDDMQRLLADVWRETRKTVIYVTHNVSEAVYLADRVIVMTPHPGTVKT
                     EIRIRLPRPRDPLSVEFLDFQKELLRHLGYETGAGERTKANGKTNA"
     gene            complement(1794..2585)
                     /locus_tag="VIY07_00720"
     CDS             complement(1794..2585)
                     /locus_tag="VIY07_00720"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6380309.1"
                     /translation="MNEDKQRQRSVLRGALAVLAAAAIYEAMARSGYFAPALLPTLPT
                     IGRTLVAMLADGSMLEHAAFTLYRVMFGFGLAVVVGLPLGILMARFQHVENFFLPLVS
                     ALMPIPSFALVPLFMLWFGIGNLTTILIVFYAATFPMMFNTWSGVRSVNPLWLRAAGA
                     MGADEHKLFWKVIIPGASPFIITGMRQAFLRSWIAVVGAEMIAASDWGLGWVIFDAKE
                     FLNTDIMLASLIVIGLIGFVFERFVFGSLERMTVLRWGMMRAAKG"
     gene            complement(2582..3400)
                     /locus_tag="VIY07_00725"
     CDS             complement(2582..3400)
                     /locus_tag="VIY07_00725"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6380310.1"
                     /translation="MQDAVTTVVVDRGPVLAERWRLVARTLFPFIVVAAIWEVIAWAG
                     IFPRRLFPPLEEVAASFVHLTITGILPRHAIETIIRLLTGFALAGVVGVTIGVLMGRS
                     RRAEDIFLPLVSIGAPIPGLAYAPLFLLWFGLGNVSSVLLVGFVSAFPIIFNSWTGVK
                     AVKEIWVRSAQAMGADDRRLFSHVILPGALPYILTGLRLGLAQAWRILVAVEMLAAVP
                     WGLGWLIFGARKFLNTDAMLAGIVVIAIIGLALEKLVFQKIENYTVVRWGMVSS"
     gene            3618..4577
                     /locus_tag="VIY07_00730"
     CDS             3618..4577
                     /locus_tag="VIY07_00730"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6380311.1"
                     /translation="MSKNAQKIGWIGTGRMGFPMAERLLKAGHDVTVWNRTRAKAEPL
                     AAKGAKIVDKLPDLASCDVVFSIVSEGKDLEQVLFGKDGVVSGGGKAPGVFVDCSTIS
                     VEESADIRKKLKARGSDYVTAPVSGNAKVIKAGRLSSVLSGPEAACKTIMPLMEVIAP
                     QGVSYVGDGELARVCKIAHNVMLGVVIENLIEITLLVNKMGVPRHAFLAFLNNGVMGS
                     MFTRYKSPALVNLDWTTTFTPELLRKDLDLGLELGREMDVPMPVTATTREVLQGHFGH
                     AMLQPDPEAYLNKDFAALMETMALAAGMKLTSENKNVPTGLES"
     gene            4840..5586
                     /locus_tag="VIY07_00735"
     CDS             4840..5586
                     /locus_tag="VIY07_00735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6380312.1"
                     /translation="MAFKLYNAPQSTCSQRVRFVLNAKGLTFEELKLNLLEGDQLKPE
                     YLKLNPNGVVPTLDHDGEIIIDSNVITEYLDEIAPPINFTPQDPVERARMRALMHFID
                     EMPAAAVRVPTFNLAFLPSFQKMESEAFAAMVASKPLRREFMFTMGQAGFPRHEMDAA
                     LARLRRTYERMDAEIEKTGGPWLLGECITLADVAVMPSLVRIHDLGLADWQDLPRVVT
                     WFDKIRAHPAYKPTFYHGSLLSERFPHLRA"
     gene            complement(5628..5858)
                     /locus_tag="VIY07_00740"
     CDS             complement(5628..5858)
                     /locus_tag="VIY07_00740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380313.1"
                     /translation="MIANPQRYVSPKERADNRARWLRFAYWVAIGIPAAVALMMFGYS
                     DQAPSWLRTATAYLDATFGFPVWWLIRTIAAP"
BASE COUNT         1298 a         1787 c         1774 g         1170 t
ORIGIN      
        1 ccaggatcca catcgactgt ggcgagcgcc ttgcggaagg tgtcctgtga catggcatag
       61 cccttgccag cataaaagtt gtagatggcg tcagccacct tgttgggatg gtccttgaaa
      121 tcacccgcga cctcgagcca ggccttgaga taagcgacaa tggcatctgc gttcttggcg
      181 gcgaattccg gcgtggcggc catcaagacc ggcatcttgt cgacctccca atagtccatg
      241 agggtggcgg cgagcccgtc ggcctcggca atggcgttgt agggctcgac gttgaccatc
      301 gcatccacgg tcttggccgc catcgcggcc accatgttgt tcacgtccat ccggacttcc
      361 tggtagtcgc ctttttttaa tcctgccgcg ggcgcgatct gatcgacaaa gatgttgcca
      421 accgatgaac cggtctggtt ggcgaccttg aggcctttga gctgctcaat cttgctcagc
      481 cccaaatcct tccgggccat gatgcgtgta gtgcggccga cgtgcgcgat gacggcaatg
      541 ccaataagtc cgcccttgtc gtggccaagg atgaaggagg ggcccgcata ggttccaagg
      601 tcgacctgcc gggccaccat ttgttgcatc gtgaggttgc ccgacggcac gccaaactcc
      661 tcggccttca gcccgcgctt ttccagggcg ccggagcgca agaggtagta ggtcggcatg
      721 ccccacatat tggtctgata gccctgtcgc acggtttcca gcgcggcggc tggccggatg
      781 ccgaagccca ccgccaacgc accaacaccg gttgccgtca ggtattgacg gcgcgtcaat
      841 ccacctttct gagccatgac ctctcctccc ttatgcattt gtcttgccgt tagcttttgt
      901 ccgctcgcct gcgccagtct catatccgag atgacgcaga agctccttct gaaaatcgag
      961 aaattcgaca ctgaggggat cgcgcggccg cggcagccga atacggatct ccgtttttac
     1021 ggtgccggga tgtggcgtca tgacgatgac ccgatcagcg agatagaccg cttcagagac
     1081 gttatgcgtc acgtagatca ctgttttgcg cgtttcccgc catacgtcag cgagcaggcg
     1141 ctgcatgtcg tcgcgggtta atgcatcgag cgccgcaaac ggctcgtcca tcaaaagaac
     1201 ggcgggattg tacgccagcg cgcgcgcgat agcgacccgc tgctgcatgc caccggaaag
     1261 gtggtgcggg tatgagccgg tgaacttgtc gagtttcacc agccgcaatt gttcgtgcgc
     1321 gatcctctca cgctcatcct ttggcacgcc tttcatctca aggccgaagg tgacgttgcc
     1381 gagtgctgtg cgccagggga aaagctgggc aaaatcctgg aatacgacgc cgcgatccgt
     1441 gccatggccg tcgaccttct tgccgtcgat ccggatctcg cctgctaccg gcgtcaggaa
     1501 gccggcgatg atattgagca gcgtggactt gccgcagccg gatggcccga cgatgcagac
     1561 gaactcggaa gcgtcgatgt tcaaagtgac ttccttgaca cccggcactt tgccccccgg
     1621 cgtgtcgtag atcagagaaa cgtcgcgaat ttcgattggg accatgttac cgattctcta
     1681 acccgttcat tcccgcgcaa gcggaaatcc agcagacatt tgaggggttg cccctgggtc
     1741 cccgcgttcg tggggacgaa cggagagctg gggtttgatt gaatccaatc attctaaccc
     1801 tttgccgcgc gcatcatgcc ccaacgcagc actgtcatgc gctcaagaga gccaaagaca
     1861 aagcgctcga acacgaagcc gatcaggccg atgacgatga gcgacgctag catgatgtcg
     1921 gtattgagga attccttggc atcgaaaatg acccaaccca gcccccagtc agaggcggcg
     1981 atcatctcgg cgccgaccac ggcgatccag gagcgcagga aagcttgccg catgcctgtg
     2041 ataatgaacg gtgacgcgcc cggaatgatc accttccaga acagtttatg ctcgtcggca
     2101 cccatggcac cggcagcgcg cagccacagc ggattgacgg agcgcacgcc ggaccaggtg
     2161 ttgaacatca tcgggaaggt cgcggcatag aacacgatca ggatcgtggt cagattgccg
     2221 atgccgaacc agagcatgaa cagcggcacc agcgcgaagg aggggatcgg catcagcgca
     2281 ctgacaagcg gcagaaagaa attctccacg tgctgaaagc gcgccatcag aattcctagc
     2341 ggcaagccga ccacgaccgc gagtccgaaa ccgaacatca cccggtaaag cgtaaatgcg
     2401 gcatgctcga gcatgctgcc gtcggcaagc atcgccacga gtgtgcgccc aatcgtcggc
     2461 agcgtgggca gcaacgccgg cgcgaagtac ccgctgcgcg ccatcgcctc atagatcgcc
     2521 gctgccgcga gcaccgcaag tgcaccccgc aggacagaac gttgacgctg tttatcttca
     2581 ttcatgacga gaccatgccc cagcgtacaa ccgtgtaatt ctcgattttt tgaaacacga
     2641 gcttctccag cgccagaccg ataatcgcga tcaccacgat gccggcaagc attgcatcag
     2701 tgttgaggaa cttgcgggcg ccgaagatga gccagccgag gccccatggc accgcagcca
     2761 gcatttcgac cgcgaccagg atacgccacg cctgcgccag accgagccgc aagcccgtga
     2821 gaatataggg caatgcgccc ggcaagatga cgtggctgaa caatcgacgg tcgtcggcgc
     2881 ccatggcctg cgcggagcga acccatattt ccttgaccgc tttcaccccg gtccagctgt
     2941 tgaagatgat tggaaacgct gaaacgaagc cgaccaggag caccgacgag acattgccga
     3001 gaccgaacca gagcagaaac agcggcgcgt aggcgagccc cgggatgggg gctccgatcg
     3061 ataccagcgg caggaaaata tcttcggcgc ggcgcgatcg gcccatcagc acgccgattg
     3121 tcacgccgac gacgccggct agcgcaaatc ccgtgagcag gcgaatgatc gtttcgatag
     3181 cgtgacgagg caaaataccg gttatcgtca ggtgcacgaa tgaggctgcc acttcttcaa
     3241 gcggcggaaa cagacggcgt ggaaagattc cggcccaggc aatgacttcc cagattgcgg
     3301 caacgacgat gaacggaaac agcgtgcgcg ccacaagccg ccatcgctcg gccagcacag
     3361 ggccgcgatc gacgactacg gtggtgacgg catcctgcat cggttgcccg catccctccc
     3421 ggaagacctg taagcctttg aggctttttc tgaccctgcg gccattccgg gccgaaggat
     3481 agtgcgcttt aaactctgac cacaagaacg cgcaccaggc gaattgcggc atgcactgcc
     3541 actggcgcaa ccgccacgga acgggtaaag ccccggcacg cgcacacatc gtgccagctt
     3601 gaacggagag tttcgtgatg tcgaagaacg cacagaagat cggctggatc ggaaccggcc
     3661 gcatgggctt tcccatggcg gaacgcctgc tcaaggccgg gcacgatgtg acggtttgga
     3721 atcgcactcg ggcaaaagcc gaaccactgg ccgccaaggg tgcaaagatt gtcgacaagc
     3781 ttccggattt ggcctcgtgc gatgtcgtct tttcgatcgt gtccgaaggc aaggacctgg
     3841 agcaggtatt gtttggaaag gacggcgtcg tatcgggcgg aggcaaagcg ccgggcgtgt
     3901 tcgtcgactg ctccaccatt tcggttgagg agtccgccga catacgaaag aaactgaagg
     3961 cgcgcggttc cgactatgtc accgcgcctg tgtccggcaa cgccaaggtc atcaaggctg
     4021 gccggctttc gtcggtgtta tcggggcccg aggcggcctg caaaacgata atgccgctca
     4081 tggaggtgat agcgccgcaa ggcgtttcct atgtgggcga cggcgagctc gcccgggtgt
     4141 gcaagatcgc tcacaatgtc atgctcggcg tggtgatcga aaatctcatc gagatcactc
     4201 tgctggtgaa caagatgggc gtcccgcgcc acgcctttct cgcttttctc aataacggtg
     4261 tgatgggctc gatgttcacg cgttataaat cgccggcgct ggtcaacctc gactggacca
     4321 cgaccttcac gccggaattg ttgcgcaagg atctcgatct cggtctcgag ctgggtcgcg
     4381 agatggacgt gccaatgcca gtgacggcga cgactcgcga agtgctgcaa ggacattttg
     4441 gccacgcgat gctgcagccg gatccggaag cctatctgaa caaggatttc gccgcgctga
     4501 tggagacgat ggctctcgct gccggcatga agctcacgtc ggagaacaag aacgttccga
     4561 ccggattgga gagttgagcg cgctgcgtgt acggcgtgtt cgtctcatcg gccaaataaa
     4621 aaaggggccc cttgcggggc cctgtgtgca taaggtggag gattcacgcc gccgtctaag
     4681 cctgaaggga ggaaaacggc ggctgcgcac gtctctactc aaccgatccc gcgccgttat
     4741 cacaagtaaa ttggccgtaa attttatagt ggatatgcga ggaacaaatg tcacatttcc
     4801 tcgttcgttc gaacgtcaca ttactgaacg gagttcaaca tggctttcaa gctgtacaat
     4861 gctccgcaat cgacgtgcag ccagcgtgtt cgctttgttc tcaatgccaa agggctgacg
     4921 ttcgaggagt taaaactcaa cttgctcgag ggcgaccagc tcaagcctga atacctcaaa
     4981 ctcaacccca atggcgttgt gccgacgctc gaccacgatg gcgaaatcat catcgactcc
     5041 aatgtcatca ccgaatacct cgacgaaata gcgccgccca tcaatttcac gccgcaggat
     5101 cccgtcgagc gcgcacgcat gcgcgcgctg atgcatttca ttgacgagat gccggcggcc
     5161 gcggttcgcg tgccgacctt caacctggct tttctgccga gctttcaaaa aatggagagc
     5221 gaagccttcg cggcaatggt ggcaagcaaa ccgctgcgcc gtgaatttat gttcaccatg
     5281 ggacaggccg gctttccccg gcacgaaatg gatgccgctc tggcgcgact gcgccgtact
     5341 tacgagcgca tggacgcgga gattgaaaag accggcggcc cctggttgct tggtgagtgc
     5401 attaccctgg ccgatgttgc cgtgatgccg tcactcgtgc gcatacacga tctcggcctt
     5461 gcggattggc aggatctgcc gcgcgtcgtc acgtggttcg acaaaattcg cgcgcatccg
     5521 gcctacaagc cgacgttcta tcatggctcg ttgctgagcg aacgattccc gcatttgcgg
     5581 gcatagaagc acgcggcgga aactttttag actgctggct tcaattgtta cggtgctgct
     5641 attgtcctga taagccacca caccggaaag ccaaaggttg cgtccaggta ggcggttgcg
     5701 gtgcgcaacc aactcggcgc ctgatcgctg taaccgaaca tcattaatgc aacggctgcc
     5761 gggatgccaa tagcgaccca ataggcaaac cgcagccagc gcgctcgatt atccgcgcgt
     5821 tccttcggtg agacgtatcg ttgcggattg gcgatcatga gtaacatcgt aggacgcgag
     5881 gtgcgtccca cgatgttact catgatcgcc aatccgcacc gatacgtctc accgaaggaa
     5941 cgcgcggata ctcgagcgcg ctggctgcgg tttgcctatt gggtcgctat tggcatcccg
     6001 gcaaccgttg cattgatgat gttcggtta
//
LOCUS       DATDHO010000041         2313 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_100822, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000041 DATDHO010000000
VERSION     DATDHO010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100822"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(246..413)
                     /locus_tag="VIY07_00745"
     CDS             complement(246..413)
                     /locus_tag="VIY07_00745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380314.1"
                     /translation="MRILLIAACLATLVIAGWSNYSAVADAKLRGDFTINPTAMMATT
                     GQLPAEQYEAF"
     gene            707..2035
                     /locus_tag="VIY07_00750"
     CDS             707..2035
                     /locus_tag="VIY07_00750"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEY6380315.1"
                     /translation="MDQSKQQPSSAEILTFPHMSRKDEQLLQTVLNNMSQGVLMFDSQ
                     TRLIFCNQRYIELYGLSPDIVKPGCLLRDLLRHRIERGNFSGDPDEYVARLADGIAEG
                     KTFNHIVNLPDGRAFSVVNKPVAGGGWLATHEDVTERQRSEERIAHMARHDALTDLPN
                     RILLLEQLNHEIKRVKRGECLAVLCLDLDQFKSVNDALGHHIGDELLKLVGERLRGCT
                     RELDIVARMGGDEFAIIMTQMEQAQDAATLSKRIRDSVVRPYQVEGHQIVTDISIGIS
                     VAPMDAVESDELLRNADMALYDAKADGRGTFRFFEPEMNTRMKVRRELEMDLRKALAG
                     EQFELHYQPLVVLETNEVNGFEALLRWNHPVRGLVSPADFIPIAEETGLIVPLGEWVL
                     KTACSESRQLARAYQGRRQSFAGAAELPQPRQHGHDSACGIRHAAAETAA"
     gene            1956..>2313
                     /locus_tag="VIY07_00755"
     CDS             1956..>2313
                     /locus_tag="VIY07_00755"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY6380316.1"
                     /translation="MNCRNLVNMVTTALAESGMPPQKLQLEITETVLLQNTFTTLATL
                     HELRKMGVQIALDDFGTGYSSLSYLRSFPFDKIKIDRSFIQDLSNGSEPLAIVNAVAG
                     LAKCLNMTSTAEGVETQ"
BASE COUNT          480 a          682 c          675 g          476 t
ORIGIN      
        1 tcgccgctgg tcccggctgg ggatattacg gtccctacgg ctacggcccc tactacggcg
       61 cctatggcta cggcggcgac tgcgcaatgc gccggcgttg ggtcgtaaac cgctatggcc
      121 attcgcgtgt tgcgttgggt ccgcgtctgt tactgagcgg tcgtacatag acaaattcga
      181 ggaaagcacg cggaaagcaa acggccgggc aaaagcccgg ccgttgtttg attgactcga
      241 atggttcaga aggcctcgta ttgctcagcc ggcagctgac cggttgttgc catcatggcg
      301 gtcgggttga tcgtgaagtc tccgcgcaat ttcgcgtctg cgaccgccga atagttcgac
      361 cagccggcga tgaccaaagt tgccagacaa gctgcgatca ggaggatgcg catttgactt
      421 ctcccttatc tccggagcgt gagcttttcc ggtagcgcac gcgtttcgtg atggtggaat
      481 acgcccgccc gtccgccgtg gctgtgttcg ccgtcacaaa aaagcggatt taattattgc
      541 accccaatcg gttgcgccga tgcggaaggt atggttttcc tcccgcggat tcgccgatta
      601 actccctgtt tttaactaaa accgacgcta attccctaat gggttccaca tagagcgccc
      661 gtaaggtcga gctccgacca ggataccgtt tcgtccgggg ctcagcatgg atcaatcgaa
      721 acagcagcct tcaagcgccg agattttgac ctttccgcac atgtcgcgga aggacgagca
      781 gttattgcag accgtgctca acaacatgtc gcaaggcgtg ctgatgttcg attcgcaaac
      841 acgcctaata ttttgcaacc aacgttatat cgaattgtat ggactctctc cggacatcgt
      901 aaagccgggc tgcctgctgc gcgatctgct ccggcaccga atcgagcgcg gcaacttctc
      961 gggcgatccg gacgaatatg tggcccgact ggcggatggc atcgccgagg gaaaaacatt
     1021 caaccacatc gtgaatttgc cggatgggcg ggctttttcg gtcgtcaaca agccggttgc
     1081 gggcggcggc tggcttgcca cccacgaaga cgtgaccgag cgtcaacgct cggaagaacg
     1141 cattgcgcac atggcgcgtc acgatgcgct gacggatctg ccaaaccgca ttctcctgct
     1201 tgagcagctc aaccatgaga tcaagcgggt caagcgcggc gaatgcctgg cggtgctgtg
     1261 ccttgatctc gaccagttca agagcgtcaa cgacgcgctg ggtcaccaca tcggcgatga
     1321 gctgctgaag cttgtcggcg aacgcttgcg cggctgcacc cgggaactcg acatcgttgc
     1381 ccgcatgggc ggtgacgagt tcgccatcat catgacccag atggagcagg cgcaggatgc
     1441 cgcaacgctg tcaaagcgaa ttcgcgattc tgtcgtcagg ccgtaccagg tcgaggggca
     1501 tcagatcgta accgacatca gcatcggaat atcggttgca ccgatggacg cggtcgagtc
     1561 ggacgagctt ctgagaaacg cggacatggc gctttatgac gccaaggccg acgggcgcgg
     1621 caccttccgg ttcttcgagc ccgaaatgaa tacgcgcatg aaggtgcgcc gcgagcttga
     1681 aatggatctt cgcaaggcac tcgccggcga gcagttcgag ctccactacc agccgctcgt
     1741 cgtgctggag acgaacgagg tcaatggttt cgaggcgctg ctgcgctgga atcacccggt
     1801 acgcgggctg gtgtctccgg ccgacttcat tccgatcgcc gaagaaaccg gcctcattgt
     1861 tccgcttggg gaatgggttc tcaagacggc ctgttccgaa agccgtcaac tggcccgagc
     1921 atatcaaggt cgccgtcaat ctttcgccgg cgcagctgaa ctgccgcaac ctcgtcaaca
     1981 tggtcacgac agcgcttgcg gaatccggca tgccgccgca gaaactgcag cttgaaatca
     2041 ccgaaacggt gctgctgcag aataccttca cgacgctcgc cacactccac gagctgcgta
     2101 agatgggcgt gcagatcgcg cttgacgatt tcggaacggg ttattcctcg ctcagctatc
     2161 tgcgcagctt ccccttcgac aagatcaaga tcgaccgctc gtttattcag gatctttcca
     2221 atggctccga gccgttggcg attgtgaacg ccgtcgccgg cctcgcgaaa tgcctcaaca
     2281 tgacttcgac cgccgaaggc gtcgaaacac agc
//
LOCUS       DATDHO010000042         2528 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_100892, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000042 DATDHO010000000
VERSION     DATDHO010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_100892"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..903
                     /locus_tag="VIY07_00760"
     CDS             <1..903
                     /locus_tag="VIY07_00760"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY6380317.1"
                     /translation="LGDACLKRFGQPYGVTHRADIHGTFLKACQGSNLITLETSRRVD
                     SFTDHGDHVAVTLNNGETVEGRALIGCDGMWSKIRETLIGDGKPRVSGHIAYRAVLKR
                     EDVPKDLWRPDVVLWAGPRTHFVHYPLRRGELYNLVAVFHSDQYQEGWNAEGSKEVMW
                     QHFKMQVPQVLRMLERIETWRMWVLCDREPVKHWSSGRVTLLGDAAHPMLQYLAQGAC
                     MATEDAVVLAEKVAASPDDPAKAFKAYEDERYLRTGRTQIMARVYGEFYHARGVAAEL
                     RDLALSPRTTEQSYDGIAWLYGGP"
     gene            complement(996..2162)
                     /locus_tag="VIY07_00765"
     CDS             complement(996..2162)
                     /locus_tag="VIY07_00765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007775891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY6380318.1"
                     /translation="MSKKKLSIAVVGAGMGGLAVAATLRRVGVDVQVYEQAARFARIG
                     AGIQMMPNSMKVLRGIGIEQRLRETSFAPYSHLNRDAYTGELTRELPMPEGLYHAPYL
                     CMHRADLHDALASAVPERIVHLGKKLIGLDQVDGQVTLRFEDGTRASADAVVGADGVH
                     SVVRDIVVGPDEPIHKGRIAYRAVFPASLMGGFDIGPSRTKWWGTDRHIVIYYTTKAK
                     SEVYFVTSVPEPAEWLTRESWSAKGDVRELRQAYEGFHPDVRNVLEACPDCHKWAILE
                     REPLPRWSDGRVVLLGDAAHPMTPYMAQGAATSIEDAAILARCLAAVKGEDVEGAFRR
                     YETHRKPRTSVVQAISSANTWMREGDGDTSWLYGYDAWNANLDQPAAHPRAQAA"
     gene            complement(2159..>2528)
                     /locus_tag="VIY07_00770"
     CDS             complement(2159..>2528)
                     /locus_tag="VIY07_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380319.1"
                     /translation="RFLLLSWFSALMLLVGFIALSTVLGSLVPREVLNGSSGYLPALA
                     ALIILGSMLRRHKVGQILLVAAGLFFVSLTFRIVDLDVCAAWPLGTHFLWHLLNAALL
                     YAVIWAAVEERQRPLAQELR"
BASE COUNT          515 a          794 c          758 g          461 t
ORIGIN      
        1 cttggtgatg catgcctgaa aaggtttggc cagccctacg gcgtcactca ccgagcggat
       61 atccacggca cgttcctgaa ggcctgccaa ggcagcaacc tgatcacgct tgagaccagc
      121 cgccgtgtcg actcctttac cgatcatggc gaccacgtcg cggtcactct taacaatgga
      181 gaaacggtcg aaggccgcgc cttgatcggc tgcgacggca tgtggtcgaa gatccgcgag
      241 accttgatcg gtgacggcaa gccgcgggta tcgggccaca ttgcctatcg tgcggtgctc
      301 aagcgcgagg acgtccccaa agatctctgg cgtcccgacg tcgtcctgtg ggccggaccg
      361 cgtacccatt tcgtgcacta tcccctgcgg cgtggcgagc tctacaacct ggtcgcggtt
      421 ttccattccg atcaatatca ggaaggctgg aatgccgaag gcagcaagga ggtcatgtgg
      481 cagcatttca agatgcaggt gccgcaggtc ctacgcatgc tcgagcgcat cgaaacctgg
      541 cgcatgtggg tgttatgcga ccgcgagcct gtcaagcact ggtcgtctgg ccgcgtgacg
      601 cttttgggcg atgccgcgca tccgatgctg cagtacctcg cgcagggcgc ctgcatggca
      661 accgaagacg cggtggtgct cgcggagaaa gtggcggctt cgcccgatga cccggccaag
      721 gctttcaagg cctacgaaga tgagcgatat ctccgaaccg ggcgcacgca gatcatggcg
      781 cgggtctatg gcgaattcta tcacgcgcgc ggcgtcgccg ccgagctgcg cgatctcgca
      841 ctgtcgccgc ggactacgga acagagctac gatggcattg cctggctgta tggcgggccg
      901 tagccatccc tccgttcctt cccgcgcaac cggaaatcca acaattcgtc acactgcgtc
      961 cccgctttcg ggggacgaac gtaggaactg caggattacg ccgcctgcgc gcgtggatgc
     1021 gcggccggct gatcgaggtt ggcgttccag gcgtcatagc catagagcca gctggtgtcg
     1081 ccgtcgcctt cgcgcatcca agtattcgcg ctcgagatcg cctgcactac ggatgtgcga
     1141 ggcttgcgat gcgtctcgta acgcctgaag gctccctcga cgtcctcgcc tttcacggca
     1201 gcaagacagc gcgcaagaat ggcggcatcc tcgattgacg tggcggcgcc ctgggccatg
     1261 tatggtgtca tcggatgggc ggcgtcgccg agcagcacca cgcgtccgtc gctccaccgc
     1321 ggcaacggct cgcgctcaag gattgcccat ttatgacagt ccggacacgc ctccagaaca
     1381 ttgcgtacat ccggatggaa gccttcgtag gcctgacgca actccctcac atctcccttg
     1441 gccgaccacg attcacgcgt cagccactcg gccggctcgg gcacactggt gacgaagtaa
     1501 acctcgctct tcgccttcgt cgtgtaatag atcacgatgt gacggtcagt cccccaccat
     1561 ttcgtacgcg acgggccgat atcgaaccca cccatcaagc tggcaggaaa gaccgcgcga
     1621 taggcgatgc ggcctttgtg gatcggttca tcgggcccta ccacaatgtc acgtaccacc
     1681 gagtggacgc cgtccgcgcc gaccacagca tccgccgagg cgcgggtgcc gtcctcgaaa
     1741 cgcaaggtca cttgaccatc gacctgatct agaccgatca gtttttttcc aagatggacg
     1801 atgcgctccg gaaccgcgga ggcgagcgcg tcatgcaagt cggcgcgatg catgcagaga
     1861 taaggtgcat ggtagagacc ttctggcatc ggaagttcgc gcgtgagctc accggtatag
     1921 gcgtcccggt tgagatgcga atagggggca aaggaggttt cacgcagtcg ttgctcgatc
     1981 ccgatgcctc gcagcacctt cattgaattg ggcatcatct ggatgccggc accgatgcgc
     2041 gcgaaccgcg ccgcctgttc gtagacctga acatcaactc cgacgcgccg cagcgttgcg
     2101 gcaactgcca gaccccccat gccggcgccg accacagcga ttgaaagttt ctttttgctc
     2161 atcgcaactc ctgagcgagc ggtcgctggc gttcctcaac ggcggcccag attacggcgt
     2221 aaagtaaagc cgcattgaga aggtgccaaa ggaaatgggt tcctagcggc cacgccgcgc
     2281 acacgtccaa gtctacgata cggaatgtca gcgaaacaaa gaagagtccc gctgccacga
     2341 gcaatatctg ccccacctta tgccggcgca gcatcgatcc gaggatgatc agcgctgcga
     2401 gcgcaggaag atacccggag gatccgttca gcacttcgcg cggtacaagg gagccgagaa
     2461 ctgtcgacag cgcgatgaac ccgacgagca gcatcagtgc cgagaaccac gacaacaaca
     2521 gaaatcgg
//
LOCUS       DATDHO010000043         3117 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_447260, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000043 DATDHO010000000
VERSION     DATDHO010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3117
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447260"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..567
                     /locus_tag="VIY07_00775"
     CDS             <1..567
                     /locus_tag="VIY07_00775"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380320.1"
                     /translation="LRGLKLRTLGLGGEVYRRLGVTPQTTPPAEILVSLQSGVIDGAE
                     FVGPGTDIALGLYRVAPFYYYPGFNKPNGTGECIIALKAWNALSDELKAVVAHACATE
                     ANYALAEMERLNATALEALVNEHKVKLAVFPEDVISAARKQANDVLGELAGRSAMTGK
                     VHASYVAFRERTATWSRVSIESVLRARG"
     gene            669..2165
                     /locus_tag="VIY07_00780"
     CDS             669..2165
                     /locus_tag="VIY07_00780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008138512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEY6380321.1"
                     /translation="MRRKLSLPLRLAILVAGTILPLIGFSAAIVYQHYRQDQQDAFGR
                     VLQVTRSIQQVLDREMQGIVSGLTVLAGSDSLARGDFDAFRGRVQAFLAQFPGRASVI
                     VGDREGRQVFNSSTEPGVLLPPRTSREDRDAVFKTRKPAFSELFVGSVSKRPIVTVTV
                     PVLRGGDVIYDLSFDPPLEIFQRIIEQQKPSDDWTISIFDGKGVNFARVPNPETTIGM
                     KASPSLSAVMFSAREGQARTVSLEGVPLLTAFVRSGLTGWIPAAGIAEKTLTAPAVRT
                     FILTGAIGLGMLAIGLAFAIRMATTIARAEALHELLINEVNHRVKNTLATVQSLSSQT
                     FRSSADAIARGKFDGRLGSLGRTYDVLSAKKWEGADIKDVIDATLEPFASADPDRIRV
                     AGPPVQMSARSVVMLSMVLHELATNASKYGALSAPNGRVTVDWLNKPLDRVELYWRES
                     GGPVVEKPQRAGFGSTLIEKGFPAQIGGSALLQFDANGLRCTLEFPSR"
     gene            complement(2197..>3117)
                     /locus_tag="VIY07_00785"
     CDS             complement(2197..>3117)
                     /locus_tag="VIY07_00785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HEY6380322.1"
                     /translation="GLGCEVFQIDRMKEEYGMVEGDHFQTMTIQATGGTKKTVDQGVQ
                     RIKEMLPVAARARRETRPASEVVLALQCGGSDGYSGITANPALGAAVDLLVKNGGTAV
                     LSETPEIYGAEHLLTRRAVNRAVGEKLVERIRWWEDYTKRNGGEMNNNPAPGNKAGGL
                     TTILEKSLGAAAKGGNTTLRAVYEYAEPVKEKGFVFMDTPGYDPVAATGQVAGGCNVM
                     CFTTGRGSAFGCKPTPSIKLATNTEMYRRMTDDMDINCGDVLDGISIEAKGQEIFDKM
                     LEVASGRHTKSEDLGYGELEFVPWQIGAVM"
BASE COUNT          560 a          953 c          946 g          658 t
ORIGIN      
        1 ctgcgcgggc taaagttgcg aacacttggt cttggcggcg aggtttatcg acggctcggt
       61 gtcaccccgc agacgactcc tccggccgag attctggtga gcctgcaatc gggcgtgatc
      121 gatggcgcag aattcgttgg ccccggaacc gacatcgcgc tcgggctcta tcgcgtggcg
      181 ccattctatt actaccccgg gttcaacaag ccgaacggca ccggcgaatg catcatcgcg
      241 ctcaaggcct ggaacgcgct gtccgacgaa ctcaaggccg tggttgccca tgcctgcgcg
      301 accgaggcga attacgcgct ggccgagatg gagcggctca acgccaccgc gcttgaagca
      361 cttgtgaacg agcacaaggt caagctcgcc gtgttcccgg aagacgtgat cagcgccgcg
      421 cgcaagcagg caaacgatgt ccttggcgag ctggcggggc gcagcgcgat gaccggcaag
      481 gtccatgcat catatgttgc atttcgcgaa cgcacggcga cctggtcgcg ggtttcgatc
      541 gaatcggtgt tgcgggcgag gggatgagcc ccgcacatca gatgataatc ggagttccag
      601 tcggtttgct tgctcgcgca aggcgttatg ctagacattg gagtgtccca gaggcttagc
      661 cagcattcat gcgccgcaag ttgtcgcttc cgttgcggct agcaatattg gttgccggca
      721 caattttgcc gctgatcgga ttttccgccg ccattgtcta tcagcactac cgacaggatc
      781 agcaagacgc cttcggccgc gtgctgcagg tcacgcgcag tattcagcaa gtccttgatc
      841 gcgagatgca aggcattgtt tccggcctca ccgttctcgc cggctcggat tcgctggcgc
      901 gcggcgattt cgacgctttc cgtggcaggg tgcaggcatt tttggcgcaa ttcccgggtc
      961 gcgcatcggt catcgttggc gatcgggagg ggcgccaggt tttcaattcc agcacggagc
     1021 ccggcgtgct tctgcccccg cgcacgagtc gcgaagaccg cgatgcggtt ttcaaaacac
     1081 gcaagccggc tttttcggag ctgtttgttg gttctgtctc caagcgtccc atcgtgaccg
     1141 tgacggtccc tgtgttgcgc ggtggcgacg tcatctatga tctgtcattc gatccgccgc
     1201 ttgagatctt tcagcgcatc atcgagcagc agaagccgag cgacgactgg acaatttcaa
     1261 ttttcgacgg aaagggcgtc aattttgccc gtgtgccaaa tcccgagacc acgatcggca
     1321 tgaaggcgtc tcccagcctg tccgcggtca tgttcagtgc ccgcgaagga caggcgcgca
     1381 cggtgtcgct ggaaggcgtg ccccttctca ccgcatttgt tcggtccgga ctgaccggat
     1441 ggattccagc cgcaggcatt gcagagaaga cgctgaccgc ccccgccgtc cggaccttca
     1501 tcctcaccgg agcaatcggt ctaggcatgc tcgccatcgg actcgcattc gcgatccgca
     1561 tggcaacgac gattgcccgc gccgaagctt tgcacgagct cttgatcaac gaagtcaatc
     1621 accgcgtgaa gaacacgctg gcgaccgttc agtccctttc gtcccagaca ttccgcagca
     1681 gcgccgacgc catcgcgcgc ggcaagttcg atggacggct gggctcgctt ggccggacct
     1741 acgacgtgct gagcgccaag aaatgggaag gcgctgatat aaaggacgtc atcgacgcaa
     1801 cgctggagcc gtttgcgagc gcggatcccg accgcattcg cgttgctggc ccgcccgttc
     1861 agatgtcagc gcgctcggtg gtgatgctgt cgatggttct ccacgagctc gcgaccaatg
     1921 cctcgaagta tggagcgctt tccgcgccca acggccgggt gaccgtggac tggttgaaca
     1981 agcccctcga cagagtggag ctgtattggc gggagtctgg tgggcccgtc gtcgaaaagc
     2041 cccagcgtgc cggcttcgga tcgacgctga tcgagaaagg atttccggct cagatcggag
     2101 gaagcgcgct cctgcaattt gatgcgaacg gactacggtg cacgctggag tttccctctc
     2161 gttgagcaag atgacgactc gtatcgggcg cggtgattac atcaccgccc caatttgcca
     2221 gggcacgaat tcgagttcgc cgtagccaag gtcttcagat ttcgtgtgcc ggcctgaagc
     2281 gacctcgagc atcttgtcga atatttcctg acctttcgcc tcgatcgaga tgccgtccag
     2341 cacatcgccg cagttgatgt ccatgtcgtc ggtcatgcgc cgatacatct cggtattggt
     2401 cgcgagcttg atcgagggcg taggcttgca gccgaacgcg gagccgcgcc cggtggtgaa
     2461 gcacatgaca ttgcagccgc cggccacctg gccggtcgct gcgaccgggt cgtatccggg
     2521 cgtatccatg aagacgaagc ctttttcctt gacgggttcg gcgtattcgt agacagcgcg
     2581 caaagttgtg ttgccgccct tggccgcagc ccccaatgat ttctccagga tggtggtgag
     2641 cccgccggcc ttgttgcccg gcgcgggatt gttgttcatc tcaccgccat ttctttttgt
     2701 gtagtcctcc caccagcgaa tccgctcgac cagtttttcg ccgacggcgc gattgacggc
     2761 gcgccgtgtg agcagatgtt cggccccata gatttccggc gtttccgaaa gcacggccgt
     2821 tccgccattc ttgaccaaga gatcgaccgc ggcacccaga gccggatttg cggtgatgcc
     2881 ggaatagccg tcggagccgc cgcattgcag cgccagcacg acctccgaag cggggcgcgt
     2941 ttcccgccgg gcgcgcgcgg caacaggaag catctccttg atgcgctgga cgccctggtc
     3001 gacggttttc ttcgttccgc cggtcgcctg aatagtcata gtctggaagt gatcgccttc
     3061 gaccattccg tattcttcct tcatacggtc gatctgaaat acctcgcagc caagtcc
//
LOCUS       DATDHO010000044         1896 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_348625, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000044 DATDHO010000000
VERSION     DATDHO010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348625"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..221
                     /locus_tag="VIY07_00790"
     CDS             <1..221
                     /locus_tag="VIY07_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380323.1"
                     /translation="IITAQIVALRPVFAGRPFLLGTYGKTPGGRAAGGFWLVETASSR
                     SGLEVAMDSERDRDVVLVLDRVKAARTR"
     gene            complement(229..1573)
                     /locus_tag="VIY07_00795"
                     /pseudo
     CDS             complement(229..1573)
                     /locus_tag="VIY07_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084757.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          352 a          576 c          575 g          393 t
ORIGIN      
        1 tgatcatcac tgcacagata gtggcgctcc gaccagtttt cgctggccga ccgtttctgc
       61 ttggaaccta tggaaagacc cccggcggga gggccgccgg gggtttctgg ttggttgaga
      121 ctgcttcaag ccgatcaggg cttgaagtcg cgatggactc ggaacgtgac cgcgacgttg
      181 tcctggtcct cgatcgtgta aaagccgcgc ggacgaggta gtcgcccgtt aagaagccga
      241 cttgacggct ggttggatgg cgagggtccg gactagggcg agaaggacga cgcgcaaaat
      301 catcctcagc caggcgagga ggaggcgaag gttgtaaccg acggcgctga ggatggcatt
      361 ggcggcgtcg ccggcgcggc ctttgagata gcaacggccg agatgacctt ccgccttcat
      421 gtggccgatc accgcctcga tggcggagcg acgtctgagc tcgcgtttga tgcggccgaa
      481 cacccgcgct tttggcctga gatgaagacg cggcgcgggt ttgcggcatc gtggccacga
      541 tatcccttgt cgacataggc gcgctcgatc tcccggccgg tgagctctga gtgtcttcga
      601 ggatgtcgtg caacgtatga ccgtcgtaag gattgccggg catcgccctg gcgtgcagca
      661 cgaattggcc acccggagct cgggcattgg tggtgacaat ggaagctttc acaccgaact
      721 cgtaaggcgc gctagccttg cccctgccga tgcactccac ctctggggcg tggaaggaat
      781 acagcttcca gccacgctga cgctgctgct gcgagcggat ctggtcggcg cgagacagcg
      841 gccaggaaaa tgccgcctcg agcggcgcgt cgcctgcgat cctgcgccgg atgtcgcgga
      901 tgatccggcc gagccggatg cgcaaaatgc gcagctcgcg atggtggcgg ttgaactgtt
      961 tggcatgcgc atagcgtccc gccatcatcg ccgcgcgctt ggcgatgcgc aggtaggact
     1021 gccgcagccg caccccgtgc ttcttggcca gccgggtcag cccattgatc gccgcgtgca
     1081 gcagcttcgc gtcggtcggg aaggtgacgt tcttgggctg cacggtggta tcgaccgtga
     1141 cccgcgccaa atccttcgtc cgcagcgcgc cgctcgcatg cgccacccgc aggctctcgg
     1201 ccagaagcag ttccagcttg tcgccaagcc gcttgcgcca atggctcagg tccgagcgtt
     1261 cgtgccgaaa gtcgtgccgg aagaactcct ctccggtgaa gtgctggaag tacgggtcat
     1321 agacccagcg ttggcacacg ccttcgtcgg ataggccata gatgtgcttg agcaacaaaa
     1381 gcccgatcac aaatcgcgtc tcgatcccgg ggcggccctg atcgctgtac agcggcgcga
     1441 tctccccgtc gatgaactcc cagtcaatct tgtccgccag ctgcaccagc tcgtgcttca
     1501 tattgatgat ctggtctagc cgcgtccgga acaaatcccc cgatcccgtc gtctcgtgcc
     1561 tctttggtcg catcattccc tccgatgcgg cgaccgaatc acgatcgtcg attcgaggga
     1621 attgcaaacc gaaattgcaa gctttcaggg cctccgaccc tgaaaccttg caatctcaaa
     1681 tccgcaaaat cgtcagaaaa cgactctcgc tcagtcgctt agagcttgtt cacggctgac
     1741 ttattaacct cttatctggg ctactatcct tcgtttctgt tctttggtcc gttagcttcc
     1801 gaagatcaag aactaccagt gaaccctgag aaaatactgt cgcttctttt atttgacgag
     1861 gtatctcgaa ccctgtggct cgccctcgct cgacag
//
LOCUS       DATDHO010000045         1654 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_348766, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000045 DATDHO010000000
VERSION     DATDHO010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348766"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..1134)
                     /locus_tag="VIY07_00800"
                     /pseudo
     CDS             complement(63..1134)
                     /locus_tag="VIY07_00800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580512.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
BASE COUNT          336 a          505 c          500 g          313 t
ORIGIN      
        1 cgatcatatg cacctgatcg acccctcgaa cggtgaagta atctagcgcg actctttctt
       61 gtctacgctt tcgccgcagc cggcgcccat agtttcggtc ccgcccgttg atattgtggc
      121 ggtcgatgca cctcggcgcc gagcgtcttg gccgcgtgcc agccccaatg ggggtcgtcg
      181 agaaaactgc gtgccatcga caccaggtcg acctgcccgg tcgcgacgat ctcctcggca
      241 tgctgaggct tcacaatcaa accgactgtg cgggttggaa tgccagcttc ccgctttacc
      301 cgcgcagcga taggcacgtt gtagcccggc tcggtgggat tgcggatgtc cgcggcgacg
      361 ccgccggatg agatgcagat aaaatcgatt ccctcgcctt tcagggccct ggcaatcgcc
      421 acggcgtcgt cgggagtaag tccgccttct ctccaatcac tgccggtgat gcgcgcgccg
      481 agcggcaccg tccttggcac gactgcgcgc acggcgcgcg caatcgacag cggaaaacgc
      541 atgcgattct cgaatgaacc gccatattgg tcggtccgct tgttggaaat cggagacatg
      601 aaaccatggg cgaggtaacc gtgcgccatg tggagttcgt tgggcggaag agatgaaagc
      661 cgcacgaact cgctccatat ccgtttcggt gacttcgcgc ggcgtgtgcc acccctcgcc
      721 gaacggaatg ggcgaggacg cgattgtagg ccatggatgt tcttccggct ttaagggggc
      781 ggcgccctcc cacgggcgtt gcgccgagcc cttgcggccg gaatgggcaa tctggatgcc
      841 gaacttggcg ctgcccatgc ggcgcgcctg cgagacaacc cgagcaagcg ctgcttcatt
      901 gtcatcggag tacaagccaa ggcagccgtg cgtgatgcgg ccatgccgtt cgacatgggt
      961 ggcttcgaca atcaccattg ccgcgccgga atgggcaagc atccccagat gcataaggtg
     1021 ccagtcattg gcgcagccat cgtcagctga gtactggcac atcggcgaaa caacgatgcg
     1081 attggcgagc tccaggcccg ccaggcgaaa cggcgtgaac aaggtacttg gcatgagagg
     1141 attcgactct ggctgggaag cgccggattt ggcgctgctg gatggatttc agataggcaa
     1201 taatagcacc cacatcaatc ggccaactga attatctggg aggccgcaaa tctgcgcccg
     1261 aagcacgagc tgatgggcga ccggcaagcg cggcccaagt tgcggctagg cgctcggcat
     1321 cgtgaagttg ggaggcgagc tgttcctgcg tgcaatagcg tttccaccgg ccgctgcgct
     1381 cgagctcgcg tatataggca agccttcgct gcgccaaggc atgccatttc tcggcgatcc
     1441 tatctaaagc aacttcgccc cgaacagttg ccattgaatg ccccccggca ctcgccaatc
     1501 cggtaatcga tcgagccgca atgcatcgac gacacccgaa aatggcacga aaacaacggc
     1561 atctagctgg aaaacgcgct ggcccccgat tcttgacctc ttcaaagaga aggccgccta
     1621 gaggcggatt cgcagcttat tggcaatctc acca
//
LOCUS       DATDHO010000046         2546 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_249622, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000046 DATDHO010000000
VERSION     DATDHO010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2546
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249622"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1055)
                     /locus_tag="VIY07_00805"
     CDS             complement(<1..1055)
                     /locus_tag="VIY07_00805"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY6380324.1"
                     /translation="MVSLIHSAALLLALLVGTTPTFAQVAAATRAPSIAPAQTFAARN
                     GMVVAQEQRAARIGVEILERGGNAVDAAVAVGFALAVTYPRAGNIGGGGFMVIHLGKT
                     GQNVAIDYRETAPAAATETMFLDASGEADPKKSRDSALSIGVPGTVAGLALAHEKYGS
                     RKSSFAELIAPAITLARNGVDVVDDIADTLPAAQPRIARWPSSAPVFLNSDGHVLMPG
                     QDLLQPDLAITLRAIASEGPKGFYEGPVAEKIAAAVRKAGGIMTTEDLKNYRAIVRTP
                     LRGTYRGYDIVSMPPPSSGGVHLIEMLNILEGYDVAALGAGSAQSIHLMLEAMKRAYA
                     DRAAFLGDPDAVKIPLKG"
     gene            complement(1138..1707)
                     /locus_tag="VIY07_00810"
     CDS             complement(1138..1707)
                     /locus_tag="VIY07_00810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113454.1"
                     /note="This protein belongs to a clade of uncharacterized
                     proteins related to peroxidases such as the
                     alkylhydroperoxidase AhpD; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase-related enzyme"
                     /protein_id="HEY6380325.1"
                     /translation="MADDVPVIALNLEAAKLSPAMAAYFKKCQDKLGFVPNVLLAYAF
                     DMAKLEPFVAMYNDLMLGESGVSKLEREMIAVAVSSQNRCYYCLAAHGAAVRHYSGNP
                     LLGEHLVMNYRIARLNKRQRSMLDFAVKLTASPWTVEEGDRERLRRVGFSDRDIWDIS
                     AVAGFFNMSNRVASATDMRPNVDYHGQAR"
     gene            2095..>2546
                     /locus_tag="VIY07_00815"
     CDS             2095..>2546
                     /locus_tag="VIY07_00815"
                     /inference="COORDINATES: protein motif:HMM:NF045284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380326.1"
                     /translation="MVAELPAREEESAARAVIEEACAVLARRRLDIPRTFVAQLYGRS
                     VPEDLLRYGAEDLAALAERAYDFMVERTPGAPKIRCETVPLTASGGRKAISVIEIVND
                     DMPFLVDSVMGEIAERHLDVRLVAHPVIGVAREGSKLVTLGAPAAQKNR"
BASE COUNT          474 a          767 c          796 g          509 t
ORIGIN      
        1 cccttgagcg gaattttcac ggcatccgga tcgccaagga acgccgctcg gtccgcgtaa
       61 gcgcgcttca tcgcttcgag catcaggtgt atggattgag cgctaccggc gccgagggcg
      121 gccacatcgt agccttcgag aatgttcagc atctcgatca ggtgaacgcc gccggaggag
      181 ggcggcggca tcgagacgat gtcgtagccg cgataggtgc cccgcagcgg cgtacgcacg
      241 atcgcgcggt aatttttcag gtcttcggtc gtcatgatgc cgccggcttt tcgtacggca
      301 gcggcgattt tttccgcgac aggaccctcg tagaaccctt tcggtccttc gctcgcgata
      361 gcgcgcagcg tgatggcaag atcaggttgc agcaggtcct ggccgggcat gagcacgtgg
      421 ccgtcgctgt tgagaaagac gggcgcgctc gaaggccagc gcgcgatccg cggctgcgcc
      481 gccggtagcg tatctgcgat gtcatcgacg acgtcgaccc cattgcgggc cagcgtaatc
      541 gccggcgcga tcaactcggc gaatgacgat ttgcgcgagc catatttttc atgtgcgaga
      601 gcaaggccag ccaccgtgcc cggcacgccg atcgacaatg cggagtcgcg cgattttttc
      661 ggatcggctt cgccgctggc atccagaaac atcgtctcgg tggcggctgc cggcgcggtc
      721 tcgcgatagt cgatggccac attctgaccg gtcttaccaa gatgaatcac catgaagccg
      781 ccgccgccga tattgccggc gcgcggatag gtgaccgcga gcgcgaatcc aaccgcgacg
      841 gcggcgtcta cggcgttgcc cccacgctcc agaatttcga cgccgatacg ggcggcacgt
      901 tgctcttgcg ccaccaccat gccattgcgg gcggcaaagg tctgcgccgg cgcgatcgac
      961 ggcgcccgcg tagccgccgc gacctgggcg aaggttggcg tcgtgccgac taacaacgca
     1021 agaaggaggg cggcactatg gatgaggctg accatatcga tttgtcacgg ccgggcttga
     1081 tggggggcct ataaaaccgg gatgcgcggg acaagcccgc gcatgactgc ggaaatgcta
     1141 ccgtgcctgc ccgtgataat ccacattggg ccgcatatcg gtggccgatg ccacgcggtt
     1201 cgacatattg aagaaaccgg ccacggcaga aatgtcccag atatcccggt cggagaatcc
     1261 aacgcgccgt agccgctcgc ggtcgccctc ctcgacagtc cagggcgagg ccgtgagctt
     1321 gactgcgaag tcaagcatgg agcgctggcg cttgttcagt cgggcaatgc gataattcat
     1381 gaccaggtgt tcgccaagca gcgggtttcc ggaatagtgg cgcaccgcgg cgccgtgggc
     1441 ggcaagacag tagtagcagc gattctgcga cgacacggcc actgctatca tctcgcgttc
     1501 gagcttcgat acgccggatt ccccaagcat caggtcgtta tacattgcga cgaatggctc
     1561 cagctttgcc atgtcgaagg cgtaggcgag gagcacattt ggcacaaaac ccagcttatc
     1621 ctgacatttc ttgaaatagg cggccatcgc gggagatagt ttcgccgctt cgaggttgag
     1681 cgcgatgact ggaacatcgt ccgccactgc ggtcggtggc ttggtcggga ttgatttcac
     1741 ggtcggtttg gctggtgatg gtttcgcgga tgcggctttt ccccctttga tcgcccgcaa
     1801 aaccggtttg cccgatgcgg ccgccttgtt gacggctttg gctgatttat cggcccttgg
     1861 catttcccgt ccttctgaat ttcaagagta gtccacccac agcctacaat gttccggtca
     1921 gctgcgatac gatccgtcgg aacggattcc atcttttggc tcatgcagtt aatctctgcg
     1981 gccgcgttgt tttgcgcccg tcaaccgtat gtcaccaaat gatgtgttgc tctcgatgcg
     2041 cttgagatga aaccttcagt gccgtgaccg atccctggag agcgacgagg ttccatggtc
     2101 gccgagcttc ccgcccgtga ggaagaaagc gcagcgcgcg ccgtgatcga agaggcgtgt
     2161 gcggtgcttg cccgccgccg cctcgacatc ccgcgaacct tcgtcgcaca gctttacggc
     2221 cgatccgtgc ccgaagacct gctgcgctac ggcgccgaag atctcgccgc attggccgaa
     2281 cgcgcatacg acttcatggt cgaacggact ccaggcgcgc caaaaattcg ttgcgaaacc
     2341 gtgccgctca ccgcgtccgg cggtcgtaag gcgatttcag tgatcgagat cgtcaacgat
     2401 gacatgccct tcctggtcga ttcggtaatg ggtgagattg cggaacgcca tctcgatgtg
     2461 cgcctcgtcg cgcatccggt catcggagtg gcgcgcgagg gcagcaaact ggtgacgctc
     2521 ggtgcgccgg ctgcgcaaaa aaatcg
//
LOCUS       DATDHO010000047         2663 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_150936, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000047 DATDHO010000000
VERSION     DATDHO010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2663
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_150936"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..970
                     /locus_tag="VIY07_00820"
     CDS             <1..970
                     /locus_tag="VIY07_00820"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HEY6380327.1"
                     /translation="LIRSLRRAWPSSTIDVLTFANTAGIVAGNPDIARVITMPEGPTA
                     AESVRLLARLWRRYDIAISTQSGDRPTVFAFAAGRLRAGVTTSDDPWLARKLKGVALH
                     RRVPAEDKLHRVEQMLRLADVLGIARVADLVCPAAARGSPVPTGNYALIHAAPMFTYK
                     EWTPEGWRTLASGLAKRGLSVVAIGGPGAAERRYLEEVWSGIAEIHQMEWPGMMSLLE
                     NARLYVGPDTSVTHLAAAAGCKTVALFGPTDPRVWGPWPVGGLATPWDASGTIQNRGN
                     VWIVQNPLPCMPCTFEGCERNIRSRSVCLHELAPAQVLAAADQALA"
     gene            1032..1889
                     /locus_tag="VIY07_00825"
     CDS             1032..1889
                     /locus_tag="VIY07_00825"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEY6380328.1"
                     /translation="MTFRIAVVQPIANPVEEAEKNVADAVDFIARAKAEGADFVCFPE
                     TYPGPWRMPATFDPTPRIAEAAAKHGINAVYGTIEPLSHNEGTAHNLICMAYGDGRPP
                     ASYRRTHPNGPWIYTGGQWWEFQYVAGKEFPVFDTQHGKVGLAMCSEVYMPEVTRALA
                     LRGAELIFMPAGTDKRRLWATWRNLIWSRAIENLAIVVTTQNLFSHAERGLAMVATPE
                     EILFESTGAGLFVVDVSLDRPREMRTTSDSVTSALNYGAKQGVLGQQWQRPELREVMY
                     PRPRDEAAE"
     gene            complement(1947..>2663)
                     /locus_tag="VIY07_00830"
     CDS             complement(1947..>2663)
                     /locus_tag="VIY07_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HEY6380329.1"
                     /translation="AVRRAASHDARLDTEALLGERAMIYETTEDGWAWGQLETDGYVG
                     WLSANALGASGPAPTHKVAALRAIVFPGPDIRLPAMVSLPMGAQLTIVRQDERFAITA
                     MGWHVPEVFIIPIKARQTDFVAVAEQFVGTPYLWGGKTSLGIDCSGLVQVSLNAAGIA
                     CPRDSDMQELSLGKLSSLASLRRGDLVFWKGHVAIARDPETLIHANAHHMMVAIEPAS
                     EAIARIKATGTEITAVKRVA"
BASE COUNT          504 a          857 c          811 g          491 t
ORIGIN      
        1 attgattcgg agcctgcgcc gcgcatggcc cagttcgacg atcgacgtgc tgacgtttgc
       61 caatacggca ggaattgttg cgggtaatcc cgacatcgct cgcgtgatca ccatgccgga
      121 ggggccaaca gcagcggaga gcgtgcgact cctggcgcgc ctctggcgcc ggtatgacat
      181 cgccatctcg actcagagcg gcgatcgtcc caccgtcttt gcctttgctg ccggccggct
      241 acgtgcaggc gttacaacca gcgatgatcc atggctcgcg cgcaagctaa agggcgttgc
      301 gttgcaccga cgcgtcccgg cagaggacaa actgcatcgc gtcgagcaga tgttgcgcct
      361 cgccgacgtc cttggaatcg cgcgcgttgc ggacctggtg tgtccagccg cggcgcgagg
      421 ctcgccggtc cccaccggca attatgccct catccacgca gcgccaatgt tcacctacaa
      481 ggaatggacg ccggagggtt ggcgcacgct cgcgtcaggt cttgccaagc gcggcctttc
      541 cgtggttgcg atcggcggcc ccggcgcggc cgagcgtcgt tatctcgaag aagtatggag
      601 cggcattgcc gaaattcatc agatggaatg gccgggcatg atgagtctgc tcgagaatgc
      661 gcgcctctat gtcgggcctg acacatcggt gacccatctt gccgccgcag cgggctgcaa
      721 gaccgttgca ctgtttggac cgacggatcc acgcgtctgg ggtccttggc cggttggcgg
      781 actcgcgacc ccgtgggacg caagcggcac aatccagaac cgcggcaacg tctggattgt
      841 gcagaacccc ttgccctgca tgccttgcac cttcgaaggc tgcgaacgca acatccgcag
      901 ccgcagcgtg tgtctccacg agctcgcgcc ggcgcaggtc ctggcggcgg ccgaccaggc
      961 gctcgcttga ccgcaccgcg cgcgcattcc aagcttgtct cgccgccgcc tgtacacttc
     1021 cggagttccg catgacattc cgcatcgccg tggttcaacc catcgccaat ccggtcgaag
     1081 aggccgaaaa gaacgtcgcc gatgccgttg atttcattgc ccgcgccaag gcggaaggtg
     1141 cggatttcgt ttgcttccct gaaacctacc ccggtccgtg gcgcatgccc gcgactttcg
     1201 atccgacacc gcgcattgcg gaagccgctg ccaagcacgg gatcaatgcg gtctacggca
     1261 ccatcgagcc gctgagccac aacgaaggca cggcgcataa ccttatctgc atggcctatg
     1321 gcgatggccg ccctcctgcc agttatcgcc gcacccatcc gaacggtcca tggatctata
     1381 ccgggggtca gtggtgggaa tttcaatacg tcgccgggaa agagttccct gtcttcgata
     1441 cgcaacacgg aaaagtaggc ctcgcgatgt gcagcgaggt ctacatgccc gaggtgacgc
     1501 gggcgcttgc actacgcggc gccgaattga tttttatgcc ggcaggaacg gacaagcggc
     1561 gactgtgggc aacgtggcgc aacctgatct ggtcgcgcgc gatcgagaac ctggcgattg
     1621 tcgtcaccac gcagaatctg ttcagccacg cggagcgagg tcttgcgatg gtcgctactc
     1681 ccgaggaaat cctgttcgag agcaccggcg ccgggctttt cgtcgtcgac gtaagccttg
     1741 accgtccgcg cgaaatgcgg acgacaagcg acagcgtgac ctcggcgtta aactatggcg
     1801 caaagcaagg tgtgctcggc cagcagtggc aacggccgga actgcgcgaa gtcatgtacc
     1861 ctcgcccgcg cgacgaagcg gcggagtaac atttcgccgg caaaatggct ggcgctcaac
     1921 cggacacgca ttgcagaact gctgcgctag gcgacccgct tgactgcggt gatttcagtt
     1981 cccgtcgcct tgatgcgtgc tatcgcttcc gaagccggct cgattgccac catcatatgg
     2041 tgcgcgttgg cgtgaatcag cgtctcgggg tcgcgggcaa ttgcaacgtg gcctttccag
     2101 aacaccagat cgccgcgccg caagctggcc aaagaggaca gcttccccag tgacagttcc
     2161 tgcatgtcgc tgtcgcgcgg acaagcaatt ccggcggcat tcagcgaaac ctgcaccagc
     2221 ccggagcaat caatccccag tgacgtcttg ccgccccaca aataaggcgt gccgacaaat
     2281 tgctctgcca cggctacgaa gtcggtctgg cgcgccttga tcggaattat gaatacttcg
     2341 ggcacatgcc aacccatcgc agtgatcgca aaccgttcat cctggcgcac gattgtcagc
     2401 tgtgcgccca tcggaagcga caccatggca ggcaacctga tgtccgggcc cggaaatacg
     2461 attgcgcgaa gagccgcgac cttgtgggtg ggggctggtc cacttgcgcc aagcgcgtta
     2521 gccgagagcc agccgacata gccgtcagtc tcgagctgtc cccaagccca gccatcctcg
     2581 gtcgtttcgt aaatcattgc ccgttcgccc agcagtgcct cggtgtcgag ccgagcatca
     2641 tgcgatgccg cgcggcgcac ggc
//
LOCUS       DATDHO010000048         4471 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_200300, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000048 DATDHO010000000
VERSION     DATDHO010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4471
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200300"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1097)
                     /locus_tag="VIY07_00835"
     CDS             complement(<1..1097)
                     /locus_tag="VIY07_00835"
                     /inference="COORDINATES: protein motif:HMM:TIGR01494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEY6380330.1"
                     /translation="MNLQQKSDTTDVLRTDNPVVAPIAMTRPPHEVSAEAVVAALATD
                     AAQGLSPSEAQNRLQQYGPNQLKSAPETPWWKRLLEQFQNFLVIILLVATVISVVEWL
                     LQDPRESALPYEAIVILAIVILNAMLGFIQESRAEKSVRALMALAAPESTVIRDGDRQ
                     RIATQEIVPGDIVLVEAGDKIPADSRLIEVANLKTDEAPLTGESVPVSKETRPIDGEV
                     GLGDRRNMLFSGTVATYGRGRAVVVATGMNTEVGRIAGLLETAEKEPTPLQQELDRTG
                     KRLSVIMLGICAVVFAAGLLSTTTFSLNVVLGLFLFAVALAVAAIPEALPAIVTVGLS
                     LGVRRMAAANAIVRKLPAVETLGAATVICSD"
     gene            complement(1140..1487)
                     /locus_tag="VIY07_00840"
     CDS             complement(1140..1487)
                     /locus_tag="VIY07_00840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380331.1"
                     /translation="MSITNRSKPVARLTRAPTFGPQVLFGIAVFAAFAVLAGAVTVLP
                     NALVAPVASTLLLVMAVAAALIGWLREGGADVARVTYWDVAGALTLVGIGAAALVEPD
                     QLARVFEAPLNQK"
     gene            1662..1952
                     /locus_tag="VIY07_00845"
     CDS             1662..1952
                     /locus_tag="VIY07_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY6380332.1"
                     /translation="MRVAKAVPQVKRRKQAGNWLKELRGRAGLSQIELAQALGLKYYT
                     FISQVENGFGRVPTESMEAWARALGVDPSSFARELLSHYDPELHRLLFEVNR"
     gene            1949..2392
                     /locus_tag="VIY07_00850"
     CDS             1949..2392
                     /locus_tag="VIY07_00850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380333.1"
                     /translation="MTVVMFPGAAQHGSWQRIELQQFVSMSSDAIAMGEASTWYVGVT
                     ERNDPQFFLIGPPPEHDCILTVSRLGRLYVIEDGAGHVLFESNNLTLLGEQAVAALRR
                     RKTAIVARVAVAWGALREFCEEKTEALGEHIELVGHFAPQLAPLV"
     gene            2549..3529
                     /locus_tag="VIY07_00855"
     CDS             2549..3529
                     /locus_tag="VIY07_00855"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6380334.1"
                     /translation="MNPFRRICVAIGAVALGCSALLLQTPEAAAQSYPNRTVTIIVPF
                     GAGSITDSLARVLADKLGAMWKQSVVVENRPGLPGTTAVAKSAPDGYTLMLTSNGHTI
                     AGVINKGIQFDPVKDFAGVTVIASVPLVAIVPVDFPAKTLKDFVALANESPGKLNFSS
                     AGVASTSFLSAEIFRQGAKINIVHVPYKGAPDATNAVIRGDVQIYFAPIPNAKELSEA
                     GKVRAIAINSDKRSPQLPNVPTVAEAAVPGYKYESWFGVLAPAGTPPAILTQVSRDIA
                     QVLKMPDMVEKLTTFGSIPAANSPEQFDAIIKSDTERYGKVLKDAGVAVN"
     gene            complement(3608..3805)
                     /locus_tag="VIY07_00860"
     CDS             complement(3608..3805)
                     /locus_tag="VIY07_00860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380335.1"
                     /translation="MLIYVLIVAICESVAVAIGLTLDRVYPALSLPVSLSLFFAILWL
                     AWVLAVRLTDPKRVKSAKHAT"
     gene            4147..>4471
                     /locus_tag="VIY07_00865"
     CDS             4147..>4471
                     /locus_tag="VIY07_00865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380336.1"
                     /translation="MSNAKERFLAGTMLSAMLMGPLHALALDPSYVVAQAPAQTEEEK
                     KQPQRPGQPARPQPQQQKPEQRPQQAPPGQQRVQPPPGQPPGQPSGPPQQRQVQPPPG
                     PPQQRQ"
BASE COUNT          902 a         1330 c         1361 g          878 t
ORIGIN      
        1 ttgtccgaac agatcacggt tgcagcaccc agcgtctcga ccgccggcaa tttgcggacg
       61 atggcattgg ccgcggccat gcggcgcacg ccgaggctca ggcccaccgt cacgatggcc
      121 ggcagcgcct cgggaatggc ggcgacggcg agcgccacgg cgaacaagaa caggccgagc
      181 acgacgttga ggctgaaggt cgtggtgctg aggaggcccg cggcgaatac cacggcacag
      241 atgccgagca tgatcacact cagccgcttg ccggtgcggt caagctcctg ttgcagcggc
      301 gtcggttctt tctccgccgt ttccagcagc ccggcgatgc gacccacttc tgtattcatg
      361 ccggttgcca ccaccacagc gcgcccacgt ccataggtcg ccacggtgcc ggaaaacagc
      421 atgttccggc ggtcgccgag gccgacttcg ccgtcgatcg gcctggtctc cttcgacacc
      481 ggcacactct caccggtgag gggcgcttcg tcggttttta gatttgccac ttcaatcagg
      541 cgggagtccg ccggaatctt gtcgccggct tcgaccagca cgatgtcgcc ggggacgatc
      601 tcttgtgtag caatacgctg ccgatcgccg tcgcggatca cggtggattc gggcgcggcc
      661 aacgccatca gcgcgcgcac cgatttttcg gcgcgcgatt cctggatgaa gccgagcatc
      721 gcattgagga tgacgatcgc gaggatcacg atcgcctcgt aaggcagcgc gctttcgcgt
      781 ggatcctgta gcagccactc gaccaccgag atgacggtcg cgaccagaag gatgatgacc
      841 aggaagttct ggaactgctc cagtagccgc ttccaccagg gcgtttccgg cgcacttttc
      901 agctggttcg gaccgtattg ctgcaagcgg ttctgcgcct cggatggact caagccttgc
      961 gccgcatcgg tggcgagcgc ggcaacgacg gcctcagccg acacctcgtg gggaggccgc
     1021 gtcatggcga ttggcgcaac cacgggattg tcggttcgca ggacgtcagt ggtgtctgac
     1081 ttctgttgca gattcacggt tacggtcctc gtgctgtcgt tgggcgttcg gttggtgggt
     1141 tatttttggt tgagcggggc ttcgaacacc cgcgcgagct gatccggctc aacgagcgcc
     1201 gctgcgccga ttccgacgag cgtgagcgcg ccggcgacgt cccagtaggt cactcgggct
     1261 acgtcagctc cgccttcgcg cagccatcca atcagtgcgg ccgcgacggc catgacgagc
     1321 aacagggtac tggcgaccgg tgcgacgagt gcgtttggca gtacggtgac ggcgcctgcc
     1381 aacacggcga atgccgcgaa gacggctatc ccaaaaagca cttgcggtcc gaacgtcggc
     1441 gcgcgggtca gccgcgcgac cggcttgctc cggttggtga tcgacatggt ccatggctcc
     1501 tgcaccgggc ccgcgccgct ttcgacgagt ggcccacagt gatctgtcgt cttggcatca
     1561 cgaattgtgc tagactgcgt ttcgtggctg tctatgcgtt aaatatagtt tagtaacttt
     1621 gaaactaggc gcaaatagaa agcggtctat tggggaccag tatgcgggtt gcgaaggcgg
     1681 tgccgcaggt caagcggcgg aaacaggccg gaaattggct aaaagagctg cggggacggg
     1741 cgggtttgtc gcagatcgaa ctcgcccaag cgctgggtct taaatactac acgttcatct
     1801 cccaggtgga gaatggcttt ggcagagttc cgacggaaag catggaagcc tgggctcgtg
     1861 cgctcggtgt cgatccgtcg tcgttcgcgc gggagctctt gtctcactat gaccccgaac
     1921 tgcatagact ccttttcgag gtgaaccgat gactgtggtg atgttcccgg gcgcggcgca
     1981 acacggaagc tggcagcgaa ttgagcttca gcagttcgtg tcgatgtcct ccgatgcaat
     2041 cgcaatggga gaagcgagca cctggtatgt tggcgtcact gagcgcaacg acccgcagtt
     2101 ttttctgatc ggcccgccac cggagcatga ttgcatcctt acggtctctc gtctgggtcg
     2161 actttacgtc atcgaagatg gcgcgggtca tgtcctgttc gagagcaaca atctcacgct
     2221 tttgggcgag caggctgtcg cggcgctgcg ccgccgcaag acggctattg tcgcgagggt
     2281 ggcggtcgcc tggggcgcgc tgcgcgagtt ctgcgaggag aagacggaag ccctgggaga
     2341 gcatatcgag cttgtaggcc attttgcccc gcagcttgca ccgctggtct gaccttttgc
     2401 cccgtatctg gtgggcaaat gccatgatta ttctgttctg tgtcacgcgg cggcacctat
     2461 cgtccctgta ccatcacggt cgagtgcttg ctggccagtc cgtgctcgcg ataaactggc
     2521 tcgacaagac aagcgttggg aggagttcat gaacccgttt cgaagaatct gcgtcgcaat
     2581 tggtgccgtc gcattaggct gctccgcatt gctgttgcag acacccgaag ccgcggcgca
     2641 gtcctatccc aaccggacgg tgaccattat cgtcccgttc ggcgccggca gcatcaccga
     2701 cagtcttgcc cgggtgctcg ccgacaaact gggcgcgatg tggaagcaat cggttgtcgt
     2761 agaaaatcgc cccggtcttc ccgggacgac ggccgtggct aaaagcgcac ccgacggcta
     2821 cacgctgatg ttgacgtcca acggccacac gatcgccggc gtcatcaaca agggcatcca
     2881 attcgatccg gtgaaggatt tcgccggggt gacagtcatc gcttcggtgc cgcttgtcgc
     2941 gatcgtacct gtcgattttc cggccaagac gctgaaggat tttgtcgcgc tggcgaacga
     3001 gtcgccggga aagctgaatt tctcatcagc cggtgtagcg agcacctcgt ttctgtctgc
     3061 cgagattttc aggcagggtg ccaagatcaa catcgtccat gttccctaca agggtgcgcc
     3121 tgacgcgacc aatgccgtga tccgcggcga cgtccaaatt tattttgcgc ccattcccaa
     3181 cgccaaggaa ctgagcgagg ccggcaaagt tcgcgccatc gccatcaatt ccgacaagcg
     3241 ctcgccccaa ctgccaaatg ttccgaccgt cgcggaggcc gcggtgccag gctacaagta
     3301 tgaatcgtgg ttcggggtgt tggctcctgc cggaacgccg cccgcaatcc tgactcaggt
     3361 cagccgggac atcgcccaag tgctgaaaat gccggacatg gttgaaaagc tgaccacgtt
     3421 cggctcaatt cctgccgcca actcaccgga gcaattcgac gcgatcataa agagtgatac
     3481 ggagcgctac ggcaaagttc tgaaggacgc gggcgtcgcc gtgaactagc tccacggcga
     3541 ctgcgcagat caaacgacgg ataaagtcca ccgaacgatt ggtatccgtc ctgacgtcgc
     3601 cagggattta ggtcgcgtgc tttgcgctct tcacgcgctt tgggtcggtc agccgcacag
     3661 cgagaaccca cgccagccag agaatggcaa agaagagcga taacgaaacc ggcaaactga
     3721 gtgccggata aacgcgatcc agggttaagc caattgcgac ggcaacagat tcgcagattg
     3781 cgacaattaa aacgtaaatc aacatgatcc acattgattt tgctctcctg ctggcggcca
     3841 tccttgaaaa tgtttgtacg accggccagc cggttcgaaa cgtaaattga ccgtaaatat
     3901 tcagaggtcc gatcaggcgt tcagcggtcg gatatgcatg ttcgcgccga gatcaaaatt
     3961 tttcgattgg acaacgaacc cacgaatcac atggaaagcg cggaatatca ttggaaccag
     4021 cgcagcattc gctgatgcaa gcgttttcgc cgtaattacg tccgattcca ttcagatgtc
     4081 attcagagcg aaagtgctca ggtcacttcg tgttctaatt ctcgatgcag tgaaaatcag
     4141 gtcctgatgt ctaacgcaaa agaacgtttc ctggctggga cgatgctgtc ggcaatgctg
     4201 atggggcccc tccacgcctt ggctctcgac ccaagctacg tcgtggccca ggcgccggcg
     4261 cagaccgagg aagaaaagaa gcagccgcaa cgacccggcc agccggctcg accacagccg
     4321 caacaacaga aaccggagca gcggccgcag caagcgccac ccggtcagca gcgtgtgcaa
     4381 ccgccgccag gacagccgcc aggacagcca tcagggcctc cgcagcaacg tcaggtgcaa
     4441 ccgccaccgg ggcctccaca gcagcgtcag g
//
LOCUS       DATDHO010000049         6019 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_2302, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000049 DATDHO010000000
VERSION     DATDHO010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6019)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6019)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6019
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2302"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(195..701)
                     /locus_tag="VIY07_00870"
     CDS             complement(195..701)
                     /locus_tag="VIY07_00870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380337.1"
                     /translation="MNEWLAVAPQAQAAHGQTGCLVSLNDFADRPPRELKDGETIDLG
                     GGKRVRFIDTPHTPHGWDAGVLYEESTRTLLCGDLFTQLGDGAALTEGDIVGPAIAAE
                     DVFKYSSLSPNMGTTIRDLAKLSPRTLALMHGPSFAGDGAAALRALADDYNRRVSDCR
                     LTAEGKAA"
     gene            1064..1639
                     /locus_tag="VIY07_00875"
     CDS             1064..1639
                     /locus_tag="VIY07_00875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY6380338.1"
                     /translation="MSRTYTLKRRAEQQAQTRRRIVEAAVDLHSSVGPGLTTFSMVAE
                     RAGVQRHTLYAHFPDERSLFLACSGLAFERDPPPDAGPWRKLADRQERLRVGLSAIYD
                     WYDRNAELAACVLRDAEYHPLTKEIFDLRFGPYMTVYREVLGTRLDVKQRTVLELALS
                     FFTWRTLARDGGLKRKAAVDAMVRSIECLAA"
     gene            complement(1654..2187)
                     /gene="ppa"
                     /locus_tag="VIY07_00880"
     CDS             complement(1654..2187)
                     /gene="ppa"
                     /locus_tag="VIY07_00880"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEY6380339.1"
                     /translation="MRIDAIKIGNNPPEDVNVIIEVPIGGEPIKYEMDKAAGTLVVDR
                     FLHTPMRYPGNYGFVPHTLSDDGDPIDVLVANTRPIAPGAVINVRPVGVLKMEDEAGA
                     DEKVIAVPMPKLTQRYSHIMNYTDIPKITLEQIQHFFEHYKDLEPGKWVKVVNWGDAA
                     EAKKMIVEAIARAQSKK"
     gene            complement(2277..4337)
                     /locus_tag="VIY07_00885"
     CDS             complement(2277..4337)
                     /locus_tag="VIY07_00885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005615 - extracellular space [Evidence
                     IEA];
                     GO_function: GO:0047989 - hydroxybutyrate-dimer hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019605 - butyrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate oligomer hydrolase family
                     protein"
                     /protein_id="HEY6380340.1"
                     /translation="MKPAVALVAASALAAGIGLVIAEAAEPDETKIIHTHYDGVTNDL
                     LTAGLGKTGLGGSTPPGFADPLHPTAEELRRSAIYNNYRALIDPTPGGGYGTLYGPNV
                     KPDGTVTASEGLIPGDEYIAYERGGHERVTMLVQVPDSFDPGNSCIVAAPSSGSRGVY
                     GAIATAGEWGLKHGCAVAYTDKGTGTGAHNLPNNTINLIRGERAGASFAARGNFIAPI
                     SESQRAAFNDATPNRFAFKHAHSQANPEKDWGRNVLRSIEFALEVLKDKFAGRANITR
                     RNTIVIASSVSNGGGASVRAVEQDDDRLIDGLAVGEPNVNPKFSSDFSIVQGNGPPLL
                     AHSRPLMNYITLVNVFQGCANLAPANAGAGLNSAGSPARCSDLHAKALLSSTTLVDQA
                     AEAQKIINDFGILPEQNLVQPGYWFANVPQSISVTYANTYGRFSVLDNLCGYSFAANA
                     GVPGGAPVPLAAAAEAAIFGASSGIPPTSGVALINNAAPGGPREDRGSTPNQNLDGAL
                     CLRSLATGKDAVTGAPLGGSQQAQASRIANGVEEVLATGRLRRIPTIFVTGRNDGILP
                     PNFTSRAYFGLNKVVEGSTSSLHYYEITNAHHLDALNQFPGYNANYVPLHRYYIQAMD
                     LMYDHLRHGRPLPPSQVVHTIPRGPGAPLPPPITPANVPPIAEAPPPGSQITFAAGQV
                     KIPD"
     gene            complement(4516..4803)
                     /locus_tag="VIY07_00890"
     CDS             complement(4516..4803)
                     /locus_tag="VIY07_00890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380341.1"
                     /translation="MKQIFSFALFVGIVVVLPVAAASAPLAPFKYAAPGLTSPMADGC
                     GINRYRDSRGICRRKYEFTRHRGKPQLYGACGGVDSHRVCNLYGQCWMVCD"
     gene            5330..5941
                     /locus_tag="VIY07_00895"
     CDS             5330..5941
                     /locus_tag="VIY07_00895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380342.1"
                     /translation="MKVAALVALVVLMALPAEAAQRHRQPASPAVTCDNNGRCTTQNA
                     GARTQGQETAGAASQNMVAAASRRARAVDANGNAAYGVVISLKTGAKARVGISYAARF
                     QAYIDDLENNYGARVLFMGGIRPGHCSPASEHPCGKALDVCQRRRGVVDPRCNLPGRV
                     ALGRIAASHGLFEGGRWCDSDYGHAQIGVTAAACSDKIRIVRQ"
BASE COUNT         1133 a         1770 c         1895 g         1221 t
ORIGIN      
        1 ttttttgtgc cgagtgcggt cgcgacagtg tgggccgacc ctgcgaagat gtgcacgtgg
       61 attccaaccg acctgaacta ccgcggcact aaaccgtcca gagtgatcga gaagcacgcc
      121 cacagccatc ttgccgatgt ctgaagttaa gaagcccaac agatgccagg gccgtaacaa
      181 ctccccttga atacttacgc agccttgccc tcggcggtga gccggcaatc ggagacgcgg
      241 cggttgtagt cgtccgccaa ggcgcgcagc gcagccgcgc cgtcacccgc aaaagagggg
      301 ccgtgcatca gcgccagcgt gcgcggcgac agctttgcaa gatcgcgaat tgtcgtgccc
      361 atgttcgggc tgagggagga gtatttgaac acatcctcgg cggcgattgc cggaccgaca
      421 atgtcgcctt cagtcaacgc cgcgccgtcg ccgagctggg taaacaggtc accgcacagc
      481 aaggttcggg tcgactcttc gtagaggacg ccggcgtccc agccgtgcgg cgtatggggc
      541 gtgtcgatga agcggactct cttgccgccg ccgaggtcga tggtttcgcc gtccttgagt
      601 tcgcggggcg ggcggtcggc gaaatcgttg agggacacca ggcatccggt ctgtccgtgc
      661 gccgcctgcg cctgcggcgc gaccgcgagc cactcgttca ttgcgccact cgtccgcctc
      721 gaagtgaccg aaggcgatcc agcgcaaacg ttccagcggg atgatgcggc tgacggcatc
      781 ccggttgagc ggaaacatct tgcgcagacc ggtgtgaaac atcagcggct cgtctccgag
      841 cacgagaaac tgattgaagg tgaagccggc gggtggggcg atgtccggca cgaaggtcga
      901 gaaccgatag atgccgtctg cgagctcgct ggttctggtt tccatgattt tctccgtcgc
      961 tcggccggga ggcggtggac atcggcgata tttcactgta cagttgtgtg tagcgaaaat
     1021 atgcgagcct gtcaatatgg gtgcacccgc acgtgcaacg aaaatgagcc gaacctacac
     1081 cctcaagcgc cgcgctgagc agcaggcgca aacgcggcgg cgcatcgtcg aagcggccgt
     1141 cgacctgcac agcagcgtcg ggccagggct cacgaccttc agcatggtgg ccgaacgggc
     1201 cggcgttcag cgccatacgc tgtatgcgca ttttcccgac gagcggagcc ttttcctggc
     1261 ctgttccggg ctggcgtttg agcgcgatcc gccgccggac gccggaccct ggcggaagct
     1321 cgccgatcgg caagagcggt tgcgagtcgg tctttcagcc atctatgact ggtatgaccg
     1381 caatgccgaa ctggctgcat gcgtgctgcg cgacgccgag tatcacccac tgacgaaaga
     1441 aattttcgac ttgcgatttg gaccgtacat gacggtctat cgggaggtgc tcgggaccag
     1501 gttggacgtg aagcagcgaa ctgtgctgga gctggccctc agcttcttca cctggcggac
     1561 actggcgcgt gacgggggcc tcaaaaggaa agccgcagtc gacgcaatgg tccgttccat
     1621 cgagtgcctg gcggcctgaa atcaggaacg aatttacttt ttcgactgcg cgcgcgcgat
     1681 cgcttcgacg atcattttct tggcttcggc cgcatcgccc cagttcacga ccttcaccca
     1741 cttgccgggt tcgagatcct tgtagtgttc gaagaaatgc tggatctgtt ccagcgtgat
     1801 cttcggtatg tccgtgtagt tcataatatg tgaatagcgc tgggtcagct tgggcatcgg
     1861 caccgcgatg actttttcat ccgcgccagc ctcgtcctcc atcttgagca cgcctacagg
     1921 ccgcacattg atgactgcgc ccggggcgat cggccgcgtg ttcgccacca gcacgtcaat
     1981 cggatctccg tcgtcggata acgtgtgcgg cacgaaccca tagttgccgg gatagcgcat
     2041 cggcgtatgg agaaagcgat cgacaaccag cgttccggca gccttgtcca tctcatattt
     2101 gatgggttcc ccgccaatcg gaacttcaat gatgacgttc acgtcctccg ggggattatt
     2161 cccgatcttg atcgcgtcga tccgcatggc cgtctacctg atgtctcgaa cacctgaccg
     2221 ggcattataa agcacggcag aggcaccgcc gtcacaccga ggatcgtagt ccgcgatcaa
     2281 tccgggatct ttacctgccc tgccgcgaat gtgatttggc tgcctggcgg cggagcctcc
     2341 gcgattggag ggacgttggc aggcgtgatc gggggcggca acggcgcgcc gggcccgcgt
     2401 ggaatcgtgt gcacgacctg gctcggcggc aagggccggc catgccgcag atgatcgtac
     2461 atcagatcca tggcctggat gtaatagcga tgaagcggaa cgtagttcgc gttgtagccg
     2521 ggaaactggt tcaaggcatc gaggtggtgc gcatttgtga tctcgtagta gtgcaacgag
     2581 ctggtcgatc cctcgaccac cttgttgaga ccgaaatagg cacgcgaggt gaagttcgga
     2641 ggcaggatgc cgtcgttgcg tccggttacg aaaatcgtcg gaatgcgccg cagccttccg
     2701 gtcgcaagaa cctcttccac tccgttggcg atgcgcgagg cctgggcctg ctgcgagcca
     2761 ccaagaggcg ctcccgtgac tgcgtccttg ccggtcgcga gcgaacgcag gcagagcgcg
     2821 ccatcgagat tctggttcgg ggtcgagccg cggtcctctc ttggtccgcc tggtgcggcg
     2881 ttgttgataa gggccacgcc ggaagttggc gggatgccgc tgctggcgcc gaagatcgct
     2941 gcctccgccg cggcagcgag cggcaccggt gctccgcccg gcaccccagc gttggccgca
     3001 aagctgtaac cgcaaaggtt atcgagcacg ctgaagcgac cgtaagtgtt ggcgtaggtc
     3061 accgatatcg attgaggaac attggcaaac cagtaccccg gctggaccag attctgttcg
     3121 ggaagaatgc cgaagtcatt gatgattttc tgagcctcgg cagcctgatc gaccagcgtc
     3181 gttgaagaca gtagcgcctt cgcatgaagg tcggagcagc gcgccgggct tccggcggaa
     3241 ttcagtcccg cgccggcatt cgccggcgcg aggttggcac agccctggaa cacgttgacg
     3301 agagtaatgt agttcatcag tggccggcta tgcgccaaca gcggaggtcc atttccctgc
     3361 acgatcgaaa agtcggagct gaatttcgga ttgacgttcg gttcaccgac tgcaaggcca
     3421 tcgatcaggc ggtcgtcgtc ctgctcgacg gcgcgcactg acgcgccgcc gccgttcgag
     3481 acgctcgagg cgatcacgat cgtgttgcgc ctggtaatgt tcgccctgcc ggcgaatttg
     3541 tccttgagca cttcgagggc gaactcgatc gaacgcagca catttctgcc ccagtctttc
     3601 tccgggttgg cttgggaatg cgcatgcttg aaagcaaagc ggtttggcgt ggcgtcgttg
     3661 aaggccgcgc gctggctttc cgagatcgga gcaatgaaat ttcctctggc cgcgaagctt
     3721 gcgccggcgc gctctccgcg gatcaggttg atcgtattgt tcggcagatt gtgagcgccg
     3781 gtgccggtac ccttgtcggt ataggctacc gcgcacccat gcttgagtcc ccactcgcct
     3841 gcggtggcga tcgcgccgta gacgccgcgc gagcccgaag agggtgctgc gacgatacaa
     3901 ctgttacccg gatcgaagct gtcgggcacc tgcaccagca tggttacgcg ctcgtgcccg
     3961 ccgcgttcgt aggcgatgta ttcgtcgccc ggaatcagtc cctcgctggc ggtcaccgtt
     4021 ccgtccggtt tgacgttggg cccgtacagc gtgccgtagc ccccgcccgg cgtgggatcg
     4081 ataagggcgc ggtaattgtt atagatcgcg gaacgccgaa gttcttccgc cgtcggatgg
     4141 agcgggtcgg caaagccggg cggcgtcgag ccacccagtc ccgtcttgcc gagaccagcg
     4201 gtcagcagat cgttggtaac gccgtcgtag tgcgtgtgga tgatcttcgt ttcatcaggt
     4261 tcagccgctt cagcgatcac caggccgata ccggccgcca acgctgacgc agccacaaga
     4321 gcgacagcag gtttcatcaa catcctcatt ttgcgttcct gcattgtttc gcagcaatga
     4381 tgccaatgcc tgatcaaggt tggcgtgggg cagtgcgttt cgactcgtca tggccgggcc
     4441 gtccttcgga cggctatgcg cgggcatgac aagcgagagg catgaccgac gttctttcaa
     4501 gtcgaacagg cccgctcaat cgcagaccat ccagcattgc ccatagagat tgcacacgcg
     4561 atgagagtct acgcctccgc aggcgccata cagttgaggt ttcccgcgat ggcgagtgaa
     4621 ctcatatttg cggcggcaga tcccgcgcga gtcgcgatac cgattgattc cgcatccatc
     4681 cgccatcgga ctggtcaatc cgggcgccgc atatttgaaa ggcgcaagag gcgcggatgc
     4741 ggccgcaacc ggaagcacga cgacaatgcc gacaaatagt gcaaacgaaa aaatttgttt
     4801 cattcggttt tccgcatgtc ctgcagtcgg attatccagc cgcgcgattg tgtctgcaga
     4861 atgcgatccg cgcttgtgca acgatcggtg cccagtctac tcgaatatta ggcactccgg
     4921 gattgagaat ggagagcggt atgctgctga gcgcgaccga atcaaaaagc gaatcgctgc
     4981 aaacgtccgt gcgcttcgac aatcgtttgc gagcggtaat atcgtgtatt ttgtgcatta
     5041 acccgcatat ggcgcgacgc atgcattaat ggtaggttcc tgcctccggg tcagccccgt
     5101 tctgcgttat gtcagagggg aggttggcta cgagtcgttt gtctttggtg gatcggctct
     5161 ctgtcggggt gattgcgcac aacactggct gttacgtgcg ttgctgatcc aagtaaaaac
     5221 tcgtcgtcat attccgcgtg cacctgcgtg ccacgaagcg cgccgcgata gagcgatgcg
     5281 ccacagtgag tgtgactgag cgtgtatccg cctaatccag gaggagagca tgaaggtcgc
     5341 tgcacttgtt gccctcgtgg tgctcatggc gctgccggcc gaggccgctc aacgtcatcg
     5401 tcagcctgcg tcgccggcgg ttacatgtga caacaatggc cgctgcacaa ctcaaaatgc
     5461 gggtgcgagg acacagggcc aggaaacggc aggagctgca tcccagaaca tggtggcggc
     5521 cgcttcaaga agggcgcgcg cggtcgatgc taacggcaac gcagcttatg gcgtcgtgat
     5581 atccctcaag acaggcgcga aagctcgcgt tggcatttcc tatgccgcgc gctttcaggc
     5641 ctacatcgat gacctcgaaa acaattacgg cgcgcgcgtg ctgttcatgg gcggcatccg
     5701 gcccgggcat tgttcgccgg caagcgagca tccgtgcgga aaagccctgg acgtatgcca
     5761 gcgtcggcgc ggggtcgttg atccgcgatg caatctgcct ggtcgcgtcg cgctcgggcg
     5821 gatcgccgct tcgcacggcc tcttcgaagg cggccgctgg tgcgattcgg attacggcca
     5881 cgcgcagatc ggcgtaaccg ccgcggcgtg ctcggataag atccgcatcg tccggcagta
     5941 aagacgtttg tcacctcaca gtgacttcca ttctgctgtc atgcagcgcg gaatgttgcg
     6001 cggttatcga atcttgctg
//
LOCUS       DATDHO010000050         2378 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_299588, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000050 DATDHO010000000
VERSION     DATDHO010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299588"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(112..187)
                     /locus_tag="VIY07_00900"
     tRNA            complement(112..187)
                     /locus_tag="VIY07_00900"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(152..154),aa:Lys,seq:ttt)
     gene            391..1557
                     /locus_tag="VIY07_00905"
     CDS             391..1557
                     /locus_tag="VIY07_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20 aminoacylase family protein"
                     /protein_id="HEY6380343.1"
                     /translation="MPVVNRVADLHAEITTWRRDLHAHPELMFDVQRTAGTVAEKLKA
                     FGCDEVVTGIGRTGVVGVIHGRKGSKGKTIGLRADMDALPIEEASDLAYKSTVPGKMH
                     ACGHDGHTAMLLGAARYLTETRNFAGTAVVIFQPAEEGGGGGREMVEDGLMDRFGIGE
                     VFGMHNYPGMPVGSFGIRAGPMMAAADALTIDIEGVGAHAARPHFGVDTVLVGAQIIN
                     AVQSVVSRNVDPLKSAVVSICMFRAGNTDNVIPQTVQLRGTARSLAPEVRDLLEKRLH
                     IVVESTAAAYGAKAKLTYRRGYPVLVNHERQTEFAAAVASQIAGPDKVDTTLPPMMGA
                     EDFSFMLNARPGAFIWVGNGDSAGLHHPSYNFNDDTIPFGTSYWVKLVETALAA"
     gene            complement(1567..>2378)
                     /locus_tag="VIY07_00910"
     CDS             complement(1567..>2378)
                     /locus_tag="VIY07_00910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl transferase family 2"
                     /protein_id="HEY6380344.1"
                     /translation="YTNRRYGRGLLPDSFEAYKKQRHRWAYGGFQILKKHWRRFLPGG
                     SRLTREQKREFALGWLNWLGAESIGVAVAILNIVWVPVVAFLDIAVPDRILTIPIIAS
                     FIVSVAHFATLYRLRVRPRTGQLLGSVLAAMSVQWTVARAVGFGIIKERLPFVRTSKG
                     GIRRSTDFHAFWEAILAGLLVLGAVVLVSTNIKEIREINIFAVVLLIQSLPFVAAVGL
                     SVIERTRLNDFAYWRSLEARVAELLPITRRNATIAEATTTAPAPKPGELVQ"
BASE COUNT          490 a          693 c          751 g          444 t
ORIGIN      
        1 taggcgatta ttagcactgg cctggcaaaa cgacagcgcg aggtgttacc taaggcgtta
       61 cctatgagcg ggcagccaaa gaggactgca agcataagcc cttgattttt atggtgagcg
      121 cgccgggact cgaacccggg acctactgat taaaagtcag ttgctctacc gcctgagcta
      181 cgcgctcgtc accatgcgca aaatactgcc ggtcgatgcg ctgtccatcc cttgaaggct
      241 tgggaacagg cttttaccgg tcgtgcgcga gggccggtgt aggggcggtt ctctgcccgg
      301 tcaataggca gctgcgtgtt cttaaaatgc cgcacggccc aggatttgct acagtcatgg
      361 cgggaccaat actcgtgtcc ggagaatgtc atgcccgtcg ttaaccgggt cgctgatttg
      421 cacgccgaga tcaccacttg gcgacgcgat ctgcacgcac accccgagct gatgttcgat
      481 gtccagcgca cggccggcac ggtcgctgag aagctgaagg cgtttggctg cgacgaggtt
      541 gtgacgggta tcggccgaac cggagtcgta ggggtcattc acggacgcaa aggttccaag
      601 ggaaagacaa ttgggcttcg ggcagacatg gatgcccttc ccatagagga ggccagtgat
      661 ctcgcctaca agtcgacagt acccggaaag atgcatgcat gcggccatga cgggcatacc
      721 gccatgctgc tgggagccgc gcgctacctc acggaaaccc gcaactttgc gggcaccgcg
      781 gtcgtgattt tccagcccgc ggaagagggc ggcggcggcg ggagggaaat ggtcgaggac
      841 gggctgatgg accgcttcgg catcggcgag gtcttcggca tgcataacta tcccggcatg
      901 ccagtcgggt cattcggcat acgggccggt ccgatgatgg ctgcggcgga cgcactcacg
      961 atcgatatag aaggagtagg tgcccacgcc gcgcgccctc atttcggcgt cgatacggtt
     1021 ctggtcggcg cgcagattat taacgcggtt caatccgtcg tctcgcgcaa tgtcgatccg
     1081 ctcaaatcgg cggttgtctc gatctgcatg ttccgcgccg gcaataccga caacgtcata
     1141 ccgcagaccg tacaattgcg ggggaccgcc cgcagtcttg cgcccgaagt gcgggacctg
     1201 ctcgagaagc ggctccatat agtcgtggag agcacggcgg cagcgtatgg ggccaaggcg
     1261 aagctgacct atcgccgcgg gtatccagtg ctggtgaatc atgaacggca gactgagttt
     1321 gccgccgcgg tcgcaagcca gatcgccggc ccggacaagg ttgataccac gctgccaccg
     1381 atgatgggcg cggaagactt ctctttcatg ctgaacgcca ggccaggcgc tttcatctgg
     1441 gtcggcaatg gggacagcgc aggcctgcac catccgtcgt acaactttaa cgacgacacc
     1501 atcccgttcg ggacttcata ttgggtgaag ctggtcgaga cggcactggc cgcctgatcg
     1561 atcgttctac tgcaccagtt cgccgggctt gggcgccggc gcagtggttg ttgcctcggc
     1621 gatcgtcgcg ttccgccgcg tgatcggcag aagttcggca acgcgggcct cgaggctgcg
     1681 ccagtacgcg aaatcgttga ggcgcgtccg ttcgatcacg gacaatccaa cggctgcaac
     1741 gaacggcagg ctttggatca acaacacgac tgcgaagatg tttatttcgc ggatttcctt
     1801 gatgttggtc gaaaccagca cgaccgcgcc gaggaccagc agaccggcga ggattgcctc
     1861 ccagaatgca tggaagtcgg tcgagcgtct gatcccgcct ttcgaggtcc gcacgaaggg
     1921 cagacgctcc ttaatgatgc cgaagccaac cgcgcgtgcg actgtccact gcaccgacat
     1981 cgccgccagc accgatccga gcagctgtcc tgtgcgagga cgaacgcgca gccgataaag
     2041 ggtagcgaag tgggccaccg acacgatgaa gctcgcgatg atcggtatgg tcaggatccg
     2101 gtcgggaacg gcaatgtcga ggaatgccac cacaggcacc cagacaatat tgaggatggc
     2161 aacggccacg ccgatgcttt cggcgccgag ccagtttagc cagccaaggg cgaactcgcg
     2221 cttctgctcg cgggtaaggc ggctgccgcc cggaaggaaa cggcgccaat gctttttcaa
     2281 aatctggaag ccgccgtagg cccaacggtg cctctgcttc ttgtaagctt caaagctgtc
     2341 aggcagcagg ccgcgaccat aacgccggtt ggtataat
//
LOCUS       DATDHO010000051         2062 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_249945, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000051 DATDHO010000000
VERSION     DATDHO010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_249945"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..891)
                     /locus_tag="VIY07_00915"
     CDS             complement(<1..891)
                     /locus_tag="VIY07_00915"
                     /inference="COORDINATES: protein motif:HMM:NF013429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HEY6380345.1"
                     /translation="MHGLTRREFAAALPPLAVAAAQGQTKTARFVKGVCAGIFPREMP
                     YADRCRKAKNAGFDAIEIPLSGELSLSSTPDQLKRLGEAADRAGVKVASLWVSPLSDV
                     PLNSPDPQIRERGIEAINKAVEFATYLDCGALLVVPGRVGSGARFNIGYETTWKRISV
                     ELPKAIPAAQSARVLLTLENVSNRFLVSPLEMRAFVDQFKSPWLQVHFDIGNVMYFGY
                     PQDWILTLGERIQRIHLKDRKVSPSAEAASRSGLLEGDVDWKAVMAALVKVNYRGFMC
                     AEIGHDPSNSSHLADVSAAVD"
     gene            complement(902..1936)
                     /locus_tag="VIY07_00920"
     CDS             complement(902..1936)
                     /locus_tag="VIY07_00920"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6380346.1"
                     /translation="MYGTGIIGVGNRGTSLLKTIVEDPNARVTAVCDIKPDRLDRAAS
                     IASRDNPKTYSDYRKLLEDKSVEAVFISTPCDLHVKMAIAALRAGKHIYCEKPLGITA
                     KSIRDVLRAAKGTNTVFMVGHQRRSDPQLRQVIAKIHEGIAGKVIMMKAQRHSSGDFA
                     HDGQSADWLFDASRSGDVIVENAVHNLDVCNWAAGNRPDQVAGFGGTLLYVNDPPGRT
                     ITDGYTLSYDYANGVKLSFTQLAFHPSSLPFGGQQIHVYCTEGVVDVESATFHPRGRQ
                     SKPVVLAEEINENRERNHIGMFYDCIQRGTKPETDITQGAVAALTSIMGREAYKQKRV
                     VTWKELGVEI"
BASE COUNT          405 a          629 c          573 g          455 t
ORIGIN      
        1 gtcgacggct gccgatacgt ccgccaggtg cgacgaattc gacgggtcgt gaccgatctc
       61 ggcgcacatg aatccgcggt agttcacctt caccagcgca gccatgaccg ctttccagtc
      121 gacgtcgcct tccagcagac cgctcctgct ggcggcttcg gcgctgggcg aaacttttcg
      181 gtccttcagg tgaatgcgct gaatgcgttc tccgagcgtg agaatccagt cctgcgggta
      241 gccgaagtac atgacgttgc caatatcgaa atgcacctgg agccaggggc tcttgaactg
      301 atccacgaat gcgcgcatct cgagggggct caccaggaat ctgttggaaa cgttctcgag
      361 cgtcaacagt accctggcac tctgggcagc cgggatggct ttcggaagtt cgacggagat
      421 gcgcttccac gtggtctcgt agccaatgtt aaaccgcgct ccggaaccta cccggccagg
      481 caccaccagc agcgctccgc aatcgagata cgttgcgaac tccactgcct tgttgatggc
      541 ttcaatgccg cgctcgcgta tctgaggatc ggggctattt aaaggaacat cgctgagcgg
      601 cgatacccag aggcttgcga ccttaacacc cgcgcgatct gcagcttcgc cgaggcgctt
      661 caactggtcg ggcgtcgatg acaggctgag ttcaccggac aacggaatct cgatggcgtc
      721 aaacccggcg ttctttgcct tgcggcatcg gtcggcgtat ggcatttcac gcggaaaaat
      781 accagcacag acgcccttga cgaaccgggc cgttttggtc tgaccttgcg ctgcggcaac
      841 agccagaggc ggcaatgctg ccgcaaattc acgccgcgtg aggccatgca tcgatctcac
      901 ctcagatttc aactccaagc tccttccagg tgactactct cttctgcttg tacgcctcgc
      961 gtcccatgat cgatgtcagc gccgcgaccg cgccctgggt aatgtcggtc tcgggttttg
     1021 tgccgcgctg gatacagtca tagaacatcc ctatatggtt tcgctcccga ttctcattta
     1081 tctcttccgc tagtacaacc ggtttggact gcctcccgcg tggatggaag gtagccgatt
     1141 cgacgtccac tacgccttcc gtacagtaga cgtgaatttg ctgtccaccg aaaggcagac
     1201 tggaaggatg aaacgctagc tgcgtaaatg agagcttcac gccgttcgca tagtcgtagc
     1261 tcaaggtgta cccatccgta atcgtgcggc ccggcggatc gttcacgtac aggagcgttc
     1321 cgccgaatcc cgccacctgg tcgggacggt tgcctgcggc ccaattgcac acgtcgaggt
     1381 tgtggacggc gttctccacg atcacgtcgc cggaccggct ggcgtcgaat aaccagtcgg
     1441 ccgattgtcc gtcgtgagcg aaatcccccg aagaatgccg ttgcgctttc atcatgatca
     1501 ccttgccggc aattccctcg tgaatttttg cgatcacctg tcgaagttgc gggtcggacc
     1561 gcctctggtg gccgaccatg aagaccgtgt tcgtcccttt tgcggcgcgg agcacgtcac
     1621 ggatggattt cgcagtgatg cccagaggtt tctcacaata aatgtgctta ccggcgcgca
     1681 gagccgcgat tgccatcttc acatgtagat cgcatggcgt cgagatgaag acggcctcca
     1741 cgctcttgtc ctccaacagc ttccgatagt cgctgtaggt cttcgggtta tcgcgcgagg
     1801 cgatgctcgc cgcccgatcc agccggtcgg gcttgatgtc gcacaccgcc gtcactctcg
     1861 cattcggatc ctcgacaatg gtcttcaaaa gggaagttcc gcggttgccg acgccgatga
     1921 tgccggttcc gtacactggc tcggccgagg catgcctcga caaaaccccc gcagccaaag
     1981 atccaaataa aaagttccgc ctgagttcgt tcataaatat attcctgtga ctatcgcctg
     2041 gtcaggtcgc gaatccatat at
//
LOCUS       DATDHO010000052         5389 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_101399, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000052 DATDHO010000000
VERSION     DATDHO010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5389
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101399"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..567)
                     /locus_tag="VIY07_00925"
     CDS             complement(<1..567)
                     /locus_tag="VIY07_00925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEY6380347.1"
                     /translation="MLALAAAPLGLRCHVFSPEKDSCAFDVVHAGTCAAYEDETALGR
                     FAGAVDVITYEFENVPAKTAAFLAGRKPVLPDPQVLETTQDRLIEKNFISGLKIATAP
                     FAPVHSATQLEEAIKVVGLPAVLKTRQLGYDGKGQAKIAKGGDAIAAWRSLKNAPSIL
                     EGFIDFEREVSVVAARGRDGKVECFEVTE"
     gene            complement(761..1246)
                     /gene="purE"
                     /locus_tag="VIY07_00930"
     CDS             complement(761..1246)
                     /gene="purE"
                     /locus_tag="VIY07_00930"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018235574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEY6380348.1"
                     /translation="MASKPVAIIMGSQSDWATMKHAAKTLDDLRIGYEARIVSAHRTP
                     KRLYEFASSARKNGFKVIIAGAGGAAHLPGMTASMTPLPVFGVPMNTHALEGKDSLLS
                     IMQMPGGIPVGTLAIGKAGAINAALLAAAVLALSDVKTAKRLDGWRAQQTRSVAKRPK
                     D"
     gene            1370..1972
                     /locus_tag="VIY07_00935"
     CDS             1370..1972
                     /locus_tag="VIY07_00935"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEY6380349.1"
                     /translation="MGLPQAEARPHDEFPPAALLLAEIDRLKREVAIARARIGELEAR
                     ADIDPLLDILNRRGFERELGRAISYVKRYGTQAAIMFIDLDNFKAVNDRHGHVTGDAL
                     LKAVTRELCAHVRASDVVGRIGGDEFGVVIWWVDEPDASAKARELENVIARASVLHGQ
                     VQVRVGASVGAAPLLADATPAEIIAAADRAMYARKQEKSG"
     gene            complement(2002..2208)
                     /locus_tag="VIY07_00940"
     CDS             complement(2002..2208)
                     /locus_tag="VIY07_00940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HEY6380350.1"
                     /translation="MTKDEERALREQLARLLQEHRDLDAAITALVTSPGSDLIQIQRL
                     KKRKLILRDKIRLIEDQLTPDIIA"
     gene            2423..2608
                     /locus_tag="VIY07_00945"
     CDS             2423..2608
                     /locus_tag="VIY07_00945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HEY6380351.1"
                     /translation="MSMQSHLAELERRHQALEDEISECLTHPAVDDLKIVELKRRKLQ
                     VKDEIARLRQNGRASVH"
     gene            2722..3696
                     /locus_tag="VIY07_00950"
     CDS             2722..3696
                     /locus_tag="VIY07_00950"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6380352.1"
                     /translation="MSRLAAVVISAVALMLAVLGASAGADYPVRPVTLVVPYPPGGGV
                     DAMARVVAAKLSDALRQQFIVDNRPGAGGTIGTRAVAQATPDGYTLLLGHTGTISINP
                     SLYAHAGYDPRRDFAPIGLVASMPVALLAHPSFPAKSIAEFIDMARKSPGKFNLGTSA
                     VGTGGYMCAELFKAEAGIDVAIIPYKGTAPVMNDLLGGHVPIAFGVLPPALGNIQAGK
                     LRAIAVTSKTRFSLLPDVPTFDESGMPGFEAVLHYGLLAPAGTPKEIVERLSGQLRKL
                     ADNAEVQKQIHNEGGDPLTSTAAEYAADIDHEEKKWSGLVKRLGLKVE"
     gene            3796..4749
                     /locus_tag="VIY07_00955"
     CDS             3796..4749
                     /locus_tag="VIY07_00955"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6380353.1"
                     /translation="MTFIVLALESASGFARADDYPSRPITLIVPFPPGGSTTVMARIV
                     ADKLSAALGQQIVVENRGGAGGTIGTRVAAKATPDGYTILLSYTATLAIAPAMNANAG
                     YDPRKELTPIGMIGFAPNVLVVHPSLPVRSIAELIAYAKAAPAPLQYGSPGVGTVNHL
                     AGEYLANETAIKLQHVPYKGNGPAVTDLLGGHIPMMFLPIPVAVGNVKAGSLRALAIT
                     SAKRSPLLPDLPTLAESGVAGFDVALRYGLAAPAGTPPTVIARLNKELNAALASEDVK
                     NRLATEGAEALPRTPEAYAADIETDEKKWGGLVRKLGLKGD"
     gene            4875..5189
                     /locus_tag="VIY07_00960"
     CDS             4875..5189
                     /locus_tag="VIY07_00960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380354.1"
                     /translation="MKFRTKSRAFVAAAAIVAAMYAVPAAQAFTIENQGGGGSGQGFL
                     DLDKPAAPPDRQAPVSRFGNENGQTTLKQGNTTFQFGQQRSFGERYNSNNLFNPYARE
                     GR"
     gene            complement(5198..>5389)
                     /locus_tag="VIY07_00965"
     CDS             complement(5198..>5389)
                     /locus_tag="VIY07_00965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEY6380355.1"
                     /translation="QALNIAREIAGLPPESVIAARRLMRGSVEETIARIDEEVEAFKT
                     RLASPEAQKALAAFLNRKR"
BASE COUNT         1085 a         1618 c         1664 g         1022 t
ORIGIN      
        1 ctcggttacc tcaaagcatt cgaccttgcc gtcacgtccc cgtgcagcca ccaccgagac
       61 ctcgcgctcg aaatcgatga acccttccag gatggaaggc gcatttttca gggaacgcca
      121 ggccgcaatt gcatcgccgc ctttggcgat tttcgcttgt cccttaccat cgtaaccaag
      181 ctgccgcgtc ttgagcaccg ccggcaagcc gaccaccttg atagcttctt ccagctgcgt
      241 cgcgctatgg accggggcaa agggggcggt cgcgatcttc aggccgctga taaaattctt
      301 ttcgataagg cgatcctgcg tagtttcgag cacctgcgga tcgggcagca ccggctttcg
      361 tccggcaaga aatgcagcgg tcttcgccgg gacattctcg aattcatagg tgatgacgtc
      421 gactgccccg gcaaaacggc ccagcgctgt ttcgtcctca taggcggcgc atgtcccggc
      481 gtgcaccacg tcgaaagcgc atgagtcctt ttcgggcgaa aaaacgtggc agcgcaatcc
      541 caggggcgcg gcggcaagtg caagcatgcg tgcgagttga ccgccgccga gaatgccgat
      601 ggtcgcgccg ggcttcagca cgtcagtacg ctgataaaga ccatctttcg tccgctcatc
      661 cccgcgcagg tggggaccca gaaaacgaaa cgacgttggc catggattcc cgcgatggcg
      721 ggaatgaacg agccgacggc acggcacaaa taggacatgc tcaatctttc ggtcgcttgg
      781 cgacggatct ggtctgttgc gcacgccagc cgtccagccg tttggcggtc ttgacgtccg
      841 acagcgcgag cacagcggcc gcaagcagcg ccgcgttgat cgctcctgcc ttgccgatgg
      901 cgagagtgcc cacaggaatg ccgcccggca tctgcatgat cgacaggagc gagtccttgc
      961 cttccaaggc gtgggtgttc atcggcacgc caaagaccgg caggggggtc attgacgcgg
     1021 tcatcccggg gagatgggcg gcgccgccgg cgccggcgat aatcaccttg aacccgttct
     1081 tgcgcgcgct gctggcaaat tcgtacagcc gcttgggtgt ccggtgcgcc gaaacgattc
     1141 gtgcctcgta accgattcgc aggtcatcga gagtctttgc ggcgtgcttc atcgtggccc
     1201 agtccgactg gctgcccatg atgatcgcga ccggttttga cgccattttg ctccccgaag
     1261 ccgcaatacc ctgcggaagg aagcagcgga ttataggttg aggctccccg ctggcaaggc
     1321 gaaaggggta ttctctcgcg caaggttaag attcgccgag gggacataca tgggtctgcc
     1381 acaagccgaa gcgcgcccgc acgacgagtt tccgccagca gccttgctgt tggcggaaat
     1441 cgaccggctc aagcgcgagg tcgctattgc gcgtgcgcgc atcggggagc tggaggcgcg
     1501 cgccgacatc gatccattgc tggacattct caaccgccgc ggctttgaac gcgagctcgg
     1561 acgcgcgatc tcttatgtga agcgctacgg cacgcaggcc gcgatcatgt tcattgatct
     1621 tgataacttc aaagcggtca atgaccgcca cggtcatgtc actggcgacg cgctgctaaa
     1681 ggcggtgacg cgtgagctat gcgcgcatgt gcgcgcgtcc gacgtggttg ggcggattgg
     1741 tggcgacgag tttggcgtgg tgatctggtg ggtcgacgag ccggatgcgt cggcgaaggc
     1801 gcgcgagctc gagaacgtga tcgcaagggc cagtgttttg cacggccagg tgcaggtacg
     1861 ggtgggggcg agcgtagggg cggcgcccct tctggcagac gccacgcccg ccgaaatcat
     1921 cgccgctgcg gaccgggcga tgtatgcccg aaagcaggag aaaagcggat aagggcgagt
     1981 ccaggctgcg ttgccgggtt cctaggcaat gatatcaggc gtcagctggt cctcgatgag
     2041 gcggatcttg tcgcgcagga tgagctttcg cttcttgagc cgctgtatct gaataaggtc
     2101 ggagccgggt gaggtaacca gggctgttat ggccgcgtcc aggtcgcggt gctcctgcag
     2161 caggcgcgcc agctgctccc gcaacgcgcg ttcttcgtcc ttggtcattg ccaccgctgg
     2221 tttgtgcctt gccggccgtc tcggcaaaag cgaagcaatt attacgtttt ccacaaggcc
     2281 gttcaagctt acggaaaatc cacgacattc aaaggtttgg gccgatttgc cgcaaaatca
     2341 tgatgggtgt accgtcgcac ttgtggtgag tctgcgctag acttagatcg tggagagcca
     2401 ctgattgagg agacatactg gcatgtcgat gcaatcgcac cttgcggaat tggaaagacg
     2461 acatcaggcg ctcgaagatg aaatcagcga atgcctgacc catcccgcgg tcgatgacct
     2521 aaaaatcgtg gaactcaaac gtcggaaatt acaggtaaag gacgagatcg cacggctgcg
     2581 tcaaaacggc cgggccagcg tgcactgacc gctcgatctc gggcaagttt tgatcacgcc
     2641 gaactcgggg cgtacccggg ttcggctatt tttttgctga aaactccatc gtcattggag
     2701 ttgaaccggg gagagaacgc catgtcccga ttggccgctg tcgtgatctc ggcggttgct
     2761 ctcatgctcg ctgtgctcgg agcgtcggcc ggcgcagatt atcccgtgcg ccctgtcacg
     2821 ctggtcgtgc cctatccacc gggcggaggc gtcgatgcaa tggcacgcgt cgtcgcagcc
     2881 aaactgtcag acgccttgcg tcaacagttc atcgttgaca atcgccctgg cgcaggcggc
     2941 accatcggca cccgcgcggt cgcccaagcc acgccggacg gctatacact gttgctcgga
     3001 cataccggga cgatctcgat caatccgagt ctctacgctc atgccggcta tgacccgcgc
     3061 agggatttcg cgccaatcgg tctcgtcgct tcgatgccgg tggccctgct tgcacatccc
     3121 tcatttccgg caaaatcaat cgccgaattc atcgatatgg ccaggaaatc tcccggcaag
     3181 ttcaacctcg ggacttcggc agtaggcacc ggaggctata tgtgcgccga actgttcaag
     3241 gcagaagcgg gcattgacgt tgcgatcatc ccgtacaagg gcacggcacc ggtcatgaat
     3301 gatctcctgg gcgggcatgt gccgatcgca ttcggcgtgc tgccgccggc cctcggcaat
     3361 atccaggccg gcaagctgcg cgccattgca gtcaccagca agacgcgctt ttcgctgttg
     3421 cccgatgtgc cgacattcga tgaatcggga atgcccgggt tcgaagccgt gctgcactat
     3481 ggcctgctcg cgcctgcggg cacgccaaag gagatcgtcg agcgcctgag cgggcagctg
     3541 cgaaaacttg ccgacaacgc cgaggtgcaa aaacagattc acaacgaagg cggagacccg
     3601 ttgacctcaa cggcagcgga atatgcggcc gacattgacc acgaagaaaa gaaatggagc
     3661 ggcctcgtga aaaggcttgg gcttaaagtc gagtagcgga tgctgaaatc ttctttccac
     3721 ctattcctgc gcaagcgaga atccagaaat gggtccccgc tagcccgggg acgaacgggt
     3781 ttcttttgcg ctgctttgac cttcatagtt ctggcgctcg agagcgcgtc gggtttcgcc
     3841 cgcgcggacg actacccaag ccggccaatc acactgatcg tgccattccc acccggcggc
     3901 agcaccacag tgatggcgcg gatcgtagcc gacaagctct cggcggcgct cggccagcag
     3961 atcgtcgtgg aaaatcgggg cggcgccggt ggcactatcg ggacccgggt tgccgcaaaa
     4021 gccacgcccg acggctacac aattttgctg agctacacgg ccacgcttgc aatcgcgccc
     4081 gcgatgaacg ccaacgccgg ctacgacccg cggaaagagc tgacgccgat cggcatgatc
     4141 gggtttgcgc ccaatgtgct tgtcgtccat ccgtcgctgc cagtccgctc gattgccgaa
     4201 ttgatcgcat acgcgaaggc agcaccggcg ccgttgcaat atggctcgcc cggcgtcggg
     4261 acggtcaatc atttggccgg tgaatatctc gcaaacgaaa ccgccatcaa gctgcagcac
     4321 gtgccgtaca agggtaacgg cccggccgtg accgatttgc tgggcggaca cattccgatg
     4381 atgttccttc cgattcctgt tgcggtcggg aacgtaaagg ccggcagcct gcgcgcgctt
     4441 gcgattacca gcgccaaacg gtcgcccctg ttgccggatc tgccgacgct tgccgagagc
     4501 ggcgtggccg gcttcgacgt ggcgctgcgg tacgggttag ccgctcccgc cggcaccccg
     4561 ccaacggtga tcgcgcgcct aaacaaggaa cttaatgccg cactggccag cgaggatgtg
     4621 aagaaccgcc tcgctaccga gggcgccgaa gccttgccgc ggacccctga ggcctatgcc
     4681 gcagatatcg agacagacga aaagaaatgg ggtgggttgg tgagaaaact aggattgaag
     4741 ggcgactaga gatggaaaat ggccgaccac ggggtgcaaa aaatttctgc tgaaggtaga
     4801 atagcgtatc gccgccaagc agccatattg tgctgctcgg attccggggg acaaaagctt
     4861 ccagcgaggc cgcaatgaaa ttccgaacta aatcacgcgc gttcgtcgct gctgccgcaa
     4921 ttgtcgccgc gatgtatgcg gtgcccgctg cgcaagcctt cacgattgaa aaccagggtg
     4981 gtggcggtag tggccagggc ttcctggacc tggacaagcc agcagcgccg ccggaccgtc
     5041 aagcacctgt gtcccgcttc ggcaacgaaa acggacagac cacgctcaaa cagggcaaca
     5101 caaccttcca gttcggccag cagcgctcgt tcggcgagcg atataattcc aataacctgt
     5161 tcaatcccta cgctcgcgaa ggacgctgag ccgatcgcta acgcttccga ttgaggaaag
     5221 ccgcgagtgc cttttgcgcc tcgggtgaag ccagccgcgt cttgaaggct tcgacctcct
     5281 cgtcgatgcg ggcgatggtc tcctcgacag aaccgcgcat caaacggcgg gcggcgatca
     5341 cgctctcagg cggcaagccg gcaatttcac gcgcaatatt cagagcttg
//
LOCUS       DATDHO010000053         7608 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_447730, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000053 DATDHO010000000
VERSION     DATDHO010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7608
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447730"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1501
                     /locus_tag="VIY07_00970"
     CDS             <1..1501
                     /locus_tag="VIY07_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6380356.1"
                     /translation="YARTLQRVKVADATPTLFLGRAADAEVLLRGIESGAVKKIWPVG
                     VLSPSMADRGQSIRGVPVLGDIDDLERIVADLEGRGDKVRRLVLASSALAPEARPEGI
                     LMRARRLGLNTSRLPALDTDGPAVQLAPVSVEDLLLRPSVKIDYRRLEDFVTGKAIVV
                     TGGGGSIGSEICDRIVTFGAARLLVIEHSEPALHAVMESLKSKQGKAELTGRIADIRD
                     RERITRLIGQFKPDIVFHAAALKHVPMLEQDWDEGIKTNVFGSINVADAAASAGAQAM
                     VMISTDKAIEPVSVLGATKRLAEMYCQALDDEFSRRAGPGQQAMRLISVRFGNVLASN
                     GSVVPKFKAQIEAGGPVTVTHPDMVRYFMTIREACDLVITAATHALGRRDGDESVYVL
                     NMGQPVKIVELAERIIRLSGLEPGNDIEISFTGIRPGERLHEILFARGEETADIGIPG
                     IVAAKPVRPPLDAIRAWVATLERGVARGERTAIYNVLRDAVPEFRGEAA"
     gene            1512..2096
                     /locus_tag="VIY07_00975"
     CDS             1512..2096
                     /locus_tag="VIY07_00975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HEY6380357.1"
                     /translation="MDLDAFFKAEFAEHHDVARRSEQALSGSFAALVRACATSIRGGG
                     KLMFFGNGGSAADAQHLATELTVRYKRDRAAIAAIALTTDSSALTAAGNDLGFERIFA
                     RQIEGLGKPGDVAIAISTSGKSPNVIAALKQARSMGLVTAAFGAKGGGDMAPLADHLL
                     AVPSATTARIQEMHILLGQMLCSALEVQLGLVAE"
     gene            2220..3068
                     /locus_tag="VIY07_00980"
     CDS             2220..3068
                     /locus_tag="VIY07_00980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEY6380358.1"
                     /translation="MDAPILAGDGPKAPAQRANDKSDRHNIQSVDRALYLLETIAEAG
                     GEATLTELATRTGLNISTCHHLLATLIQRGFAAKVPGRRLYALGARILYLGHTCLQVD
                     LPRRAQRYLEAVNRATGETVHLAALQGDAVITLAVREALHAVRVDTGRIGKLEAPHAT
                     SIGKAILAWLPEDEMRRILANGMKRFTDNTITEFPALVESLRIVRRNGYAIDHEEFLP
                     GVICVGAAIRDQAGTVIGAISASTPTMRASEQHVASMRDEIIAATRALSAEFGEPAMQ
                     RPAVAN"
     gene            3107..4276
                     /locus_tag="VIY07_00985"
     CDS             3107..4276
                     /locus_tag="VIY07_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY6380359.1"
                     /translation="MYAPPGVKTNHNEFPIPDSQRTWVLCDPGQLSIAKKPVPVPKKA
                     EVLIRIDAVAICATDLEIIYHGPPAMIQGGMPFNKNFTPGHEYMGRVVALGPGVDEYT
                     IGQRVAVEIHAGCGQCKRCREGMYTSCHNYGLNYGDVDKGHRANGFTTDGGFCEYQVN
                     NINTLVSIPDEMTDEEGTLVVTAGTAMYALTELGGLVAGESVCVTGPGPIGLMAVAVA
                     KALGAQPVILTGTRDNRLKIGLELGADAVVNIRKTPDVVAEVKKLNGGKGVDYVVECS
                     AATSAVNDAVRMVNRGGRVCLAAFAHEEVPVDVAHIVRNNIYVYGIRGEGKSATHRAE
                     AFMKQKRFDATKIHTHTFPLDDLPTAIRYAKDRVEDAIKVVVKAKMNAAHKEAAE"
     gene            4290..5210
                     /locus_tag="VIY07_00990"
     CDS             4290..5210
                     /locus_tag="VIY07_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEY6380360.1"
                     /translation="MLTCDDYLTPASLDEAFNAMAEHRGHYRIVAGATDTLTWAREGR
                     AGDVHIPALIDVTKIPELGELSVDDECVRLGAATPIQRFLDDRSLARALPAMPRCAVW
                     FADDQIRAQATVGGNIVNASPAADATPCLIAHAAEVEVAKKSGGKIVRRRMTLDQFVT
                     GPNRTALEAGELLIAIECDALPGYGGSFEKVGHRRSLVISLVCLAALVKLDAQGQRIE
                     DVRLSIAGIGPKPLRLAEVEKFLRGAAISPQRLEQAADMPASFVASRTRQQYRREVVR
                     GFMLRALINASRSAGADVTMLAPELEVACA"
     gene            5203..7080
                     /locus_tag="VIY07_00995"
     CDS             5203..7080
                     /locus_tag="VIY07_00995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6380361.1"
                     /translation="MPDLQFTATINGRKISRNGKPHQRLLDFIRDDLNLTGNKEGCGA
                     GECGTCSVFVDGVLMKSCLMPLAKAQGKTIETVEALAKTGELSVLQKAFHKAGASQCG
                     YCIPGMVMAATAALRANPFADREEIKERLGGNICRCTGYQKIFDAVELARDVQNGNLP
                     TTALFEDETEEGDFIGKNVRRIDAPSKVSGRLKYAGDMTMPGMLHVQVLRSPHAHARI
                     LSIDTSAAEAMNGVEAVITSADVPGEDGFGVFVNDQPVMARGKVRYVGEAVAAVAAED
                     PLIARRALAAIRVSYEALPAVFDPDEAIGPGAPVLHDYAPDNVTKHIPIRIGDVEKGF
                     AESDLVMEESYSTQPIEHAYLEPEAGLAYVDHDDVVTIVSPDQNVTHHRHMLARIIAK
                     PISKVRFIMSPVGGGFGGKEDMIYQGMLALLAMKTQRPVRLVFTREESIVSTAKRHPS
                     RTVLRMGLTRDGRIRAFQMKMLCDGGAYGLSTEGVMRKAAILAAGPYVIPNVKVDTIG
                     VYTNNTPSGAFRSFGALQTAFATESLLDICAERLGLDPFQIRRINAMRDGALTHTKAK
                     LGSVSLTRALDAVEKASGWETGAPVSRGASRSDLNSEEIRPPCALGARFAAAEKQETA
                     E"
     gene            7086..>7608
                     /locus_tag="VIY07_01000"
     CDS             7086..>7608
                     /locus_tag="VIY07_01000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6380362.1"
                     /translation="MARKRGRGMAACWYGIARTAVIDRAAAWAELDDGGSAKIVTGVT
                     EIGEGILTVLAQIAAHEMGVKPEHVVIGDNDTARAPEASHAGASRQTYMVGNAVALAS
                     REARKRLVEVVADAWGVEADTIRTGNGEIWAEHTNHRMPMGEAVHLSKSRGVVPVGSA
                     SFGTDTTGLDPVDG"
BASE COUNT         1516 a         2319 c         2424 g         1349 t
ORIGIN      
        1 ctatgcgcga acgctgcagc gcgtgaaggt tgccgacgcc actcccacat tgtttctagg
       61 acgcgccgcc gacgcggaag tgttgttgcg cggcatcgaa agcggtgcgg tgaagaagat
      121 ctggccggtt ggcgtgcttt caccgtccat ggccgaccga ggacaatcga tccgcggggt
      181 tcctgtcctg ggcgatatcg acgatctcga gcgcatcgtg gccgatctgg aagggcgcgg
      241 cgacaaggtg agacggcttg tcctggcttc ctcagcgctc gcgccggaag cgcgtccgga
      301 aggaattttg atgcgcgcgc gcaggctcgg cctgaacacg agccgcttgc cggcgctcga
      361 cacggatgga cccgccgtcc agctggcgcc ggtttcggtc gaagatctgc tattgcggcc
      421 cagcgtcaaa atcgactacc ggcggctgga ggatttcgtc accggcaagg caatcgtagt
      481 gaccggcggc ggcggttcga tcggctccga gatctgcgat cgtatcgtga cgtttggcgc
      541 tgcgaggctg ctggtcatcg agcattctga accggcgctg cacgcggtca tggagtctct
      601 aaaaagcaag caaggcaagg ctgagctcac gggtcgcatt gccgatattc gcgaccggga
      661 gcggatcacc aggcttatcg ggcagttcaa gcctgatatc gtcttccatg ccgcggcgct
      721 caagcacgtt ccgatgctgg aacaagactg ggacgagggc atcaagacca atgtcttcgg
      781 ctcgataaat gtcgccgatg ctgctgcgtc ggcaggcgcg caggccatgg tcatgatctc
      841 gacagacaag gcgattgaac cggtgtcggt gcttggcgcc accaagcgcc tggcagaaat
      901 gtactgtcag gcgctcgacg acgaattctc ccgccgtgcc ggcccgggcc agcaggcgat
      961 gcggctgatc tccgtgcggt tcggaaatgt gcttgcctcg aacggttcgg ttgttccgaa
     1021 attcaaggcg caaattgaag cgggcgggcc ggtgaccgtc acgcatcccg acatggtgcg
     1081 gtactttatg accattcgcg aagcgtgcga tttggtcatc acggcggcaa cccatgcgct
     1141 gggcagacgt gacggcgatg aatcggtcta cgttctcaac atgggccagc cggtgaaaat
     1201 cgtcgagctc gccgaacgca tcattcgcct gtcgggcctt gagcccggca acgacatcga
     1261 gatttcgttc acaggcattc gtccgggcga acggttgcac gaaatcctgt tcgcccgcgg
     1321 ggaggagacc gccgacattg gaatcccggg aatcgtggca gccaagccgg ttcggccgcc
     1381 gctcgacgca atccgggcgt gggtcgcaac cttggagcgg ggcgtggccc gtggcgagcg
     1441 cacggcaatc tacaacgtcc tgcgcgacgc ggtgccggaa ttccgcggcg aagcggcttg
     1501 aggaaagcac cgtggatctt gacgcattct tcaaagcgga atttgccgaa caccacgacg
     1561 tggcgcgccg ctcggagcaa gcgttgtcgg ggagcttcgc cgcgctcgtt cgagcctgcg
     1621 cgacgtcaat ccgcggcggc ggcaagctga tgttcttcgg aaatggaggg agcgcggctg
     1681 acgctcagca tctcgcgacc gaactgacgg tccgttacaa gcgagatcgt gccgcgatcg
     1741 ctgcgattgc gctgaccacc gacagctcag cgctcacggc cgcgggcaac gatcttggct
     1801 tcgaacgcat tttcgcgcgc cagatcgagg gattgggaaa gcccggcgat gtcgccatcg
     1861 ccatctcgac gtccggcaaa agtccgaatg tgatcgccgc ccttaaacag gctcggtcga
     1921 tggggctggt caccgccgcg tttggcgcca agggcggcgg cgacatggcc ccgctcgccg
     1981 accatctcct ggcggtgccg tcggcaacga cggcgcgtat tcaggaaatg cacattctgc
     2041 ttggccagat gctttgctcc gcactcgagg tccagcttgg ccttgtggcc gaatgacttg
     2101 agcaaaacct gtctgaaaac cgcccatttt tcataacgcg aaaattacct tctttatcct
     2161 gaaatcgcct tgacttgatc ggtcggggcg ctttcccttg gggcagggag aaaacaacca
     2221 tggacgctcc gattttggcc ggggacggcc ccaaagcgcc tgcgcaacga gcaaacgaca
     2281 agagcgatcg gcacaacatt cagtcggtgg atcgcgcgct ctatttgctg gaaacgatag
     2341 cggaggccgg cggcgaagcg acgctgaccg agctcgccac ccgcacaggc ctcaacattt
     2401 caacatgtca ccatttgctc gcaacgctca tccagcgcgg cttcgccgcg aaggtgccgg
     2461 ggcgccgcct ttacgcgctc ggcgccagaa tcctttatct cggacatacc tgcctgcagg
     2521 tggatctgcc tcgccgcgcg caacgctacc ttgaagcggt caaccgtgcg accggcgaga
     2581 ccgtgcatct cgccgccctg cagggcgacg cagtgatcac actggcggtg cgcgaagctc
     2641 tccatgccgt aagggtcgac accggcagga tcgggaagct tgaggcgcca catgcgacat
     2701 cgatcggcaa ggcaatattg gcctggcttc cggaggacga gatgcgccgg atccttgcca
     2761 acggcatgaa gcgcttcaca gacaatacca tcacggaatt ccccgctctg gtcgaatcgc
     2821 tgcgaattgt tcgtcgcaac ggctacgcca tcgaccatga ggaattcctg ccgggcgtca
     2881 tttgcgtcgg cgcggccatt cgcgaccagg ccggcacagt catcggcgcc atcagcgctt
     2941 caacgccgac catgcgcgcg agcgagcagc acgtcgcctc gatgcgcgac gagatcatag
     3001 ccgcgacgcg tgcgctctcc gctgaattcg gcgagccagc catgcaacga ccagccgtcg
     3061 ccaattgatt gatcggccta tttgacacag ttttttggga ggaatcatgt acgcaccgcc
     3121 cggtgtaaaa accaatcaca acgaatttcc cattcccgat agccagcgta cctgggtgct
     3181 gtgtgatccc ggtcagctct ccattgcgaa aaagccggtc ccggtgccaa agaaagcaga
     3241 agtgctgata cgcatcgatg cggtcgcaat ctgcgcgacg gaccttgaga tcatctatca
     3301 tggcccgccg gccatgatcc aaggcggcat gccattcaat aagaacttca ctcccggcca
     3361 tgaatacatg ggcagggtcg tggcgctcgg gcccggagtc gatgagtaca ctatcggtca
     3421 gcgcgtggca gtcgagattc acgccggttg cggtcagtgc aagcgatgcc gcgaggggat
     3481 gtacacctcg tgccacaact acgggctcaa ttacggtgac gtcgacaaag gccaccgcgc
     3541 caacggattc acgaccgacg gcggtttctg tgaataccag gtgaacaaca tcaatactct
     3601 cgtctcaatt ccggacgaga tgacggatga ggaaggaacg ctcgtcgtta cagccggcac
     3661 tgccatgtat gcgctcaccg agcttggcgg gctggtcgcg ggagaaagcg tctgcgtcac
     3721 cggacctggt ccgatcggcc tcatggccgt tgcagtggca aaggcgctgg gcgcgcagcc
     3781 ggtcatccta acggggacac gcgacaatcg ccttaaaatc ggcctcgaac tgggcgccga
     3841 cgctgtcgtc aatatccgga agacacccga cgtcgttgca gaagtgaaaa agctcaacgg
     3901 cggaaagggc gtcgactatg ttgtcgaatg ctcggcggcg accagtgcag tcaacgacgc
     3961 cgtgcgcatg gtcaaccggg gcgggcgcgt ctgccttgcg gcctttgccc acgaggaagt
     4021 gccggtagac gtggcgcata tcgtgcgcaa caacatctac gtttacggca tccgcggcga
     4081 gggcaagagc gcgacgcatc gcgccgaagc tttcatgaaa cagaagcgct tcgacgcgac
     4141 caagattcac acccacacgt ttccactcga cgatcttccg acggcgatcc ggtatgccaa
     4201 ggacagggtc gaagacgcca tcaaggtcgt tgtgaaagcg aaaatgaacg ccgcgcataa
     4261 ggaagccgcg gaatagcgaa agagcagcaa tgctcacctg cgatgactat ctgacgccgg
     4321 cctcgctcga cgaggcgttc aatgcaatgg ccgaacatcg gggccactat cgcatcgtgg
     4381 cgggcgcgac cgacacgctg acgtgggcgc gcgagggtcg agcgggtgac gtgcacattc
     4441 cggcgctgat cgacgttacg aaaattcccg agctgggcga gctatcggtg gacgacgagt
     4501 gcgtgcggct cggagccgcc acgcctatcc agcgatttct ggatgatcga agcctggctc
     4561 gggcactgcc cgccatgccg cgctgcgcgg tgtggttcgc cgacgaccag attcgcgccc
     4621 aggcgacggt cggcggaaat atcgtgaatg cttcgccggc cgccgatgcg acgccttgcc
     4681 ttatcgcgca cgccgccgag gtcgaagtgg cgaaaaaatc gggtggcaaa atcgtgcgcc
     4741 gccggatgac cctcgatcaa ttcgtgaccg ggccgaaccg caccgcgctc gaggccggtg
     4801 agctgctgat cgcgattgaa tgcgatgcct tgccgggcta cgggggaagt ttcgaaaagg
     4861 tcggtcaccg tcgttcgctg gtgatctcgc tggtctgtct cgcggccctg gtgaagctcg
     4921 acgcgcaagg ccaacgcata gaagacgtgc ggctgtcgat cgccggcatc ggaccgaagc
     4981 cgctgcgact tgccgaagtc gagaagtttc tgagaggggc cgcgatcagt ccgcagcggc
     5041 ttgaacaggc agcagacatg ccggcctcgt ttgtggcttc ccgcactcgg cagcagtatc
     5101 gccgcgaggt cgtgcgagga ttcatgctgc gcgccttgat caatgcctct cgaagtgctg
     5161 gcgcggatgt gacaatgctt gcgcccgaat tggaggtggc ctgtgcctga ccttcaattc
     5221 accgccacca tcaatggccg caagatctca cgcaacggca agccacatca gcgcttgctc
     5281 gatttcatcc gcgacgacct caatctgacc ggcaacaagg aaggctgcgg cgccggcgaa
     5341 tgcggcacgt gctcggtgtt cgtcgacggc gttttgatga aatcctgcct catgccgctc
     5401 gcgaaggcgc aggggaagac catcgaaaca gtcgaggcgc tcgcaaagac cggagagctc
     5461 agcgtattgc aaaaggcttt ccacaaggca ggcgcgagcc agtgcggcta ttgcattccc
     5521 ggcatggtga tggccgcgac ggcggcgctc cgggcaaatc cattcgccga ccgcgaggaa
     5581 atcaaggaac gccttggcgg aaacatctgc cgctgcaccg gttaccagaa gattttcgac
     5641 gccgtcgaac tcgcccgtga cgtgcagaac ggtaacctgc cgacgaccgc ccttttcgaa
     5701 gatgaaaccg aggaaggcga tttcatcggc aagaacgtcc gccgcatcga cgctccaagc
     5761 aaggtctcag gacgccttaa atacgccggc gacatgacaa tgccgggcat gctgcatgtg
     5821 caggtcctgc gctcgccgca tgcccacgcg cgcattcttt ccatcgacac ctcggctgcg
     5881 gaggcgatga acggcgtcga ggccgtcatt accagcgcgg atgtgccggg cgaagatggc
     5941 ttcggcgtgt ttgtgaacga tcaaccggtc atggcgcgcg ggaaggtgcg atatgtcggc
     6001 gaggcggttg ctgcggttgc agccgaagat ccgctcatcg caaggcgcgc actggccgcg
     6061 atcagggtct cgtacgaggc attgccggct gttttcgatc cggacgaggc catcggtccg
     6121 ggcgcgccgg tgctgcacga ttatgcgcct gacaatgtca ccaagcacat tccgatccgg
     6181 atcggcgatg tcgagaaagg cttcgccgaa agcgatctgg tgatggaaga aagctattca
     6241 actcagccga tcgagcatgc ctatctcgag ccggaggctg gccttgccta tgtcgatcat
     6301 gacgacgtgg tgacgatcgt ttcaccggac cagaatgtca cccatcatcg acacatgctg
     6361 gcccgcatta tcgcgaagcc gatcagcaaa gtgcgcttca tcatgagccc cgtcggcggc
     6421 gggttcggcg gcaaggaaga catgatctat cagggcatgc ttgcgctcct tgcgatgaag
     6481 acgcagcggc cggtgcggct ggtgttcacg cgcgaggaat cgattgtatc cacggccaag
     6541 cggcatccct cccgcacagt cctgcgcatg ggcctgaccc gcgacgggcg gatccgcgcg
     6601 ttccagatga aaatgctctg cgatggcggc gcgtacggcc tgtccaccga gggtgtcatg
     6661 cgcaaggccg caattctggc ggcgggccct tatgtcattc ccaacgtcaa ggtcgacacg
     6721 atcggcgttt acaccaacaa cacgccatca ggcgctttcc gctcatttgg cgccctgcag
     6781 acggcgttcg cgaccgaatc ccttctcgac atttgtgccg agcggcttgg actcgatccg
     6841 ttccagatca ggcgcatcaa cgcgatgcgg gatggcgcgc tcacccacac aaaggcgaag
     6901 ctgggttcgg tcagcctgac gcgtgcgctc gacgccgttg aaaaggcttc ggggtgggag
     6961 accggcgcac cggtttcccg gggtgcgagc cgaagcgacc tgaacagtga ggagatccgg
     7021 ccgccctgtg cactgggtgc gcgctttgcg gcggcagaaa aacaggaaac ggcggagtag
     7081 aggctatggc ccgcaaacgc ggacgaggaa tggctgcctg ctggtacggc atcgcgcgga
     7141 cggccgtgat cgatcgcgcc gcggcatggg ccgagctcga tgatggcggc agcgcgaaaa
     7201 tcgtcaccgg cgtcaccgag atcggagagg ggatccttac cgtgctcgcg cagatcgccg
     7261 cgcatgaaat gggcgtgaag cccgagcacg tggtcatcgg cgacaacgac acggcccgtg
     7321 cgccggaagc ctcgcatgcc ggggcgagcc gccagaccta catggtcggc aatgccgtcg
     7381 ccctcgcatc gcgggaagcg cgcaagcggc tggtcgaggt cgtcgcggac gcctggggcg
     7441 tggaagccga caccatccgt accggcaacg gagaaatctg ggccgaacac accaatcacc
     7501 gcatgccgat gggtgaagcc gtgcacctgt cgaagagtcg cggcgtggtg cctgtcggct
     7561 ctgccagttt cggcaccgat accaccggcc tcgatccggt cgacggct
//
LOCUS       DATDHO010000054         4396 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_447732, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000054 DATDHO010000000
VERSION     DATDHO010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4396
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_447732"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..1485
                     /gene="purB"
                     /locus_tag="VIY07_01005"
     CDS             175..1485
                     /gene="purB"
                     /locus_tag="VIY07_01005"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEY6380363.1"
                     /translation="MIPRYTRSEMAAIWEPQTRFRIWFEIEAHAADAMAELGLIPKEA
                     AKAIWDKGRNATFDIARIDAIEGEVKHDVIAFLTHLAEIVGPEARFVHQGMTSSDVLD
                     TCLNVQLVRAADILISDVDALLAALKRRAFEHKLTPTVGRSHGIHAEPTTFGLKLAYA
                     YAEFSRARERLAAARKEVATCAISGAVGTFAQVDPRVEAHVAKAMGLSVEPVSTQIIP
                     RDRHAMYFATLAVVASSIERLATEIRHLQRTEVLEAEEFFSEKQKGSSAMPHKRNPVL
                     SENVTGLARMVRAYALPAMENVALWHERDISHSSVERMIGPDATVTLDFALARLASIV
                     DKLIVYPAAMQKNLDRLGGLIHSQRVLIALTQKGVSREDAYRLVQRNAMKVWNGSESD
                     FLSLLKADKDVRAKLSAAELEANFDLGHHFRHVDTIFKRVFGAA"
     gene            complement(1495..2100)
                     /locus_tag="VIY07_01010"
     CDS             complement(1495..2100)
                     /locus_tag="VIY07_01010"
                     /inference="COORDINATES: protein motif:HMM:NF019844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0070064 - proline-rich region binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEY6380364.1"
                     /translation="MQKKTFSLAVGALLLSASAVSAATLTDNLNLRSGPGLNFDVIGA
                     MPAGSDVRVLNCGPSWCRVVWNDSTGFASRRFISSGGPITAAASSTAVVAPGYDYGYA
                     QTRSSSWAPDARVGYGYAAPPPPVVVAPSNDYGYGYAQTRSSSWAPNPGVVYGYAAPS
                     PPVVVAPSNDYGYAQTRSSSWAPNPGVGYGGWGYSRYYGYR"
     gene            2237..3046
                     /gene="murI"
                     /locus_tag="VIY07_01015"
     CDS             2237..3046
                     /gene="murI"
                     /locus_tag="VIY07_01015"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEY6380365.1"
                     /translation="MPTSAPPAVNSTEPVTVLLFDSGLGGLTVFREVKAARPDARLIY
                     LADDAGFPYGDLVEDKLVGRVTDVLGKAIADHKPDMVVVACNTASTLALVQLRTRFSV
                     PFVGTVPAIKPACAQSKSKRIAVLGTQATVGREYTRALIREFAAGCDVHLVGSPRLAA
                     YAEAELAGKAVDSAAIKAEIADCFIDADSRRTDTIVLACTHYPLLLERFRANAPWPVA
                     WLDPAPAIARRVADLLRERPSTSAHNSSAIEFTSGREPSPALVRALTSFGF"
     gene            complement(3043..3672)
                     /locus_tag="VIY07_01020"
     CDS             complement(3043..3672)
                     /locus_tag="VIY07_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEY6380366.1"
                     /translation="MTEFDFLSHGALAALFQVIMIDLVLAGDNAIVIGLAAAGLPPEK
                     RSRAILVGIIAATLLRLVFAGIALELLEIVGLLLAGGILLLWVCWKMWRDLRGPDRKE
                     TEAALRRQESNVPRKTFAQAAWQIVIADISMSLDNVLAVAGAARDHPFALIFGLGLSI
                     VLMGVAASFIARLLNRHRWIAYVGLAIIFYVAADMIWRGALEVWPHVSD"
     gene            4237..>4396
                     /locus_tag="VIY07_01025"
     CDS             4237..>4396
                     /locus_tag="VIY07_01025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011179373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEY6380367.1"
                     /translation="MTKRMESKYKIDRRMGENIWGRPKSPVNRREYGPGQHGQRRKGK
                     LSDYGVQLR"
BASE COUNT          886 a         1420 c         1300 g          790 t
ORIGIN      
        1 tggcatcgcc gaggtgcatg ctcacaccct gcccgacggc acgacggcgc tcgcgaccgt
       61 gattcaattc ttctacatgt cctatcatgg gccggaccgg cggttcctcg tcgtgacggg
      121 ccgcgcgcct tgaacgcaac cgttcgaaaa attccgaccg catcgaggcc ctgaatgatc
      181 ccgcgttaca cccgttccga gatggcagcg atctgggagc cgcagacccg cttccgcatc
      241 tggttcgaga tcgaggcgca cgccgccgat gccatggcgg agctcgggct catcccgaag
      301 gaggccgcga aagcgatctg ggacaagggt cgcaacgcca ccttcgacat cgcgcgcatc
      361 gatgccatcg aaggcgaggt caagcacgac gtcattgcgt tcctcaccca cctcgccgag
      421 atcgtcgggc ccgaggcgcg cttcgtgcat cagggcatga cctcgtccga cgtgctcgac
      481 acctgcctca acgtgcagct cgtgcgcgcc gccgacatcc tgatttccga tgtggatgcc
      541 ctgctggccg cgctgaagcg ccgcgccttc gagcataaat tgacaccgac cgtcggccgc
      601 tcgcacggca tccatgccga gccgaccacg ttcgggctca aacttgccta tgcctatgcg
      661 gaattttccc gcgcccgcga gcgcttggcg gccgcccgaa aggaagtcgc gacgtgtgcc
      721 atttccggcg ccgtcggcac cttcgcgcag gtcgatccgc gtgtcgaagc gcatgtggcc
      781 aaggccatgg ggcttagcgt cgaacctgtt tcgacccaga tcatcccgcg tgatcggcac
      841 gccatgtatt tcgccacgct ggccgtggtt gcgtcctcta tcgaaaggct cgcgaccgaa
      901 attcggcact tgcagcggac cgaggtgctg gaagccgaag agttcttctc ggagaagcaa
      961 aaaggctcct cggcgatgcc gcacaaacgc aaccctgtgc tgtccgagaa cgtgaccggg
     1021 ctcgctcgaa tggtgcgtgc ctatgcgctg cccgccatgg aaaacgtggc gctttggcac
     1081 gagcgcgaca tttcccattc ctcggtggag cgcatgatcg gccccgatgc caccgtcacg
     1141 ctcgatttcg cgctggcacg gctcgcctcg atcgtcgaca agctcatcgt ctatcccgca
     1201 gccatgcaga agaatcttga ccggctgggc ggcctgattc actcgcagcg ggtgctgatc
     1261 gcgttgacgc aaaagggcgt ttcgcgcgag gacgcctacc gcctcgttca gcgcaacgcg
     1321 atgaaagtat ggaatggcag cgagagtgat tttctctcgc tgcttaaggc cgacaaggac
     1381 gtgcgcgcga agctaagcgc tgcagaactc gaggctaatt tcgacctcgg gcatcacttc
     1441 cgtcacgtcg atacgatctt caagcgcgtc ttcggcgcag cctgaatgtt cgcgtcagcg
     1501 atatccgtag taacggctat acccccagcc gccgtaaccg acgcctggat ttggcgccca
     1561 ggacgaactc cgtgtctggg cgtagccgta gtcgttgcta ggcgcgacca ccacaggagg
     1621 agacggagcc gcgtagccgt aaacaacgcc tggatttggc gcccaggaag aactccgcgt
     1681 ctgagcatag ccgtacccgt agtcgttgct aggcgcgacc actacaggag ggggcggagc
     1741 cgcatagccg taaccgacgc gtgcatccgg agcccaagac gaactccggg tctgggcgta
     1801 gccgtagtcg taaccgggtg cgacaactgc ggtcgaagac gcagccgctg tgattggccc
     1861 gccgctggaa atgaatcttc tgctggcaaa gcccgtgctg tcgttccaga ccacgcggca
     1921 ccacgacggg ccgcaattca aaacgcggac atcggatccc gccggcatcg cgccgataac
     1981 gtcgaagttg aggccgggtc cactacgcag attgagattg tcggtgagtg ttgctgccga
     2041 gaccgcactc gcggaaagca gcagggcgcc gacggcaagt gagaatgtct tcttttgcat
     2101 gtcacatctc tcgagttacc gtccccgcaa caaaacgaca tcgcatcaaa ttgtacgcgc
     2161 agcccttgac caagcccgac cacattcttg tgacccattg tcacaaacgc gcacgcatgt
     2221 cttatctcgt gatcaaatgc ctacttccgc accgcctgcc gtaaactcaa ccgagcccgt
     2281 taccgtcctg cttttcgatt ccggtctcgg cggtctcacg gtattccgag aagtgaaggc
     2341 cgcgcgaccg gacgcgcgat taatatatct cgcggacgat gccggttttc cctacggcga
     2401 tctggtcgaa gacaaactcg tgggacgcgt cactgacgtg ctcggaaagg ccattgccga
     2461 tcacaagccg gacatggtgg tcgtggcttg caacacggcg tccacacttg ctcttgtcca
     2521 gttgcgcacg cgcttctccg tgccctttgt cggcacggtg ccggcaatca agccggcctg
     2581 cgcgcaatca aaaagcaagc gcatcgcggt gctcggcacg caggcgacgg tcggtcgaga
     2641 atataccagg gcattgatcc gcgaatttgc cgctggctgc gatgttcacc tggtgggatc
     2701 gccacgactc gccgcctatg cggaggctga gctggcgggc aaagccgtag acagcgcggc
     2761 aatcaaagct gagattgcgg attgcttcat agatgcagac tcgcgtcgta ccgacacgat
     2821 tgttcttgcc tgcacgcact atccattgtt gctggagcgc ttccgcgcca atgcgccgtg
     2881 gcctgtcgcc tggctcgatc ccgcccccgc gatcgctcgc cgtgttgctg acctgctgcg
     2941 cgagcggcct tcgacctccg cgcacaattc ctcggcgatc gaattcactt ccggccgaga
     3001 accatccccc gctctcgtac gtgcgctgac atcattcggt ttctaatcgg acacatgtgg
     3061 ccacacttcg agcgcgccgc gccaaatcat gtcggcggcc acatagaaga tgatggcgag
     3121 cccgacgtaa gcgatccagc gatggcggtt gagcagccgc gcaataaagc tcgcagcgac
     3181 gcccatcaga acgatggaga gcccaagccc gaagatcagc gcgaacggat ggtcgcgcgc
     3241 cgcgcccgcc accgccaaca cgttgtcgag cgacatggag atgtccgcaa taacgatctg
     3301 ccaggcagcc tgggcgaagg tcttccgggg gacgttgctc tcctgccttc tcagtgcagc
     3361 ctcggtttcc ttccggtccg ggccgcgcaa gtcgcgccac atcttccagc acacccaaag
     3421 cagcaatatt ccgcctgcca aaagcagacc gacaatctcc aggagctcca aggcgatccc
     3481 ggcgaaaaca agtcgcaaca acgtggcagc gataatgccg acgagaatcg cgcgcgagcg
     3541 cttttcgggt ggcaagcccg ccgcggcaag gccgatgaca atcgcattgt cgcccgcgag
     3601 gacgagatcg atcatgatga cctgaaaaag cgcggcgagt gcgccgtgcg aaagaaagtc
     3661 gaactcagtc atccgcttcg ctcctggatg gggccctgtc cgatgaattc gcggacagat
     3721 tcgatctcac gaagaatggt cgcgctgcgc aaaccgacga tggcgaacgc gcccaccaag
     3781 tcccgggttt caaccgatgg ggatgtttcg gaatacagac ggcctgtggc cgccagaaaa
     3841 cggcgacagc caacgcgata tcgtcgtgaa aatctgaacg gcgcattcgg gccctgactg
     3901 cggaacaatc gccatcagtc cgacatcgca gcgtttgggc gctgccagag gggcccggcc
     3961 tgatacctga cttatttgcc caggaacatt ctttcggcaa ggccggtcgg ctgcgaccaa
     4021 gcaccccagc cctcagtcgc taccgtctgg catagggttt gacaggatgg ccgatgatcc
     4081 ctaaaacccg cgcgcccggc ggatttcagg ttcgccgggc gtttcgcgac ccgcggcaag
     4141 gccttgcgct tacgaggttt tgcctgtcgg ttccggccta gctggagcag aggagggcgc
     4201 gatcctcatc aacagcaaag acaaccgagg acgcgaatga ccaagcgcat ggaatccaag
     4261 tacaagatcg accgccggat gggcgaaaac atctggggtc gcccgaaaag cccggtcaac
     4321 cgccgcgaat acggccccgg ccagcacggc cagcgccgca agggcaagct ctccgactac
     4381 ggcgttcagc tgcgcg
//
LOCUS       DATDHO010000055         3900 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_151224, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000055 DATDHO010000000
VERSION     DATDHO010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3900
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151224"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1730)
                     /locus_tag="VIY07_01030"
     CDS             complement(<1..1730)
                     /locus_tag="VIY07_01030"
                     /inference="COORDINATES: protein motif:HMM:NF015155.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEY6380368.1"
                     /translation="MLGSVVTGIVKFCTRFPWPIIVLAVVAGAGSAVYAARNFAINTD
                     INKLISHELDWRKREADFEKAFPGHFGSTLVVVDAPTAEFAVRASAELADKLKSRPEL
                     FQSVDDIEGSEFFARNGLLYRPTEEVANFVKGLGQAAPVVGTLVGDPSLRGLTRMLSL
                     GLVGVQNRMVTLDGLARPLSMASTTLENVLTARPATFSWQAMVNGQDPKPADLRRLIE
                     VQPVLDFSALQPGEASSNAIRQAASDLQLKEKYQARVRLTGSVPMADEEFATVREGAV
                     ENAIGTILVVLVILWLALKSGRLIVAVFITLFVGLAMTAALGLMMVGALNMISVAFAV
                     LFVGIGVDFAIQFSVRYRAERHDKPELHAALAQAAEKIGVPLTLAAAAVAAGFLSFLP
                     TDYRGVSELGAIAGAGMLIAYVTSITLLPALLSVLNPPGEAEPIGYRALAPIDWFIQE
                     YRVPVIVGTLALALAGSPLLYFLTFDFDPIHLRSPQTESISTLLDLRGDPRGGTNSVN
                     IITASVEEASAAADKLQRLPEVLKVTTLLSFIPQDQDKKIELIADFEEQIGPALERPG
                     SAKPPSDAEN"
     gene            1960..>3900
                     /gene="dxs"
                     /locus_tag="VIY07_01035"
     CDS             1960..>3900
                     /gene="dxs"
                     /locus_tag="VIY07_01035"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEY6380369.1"
                     /translation="MTAPNDDFLTKSTTKFLDSIKSPADLRCVNARDLQQVADELRAE
                     TINAVAVTGGHLGASLGVIELTVALHYVFDTPDDKLIWDVGHQAYPHKILTGRRDRIK
                     TLRAGGGLSGFTKRSESEYDCFGAAHSSTSISAGLGMAVARDLAGQKHNVICVIGDGA
                     MSAGMAYEAMNNAGAMNRRLIVILNDNEMSIAPPVGAMSNYLTRLLSSPTYMSIRDIG
                     RQFADRLPKFFKEKAYLAEELARGFVTGGTLFEELGFYYIGIVDGHDLRQLLPVLENV
                     RNADNGPFLVHVRTQKGKGYAPAEASQDKYHGVVKFDVATGKQQKGVSNAPSYTKVFG
                     ESLVKEARKDEKIVAITAAMPGGTGVDIFAKSFPGRAFDVGIAEQHAVTFAAGLATQG
                     YRPFVAIYSTFLQRAYDQVVHDVAIQKLPVRFMMDRAGLVGADGPTHAGSFDLAYLGC
                     LPGFVLMAAADEAELVHMIATAVGIDDCPCAVRYPRGDGVGVVMPEVGMPLEIGKGRI
                     IAQGNTVALLSLGTRLAECTKAAETLAAHGISTTVADARFAKPLDRELILRLAREHEL
                     LITIEEGAIGGFAAHVMQLLSDTGALERSGFKTRSMILPDIFIDHDSPPAMYAKAGLD
                     AAGIVNKVFEVFGRQAPELQPAD"
BASE COUNT          866 a         1139 c         1113 g          782 t
ORIGIN      
        1 atattttcag catcgcttgg cggtttggca gagccgggcc tttccaaggc cgggccaatc
       61 tgctcctcaa agtccgcgat cagctcaatt tttttatcct gatcctgggg tatgaacgag
      121 agcagagtcg ttaccttcaa aacttcgggc agcctttgta gtttatctgc ggctgccgaa
      181 gcctcctcga ccgaggccgt tatgatgttg acggagttag tcccgccccg cggatcgccg
      241 cgcaaatcaa gcaatgtcga aatcgattcg gtttgcgggc tgcgcaaatg aatcgggtcg
      301 aaatcgaatg tgagaaaata gagtaagggc gatcccgcaa gcgccagcgc cagcgtgccg
      361 acaataacag gaacacgata ttcctggata aaccagtcta tcggagcgag cgcacgatac
      421 ccgataggct cggcctcacc cggaggattg agcacagaga gtagagccgg cagcaacgtg
      481 atacttgtca cgtaggcgat taacatgcct gcgccggcga ttgcacccag ctccgagacg
      541 ccacgatagt ccgtgggaag gaatgagaga aaaccggctg ctactgccgc ggccgccaac
      601 gtcaatggga cgcctatttt ttctgcagcc tgggcaagcg cagcatgaag ttcaggcttg
      661 tcatggcgct cggcacgata tcgcaccgaa aactgaatag cgaaatcgac gccgatgccg
      721 acaaacagga cggcgaaggc caccgatatc atgttcagcg cgccaaccat catcaggccg
      781 agcgcggcag tcatcgcaag tcctacgaat agcgtgatga aaactgcgac aataagacgc
      841 cctgatttga gcgcgagcca aaggatcacg agaacgacga ggatggtgcc gatggcattc
      901 tccaccgcgc cctctcgaac agttgcaaat tcttcgtccg ccatcggcac cgaacccgtc
      961 agccgaacac gcgcctggta tttttctttc agctgaagat ccgatgccgc ctgtcggatt
     1021 gcattactcg atgcttcgcc gggctgaagt gcggaaaagt caagcacagg ctggacttcg
     1081 atgagacgcc gaagatcagc cggtttcggg tcctgcccat tcaccatcgc ctgccacgag
     1141 aatgtggcgg gtcgggctgt aagcacattc tccaaagtcg tggaagccat cgataatggg
     1201 cgggccagcc cgtcgagcgt gaccatgcga ttttgcacgc cgaccaagcc caaagagagc
     1261 attcgcgtga gcccacgcaa gctgggatca ccgacaaggg ttccgacgac cggcgccgcc
     1321 tgccccaggc ctttgacgaa attcgccacc tcttccgtcg gccgatacaa caatccgttg
     1381 cgtgcaaaaa attcgctacc ttcaatgtca tccactgact ggaacaattc cggccgggat
     1441 ttgagtttgt ccgccagttc ggcgctggcg cgaaccgcga actcggcggt tggggcatcc
     1501 acaaccacca gagtcgaacc gaaatgcccc gggaaagctt tttcgaaatc cgcctcgcgc
     1561 ttgcgccaat cgagttcgtg cgaaatcagc ttgttgatgt cggtattgat cgcaaaattg
     1621 cgcgccgcat agaccgccga cccggccccc gcaacaaccg ctaacacgat gatcggccaa
     1681 gggaatcgcg tgcagaactt gacgattccg gtaactactg aacctagcat gccaaatgtt
     1741 gccttccggc tacagggagt taccccccac ttgcgctctg atgcaatatt atcaatgctt
     1801 tccgagtgga acttttccac tcgttattga ttgacgcaga ctgagagact tcgtggcaga
     1861 gccggcaaag ctcgtatggg gcgacaaaaa atgttctgag aggttttgcc aacaacgcac
     1921 aagcgcctcc gagttagtag tggggaaggt aattaaagca tgacggcgcc caacgatgac
     1981 ttcctgacaa aatccaccac caaattcctc gactcgatca aaagccctgc agatttgcgc
     2041 tgtgtcaatg cgcgggacct gcagcaggtt gccgatgaat tgcgcgcaga gacgatcaat
     2101 gcggtcgcag ttaccggcgg acacctggga gcaagtctcg gtgtgatcga actgactgtt
     2161 gccctgcatt acgtctttga taccccggat gacaagctga tctgggatgt gggtcatcag
     2221 gcctatccac acaagatcct gaccggccgc agggatcgca tcaagacttt gcgagccggt
     2281 ggcggtctgt ccggcttcac gaaacgctca gagagcgaat acgactgttt tggcgccgcc
     2341 cattcctcaa cgtccatatc ggcaggcttg ggcatggcgg tggcgcgcga cctcgccggt
     2401 caaaaacaca acgtgatctg cgttatcggt gacggcgcca tgtcggcagg catggcttac
     2461 gaagctatga acaatgccgg cgcaatgaat cggcgactga ttgtgatact gaacgacaac
     2521 gagatgtcca ttgcgccacc ggtcggcgcc atgtcgaatt atctcacgcg gctgttgtcg
     2581 agcccgacgt acatgtcgat acgtgacatc ggcagacagt ttgccgatcg ccttccgaag
     2641 ttcttcaaag aaaaggcata cctcgcggaa gaactcgccc gtgggtttgt cacgggcggc
     2701 acactgtttg aagagctcgg tttctattac atcggcatcg tcgatggtca cgatctccgc
     2761 cagctcttgc ctgtcctgga gaatgttcgc aacgccgaca atggtccctt cctcgtgcat
     2821 gtccgtactc agaagggaaa aggctacgca ccggccgaag cgtcacagga taaatatcat
     2881 ggcgttgtga aattcgatgt cgcaacgggc aaacagcaga agggcgtctc aaacgccccg
     2941 tcctacacga aagtgttcgg cgaaagtctg gtgaaggaag cccggaagga cgagaagatt
     3001 gtcgccatta ccgcggcgat gccgggcggc acgggtgtcg atatcttcgc caagtcgttc
     3061 cctgggcgtg ccttcgacgt cggcatcgcc gaacagcatg cggtgacgtt cgcggcaggc
     3121 ctggcgacgc agggttatag gccatttgtc gcgatctatt cgacctttct gcaacgcgcc
     3181 tacgaccagg tcgtgcacga cgttgcgatt cagaaattgc cggtccgctt catgatggac
     3241 cgcgccgggc tggtcggcgc cgacggtccg acccacgccg gctccttcga cctcgcctat
     3301 ctcggctgcc tgcccggctt tgtcctgatg gccgcggccg acgaggccga gcttgtgcac
     3361 atgatagcga ctgccgtggg aatcgatgat tgcccctgcg ccgtgcgcta cccgcgcggc
     3421 gatggcgtcg gtgtcgtaat gcccgaagtc ggtatgccac tcgaaatcgg caaaggccgc
     3481 atcatcgcgc aaggcaatac ggtcgcgttg ttgtcgcttg gcacgcgcct cgccgaatgt
     3541 acgaaagcgg ccgagacgct ggcagctcac ggcatttcaa ccaccgtcgc cgacgctcgt
     3601 ttcgccaagc cgcttgatcg cgagctcatt ctgcggctgg ctcgcgagca tgagctgctc
     3661 ataacgatcg aggaaggcgc catcggcgga tttgccgcgc acgtcatgca attgctgagc
     3721 gacacgggcg cgctcgagcg ttcaggcttc aagacccgca gcatgatttt gccggatatt
     3781 ttcatcgacc acgacagtcc tcccgcgatg tatgccaagg ccgggctcga cgcggcaggc
     3841 attgtcaaca aggtctttga ggtgttcggg cgtcaggcgc cggaattgca acctgccgac
//
LOCUS       DATDHO010000056         3436 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_299702, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000056 DATDHO010000000
VERSION     DATDHO010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3436)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3436)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3436
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_299702"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1253
                     /locus_tag="VIY07_01040"
     CDS             <1..1253
                     /locus_tag="VIY07_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HEY6380370.1"
                     /translation="GIKIRRANAVGDRIFIEGNSAAALGAVYGGATVCAWYPITPSSS
                     LADAFTRHCAKFRVDPDSKKAKYAIIQAEDELASIGIVIGAGWNGARAFTATSGPGIS
                     LMQEFIGLAYFAEIPAVLFDVQRAGPSTGMPTRTQQCDITSCVYASHGDTKHVLLFPE
                     DPAEAFDFGAQAFDLADRLQTPIFVMLDLDIGMNHHLSKPLAWDDSRKYDRGKVMTAA
                     ELEAGKEFGRYLDVDGDGIPYRTYPGTHPTKGSFFTRGTSRDRYARYTEEGAPYVDNM
                     QRLIRKLETAKDMVPRPLIATAGKPTKYGVLYYGSTSPAMDEAIHMIEERGHALDRMR
                     IRAFPFHSSVNSFVADHDFVFVVEQNRDAQMRSLIVNECGIDPVRLVPILHYDGTPIT
                     ARFIAKAIGDHLDKLKVKPMKVTS"
     gene            1250..2305
                     /locus_tag="VIY07_01045"
     CDS             1250..2305
                     /locus_tag="VIY07_01045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HEY6380371.1"
                     /translation="MTYLAKPKFHHPELPKNALGYTHRDYEGTVSTLCAGCGHDSITG
                     AIIQACFELSIEPHRVAKISGIGCSSKTPTYFLGNSHGFNSVHGRMPSVLTGANLANR
                     DLIYLGVSGDGDSASIGLGQFAHCLRRGVNMVYIVENNGVYGLTKGQFSATADRGSKS
                     KRGFINTDNSIDLVAMALQLGASFVARSFSGDKQQLVPIIKAAIAHKGAAFIDVISPC
                     VAFNNHVGSTKSFDFVREHNEAVNRLDFISSRMPIEIKYEPGTVEVVEQHDGSRLALR
                     KLAADYELHDRTAALGFLQHHAAKGQIVTGLLYVEPEAEDLHAHLRTVDAPLNALDEK
                     DLCPGQSVLNKFNDSLR"
     gene            2436..3383
                     /locus_tag="VIY07_01050"
     CDS             2436..3383
                     /locus_tag="VIY07_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012091289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY6380372.1"
                     /translation="MEKRRLGQSDLHLAPIMLGGNVFGWMIDENTSFGILDAFVDAGF
                     NAIDTSDSYARWLPGSPGGESETIIGNWLKRSGKRDRVLIATKVGEDMGEGRSLKKDY
                     ILRECEASLRRLQVDHIDLYQTHFDDEVTEPEETMQAYAQLIAAGKVRVIGASNMTPG
                     RLKASLEASRKLGLPRYESLQPLYNLSDRKEFETQFEPICRQEKLGVINYYSLAAGFL
                     TGKYRSPEEGARHPGRAGRLKRYLDPRGMAILRALDKVAARHAAVPAQIALAWLIAKS
                     TITAPIVSATSRKQLGEILKAPAIRLSSEDIAELDAAGA"
BASE COUNT          706 a         1096 c          981 g          653 t
ORIGIN      
        1 ttggcatcaa gatcagacga gcaaacgccg tcggcgaccg catctttatc gaaggaaatt
       61 cggccgcggc gcttggcgcg gtctatggcg gcgccacagt gtgcgcctgg tatccgatca
      121 cgccctcctc ttcgctcgcg gatgctttta cgaggcattg cgcgaaattc cgtgtcgacc
      181 cggattccaa gaaggcgaag tacgccatta tccaggccga agacgagctc gcctcaatcg
      241 gcatcgtgat tggggcagga tggaacggcg cgcgggcctt taccgcgact tccgggcccg
      301 gcatttctct gatgcaggaa ttcatcggac tcgcctattt cgcggaaatt cctgcggttt
      361 tgttcgacgt ccagcgcgcc ggtccctcga ccggcatgcc gacccgcacg cagcagtgcg
      421 atatcaccag ctgcgtgtac gcctcgcatg gcgataccaa gcacgtcctg ctgttccccg
      481 aagatcctgc cgaggcgttc gatttcgggg cgcaggcctt cgatctcgcc gaccgcctgc
      541 agacgccgat ctttgtcatg ctcgatctcg atatcggcat gaaccaccac ctttccaagc
      601 cgctggcatg ggacgactcg cgcaaatacg accgcggcaa ggtcatgacg gcggcagaac
      661 tggaagccgg caaggaattc ggccgctacc tcgatgtcga cggtgacggc atcccttacc
      721 gcacctatcc tggcacccat ccgaccaaag gctcgttctt tacgcgcggg acctcgcgcg
      781 accggtatgc gcgctacacc gaggagggcg cgccatacgt cgacaacatg cagcggctga
      841 tccgcaaact cgaaaccgcc aaggacatgg tgccgcgacc gctgattgcg actgcgggaa
      901 agccgacaaa atacggcgtg ctttattacg gctcgacctc gccggccatg gacgaggcaa
      961 tccacatgat cgaggagcgc ggccatgcgc tcgatcgcat gcgcatccgc gcctttccgt
     1021 tccactcgag cgtcaacagc tttgtcgcgg accatgattt tgtattcgtg gtcgagcaga
     1081 accgcgacgc acagatgcgc tcgctgatcg tcaacgaatg cggcatcgat ccggtacggc
     1141 ttgttccgat ccttcattat gacggcacgc cgatcaccgc ccgtttcata gccaaggcaa
     1201 tcggcgatca tctcgacaag ctcaaggtga agccgatgaa ggtgacgtca tgacctatct
     1261 cgccaagccc aagtttcatc atcctgagct gccgaaaaat gcgctcggct atacgcatcg
     1321 cgactacgag ggcacggtct ccacgctctg cgccggctgc ggccacgatt ccattacggg
     1381 cgccatcatt caggcctgct ttgagctgtc cattgaaccg catcgcgtcg caaagatttc
     1441 cggcatcggc tgctcgtcaa aaacgccgac ctatttcctc ggtaattcgc acggcttcaa
     1501 ctcggtgcac ggccggatgc cctcggtgct caccggggca aaccttgcca atcgggatct
     1561 gatctatctc ggagtgtccg gcgacggcga cagtgcctcg atcggactcg gccagtttgc
     1621 ccattgcctg cgccgtggcg tgaacatggt ctatatcgtc gagaacaatg gcgtctacgg
     1681 cctgaccaaa ggccagttct ccgccaccgc cgaccgcggg tcgaagtcaa agcgcggctt
     1741 tatcaatacc gacaattcta ttgatctggt ggccatggcg ctccagcttg gcgcgtcgtt
     1801 cgtcgcacgc tccttttccg gcgacaagca gcagcttgtc ccgatcataa aggccgcgat
     1861 cgcgcacaag ggcgcggctt tcatcgacgt catctcgccc tgcgtcgcct tcaacaatca
     1921 cgttggctca accaagagct tcgattttgt ccgcgagcac aatgaagcgg tcaatcggct
     1981 cgatttcatc tcgagccgca tgccgattga aatcaaatac gagcccggta cggtcgaagt
     2041 cgtcgagcag catgacggct cgaggctcgc attgcgcaag ctcgccgccg actacgaact
     2101 gcacgaccga accgcggccc tgggatttct ccagcaccac gccgccaagg ggcaaatcgt
     2161 caccggcctg ctttatgtcg aaccggaggc cgaggatctg catgcgcatc tgcggacggt
     2221 cgatgcgccg ctgaatgcac tcgacgaaaa ggatctttgc cccggccaat cggtgctcaa
     2281 caagttcaac gacagtcttc gttaacatcg gtccgacaga gaacctggtc atggccgggc
     2341 tggtcccggc catgacgctt aggctggcgg tgcattcctg agcggatgcc acggcacaag
     2401 tcgggacatg acacaaacct ggatgaaggc tcttcatgga aaagcgccgc ctcgggcaat
     2461 ccgacctcca cctcgctccc atcatgctgg gcggcaatgt ttttggctgg atgatcgacg
     2521 agaacacgtc attcggcatc ctcgatgctt tcgtcgatgc cggcttcaat gccatcgaca
     2581 cctccgacag ctacgcgcgc tggctccccg gcagcccggg aggtgaatcg gaaacgatta
     2641 ttggcaactg gctgaagcgc agcggcaaac gcgacagggt tctgattgcc accaaggtcg
     2701 gcgaggacat gggtgaaggc cgcagcctga agaaggacta tatcctgcgc gagtgcgagg
     2761 cctcgctgcg acggctgcaa gtcgatcata tcgatcttta ccagacccat ttcgacgacg
     2821 aggtcaccga gccggaagag acgatgcagg cctacgcgca gctgatcgcc gccggcaaag
     2881 tacgcgtgat cggcgcctcc aatatgactc ctggccggct taaggcttca ctcgaggcga
     2941 gcaggaaact cggcttgccg cgctacgaga gcctgcagcc actctataat ctttccgacc
     3001 gcaaggagtt cgaaacccag ttcgagccga tctgccggca ggagaagctg ggcgtcatca
     3061 actattattc gctcgccgcc ggattcctga caggaaaata tcgatcgccg gaagaaggcg
     3121 cccgccaccc cggacgcgca ggacggctca agcgttatct tgacccgcgt ggcatggcca
     3181 tcctgcgcgc actcgacaag gtagcggcac gccatgcggc ggttccggcc cagatcgcac
     3241 ttgcctggct gatcgccaaa tccaccatca ccgcgccgat tgtcagcgcc accagccgca
     3301 agcagctcgg cgagatcttg aaagcaccgg caatcaggct ttcaagcgag gacatcgcag
     3361 agctcgatgc ggctggcgca tgagctacga attgcggaac ccgcgccgct gagcggcgtt
     3421 gatggcggca tgcgtg
//
LOCUS       DATDHO010000057         2464 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_250082, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000057 DATDHO010000000
VERSION     DATDHO010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_250082"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(3..692)
                     /locus_tag="VIY07_01055"
     CDS             complement(3..692)
                     /locus_tag="VIY07_01055"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY6380373.1"
                     /translation="MSNTVRIATFLSMNTFADLIISHYERHAAAWDAERARSVWNDKF
                     SHDRFIEMLPRDAAVLDLGCGSGFPVGQHMAAHGLRITGVDSSPTLISFCRTRLPAHD
                     WIVCDMRSLSLKRSFQGILAWDSFFHLNHRDQRQMFDVFAAHAAPGAVLMFIAGPQFG
                     EAIGNFRGDPLYHASLDAAEYADLLDKIGFEIVSHVVEDSLAGGRTVWLASSRNSFTR
                     QESALREPSVR"
     gene            989..1501
                     /locus_tag="VIY07_01060"
     CDS             989..1501
                     /locus_tag="VIY07_01060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BA14K family protein"
                     /protein_id="HEY6380374.1"
                     /translation="MSKTITKLIAAAFISVVVPSYASTAAAAPAGGALAIKNAASSNI
                     EHVRWGWRGGGWGWGRGWGWGGVGAGIAAGALIGGALAAPYYYGGYYGGPYYYASPSY
                     ADPYYVVDDSYYSEPIGGGAYYGSSPYYRGAYARAGNADVNYCARRYRSYDPRSGTFL
                     GNDGRRHPCP"
     gene            complement(1630..>2464)
                     /locus_tag="VIY07_01065"
     CDS             complement(1630..>2464)
                     /locus_tag="VIY07_01065"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6380375.1"
                     /translation="EIAKDAWPVSIDIPEFELALVNLVVNARDAMPDGGSIVVAAENV
                     TLRGEETVEGLKGEFVALSVTDMGTGIPAELLSKIFEPFFTTKSPDKGTGLGLSQTYG
                     FAQQSGGAVVVSSTVGQGTRVMLYLPRSRAPVTFVTANETAGQAQGRGETVLIVEDNP
                     DVKAVAITLLEQLNYRTTAVDNAEAALNFLSNGTQVDLVFSDVMLPGNLDGLALAEVI
                     KRKFPNLPVLLTSGYAKALAGRHGVPILRKPYQVAALAEAVRSTLHSRAAGDPDQGRL
                     L"
BASE COUNT          557 a          692 c          720 g          495 t
ORIGIN      
        1 ggtcagcgca ccgacggctc ccgcaacgcc gattcctgcc gagtgaagct atttcgtgaa
       61 gacgccagcc atacggttct tccgccggcc agcgaatcct caaccacatg gctcacgatc
      121 tcgaacccaa tcttgtccag cagatcagca tattccgcag catcgaggct tgcgtggtag
      181 agcggatcac cgcgaaaatt gccaatcgcc tcgccaaatt gtggaccggc aatgaacatc
      241 aggaccgcac caggggcagc atgcgcagca aacacgtcga acatctgccg ctgatcgcga
      301 tggttgagat gaaaaaagct gtcccaggcg aggataccct ggaatgaccg cttcagtgac
      361 agtgagcgca tatcgcagac gatccaatcg tgtgcaggca ggcgggtgcg gcaaaacgag
      421 atcaaggtcg gggaggaatc tacacccgtg attctcagcc cgtgcgcggc catgtgctgg
      481 ccgaccggaa aaccagaccc gcaaccaaga tcaaggacgg ctgcatctcg tggcaacatc
      541 tcgataaatc gatcgtgcga gaacttatcg ttccagacgc tgcgggcgcg ctctgcatcc
      601 cacgcggcgg catggcgctc atagtgactg ataatgaggt cggcaaaagt gttcattgaa
      661 agaaaagtgg caatgcggac agtgttgctc aagaacaaac cccggccggg tttgttcgca
      721 gcgctacttg cgcctttagt cgtgtgtcca gccgcggcgc aatttcaaac cgcacgtttg
      781 gattggaacc cggccgagta ttggccatcc acattgatat ctttcaacgc cacaatttga
      841 tgcacccatg attaccgggg tggagtggac caaagtccac ttcgcctctc gcgcaaccgg
      901 tctagattag gatgggagca cggcaaaaaa agccgaaaga cccatgaaga catagccgac
      961 agacaccatt caaaactgag gaacagccat gtctaaaacc atcacgaagt tgatagcggc
     1021 agccttcatc agcgttgttg tgccgtcgta tgccagcacc gcagcggcgg cgcctgccgg
     1081 aggtgctctc gctatcaaga acgcagcctc gagcaatatc gaacatgtgc gttggggctg
     1141 gcgtggagga ggatgggggt ggggccgagg ttggggctgg ggtggtgttg gcgcgggaat
     1201 cgccgcgggt gcgcttatcg gtggagcgct ggccgcaccg tattactacg gcggctacta
     1261 tggtgggccg tactactacg cgagtccctc ctatgcagac ccgtattatg tggtggacga
     1321 ctcatactac tccgagccca tcggtggtgg tgcgtactat ggcagctctc catactatcg
     1381 cggagcttac gcgcgtgctg gaaacgccga cgtgaattat tgcgcgcgca ggtacaggtc
     1441 ctacgatccg cgtagcggaa cctttcttgg aaacgatgga cgtcgtcatc cttgtccatg
     1501 agagggatcc gaaacaaaaa ccccggcgca agccggggtt ttcattttga cggtagactt
     1561 cgcttattcg cagaatttgc atggagtcgc ggctatagac cggctgcgcc aggacacgct
     1621 cgaattgcgc taaagtagcc ggccttggtc ggggtcgcct gctgcgcgcg aatgaagcgt
     1681 cgatcggacc gcttccgcaa gggccgcaac ttggtagggc ttgcgcaaga tcggcacccc
     1741 gtgacggccc gcaagcgcct tggcataccc gcttgtgagc agcaccggaa ggttgggaaa
     1801 ctttctttta attacctctg cgagcgccaa cccatcgagg ttgcctggca gcataacgtc
     1861 agaaaataca aggtcgactt gagttccatt agaaaggaaa ttgagcgccg cctcggcatt
     1921 atcgaccgcg gtcgtgcggt aattgagctg ctccagcaat gtaatcgcaa cggcctttac
     1981 gtccgggtta tcttcgacaa tgaggacggt ttcgccccga ccttgcgcct gaccggcagt
     2041 ttcgtttgct gtgacgaagg tcacgggagc acgactgcgc ggcaagtaca gcatcactcg
     2101 cgttccctgg ccgacggtgc tggaaacgac gacagcgccg cctgattgtt gggcgaagcc
     2161 ataggtctgt gagaggccaa gacccgttcc cttgtcggga ctctttgtgg tgaaaaacgg
     2221 ctcaaaaatt ttggacaaaa gctccgcagg aatacctgtt cccatatcgg tgacggaaag
     2281 cgcgacgaat tcacctttga gtccttcgac ggtttcctca ccgcgcagtg tgacattctc
     2341 tgctgcaaca acgatcgagc cgccgtcagg catcgcgtcg cgtgcattca ccacaagatt
     2401 gaccagcgcg agctcaaatt cggggatgtc gatcgaaacg ggccaagcgt ccttggcgat
     2461 ctcg
//
LOCUS       DATDHO010000058         3579 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_398657, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000058 DATDHO010000000
VERSION     DATDHO010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3579)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3579)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3579
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_398657"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..530)
                     /locus_tag="VIY07_01070"
     CDS             complement(66..530)
                     /locus_tag="VIY07_01070"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEY6380376.1"
                     /translation="MNSDVAKDWSLHTQLAQDTVPIGDLPLARVLLANDANYPWLILV
                     PRLPGLVELIDLEDNAQVQLLGEIAAAANALKTVTRCDKLNIAALGNQVPQLHVHIIA
                     RRHTDAAWPKPVWGMKPPISYEQGQQTILIDALRQLLKPRGIVALDRKIHDD"
     gene            624..719
                     /gene="ffs"
                     /locus_tag="VIY07_01075"
     ncRNA           624..719
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VIY07_01075"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            780..2558
                     /locus_tag="VIY07_01080"
     CDS             780..2558
                     /locus_tag="VIY07_01080"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEY6380377.1"
                     /translation="MSEPEKSAVTGSAAAEASVDRYRVLARKYRPASFDDLIGQDAMV
                     RTISNAFDSGRIPQAWILTGVRGVGKTTTARILARALNYELPDGSVTEPTVRMPVMGL
                     HCQAIIESRHPDVLEMDAASHNSVEDVRQINDAIRYAPMSARYKVYILDEVHMLSGAA
                     FNALLKTLEEPPPHAKFIFATTEIRKVPVTVLSRCQRFDMRRVDAATLIKHLESIASK
                     EKVETEPAALALIARAAEGSVRDSLSLFDQAVAHAAGPVRAEDVRQMLGLADRVRVVD
                     LFEALMKGDVAAALRELRDQYDSGADPAVVLSDLAEFTHFVTRVKVVPAVADDVSLSE
                     AERTRGRAFAAQLSMRVLSRAWQMLLKGIAEVHESGRPVAAAEMVLVRIAYAADLPTP
                     DEVVRSLSENASARPQGSGSSAQPESYTARYEAPRGSPRSSAVVSPRPTDEPIARAEQ
                     AAAISTLAIGSFEELIALAAEKRDIAVKMALERDVRLVRCEDGQLEIALEASAMKTLV
                     HDLQRKLAGWTGKRWIVVVSKEQGAPTLRAQAEAQQAEIERGVQRDPLVQAVLSRFPG
                     AKIVGVTQNSEAADAIPDVSSDSEDQ"
     gene            2560..2880
                     /locus_tag="VIY07_01085"
     CDS             2560..2880
                     /locus_tag="VIY07_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEY6380378.1"
                     /translation="MPDFLGLMKQAAQLQSKMQAMQAELDQIEVEGTAGGGMLTVILT
                     AKGDLKGIRIDDSLLKPSEKEILEDLLVAAHADARRKAEVVLQEKMKSLTGGLPLPPG
                     LGLG"
     gene            2948..3553
                     /gene="recR"
                     /locus_tag="VIY07_01090"
     CDS             2948..3553
                     /gene="recR"
                     /locus_tag="VIY07_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HEY6380379.1"
                     /translation="MPAAVAGPEIERLIQLLARLPGLGPRSARRAALHLIKKRELLMA
                     PLAAALETAMEKIEICKICGNIDTQNPCTVCTDAKRDASIIVVVADVADLWALERAHA
                     INGRYHVLGGTLSPLDGVGPQDLTIETLVSRAHETSVEEIILALNATVDGQTTAHYIT
                     ELLQDANVKVTRLAHGVPVGGELDYLDEGTLAAAIKQRTLF"
BASE COUNT          695 a         1045 c         1149 g          690 t
ORIGIN      
        1 atggcgtggt cagcatcaga tcgccaaacc gtcgcagcga gatcacaagg attcgggatg
       61 gcgtctcagt catcgtgaat tttgcggtcc aacgcaacga ttccgcgggg tttgagcagc
      121 tgccgcaatg catcgatcaa aattgtctgc tggccttgct cataggagat tggcggcttc
      181 ataccccaga ccggcttggg ccaagcggcg tccgtgtgcc gacgcgcgat gatgtgcacg
      241 tgcagctgcg gcacctggtt gcccaaagcg gcgatgttga gcttgtcgca tcgcgtgacg
      301 gtcttgagcg cattcgcggc cgccgcgatc tcgccaagca attgcacttg cgcgttatcc
      361 tcgagatcga tgagctcgac cagtccgggc agtcgaggca cgaggatcag ccatgggtag
      421 ttcgcgtcgt ttgccagaag gacgcgcgcg agggggaggt cgccgatggg aactgtgtct
      481 tgcgcgagct gggtatgcag cgaccaatcc tttgcaacat ctgaattcat tggatgattc
      541 cgcgggattc tttcggagga aagctagcag acccatcgcc gggctgcttg ctttcccgcg
      601 ccattggtcc gatatagaac ctgggaggtt ggcggtggac gagccactcg ccaaccgggt
      661 caggtccgga aggaagcagc cctaacgagc gcggttcggg tcgctcgtca gcctcccacc
      721 aattccccga ttcgttcgga atagcccgcg cttcgcgcgg cagcgaagcg gatggcacca
      781 tgagcgagcc tgaaaaatcc gccgttaccg gttccgctgc ggccgaggcg tcggtcgacc
      841 gatatcgcgt gctcgcgcgc aaatatcgtc ccgcgagctt cgacgatctc attggtcagg
      901 atgccatggt gcggacgatt tcgaatgcat tcgacagcgg acgtattccg caagcatgga
      961 tcctcaccgg tgtgcgcggt gtcggcaaga cgacgacagc gcgcattttg gcgcgtgcgc
     1021 tgaattacga attgcctgat ggttcagtga ccgaacccac ggtcaggatg ccggtcatgg
     1081 gcttgcattg tcaggctatc atcgagagcc gccatcccga cgtgctggaa atggacgccg
     1141 cgtcccacaa tagcgtggag gacgtgaggc agatcaacga cgctatccgc tatgcgccga
     1201 tgagcgcgcg gtacaaggtt tacattctcg atgaagtgca catgctttcc ggtgccgcat
     1261 tcaatgcgct ccttaagacc ctcgaagagc cgccgccgca tgccaagttc atttttgcca
     1321 ccaccgaaat ccgcaaggtg cccgtaaccg tcctgtcgcg ctgccagcgg tttgacatgc
     1381 gccgcgtgga tgccgctacg ttgatcaagc atcttgagag catcgcgtcg aaggaaaaag
     1441 tggagaccga gccggcggca ctcgccctga ttgcgcgcgc agcggaaggc tcggtgcgcg
     1501 actcactttc gctgttcgac caggcggttg cccacgccgc cggaccggtg cgtgccgaag
     1561 atgttcgaca gatgctgggt ctggccgatc gggtgcgcgt tgtcgatctt ttcgaggcgt
     1621 tgatgaaagg cgatgtcgcc gccgccttga gggagcttcg tgatcaatat gacagcggcg
     1681 ccgatcccgc ggtcgtcctc agcgatctcg ccgaattcac gcattttgtc acgcgcgtca
     1741 aggtcgttcc cgcggttgcg gacgatgttt cgctttccga ggccgagcgc acgcgcggcc
     1801 gcgcgtttgc agcgcaactg tcgatgcgcg tgctttccag agcctggcag atgttgctga
     1861 aagggattgc cgaagtgcat gaatccggtc ggcccgttgc cgccgcagag atggttctgg
     1921 tgcgaattgc atatgccgcc gacctgccga cgccggatga ggtggtgcgc tcgctgagcg
     1981 agaatgcttc cgcgcgtccg cagggcagtg gcagctccgc ccagccggag agctatacgg
     2041 cccgatatga ggcgcctcgc ggctcgccac ggtcatcggc ggtggtgtcg ccgcgtccga
     2101 ccgacgagcc gatcgcaagg gccgaacaag cggcggcgat atctacgctt gccattggtt
     2161 cattcgagga gttgattgcg ctggctgcag aaaaacgcga catcgccgtg aaaatggcgc
     2221 tcgaacgcga tgtccggctg gtgcgctgcg aggacggcca actcgagatt gcgcttgagg
     2281 cgagcgcgat gaaaacgctg gtgcatgatc tgcagcggaa gttggccggc tggaccggca
     2341 agcggtggat cgtcgtcgtg tccaaggaac agggcgcgcc cacccttcgt gcgcaggcgg
     2401 aagcccagca ggcggagatc gagcgcggcg tgcaaagaga tccgctggtc caggccgtgc
     2461 taagccggtt tccgggcgcg aaaatcgtcg gtgtgacgca gaactctgaa gccgcggacg
     2521 ctatccctga tgtttcctcc gacagcgagg accaatgaca tgccggattt tcttggcctg
     2581 atgaaacagg cagcgcagtt gcagtccaag atgcaggcca tgcaagccga actcgaccag
     2641 attgaggtcg aaggaactgc cggcgggggc atgctcactg tcatcttgac tgcgaagggt
     2701 gacctcaagg ggatcagaat cgacgattcc ctgctcaagc cttcagaaaa ggaaatcctt
     2761 gaagaccttt tggtcgctgc acacgccgac gcacggcgta aggcagaggt cgtgttgcag
     2821 gaaaagatga agtcccttac tggcggtttg ccgctgccgc ccggattagg attgggatga
     2881 gcaaggttcg ggagaatccc gtggcaggtg gatggcccgg acaagcccgg ccatgacgga
     2941 ttagtccatg cccgccgccg ttgccggacc tgagatcgag cgcctgattc aattgctggc
     3001 gcggctgccg ggcttaggtc cccgttcggc gaggcgcgcg gcgctgcatc tcattaaaaa
     3061 acgcgagttg ctgatggctc cgctcgccgc cgcgctcgag acggcgatgg aaaaaataga
     3121 aatatgcaaa atctgcggca atatcgacac acagaatccc tgcacagtct gcaccgatgc
     3181 caagcgcgat gcttccatca tcgtggtcgt cgccgacgtt gctgatctct gggcgctcga
     3241 gcgcgcgcac gcgataaacg gccgctatca cgtgctgggc gggacgctgt cgccgcttga
     3301 cggtgtcggt ccccaggacc tcacgatcga aacgctggtt tcgcgcgcgc acgaaacgtc
     3361 cgtggaggaa atcattcttg cgctcaatgc caccgtcgac ggccagacca cggcacacta
     3421 cattaccgaa ctgttgcagg acgcgaacgt gaaagtaacg cggcttgcgc atggcgtgcc
     3481 ggtcggcggc gagctcgact atcttgatga aggcacgctc gccgcggcga tcaagcagcg
     3541 aacgctgttc tagcctcagc tgcgagatca ggctcttct
//
LOCUS       DATDHO010000059         6359 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_200791, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000059 DATDHO010000000
VERSION     DATDHO010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6359
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_200791"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="VIY07_01095"
     CDS             complement(<1..314)
                     /locus_tag="VIY07_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018460073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HEY6380380.1"
                     /translation="MFDLSSQDWTAVALSLRVAAISTLVALPFGIAIAVLLARGSFWG
                     KSLLDAIVHMPLVLPPVVTGYLLLISFGRKAPLGAFLADHFGIVFSFRWTGAALACGI
                     MA"
     gene            complement(331..1116)
                     /gene="modA"
                     /locus_tag="VIY07_01100"
     CDS             complement(331..1116)
                     /gene="modA"
                     /locus_tag="VIY07_01100"
                     /EC_number="7.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY6380381.1"
                     /translation="MLTRFLVFFSLAGALAGAPQPVIAQEQVTVFAAASLKNALDDTN
                     AAFTRATGIKVVVSYEASSALARQIEQGAPADVFISADLRWRDYVAERKLINPNTRVN
                     LLGNKLVLIAPADSKLGHVTIGQGFDIAKLAGDGRIAVADVKAVPAGLYARAALEKLG
                     AWAAADPKLAQAENVRATLAFVARGETPIGIVYETDARIEPKVKTIGIFPDDSYPPVT
                     YPVAATVRARNVAVGQYFSFLRTPAAKTIFEKYGFSFLIKPVS"
     gene            1274..2902
                     /locus_tag="VIY07_01105"
     CDS             1274..2902
                     /locus_tag="VIY07_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6380382.1"
                     /translation="MANATRIEGDFDYIVVGAGSAGCVLANRLSADPTKRVLLLEAGG
                     KDNWIWLHIPVGYLFAIGNPRADWLLKTEPEPGLNGRSLNYPRGKVVGGSSAINGMIY
                     MLGQSGDYDHWRQLGLPGWSWDDVRPYFRRHVDHFLKSEHHGIGGEWRVEYPRLNWEI
                     LDAFRAAANQYGIPTVEDFNTGDNEGICYFHVNQKRGRRWSAARGFLKPVLHRPNLRL
                     ETGCLVEAVELNGTRATSVRWRQNGELRSAQCRGEVILAAGAIGSPHIMMLSGIGPAA
                     QLAHFGIPVVLDKPGVGANLHDHLQLRMVFKVSGVKTLNETYARMFNRFSMGVDYALR
                     RRGPMTMAPSQLGAFTKSDPSQSTANIQYHVQPLSLDRFGEPLHSFPAFTASVANVRP
                     TSRGTLTLKSNDPAQAPAISPNYLATPEDQRVAADSIRVTRRIVAQPALQKYSPIEYL
                     PGASVRDDDEEALVKAAGDIGTTIFHPVGTARMGRDDDPKAVVDARLRVIGIDGLRIV
                     DASAMPSITSGNTNSPTMMIAEKGAAMILEDQKT"
     gene            2928..3482
                     /locus_tag="VIY07_01110"
     CDS             2928..3482
                     /locus_tag="VIY07_01110"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031267 - small GTPase binding [Evidence
                     IEA];
                     GO_process: GO:0006888 - endoplasmic reticulum to Golgi
                     vesicle-mediated transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Yip1 family protein"
                     /protein_id="HEY6380383.1"
                     /translation="MNLVERIKGILLQPKSEWPAIGREPGDAGYLFPNYVAIVAAIPA
                     VCTFIGTSIIGYGGYRIGIGLGLVRAVVVYALSLVGVFVVAYIIDFLAGTFGAQKNSE
                     NAMRVSAYAPTAAWVAGVFNIIPALAFLGILGLYSLYLLHTGIVALMKPAPDKAVIYT
                     IAVIVCAIIVWIVIFGITALLFGV"
     gene            complement(3489..5909)
                     /locus_tag="VIY07_01115"
     CDS             complement(3489..5909)
                     /locus_tag="VIY07_01115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEY6380384.1"
                     /translation="MPKRTPLKSTTAETLQVLAALERKVLWLASWMIHNANHLRDNAD
                     GLKVGGHQASSASLATIMTALYFDVLRPHDRVAVKPHASPNFHAIQYLFGKQTRERLE
                     AFRGYKGAQSYPSRTKDADDVDFSTGSVGLGVAQTLFSSLTQDYVRAHGWGLDRPEGR
                     MVALVGDAELDEGNIFEALLEGWKQGLRNCWWIIDYNRQSLDAVVREGLWARYEQLFN
                     NFGWKVVILKYGSLQEAAFKEPGGETLRKWIDNCPNQLYSALVFAGGTAWRKRLNDEI
                     GDQGDVSKLIEKRSDAELAALMNNLGGHDMPTVLDAFHNADSEQPTCFICYTVKGFGL
                     PFAGHKDNHAGLMTPQQMDAYRQAMGVRTGQEWDKFEGLDLPAERLQSFLDRVPFAAD
                     GRRRLNAPTIDVPDELPVTIQPVMSTQTGFGALLNEIGRNDSDFARHVVTTSPDVTVS
                     TNLGPWVNRRGLFAREAMADTFKSERIPSTFNWEFSPKGQHIELGIAEMNLFILLSAL
                     GLSHSINGERLLPIGTLYDPFIARGLDALNYACYQDARFILAATPSGITLAGEGGAHQ
                     SIAEPLIGIAQDGLASFEPAYVDELAVIMAWAFSYIQKNGDRSPSETSWLRDETGGSV
                     YLRLSTRPIEQMKRPITPELRQQIVDGAYWQRKPGPNCQVVVAYTGAVAPEAIEAVGL
                     MAEDRRDVGLLAITSADRLNAGWAAAQRARERGLVHARSHIERLLADVPSHSGIVTVL
                     DGHPATLAWLGAVAGHRTRALGVEHFGQTGSLAELYRHYGIDANAIIAAAQTIAPGRP
                     IRHLKALP"
     gene            complement(5936..>6359)
                     /locus_tag="VIY07_01120"
     CDS             complement(5936..>6359)
                     /locus_tag="VIY07_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018386993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HEY6380385.1"
                     /translation="TWTPQHIAFIKTAAQQPEVQRVLVNAAIKKELCRVEAKKPHAWM
                     AKVRPWYGHHDHIHVRLFCPAGSPKCEAQEQVKDEDGCSGKELDAWFSDKRLKPQISK
                     PPPPAKPPKPMMLADLPPACKAVLEAPAKGTSLASDKR"
BASE COUNT         1223 a         1905 c         1951 g         1280 t
ORIGIN      
        1 aatgccatga tgccgcatgc aagtgcggcg ccggtccagc ggaacgaaaa cacgataccg
       61 aaatgatcgg caagaaaggc accgagcggc gcctttcgac cgaagctgat cagcagcagg
      121 tagccggtga cgaccggcgg caaaaccagc ggcatatgca cgatggcgtc gagcagcgat
      181 tttccccaga acgatccccg tgcgagcagc acggcaattg caatgccgaa cggcaacgcg
      241 acgagggttg agatcgcagc gacgcgcagc gacagcgcga ccgcggtcca gtcctgggac
      301 gataggtcaa acacgcgttt cgatactgcc ttacgacacc ggcttgatca ggaaactgaa
      361 gccgtatttt tcgaaaatcg tcttggcggc gggcgtgcgc aggaagctga aatattgccc
      421 gaccgcaacg ttccttgccc taacggttgc ggccactgga taggtgaccg gcgggtaaga
      481 gtcgtcggga aagatgccga tggtctttac cttcggttcg atcctggcgt cggtttcata
      541 gacaatgccg atcggtgttt cgccgcgcgc gacgaaagca agcgttgccc tcacattctc
      601 ggcttgagcc agcttcggat ctgctgccgc ccaggccccg agcttctcaa gtgctgccct
      661 ggcgtaaaga ccggcaggga cggccttcac gtcggcgact gcgatgcggc catcgccggc
      721 aagcttcgcg atgtcaaaac cctggccgat ggtgacatgc ccgagtttgg aatccgcagg
      781 tgcgatcagc accaatttgt tgccaagcag gttcacccgg gtgttggggt taatcagctt
      841 gcgttccgcc acatagtccc tccagcgcag gtcggcggag ataaacacgt cggcaggagc
      901 gccctgttcg atctgcctgg ccaacgcgga gcttgcctcg tagctcacaa ccaccttgat
      961 accggtggcc ctggtgaaag cggcattggt gtcatcgagc gcatttttca gggatgcggc
     1021 cgcaaacacc gtgacctgtt cttgcgcgat aaccggctgc ggcgcgccgg cgagtgcgcc
     1081 tgcaaggctg aaaaacacga gaaatcttgt gagcatggcg gttctcctgc ggcgccgagg
     1141 ggccggccaa aaaagctgat cgtaaaagga accgccgttc cgactattgc agcgcacgca
     1201 cggggcactg cagctttgtg agtctagcaa gtcctgccga ccggggtaaa gtcgcgccgg
     1261 gagtgcgaag gctatggcga acgcaacgcg catcgaaggc gatttcgatt acatcgtcgt
     1321 tggcgctggc tcggcaggct gcgtgctggc caaccgcttg tcggccgacc ccacaaagcg
     1381 cgtgctgctc ctcgaggccg gcggcaaaga taattggatc tggcttcata ttcccgtcgg
     1441 gtaccttttt gccatcggca acccgcgagc cgactggctg ctcaagacgg agccggagcc
     1501 gggccttaat ggacgcagcc tgaactaccc ccgcgggaag gtggtcgggg gctcgtcggc
     1561 aatcaatggc atgatctaca tgctgggcca gtcaggcgat tacgaccact ggcgccagct
     1621 gggcttgccg ggttggtcct gggacgacgt gcgcccctat tttcgccggc acgtcgatca
     1681 ctttctcaaa agcgagcacc atggcatcgg cggcgagtgg cgcgtggagt atccgcgttt
     1741 gaactgggag attctcgacg cgttccgcgc cgcggcaaac cagtatggaa tcccaacggt
     1801 cgaggatttc aataccggcg ataacgaagg catttgctat tttcacgtga accagaaacg
     1861 cggccggcgc tggtcggcgg cacgcgggtt cttgaagccg gtcctgcacc ggccgaacct
     1921 ccggctcgaa accggctgtc ttgtcgaagc ggtggaattg aatgggacgc gagcgacgtc
     1981 cgtgcgctgg cgccaaaacg gcgagctgcg gagcgcccaa tgtcgcggtg aggtgatact
     2041 tgccgccggc gcgattggtt cgccgcatat catgatgctt tccggcatag ggccggcggc
     2101 gcagctggcg cattttggca ttccggtggt cctcgacaag ccgggggtgg gcgccaatct
     2161 gcacgaccac ttgcaactgc ggatggtttt caaggtctcg ggggtaaaaa cgctgaacga
     2221 gacctatgcc aggatgttca accggttcag catgggcgtc gactacgccc ttcgtcgccg
     2281 cggtccgatg acgatggcgc cgtcgcaact tggtgccttt accaagtctg acccatcgca
     2341 aagcactgcc aacatccagt atcatgtgca accgctttcg ctcgatcgat tcggtgagcc
     2401 gttgcactca tttcctgcct tcacggcaag cgtcgccaac gtgcgtccga cgagtcgcgg
     2461 cacactcacg ctcaaatcaa atgatccggc gcaggcgcct gccatcagcc caaactacct
     2521 cgcgacgccg gaggaccagc gcgtggccgc cgattcgatt cgcgtcacgc gcaggatcgt
     2581 cgctcaaccg gcgctgcaaa aatattcacc catcgagtat ttacccggag catcggtgcg
     2641 cgatgatgac gaggaggctt tggtaaaagc cgctggcgac atcggcacca caattttcca
     2701 tcctgtcggc actgcgcgga tgggccgcga cgacgatccg aaagctgtcg tggatgcgcg
     2761 gttgcgcgtc atcggcatcg atggcctgcg catcgtggac gcgtccgcga tgccttcgat
     2821 cacgtccggc aacaccaatt caccgaccat gatgatcgcc gaaaagggcg cggcgatgat
     2881 tttggaagat cagaaaactt gaaccgcgga tcagatggag gggtgtcatg aatctcgtgg
     2941 aacgtattaa ggggatcttg ctgcagccga aatcggaatg gccggcaatc gggcgcgagc
     3001 caggcgatgc cggctacctt tttccgaatt atgtcgcgat cgtcgccgcc ataccggcgg
     3061 tgtgcacatt tatcggaaca tcgattattg gctacggagg ctaccgtatc gggatcggac
     3121 ttgggcttgt acgcgcggtt gtcgtttatg ccctctcgtt ggtcggcgtt tttgtcgtcg
     3181 cctacatcat cgactttctt gccggcacgt ttggcgcgca aaaaaactcc gagaacgcca
     3241 tgagagtgtc ggcctatgcg ccgaccgctg cctgggtcgc cggcgtcttc aacattattc
     3301 cggcattggc gtttctcgga attctcggcc tgtacagtct ttatcttctg cacacaggca
     3361 ttgtggcgtt gatgaaaccc gcgcccgaca aggcggtgat ctatacgatt gccgtcatcg
     3421 tctgcgcgat cattgtctgg atcgtgattt tcggcatcac cgcattgctg ttcggcgtct
     3481 agcccggatc agggcaacgc cttgaggtgc cgaatcggcc ggccgggcgc aatcgtctgc
     3541 gccgcggcaa tgatcgcgtt cgcgtcgatg ccatagtgcc gataaagctc ggcgagcgag
     3601 ccggtctgac cgaaatgctc gacaccaagc gctcgggtcc ggtggccggc gactgcgccg
     3661 agccaggcca gcgttgcagg atgtccatcg agcacggtga cgatgccgct gtgcgacggc
     3721 acgtcggcaa gcagccgctc aatatgcgaa cgcgcgtgca cgagacctcg ttcgcgggct
     3781 cgttgcgccg cggcccagcc cgcattgagc cggtctgcgg atgtgatcgc gagcaggccg
     3841 acatcacggc gatcctctgc catcaggccg acggcttcga tggcttccgg cgccaccgcg
     3901 ccggtatagg cgacgacgac ctggcaattg ggacccggtt tgcgctgcca gtaggcgccg
     3961 tcaacgatct gctggcgtaa ttccggcgtg atcggccgct tcatctgctc tatcggccgg
     4021 gtcgacagcc gcaaataaac cgatccgccg gtttcatcgc ggagccagct tgtttcggaa
     4081 ggcgatcggt caccgttctt ctggatgtac gaaaaagccc aagccatgat caccgcgagt
     4141 tcgtcaacgt acgcgggctc gaaactggca agtccgtctt gcgcgattcc gatcagcggc
     4201 tcggcgatcg attgatgtgc gccaccttcg ccggccagcg tgatgcccga cggcgtcgcc
     4261 gccaggatga agcgagcatc ctggtagcag gcataattca gcgcatcgag cccgcgcgca
     4321 atgaatgggt cataaagcgt gccgatcggc agcagacgct cgccattgat gctgtgggaa
     4381 agaccgagcg ccgatagcag gatgaagaga ttcatctccg caatgcccag ttcgatgtgc
     4441 tggcctttgg gcgagaattc ccagttgaat gtcgagggga tgcgctcact tttgaacgtg
     4501 tcagccatcg cctcacgcgc aaacagcccg cgacggttaa cccaaggccc cagattcgtg
     4561 gatacggtca catccggcga tgtggtgacg acatggcgcg cgaagtcgct gtcgttgcgt
     4621 ccgatctcgt tgaggagagc gccaaatccc gtttgggtgg acatcaccgg ttgaatggtg
     4681 acgggaagct catccggcac atcgattgtc ggtgcgttga ggcgtcgccg cccatccgcg
     4741 gcgaacggca cacgatccag aaatgactgc aatcgttccg ctggtaaatc gaggccttcg
     4801 aacttgtccc actcctgacc cgtgcgcacc cccatggcct ggcggtatgc gtccatttgt
     4861 tgcggggtca tcagcccggc gtggttgtcc ttgtgtcctg cgaaaggaag gccaaagcct
     4921 ttcaccgtgt agcagatgaa acaggttggt tgctcggaat cagcgttgtg gaatgcgtca
     4981 agcaccgtgg gcatgtcatg cccgccgaga ttgttcatca aggccgccag ctcggcgtcg
     5041 ctgcgctttt cgatcaactt gctgacgtcg ccctggtcgc cgatctcatc attgagacgc
     5101 ttcctccatg ccgtcccgcc cgcaaaaacg agcgccgagt aaagctggtt cgggcagttg
     5161 tcgatccact tgcgcaatgt ctcgccgccc ggctccttga acgctgcctc ctgcagcgag
     5221 ccatatttga gaatgacgac cttccatccg aaattattga agagctgctc atagcgagcc
     5281 caaagcccct cgcgaacaac agcatcgaga ctctggcgat tgtagtcgat gatccaccag
     5341 caattgcgaa ggccctgctt ccagccttcg agcaacgcct cgaagatatt tccttcatcc
     5401 agttcggcgt cccccaccag cgcgaccatg cggccttcgg gccggtcaag gccccagcca
     5461 tgggcgcgca cgtaatcctg cgtcagggag gagaaaagcg tctgcgcgac gccaagaccg
     5521 actgaaccgg tggagaaatc gacgtcatcg gcatctttcg tgcgggaagg gtagctctgc
     5581 gcgcccttgt agccccggaa ggcttccagc cgctcgcgcg tctgtttgcc gaacagatac
     5641 tggattgcat gaaagttggg gctggcgtgc ggcttcactg cgacccgatc gtgcggccgc
     5701 aggacgtcaa aatagagcgc ggtcatgatt gtcgcgagtg aggcacttga ggcctgatgc
     5761 ccgccgactt tcaagccgtc tgcattgtcg cgaagatgat tggcgttatg gatcatccag
     5821 ctcgcgagcc agagcacctt gcgctccagc gccgcgagca cctgcagcgt ttccgccgtc
     5881 gtcgacttga gtggggtgcg cttgggcatc ggcattgtat agcgccttga atttttcagc
     5941 gcttgtcgct ggccaagctg gtgcctttgg caggcgcctc aagaacggct ttgcaggccg
     6001 gcggcagatc cgcaagcatc atcggctttg gcggcttggc cggcggtggc ggcttggaga
     6061 tctgaggttt cagcctcttg tcagagaacc aggcgtcaag ctccttgccg ctgcagccat
     6121 cttcgtcctt cacctgctct tgcgcttcgc atttcggcga accggcagga caaaacaagc
     6181 gcacgtgaat gtggtcgtga tgcccatacc agggccttac cttggccatc cacgcgtgag
     6241 gttttttcgc ttcgacccgg cacagttcct tcttgatcgc ggcgttgacg agcacgcgct
     6301 ggacctcggg ctgctgggca gcggtcttga tgaacgcgat gtgctgcggc gtccacgtc
//
LOCUS       DATDHO010000060         1726 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_151522, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000060 DATDHO010000000
VERSION     DATDHO010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1726
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151522"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..161)
                     /locus_tag="VIY07_01125"
     CDS             complement(<1..161)
                     /locus_tag="VIY07_01125"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007874874.1"
                     /note="catalyzes the reversible phosphoryl transfer from
                     adenosine triphosphate (ATP) to thymidine monophosphate
                     (dTMP) to form thymidine diphosphate (dTDP); Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate kinase"
                     /protein_id="HEY6380386.1"
                     /translation="MRGRFITFEGGEGSGKSTHAATLAQRLRSLGLEVVLTREPGGST
                     GAEIIRHILL"
     gene            complement(214..1305)
                     /locus_tag="VIY07_01130"
     CDS             complement(214..1305)
                     /locus_tag="VIY07_01130"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEY6380387.1"
                     /translation="MSAPHAILIDSENGAVLFERDADRMVFPASLAKLMTIEYIFHEI
                     KEGRLKLTDEFMVSENAWRKGGAPSHGSTMFAAIYSKVPVDDLIRGMIVQSANDACIV
                     LAEALAGNEAAFGEKLTERARAIGLQKSVFTNSNGLHDPGEQATTRELAMLARHIIRT
                     YPDFYQIFSQPDYTWNKIRQQNRNPLLGAMTGADGLKTGFTKEAGYGLVGSAVQNGQR
                     LIVVVTGVGTAKERADEAKKLLEWGFRNFEQRVLFAEGQTIGTAKVFGGATGRVPLVA
                     EGAVRVLLPKTGSDKLIARIVYNGPVPAPVSEGTRVGNLKVWRNENVILTMPLKAAER
                     VGKGSMPQRAFDAVTEMIIALFRAGAERL"
     gene            complement(1313..1537)
                     /locus_tag="VIY07_01135"
     CDS             complement(1313..1537)
                     /locus_tag="VIY07_01135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380388.1"
                     /translation="MTAKAPAIAPQSLFALPARTFGDGHAEFRIWTVLGRAGSFLSVR
                     VSIRCDIFAPTSCHGGSKEGCAEERSAEER"
BASE COUNT          334 a          533 c          483 g          376 t
ORIGIN      
        1 agcaggatat ggcggatgat ctcggctccc gtcgacccgc cgggctcgcg cgtgagcaca
       61 acttcgaggc caagagatct cagccgctgc gccagggtcg ctgcgtgagt ggatttgccg
      121 ctgccttcgc cgccttcaaa cgtaatgaaa cgtccgcgca tctgaccctc ggtcagtccg
      181 gggcgcgggc agcgtcctgg atcgacaatg aaatcatagc cgctcggctc cggcacgaaa
      241 tagcgcgatg atcatttcgg tcaccgcgtc gaaagcgcgt tgtggcatgg accctttgcc
      301 gacgcgttct gctgccttca gaggcatcgt caaaataaca ttctcgttgc gccagacttt
      361 gagattacca acccgcgtgc cctccgaaac cggcgcgggt accgggccgt tgtagacgat
      421 acgtgctatc agcttgtcgc tgcctgtctt cggcagcaga acccgtacgg caccctccgc
      481 gacaagtggc acacggccgg tcgcgccgcc gaacactttt gcagttccga tcgtctggcc
      541 ctccgcaaaa agcacgcgtt gttcgaaatt cctgaatccc cattcgagca gcttttttgc
      601 ctcgtccgcg cgttccttgg cggtgccgac tccggtcacg accacgatca acctttgtcc
      661 attctggaca gccgacccga ccagaccgta acccgcctct tttgtaaatc cggttttcag
      721 tccgtcggcg ccagtcatcg cgccaaggag cggattgcga ttctgctggc gaatcttatt
      781 ccaggtgtaa tcgggttgag aaaaaatctg ataaaaatcc ggataggtgc ggatgatgtg
      841 gcgagccagc atcgccaatt cgcgggtcgt ggcctgctcc cccggatcgt ggagcccgtt
      901 cgaattggtg aacacggatt tttgcagccc gatggctcgc gcgcgttctg tcagcttttc
      961 gccgaaggcg gcctcattgc cggcaagcgc ctccgccagg acgatgcagg catcattcgc
     1021 cgactggacg atcatgccgc gtatcaggtc gtcgacgggc accttactgt agatcgccgc
     1081 aaacatggtc gacccatgag agggcgcgcc gcccttgcgc caggcatttt cgctgaccat
     1141 gaattcgtca gtcagcttca ggcggccttc cttgatttca tgaaatatgt attcgatcgt
     1201 catcagtttg gcgaggctgg ccggaaagac catccggtcg gcgtcgcgtt caaacaggac
     1261 cgcgccattc tcggagtcga tcaaaatggc atgcggagcg ctgatattcg gctcatcttt
     1321 cttctgcgga tctttcttcg gcgcatcctt cttttgagcc gccgtggcag ctggtcggtg
     1381 cgaagatgtc gcagcgaatg ctgacgcgca cagacagaaa gctgccagca cgaccaagca
     1441 ccgtccaaat gcgaaattcc gcatggccat caccaaaagt ccttgccggc agcgcaaaaa
     1501 gcgattgcgg cgcaatcgcc ggagctttgg cggtcaatta cggctcagta aaggccacgt
     1561 ccgctagtat agccggttcc gccatcatag ggtttttcac cgccctgtct acgtcgctgt
     1621 gcgtccgcac gcgttgcaag ttatccccgt attacttaca cttctgcgca tatgcgtccg
     1681 ccagcgtatg gcggcatcgc tgaacatgga cgggacactc cgggac
//
LOCUS       DATDHO010000061         1814 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_101747, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000061 DATDHO010000000
VERSION     DATDHO010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1814
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101747"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1155
                     /locus_tag="VIY07_01140"
     CDS             <1..1155
                     /locus_tag="VIY07_01140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HEY6380389.1"
                     /translation="PAQQQAQPPPGTQPPGQPAGPPQQRQVQPPPSAQPPRPASPQQP
                     VGTPAIPPSALQPPPPAPGSPTAEAQRAFVPPPAQDNARRLDDVRNSRREVREGDRVV
                     IQEPGRVIIRENGRTIVRHNETDRFRWQARNAHVERHGRDTVTVFERADGSRIYTVTD
                     ESGRLLRRYRRGLDGREIIIIDNRYSGPPVVGGYFVTLPPPVIRIPRERYIVDAQYAR
                     PGDIYYALWAAPVDHIDRRYTLDEVRYSPTLRERMPRIDLDTVTFDTGSWEVTPDQVD
                     RLAVIADGINRAIATNPSEVFLVEGHTDAVGSDVDNLSLSDRRAESVALVLSQQFGVP
                     AENLTTQGYGEQYLKVPTEGPERANRRVTMRRITPLLTGQNEAVPLPPPQ"
     gene            1381..>1814
                     /locus_tag="VIY07_01145"
     CDS             1381..>1814
                     /locus_tag="VIY07_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380390.1"
                     /translation="MHDLGERRTQRRQRVCKNAAILVSDNSPKLECAVRDLSPQGVRL
                     QFSTTYGIPYQFDVLVDGRQRRCRSIWRTYTEIGVMFLEATERTSNCSQHEFDIVPLI
                     ELLKMAAEKWPGSETAGVSEIELFQRMLLEMWPEACRRTGVAV"
BASE COUNT          367 a          583 c          529 g          335 t
ORIGIN      
        1 ccggcgcaac aacaggcgca accacctccg ggcacgcagc cgccgggaca gccggcagga
       61 ccaccgcaac aacgtcaggt gcagccgccg ccaagcgcgc agccgcctcg cccggcctca
      121 ccacaacaac cggttggaac acccgcaatt cctccctcgg ccttgcagcc cccgcccccg
      181 gcgcccggat cgccgacggc agaggcgcaa cgcgcctttg tcccgccgcc ggcgcaggat
      241 aatgcgcgcc gtctcgatga tgtgcggaac tcccgccgtg aagtgcgcga aggcgaccgc
      301 gtcgtgattc aggaacccgg ccgcgtcatc atccgcgaaa acggacgcac catcgttcgc
      361 cacaacgaga ccgatcgctt ccgctggcag gcgcgcaacg cccatgttga gcgccacggc
      421 cgcgacacgg ttaccgtgtt cgagcgcgca gacggctcgc gcatctatac cgtgaccgat
      481 gagagcggcc gtctgctgcg ccgttacagg cgcgggctgg acggacgcga gatcatcatc
      541 attgacaacc gttacagtgg cccgccggtg gtgggcggct atttcgtgac tttgccccct
      601 ccggtgatcc gaattccccg cgagcgttac atcgtcgatg cccaatatgc tcgcccgggc
      661 gatatctact acgcgctttg ggccgcgccc gtagaccata tcgatcgacg ctatacgctc
      721 gacgaggtcc gctacagtcc gactttacgc gagcgcatgc cgcgcatcga cctcgacacg
      781 gtcacgttcg acaccggctc gtgggaagtt acgcccgacc aggtcgaccg cctggccgtg
      841 atcgccgatg gcatcaatcg cgccattgcg acaaatccaa gcgaagtttt tctggtcgaa
      901 ggccacaccg acgccgtcgg ctccgacgtt gacaacctgt cactttctga tcgtcgcgcg
      961 gaatcggtgg cgctagtgct cagccagcag ttcggagtcc ccgcagaaaa tctgacgact
     1021 caaggttatg gcgagcagta cctgaaggtc ccgacggagg gaccggaacg ggcaaaccgc
     1081 cgcgtgacca tgcgacgcat cacgccgctg ttgaccggcc agaacgaggc cgttccgctg
     1141 ccgccgccgc aatagtcgca cgccgcagcg ccgcgtgagc tctcgatgcg aaatccaaag
     1201 agcttgcgcg agcccgcaga tacgctgcgc cgttgggaga cctttcgcgg tacccgcaaa
     1261 gcctgcgtga ttaacgcttt ctttcagcga gcccgtttct ttgcggattg aggttaaagc
     1321 attcgccagt tttgtccctt atttaagttc aattgtcgga atttctgtga gtgactcgca
     1381 atgcacgacc tgggagaacg aagaacgcag cgtcgccaac gcgtttgcaa aaacgcagcg
     1441 atacttgtca gtgacaatag ccccaagctc gaatgcgccg tccgcgactt gtcaccacaa
     1501 ggggtgcgcc tgcaattttc gacaacctat ggcattccct atcaattcga cgtgctggtt
     1561 gatgggaggc agagacgctg tcgctccatc tggaggacct atacagaaat tggcgtgatg
     1621 tttttggaag caacggagcg gacctccaat tgctcgcagc atgaatttga tatcgttccg
     1681 ctcatagagc ttttgaaaat ggcagcagag aaatggccag gttccgaaac tgctggcgtt
     1741 tccgaaattg aactgtttca gcggatgctg cttgaaatgt ggccggaggc gtgtcggcgg
     1801 accggcgtcg cggt
//
LOCUS       DATDHO010000062         3433 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_2801, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000062 DATDHO010000000
VERSION     DATDHO010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3433)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3433)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3433
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2801"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(220..987)
                     /locus_tag="VIY07_01150"
     CDS             complement(220..987)
                     /locus_tag="VIY07_01150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6380391.1"
                     /translation="MAKGHKDKVAVITGAAGGIGQAFAKRLAEDGAHIAIVDIGDGAS
                     TVKMVEAAGRQAIAAKCDVASESLVTAMAKQVQDKFGHVDIVVNCAGIFPQKNFSEMT
                     FADWRQVLSINLDGTFLVTAAFVPGMRARKWGRIVNMASSTLGSVVTGFAHYVASKGG
                     IVGFTRALATDLAPDGITVNAIAPGLTRSPGTIVRQPRPGFKTMDEEFAAVAQMQAIK
                     RVEVPEDLVGAVSFLTSDDAAFMTGQTLNVDGGRVRS"
     gene            complement(1035..2435)
                     /gene="lpdA"
                     /locus_tag="VIY07_01155"
     CDS             complement(1035..2435)
                     /gene="lpdA"
                     /locus_tag="VIY07_01155"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEY6380392.1"
                     /translation="MPYDLIVIGTGPGGYVCAIRAAQLGLRTAVVEKRATYGGTCLNI
                     GCIPSKALLHASELFEEAGHTFPKMGIDVSTPKLDLKAMMAFKDRGVEGNVKGVDFLF
                     RKNKIDAYYGSGRITAPGKVEVESENGKLQTLEAKSIVIATGSDVARLKGVEIDEKRV
                     VSSTGALSLPEVPKHLVVVGAGVIGLELGSVWRRLGSQVTFVEFLDGVLPGTDGEVRR
                     QAQRLLEKQGMTFKLSSKVTAVDTSGKRLKASIEPAKGGAAETIEADVVLVAIGRVPF
                     TEGLGLKELGVKLDERGRVIVDRHYATNVAGIFAIGDVISGPMLAHKAEDEGVALAEI
                     LVGQAGHVNYDAIPNVIYTFPEIATVGKSEEELKAEGIAYNVGKFPFTANARAKVNLT
                     TDGFVKILADAKTDRVMGVHLICADAGNMIAEAVLAMEFGASAEDIARTCHAHPTLPE
                     AVKEAAMTVAKRAIHM"
     gene            complement(2548..>3433)
                     /gene="odhB"
                     /locus_tag="VIY07_01160"
     CDS             complement(2548..>3433)
                     /gene="odhB"
                     /locus_tag="VIY07_01160"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEY6380393.1"
                     /translation="LPPSVRKMAAESGVDPSRIAGTGLHGQVTKADMLGAIERAAAVP
                     TPVSAPVQMRAPSPADDAAREERVHMTRLRQTIARRLKDAQNTAAMLTTFNEVDMSAV
                     MHLRNQYKDLFEKKHGVKLGFMGFFVRACIQGLKEIPAVNAEIDGTDIVYKNYYHIGV
                     AVGTDRGLVVPVIRDADQMSLAQIEKTIADFGRRAREGTLKIEEMQGGTFTISNGGVY
                     GSLMSTPILNAPQSGILGMHKIQERPVVVGGKIEPRPMMYLALSYDHRIVDGREAVTF
                     LVRVKECLEDPARVVLDL"
BASE COUNT          654 a         1075 c         1003 g          701 t
ORIGIN      
        1 gagattgacg agccgagcga cgatgggctc gaggtgatcc cacagccagg cttccagcag
       61 aagcagcagc gcgagaatga cccaaagcgg gcgcagcgcg tttcgacgca tgattcgaat
      121 ataggcgcgc aggatgtccc ggataaggcg aactgtcgcc cgtggccgcg cacgatcgcc
      181 aacacattga tagctgcgga gtttcggtcc ccgcctcgcc tacgacctca cccgtccgcc
      241 gtcgacattg agggtctgcc cggtcatgaa ggcggcatcg tcgctggtga gaaacgagac
      301 tgcgccgacc agatcttccg gtacttcgac gcgcttgatc gcctgcattt gcgcgaccgc
      361 ggcaaattcc tcatccatcg ttttgaaacc cgggcgtggt tgacgcacaa tcgtgcccgg
      421 cgagcgcgtg agtcccggcg caattgcatt gaccgtgatg ccgtcgggag ccagatctgt
      481 cgcaagcgcg cgcgtgaagc cgacgatccc gcccttgctc gcgacgtagt gggcaaagcc
      541 ggtaacgacc gaaccaagcg tgctcgacgc catgttgacg atccggcccc atttgcgcgc
      601 gcgcatcccg ggcacaaaag cggccgtcac caggaaggtg ccgtcgagat tgattgaaag
      661 gacctggcgc caatccgcaa aggtcatctc ggaaaagttt ttctgcggga agatgccggc
      721 gcagttcacc acgatgtcaa cgtgaccgaa tttgtcctgg acctgcttcg ccatggcagt
      781 aaccaagctt tccgacgcga cgtcgcactt ggctgcaatc gcctgccggc cggcagcctc
      841 gaccatttta acggtcgagg ccccgtcgcc aatatcgacg atagcaatgt gtgcgccgtc
      901 ttcagccaaa cgtttggcga atgcctgtcc aatgccacct gcagcgccgg tgatgacggc
      961 gactttatcc ttatggcctt ttgccatgta cgaatctccc ccgaaccttg ttctgttatt
     1021 cgcccgcgta aggatcacat gtgaatagcg cgtttcgcta ctgtcatggc agcttccttc
     1081 accgcttcag gcagggtcgg atgcgcgtgg caggtgcgcg cgatgtcctc ggctgacgcg
     1141 ccgaactcca tggccaagac ggcttcggcg atcatgttgc cggcatctgc gcagatcaga
     1201 tgaacgccca tcacgcgatc ggttttggcg tcggccagaa tcttgacgaa accgtcggtg
     1261 gtcagattga ccttggcacg ggcattggcc gtgaacggaa acttgccgac gttgtaggcg
     1321 atgccttcgg ccttcagctc ctcttcgctt ttcccaacgg ttgcgatttc cggaaaggta
     1381 tagatcacat tgggaatggc atcgtagttc acgtgccccg cctgaccgac tagaatttcg
     1441 gccagggcaa cgccttcgtc ctcggccttg tgcgccagca tcggcccgga gatgacgtca
     1501 ccaattgcaa atatgcccgc gacattagtt gcataatggc gatcgacgat aacgcgcccg
     1561 cgctcgtcca gtttgacgcc gagttccttg agaccaagcc cttcggtgaa cggtacccgg
     1621 ccgatcgcga ccaggaccac gtcggcctcg attgtttcgg ctgcgccacc tttcgcaggc
     1681 tcgatgcttg ccttgagccg ttttcccgat gtgtcgactg cagtcacctt tgacgacagc
     1741 ttgaacgtca tgccttgttt ttccaataga cgttgcgcct gacggcgcac ttcgccatcc
     1801 gtgcccggca aaacgccatc gagaaattcc acgaaggtta cctgcgaacc aagccgcctc
     1861 cagaccgagc cgagctcgag gccaatgact ccggctccga ccaccaccag atgcttgggc
     1921 acctccggca gcgacagcgc tcctgtcgat gagacaacgc gtttctcgtc gatctcaacg
     1981 cctttaagac gcgcaacgtc cgaccccgtc gcaatgacga tcgatttggc ctcgagtgtc
     2041 tgcagtttgc cgttttcgct ttcgacttcg accttgccgg gcgcggtgat gcggccgctg
     2101 ccgtagtagg catcgatctt gttcttcctg aacaggaagt cgacgccctt gacgttgcct
     2161 tcgacacccc tgtccttgaa cgccatcatg gccttgaggt cgagcttagg cgtggaaacg
     2221 tcgattccca tcttggggaa ggtgtgtcct gcctcctcga acaattcaga ggcgtgcaag
     2281 agcgccttcg agggaatgca gccgatgttg aggcaggtgc cgccatacgt ggcgcgtttt
     2341 tcgacaacgg cagttctcag accgagttgc gcggcacgga tggcacagac gtagccgcct
     2401 gggccagtgc cgatgacgat gaggtcatag ggcatcgaat tactccacac tctcgatcgt
     2461 tatggccggg cttttcccgg ccatgcacgt cttaagaaag caaggcgtgg atgcccggca
     2521 caagaccggg cataacggag aacaactcta cagatccaac accactcgcg ccggatcttc
     2581 gaggcattcc ttcacgcgca ccaggaaggt gaccgcctcg cggccatcga cgatgcggtg
     2641 atcgtaggaa agcgcgagat acatcatcgg gcggggctcg atcttgccgc cgacgaccac
     2701 cggccgctcc tggatcttgt gcatgccgag gatgccggac tgcggcgcat tcaatatcgg
     2761 ggtggacatc agcgagccat aaacgccgcc attgctgatg gtgaacgtcc cgccctgcat
     2821 ctcttcgatc ttcagcgtgc cctcgcgcgc gcgccggccg aaatcggcga tagtcttttc
     2881 aatttgcgcg agcgacatct ggtccgcatc gcggatgaca ggcacgacca ggccgcggtc
     2941 ggttccgacc gcaacgccga tgtgatagta attcttgtac acaatatcgg tgccgtcgat
     3001 ctcggcattg actgcgggaa tctccttcag cccctgaatg caggcgcgca cgaagaagcc
     3061 catgaagccc agcttcaccc cgtgcttctt ctcgaacaga tccttgtact gattgcgcag
     3121 atgcatcacg gcgctcatgt cgacctcgtt gaaggtcgta agcatggcgg ccgtgttctg
     3181 ggcatctttt agacggcggg cgatagtctg gcgcagccgc gtcatgtgca cgcgttcctc
     3241 gcgcgcggca tcgtcggccg gggacggtgc ccgcatctgc acgggcgcgg ataccggggt
     3301 gggaacggcc gcggcgcgct cgatcgcgcc cagcatgtcg gccttggtga cctggccatg
     3361 cagtccggtg ccggcaatcc tggacgggtc gacgccgctt tcagccgcca tcttccgcac
     3421 cgatgggggc aac
//
LOCUS       DATDHO010000063         1625 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_151533, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000063 DATDHO010000000
VERSION     DATDHO010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151533"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..883
                     /gene="dgcA"
                     /locus_tag="VIY07_01165"
     CDS             <1..883
                     /gene="dgcA"
                     /locus_tag="VIY07_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016855 - racemase and epimerase activity,
                     acting on amino acids and derivatives [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetyl-D-Glu racemase DgcA"
                     /protein_id="HEY6380394.1"
                     /translation="LSDGIARGRGECVPYARYGESVDSVMAQIEAMRSQLGAGIDRKG
                     LQRAMPPGAARNALDCAFWDLEAKRAKRPAHELAELPAPQALPTAYTISLAAPDAMAR
                     AAKDADGRSLLKIKLGAEGDSARIAAVRAAAPQATLIVDANEGWNEANVAANAAACAE
                     AGVVLIEQPLPEGGDQILAHMQRPIPICADESVHDRSSLSALTGRYDAVNVKLDKAGG
                     LTEALAMVAEARRQGFTIMVGCMVATSLAMAPAILIAQQARFVDLDGPLLLSRDRPNG
                     LRYVDSMVFPPSPALWG"
     gene            1074..1595
                     /locus_tag="VIY07_01170"
     CDS             1074..1595
                     /locus_tag="VIY07_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380395.1"
                     /translation="MQIRGLAFGAAALALSITSASATMRISEDRGGQIGRYLEAFASV
                     RSSGERVVVDGNCLSACTLVLGVVPRERICATQRARFGFHAAWMPDRDGRPVTSPLGT
                     QALWSIYPASVRRWITRHGGLSRKMLFMQGQDLNGIVASCDRDGREQVRSARRLTPNP
                     VRYESASAASDRR"
BASE COUNT          283 a          508 c          525 g          309 t
ORIGIN      
        1 actcagcgac gggatcgcac gcggccgcgg cgagtgcgtc ccctatgcgc gctatggcga
       61 aagcgtggac agcgtcatgg cacaaatcga agcgatgcgg tcgcagctcg gggcgggcat
      121 cgatcgtaag ggcctgcaga gagcaatgcc accgggcgcg gcacgcaatg cgcttgattg
      181 cgcattttgg gatttggagg ctaagcgcgc caaacgcccg gcacatgaac ttgccgaact
      241 ccctgctccg caggcgctgc cgaccgctta cacgatttcc cttgctgctc cggatgcaat
      301 ggcacgagcg gcgaaagacg ctgacggccg ctctctgctc aagatcaagc ttggcgccga
      361 gggcgatagc gcgcgcattg ccgcggttcg cgccgctgcg ccccaggcga cgcttatcgt
      421 cgatgcaaac gagggctgga atgaggccaa tgttgcggcc aacgccgcag cgtgtgctga
      481 ggcaggcgtt gttctgatcg agcaaccgct gcccgagggt ggggatcaga tcttggcgca
      541 catgcagcgg cccattccca tatgcgcgga cgagagtgtg cacgaccgct cttcgctatc
      601 cgccctcacc ggccggtacg atgccgtcaa cgtcaagctc gacaaggccg gtggattgac
      661 cgaggccctc gccatggtag cggaggctcg gcggcaaggg ttcacgatca tggttggatg
      721 tatggtcgcc acttcgcttg cgatggctcc tgccattctg atcgcgcagc aagcccggtt
      781 tgtcgacctt gacgggccgc tcttgctcag ccgagatcgc cccaatggcc tgcgttacgt
      841 cgacagcatg gtatttccgc cctcgcccgc actttggggc tgaggtcagg cgatggaact
      901 cataggcgat cctgtccgcg ccgcctgatt tcgttcatga aatgtgccgg ggctttaact
      961 ttcttcgact tgttttcgaa atcaaagctt cccgtgggcg cccaggttgg cttagacttg
     1021 attctaagat cgcaccgccg gcctaggtag ggcgacgata acgggacggg gaaatgcaaa
     1081 ttcggggtct tgctttcggc gccgccgctt tggcgctcag cataacatcg gcgtccgcga
     1141 ccatgcggat ctcagaggac cgcggcggtc agataggtcg ctatctggaa gcgttcgcat
     1201 cggtgcgctc atcgggcgaa cgtgtcgtcg tcgacggaaa ttgcttgtcc gcttgcacgc
     1261 tggtgctcgg cgtcgttccg cgcgagcgca tctgcgccac gcagcgggcg cgcttcggct
     1321 ttcacgcggc ctggatgccg gaccgcgatg gaagaccagt gacaagccca ctgggcacgc
     1381 aagctctctg gagcatctat ccggcttcgg ttcggcggtg gatcacccgg cacggcggtc
     1441 tctcccgcaa gatgctcttc atgcagggtc aggacctcaa cggcatcgtg gcaagctgcg
     1501 atcgcgacgg tcgcgagcag gtgcggtcag cgcgccggct cacgccgaat ccggtgcgct
     1561 acgaatccgc aagcgccgcc agcgaccgcc gttagcgcca tcgcgatata cgcgccgctg
     1621 ccgaa
//
LOCUS       DATDHO010000064         3999 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_151570, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000064 DATDHO010000000
VERSION     DATDHO010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3999
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_151570"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            132..881
                     /locus_tag="VIY07_01175"
     CDS             132..881
                     /locus_tag="VIY07_01175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3365 domain-containing protein"
                     /protein_id="HEY6380396.1"
                     /translation="MTGIFAVALAAFAVSSYGLQPLHGQPSNDDVVVAESLSTLLQEA
                     RTVVSRHQNEINNPDVGDKGFTGAKVLAEAAKAYKAKTGVDLSSIDRSTKQGRLLRAQ
                     MDSIVEVVDANQETINRKGLGFKAFIPATFGRLVNEAFSRRAGQEADVKVTAPSDRIR
                     NLKARADPWEQKVITEKFLQASWPKGKEFSAITESKGRQAFRVAVPEYYAASCLSCHG
                     GPKGDIDVTGYPKEGGSEGDLGGVISISLYR"
     gene            891..3599
                     /locus_tag="VIY07_01180"
     CDS             891..3599
                     /locus_tag="VIY07_01180"
                     /inference="COORDINATES: protein motif:HMM:NF024267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6380397.1"
                     /translation="MTMMLRRLSIKTRILVVSAILMAILAGMTLYTTAQLAANSRAVA
                     ETAQLAGLSQLANQTRTAFGEYRYWLTDLAVSLLRLSELNAQAAKERLSAKLDELAGS
                     RPEVAATIKQELEQFERDATRAVEEYTADQRVIGNTFLASARQHSIAIDTRLTNFVNE
                     LNHEAAQARALLQADVARTRLIAAIAVTLAILLGLAATLVVLRSISRPLDDVVAAMAG
                     ITAGNLDTSIPKPALDEIGAMARTLELFRASIIERTKLSAHRDEQRRIIQTAIETISD
                     GFVLFDPDDRLVLCNSRFRELYPKLADLAQEGTPFSTILTVGVERGVIDTGGLPPQAW
                     ITERLRRHSKPEGIVEYHHGMIWARVSEQRTPDGSTVVVYTDVSELKQRQEELEEAMR
                     QAETANRAKSAFLANMSHELRTPLNAIIGLTEMMVSNAARFGTEKALEPLRRVHRAGK
                     HLLELINQVLDLSKIEAGKLELNPELVSIPRLFDEVAGTTRSLAEQNKNNLVVQCPND
                     VEPLYVDALRLRQILLNLLSNACKFTRNGKVTLSVAPASADGRAWLDFAVSDTGIGMT
                     PEQLDKLFEEFTQGDQSTARRYGGTGLGLAITRRLCRMMSGDVTVTSEPGKGSTFVVR
                     LPADAMTSPEATPAQADIADQSQPIGDCVLVIDDDATARELIANHLREEGFSVATANS
                     GRDGLKRAQELRPIAITLDVLMPDLDGWTVLAALRGNPELADIPVVMATITDQQRKGM
                     ALGAAGYLTKPIDRDQLVALLRPFQARARRTRVLMVEDDPAQRMSIRSVLEPQQWRVT
                     EADNGRVALEMLAKEIPDIILIDLMMPEMDGFQLITALRERPDWRRIPVIVITALDLT
                     AADRARLNSGVEGILLKNSFDPAHLVQTVRQAVANARRKNLSEVAS"
     gene            3596..3979
                     /locus_tag="VIY07_01185"
     CDS             3596..3979
                     /locus_tag="VIY07_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6380398.1"
                     /translation="MTKVLYVEDNDDNVYMMKMQFELLDGFEFLTAEDGEAGYVKARV
                     ELPDLILMDLDLPIVDGWELTRRLKSDSATRHIPVIALTAHAMPGSREQALAAGCDEF
                     DTKPINFERLMQKVEFLLGSGRAGG"
BASE COUNT          871 a         1141 c         1219 g          768 t
ORIGIN      
        1 aaaagaagaa cgcgtgatgg aagctttttt tgtcaaccgc cgctcctgat cagggtggca
       61 ggcgcgccgt tgcgcgcatg atcatctgca atcaatgggg aacaaggatg cctctgttgc
      121 gattccgttc agtgactgga attttcgcgg ttgcgctcgc tgctttcgca gtcagcagtt
      181 atggactgca accgttgcac ggtcagccaa gcaacgacga cgttgtggtg gcggaaagct
      241 tgtccacctt attgcaagag gcgcgaacgg tcgtgtcgcg acatcaaaat gaaatcaaca
      301 atcccgatgt tggcgacaaa ggcttcaccg gggcgaaggt gcttgccgaa gcggcaaagg
      361 catacaaggc gaagacggga gtcgatctgt ccagcatcga tcgatccacc aagcagggcc
      421 ggctgttgcg cgcgcaaatg gattcgatcg tcgaggtcgt ggatgccaac caggaaacga
      481 tcaacaggaa aggcctcggc ttcaaggcgt tcattcctgc gacgtttgga cggctggtga
      541 atgaggcgtt cagccggcgc gccggtcagg aagcggatgt aaaggtcact gccccttccg
      601 atcgcatccg caaccttaag gcacgcgccg acccctggga acagaaagtc atcacggaga
      661 agtttctgca ggcgagctgg cccaagggca aggaattctc ggccattacg gaaagcaagg
      721 gccggcaggc ctttcgcgtg gctgtgccgg aatattacgc ggcgtcatgt ctgtcctgtc
      781 atggcggccc caagggcgac atcgacgtga cgggctatcc caaagaagga ggcagcgagg
      841 gcgacctggg cggggtcatc agcataagcc tctatcgttg agcattcgcg atgacgatga
      901 tgctgcgacg gctaagcatc aagacccgga tcctggttgt tagtgcaatc ctgatggcca
      961 tcctcgcggg gatgacgcta tacacgacgg cgcagctggc cgcgaattca cgagcggttg
     1021 cggagaccgc ccagcttgcg ggactgagtc agcttgccaa ccagacccgc accgctttcg
     1081 gcgaatatcg ttactggctg accgaccttg cggtcagcct tttgcgcctg tccgaactga
     1141 atgcccaggc agcgaaggaa cgactgtcgg ctaagctcga tgagctggcc ggcagccggc
     1201 ccgaggtcgc cgccacgatc aagcaggaac tggagcagtt cgaacgcgac gccacgcggg
     1261 ctgtcgaaga gtatacggcc gaccagcgcg tgatcggcaa tactttcctt gcctcggcgc
     1321 gtcagcacag catcgcgatc gacacacgac tcacaaattt cgtaaatgaa cttaaccacg
     1381 aggcggcgca agcgcgcgcc ttgttgcagg cggacgtggc ccgcacgcgc ctgatcgcgg
     1441 ccattgccgt gacccttgcc attctcctgg gattagcggc aaccctcgtc gtgctgcgct
     1501 cgatctccag gcccctcgac gatgtggtcg cggcgatggc cggaatcacg gccggcaatc
     1561 ttgacacctc tattcccaag ccggcgctcg acgaaatcgg cgcgatggct cgtaccctcg
     1621 agctctttcg ggcgagcatc atcgaacgga caaaactttc ggcgcacaga gacgaacagc
     1681 gccggataat tcaaacggca atcgagacga tctcggacgg ctttgtgttg ttcgatcctg
     1741 atgatcgtct cgtcttgtgc aacagcaggt ttcgcgagct ttatcccaaa ctcgccgacc
     1801 tggctcagga gggaacgcca ttctcaacaa ttctcacggt cggcgtagag cgtggcgtaa
     1861 tcgacaccgg aggccttccg ccacaggcat ggattaccga gcgattgcga cggcacagca
     1921 agcctgaagg tattgtcgag tatcaccatg ggatgatttg ggcgcgcgtc agcgagcagc
     1981 gcacaccgga cggaagcact gtagttgtct acaccgatgt ttcagagctc aagcagcgcc
     2041 aggaagagct cgaagaagcc atgcgacagg ccgagaccgc caaccgcgcg aaatcggctt
     2101 ttctcgccaa catgagccac gagcttcgca cgccgctcaa tgcgattatc ggcttgaccg
     2161 agatgatggt gagcaatgcg gcacgcttcg gcaccgaaaa ggcactggag ccgttgcgac
     2221 gggttcaccg cgccggcaag catcttctcg agcttatcaa tcaggtgctc gacctgtcga
     2281 agatcgaggc cggcaagctt gagctcaatc cagaactggt gagcattcct cgcctgttcg
     2341 acgaggtcgc gggaactacg cgatccctcg cggagcagaa taagaacaat ctcgtcgtgc
     2401 aatgcccaaa cgatgtcgag cctctttacg tcgacgcgct gcgcctgcgt caaatcctcc
     2461 tcaatctttt gagtaacgcc tgcaaattca ccaggaatgg caaagtgacg ctgtcggtag
     2521 ctcccgcatc ggcggatgga cgggcgtggc ttgattttgc cgtatccgac accgggatcg
     2581 gcatgacccc ggaacaactg gacaagcttt tcgaagagtt cacgcagggt gatcagtcga
     2641 ctgcgcgccg ttatggcgga acgggcttgg gtctagcgat cacccgcagg ctgtgtcgca
     2701 tgatgagcgg cgacgttacc gtcacgagcg aaccgggcaa gggctcgacg tttgtcgtgc
     2761 gactaccggc agacgccatg acgagccccg aagcaacacc ggcgcaagcg gatattgcgg
     2821 atcaatctca gccaatcggc gattgcgtgc tggtcatcga tgacgacgcg acggcgcgcg
     2881 aactcattgc caatcatttg cgtgaagaag gattctcggt cgcgacggcc aacagcggcc
     2941 gcgatggctt gaagcgtgca caagagctcc ggccgatcgc aatcacgctc gatgtgctca
     3001 tgcccgatct cgacgggtgg accgtcctgg cggcgttgcg cggcaatcca gagcttgccg
     3061 atattccggt tgtcatggcg acgatcaccg accagcagcg aaaaggcatg gcgctcggcg
     3121 ctgctggtta cctcaccaag ccgatcgatc gagatcagct ggttgcactg ctgcggccat
     3181 tccaggctcg cgcgcggcga acgcgcgtgc ttatggtcga ggacgacccg gctcaacgga
     3241 tgtctattcg gtctgtgctg gagccccagc aatggcgcgt gaccgaagcg gacaatggca
     3301 gggtagcgct cgagatgctc gcaaaagaga ttccggacat catcttgatc gatttgatga
     3361 tgcccgaaat ggacgggttc cagctgataa cggcattgcg ggagcgccct gactggcggc
     3421 gcattccggt catcgtaata acggcgcttg acctcacggc agccgatcgg gcccgactta
     3481 attccggagt cgagggcatt ttgctgaaga attcgttcga ccccgctcac ctcgtgcaga
     3541 cggtgcgcca ggcggtggct aatgcgcgcc gaaaaaattt gtcggaggtt gcttcgtgac
     3601 gaaggttctt tacgtcgagg acaatgacga caatgtctac atgatgaaaa tgcaattcga
     3661 attgcttgac ggattcgaat ttctgacggc tgaggatggt gaggcgggat acgtcaaggc
     3721 gagggtcgag ctaccggatc tgatcctgat ggacctggat ttgccgatag tcgacggctg
     3781 ggaattaacc cgccggctta aaagtgattc agcaacccgt cacatcccgg tgattgccct
     3841 gaccgcgcac gcgatgccgg gttctcgcga gcaggcgctt gccgccggct gcgacgagtt
     3901 cgatacaaaa ccgatcaatt tcgaaaggct catgcaaaaa gtcgaatttc tccttgggag
     3961 cggccgcgca ggcggataag ggacagtcgc gtatcagtc
//
LOCUS       DATDHO010000065         2157 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_52030, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000065 DATDHO010000000
VERSION     DATDHO010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52030"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..219)
                     /locus_tag="VIY07_01190"
     CDS             complement(<1..219)
                     /locus_tag="VIY07_01190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016209 - antioxidant activity [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin domain-containing protein"
                     /protein_id="HEY6380399.1"
                     /translation="MTLAIGDSAPDFEAETTEDKIRFHDWLGNSWGVLFSHPKDFTPV
                     CTTELGTMARLKPEFDKRNVKILGLSVDP"
     gene            586..1872
                     /locus_tag="VIY07_01195"
     CDS             586..1872
                     /locus_tag="VIY07_01195"
                     /inference="COORDINATES: protein motif:HMM:NF024592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4010 domain-containing protein"
                     /protein_id="HEY6380400.1"
                     /translation="MDLQELLSRFAVALGIGLLIGLERGWRMREMQSGSRTAGIRTFA
                     VSGLLGAVAAALSQAAGTGAGFVLGASFAAFAAVMIVFCREENKASGNFSATTAIAAI
                     LTFSLGAFALIGDMRVAAAAAVATAGILAAREDIHGWVAKITWPELRSALVLLAMTFI
                     VLPIVPDDPIGPFGGVNPREIWLIAIVLAAVSFLGYLGVRVLGTRRGLLVSGAAGGLA
                     SSTAVTVANARHSIAGEGDPALLAGGVALASAISFLRVTVIVAVLHWALLRSVAPPLV
                     AATVVAIALSLLPLRWQTGRNNKAAQRTAFRNPFAFWSVVGFAIFLGIIVVAGRAISE
                     RAGATGAILGAAAMGIADVDAITVSIASLGSRVLSDQSAAFAILSAVATNMLTKLAIG
                     AAIGSGRFALYLAIVSVACFVAAGIALWLTLVFLPP"
     gene            1942..>2157
                     /locus_tag="VIY07_01200"
     CDS             1942..>2157
                     /locus_tag="VIY07_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HEY6380401.1"
                     /translation="MFKRILIANRGEIACRIIKTARKMRIETVAVYSEADRDALHVAM
                     ADAAVAIGPPLAAESYLVIENIIAACKH"
BASE COUNT          380 a          645 c          654 g          478 t
ORIGIN      
        1 cggatcgacc gatagcccga gaatcttcac gttgcgcttg tcgaattccg gtttgagcct
       61 ggccatggtg cccagctccg tagtgcagac gggagtgaaa tccttcggat gcgagaacag
      121 gacgccccag gaattgccga gccagtcatg aaagcgaatt ttgtcttctg tcgtttcagc
      181 ctcaaaatca ggtgcggaat cgccgattgc taatgtcatc accaacctcc actcgaatgg
      241 ctacacattc gttcggtaat atagtcgccg ggtccgccga ggaacaggga cggccaaaga
      301 gcatcgcttc gccgtaatcg tgctcgccgg agaacaaagc tttgcgctaa cacgccggac
      361 ggataagctt ttttctacgc ggtagcaaga tcagcggctg gcgttggccg gatcgaacag
      421 cagaaaaatg ccgctcgcga ttgagatcgc ggccatcgag cgaagcgaca ttgccggtgc
      481 tccgaacatg tccatgggca tgccgccgta gatacctttg ctgcaagaca ctattgtaac
      541 agccggcgat gatctgcggc cattttccca aattttgggc ggcttatgga tctgcaagag
      601 ctgttgtcac gatttgccgt ggcgctcggg atcggtctgc tgatcggcct cgaacgcggc
      661 tggcggatgc gcgaaatgca aagcggttcg cggaccgcgg gcattcgtac ctttgccgtg
      721 tcgggtttgc tgggcgcggt cgcagccgcc ctgtcacagg ccgccggtac cggcgcgggg
      781 tttgtgctcg gagccagctt tgcggcgttt gccgctgtga tgatcgtgtt ctgccgtgag
      841 gaaaacaagg cgtccggcaa tttctcagcc acgactgcga tcgccgccat tctcacattt
      901 tcactcggag ccttcgcgct gatcggcgat atgcgcgtgg cggctgctgc tgctgtggcg
      961 acagcaggca tcctcgcggc gcgcgaggac atccatggct gggtcgcaaa gatcacatgg
     1021 cccgaattgc ggtctgcgct cgttcttctg gcgatgacgt ttatcgtttt gccaattgtg
     1081 cccgacgacc cgatcggacc gtttggcgga gtgaatccgc gcgaaatttg gctgatagcg
     1141 atcgtgctcg ccgcggtttc atttcttggc tatctcggcg tacgcgtgct tggaactcga
     1201 cggggccttc tggtgtccgg cgccgccggc ggtctcgcat catcgacggc cgtcaccgtc
     1261 gccaacgccc ggcattcgat cgccggggaa ggtgatcctg ctcttcttgc cggcggtgtc
     1321 gcgctggcaa gtgcgatctc atttctacgg gtgacggtga tcgttgcagt gcttcactgg
     1381 gcgctcctgc ggtcggttgc gcccccgctg gttgccgcca ccgtggttgc catcgcgctg
     1441 agcctgttgc cgttgcgatg gcagacggga cgtaataaca aggctgccca acgaaccgcc
     1501 tttcgcaatc cctttgcttt ctggtcggtc gtcggcttcg ccattttcct cggcatcatt
     1561 gttgtcgccg gccgcgcgat cagcgagcgc gcgggcgcaa ccggtgcaat cctcggtgcg
     1621 gccgcaatgg gaattgcgga cgtcgacgcc atcaccgttt cgatcgccag cctcggctcg
     1681 cgggttctgt ccgaccagag cgcggcattc gctatcttgt cggcggtggc gacgaatatg
     1741 ttgaccaagc tggcgatcgg cgcggccatc ggaagcggac gcttcgccct ctacctggct
     1801 atcgtgtcag tagcctgttt cgtagccgct ggaattgcac tctggctgac gctcgttttc
     1861 ctgccaccat agagcgcaat tgactttttc gcgataacca cgcaagccaa aaggccggca
     1921 tctggggtcc actgacacgg catgttcaag cgtatcctca tcgccaatcg cggcgaaatc
     1981 gcctgccgga tcatcaagac cgcacgcaaa atgcgcatag aaacggtcgc cgtctattcg
     2041 gaggccgaca gggatgctct gcacgttgca atggcggatg ccgctgtcgc aatcgggcct
     2101 ccgctcgccg ccgaaagcta tctggtgatc gagaacatca ttgccgcctg caaacac
//
LOCUS       DATDHO010000066         1764 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_52031, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000066 DATDHO010000000
VERSION     DATDHO010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52031"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(314..>1764)
                     /locus_tag="VIY07_01205"
     CDS             complement(314..>1764)
                     /locus_tag="VIY07_01205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6380402.1"
                     /translation="NVLQYPVVLVGILRAGYTVVNTNPLYTARELEGRLTDSGAEAII
                     VLENFAHTLEQVIARTSVKHVVVASMGDLLGMVKGTVVNFVVRWAKKMVPAYTLPGVT
                     PFNAAIAAGKGMLLNRPQLGPDDIALLQYTGGTTGIAKGAILQHRNLVANMLQIEAWL
                     QPVLEKEPKVDQLVVLAALPLYHIFGFTACFLLSIHAGGQCILIPNPRDIPNLIKELA
                     KSNVNYFPGINTLFNALLNHPDFGKIDWSMLKCTVGGGTAVQQSVAERWIRATGCPIL
                     EGYGLTETSPVLTCKPATATEWSGTIGLPLPSTDISIRDDDNNEVPVGERGEICARGP
                     QVMAGYWRHPDQTAEAMTPDGYLRTGDIGIIDEVGRVRIVDRKKDMISVSGFNVFPSE
                     VEAVASGHPGVRECAAIGVPDVRSGERVKLFVVRNDPNLTEEELLAYCQAHLTNYKVP
                     KSVEFKAELPHTYIGKVLRRQLRDEKQQPKAT"
BASE COUNT          341 a          530 c          523 g          370 t
ORIGIN      
        1 ccacgcgctg ggcagaaagt gctgagcttg caaagcctgc cgagcagaac catgccgtcc
       61 accccagagc tgcgtgtcaa cgcgcacggc tttagcctcc atgcggcgaa aagctcgttt
      121 aaaaatcata tccattcata ccggcgatga tgagaactgc gtttacgcta cagctcaccc
      181 ttgatcgtcc ctgtcgccgc catgatagcc ggattttagc ggcagagccg ctcagaataa
      241 aactgcgaac ccgtgaaaca gccagataat tttctggcca tctgcttagt tcattagcca
      301 gccgattgtc aggctatgtg gctttcggct gttgtttttc atcccgcaat tgccgacgca
      361 ataccttgcc gatgtaagta tgcggcagct ccgctttgaa ctccactgat ttcgggacct
      421 tgtagttagt gaggtgcgct tggcagtacg cgagcagctc ctcttcggtg aggttgggat
      481 catttctgac cacaaacagc ttgacccttt ccccggaacg cacatcgggc accccgatcg
      541 cggcgcattc gcgcacaccc ggatggccgg acgccacggc ctcgacctcg ctcgggaaga
      601 cgttgaatcc ggaaaccgag atcatgtcct tcttgcggtc gacgatcctg acccggccca
      661 cctcgtcgat gatgccgata tcaccggtgc ggagatagcc gtcaggcgtc atggcctcgg
      721 cggtttggtc aggatggcgc caatagccgg ccatgacctg cggaccgcgg gcgcagattt
      781 ccccgcgctc gccgaccgga acctcgttgt tgtcatcgtc gcgaatggag atgtccgtcg
      841 acggtagggg cagcccgatc gtgccgctcc attcggttgc ggtcgcgggt ttgcaggtca
      901 gcaccggcga agtctccgtc agaccgtagc cttccaggat cggacagccg gtagccctga
      961 tccagcgctc cgctaccgat tgttgtaccg ccgtgccgcc gccgactgtg cacttcagca
     1021 tgctccagtc gatctttccg aagtccggat gattgaggag agcgttgaag agcgtattga
     1081 tgccgggaaa gtagttgacg ttggacttcg cgagttcctt gatgaggttc ggaatatcac
     1141 gcggattggg tattagaatg cattgacccc cggcgtggat gctcagcagg aagcacgcgg
     1201 tgaatccgaa gatgtgatag agcggcaacg ccgccaggac gaccagttga tcgaccttgg
     1261 gctccttttc cagcaccggc tgtagccaag cctcgatctg cagcatattg gcgacgaggt
     1321 tgcgatgctg caggatcgcg cctttggcga tcccggtggt tccgcctgtg tattgaagga
     1381 gggcgatgtc gtcgggacca agctgcggcc tgttcagcag catccccttg ccagcggcga
     1441 tcgctgcatt gaacggcgtg acgcccggca gcgtataggc cggaaccatc ttcttcgccc
     1501 accgcacgac gaaattgacg acggtgccct tcaccatgcc cagcaggtcg cccatggagg
     1561 cgacgacgac gtgcttgacg ctggttcggg caatcacctg ctccagcgtg tgcgcgaagt
     1621 tctcgagcac gatgatcgcc tcggcgccgg aatccgtgag ccgcccctcg agctcgcggg
     1681 ccgtgtacaa ggggttggta ttcaccacgg tatacccggc ccgcagaatg ccgacgagga
     1741 ctacgggata ttgcagcaca ttgg
//
LOCUS       DATDHO010000067         3806 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_300134, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000067 DATDHO010000000
VERSION     DATDHO010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3806
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300134"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1016)
                     /locus_tag="VIY07_01210"
     CDS             complement(<1..1016)
                     /locus_tag="VIY07_01210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0140663 - ATP-dependent FeS chaperone
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEY6380403.1"
                     /translation="MSVSKQDVLAALAKLSSPDGTALTDSRVLSDVVVSDGKVFFSLT
                     VDAGAVKAWEPVRKMAEDAVRNLPGVQSALVALTAERAPGGARTTQAAQRGQQHARAA
                     HPADKVQPGIPGVEAVIAVASGKGGVGKSTTAVNLALGLRDLGLKVGMLDADIYGPSL
                     PKLLAIREKPQTIGGTRLKPIDRYGLSVMSIGFLIDEETPMIWRGPMVMSAITQMLRD
                     VEWGNLDVMVVDMPPGTGDAQLTMAQQVPLKGAVIVSTPQDLALIDARRGVAMFKRVN
                     VPVLGVVENMSYFLCPTCGTRSDIFGHGGAQKEAERLGVPFLGEVPLHMSIREKSDAG
                     LPVVA"
     gene            1178..2053
                     /locus_tag="VIY07_01215"
     CDS             1178..2053
                     /locus_tag="VIY07_01215"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6380404.1"
                     /translation="MTMAKVAFLGLGVMGYPMAGHLKNKGGHDVTVYNRTAAKAEQWV
                     KQYGGKSAPTPKAAAEGQDLVMACVGNDNDLREVTLGPNGAFAGMGKGKVFVDHTTAS
                     AEIARELYAAAKKSGFDFIDAPVSGGQAGAENGTLTVMCGGDPEPFGRAEKVIVAYAR
                     ACNLLGSTGSGQLAKMVNQICIAGLVQGLAEGLHFAKKSGLDIEKLIATISKGAAQSW
                     QMENRYKTMAAGKFDFGFAVDWMRKDLGICLGEARKNGAQLPVTALVDQFYSEVQATG
                     GRRWDTSSLIARLER"
     gene            complement(2104..2715)
                     /locus_tag="VIY07_01220"
     CDS             complement(2104..2715)
                     /locus_tag="VIY07_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008875843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEY6380405.1"
                     /translation="MKLYDSKFAPNPRRARIFLAEKGISLPTEQIDIAARQHKTPEYA
                     AINPLQRMPALVLDDGTIITESIAICRYFEMLHPEPPMFGVGPKDSALVEMWNRRAEI
                     NFFANVAAVFRHTHPAMKELEVPQVPAWADANRPRVAWFLEMLDGELANREFIAGDRY
                     TVADITVQVAADFMKPARLVMPEGVANVKRWHTAVSARPSAGA"
     gene            2893..>3806
                     /locus_tag="VIY07_01225"
     CDS             2893..>3806
                     /locus_tag="VIY07_01225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HEY6380406.1"
                     /translation="MPIPGEQPDLAALPPEGSPVKRRLAAQYVREARDRLTSTSGTRP
                     AFDHELLRQYAQNRISASLIILLLVGTVGFLSSVWSGVLTACIWTAGVLVIHAVMIAK
                     CRQFLERPMHESSTRAWRLRFVLLDLFYGLAWTFILIDPFGIDEGASTFMLFVMLLVV
                     AVSSMLASGLPTAVFAATFPVTTAVALDFILQGKLRDYVLAFMALTAQGYFAALTYRL
                     YSSTLATLQARAEKDALIGELEQAKAISDEARRRAEAANIAKSRFLAQMSHELRTPLN
                     AILGFSEVMKTEIFGAHAVLAYREYSSD"
BASE COUNT          763 a         1145 c         1117 g          781 t
ORIGIN      
        1 gcgactaccg gcagaccggc gtccgatttt tcgcggatgc tcatgtgcag cggaacctcg
       61 ccgagaaacg gaacgccgag acgctccgct tccttttggg ccccgccatg accgaagata
      121 tcagaccgcg tgccgcaggt cggacagagg aagtaactca tgttctccac gacgccaagt
      181 acggggacat tcacccgttt gaacatggcg acgccccgcc gcgcgtcgat tagcgcaagg
      241 tcctgtggcg tggaaacaat caccgccccc ttcaacggca cttgctgcgc cattgtaagt
      301 tgcgcgtctc cggtgccggg cggcatatcg acgaccataa cgtcgaggtt gccccactcg
      361 acatcgcgca acatctgggt aatcgcggac atcaccatcg gccctcgcca gatcattggc
      421 gtctcttcgt cgatcaggaa tccaatcgac atcacgctga ggccatagcg atcgatcggt
      481 ttgagacggg ttccgccgat ggtctgcggt ttttccctga tggccagcaa ttttggcaag
      541 gacggcccgt aaatgtcggc atcaagcatg ccgaccttca gacctagatc gcgcaggcca
      601 agtgccaggt tgaccgcggt ggtcgacttg ccgacgccgc ccttgccgga agcgacggca
      661 atgacggcct ccacgccagg aatgcccggc tggaccttgt cggctggatg ggcggcgcgg
      721 gcgtgctgct gccccctctg cgccgcctgt gtcgtgcgcg cgccccctgg tgcccgttct
      781 gctgtcaggg ctaccagagc cgactgcacc cccggcaaat tgcgtacagc gtcttctgcc
      841 atcttgcgca caggctccca cgccttcacc gcccccgcgt cgaccgtcaa cgagaaaaag
      901 acttttccat cggaaacgac gacatcggaa agcacgcgac tatccgtcaa tgccgtgccg
      961 tccggcgaag atagcttggc cagcgctgcc agaacgtcct gcttgcttac cgacatgtcc
     1021 gtcgtccgtt tgccggcgca ccataggcga ccctgcggtc cggtcaatgc gacacgcaca
     1081 atcaagaccg ttgacgcgca tgccccggca atgacctatt ggcagatagg cacgggcggt
     1141 ggccggccaa gagttagttg gaatttttga aggagacctg acgatggcga aagtggcgtt
     1201 tctgggcctc ggagtcatgg gctaccccat ggcgggacac ttgaaaaaca agggcggcca
     1261 cgacgtgacc gtatataacc ggaccgccgc caaggctgag cagtgggtca agcagtacgg
     1321 cggcaaatcc gcgcctactc caaaggccgc agccgaaggc caggatcttg tgatggcctg
     1381 cgtcggaaac gacaatgatt tgcgggaagt gaccttaggc cccaatggcg ctttcgcggg
     1441 catgggcaaa ggcaaggtct ttgttgacca caccaccgct tcggctgaaa tcgcacgcga
     1501 actttacgcg gccgccaaaa agagcggttt cgatttcatc gacgcgccgg tttcgggtgg
     1561 ccaggccggt gccgagaacg gcaccctaac cgtgatgtgc ggaggcgacc ctgaaccttt
     1621 cggtcgcgcc gaaaaagtca tcgtagctta tgcgcgcgct tgcaacctgc tcggctccac
     1681 cggatcggga caactggcga agatggtcaa ccagatctgt attgccggat tggtgcaggg
     1741 tttggctgag ggtctgcact tcgccaaaaa gtccgggctc gatatcgaaa agctcattgc
     1801 cacgatctcg aagggagcag cgcaatcatg gcaaatggag aaccgctaca agacgatggc
     1861 cgcgggcaag tttgacttcg gctttgcggt tgattggatg cgtaaggacc tcggcatctg
     1921 tctgggcgaa gcacgcaaga atggcgcaca actgcccgtg acagcgttgg tcgatcaatt
     1981 ctactcggaa gttcaggcaa cgggaggcag gcgctgggat acgtccagtc tgatcgcgcg
     2041 cctcgaacgc tgatcaagag cattcgcaca caatcgattc accactaaag ccgtattccg
     2101 gaatcatgcg ccggcgcttg gtcgtgccga gacggcggtg tgccatcgct tcacattggc
     2161 gacaccctct ggcatgacca gccgcgccgg cttcatgaaa tccgctgcaa cctgcacggt
     2221 gatgtcggca accgtatagc gatcgccggc aatgaattcg cgatttgcca gttcaccatc
     2281 tagcatttcg aggaaccacg cgactcgcgg cctgttcgca tcggcccagg caggcacttg
     2341 cggcacttca agttccttca tcgccgggtg cgtatggcga aacacggccg cgacgttggc
     2401 gaagaaattg atttcagccc gacgattcca catttcaacg agcgccgaat ccttggggcc
     2461 gacaccgaac atcggcggct ccggatgcag catctcgaaa tagcggcaga tcgcaatcga
     2521 ttccgtgatt atcgtgccgt cgtcaagcac caaggctggc atgcgctgca atggattgat
     2581 cgcggcatat tcgggcgtct tgtgctgtcg ggctgcaata tcgatttgct cggtcggcag
     2641 tgagatgcct ttttcggcga gaaaaatacg cgcgcggcgg ggatttggcg cgaacttgct
     2701 gtcatagagc ttcatttgag gcccccgtct tcgaagtgcg gtctgcctcg gcacagccga
     2761 acacgggcac gaaccggtgt caaaaggcct gtaagcaatc gttaaccaga gtccttagcg
     2821 accccttaag ggtcgtttta aggattttgc gcaacgctgc cgccagtctt tgccaggttc
     2881 cagttcattt taatgccaat tccaggcgaa caacccgatc ttgccgccct gcccccggaa
     2941 ggctcgccgg tgaagcggcg tctcgccgcg caatatgtgc gggaagcacg cgatcgcctg
     3001 acctcgacca gcggcacccg gccggcgttc gatcacgagt tgctccgcca atatgcccaa
     3061 aatcggattt ctgcgtcgct gataattctg cttctcgtcg ggaccgttgg cttcctgtcc
     3121 agcgtatgga gcggtgtgct gacggcctgt atctggacag cgggggtgct ggtcatccac
     3181 gcggtcatga ttgccaagtg ccggcaattc ctcgaaaggc cgatgcacga gagctcaaca
     3241 agggcatggc gattgcgttt cgtcttgctc gatctgttct acggcctggc ttggacattt
     3301 atcctgatcg acccgttcgg catcgatgag ggtgcaagca cgttcatgct gtttgtcatg
     3361 ctgctcgtgg tggctgtatc gagcatgctc gcctcgggcc tgccgaccgc tgtttttgcc
     3421 gccacttttc ctgttacgac cgcggtcgcc ctcgacttca tcctacaagg aaaattgcga
     3481 gactacgtcc tcgcctttat ggctttgact gcgcaagggt acttcgccgc gctgacctat
     3541 cgcctctatt cgagcacgct ggcgacgctg caggcgcgcg cggaaaaaga cgcattaatc
     3601 ggagaactgg agcaggcgaa ggcgatctcc gacgaagcgc gccggcgtgc cgaggccgcc
     3661 aacatcgcca agtcgcgttt ccttgcccag atgagtcacg aattgcgcac gccgcttaat
     3721 gccattcttg gtttctccga ggtaatgaag actgagattt tcggcgcgca tgcggttctg
     3781 gcttacaggg aatattcttc cgatat
//
LOCUS       DATDHO010000068         1963 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_300145, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000068 DATDHO010000000
VERSION     DATDHO010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300145"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(11..>1963)
                     /locus_tag="VIY07_01230"
     CDS             complement(11..>1963)
                     /locus_tag="VIY07_01230"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6380407.1"
                     /translation="NETRPISDARMALEASAPSIHAEAPGNVILEGKVKTPGFDEAWA
                     GANKIIKLEARSRRQNATPMEPRCGHASYEASSGRVTLTCSTQMPHLTRTAICDVLGF
                     PESDLRVIAPDVGGGFGQKMSLAGEYVVLVWLARKLKASVAWTEDRRENLIAAFHSRD
                     QYVTLEGAFDRNARLTALKADILANVGAYSCFPTTCGVEPLMAMAELPGPYDVQQYQC
                     LARGVLTNTCTMAPYRGVSRPVITFTIERLMDKAARVFGIDPVDIRRRNLVDRFPYKS
                     AMGLEYDEATYKEAMEMAVKAIDLPGFRKRQKDARATGRHLGIGFSTFCERTGYGSPA
                     FAARGMEITPGWETVIVTVDPSGFVEARIGSSPHGQGLRTTLAQIIADELGLTPEMIR
                     VVHGDTDRTPYGWGTFAARSLVISGGATLIAARKVRATLLKIASHLLEAAPDDILLAD
                     GMAKVAGTDRTIPIAKLAREAYMQTHRFKGEIEPGLSETGHYDPPGTFSNACHVAIVE
                     VDVETGHVTVEKFLVAEDAGRIINPMIADGQVHGGVAQGIGNALLEEIIYDDNGSILT
                     ASLADYLPPTAHEIPEIELHHIETPSQNSITRAKGLGEGGTIGAPAAVINAINDALSP
                     FGVEIDELPATPQRIRALLRAGEKAV"
BASE COUNT          342 a          594 c          612 g          415 t
ORIGIN      
        1 tgtggtctgc tcatactgcc ttttccccgg cccgcagcag ggcgcggatt ctttgcggcg
       61 tcgccggcaa ctcgtcgatc tccactccga agggcgacaa cgcatcattg attgcgttga
      121 tgaccgcagc cggggctccg atcgtgccgc cttcccccag acctttggcg cgcgtgattg
      181 agttctggct tggggtctct atgtggtgaa gttcgatttc cggaatttcg tgcgcagtcg
      241 gcggcagata gtcggccaga cttgccgtga gaatactgcc gttatcgtcg tagatgattt
      301 cctcgagcag cgcattgccg atgccctgcg cgacgccgcc atgcacctgt ccgtcagcga
      361 tcattggatt gatgatgcgg cccgcgtcct ccgccaccag gaatttctca accgtgacat
      421 ggccggtctc aacgtccacc tcgacgatgg cgacgtggca ggcgttggaa aatgtgccgg
      481 ggggatcgta atggcctgtt tccgaaaggc cgggctcaat ctcgcctttg aagcggtgcg
      541 tttgcatata cgcttcgcgt gcaagctttg cgatcgggat ggtccggtcg gtgcccgcga
      601 cttttgccat tccatcggca agcaaaatgt cgtccggtgc agcctcgagc agatgactgg
      661 cgatcttgag cagcgtggcg cgaacttttc gcgcggctat caaggtggcg ccgcccgaga
      721 tgacgagcga acgggcggcg aaggtgcccc agccataagg cgtgcggtcg gtatcgccgt
      781 gcacgactct gatcatctca ggcgtaagcc cgagctcatc ggcgatgatc tgggcgagtg
      841 tggtgcggag gccctggccg tggggtgagg agccgatccg cgcctcgaca aaccccgaag
      901 ggtcgacagt cacgatcacc gtttcccaac ccggcgtgat ctccatcccg cgcgcagcga
      961 aggccgggct tccgtacccg gtgcgttcgc aaaatgtcga aaagccgatg ccaaggtgtc
     1021 ggcccgtggc acgcgcgtct ttttggcgct tgcggaagcc gggcaagtcg atggccttca
     1081 cggccatctc catcgcttcc ttgtaggtcg cctcgtcgta ctcgaggccc atggcggatt
     1141 tgtagggaaa tcgatcaaca aggttgcggc gacgtatgtc gactggatcg atcccgaaaa
     1201 cgcgcgcggc cttgtccatc agacgttcga ttgtgaacgt gatcactggc cgtgacacgc
     1261 cgcgataagg cgccatcgtg caggtgttgg tgagaacgcc gcgcgcgagg cattggtact
     1321 gctgcacatc gtatggccca ggcaattcag ccatcgccat caacggctcc accccgcagg
     1381 tcgtgggaaa gcaggagtag gcgccgacgt tcgcgaggat atcggctttc agtgcggtca
     1441 gccgtgcgtt cctgtcgaaa gcgccctcga gcgtgacgta ttgatcgcgc gaatgaaaag
     1501 cggcgatgag attttcgcgt cgatcttccg tccacgccac cgacgccttc agctttcgcg
     1561 ccagccacac cagcacgaca tattcgccgg caagcgacat tttttgcccg aatccgccgc
     1621 ccacatcggg cgcaatgacg cgcaggtcgg attcggggaa cccgagcaca tcgcagattg
     1681 cggtgcgcgt caggtgcggc atctgcgtgg agcaggtaag cgtgacacgc ccgctcgacg
     1741 cttcatatga ggcatggccg cagcgcggtt ccatcggggt ggcgttctgc cgccgcgatc
     1801 gggcttccag cttgatgatc ttatttgcgc cggcccacgc ctcgtcgaag ccgggtgttt
     1861 ttaccttgcc ctcaagaatg acattgccgg gcgcttccgc gtgtattgaa ggcgcactcg
     1921 cttcaagtgc catgcgcgcg tcacttatgg gccttgtttc att
//
LOCUS       DATDHO010000069         2701 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_349610, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000069 DATDHO010000000
VERSION     DATDHO010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2701)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2701)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2701
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_349610"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..485)
                     /locus_tag="VIY07_01235"
     CDS             complement(<1..485)
                     /locus_tag="VIY07_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6380408.1"
                     /translation="MDASPLLAVRELHAGYGETEVLRGVDIAVDAGEIVAVLGSNGAG
                     KSTLNRAISGVLRSRKGSIRFAGHMIEHEKPASIVSRGLIHVPEGRCVFPNLSVKDNL
                     DLGSYRRGSGQRRQNRERVFGIFPRLAQRQSQRAGSLSGGEQQMLAIGRGLMAEPVLL
                     IL"
     gene            complement(475..1227)
                     /locus_tag="VIY07_01240"
     CDS             complement(475..1227)
                     /locus_tag="VIY07_01240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380409.1"
                     /translation="MADPLLMVDSVTCRFGGLLAVNGASLAALEGRITALIGPNGAGK
                     TTLFSIISGFVRAAEGTILYAGENVTGEPPYRLAQRGIARTFQIVQPFVGLSVRENIL
                     VGAHLRHRSRNAALAAADQIGHEVGLGELLARPADTLTVAGRKRLELARALATNPKML
                     LLDEVLAGLNPSEIRDIVPMIRDLCSRGITILMIEHVMQAVMSLAEHVFVLAEGRIIA
                     QGPPAQVVANPVVVEAYLGHGAAAKLGASNGR"
     gene            complement(1220..2215)
                     /locus_tag="VIY07_01245"
     CDS             complement(1220..2215)
                     /locus_tag="VIY07_01245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380410.1"
                     /translation="MKSLIPIAVVLAILAAVPFVVHSNVTLNFLVVALMIALAGQGWN
                     ILGGYGGQYSFGHAAFFGTGAYVTAILQMRYGINAWVGFAAGIAAAAALGAVLGALTF
                     RSGLRGSYFALVTLAFAEVLRIIASVAPITGAGVGTLIKLDLGLRSFQFQSRAVFYWI
                     ILALVGVSLVTAQLIERSRFGVWLVAVRENEDAAKALGVDANKVKLTAMVISAAITAA
                     AGCFYAQYFLFVDSGIAYGTWISVQALLTPIIGGVGTVFGPLLGALIVKSLGEAAKLV
                     AGDAPGLDLIIYGAVLVLVIWFAPRGLIGGLAHARRLLTRHSAPATSSTGEARHG"
     gene            complement(2212..>2701)
                     /locus_tag="VIY07_01250"
     CDS             complement(2212..>2701)
                     /locus_tag="VIY07_01250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380411.1"
                     /translation="AFQTIDVGWTFLAIPRVVGFVAAFAVALALWLLMTFTDIGRAIR
                     AVAKEKLGAELAGIDVWHVYAVTFGLGTACVAVAACLLIPTYYVNPHVGDAFVLVAFT
                     IVVLGGMGSVPGALIGALLVGVVESLSGLFLGESLGQIGIFLIFIVVLLVRPSGLFGA
                     RA"
BASE COUNT          625 a          863 c          805 g          408 t
ORIGIN      
        1 agaataagca agaccggctc ggccatcagc ccccgtccga tcgccagcat ttgttgctcg
       61 ccgcccgaaa ggctgcccgc ccgctgtgat tgtcgctggg caagacgcgg gaaaatgccg
      121 aaaacacgct cgcgattctg acgccgctgg ccggatcccc gccggtagct tccaagatcg
      181 agattgtcct tcacgctcag attgggaaac acacagcgcc cctccggcac gtgaatgagc
      241 ccacgcgaga cgatgcttgc cggcttctcg tgctcgatca tgtgcccagc gaagcggatt
      301 gagcctttcc ttgagcgcag aacgccggaa atcgcccggt tgagcgtcga ttttccggca
      361 ccattggagc cgaggacggc aacgatttct cccgcatcaa cggcgatatc gacaccgcgc
      421 agcacctcgg tttcgccgta acccgcatga agctcgcgaa cggcgagcaa ggggctagcg
      481 tccattcgat gctcccagct tcgccgccgc gccatggcca agataggcct cgacaacgac
      541 ggggttggca accacctgtg ccggcggccc ctgcgcgata atgcggcctt cggccagcac
      601 gaaaacgtgc tcggcgaggc tcatcaccgc ctgcatcacg tgctcgatca tcaggatggt
      661 gatgccacga ctgcacagat cacggatcat cggaacaatg tctctgattt ccgatggatt
      721 gagcccggcc aggacttcgt ccagcagcag catttttgga ttggttgcaa gcgcgcgcgc
      781 aagttcaagg cgtttgcggc cggcaaccgt caaggtatcg gccggtcgcg caaggagttc
      841 gcccagtcct acctcgtgac caatctggtc agcggcagcg agggcggcat tccggctgcg
      901 atgacgaagg tgagcgccga ccaaaatatt ctcgcgcacc gaaagaccga caaatggctg
      961 aacgatctgg aaggtgcgcg cgatgccgcg ctgcgcgagg cgatacggcg gctcgccggt
     1021 aacattctcg cccgcgtaaa ggatcgtgcc ctcggcggcc cttacaaatc ctgagatgat
     1081 cgaaaacagc gtcgtctttc cggcgccatt agggccgatc agcgcggtga tgcgtccttc
     1141 cagagcggcg agagacgcgc cgttgacggc cagcagcccg ccgaaacgac aggtcacgct
     1201 atcaaccata agtaaagggt cagccatggc gcgcctcgcc ggtggaggac gtggcaggcg
     1261 cgctatgacg cgtcaacagc ctgcgtgcat gcgcgagccc gccgatcagt ccacgcggtg
     1321 caaaccagat gacgagcaca agcaccgcgc cgtagataat aaggtcgagt ccgggcgcat
     1381 cgcctgccac gagctttgcc gcctcgccga gcgatttgac gatcaaggct cctaacagcg
     1441 gcccaaacac ggtgccgaca ccgccgataa tcggggtcag cagcgcctga accgaaatcc
     1501 acgtgccata ggcaattccc gaatccacaa agagaaaata ttgcgcgtag aagcatccgg
     1561 cagcggcggt gatggcggcc gaaataacca tcgccgtgag cttgaccttg tttgcatcga
     1621 cgccaagcgc ttttgccgca tcctcgttct cgcgcaccgc aaccagccaa acgccgaaac
     1681 gtgagcgctc gatcagttga gccgtcacga gagatacgcc gacgagcgcg aggatgatcc
     1741 agtagaatac ggcgcgactt tgaaactgga acgagcggag cccgagatcg agcttgatca
     1801 acgtgccgac gccggcaccc gtgatggggg cgacgctcgc gataatgcgc agcacctccg
     1861 cgaacgcgag ggtcaccagg gcgaagtagg acccacgcaa tcccgagcgg aaggtcagcg
     1921 cgccgagcac ggcgccaagc gcggctgcgg ctgcaatgcc ggcggcaaag ccaacccatg
     1981 cgttgattcc ataccgcatt tgcaggatcg cggtgacata ggcgccagtg ccgaagaagg
     2041 ccgcgtggcc aaaagagtat tgccccccgt agccgccgag gatgttccat ccctgccccg
     2101 ccagcgcgat catcagggcg acaacgagaa aattgagcgt gacattggaa tgcacgacga
     2161 acggcaccgc agccaaaatg gccagcacga ccgcgattgg aatcagagat ttcatgcgcg
     2221 ggccccgaac aagccgctcg gccgaaccag cagcaccaca ataaagatga gaaaaatgcc
     2281 gatctgccca agcgattcgc caaggaacag cccggacagg ctttcaacca caccgacaag
     2341 gagcgcaccg ataagcgcgc ccggcactga ccccatgccg ccgagcacga cgatcgtaaa
     2401 cgcaaccagc acgaaggcgt cgcccacatg cggattgaca tagtaggtcg ggatcagcag
     2461 gcaggctgcg accgcgacgc acgcggtgcc cagaccaaaa gtgacggcgt agacatgcca
     2521 aacgtcaatg cccgccagtt cggcgccgag tttctccttc gcgacggcgc gtatcgcccg
     2581 gccgatatcg gtaaacgtca taaggagcca gagcgcaagc gcgactgcaa atgcggcaac
     2641 aaaaccaacc acgcgcggga tagcgagaaa ggtccatcca acgtcgatcg tctggaacgc
     2701 g
//
LOCUS       DATDHO010000070         2176 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_2982, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000070 DATDHO010000000
VERSION     DATDHO010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2982"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..198
                     /locus_tag="VIY07_01255"
     CDS             <1..198
                     /locus_tag="VIY07_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEY6380412.1"
                     /translation="EYPQYTRPPVFEGEPIPEVLISGDHNKVKAWRRAESERLTSERR
                     PDLWAAYQARKTPKKRPESKG"
     gene            294..689
                     /gene="rplS"
                     /locus_tag="VIY07_01260"
     CDS             294..689
                     /gene="rplS"
                     /locus_tag="VIY07_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEY6380413.1"
                     /translation="MDIIQELEKEQIEKLSVGKEIPDFQPGDTLLVNVKVIEGDKSRV
                     QAYEGVCIGRSGRGINENFTVRKISYGEGVERVFPLYSPMIDSIRVLRRGKVRRAKLY
                     YLRGLRGKKARISEAQGAGGPEGAEVAPK"
     gene            942..>2176
                     /gene="leuC"
                     /locus_tag="VIY07_01265"
     CDS             942..>2176
                     /gene="leuC"
                     /locus_tag="VIY07_01265"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEY6380414.1"
                     /translation="MKPRTLYDKIWDDHLVDEQPDGTCLIYIDRHLVHEVTSPQAFEG
                     LRAAGRKVHAPDKTLAVVDHNVPTTDRTKPNPDQESAEQIAALAKNAKDFGIEYFNEF
                     DKRQGIVHIIGPEQGFTLPGTTIVCGDSHTATHGAFGALAYGIGTSEVEHVLATQTLI
                     QKKSKNMRAVVDGKLPVGVTAKDIILAIIGEIGTAGGTGYALEYAGEAIRSISIEGRM
                     TICNMSVEGGAKAGFIAPDEKAFTYLKDKPKAPKGKAWDEAMRYWETLRSDDGAHFDR
                     EIRLDAAKLPPLVTWGTSPEQVTSITGKVPVPSEIQDEKKRAAAERSLDYMGLKGGEK
                     ITDIRLDRVFIGSCTNSRIEDLREVARIVDGKRVNANVNAMIVPGSGLVKMQAETEGL
                     DKIFKASGFEWREPGCSMCL"
BASE COUNT          501 a          647 c          653 g          375 t
ORIGIN      
        1 gaatacccgc aatacacccg gccgccggtc ttcgaaggag aaccgatccc ggaggtgctt
       61 atctcgggtg accataacaa agtgaaagcc tggcgccgcg cggaatccga gcgactgacc
      121 tccgagcggc gtccggacct ctgggcggca taccaggccc gcaaaacgcc caaaaaacgg
      181 ccggaatcca aagggtgaca agcggaaagc tttgtaatac aagctccgcc aacccattca
      241 gaccagatca ggaccgcgcg ccggttgctg gcgctgccga cggagaatcc ataatggaca
      301 tcattcagga gctcgaaaaa gagcagatcg aaaaactttc ggttgggaag gaaattcccg
      361 actttcagcc gggcgacacc cttctcgtca acgtcaaggt gatcgaaggc gacaaatccc
      421 gcgtgcaggc ctacgaaggc gtttgcattg gccggtcagg ccgcgggatc aacgaaaact
      481 tcaccgtacg caagatttcc tacggcgagg gcgtcgagcg tgtgttccct ctttactcgc
      541 cgatgatcga ctcgatccgc gtcttgcgcc gcggcaaggt gcgccgcgcc aaactttatt
      601 acctgcgcgg actgcgcggc aaaaaagcgc gcatctccga ggcgcagggt gccggtggtc
      661 ccgaaggcgc tgaagtggcg ccgaaatagt tcagaccacc tgcgatatgc gaagggggcc
      721 gcatgcggcc cccttttttg cgattcgtcg gttcgttgtc gaaggcggat cgattggcta
      781 tataacgctc atggtttcca gagctcagcg gatcatcctg gccgatcaca ggcggttgcc
      841 gtggcgattt ttcggccggc tgacagccgt gcaggcggga ctttaatccg ccacgaaggt
      901 tgcgagccga tttccttcac tctgagcaaa gttatcaagc catgaaaccg cgtacgctct
      961 acgacaaaat ctgggacgat cacctggtgg acgaacaacc ggatggcacc tgcctgatct
     1021 acatcgatcg ccatctggtg catgaggtca cctcgccgca ggcctttgaa ggtctgcggg
     1081 cagccggccg caaggtgcat gccccggaca agactctcgc cgttgtcgac cacaacgtcc
     1141 cgacgaccga ccgcaccaag cccaatcccg atcaggaaag cgccgagcag atcgcagccc
     1201 tggcgaaaaa tgccaaggac ttcgggatcg aatacttcaa cgaattcgac aagcgtcagg
     1261 gcattgttca catcatcggg ccggagcagg gctttacgtt acccggcacg acgattgtgt
     1321 gcggcgacag ccacacggcg acgcatggcg ccttcggcgc gctcgcctac ggcatcggca
     1381 catcggaagt cgagcacgtg ctggcgacgc agacactgat tcagaagaag tcaaagaaca
     1441 tgcgcgccgt cgtcgatggc aaattgcccg tgggcgtgac ggcaaaggac atcatcctgg
     1501 cgatcatcgg cgagatcggt actgccggcg gcacaggtta cgcactggaa tatgcaggcg
     1561 aggcgatccg gtcgatctcg atcgaaggac gcatgaccat ctgcaacatg tcggtggaag
     1621 ggggtgccaa ggccggcttc atcgcgcccg acgagaaagc attcacctat ctcaaggaca
     1681 agccgaaggc tcccaagggc aaggcctggg atgaggccat gcgctattgg gaaacattgc
     1741 gttccgacga tggcgcgcat ttcgaccgcg agatacggct cgacgcggcc aagctgccgc
     1801 cactggtcac ctggggcacc agcccggagc aggtgacctc gatcaccggc aaggtgcctg
     1861 taccgtccga aattcaggac gaaaagaagc gcgccgctgc cgaacgctcg ctcgactaca
     1921 tgggcctcaa gggcggcgaa aaaatcaccg acatcaggct tgaccgcgta ttcatcggct
     1981 catgcaccaa ttcgcgcatc gaggacctgc gcgaagtcgc gcgcatcgtc gatggcaaac
     2041 gggtcaatgc taacgtcaac gcgatgatcg tacccgggtc aggcctggtg aaaatgcagg
     2101 cggaaacgga aggtctcgac aagattttca aagcttccgg attcgagtgg cgcgagccgg
     2161 gttgctcgat gtgcct
//
LOCUS       DATDHO010000071         5921 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_101966, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000071 DATDHO010000000
VERSION     DATDHO010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5921
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_101966"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..120)
                     /locus_tag="VIY07_01270"
     CDS             complement(<1..120)
                     /locus_tag="VIY07_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HEY6380415.1"
                     /translation="MANKRTILIVDDDAELREALVEQLALHEEFEAIAVESGTK"
     gene            236..766
                     /locus_tag="VIY07_01275"
     CDS             236..766
                     /locus_tag="VIY07_01275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY6380416.1"
                     /translation="MPKRSLSRITVRRKPGDSSRGWLIAGMLALPVALGRGGIKANKR
                     EGDGGTPRGNFRLRQLWWRADKHPRPTTSLPVQRISPDDGWCEDPDDRRYNRPIKVPA
                     DANADRLARKDNLYDFIIEIDHNTRPRVARRGSAVFIHAARQGFAPTAGCVALEINTL
                     RRILARLGPRTRIVVE"
     gene            complement(783..1454)
                     /locus_tag="VIY07_01280"
     CDS             complement(783..1454)
                     /locus_tag="VIY07_01280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEY6380417.1"
                     /translation="MAAAPSANLAQVRTEIVRACRDAGRDPADVTLIAVSKTFAPDAI
                     ESVIGAGQQVFGENRVQEAKAKWPSLLSKHDGIQLHLIGPLQSNKAKDAVALFDAIHS
                     VDRASLCEVLGKEIGKQKRQPVLFAEINTGAEPQKAGVLPQDADGFLAACRDQFGLRI
                     SGLMCIPPLDEAPGPHFALTAKIAKRNGLKLLSMGMSADFPSAIALGATHIRVGSAIF
                     GERAK"
     gene            complement(1486..2169)
                     /locus_tag="VIY07_01285"
     CDS             complement(1486..2169)
                     /locus_tag="VIY07_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019172324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY6380418.1"
                     /translation="MREFSAEELEFVKSFKVDELRVEAGASFLREGTRSEYLYSVLSG
                     WAFRYKMLDDGRRQILNYALPADMLGLQGALMNEMEHSVEALTPLVLCVFPRGKLWDL
                     YSRLPSLAFDITWLAAREEQLIDEHLVSLGRRTALERAAYLLLHLFVRAEEAGLVKDR
                     SIQFPFTQQHLADTLGMSLVHTNKTLKRLFLTKTVHWKDRVFEIIDRAALANIAGSDV
                     TPHRPRPFI"
     gene            2405..2794
                     /locus_tag="VIY07_01290"
     CDS             2405..2794
                     /locus_tag="VIY07_01290"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6380419.1"
                     /translation="MPESGTLLLGKRCLVLDDEFLIALDIQQTLELAGAEYVAAAASV
                     PEALALLRGEPDFNLAVLDIKLSGPDVNSLGLAALLAAKGTPFIFLTGMRADDVHARQ
                     FPHAPVIEKPYDRTTLLDAVRRVLGIT"
     gene            2893..5529
                     /gene="leuS"
                     /locus_tag="VIY07_01295"
     CDS             2893..5529
                     /gene="leuS"
                     /locus_tag="VIY07_01295"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEY6380420.1"
                     /translation="MTADTNKNERYNAREAEARWQKVWADRSIFATRNEDPRPKYYVL
                     EMFPYPSGRIHMGHVRNYTMGDVVARYKRAMGNAVLHPMGWDAFGMPAENAAIDRKVH
                     PKTWTYDNIEAMKKQLQSMGLSLDWAREIATCDPAYYKHQQKMFLDFLNAGLVERKQS
                     KVNWDPVDQTVLANEQVIDGRGWRSGAIVEQRELTQWFFKITDYAEDLLKALDTLERW
                     PDKVRLMQKNWIGRSEGLLLRFALDPTTTPNKETELEIFTTRPDTLFGANFMALSPDH
                     PLAQAAAAKNPKLAAFIEQCHRMGTAQAEIDTAEKLGFDTGIKAIHPFDPDWKLPIYV
                     ANFILMDYGTGAIFGCPAHDQRDLDFVNKYGLGNTPVVCPPGQDPKTFVITDLAYDGD
                     GLMINSRFLDGMTIEEAKEEVARRLEKEMRGNRPVAQRQVNYRLRDWGISRQRYWGCP
                     IPIIHCERCGAVPVPEKDLPVTLPDDVSFDKPGNPLDRHPTWKNVKCPKCSSPARRET
                     DTMDTFVDSSWYFARFTDPWIDTAPTNPKVANEWLPVDQYIGGIEHAILHLLYSRFFT
                     RAMRKTGHIDIDEPFAGLFTQGMVVHETYRAKNGEWIEPANVKIEGTAEDRRAVLAST
                     GEPLEIGSIEKMSKSKKNTVDPDDIIGAYGADTARWFMLSDSPPDRDVIWTEEGVQGA
                     WRFVQRLWRLVGDIAAIETPATRPTSFGDQAMTVRKAAHRALAHVSEDIDKLRFNRCV
                     AHIYELANALGDAIGKIEEPPGSDLCWALREAGSILVRLFHPMMPHLAEECWARLGYK
                     TLVATENWPQVEADLLLESNITLPVQINGRKRADVTVARDAEKSDIEAAVLALDAVKK
                     VLDGKSPKKVIVVPQRIVNVVI"
     gene            5516..>5921
                     /locus_tag="VIY07_01300"
     CDS             5516..>5921
                     /locus_tag="VIY07_01300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380421.1"
                     /translation="MSSSDTKRVARFVGALALAGLTAGCFQPLYGERPTPAGGVNVAS
                     QLSAVDVAPIDAPGGSRLSRVSVGVRNELVYDLTGGGGGYSPTHRLDVKLTAQQLQVI
                     VDINTARPDINNYAIDSTYTLTELATGRVVVRG"
BASE COUNT         1330 a         1744 c         1678 g         1169 t
ORIGIN      
        1 cttggtccca ctttcgacag cgatagcctc gaactcttcg tgcagcgcca actgctcgac
       61 caatgcctcg cgaagctcgg cgtcgtcatc gacaatcaga attgttcgct tattggccat
      121 cgtcccaagg ccctttcaag cacgcaaacg cagcgcttgt cgcagtcgcg gaatagaaca
      181 ttcagcgcta gaagagcaag caggaactgc catttaggcc aaacggtcta tcacaatgcc
      241 caaacggtcc ttgtcccgca tcacagtacg ccgcaagccg ggcgattcaa gccgcggttg
      301 gctcatagca ggaatgctgg cgttgccagt ggcactcggg cgtggcggca tcaaggccaa
      361 caagcgggaa ggcgacggcg ggacgccacg cggcaatttt cggctaaggc agctttggtg
      421 gcgtgcagac aagcatccgc gcccgaccac gtcgttgccg gtgcaacgaa taagccccga
      481 tgacggctgg tgcgaagatc cggacgaccg gcggtacaat cgaccgatca aagtgccagc
      541 agacgccaat gcggatcggc tggcgcgcaa ggacaatctc tacgatttca tcatagagat
      601 cgatcacaat acgcgtccac gtgttgccag acgcgggagc gcggtattta ttcatgcggc
      661 gaggcaagga tttgctccga ccgcgggttg cgtcgcgctg gaaatcaata cgctgcgcag
      721 aattcttgct cgactgggcc cgcgcacgag aattgtcgtc gagtagacct tcccggtcgc
      781 tgttacttgg cccgttcacc aaatatcgca ctacccacac gaatatgggt cgcgccaagc
      841 gcaatcgctg agggaaagtc ggcgctcatg cccatcgaca acaatttcag accattgcgt
      901 tttgcgatct tggcagtgag cgcgaaatgg ggtccgggag cttcgtcaag gggaggaatg
      961 cacatgaggc cggaaattct cagtccgaat tgatcgcgac acgccgcgag aaagccgtca
     1021 gcgtcttgcg gcagcacgcc ggctttttgc ggctctgcgc cggtgttgat ctcagcaaaa
     1081 aggaccggtt gacgtttttg cttgccgatt tccttcccta gcacctcgca caagctggct
     1141 cgatcgacgg aatggatcgc atcaaataga gcgaccgcgt cttttgcctt gttggactga
     1201 agggggccga tcagatgcaa ttgaatgccg tcatgcttcg agagcaggga gggccacttc
     1261 gcttttgcct cttgaacccg attttctccg aagacctgct ggcctgcacc aatcaccgac
     1321 tcgattgcat caggcgcgaa ggtcttcgac accgcaatca gtgtcacgtc cgcgggatcg
     1381 cggccggcat cgcggcatgc tctgacgatt tcggtgcgaa cctgagccag attcgcggaa
     1441 ggggcggcag ccatgcgctg cctataacgc accattcact cgacttcaaa taaagggccg
     1501 gggtcgatga ggagtaacat cgctgccggc gatgttggca agcgcggcgc ggtcgattat
     1561 ttcaaacaca cgatctttcc aatgaacggt cttggtgagg aacagacgct tgagcgtctt
     1621 gtttgtgtgc accagtgaca tgccaagcgt atcggcgaga tgttgctggg tgaatggaaa
     1681 ctggatgctt ctgtctttta ccagaccggc ctcctccgcc cgcacaaaca ggtgcaaaag
     1741 caaataggct gcgcgctcaa gcgcggtgcg gcgaccaaga cttacaagat gttcatcgat
     1801 aagttgctcc tcgcgtgccg caagccacgt tatgtcaaac gccagcgagg gaagacgact
     1861 gtaaaggtcc catagtttgc cgcgcgggaa cacgcagaga accagtggcg tgagcgcctc
     1921 aaccgagtgc tccatctcgt tcatgagcgc accttgcaaa cccaacatat cggcaggcaa
     1981 agcgtagtta aggatttgcc tgcgcccatc gtcgagcatc ttgtagcgaa aggcccagcc
     2041 gctcaggacc gaatagagat attcgctgcg cgtgccttcg cgcagaaaac tcgctccggc
     2101 ctcaacccga agttcgtcca ccttgaatga ttttacgaat tcaagctctt cagccgagaa
     2161 ctcacgcaac gatggccgct tgcgcagcgg acactgatcg caaggagtga aagatccatt
     2221 cggccgtcct gctccgataa tcatgggaag ccatagtcag ctcagacgaa tcgccggcat
     2281 ccgaagctag tcaacgctgc tgatacctgt ccaaacatga attttcgcgg cctatgtctt
     2341 ttttaaatgc tgcactcgac aattcgtagg agaaaggaaa gttccatctc cggagacacc
     2401 agccttgcca gaatcgggta ctttgcttct cggcaagcgc tgtcttgtgc tggacgatga
     2461 attcctgatc gccctggaca ttcaacaaac actcgaactg gctggagcag aatacgtagc
     2521 tgccgccgcc agcgtgcctg aagcactcgc gttgctccgc ggcgagccgg atttcaacct
     2581 ggcggtgctc gacataaaat taagcggtcc ggacgtgaac agtctcgggc ttgccgccct
     2641 gctcgcggcc aaaggcacgc cattcatttt cttgaccgga atgcgagccg acgatgtgca
     2701 cgccagacag tttccccacg ctcccgttat cgaaaaaccc tacgaccgaa cgacgctttt
     2761 agacgcggta cgtcgcgtgc tcggaattac ttagttatcc tgcggtagtg cagcgcgttt
     2821 tcagaatgtt cccggccggt tgaccgttcg accggtttcg tgtcagttcc gcgcgcccct
     2881 gcaagacgca caatgaccgc cgatacgaac aaaaacgagc gttacaacgc ccgcgaggcc
     2941 gaggcccgct ggcagaaagt ctgggccgat cgcagcatct tcgcgacccg aaacgaggac
     3001 ccgcggccaa aatattacgt gctcgagatg ttcccttatc cgtcggggcg catccatatg
     3061 ggccatgtac gcaactacac gatgggcgat gtggtcgctc gctacaagcg cgcgatgggc
     3121 aatgccgtgc tgcatccaat gggctgggat gcctttggca tgccagccga gaacgccgcg
     3181 atcgatcgca aggtccatcc gaagacgtgg acctacgaca acatcgaggc aatgaaaaaa
     3241 cagcttcagt cgatgggact ctccctcgat tgggcccgtg agatcgctac ctgcgacccc
     3301 gcatattaca agcaccaaca gaagatgttt ctcgactttc tcaatgcggg actggtcgag
     3361 cgcaaacagt caaaggtgaa ctgggatccc gtcgatcaaa ccgttcttgc caatgagcag
     3421 gtcatcgatg gccgcggctg gcggtccggg gcgatcgtcg agcagcggga actgacgcag
     3481 tggttcttca agatcaccga ctacgcggaa gatctattga aggcactcga tacgctcgag
     3541 cggtggccgg acaaggtccg gcttatgcag aagaactgga tcgggcgctc ggaaggactg
     3601 ctgctgcgct ttgctcttga tccgacgacc actccgaaca aggaaaccga gttggagatt
     3661 ttcaccactc gtcccgacac cttgttcggc gccaatttca tggccttatc gcccgatcat
     3721 ccattggcac aagcagccgc ggcaaagaat ccaaaactgg cggcgttcat cgaacaatgt
     3781 caccgcatgg gcacggcgca ggccgaaata gatactgccg aaaagctggg cttcgatacc
     3841 ggcatcaagg ccatacaccc ttttgatccc gattggaaac ttccgatcta tgtcgccaat
     3901 ttcattttga tggactacgg caccggggcg atcttcggct gccccgctca cgaccagcgt
     3961 gacctcgact tcgtcaacaa atatggcctc ggcaacacgc cggtggtttg cccgcccggc
     4021 caggacccca agaccttcgt catcactgac ctggcctatg acggcgacgg ccttatgatc
     4081 aattcccgtt tcctcgatgg aatgactatc gaggaggcca aggaagaagt cgccaggcgg
     4141 ctggagaagg agatgcgggg caacagacct gtcgcgcagc gacaggtcaa ctaccggcta
     4201 cgcgattggg gaatctcgcg gcagcgttat tggggctgcc ccatcccgat catccattgc
     4261 gagcgctgcg gcgccgtgcc ggttcccgaa aaagatcttc ccgtgactct tccggacgac
     4321 gtgagcttcg acaaaccggg aaacccgctt gaccgccacc cgacctggaa gaacgtcaaa
     4381 tgtccgaaat gctccagccc cgctcgccgc gaaacagaca cgatggacac gttcgtcgat
     4441 tcgtcctggt atttcgcgcg atttaccgat ccttggatcg atacggcacc taccaatccc
     4501 aaggtcgcaa acgaatggct gccagtcgat caatacatcg gcggcattga gcacgcgatc
     4561 ttgcatctcc tctattcacg tttcttcacg cgcgccatgc ggaagaccgg gcacatcgat
     4621 atcgacgagc cattcgccgg gctttttacc caaggcatgg tggtgcacga aacttaccga
     4681 gccaaaaacg gcgagtggat cgaaccagcc aacgtaaaga tcgaaggcac cgccgaagac
     4741 cgcagagcgg tgctggcctc gacgggcgaa ccgctcgaga tcggctcgat cgagaaaatg
     4801 tcaaaatcga agaagaacac ggtggatccc gatgacatca tcggtgccta cggcgcggac
     4861 actgcgcgct ggttcatgct ttccgattcg ccgcccgacc gcgacgtaat ctggaccgag
     4921 gaaggcgtgc agggcgcctg gcgatttgtg caacgccttt ggcgtcttgt tggtgacatt
     4981 gccgcgattg aaacaccggc gacccggccg acgagcttcg gcgaccaggc catgacggtg
     5041 cgcaaggcag cccaccgcgc gctggcgcat gtttccgaag atatcgataa actgcgcttc
     5101 aaccgctgcg ttgcccacat ctacgaactt gcgaacgccc tcggcgatgc catcggcaaa
     5161 atcgaagagc ctcccgggag cgatctttgc tgggcgctgc gtgaagccgg tagcatcctc
     5221 gtacggctgt ttcacccgat gatgcctcac cttgcggaag agtgctgggc gaggctggga
     5281 tataagacct tggtcgccac cgagaattgg ccgcaggtcg aggctgatct gttgctggaa
     5341 agcaatatta ccttgcccgt ccaaatcaac ggcaggaaac gcgccgatgt gaccgtggcc
     5401 cgggacgcgg aaaaatctga catagaggct gccgttcttg cccttgatgc ggtaaaaaag
     5461 gtgctggacg gtaaaagccc gaaaaaggtc attgtcgtcc cgcaaaggat tgtgaatgtc
     5521 gtcatctgac acgaagcggg tggccagatt tgtcggcgcc ttggcgcttg ccggtctgac
     5581 cgccggctgt tttcagccgc tttacggcga acggcctacg ccagcgggcg gcgtcaacgt
     5641 ggccagtcaa ctcagcgccg tcgacgtcgc gccgatcgat gcgccgggcg gctcccggct
     5701 ttcgcgcgta agcgtgggcg tacgcaatga actggtttac gatcttacgg gcggcggcgg
     5761 cggatattct ccgacgcacc gcctcgatgt gaaactgact gcacaacagc tccaggtgat
     5821 tgtcgatatc aataccgctc gccccgatat caacaattac gcaatcgaca gcacctacac
     5881 actgaccgag cttgcgacag gaagagttgt tgtgagaggc c
//
LOCUS       DATDHO010000072         2764 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_3061, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000072 DATDHO010000000
VERSION     DATDHO010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2764)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2764)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2764
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3061"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1250)
                     /gene="coaBC"
                     /locus_tag="VIY07_01305"
     CDS             complement(<1..1250)
                     /gene="coaBC"
                     /locus_tag="VIY07_01305"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEY6380422.1"
                     /translation="MASLTVRQLDERLKKLLRLRAAKSGRSVEDEVRTILREAAETTG
                     REALDLIEPPSPSEKRKVARAAPPDGNKRVLLIIGGGIAAYKSLDLIRRLKERDIAVR
                     CILTKAAEQFVTPLSASALVGERVFADLFDPASEFDVGHIRLARETDLIVVAPATADL
                     MAKLAGGHADDLATAVLLATTAKILLAPAMNPGMWANKATQRNLNQLVADGVGLVGPN
                     EGEMAEAGERGIGRMAEPLEIANAAEKLLVAKGPPVLESRRVLITSGPTHEPIDPVRY
                     IANRSSGKQGHAVAAAAAAAGADVTLVTGPVSVADPPGVTVIKVETARQMLQAVERAL
                     PADIAIFAAAVADWGVANAGEQKLKKQAGKTVPQLALVENPDILATIAKRKIQRPTLV
                     IGFAAETENVAANAKAKLASKGCD"
     gene            1394..1762
                     /locus_tag="VIY07_01310"
     CDS             1394..1762
                     /locus_tag="VIY07_01310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEY6380423.1"
                     /translation="MTTDRLSNTFAALADPTRRAILARLALGETSVLKLAEPFDMSLP
                     AVSKHLKVLERAGLITRGRDAQMRPCRIDVHALREADQWLEEYRRLWEQRLDRLDDYL
                     KVLQAKPKQTKRVKNHDRKK"
     gene            1746..2246
                     /locus_tag="VIY07_01315"
     CDS             1746..2246
                     /locus_tag="VIY07_01315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018063685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY6380424.1"
                     /translation="MTAKNSIDLERDPRSIIGSRVLDAPRALVFSVWTDPKHLAQWWG
                     PNGFTTTTHAYDFRPGGVWRFVMHGPDGRDYQNRITFDEIVPPERIAYRHGGGDDVEP
                     VLFTQTVTFEDLGNGKTLLTWHARFPSAAERARVIKEYGADKGLAQTMARLADYLVTM
                     PTEKSA"
     gene            complement(2259..2705)
                     /locus_tag="VIY07_01320"
     CDS             complement(2259..2705)
                     /locus_tag="VIY07_01320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY6380425.1"
                     /translation="MSTRQQLPLSATHLVRDNCLCLHVQRAARGLARRFDDVFRPLEL
                     THGQFSLLMSLNRPEPPTIGSVAALLAMDRTTLTAVLKPLERRRLVKVSIDKEDKRSR
                     RLTITASGRSLLAKAFPLWRETHAAIEQSLAAFHPDDLRAAMLALS"
BASE COUNT          549 a          829 c          830 g          556 t
ORIGIN      
        1 caatcacagc ctttgctggc gagcttcgcc ttcgcattgg cagccacatt ttcggtttcg
       61 gcggcaaagc cgatcaccaa tgttggccgc tgtattttcc gcttggcaat agttgcaaga
      121 atgtctggat tttcgaccag cgcaagctgc ggaacggttt ttcccgcctg cttttttaat
      181 ttctgttcgc cggcattggc gacgccccag tcggcaacgg cggcggcaaa gatcgcaata
      241 tccgcaggca gcgcgcgctc gaccgcttgc agcatttggc gtgccgtctc gaccttgatc
      301 accgtcacgc ccggcgggtc agcaacactg acagggcccg tcaccagcgt gacatcggcg
      361 ccggcggcag cagcagcggc agcgaccgca tggccttgct ttcccgacga gcgattggcg
      421 atgtagcgaa ccgggtcaat cggttcatgc gtcggccccg aagtgatcaa cacgcgccga
      481 ctttccagca ccgggggacc tttggcgaca aggagttttt ctgcggcgtt ggcgatttcc
      541 aatggctccg ccatgcggcc aatcccgcgt tcgccggctt cagccatctc gccttcgttc
      601 gggccgacga gaccaacacc atcggcaaca agctggttca gattgcgttg ggtggccttg
      661 tttgcccaca tgccggggtt catcgccggc gcgagaagta tctttgcagt tgttgcgagc
      721 aaaaccgcgg tggcgagatc gtcagcgtgt ccgcccgcaa gttttgccat caggtcggca
      781 gtcgccggcg caaccacgat taagtcggtc tcgcgtgcga gccggatatg tccgacgtca
      841 aattcgctcg cgggatcgaa caggtcggca aagacgcgct cgccgacgag tgcgcttgcc
      901 gacaacgggg tcacgaattg ctctgctgct ttggtcagga tgcaacgcac ggcgatgtcg
      961 cgctctttga gccgccggat cagatccagc gatttatagg ccgcgatgcc gccaccgatg
     1021 atgagcagca cgcgtttgtt gccatctggc ggtgcggcgc gggcaacttt tcttttctcg
     1081 gaaggagagg gcggctcaat caagtcgagc gcttcacgtc ccgttgtctc ggcggcctcg
     1141 cgcaaaatgg tgcgcacctc gtcctcgacc gaacgtccgc tcttcgcagc acgcaggcgc
     1201 agcagctttt tcaggcgttc atcgagctgt cggacggtta gggaggccat agaattctca
     1261 tgtgtgacaa gactatatca ccaaatgatc gcactgcaat cattgcaatc aacccgctag
     1321 gccttcttga cgaggcccgt ccattcatgt acttaaccgg atagttaatt aactaactgg
     1381 tttaattcca accatgacga ccgatcgtct cagcaacacc ttcgcggccc ttgccgaccc
     1441 cacacggcgg gcgatcctcg cgcggctcgc gcttggtgag acgtccgtgc tgaagctcgc
     1501 cgaacctttc gacatgagtc tgcctgcggt ttccaagcac ctgaaggtcc tcgagcgcgc
     1561 gggactcatc acgcgcggcc gcgatgcgca gatgcgcccc tgccgaatcg atgtgcacgc
     1621 tctcagggaa gccgaccaat ggctcgagga gtatcgccgg ctctgggaac agcggctcga
     1681 tcggctcgac gactacctga aagtgctgca agcgaaaccg aagcaaacga agcgggtgaa
     1741 aaaccatgac cgcaaaaaat agtatcgacc tcgagcgcga tccacgttcg atcatcggct
     1801 cgcgcgtgct cgacgcgccg cgcgcattgg tgttctcggt atggaccgat ccgaagcatc
     1861 tcgcgcaatg gtgggggccg aacggcttta ccactacgac gcatgcgtat gattttcgtc
     1921 ctggcggcgt gtggcgcttt gtcatgcacg ggcccgacgg tcgcgactat cagaaccgca
     1981 ttaccttcga tgagattgtt ccgccggaac gcatcgccta tcgccacggc ggcggtgatg
     2041 acgtcgaacc cgtgctgttc acgcagaccg tgacgttcga ggatctcggc aacggtaaga
     2101 ccctgctgac ctggcatgcc aggttcccat ccgccgcaga gcgtgcgcgg gtcatcaaag
     2161 aatacggcgc cgacaagggt ctcgcgcaga caatggcgcg gctcgccgat tatctggtca
     2221 cgatgccgac agaaaagagt gcgtagatgc tccgcagttt acgacagcgc gagcatcgca
     2281 gcgcgcagat catccggatg gaaagcagcc agcgactgtt cgatcgcggc gtgggtttct
     2341 cgccacagcg gaaacgcctt ggcgagaagc gatcgtccgc ttgccgtgat tgtgagacga
     2401 cggctgcgct tatcctcctt atcgatcgaa accttcacca gcctgcggcg ttcaaggggt
     2461 ttgaggaccg cggtcagcgt ggtgcggtcc atggcaagca gcgccgcgac gctgccgatt
     2521 gtggggggtt ctggtcggtt caacgacatc agcagggaaa attggccgtg ggtgagttca
     2581 agcggacgga acacatcgtc aaaacgccgc gccagccctc gcgcggcgcg ctgcacatgc
     2641 agacacaggc agttgtcgcg caccagatgc gtggcggaca gtggtaattg ctggcgggtt
     2701 gacatggccg ataataggtt gatatcaacc taattgtcaa tgacactaag ctgaaaggaa
     2761 aaga
//
LOCUS       DATDHO010000073         5424 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_300270, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000073 DATDHO010000000
VERSION     DATDHO010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5424)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5424)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5424
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300270"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="VIY07_01325"
     CDS             <1..730
                     /locus_tag="VIY07_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEY6380426.1"
                     /translation="LQRGFKVYKEVCASCHSIQMLAFRNLAEPGGPGFSEAQAAAVAS
                     EYKIKDLDEKGEPTERPARPADNFPPPFPNELAAKAANGGVAPPDMSTLAKARTFERG
                     FPWFVFDTITQYQEQGPDYITALLKGYEEPPKGFQLPPGGHYNKYFPGHNIAMPPPLQ
                     DGQVTFDDGAPQTVDQYSKDVSAFLMWAAEPHMLARKRIGLQVMIFLIVFAGLMYFTK
                     KKVWHEVEKPTEIARGQDPKKTTV"
     gene            853..1728
                     /locus_tag="VIY07_01330"
     CDS             853..1728
                     /locus_tag="VIY07_01330"
                     /EC_number="2.4.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017061 - S-methyl-5-thioadenosine
                     phosphorylase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5'-thioadenosine phosphorylase"
                     /protein_id="HEY6380427.1"
                     /translation="MTKSILGVIGGSGIYELPGLTNVREQRIVSPWGEPSGPLRTGDI
                     AGLPVVFLSRHDQGHRLSPSDINYRANIDVLKRAGVTDLVSLSACGSFKEELPPGSFV
                     LIDQFVDRTHKRESSFFGQGLVAHVSMAHPVSPLLRAHLRAAALAEGIQPRWGGTYVC
                     IEGPQFSTYAESMTYKQLGYSVIGMTNMPEAKLAREAEICYATVAMVTDFDCWHPDHD
                     AVTVQDIIKVLLANAEKAKGLVARLARDFPREHEPCPIGSDRALDTALITAPEARAPD
                     LIKKLDAVAGRVLGG"
     gene            1818..2252
                     /locus_tag="VIY07_01335"
     CDS             1818..2252
                     /locus_tag="VIY07_01335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008552838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6380428.1"
                     /translation="MLNEPTFNKHREEPMHIVDVNQQPSEEWRAGVTTRMRASAANNA
                     TQLCLFEQWCDPGHGAPTHLHAVEEILCVREGQADVWIDDRHVTLTSGQLVIVPAGRK
                     HGFSNSGDAVLHIESTLAAPVFEAAYDDKRETPRRWLPGAMK"
     gene            2433..2981
                     /locus_tag="VIY07_01340"
     CDS             2433..2981
                     /locus_tag="VIY07_01340"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEY6380429.1"
                     /translation="MTSPELEKDLRAAIRNIPDYPKPGIIFRDITTLLGDARAFRRAV
                     DELVQPWAGMKIDKVAGIEARGFILGGAVAHQVSAGFIPIRKKGKLPYKRVTIGYSLE
                     YGIDEMEMHEDAVQKGERVILVDDLIATGGTAEAAVKLLRKLGANVLAACFVIDLPEL
                     GGADKLRKLQVPVRTLISFEGR"
     gene            complement(3064..4221)
                     /locus_tag="VIY07_01345"
     CDS             complement(3064..4221)
                     /locus_tag="VIY07_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEY6380430.1"
                     /translation="MAAYGLYSHIQSNRRRSVALLIGLFFLVYVMVFAGALLAEALTV
                     NAPLDYLVQAALYDLITAFPFATAGAIVWMLIAYKFHQSMIDSITGGREVTRAEEPRL
                     YNLLENLCISRGITMPKLKIADDEALNTFATGLNEKQYSITVTRGLMNALDDAELEAV
                     LGHELTHIRNGDVRMLVIAVVIAGVISFFGEMVFRLFFQNAYYRGFRRGGGDGDRRGG
                     AGLAIIIAFLLIAVAWALSIVIRFALSRKREYLADAGSVELTKNPDAMISALRKIEGR
                     GELAAANSAVMEMCVDNPREGFADLFATHPSVDSRVEALIKFAGGHDPGPLVLAPPQE
                     QEPGQLPSPASGGPWGSGEQNKAEAKPFLPDQPPVDLGDGGPWGPRRSGPV"
     gene            complement(4338..4901)
                     /locus_tag="VIY07_01350"
     CDS             complement(4338..4901)
                     /locus_tag="VIY07_01350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEY6380431.1"
                     /translation="MSTTGWVVLGIIVVLVIWAISIYNSLVAMRQRTNQAFADIDVQL
                     KQRHDLIPNLVETVKGYAAHERGTLEAVVQARNAAIAAPGVEQKVAAENALTGALRQL
                     FALSEAYPDLKANQNFQQLQAELSDIENKLAASRRFFNNAVQEYNTGIQQFPASLFAT
                     MFGFLPRTFFDLGEGRAQLEQAPSVKF"
BASE COUNT         1113 a         1619 c         1663 g         1029 t
ORIGIN      
        1 gctccagcgt gggttcaagg tctacaagga agtgtgcgca tcctgccatt cgatccagat
       61 gctggctttc cgcaatctgg ccgagccggg cgggccgggc ttttcggaag cgcaggcagc
      121 tgccgttgcg tcggaataca agatcaagga cctcgacgag aagggcgagc cgaccgaacg
      181 gcccgccagg ccggccgaca atttcccgcc gccttttccg aacgaactgg ccgcgaaagc
      241 ggcaaacggc ggtgtcgcac cgcccgacat gtcgaccctc gccaaggcgc gcacctttga
      301 acgcggcttc ccctggttcg tcttcgatac gatcacgcag tatcaggagc agggtcccga
      361 ttacatcacg gcccttctga agggctacga ggagccgcca aagggctttc agttgccgcc
      421 gggcggccac tacaacaaat attttcccgg tcacaacatc gcgatgccgc ctccactgca
      481 ggacggtcag gtgaccttcg acgatggcgc gccgcagacg gtcgatcagt attcgaagga
      541 tgtttcggcc ttcctgatgt gggcggccga accgcacatg ctcgcacgca agcgcatcgg
      601 cctgcaggtc atgatcttcc tgatcgtttt cgctggcctg atgtacttca ccaaaaagaa
      661 ggtctggcac gaagtcgaaa agccgaccga gatcgctcgc ggccaggatc cgaaaaagac
      721 gacggtctaa atttgtaaga atggcttctg aaagcgtcat gcccggcctt gtgccgggca
      781 tcccgtttag gaaggcattg tgccattctt gtcgagatgg ccgggacaag cccggccatg
      841 acggggtggg gaatgaccaa atccattctc ggcgtcatcg gcgggtccgg catctatgaa
      901 ttgcccgggc tgacgaatgt gcgcgaacag cgcattgtca gcccctgggg cgagccgtcc
      961 ggacctttgc gtaccggaga catcgcgggc ttgccggtcg tatttctctc gcgccacgac
     1021 cagggccatc gcctgtcgcc gtccgacatt aactatcggg ccaacatcga cgtgctcaag
     1081 cgggccggtg tgaccgatct cgtgtcgttg tccgcctgcg gctcgttcaa ggaagaattg
     1141 cctccgggca gttttgtgtt gatcgaccag tttgtcgacc gcacccacaa gcgggaaagc
     1201 tcgttcttcg gccagggact ggtagcgcac gtgtcgatgg cgcatccggt gtccccgttg
     1261 ttgcgcgcac atctgcgtgc cgccgctcta gcggaaggca tccaaccgcg ctggggcggc
     1321 acttacgtgt gcatcgaagg tccgcaattt tccacctacg cggagagcat gacctacaaa
     1381 cagctgggct attcagtcat tggcatgacc aacatgccgg aggcaaagct cgcgcgcgaa
     1441 gccgagattt gttacgcgac tgtcgcgatg gtgacggatt tcgactgctg gcaccccgat
     1501 cacgacgccg tcaccgtgca agacattatc aaggtgctgc tggccaatgc ggaaaaggcc
     1561 aaagggcttg ttgcgcgtct ggcgcgcgat tttccacgcg agcacgagcc gtgcccgatc
     1621 gggtcggatc gcgcgctcga cacagcactt attacagcgc ccgaagctcg tgcccccgac
     1681 ctgattaaga aactcgatgc cgttgccggc cgggtgctcg gcggctagcc tcgccactat
     1741 gaatattcag gcaggcattg ttacccgcga caaactgccc ttcgatcgcc tcgggcttgg
     1801 cgcaaggcga acaagtgatg ctgaacgagc ctaccttcaa caaacaccgt gaggagccga
     1861 tgcatatcgt cgatgtgaat cagcagccaa gcgaggaatg gcgggcgggc gttacgacgc
     1921 gcatgagagc ctccgcggca aataatgcga cgcagctttg cctgttcgag caatggtgcg
     1981 atccgggaca tggcgcgccg acgcacctgc atgcggttga ggaaatacta tgcgtgcgcg
     2041 aaggacaggc tgacgtctgg atcgacgatc ggcacgtcac gttgaccagc ggacaactcg
     2101 tcatcgtgcc ggccggccgc aagcatggtt tctcaaacag cggcgatgca gttcttcaca
     2161 tcgagtcgac gcttgcggcg ccggtgttcg aagccgccta tgacgacaag cgagagacgc
     2221 cgcgacgctg gctgccgggg gcgatgaaat gacgcttctc gcgcctgaaa cgcgtcgtgg
     2281 ccgggcttgt cccggccatc cacgtcttta tacctcttaa gtcgtggatg ccccggcaca
     2341 cggcttgtgc tcgggccggc cgaaggccgg acccgagtgc cgggcatgtc ggctgaaagg
     2401 ttttgctatc tctactatgg cacttggctc tcatgacctc tcccgaactt gaaaaagatc
     2461 tgcgcgcggc aatccgcaat atcccggatt atcccaagcc cggcatcatc tttcgcgaca
     2521 taaccacact gctgggcgac gcgcgtgctt tccgtcgcgc ggtggatgaa ctggtgcagc
     2581 cctgggcggg catgaagatc gacaaggtcg ccggcataga ggcgcgcggc ttcattctcg
     2641 ggggcgcggt cgcgcaccag gtctcggccg ggttcatccc gatccggaag aaaggcaaat
     2701 tgccctacaa gcgcgtcacc atcggctatt cgctcgaata cggcatcgac gaaatggaga
     2761 tgcacgaaga cgccgtgcaa aagggcgagc gggttatcct cgttgacgat ctcattgcaa
     2821 cgggcggaac tgcggaggcc gctgtaaagc tgctgcggaa gctgggcgcc aacgtgctcg
     2881 ccgcctgctt tgtcatcgat ctgccggagc tcggcggcgc ggacaagttg cgcaagctgc
     2941 aggtgccggt acgcacgctg atttcattcg aggggcgtta gcgggcgggc tttgtaatcc
     3001 gctcgtcccc ccgaaagcgg ggacccagca ccgccgccta tttctaactc gccggattcc
     3061 tgcttacacg ggacccgaac gtcgcggccc ccacggacca ccgtcgccga ggtcgaccgg
     3121 cggttggtcc ggcaagaacg gcttggcttc ggccttattc tgttcgccgc tcccccacgg
     3181 ccccccggat gcaggcgatg ggagctggcc cggctcctgc tcttggggtg gcgcgagaac
     3241 aagcggaccg ggatcatgac cgcccgcgaa tttgatcagg gcctcgacgc gcgagtcgac
     3301 cgaagggtgg gtggcgaaca aatccgcaaa gccttcgcgc gggttgtcga cgcacatttc
     3361 catcaccgcc gagttcgcag cggcaagttc gccgcggcct tcgatcttgc gtagtgccga
     3421 tatcatagca tcgggatttt tggtgagctc aacggatccc gcgtcggcaa ggtattcacg
     3481 tttgcgcgac aacgcgaagc gaatgacgat cgacagcgcc caggcaacag cgatcagtaa
     3541 aaaagcgata ataattgcaa gcccggcgcc gccccgacga tcgccgtcgc cgccaccgcg
     3601 tcggaatccg cgataataag cgttctggaa aaacagtctg aagaccatct cgccaaagaa
     3661 ggaaatcacg cctgcgatta caaccgcgat cacgagcatg cgtacgtcgc cattgcggat
     3721 atgcgtcagc tcgtgcccca gcacggcttc cagttcggcg tcgtcgagcg cgttcatcag
     3781 cccgcgcgtt accgtgatcg aatactgctt ttcattaagg ccagtggcga aagtgttaag
     3841 cgcttcgtcg tcggcaatct tgagcttcgg catggtgatg ccgcgggaga tgcagagatt
     3901 ttccagcaga ttgtagagcc gaggttcctc cgcgcgcgtc acctcgcggc cgccggtgat
     3961 ggagtcgatc atcgactggt ggaatttgta cgcgatcagc atccagacga tggcccctgc
     4021 cgtcgcgaag ggaaaggccg tgatcagatc gtaaagcgcg gcctgcacca gatagtcgag
     4081 cggggcattg accgtcaggg cctcagccag cagcgctccg gcgaacacca tcacatagac
     4141 caggaagaac aggccgatca gcagcgccac cgaccggcgc ctgttcgact ggatgtgaga
     4201 gtaaagtccg taagcggcca ttatcctgct cggtcgttcg ctcgtcatgc ccggccttgt
     4261 gccgggcatc cacgtcttca gcttggcaaa ggggaagacg tggatggccg gaacaagcca
     4321 gatgtgagtg agcagaccta aaacttcacg ctcggagcct gctcgagctg ggcgcggccc
     4381 tcgccaagat cgaagaaggt gcggggcaag aagccgaaca ttgtggcgaa cagcgacgcg
     4441 ggaaattgct ggatacccgt attgtactcc tgcaccgcgt tgttgaagaa ccgccgcgag
     4501 gctgcgagct tgttttcgat gtcagaaagc tcggcctgga gctgctggaa gttctgattg
     4561 gccttgagat ccggataagc ttccgaaagc gcgaacaatt gccgtaacgc gcccgtgaga
     4621 gcattttcgg ccgcgacctt ctgttcaacg ccgggtgccg caatggctgc gttgcgcgcc
     4681 tgcaccacgg cctccagggt gccgcgctcg tgcgccgcat aacctttgac cgtttcgacc
     4741 agattgggga tgaggtcgtg gcgctgcttg agctgcacgt cgatatcggc aaacgcttga
     4801 ttagtccgct gccgcattgc gacgaggctg ttgtagatgc tgatcgccca aatcacgagg
     4861 acgacaatga tgccgaggac aacccagcca gtggtggaca tgaaacggct ccggattgga
     4921 aagcgcgatt aatggaacca agtctatcct acgtgagcca gcaatcgcca aggccgggat
     4981 ttgtgagtcc ggggcaaaaa agcggcgccg gcgacatcct tcatccagga gcagcactgg
     5041 gaaggcgaga caaaaaaaga ccccgagttt taacccgggg tctattcgct aggcggctat
     5101 tcggggggta aggggggagc cgcccaactg atcactaaac gcggacgaca ggatttcgtt
     5161 ccgggcgcaa atttaaagtt gttcatgagg ggcgctttta aagttgttca tgagcggctc
     5221 tcaagttccg tcgcaatgga aacttgccat tccggaagcg ttaccaatag gttctggcag
     5281 gttgctcacg agttggatgc ggcgccggca atcggcgctg aaacgaacta gctcgcctcg
     5341 cggaacctca ccgcagcttc cagatcaacc gacacaagct gcgatacgcc acgctccgcc
     5401 atggtcacgc cgtagaggcg attc
//
LOCUS       DATDHO010000074         4106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_52373, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000074 DATDHO010000000
VERSION     DATDHO010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4106
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_52373"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..784
                     /locus_tag="VIY07_01355"
     CDS             <1..784
                     /locus_tag="VIY07_01355"
                     /inference="COORDINATES: protein motif:HMM:NF024742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6380432.1"
                     /translation="VMALAPVLAPIAGGFLQTWFGWRAVFFTLVAAGVVGVVIVWAAL
                     PETLKLRATEPLSITSILRSYRLVARNPAYLAYLGITAASYAGLFVWISAAAFVLQDL
                     YRLSPADFGIAFALGSVGYMVGSALAARVVVAFGLDGMLGIGAGTCAAGGIAMVLAVA
                     CGFPSSLALVFPMAVYLAGLGMVLPQGIAGALTPFPERAGAASSLFGFVQQSVAALCG
                     AVVGWLLGESAWPLAIGVAAMGCVTLVLWLTTQGIRRAAPKQ"
     gene            complement(785..2881)
                     /locus_tag="VIY07_01360"
     CDS             complement(785..2881)
                     /locus_tag="VIY07_01360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEY6380433.1"
                     /translation="MASKRGQARARREPAFDKASDLRISAEDRSAQADDKPRAKSGWR
                     RPRRRRGRLGKRALLGRIAYWSLVAGLWLAIGAAGFVAWVGAHLPPIQSLEIPKRAPS
                     IQIVDFQGRALARRGDLAGAPLPLKEMPAYVPKAFIAIEDRRFYDHHGVDPFGIGRAF
                     VANVTHRTVAQGGSTITQQLAKNLFLTQERTINRKLQEVLLALWLERKFSKAQILEMY
                     LNRVYFGAGAYGIEQASQRYFGKSARQITLGEAALLAGLVKSPSRLAPTRNFDGAEKR
                     AKVVLAAMAELSFIGRSAERTALARPPRIVAQPDMGSVHYVADWVMDALNDAIGHVDD
                     DIIVQTTIDAALQASAEKALNDELAQKGDRNGVTQGALIAMSPDGAVRALVGGRNYAE
                     SQFNRAVAAKRQPGSAFKPFVYLAALERGLTPDTVREDRPINVKGWQPENYGHEYFGA
                     VTLTRALAQSLNTVSVRLTLEVTPMAVVRTAYRLGITSKLEPNASIALGTSEVSVLEL
                     VSAYAPFANGGYALVPRVIDKITLTNGRLIYARNIQQLGRLIDARHVSMMNTMMAETL
                     TIGTAQRASLPGWPAAGKTGTSQDFRDAWFIGYTAHLVTGVWLGNDDGTPTKRVTGGS
                     LPVEIWSLVMRGAHQGVPVASLPGAPTGNFFSGLFDGNSRPVPPAPVQPVAASNSTTA
                     SGGLDGWLLNNLFGRR"
     gene            complement(3023..>4106)
                     /locus_tag="VIY07_01365"
     CDS             complement(3023..>4106)
                     /locus_tag="VIY07_01365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEY6380434.1"
                     /translation="TAETETVAWLIENHLVMSSVAQSRDLSDRRTIENFAAIVQSAER
                     LKLLTILTTADIRAVGPGVWNGWKAQLIRTLYYETEPVLTGGFSEVNRAQRVAIAQNE
                     FREAMKDWPPERLEAYIAKLYPAYWLKVDLPHKIEHANFVRAAEDADKRLATSIAFDT
                     ERAVTELTLLAPDHPWLLSIIAGACAMTGANIVDAQIYTTTDGRALDTISLSREFDRD
                     EDEERRANRIADSIEKALRGELRLPDVVAKRMPPKGRIRAFAVEPTVTINNQWSHRYT
                     MVEVTGLDRTGLLYELTATLSKLNLNIASAHVATFGERVVDVFYVTDLMGAQITSPTR
                     QAAIKRALIALFATGEDSKSAKAAAS"
BASE COUNT          670 a         1272 c         1342 g          822 t
ORIGIN      
        1 ggtgatggcg cttgcgccgg tcctggcacc gattgcgggt ggattcctgc agacctggtt
       61 cggctggcga gccgtgtttt tcaccctagt tgccgcaggc gtcgtcgggg tggtaatcgt
      121 gtgggcggcg ttgccggaaa cactaaagtt gcgagccacg gagccattat cgataacttc
      181 gatccttcgt tcctatcgac tcgtggcgcg caaccccgcg tatcttgcct atctcggcat
      241 taccgctgcg agctacgccg gcctgttcgt ctggatttcc gcggccgcat tcgtgctgca
      301 ggatctctac cggctcagcc cggctgattt cggaatcgct ttcgcgctcg gctcggtcgg
      361 ctacatggtc ggctcggccc tggccgcgcg cgtggtcgtg gcatttggac tcgacggcat
      421 gctcggaatt ggcgcgggca cctgcgctgc cggcggcatt gcgatggtgt tggctgtcgc
      481 ctgcggattt ccctcgtcgt tggcgctcgt ctttccaatg gccgtttatc ttgccggtct
      541 cggtatggtg ctgccacagg gcattgccgg cgcgctgacc ccatttccgg aacgcgccgg
      601 cgccgcgtct tcgctgttcg ggttcgtgca gcaaagcgtt gcagctttgt gtggcgcagt
      661 agtgggctgg ctgctcggag agagcgcctg gcccctcgca ataggagttg cggcgatggg
      721 gtgcgtcacg ctggtgctct ggttgacgac gcaaggcata cgccgcgccg cgccgaaaca
      781 gtgatcagcg gcgtccgaag agattgttca gcagccagcc atcgagtccg ccgctggccg
      841 tcgtcgaatt gctggccgcg accggttgga cgggggccgg cggcacgggt ctggagttgc
      901 cgtcgaacag gccggagaag aaattgcccg ttggagcgcc cggcaggctt gcgaccggga
      961 cgccttgatg cgcgccgcgc atgactaggc tccagatctc caccggcagg ctgccgccgg
     1021 tcacacgctt ggttggcgtt ccatcgtcat tgcccagcca aaccccggtg accaggtgcg
     1081 cggtgtagcc gatgaaccag gcgtcgcgga aatcctggct ggttccggtt tttccggctg
     1141 ccggccaacc gggcaggctc gccctttgtg cggtgccgat ggtcagcgtc tcggccatca
     1201 tcgtattcat catgctcaca tggcgcgcat cgatgaggcg gccgagctgc tggatgttgc
     1261 gtgcatagat cagcctgccg ttcgtcaagg tgatcttgtc gatcacgcgg ggcacaagcg
     1321 catagccgcc attggcaaag ggcgcgtacg cgctcaccag ttcgagcact gagacttcag
     1381 aggtacccag cgcgatcgag gcatttggct cgagcttgga agtaatgccg agacggtacg
     1441 ccgtgcggac gaccgccatg ggcgtgacct caagcgtcag ccgcaccgag accgtgttca
     1501 gcgattgcgc aagagcccgt gtcagcgtca ccgcgccgaa atactcgtgt ccgtagttct
     1561 ccggctgcca gcctttgacg ttgatcggcc tgtcctcgcg tacggtgtct ggcgtcagtc
     1621 cgcgctcgag tgcggcgagg tagacgaacg gcttgaacgc agagccaggc tgacgctttg
     1681 cggcgactgc acggttgaat tggctttcgg catagtttcg accaccgacc aacgcgcgca
     1741 ctgcgccatc cgggctcatc gcgatcagcg cgccttgcgt gaccccgttc ctgtcgccct
     1801 tctgcgccag ctcgtcgttg agcgcttttt cggcactcgc ctgcaaagct gcgtcgatcg
     1861 tggtctgcac aataatgtca tcgtcgacgt gaccgatcgc gtcattaagc gcatccatga
     1921 cccaatcggc cacgtagtgg actgaaccca tgtcgggctg cgccacgatc cgcggcgggc
     1981 gggccagcgc cgtgcgttcg gcggagcggc cgatgaaact gagctcggcc atcgctgcga
     2041 gcacgacctt tgcgcgcttc tcggctccgt caaaatttcg cgtcggcgca agacgcgacg
     2101 gcgatttcac gagtcccgcc aggagcgccg cctcgcccag cgtgatctgg cgcgctgatt
     2161 tcccgaagta tctttgcgag gcttgctcga tcccgtaggc accggcgccg aagtacacgc
     2221 gattgagata catctccaga atctgcgcct tggagaactt gcgctcgagc cacagagcca
     2281 gcagcacttc ctgcagcttg cgattgatcg tccgctcctg cgtgaggaaa aggttttttg
     2341 ccagctgctg cgtaatggtc gagccgccct gcgcaacagt gcggtgcgtg acgttggcga
     2401 cgaaagcgcg tccgatgccg aacggatcga cgccgtggtg atcgtagaag cggcgatcct
     2461 cgatggcgat gaaggccttc ggcacatagg ccggcatttc cttcagcggc aatggagcgc
     2521 cggcgagatc tccccggcgc gccagcgcgc gaccctgaaa atccacgatc tggatggaag
     2581 gcgcgcgctt cgggatttcg agcgactgga tcggcggcag gtgcgcgccg acccacgcga
     2641 caaagccggc ggcgccaatg gcaagccaca ggccggcgac caggctccag taggcaatcc
     2701 tgccgaggag ggcgcgcttg ccgagcctgc ctcttctcct gcgcgggcgg cgccaaccag
     2761 atttggctcg tggcttgtcg tccgcctgag cagaacggtc ctcggcggag atgcgcaaat
     2821 cggaagcttt gtcgaacgcc ggctcccggc gtgcgcgcgc ttgtcccctt ttcgacgcca
     2881 taacgcgaac ccatccgcgc cggcacgtgc aaggtgccgg ccccggaccg acgctacgcg
     2941 ggtcgattta aggggccgtt aaggaacgcc atgccctggc tttatgcggg ggtccgcagg
     3001 cggaacaacc cggccatgac ggtcagctgg cggccgcttt tgcggatttg ctgtcctcgc
     3061 cggttgcaaa cagcgcgatc agcgcgcgct tgatcgccgc ctggcgcgtc ggcgaggtaa
     3121 tttgcgcccc catcagatcg gtgacgtaga agacgtccac cacccgctcg ccgaacgtgg
     3181 cgacgtgggc ggaagcaatg ttgagattga gcttcgagag cgtcgcagtc agctcataca
     3241 gaagcccggt gcggtcgagc ccggtgacct cgaccattgt atagcgatgc gaccattgat
     3301 tgttgatggt gaccgtgggt tctaccgcga aagcacgaat gcgacccttc ggcggcatgc
     3361 gtttcgccac gacatcaggc agcctcagtt cgccgcgcag ggccttttcg atcgagtccg
     3421 cgattcgatt ggcgcgcctc tcctcatctt catcgcggtc gaattcgcgc gatagcgaaa
     3481 tggtatcgag cgcgcggcca tcggtggtgg tgtaaatctg ggcatcgaca atgttggctc
     3541 cggtcatggc gcaggcgccg gcgatgatgg agagcagcca cggatggtcg ggtgccagca
     3601 gcgtaagttc ggtgaccgcg cgttccgtat cgaacgcaat tgaggtcgcg agccgcttgt
     3661 ccgcatcctc ggcggcgcgc acgaaattgg cgtgctcgat cttgtgcggc agatcgacct
     3721 taagccagta ggccggataa agcttggcga tataggcctc caggcgctcg ggcggccagt
     3781 ctttcattgc ctcgcggaat tcgttctggg cgatcgccac gcgctgggcg cggttgactt
     3841 ccgagaatcc acccgtgagc acgggttcag tttcgtagta gagcgtgcgg atgagttgcg
     3901 ccttccagcc gttccacacg ccgggaccga cggcgcggat atccgcggta gtcaggattg
     3961 tcagcagctt cagccgctcg gccgactgca cgattgcggc aaaattctcg atcgtcctgc
     4021 ggtcggaaag atcgcgcgac tgcgcgacgc tcgacatgac gaggtgattt tcgatcagcc
     4081 acgcgacagt ttcggtttcg gcggtc
//
LOCUS       DATDHO010000075         3181 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_448419, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000075 DATDHO010000000
VERSION     DATDHO010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3181
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448419"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            266..556
                     /locus_tag="VIY07_01370"
     CDS             266..556
                     /locus_tag="VIY07_01370"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6380435.1"
                     /translation="MATVDQKAVEKDWNARGFSCDLWIDAPGRVWRNFVHETDELVML
                     VEGEEEFEMNGEIHRLEIGQELLIPAGTYHTARNVGRSTSKWLYGYSVRVKS"
     gene            complement(701..1411)
                     /locus_tag="VIY07_01375"
     CDS             complement(701..1411)
                     /locus_tag="VIY07_01375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380436.1"
                     /translation="MGTWKSISVAWLTLVVSSCVAASDMDRTKPAIIRDSFTNGKPEL
                     EWRPYPHFNQDNLKGEIDPSSPEGEPGVGVLSNGIAGGFAALSYAETPTFGDFYLEAW
                     LYVQATEKEKGPLNGIAFRVDPVHDRYYRFSAHFSADPSLSLAYVGKDTNHFPVIVGE
                     WKGASLPPGTPLRSGWHRVAIEVRNNAAEIIWDSVRLTGGPFRLDRVSSGYIGVYATY
                     TGGRGFAETKIDGLRVGR"
     gene            complement(1564..1767)
                     /locus_tag="VIY07_01380"
                     /pseudo
     CDS             complement(1564..1767)
                     /locus_tag="VIY07_01380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015007182.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
     gene            complement(1783..2442)
                     /locus_tag="VIY07_01385"
     CDS             complement(1783..2442)
                     /locus_tag="VIY07_01385"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEY6380437.1"
                     /translation="MKVLALVYPGMTLLDLVGPMQAWSLLPGYEVQYAWHRSGAVPTD
                     CGLSVQATNSFEDAWTDPDVLFVGGGAKPTLDLLGDSATTAFLADRGSRARWVCSVCT
                     GSLLLGAAGLLRGYRAAVHWGAREALNQFGAEPSNERVCVDRNRLTGGGVTAGIDFGI
                     AVAGHWAGESMARVIELILEYAPQPPYGTGRPDLADPQTLATARAAIQQAMTGISAQS
                     R"
     gene            complement(2720..>3181)
                     /locus_tag="VIY07_01390"
     CDS             complement(2720..>3181)
                     /locus_tag="VIY07_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008877556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF899 family protein"
                     /protein_id="HEY6380438.1"
                     /translation="EGCTWVTSQVRELSYIHSRDVTYATFCQGPYEETGRYRDFMGWE
                     MPWYSAQDSLDTLLVGRQVGMMHIVCYLRQRSNVFETYWTTRRGVEAMDNSYRLLDLT
                     VYGRQETWEDSPTGWPQRFKGKQHFRTDGRPTAQWSRLKAGHSDDLGTGRR"
BASE COUNT          688 a          953 c          914 g          626 t
ORIGIN      
        1 gataaaaccg tccgggctcg tagggcgccg gatcgtccac ccgttcaatg attgtgagat
       61 cgggagccgc atcggaccaa tcatgaaaca ggatgcaggc tgcaatggcg tggaaatttg
      121 tgtaatggac gtcggtgcaa gcgatcatac gctccagcgt aataccaggc gcatgcccgt
      181 tcaacgacgg tttcgtctag aaacgttgtt ggtggagcgt tcggaccact tgacgtcctt
      241 ggcatggatc gcaaaaatac tccccatggc aaccgtcgat caaaaagctg tcgagaaaga
      301 ttggaatgca cgtggctttt cctgcgactt gtggatcgat gcgccgggcc gagtgtggcg
      361 aaacttcgtt catgaaaccg atgaactggt gatgctggtt gaaggcgaag aagaatttga
      421 aatgaacggt gaaatacatc ggctggagat cggccaagag cttctcatcc ccgccggcac
      481 ctatcacacc gcgcgcaatg tcggcaggag cacgtcgaaa tggttgtacg gctactcggt
      541 cagagtcaaa tcttgactca agtacttagc ctgaaaccac ttcggatctt cggttcagag
      601 ttcacggtgc acgacgaggt cgatggcgtg gctgaccaca cccggaatca tccggcgcaa
      661 acgaatagga cggactgaac cgcagcgcga tagaaccaac ttagcgcccc acccgcaaac
      721 cgtctatttt ggtctcggcg aacccgcggc cgccggtata ggtagcgtac acgccgatgt
      781 agcccgaact gacgcgatcc aagcgaaaag gaccgccggt aagtcgtacg gaatcccaga
      841 tgatttccgc cgcattgttt cttacttcga tcgcgacgcg atgccaaccg ctccgcagcg
      901 gcgttccggg gggaagagat gctcctttcc actcgccaac gatcaccgga aaatggtttg
      961 tatccttgcc cacataagcg agcgacaatg aaggatctgc agaaaagtgg gcgctgaagc
     1021 gatagtatct gtcgtgaacg ggatcgactc gaaaggcaat gccgttgagc ggcccctttt
     1081 ctttttcggt ggcctgaaca tacagccacg cttcgagata aaaatcccca aaggtgggcg
     1141 tttccgcgta tgaaagcgct gcgaagccgc ccgctattcc attgctgagg acacccactc
     1201 ctggctcacc ttcgggtgat gaaggatcga tctctccttt gaggttatct tgattgaagt
     1261 gcgggtacgg gcgccattca agctcgggct tgccgttggt aaaactgtcg cgaatgattg
     1321 ccggttttgt tcgatccatg tccgacgccg ccacgcagga cgataccacg agcgtcaacc
     1381 aagcgacaga aattgacttc catgtgccca ttcttcgttg ctccctcgcg gatcacgaca
     1441 cgaagacttg ctttcagggt acaaaaaaac atgggccaat caagcttgct gggaggctcg
     1501 tccggaaacc aagtcgcccg ccgtgtagtc gggccggagc atgaagtggt agacgaggag
     1561 ctacgaacag cctttgaaga gatcagcgag ggacgctgtc ccttcgtcgg tctcgaatcg
     1621 gtactccttg tcgacccgga cccacggcag ttcctgccgc cgccgcgcga gctcgtcgct
     1681 aggccgcgtg aattccttct ccgcctggag cagctcgagc cgcgctgtca gccactcgtc
     1741 tctggaaact actctatgct tttccatctc aaacctacgc cattatctac tctgtgcgga
     1801 aataccggtc atcgcctgct ggatcgccgc gcgtgcagtt gccagagtct gcgggtcggc
     1861 caggtcagga cggcccgtcc cgtacggcgg ctgtggcgcg tattcgagaa tcagttcgat
     1921 gactcgcgcc atgctctcgc cagcccagtg cccggccact gcgataccga agtcgatgcc
     1981 cgctgtgacg ccgccgccgg tgagccgatt gcggtcgacg cagacgcgtt cgttgctggg
     2041 ctcagcgcca aattggttga gggcctcccg ggcaccccag tgcaccgcgg cacggtagcc
     2101 tcgcaacagt ccagcggccc ctagcagcag cgagcctgtg cagacactgc acacccagcg
     2161 ggcgcgggat ccgcgatcgg ctagaaaggc ggttgtggcg gaatcaccca gcaggtccaa
     2221 tgtgggcttc gcgccgccgc cgacaaagag gacgtctgga tcagtccaag catcctcgaa
     2281 actattagtc gcttgcacgc tgaggccgca gtccgtgggc accgcaccgg aacggtgcca
     2341 ggcgtactga acttcgtagc ctggcaacaa actccacgcc tgcataggac cgaccaagtc
     2401 caaaagggtc ataccggggt atacgagggc caacactttc atagacgcgc gctcctttgg
     2461 gtcaacaaaa ttgttctgta ctgcaagctc atgtttctga cgcccaacgg acgactacgc
     2521 cgaccgcaat cgaaacggcg tgcgccagca ccggctgcgc cgggttcata ctcatcgcgg
     2581 ctgcacacca aaattggcca cgggccgccg gcttgcgctc actcaatact gatcgtgccg
     2641 gcgcagccac tccatcgaaa agctgaagcc gtcctcgtcg cgacctttgg cggaaggtcg
     2701 aagaaatggt agccgcggtt cagcgcctgc cggttcccag gtcgtcggaa tgcccggcct
     2761 tcagacgaga ccactgggcg gtgggacgtc catcggtacg gaaatgctgc ttgcctttaa
     2821 accgttgtgg ccagccggtc ggcgagtcct cccacgtctc ctgccgcccg tagacggtca
     2881 agtcgagcaa ccgatagctg ttatccatcg cctcgacgcc gcgcctcgtc gtccagtaag
     2941 tctcgaagac attggatcgt tgtcgcaggt agcaaacgat gtgcatcatg cccacctggc
     3001 gtccaaccaa gagggtgtcg agcgagtcct gggccgagta ccaaggcatc tcccagccca
     3061 tgaagtcgcg gtaccgacca gtctcttcgt acgggccttg gcaaaacgtg gcgtaggtga
     3121 cgtcgcgaga atgaatatag gacagctccc ggacctgcga tgtaacccag gtgcacccct
     3181 c
//
LOCUS       DATDHO010000076         3782 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_3279, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000076 DATDHO010000000
VERSION     DATDHO010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3782)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3782)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3782
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3279"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(117..956)
                     /locus_tag="VIY07_01395"
     CDS             complement(117..956)
                     /locus_tag="VIY07_01395"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEY6380439.1"
                     /translation="MNRSYGLLSPRGQVVMWAALALLVFTAFPFAWMASTALKPSREI
                     FVTPPSFWPTHVTFDNVGRLFAETRFLTYFRNSLTVSFATVGLTLLVSVPAAYGLTRF
                     RFYAREKIAGLILFTYMFAPIMIIIPFYVAMRFLGLTNTHVGLILAYTAFCLPFNLWL
                     LRTFFQTIPLEIEEAALIDGSRLQAIIYVVLPLALPGVVATGIFTFILAWNDYIFARV
                     LLSADELKTLPVGIADLYNASVVDWGMIMAAGLLVVAPAAAVFVFIQKFLVAGWGSGG
                     VKG"
     gene            complement(953..1897)
                     /locus_tag="VIY07_01400"
     CDS             complement(953..1897)
                     /locus_tag="VIY07_01400"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEY6380440.1"
                     /translation="MSKAERGRGRALSEPMSGMGSGSFRLPEAAIGMLLLLPAVLLLL
                     LLTLYPVLYGVWISFFNKHSFFPQQTFIGFDNYIFLLRDPEFWAAVWRGTVYALSTIV
                     LQIMLGVATALLLNELFPGRSILRAIVIFPYVVPTVVAVIIWKWLLDSQFGLINYLIE
                     KAGLVDQSISFMGKDWIMVSLIIVSVWQFFPFVVIGVLARLQTIPEELYEAAKVDGAN
                     AWQRFIYVTLPQLQSVLFVIVLLRSIWMFTKFDTPWLMIQGGGAETYIRTLPIYTYMR
                     TFSYYEAGLGSAMAVVMFIALAGAATVYFRIWRREEHL"
     gene            complement(1899..3242)
                     /locus_tag="VIY07_01405"
     CDS             complement(1899..3242)
                     /locus_tag="VIY07_01405"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEY6380441.1"
                     /translation="MPTSRMIALATVLLAGLAAPALAQDKVLRIWHTETEPQTIKAFN
                     NIARRFEARNPGVKIEAEGLAWTDLEGKIMAALAAGSPPELSHGQPITCTAMQSKGLL
                     NPLDEVVKAIGDDNIWEQVKRVCNVGGKQFGLVHAAGTSLLIYRKDMADKAGLKPPKT
                     WTDLLSNAKALTQSTKGDGKIDIYGITLPGDNLFINILMGELIKSNGGVLFDKNNKPL
                     LTDKKMIEVLAFWRELVKYAPPGWEGHGYLQTFQNLYGQKAAMMFQGYGRGAGLIEKF
                     APQEMANDKIFDVWPKPVGPSGTESGVQVDEEPWMLFKDSKHQKEAIEFLKFFYQDDN
                     YLEYVSTVPIHLFPITKSLRASPKYQNLEMIQRWKGWIEVQQNYLDKDQGKPTLVVDW
                     SDMTEKPYLLEVLGSGIIRDMVMDVVLEKWEPQRAAEKAQKRLEDLLRSKGYLKD"
     gene            3401..>3782
                     /locus_tag="VIY07_01410"
     CDS             3401..>3782
                     /locus_tag="VIY07_01410"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEY6380442.1"
                     /translation="MAVNIRYLTREATGGSGMHYDVTIITVRPGTHLQALARLEETFQ
                     PLAGGELLACWYSDIGALNQIMLIRAAPDTMRTHADRERILGSENPFGIGEYIVGMSV
                     DTYVSFPFMQPMKAGQYGPVFEVRT"
BASE COUNT          837 a         1098 c         1090 g          757 t
ORIGIN      
        1 ctttttctgt ctgggaggag cttcgcttgc gcttttcgct gcagcaagac atggacgata
       61 ctgtccgctg atgaccttgg cggtcttatg agaatgacgg aacgtcgcga cgaagatcag
      121 cctttcaccc cgcctgaacc ccagccggca accagaaatt tctgaatgaa aacgaaaaca
      181 gccgccgccg gtgcaaccac caaaaggcca gccgccatga tcatccccca atcgaccacg
      241 ctggcattat aaagatcggc gattccgacc ggcagcgttt tcaattcatc ggcgctcagc
      301 agaacgcgcg cgaagatgta gtcgttccaa gccaggatga acgtgaagat gccggtcgcg
      361 acgacgcccg gcaatgcgag cggcaagacg acatagatga tcgcttgcag gcggctgccg
      421 tcgatcaagg ccgcctcctc gatctcgagc gggatggtct gaaagaaggt gcgcagcagc
      481 catagattga acggcaggca aaaggcggtg taggcgagga tcaatccgac atgcgtattg
      541 gtcagcccga gaaagcgcat ggccacgtaa aatggaatga tgatcatgat cggcgcgaac
      601 atgtacgtga agaggatcag cccggcgatt ttttctcgcg cataaaagcg aaagcgggta
      661 aggccgtagg cggcgggcac cgagacaagc aaggtcaatc caacggtggc gaacgagacc
      721 gtcaggctgt tccgaaaata ggtgagaaag cgcgtctcgg cgaacagccg gccgacattg
      781 tcgaaagtga cgtgcgtggg ccagaaactc ggcggggtca caaaaatctc gcgcgaaggc
      841 ttcaacgcgg tcgaggccat ccacgcgaaa ggaaaagctg tgaacacgag cagcgccagg
      901 gccgcccaca tcaccacttg accgcgcggg ctcagcaaac cgtaggagcg gttcatagat
      961 gttcctctcg ccgccagatg cggaagtaga ccgtggccgc gcctgcaagg gcgatgaaca
     1021 tgaccaccgc catggccgat ccgaggccgg cctcgtaata ggagaaggtg cgcatgtagg
     1081 tgtagatggg cagcgtgcgg atataggtct cggcgccgcc gccctggatc ataagccacg
     1141 gcgtatcgaa ttttgtgaac atccagatcg agcggagcag cacgatcacg aacaacacgc
     1201 tctggagctg gggcagcgtg acataaatga aacgttgcca ggcattggcg ccatcgacct
     1261 tggctgcctc gtaaagctcc tcgggaatcg tctgcagccg cgccagcacg ccgatcacca
     1321 cgaacggaaa gaactgccat acgctgacga tgatcagcga taccatgatc cagtccttgc
     1381 ccatgaagct gatcgactgg tcgacgaggc ctgctttctc gataagataa ttgatgagac
     1441 cgaactgact gtcgagcaac catttccata tgatgaccgc taccaccgtc ggcaccacgt
     1501 aaggaaagat cacgatcgca cgcaggatgc tgcgtcctgg aaacagttcg ttgagcagca
     1561 gagccgtagc gacgccgagc atgatctgca gcacgatcgt agaaagcgca tagacggtgc
     1621 cgcgccacac cgccgcccag aattccggat cacgcaaaag aaaaatataa ttgtcgaaac
     1681 cgatgaaggt ctgctgggga aagaacgaat gcttgttgaa gaaactgatc cagacgccgt
     1741 agagtactgg atagagcgtg agcaaaagca aaaggaggac ggcgggcagc agcagcagca
     1801 ttccgatcgc cgcctccggc aatcggaatg aaccggaacc catgcccgac atgggctcgc
     1861 tcaatgcacg cccgcgcccc cgttcggcct tcgacaactc agtccttcag atagcctttg
     1921 ctgcgcagca ggtcctcgag ccgcttctgc gccttttcgg cggccctttg cggttcccac
     1981 ttctccagca ccacatccat taccatgtcg cgaatgatgc cggagccgag aacttcaagc
     2041 agatatggtt tctccgtcat atccgaccaa tcgacgacaa gggtgggctt gccctggtcc
     2101 ttgtcgaggt aattctgctg cacctcgatc caccccttcc agcgctggat catttcgagg
     2161 ttctgatatt tcggcgacgc gcgcagcgat ttggtgatgg ggaagagatg gatggggacg
     2221 gtcgagacat attcgaggta gttgtcgtcc tgataaaaga atttcagaaa ctcgattgcc
     2281 tctttttgat gttttgaatc cttgaaaagc atccacggct cttcgtcgac ctgcacgcct
     2341 gattccgtgc cgctgggccc gacgggcttc ggccacacat cgaagatctt gtcgttcgcc
     2401 atttcttgcg gcgcgaattt ttcgatcagc ccggcgccac ggccatagcc ctggaacatc
     2461 atcgcggcct tctggccgta taggttctgg aacgtctgca aatagccatg cccttcccag
     2521 ccaggcgggg cgtacttgac gagttcgcgc cagaacgcca gcacctcgat catcttcttg
     2581 tcggtgagga gaggcttgtt gttcttgtcg aaaagcacac cgccattcga tttgatcagc
     2641 tcgcccatca agatgttgat gaagagattg tcacccggca gcgtgatccc gtagatatcg
     2701 atcttgccgt cgcccttggt cgattgcgtt agcgccttgg cattggagag cagatcggtc
     2761 cacgtcttcg gtggtttcaa gcccgccttg tcggccatat ccttgcgata gatcagaagc
     2821 gacgttcctg cagcgtgcac aaggccgaat tgcttgccgc cgacattgca gacgcgcttg
     2881 acctgctccc agatattgtc gtcgccgatc gctttcacga cctcgtcgag cgggttgagc
     2941 agacctttcg attgcatcgc cgtgcaggtg atcggctggc cgtgcgacaa ttcaggcggc
     3001 gacccggcgg cgagcgccgc catgatcttg ccctccaagt cggtccacgc gagcccctcg
     3061 gcttcaattt tgacgcccgg attccttgcc tcgaatcgcc gggcgatgtt gttgaacgcc
     3121 ttgatcgtct gcggctcggt ctctgtgtgc cagatgcgca ggactttatc ctgcgccaaa
     3181 gccggagcgg cgagtccggc gagcagcacg gtcgcaagcg cgatcatcct cgacgtgggc
     3241 atgaccttcc tcccgcgaac gctttttttg tttcaacggg ggcaactctg cggcgcccgt
     3301 tgccatcgcg catccacgct gccgtggccc ggcttgcgac cagatcttcc ggtaactagc
     3361 gtgtctggtc agatgtccaa agacggtagg aattggcaga atggctgtca atatccggta
     3421 cctcacgaga gaggccacgg gaggttccgg aatgcactat gacgtgacga tcatcacggt
     3481 gcggcccggt acgcatctcc aggcgcttgc gcgcctcgag gaaacgtttc agcccttggc
     3541 gggcggcgaa ctgttggcct gttggtattc cgacatcggc gccctcaatc agatcatgct
     3601 cattcgcgcc gctcccgaca ctatgcgcac tcatgccgat cgggagagga tcctggggag
     3661 cgagaatccg ttcggtatcg gtgaatacat cgtcggcatg agcgtggaca cctatgtctc
     3721 gtttccgttc atgcaaccca tgaaggccgg acaatacggt cccgtattcg aggtgcgcac
     3781 ct
//
LOCUS       DATDHO010000077         3735 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_201316, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000077 DATDHO010000000
VERSION     DATDHO010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3735
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_201316"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..594)
                     /locus_tag="VIY07_01415"
     CDS             complement(<1..594)
                     /locus_tag="VIY07_01415"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY6380443.1"
                     /translation="MSGVLAVICGVVWIYLIAGRGKFWLCPVRDAGRPNPELQRWPAV
                     VAVVPARNESKCISASVRSLLGQDYAGALDLIVIDDDSSDGTATNAIHAAESFPGRRM
                     TVIESKGPPPGWTGKLWAQNQGIAAAEKFRPEYLLLTDADIEHAPDTLTWLVGQSSAG
                     HFVLTSLMAKLRCESLAERTHVPAFIYFFQMLFPFSWV"
     gene            829..2325
                     /gene="tcuA"
                     /locus_tag="VIY07_01420"
     CDS             829..2325
                     /gene="tcuA"
                     /locus_tag="VIY07_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent tricarballylate dehydrogenase
                     TcuA"
                     /protein_id="HEY6380444.1"
                     /translation="MLPSSSDVVIVGAGNAAFCAAHAAAEHGVSVLVLERAPEEESGG
                     NSRFTAGAFRCVYDGVDDLRALMPDLTDEEISNTDFGTYTEDKFFDDMGRVTEYRTDP
                     DLCELLVTRSKETMRWMQSKGIRFIPIYGRQAYKINGKFKFWGGLTVEAWGGGPGLVD
                     AHARIARKNAVHVAYNARAVSLIADDDGVKGVRVKHNGRTVEVKARCVVLAAGGFQAN
                     AEMRTRYLGPGWELAKIRGTRFNTGDGIRMALDIGAMPTGNWSGCHAVGWDRNAPEFG
                     DLAVGDNFQKHSYPWGIMINANGERFVDEGADFRNYTYAKYGRVILMQPGQFAWQVFD
                     KKIIPMLRDEYRIKQVTKARADTLEELVKKLDDVDAKRALDTIKTYNKAVRTDIAFNP
                     NVKDGRRTEGLAINKSNWANTIDEPPFEAYAVTCGITFTFGGLKIDTTCRVLDTDGEA
                     IAGLHAAGELVGGLFYFNYPGGTGLMAGSVFGRIAGTTAGQRAAQMPA"
     gene            complement(2357..3514)
                     /locus_tag="VIY07_01425"
     CDS             complement(2357..3514)
                     /locus_tag="VIY07_01425"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HEY6380445.1"
                     /translation="MPPSAKPEPEVLDDRRNRNSTEQKSSARHQSLIDELEASLSQKN
                     IGSRAEILRQITDLFVAGSGYFDGEQMALFDAVMDRLVTELDHSARVVFGETIAGLAN
                     SPPKVTRTLALDDSIDVAGPVLRRSECLDDETLIEGAKTKGQEHLLAISQRTRLSEGV
                     TDVLVERGNQKVIISTAANAGARFSEFGYSTLVTRSENDTELALLVWARPEIPREFLL
                     TLFGTASETVRLKFETTDRAKADLVRKMIKQAADQIQTKLRDHSARYAAARAYVEQLH
                     KNGELSEAQVCKFAELRKFDETAAAMSLLMDLPIGAVELALVHDTGDQILVLAKSIDF
                     SWKTTRAILMLDSGVNAEEYIDRYKKLRRETARSAIQFYRLRERAVKAQAK"
     gene            complement(3504..>3735)
                     /locus_tag="VIY07_01430"
     CDS             complement(3504..>3735)
                     /locus_tag="VIY07_01430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY6380446.1"
                     /translation="LTKRTECAAIIAATLTLARSLDIATTAEGVETVAQYRLLRLAGV
                     TSLQGYLFQPPCSSGEIDFASVFNIPEIENAA"
BASE COUNT          786 a         1070 c         1094 g          785 t
ORIGIN      
        1 cacccatgaa aatggaaaca gcatttgaaa aaaatatatg aacgccggca catgagttcg
       61 ttcggccagg ctctcgcatc gcagcttcgc catcagtgac gtcagcacaa agtggccggc
      121 ggacgattgt cctacaagcc atgtcagtgt atcgggggca tgctcgatat cggcatcggt
      181 aagcaggaga tattcgggcc gaaatttttc ggccgcagcg atgccctggt tctgcgccca
      241 cagctttccg gtccagcccg gcggcggccc tttgctctcg atcactgtca tccggcggcc
      301 gggaaaagat tccgcagcgt ggattgcgtt ggtggccgtg ccatcgctgc tatcgtcatc
      361 aataacgatg aggtcaagcg cgccagcata atcctgcccc agcagagacc gcacgcttgc
      421 tgagatacat ttcgactcat tgcgcgcggg tacgaccgca acgacggcgg gccaacgttg
      481 caattcgggg ttcggtcggc cagcatcgcg gaccgggcaa agccagaact tgccgcggcc
      541 cgcgataaga taaatccaca caacgccgca aatgactgcc agcacaccgc tcattgcagg
      601 aatgtttctg gttgcgtaag acccctgctt ttaacattgg aaaaggcttg ttggttcggc
      661 agattttacg ggttttgagt aacccgctgc tggatttcgc aaaaaacccg gcggaaagta
      721 aggttttgag cggaaaactc cgccatcgag gcatcgcctg ccccagcgcg tcttgcggcc
      781 tgagcaaacg ccggtagtct ccggcgcaac aagaacggat atgctctcat gctcccctcc
      841 tccagcgatg tcgtgatcgt cggtgccgga aatgccgcct tttgcgctgc ccatgccgcg
      901 gctgagcatg gcgtctcggt cctggtgctc gagcgcgcgc cggaagaaga atccgggggc
      961 aatagccgct tcacggccgg tgcctttcgc tgcgtgtacg atggcgttga cgatttgcgc
     1021 gcgctgatgc ccgacctgac cgatgaagag atctccaata ccgattttgg cacctacacc
     1081 gaagacaagt tcttcgacga catgggacgc gtcacagaat atcgcaccga tcccgatttg
     1141 tgcgaattgc tcgtcactcg cagcaaagaa acgatgcgct ggatgcaaag caaaggcatc
     1201 cgtttcattc cgatctatgg acgccaggct tacaagatca acggcaagtt caagttttgg
     1261 ggcgggctga cggttgaagc ctggggtggc gggcccggac ttgttgatgc gcacgccagg
     1321 atcgcgcgca agaacgccgt tcatgtcgcc tataacgcgc gggcagtgtc gctgattgcc
     1381 gacgacgatg gtgtcaaggg cgtgcgcgtg aaacacaatg ggcgcacggt cgaggtcaag
     1441 gccaggtgcg tggtgctggc ggccggaggt tttcaggcca acgccgagat gcgcacgcga
     1501 taccttggtc cggggtggga acttgcgaag atacgcggta cccgcttcaa caccggcgac
     1561 gggattcgta tggcccttga tatcggcgcc atgccgacag gaaactggtc tggctgtcac
     1621 gccgtcggat gggaccgcaa tgcacccgaa ttcggcgatc ttgcggtcgg cgataacttc
     1681 cagaagcact cttacccatg gggcatcatg atcaatgcca atggcgagcg ctttgtcgat
     1741 gaaggcgcgg attttcgcaa ctacacctat gcgaaatacg ggcgcgtcat cctcatgcag
     1801 cccggtcaat tcgcctggca agtcttcgac aaaaagatca tcccgatgct ccgcgacgaa
     1861 tatcgcatca agcaggtgac caaagcgcgg gctgataccc tcgaagaact ggtgaagaag
     1921 cttgatgatg tcgatgcgaa gcgcgcgctt gatacaatca agacctacaa caaagctgta
     1981 cgcacggata tagccttcaa tccgaatgtg aaggatggaa ggcggaccga aggcctggct
     2041 atcaataaat cgaactgggc caatacaatt gatgagccgc cgttcgaggc ttacgcggtg
     2101 acctgcggca tcacctttac cttcggcgga ctgaaaatcg atacaacatg tcgcgtgctg
     2161 gacaccgacg gcgaggcgat cgcaggactg cacgcggcag gcgaactggt cggtgggctc
     2221 ttctacttca actatccggg cggcaccggc ctcatggcgg gctcggtatt cggcaggatt
     2281 gccggcacca ccgccggtca gcgcgctgca cagatgcccg cgtagccgct atcccggcgc
     2341 cacgaatgcg tactgcttac ttcgcctgcg ctttaactgc gcgttcgcgc agtcgataaa
     2401 attgtatggc agaccgggcc gtttcccgcc gcagcttctt atatcggtcg atgtattctt
     2461 cggcattgac gccgctatcc agcatgagaa tggcgcgggt cgttttccag gaaaaatcaa
     2521 tcgatttcgc caataccaga atttgatcgc cggtatcgtg caccaatgcg agctcgacag
     2581 ctccaatggg caggtccatc agcaaagaca tcgctgctgc agtctcgtcg aatttgcgca
     2641 gctcggcgaa cttgcacacc tgcgcttcgg agagctcgcc gttcttgtgc aattgctcga
     2701 cgtatgcgcg tgcagctgca tatcttgccg agtggtcgcg caatttcgtt tgaatctggt
     2761 cggccgcctg cttgatcatc ttccgtacca ggtccgcctt ggccctgtcc gtggtctcga
     2821 atttgagccg tacggtttcc gatgccgtcc cgaacaaggt cagcaagaac tcacggggaa
     2881 tttccggacg tgcccaaacc agcaacgcaa gctcggtatc gttctcagat cgcgtgacca
     2941 gggtggagta gccgaactca gagaagcgcg cgccggcatt ggcagcggtg ctgataatta
     3001 ctttctggtt tccacgctcc acgagcacgt cggtgacgcc ttcgctcagg cgagtgcgtt
     3061 gcgagattgc gagcaggtgc tcctgccctt tggtcttcgc cccctcgatc agcgtctcgt
     3121 catcaagaca ctctgacctt cgaagcacag gaccggcgac gtcgattgag tcgtcaagcg
     3181 cgagcgtcct ggtgaccttg ggcggtgagt tcgccaggcc ggcaatcgtc tccccgaaca
     3241 cgacgcgggc ggaatggtct aattcggtga caagacgatc catgacagcg tcaaagagtg
     3301 ccatttgctc gccgtcaaag tagccggagc cggctacaaa caaatccgtt atctggcgca
     3361 ggatttcggc ccgcgaacca atgtttttct gcgagagtga cgcttccaat tcgtcgatta
     3421 gcgactggtg gcgtgccgag ctcttttgct cggtggaatt ccgattccgc cgatcgtcca
     3481 aaacttccgg ttccggcttc gcgctaggcg gcattttcga tctcgggaat gttaaagacg
     3541 ctggcgaagt ctatttcgcc tgatgagcaa ggtggctgaa acagataacc ctgcagtgat
     3601 gtcacgccag cgagccgcag aagccgatat tgtgcaacgg tttccacgcc ttcggcggtt
     3661 gttgcgatgt ccaggcttcg ggcgagcgtc aaggtggctg caataatggc ggcgcactcg
     3721 gtgcgcttcg tcagg
//
LOCUS       DATDHO010000078         2421 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_152048, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000078 DATDHO010000000
VERSION     DATDHO010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152048"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            264..860
                     /locus_tag="VIY07_01435"
     CDS             264..860
                     /locus_tag="VIY07_01435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380447.1"
                     /translation="MSELISEVAQSVAAYAYRPTVMGAMREFKLSEDGIDWAVGAVSG
                     HIPYRNIRRLRMSYRPNSMQSHRFLTELWGEGAPRLKIASSSWKSMVEQERLDRAYSA
                     FVRELHRRVSKAAPAACFEKGHNPFLYWPSLVVFVAVAFGIAALCVRALQAGTYAGAA
                     FIGAFFAFYLWHSTNFLRRNRPGRYDAHALSQDVMPAP"
     gene            complement(880..1305)
                     /locus_tag="VIY07_01440"
     CDS             complement(880..1305)
                     /locus_tag="VIY07_01440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY6380448.1"
                     /translation="MYKKILVPVDLADTDLAKPAIDAAIEMARASGGSIRLVNVLAMT
                     PVMLAEYVPPDFDVQQRKSSEEALGIISQECGLDAARVSATVRQGGIYHEVLEEAKTF
                     GADLIVMSSHRPAMRTYFLGSNAGHVVRYAKCSVLVVRH"
     gene            complement(1378..1911)
                     /locus_tag="VIY07_01445"
     CDS             complement(1378..1911)
                     /locus_tag="VIY07_01445"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY6380449.1"
                     /translation="MPMRRLLLFRHAKAERSHAGAEDKARKLIDRGRADAAKVGSYMA
                     SHALIPDRVLTSPSTRTRETWKFACAAFRSPLSATQVEALYAATAHAILGVVKGTSPA
                     IHTLLVIGHNPGLHELAVMLIASGDVEARERLKEKLPTSGLVIIDFAFDDWSRLHPQC
                     GRLERFVTPKSLASASN"
     gene            2011..>2421
                     /locus_tag="VIY07_01450"
     CDS             2011..>2421
                     /locus_tag="VIY07_01450"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY6380450.1"
                     /translation="MEAGWYEANSVARPDRPRLTVDLDVDVCVIGAGLAGLTVAREIA
                     QRGWSVAVLEAATVAWAASGRSLGFVLPGFPEDIGDIVERIGLDHAKQLWSLSEQGLE
                     YVRSTILDTRMPGVDLINGWLHVSKTNNSEEQRAE"
BASE COUNT          493 a          694 c          738 g          496 t
ORIGIN      
        1 gaattgtcct tgcgcgcggc ctctaatgcg ccttcgacaa cggcggcgct ggagggcggg
       61 attgagatcc cctggtggcc agtgcgctca gtcaatgcgc gatccctccc gaccccgaca
      121 ctcacgagca gcccgcacgc cacgatgttg gaggtacgat attataacgc ctcattctaa
      181 cgcctcagct ttggaaacac ttgcggccgt cgcctgtggg tttcacacag tgaactggat
      241 agttgcgcag cgagggaaat ggcttgagcg aactgatatc tgaagttgca cagagtgtcg
      301 ctgcctacgc ctatcggccg acggtgatgg gtgcgatgcg ggaattcaaa ctttcggaag
      361 acggcattga ttgggccgtt ggcgccgtct cgggccatat cccttaccgc aatattcgcc
      421 gtttgcgcat gtcctatcgg ccaaacagca tgcaatcgca tcgtttcctc accgaattat
      481 ggggggaggg cgcgccgaga ctgaagatcg cctccagttc ctggaaaagc atggtggagc
      541 aggagcgact ggaccgtgcc tactcagcct tcgtgcgcga attgcaccgc cgtgtttcga
      601 aagccgcacc cgccgcatgc ttcgaaaaag gccataaccc atttttgtat tggccaagcc
      661 tcgtcgtttt cgtggcggtg gctttcggaa tcgccgcctt gtgtgtgcgc gcgttgcagg
      721 ctggaacgta tgcgggcgcc gcattcatcg gcgccttctt tgcgttctat ctttggcaca
      781 gcacaaattt tcttcggcgc aatcggccag gcagatatga cgcgcatgcc ttgtcccaag
      841 acgtcatgcc agctccctga cgaaccagcg aaagcgattt tagtgacgaa cgacgagcac
      901 cgaacacttg gcgtaacgga cgacgtgccc cgcgtttgag ccgaggaaat atgtccgcat
      961 ggcaggccga tgcgagctca tcacgatcag gtcggcgccg aacgttttcg cttcctcaag
     1021 gacctcgtga taaattccgc cctgacgtac ggttgccgaa acacgggcgg catcgagtcc
     1081 gcattcctgc gaaataatgc cgagggcttc ctccgatgac ttgcgctgct ggacgtcgaa
     1141 atcgggtggg acgtattccg ccagcatgac cggcgtcatg gcaagcacgt tgacaagtcg
     1201 gatagatccg cctgatgccc gggccatttc gattgcggca tcgatagcgg gcttggccag
     1261 gtcggtatcg gcaagatcga ccggcaccag aatcttcttg tacatgacag cgcccctctt
     1321 ttcgctgcgc gggtacaata tgacatgttt ttgaaggcgc gttgagccag atttgcctca
     1381 attggacgca gaggccaggg attttggcgt cacgaaccgt tcaagccggc cgcattgcgg
     1441 atgcagccgc gaccagtcat cgaaggcgaa atcgatgatg acaagaccgc tggtaggcaa
     1501 cttttccttc agtcgttcac gcgcctcgac gtcgccggac gcgatcagca tgaccgcaag
     1561 ctcgtgaagg cctggattgt gtccgataac aagaagcgtg tgaatggccg gactggttcc
     1621 tttaacgacc ccgaggatgg catgcgcggt tgcggcatag agcgcctcca cttgcgtcgc
     1681 agacagcgga gaacgaaatg ccgcgcaggc gaatttccag gtttcccgcg tccgcgtgga
     1741 aggggaggtt agtacccgat cggggatgag cgcatgagaa gccatataac tgccgacctt
     1801 ggcagcgtcg gcgcgcccgc ggtcgatcag tttgcgggcc ttgtcctccg cgcccgcatg
     1861 cgagcgttcg gccttggcgt gacgaaatag caaaagtcgg cgcatgggca tgctatggag
     1921 atcgctggcg gacaacacta gcacgccttc gccagccgcg gagcggcgaa gtatcaacca
     1981 ccagtagagt tcaggagcgg aagcaggaac atggaagcgg gatggtacga agcgaacagc
     2041 gttgcgcgtc cggaccgtcc gcgcctgacc gtcgacctcg atgtcgatgt gtgcgtaatc
     2101 ggggcggggc tcgccggtct caccgtcgcc cgcgaaattg ctcaacgggg ctggtcagtc
     2161 gctgtcctcg aggctgccac ggtcgcatgg gcagcctcgg gccgcagttt gggttttgtg
     2221 ctcccgggat ttcccgaaga tatcggtgac atcgtcgaac gcatcggtct cgatcacgcc
     2281 aaacagcttt ggagcttgtc cgaacaagga ctcgagtatg tccggagcac gatactggac
     2341 acgcggatgc ccggcgttga cctcatcaat ggttggctgc atgtgtcgaa aaccaacaat
     2401 tccgaagagc agcgtgccga a
//
LOCUS       DATDHO010000079         2085 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_300490, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000079 DATDHO010000000
VERSION     DATDHO010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_300490"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(219..1499)
                     /locus_tag="VIY07_01455"
     CDS             complement(219..1499)
                     /locus_tag="VIY07_01455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY6380451.1"
                     /translation="MTEITRRSFNLLAGASLATLSTPLFAPSVLGQAKPRLVVVGGGP
                     GGATVARYVAKDSAGAIDVTLIEPLKNFTTCFFSNLYVGGFRDLKSLRHNYDKVRKGG
                     VNVVPVMASSIDRDKKQVWIAGGSRVPYDRLVIAPGIDLKWDSVPGYSEDAAQIMPHA
                     WKPGAQTELLVRKLNALKDGDLIVMVAPPNPFRCPPGPYERASMFAHVLKKKGHKKSK
                     IIIIDTKPTFSKQAVFMEGWEKHYPGMIEWQDPKMHGGIKGVDPKTGEVKTDLSTYKA
                     KLANVIPAQMAGKIARDAGLADQSGYCPIDPESMKSKVDANIFVVGDAAIPGDMPKSA
                     FSANSQAKVAAMVIRAELTQSRAFPARYTNTCWSLIAPDDDIKIGANYEPGEGKIKQT
                     TGFVSQKGEPADVRKQNYKESVDWYNGIVADVFG"
     gene            complement(1515..1877)
                     /locus_tag="VIY07_01460"
     CDS             complement(1515..1877)
                     /locus_tag="VIY07_01460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380452.1"
                     /translation="MPKAMARQFCARRGRQTLDGVFAATTTFMLIIGGLTTAYGVDVE
                     LGRYLSSECMTCHGTAKADSTIPNIFGLGEAHFVEVIRAYRDKKLPNPVMQTIASRLK
                     DDEIAALALYFQTAKKPK"
BASE COUNT          416 a          622 c          585 g          462 t
ORIGIN      
        1 catgaaaacc ggatcaacac catcgatctg caccagcccg tcgctcaggg gacgggtgcg
       61 gtcatagtcg cggacagcaa cggaaagatt gagtttggcc atgcagcgcc cgaacctgga
      121 gccatgtggg gcgccagtca taggcgaaag cacgccgcaa cgcaaaaacg gcggccgctt
      181 ggccgccgtt ttgcatgtta aaaaactgac gatttcgatc agccgaacac atcggccacg
      241 atgccgttat accagtcgac cgactccttg tagttttgct tgcggacatc agcgggctcg
      301 cctttctggc tgacgaaccc ggttgtctgc ttgatcttgc cctcgcccgg ttcgtagttc
      361 gcgccgattt tgatgtcgtc gtcgggcgca atcaggctcc agcacgtatt agtgtagcgt
      421 gccgggaaag cgcgcgattg ggtgagctcg gcccggataa ccatcgctgc caccttggcc
      481 tggctgttgg cggagaaggc cgattttggc atgtcgccgg ggatagccgc gtcgccgacc
      541 acgaagatat tggcatcgac cttcgacttc atcgattccg gatcgatcgg acaatagccc
      601 gattgatcgg cgaggccggc atcgcgcgcg atcttgccgg ccatctgcgc cggaatgacg
      661 ttggcaagct tggccttgta agtggagaga tcagttttca cctcaccggt cttgggatcg
      721 acacccttga tgccgccatg catcttggga tcctgccact cgatcattcc gggatagtgc
      781 ttctcccacc cttccatgaa caccgcctgt ttggagaacg ttggcttcgt atcgatgatg
      841 atgatcttcg atttcttgtg gcccttcttc ttgagcacgt gcgcaaacat cgatgcccgc
      901 tcataaggac cgggcggaca acgaaacgga tttggcgggg ccaccatcac gatcaggtcc
      961 ccgtccttga gcgcgttgag cttcctgacc aataattcgg tctgtgcgcc cggcttccag
     1021 gcatgcggca tgatttgcgc ggcatcttcg gaatagccgg gcacggaatc ccatttgaga
     1081 tcgattccgg gcgcgatcac cagccggtcg tacggaaccc gactgccccc cgcgatccac
     1141 acttgcttct tgtcgcggtc gatcgaggac gccatgaccg ggacgacgtt aacgccgccc
     1201 ttgcgcacct tatcgtaatt atgcctcagc gatttcaggt cgcggaaacc cccgacataa
     1261 agattcgaga agaaacaggt cgtgaagttc ttcaacggct cgatcagcgt cacgtcaatc
     1321 gcaccggccg agtctttcgc cacgtagcgt gcaaccgttg ctccacctgg cccgccaccc
     1381 acgacaacaa ggcgcggctt ggcctggcca agaaccgatg gcgcgaacaa cggcgtggag
     1441 agagttgcga gcgaagcgcc cgcaagcaaa ttaaagctgc gacgcgtaat ttcagtcatg
     1501 gtcaccccct cggtctattt tggtttcttt gcggtctgaa aataaagagc cagggcggca
     1561 atctcgtcgt ctttcagccg gcttgcaatg gtctgcatga ccggatttgg cagcttcttg
     1621 tcgcggtaag ccctgatgac ttccacgaag tgtgcttcgc ccagtccgaa aatattgggg
     1681 atcgtactgt cggctttggc agtgccgtgg catgtcatgc actcggatga aagatatcgg
     1741 ccgagttcga cgtcaacgcc gtaagccgtg gtcaaaccgc cgatgatcag cataaaagtt
     1801 gtcgtggccg cgaacacgcc atcaagtgtt tgccggcctc gtcgcgcaca aaactgacgg
     1861 gccatcgcct tcggcatggc gcctttccca aaccccggtc gccgcgtagt ttcgtcttgt
     1921 tttgcctttt gcactccagc gaccaagtgt cacagtgcga atgactaatc aacgccgcgc
     1981 ttctgcgtct tctcgtccgg cgttacgtcg atggcccctg cgcggccaat gattttaacc
     2041 tgcccacggc aatcgttcat gcagggattg ggattccaga aggct
//
LOCUS       DATDHO010000080         1790 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_3460, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000080 DATDHO010000000
VERSION     DATDHO010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3460"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(187..1149)
                     /gene="phnD"
                     /locus_tag="VIY07_01465"
     CDS             complement(187..1149)
                     /gene="phnD"
                     /locus_tag="VIY07_01465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020810070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0043168 - anion binding [Evidence IEA];
                     GO_function: GO:0043225 - ATPase-coupled inorganic anion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY6380453.1"
                     /translation="MHRQMKVFAGALLALIIGGALGTLQAQDCPRGDLDKAYCDRNND
                     LVADTPSQTVNPPTLVFAYTPVEDPSLYSKVWDGFLRHLEKVTGKKVVFFPVQSNAAE
                     IEAMRSGRLHIAGVSTGPTPIAVNCAGYIPFAIMGSKDGRFGYEMEIIVPADSSIKTP
                     ADIKGKKLAFTAPTSNSGFKAPSVLLESEFNLVAKRDYEPVFSGKHDNSVLGVANKDY
                     DAAAIANEVMVRMFERNVVDKTKIRSIYKSETFPTTSYGTAHNLDPALQEKIKDAFFT
                     FPWEGSALKAEFKTEDRFVPITYQKDWSVVRKIDAASGVKYACK"
BASE COUNT          367 a          517 c          513 g          393 t
ORIGIN      
        1 gggatcggtc ggcagatcgg cgaccagatc accatttcgg tcgcagtagg cctggtcgag
       61 ggtcccgcgc gggcaatcct cctgtgcgga tgccactgtg ctgaggctaa aaacaccgag
      121 caaggccgaa acagcaatca aagaaccatt ccaacgcatg ccttgcgctc cgcggaagct
      181 gcactgtcac ttgcaggcgt acttcactcc gcttgccgca tcgatcttgc gaaccacgct
      241 ccagtccttc tggtaggtga tcggtacgaa ccggtcctcg gtcttgaact cagctttaag
      301 cgccgagcct tcccagggga aagtgaagaa ggcgtccttg atcttctcct gcagcgccgg
      361 gtcgagattg tgggccgtcc cgtagctggt ggtcggaaac gtttcggatt tgtagatcga
      421 ccgtatcttg gtcttgtcca caacgttgcg ctcgaacatg cggaccatca cctcgttggc
      481 aatcgccgcc gcgtcatagt ccttgttggc gacgccgagt accgagttat cgtgcttgcc
      541 ggagaaaacc ggctcatagt cgcgcttcgc caccagattg aactccgatt ccagaagaac
      601 ggacggcgcc ttgaagccgg agttcgaagt tggtgcggta aaggcgagct tctttccctt
      661 gatgtcagcc ggcgtcttta tggagctgtc agccggcaca atgatttcca tttcatagcc
      721 gaagcggcca tctttactgc ccatgatggc gaagggaatg tatcccgcgc aattcacggc
      781 gatcggtgta gggccggtac tcactccggc aatatgcagc cgaccagaac gcatcgcttc
      841 gatctccgct gcgttcgact gcaccgggaa gaacacgact ttcttgcctg tcaccttctc
      901 aagatgcctg aggaagccat cccacacttt gctatagagg gaggggtcct ctacgggggt
      961 gtatgcaaag acgagcgtcg gtggattcac ggtctgcgaa ggcgtatcgg cgacgagatc
     1021 gttattgcga tcgcaatacg ccttgtcgag gtcgccgcgc ggacaatcct gcgcctggag
     1081 cgtcccaagg gcaccgccga taatgagcgc caaaagcgcg ccagcaaaaa ccttcatttg
     1141 cctgtgcatg gtcgttcccc ctgcggttgc caaaggcggc tccggtcgtg tcgattagtc
     1201 tttgtggcag cttagcccac tattcgggta agcggaattg cgtgccgcga catcaattgg
     1261 tccggtaatg cagcgtttgc cgcgcttgtg agcggtgaac tccccggaga ttggttaccc
     1321 atccgaattg tcatcgacgt cggcaacacc gcccgtcgca atgctggaac cttgtccgct
     1381 gtttttttat ccacagtgtc gcaacagcca taggaatgcc ggcgacagtc gccttatggt
     1441 gtcgttcggg catgcaaagc ggggcgcctt cctgaaacat ctgcagtcga gtgtgacgca
     1501 caagtgtaac gacggcagca tctcgtttct cgtccccgaa aactcgcgca ttgccggcag
     1561 cttcagggag cgaaaacaga acccatggaa tccgccagat cgaagcaagt acctgctctg
     1621 atagcagtgg tgttgatgat accgtttttt ggttcgaccg cgatggcgga aacccaggca
     1681 gagcgacagg cctgcatcgg cgatgcattt agagtctgct gggcggccat tccagatcgg
     1741 aacctggtat ttcgctgcct aatggacaac cggcctcgcc taaacccggc
//
LOCUS       DATDHO010000081         1713 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_3543, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000081 DATDHO010000000
VERSION     DATDHO010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3543"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1058
                     /locus_tag="VIY07_01470"
     CDS             <1..1058
                     /locus_tag="VIY07_01470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380454.1"
                     /translation="DGGSVLGAIALGREIRKLKLTTTVGRLIDLPAEGQQDGARAVLS
                     PNADCESMCAFVLLGGMRRLVPSDARVMVHQIWLGDRREDPTAANYSAEDLVLIQRDI
                     GRLAQYTAEMGATADLLDLALRIPPWEPMHALTRAELKRTRLTTEDPEIPVAAPVTAS
                     SPTPAAQPSPRGTNGLRPTAISEQRWALVDRSGVATLARRHPLTVEGEEIGSFDLVVA
                     CAAGGDGYDVTYIERRHSAEQKPLPDVLAGISLRVGSNFAGLKVVSSERRTGPDELIT
                     YAAGRVPSALINAFAAAGSRSMLVKTETSNLVTGIRIGNTGASQNVPRLTAGCSKSGN
                     DRADLPRTKAGGLAAAK"
     gene            complement(1060..1518)
                     /locus_tag="VIY07_01475"
     CDS             complement(1060..1518)
                     /locus_tag="VIY07_01475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein"
                     /protein_id="HEY6380455.1"
                     /translation="MLNEVYNERILDLAGNIPRLGRLSAPDATATAHSKLCGSTVTVD
                     LRMSGDEVADFAHDVKACALGQASSSIMARHVIGAKPAELRELRETVRKMLKENGPPP
                     AGKWADIAVLEPVRDYKARHASTLLTFDAVVSALDQIEAKSASKGTQAAE"
BASE COUNT          326 a          517 c          548 g          322 t
ORIGIN      
        1 ctgacggtgg ctcggtgttg ggcgcgatcg ccctgggccg cgaaatccga aagctcaagc
       61 tgacgacgac ggtcgggcgc ctgatcgatc tgccggccga gggtcagcag gacggcgcac
      121 gcgccgtgct ttcgccgaac gctgattgtg agtcgatgtg cgccttcgtt ctgctcggag
      181 gaatgcgacg cctggttccg tcggatgcgc gggtgatggt tcaccagatt tggctcggcg
      241 atcgccggga ggatcctaca gccgcgaatt actcggcgga agatcttgtg ctcattcagc
      301 gtgatatcgg ccgactcgca caatacacgg ccgaaatggg agcaaccgct gatctgctcg
      361 acctggcgct gcgcatcccg ccctgggagc cgatgcacgc attgacgcgt gctgaattga
      421 agcgcacgcg cctgaccacc gaagatcctg aaatcccggt cgccgcaccc gtcacagcct
      481 cgtcgccgac gccagcggcg cagccatctc cgcggggtac caacggcttg cgcccgacag
      541 caatcagcga gcagaggtgg gctcttgtcg atcgctcggg cgtcgccacg ctcgcgcgcc
      601 ggcatccact gactgttgaa ggcgaggaga tcggcagttt cgatctggtc gtcgcgtgtg
      661 ccgccggcgg tgatgggtat gacgtgacct atattgagcg acgtcattct gccgagcaaa
      721 agcccttgcc tgacgtattg gccggcatca gcctgcgcgt cggcagcaat tttgcggggc
      781 tcaaagtcgt ttcttcagaa cggcgaacgg gtccggacga gctgataacc tacgcagcgg
      841 gtcgcgtccc aagcgcactc atcaatgcgt ttgccgccgc cggcagccgt tcgatgctgg
      901 tcaagacgga aacgtcgaac cttgtcacgg gaattcgcat cggcaatacg ggtgcttcgc
      961 agaacgttcc gcggttgacc gcaggctgca gcaagtccgg caatgaccgt gcggatttgc
     1021 ccagaacgaa agcgggcgga ctcgccgcgg caaagtagat tattcggcag cctgcgtgcc
     1081 cttgctggcc gacttggcct cgatctggtc gagcgccgaa accacggcat caaaggtcag
     1141 caaagtcgag gcgtggcgcg ctttatagtc ccgcaccggc tcgagcacgg cgatatcggc
     1201 ccatttcccg gcaggcggcg ggccattctc cttaagcatt ttgcgaaccg tttcgcgtaa
     1261 ctcgcgaagt tcggccggct tcgccccgat gacatggcga gccatgatcg acgatgaagc
     1321 ttgccccaag gcacaagcct tcacgtcgtg ggcaaaatcc gcgacctcat caccactcat
     1381 cctgaggtct acggtcaccg tagaaccgca cagctttgaa tgcgcggtgg cggtggcatc
     1441 gggcgcagac aatcggccaa ggcgagggat gttacccgcc aggtccagaa tgcgctcgtt
     1501 gtaaacctcg ttaagcattg gcgttttttc ggtattccaa agagccgatt tgcgtgtgcg
     1561 acgcaaatga atatataggg gctgatgcgg cgccgcgaaa agggtttgcg gcgccggcga
     1621 gtcacaacgg ctcgttaggt ggaaatgcgg cgtccagacg gcctatggtc ccgaagcggg
     1681 tccggagcgg gtaactgacg cggccaaccc ggt
//
LOCUS       DATDHO010000082         2520 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_350266, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000082 DATDHO010000000
VERSION     DATDHO010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350266"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(251..1240)
                     /locus_tag="VIY07_01480"
     CDS             complement(251..1240)
                     /locus_tag="VIY07_01480"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HEY6380456.1"
                     /translation="MTAKPRIFVTQPIAESALKRLRALANVKVFPDDSRIIPHRALVA
                     AVRKADILFCLLHDKIDRAVIAANPKLRHIAAQSITPSNIDVAEATARRIPVTVVPPV
                     TTEATADLTFGLMLAVARRMLEGDRLVRTGKFPGGQSRHLLGSFVHGKTLGLVGGGGL
                     IGKAVAKRAQGFSMRVLYWTPRRKPEGEEREAGLTFVPLDQLLRESDFVSLHSPLNAE
                     TRHQIGAREIGLMKKSAFIINTARGAIIDETALVRALKGRKIAGAGLDVFEHEPKVHA
                     ELKRLKNVVVVPHLGSATVEVREEMANIVVDNIDALLGGRMPPNCVNPQVLGK"
     gene            complement(1237..>2520)
                     /locus_tag="VIY07_01485"
     CDS             complement(1237..>2520)
                     /locus_tag="VIY07_01485"
                     /inference="COORDINATES: protein motif:HMM:NF013491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HEY6380457.1"
                     /translation="AVMTPFVLPLDDPSAANPERVGPKAANLAGLMQAGLPTPGGFAL
                     TADAYQQQVKHLGIRDLLRQYSEADLPNSRRISIQIRLALYQRPIAPEILAPLLAAWR
                     KQREQAPLGVVRSSALIEDRKGANFAGQFESFLGLSDETEFLTAVRACWAALWTSHAR
                     RYMDNHGLSPADTAMAVLIQPLVSARASGGGLSETAEGQMLISATWGLGSAIAQGEVV
                     PDRILLSKTGFLRTIEAGRKGHRDTCAHGVSAPELVPKELVSEPCLSPGEAVTLGRLL
                     RKCEQLAGGPVEVEWAADDTGFMLLQSRPLHMEPAVVPDEIWLQHPGLNGHPAGIGWG
                     SGRAVVVNCECELSRVAPGDVLVTRVAGPALSPILPRVSGVVAELGGSTSHLASLARE
                     RGIPMVLGVLDATRKIPDGAQCAVDGVAGIVRWLR"
BASE COUNT          483 a          814 c          774 g          449 t
ORIGIN      
        1 gtgtcgacca ccagcatttt cgcgtcgacg ccgtgtttcc tgaagaagcc tttctcggcc
       61 ccgatgaaca tgggcagatg gccgaaattg tttccgatga ccacgtcaag cttgggcaag
      121 tccgccatcg attttcctcc cgatccgctg gcgtcgtctc gcaaaagcgg agatccagcg
      181 ttcattcact gtcgatctta gctcaaacgc cggagaaatc ggatttcctt tggcgggcga
      241 tgatcgaccg tcacttgccc aacacctgcg gatttacaca gtttgggggc atccgcccac
      301 cgagcaacgc atcgatatta tccaccacga tgttcgccat ttcctcgcgt acctcgaccg
      361 tggcgctgcc aagatgcggc actaccacga cgtttttcag ccgcttcagt tcggcatgca
      421 cctttggttc gtgctcgaac acgtcgagac cggcgcctgc gattttcctg cctttaagcg
      481 ctcgcaccaa agcggtttca tcgatgatgg cgccgcgcgc ggtattgatg atgaaggcag
      541 acttcttcat caggccgatc tcgcgtgcac cgatctgatg ccgggtttcc gcgttgagcg
      601 gtgaatgcag cgagacgaaa tccgattcgc gtaacagctg atcgagcggc acgaacgtga
      661 gaccggcttc cctctcctcg ccctccggct ttcggcgcgg cgtccaatag aggacccgca
      721 tggagaagcc ttgggcgcgt tttgccaccg ctttgccgat gagcccaccg ccgccgacga
      781 ggcctaaggt cttgccgtga acgaatgacc cgagcaaatg ccgggattgc ccaccgggga
      841 acttgccggt gcgcaccagc cgatcgccct ccagcatgcg gcgcgcaacc gcgagcataa
      901 gtccgaacgt gaggtctgca gtcgcctcgg tcgtgaccgg cggcacaacc gtgacgggta
      961 tgcggcgcgc cgtggcttcg gccacgtcga tgttcgacgg cgttatcgat tgcgcagcga
     1021 tatggcgcag cttcggattg gctgcaatga ccgcgcggtc gattttgtcg tggagcaggc
     1081 aaaagaggat atcggccttg cgaaccgcgg cgacaagcgc acggtgggga atgatcctgc
     1141 tgtcgtcggg aaaaactttc acgtttgcca gcgcccgcaa ccgcttgagc gcgctttcgg
     1201 cgatcggctg ggtaacgaag atgcggggct tggccgtcac cgcagccacc gcacgatacc
     1261 ggcaactccg tcaacggcac actgcgcgcc atccgggatc ttgcgcgtgg catccagcac
     1321 ccccagcacc atcggaattc cgcgctcgcg cgcaagcgaa gccaggtgcg aggtggagcc
     1381 tccgagctcg gcaacgacac cggagacgcg cggcaagatc ggactgagag ccggccccgc
     1441 cacgcgcgtg accagcacat cgccgggcgc aacccgcgac agttcgcatt cgcaattgac
     1501 cacgaccgcg cggccggagc cccagccgat gcctgcaggg tgaccattca gacccggatg
     1561 ctgcagccag atttcgtccg gcaccacagc cggctccatg tgcagcggac gcgattgcaa
     1621 gagcatgaaa ccggtatcat ccgcagccca ttcaacctcg acgggaccgc ctgccagttg
     1681 ctcgcacttg cgcaagaggc gaccgagcgt cacggcttcg cccggcgaaa ggcagggttc
     1741 gctgacaagc tccttcggga ccagctcggg ggcggacacg ccgtgcgcgc aagtatcgcg
     1801 atgtccctta cggccggcct cgatggtgcg gaggaagccg gtcttgctca gcaggatgcg
     1861 atccggcacc acctcgccct gggcaatcgc tgaacccagg ccccacgtcg ccgaaatcag
     1921 catctgacct tcggcggtct cgctcaatcc gccgccggaa gcacgcgccg acacaagagg
     1981 ctggatcaat acagccatcg cggtatcggc cggagaaaga ccgtggttat ccatgtaacg
     2041 gcgggcgtgc gaggtccata aggccgccca acaggcgcgc actgccgtca ggaattccgt
     2101 ttcatctgaa agcccaagaa agctttcgaa ctggccggcg aagtttgcgc ccttgcggtc
     2161 ctcgatcaat gccgacgacc gcacgacgcc caatggcgcc tgctcgcgct gcttgcgcca
     2221 ggcggcgaga agcggcgcaa gaatttccgg cgcgatcggg cgttgataaa gcgcaagcct
     2281 gatctggatc gagatgcggc gcgagttcgg gagatcggct tcgctatatt gccgcagcaa
     2341 gtccctgatg ccgagatgct tcacctgttg ctggtaggca tccgcggtga gcgcgaaccc
     2401 gcccggtgtt ggcaagcccg cctgcatcaa gccggcgaga ttcgctgcct tgggcccgac
     2461 ccgctcgggg ttggcagcag agggatcatc gaggggcagg acgaaggggg tcatcacggc
//
LOCUS       DATDHO010000083         1624 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_448720, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000083 DATDHO010000000
VERSION     DATDHO010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448720"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            354..1031
                     /gene="rimP"
                     /locus_tag="VIY07_01490"
     CDS             354..1031
                     /gene="rimP"
                     /locus_tag="VIY07_01490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEY6380458.1"
                     /translation="MATGDTLQTHAASSAAPSEPRLIVEPGLSARVASIVEPVIEQLG
                     YRLVRVRVSGAEGCTVQIMAERPDGSMTVEDCEAVSRALSPVLDVADPIDRAYRLEIS
                     SPGIDRPLVRKSDFERYAGHVVRIETAMPIQGRKRFRGTLMGTEGEAARIRRDDATVG
                     EEAEILLPIEEMSEAKLVLTDQLVAEALRREKSAKREAREARKEVRREERQSRHRPQR
                     PAVKGGE"
     gene            1035..>1624
                     /locus_tag="VIY07_01495"
     CDS             1035..>1624
                     /locus_tag="VIY07_01495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEY6380459.1"
                     /translation="MAVSANRLELLQIADAVAREKAIDRGIVIAAMEDAIAKAARSRY
                     GAETDVHAEIEPKTGDLRLTRHMLVVESVENPSNQITLEEARKRHPAAQVGDTIADPL
                     PPLEYGRIAAQSAKQVIVQKVREAERDRQYAEYKDRIGDIVNGIVKRVEYGNVIVDLG
                     RGEAIIRRDELIPRENFKYGDRVRAYVYDVRREQRGP"
BASE COUNT          356 a          480 c          518 g          270 t
ORIGIN      
        1 agggcgatgt gttctggctt gaagctcgga gcgccatcca gaaacaaggt ggtaatgcga
       61 cgcaacgtct ccgctcgttt ttccgccgag ccatgctgaa cgacgtcttc caactcagga
      121 agcagcgagg cgggaacacc catccgatac ctgcaaagcg ctgtaaaatc ggctgattag
      181 cggctcttta ctcaaattta agggcagatt ctgaaggaag agttagccct cagtctgctg
      241 cctgcccttg cgcgggatcg agaaatcgct atatttcaag cgttactgac accctcataa
      301 ccgatcgggt tttgagagtg ggtcccgcgg gacccgctct tttttgttac cgaatggcta
      361 caggcgacac gttgcaaaca catgcggcct ccagcgccgc gccaagcgaa ccacggctca
      421 tcgtcgagcc ggggctgtcg gcgcgcgtgg cgtcaatcgt cgagccggtg attgagcagc
      481 tcggctatcg actggtgagg gtgcgcgtct ccggagccga aggctgcacc gtgcaaatca
      541 tggcggagcg tccggacggc agtatgacag tcgaggactg cgaggccgtt tcccgcgcgc
      601 tctcgccggt tcttgacgtc gctgacccga tcgaccgggc atatcggctt gagatttcct
      661 cgcccggcat tgaccggccg ctggtgcgca aatccgattt cgaacggtat gctggccacg
      721 tcgtcaggat cgaaacagcg atgccgatcc agggccgcaa gcggtttcgc gggaccctga
      781 tgggtaccga gggcgaagcg gcacgcattc ggcgggacga cgccaccgta ggcgaagaag
      841 cagaaatcct gcttccgatc gaagagatga gcgaagcgaa gctcgtgctg accgaccagc
      901 tggtggctga agctttacgg cgggaaaagt ccgccaagcg cgaagcgcgc gaggcacgga
      961 aggaagttag acgcgaagag agacaatcac ggcatcggcc gcagaggccg gccgtcaaag
     1021 gaggagaatg agctatggct gtaagcgcca accggctcga gctgctgcag atcgcagacg
     1081 ccgttgcccg cgaaaaggcg attgaccgcg gaatcgtgat cgcagcgatg gaagacgcga
     1141 tcgcaaaggc ggcgcgttcg cgctacggcg cagaaaccga cgtgcatgcc gaaattgagc
     1201 cgaagaccgg cgacctgcgt cttactcggc acatgctggt ggtggagagc gtagagaatc
     1261 cgtccaacca gattacactc gaggaagcac gcaagcgtca cccggccgcg caagtcggcg
     1321 acacgattgc cgaccccctg ccgccactcg agtacggccg tattgccgca caatcggcca
     1381 agcaggtgat cgtgcagaag gtgcgtgagg ccgagcgcga cagacaatat gccgaataca
     1441 aggaccgtat cggcgacatc gtcaacggca tcgtcaagcg cgtcgagtac ggcaacgtca
     1501 tcgtcgatct cggccgcggt gaagcgatca tccgccgcga cgagctgatc ccgcgcgaga
     1561 acttcaagta cggcgaccgc gtccgcgcct acgtctacga cgtgcgccgc gagcagcgtg
     1621 gccc
//
LOCUS       DATDHO010000084         2360 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_102592, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000084 DATDHO010000000
VERSION     DATDHO010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102592"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VIY07_01500"
     CDS             <1..400
                     /locus_tag="VIY07_01500"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6380460.1"
                     /translation="LVAVAATARAQDSPLPAGFKTQPLLKSGQTRDKQPIAYPKTDRP
                     EIISVIGVIEPGGRTPLHEHPVPTYVYVLEGEVELQSHGGQPHQYKAGEAYIEALNHQ
                     HQLFNKGNVPAKVLVLFVGEEGKPTTITAK"
     gene            1286..>2360
                     /locus_tag="VIY07_01505"
     CDS             1286..>2360
                     /locus_tag="VIY07_01505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HEY6380461.1"
                     /translation="MRALMTIPLVALCLVAPSSAQTIYPIDRADILAGSLFDFKVEFP
                     ELQTSKSAAVTINGKPYANTFGRDATFIEREDGKDQSAIVLRDVSLRPGTYEVRAGAS
                     SAIWNVYATGSRKAKNVILLIGDGMSPAHRIAARLLSKGIAQGKSLGKLAIDDMPHMA
                     LVATAGSDSIITDSANSASAYASGHKSAVNAMGVYADRTANPFDDPKVEPIAKLAKRR
                     LNMAVGIVTNTEIEDATPAAMATHTRRRASYDQIVEQYFDVKPDVLMGGGLANFLPAN
                     AAGSKRKDDVDYISKFRDAGYRYVTSGTELKAADADEATNKLLGLFNLGNMDGVLDRK
                     FLKGGSVKKFPDQPDLTEQVRTAL"
BASE COUNT          537 a          704 c          632 g          487 t
ORIGIN      
        1 gctcgtggct gtagccgcga cagcgcgcgc ccaggacagt ccactgccgg ccgggttcaa
       61 aacccaaccg ctgctaaaat cgggtcaaac ccgcgacaag cagccgatcg cctatccaaa
      121 gacggacagg ccagagatca tctcggtcat cggagtcatc gagccgggcg gccgcacgcc
      181 actgcatgaa catccggtgc cgacctacgt ctatgtcctc gagggcgagg tggaattgca
      241 gagtcacggc ggacagccgc atcaatacaa agccggcgag gcgtatatcg aggccctcaa
      301 tcaccagcat cagctattca ataagggcaa cgttccggcc aaggtcctcg tgctcttcgt
      361 cggtgaggaa ggcaaaccca caactataac ggcgaaatag ccgtcggtca tggcggcgga
      421 tcgggcgcca ccgtcccgtt agccgttggt gttgtgaagg ttgttcactc tccgcaacaa
      481 cggtcaaaaa cgttcggcct tgcttgttaa gtccgcggct ttagtcgtca tcgggcttct
      541 ctcgcttatc ggcgaccaag cttgatcgcc gaacgcgaca actaagtatt cccccgactt
      601 gccgccctac atcacgacgc cagatgccac gcaattcccc tttggattgg cgaacattta
      661 gactggcaaa tgggatgtcc gctttacccc gaaagcacca gcaccagagc cagcgcattc
      721 tcaaaggcga cagtgcggcc agcctaatca atccatcgga taatggagca gaagggtccg
      781 ttaaactcgt acaccgtgat ctttgtattg ccttcccatt tcgaccccca ttcttttttg
      841 cacgcccggc tgtattcctc gaacccgccc aatagcataa tgagaataaa tattaggacg
      901 atgcaaaaga cgactggatg cttgtcgata tatcttgaaa tcttttgttt cctgaccgcc
      961 atgatgctgg aatgtttatt gagtagcaca agacctaaat tgatcacgca gcttatggct
     1021 cttcagcgga tatactggca gacattgcca aacgacgaat cttacgaacg ctggccgcat
     1081 gcggaggtct agccccggac aacgacgcgc gacgtgcgac gtgtcacact accgatggtc
     1141 catgcggctg gatatccggt tttgagccca gctggtgggt cccaatagcg caccccttgt
     1201 gcacgagctt gcagcttgga cgcgtattca acagaactgt catataactc gcttagtctg
     1261 ctccgatatt ttgcaggaga ggcccatgcg agctttgatg acgatcccgc ttgtcgcgct
     1321 gtgtcttgtc gctccgtcgt cggcgcagac gatctatccc attgaccgcg ccgacattct
     1381 cgcgggttcg ctgttcgact tcaaagtcga gtttcccgaa ttgcaaacct ccaaaagtgc
     1441 agcggtgacc atcaacggca agccctatgc aaacaccttc ggtcgagatg cgacctttat
     1501 cgaacgcgaa gacggcaagg atcaatccgc cattgtgttg cgtgacgtgt cgctcaggcc
     1561 cggcacatac gaagtccgtg ccggtgcgtc atccgctatc tggaacgttt atgcgaccgg
     1621 gtcgcgcaag gccaagaacg tgatcctcct tattggcgat ggcatgtcgc ccgcgcatcg
     1681 tatcgctgcc cgtctccttt cgaagggtat cgcgcagggc aagagcctgg gcaagctcgc
     1741 gattgatgac atgcctcaca tggcgctggt ggcgactgcc ggcagcgatt cgatcatcac
     1801 cgactccgcc aattcagcca gtgcttatgc gagcgggcac aaatcggcgg tgaacgccat
     1861 gggcgtctac gccgaccgca ccgccaatcc gtttgacgat cccaaggtcg agccaatcgc
     1921 aaaactggcc aagcgtcggc tcaatatggc tgtcggcatc gtcaccaata ccgaaattga
     1981 agatgccaca ccggcggcaa tggcgacgca tacgcggcgt cgcgcaagct atgaccagat
     2041 cgtcgagcaa tatttcgacg tcaagcctga cgtgctgatg ggtggcggac tggcgaattt
     2101 tctgcccgcg aatgccgccg gctcaaagcg caaggacgac gtcgattata tcagcaagtt
     2161 ccgcgatgcc ggttatcgct acgtcacgag cggaaccgag ctaaaagcgg ctgatgccga
     2221 cgaagccacg aacaaacttc tgggcctgtt caatctcggc aacatggatg gcgtccttga
     2281 ccgcaagttc ctcaagggtg gctcggtcaa aaaattcccc gatcagccgg acctcacaga
     2341 acaggtgcgg accgcgctca
//
LOCUS       DATDHO010000085         2543 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_152404, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000085 DATDHO010000000
VERSION     DATDHO010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152404"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1027
                     /locus_tag="VIY07_01510"
     CDS             <1..1027
                     /locus_tag="VIY07_01510"
                     /inference="COORDINATES: protein motif:HMM:NF021524.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2254 domain-containing protein"
                     /protein_id="HEY6380462.1"
                     /translation="VLTITMVVVQLAMGQFSPRIVQRILQDKPSQLAIGVFVGTFTHA
                     MLTLREVQTEGEGVVPGVAVVVAFVLVIISIMVLVWYVNHIGRSLRVSALIELVGADT
                     RKLLDTNYADEGASPRFERPTLQAPRSGVVIRVNHSALVRIAEAGNCVLTLRPALGEF
                     VPAGAPVFEIAGAADRINVSAALRSVELGLERTLDQDMAYGVRMLVDIAERSLSDGPF
                     LDPTTAVQAIDRLHDCLRQLAPRPFPDGRHRDKNGEVRLLVPSMTWEDYVHLAFDEIR
                     MAGAGSPQVARRLRAALEDLLTIAPLERKACLQEQLNLLQSGIRDAITEASDCSSSSR
                     RDGKGLG"
     gene            complement(1460..1831)
                     /locus_tag="VIY07_01515"
     CDS             complement(1460..1831)
                     /locus_tag="VIY07_01515"
                     /inference="COORDINATES: protein motif:HMM:TIGR00026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family deazaflavin-dependent
                     oxidoreductase"
                     /protein_id="HEY6380463.1"
                     /translation="MLQVGLGPPHTYLLTVPGRKSLKPYSTPVILVEENGDRWLVAPY
                     GEVGWVKNARAAGQVTLERGRRSETVRIAELSPGEAAPVLKKYLSRVPVVRPFFDVTP
                     KSQIADFVVEAPRHPVFRIVR"
     gene            complement(1970..>2543)
                     /locus_tag="VIY07_01520"
     CDS             complement(1970..>2543)
                     /locus_tag="VIY07_01520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380464.1"
                     /translation="GPQLAPVFGVGAGNTIFDGPGENEDFGFEQTEGDPMLLYTFRTA
                     PLRNLKVAPAFFHNGVFGTLEAAITHHLDVEASLRNYNPDANKVPLDLRRGPFEGILA
                     AGIDPILKDPVRLTKEEFRDLVEFVRDGLFDKRVLKFCKHIPESVPSGMALRFFEGCK
                     YVRNQGMEPESSSVRSASACGFGSHLALTA"
BASE COUNT          548 a          716 c          743 g          536 t
ORIGIN      
        1 cgtattgacg atcaccatgg tcgtcgtgca actcgccatg ggtcagttct ctccacgaat
       61 cgttcagcgc atcctgcagg acaagcccag tcagctcgcg attggagttt ttgtcggcac
      121 tttcactcac gcaatgctca cgctgcgtga ggtgcagacc gaaggggagg gggtggtgcc
      181 cggcgtcgcc gtcgttgtcg cgttcgtgct ggttatcatc agcatcatgg tgctcgtttg
      241 gtatgtcaac catatcggac gctcgctgcg ggtatcggcg ctgatcgagc tcgttggcgc
      301 ggatacacgc aagctgctcg ataccaacta tgcagatgag ggcgcgagcc cgcgatttga
      361 gcgaccgaca cttcaagcgc cacgctcagg ggttgtcatt cgagtaaatc attcagcgct
      421 ggtgcgcatt gcagaagcgg gcaattgcgt gctgacgctt cgaccggcat tgggtgagtt
      481 cgtcccggca ggtgctccgg tgttcgagat agccggcgcg gccgaccgga tcaacgtgag
      541 cgccgcgcta cgctcagtcg aacttggcct agagcgcact ctcgatcagg acatggccta
      601 tggggtgcgc atgctcgtgg acattgctga gcggtcgctc tccgacggac ccttcctgga
      661 tccgacgacg gcggtccagg cgatcgaccg cctgcacgat tgcctgcggc aattggcgcc
      721 acgcccgttt cccgatggtc gacatcggga caagaatggc gaggtgcgcc tgctggtgcc
      781 ttcgatgacc tgggaggact acgtccacct tgcgttcgat gagatacgca tggcaggtgc
      841 aggatcaccg caagtcgcgc gtcgcttgcg cgcggcactg gaggacttgc tgacgatcgc
      901 tccgctcgag cgcaaagctt gcctgcaaga gcagctcaat ctattgcagt ccggcattcg
      961 agatgcgatt actgaggcga gcgattgcag tagctcctcg agacgcgatg gcaaaggact
     1021 cggttgacgc ccgattgtcg cgcaagccga tgacccaccc ggaattacga tcactgcctg
     1081 cgctcggaag tcgttttcaa cattgtgtcc gtagggtggc catggcgaga gtagaagtga
     1141 aactcttctt ataccttgat ccaagaaaac acggctaaaa aatacagcct gagcgtgact
     1201 acaccgtctt acactttcct cgttttcggt ctgtggcacg gctacacatc gtaagttttc
     1261 gcagaattga taaccgcagg ccgtcaaaat tcatccctgg cagacatatg cgatcagcca
     1321 gtagtatggc atgggagcca tggcggggct gagttcagtt ggacgagccc gcagcgcaag
     1381 cccagcagat aaatgaaggg ccgctgcggg ttctgtaaaa gagctgcctg ccaggaagcg
     1441 cagcttcaga ccaaagacgt tagcgcacta tgcggaacac gggatgtctc ggcgcttcga
     1501 caacaaaatc tgcaatttgc gatttaggtg tcacgtcaaa aaacggccgt acgaccggca
     1561 cccgggaaag atattttttt agcaccgggg cggcctcgcc cggcgaaagc tcagcaatgc
     1621 gcaccgtctc agatctccgg ccgcgctcaa gtgtaacctg ccccgccgcg cgagcgtttt
     1681 tgacccaacc cacttcgccg tagggagcga caagccagcg gtcgccgttt tcttccacca
     1741 gtatcacggg tgtcgagtac ggttttaggc tttttcttcc gggaaccgtc aagagatagg
     1801 tatgcggagg acccaagccg acctgcagca aagcgcgtat gattcggttg accgatctgc
     1861 gccaaaagcc tagacggtat gggcgagcca taatatgcct gttcgattca atcgattctg
     1921 aacagtctaa ttggctcaag gattgatcaa aggaaatcag ttagttcaat tacgcggtta
     1981 acgccagatg tgagccgaac ccgcaagcgg aagcgctgcg gacgctggaa gactcgggct
     2041 ccatgccttg gttacgcaca tacttacacc cctcgaagaa ccgaagcgcc atgccgctcg
     2101 gcaccgattc cgggatgtgc ttgcaaaact taaggacacg tttatcgaac aggccgtcgc
     2161 gcacgaactc gaccaagtcg cggaactctt ccttggtaag ccggaccgga tcttttaaga
     2221 tcggatcgat gccggcagcg aggattcctt cgaacgggcc gcgcctgagg tcaagcggca
     2281 ctttgttggc gtcgggatta tagtttcgca acgaggcctc gacatcaagg tgatgcgtga
     2341 tcgcggcctc tagtgtaccg aataccccat tgtgaaaaaa ggccggcgct acctttaggt
     2401 tacgcaacgg cgcggtgcgg aaagtatata gtaacatggg atccccttcg gtctgctcaa
     2461 agccgaaatc ttcgttctca cctgggccat cgaaaattgt gttcccggct ccaacgccga
     2521 acaccggtgc aagctggggt ccg
//
LOCUS       DATDHO010000086         1891 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_3632, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000086 DATDHO010000000
VERSION     DATDHO010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1891)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1891)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1891
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3632"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            12..1490
                     /locus_tag="VIY07_01525"
     CDS             12..1490
                     /locus_tag="VIY07_01525"
                     /inference="COORDINATES: protein motif:HMM:NF013444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380465.1"
                     /translation="MLTGARPVYMVPTRNRYGIIGPLAPSEMDPKTIRKKAQAGTLTK
                     QVADQKPVYAVVTNSTYDGLCYNAVRVQAILEKSCDRIHFDEAWYGYARFNPMYQNHF
                     AMRGDPAAHVGPTVFATHSTHKLLAALSQAAYIHVRDGKGAIDHHRFNQAYMMHTTTS
                     PLYAIVASNDIATAMMDGGSGHSLTQEVIEEAVDFRQVVGRLWRTFSDKKDWFFKPWN
                     VETVKNPANRRNVAFEDAPAELLCQSQEPWMLHPGDKWHGFDDIAEDWCMLDPVKVSL
                     LSPGMGEDGKLEKSGVPAALVNAWFNRFGIVPTRVTDFQVMFLFSMGITKGKWGTLLT
                     NLLAFKRAYDSNRQLSEVLPEIAAQYPDRYRNVGLHDLGDELFEYLRQNRPGDLLNAA
                     YEGLPNADMTPREAYARLVAGDVESVSVDKLANRTAANAIMPYPPGIPMLMSGENFGG
                     AESPQIGYLRGMQNREQQFPGFAGVIEGAELHDGSYHVLCVK"
     gene            1503..>1891
                     /locus_tag="VIY07_01530"
     CDS             1503..>1891
                     /locus_tag="VIY07_01530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011652400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEY6380466.1"
                     /translation="MDFSVIDLALVTKLLLLLLIGMGPKIALVPFLEKTKNFDAETQR
                     AIGRRMVLIALITALVMFALGGLLLRLLHITSGAVAVAGGIILAFLAINMVVGHGEKA
                     VEETPAVQGDPTEIAIYPLAVPYLLNPV"
BASE COUNT          408 a          539 c          561 g          383 t
ORIGIN      
        1 agcaaggcct aatgcttacc ggagcgcgac cagtctacat ggtgccgacg cgaaatcgct
       61 acggcatcat aggaccgtta gcgccctccg agatggatcc gaagacgatt cgcaaaaagg
      121 cacaggcagg cacccttacc aaacaggtcg ccgaccagaa accggtgtac gcggtcgtca
      181 ccaacagcac gtatgatgga ctttgctaca acgctgtacg cgtgcaggcg atcctcgaga
      241 aatcctgcga tcggattcac ttcgatgaag cctggtacgg ctacgcgcgg ttcaatccga
      301 tgtaccagaa ccactttgcc atgcggggag atccggcggc gcacgtaggg cctacggtct
      361 tcgccacgca ttccacgcac aagctgctcg cggcactgtc gcaggccgcc tacattcatg
      421 tgcgtgatgg caagggtgcg atcgaccatc atcgctttaa tcaggcgtac atgatgcaca
      481 cgacgacatc gcctctctac gcgatcgttg cctcgaatga catcgcaacg gcgatgatgg
      541 acggcggtag cggccactcc ttgacccaag aagtgattga ggaagcggtc gacttccggc
      601 aggtcgtggg ccggctgtgg cgcacgtttt ccgacaagaa ggattggttc tttaagccat
      661 ggaacgtcga gacggtgaag aaccctgcca atcgccgcaa cgtggcgttc gaagacgccc
      721 cagcggaatt gctctgtcag agccaggagc cgtggatgct acatcccggc gacaaatggc
      781 acgggttcga cgacatcgcc gaagattggt gtatgcttga tccggtcaag gtgagcctcc
      841 tctcaccagg aatgggcgag gacggtaagc tcgagaagag cggagttccg gcggcgctgg
      901 taaacgcgtg gttcaaccgc ttcgggatag tgccgacgcg ggtcaccgat ttccaggtga
      961 tgttcctgtt ttcaatgggc attactaagg gaaagtgggg tacgttgctc accaacctac
     1021 tggcctttaa acgggcctac gattcaaacc gtcagctctc tgaggtcctt ccagaaatcg
     1081 cggcgcaata tccagatcga taccgcaacg ttgggttgca cgaccttggc gatgaattgt
     1141 tcgagtacct acgccaaaac cgcccgggcg acctgttgaa cgccgcctac gaggggctac
     1201 cgaacgctga tatgacgcca cgcgaggctt acgcgagact ggtcgctggc gacgtagagt
     1261 ccgtgtcagt agacaagctc gcaaatcgca ctgcagcgaa cgcgataatg ccttacccac
     1321 caggcatccc gatgctgatg tcgggcgaaa atttcggcgg tgccgagtcg ccgcagatcg
     1381 ggtatctacg tggtatgcag aaccgcgagc agcagtttcc cggctttgcg ggagtgatcg
     1441 aaggcgccga gctgcacgac gggagctatc acgtcctgtg cgtcaaatag cgatgtgaca
     1501 caatggattt ctcggtcatc gatctcgcac tggtgactaa gcttcttctg ctcctgctca
     1561 tcggcatggg tccgaagatt gcgcttgtgc cgttcctcga gaaaaccaag aactttgacg
     1621 cggagacgca gcgggccata ggccggcgga tggttctcat agcgttgatt accgcgttgg
     1681 ttatgtttgc gcttggtggg ctcttgctgc ggctccttca catcactagc ggcgccgttg
     1741 cagttgccgg cgggatcatc ctcgctttcc tggccatcaa catggtcgtc ggacatgggg
     1801 agaaggccgt cgaggagaca cccgcggtcc agggcgatcc aaccgaaata gcgatctatc
     1861 ccctggcggt accgtatctt ctcaacccgg t
//
LOCUS       DATDHO010000087         4240 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_251290, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000087 DATDHO010000000
VERSION     DATDHO010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4240
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251290"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            455..2197
                     /locus_tag="VIY07_01535"
     CDS             455..2197
                     /locus_tag="VIY07_01535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin domain-containing protein"
                     /protein_id="HEY6380467.1"
                     /translation="MSPIPKTAPFAEEEIDLLNRVVGTASPVQRAWLAGFLAGLDASG
                     AAVLPHPAAPARPAEPLTIIYASESGNSEKLAGDLAKAARKNGLKPTVIDMADLELSA
                     LASAKRLVMIAATWGEGEPPARAVRAYNELMGEGAPRLEGVEFGVLALGDTAYAEFCA
                     IGRKIDERLAALGGKRVVDRVDCDLDFTEPAARWIGDAVKVLTPPNAGGRVIEVDFGA
                     KAGASASTDIVEAEIIEHVDLNSSRSDKETIHLALSFEGGAPAYEPGDSLDLYAENDP
                     TYVDELLKIAGLANDEKLRADFIKSRDVTTLSLKTIETYAASTGHQYVKALLADGQAK
                     EWIAGRQLIDLIATFPISIDAEKLRALTRPLAPRAYSIASSRREIGDEAHLLISAVRY
                     DSHGRARKGVASNYVAERLKRGQHVRVKLKPNRHFALPAPDKDIIMVGPGTGVAPFRA
                     FVQERRATKSSGRSWLFFGDRTFTHDFLYQLDWQDALKDGALTRMDVAFSRDTPEKVY
                     VQNKLWQRRADLIQWLDGGAYFYVCGDAKAMAKDVRAALVRAYADVKTLSPEAAEKAV
                     TTLEREKRYLQDTY"
     gene            2231..3925
                     /locus_tag="VIY07_01540"
                     /pseudo
     CDS             2231..3925
                     /locus_tag="VIY07_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093188.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     hemoprotein subunit"
BASE COUNT          853 a         1287 c         1326 g          774 t
ORIGIN      
        1 tacccgatgc tctgccgggg tcagcaacgc atgcagcctg cgtcgatagg tggccatcaa
       61 taagcggaag attcgggagt gagcctcact tgcgctgttt tgcatacgtc ttggcgggat
      121 tcgagcgtta gcggcgttct ccacaaggtt tggggcaaag gaaatccttt cactcattag
      181 acctcatctc agcaaaaatc ttcttatttt ccagcactta ttgccgtttt gcagaataat
      241 ctcctactaa ttgagtactg ctggtgagat catggagtcg gcatcgatgc gcaatgtcac
      301 gcacaagcct gagcaaattt cgggactcga aacctgggcc ttcgcgctgg cgaccgcgtt
      361 ggtcgcgctg attgtcatcg gcatcttgcc gcacatgcat tggtaaaggc ccatacggcg
      421 gcgctcagcg tgccgccggg aaatgagaag aagaatgtcg ccaattccga agactgcgcc
      481 cttcgccgaa gaggagatcg atctcctcaa ccgcgtggtc ggcaccgcaa gcccggtgca
      541 gcgcgcctgg cttgccggat tcctggcggg ccttgatgcc tcgggtgctg ccgtcctgcc
      601 gcatccggcc gcgccggcgc gtccggccga gccgctgacg atcatctatg caagcgaatc
      661 cggaaattcc gaaaagctcg ccggcgacct cgccaaggcc gcgcgcaaga acgggttgaa
      721 gccgaccgtt atcgatatgg ccgacctgga gctgtcggcg ctcgcgtccg cgaagcgcct
      781 ggtgatgatt gccgccacct ggggcgaagg cgagccgccc gcgcgcgcgg tacgagctta
      841 caacgagctg atgggcgagg gggcgccgcg tctcgagggc gtcgaattcg gcgtacttgc
      901 gctcggcgac acagcctatg cggaattctg cgcgatcggc cggaaaatcg atgaacggct
      961 cgctgcgctc ggcggcaagc gcgtcgtcga tcgcgtcgac tgcgacctcg acttcaccga
     1021 gccggccgcg cgctggatcg gcgacgctgt gaaagtcctg actccgccca atgccggcgg
     1081 acgggtgatc gaagtcgatt tcggcgccaa ggcgggtgcc tcggcgagca ccgatatcgt
     1141 cgaggccgag atcatcgagc atgtggatct gaattcctcg cgatccgaca aggagacgat
     1201 ccatcttgcg ctcagcttcg aaggcggcgc cccggcttat gagcccggcg actcgctcga
     1261 tctctatgcc gagaacgacc ccacctatgt cgatgagctg ctgaagatcg ccggcctggc
     1321 aaacgacgaa aaattgcgcg ccgacttcat caagtcgcgc gatgtgacga ccctgtcgct
     1381 caagacaatc gagacttatg ccgcatccac gggccaccag tacgtcaagg cgctgctcgc
     1441 cgacggccag gccaaggaat ggatcgccgg gcgtcagctt atcgatttga tcgcgacgtt
     1501 cccgatttcg atcgatgccg aaaagttgcg tgctctgacg cgcccgctcg cgccgcgcgc
     1561 ctattccatt gcctcgtcgc gccgcgagat aggagacgag gcgcatctgc tcatttccgc
     1621 tgttcgctac gacagccacg gccgcgcgcg aaagggcgtc gcctcgaatt acgtcgcgga
     1681 gcggctgaag cgtggccagc atgtacgggt caagctcaag cccaacaggc actttgcgct
     1741 gccggcgccg gacaaagaca tcatcatggt cggtccgggc acgggtgtgg cgccgttccg
     1801 tgccttcgtg caggaacgcc gcgcaaccaa gtcatccggg cgcagctggc tgttcttcgg
     1861 cgaccgcacc ttcacccacg acttcctgta tcagctcgat tggcaggacg cgcttaaaga
     1921 cggcgcgctg acgcgcatgg atgttgcgtt ctcgcgcgat acgccggaga aggtgtacgt
     1981 ccagaacaag ctctggcagc ggcgcgcgga cctgatccag tggctggatg gcggcgcgta
     2041 tttctatgtc tgcggggacg ccaaggcgat ggcgaaagac gtccgcgccg cgctggtgcg
     2101 cgcctacgcc gatgtgaaga cgctgtcgcc ggaagccgcc gaaaaggcgg tgacaactct
     2161 cgagcgcgaa aagcgttact tgcaggatac gtattgatcc tgcttcgatt ggcctgccat
     2221 gaccgatgaa ctgtcgcgca acgagcgcat caaggaagca agcgactacc tgcgcggtac
     2281 gctggccgag ggcctgcgcg aggaaatcac cggcgcgatc atcgaggacg acgcgcagct
     2341 ggtgaaattc cacggcatgt atttgcagga cgaccgcgac ctgcgagccg agcgcacgcg
     2401 aaagaagatg gagaaggcgt tcgctttcat gatccgcgtg cgcattccgg gaggcgtgct
     2461 gacgccgaaa cagtggctgg cgctcgatga agtcgcccgc ctgtacggca atggcacaat
     2521 gcggctgacg acgcggcaga ccgtgcagct tcacggcgtg atcaagtcga atctgaaagc
     2581 gacgctgaag gcaattgaca gcgtgctgct caattcgatc gcggcttgcg gcgatatcaa
     2641 tcgcaatgtc atgtgcaacg ttcttcccga acagtcgcgc gcgcatgccg gggcgctcga
     2701 ggttgcgcgt gcgatctcgg atcatctcct gccgcgcacg ccggcctatc gcgagatatg
     2761 gctcgacggc gagcgcatcg ccggtggcga agaagaggtc atcgagccga tctacggcaa
     2821 gacctatctg ccgcgcaaat tcaagatcgt ggttgctgtg ccgccatcga acgacgtcga
     2881 catatttgca cacgaccttg gatacatcgc aatcgaggac gaggccggga atatcgcggg
     2941 ctggaacgtg actgtcggcg gcggtatggg catgacccat ggcgaggagg atacctatcc
     3001 gcgcactgcc gacgtcatgg gcttttgcgc gaccgcagac accgtcaaga tcgccgaggc
     3061 cgtcgtcacc gtgcagcgtg actggggcga tcgcaagaat cgcaagcacg cgcggttgaa
     3121 atacaccatc gaggaccgtg gtctcgacgc gtttcggtca gaggtcgagc ggcgcgccgg
     3181 cgtcaagctt gatccggctc gaccttttac attcacctcg accggggacc gctatggctg
     3241 gagcgaggcg accgagggcc gcgggcatct gacgctgttc gtgcaaaacg gtcgcgttcg
     3301 ggacgtcgca gatgccgcac agcagactgc gctgcgcacg atcgcacaat ttaacgaagg
     3361 cgagttcagg atcacgccga accagaacct cgtcatcgca aacgtgccga caagccagca
     3421 aactcagata gaacgcatcg cgcgcgaggc aaggctgctc gcaccatggt ccggattgcg
     3481 tcgaaattcg atggcgtgcg tggcgctgcc aacttgcggt ctcgcgcttg cagagagcga
     3541 gcgttacctg cccgacttgc tgaacgatct tgatcagcgg cttgcggccc tgggcctgtc
     3601 cgccgacgac atcgtcattc gcatgaccgg ctgcccaaac ggttgcgcgc ggccgtatct
     3661 cgccgagatc ggattggtcg gcaaaggacc gggtcgctac aacctatata tcggcgccgc
     3721 cttcgacggt tcacgcctca acaagctcta tgccgaagac cttgatcatg ccggcatcat
     3781 cgcggcgctc gagccgctgt ttgcggccta tgcggctgag cggcaaaaag gcgagcggtt
     3841 cggcgatttc gtcatccgca acgggtttgt cgcggccagc ggcaacggcc gcgagttcca
     3901 cgccaatacc gggaagcgca agtgaccatc aaacgcaccg acctaaaatc tggtcatttg
     3961 ccgaaaattg aggcggcccc gcgcgtttaa ctcctggaaa aacagcggtt ttttcagcca
     4021 gtccgactgg aatgggtctt gcttgaagca ggccaggaaa aggcattgcc ccagaaaatc
     4081 cgaatgtcgg caaggacaaa aaatttggtt gcgacgcgta aaggctcgga ttccgccggc
     4141 cctgctcagt caggggacca tcgtgactcg gccctcaaga tcgccattgt cgacgaaagt
     4201 ccggtacgcg ccgccattct cgaagacggc ttgcgcgagg
//
LOCUS       DATDHO010000088         4533 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_399934, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000088 DATDHO010000000
VERSION     DATDHO010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4533
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_399934"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..335
                     /locus_tag="VIY07_01545"
     CDS             <1..335
                     /locus_tag="VIY07_01545"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY6380468.1"
                     /translation="VDPNDPYGRIMAGLFASHDLHYEVTIRARFGSTVCALVSHGLGI
                     AIVDEFTLAADQWPRVRALDISEPTMFQTFVAHRKDVSLSSHAARFVAALRSEMDAVT
                     RQRSPRKK"
     gene            500..1624
                     /locus_tag="VIY07_01550"
     CDS             500..1624
                     /locus_tag="VIY07_01550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380469.1"
                     /translation="MASCILAGVGLASPVLAQSTVYIPAILELSGAGAVSGTNFRDGM
                     LMAIDEINAKGGILGKKIDTPLLDTQSDAGISRAQVQKVLDNKPFVIIGPVFSGSVLV
                     DMLLTQQAEIPEIVGGEAAAITQKGNPYVFRTSFGQQFSMPKIANYMRDGIKAKTVGV
                     LWVNNDFGKGGRDNFNKEMNARDIKVVADISTESGQADFSADVVKLKGANADAVFVYL
                     NEEESARFLREARKQGLNKPLIGETTLLGQKVIDLAGGAANGVRGHVGLTIDAPIPAV
                     QEFAERFKKRYNYACDHNGIKGYTGVYFIKHVTEKIGKFDSKAFAEAAHGITISPKDE
                     PGILMEATWDKNGDVDRISFLGEVIDGKQKIVETLPKLGK"
     gene            1688..2563
                     /locus_tag="VIY07_01555"
     CDS             1688..2563
                     /locus_tag="VIY07_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380470.1"
                     /translation="MASFIQLLVSGLATGAIYALIAVGFTLLWQTSQTINFAQGEFVM
                     LPAFFVLAAMNAGAPFWLAALIGIALSIVILGLLFKVVIVDPMLKYGVLPLVISTIAL
                     SLFLKESAKDFYSSQAQPFPALVPPTDVHIFEAVISTQSLVVLAIAILTVVALNLLLN
                     KTRVGRQMQATAQNPTLARILGIPVRQMVLYTFLLNAVLVAIASILVSPIYLAKFTNG
                     ETLGMAAFIAAIIGGFNQVRGAILGGVILGVLDNLSAAYISSQYRGAFPLIILIIVIL
                     FRPQGLMGRLEERTV"
     gene            2560..3540
                     /locus_tag="VIY07_01560"
     CDS             2560..3540
                     /locus_tag="VIY07_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014762888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380471.1"
                     /translation="MTRMGAIIVGLAAIAAIAAPFFLKPFGIFLISTWVVFTIAAIGL
                     NLTLGYAGQISLAQGAFVGIGAYTVALLTPLGVPFFIAFFAAGLLCFAVGWLLGYPAL
                     RVQHHYLAFVTLAFTTLVFLVLRNEEWLTNGIYGITGTPRPTLLGWKTTAARDFYFLC
                     LGVLALLSFAIWWMLRSPWGRAFVALRENPIRALSLGLDTRRYTLMAFAIGSSLGGLS
                     GALHAPLVQFIEPNSFALGLSFNLLLMVIVGGSGYFFGPFVGALIAVLLPEWLRITQG
                     YYLLLYAAAIMVMMAFCPSGVLGLVERARIALVGRRKEPATSTLAEGAGP"
     gene            3537..4280
                     /locus_tag="VIY07_01565"
     CDS             3537..4280
                     /locus_tag="VIY07_01565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380472.1"
                     /translation="MTSVLAVSNLRKTFGGITAVDGVSFEVRDGEILGIIGPNGSGKS
                     TLFNCVLGQLRPTTGEIRIDGTPTTGMRPCDLNRLGVSRTFQLLQVFPQLSVRDNLIL
                     AGQEHQGSMASRLFGRSDAGLGGAAEKMIEFFRLSHLADEQAGSLSYGQQKLLDAAMA
                     FMAGPRLVLLDEPAGGVNLTMLGNLRERLQAYHAERKATFVVIEHQMEFVMALCTRVL
                     VLAEGRIIAEGAPHDIRRNPLVIEAYLGH"
     gene            4282..>4533
                     /locus_tag="VIY07_01570"
     CDS             4282..>4533
                     /locus_tag="VIY07_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6380473.1"
                     /translation="MNSEALLVLDNVFAGYGKMTILNGTTARVRRAAITTVIGPNGAG
                     KSTMFKTIFGLLPVRSGTISFDGSNTTNFTPRQVLDAGIA"
BASE COUNT          831 a         1367 c         1327 g         1008 t
ORIGIN      
        1 gcgtagaccc gaacgaccct tatgggcgga tcatggctgg gctgtttgcc agtcacgacc
       61 tgcattacga agtgacgatc cgcgcccgtt ttggatcgac agtttgcgcc ctggtgtcgc
      121 atgggctcgg cattgccatt gtcgacgagt tcaccctggc tgccgaccag tggccgcgag
      181 tgcgggccct cgacatctcc gaaccgacca tgttccagac ttttgtcgcc caccgcaagg
      241 atgtctccct gtcgagccat gccgcgcgtt tcgtcgcggc gttgcgcagt gaaatggatg
      301 ccgtgacgcg gcagcgtagc cctcgcaaaa aataacaaca tgttaagttt ggtgtacgtc
      361 ttggttattg accttgcgcc gcatgatcag caaggtcggc ttcggcaaaa caggctcggt
      421 ggggccgttg ccccccagaa gcccgaataa cgggccgatt aggcaaagga gggagcttcc
      481 tatgtttcgt tcaggactaa ttgcatcttg cattcttgcg ggtgtgggct tggccagccc
      541 cgttctcgcg caatcgaccg tctacattcc ggccatcctc gaactgtctg gcgccggagc
      601 ggtatcagga accaacttcc gcgacggcat gctgatggct atcgacgaga tcaatgcaaa
      661 gggcggcatc ctggggaaaa agatcgatac acccttgctc gatacgcaga gcgatgccgg
      721 catctctcgc gcgcaagtgc agaaggtgct cgacaacaaa cccttcgtca ttatcggtcc
      781 tgtcttctct ggttctgtcc tcgtcgacat gctgctgacc cagcaggcag aaatccccga
      841 aattgtgggc ggtgaagctg cggcaatcac gcagaagggc aatccttacg ttttccggac
      901 ctcattcggg cagcagttca gcatgccgaa gatcgccaac tacatgcgcg acggcatcaa
      961 ggccaagacc gtcggcgttc tgtgggtgaa caacgacttc ggcaagggag gtcgcgacaa
     1021 cttcaacaag gagatgaatg cccgcgacat caaggttgtc gccgacattt ccaccgagtc
     1081 cggccaggcg gacttttccg ccgacgtcgt caagctcaag ggtgccaatg ccgatgccgt
     1141 cttcgtgtac ctcaacgaag aagagagcgc gcgcttcctg cgcgaagcga ggaagcaggg
     1201 tcttaacaag cctctgatcg gcgagaccac tttgctcggc cagaaggtga tcgatcttgc
     1261 cggcggcgcg gccaatggcg tgcgcggcca cgtaggcctc actatcgatg cgccgatccc
     1321 ggccgtgcag gaattcgcag agcgattcaa gaagcgatac aactacgctt gcgatcacaa
     1381 cggcatcaaa ggctataccg gcgtctactt catcaagcac gtcaccgaaa agatcggcaa
     1441 attcgacagc aaggcctttg ccgaagccgc gcacggcatc accatttcgc cgaaggacga
     1501 accgggcatc ctgatggagg ccacctggga caagaacggc gacgtcgacc gcatcagctt
     1561 ccttggcgag gtcatcgacg gcaagcagaa gatcgtcgaa accttgccga agctcggcaa
     1621 gtaatcacgt cacagagttt cttccgcctg gtcaacgcga ccgggcggaa gtcaaaggcc
     1681 ctcggcaatg gcctccttta ttcagttgct ggtatccggc ctcgcgaccg gcgcgattta
     1741 cgcgctgatt gccgtgggat tcacgctgct ctggcagacc tcccagacga tcaatttcgc
     1801 ccagggcgag ttcgtcatgc tgcctgcctt tttcgtcctg gccgcgatga atgccggcgc
     1861 gccgttctgg ctggcggcgc tgatcggaat tgcgctgtcg atcgtcatcc tcggactcct
     1921 gttcaaggtc gtcatcgtcg atccgatgct gaaatacggg gtgctgccgt tggtcatttc
     1981 aaccatcgcg ctgtcactct tcctcaagga aagcgccaag gacttttaca gctcgcaggc
     2041 gcaaccgttt cccgcgcttg tgccgccgac cgatgttcat attttcgagg ccgttatctc
     2101 gacccagagc ctggtcgtgc tggcgatcgc catcctcacc gtggttgctt tgaacctcct
     2161 gctcaacaag acgcgggtcg gacgccaaat gcaggcaacc gcgcagaatc cgaccttggc
     2221 gcgcattctg ggcattcctg tacgacagat ggtgctctac acgtttctgc tgaatgcagt
     2281 gcttgttgcc atcgcgtcga tcctggtgag cccgatctac ctcgctaaat tcactaatgg
     2341 tgagacgctc ggcatggccg cgttcattgc cgcgatcatc ggcggattca atcaggtccg
     2401 cggcgccatc ctcggcggcg ttattcttgg cgtgctcgat aacctgtcgg ccgcctacat
     2461 ctcttcgcaa tatcgaggcg cctttccgct gatcattctc attatcgtca tcctgtttcg
     2521 acctcagggt ctgatgggtc ggctcgagga gcgcacggta tgacgcgcat gggcgccata
     2581 attgttggcc tcgctgcgat cgctgcaatc gcggcgccgt tctttctcaa gccgtttggc
     2641 attttcctga tttcgacctg ggtggtgttc acgattgcgg ccatcggcct gaacttgacg
     2701 cttggctacg ccgggcagat ttcgctggcg cagggcgcgt tcgtcggaat aggcgcctat
     2761 acggttgcac tgctgacgcc cttgggcgtg ccgttcttca ttgcattttt tgcggcgggc
     2821 ctgctgtgct ttgccgtcgg ttggcttctc ggctatccgg cgctccgcgt gcagcaccat
     2881 tacctggcct ttgtcacact ggctttcacg acgctcgtgt ttcttgtgct gcgcaacgag
     2941 gaatggctga ccaacggcat ttatggaatt accggaaccc cacgtccaac gctgctcgga
     3001 tggaaaacca ctgcggcgcg cgatttctat ttcctgtgtc tcggcgttct tgccctgctt
     3061 tcgtttgcga tctggtggat gcttcgctcg ccctggggcc gggcctttgt agccctgcgc
     3121 gaaaatccga tccgcgcgct gtcgctcggc ctggacacac gacgatatac cttgatggca
     3181 tttgccatcg gttcgagcct gggcggcctt tcgggcgcgc tgcacgctcc gctggtccaa
     3241 ttcatcgagc cgaactcatt tgcgcttggc ctgtcattca acctgctgct gatggtgatc
     3301 gtcggcggca gcggctattt cttcgggccg tttgtgggcg cgctgatcgc ggtgctgctt
     3361 ccggaatggc ttcgcatcac gcagggttat tacctcctcc tgtatgcagc ggcgatcatg
     3421 gtcatgatgg cgttctgccc atccggggtg cttggccttg ttgagcgcgc gcgcatcgca
     3481 ttggtgggcc ggcgcaagga gcctgcgaca tcaacgcttg cggaaggcgc cggaccatga
     3541 cttcggtgct tgcagtctcg aatcttcgca agactttcgg cggcatcacc gccgtcgacg
     3601 gcgtgtcgtt cgaggtccgt gacggggaaa tcctcgggat tatcgggccg aacggatctg
     3661 gaaagtccac gctgttcaac tgcgttctcg gccagttgcg gccgaccacg ggcgaaatcc
     3721 ggatcgacgg cacgcccacg accggaatgc ggccctgcga tctcaatcgt ctcggcgtaa
     3781 gccggacatt tcaactactg caggtcttcc ctcagctttc ggtacgcgac aatctcattc
     3841 ttgccggcca ggaacatcaa ggctcgatgg cgtcgcgcct gttcggacga tcggatgcag
     3901 ggctcggtgg cgctgccgaa aagatgatcg agttctttcg cctgtcgcat ctcgcggatg
     3961 aacaggccgg ctcgctgagc tacgggcagc aaaagctgct cgatgccgcc atggccttca
     4021 tggccgggcc acgccttgtc ctgctcgatg agccggcggg gggcgtgaac ctcaccatgc
     4081 tcggaaacct gcgcgagagg cttcaggcct atcacgccga gcgcaaggcg acgtttgtcg
     4141 tcatcgagca ccagatggaa ttcgtcatgg ccttgtgcac acgtgtgctc gtcctggcgg
     4201 aaggacgcat tattgccgaa ggcgcgccac atgacatacg gcgcaatccg ctggtcatcg
     4261 aggcctatct gggacactga aatgaattcg gaagcgttgc ttgtcctcga caacgtcttc
     4321 gccggttacg gcaagatgac gatcctgaac gggacaaccg cgcgcgttcg ccgggctgcg
     4381 atcacgaccg tgatcggtcc caacggggcc ggcaagtcga caatgttcaa gactattttc
     4441 ggactgttgc cggtgcgtag tggaacgatc tcgtttgatg gcagtaacac gacgaatttc
     4501 acgccccgac aggtccttga cgccggcatc gcc
//
LOCUS       DATDHO010000089         4673 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_251327, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000089 DATDHO010000000
VERSION     DATDHO010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4673)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4673)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4673
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251327"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VIY07_01575"
     CDS             complement(<1..204)
                     /locus_tag="VIY07_01575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6380474.1"
                     /translation="MTQRVLRICLPVFVLGLVIILWDLVVRGFAIPPFVLPGPGLVLA
                     TLISDAGLLWHSLLVTLTLTFEGF"
     gene            complement(201..983)
                     /locus_tag="VIY07_01580"
     CDS             complement(201..983)
                     /locus_tag="VIY07_01580"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380475.1"
                     /translation="MSALPPNDNSPGNSPIVTLRGVEKNFSNGIRALDGLDLDVQTGE
                     FVSLLGPSGCGKSTALRIIAGLSGPSAGIVEWPSGAAQIGFVFQEPTLMPWADVSANV
                     GLPFRLAGKDDGGEVVQALERVGLAGFSRSYPRELSGGMKMRVSIARALVTRPQLLLM
                     DEPFAALDEITRFKLNNDLLAVWQDLRRTVIFVTHSVFESVYLSQRIVVMTPRPGRVF
                     TEIVIDAPYPRDERFRTSSEYAAFCRQVAEALAQAMASGAAS"
     gene            complement(1065..2057)
                     /locus_tag="VIY07_01585"
     CDS             complement(1065..2057)
                     /locus_tag="VIY07_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380476.1"
                     /translation="MTRFSFVLLGFLALSAGGAGALDQVRFGTNWVAEAEHGGFYQAL
                     ADGTYKKYGLDVVIVPGGPNTNNRILLPVGRLDFYMSANSLQSFDAVENNIPTVAVAA
                     SFQKDPQVFVAHPGVTKLDDLKTRTLFISKEGMTTYFQWLKSELGFNESKVKPYTFNP
                     QPFLADKNSAMQGYVTSEPFAIERQGGFKPVVFLLADYGFDAYSTLIETRRDLVEKRP
                     DVVQRFVDASAIGWYNYIYGDSHPGNDLIKKMNPEMTDALLAYSIARMKEHGIVDSGD
                     SLKLGIGAMTDAKWKSFFDKMVRAGVVKAGTDYKRAYTLQFVNKNVGAELRPKK"
     gene            2194..2418
                     /locus_tag="VIY07_01590"
     CDS             2194..2418
                     /locus_tag="VIY07_01590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380477.1"
                     /translation="MTKSKITAATLAALTLAGSLAITSGTAQAHSRWGTGVGIGFAAG
                     ALIGAAAVSNAYATPVYVAPSCRLVERYDR"
     gene            complement(2549..3913)
                     /locus_tag="VIY07_01595"
     CDS             complement(2549..3913)
                     /locus_tag="VIY07_01595"
                     /inference="COORDINATES: protein motif:HMM:NF016830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HEY6380478.1"
                     /translation="MNLDRLLFLRAIVALCAVGCGGPLWAQNGTDDSGITEPSIATSL
                     PYHGDPSGTRKWLYDRGVSYNLIYTNDVLGNMSGGLRRGVIDQGKLEAQLLIDLEKLA
                     GWKDWTFYANAFGIYNSGRIRRDYVGGMNTIAAIEADPTVRLSELWLERWVGPVSFRF
                     GQLAADVEFFYSDLSMLFLQSDWPTIAAVNLPGGGPAYPLSTPGVRIKYEFPKDASFL
                     FAIFNGNPAGPCPGDPDTCNRYGLNFRLQDPAFMIGELQFRRNRGNDDTGLATTLKIG
                     AWSHLGQFADQRFANNGALLASPASSGVPLMHRGDYGIYGVIDQQLYRTKNGDGDSGV
                     SVFGRGSVSPSDRNQVSFYLDGGIVFKGMVPNRPNDSFGAAIIYARFSDSVRAFDQDQ
                     INFGTLSTPPRDYEANLELTYAAQIVPGWTIQPVYTYIWHPSGTGVRLPDAQVAGFRS
                     VIRF"
     gene            complement(4289..>4673)
                     /locus_tag="VIY07_01600"
     CDS             complement(4289..>4673)
                     /locus_tag="VIY07_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY6380479.1"
                     /translation="PAFAAVLRVPFAAIAPMIVVSCAIGAYAIQNAMFDIWLMLLFGV
                     VGYVFKKIGIPLAPFTLALVLGSRAEDAFRLAMIGAGGDLRVFWSNALVGSITTLAFI
                     LLFWPLIGKLVARAGELVQLRKPIT"
BASE COUNT         1043 a         1415 c         1326 g          889 t
ORIGIN      
        1 gaagccctcg aacgtcaggg taagcgtcac caggagcgag tgccagagca gccctgcatc
       61 cgagataagc gtcgccagca ccagacccgg gccgggcaat acaaacgggg ggatcgcgaa
      121 tccgcgcacc accagatccc agagaattat tacaagtccc agcacaaaga ccggaagaca
      181 aatgcgcagg acccgctgag tcatgacgcg gctccgcttg ccatcgcctg cgccagcgct
      241 tcggcgacct gccgacagaa tgccgcgtat tccgaggagg tccggaaacg ctcgtcgcgc
      301 ggatacggcg cgtcgatgac tatttcggta aagacgcgac ccggacgcgg cgtcatcacc
      361 acgatccgtt gcgacagata aaccgactcg aaaacagaat gcgtaacgaa aatcaccgtg
      421 cgccgaaggt cctgccacac cgccagcaga tcgttgttga gcttgaagcg tgtgatttca
      481 tccagagcag cgaatggttc atccatcagc agtaattgcg gcctcgtcac caaggcgcgc
      541 gcaatcgaca cgcgcatctt catgccgccc gaaagttcgc gcggatagct ccgtgaaaaa
      601 ccggcaagac cgacgcgttc cagcgcctgc acgacttcgc ccccatcgtc cttgccggcg
      661 agcctgaacg gcagtcctac attggccgag acgtcagccc agggcatcaa ggtcggttcc
      721 tgaaacacga aaccgatttg cgccgccccg ctcggccatt cgacgatgcc cgcggacggc
      781 ccgctcaatc ccgcaataat gcgcagcgcc gttgacttgc cgcaccccga aggcccgagc
      841 agtgaaacga attcacccgt ctggacatca agatccagcc catcgagcgc gcgaattccg
      901 ttcgagaaat tcttttcgac gccgcgcagc gtgacgatgg gcgagttgcc cggcgaatta
      961 tcgtttggtg gcaaagccga caatgcttaa cctggtcaaa agccttcgat ggcaagttca
     1021 atcaatttcg cttttccaca gtacatggta tcgcgcgtac gatattattt tttcggccgg
     1081 agctctgcac cgacattctt gttgacgaac tgcaatgtgt aggcccgctt gtagtcggtg
     1141 cccgccttca caacgccggc gcgaaccatc ttgtcgaaaa agctcttcca tttcgcgtcc
     1201 gtcatcgcgc cgatgccgag cttcagcgag tcgccggaat ctacgatgcc atgttccttc
     1261 atcctggcga tcgaataggc cagcagggca tcggtcattt ccggattcat tttcttgatc
     1321 aggtcgtttc ccggatggct gtcgccataa atgtagttat accagccgat cgccgacgca
     1381 tcgacaaacc gttgcacgac gtcgggtcgc ttctcgacca ggtcgcggcg cgtctcgatc
     1441 agagtcgaat aagcatcaaa gccataatcg gccagcagga acacgacagg cttgaagccg
     1501 ccctgacgtt cgatggcgaa gggctcggac gtgacgtagc cctgcatcgc ggagttcttg
     1561 tcggcaagga aaggctgggg attgaacgtg tagggcttca ccttcgattc attgaagccg
     1621 agctccgatt tgagccactg gaaataagtc gtcatcccct ccttggagat aaacaacgtg
     1681 cgcgttttca gatcgtcgag ctttgtcacc cccggatgtg cgacaaaaac ctgaggatct
     1741 ttctggaaac tcgccgccac agcgacggtc gggatgttat tttcgactgc atcgaatgac
     1801 tgcagcgaat tggcgctcat ataaaagtcg aggcgaccga ccggcagcag tatccggttg
     1861 ttcgtgttcg gcccgcccgg cacgatgacg acatcaaggc catacttttt gtacgtgccg
     1921 tcggcgaggg cctggtaaaa gccgccatgc tcggcctccg ccacccaatt ggtgccgaaa
     1981 cggacctggt caagcgcccc ggccccgccg gccgacagag ccaaaaagcc caataaaaca
     2041 aaggaaaatc tcgtcataga gctgctttct cagcgggtct gcgcggggac gataccgcct
     2101 gcgaaactcc attgaacctt ttcacgcgcc ggcgcgaccc atgcatatcg cggccgttgc
     2161 gcgccgcccg aatttaacag gatggagacc gccatgacca agtccaagat caccgcagcc
     2221 accctcgccg ccctgacact cgcgggcagc cttgccatca ccagcggcac tgctcaggct
     2281 cattctcgct ggggcaccgg cgtcggcatc ggctttgcgg ccggcgcact gatcggcgct
     2341 gccgccgttt cgaacgcata tgccactccc gtatatgtcg cgccgtcgtg ccggctcgtg
     2401 gagcgttatg accgctaggg caacgtgcgc ctgatccggg tctgcaatta ctagttcgag
     2461 tccgttggat cggcgcctgc cccgcccatc ctcgcgccga tctgaacgac ccgcccggca
     2521 atgtccccgt ccgggcgggt cagtcttttc agaatctgat gacagagcga aagcctgcga
     2581 cttgtgcgtc gggaagacgg acgccagtgc cactcggatg ccagatatag gtgtacaccg
     2641 gctggatggt ccagcccggt acaatctggg cggcataagt aagctcgaga ttggcctcat
     2701 aatcgcgagg cggcgtggaa agggtcccga agttgatctg atcctgatcg aaggcgcgaa
     2761 cactgtcgga aaaacgagcg tagatgatgg ccgcgccgaa gctgtcgttt ggccgattcg
     2821 gcaccatgcc tttgaaaaca attccaccgt caaggtagaa actgacctgg ttccggtcgg
     2881 atggacttac cgacccgcgc ccgaacaccg atacgccgct gtcgccgtcg ccatttttcg
     2941 tgcgatagag ttgctgatcg atgactccgt aaatcccgta atcgccacga tgcataaggg
     3001 gcacgccgct gctggccggg cttgccaaca acgcaccgtt gttggcaaag cgttgatcag
     3061 cgaactgtcc gagatgactc caggcgccga tcttcaaagt cgttgcaagt ccggtgtcat
     3121 cattgccgcg atttctccga aactgcagtt cgccgatcat gaatgccgga tcctgcagac
     3181 gaaaattcag tccatagcgg ttgcacgtgt cgggatcgcc cggacagggg cctgcgggat
     3241 tgccgttgaa gatcgcgaat aagaatgatg catcttttgg aaactcgtat tttatccgca
     3301 cacccggcgt cgataacggg taggcggggc ctccgcccgg aagattgact gccgcgatcg
     3361 tgggccagtc gctctgcagg aacagcatac tcagatcgct gtagaagaat tcaacgtcgg
     3421 cggcgagctg gccaaatcgg aagctgaccg gtccaaccca gcgttcgagc cacaattcgg
     3481 ataatcgcac agtggggtcg gcttcgatcg ccgcgatcgt gttcatgccg ccgacatagt
     3541 cgcgacggat gcggccactg ttatagattc caaacgcatt ggcataaaac gtccagtcct
     3601 tccatccggc cagcttctca agatcgatca acagctgcgc ttccagcttg ccctgatcga
     3661 ttacaccccg gcgaaggcct ccggacatat tgcccagaac atcgttggtg tagatgaggt
     3721 tgtacgaaac gccgcgatcg tagagccatt tgcgggtgcc ggacggatcg ccatggtaag
     3781 gcaggctggt cgcgatcgac ggctcagtga tgccactgtc gtcagtgcca ttttgggccc
     3841 agagcggccc gccacagccg accgcacaaa gcgcaactat cgcgcgcaga aacaaaaggc
     3901 gatcgaggtt cattcccgcc tacgtgacct gtttttgcac tgcaagaccg cccccatgac
     3961 acgtcacttg ggcatgcctc ggagcatacc tgcggcagga ctccgcgcaa tttggtttgc
     4021 ccatgaaacc acgggtttat gacaatgaaa tcggcctgcg aaaagcgctg cgaagacgca
     4081 ccccgatgcg aacccgattt actgaggtga aatgtttatt tcgcggtaat gccgtaacgg
     4141 tccgccaatt cactataacg ctcgcgataa ctaaaccggg atacagttct tggatcgcgt
     4201 tgccggaaaa attttcgcac agctcaacgc gcgaccgcag gcaagcgcac gcaatagcgt
     4261 gatcgccgcg gaataaggct gcgccgggtt aagttatcgg cttgcgcaac tgaacgagct
     4321 cgccggcgcg cgcgacgagc ttcccgatca agggccagaa aagcaggatg aacgcgaggg
     4381 tcgtaataga gccgacaagg gcgttcgacc aaaacacgcg gaggtccccg ccggcaccaa
     4441 tcatcgcaag ccgaaaggcg tcttcggcgc ggctgccaag cacgagggcg agggtaaagg
     4501 gcgccagtgg aatgccgatc ttcttgaaca catagccaac aacgccgaac aacagcatga
     4561 gccatatgtc gaacatcgcg ttctggatgg cgtaggcgcc gatcgcgcag gatacgacga
     4621 tcatgggtgc gatggccgcg aatggcacgc gcagcaccgc ggcgaatgcg ggg
//
LOCUS       DATDHO010000090         1867 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_448808, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000090 DATDHO010000000
VERSION     DATDHO010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1867)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1867)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1867
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448808"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1039
                     /locus_tag="VIY07_01605"
     CDS             <1..1039
                     /locus_tag="VIY07_01605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002966418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEY6380480.1"
                     /translation="DATVKGLSSHFVWLNRSKESLTLDLKHSRATPILKRLLERADVV
                     IQNLAPGAARRLGLGAETLLPKYPRLIVCDISGYGDDGPYGSRKAYDLLVQAEAGVLS
                     VTGTGDTPSKVGISIADIAAGMYAYSGILTALYRREKSGKGTRIEVTLLEALAEWMGY
                     PLYYTHFGGTAPARTGPDHATIVPYGRYQTGDGKSIILGLQNEREWTIFCEKVLRQPN
                     LAQDPRYDSNSKRAANRSEINALIAEVFATFTAEQLIERLDASGIANARMNTPDEVWE
                     HPQLKTRDRWREMGSPVGLLATLLPPVTTPDFEARIDAVPALGEHTERILSELGYGSG
                     DITALREADVV"
     gene            complement(1067..>1867)
                     /locus_tag="VIY07_01610"
     CDS             complement(1067..>1867)
                     /locus_tag="VIY07_01610"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6380481.1"
                     /translation="YTLKTAQHFDALPSWKSVMLLPLEKRKQAFRDPEVRARLHLEAV
                     ETPNNPRRAGDFTRRWDLQFVFQSALPKHQHLKGKSVAEIAREQGRDVLDTFLDLALE
                     EDLETEFERREVNSDEAAMTALLTSPYTVIGQSDGGAHVVFRTDYSYSTYLLSHWVRE
                     KGIMSLEEAIRKLTFVPASLFGLFDRGLVRPGMAADLMVFDPATIGPLEPGEAQDFPG
                     GAKRRKQLAQGIEWTVVNGQVLLEKGKHTGVYPGKVARTLSPATGNGR"
BASE COUNT          368 a          579 c          555 g          365 t
ORIGIN      
        1 cgacgcaacc gtcaagggcc tgtcgtcgca tttcgtctgg ctcaaccgtt ccaaagagag
       61 cctgactctg gatctcaagc actcgcgtgc gacgccgatt ctcaagcggc tacttgagcg
      121 cgcggatgtc gtgattcaaa atctcgcgcc gggcgctgcg cgacggcttg gcctcggcgc
      181 cgaaacgctg ctgccaaagt atccaaggct catcgtctgc gacatttcgg gctacgggga
      241 tgacgggccg tacggttcga gaaaagccta cgatctcctg gtgcaagccg aagctggcgt
      301 gctgtcggtc accggcacgg gcgacacgcc gagcaaagtc ggaatttcca tcgctgacat
      361 cgcagccggc atgtacgcct attccggcat cctcacagcg ctttacaggc gcgagaaatc
      421 gggcaagggc acgcgcatcg aagttaccct gttggaggcg ctcgcggagt ggatgggtta
      481 cccgctttac tatacgcatt tcggcggcac ggcgccggct cgcaccggcc ctgatcatgc
      541 gacgatcgta ccctacggcc gttatcaaac cggggacggc aaaagcatca ttctcgggtt
      601 acagaatgag cgcgaatgga ctattttctg cgagaaagtg ctgcgccagc ccaacctcgc
      661 gcaagaccca cgctacgact caaactccaa gcgcgccgcc aaccggtccg agattaacgc
      721 gctgatcgcc gaagtgtttg caacgtttac ggcagaacag ttgatcgagc gtctcgatgc
      781 gtcaggcatc gccaatgcgc gcatgaacac gccagacgaa gtatgggagc atccgcaatt
      841 gaaaacccgc gaccgctggc gcgagatggg ttcgccagtc ggcttgctgg cgaccctgct
      901 gccaccggtg acgacgccag acttcgaagc gcggatcgat gcagtgcccg cactgggcga
      961 gcacacggag cgcatcctga gtgagcttgg ttacggcagc ggggatatta ccgcattgcg
     1021 cgaagcagac gttgtttgaa tcaagcgtgc ttgcgctgtc ttccggctag cggccgttgc
     1081 ctgttgcagg actcagagtg cgcgccacct tacctggata aacgccggtg tgcttgcctt
     1141 tctccaagag gacttgtccg ttcacaacgg tccactcgat gccctgagcg agctgctttc
     1201 gacgtttggc cccacccgga aaatcttgcg cttcccccgg ctccagcggc ccgatggtcg
     1261 caggatcgaa caccatcaga tccgcggcca tacctgggcg caccagcccc cggtcgaata
     1321 atccgaacag cgacgccgga acgaaggtga gctttcggat cgcctcctcg agcgacatga
     1381 tccccttctc gcggacccag tgagacagca ggtacgtaga gtagctgtag tcggtccgaa
     1441 agacgacgtg cgctccgccg tccgactgcc cgatgacggt gtacgggctg gtaaggaggg
     1501 cggtcatagc ggcttcgtcg ctgtttactt cgcgccgttc gaattccgtc tccagatcct
     1561 cttcgagagc caggtcgagg aacgtgtcca gtacatctct tccctgttcc cgggcgatct
     1621 cagccacgct cttacccttg aggtgctgat gcttcggcaa tgcggactgg aacacgaact
     1681 gcaaatccca acggcgcgta aagtctccgg cgcgcctggg attattgggc gtctcgacgg
     1741 cttccagatg aagcctggcg cgcacctccg ggtcccggaa cgcttgtttg cgcttctcca
     1801 acgggagcaa catcaccgat ttccagctag gcagggcgtc gaagtgttgg gcggtcttca
     1861 gcgtgta
//
LOCUS       DATDHO010000091         9330 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_3721, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000091 DATDHO010000000
VERSION     DATDHO010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 9330)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9330)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9330
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3721"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            305..1834
                     /locus_tag="VIY07_01615"
     CDS             305..1834
                     /locus_tag="VIY07_01615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HEY6380482.1"
                     /translation="MLGANDALQNASAEGDTRTLSFHHLHTGEDITVTFKRNGRYDDA
                     ALKKLDWFMRDWRKDKSTRMDPHLFDLLWEAYREVGATQPIDVVCGYRSPETNSMLRR
                     RSSGVSQFSQHMSGQAMDFFIPGVPLEKLREVGLRLQRGGVGFYPTSGSPFVHMDTGT
                     IRHWPRMTHDQLARVFPDGRTVHVPSDGQPLRNYTLALADVERRGGKPSETSLDAARE
                     AGVIQGDGSSARPGRGFFARLFSGGKDPDEASEDAGQKNSRVAVASVSSPKPKTVSVE
                     RIVPLPASRPNTIAVAAAEPKTSVAAVPVKPASQSFVTASLGGSLFDNRGYWRGAIQN
                     GPDLPRAVTASTKYQTASLDPTTTGTTALAYAAESEMPKPAQARPMGALPKHQPTEAT
                     VMPAQGNTTIVEKPALTPAQANGGQPVESPWLRAAILTPSFSSAMTTTRLGAVDMRPL
                     QDLLHKPAHSLAMSFSADPTSGISSSRFNGGPAIVFLATTTFATQSTASAFALQTTAL
                     R"
     gene            complement(1838..2113)
                     /locus_tag="VIY07_01620"
     CDS             complement(1838..2113)
                     /locus_tag="VIY07_01620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2312 domain-containing protein"
                     /protein_id="HEY6380483.1"
                     /translation="MSATASAEKEKPATRFAKDQLKAFVERIERLEEEKKATSDDIRD
                     VYAEAKGTGFDAKALRTIVRLRKLDMDERREQQEVLDTYLHALGMAS"
     gene            complement(2237..2533)
                     /locus_tag="VIY07_01625"
     CDS             complement(2237..2533)
                     /locus_tag="VIY07_01625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1244 domain-containing protein"
                     /protein_id="HEY6380484.1"
                     /translation="MDDRTRTELEAAVFRRLVEHLRSRTDVQNIDLMNLAGFCRNCLS
                     NWMKEAADAKGLALSKDESREIVYGMPFDEWRQKYQKEATPEQKAAFEKSSPRH"
     gene            complement(2654..4450)
                     /locus_tag="VIY07_01630"
     CDS             complement(2654..4450)
                     /locus_tag="VIY07_01630"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6380485.1"
                     /translation="MLLDAVSEKWKVPVSELTTDKSTISHKKSGRKITYGEVVAFATI
                     PAEPPKISEADLKKPAQFKLIGRKDIGRSDVPSKVNGSAIYGIDVQVPGMVYASVLQA
                     PMEGAKSKDVNAPDVMKIKGVTQVLPLPFGVAVIGDSVEATRAGVQALKVNWDTSGAT
                     GAGFDSDKAKSDYAAKAKDPNVETKVEYQVGDVKAGMSGAARTVEAAYWSEYTYHAQM
                     EPMNAVAKVSEDGKSADIWTGTQFGALAAQILSGILKTTPDQIRVHQQFLGGGYGRRI
                     WPDAAIQATILSNITKKPVKLILTREEDLVAARPRPMTHHLLKAGLDAKGNVVSWHHR
                     LVSENVDAVAAPPRFKASGGKDYIGARGLDQAFYAIPNALAEYVREERGMRVHAWRGI
                     GSGYNKFAAEAFLDEVAQAAGKDPLALRLELTKDKPRANAVLKAVAEMSDFTRKRPGR
                     GMGIAFSDYHDTLSAGVAEISLDEKTGKIKVHNYWIVADPGLVVQPDSANAQLESAVV
                     YGLSAALIEQLPFKDGTVQATNFDSYPVMRMSEMPEIHTRILATNNPPSGMGEIGVVT
                     VGPAIANAVFQLSGKRLRHLPMTAERVKKALA"
     gene            complement(4872..5108)
                     /locus_tag="VIY07_01635"
                     /pseudo
     CDS             complement(4872..5108)
                     /locus_tag="VIY07_01635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017957178.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
     gene            5213..6502
                     /locus_tag="VIY07_01640"
     CDS             5213..6502
                     /locus_tag="VIY07_01640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEY6380486.1"
                     /translation="MNRSLRAFLADLYRIAVVQAHPASCLPPLLPPAPAGKLVLLAAG
                     KAAGSMSEVAEAHYLDQLRIAAERISGVAVARHGYGRSLRRVRMIEAGHPIPDAAGLE
                     GADLAIKLADDANVNDLVLVLMSGGASANWIAPAEAISFGDKQAITRALLRSGAPIGE
                     INTVRKHLSRIKGGRLALHARPAKAMTIAISDVPGDELSAIGSGPTVPDPTTLQDARA
                     IIAKYNLDAPDSVKRALNDPKNETPKPGDPIFAGNEVALAARPADSMRAAEAAVRKAG
                     YDCVLLGDRIEGEAREVAAIHATLARDLRAQGKRAVLLSGGELTVTIRGNGRGGPNQE
                     YALALAIGLAGMPAVAALAGDTDGTDGGGGAATDPAGALVDGESVARAKARGLDPAAF
                     LADNDSTAFFEALGDLLVPGPTYTNVNDFRAIVVDRP"
     gene            6547..7098
                     /locus_tag="VIY07_01645"
     CDS             6547..7098
                     /locus_tag="VIY07_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1036 domain-containing protein"
                     /protein_id="HEY6380487.1"
                     /translation="MTALRLIAMKPRFRRFLASAAGPAVLLLGVFTQSANADFRLCNN
                     TGSRVGVSIGYKDNEGWTTEGWWNVASRSCETLLRGSLVARYYYIYAVDYDRGGEWSG
                     KAYMCSREKEFTIRGTDNCLARGYDRTGFFEVDTGEQRSWTVQLTDAAEQVPDRPLPP
                     RTPLGTSRPPTTLSPPPAGGAKP"
     gene            7095..8522
                     /gene="pyk"
                     /locus_tag="VIY07_01650"
     CDS             7095..8522
                     /gene="pyk"
                     /locus_tag="VIY07_01650"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEY6380488.1"
                     /translation="MRRLRRTKIVATLGPASSNADMIARLFEAGADVFRINMSHTSQD
                     RMRELVEMIRTVERDTDRPIGVLIDLQGPKLRLGTFEGGSAVVKTGDTFVLDADAAPG
                     NAARVHLPHPEIFATIKPNHTLLIDDGKIRLTVIEADSKRIVTRATIGGKLSDRKGVS
                     LPDTTIPFSSLAAKDRSDLEAALETGIDWVALSFIQRPEDVAEANKITRGRAALMAKI
                     EKPQAVHRLAEIIELADALMVARGDLGVEMPLEKVPGVQKQMTRAARVAGKPVVVATQ
                     MLESMINAPVPTRAEVSDVATAIFEGADAVMLSAESAAGQFPIQAVATMNRIAEEVEA
                     DPLYRNIIAAQRAQPEATGADAIADAARHIADTLDLAAVVCWTASGSTGLRVARERPQ
                     PPIVALSPNIATGRRLAVVWGVHCVVTEDAHDQDDMVDRACRIAVKEGFAKPGQRVIV
                     VAGVPLGTPGTTNMLRIAFVGPPGS"
     gene            complement(8538..9161)
                     /locus_tag="VIY07_01655"
     CDS             complement(8538..9161)
                     /locus_tag="VIY07_01655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380489.1"
                     /translation="MRIRFLAALLIAALAVTLVVTWAVPSAAQSAKRNEQGAKPSQAT
                     RVDRSRNLDFLFGALKAAPDDATAKAIEERIWTVWAASRSDTTNLLMTRVKTAVEAKD
                     LDLAVKLLDSIVKIKPDYVEGWNRRATIFYMRKDYGRALNDIREVLKREPRHFGALAG
                     FGLILQDIGDDRQALEVYRRALAVHPRMERIPDLVKTLQEKVEGRDI"
     gene            complement(9240..>9330)
                     /locus_tag="VIY07_01660"
     CDS             complement(9240..>9330)
                     /locus_tag="VIY07_01660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012709334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribosomal protein bL36"
                     /protein_id="HEY6380490.1"
                     /translation="RHRNNRLVRRKGRVYIINKTNRRYKARQG"
BASE COUNT         1698 a         2972 c         2852 g         1808 t
ORIGIN      
        1 gttgcactgc cgtcccgggc tattgcattg caaaattccc cagcgaagtt tcagaaatgc
       61 ccctttttcg gccaaattac ccgggaagtt tggatccgga cggacggggg attggcggta
      121 acatcacgtt aaccgatccc gacaacactc acggggttgc cgccatggca gcccgagggg
      181 acgtgacggc ttcgtgggac ggacatcacg aaaccatact gtcgctattg acgcgtcgcg
      241 cgagcgttcg ctcgttgtga cgttagcgcg cgccggtgcc tgtctgggcc tggcaggact
      301 attcatgctt ggcgcaaacg atgcgctgca aaacgcgagc gccgaaggcg atactcgcac
      361 cctctctttc caccatcttc acaccggcga ggacatcacc gtcaccttca agcgtaacgg
      421 ccgctacgac gacgccgcgc tgaagaagct cgactggttc atgcgcgatt ggcgcaaaga
      481 caaatcaacc cgcatggatc cgcatctgtt cgatctgctg tgggaagcct atcgcgaggt
      541 cggtgcgaca cagcccatcg atgttgtgtg cggttatcgt tctcccgaaa ccaactcaat
      601 gttgcgcagg cgctcgagcg gcgtctcgca gttcagccag cacatgagcg gccaggcgat
      661 ggatttcttc atcccgggcg tgccgctcga aaaactgcgc gaagtcggcc ttcggctgca
      721 gcgtggcggt gtcggtttct atccgacttc cggctcgcct ttcgtgcaca tggataccgg
      781 gaccattcgt cactggccgc gcatgacgca cgatcagttg gccagggttt tccctgatgg
      841 gcgcaccgtg cacgttcctt cggatggcca gccgctgcgc aattatacgc tcgccctggc
      901 tgacgtggag cgacgcggcg gcaagccctc ggagacgtca ctcgacgccg cacgtgaggc
      961 aggcgtgatc cagggtgacg gctcgtccgc gcgaccgggt cgcggcttct ttgcccgttt
     1021 gttcagcggc ggcaaggatc ccgacgaggc tagcgaggac gctggccaga agaattcccg
     1081 cgtagcggtc gcgagcgtga gctcgcccaa acccaagacg gtgagcgtgg aacgcatcgt
     1141 gccgctgccg gcctcgcggc caaacacgat cgccgttgcc gcggccgaac cgaagacgtc
     1201 ggtcgccgcc gtgccggtga aaccggcaag ccagtccttc gtgacggcct cgctgggcgg
     1261 cagcctgttc gataatcgtg gttattggcg aggggcaata caaaacggtc cggatctgcc
     1321 gcgggctgta actgcatcga cgaaatatca gaccgccagt ctcgacccga ccacgaccgg
     1381 aacgaccgct ctcgcctatg ccgctgaatc agagatgccg aaaccggcac aagcccgccc
     1441 gatgggcgcg ctaccgaagc atcaacccac ggaagcgacg gtcatgccgg cgcagggcaa
     1501 cacgacgatc gtggaaaagc ccgccctgac gccagcccag gcaaacggtg gacaaccggt
     1561 cgagagcccc tggctgcgcg cggcgatcct tacgccaagt ttcagcagcg ccatgaccac
     1621 gacacggctt ggcgcggtcg acatgcggcc gttgcaagac ttgctgcaca agcctgcgca
     1681 ctcgctcgcg atgtcgtttt ccgccgaccc gacttctggc atatcgtcga gtcggtttaa
     1741 tggaggtccg gcgatcgttt tcctcgctac cacgacgttc gcgacgcaat cgactgcgag
     1801 cgcgttcgct cttcagacga ctgcgctgcg ctgatcgcta gctagccatt cccaacgcgt
     1861 gcagataggt atcgagcact tcctgctgct cgcggcgctc gtccatatcc aatttgcgca
     1921 gacgcacaat cgtgcgaagt gccttcgcat cgaagccggt gcccttggcc tctgcgtaga
     1981 catcgcgaat gtcgtccgag gtcgcctttt tttcttcttc aagacgctcg atgcgttcaa
     2041 cgaaagcttt cagctggtcc ttggcaaaac gagtggccgg cttttctttt tcagccgagg
     2101 cggtggcaga catcgacgtc tccttgactg cgcaggcggc gatttgccgc cgttgcgcaa
     2161 agctttcgga gttggaggtc ctccggtcaa ggcaaggacg ccgtcatcca cgctgttcac
     2221 aagtagccgg tgagcactag tggcgcggac tggacttttc gaatgccgcc ttctgctccg
     2281 gcgttgcttc tttctggtat ttctggcgcc actcgtcgaa tggcatgccg tagacgatct
     2341 cgcggctctc gtccttgctc aaggcgagac ctttggcatc agcagcttcc ttcatccagt
     2401 tcgacagaca attgcggcag aagccggcga ggttcatcag gtcgatattc tgcacgtcag
     2461 tgcgcgaacg aagatgttcg acgaggcggc ggaagaccgc tgcctccagt tcggtgcggg
     2521 ttctgtcgtc cattcgtggt gtcctccaca ctagaaaaca taaacatgcc cccggcgagt
     2581 ttgaagacct gccacggaac ataaaaagcc cgccgcatcg ctcggatgcg gcgggcttcg
     2641 atctgtgttg cgctcaggcc agcgccttct tcacccgctc ggcagtcatc ggcaggtggc
     2701 gcagccgctt gccgctgagc tgaaacacag cgtttgcgat cgcagggccg accgtgacga
     2761 cgccgatctc gcccatgcca ctgggcggat tgttggtggc gaggatccga gtgtggattt
     2821 ccggcatctc gctcatgcgc atgaccggat agctgtcgaa gttggtcgcc tgcacagtcc
     2881 cgtccttgaa aggaagctgc tcgatcaatg cggcactcaa gccataaacg accgcgcttt
     2941 cgagctgcgc attggcgcta tccggctgaa cgacaagacc gggatcggcc acgatccagt
     3001 agttatggac cttgatcttg cccgtcttct cgtcgagcga gatctccgcc acgcccgccg
     3061 acaacgtatc gtggtagtcc gagaacgcga tgcccatgcc gcggcccgga cgcttgcggg
     3121 taaaatcgga catctccgcc accgccttga gcacagcatt ggcacgcggc ttgtcttttg
     3181 tcagctcaag ccgcagcgcg agcgggtcct tgccggccgc ctgcgccacc tcgtcgagaa
     3241 aggcttcggc cgcgaacttg ttgtagccgg agccgattcc gcgccatgcg tgcacgcgca
     3301 tgccgcgctc ctcgcgcaca tattcggcaa gggcattcgg aattgcatag aaggcctgat
     3361 cgaggccccg cgcgccgata tagtccttgc cgccggacgc cttgaaacgt ggcggagctg
     3421 ccaccgcatc gacgttctcc gacaccaggc gatgatgcca gctcacgacg ttgcccttcg
     3481 catcgaggcc cgccttgagc agatggtggg tcatcggccg cggacgcgcg gccacgagat
     3541 cctcctcacg cgtgaggatc agcttcacgg gcttcttcgt gatgttggag agaatcgtgg
     3601 cctgaatggc cgcgtcgggc cagatccgcc ggccgtaacc accacccagg aactgttggt
     3661 ggacccggat ttgatccggc gtggtcttca ggatgcccga gaggatctgc gcggcgagcg
     3721 ccccgaactg ggtgccggtc cagatatcgg ctgacttgcc gtcctccgag accttcgcca
     3781 ccgcattcat gggctccatc tgcgcgtgat aggtgtattc agaccaatag gcggcttcga
     3841 cggtcctggc tgcgccgctc atgcccgcct tcacgtcgcc gacctgatac tcgaccttgg
     3901 tctcgacgtt cgggtccttg gccttggcag cgtagtcgct ctttgccttg tcggagtcga
     3961 accccgcgcc ggtggcaccg ctcgtgtccc aattgacttt gagggcctgg acgcccgcgc
     4021 gtgtggcctc aacagagtcg ccaatcaccg ccacgccaaa tggcagcgga aggacctggg
     4081 tcacaccctt gatcttcatc acgtcgggtg cgttgacgtc cttcgacttg gctccttcca
     4141 tcggtgcttg cagcaccgag gcgtagacca tccctggcac ctgcacatcg atgccgtata
     4201 tcgccgagcc gttgactttg gatggcacgt cgctgcggcc gatgtccttg cggccgatca
     4261 gcttgaactg cgcaggcttc ttgagatccg cctcgctgat cttcggcggc tcggccggaa
     4321 tcgtggcaaa ggccacaacc tcgccgtacg tgatcttgcg cccggatttc ttgtggctga
     4381 tggtgctttt gtcggtggtc agctcgctca ccggcacctt ccacttctcc gacaccgcat
     4441 cgagaagcac cttccgtgcc tgcggccatg cgaagcggcg tgaaatagcc cggcaccgac
     4501 acgctggcgg cggtgatctg cgcgccatgg aataaggtgt gcggattgcc gtagaccttc
     4561 ggattggccg gcgcaaactc cgtcttcact ttcgaccaat cggcatcaag ctcttcggcc
     4621 aaaatcagcg gcaacgatgt gtagacgcct tggcccattt cggccgctgg acagacgatg
     4681 ctgattgtat tgtttggagc aatgctgacc caggcgttga acttggtcgg ttgcgttgcc
     4741 ccgagtgctt cgcccccgcg gccaatgccg ccgagcgtga atgcaaaggt catcccggca
     4801 gcgccggaca caaagcctcg ccggctgatg ctggtgtcga gggagccgtt tctgatctga
     4861 atcgtcatgg cttaggcctc ccgagcggcg cgctgaatgg cgcgcacaat gcgcggatac
     4921 gtgccacagc ggcagatgtt gccgtccatg tgggcgacaa tctgctcgcg cgtaggcttc
     4981 ttgttcgtgg ccagcagcgt tgccgcctgc atgatctggc cggactggca gtagccgcac
     5041 tgcggcacct gctctgcgat ccatgccttt tgcagcggat gctgcccgtt tggcgaaagg
     5101 ccttcgaccg gcttgtcggc acagcataaa tcccggcaaa ccgccgtgct gcgccaaggt
     5161 ggggaggcga tttaagcaga ttttcccgac agtgggcagc tatgatcgaa taatgaatcg
     5221 ttccctgcgc gcttttctcg cagatcttta tcgcattgcg gtagtgcagg cccatcctgc
     5281 gtcctgcctg cctccgctgc tgccgccggc cccagccggt aagcttgttt tgcttgccgc
     5341 cgggaaggca gcgggttcga tgagcgaagt ggccgaagcc cactacctcg accagctgcg
     5401 aattgccgcc gagcgcataa gcggtgtggc ggtggcacgg catgggtatg ggagatcact
     5461 ccgacgcgtt cgcatgatcg aggcgggaca tcctatcccg gacgcagcgg gccttgaggg
     5521 tgccgatctc gcaattaagc tcgccgatga tgcgaatgtg aatgatctcg tgttggtctt
     5581 gatgtccggg ggtgcctcgg ccaactggat cgcgccggct gaagcaattt ccttcgggga
     5641 caagcaagcg atcacgcgcg cgctgctgcg ctccggcgcg ccgatcggcg aaatcaacac
     5701 cgttcgcaaa catttgtcgc gaatcaaagg tgggcgtctg gcgctgcacg cgcgtcccgc
     5761 caaggccatg accatcgcaa tttcggacgt tccgggtgat gagctttcag ccatcgggtc
     5821 ggggccgacc gtacccgacc caaccaccct tcaggacgcg cgagcgatca tcgcaaaata
     5881 taatctcgac gctcccgata gtgttaagcg cgcactcaac gatccgaaga atgagacgcc
     5941 gaagccgggc gatcccatct ttgccggcaa cgaagtcgca ctggccgcgc gaccggcgga
     6001 ttcaatgcgg gcggcggagg cggcggttcg caaggccggc tacgattgcg ttttgctcgg
     6061 cgaccgtatc gagggcgaag cgcgcgaagt tgctgccatc cacgccaccc tagcgcgcga
     6121 tctgcgcgcg cagggaaagc gcgcggtgct tctttccggc ggcgagttga ccgtgaccat
     6181 ccgcggcaat ggccgcggcg gaccaaatca ggaatatgcc cttgcgcttg cgatcggcct
     6241 tgcggggatg ccggcggtgg ctgcactcgc aggcgacacc gacggcaccg acggcggggg
     6301 cggcgcagca acggatccag cgggtgcttt ggttgatggc gaatcggtgg cgcgcgccaa
     6361 ggcccgcggc ctcgatcccg ccgcctttct tgccgacaac gattccaccg cattcttcga
     6421 ggccctgggg gaccttctgg tgcccgggcc gacctacacc aacgtgaatg acttccgcgc
     6481 catcgtcgtt gacaggccct gacggatcac gccaaaacgc gcatcattcg gagacccgcg
     6541 agaatcgtga ccgcattgcg cctcatcgcc atgaaacccc gctttcgacg cttcctggca
     6601 agcgctgccg gccccgctgt gctgctgctt ggggttttca cgcagtcggc taacgccgat
     6661 ttccggctat gcaacaatac gggcagccgg gtcggtgttt ccatcggcta caaggacaat
     6721 gaaggctgga cgaccgaggg ctggtggaac gttgcatcgc gctcgtgcga aacgctgctg
     6781 cgcggctccc tggttgcgcg ttactactac atctacgcag tcgactatga tcgcggcggc
     6841 gaatggtccg gcaaagctta catgtgctca cgcgagaagg aattcaccat tcgtggcacc
     6901 gacaactgcc tcgcgcgcgg ctatgatcgc accggatttt tcgaggtcga taccggcgag
     6961 cagcggtcgt ggaccgtgca gctgactgac gccgccgagc aagtgcccga ccggccgctc
     7021 ccgccgcgca cgccactcgg aacctcccgc ccaccgacga ccctgtcgcc gcctccggcc
     7081 ggaggcgcca agccatgaga cgtctgcgcc gcacgaagat tgtcgctacg ctcgggccag
     7141 cgtcatccaa cgccgacatg atcgcgcgcc ttttcgaggc cggcgccgac gtcttccgca
     7201 tcaacatgag tcacacgagc caggatcgga tgcgcgaact ggtcgagatg atccgcacag
     7261 ttgaacgcga tactgaccga ccgatcggag tgctgatcga cctccaaggt ccgaagctcc
     7321 ggctcggcac gttcgagggc ggctcagcag tggtgaaaac cggcgacacc tttgttcttg
     7381 atgccgatgc agcgcctggc aatgctgcgc gcgttcatct gccgcatccg gagatcttcg
     7441 ccacgatcaa gccgaaccac acgctgctga tcgacgatgg caagatcagg ctcacggtca
     7501 tcgaggctga ttccaaacgc atcgtcacgc gcgcgacgat cgggggcaag ctttccgatc
     7561 gaaagggcgt gagtctgccg gatacgacaa ttcctttttc ttcgctggct gccaaagacc
     7621 gttccgatct ggaggccgcg ctcgagaccg gcatcgactg ggtggcgcta tctttcattc
     7681 aaagaccgga agacgtcgcg gaggcaaaca aaatcacccg cgggcgcgcc gcgctgatgg
     7741 ccaagatcga aaaaccgcag gcggtccacc gcctcgccga aatcatcgaa ctcgccgacg
     7801 cgttgatggt ggcacgcggc gatcttggcg tggagatgcc gctggaaaaa gtgcccgggg
     7861 tacagaaaca aatgacgcgc gccgcgcgcg tcgccggcaa gccggtcgtg gttgcgaccc
     7921 agatgcttga atcgatgatc aacgccccgg tcccgacacg cgccgaagta tccgacgtgg
     7981 ctaccgcgat attcgaaggc gcagacgcgg tcatgctgtc cgccgagtca gccgccgggc
     8041 aattcccgat ccaggcggtt gccaccatga accgcattgc cgaggaggtc gaggcagacc
     8101 cgctctaccg caatatcatc gcggcgcagc gcgctcagcc agaagcgacc ggcgccgatg
     8161 cgatcgccga cgctgcacgt cacattgccg atacgctgga tcttgcggcg gttgtgtgtt
     8221 ggaccgcgtc cggttcgacc ggcctgcggg tggcacgcga acggccgcag cctccaattg
     8281 tggcgctgtc acccaatatc gcgaccggac gacgtcttgc cgtcgtgtgg ggtgtgcatt
     8341 gcgttgtcac cgaggacgcg catgaccagg atgacatggt cgaccgggca tgccggatcg
     8401 ccgtcaagga aggtttcgcg aagccgggac agcgggtcat tgtcgtggct ggcgtcccgc
     8461 tcggcacgcc cggcacgacc aacatgttgc gcatcgcctt tgtcgggccg cccggcagtt
     8521 gatgctcaaa tccgacgtca gatatcgcgg ccttcgacct tttcctgcaa cgtcttcacg
     8581 agatcaggaa tgcgctccat gcgtggatgg accgccagcg cgcgccgata gacctcaagc
     8641 gcctgcctat cgtcgccgat gtcctgcagg atcaacccaa atcccgccag ggcgccgaaa
     8701 tggcgcggct cgcgcttgag cacctcgcga atgtcgttca gggcgcgtcc gtagtctttc
     8761 ctcatgtaga agatggtcgc ccgcctgttc catccttcaa catagtcggg ttttatcttc
     8821 acgattgaat cgagcagctt gaccgcaaga tcgagatcct tcgcctcgac agcggtcttc
     8881 acccgcgtca tcagaagatt ggtcgtgtcg ctgcgcgaag ccgcccaaac cgtccagatg
     8941 cgctcttcga ttgccttcgc cgtcgcatcg tcgggagcgg ccttgagcgc cccgaacagg
     9001 aaatccaggt tgcggcttcg atcgacacgc gtcgcctgcg agggcttggc gccctgctca
     9061 ttgcgcttgg cggattgcgc ggcggagggc accgcccagg tgacgaccaa ggttactgcc
     9121 aaggccgcga tcagaagggc tgcaaggaat cggatgcgca tgatgatcat acgcggagtt
     9181 tagtgcgtcc gcgcagtctg gccaatatca gacgatgcaa aagacgccgc ggggccaaat
     9241 cagccctggc gagccttata acggcgattg gtcttgttga tgatgtagac ccggcccttc
     9301 cggcgcacca ggcgattatt ccggtgccgg
//
LOCUS       DATDHO010000092         3711 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_448844, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000092 DATDHO010000000
VERSION     DATDHO010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3711
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_448844"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3300)
                     /gene="dnaE"
                     /locus_tag="VIY07_01665"
     CDS             complement(<1..3300)
                     /gene="dnaE"
                     /locus_tag="VIY07_01665"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEY6380491.1"
                     /translation="MAGLDFVHLHVHSSFSLLEGGLPIARLAELAKSDNQPALALTDT
                     DNMFGALEFSEKLAGYGIQPIIGCALAVDFGDADHGPRNGNAPPERSRIVLLAARSEG
                     YCSLMRLNSRAFLDTPANEPPRLKLEWLEGQTSDIVALTGGPGGPLDGAIAAGQSHLA
                     ADRLAALLRLFGDRLYVELQRHGTSAERRCEPVLIDLAYDKGVPLVATNEPFFATAQD
                     YEAHDALICIAEGRLLAESDRRQLTPEHRFKSRAEMVELFRDLPEALSHSVEVARRCA
                     FRPRTHQPILPRFSTGDNGKALDEASELRKRAEEGLERRLETAGVAPGHTVDEYRERL
                     TFELGVIAGMKYPGYFLIVSDFIQWAKKQGIPVGPGRGSGAGSLVSYALTITDLDPIR
                     FGLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVQERYGRDQVAQIITFGTLQARGV
                     LRDVGRVLQMPYGQVDKLCKLVPQNPAAPVSLKQAIEGEPRLQAERDSDAVVKRAFDI
                     AQKLEGLNRHASTHAAGIVIGDRPLSELVPLYRDPKSDMPVTQFNMKWVEQAGLVKFD
                     FLGLKTLTVLQTAVALVKRRGIDIDLAAIPLDDKNTYDLLARAEAVGIFQLESAGMRR
                     ALLDMRPDRFEDIIALVALYRPGPMANIPTYCARKHGMEQPDYIHPKLEPILRETFGV
                     IIYQEQVMQAAQILAGFTLGEADLLRRAMGKKIRKEMQAQRERFVSGAVERGVDRYQA
                     DAIFDLLERFAEYGFNKSHAAAYALVAYQTAFMKANYPVEFLAATMTLDMGNTDKLAE
                     FRAEAERLGISVDPPSINRSGVDFEVDGNTIVYALAALKGVGRQAVEAIIAARENGAF
                     VDLADFATRINPRAVNKRVLESLAAAGAFEAFEKNRARVFAAVDPILARAQRAHDTAA
                     IGQSELFGGGAVREPIMLPQIEAWLPAERLRREYEAVGFFLSGHPLDDYAAVLKKMRV
                     QPWAEFARAVKSGTTAGRVAATVVSRIERRTRTGSKMGIIGLSDPSGHFEAVIFSEGL
                     AEHRDRLEPGNAVLLFLSAEVQGDEVRARIQSVDALDSAAANLQKGLRVFLRDGAPLE
                     AVAKRLEPAPRS"
BASE COUNT          708 a         1167 c         1140 g          696 t
ORIGIN      
        1 cgaacgcggt gcaggctcga gacgcttcgc aaccgcttca aggggtgccc cgtcgcgcag
       61 gaatacccgc aggcctttct gcaagttggc agcggcacta tcgagcgcat cgacggactg
      121 tatgcgcgcg cgcacctcat cgccttgcac ttccgccgaa aggaagagca gaaccgcgtt
      181 gcccggctcg agacgatcgc ggtgttcggc caacccttcc gagaaaatga ccgcttcaaa
      241 atgtccgctc ggatccgaaa ggccgatgat gcccatcttg ctgcctgtgc gcgtgcgccg
      301 ctcgatgcgt gaaacgacgg ttgccgcaac gcgaccagcc gttgtgccgg atttcaccgc
      361 gcgcgcaaac tccgcccagg gctgcacgcg catcttcttc agcaccgcgg catagtcgtc
      421 gagcggatgg ccggacagga agaagccaac ggcttcatat tcgcggcgca ggcgctctgc
      481 cggcaaccag gcctcgatct gcggcagcat gatcggctcg cgcaccgcac caccgccaaa
      541 cagctcgctt tgcccgatcg ccgccgtgtc gtgtgcccgc tgcgcgcgcg ctaaaatagg
      601 atcgacggca gcgaatacgc gcgcgcgatt tttctcgaag gcttcgaatg cgcccgctgc
      661 cgcaaggctt tcgaggacac gtttgttcac cgcgcgcgga ttaatgcggg tcgcgaaatc
      721 cgcgaggtcg acgaaggcgc cattctcgcg cgccgcgata atcgcttcga ccgcttgtct
      781 gccgacgcct ttgagtgcgg caagggcgta gacaatcgta ttgccatcga cctcgaagtc
      841 gacgcctgag cgattgatcg agggaggatc gacgctgatc cccagccgct cggcttcggc
      901 gcggaattcg gcgagcttgt ccgtgttgcc catgtcgagt gtcatggtcg cagcgaggaa
      961 ctcgaccggg taattcgcct tcataaaagc cgtctggtag gcaacgaggg cgtaggcggc
     1021 tgcatggctc ttattgaacc catattcggc aaaccgttcg agcaagtcga agatggcatc
     1081 agcctgatag cggtccaccc cgcgctcgac tgcgcccgag acgaagcgtt cgcgctgcgc
     1141 ctgcatttct ttcctgatct tcttccccat tgcacggcga agcagatcgg cttccccgag
     1201 cgtgaacccc gcgagaatct gcgcggcctg catcacctgc tcctggtaga tgatgacgcc
     1261 gaaggtctcg cgcaggatcg gttcgagttt cggatggatg taatccggct gctccatccc
     1321 gtgcttgcgc gcgcagtagg tcgggatgtt cgccatcgga cccgggcgat aaagcgcaac
     1381 cagcgcgatg atgtcctcga agcggtcggg ccgcatgtca agcagcgcac gccgcatgcc
     1441 cgcgctttcc agttggaaga tgccgacggc ttcggcgcgg gccagcaggt cgtaggtatt
     1501 cttgtcgtcg agcggaatcg cggcaagatc gatgtcgatg ccgcgccttt tcaccagggc
     1561 gacggcggtc tgcagcaccg tcagggtctt caggccaagg aaatcgaatt tcacaaggcc
     1621 ggcctgctcc acccatttca tgttgaactg agtgaccggc atatcggact tagggtcgcg
     1681 atagaggggc accagctccg acaatggcct gtcgccgatc acgatgccag cggcatgagt
     1741 tgaagcgtgg cgattgaggc cttcgagctt ctgcgcaatg tcaaaggccc gcttgactac
     1801 cgcatcgctg tcgcgttcgg cctgcaggcg cggttcccct tcgatcgctt gcttgagcga
     1861 caccggcgcg gccggattct gcggcaccag cttgcaaagc ttgtcgacct gcccgtacgg
     1921 catctgcagc acacggccta cgtcgcgcag cacgccccgt gcctgcagcg tgccaaaggt
     1981 gatgatctgc gcgacctggt cgcggccgta tcgctcctgc acgtaacgga tcacttcatc
     2041 gcgacggtcc tggcagaaat cgatatcgaa gtcgggcatc gacacgcgct cgggattcag
     2101 aaagcgctcg aacagcagcc cgaaacggat cggatcgagg tcagtgatgg tcagcgcata
     2161 tgaaacgagc gagcccgcgc ccgaaccgcg gccgggtccg actggtatgc cttgcttctt
     2221 cgcccattgg atgaagtcgg aaacgatcag gaaataaccc ggatacttca tgccggcaat
     2281 cacgccgagc tcgaaggtga gccgttctcg atactcatcg accgtatggc ccggagcgac
     2341 acccgccgtt tcgaggcgac gctccagccc ctcctccgcc cgcttgcgca gctcactcgc
     2401 ttcatcgagc gcttttccgt tatcgccagt cgagaaccgc gggagaatgg gttggtgcgt
     2461 gcgtgggcga aacgcgcagc gtcgcgcaac ctcgacgcta tggctgagcg cctccggaag
     2521 atcgcggaac agttcgacca tctcggcgcg actcttgaag cggtgttcgg gcgtcagctg
     2581 tcggcggtcg ctttcggcga gcagcctacc ctcagcgata cagatcagag cgtcatgcgc
     2641 ctcgtaatcc tgcgcggtcg caaagaacgg ctcgttggtc gcgaccaggg gcacgccttt
     2701 gtcgtacgcg aggtcgatca gcacgggctc gcaacgacgc tctgccgatg tcccgtgtcg
     2761 ctgcagttcc acatagagcc ggtcgccgaa tagcctcagc agcgcggcaa gccgatcagc
     2821 tgcgagatga ctttgcccgg cggcgattgc gccatcgagc ggtccacctg gaccacctgt
     2881 gagcgcaaca atgtccgagg tttgaccttc cagccattcc agtttcagcc gcggcggttc
     2941 attcgccggc gtgtcgagaa acgcgcgcga attaaggcgc atgaggctgc aatagccctc
     3001 ggaacgcgct gctagcaata cgatgcgcga gcgttcgggc ggcgcatttc cgttgcgggg
     3061 gccgtgatcg gcgtcaccga agtccacggc aagcgcacaa ccaatgatgg gctggatgcc
     3121 gtaacccgca agcttttcgg aaaattccag agcaccgaac atgttgtcgg tgtctgtcag
     3181 cgcaagcgcc ggttgattgt cggatttggc cagttcggcg aggcgcgcaa tcgggagccc
     3241 gccttccagc agcgaaaaag acgagtgcac gtgcaagtgc acgaaatcga ggccggccat
     3301 cggtgattcc ctgtcgattc cagagtgggg gtggtcctcc gccctgtcca tcaccaggcg
     3361 agcgctaagg ccaaggtatg cccgcttttc tcgggagcgg cccctgtcat ggccgggttc
     3421 accagccacc cactcctcaa tgcagggacg acatcaaggc gtggatgccc ggcacaacgt
     3481 ttggtcgggc cgccccagaa ccggtcccga atgcagggca tgacggggga cagaggggcc
     3541 gcatgggtgt cacaaatttc ccaggacctg cgtccagatg gcgatcattc cgatgaacag
     3601 cgccagcgac gccagcgctg cagcttcttg agcgatgatg cttctcttcc gaacagaaag
     3661 agaacatagt tcattatttg ttctcgagtc aagcagccag ttgtctgcgc a
//
LOCUS       DATDHO010000093         2715 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_152533, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000093 DATDHO010000000
VERSION     DATDHO010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152533"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VIY07_01670"
     CDS             complement(<1..426)
                     /locus_tag="VIY07_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY6380492.1"
                     /translation="MTVTLLDRARGDVAPTGEAKADARMPINMKLRINGREHRLTLDG
                     RTTLLDALREHVGLTGTKKGCDHGQCGACTVLIGNRRVLSCLSFAMMAEGSEITTIEG
                     LARPDGTLHPMQQAFVDHDAFQCGYCTPGQILSAIACVHE"
     gene            665..874
                     /locus_tag="VIY07_01675"
     CDS             665..874
                     /locus_tag="VIY07_01675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380493.1"
                     /translation="MSESKHRRTDKPDKPVRENIEAERERNKRREEDEVATSSDDSFP
                     ASDPPSFTGVTGAADVEKKKKNKRG"
     gene            complement(871..1875)
                     /locus_tag="VIY07_01680"
     CDS             complement(871..1875)
                     /locus_tag="VIY07_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6380494.1"
                     /translation="MSPIIDIYCHIYPDRYFQEMIRIAPKLENIGKRLRSVTKLFDLD
                     ARFKEMDEFGDYRQIISLPNPAIEDIARPDVGLNLARIANDAMAELCRKYPERFPTFA
                     AALCMTDVEGSVAEARRAVNDLGAGGVLLYTNVAGKPLDDPEFEPIFATMAELDLPIW
                     LHPVGTAAMPDYPAEKKSRFEMWWCFHWPYETSVAMVRMVFWGLFDRYPKLKIITHHL
                     GGMIPYFDGRVGPGLKVLGQRTSDEDYSNILPSLKRPHMDYLHDFFADTAMFGGGVAA
                     TRCGVEFFGADQVVFATDTPLGPIAPTIRTVQGLGLPASEERKIFSGNAEKLLNMKFS
                     "
     gene            complement(1921..>2715)
                     /locus_tag="VIY07_01685"
     CDS             complement(1921..>2715)
                     /locus_tag="VIY07_01685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019860239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6380495.1"
                     /translation="DFLKNPLSLFDVRGKTAIVTGASGAFGALAAKTLAGAGANVVLA
                     ASKADELRKVASECEKLGGKAEIIALRPSSEENCDKIVKAAVDKFGRLDILVVASGLN
                     KVSKIVDQKLEDFLDVMDANVNQSWLMARAAGKQMLKQGQGGKVILTSSARGLLGHPA
                     GYTAYCASKSAVDGITKALGCEWGESGITVNALGPTVFRSPLTDWMYEDTERAQAVRK
                     GFLARVPKGRLGEPADLAGPLLFLASKASDFYTGHILYADGGYTAG"
BASE COUNT          538 a          811 c          819 g          547 t
ORIGIN      
        1 ctcatgcaca cacgcgatgg ctgacaggat ctgaccgggc gtgcagtagc cgcattggaa
       61 ggcatcatga tcgacgaaag cctgttgcat tggatgcaac gtgccgtcgg gcctggccag
      121 gccctcgatc gtcgtgatct cgctcccttc ggccatcatc gcgaagctca ggcacgacag
      181 gacccgccgg ttgcctatga gcactgtgca ggcgccgcat tgcccgtgat cacaaccctt
      241 tttggttccc gtaagaccga cgtgttcacg tagggcgtcc agcaaagtgg tccggccgtc
      301 cagcgtcagc cggtgctcgc gcccgttgat gcgcaacttc atgtttatcg gcattcgggc
      361 gtcggctttt gcctcacccg tgggcgcgac atcgccgcgt gcacggtcga gcagagtcac
      421 tgtcattgtt gaggctgctg tggttcgcag gaaacttcgg cggctccagc cgccgggacg
      481 gtcgggtgaa gatgtcattg caccccgcgg ttatgctctg ggtcgcggat gatcctgagg
      541 tcgcctgcgg tgcggcccgg ccgcatgctt cgtcaacgga acgtctgcat gccctgggga
      601 gttcctaggc cacctgaatt cacttcggca cggaactttg cccgctgccc catcggagtt
      661 gcaaatgagc gaatccaaac atcgtcgaac cgacaaaccc gacaagccgg ttcgcgagaa
      721 tatcgaggct gaacgcgaac ggaataagcg tcgggaagaa gatgaagtcg ccacgagttc
      781 cgacgacagc tttcccgcca gcgacccacc gagttttacc ggtgtgaccg gcgcggctga
      841 cgtcgagaaa aagaagaaaa acaagcgcgg ctagctgaat ttcatattca gcagtttttc
      901 ggcattgccg gaaaaaatct tgcgctcctc tgaggcgggg agaccgagcc cctgcacggt
      961 cctgatcgtg ggtgcaatgg gccccagcgg ggtgtcggtg gcaaacacga cctgatccgc
     1021 gccaaagaat tccaccccgc agcgcgttgc ggcaacacca ccgccgaaca tggcggtgtc
     1081 ggcgaaaaaa tcgtgcagat aatccatatg cggtcgcttc agggacggca ggatgtttga
     1141 gtagtcctca tccgacgttc gctgacccaa tactttcagg ccagggccga cgcgaccgtc
     1201 gaaatagggg atcatgccgc ccaggtgatg ggtgatgatc ttcagtttcg gatagcgatc
     1261 gaacaggccc cagaacacca tcctgaccat ggcgaccgac gtttcgtagg gccagtggaa
     1321 gcaccaccac atctcgaagc gtgatttctt ttcggcgggg tagtcgggca tcgccgctgt
     1381 tcccacgggg tgcaaccaga tcggcaaatc gagttcggcc atggtggcaa agatcggctc
     1441 gaattcggga tcgtcgagcg gcttcccggc gacattcgtg tagagcagca cgccgcccgc
     1501 gccgaggtcg ttgacggcgc gccgcgcctc cgcgacagag ccttcgacat cggtcatgca
     1561 cagcgccgcc gcaaaggtcg gaaagcgctc gggatatttc cggcacaatt cggccatggc
     1621 gtcgtttgca atgcgagcga gattcagtcc gacgtccgga cgggcgatgt cctcaatggc
     1681 ggggttgggc agcgaaatga tttgccggta atccccgaac tcgtccatct ccttgaagcg
     1741 cgcgtcgaga tcgaaaagct tggtgacgct gcggagccgc ttgccgatat tctccagctt
     1801 tggcgcaatc cggatcatct cctggaaata gcggtcggga tagatgtggc aatagatgtc
     1861 gataatcggg ctcatgcgtc acaattcccc ggcgcgcaaa ttctttggat gtcgcattgt
     1921 ctatcctgcc gtatagccgc catcggcata aagaatgtga ccggtataga aatctgacgc
     1981 ctttgaagcg aggaacagca acgggccagc cagatccgca ggctcgccca ggcgaccttt
     2041 gggcacgcgc gcgagaaagc ccttgcgaac ggcttgcgcc cgttcggtgt cctcgtacat
     2101 ccaatcggtg agcggcgagc ggaagacggt cggtccgagc gcattgacag tgatgccgct
     2161 ctcaccccat tcgcacccca gcgctttggt aatcccgtcg acggccgatt tcgaagcgca
     2221 ataggcggtg tatcccgccg gatgaccgag caggccgcgc gcggacgatg tgaggatgac
     2281 tttgccgccc tggccttgct tgagcatctg cttgccggcg gcacgtgcca tcagccatga
     2341 ctggttgacg tttgcgtcca tgacatcgag aaaatcctcc agcttctggt cgacaatttt
     2401 cgaaaccttg ttcaggccgg aagccacgac gagaatgtcg agccgtccga atttgtcgac
     2461 cgcagccttg acgatcttgt cgcagttttc ttccgagctt ggtcgcaacg cgatgatctc
     2521 ggcttttccg ccaagctttt cgcattccga tgcgactttc ctgagctcgt cggccttgct
     2581 tgccgccagc actacgttgg cgccggcgcc ggcgagggtc ttggcggcca gtgcgccaaa
     2641 agcgcccgac gctccggtga cgatggcggt cttgcccctg acgtcgaaca gcgacaatgg
     2701 atttttcagg aaatc
//
LOCUS       DATDHO010000094         3611 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_102826, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000094 DATDHO010000000
VERSION     DATDHO010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3611
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_102826"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..393)
                     /locus_tag="VIY07_01690"
     CDS             complement(<1..393)
                     /locus_tag="VIY07_01690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6380496.1"
                     /translation="MALLEISGLRKDFGGLRAVSDLSFELRNGEILGLIGPNGAGKTT
                     VFNLITGFIPPTEGRVLLEGQSLIGLRPYAIVKKGIARTFQIVKPFRNLSVLENVTLA
                     TFLHEPSRSKAETKAMVTLRRVALAEKHA"
     gene            complement(399..1346)
                     /locus_tag="VIY07_01695"
     CDS             complement(399..1346)
                     /locus_tag="VIY07_01695"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380497.1"
                     /translation="MKRLLVVAGIAFLLVAPLLTSNAFFQHLMIMVLFWTLLGASWNL
                     LGGFAGQVSFGHAAFLGIGAYTTMLFYLSLQLSPWLGMLAGGVFAALFALPIGLICFR
                     LRGPYFSLATLAVAEIVRLVALNWEQLTAGPVGLLITTLPQVSIAGHAINWESKIPFC
                     YLAATLTLFAMGLTYVVSRSRLGAYLTAVREDIDSAEAIGIDTVRTRVIALVLSAFVV
                     GLAGSFYALYFRYIDPDAVFAISLSVEMVFIAVVGGLATTAGPIVGAVVLVTISEIFR
                     DRFAAGHLIFYGLFMMLVIRYLPEGIWGRLRLLLRLTRG"
     gene            complement(1343..2209)
                     /locus_tag="VIY07_01700"
     CDS             complement(1343..2209)
                     /locus_tag="VIY07_01700"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380498.1"
                     /translation="MEIFAQSVVSGVLTGSLYAMIAVGLTIVFGVMRIINLAHGEMVM
                     LGMFGAYWSYTLLGIDPFLSIVIWAPAMFAGGMLIHRFLLKDVIPRGELNTLLYTAGL
                     SLLVANLALFFFTGDYRTLNLPYALMPARPFGIAVPIPLAIAFVMAIAITLGLYLLLS
                     RTDIGRAIRATAQNPQSAALMGVSVLRIDMITFGLGTALAAAAGVLLVPSLYLYPTVG
                     EILIVKCFVIVVLGGLGSVPGAIAGGILLGLVESLGAVYVSVAYKDTIGFVLFLLVLL
                     FRPSGLFGVGRS"
     gene            complement(2266..3501)
                     /locus_tag="VIY07_01705"
     CDS             complement(2266..3501)
                     /locus_tag="VIY07_01705"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380499.1"
                     /translation="MSYKAKLLAALSLSLALSSGALAQSTLKIGAPQPMTGPDAPFGD
                     KFQKAYSMAVEEINAKGGINGRNIEVIIEDHQAKNPLAATVAEKLITQHQVLVLTGGR
                     ASGQAVEIASVAQRLKTPYMVDHPSADIITSKGFEWVFRNNPTGSIYPEAFNKFIIEV
                     PNALPKSAAVVYDNTVFGKTIANSAMTFLKSKNVPIVNDEAYPVNSLDFKPIMTKVKA
                     NNPDYVLLVAVSTTDAILMTRHAKEIGITPRAFVGFGGGFGVVDFAKQLGPLAENVFS
                     SAAWSGNPNEPATKEFYDKFKAKYGFLPKEHEVEGYAAIYIIADALKRAKLTGNVDAD
                     RETVRQSLLQTDMTTVFGKIKFANWEGPLGDKYTNQNAYSRDHSVLAQWNAKGELLNV
                     WPKSNAETDYVFPDKALVR"
BASE COUNT          819 a         1038 c         1109 g          645 t
ORIGIN      
        1 ggcatgtttt tcggcgagcg cgacacgtcg aagcgtcacc atcgctttgg tttcagcttt
       61 cgagcgactg ggctcatgca ggaaagtggc aagcgtgaca ttctccagca ccgaaaggtt
      121 gcggaacggt ttgacgatct ggaaggtgcg agcaatgcct tttttgacaa tggcgtaagg
      181 cctcaatccg atcaggcttt ggccttcaag cagcacccga ccttcagtcg gcggaatgaa
      241 gccggtgatc agattgaaga cggtcgtctt gcccgcgccg ttcggcccta tcaacccgag
      301 gatttcgccg tttcgcagtt cgaaggacag atcggaaacg gcacgcaggc cgccgaaatc
      361 tttccgcaag ccggatatct cgagcagcgc catggcattc atccgcgcgt gagccgcagc
      421 aacagccgca gccggcccca gatgccctcc ggcagataac ggatcaccag catcatgaag
      481 agcccgtaaa aaatcagatg accggcggca aaacggtcgc gaaaaatttc gctgatggtg
      541 acaagaacga ccgcgccgac gatcgggccc gcggtcgtcg cgagcccgcc gaccaccgcg
      601 atgaacacca tttccaccga gagcgaaatg gcaaacacgg catcgggatc aatgtaacga
      661 aaatatagtg catagaagct gccggcgagg ccgacgacaa aggccgagag gaccaaagca
      721 atgacgcgcg tgcgcacagt atcgatgcca atcgcctcgg cactgtcgat atcctcccgc
      781 accgccgtga gataggctcc aagccgcgac cgcgagacga cgtaggtcag tcccatcgcg
      841 aacaaagtga gtgtggcagc gaggtagcaa aacggaatct tgctctccca attgatcgca
      901 tggcccgcga ttgaaacctg cggcagggtg gtgatgagca gcccgaccgg accggccgtg
      961 agctgttccc aattgagtgc caccaggcgg acaatttcgg caaccgccag cgtcgcgagt
     1021 gaaaaatagg gcccgcgcaa gcgaaagcag atgagcccga taggcagcgc aaacagcgcg
     1081 gcgaagacac cgccggccag catgccgagc cagggcgata gctgcaaact caggtagaac
     1141 agcatcgtcg tataggcgcc gatgccgagg aaagcggcgt gcccaaacga gacttgtccg
     1201 gcaaagccgc cgagcagatt ccaggatgcc ccgagcagcg tccagaacag caccatgatc
     1261 atgagatgtt ggaagaacgc attgctggtg agcaacggtg cgaccagcag gaacgcgatc
     1321 ccagccacga cgagcaggcg cttcatgacc ggccaacccc gaacagcccg gatggccgga
     1381 acaggaggac cagcaggaac agcacaaagc cgatggtgtc tttgtaggca accgaaacgt
     1441 agacggcgcc aagcgattcg accaagccga gcaggatgcc gccggcgata gcgccgggca
     1501 ccgagccaag cccacccagt acaacgatga cgaaacattt gacaatgagg atttcgccga
     1561 ctgtcggata aaggtaaagc gagggcacca ggagcacgcc agccgcagca gcgagcgcgg
     1621 tgccaagccc gaaggtgatc atgtcaattc ggaggacact cacccccatc agtgccgcgg
     1681 attgggggtt ctgcgcggtg gcgcggatcg cgcgtccaat gtcggtgcgc gaaagcagca
     1741 gatatagccc gagcgtgatc gcgatcgcca tgacgaaggc gatcgcgagc gggatgggaa
     1801 ccgcgatgcc gaagggccgc gccggcatca gcgcataagg aaggttgagc gtccgatagt
     1861 cgccggtaaa gaaaaatagc gcgagattgg cgaccaagag tgagaggccg gcggtgtaaa
     1921 gcagtgtgtt gagctcgcct cttggaatca catccttgag cagaaagcgg tggatcaaca
     1981 tgccgccggc aaacatcgcc ggtgcccaga tcacgatcga aagaaaagga tcgatgccca
     2041 gcagtgtgta ggaccaatag gcgccgaaca ttccgagcat caccatctcg ccatgcgcca
     2101 gattgatgat gcgcatgacg ccgaacacaa tggtcagccc gacggcgatc attgcgtaaa
     2161 gcgagccggt taggacgccg ctgacgacgc tctgggcaaa gatttccatc ttggattcaa
     2221 gaaaaatccc cgcccggttc acgggcgggg attagacgat gccattcagc gtaccagcgc
     2281 cttgtcggga aagacatagt ccgtttcggc gtttgacttc ggccatacat tgagcagttc
     2341 gcccttggca ttccactgcg cgagcacgga gtgatcgcgc gagtaggcgt tctggttcgt
     2401 gtacttgtcg ccgagcgggc cttcccagtt ggcgaacttg atcttgccaa acacggtggt
     2461 catgtcggtc tgcagcagtg actggcgcac ggtctcgcgg tcggcatcca cgttaccagt
     2521 gagcttggcg cgcttgagcg cgtccgcgat gatgtagatg gcggcgtagc cctccacctc
     2581 atgctccttg ggcaggaagc cgtatttagc cttgaacttg tcgtagaact ccttggtcgc
     2641 gggttcgttg ggattgcccg accaagccgc ggacgagaag acgttttccg ccaacggacc
     2701 gagctgtttg gcaaagtcga cgacgccgaa gccaccgccg aagccgacga aagcgcgcgg
     2761 cgtgatgcca atttccttgg cgtgacgggt catcaggatc gcgtcggtgg tcgacaccgc
     2821 gaccaagagg acgtaatcgg gattgttcgc cttgaccttg gtcatgattg gcttgaagtc
     2881 gagcgagttg accggatagg cctcgtcgtt gacgatcggc acgttcttcg acttgaggaa
     2941 ggtcatcgca gaattggcga tggtcttgcc gaagaccgtg ttgtcgtaaa ccaccgctgc
     3001 cgattttggc agggcgttcg gcacctcgat gatgaattta ttgaacgctt ccggatagat
     3061 cgagccggtc gggttgttgc ggaacaccca ctcgaacccc ttcgacgtga tgatgtcggc
     3121 ggacgggtgg tcaaccatgt agggggtctt caaccgctgc gcgaccgaag cgatctcgac
     3181 tgcttgtccg gaggcccgac cgccagtcag cacgagcacc tggtgctgcg tgattagttt
     3241 ctccgccaca gtagccgcga gcgggttctt cgcctgatgg tcctcgataa tgacttcgat
     3301 gttgcgtccg ttaatgccgc ccttcgcatt aatttcttcc acggccatcg aataggcctt
     3361 ctggaatttg tctccgaacg gagcatcggg ccccgtcatc ggctgggggg cgccgatctt
     3421 gagcgtgctt tgcgccagcg cgcctgagga aagcgcaagc gaaagcgaca atgccgcgag
     3481 caatttcgcc ttgtatgaca tgtatcctcc cggtggggtc attttggctt gtccgggggc
     3541 tgcccaacgc tcccgaaccg ccgcgaatat tggcactttt ccatgtcacc cgaaaggcgt
     3601 ctgcgcaggc c
//
LOCUS       DATDHO010000095         3853 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_400052, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000095 DATDHO010000000
VERSION     DATDHO010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3853
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400052"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            183..467
                     /locus_tag="VIY07_01710"
     CDS             183..467
                     /locus_tag="VIY07_01710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380500.1"
                     /translation="MVEFVGVCRYFAGELAINEMTQRALSELRQYLDSGTRTLLEGLR
                     HAGGADRSFRQSQVDAAVRICAKLFGREYAALLGKAAEVASAAEGKAARA"
     gene            576..1697
                     /gene="ccmI"
                     /locus_tag="VIY07_01715"
     CDS             576..1697
                     /gene="ccmI"
                     /locus_tag="VIY07_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HEY6380501.1"
                     /translation="MLLWLLFAVMTAAAVFAVLWPLGQAANVQAGSDIAVYRDQLDEI
                     ERDRNAGRIGEVDAQAARAEVSRRLIAAADAAEFAHSFPIGSAFWRRRATAIGAVVVL
                     PVVALTLYLAIGSPQLPGQPLNARLHAIHQDQSIASLVSKVEAHLERNPDDARGYEVL
                     APVYLRLGRFEDAVNARRKLLALNGENAERHSDLGEALTAAANGIVTSEAKSAFERSL
                     ALDPSQSKARFYTGIAAEQDGDRAQATAIWRDMINKAPAEAPWLPVVRDALARVGDDQ
                     PIASAPGPSSEDVAAARAMSEKDRGEMIRGMVARLADRLKENGNDVDGWQRLLRAYMV
                     LGERDKAHEAAADAKRALANDPDKLRRIEDMIKSLGLEG"
     gene            1708..2172
                     /gene="ccmE"
                     /locus_tag="VIY07_01720"
     CDS             1708..2172
                     /gene="ccmE"
                     /locus_tag="VIY07_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012169664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HEY6380502.1"
                     /translation="MTRKQRRLILIGTSLGVLAIAAALVLGALRDSIVFFNSPTDVAE
                     KRLVPGTRMRIGGLVKPGSVERGDSLLVRFSVTDGKTDIPVHYRGIVPDLFREGQGVV
                     AEGKLESGGMLAADTVLAKHDERYMPREVVDALKKSGRWQEGEAKNAGSNTK"
     gene            2169..>3853
                     /locus_tag="VIY07_01725"
     CDS             2169..>3853
                     /locus_tag="VIY07_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HEY6380503.1"
                     /translation="MIPELGHYALVLALALGMIQAIAPCVGARTNDPSLMQLAASTAI
                     MQFVFVGLAFLALVGCYVTSDFSVATVYENSHSMMPLIYKITSVWGNHEGSMLLWVLI
                     LSLFGALVGSFGKNLPSVLKAHVLAVQSWIACAFYLFILFTSNPFARLSQAPFEGRDL
                     NPILQDIGLAVHPPLLYLGYVGFSIAFSFAIAALIEGRIDAAWARWVRPWTLAAWMFL
                     TIGIAMGSYWAYYELGWGGFWFWDPVENASLMPWLAGTALLHSAVVMEKRNALKIWTI
                     LLAILVFSLSLIGTFLVRSGVLTSVHTFANDPARGVFILAILMLFIGGALILFAWRAP
                     TLKQGGLFAPISREGALVFNNLFLTTACLTVFVGTLYPLALEALTGEKISVGEPFFNL
                     TFAPLFVPLLIVMPFGPLMAWKRGDILGVAQRLFAAFGVAIVVLALTFIVEGGTSVLA
                     PLGIGLAFFIMIGAMTDIAERIGLFRVPLLAAWQRAIGLPRSVWGTALAHSGIAVTLL
                     GIVGVSTWASELIVAVKPKQAVSLSGYELAFEGLVQRSGPNYREAAARFTVREG"
BASE COUNT          694 a         1058 c         1205 g          896 t
ORIGIN      
        1 tggcgctgcc ggtggacagc acatggggcc gtacactcgc ggcacagaga acgcaaattt
       61 ccgattgctt cgcgccgaaa tagaggcccg ggcgcgtaca gcggctgctg cggccgcgaa
      121 caccgggaga aattcgtccg aattcggttc tcgatcggaa cgaagttgcc gaagtcgaag
      181 cgttggtcga atttgtagga gtctgccgat attttgccgg cgagctcgcc atcaatgaga
      241 tgacccagcg cgcgctgagc gagctgcgac agtatcttga cagcggcacg cgcacgctgc
      301 tcgaggggtt gaggcacgct ggtggcgccg accgtagctt ccggcaatcc caggtcgacg
      361 cagcagtccg aatttgcgcc aagttgtttg gccgggaata cgccgcactg ctgggaaaag
      421 ctgccgaagt ggcgagcgcc gcagaaggca aagcagcgcg cgcctgaagc ctgcttttct
      481 tgctccatac gcggaacttg cgcattgctg ccatgatcgg gcgtgatgta tgcccttgtc
      541 cggcgccctt ttttgcctgg cacgcggaag gccctatgct cctgtggctc ctatttgccg
      601 tgatgacagc cgctgcggtt ttcgctgttt tatggcctct gggccaggca gctaatgtgc
      661 aggcgggaag cgatatcgcc gtgtaccgcg atcaactcga cgaaatcgaa cgcgaccgca
      721 acgcggggcg gatcggagag gtcgatgccc aagccgcgcg agcggaagtt tcccggcgtc
      781 ttattgccgc agccgacgcc gctgaattcg cccattcgtt tccaatcggg tcggcgttct
      841 ggcgtcgcag agcgacagcg attggcgctg tcgtcgtgct gcctgtcgta gcgctgacgc
      901 tttatcttgc gatcggttcg ccgcagttgc cgggccagcc gctgaacgct cgattgcatg
      961 ccattcacca ggatcaatcg atcgccagcc ttgtgtcgaa agtcgaggcg catctggagc
     1021 gcaatccaga tgacgctcgc ggctacgaag tgctggcgcc cgtttatctc cgactcggcc
     1081 gtttcgagga cgcggtgaat gcccggcgca agctgctcgc gttgaacggc gaaaatgccg
     1141 aacgacattc cgatcttggt gaagccctga ctgcggctgc caatggcatc gttacatcgg
     1201 aggccaaatc ggcgttcgag cgctcgctcg cgctcgaccc cagccagtcc aaggcgcggt
     1261 tttacacggg catcgccgct gagcaggacg gcgatcgcgc gcaggcgact gcgatctggc
     1321 gcgatatgat caacaaagcg ccggctgaag cgccctggtt accggtggtg cgcgatgcac
     1381 ttgcgcgcgt gggagacgat caacccatag cgtcggctcc agggccaagt agcgaagacg
     1441 ttgccgccgc gcgtgccatg agcgaaaagg atcggggaga aatgatccgc ggcatggtcg
     1501 cccgtctcgc cgatcgcctg aaggagaatg gaaacgacgt tgatggatgg caacgactgt
     1561 tgcgcgccta tatggtgctg ggggaacgag acaaagcgca cgaagccgct gccgatgcca
     1621 agcgcgcact cgccaatgat cccgataagc tccgccggat cgaagacatg atcaaaagtc
     1681 tggggcttga aggctgaacg aggcggaatg actcgcaagc aacgacgact gattctgatc
     1741 ggcacaagct tgggtgtact tgcgatcgct gcggcgctgg tgctcggcgc gttgcgtgat
     1801 tccatcgtgt tcttcaattc gcccaccgat gttgccgaaa aacgtctcgt gcccggcaca
     1861 cgaatgagga ttggcggact ggtgaagcca ggaagcgtgg aacgcggcga tagtctgctg
     1921 gtgcgcttct cggtgaccga cggaaaaacc gacatccctg tacactatcg aggcatcgtt
     1981 ccggacctgt ttcgggaagg gcagggggtc gtggcagaag gtaaactcga atctggcgga
     2041 atgcttgccg ccgatacggt tcttgccaaa cacgatgagc gttatatgcc gcgtgaggtt
     2101 gtagacgcgc tgaaaaagag cggacgatgg caggagggtg aagccaaaaa cgcggggagc
     2161 aataccaaat gattcccgag ctggggcatt atgctttggt gctggctctt gcgcttggaa
     2221 tgatccaggc gattgcgccg tgtgtcggcg cgcgcaccaa tgacccctcc ttgatgcagc
     2281 ttgctgcctc gactgcgatc atgcagttcg tgtttgttgg gctcgccttc ctggcgttgg
     2341 tcggttgcta tgtgacatcg gatttttcgg ttgcgacggt ttacgaaaat tcgcactcga
     2401 tgatgccgct gatctacaaa atcaccagcg tatggggaaa ccacgaaggt tctatgcttt
     2461 tgtgggtgtt gatactgtcg cttttcggcg cgcttgtcgg cagtttcggc aagaatttgc
     2521 cttctgtgct gaaagcgcat gtgctcgcgg tgcaatcgtg gatcgcttgc gcgttctatt
     2581 tgttcattct gtttacatca aatcctttcg cgcggctttc acaggcgccg ttcgaggggc
     2641 gcgaccttaa tccgattctg caggacatcg gcctggccgt tcatccaccg ctgctttacc
     2701 tcggttatgt cgggttctcg attgcgtttt cgtttgccat agctgcgctg atcgaagggc
     2761 gcattgatgc tgcttgggcc cgctgggttc ggccgtggac gctggcagcc tggatgtttc
     2821 tcaccatcgg catcgcgatg ggctcgtatt gggcttatta cgaactcggc tggggtgggt
     2881 tctggttctg ggaccctgtg gagaacgctt cgctgatgcc gtggcttgcc ggcaccgctc
     2941 ttttgcattc ggcggtggtg atggagaagc gaaacgcgct gaagatctgg actattcttc
     3001 tcgcgatact cgtattctcg ctttcgttga taggcacctt cctggttcga tcaggtgtac
     3061 tcacgtcagt gcatactttt gccaatgatc ccgcgcgtgg tgtcttcatc ctggccattc
     3121 tgatgctgtt catcggtggt gctttgatcc tgtttgcgtg gcgcgcgccg acgctcaaac
     3181 aaggaggttt gtttgccccg atttctcgtg agggcgcgct cgtgttcaac aatctttttc
     3241 tgaccaccgc ctgtctgacg gttttcgtcg gcacacttta ccctttggcg ctcgaggcgc
     3301 ttaccggtga aaagatttcc gtcggtgaac cgtttttcaa tctcaccttt gcgccgctct
     3361 ttgttccgct gctgattgta atgccgttcg gtcccctcat ggcctggaaa cgaggcgaca
     3421 ttcttggcgt ggctcaacgc ctgttcgccg cgtttggcgt tgccattgtt gtcttagcgc
     3481 tgacattcat tgtggaaggc ggaacatcag tcttggcacc attaggcatc ggccttgcct
     3541 ttttcataat gatcggggcg atgaccgata ttgctgaacg catcggattg tttcgcgtgc
     3601 cattgttggc ggcatggcag cgggcgatcg gtttgccccg ctctgtttgg ggcacggcgc
     3661 tggcgcattc ggggattgcg gtcacattgc tcgggatagt gggtgtgagc acctgggcga
     3721 gcgaactcat cgtggcggtc aagccaaagc aagccgtgtc gctttccgga tatgagctag
     3781 cgttcgaagg ccttgttcaa cgctccggac caaactatcg cgaagccgct gcgcgattta
     3841 cggtgcgcga ggg
//
LOCUS       DATDHO010000096         1687 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_152631, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000096 DATDHO010000000
VERSION     DATDHO010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152631"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..309)
                     /locus_tag="VIY07_01730"
     CDS             complement(<1..309)
                     /locus_tag="VIY07_01730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013499888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6380504.1"
                     /translation="MNEARLVSLVVESSSKRTIAVRTRGGKSPGLFWLGGFKSDMKGT
                     KAEAFDRWAESEGRACVRFDYSGHGESGGAFTDGTISRWLEESVAVYLQFARDAQVLI
                     G"
     gene            480..>1687
                     /locus_tag="VIY07_01735"
     CDS             480..>1687
                     /locus_tag="VIY07_01735"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY6380505.1"
                     /translation="MSSLPASAAPPVKTGPNADADDIALRGKSRSPGAPHAPTTVLVV
                     VPTLDGGASDAAAVELVRILAGAGVAGIVVSRAGRLVADITQAGAEFLALDVSSNNPI
                     LMLRNAVVLTRLARERRCAAIHAFGRAGAWSALIAARLCRIPFLTSWHKGFREQNLFK
                     RLYNGIMARGDCVIASSEQIAQLINDRYGTPWSRITVVPCSIDLERFNPEAVSRERIV
                     TIRTAWGVKRETKVILISGRILRRKGHHVVVKAVKRLKEMGLKDFLCVFVGEDRGRSR
                     YTGELWDLVLTTGTMDVIRMASPVPDMPAAYAAASVVVSAAVQPEGVQRAILEGQAMA
                     RPVIVSDLGAGPDVVLTAPAVPESKIAGFRFNAGDDAALAAALLRLFSMPEQNRATIG
                     RRGREWVLEH"
BASE COUNT          311 a          513 c          527 g          336 t
ORIGIN      
        1 tccgatcagc acctgcgcgt cgcgtgcaaa ctgaaggtag acggccacgc tttcctccag
       61 ccagcggctg attgtcccgt cggtgaaagc tccaccggat tcgccatgac cggaatagtc
      121 gaaccgcacg catgcgcgcc cttcgctttc ggcccagcgg tcgaaggctt cagccttcgt
      181 acctttcatg tcggacttga aaccgccaag ccagaacagg cccgggctct tgcccccacg
      241 ggtccgaacg gcaatggttc tctttgacga agattctacg acgagagaga cgaggcgagc
      301 ttcattcatg gttgattcaa tggacgccgc tgagaccgcc ctttcttgtc tgcaagacac
      361 ccctgatgca agaggcaacc gttgcccatg ccatctgcgc cgtctatacc ttgaactcgc
      421 cacgcgccgt ttgaggcggg cagtcattca agttacactc ggttcgagat cacaaactaa
      481 tgtcgagctt gcccgcatcc gcagcaccgc ccgtcaaaac cgggcccaat gccgatgcag
      541 acgacattgc tttgcgcggc aagtcacgta gcccgggtgc accgcatgcc ccgactacgg
      601 tgcttgttgt cgtacccaca ctcgatgggg gcgcttcgga tgccgcggcc gttgagcttg
      661 tgcgcattct tgctggagcc ggggttgcgg gcatcgtggt gtcgcgcgcg gggcggctgg
      721 tagctgacat cacccaagcg ggagccgagt tcctcgcgct cgatgtttcg agcaacaatc
      781 ccattctcat gctgcgcaat gccgtcgttc tcacgcgact ggcacgagag cggcgatgcg
      841 cggcgattca cgccttcggc cgtgcgggcg cctggagcgc gctgatcgcc gcgcggttgt
      901 gcaggattcc gtttctgacc agctggcaca aaggcttccg tgaacagaat ctgttcaagc
      961 ggctttacaa cgggatcatg gcgcgcggag attgcgtcat agcgtccagc gagcaaatcg
     1021 ctcagctgat caacgatcgc tacggcacgc catggagcag gatcaccgtg gtaccctgca
     1081 gcatcgacct tgagcggttc aatccggaag ctgtttcgcg tgagcgcatc gtgaccatac
     1141 gcaccgcctg gggcgtcaag cgagagacca aggtcattct gatcagtggc cgcattctgc
     1201 gccgcaaagg ccatcacgtc gtcgtcaaag cggtgaagcg gctaaaggaa atggggttga
     1261 aggatttttt gtgcgtgttc gtgggcgaag accggggccg cagccgctac accggcgagt
     1321 tgtgggatct cgtgctgacg acgggcacca tggacgtcat tcggatggcc tcgccggtgc
     1381 ccgacatgcc ggccgcctac gccgctgcat cagtcgtggt ttcggcggca gtgcagccgg
     1441 aaggcgtcca gcgtgcaatt ctcgaaggcc aggcaatggc gcggcccgtt atcgtatccg
     1501 atcttggcgc gggtcctgac gtggtgctca ctgcgccggc ggtacccgaa agcaagatcg
     1561 cgggattccg tttcaatgcc ggggatgatg cggccctggc ggcggcattg ctgcggctgt
     1621 tctcaatgcc ggagcagaac cgtgcgacaa taggccgtcg cgggcgcgaa tgggtgcttg
     1681 agcattt
//
LOCUS       DATDHO010000097         6523 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_4010, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000097 DATDHO010000000
VERSION     DATDHO010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6523
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4010"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..431)
                     /locus_tag="VIY07_01740"
     CDS             complement(99..431)
                     /locus_tag="VIY07_01740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018012175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEY6380506.1"
                     /translation="MRDLARKLRRRATEAEKLLWSRLRARQLEGVKFRRQVPLFGFVV
                     DFAALESRLIIEIDGGQNAEAVDADAARTAILENAGYHVIRFWNNDVLNNINGVLEAI
                     AQELHLNR"
     gene            491..3790
                     /gene="carB"
                     /locus_tag="VIY07_01745"
     CDS             491..3790
                     /gene="carB"
                     /locus_tag="VIY07_01745"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEY6380507.1"
                     /translation="MPKRTDINSILIIGAGPIVIGQACEFDYSGTQACKALKDEGYRI
                     VLVNSNPATIMTDPDLADATYVEPITPEIVAKIIERERPDALLPTMGGQTALNCALSL
                     RKMGVLDKFNVKMIGATADAIDKAEDRELFREAMKRIGLPTPRSHQIKTLPQALEALD
                     DIGLPAIIRPSFTLGGTGGGIAYNKAEFIEIVERGIDASPTNEVLVEESVLGWKEFEM
                     EVVRDKKDNCIIICSIENVDPMGVHTGDSITIAPALTLTDKEYQILRDASIAVLREIG
                     VETGGSNVQFAINPADGRLVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     IANDITGGATPASFEPTIDYVVTKIPRFAFEKFPGASPVLTTSMKSVGEAMAIGRTFQ
                     ESLQKSLRSLETGLTGLDEVTIEGFDAAKGIDDTDNKAAIRAALGTPTPDRLLKVAQA
                     MRLGATDELIHNACRIDPWFLAEIRGLIEAESEIAAKGLPTTAGPLRRLKAMGFSDQR
                     LAKLTGTNADAVRTMRHKLNVRPVFKRIDTCAAEFASPTAYMYSTYEAPFVGTPSNEA
                     APSDKKKVIILGGGPNRIGQGIEFDYCCCHASFALKEAGYETIMVNCNPETVSTDYDT
                     SDRLYFEPLTPEDVLEIIDIERSNGTLHGVIVQFGGQTPLKLAEPLEKARVPILGTSP
                     DAIDLAEDRDRFKKLLDKLKLRQPKNGIATSPNAARAIAEEIGYPIVIRPSYVLGGRA
                     MEIVRDGAQLDRYVARLAGDLDRPTELVVSKKSPLLIDSYLSDATEVDVDCLSDGKDT
                     FIAGIMEHIEEAGIHSGDSACALPPHSLKEKTIAELERQTRALALALNVGGLVNVQYA
                     IKDGEIYVLEVNPRASRTVPFVAKVIGVPIAKIAARIMAGEKLKDFDLKSTRPRHRAV
                     KEAVFPFARFPGVDTVLGPEMKSTGEVMGIDGSFEIAFAKSQIGGGTSLPRSGTVFVS
                     VKDADKARILPAVKLLASLGFKTIATSGTQRFLAEQGVEAAKINKVLEGRPHIVDAIK
                     NGGVQLVFNTTEGAAALADSRSLRHAALLHKVPYYTTLSGAVAAAQGIKAYLEGDLEV
                     RTLQSYFGGRG"
     gene            4041..4514
                     /gene="greA"
                     /locus_tag="VIY07_01750"
     CDS             4041..4514
                     /gene="greA"
                     /locus_tag="VIY07_01750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEY6380508.1"
                     /translation="MEKIPMTAEGYAALESELKHCQQVERPRIIQQITDARTHGDLSE
                     NAEYHAAKEAQSINEGRIAELEDKLARADIIDVSKLSGDMITFGATVTLIDEDTDEKK
                     VWQIVGEPEADAKKGKISITSPLAKALIGKTKGTSVEVNTPGGAKAYAVKKIEWR"
     gene            complement(4632..5573)
                     /locus_tag="VIY07_01755"
     CDS             complement(4632..5573)
                     /locus_tag="VIY07_01755"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6380509.1"
                     /translation="MAFIGLLAAVGARAQDAYPSQNIRFVVPFTAGSATDTLARLVAN
                     RMSTTLGRSVFVENIAGGNGIPASQNVVRSAPDGYTVMITANTTHAGNQALFKKVPYD
                     AVADFEPITKLGTITLALVAHPSVPANDVKALIAYAKANPGKLTFGAGSSSSRMSAEL
                     LKTMAGIDMLYVPYKSNPQAVTDLLGGQISIFFGDVSTALPPVRAGKLKGFAVSGLKR
                     SPLAPDLPTIDESALKGYELTAWFAAYAPAKTPKPVVDKLNAAFREALADKDVSEKLL
                     AAGIEPEASTPDELRKFQAAETQKWKQIATDAKIEPE"
     gene            complement(5585..5971)
                     /locus_tag="VIY07_01760"
     CDS             complement(5585..5971)
                     /locus_tag="VIY07_01760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017405427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380510.1"
                     /translation="MMRTVRLQDIANARTGDKGNRLNLVLVCRNPADYSAVAAQVTAQ
                     RVAEAFAARKPSRVVRYDLPKLAAFNFVLDDVLEGGVNASIGLDGHGKSLSFLVLDMP
                     VLIAADAPHRARETETIAPGRSSLES"
     gene            complement(5968..>6523)
                     /locus_tag="VIY07_01765"
     CDS             complement(5968..>6523)
                     /locus_tag="VIY07_01765"
                     /inference="COORDINATES: protein motif:HMM:NF018938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HEY6380511.1"
                     /translation="IHDPSAYLAPDVILDLTDVEVAEIGKDQVRVRGARGRPAPETLK
                     ATVCFDSGLLGDAEISYAGPNAPARAQLAADVVRERLRKRVPRLEVRVDAIGVVSVLG
                     AGRSPADFRQAQANDVRLRFAAQSTDAKDVEMLLDEVEALYCAGPAGGAGVRRRITPR
                     LASASCLIERSYAQPRVTMLGARA"
BASE COUNT         1294 a         2049 c         2016 g         1164 t
ORIGIN      
        1 gccgggtggc gacaggacgc gcggtcagcg cgcccttttt ttgtgcctgg cttcttcccc
       61 ctctccctct ggggagaggg tcggggtgag gggcaccact aacggttgag gtgaagttct
      121 tgggcgattg cctcgagcac accattgata ttgttcaaga cgtcattgtt ccaaaaccga
      181 atgacgtgat agccggcgtt ttccagaatt gcagtacgag cggcatcggc gtcgactgct
      241 tccgcattct gtccgccatc gatttcgatg atcagtctgc tttcgagcgc agcaaaatcg
      301 acgacaaatc caaacagcgg tacctgccgc ctgaatttaa ctccctccaa ctggcgcgcg
      361 cgcagtcgcg accaaaggag cttctccgct tcggtcgctc gtctgcgcag cttgcgcgcg
      421 agatctcgca tcgtcagaac cccctcaccc caaccctctc cccgtcgggg agagggacat
      481 tttaagtagc atgcccaaac ggactgacat caactcgatc ctgatcatcg gcgccgggcc
      541 gatcgtgatc ggccaggcct gcgagttcga ctattccggc acgcaggcct gcaaggcgct
      601 gaaagacgag ggctacagga tcgtcctcgt gaattcgaat ccggcaacga tcatgaccga
      661 cccggatctc gccgatgcca cttacgtcga gccgatcacg ccggagatcg tcgccaagat
      721 catcgaacgg gaacggcccg atgcgctgct gccgaccatg ggcgggcaga cggcactcaa
      781 ttgcgcgctg tcgctgcgca agatgggcgt gctggacaaa ttcaacgtca agatgatcgg
      841 cgcgacggcc gacgccatcg acaaggcgga agaccgcgag ctgttccgtg aggccatgaa
      901 gcggatcggg ctgccgactc cccgctcgca ccagatcaag acattgccgc aggcgctcga
      961 ggccctcgac gacatcggcc tgcccgcgat catccggccc tccttcacgc tcggcggcac
     1021 cggcggcggc attgcctaca acaaagccga gtttatcgaa atcgtcgagc gcggcatcga
     1081 tgcttcgccc accaacgagg tgctggtcga ggagtcggtg ctgggctgga aagagttcga
     1141 gatggaggtg gtgcgcgaca agaaagacaa ctgcatcatc atctgctcga tcgagaacgt
     1201 cgacccgatg ggcgtgcaca cgggcgactc gatcacgatc gcgccggcac tgacgctcac
     1261 cgacaaggag taccagatcc tgcgcgacgc ctcgatcgcg gtgctgcgcg agatcggcgt
     1321 ggaaaccggc ggatcgaacg tgcagttcgc catcaacccc gccgatggac ggctggtggt
     1381 gatcgagatg aatccgcgcg tgtcgcgctc gtccgcgctc gcatccaagg cgaccggctt
     1441 tcccattgcc aaggtcgccg caaagctcgc tgtcggctac acgctcgacg agatcgccaa
     1501 cgacatcacg ggtggcgcaa cgcctgcatc gttcgagcca acgatcgatt acgtcgtcac
     1561 caagatcccg cgctttgctt tcgagaagtt tcccggggcc tcgccggtcc tcaccacctc
     1621 gatgaagtcg gtgggcgaag cgatggcgat cggccgcacc ttccaggaga gcctgcagaa
     1681 gtcgctgcgc tcgctggaaa caggtctcac cggcctcgac gaggtgacga tcgaaggctt
     1741 cgacgctgcg aagggcattg acgacaccga caacaaggcc gccatccgcg cggcgctcgg
     1801 aacgcccaca ccggaccggc tgctcaaggt ggctcaggcc atgcgcctcg gcgcaacgga
     1861 tgaactgatc cacaatgcct gccgcatcga cccctggttt ctggccgaaa tccgcgggct
     1921 gatcgaggcc gaatccgaaa tcgccgcgaa gggtcttccc accaccgccg gccccctgcg
     1981 ccggctcaag gcaatgggct tttcggacca acggcttgcc aagctgaccg gcaccaatgc
     2041 ggatgccgtg aggacaatgc gccacaagct gaacgtgcgg ccggtgttca agcgcatcga
     2101 tacctgcgcc gccgagttcg cttcccccac tgcgtacatg tattcgacct acgaggcgcc
     2161 atttgtcggg acgccgtcga atgaggccgc gccttcagac aagaagaagg tgatcattct
     2221 cggcggtgga cccaatcgca tcggccaggg gatcgaattc gattactgct gctgccacgc
     2281 cagcttcgcg ctgaaggaag cgggctacga aaccatcatg gtcaattgca atccggaaac
     2341 cgtgtcgacc gattacgaca cgtctgaccg gctgtatttc gagccgctca cgccggaaga
     2401 cgtgctggaa attatcgaca tcgagcggtc gaacggcacg ctgcacggcg tgatcgtgca
     2461 attcggcggc cagacgccgc tcaagctcgc cgaaccgctg gaaaaagcca gagtgcccat
     2521 cctcggcacc tcgcccgatg cgatcgatct tgccgaggat cgcgatcgct tcaagaagct
     2581 gctcgacaag ctcaagttgc gccagccgaa gaacggcata gcgacctcgc cgaacgccgc
     2641 acgcgcgatc gcggaagaga tcggatatcc aatcgtcatc cgcccgtcat acgtgctcgg
     2701 cggccgcgcc atggaaattg tgcgcgatgg cgcgcagctc gatcgatacg tcgcgcgcct
     2761 tgcgggcgat ctcgaccggc cgactgagct tgtggtgtcg aaaaagagtc cgctgctcat
     2821 cgacagctac ctctccgatg cgaccgaggt ggatgtcgat tgtctgtccg atggcaagga
     2881 taccttcatc gccggcatca tggagcacat cgaggaagcc ggcattcatt ccggcgactc
     2941 cgcctgcgcc cttccgcccc attcgctgaa agagaaaacc atcgccgaac tcgaacgcca
     3001 gacccgcgca ctggccctcg cgctcaacgt cggcggactg gtgaacgtgc aatacgccat
     3061 caaggatggc gagatctatg tgctcgaagt gaacccacgc gcctcgcgga ccgtgccgtt
     3121 cgttgccaag gtcatcggcg ttccgatcgc aaagatcgcg gcccggatca tggccggcga
     3181 aaagttgaag gacttcgatc tgaaatcgac ccggccgcgg catcgcgccg tgaaggaagc
     3241 cgtctttccg ttcgcgcgtt ttcccggagt cgataccgtg ctggggcctg agatgaaatc
     3301 caccggcgag gtcatgggga tcgacggctc gttcgaaatc gccttcgcaa aaagccagat
     3361 cggtggcggc accagcctgc cgcggagcgg aaccgttttc gtctcggtaa aggatgccga
     3421 caaggcgcgc atcttgccgg ccgtgaaact cctggcctcc ctcggtttca agaccatcgc
     3481 aacgtcggga acccaacgtt ttctggcgga acagggggtc gaggccgcca agatcaacaa
     3541 ggtattggaa ggccggcccc acatcgtgga tgccatcaaa aacggcggcg ttcagctggt
     3601 tttcaatacc accgaggggg ccgcggcgct ggccgacagc cggtcgctgc gccacgccgc
     3661 cctcttgcat aaagtgccgt actacaccac tctttctggg gccgtcgccg cggcgcaggg
     3721 catcaaggcc tatctggagg gtgacctcga ggtacgcacg ctgcaaagct acttcggcgg
     3781 ccggggctga aggcttttgg ccgacaagac ccgggtgacg gcacgagtga cgccggaaag
     3841 ttcatggtcg cggcatcagg tgaggctggc cgcgacggga cttttttgac cggacctcgt
     3901 tgacatgact ccggtatcgc gggtgaccgt ggccggagtc gtattgcgag tcgatttgac
     3961 gggatttgaa atgaaagggg cttggcggcg ctgatggtcg ttcagcttgt ttcgggcgcc
     4021 cgccaggagg agatgagacg atggaaaaaa taccgatgac cgccgagggc tatgccgcgc
     4081 tcgagtccga gctcaagcat tgccagcagg tcgagcggcc ccgcatcatt cagcagatca
     4141 ccgatgcgcg cacgcacggc gatctgtcgg agaatgccga gtaccacgcg gccaaggagg
     4201 cgcagtcaat taacgaaggc cgtatcgccg agctcgagga caagctcgcg cgcgccgata
     4261 tcatcgacgt ttcgaaattg tcgggagata tgatcacctt cggagcgacg gtcacgctca
     4321 tcgacgagga taccgacgag aagaaggtgt ggcagatcgt cggcgagcca gaggctgacg
     4381 cgaagaaagg gaagatctcc atcacctcgc cgctcgcgaa agcgctgatc ggcaagacca
     4441 agggcacctc ggtcgaggtc aacacacccg gcggcgccaa ggcctatgcc gtgaagaaga
     4501 tcgagtggcg atagcgaagg gtattcgcac catttcataa aacaaatccg ttcgtcgccg
     4561 cgaaagcggg gacccagact ttatgaacgc aaatctggat ttccgcttac gcggaaatga
     4621 acggatgtcg ctcactccgg ctcgatcttg gcgtcggttg cgatctgctt ccacttctgc
     4681 gtttcggcag cctggaattt tctcaactca tccggcgtgc tcgcttcggg ctcgatgccg
     4741 gccgcgagca gcttttcgga tacgtccttg tcggcgagcg cctcgcggaa cgccgcattg
     4801 agcttgtcga cgacaggctt gggcgttttc gccggtgcat aagccgcgaa ccaggcagtc
     4861 agctcgtagc ctttaagcgc ggactcatcg atcgtcggca ggtcgggcgc gagcggcgag
     4921 cgcttgagtc ctgacactgc aaagcccttg agcttgccgg cgcgcaccgg cggcagcgcg
     4981 gtcgagacgt cgccgaagaa gatcgaaatc tgcccgccga gcagatcggt cacggcctgc
     5041 gggttgctct tgtaaggcac gtagagcatg tcgatgcccg ccatcgtctt cagcagttcg
     5101 gccgacatgc gtgacgacga cgagccggcg ccaaatgtga gcttgccagg gttggccttc
     5161 gcgtacgcga tgagcgcttt gacatcgttt gcgggcaccg acggatgcgc caccagcgca
     5221 agcgtgatcg tgccgagttt ggtgatcggc tcaaaatcag ccaccgcgtc gtaaggcact
     5281 ttcttgaata aggcctgatt tccagcatgc gtcgtgtttg cggttatcat cacggtgtag
     5341 ccatccggcg cggagcgcac gacgttttgc gatgccggaa tgccgttccc gcccgcaatg
     5401 ttttcgacaa aaacactgcg gccgagggtc gtcgacatgc ggttggcaac caatcgcgcc
     5461 agcgtgtcgg tcgcgctgcc cgctgtgaag ggcaccacga agcgaatgtt ctgtgacgga
     5521 taggcgtcct gcgcacgtgc gccgaccgcg gccagcagcc ctatgaaggc caatacactc
     5581 gcgatcagct ttctaatgat gacctccctg gagcgattgt ttctgtttcc cgcgcgcggt
     5641 gcggcgcgtc ggccgcgatc aagaccggca tgtcgagcac caggaacgac agcgacttgc
     5701 cgtggccgtc gagaccgatg ctggcattga cgccgccttc gagcacgtcg tcgagaacga
     5761 agttgaatgc ggcgagcttg ggcaggtcgt agcgcacgac gcgagatggc ttgcgcgccg
     5821 cgaaagcttc ggccacgcgt tgggccgtca cttgcgctgc caccgcggaa tagtcggccg
     5881 gattgcggca aaccaggaca agattgagcc ggttgccttt atcgccggtg cgcgcattgg
     5941 cgatgtcctg caggcggacc gtgcgcatca tgcccgcgct cccaacatgg tgacacgcgg
     6001 ctgcgcgtag ctgcgctcga taaggcagga cgcgctggca aggcgcggcg taatgcgccg
     6061 gcgcacccct gccccgcccg ccggcccggc gcaataaagc gcctcgacct catcgagcag
     6121 catttcgaca tccttcgcat cggttgattg cgcggcgaac cgcaggcgta cgtcgttcgc
     6181 ctgcgcttga cgaaaatccg ccgggctccg ccccgcaccc aacacgctca cgacgccgat
     6241 cgcatcgacg cgcacctcca gcctcggaac gcgcttgcgc aaacgctcgc gaacgacatc
     6301 cgctgcgagc tgcgcgcgag ctggtgcgtt ggggccggca taggaaattt ccgcgtcccc
     6361 cagcagtccg ctgtcgaagc agacagtagc ctttaacgtc tcgggcgccg gtcggccgcg
     6421 cgcgccgcgg acgcgcacct gatccttgcc gatttcggca acctctacgt cggttaggtc
     6481 gagaatcaca tcgggcgcga ggtaggccga tgggtcatgg atc
//
LOCUS       DATDHO010000098         4872 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_449107, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000098 DATDHO010000000
VERSION     DATDHO010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4872
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449107"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..520)
                     /locus_tag="VIY07_01770"
     CDS             complement(29..520)
                     /locus_tag="VIY07_01770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY6380512.1"
                     /translation="MTTTTMSGSPVQVNVRAAAGVNDSILAIGRILIALIFVSSGIEK
                     FMDLGATASAIGSKGLPYPNILAVLTAILETGGGLLIIVGWQTRIAALALVIFSAIAA
                     YYFHDFWNQTGAQHTNNMIHFMKNVSMIGGLLMLCAAGAGRYSLDGPCIREIPGLSQP
                     QGQ"
     gene            683..1506
                     /locus_tag="VIY07_01775"
                     /pseudo
     CDS             683..1506
                     /locus_tag="VIY07_01775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969774.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
     gene            complement(1513..2736)
                     /locus_tag="VIY07_01780"
     CDS             complement(1513..2736)
                     /locus_tag="VIY07_01780"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HEY6380513.1"
                     /translation="MGVSIADIEAARRVIENVVLRTPMLPAPKLSALTGAEVYVKYEN
                     LQVTNSFKDRGALVKLASLSEAERKRGVITMSAGNHAQAVAYHASRLGIPSTIVMPVT
                     TPFVKIAATRSHGAEVVLHGESVAEAQPRCEQIMAQRGLVLVHPYDDYGIIAGQGTIA
                     LEMLEEVPELDVLVFPIGGGGLIAGNAIAGRAKNPAIEIVGAEAALYPSVWNALRGDN
                     RPLGGSTLAEGIAVKNVGKLTLPLIRELVADIILVDEADLERAVNAYLTLQKTMAEGA
                     GAAGLAAMFAKPERFEGKKVGLVLCGGNIDPRVLASIMVRELERENRIVSFRLTIPDQ
                     PGVLGIIATRIGGLGANILEVDHRRLFLDVPAKGAKLDVTIETRDAGHAEEIMAALAA
                     DGYAPVLIEARWATK"
     gene            2884..3402
                     /locus_tag="VIY07_01785"
     CDS             2884..3402
                     /locus_tag="VIY07_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEY6380514.1"
                     /translation="MSMDIKPHAYDPVAQPELFEGVLARRVIAFIIDFIVISIPVVLA
                     AMFIFAFGIVTLGLGFALYWLLPSATVIWAILYFGFTLGSPASATIGMRVMDLEMRTW
                     YGAPAYFVLGAVHAIAFWFTISFFTPLILLVPFFNERRRLLHDILLGTVIVNNSARAS
                     YLRGAMQPVRTG"
     gene            3470..4219
                     /locus_tag="VIY07_01790"
     CDS             3470..4219
                     /locus_tag="VIY07_01790"
                     /EC_number="2.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004057 - arginyl-tRNA--protein
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016598 - protein arginylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginyltransferase"
                     /protein_id="HEY6380515.1"
                     /translation="MTQHSRDTPQFYLTAPSPCPYLEGHEERKVFTHLVGDRAGELND
                     LLTHGGFRRSQSIAYRPACEGCRACVSVRVVAPDFEPSRNMRRIAERNADIVGEMRSP
                     APTSEQYSVFRAYLDARHRDGGMADMTVLDYAMMIEDSHVDTRLVEYRRRGPDTGING
                     RGAGQMLAVALTDVLSDGLSMVYSFFDPDQADRSLGTFMILDHIERARRMGLPYVYLG
                     YWVPGSRKMDYKGRFLPQERLMPSGWSRVER"
     gene            complement(4225..>4872)
                     /locus_tag="VIY07_01795"
     CDS             complement(4225..>4872)
                     /locus_tag="VIY07_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEY6380516.1"
                     /translation="MPHNLYLHSGVVQTRRFGTSVEDRREAIKLATIDSTIALMFALL
                     INASILILAAATFHKTGRHDVAELEQAHAFIAPLLGSAIAPTLFGIALLCCGLNSTVT
                     ATLSGQIVMEGFIDIRLPGWARRLLTRAIAIVPAAIVTIWFGSQGTAQLLILSQVVLS
                     LQLPFAIVPLVMFTADRKKMGQLVAPRWVTLLAVITAAVIICLNIKLLVDFALGS"
BASE COUNT          968 a         1503 c         1422 g          979 t
ORIGIN      
        1 gtgcgcgaat tgctgcaacc ccttgatctt attgcccctg cggttgggac aaacccggaa
       61 tctcgcggat gcagggtccg tccagggaat agcgaccggc tccggcggcg cacagcatca
      121 acaagccacc gatcatgctc acattcttca tgaaatgaat catgttgttg gtgtgctgcg
      181 cgccagtctg attccagaag tcatggaagt agtaggccgc gatggcgctg aagatgacga
      241 gtgccagggc cgcaatccgg gtctgccacc cgacaataat cagcagacca ccgcccgttt
      301 ccaggatcgc ggtcagaacg gcgagaatgt tcggatacgg caggcccttc gagccgatcg
      361 cggaggctgt cgcaccaaga tccatgaatt tttcgatgcc cgagctgacg aaaataagcg
      421 cgatgaggat acggccgatc gccagaatcg aatcgttgac gccagccgcg gcacggacgt
      481 tcacctgcac tggactgcca ctcatagtgg tcgtggtcat agggtcgctc cctgggtgaa
      541 ttcgcatgaa aacgcgctgt acggcgagcg gttcctgccg aagccggcaa gaccgaccat
      601 gacgaaaata cttccacgca ttaatcttgt cggtgattcg aattatccag cgccgtattg
      661 cgttcccgcc gaggagattt tcatgcgcaa tgtcggacgc aagcttgcct tcgtgctggc
      721 cgcatccaat cacggcacga tgatcaccaa ccggttcgac taccgcataa gcggacacca
      781 tgcgggcatc ggggtaggct tccagttgct cgaagcgggt gccttcgatc ccatcgaggt
      841 tgaactcgcg ctccaactga tcgaatcccg tcgccgaatt cacggtgctg gcgtggtggc
      901 gatcgactgc ggcgccaata tcggcatcca cacgatcgaa tgggcaaccg caatgaccgg
      961 gtggggatcc gtcatcgcga tcgaggcaca ggagcgaatt tactatgcgt tggcaggcaa
     1021 catcgctatc aacaactgct tcaacgccat cgccatgcat gccgcggtgt catcggaacc
     1081 aggcatcatg cagattccga cgcccgacta cttcgtgcct tcaagcttcg gcaacctcga
     1141 gctgaaaccc cgcgtggaca ctgagttcat cggccaacca tcgactactc accctcaaag
     1201 accgtcgcaa tccagaagat ctcgctcgac gcgctcgctt tgccgcgcgt tgatatgatc
     1261 aagctcgata ttcagggcat ggagctggag gcgcttgagg gggcgcggaa tacaatcgag
     1321 cgcagccacc cgatcatcct ggtggaatcg atcaaggcgg ggcgggagcg cctacgtgct
     1381 tttctcgatg aacgcggcta caaggtcgtc gacgctggcc ccaaccttct ggcgatccat
     1441 aaagccgatc ccgtcgtcgg cgaactgcag ttaccggaac tgcccgcgca gtcgtccgcc
     1501 gcctgacggt tcttactttg ttgcccaacg tgcctcgatc agaaccgggg catagccgtc
     1561 ggcggccaat gccgccatga tctcctcggc atgaccggca tcacgggttt ctatggtcac
     1621 atcgagcttc gcgcccttcg cgggaacatc gaggaaaagg cggcggtgat cgacttcgag
     1681 aatatttgcg ccgaggccgc cgatgcgcgt cgctatgatg ccgagaacgc caggctggtc
     1741 cgggatggtc aggcggaacg acacgatccg gttctcacgc tcaagctcgc gcaccatgat
     1801 tgaagcgaga acgcgcgggt cgatattgcc gccgcataaa acgagaccga ctttcttgcc
     1861 ctcgaaacgt tccggtttgg cgaacatggc agccagacca gccgcgccag cgccttctgc
     1921 catggttttt tgaagcgtca gataggcatt caccgcgcgt tcgagatctg cctcatcgac
     1981 caggataatg tcggcgacca gttcacgaat gaggggcagg gtcaacttgc cgacgttctt
     2041 aacggcgatg ccctcggcca gggtcgaccc accgagcggt cgattgtctc cgcgaagcgc
     2101 gttccacact gaggggtaga gcgcggcttc ggccccaaca atttcgatcg ccggattttt
     2161 tgcgcgaccg gcgatggcgt tgccagcgat cagtccaccg ccaccgatgg ggaataccag
     2221 cacgtcgagc tcgggcacct cttccagcat ttcaagggca atcgtgccct gcccggctat
     2281 gatgccataa tcgtcatagg gatgaacgag cacgaggccg cgctgcgcca taatctgctc
     2341 gcagcgcggc tgcgcttccg caaccgattc gccgtggagc accacttccg cgccgtgcga
     2401 ccgggtcgct gcgatcttaa cgaacggcgt cgtcactggc atcacgatcg ttgacgggat
     2461 gccgagccgc gacgcgtgat aggctaccgc ctgggcatga ttgcctgccg acatggtgat
     2521 gaccccgcgc ttgcgctcgg cttcgctcag ggaggcaagc ttcaccagcg cgccgcgatc
     2581 cttgaacgaa ttggtcacct ggagattttc gtatttgacg tagacctccg ccccggtcag
     2641 cgcggacagt ttcggcgccg gtagcatcgg cgtccgcaac accacgttct cgatcacgcg
     2701 gcgggctgct tcgatatcgg caatgcttac gcccaacgct ccctccagac gcgatgtcgc
     2761 accatgccgc aagcaccacg caggttccag cgtgtcgacg gcaccccttg aacagaaccg
     2821 attctttatc catctcgatt aagattggat ggtctataat ggggtactgg cggaaatcgg
     2881 cccatgtcca tggacatcaa accccacgct tatgatccgg tggcccagcc ggagttgttc
     2941 gaaggcgtgc tggcgcgccg ggtcattgct ttcatcatcg atttcatcgt catttcaata
     3001 cctgtggtgc tggcggcgat gttcattttc gccttcggta tcgtcaccct cggtcttggc
     3061 tttgccctgt actggctgct gccctcggcg acagtgattt gggcgattct ctatttcggc
     3121 ttcacccttg gcagtccggc ctctgccacc atcggcatgc gtgtcatgga tctggagatg
     3181 cggacctggt acggcgcgcc cgcctatttc gtcctcggtg cggtgcacgc aattgccttc
     3241 tggttcacga tctctttctt cacgccattg atcctgctgg tgcccttctt caacgaacgg
     3301 aggcggctgc tgcacgacat tcttctcggc actgtgatcg tcaataacag tgcgcgagcc
     3361 tcgtacttgc gcggggccat gcagcccgtc aggaccggat aatgggcttt gacggagagc
     3421 atttggcgcg cgatgctacg gtcctgagac aaagatgacg gcctgatccg tgacccagca
     3481 ctcgcgcgac acaccacagt tctacctcac ggcgccgtcg ccatgccctt atctggaggg
     3541 acacgaagag cgcaaggttt tcacccatct ggtcggcgac cgcgcagggg agctcaacga
     3601 cctgctgacc catggcggct ttcggcgtag ccagtcgatc gcctaccggc cagcctgcga
     3661 gggatgccgt gcctgcgtct ccgtgcgcgt cgttgctccc gacttcgagc cttcccgcaa
     3721 tatgcgccgt atcgccgagc gcaacgccga cattgtagga gagatgcgct cgcccgctcc
     3781 gacgtccgag cagtattcgg tattccgcgc ctatctcgat gcgcggcatc gcgacggcgg
     3841 aatggccgac atgacagtgc tcgactacgc gatgatgatc gaagacagcc acgtcgatac
     3901 gcgcctcgtc gagtatcgac ggcgcggacc cgacacgggc atcaacggcc gcggcgccgg
     3961 gcagatgctg gctgtcgccc tcaccgacgt gctcagcgat ggcctgtcga tggtctattc
     4021 attcttcgac cccgatcaag ccgatcgctc gctcggcact ttcatgatcc tggaccatat
     4081 cgagcgagcc aggcgaatgg ggttgcctta cgtctatctg ggctattggg tgccaggctc
     4141 gcgcaaaatg gactacaaag gccgttttct gccgcaggag cggttgatgc catcgggctg
     4201 gagccgcgtg gaacgctagc tggcctagct tcccagcgcg aagtcgacga gcagctttat
     4261 attcaaacaa atgatgactg cagcggtgat tactgccagc agcgtcaccc agcgcggggc
     4321 aaccaactgc cccatctttt tcctgtcggc ggtaaacatc accagcggca caatcgcgaa
     4381 cggcaactgt aggctcaata cgacctgcga caggatcagc agctgcgcgg tgccctgtga
     4441 cccgaaccag atggttacga tcgcggccgg cacgatcgcg attgcgcgcg tcagcagccg
     4501 ccgcgcccaa ccaggcagac ggatatcgat aaatccttcc atcacgatct gaccggagag
     4561 ggtggctgtc acggtggagt tcaacccgca gcacaacagt gcgattccga acaaggtcgg
     4621 ggcgatcgcg gagccgagca gtggcgcaat gaatgcatgc gcctgttcga gttcggcgac
     4681 gtcgtgcctg ccggtcttgt gaaacgtggc tgccgcaaga atgaggatcg aggcattgat
     4741 cagaagcgcg aacatcagcg cgatcgttga atcaattgtc gccaacttga ttgcctcgcg
     4801 ccggtcctcg acgctggttc caaagcggcg agtctgcacg acgccggaat gcagataaag
     4861 attgtgcggc at
//
LOCUS       DATDHO010000099         2319 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_350491, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000099 DATDHO010000000
VERSION     DATDHO010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2319
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_350491"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..969
                     /locus_tag="VIY07_01800"
     CDS             <1..969
                     /locus_tag="VIY07_01800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HEY6380517.1"
                     /translation="GVNASPMPDDIPDDTGLPQRSHGTPVYQAPHRVYEAPRYQTPQR
                     AYEPPTTQRHGDAPVYQAPQRTYEPLTTQRPYDAPVYQPPQRALPALGPVRRQIAGPI
                     TPATLTPPATLACPIVSALDRWVNDSVQPAAMRWFGTPVTEIKQISAYSCRGMVGSGG
                     HGISEHSFGNALDIAAFTLADGRRVTVQEGWHGAPEEQGFLRDIHLAACDYFNTVLAP
                     GYNAAHYNHFHVDLMRRPNGDRPCRPEAISGEVAAAKARAMYAKPQRGPAYTGLARSD
                     KKTSRTPAAMPGEDGYLDDVLINLQTRRGPARDVRGNNVTSSLAPR"
     gene            complement(966..1886)
                     /gene="ubiA"
                     /locus_tag="VIY07_01805"
     CDS             complement(966..1886)
                     /gene="ubiA"
                     /locus_tag="VIY07_01805"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEY6380518.1"
                     /translation="MSDGAGRVSDATGNWVDVLAPPVSRPYLRLGRLDRPIGSWLLLL
                     PCWWSVGLAGMHEGGFPNLWHIVLFFIGAFAMRGAGCTWNDLVDRNLDGLVERTRSRP
                     IPSKQVTIAQAKVFMIAQALVGLLVLVQFNRFTVITGIASLLVVAIYPFMKRITYWPQ
                     IFLGLAFSWGALMGWPAEFGRLDWPALVLYAGSICWVIGYDTIYAHQDREDDLLIGIK
                     STALLFGERTPSLLAGFYVAAVVLIAVAGFMAGGGIVFALGIIAFAAHLAWQVTRLDI
                     DDPAHCLKLFKSNRDAGLILFAAMLIDAAI"
     gene            complement(1883..>2319)
                     /locus_tag="VIY07_01810"
     CDS             complement(1883..>2319)
                     /locus_tag="VIY07_01810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380519.1"
                     /translation="PPPPQQQQPSQQQIPPCVQEFFRLREDAEKKAAAIKAANERKAP
                     PKEACQLFGALVTAQSKMLKFANENGTWCGIPPQIAEQLKLAEAKVSEIRTKVCQAAA
                     APPRPQGPSLSDALTSPIPDSNNIKTGRGTFDTLTGKPLGNR"
BASE COUNT          452 a          731 c          719 g          417 t
ORIGIN      
        1 ggcgttaacg cctcgccgat gcctgatgac attccagatg acaccggcct gcctcaacgg
       61 tcccacggca ctccggttta tcaggcgccg caccgcgttt atgaggcgcc gcgctatcag
      121 acgccgcagc gtgcttatga gccgccgaca acgcagcgtc atggtgatgc tccagtctat
      181 caggcgccgc agcgcactta tgagccgctg acaacgcagc gtccttacga cgctccggtc
      241 tatcaaccgc cgcagcgcgc cttgccagcg ctcggacctg tgcggcggca gatcgccggt
      301 ccaatcaccc cggcgacgct gacgccgccg gcgacgcttg cctgtccgat cgtctccgcg
      361 ctcgatcgtt gggtgaatga tagcgtgcag ccggccgcga tgcgctggtt cggcacgccg
      421 gtgaccgaga tcaagcagat atcggcttac tcttgccgtg gcatggtcgg ttccggaggt
      481 cacggaattt cggaacattc cttcggcaat gcgctggata tcgcggcgtt cacgttggcg
      541 gacggccgcc gggtcaccgt gcaggaaggc tggcacggtg ctccggaaga gcagggattt
      601 ttgcgcgaca ttcacctcgc cgcatgcgac tatttcaaca cggtcctggc gcccggttat
      661 aacgccgcgc attacaatca ctttcacgtc gacttgatgc gccgccctaa cggggatcgt
      721 ccttgccggc ccgaagcaat atccggcgag gttgcagcgg caaaagcgcg tgcgatgtat
      781 gcgaaacctc agcgtggtcc tgcgtacacc ggcctggcgc ggtcggacaa aaagacaagc
      841 cgcacgccgg cggcaatgcc gggcgaagat gggtatctcg acgacgtcct gatcaacttg
      901 cagactcggc gcggtccggc ccgcgatgtg cgcggcaata acgttaccag ctcgctcgcg
      961 ccccgctaaa tcgctgcatc gatcaacatc gcggcgaaca agatcaggcc tgcatcgcga
     1021 ttggatttga atagcttcag gcagtgtgcc ggatcgtcaa tgtcgagccg cgtcacttgc
     1081 catgccagat gtgcggcgaa ggcgatgata cccagcgcaa agacaattcc gcccccggcc
     1141 atgaacccgg cgaccgcgat caggaccacc gcggcgacgt aaaatccggc aagcagcgat
     1201 ggcgtgcgct cgccgaacaa cagggccgtc gatttgattc cgatcagcag atcgtcctcg
     1261 cgatcctggt gggcgtaaat agtgtcatat ccgatcaccc agcagatcga tcccgcgtag
     1321 agcacgagcg ccggccaatc gagacggccg aactcggccg gccagcccat cagcgcgccc
     1381 caggagaagg cgaggccaag aaaaatctgc ggccaatacg tgatgcgctt catgaacgga
     1441 tagatggcaa ccacgagcag tgaggcgatg ccggtgatca ccgtaaagcg attgaactgg
     1501 accagcacca acagaccgac cagcgcttgc gcaatcatga agactttcgc ctgcgcgatc
     1561 gtaacctgct tcgaggggat cggccgggag cgagtgcgct cgaccagtcc atcaagattg
     1621 cggtcgacca gatcgttcca ggtgcagcct gcgccgcgca ttgcaaatgc gccgatgaag
     1681 aacaggacaa tatgccaaag gttcggaaat ccgccctcgt gcatgccggc aagaccaacc
     1741 gaccaccagc atggcagcag caacagccag gaaccgatcg gccggtcgag acgaccgagt
     1801 ctcaggtaag gacggctgac aggcggcgcg agtacgtcga cccagtttcc ggtggcatcg
     1861 gagacgcgtc cggcgccgtc gctcatcggt tgccgagcgg cttaccggtc agggtgtcga
     1921 aggtaccgcg ccctgtcttg atgttattgg agtccggaat gggactggtg agtgcatcgc
     1981 tcaggctggg tccctgcggt cggggaggcg ctgccgccgc ctgacatact ttggtgcgga
     2041 tctcggacac cttcgcctcg gccaacttga gctgctcggc gatctgcgga ggaatgccgc
     2101 accaggtgcc gttttcgttg gcaaatttga gcatcttgga ttgcgcggtc acgagcgcgc
     2161 cgaacaactg gcatgcctcc ttcggcggcg ctttgcgctc gttcgccgcc ttgattgctg
     2221 cggctttctt ttcagcatcc tcgcgcagcc tgaaaaactc ctggacgcag ggcggtatct
     2281 gctgctgcga cggctgctgc tgctgcggcg gcggcggct
//
LOCUS       DATDHO010000100         2259 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_301283, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000100 DATDHO010000000
VERSION     DATDHO010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_301283"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            13..1374
                     /locus_tag="VIY07_01815"
     CDS             13..1374
                     /locus_tag="VIY07_01815"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY6380520.1"
                     /translation="MVALPVPQASPTTEPEPANQREHARILASYGGEYENARLQAMIA
                     KTVDRLVAASERPDLKYQVTILNSPAINAFALPNGRLYITRGLIALANDKAELASVLS
                     HEMGHVIARHAAIREEQARQVAIISHVVNDVLSDPQVGALALAKSKLTLAAFSRAQEF
                     EADGIGVGISARAGFDPYGASRFLTGMQRNAELKAAGGADPRALDFLSSHPATPERVK
                     NALTNARQFTGPGAGERDRNEYFSIIDGMVYGEDPSEGFARGRHFLHPKLGFTFVAPL
                     GFTLDNTAQAVLGLKEGGGEALRLDVISVPAEQTLSDYLKSGWMENIDASSVEEFSLN
                     GFPAASATAGGGNWSFRLFAVRFGSEVYRFIFAAKARTPQVDRAFRESIMTFRRMTLK
                     ESEQVKPLRLRVVTVGETDTVEKLAHRMAASDHSIERFRVFNGLGPHDRLKPGEKVKI
                     AVE"
     gene            1541..2071
                     /locus_tag="VIY07_01820"
     CDS             1541..2071
                     /locus_tag="VIY07_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEY6380521.1"
                     /translation="MPDYRRAKIAGGTFFFTLTLADRSSDLLVREIERLRRVYIHVRE
                     HKLFKTVAICILPDHLHAIWSLPAGDSDFARRWSLIKAGFSRGLPAASSSSSLTRKRE
                     KGIWQRRYWEHAIRNNHDLEQHVAYIHFNPVKHGLVPRVSDWPHSSFHQYVKRGDLPL
                     DWGGDVRDIPDSVFGE"
     gene            2073..>2259
                     /locus_tag="VIY07_01825"
     CDS             2073..>2259
                     /locus_tag="VIY07_01825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380522.1"
                     /translation="MLLPLGRPRRETHYRPFTLRTITWWARRVPPAATTPLPTLHFRP
                     TAQLSPPSQLMVNSRGTS"
BASE COUNT          440 a          700 c          679 g          440 t
ORIGIN      
        1 acagaccatc gcctggtcgc gctgccggta ccgcaggcct ccccgacgac cgaacccgag
       61 ccggcgaacc aacgcgagca tgcgcgcatt ctcgcttcct acggcggcga atatgaaaac
      121 gcccgcttgc aggcgatgat cgccaaaacc gtcgatcgcc tcgtcgcggc gtccgagcgt
      181 ccggacctga aataccaggt gaccattctc aactccccgg ccattaatgc tttcgcgctg
      241 ccgaatggcc ggctctacat cacgcgcgga ctgattgctc tggcaaacga caaagcagaa
      301 ctcgcttcgg tgctgtcgca tgaaatgggc cacgtgatcg cgcgccacgc cgcaattcgc
      361 gaggaacagg cgcggcaggt cgcgatcatc agtcacgtcg tgaatgacgt gctcagcgac
      421 ccgcaggtcg gagcgctcgc actcgccaag tccaagctca cgctggcggc cttttcgcgc
      481 gcgcaggaat tcgaggccga cggcattggc gtcggcattt cggcgcgcgc gggattcgat
      541 ccgtacggcg cgtcacgctt cctgaccggc atgcagcgaa atgccgaact caaggccgcc
      601 ggcggagccg atccccgcgc gctggatttt ctatccagcc atccggcgac gccggagcgt
      661 gtcaaaaatg ccctcacgaa cgcgcgccag ttcaccggcc ccggcgccgg cgagcgagac
      721 cgcaacgaat atttcagcat catcgatgga atggtctatg gcgaggatcc cagcgaaggt
      781 ttcgcgcgcg gccggcactt tctccatcca aagcttggat tcacgttcgt ggcgcccctg
      841 ggcttcacgc tcgacaatac cgcgcaagcg gtgctcggcc tgaaggaagg cggcggcgaa
      901 gcgctccgcc tcgacgtgat aagcgttccg gccgagcaga ccttgtccga ctatctgaag
      961 tcggggtgga tggagaacat cgatgcgtca agcgtcgagg aattttctct caatggcttc
     1021 ccggcggcga gcgcaacggc aggtggcgga aactggtcgt tccgtctgtt cgctgtgcgt
     1081 tttggcagcg aagtctaccg tttcatcttt gccgcaaagg caaggacgcc gcaggtcgat
     1141 cgcgcctttc gcgagtcgat catgacgttc cgccgcatga cgttgaagga aagcgaacag
     1201 gttaagccgc ttcgcctcag ggtggttacg gtcggtgaga ccgacacggt ggaaaaactc
     1261 gcgcaccgca tggcggcgtc cgaccattcg atcgagcgct tccgcgtgtt caacggactc
     1321 ggcccgcacg accggctcaa gccaggcgaa aaggtgaaga ttgccgtgga gtgatgttgg
     1381 tcgtacgacg gcgcaattcc gtggttggct gtagggtggg ctaaggcgcg ctaacgccga
     1441 gcccaccacc agcctaacgg ctgacgacaa tcgcgaggtg gctctcgtag gctgcgccaa
     1501 gacggctacg tcgggcgctt caccacccgt tcaaatgcac atgccggatt atcgtcgggc
     1561 aaaaattgca ggcggaacgt tctttttcac gctcaccctg gcggaccggt ccagcgacct
     1621 gttggtgcgc gagatcgaac gtcttcgtcg tgtctatatt catgtacgag agcacaagct
     1681 gttcaaaaca gtggctatct gcattctgcc ggaccatctc cacgcaatat ggtctttacc
     1741 agcaggtgat agcgactttg cgcggcgatg gagcttgatc aaggccggct tttcgcgcgg
     1801 cctgcctgcg gcctcatcct cttcgagcct aactcgcaaa cgcgaaaaag gcatctggca
     1861 acggcgatat tgggaacatg ccattcgcaa taatcatgac ctggaacagc atgtcgcata
     1921 tatccatttc aatccggtca agcatgggct cgtgccgcgc gtttcggatt ggccgcacag
     1981 tagttttcat cagtatgtga aacgcggcga cctgccgctg gattggggcg gtgacgtgcg
     2041 cgacattccg gattcggtgt ttggagagta gcttgcttct tcccttgggg cggccaagac
     2101 gtgaaaccca ctatcggccg ttcacattgc ggacaatcac gtggtgggca cggcgcgtgc
     2161 cgcctgcggc gaccacgcct ttgcccaccc tacattttcg cccaaccgct cagctctcgc
     2221 cgccttcgca gttgatggtg aattcgcgcg gcacgtcgg
//
LOCUS       DATDHO010000101         3993 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_251746, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000101 DATDHO010000000
VERSION     DATDHO010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3993)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3993)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3993
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_251746"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..988)
                     /gene="ftsZ"
                     /locus_tag="VIY07_01830"
     CDS             complement(<1..988)
                     /gene="ftsZ"
                     /locus_tag="VIY07_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEY6380523.1"
                     /translation="MTINLTIPDIREMKPRITVFGVGGAGGNAVNNMITAGLQGVDFV
                     VANTDAQALTMSKAERIIQMGAQVTEGLGAGSQPEVGRAAAEEVIDEIRDHLTGAHMV
                     FVTAGMGGGTGTGASPIVAKVARELGILTVGVITKPFHFEGQRRMRFAEAGIVELQKV
                     VDTLLIIPNQNLFRVANEKTTFADAFAMADQVLYSGVACITDLMVKEGLINLDFADVR
                     AVMREMGKAMMGTGEASGEKRALTAAEAAISNPLIDDASMKGARGLLISITGGKDLTL
                     YEVDEAATRIREEVDQDANIIVGATFDESLEGIIRVSVVATGIDSPGAAARQA"
     gene            complement(1110..2432)
                     /gene="ftsA"
                     /locus_tag="VIY07_01835"
     CDS             complement(1110..2432)
                     /gene="ftsA"
                     /locus_tag="VIY07_01835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEY6380524.1"
                     /translation="MTVLRFGLTPKMKPVSPKRAAVVACLDIGTSKVVCLIARLEPQA
                     PQDVLRRRSHGVRLLAFAHTAASGMKAGSVIDLVEAEQMVRQAIDIAESTAGVELESV
                     VVSMSGGHLGSERFLANIDLAGRAVTEADNGRVLAAASRHSVRDGRAVLHSLPIGYTV
                     DAAAGIREPRGMLGHRLGVDMHMVTADVATVRNLMLTVERTHLSVEAMVASPYVAGLA
                     ALADDEADLGVAAVDMGAGTTSLAVFSAGQFVHADGFALGGQHVTMDVARGLNTGIAD
                     AERIKAIYGSVLAGGSDERDMITVPPVEDDEREPPQFVSRASLVRIIKPRVEEILEMV
                     RDRLAASPFAAEPRGRIVLTGGASQLNGLADLAARILRRPVRIGRPLGVAGLPEAAKG
                     PAFAVAAGLLVYPQAAHLEHFEPRRTRQLMTGTGGYMARVGRWLRESF"
     gene            complement(2429..3262)
                     /locus_tag="VIY07_01840"
     CDS             complement(2429..3262)
                     /locus_tag="VIY07_01840"
                     /inference="COORDINATES: protein motif:HMM:NF015739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEY6380525.1"
                     /translation="MLVGLNVPRGLGSSAAALLLLGSVCYGVVRGGHGPQIVENVNNI
                     CDTAANRLGFRISEIALAGERELRRDEILVLAGITDHSSLLFLDAARTRARLMMNPWV
                     ADATVLKLYPDRLRIEIKEREAFALWQKDGRVSLIAADGTVLETAVPPRFLALPLVVG
                     KGAERGAQDFLALIARHPVIARLTGASVLVAERRWNLRLKDGMEIMLPENDAEHALRI
                     LVELDRNRKILSRDILAVDLRLPDRVTVRQSDAAAAARDQAIKDAEKIKKSKAGKGGE
                     A"
     gene            complement(3745..>3993)
                     /locus_tag="VIY07_01845"
     CDS             complement(3745..>3993)
                     /locus_tag="VIY07_01845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017484189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HEY6380526.1"
                     /translation="SWLNEEALREEVTAAAIKAVIARQLSDEMKKRKISKKRMAELMK
                     TSRAQVDRLLDPGNGSATIESLQRAARIVGRELRMQLV"
BASE COUNT          766 a         1287 c         1169 g          771 t
ORIGIN      
        1 cggcctgacg ggcggccgct cctggactat cgattccggt tgcgacaacc gagactcgaa
       61 taatgccttc gaggctttca tcgaatgtcg cgccaacgat gatgttggca tcctgatcga
      121 cttcctcgcg aatgcgagtg gccgcttcgt cgacctcgta cagcgtgaga tccttgccgc
      181 ctgtaatcga gatcaacaaa cccctggcgc ccttcatcga ggcgtcgtcg atcagcggat
      241 tggatatcgc cgcttcggcg gcggtcagcg cgcgtttctc gcccgacgct tcgccggtac
      301 ccatcatcgc cttgcccatc tcgcgcatga cggcgcgtac atcggcaaaa tcaagattga
      361 tcaggccttc cttgaccatc aggtcggtga tgcaggcaac gcctgaatac aagacctggt
      421 cggccatggc gaaggcatcg gcaaaggtgg ttttttcgtt ggcgacccgg aagaggttct
      481 gattcgggat gatcaacagg gtgtcgacca ccttctgcaa ttcgacgatg ccggcttcgg
      541 caaagcgcat gcgccgttga ccttcgaaat gaaacggctt ggtaatcacg ccgaccgtca
      601 gaataccgag ttctcgcgcg accttggcaa cgatcggaga ggcgcctgta ccggtgccgc
      661 cccccatgcc ggccgtgacg aacaccatgt gcgctccggt gaggtgatcg cgaatttcat
      721 cgatcacctc ttccgccgcg gcgcgcccta cttccggctg tgaacccgcg ccgaggccct
      781 cggtgacctg cgcgcccatc tgaatgatgc gctcggcctt cgacatcgtg agcgcttgcg
      841 cgtcggtgtt ggcgacgaca aagtcgacgc cctgcagtcc cgccgtgatc atgttgttga
      901 ccgcgttacc gccggcgccg ccgacgccga acacggtaat tcgaggtttc atttcccgga
      961 tgtccggaat cgtcaggttg atcgtcatgt ttgcctcttg aatgcacggg cagcaggcct
     1021 tgcgtcgcgc cgaaggcgcc gatcacgcat ttgcacgccg ccgaattggg ccgttccgcc
     1081 acgggccgat tcgtggtttc gttgaagggt cagaagcttt cgcgcagcca tcgtccgacc
     1141 cgtgccatgt aaccgcccgt tcctgtcatc aattgccgcg tacgccgcgg ttcgaagtgt
     1201 tcgagatgcg ctgcctgtgg gtagacaagc aggcctgccg ccaccgcaaa ggcgggtccc
     1261 ttagccgctt caggcaaacc ggccacgccc aggggacgac ctattcttac gggacgccgc
     1321 aagatgcgag cggcgagatc agcgagtccg ttcagctgac ttgcaccgcc cgtcaggacg
     1381 atgcgaccgc gcggctctgc cgcgaaggga gacgcggcca gccgatcgcg caccatctcg
     1441 aggatttcct cgacccgggg tttgatgatg cgcacaagcg atgctcgcga gacaaattgc
     1501 gggggctcgc gctcgtcatc ctccaccggt ggtaccgtga tcatgtcccg ttcatccgat
     1561 ccccccgcta aaacactgcc ataaatcgct ttgattcgct cagcgtcggc aatgccggtg
     1621 ttgagcccgc gcgcaacatc catggtcacg tgctgacccc cgagggcaaa cccgtcggcg
     1681 tgaacgaact gaccggccga aaacaccgcc aaacttgtgg tcccggcgcc catatccacg
     1741 gccgccaccc caaggtcagc ctcgtcatcg gcaagcgcgg cgaggccggc gacgtatggg
     1801 gatgccacca ttgcctccac agaaagatgg gttcgctcaa ccgtaagcat cagattcctc
     1861 acggttgcca cgtcggcggt gaccatatgc atgtccaccc cgagacgatg gccgagcatg
     1921 ccgcgcggct cccgaattcc ggcggcggcg tcgaccgtgt aaccgattgg caatgagtgc
     1981 agcacggcgc gcccgtcccg cacggaatgt cgacttgcag cagcgagtac acggccgtta
     2041 tcggcttcgg taactgctcg ccccgccaga tcaatgttgg caaggaatcg ctcgctgccg
     2101 aggtggccgc cggacatcga tacaacgaca gattccagtt ccaccccggc cgtgctttcg
     2161 gcaatgtcga ttgcctggcg gaccatttgc tcggcctcga ccagatcgat caccgatccg
     2221 gccttcattc cactcgccgc ggtgtgagca aaggccaaca ggcgcacgcc gtggctgcgc
     2281 cggcggagaa cgtcttgcgg cgcctgaggc tcgagccgcg cgatcagaca gacgaccttg
     2341 ctggtcccga tatcaagaca cgcgaccaca gccgcgcgct tcggcgaaac cggtttcatt
     2401 ttcggggtga ggccgaagcg cagcacggtc atgcttcgcc tcccttgccg gctttgctct
     2461 tctttatttt ctccgcatcc ttgatcgcct gatcgcgtgc agctgccgcc gcatcagatt
     2521 ggcgcacagt gacgcgatcg ggcagcctca ggtcgacggc aagaatgtct cgggacagaa
     2581 ttttcctatt gcggtcgagc tccacaagga tgcgcagggc gtgctcggca tcgttttcag
     2641 gcagcatgat ctccatgcca tccttgaggc gcaggttcca acgcctctcg gcgaccagca
     2701 ccgaggctcc ggtcaaacgc gcgatgacgg gatggcgcgc gatgagcgcg agaaaatcct
     2761 gggcgccccg ttcggcgcct ttgccgacga caagcggcag ggccaagaaa cgtggcggca
     2821 ccgccgtttc aagcacagta ccatcggcgg caatcaagct cacgcggccg tctttttgcc
     2881 acagcgcaaa cgcttcgcgc tccttgatct cgatccgcag gcgatccgga taaagcttca
     2941 gcacagtggc atcggcaacc cacggattca tcatgaggcg cgcgcgcgtg cgcgcggcgt
     3001 cgagaaatag cagcgaggaa tggtcggtga ttccggcaag gaccagaatt tcgtcgcgcc
     3061 ggagctcgcg ctcaccggca agcgcgattt ctgaaatgcg gaatccgagc ctgttggcgg
     3121 ctgtgtcgca gatattgttg acattctcga cgatctgggg tccgtgtccg cctctgacga
     3181 cgccatagca gacacttcca agcagcagca gcgcggcggc cgacgaacca agtccgcgcg
     3241 ggacgttcag gccgaccagc atatgacccc atcgtcgcgc aatgcgcatc gcgcgccagt
     3301 cattcaaccg cggccacaaa acaaacgatg agcgtcgttt cagcgattga gcgaggcgca
     3361 ctcgaccttc catcgcaacc tgcttacgtg ttgggcccgc ccaagggccg caaaaccctg
     3421 cccgaatcat gatgatgatc atgcttcggt atcggcttca gctgaggtat cccgtcccgg
     3481 aagccgccgg aaagcggtga aatccgcgcg cacgacttta tcggcagcca aacgcgcggc
     3541 gcgccgccat cgcctagtct tcaggcttat tggtaaatga ttagtaaaat ttgagggaat
     3601 gtatgaggtt cggcgcaaaa taggtcgggc gccacaaagg agtgacgatt ggcccccgca
     3661 tcaattacgg catcaatcgc cctcgccaat attgcggcgt ttaaacgccg caatatcagg
     3721 gagcgcaaac aggctgattt cggatcatac caactgcatc ctcaactcgc gcccgacgat
     3781 gcgcgccgcg cgctgaaggc tctcgatggt cgcactgccg ttaccggggt cgagcaggcg
     3841 gtcgacctgg gcacgactgg tcttcatcag ctcagccatg cgcttcttgc tgatcttcct
     3901 tttcttcatc tcgtcggaga gctgacgcgc aatcacagct ttgatcgcag cggcggtgac
     3961 ttcctcgcga agcgcttcct cgtttagcca gct
//
LOCUS       DATDHO010000102         6772 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_53130, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000102 DATDHO010000000
VERSION     DATDHO010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6772
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53130"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..626
                     /locus_tag="VIY07_01850"
     CDS             <1..626
                     /locus_tag="VIY07_01850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HEY6380527.1"
                     /translation="GIGLAFFIMIGAIIDIAERIGLFRVPVLAAWQRAIGLPRSVWGT
                     ALAHFGIAVTLLGIVGVSTWASELIVAMKPKQTVSLSGYELAFEGLVQRSGPNYREAA
                     ARFTVREGGVPIATMEPSKRSFTARATTTTEAALLTRGFSQLYLSLGDVNSDGSISVR
                     LYHKPLVLLIWLGAVVMAFGAALSLSDRRLRIGIPKPATKSMMQPAE"
     gene            630..1106
                     /locus_tag="VIY07_01855"
     CDS             630..1106
                     /locus_tag="VIY07_01855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HEY6380528.1"
                     /translation="MWRHAFIVLFVALLASGPSQAVQPNEILKDSVLESRARNLSREL
                     RCMVCQNQSIDDSEAPLARDLRLLVRERLTQGDTDRQVLDFLVSRYGNFVLLRPPLEW
                     HTILLWGLPPAALIAGLIGLMIKVRRQRPTASGTEALSQNEERRLSTLVDDRLPKP"
     gene            1253..2803
                     /locus_tag="VIY07_01860"
     CDS             1253..2803
                     /locus_tag="VIY07_01860"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEY6380529.1"
                     /translation="MKPSVISAPDNPKKPRVPNGRRFVLLATTIASLGTAAFIASPDL
                     SFKGTYPAAIAQNLSEQAGKVQAPVGFADIVEKVKPAVISVRVKVDGGGQTSGLGSGD
                     VPPGLRDFFRRFGMPDVPDGSEGMPRGRGGRNFVTGQGSGFIISADGYAVTNNHVVDK
                     AESVQVTTDDGKTHKAKVIGSDPRTDLALIKVEDGPFPYVKLSDKTPRIGDWVLAVGN
                     PFGLGGTVTAGIVSARGRDIGASAYDDFIQIDAPVNKGNSGGPTFDTDGNVIGVNTAI
                     FSPSGGSVGIAFAIPADTVNSVIAQLKDRGSVTRGWIGVQIQPVTQAIADSLGLKKAE
                     GALVAEPQANSPAQKAGIEAGDIITSVDGKEVKDARDLAKKIGAMAPKASVKLTVLRK
                     GEEKTITLTLGELPNSKEARASIGDAENDADVGKLGLSLAPAARVAGSGAEGVVVTGV
                     DSNGIAAEQGFSTGDVILEIGGKSVSTPADVRDVVKNARTEGKRSVLVRVKKGDSLRF
                     VALPLARG"
     gene            3116..3796
                     /locus_tag="VIY07_01865"
     CDS             3116..3796
                     /locus_tag="VIY07_01865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY6380530.1"
                     /translation="MRLLVIEDDRDAADYLVKAFREVGHVADAATDGDDGLAMALGGQ
                     YDVLIVDRMLPKRDGLAVIGALRAKGMETPALILSALGQVDDRVKGLRAGGDDYLPKP
                     YSFSELLARVEVLARRRGGRGEETVLRVGDLKLDRLSHQVHRGEGEISLQPREFRLLE
                     YLMQHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGFSQPLLHTIRGAG
                     YMIRDGAR"
     gene            3780..5243
                     /locus_tag="VIY07_01870"
     CDS             3780..5243
                     /locus_tag="VIY07_01870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6380531.1"
                     /translation="MTALGKLFRTTTFKLTLVYLTVFALFAAFLLGYFALNTRLLITE
                     QITDTVNAEITGLSEQYRLGGIRRLVAVVDARARRPGSSLYLVTTFAGETLAGNVTTL
                     PPGTLDNPGWTETAYRRLDESDAADHLEHRALARVFQLPGGFRLLVGRDLDERDRLYK
                     IVLSAGRWSIAIVIVLGLVGGLFVTRRVLRRVDAMTETTRTIMQGDLTGRLPVAGTGD
                     ELDRLGGNLNLMLERIEALMRGLKEVSDNIAHDLKTPITRLRNRAEQALRSAKSEADY
                     RSALESTIEESDGLIRTFNALLMIARAESGQARENMSEFDAAEIAHDVGELYEALAEE
                     KGISLKVEADAPVPLKGNRELISQALANLIDNSIKYTEPCRDAENGLPAEIVVRAMSE
                     GERILLTVADSGPGIPEADRARVVERFVRLEQSRSKPGSGLGLSLASAVARLHGGELT
                     LADNQPGLKTVIALPRGGPVQMRDETPRKTKDLPKDG"
     gene            5200..>6772
                     /locus_tag="VIY07_01875"
     CDS             5200..>6772
                     /locus_tag="VIY07_01875"
                     /inference="COORDINATES: protein motif:HMM:NF015655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamine synthetase]
                     adenylyltransferase/[glutamine
                     synthetase]-adenylyl-L-tyrosine phosphorylase"
                     /protein_id="HEY6380532.1"
                     /translation="MKRPAKRKTSQKTADVGGLNSTTSEKLADRITTAPLRVDEKAAQ
                     VRIDAWLSELTAEEAKELRSLFAVKPTVNALIESFAESSPYLWELASRYPKRLLRLLN
                     SDPDQHLIALLNQHSRKIASTRDEAEAMRFLRQMKGEAALLIALTDIGGVWPVMRTAR
                     ALTNLADTAVESALRFCLTDAVRVGRLVPKDKSQPHVGSGYVVLAMGKMGAFELNYSS
                     DIDLIVLYDPSAPALPADAEPSTLFVRITQRLVRLLQERTVDGYVFRTDLRLRPDPAS
                     TAIAISTEAALFYYESVGQNWERAAMIKARACAGDIAVGEALLHQIAPFVWRKYLDFA
                     AVADIHAMKRQINAYRGHGEIAVEGHNIKLGRGGIREIEFFVQTQQLIAGGRNPALRD
                     RDTLTTLDKLCEDQWIDEAARDAMKAAYCFLRTVEHRLQMVNDEQTQTLPADRAAMNH
                     FARFMGFADRDAFARALLGHLDKVQHYYARLFEKEEDIGRPALAFPVEADDHKTLDRL
                     SELGFRAPLEASGIIR"
BASE COUNT         1390 a         1962 c         2045 g         1375 t
ORIGIN      
        1 taggcatcgg cctggccttt ttcataatga tcggggcgat aatcgacatt gctgaacgca
       61 tcgggctgtt tcgcgtgcca gtgttggcag catggcagcg cgcgatcggt ttgccacgct
      121 ctgtttgggg cacggcgctg gcgcatttcg ggattgcggt cacattgctc gggatagtgg
      181 gtgtgagcac ctgggcaagc gaactcatcg tggcgatgaa gccaaagcaa accgtgtcgc
      241 tttccggata tgaactggcg ttcgaaggcc ttgttcaacg ctctggacca aactatcgcg
      301 aagccgctgc gcgatttacg gtgcgcgagg ggggtgttcc gatcgccacg atggagccgt
      361 ccaaacgcag tttcacggcc cgcgcgacca caacaacaga ggcggcctta ctgacgcgag
      421 ggttcagcca actgtatctg tcacttggcg acgtcaatag cgacggctca atctcggtca
      481 ggctttatca taagccgttg gtgcttttga tctggctggg cgccgtagtc atggcttttg
      541 gcgcggcgct gtcgttatcg gatcgcagac ttcgaattgg catccctaag ccggcaacaa
      601 aatcaatgat gcagccagca gagtagggca tgtggcgcca cgcatttata gttctgttcg
      661 tcgcgctcct cgcctcagga ccgtcgcaag ccgtccagcc caacgagatc ctgaaggatt
      721 ctgtcctcga gagtcgggcg cgtaatttgt cgcgcgagtt gcgttgcatg gtctgccaga
      781 accagtcgat cgatgattcg gaggcgccac tggctcgcga cctgcggctc cttgtgcgcg
      841 agcggctgac ccaaggcgat accgaccggc aggtgctcga tttcttggta tcccgctatg
      901 ggaacttcgt gctgctcagg ccgccgctcg aatggcacac gattctcttg tggggattgc
      961 cgcctgcggc gctaattgcg gggcttatcg gcctgatgat caaagtgcgt cgacaaaggc
     1021 caacagcttc tggaaccgaa gcgctcagcc agaacgagga gcgcaggctt tcgactttgg
     1081 tcgatgacag acttccgaag ccttgaatgg tcttcagaat ttcaaaacgt tcccgattcc
     1141 gaatcttaca aaagtttaat cctgccgaca ggaccccgta aggctcgtcg caccatctta
     1201 gggtgcgaac ccgcgcgctt gcgcgccaaa agaatctgat ggagatctgc tgatgaagcc
     1261 gagcgttatt tccgctcctg acaatccgaa gaagccgcgc gtgcctaatg gtcgccggtt
     1321 cgtccttctc gccaccacca ttgctagcct cggtaccgca gcgttcatcg cttcgccgga
     1381 ccttagtttc aaaggcacct atcccgccgc catcgcgcag aatctttccg agcaggccgg
     1441 caaggtgcag gcgccagtcg gattcgccga cattgtcgag aaagttaaac ctgcagtgat
     1501 ttcagtgcgc gtcaaggtcg atggcggcgg gcaaaccagt ggtctcggca gtggcgacgt
     1561 tcctccggga ttgcgcgact ttttccgccg ttttggaatg cctgatgttc ctgatggatc
     1621 cgagggtatg ccgcgaggcc gaggcggccg caactttgtt accggccagg gctccggctt
     1681 catcatttcg gccgatggct acgctgtgac aaacaatcat gtcgtcgaca aagcggagag
     1741 cgtccaggtt acaaccgacg acggcaagac gcacaaagcc aaggtgattg gcagtgatcc
     1801 ccgtacggat cttgcactga tcaaggtcga agacgggccg ttcccgtacg tgaagctatc
     1861 cgacaagaca ccccgcatcg gggactgggt tcttgccgtg gggaatccct tcggcctcgg
     1921 aggcaccgtc accgccggca tcgtttcggc acgtggtcgc gatatcggcg caagtgctta
     1981 tgatgacttc atccagatcg atgctccggt caacaagggt aactctggcg ggcccacgtt
     2041 cgacaccgat ggcaatgtga tcggcgtcaa cacggcgatc ttttcgccct cgggtggctc
     2101 ggttggtatc gcctttgcaa ttcccgccga caccgtgaac agcgttatcg cgcaactcaa
     2161 ggaccgcggt tcagtgacgc ggggctggat cggcgttcaa attcagccgg taacccaggc
     2221 aatcgctgac agccttggtc tcaagaaagc ggaaggtgcg cttgtcgccg agcctcaggc
     2281 aaacagcccc gcccagaagg ccgggatcga agccggtgac atcatcacct cggttgacgg
     2341 caaagaagtc aaggatgctc gcgatcttgc caagaagatc ggagcaatgg ctcccaaggc
     2401 ctcggtcaag ctgaccgtcc ttcgcaaggg tgaggagaag acgatcacgc tgacgctcgg
     2461 tgagttgcca aattcgaagg aagcgcgagc aagcattgga gatgccgaga acgatgctga
     2521 cgtcggcaaa ctggggctct cgctcgctcc ggccgcacgc gtcgccggct ccggggccga
     2581 gggggtcgtt gtgacgggcg tcgactcgaa tggcattgcc gcggagcaag ggttctcgac
     2641 tggcgacgtg atcctcgaga tcggcggcaa gtccgtgtcc acgcctgctg acgttcgcga
     2701 cgtggtcaag aacgcacgaa cggaaggtaa gcgcagcgtt cttgttcgag tgaaaaaagg
     2761 cgacagtttg cggttcgttg ccctgccgct tgcgcgcgga tgactttggg gacggccgcc
     2821 ggcatccgtc gcccccgccg gtaggtctgc cctcaacggg acgggcgttg agcccgtccc
     2881 ggcaattgcg gaaagcggca tcgaaagcgg ccgctttcgg tacgaactcc aaccccggca
     2941 tccgtcgccc ccgctggggt ggggtcgcgg agggggtggt gggtatccac caccccctct
     3001 cgtaaacgcg ccacggaatt gactggaatt ggtgtgaccg atgcccactt atccagattt
     3061 caacgggcag cgccctttcg gtaggatggc cgaagcgcaa ccggatcggg tcaccatgcg
     3121 cctcttggtc atcgaggacg accgcgacgc tgcggactat ctcgtcaagg ccttccgtga
     3181 ggtgggccac gttgctgacg ccgcaacgga tggtgacgat ggcctcgcca tggccctcgg
     3241 gggtcaatat gacgtgttga tcgtcgaccg catgctgccc aaacgggacg gcctggccgt
     3301 cattggcgcg ctgcgggcca agggcatgga gacgcccgcc ttgatcctct cggctcttgg
     3361 tcaggtcgat gaccgggtca aggggctgcg ggccggcggc gacgactacc tgcccaagcc
     3421 atattcgttc tccgagctgc tggcgcgcgt cgaggtgctg gcgcgccgac ggggcggccg
     3481 cggcgaggaa acagtgctga gagtgggcga tctcaagctc gaccgattgt cacaccaggt
     3541 ccaccgcggc gagggagaaa tttcgctgca gccacgcgaa tttcgcctcc tcgagtacct
     3601 gatgcagcat gccggccaag tcgtcacgcg tactatgcta ttggaaaatg tgtgggatta
     3661 tcatttcgac ccacaaacca acgtcattga cgtgcacatc tcgcgcttgc gttcgaaaat
     3721 agataaaggt ttctcccagc cgctcctgca tacgatccgc ggcgcgggat acatgatacg
     3781 tgacggcgct cggtaaactt tttcggacga ccacgtttaa gctgacgctg gtctatttga
     3841 ccgtattcgc gctgtttgcg gcgttcctgc ttggctattt cgccctcaac acccgccttc
     3901 ttatcaccga acagatcacg gacacggtca acgccgaaat caccgggctg tccgagcaat
     3961 atcgccttgg cggcatcagg cggctggttg ccgtagtcga cgcacgggca cgaagaccag
     4021 gatcgagcct ttatctcgtt acaacctttg ctggagaaac actcgccggc aacgtcacca
     4081 ctttgccgcc tggcacgctc gacaaccccg gctggacgga aacggcctat cgcagactcg
     4141 atgagtccga tgcggctgat cacctggagc accgagcgct ggcgcgcgtc tttcaactgc
     4201 cgggagggtt tcgcttgctg gtcgggcggg atctcgacga acgtgaccgg ctctacaaaa
     4261 tcgtgctgtc agccggacga tggtcgatcg cgattgtgat cgtgctcggc cttgtcggcg
     4321 ggctgttcgt tacccgtcgc gtactgcgcc gggtcgacgc catgacggag accacgcgca
     4381 caatcatgca gggtgacctg actggccgat tgccggtcgc cggcacgggc gatgagctcg
     4441 atcgtttggg aggaaatctc aacctgatgc tggagcgtat cgaagcactg atgcgcggtt
     4501 tgaaggaggt ttccgacaac atcgcccacg atctcaagac tccgatcacg cgcttacgca
     4561 atcgcgccga gcaggcattg cgttcggcaa aaagcgaggc cgactaccgc tccgcgctgg
     4621 agagcaccat tgaggaatct gacggcctta ttcggacctt caacgcatta ctgatgatcg
     4681 cccgcgcgga atccggtcag gcccgagaaa atatgagcga attcgatgcc gcggaaatcg
     4741 cgcacgatgt tggcgagctg tacgaggcct tggcggagga aaaaggcatt agtctgaaag
     4801 tagaagctga cgcgccggtg cccctcaaag gaaatcgaga acttatcagt caggcccttg
     4861 ctaacctgat cgacaactcc atcaaataca cagagccgtg tcgggacgcg gaaaatggct
     4921 tgccggccga aatcgtagtg cgcgcaatga gtgagggcga acggattctc ctgacggttg
     4981 cggatagcgg acccggcatt cccgaggcgg atcgcgctcg cgtggtcgaa cggttcgtca
     5041 gactggaaca aagccgatcc aaaccagggt cagggcttgg cttgagcctt gcctccgctg
     5101 tagcgcgcct gcatggcggc gaactgaccc tcgcagacaa ccagccaggt cttaaaaccg
     5161 tgattgcctt gccacgggga gggccggtac agatgcggga tgaaacgccc cgcaaaacga
     5221 aagacctccc aaaagacggc tgatgttggt ggtctcaata gtacaacaag cgaaaaactc
     5281 gctgaccgca taacgaccgc gcctctccgt gttgatgaaa aagcggcaca ggtgcgcatt
     5341 gatgcctggc tgtccgaatt gacagcggaa gaagctaaag agctccgaag ccttttcgcc
     5401 gttaagccca ccgtcaacgc actcatcgag agtttcgccg aaagctcgcc ttacttgtgg
     5461 gaattggcca gtcgttaccc aaaacggcta ctgcgattgc tcaattcaga tcctgatcag
     5521 catctgattg cgctgctgaa tcaacactca cgcaaaatcg cgtccaccag ggatgaagcc
     5581 gaagcgatgc gcttcttgcg tcaaatgaaa ggcgaggcgg cacttttgat cgcgctcact
     5641 gacatcggtg gcgtttggcc tgtgatgcgt acagctcgcg cgctaaccaa tctcgcggat
     5701 actgcggtcg aatcagcctt gcgtttttgt ctgacagacg ccgttcgtgt cgggcgcctt
     5761 gtaccaaaag ataaatctca gccgcacgtc ggaagcggtt atgtcgtgct ggctatggga
     5821 aaaatggggg cgtttgagct caactactca agcgacatcg acctcattgt cttgtacgac
     5881 ccctcggcgc ccgcgctgcc ggcagatgcg gagccttcaa ccttatttgt gcgcatcacg
     5941 cagcggctcg taagactgct gcaggagcgt accgtcgacg gctatgtgtt tcggacagat
     6001 ctgcgtctgc ggccggaccc ggcctccact gcaattgcga tttctactga agccgctctc
     6061 ttctattacg aaagcgtcgg tcaaaactgg gagcgggcgg ccatgataaa ggcccgtgcc
     6121 tgcgccggcg acattgccgt cggcgaagcg ctcctgcatc agatcgcgcc gtttgtgtgg
     6181 aggaaatatc tcgacttcgc agctgttgcg gatattcacg cgatgaagcg gcagatcaat
     6241 gcctatcgcg gacatggcga gatcgctgta gaaggccaca acatcaagct ggggcgcggc
     6301 gggattcgtg aaatcgagtt tttcgttcaa acccagcagc tcatcgcagg tggccgcaat
     6361 ccagctctac gggaccgcga taccctcaca actctggata agctttgcga agaccagtgg
     6421 attgatgagg ccgcgcgtga tgcgatgaaa gcagcctatt gctttctccg gacagtcgaa
     6481 caccggctgc agatggtcaa cgatgaacag acgcaaactt tgccagccga tcgggcggca
     6541 atgaaccact ttgcgcgctt tatgggtttc gccgaccggg atgcctttgc cagggcattg
     6601 ctgggacacc ttgacaaggt gcagcactac tacgcgcgcc tgtttgagaa agaggaggac
     6661 atcggtcggc cagctttggc atttccagtt gaagccgacg atcacaagac gctcgacagg
     6721 ctttcggaac ttggttttcg tgcgccgctg gaagcatccg gcatcatccg gc
//
LOCUS       DATDHO010000103         3715 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_400553, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000103 DATDHO010000000
VERSION     DATDHO010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3715
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400553"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            267..1991
                     /gene="ilvD"
                     /locus_tag="VIY07_01880"
     CDS             267..1991
                     /gene="ilvD"
                     /locus_tag="VIY07_01880"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY6380533.1"
                     /translation="MGAKSSLKSKLPSRHATEGPDRAPHRAFYYAMGLTSEQIHQPFV
                     GVATCWNEAAPCNIALMRQAQVVKKGVAAVGATPREFCTITVTDGIAMGHAGMKASLP
                     SREVIADSVELTVRGHAYDALIGIAGCDKSQPGMMMAMCRLNVPAIYIYGGSILPGTF
                     KGKPVTIQDVYEAVGKHSVGQMSDEDLDILEQNACPSAGACGAQFTANTMATVSEAIG
                     LALPYSAGAPAPYEIRDKFSMLAGEMIMDLIVKRIRPRDIVTRRALENAAAVVAATGG
                     STNAALHLPAIANECGIEFTLFDVAEIFKKTPYVADLKPGGRYVAKDMFEAGGVPLLM
                     KTLLDHGYLHGDCLTVTGRTIAENLKNVKWNPDQDVVHPADKPLLPTGGVVGLKGNLA
                     PEGAIVKIAGMKTLKFSGPARCFDGEEACFDAVKNRKYKDGDVLVIRYEGPRGGPGMR
                     EMLSTTAALYGQGAGEKVALITDGRFSGATRGFCVGHVGPEAAVGGPIGLIRDGDIIE
                     IDAVKGTLDVKLSADELAKRKGQWKARESEYGSGYLWKYAQQVGPAVNGAVTHPGGAA
                     EKECYADS"
     gene            1978..2790
                     /locus_tag="VIY07_01885"
     CDS             1978..2790
                     /locus_tag="VIY07_01885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6380534.1"
                     /translation="MRTAESLLGALLIGGLLAAAPAHALDGSKTDASVGPPPMTPMEA
                     FRSGANWLKAGETVKAVNSLEYAAEKGHAIAQWKLGRMYAEGDGVTQNDLKAFEYFRR
                     IADSHADDNPDTPQARFVANAFVALGHYYLDGIPKTDIKRDPQRAREMFAYAASYFRD
                     PDAQYYLARLYLNGTGAPRDPRQAARWFGLSAQKGQCEAQAMLGAMLFEGDHVPRQAA
                     RGLMWLALAKDKARTDQAWITKLYDSAMKQASEDERALAAVYLRNWLEMRRE"
     gene            complement(2909..3700)
                     /gene="xth"
                     /locus_tag="VIY07_01890"
     CDS             complement(2909..3700)
                     /gene="xth"
                     /locus_tag="VIY07_01890"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEY6380535.1"
                     /translation="MRIATWNVNSIRQRMDNLQTWLNERQPDIVCLQEIKCTDDAFPR
                     EPFEALGYNVAVHGQKTFNGVALLSKFPFDEVAPGLIGDEADVQARFLEAIVSTKIGV
                     LRVVSIYLPNGNPPQSDKYAYKLNWMARLINFSHERLKLEEPMLLAGDYNVIPTAADV
                     HRPEAWTNDALFLPQTREKFRALVNLGLTDAIRAVSDASDLYTFWDYQAGAWAKDDGI
                     RIDHLLLSPQAADRLVAAGIDRHVRGWDKPSDHVPVYVDLDIVGR"
BASE COUNT          748 a         1123 c         1178 g          666 t
ORIGIN      
        1 tatcccagtt atccccaacg gaatgctggc gccctcgccg ggtagcgtgg caggaacgtt
       61 cagccaaaaa gcacgttctc agtgatgatg ccgggcaaca cctgtgttgg gtttgcaaca
      121 ctgcgagaag atttaagcat acaaccgaat cgcccctgat gacgccgcga ttcggccata
      181 ccattcaacc acatcgatgc cgccaagccg gggaccccgg ctggtcgacc cggcaacgat
      241 ccaccggggc tgggcgacaa ggaacgatgg gcgccaaaag cagtctgaag tcgaaacttc
      301 ccagtcggca cgccaccgag gggccggacc gggcgccgca tcgcgctttc tattacgcga
      361 tgggcttgac gtccgaacag atccatcagc cgtttgtcgg agtggcgacc tgctggaacg
      421 aagccgcgcc ctgcaacatc gccctgatgc gccaggccca ggttgtaaag aaaggcgtgg
      481 ccgcggttgg cgccaccccg cgtgagttct gcacgatcac ggtgaccgac ggcattgcca
      541 tgggtcatgc cggcatgaag gcctcgctgc cgtcacgcga ggtgattgcc gacagcgttg
      601 agctcacggt gcgtggccat gcctatgacg ccctgatcgg aattgccggc tgcgacaagt
      661 cgcaacccgg catgatgatg gcgatgtgcc gcctgaacgt gccggcgatc tatatttatg
      721 gcggctcgat cctgcccggc actttcaagg gcaagccggt caccatacag gacgtgtacg
      781 aggccgtcgg caaacactcg gtcgggcaga tgtccgacga ggacctcgac attctcgagc
      841 agaatgcttg cccctcggcc ggcgcctgcg gtgcgcagtt caccgctaac acgatggcga
      901 cggtatcgga ggcgatcggc ctcgcgctgc cttactcggc gggcgcgcct gcgccttacg
      961 aaatccgcga caagttctcc atgcttgcgg gcgagatgat catggacctg atcgtcaaaa
     1021 ggatccgtcc gcgcgatatc gttacgcgaa gagcgctgga aaacgccgca gccgtcgttg
     1081 ccgcaacagg cggctcaacc aatgctgcgc tgcatctgcc ggcgatcgcg aatgaatgcg
     1141 gcatcgaatt tacccttttc gacgtcgccg aaatcttcaa aaagactcct tatgtcgcag
     1201 atttgaaacc gggtggccgt tatgtcgcca aggatatgtt tgaggctggc ggcgtgccgc
     1261 ttttgatgaa aacgctcctg gatcacggtt atctgcacgg cgactgcctg acggtaaccg
     1321 gacgcacgat tgccgaaaat ctgaaaaacg tgaaatggaa tcccgatcag gatgtcgtgc
     1381 atcctgcaga caagccgttg ctgccgaccg gcggcgtggt cgggctcaag ggcaacctcg
     1441 cgcctgaggg cgcgatcgtg aaaatcgccg gcatgaaaac gctcaaattc agcggcccgg
     1501 cgcgctgctt cgatggcgag gaagcctgct tcgacgcggt caagaaccgc aaatacaagg
     1561 acggcgacgt gctggtgatc cgctacgagg gaccgcgcgg cggtcccggc atgcgcgaga
     1621 tgctttctac aaccgctgcg ctctacggcc agggcgccgg cgaaaaggtc gccttgatca
     1681 ccgacggacg tttctccggc gcaacgcggg ggttctgcgt tggccacgtc ggcccggagg
     1741 ctgcggtcgg gggaccgatc gggctcattc gcgacgggga catcatcgag atcgatgcgg
     1801 tgaaaggtac gctcgacgtc aagctttccg cggacgaact ggccaagcgc aagggccaat
     1861 ggaaggcgcg cgagagcgaa tacggatccg gttacttgtg gaaatacgcg caacaggttg
     1921 gtcccgccgt caacggcgca gtgacgcacc ccggcggcgc ggccgagaaa gagtgttatg
     1981 cggacagctg agagcctgtt gggtgcattg ctgatcggtg gcctgttggc cgccgcgccc
     2041 gcgcacgcgc tcgacggcag caagaccgac gccagcgtgg gtccgccgcc aatgacgccg
     2101 atggaggcgt tccgctcggg cgcgaactgg ctcaaagcag gcgaaaccgt caaggcagtg
     2161 aactcgctcg aatatgccgc cgagaagggc cacgccatcg cgcagtggaa gcttggccgg
     2221 atgtatgcgg agggtgacgg cgttacccag aacgacctca aggcgtttga atatttccgc
     2281 cgcatcgccg acagccacgc cgacgacaat ccggacacgc cacaggcgcg ttttgtcgcc
     2341 aacgcgttcg tcgcccttgg gcactattac ctggatggca ttccaaagac cgacatcaag
     2401 cgcgacccgc aaagggcgcg cgagatgttc gcctatgcgg cgtcgtactt ccgcgatccc
     2461 gacgcgcaat actatctcgc gaggctctat ctcaacggca ccggtgcgcc gcgcgacccg
     2521 cgtcaggcgg cgcgatggtt tgggctttcc gcgcagaagg gccagtgcga ggcgcaggcg
     2581 atgctcggcg ccatgctgtt cgagggcgat cacgttccgc gccaggccgc gcgcggactg
     2641 atgtggctcg cgctcgccaa ggacaaagcg cgcaccgacc aggcctggat taccaagctc
     2701 tatgacagcg cgatgaagca ggcgagcgag gacgagcgcg ccttggcagc ggtgtatctc
     2761 cgcaattggc tcgagatgcg gcgggaatag ttcagacaac aaaactgttt tctgtcatgg
     2821 ccgggcttgt cccggccatc acgtttttgg aaccgccaac agtcaagacg tggatgcgcg
     2881 gcacaaggcc gggcatgacg attgcgagtc accgccccac aatatccaga tccacataga
     2941 cggggacatg gtcggacggc ttgtcccatc cgcgcacgtg gcggtcgatg ccggcggcga
     3001 ccaggcggtc ggcggcttgc ggcgacagca gcagatgatc gattcgaatc ccgtcgtcct
     3061 tggcccaggc accagcctga taatcccaga acgtgtagag atccgacgca tcgctgaccg
     3121 cgcgtattgc atcggttagg ccaagattga cgagagcgcg gaatttctcc cgcgtctggg
     3181 gcagaaagag tgcgtcgttt gtccacgcct ccgggcggtg cacgtcggcg gcggtcggga
     3241 taacgttgta atcgcccgcc aacagcatcg gctcttccag tttaagtcgc tcatgcgaga
     3301 aattgatgag ccgcgccatc caattgagct tgtacgcgta cttgtcgctt tgcggcgggt
     3361 tgccattggg tagatagatg ctgaccacgc gcaacacgcc gatcttggtt gaaacgatcg
     3421 cttccagaaa gcgggcctgc acgtccgcct cgtcgccgat caatccgggc gctacctcgt
     3481 caaatggaaa cttggacagg agcgcaacac cgttaaaagt cttctgccca tgcacggcca
     3541 cgttgtaacc gagcgcctcg aatggctccc gggggaaggc gtcatcggtg catttgatct
     3601 cctgcaggca gacaatgtcg ggctgccgct cattgagcca ggtctgcagg ttatccatgc
     3661 gctggcggat ggaattgacg ttccaggtgg caatccgcat ggtttttggg ggtcc
//
LOCUS       DATDHO010000104         1621 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_449290, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000104 DATDHO010000000
VERSION     DATDHO010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1621
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449290"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..840)
                     /locus_tag="VIY07_01895"
     CDS             complement(130..840)
                     /locus_tag="VIY07_01895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380536.1"
                     /translation="MAERALELDKVRAGYGETVVLEDIRLALGASETVSVIGRNGVGK
                     TTLLATIMGHTTLHGGRVSLHGKDISGIATYRRVTEGLGYVPQEREIFPSLTLRENLE
                     VAARPGPWTMATVFELFPRLAERADNRGNQLSGGEQQMLAIGRALISNPNVLLMDEPS
                     EGLAPVIVEELARAVKRLTQASGLATILVEQNSRLALDIAPRAVVMDRGRIVYDGPSE
                     TLRNDPAKLEQYIGVVKA"
     gene            complement(833..1612)
                     /locus_tag="VIY07_01900"
     CDS             complement(833..1612)
                     /locus_tag="VIY07_01900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380537.1"
                     /translation="MTAALQVEGLNRTFGALPVTRDVNLTLDRGARRALIGPNGAGKT
                     TLVNLITGALKPHSGRVVLNGEDITALSQAYRARRGLARTFQINQLFRGLTVLENLCM
                     TIGERDGHCNNLWRSAGAKREVIDEALGHLDSLRLTDDALKLVRELPYGRQRLVEIAI
                     ALAQRPRVLLLDEPAAGVPSSESHLILDVVAALDPDIAVLIIEHDMDVVFRFAREITV
                     LVQGAVFTQGTPDEIMNNEQVRAVYLGEESHRGARRGGHHG"
BASE COUNT          299 a          512 c          490 g          320 t
ORIGIN      
        1 ctatgaccag agttccttgc tcgcaaggta ccatccatcc gttcgtcccg cgaaagcggg
       61 gacccagaac gttgtttaat tctggattcc cgcttgcgcg ggaaagaacg ggattggttc
      121 gtcgttcctt taagccttca cgacgccaat gtattgttca agctttgccg gatcattgcg
      181 cagcgtctcg ctcggaccgt catagacgat gcggccacga tccatcacta cggctcgcgg
      241 agcgatatcg agcgcgagac gggagttctg ctcgaccaat atcgtggcga gcccgctggc
      301 ctgggtaaga cgcttcaccg cacgcgccag ttcttcaacg atcaccggcg cgagtccttc
      361 cgagggctcg tccatcagca gcacgtttgg attactgatc agtgcgcggc caatcgcgag
      421 catctgctgc tcgccgcccg acagctggtt acccctattg tcggcgcgct cggccagccg
      481 cggaaagagt tcgaacactg ttgccatcgt ccagggtccg gggcgggcgg caacttcaag
      541 attttcgcgc agcgtcagcg acgggaaaat ttcgcgctcc tgcggcacat agccaagtcc
      601 ttcagtgacg cggcgatagg tggcgatgcc ggagatatcc ttgccgtgaa gagatacgcg
      661 cccgccatgc agcgtggtgt gacccatgat agtcgccagc aacgtggtct tgccgacgcc
      721 gttgcgaccg atcaccgata cagtctcgct ggcaccgagc gcaaggcgaa tgtcctcgag
      781 cacgacggtc tcgccgtagc ccgcgcgaac tttgtcgagc tcgagcgccc gctcagccat
      841 ggtgcccccc tcggcgcgct ccacggtggc tttcctcgcc gagatagacc gccctcacct
      901 gctcattatt catgatctcg tcgggcgttc cttgcgtgaa aaccgcgcct tgcaccagca
      961 ccgtgatttc cctggcaaag cggaacacga cgtccatgtc atgctcgatg atcagcaccg
     1021 cgatatcggg atcgagcgcg gccaccacat cgaggatgag atggctttcc gatgacggca
     1081 cacctgccgc cggttcgtcg agcaggagga cgcgaggcct ttgcgcgagc gcaatggcga
     1141 tctccacgag gcgctgtcgc ccatagggca attcgcgcac cagcttgagc gcgtcgtcgg
     1201 tcagccgcag tgaatcgaga tggccgagcg cctcatcgat cacctcgcgt ttcgctccgg
     1261 ccgaacgcca gagattgttg caatgaccgt cacgctcgcc gatggtcatg cacaggtttt
     1321 cgagcacggt cagaccgcgg aagagttgat tgatttgaaa ggtgcgcgcg aggcctcgcc
     1381 gcgcgcggta ggcctggctt agcgctgtaa tgtcctcgcc attgagcacg acgcggccgg
     1441 aatgcggctt gagcgccccg gtgatcaggt tgaccagcgt ggtcttgccg gcgccgttag
     1501 ggccaatcag ggcacggcgc gcgccgcgat caagcgtcag gttgacatcg cgcgtgaccg
     1561 gcaatgcgcc gaaagtgcga tttaatcctt cgacctgcaa tgcagcggtc acgtccgttt
     1621 c
//
LOCUS       DATDHO010000105         2511 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_202353, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000105 DATDHO010000000
VERSION     DATDHO010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2511
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202353"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1989
                     /locus_tag="VIY07_01905"
     CDS             <1..1989
                     /locus_tag="VIY07_01905"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEY6380538.1"
                     /translation="TLTTSRAPEEGVLSALHAVITEAGIEPGTVSVIIHGTTLATNAL
                     IERKGAKTALLTTEGFRDVVEIRHENRFEQYDVNIELPEPLVPRRRRLPIRERVNAQG
                     EILLELDETSVDGAIEKLAADGVEAVAVGFLHSFTNPEHERRVGNAVSRALPRVAVTL
                     SSDVSPEMREYERFSTACANAYLQPLVGRYVANLESELQRAGFRCPMLLMTSGGGITS
                     AETAIRFPVRLVESGPAGGAIFAACIARQNGLDEVVSFDMGGTTAKICLIDKAQPQTA
                     RVFEVARIYRFLKGSGLPLRIPVIEMVEIGAGGGSIARVDSLGRIVVGPESAGSEPGP
                     VCYGKGGTEPTVTDADVMLGRIDPTTFSGGKMALDIGGAERTVAKQVGSPLDLSAEHA
                     ALGISEIVDENMANAARVHAIESGKDLRPRTLIAFGGAAPLHAVRVAEKLGIRRVLVP
                     ANAGVGSAVGLLRAPVAYEVVRSRLMRLGGFEAAVANRLFTDMRSEAEAIVRRGAPDA
                     KLTEQRSAFMRYRGQGHEIGVQLPVREFATADQSLLIELFEAAYRRLYSRSIPGVEIE
                     ILSWVMTLSAPAKGELAKPLPVKANTPKPRGHRQVFDPNRGEFLQVPIFWRPELKPGT
                     ELKGPAVIAEDETSTVVSPLFNARIDRFGYIELSRRET"
     gene            1993..>2511
                     /locus_tag="VIY07_01910"
     CDS             1993..>2511
                     /locus_tag="VIY07_01910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEY6380539.1"
                     /translation="MIDRPNTALGQIHTQIMWNRLIAVVEEQAQTMLRTAFSTSVREA
                     GDLSAGVFDRHGRMLAQAVTGTPGHVNSMANAVKHFLDVYPLVTMKPGDHFITNDPWL
                     TSGHLHDITVVTPSFYQGEAVGLFANTIHVVDIGGLGMGPDGRQVFEEGLSIPIMPLA
                     REGRMNEDLLRMV"
BASE COUNT          494 a          743 c          793 g          481 t
ORIGIN      
        1 accctgacga cgtcgcgcgc gcctgaagaa ggggtgctgt ccgcgttgca cgccgtcatc
       61 accgaagcgg gtatcgaacc aggcacagtg tccgtcatca tccacgggac aaccttggcg
      121 acgaacgcgc tgatcgaaag aaaaggcgcc aaaacagcgc tgctcaccac ggaaggcttc
      181 agggacgtcg tcgagatccg ccacgaaaat cgattcgagc aatatgacgt caacatcgaa
      241 ctgcctgagc cgctggtccc gcggcggcgg cgcctgccga tccgggagcg cgtcaatgcc
      301 caaggcgaga tacttctcga gctcgacgaa accagcgttg acggtgcgat cgagaaactc
      361 gccgccgacg gagtggaggc ggtagcggtc ggcttcctgc acagcttcac caatccggaa
      421 catgagcgca gggtcggaaa cgccgtctcg cgcgcgctcc ctcgcgttgc ggtgacactg
      481 tcctccgacg tttccccgga aatgcgtgag tatgagcggt tttcgaccgc ctgcgccaat
      541 gcatatcttc agcccctcgt ggggcgctac gttgcaaacc ttgagagcga gctgcagcga
      601 gccggctttc gctgccccat gctgctgatg acgtccggcg gcggcatcac cagcgccgaa
      661 accgccattc gttttccggt gcgtcttgtc gaatctggcc ccgccggcgg agcgatcttt
      721 gctgcctgca ttgctcggca aaacggtctc gacgaggttg tgtccttcga tatgggcggc
      781 acgactgcaa aaatctgtct tatcgacaaa gcgcaacctc agacggcgcg ggtcttcgaa
      841 gtggcacgca tttatcgttt tctcaaaggc agcgggttgc cgctgcgcat tccggtgatc
      901 gagatggtcg agattggagc gggcggaggc tcaattgccc gcgtcgactc gcttggacgg
      961 atcgtcgtcg gaccagagag cgcgggctcg gagccggggc cggtgtgcta cggaaaaggc
     1021 ggcacagagc cgacagtgac cgacgcggat gtgatgcttg gacgcattga tcccacaact
     1081 ttctccggcg gcaaaatggc actcgatatt ggcggcgcag aacgcaccgt agccaagcag
     1141 gtaggatctc cactggatct ttccgccgag catgcggcgc tcgggatcag cgagatcgtc
     1201 gatgagaaca tggcgaatgc ggcgagggtg cacgcaatcg agagcggaaa agatcttcgc
     1261 ccgcgcacct tgattgcttt cgggggcgcc gcgccactgc acgccgttcg ggtcgccgag
     1321 aagctcggca tacgccgggt gctggtgccc gcaaacgcag gcgttgggtc cgcggtcggt
     1381 cttctgcgcg cacccgtggc gtatgaagtt gtgcggagcc gcctgatgcg tctcggcggg
     1441 ttcgaggctg ccgtcgcaaa caggctcttt accgatatgc gctccgaagc agaggcaatc
     1501 gtccgccggg gcgcgcccga tgccaagctg accgaacagc gatcggcctt catgcgctac
     1561 cgcgggcagg ggcacgaaat cggcgttcag ctgccggtgc gcgaatttgc aacggccgat
     1621 caatctctat taattgaatt gttcgaagcc gcgtatcgcc ggctctatag tcgctcaatt
     1681 ccgggagtcg aaattgaaat tctgagctgg gttatgacgc taagcgcgcc ggccaaaggc
     1741 gagcttgcca agccgctgcc cgtcaaagcg aacacaccaa agccgcgcgg gcaccgacag
     1801 gtcttcgatc caaaccgcgg tgaatttttg caggtgccga tcttctggcg ccccgagctg
     1861 aagccgggca ccgagttgaa aggtcccgcc gtgattgctg aggacgaaac gtcgactgtc
     1921 gtcagtccgc tgttcaatgc acgcatcgac cggttcggct atattgaact ctctcgtcgg
     1981 gaaacttgaa tcatgatcga ccgtcccaac accgcgctcg gccagattca tacgcaaatc
     2041 atgtggaacc ggctgattgc ggtagtggaa gagcaggcgc agaccatgtt gcggacggcg
     2101 ttcagcacat cggtgcgcga ggcgggcgat ctttccgcag gtgtgttcga tcgccatggg
     2161 cgcatgctgg cgcaggcggt caccggtacg ccgggtcatg tgaattcgat ggccaatgcg
     2221 gtgaagcatt ttctcgatgt ctatccgctg gtaacgatga aaccgggcga tcatttcatc
     2281 accaacgatc cctggctgac gtccggccac cttcatgaca tcacggtggt cacgccgagc
     2341 ttttaccagg gcgaagccgt cggtctgttt gccaacacga tccatgtcgt ggatatcggc
     2401 ggtctcggta tgggacccga cgggcggcag gtgttcgaag agggactatc cattccgatc
     2461 atgccgctcg cgcgcgaggg gcggatgaat gaagatctgc tccgtatggt t
//
LOCUS       DATDHO010000106         9264 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_152931, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000106 DATDHO010000000
VERSION     DATDHO010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 9264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9264
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_152931"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..152)
                     /locus_tag="VIY07_01915"
     CDS             complement(<1..152)
                     /locus_tag="VIY07_01915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N utilization substance protein B"
                     /protein_id="HEY6380540.1"
                     /translation="MSAGPGRNNKDHRKANKRGAARLAAVQALYQMDLAGSGLNEILA
                     EFESHW"
     gene            complement(152..637)
                     /gene="ribH"
                     /locus_tag="VIY07_01920"
     CDS             complement(152..637)
                     /gene="ribH"
                     /locus_tag="VIY07_01920"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEY6380541.1"
                     /translation="MAKGTSKRGAKKRDGLRMLIVEARYYDHISDELLHGATRALDHA
                     GARYDRVTVPGTLEIPAAIAIAMDAARRRRAPYDGVVALGCVIRGETHHFDIVANESA
                     RALMDLAVKERLAVGNGILTVDNEVQAHARARAEEGDKGGVAARAALTMVTLKQTLAW
                     Q"
     gene            complement(716..1321)
                     /locus_tag="VIY07_01925"
     CDS             complement(716..1321)
                     /locus_tag="VIY07_01925"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEY6380542.1"
                     /translation="MFTGIVTDLGEVRSVKPQGGNLHRITIACGYPRAEIVQGASIAC
                     SGVCLTIVDAGEEKGRTWFAVDAADETLRVTTVRRWHEGTKVNLERPLKFGDELGGHL
                     VAGHVDGLAMVAGREDMKEMARFVLRAPSELARFVAAKGSVALDGVSLTVNAVEGDTF
                     SVLIIPHTLRVTTLGELRKDDDVNLEVDTMARYAARLAEMK"
     gene            complement(1347..2468)
                     /gene="ribD"
                     /locus_tag="VIY07_01930"
     CDS             complement(1347..2468)
                     /gene="ribD"
                     /locus_tag="VIY07_01930"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEY6380543.1"
                     /translation="MNQEATPTSDVSSDERFMQLALALGRRNLGRTWPNPAVGAVIVK
                     DGTILARGWTQPGGRPHAEVEALRRARKSAQGATMYVTLEPCSHEGKTPPCADAIIRA
                     GVARVVSALEDPNQEVSGQGHGRLRAKGVAVEVGLGADEARRTHAGHIARVSLGRPHV
                     ILKLAISADGKAGLVGRKPAPITGEAARERVFQMRAAADAILVGIGTVLADDPQLTCR
                     LPGMFERSPVRVVLDEQLTVPLATSVIATVRETPTWVFTSRRPSAIAEEILQQKGCKV
                     FRVDDHGGLLDLQQVLKVLAEHGITRLMVEGGPRVAASFVQVDLVDELVLLRGEKAIG
                     SDGIDPLEGMRLDAVTGRLKPMGRDKLATDTVEYFARAS"
     gene            complement(2465..2950)
                     /gene="nrdR"
                     /locus_tag="VIY07_01935"
     CDS             complement(2465..2950)
                     /gene="nrdR"
                     /locus_tag="VIY07_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEY6380544.1"
                     /translation="MRCPSCGSLDTQVKDSRPTEDSAVIRRRRVCLTCNFRFTTFERV
                     QLRELTVIKRNGRRVPFDRDKLMRSVQIALRKRPVEPERIEQMVSKAVRELESQGESE
                     ISSEAIGEIVMEHLRELDDVAYVRFASVYRNFREAKDFRAALDELSGDDDGRPAASAR
                     K"
     gene            complement(3095..4405)
                     /gene="glyA"
                     /locus_tag="VIY07_01940"
     CDS             complement(3095..4405)
                     /gene="glyA"
                     /locus_tag="VIY07_01940"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014889958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEY6380545.1"
                     /translation="MSATSSPKRASEIETLFSAALDAVDPEIDDAIKLELGRQRHEIE
                     LIASENIVSRAVLEAQGSVLTNKYAEGLPGKRYYGGCQYVDIVERVAIERVTRLFGCK
                     FANVQPHSGASANAEVFLALLQPGDTFMGLNLAAGGHLTHGSPVNMSGKWFKPVPYGV
                     RRDDHRIDMEEVARLAREHRPKLIIAGGSAYPRIIDFRGFREICDSVGAFLMVDMAHF
                     AGLVAAGVHPSPFPHAHVVTTTTHKTLRGPRGGVILSDNEETAKKLNSAVFPGMQGGP
                     LMHVIAAKAVAFGEALRPTFRTYARSVVENAKALAERLKSDGLDIVSGGTDTHLMLVD
                     LRPKRLTGKVAEAALGRAHITCNKNGIPFDPEKSTVTSGIRLGTPACTTRGFGIAEFR
                     QVGDMIVEVLDVLSQKHVEEDSLVEAAVRAKVKTLIERFPIYQD"
     gene            complement(4609..5121)
                     /locus_tag="VIY07_01945"
     CDS             complement(4609..5121)
                     /locus_tag="VIY07_01945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEY6380546.1"
                     /translation="MKAVAKTVEPAAREAQLDHIRPQYLEALTLVERLHRRLLDVIKD
                     EFDRRGRSDINSVQALLLYNIGDKELTAGELRTRGYYLGSNVSYNLKKLVEMAFLDHQ
                     RSRVDRRSVRIKLTDKGREVRDIIEGLYQKHVRTVEQVGGINAEEFSTLNKSLHRLER
                     FWTDQILYRL"
     gene            complement(5336..6220)
                     /gene="mmsB"
                     /locus_tag="VIY07_01950"
     CDS             complement(5336..6220)
                     /gene="mmsB"
                     /locus_tag="VIY07_01950"
                     /EC_number="1.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008442 - 3-hydroxyisobutyrate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006574 - valine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HEY6380547.1"
                     /translation="MARVGFIGLGNMGLPMAQNLLKAGHQVEGVDVNSAAIEKLKAAG
                     GIGVETAKSAAARVDVVITMLPSGKEVREVYLGSSGIVENANPGTLLIDCSTIDVETA
                     RADAAEAEKKGLLMLDAPVSGGVGGATAATLTFMVGGSAQAFARAESILQKMGKTIVH
                     AGGAGNGQAAKICNNMILGVSMIAVSEAFVLAEKLGLDHQKLFDISSKSSGQCWSLTS
                     YCPVPGPVPTSPANRDYQAGFTAAMMLKDLKLSQEAAKMSGTKTELGGDAARIYSEYV
                     ASGEASRDFSGIIRFIRG"
     gene            complement(6248..6697)
                     /locus_tag="VIY07_01955"
     CDS             complement(6248..6697)
                     /locus_tag="VIY07_01955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6163 family protein"
                     /protein_id="HEY6380548.1"
                     /translation="MNRPAAPENLRTLEPVQEHEGDRSSGRWTRRLVLFLRAMAAVSM
                     IKGLYHWAQVIGISFGEALPFEYHSIAWQTATVFFAVIDLVAAVGLWLAAAWGAVIWL
                     TAVASMLAVEIFFPQVFGGGWLTGVLEGALLILYLWLALKSAQEHPQ"
     gene            complement(6694..7752)
                     /locus_tag="VIY07_01960"
     CDS             complement(6694..7752)
                     /locus_tag="VIY07_01960"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY6380549.1"
                     /translation="MSENEILFERRGAAGIVTLNRPKALNAVTHAMVVALRAQLDRWA
                     DDPAVTRVVVTAAGDRAFSAGGDIRALYELGKSGRQDEALQFWRHEYPLNAAIKNYRK
                     PYVALIDGIAMGGGVGVSVHGSHRVAGDGFSFAMPEVGIGFFPDVGATWFLPRMPGEL
                     GTYCALTGERFGISDAVTGGIATHRVSSARFPALVDGLTGTVSVDAVLSAFGEPVREG
                     TIAQRRAAIDRLFAGDMVETILAALDREAASGGVDSDWAKQTAVVIRTKSPLSLKLAL
                     EQVRRGKSWDFDTCMRTEFRIVSRIIHGHDFYEGVRAVIVDKDNRPRWRPATLPEVSE
                     ADVERHFAPLGADELVLP"
     gene            complement(7760..8152)
                     /locus_tag="VIY07_01965"
     CDS             complement(7760..8152)
                     /locus_tag="VIY07_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1772 domain-containing protein"
                     /protein_id="HEY6380550.1"
                     /translation="MFAGGALYVSLAEQPARLRLDTPALLTEWQPSYERGAIMQASLA
                     IVSGALGVLAFLLSYDWRWLVGAALILAPWPYTMLIIMPTNRMLKATAPEQATEQTRG
                     LIVQWGRLHWGRSALGVIAVAAYLWALS"
     gene            complement(8213..8779)
                     /locus_tag="VIY07_01970"
     CDS             complement(8213..8779)
                     /locus_tag="VIY07_01970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380551.1"
                     /translation="MEQLPRVYLSRDEMMKRIARFKDLNGFDGGLPDSKMPGCERTLF
                     NVIGFQPPKGSGGAVTSPVGDHAAQLAAIKISEGFNLGYCKAKPGHGPEMHNHDTNET
                     FIPMTGTWRASWENEKGQVEYVDLGPLDVVSFPPGMIRRFENVTKGDPNQESILMFVI
                     GGDAPRAEFTDQAMQRLEEAGVWPAQHA"
     gene            complement(8833..>9264)
                     /locus_tag="VIY07_01975"
     CDS             complement(8833..>9264)
                     /locus_tag="VIY07_01975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006931548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6380552.1"
                     /translation="LDGGRLNIGACSIGGAQFCLDRTIGYMKDRKQFGSRLADFQALQ
                     FRIADYATELEAARLLLHRAAVAVGEGEPMATRLAAQAKRLATDTGFEVVNGCLQLHG
                     GYGYLRDHPIERVLRDVRVHQILEGTNEIMRMIVSRAMLGN"
BASE COUNT         1769 a         2986 c         2746 g         1763 t
ORIGIN      
        1 atccagtgac tctcaaattc ggcaaggatt tcgttgaggc cgctgccggc cagatccatc
       61 tgatagagcg cctgcacggc cgcaagtcgg gcagcgcccc gcttgttcgc cttgcggtga
      121 tccttattgt tgcgtccggg cccggcgctc atcactgcca cgctagcgtt tgcttgagcg
      181 taaccatggt caacgctgca cgggcggcaa cgccgccttt gtcgccctcc tcggcccgag
      241 ctcgggcatg tgcctgcacc tcattgtcga ctgtgaggat gccattgccg acggcgaggc
      301 gctccttcac cgcaagatcc atcagcgccc gcgcggattc gttcgcgacg atatcgaaat
      361 ggtgagtctc gccccggatg acgcagccaa gcgcaaccac cccgtcgtag ggcgcacggc
      421 ggcggcgcgc ggcatccatg gcaatcgcga tggcggctgg gatttcgagc gtgcctggca
      481 ctgttacgcg atcatagcgc gcgcccgcat gatccagcgc gcgcgtggcg ccgtgcagaa
      541 gctcatcgga aatgtgatcg tagtagcgcg cctccacgat cagcatgcgc aggccgtcac
      601 gctttttcgc gccgcgctta cttgtgcctt tggccatcta cccaaattcc tggtttcagc
      661 gcggtggtag caaggggtgc gagaatgaac aaggtggtag gccacgccga cctgcttact
      721 tcatctccgc taaccgcgcc gcgtagcggg ccatggtgtc gacttcgaga ttgacgtcat
      781 cgtccttgcg caattcacca agcgttgtga cgcgcaatgt gtgcgggata atgagcaccg
      841 aaaacgtgtc gccttccacg gcgttgacgg tgagggagac cccgtcgagc gcaaccgatc
      901 ctttggccgc gacaaagcgc gcaagctcgg atggcgcacg cagcacgaac cgggccatct
      961 ccttcatgtc ttcgcggccc gccaccatcg caaggccgtc cacgtgaccc gccaccagat
     1021 gcccgccgag ctcgtcgcca aatttaagcg ggcgttcgag attgactttg gttccctcat
     1081 gccagcggcg cacggtcgtg acccgaagcg tctcgtcggc ggcgtcgacc gcgaaccagg
     1141 tacggccctt ttcttcccct gcatcgacga tggtcaagca cacgcccgaa cacgcgatcg
     1201 aggcaccctg aacgatctcg gcgcgcggat agccgcatgc aatcgtaata cggtgcaggt
     1261 tgccgccttg cggcttcacc gaacgcactt cgcccagatc ggtgacgatg ccggtaaaca
     1321 tcagagggag ttccgttgcg cggccatcat gacgctcgcg caaagtactc gacggtgtcg
     1381 gtagcaagtt tgtctcggcc cataggtttg agccgacctg tcacggcatc gagccgcata
     1441 ccctccagcg gatcgatgcc atcgctaccg atcgctttct ctccacgcaa cagcaccaac
     1501 tcgtccacaa gatccacttg gacgaaactt gccgcaaccc ttggtccccc ttcgaccatc
     1561 agtcgcgtga tgccatgctc ggcgaggact ttgagaacct gttgcagatc gagaaggccg
     1621 ccatggtcgt cgacacgaaa gaccttgcag cccttctgct gcaggatttc ctcggcaatc
     1681 gccgatggcc tgcgcgaggt aaagacccag gttggcgttt cgcgcacggt cgcaatcacg
     1741 gaagtcgcga gcggcacggt tagctgctcg tcgagcacca cgcgcaccgg ggagcgctcg
     1801 aacatgcctg gcaatcggca ggtcaactgc gggtcgtcgg ccagcaccgt gccgatgccc
     1861 accaggatgg cgtcggcagc ggcgcgcatc tggaatacgc gttcgcgagc ggcctccccg
     1921 gtaatcggcg ccggtttgcg gccgacaagg cccgccttcc cgtcggcgga gatcgcgagc
     1981 ttgagaatta cgtgcggccg tccaaggctg acgcgcgcga tgtgaccggc atgtgtgcgg
     2041 cgcgcctcat ccgcgccgag accgacctcg acggcgactc ctttggcgcg caggcgcccg
     2101 tggccctgtc cggagacctc ctggtttgga tcttcgagtg ccgacaccac ccgcgcgacg
     2161 ccggcgcgaa tgatggcatc cgcgcagggc ggcgttttgc cctcgtgcga gcaaggctcg
     2221 agtgtcacgt acatcgtcgc gccctgcgct gatttccttg cgcggcgcaa tgcctccact
     2281 tcggcgtgcg ggcggccgcc cggttgcgtc cagccgcgtg cgagaatcgt gccgtccttc
     2341 acgataaccg cgccaaccgc cggattgggc caggtccgcc cgagattgcg gcgaccgagt
     2401 gcaagcgcga gctgcatgaa gcgctcgtcc gaggaaacgt cagacgtcgg ggtcgcttct
     2461 tgattcattt gcgcgcgctg gcggcgggcc ggccgtcatc atcgcccgac aattcgtcga
     2521 gagcagcgcg gaaatccttc gcctcgcgaa agttgcgata gaccgaggca aagcgcacgt
     2581 aggcgacgtc gtcgagttcg cgcaagtgct ccatgacgat ctcgccgatc gcttccgacg
     2641 aaatttcgct ctcgccctgg ctctccagct cgcgaacggc tttcgagacc atttgctcga
     2701 tacgctctgg ctcaaccggg cgcttgcgca acgcgatctg caccgagcgc atcagcttgt
     2761 cgcggtcgaa gggcacgcgg cgcccgttgc gcttgatcac ggtcagctcg cgcagttgca
     2821 cccgctcgaa cgttgtgaaa cggaaattgc aggtcagaca aacgcggcgg cggcggatga
     2881 ccgccgaatc ctcggtcggg cgcgaatcct tcacctgcgt atcgaggctt ccgcaactcg
     2941 ggcaacgcat agcgaacctt tcactgtcat tccggggcgc ccgcaaagcg ggcgaaccag
     3001 gaatccagat gcagatgccg cgcttcagtc tggattccgg gtccggcgct acgcgccgtc
     3061 ccggaatgag agcggaaaaa cggcaacagc atctttaatc ctgataaatc gggaatcttt
     3121 caatcaatgt cttcactttg gcgcgcaccg cagcctccac gagagaatct tcctcgacgt
     3181 gtttttgcga caggacgtcg aggacttcga caatcatgtc gccgacctgg cggaattccg
     3241 cgatcccaaa tcccctggtc gtgcacgcgg gtgtgccgag ccgaatgcct gacgtgaccg
     3301 tcgacttttc cggatcgaat ggaatcccat tcttgttgca ggtgatatgg gcccgaccca
     3361 acgctgcttc tgcgaccttg ccagtcagcc gttttggccg cagatcgacc aacatcagat
     3421 gcgtgtcggt gccgccggac acgatgtcga gcccgtccga cttcaaccgt tcggccagcg
     3481 ccttcgcatt ctcgacgaca ctgcgcgcgt aggtgcggaa ggtcggccgc agcgcctcgc
     3541 cgaatgcgac cgccttggca gcgatgacgt gcatcaacgg tccgccctgc atgccgggga
     3601 atacggcgga gttgagcttt ttcgcagtct cctcgttgtc ggaaaggatc acgccgcctc
     3661 gcggtccgcg cagtgttttg tgggtcgtcg tcgtgacaac atgcgcatgc gggaatggcg
     3721 aaggatgcac gccggcggca accaagccgg cgaaatgcgc catgtcgacc atcaggaatg
     3781 cgcccacgct gtcgcagatt tcgcgaaaac cgcgaaaatc gatgatgcgc ggataggccg
     3841 aaccgccagc gataatcagc ttcggcctat gctcacgcgc gaggcgcgcg acttcttcca
     3901 tgtcgatgcg atgatcgtct cgccgcactc cgtagggcac gggcttgaac catttgcccg
     3961 acatgttgac cggcgagccg tgggtgaggt gcccgcccgc cgcaaggtta agccccatga
     4021 acgtgtcacc gggttgcagc agagcaagaa acacctccgc atttgccgag gcacccgaat
     4081 gcggctgcac gttcgcgaac ttgcacccga acaacctggt gacacgctcg atcgcaaccc
     4141 gctcgacgat gtcgacatat tggcagccgc cgtaatagcg cttgccggga agtccttcgg
     4201 catacttgtt ggtcagcacc gagccttgcg cttccagaac cgcgcgcgag acgatgttct
     4261 cggaagcaat cagctcgatc tcgtgacgtt gacgccccag ctcgagtttg atcgcgtcgt
     4321 cgatttcggg atctacagca tccagggctg ccgagaagag ggtctcgatt tcgcttgcgc
     4381 gcttggggct cgacgtcgcc gacattcgca atctcctggc gccgcgagcg gccggcgccg
     4441 acaaacgacc aaggtccggg gttgggcggc aataccatat cggccgcgac ccgccaagca
     4501 ttgggctgtg gagggttctc gagcccaata tctagggatc gggcgccctg tgcaaaaaga
     4561 aaccccggcg tgaccgccgg ggctgagtcg atccacccgc agtggaattt atagccggta
     4621 gaggatctga tcggtccaga accgctcgag ccggtgtagc gacttgttga gcgtggagaa
     4681 ttcctcggcg ttgatgccgc cgacctgctc aaccgtgcgc acatgctttt ggtagagccc
     4741 ctcgatgata tcgcgcacct cgcgcccctt gtcggtcagc ttgatgcgaa ccgagcgacg
     4801 gtcaacgcgc gaacgctggt gatcgaggaa cgccatttcg acaagcttct tgagattgta
     4861 ggaaacgtta gagccgagat agtagccgcg cgtgcgcagc tcgcctgcgg tcagctcctt
     4921 gtctccaatg ttatagagca gcagagcctg caccgaattg atatcggagc ggccgcgccg
     4981 atcgaattca tccttgatga cgtcgagcaa tcggcgatgc agccgttcga cgagtgtcaa
     5041 cgcctccagg tactgtggcc gaatgtgatc gagctgcgcc tcgcgtgcgg cgggctcgac
     5101 cgtcttcgcg acggctttca tgttcaacgc cccttgcgtt ttatgtgtcc ccggttgcaa
     5161 ggccctgttt ccccgctccg gatgtgccgc acactagggg gcgcaatcta aaatcggctt
     5221 aaataacacc ataaagatta ggtttatttg caacggtgaa cgatcccttg accataaaaa
     5281 ttttaacaag tgcgcaaggc ttcgttcact ctgatggcaa gcgtccgacg cgaactcagc
     5341 cgcgaatgaa acgaatgatg ccggaaaagt cgcgcgatgc ctccccgctc gcgacatatt
     5401 ccgaatagat acgcgcagcg tcgcccccca gttccgtttt ggttccgctc atctttgcgg
     5461 cctcctgcga cagtttcaaa tccttaagca tcatcgctgc ggtgaacccg gcctgatagt
     5521 cgcgattggc cggcgaggtg gggactggtc ccggcacggg gcagtagctg gtcaatgacc
     5581 agcactggcc agacgatttc gacgaaatgt cgaacagctt ctggtgatcg agcccgagtt
     5641 tttcggcgag gacgaatgct tcactcaccg caatcatgga cacgcccaaa atcatgttgt
     5701 tgcagatttt ggctgcctgg ccgttgccgg ccccgccggc gtgcacgatc gtcttgccca
     5761 tcttctgcag gatcgattct gcacgcgcaa acgcctgcgc gcttccgccc accatgaaag
     5821 tgagcgtcgc cgcggtcgcc cccccgacgc cgcccgaaac gggtgcatcg agcatcagta
     5881 agcctttctt ctcggcttcg gctgcgtccg cgcgcgcggt ctcgacatcg atggtcgagc
     5941 aatcgatcag caacgttccg gggttagcat tttcgacgat accagaagag ccgagataga
     6001 cctcgcgcac ctccttgccc gaaggcagca tcgtgatcac gacatcgacc cgtgccgctg
     6061 cgcttttcgc cgtttcgaca ccgataccgc ccgcagcttt gagtttttcg atagccgccg
     6121 aattgacgtc gacgccttcg acctgatgac cggccttgag caggttttgc gccatcggca
     6181 gtcccatgtt gccgaggccg ataaatccga cgcgcgccat gacaccctcc acgatctttc
     6241 gatcctttta ctgcggatgc tcttgtgcgg attttagtgc cagccaaagg tagagtatga
     6301 gcagtgcgcc ttccagaacg cctgtcagcc aaccaccgcc gaagacctgc ggaaaaaata
     6361 tttccacggc cagcattgac gccacggcgg tgagccagat cacggcgccc caggcggccg
     6421 caagccagag gccgactgct gcaaccagat cgatcacggc aaaaaacacc gtcgcggtct
     6481 gccatgcgat cgaatgatac tcgaagggca gcgcttcgcc aaagctgatg ccgatcacct
     6541 gggcccaatg gtagaggccc ttgatcatcg agaccgccgc cattgctcgc agaaacagca
     6601 ccaggcgtcg ggtccaacgg ccgctggaac gatcgccttc gtgctcctgc accggctcga
     6661 gcgtacgaag attctcgggt gcggcaggcc tgttcacggc aacaccagtt catcggcgcc
     6721 gagcggcgca aaatggcgct cgacgtccgc ctcgctgacc tcgggcagcg tggccggacg
     6781 ccaacgtggc cggttgtcct tgtcgacgat cacggcgcgt acgccttcat agaaatcatg
     6841 tccgtgaatg atgcgggaca ctatgcggaa ttccgtgcgc atgcacgtat cgaaatccca
     6901 ggacttgccg cggcgcacct gctccagcgc cagtttaagg cttagcggag actttgtgcg
     6961 gatgacgact gccgtttgct tcgcccaatc cgagtcgacc ccgcccgagg ccgcttcgcg
     7021 atcgagcgcg gcaagaatgg tctcgaccat atccccggcg aacaggcggt cgattgcggc
     7081 gcggcgctgc gcaattgtac cctctctcac aggttcgcca aacgcggaca gaaccgcatc
     7141 aaccgagacg gtgccggtca ggccgtcgac cagcgcggga aaacgggcag aggaaacccg
     7201 gtgcgtggca atgccgcctg tgacggcatc cgaaattccg aaacgctctc ctgtcaacgc
     7261 gcagtaggtc ccaagctcgc cgggcatgcg cggcagaaac catgtggcgc cgacatcggg
     7321 gaagaaaccg atgccgactt ccggcatggc gaaggagaag ccatctccgg caacgcgatg
     7381 cgagccatgg accgacacgc cgacgccgcc tcccatcgca atgccgtcga tcaatgcaac
     7441 gtatggcttg cggtaattct tgatggccgc attaagagga tattcgtgac gccagaattg
     7501 cagagcttcg tcttgccggc ctgacttgcc gagctcgtat agggcgcgaa tgtcgccgcc
     7561 ggcagaaaat gcacgatcgc ctgctgcggt aaccaccacc cgcgtgacgg cgggatcgtc
     7621 agcccagcgg tcgagctgtg ctcgcagcgc aaccaccatg gcatgggtga cggcattgag
     7681 cgccttcggc cggttgagcg ttacgatgcc cgcggcgccg cgccgttcga acaggatttc
     7741 gttttcgctc acgccggcct caactcagcg cccaaagata ggcggcgacc gcgatcaccc
     7801 cgagcgcgct gcgaccccag tgcaaccgtc cccactgcac gatcagcccg cgagtctgct
     7861 cggtggcctg ttccggcgcg gttgccttga gcatgcgatt ggtcggcatg atgatgagca
     7921 tcgtataggg ccagggcgcg aggatcagtg cagcgcccac aagccagcgc cagtcatagc
     7981 tgagcaaaaa tgcgagcaca ccgagcgcgc cggatacgat tgccaggctt gcctgcatga
     8041 ttgccccacg ctcgtaactt ggctgccact cggtcagtag cgccggggta tcgagcctca
     8101 atcgtgccgg ctgctcggcg aggctgacat agagcgcgcc gccggcgaac atcgcggcgg
     8161 tcgtcaaggc cagctcgcct gcccacgtcg caagagtcac attgccctct gcttaggcgt
     8221 gttgcgccgg ccacacgccg gcctcttcca gccgctgcat cgcctgatcg gtgaattccg
     8281 cgcgcggcgc atccccgcca atcacgaaca tcaggatcga ttcctggttc gggtcgcctt
     8341 tggtgacatt ctcgaaacgg cggatcatcc ccggcggaaa ggaaacgaca tcgagcgggc
     8401 cgagatcaac gtattcgacc tgacccttct cgttttccca actcgcgcgc caggtaccgg
     8461 tcatcgggat gaaagtctcg ttggtgtcat gattatgcat ctccggccca tggccgggct
     8521 ttgccttgca gtagccgagg ttgaatccct cgctgatctt gatcgcggca agctgggccg
     8581 cgtggtcgcc aaccggagag gtcaccgctc ctcccgagcc tttcggcggc tgaaagccga
     8641 tcacgttaaa gagcgtccgc tcacagcccg gcattttgct gtcgggcaat ccgccatcga
     8701 agccgttgag atccttgaag cgcgctatgc gcttcatcat ctcgtcgcgc gaaagataaa
     8761 ctctcggaag ctgctccatg acgccctcct gatttctact tcgtgcgcga ccgaaatccg
     8821 gtcattggcc tgctagttcc ccagcatagc gcggctcacg atcatgcgca tgatctcatt
     8881 ggtgccctcg agtatttgat ggacgcgcac gtcgcgcaag acacgctcaa tcgggtgatc
     8941 gcgcagatag ccatagccgc catgcaactg gaggcagcca ttgaccacct cgaatcccgt
     9001 atcggtggca agacgcttgg cctgagcggc aagccgcgtc gccattggct cgccctcgcc
     9061 caccgcaact gcagcgcggt gcaagaggag tcgcgccgcc tccagctccg tcgcataatc
     9121 cgcaatgcgg aattgcaacg cctggaaatc ggcaaggcgc gagccgaact gcttgcggtc
     9181 tttcatgtaa ccgatagtgc gatcgagaca gaactgcgcg ccgccgatcg aacacgcgcc
     9241 aatgttcagt cgtccgccat caag
//
LOCUS       DATDHO010000107         2590 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_400749, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000107 DATDHO010000000
VERSION     DATDHO010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2590)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2590)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2590
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400749"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            249..>2590
                     /locus_tag="VIY07_01980"
     CDS             249..>2590
                     /locus_tag="VIY07_01980"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY6380553.1"
                     /translation="MRRPLLAYAIAISALAAVVLLRWLLDPLLGDSLPLVTLYGVVAI
                     AVWVGGYRPALLVGILGYIACNYLFIAPRIEVGPFDVQTLVGLLAYAFTCLFIICIGE
                     AMRFAQMRANERGELLRITMGSIGDAVITTDTDGRVTYLNPVAETLTGWKTLDAAGQP
                     LDTVFRIVNEQDGRSVESPVTRALREGAIVGLANHTVLIGKDGAERTIADSAAPIKDD
                     YGRVVGCVLIFRDISDRRRWEKNEAERLLSARLLASIVESSDDAIISKSLAGIIQSWN
                     AGAERLFGYSAKDAVGRHISLIIPPDRIAEEDHIIARLKAGHRVEHYETERVRRNGEP
                     ISVSLTISPIRDAAGNVVGASKIGRDITDRKRAEADRQKFVTLVENSTDFIGMYDLEG
                     VPFYINPAGLEMVGLEGIAEAQRVHVRDFFFPEDQARIMDELLPSVIEKGHAEVEVRF
                     RNFRTQQARWMAYKILAVTDAKGRRIAFATVSQDIAERRRLEDNLLKLAADLSAVDRR
                     KNEFLATLAHELRNPLAPLRYMLELLKRTDADSETRAQAVDTMQRQLSQLVRLVDDLL
                     DLNRITHDRLELRKRPIEIAAVIEQAIESCRPLAESAGHEVRTSMPSESIYVHADETR
                     LTQVLANLINNSCKYTNPGGKIEVTAKRDGDDVLVMVSDNGIGIAQDKLDDIFDMFTQ
                     IDQSAERSRGGLGIGLTLVKRLVQMHGGAVEARSAGKGLGSEFVVRLPIMFDRPDMTS
                     PTEAEAEEEVSPRRILVVDDNKDAAASLVLLLQMTGHETY"
BASE COUNT          551 a          732 c          801 g          506 t
ORIGIN      
        1 cgaggccgcg cacggcggtt gcaggtcggg aagcaaagga aaggcctgca acggccgttt
       61 ctcgtcgatc gctacgtcgg ctcaggtcgc ttcccctttg cgctagcgct gcggagccac
      121 gcagcgactt gccgaaacct ctcgaaatga gagcccgcgg ataagggatt aaactgaagc
      181 agccctatag aaagaggcct cctgccaacc gtgttggtca cttcaacgtt cccgggcaag
      241 ggaaagacat gcggcgcccg ctcttagcct acgcaatcgc gatcagcgcg ctcgctgcag
      301 tggtgctgct tcgctggctg ctcgatccac ttctcggcga tagcctaccc ctcgtaacgc
      361 tgtacggcgt tgtagcgatt gccgtgtggg taggcgggta ccgtcccgcg ctgctcgttg
      421 gaatcctcgg ctatattgca tgcaactatc tcttcatcgc ccctcgcatc gaggttggtc
      481 cgttcgatgt ccaaactttg gtcggcctgc tcgcgtacgc tttcacatgc ttgttcatta
      541 tctgcatcgg cgaggcgatg cgctttgctc aaatgcgggc caacgagcgt ggcgaactgt
      601 tgcgaatcac catggggagt attggggacg cggtcatcac tacggatacc gacggtcgtg
      661 tcacttacct caacccagtt gcggagactc tgactggctg gaagacccta gacgcggcgg
      721 gacaaccgct cgataccgtg tttcggattg tcaacgagca agacgggcgg tcggttgaaa
      781 gcccggtgac ccgcgcgttg cgcgaaggcg ccatcgtcgg tttggcgaac cacactgtac
      841 ttatcggaaa ggatggtgcc gagcgaacaa tcgctgacag cgcggcgccg atcaaagacg
      901 attacgggcg cgtcgtgggt tgcgtgctga tctttcgaga tatctctgac cggcggcgat
      961 gggagaaaaa cgaggccgag cgtctgctct ctgctcggtt gcttgcgtcc attgtcgagt
     1021 cgtcggacga cgcgatcatc agcaaatcgt tggcaggcat cattcaaagc tggaatgccg
     1081 gcgcagaaag actgttcggc tattccgcca aagacgctgt gggccgtcac atttctctca
     1141 tcattcctcc tgatcgcatc gcggaagagg atcacatcat tgcacgcctg aaagccgggc
     1201 accgcgtcga gcactacgaa accgagcgcg ttcgcagaaa cggagagcct atctcggttt
     1261 cgctcacgat ctcgccgatc agggatgcgg cgggcaacgt cgttggcgcg tcgaagatcg
     1321 ggcgcgacat caccgatcgc aagcgggccg aggccgatcg gcagaagttc gtcacgctgg
     1381 tagaaaacag caccgacttc atcggcatgt acgatttgga aggcgtcccg ttctatatca
     1441 acccggccgg gctcgagatg gtcggactgg aagggatcgc ggaggcacag cgcgtccacg
     1501 tacgcgattt cttttttccc gaggatcaag caagaatcat ggacgaattg ctcccgtctg
     1561 tgattgagaa gggccacgcc gaagtcgagg tccgtttccg caatttccgc actcagcaag
     1621 cgcggtggat ggcgtacaaa atcctggcgg tcaccgatgc caaggggcgc aggatagcgt
     1681 ttgcgacagt gagccaggac attgcggagc ggcgccggct tgaagacaat ctgctgaagc
     1741 tagcggccga cctgtccgca gtcgatcgtc gcaagaatga gtttctggcg acgttggctc
     1801 acgagctgcg aaatccgctt gctccgttgc gctacatgtt ggagctcctg aagcgcactg
     1861 acgccgacag cgaaacgcgc gcgcaagccg tcgacacgat gcaacgccag ttgagccaac
     1921 tggtccggct cgtcgacgat ctcctcgacc tgaatcgcat tacccacgac cggctggagt
     1981 tgcggaaacg cccgatcgaa atcgctgcgg tgatcgagca ggcgatcgaa tcgtgccggc
     2041 cgctcgccga gtccgcgggt catgaagtgc ggacaagtat gccttccgag tcgatctatg
     2101 tgcacgctga cgagacgcgc ctgacccagg tattggctaa cttgatcaac aacagctgca
     2161 aatacacgaa tccgggcggg aagattgagg tgaccgcaaa gcgtgatggg gacgatgtct
     2221 tggtcatggt aagcgacaac gggataggca ttgcacagga caagctggac gacatcttcg
     2281 acatgttcac gcaaatcgac cagtccgcgg agcggtcgcg gggaggacta ggcatcggcc
     2341 taacgctcgt gaagcgactg gttcagatgc acggcggggc ggtggaggcg aggagcgcag
     2401 ggaaaggact gggaagcgaa ttcgtggtgc gccttcccat aatgtttgac cgccccgata
     2461 tgacaagtcc aacggaggcc gaagcggaag aggaagtctc gccgcgccgc attctggttg
     2521 tcgatgacaa caaagacgct gcggcctcac tcgtcctact gttgcaaatg acagggcatg
     2581 aaacttatat
//
LOCUS       DATDHO010000108         1984 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_153039, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000108 DATDHO010000000
VERSION     DATDHO010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1984
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_153039"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VIY07_01985"
     CDS             complement(<1..212)
                     /locus_tag="VIY07_01985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380554.1"
                     /translation="MTVYGSAGAKQVAFMIGYFRPVCALITLTFATQASAAQCGGEFQ
                     TFLSAMGRDAQAAGVPRSVIDQAFAGV"
     gene            416..709
                     /locus_tag="VIY07_01990"
     CDS             416..709
                     /locus_tag="VIY07_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEY6380555.1"
                     /translation="MPKAYWVTTYREIKDPAKLAAYAKLAPLALAPFGVRYLCRGNPN
                     ATYESGLKERLVVSEFPSLDKAIAGHDSPGYQEALRALGDGAVRDIRIIEGLE"
     gene            complement(788..1066)
                     /locus_tag="VIY07_01995"
     CDS             complement(788..1066)
                     /locus_tag="VIY07_01995"
                     /inference="COORDINATES: protein motif:HMM:NF020317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HEY6380556.1"
                     /translation="MATYLLFGRYSADALKGISAKRSDEAKALIKKHGGELKSAYATL
                     GGIDLVMIADLPDNSRAIAASTALAKLTGIAFTTAPAVSIEEFDKLVG"
     gene            1173..1355
                     /locus_tag="VIY07_02000"
     CDS             1173..1355
                     /locus_tag="VIY07_02000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3008 family protein"
                     /protein_id="HEY6380557.1"
                     /translation="MPAKSKKQQMAAGAALAAKRGERPVSSLKGASRQMAQSMNEKQL
                     EEFAHTRRKGLPRKKT"
     gene            complement(1359..>1984)
                     /locus_tag="VIY07_02005"
     CDS             complement(1359..>1984)
                     /locus_tag="VIY07_02005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="amidinotransferase"
                     /protein_id="HEY6380558.1"
                     /translation="QRQGEAPVFAAAFHALRVRGLIDEVVTLPQGVALEGAGDCLWDP
                     HRRMFWMGSGFRTDAAAREIVAAEFGVPCVALGLADPSYYHLDTAFSPLPCGAVMYYP
                     GAFTAEALAQIHARVAPEQRIELSPADAARFAANAVSFGRTILLSSCSEALRGRLDDR
                     GYKVVKTPLAAFLRSGGSACCLTLRLDHRSAAVQAVPDVKVKLARGR"
BASE COUNT          390 a          650 c          627 g          317 t
ORIGIN      
        1 acgccggcga aggcctggtc gatcacgctg cgcgggacgc cggcagcctg agcatcgcgc
       61 cccatggcgg aaaggaaggt ctgaaattcg ccgccgcatt gggcggcgga ggcttgggtt
      121 gcaaatgtca gtgtaatgag cgcgcagact ggcctgaaat atccgatcat gaaagcgacc
      181 tgttttgccc ccgctgatcc atacactgtc atagcggggc ttgtcccgcc cagaccttgc
      241 tgtcatgccc gcctttatgc cgccatccac gtcttcgttg tcgcgcagca aggaagacgt
      301 ggatggccgg gacatcctcg ggtcaagccc gaggacaggc gccccggcat gacgtgtgaa
      361 gctttcacac gtcatcacgc gcaggctagg atcgccgggt cacggaggag caaccatgcc
      421 caaagcctac tgggtcacca cctatcgcga gatcaaggac ccggcgaagc tagccgccta
      481 tgccaagctc gcgccgctcg cgctcgcgcc gttcggcgtg cgctatctgt gccgcggcaa
      541 tccgaacgcg acctacgaat ccggactgaa ggagcgcctc gtcgtctccg agtttccgag
      601 cctcgacaag gcgatcgccg gccacgacag ccccggctac caggaagcgc tgcgcgcgct
      661 cggcgacggc gccgtgcggg acatccgcat cattgagggc ttggagtaaa ggcacctttc
      721 ctgcgtaagc gggaatccat ctgggtcccg ctttcgcggg aacgaacggc ttggatattg
      781 tggccggcta gcctaccagc ttgtcgaatt cttcgatcga gaccgcgggc gcagtggtga
      841 atgcaatgcc ggtcagtttc gcaagcgcgg tggatgcggc tattgcgcgc gaattatccg
      901 gcaggtcggc aatcatcacg agatcgatgc cgccgagcgt cgcataggcc gacttgagct
      961 cgccgccatg ctttttgatc agcgccttcg cctcgtcgga gcgtttggcg ctgatgcctt
     1021 tgagcgcgtc cgccgaatat ctaccgaaca acagatacgt tgccatgacg acatctccgg
     1081 tttcaggagg aacgtggccc gaagattata gtccagcgcg gaacggttcg cacgggcgcg
     1141 cgttccctgc caaccagcag ggagaaaacg ccatgccggc aaaatcgaaa aagcagcaga
     1201 tggcggcagg cgccgccttg gccgcaaaac gcggcgaacg cccggtttcc agtctcaagg
     1261 gcgcctcacg ccagatggct caatcgatga acgaaaagca gctcgaggag ttcgcccaca
     1321 ccagacgcaa gggtctgccg cgaaagaaga cttgatgatc accgcccgcg cgcgagcttc
     1381 actttgacat caggcaccgc ctgcaccgcc gcggagcgat ggtcgagccg cagcgtcagg
     1441 cagcaggcgg aaccgccgct gcgcaaaaac gcggccagcg gcgtcttcac caccttatag
     1501 ccacggtcgt cgagccgccc gcgcagcgct tcgctgcagc tcgaaagcag gatggtccgc
     1561 ccgaagctga ccgcgttggc ggcaaagcgc gcggcatccg ccggcgacag ctcgatgcgc
     1621 tgctcggggg cgacgcgcgc atggatctgt gccagcgcct ccgccgtgaa ggcgcctgga
     1681 tagtacatca cggctccgca gggcagtggg ctgaacgccg tatcgaggtg atagtaggat
     1741 ggatcggcca gcccgagcgc gacgcagggc acgccgaact ccgctgcgac tatctcgcgc
     1801 gcggccgcgt ccgtgcggaa gccggacccc atccagaaca tccgacggtg cggatcccaa
     1861 aggcagtcgc ccgcgccttc gagcgcgacg ccctgcggca gcgtaacaac ttcgtcgatc
     1921 aggccacgca cccgcaaagc atggaatgcc gcggcaaaaa ccggtgcctc gccctgccgc
     1981 tgcg
//
LOCUS       DATDHO010000109         3620 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_252312, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000109 DATDHO010000000
VERSION     DATDHO010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3620)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3620)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3620
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252312"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1400)
                     /locus_tag="VIY07_02010"
     CDS             complement(<1..1400)
                     /locus_tag="VIY07_02010"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6380559.1"
                     /translation="MRALTRIVSLAALAAFVPLSLIAAPTERPREFLWAGDPEGGAPF
                     VEADPAQPDKLVGFDVEIAELIAGGLKRKAAFINVTFTSIDQSIERGDAEIGLSGIED
                     TAARRATMAPTVPYYQFREVLSVRDADASRFRTLADLRGRRVGTLSGTIAYDILLGAE
                     RDFGIQAISYDDDVHPYSDLVIGRLDAVLLDNVLAERRRRALPGFTIQPQSVAVGHYV
                     GVLAARNASLRDTVNEILRGAMRDGTLERIFRKWGVWNDDQPALYARVLAGEPVPAVI
                     GLDSTVGAEMLSGWEAVRRYLPSLVRASLITIVLSCLSMGLAVVLGMAIASGRVYGGR
                     LTRALLTGYVEIMRGTPILLQLFVLYYGIAAAVRLPAFAAALLGLALNYAAYESEIYR
                     GALEAVPTGQLEAARILGLSEPQVLMLVRGPQAFRLALAPMTNDFVALLKDSSLVSVL
                     TVLELTKQTQIFATNIG"
     gene            1744..3030
                     /locus_tag="VIY07_02015"
     CDS             1744..3030
                     /locus_tag="VIY07_02015"
                     /inference="COORDINATES: protein motif:HMM:NF020896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050485 - oxidoreductase activity, acting
                     on X-H and Y-H to form an X-Y bond, with a disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/sarcosine/betaine reductase component B
                     subunit"
                     /protein_id="HEY6380560.1"
                     /translation="MELELFDYALEEIEWGDQTQLNGKSLSICLTDLQAQIQELSHGI
                     HIDYELARPDESKRIVHVLDTVLPIAKFNGLSPTFPGFEGPAQLVGTGQTIRLKNLLV
                     TVAGRFPHPELMTPIERPREGIIDMAGVGASYSYGSDHFHLVLSLTPDPVVSNAAFDI
                     ALRSIALRCARFLAQVEKTDNDPKTRIVALNPVDERLPKVVLIYQVQSQLVCARTFYY
                     GEEMSRTLPTLVHPAEFFDGAVVSGNYKSERKIPTSLHCANPFIEELLQRHGKTVNFL
                     GVILSRGYNDSFEQKKKMGLWVARLAGNLGAEGAVAFMEGTGNGTVDFMQTVKACQDE
                     GIKTVAVLHESNGPKGYERPLVDHPQEADSMISRGNVSEKIYIPPLATVIGNPDIDLH
                     LKATHDARLPFLFDPTIFFGSYSKMGASGFRAAYEN"
     gene            3043..>3620
                     /locus_tag="VIY07_02020"
     CDS             3043..>3620
                     /locus_tag="VIY07_02020"
                     /inference="COORDINATES: protein motif:HMM:NF019003.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/betaine/sarcosine/D-proline family
                     reductase selenoprotein B"
                     /protein_id="HEY6380561.1"
                     /translation="MKVLHYLNQFFAGLGGEEKAGQEVLFIPRAVGSGAVIENAVKDR
                     GVEYASIACGDNYFHEQEEKALNAIRAALEQFQPDLFLAGPAFNAGRYGLACAKVCSW
                     VRDNWRIPVITAMHDDNPGTKEIGRYVFVIQTGNSAASMQESLRRFSLLIERLLAGNE
                     TAIENFRAEYCLPIPRRFTVRSGAPDYARAVDL"
BASE COUNT          806 a         1069 c         1035 g          710 t
ORIGIN      
        1 ccgatattgg tggcaaaaat ctgcgtttgt ttcgtcagct cgaggacggt cagcaccgag
       61 actaacgatg agtctttgag gagcgcgaca aagtcgttcg tcatcggcgc cagcgccagg
      121 cgaaacgctt gcgggccacg cacgagcatc aagacctggg gctcgctcag acccaggatc
      181 cgggccgcct cgagctggcc ggtgggcaca gcttccagcg cgcctcgata aatctcgctt
      241 tcgtaggccg cgtagttgag cgccagtcca agtaacgccg ccgcgaaagc tggcaggcgg
      301 acggcggcgg cgatcccgta atagagaacg aaaagctgga gcagaatcgg cgtcccgcgc
      361 ataatctcga cgtatccggt cagaagagcg cgtgtgaggc gaccgccgta cacgcgtccg
      421 ctggcgatcg ccatgccgag caccacggca agtcccatag aaaggcacga cagcacgatg
      481 gtaatcagcg acgcgcgcac cagcgacggc agatagcgtc gcaccgcttc ccaccccgaa
      541 agcatctccg cgccgaccgt gctatcgaga ccgatgaccg ccggtaccgg ctctccggcg
      601 agaaccctcg cgtagagcgc cggttgatcg tcgttccaaa cgccccactt gcggaagatt
      661 cgctcgaggg taccgtctcg cattgcccca cggagaattt cattgaccgt gtcacgaagc
      721 gatgcattcc gagccgccag cacgccgacg tagtggccca cggcgacgct ctgcggctgg
      781 atcgtgaaac ccggaagcgc gcgccggcga cgctcggcga ggacgttatc gagcagcacc
      841 gcatccagac ggccgatcac gagatcgctg tagggatgca cgtcgtcgtc gtaagagatc
      901 gcctgaattc cgaagtcgcg ttcggcaccg agcaggatgt cgtatgcgat cgtcccactc
      961 agggtgccga cccgccggcc gcgaagatcg gcaagggtgc gaaagcgcga cgcgtcagcg
     1021 tctcgcacgc tcaacacttc gcgaaactgg tagtagggaa cggtcggcgc catggtagcg
     1081 cgccgcgcgg cagtgtcttc gatcccgctc agtccgatct cggcgtcgcc gcgctcgatc
     1141 gattgatcga tggaggtaaa tgtaacattg ataaaggcgg ctttgcgctt caggccgccc
     1201 gcgataagtt cggcgatctc gacgtcgaag ccgacgagct tgtccggctg ggcagggtcc
     1261 gcttcgacaa agggcgcgcc gccctcaggg tcccccgccc agaggaattc gcgcggccgc
     1321 tcggtaggcg cggcgatgag agacagcggc acaaaggccg cgagggcggc caatgacaca
     1381 attcgggtaa gtgctcgcac gcggttctgc tgaaaatcaa cggggggatt atcggatagt
     1441 agaaatttgc ttttgtgact cagcgatcgg caacccaaaa ctatcctcga caaccgttct
     1501 ccaacaactt tcgagaatct caaggtccag tagaagaatc cgactgacct cagcctcaat
     1561 ttcgaccgga gactatccga tagccagcta ccatgtcaat ctgcgtggct aaacatttct
     1621 gcttctcggg accgtcctgt gcgataagaa ccccaggtct cacggtctgt ctctccttga
     1681 cactccaagc agcgacgcgg tacatgggaa acggttcttt tgttgatttc agaggactat
     1741 ccggtggaac tggaactttt cgactacgct cttgaagaaa tcgaatgggg tgaccagaca
     1801 cagctcaacg gtaagtccct ttcgatctgc ctgaccgatc tccaggcaca aatccaagag
     1861 ctatcccatg gcattcatat tgattacgaa ctggcgcggc cggacgaatc caaacgcatc
     1921 gttcacgtct tggacaccgt gctcccgatc gcaaaattca acggtttaag tcccactttc
     1981 ccgggtttcg agggtccggc gcagctcgtc ggcaccgggc aaacaatacg tctcaagaat
     2041 cttctcgtga ccgtagccgg acgctttccc catcccgaac ttatgactcc cattgagaga
     2101 ccgcgcgaag ggatcatcga catggccggg gtcggcgctt cttactccta tggatcggat
     2161 cactttcacc ttgttctatc actgaccccc gatcccgtcg tttccaacgc ggccttcgat
     2221 atcgcgcttc ggagtatcgc gcttcgatgc gcgcgttttc tggcgcaggt cgaaaaaaca
     2281 gacaacgacc ccaaaacaag gatcgtcgct ttgaatccgg tcgacgagcg tctgcctaag
     2341 gtcgtactta tctaccaggt acagagtcaa ctggtttgcg cgcgaacttt ttactacggc
     2401 gaagaaatgt cgaggacgct gccgactctt gtccatccgg cagaattctt tgatggcgcg
     2461 gtggtcagcg ggaattacaa aagcgagcgg aagatcccga cgtccctcca ctgcgccaac
     2521 ccgttcatcg aggagttgct tcaacgacac ggcaaaaccg tgaactttct cggcgtcatt
     2581 ctttcgcgcg gctacaatga cagtttcgaa cagaagaaaa aaatggggct atgggtagcg
     2641 cgcctggcgg ggaatctggg cgccgaagga gccgtcgcat tcatggaggg aacgggaaac
     2701 ggaaccgtcg atttcatgca gaccgtgaag gcttgccaag acgaaggcat caagaccgtt
     2761 gccgtgctcc acgagtccaa tggtcccaag ggttatgagc ggccactcgt ggaccatccg
     2821 caagaggccg atagcatgat cagccggggc aacgtttcag agaaaatcta tattcctccg
     2881 ctcgcaaccg tgatcgggaa tccggatatc gatcttcacc tcaaggcgac ccacgatgca
     2941 cgccttccct ttctgttcga cccaacgata tttttcggct cctacagcaa aatgggcgcc
     3001 agcgggtttc gggcagctta tgaaaattaa ggagactcgg gcatgaaagt tctccactat
     3061 ttgaaccagt tcttcgccgg cctcggcggt gaagaaaaag ccgggcagga ggttctcttc
     3121 ataccccgtg ccgtagggtc aggcgcggta attgagaacg cagtgaagga tcgcggcgtt
     3181 gagtacgcga gcatcgcgtg cggcgataac tattttcacg aacaagagga aaaagctctg
     3241 aacgcgattc gagccgcgct tgagcaattt caaccggact tatttcttgc cggcccggcc
     3301 ttcaatgccg ggcgatacgg tctcgcctgt gcgaaggtct gcagttgggt gcgagacaac
     3361 tggcgcatac ctgtaatcac cgcgatgcac gacgacaatc ccgggacaaa agaaatcggc
     3421 cggtatgtct tcgtcattca aaccggcaac tcggcggcat cgatgcagga aagcttgcga
     3481 cgtttttcgc tgctgatcga gcggttgctg gccggaaacg aaactgccat cgaaaatttc
     3541 cgcgctgagt attgcttgcc gatcccacgg cgctttaccg tgcgctcagg cgctcctgat
     3601 tacgcccgag ccgtggatct
//
LOCUS       DATDHO010000110         2295 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_252355, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000110 DATDHO010000000
VERSION     DATDHO010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252355"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            251..718
                     /locus_tag="VIY07_02025"
     CDS             251..718
                     /locus_tag="VIY07_02025"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEY6380562.1"
                     /translation="MTKGTNLNRQAESQELARAAIEQTLQKLWTAFREHDARALSGIY
                     VEDADWTNAFGTTRHGRDEIISYLRGLFADAHFAAARPVGAPELAVRFVTDDVALANT
                     YVEIQGQQTVAGGVLPMRRNHSLKVLCRQSDGRWLIVSEIFMDARDDSTYVES"
     gene            850..1317
                     /locus_tag="VIY07_02030"
     CDS             850..1317
                     /locus_tag="VIY07_02030"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF023395.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEY6380563.1"
                     /translation="METMKDEPATCVFCRILRGELTPEVLAYRDSQTAVFPSLHQQSR
                     NRGHMLVVPIRHVAQIYDVGRDLAGPLMTTLARVAGALKAVCSADGVSIRQNNEPCGG
                     QDVFHVHFHVIPRFAGDAFNTGNDRFPFGAVKISLEERVEQARRLAEALRQAE"
     gene            1432..2082
                     /locus_tag="VIY07_02035"
     CDS             1432..2082
                     /locus_tag="VIY07_02035"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014068.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEY6380564.1"
                     /translation="MKVLALVYPGMTLLDLVGPLQAWSFLPGYEVQYAWHCSGPVPTD
                     CGLSVQATNSFEDAWTDPDVLVVGGGAKPTLDLLGDSAAIAFLADRGSRARWVCSVCT
                     GSLLLGAAGLLRGYRAAVHWGAREALTQFGAEPSSERVCVDRNRLTGGGITAGVDFGI
                     TVAGHWAGESVGRVIELIMEYAPQPPYGTGRPDLADAQTLAAARTAMQQAMTGVSE"
BASE COUNT          481 a          638 c          701 g          475 t
ORIGIN      
        1 agtcagacat ctgacgtcaa tcctgacccg gaggccagcg ccgctttgct cttacttgac
       61 tacatggatt tgagcggcct aacatttcgg tgaacgcggg cgtccgcgag tgtgccttcg
      121 ttcagcatta tgccaatcaa cgaccgcaac gccgtagcgg gcacctctcc ctcgcggccg
      181 cctgttacct taacgttagt tacccaatca ggtggccggc tcgacaacaa cttgtcaaag
      241 gagaacaaaa atgaccaaag gaacaaattt gaatcggcaa gctgaatcgc aagagttggc
      301 cagagccgct atcgagcaga cgctgcagaa attatggaca gcgtttcgtg agcacgacgc
      361 aagagctttg agcggcatct acgtcgagga tgctgattgg acaaatgcct ttggcacaac
      421 ccgacacgga cgtgacgaga ttatctccta tctcaggggt ctgttcgccg atgcgcattt
      481 tgctgccgcc aggccagtcg gcgcaccgga actggcggtc cgcttcgtta ctgacgacgt
      541 agcccttgcc aacacgtacg tggaaattca agggcaacaa acggtcgcag gtggcgtact
      601 cccaatgcga cggaatcact cgctcaaagt attgtgccga caatcggatg gacgatggct
      661 catcgtttca gaaatcttca tggatgctcg tgatgacagt acctatgtcg agagctagca
      721 gtccgcgaaa acaaggccac cggatcggaa cctaccattg ggttgagaag gacgatacga
      781 agcgcgcctc ttacccaaaa cgttagccag acacatgacg cggttgtacg agaccaacat
      841 caggtcgaaa tggagacgat gaaggacgaa ccagcaacgt gtgtgttctg tcgcattctg
      901 cgcggtgaac tgacgcctga agtcctcgca tatcgcgaca gccagaccgc ggtattcccg
      961 agcctccatc agcagtcgcg taaccgagga catatgctcg tcgtgccgat tcggcacgtc
     1021 gcccagatct acgacgttgg cagggatctg gcgggtcctt tgatgacgac cctcgcgcgt
     1081 gttgcgggag cactaaaggc ggtgtgttct gcggacggcg tgtcgattcg tcagaacaac
     1141 gagccatgcg gtgggcaaga cgtgtttcat gttcattttc acgtgatccc gcgctttgcg
     1201 ggagacgcat ttaacactgg taacgaccgg ttcccgtttg gtgccgtgaa gatttcgctg
     1261 gaggaacgcg tcgagcaggc acgacggttg gccgaagcgc tacgtcaggc cgagtagacg
     1321 cgcgggcgag gctggctaac acgcgcttgc agatcgaccg cgcttcgcag ctatccctgc
     1381 tccggcgcgg cgtctgaagc gcagaatcgt tcacccaaag gagggcacac tatgaaagtg
     1441 ttggcgctgg tatatcccgg catgaccctg ttggacttgg tcggtccctt gcaggcgtgg
     1501 agtttcttgc ccggctacga agttcagtat gcctggcatt gttccggtcc ggtgcccacg
     1561 gactgcggcc tcagcgtgca ggcgaccaac agtttcgagg atgcttggac tgatccagac
     1621 gtcctcgttg tcggcggcgg tgcgaagccc acattggacc tgctgggtga ttccgcggca
     1681 atcgcgtttc tagctgatcg cgggtcgcgc gctcgctggg tgtgtagtgt gtgcacgggc
     1741 tccttgttac ttggggctgc tggactattg cgaggctacc gtgctgcggt gcactggggc
     1801 gcgcgagaag ccttgaccca attcggcgct gagcccagca gcgagcgcgt ctgcgtcgac
     1861 cgcaatcggc tcaccggcgg tggcatcaca gcgggtgtcg atttcggtat caccgtggcg
     1921 gggcactggg ctggcgagag cgtgggacgg gtcatcgaac tgatcatgga gtacgcgcca
     1981 cagccgccgt atgggacagg ccgccctgac ctcgcagatg cacagaccct cgcagctgcg
     2041 cgaacggcga tgcaacaagc gatgacgggt gtatccgaat agagcacaaa attggtgtaa
     2101 ctcaaatccg cgattgcagt gggcgcatcg ccgttgttta tgtacacacg attcgagaaa
     2161 tgcgcctaac cacgccttca accggacccg ccagtatgct acctcttttt tgacatgcgg
     2221 tggttgcggc gggccggtta acttggtctc gttaggcggc aggtgttggc agcgcgattg
     2281 gtgagcaaac gacga
//
LOCUS       DATDHO010000111         6884 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_53722, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000111 DATDHO010000000
VERSION     DATDHO010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6884
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_53722"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VIY07_02040"
     CDS             complement(<1..357)
                     /locus_tag="VIY07_02040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380565.1"
                     /translation="MRRREVIKVIAGSAVWSLAANAQPSNKPVIGFLSARSAKESAHL
                     VDAFRKGLAESGIVEGQNVTIDYRWADSHYERLPKQAADLLARQPTVLVSVGGDMTAK
                     VASTATTTTPIVAVFIG"
     gene            complement(464..571)
                     /locus_tag="VIY07_02045"
                     /pseudo
     CDS             complement(464..571)
                     /locus_tag="VIY07_02045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453328.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            complement(635..916)
                     /locus_tag="VIY07_02050"
     CDS             complement(635..916)
                     /locus_tag="VIY07_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007566100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380566.1"
                     /translation="MNKDSRTRRAWWRLLAGLLFALPVHTTAAAEDAPPISTMLKEGW
                     QIAGYSQAFDNRSTFILFRHPDHAYLVQCRVGYDVTRRPPTYSICYRLE"
     gene            1110..1961
                     /locus_tag="VIY07_02055"
     CDS             1110..1961
                     /locus_tag="VIY07_02055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY6380567.1"
                     /translation="MQPPKAFVLEAHGARMPTIGFGTMELPHQPAELVAAAIDAGYRH
                     IDTARKYGTEEHVGEGIRASGITRSELFVTTKVTEENAREADFLHSAETSLKALGLDY
                     VDLLLVHWPQPKVPFSETLGALAKAKRSGMTRHIGVSNFTLAMLDEAVRVCPEPLVTN
                     QIEYHAYLPQDRMIAALKKYGMTLTAYCPVARGKLLDDPVVGEIAKARRKTHAQICLR
                     WLVQQPIVAAVPRALEQQHIVENLDVFDFSLSDEEMRRISALRKKNIRIADPPERAPT
                     WDIETVA"
     gene            2406..3848
                     /locus_tag="VIY07_02060"
     CDS             2406..3848
                     /locus_tag="VIY07_02060"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY6380568.1"
                     /translation="MSRSSFSRRTFLQGSVGLTVANFVPGTTPFALAATMEEQTIAAA
                     KAVGKADVNGMIWSPYLVPMKPVIAEFTKETGIGIGAVQDISIFDAPQRAMAEALSRS
                     PQFDFIHIDSNMIPSLASAGYLEPLDEYIKKAGFQLDAVADYGKFMKYGGQTFGVPTD
                     GNVHIQYTRKDLIDNPDNKKRFADKFGVELKVPETWEDNLRLQEFLMDPSKDLYGSGN
                     LRNRANGPTWWYMIFYSAGGFPFDDDMKPTLDTPAGQYAVDLYLQDKKVNHPEAANWG
                     TPQMIPRIAQGHVVSCQYWDGTCKTIANPKQSKTVDQFYFSLVPGSKLTGKMVHRSIS
                     SPLAAILINKYSPRKAQAAYLALWLGSGKNSIPIVSDPVNAFNDAWAKEHMKAEPVLK
                     AYTPEGIKAVETNFQVVAPPIYLTGYLEFQDALGKNLSEAYVGQLPAKDVLKKTENEW
                     NAVIGRIGRSKLKNDLASYKAVMPTKAVPT"
     gene            3921..4907
                     /locus_tag="VIY07_02065"
     CDS             3921..4907
                     /locus_tag="VIY07_02065"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEY6380569.1"
                     /translation="MAVDALAAGKAQFSSEARIRSRRLAVRQFKLSLLLPLIALFAFL
                     LTPVLLLQLYFSFHQWTVYLGSWSEAEFVGLDLFREVLTDPRFGWAIVRSLAFAISST
                     LGCFVFGFLLAYLMYKPFRGQAFFYIIFILPMLTVPVVVAYTAEMMLYQSGPINDLIS
                     KIIGVDFKPAWLSNPDIALATVALLEIWNWTPFSFIILLAGLSAIPKEPIEAAEILGA
                     SKWRIFWEVQLPLLRPVILLALVLRFLEAMAEFPKTWALFQGGPGSATETLPIYIFMT
                     TWQYFQISKGAAMSYIVMLLMIVIVLIAIHLLRREKQSLDQMYEMRSKDAEA"
     gene            4911..5789
                     /locus_tag="VIY07_02070"
     CDS             4911..5789
                     /locus_tag="VIY07_02070"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEY6380570.1"
                     /translation="MVTKSRRRLVSAIVRYTILTVWGIIAFFPIYWMVSTSFKPDIQW
                     FAWPPVYFPDPPTLANYMNVWLGAEQYAQTQYAISSQTPLVSLWNSTVIAFSSTFLSV
                     AFGSVLAYGVSRYRILSEVRMFQLLMLRMIPPIVVVAPLSLYYSALSLLDTRIGVIMV
                     YFLTTLPYAVWMTKSFIDEVPREVEQAAEILGASRWRTVLEIVLPLIRSGLVATFLFI
                     LILTWSEYLLALIITKTQVSTLPIELSKYQGSTEGRVYGRQAALAVGITIPLMIVGLI
                     IRKHLARGFSFGMVRR"
     gene            5792..6877
                     /locus_tag="VIY07_02075"
     CDS             5792..6877
                     /locus_tag="VIY07_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380571.1"
                     /translation="MARIELINLNKSFGAVHAVKNVSFTIEDGEFVVFVGPSGCGKTT
                     TLRMIAGFEDPTSGEIRIDGRVVNDLEPRDRNLGMVFQSHALFPHKNVAQNIEFGLRM
                     KKVAPEERVKRVREVADMVRIGHLLDKMPAQCSGGESQRVALARTLVTNPSTFLLDEP
                     LSSLDAKLRRELRAECDRLHQVLKRTFIFVTHDQEEAMTLADRIVVMRDGEIVQVGSP
                     MEIYSNPVNYFIADFFGSPSMNLVPGEVVRSNGVARFQSTLFDIQLPERFSSADAGKG
                     TLGIRPEHVGINVGGKTGTPLPVRLVEPLGKDTLLYFDAGTERAFVAVSEGLDMADTK
                     IGERLTLSLDEGRMHLFDEQGHSIRGT"
BASE COUNT         1399 a         2084 c         1977 g         1424 t
ORIGIN      
        1 gccaatgaac accgcaacga ttggagttgt ggtagtagcc gtggacgcga ccttcgcagt
       61 catatctccg ccgaccgaca ccagcactgt gggctgtcga gccaaaagat cggcagcctg
      121 tttaggtagg cgctcgtaat gactgtctgc ccagcggtag tcgatggtga cattctgccc
      181 ctcgactatg ccggattcgg ccaaaccttt gcgaaaggcg tccaccaaat gtgcgctttc
      241 cttggccgac cgcgcactaa gaaatccaat aactggcttg ttcgaaggtt gcgcgttcgc
      301 agcaagcgac caaaccgctg aaccggcgat gactttgatg acctcgcgcc gcctcattgc
      361 cgccttccga ggctcccgac aaattatctt ataggttcaa gcaacaagat tggaagcagc
      421 agaccatgtc tgctttggga ggccaatagc ggacatcaaa ccgctattcg atcacgtcat
      481 cggcgcgagc gagcaaagat gggggcactg ataggcccag cgccttcgct gtcttcaggt
      541 ttatcgcgag ttcgcatttg cttggggctt gtccacctaa aggggtggcg atgtccgctg
      601 tttgccgagg tggggtgaca ctgaaactgc tgactcactc gagcctgtag cagatcgagt
      661 aggtaggtgg cctgcgcgtc acgtcatagc cgacccgaca ctgaaccaaa taggcgtggt
      721 cggggtggcg gaagaggatg aaggtggaac gattgtcgaa ggcttggcta taaccggcaa
      781 tttgccatcc ttccttcagc atggtgctga tcggaggcgc gtcttcggcc gcggccgtgg
      841 tgtgaaccgg caatgcgaat agaagcccgg caaggagacg ccaccatgcg cggcgtgttc
      901 ggctgtcttt attcatggcg gcaattatac cgcggaagct ggcgctccgc ttgagattgt
      961 cgaggtacct ctgctgcgcc gatcagcgtg atgactcgcg ccgccttgcc cgcggggcta
     1021 gcctccggcg agcactgaag cgttcacccg tttacgatct caacccagtt gcactaggat
     1081 ttgtgccgct ccttgccgtg gagtttacga tgcagccgcc gaaagctttt gtactcgaag
     1141 cgcatggcgc aagaatgccg acgatcggct tcggcaccat ggaactgccc catcagccgg
     1201 ccgaactcgt cgcagcagcg atcgacgccg gctatcgaca cattgacacc gcgcgtaaat
     1261 acggcaccga ggagcatgtc ggtgaaggca tccgcgcgag cggcatcact cgcagcgagc
     1321 tgttcgtcac gacgaaggtc accgaagaga atgcgcgaga ggctgatttt ctgcactcgg
     1381 cggagaccag tctgaaagcg cttggcctgg actacgtgga cctgctgctg gtgcattggc
     1441 cgcagccgaa ggtgccgttc agcgaaacgc ttggggccct cgccaaagcc aagcgcagcg
     1501 gcatgacgcg gcacatcggc gtatcaaatt tcacgctggc gatgctcgat gaagcggtga
     1561 gggtctgccc cgagcccctc gtcaccaacc agatcgagta tcacgcctac ctgccacagg
     1621 atcgcatgat cgccgcgctc aaaaaatacg gcatgaccct gacagcctat tgtccggtgg
     1681 cacgaggcaa gctactcgac gacccggtgg tcggcgagat cgcgaaggca cgcagaaaga
     1741 cacacgcgca gatctgcctt cgctggctcg ttcagcagcc aatcgtcgcc gcagtgcccc
     1801 gcgccctcga gcaacagcac atcgtcgaaa acctcgatgt gttcgacttc tcgctcagcg
     1861 acgaagagat gcggaggatt tccgcgctgc gaaaaaagaa catccgcatt gccgacccgc
     1921 ctgagcgagc gccgacgtgg gatatagaga ccgttgcctg acattgatgc caccgccagc
     1981 tcagcccggc tgctttcaag gtggcagctc cattcatccc acgaagcacc cgcgaccttg
     2041 aaccatgttg cggattgaaa gccatcaaca tacgatgtgt caaaatttga acgcggcatc
     2101 aacgcggacg tctagggagc taaacgcgct gtattgtacc gggtcgtctg acgcgccatg
     2161 tccgtaaaca ggctgggcgc gcggaggcca gagttacggg aggtcttttg agcttttcct
     2221 ctcgcgaacg gccggttgaa agtttgcgtg ttccctgccc cacgcaggca acagaaactt
     2281 ttccattgtc cattcccggc atgcgctgcg tcgcagcgcg gctccatttc tcatgcggcg
     2341 agcgacgctt cgccgggtca ccctactagt aaacgcacaa agccaacaca ggcgaggagg
     2401 aagtcatgtc caggtcgagt ttttcgcgac gtacgttcct gcaaggcagt gtcggactga
     2461 ctgtggcgaa tttcgttccg ggaacgacgc cctttgctct tgccgcgacg atggaggagc
     2521 agaccatcgc ggctgcgaaa gcagtcggaa aggcggacgt caatggaatg atctggtcgc
     2581 catacctggt gccgatgaag cccgtcattg ccgagtttac caaggaaacc ggaatcggta
     2641 tcggcgcggt acaggatatc tcgatcttcg acgctccgca gcgtgcgatg gctgaggcgt
     2701 tgtcccgttc gccgcagttc gatttcatcc atatcgactc caacatgatc ccgtccctcg
     2761 cgtcggccgg gtatctcgaa ccgctggatg aatacatcaa gaaggccggc tttcaactcg
     2821 atgccgtcgc tgactacggt aagttcatga agtacggagg ccagaccttt ggcgttccga
     2881 ccgacggaaa cgtgcacatt cagtacacgc gcaaggatct aatcgacaat cccgacaaca
     2941 agaagcgctt cgccgacaag ttcggcgtcg agttgaaagt gccggagacg tgggaagata
     3001 acctgcgcct gcaggaattc ctcatggatc cgtcaaaaga cctctacggg tccggcaact
     3061 tgcgcaaccg cgcgaacggc ccgacctggt ggtacatgat cttttatagc gccggcggct
     3121 ttccctttga cgacgacatg aagccgacgc tcgacacgcc ggccggccag tacgccgtcg
     3181 acctctatct ccaggacaag aaggtgaatc atccggaggc ggcgaactgg ggcacgccgc
     3241 agatgattcc gcgcatcgcg cagggacacg tggtgagctg ccagtattgg gatggaacgt
     3301 gcaagaccat tgccaacccg aagcaatcga aaaccgtgga tcagttctat ttcagccttg
     3361 tgccgggctc caagttgacg ggcaagatgg tccaccggtc gatttcgtcg ccgctcgctg
     3421 cgatcctgat caacaagtac tcgccgagga aagcgcaagc cgcttacttg gcgctgtggc
     3481 ttggctccgg caagaacagc atcccgatcg tctccgatcc ggtcaacgca ttcaatgacg
     3541 cctgggccaa ggaacacatg aaggcggagc cggttctgaa agcctatacg ccagaaggca
     3601 tcaaagctgt cgaaactaat ttccaggtcg ttgcaccgcc gatctacctg acaggctacc
     3661 tcgagtttca ggatgctctc ggcaagaatc tctccgaggc ctatgtcggc cagctcccgg
     3721 cgaaggacgt tctgaagaag acggagaacg agtggaacgc cgtcatcgga cgtatcggcc
     3781 gcagcaagct caagaatgat ctcgcgagct acaaggcggt catgccgacc aaggcggttc
     3841 cgacctgatc tgacgcgccg atttggcccg gacgagccgt ctagctcgtc cgggcttttt
     3901 gatccgcaaa gaaccaggac atggccgtcg acgccctcgc agccggcaaa gcgcagttct
     3961 ccagcgaagc tcgcattcga tcgcgacggc tcgcagtgcg ccaattcaag ctgtcgctgc
     4021 tgctgccact gatcgcactc ttcgcgttcc tgctgacgcc agtcctgctg ctgcagctct
     4081 acttctcctt ccaccagtgg acggtatacc tcggttcgtg gtcggaagcg gagtttgtcg
     4141 gccttgattt gttccgggaa gtgctcaccg acccccgctt cggctgggcc atcgtgcgct
     4201 cgctcgcgtt cgcaatcagt tccacactgg gctgcttcgt gttcggcttc ctgctcgctt
     4261 acctgatgta taagccgttt cgcggccagg ccttcttcta catcatattc atattgccga
     4321 tgctcaccgt gccggtggtc gtcgcctaca cggccgagat gatgttgtac cagagcggcc
     4381 ccattaacga tctcatctcg aagatcatcg gagtcgattt caagccggcc tggctcagca
     4441 atccggacat cgcgctggcc actgtcgcac tgctcgaaat ctggaactgg acgccattct
     4501 ctttcatcat tttgcttgcg gggctctccg ccatcccgaa ggagccgatc gaggccgccg
     4561 agatcctcgg cgcatcgaaa tggcgcatct tctgggaggt gcagctgccg ctgctgcgcc
     4621 ccgtcattct tctcgcgctg gtgcttcggt ttctcgaggc gatggcggaa tttcccaaaa
     4681 cctgggcgct gtttcagggt ggcccggggt cggcaacgga aacgctgcca atctacatct
     4741 tcatgacgac ctggcagtac ttccagatct cgaagggcgc ggcgatgtcc tacatcgtga
     4801 tgctcctgat gatcgtcatc gtcctgattg cgatccatct actgcggcgc gagaagcagt
     4861 cgctcgatca gatgtatgaa atgcgttcaa aggacgcgga ggcctgaacg atggtcacca
     4921 aatcgcgccg ccgcctcgtc tctgcaatcg tgcgttacac gatcctgacc gtctggggca
     4981 ttatcgcctt tttcccgatc tactggatgg tctcaacgtc attcaagccg gacatccagt
     5041 ggttcgcgtg gccacccgtc tattttccgg acccaccgac gctggccaac tacatgaatg
     5101 tctggctggg tgccgagcaa tatgcccaga cccaatatgc aatctcctcc cagacgccgt
     5161 tggtttcgct ctggaactca acggtaatcg cgttcagttc gactttcctt tcggtcgctt
     5221 tcggctctgt tcttgcctac ggcgtctcgc gctatcgcat cttgtcggaa gtgcgcatgt
     5281 ttcagcttct gatgctgcgc atgatcccgc cgatcgtcgt cgtcgcacca ctgtcacttt
     5341 attactcggc gctcagcctg ctcgacaccc gcatcggggt catcatggtc tacttcctga
     5401 ccacgctgcc ttacgcggtt tggatgacaa agagcttcat cgacgaggtg ccgcgcgagg
     5461 tggagcaggc agccgagata ctcggcgcct cgcgctggcg caccgtgtta gagatcgtcc
     5521 ttcccttgat ccgctcgggc ctggtggcaa ctttcctctt tatcctcatc ctgacctgga
     5581 gcgaatacct cctcgcgctg atcatcacca aaacccaggt ctcgacgctg ccgatcgagc
     5641 tgtcgaaata tcagggctcg accgaagggc gcgtttatgg ccggcaggcg gcgctcgccg
     5701 tcggcatcac tattccgctg atgattgtcg gcctcattat ccgtaagcac cttgcccgcg
     5761 ggttcagctt cggaatggta cggagataat cgtggcgcgt atcgagctca tcaacctcaa
     5821 caagtcattc ggcgccgttc acgcggtcaa gaacgtaagc ttcacgatcg aagacggcga
     5881 gttcgtcgtg ttcgtcggac catccggctg cggcaagacg accacgttgc gaatgatcgc
     5941 cggtttcgag gacccgacct cgggggagat ccgcatcgac ggacgcgtgg tgaacgatct
     6001 cgagccgcgc gaccgcaatc tcggcatggt ctttcaaagc cacgcattgt ttccccacaa
     6061 aaatgtcgcg cagaacatcg agttcggctt gcgcatgaag aaggtcgcgc cggaggagcg
     6121 cgtcaagcgc gtacgcgagg tcgccgacat ggtccgtatc ggccatctgc tggacaagat
     6181 gccggcacaa tgctcgggcg gggagtcgca gcgcgtcgcg ctggcgagaa ccttggtgac
     6241 aaatccgtcc accttcctgc tcgatgaacc actgtcgagt ctcgatgcga aacttcgccg
     6301 cgagctgcgc gccgaatgcg acaggctgca ccaagtgctc aagcggacct tcatattcgt
     6361 tacacacgat caggaagagg caatgacgct tgccgaccgc atcgtcgtca tgcgtgacgg
     6421 cgagatcgtg caggtcggct cgccgatgga aatctactcg aacccggtga actacttcat
     6481 tgccgatttt ttcggttcgc cctcgatgaa tctcgtgccc ggcgaagtcg tgcgcagtaa
     6541 tggggtcgca cgcttccaat cgacactctt cgacattcag cttccggagc gtttcagctc
     6601 cgccgacgcc ggcaagggaa cactgggcat ccggcctgaa catgtcggca tcaatgtcgg
     6661 cggcaagacc ggcacccccc tgcccgtgcg gctcgtcgag ccgctcggta aagacaccct
     6721 gctctatttt gacgcgggca cggagcgcgc gttcgttgcg gtcagtgaag gcctggacat
     6781 ggccgacacc aagatcggtg agcggctcac gctctcgctc gacgagggcc gcatgcacct
     6841 gtttgacgag caaggacaca gcatcagagg tacgtgagga tcca
//
LOCUS       DATDHO010000112         3594 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_202907, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000112 DATDHO010000000
VERSION     DATDHO010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3594
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_202907"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(741..1067)
                     /locus_tag="VIY07_02080"
     CDS             complement(741..1067)
                     /locus_tag="VIY07_02080"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEY6380572.1"
                     /translation="MKLVVTLIVLVLATVEARASCATMQKLAQEHSNDMARRGSMDHA
                     GFMDRARRGARAENVAEGVKTRSEAIALWWSSPGHAANMRLPGCKAVAHAVGRGVYYW
                     TMVIGR"
     gene            complement(1220..1375)
                     /locus_tag="VIY07_02085"
     CDS             complement(1220..1375)
                     /locus_tag="VIY07_02085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380573.1"
                     /translation="MSDYMKAIDFIALAALVVIAAASLYRGGTVWLLIAAIVVAIWGA
                     SRLFGLF"
     gene            1640..2233
                     /locus_tag="VIY07_02090"
     CDS             1640..2233
                     /locus_tag="VIY07_02090"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6380574.1"
                     /translation="MIRHVAIVAAIAALLGPVSLAQAQSDNEREEMLRGGAPKKGIYN
                     IFGLDGTGLGRTSVRYDSKYAPGTIVINTKERWLYLIQGGGSALRYGIGVGRIGFQWK
                     GTHKITAKKEFPNWTAPPEMIARQRDVPRHMKGGDPDNPLGNRAMYLGSTLYRIHGSN
                     DPDSVGEAESSGCFRMRNEDIADLYNRVLVGTTVVVH"
     gene            complement(2276..2476)
                     /locus_tag="VIY07_02095"
     CDS             complement(2276..2476)
                     /locus_tag="VIY07_02095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380575.1"
                     /translation="MNCSINSTATPRPALLLGYWLFGELPDTLVYVGASIVTGAGLFV
                     IRRERQLGLQRAREVEGPPQPA"
     gene            2756..>3594
                     /locus_tag="VIY07_02100"
     CDS             2756..>3594
                     /locus_tag="VIY07_02100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6380576.1"
                     /translation="MSRYTRRDLMIGGAAAGAVATLGLEPARAQAWPNRPVTVICPWA
                     AGGGTDATARIVAAVLEKELKQPVNVVNRTGGSGVVGHSAIATAAPDGYTLGIITVEI
                     SMMHWQGLTELKPDSYTPLALMNEDPPGIQVYVGSPYKTVKELADAIKAAPPGKLKAS
                     GTGQGGIWHLALVGWLQAMGLKADHVAWVPSNGAAPAMQDLAAGGLDIVTCSVPEARA
                     LIEAGKARSLAVMSAERNPAFKDVPTLKEAMGIDYTTGAWRGFAAPKGLPADITNAMT
                     AAL"
BASE COUNT          793 a         1070 c         1053 g          678 t
ORIGIN      
        1 cattacactg gtggacagtc cgaaagcgct tgaccccaaa cggccgatta gagaagcaga
       61 catcatgttc gggacattac agccaaactg ctctgcccta ggggctgagt acgagtgccg
      121 acatcgggtg gcgaggcctc actcagttca gagaccggca gcctatcaaa caaaactctc
      181 gttcaaaatc acaactacgg cttgccggca gtctgttgac gctagtcgac acacaactac
      241 tcccgcaaag ttgtaggcat acgttaaaca aattatcgca acggacaacg caattggctc
      301 ctagttgggc aatcttattt tttggaatgg gtgtgaagtc gccggccaaa ccagtcgtaa
      361 ccgaggtgaa gagaattatt gctacgatac ctagtctcat gtgatgtcct cccaaaaatg
      421 aggactaagc ccctgcatca tttcgcgatg gtcggcaggg cccgcgattg atggtggctt
      481 gtgcaagcgg gcgcctggtg gcggcctatg cttgggatga tagggcagga gcggcggcag
      541 tggcattggc ctttggggca ctaccaccgt ggaaagcgac gtcagcttta atgtccgctt
      601 tgggccataa gcagacattt cgcactgcgt cggcatgtcc gctttaggcc cgaaagcgac
      661 atcagacgcg ttttttcgat tgtccgccat gggccaaaag cgggcgcagc gcgggaccga
      721 cgaaccgatc agcacggtcg ttatcgcccg atcaccatcg tccaataata aacgccgcgc
      781 ccgaccgcgt gcgccacggc tttgcatccc ggcagacgca tgttggccgc gtggccgggc
      841 gatgaccacc acaaagcgat cgcctcgctt cgcgttttta cgccttcggc gacgttctcg
      901 gcacgagcgc ctcggcgcgc gcgatccata aagcccgcat gatccattga accgcgccgc
      961 gccatgtcgt tggaatgttc ctgcgccaac ttctgcatcg tggcgcagct tgcccgcgcc
     1021 tcgacagttg cgagcaccag cacaatcaag gttacaacga gcttcatatg accctctcga
     1081 agccggaggc ggcgaatgct cgccgatctc cgagaaatct atcggctcaa gttatacaaa
     1141 gggtgggttc gaacgacgaa tgtccgctaa gggcattagc ggaaatttta cgatgcgact
     1201 gcaatgtccg ctaaatccgt cagaagagac caaacaaccg acttgcaccc caaatggcaa
     1261 ctacaattgc tgcaatcaaa agccatacgg tccctccacg atagagtgaa gctgcggcga
     1321 taacgacgag cgccgccaaa gcaatgaagt cgatggcctt catataatca ctcacgaact
     1381 tcatcaaatt cctctctctg gcatctgagt gatgttccgt tgtgaataga cgaggacatt
     1441 ccgagcattt caacttgctg cgcaatatcg gacattctga catcggtcgg ctggacccaa
     1501 acataggacc attggccaac tcgacatcag cttaggggct cgaccgtgtc gtgattgggg
     1561 caattgccgt cgcgcgggag agaccgtaga cttaatccct acagtgccgc accatttcca
     1621 tccggggata gaactcgtgt tgatacgtca tgttgcgatc gtagctgcaa tcgccgcgct
     1681 gcttggtccc gtcagtctcg cgcaagccca gtccgacaac gagcgggaag agatgctgcg
     1741 cggcggcgcg cccaagaaag gcatctacaa catttttggc ttggacggca ccggtctcgg
     1801 ccgcaccagc gtgcgttatg acagtaagta tgcgccaggc accatcgtca tcaacactaa
     1861 agagcggtgg ctttatctca ttcaaggcgg cggctcggcg ctacgctacg gcatcggtgt
     1921 cggccggatc ggcttccagt ggaagggcac gcacaagatc accgcgaaaa aagaatttcc
     1981 aaattggacg gcgcccccgg agatgatcgc gcggcaaagg gatgtgccga ggcacatgaa
     2041 gggcggcgat ccggacaatc cgctcggcaa ccgcgcgatg tatctcggca gtacgctcta
     2101 ccggattcac ggctcgaacg atccggattc ggtcggcgag gcggaatcat ctggctgttt
     2161 ccggatgagg aacgaggaca tcgcagatct ctataaccgg gtactggtcg gtacaaccgt
     2221 agtggtacat taatctgtaa acagaaagac cgcctcacgg cggcacgaga tctctttacg
     2281 ccggctgcgg cggaccttcg acctcgcgtg cacgctggag gccaagctgc cgctcacgcc
     2341 ggatcacgaa cagcccggca ccggtaacaa tgctggcgcc gacatataca agcgtgtcag
     2401 gcaactcgcc gaacagccag tagccgagca gtagtgccgg ccgtggcgtg gccgtgctgt
     2461 tgatcgagca gttcacgaca ctggcgcttg atcttgcgag ccgcgcttac gtgatggagc
     2521 gcggaaacat tgtcttcaac ggcgcttcgg ctgatctgaa ggcacatccg gaaattctgc
     2581 atggcgccta tttggcaggc ggcgctgacg gttgtccccc tagataggtg agtcggtcga
     2641 acggaagact ccaaaatcac ctgcgcaagc gcacgaaggc ggtgctcccg atgggtgttg
     2701 tttggccaaa gctgcggtat gctcatggca gtagtcaccc agggaggaaa caacaatgag
     2761 cagatacacg cgccgcgacc ttatgatcgg tggtgcggct gcaggcgctg tcgcgacgct
     2821 aggactggag ccggcgcgcg ctcaggcttg gccaaaccgc cccgtcaccg tcatttgccc
     2881 atgggccgcc ggcggcggca cggacgcgac ggcccgtatc gttgcggcag tgctcgagaa
     2941 agaactcaaa caacccgtca atgtcgtcaa ccgcaccggc ggctccggtg tggtgggtca
     3001 ttcggcgatc gcaaccgcgg cccccgacgg ctacacgctc ggcatcatca cggttgaaat
     3061 ctcgatgatg cactggcagg gcctcaccga actgaagccc gacagctaca cgccgcttgc
     3121 gctcatgaac gaggatccgc ccgggatcca ggtctatgtt ggcagcccct acaagacggt
     3181 gaaggaattg gccgacgcca tcaaggccgc cccgcccggc aagctgaagg cctccggcac
     3241 cggccagggc ggcatctggc acttggcgtt ggtgggctgg ctgcaggcca tgggcctcaa
     3301 ggccgatcat gtggcctggg tgccctccaa cggcgccgcg cctgccatgc aggatctcgc
     3361 tgccggcggc ctcgacatcg tcacgtgctc ggtaccggaa gcccgcgcct tgatcgaggc
     3421 cggcaaggcg aggagcctcg ctgtgatgtc ggccgagcgt aacccggctt tcaaggacgt
     3481 gccgacactc aaggaagcta tgggtatcga ctacaccacc ggtgcctggc gtggatttgc
     3541 agcgcccaag ggactacctg cagatatcac caacgccatg acggccgcgc tcaa
//
LOCUS       DATDHO010000113         3009 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_252485, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000113 DATDHO010000000
VERSION     DATDHO010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3009
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252485"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="VIY07_02105"
     CDS             <1..359
                     /locus_tag="VIY07_02105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380577.1"
                     /translation="RYGTPPVYPSYKMVQAILGLKAAMEKAAAGKPETPAADAVIAAF
                     EGLSYETPSGRVDMKLGKGHQAIQDMAYGTFKFDAAQGQPQLVDIVRYPAECVNPPEG
                     VKSEEWIKGGFKGAKC"
     gene            417..1313
                     /locus_tag="VIY07_02110"
     CDS             417..1313
                     /locus_tag="VIY07_02110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380578.1"
                     /translation="MQKLYAILVDGTVYFSWLFIVSMGLTLTYGVMKILNIAHGSFYA
                     LGAYAAASAVGAYFAGHYPAAGSFLVLILAGIVVGGSAGLIVERGLLRPMYGRDEVVL
                     VLVTYAAFLVFEDLIKLVWGVDPYFAYQPYELLGRVSIGGIGFAVYDLGLFALAIVIG
                     VAAWWVLERTRSGKLLRAVIHDREISTAMGINVARMFTATFVIGAILGALGGAITAPA
                     ISVVPGIGVDVIVLAFAVSIIGGLGSVAGAAIGALVVGLARACAVHLLPEVELFVIYA
                     VMATVLAFRPQGLFGRPAARKI"
     gene            1315..2253
                     /locus_tag="VIY07_02115"
     CDS             1315..2253
                     /locus_tag="VIY07_02115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380579.1"
                     /translation="MRSVPILTLALAALLGAGPLMPSWLVFLLTVAFAKGLVVLGLLV
                     MMRAGLVSFGQGLYYGLGAYTAGLATNFLGVTDAIALVVLGGLVSAVAGYVLGFIMAR
                     YRDIFFAMLSLALSMILYGILVRSAALGSTDGFNLPPPNFFGFAVDGQTGRLLIYALT
                     IVMATGTAIVLHRFVNSPAGVIGEAILTNEIRVEYLGTSVTSVLHLTYVIGATTAGLG
                     GSLIAIAAGHIDPDLAYWTTSGEFVFVAILSGIGHVAAPLLGMAVFEAIRSFAFQYSP
                     YTWQMVVGISMLAVILLLPSGLWSLFTRRRRAGRTA"
     gene            2250..>3009
                     /locus_tag="VIY07_02120"
     CDS             2250..>3009
                     /locus_tag="VIY07_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012778799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380580.1"
                     /translation="MNAPLFAARGLDKRFGAVVAADNVTVEIAAGETVGIIGANGAGK
                     TTFVNMVTGYLKPDDGVILFRGVDITRMPAREVTRLGIRRSFQVAQLFSNLSVRDNAL
                     VALVCAERTRPTPTTILRTSARLAQANEILARLGIEAFADRPTLELPQGQRKLLDIAL
                     AMVGRSAVLLLDEPTSGISAQEKLPLMDLVMEAVAAESVAVLFVEHDMEVVERYAPRV
                     IAFYEGRVIADGTAAVVLRDADVRRYVVGAELHRR"
BASE COUNT          481 a          892 c          972 g          664 t
ORIGIN      
        1 agcgttatgg tacgccgccg gtctatccct catacaagat ggtgcaagcg attctcggtt
       61 taaaggccgc gatggagaag gctgctgccg gcaaacccga gacgcctgcc gcggacgccg
      121 taatcgccgc attcgagggg ctctcatacg agacgccaag cggccgagtg gacatgaagc
      181 tcggcaaggg ccaccaggca atccaggaca tggcgtatgg gactttcaag ttcgacgccg
      241 cccaaggcca acctcagttg gtcgacatcg tgcgctaccc agccgaatgc gtgaatccac
      301 cagagggcgt caagagcgag gaatggatca agggtggctt caaaggcgcc aagtgctgat
      361 gacatgatga gtgaaccgtc agtccgggcg cgctcgcgcc cgggcggaga gaagctatgc
      421 agaagctcta tgcaatcctc gtcgacggca cagtgtactt ctcttggcta ttcatcgtgt
      481 cgatggggct gacgcttact tacggcgtca tgaagattct caacattgca cacggcagtt
      541 tctatgccct cggcgcctat gcggctgcgt ccgccgtggg agcctatttc gcgggacact
      601 acccagccgc cggcagcttc ctggtgctca tccttgccgg catcgtcgtg ggtgggagcg
      661 ccgggctcat tgtcgagcga ggtctgctca gaccgatgta cgggcgcgac gaggtggtgc
      721 tggtactcgt cacctatgct gcgtttttgg tgttcgagga tctgataaag ctcgtctggg
      781 gtgtcgatcc ctatttcgcc tatcagccct atgagctgct cggccgcgta tcgatcggcg
      841 ggatcggctt cgccgtttat gatctcggtt tgttcgcact cgcaatcgtc atcggcgtcg
      901 cggcatggtg ggtgctggag cgcacgcgat caggaaagct cctgcgcgcg gtgattcacg
      961 accgcgagat ctcgacggcc atgggtatca acgttgcgcg catgtttact gcgacttttg
     1021 tcattggggc gattcttggg gcgctcgggg gggcgatcac cgcgccggcg atctcggtag
     1081 tgccgggcat aggcgtcgat gtgatcgtgc tcgcgttcgc tgtgagcatc atcgggggac
     1141 tgggcagcgt ggcaggcgcc gcgatcggtg cgctcgtggt tgggctcgct cgcgcctgcg
     1201 ccgttcattt actgcccgag gtcgagttgt tcgtgatcta tgctgtcatg gccaccgtac
     1261 tcgcatttcg gccacagggc ctgttcgggc gaccggctgc ccggaagatc tgacatgcgt
     1321 tctgtcccca tcctgacgct cgccctcgct gcactgctcg gcgctggacc gctgatgcca
     1381 tcgtggctgg tattccttct cactgtcgcc ttcgccaagg ggctcgtcgt gcttgggctg
     1441 ctggtgatga tgcgggccgg cctcgtgtcc ttcggccagg gactttacta tggcctcggc
     1501 gcctatacgg cggggcttgc caccaacttt ctcggggtaa ccgacgcgat cgcgctggtc
     1561 gttctcggcg gtcttgtgtc agcggtcgct ggctatgtgc tcggctttat catggcgcgc
     1621 tatcgcgaca tcttttttgc aatgctgagc ctcgcattat cgatgatcct ctacggcata
     1681 cttgtgcgtt cggctgccct gggttcgacc gatggattca atctgccacc gccgaacttc
     1741 ttcggtttcg ctgttgatgg gcagactggc cggctgctta tctacgcgct gaccatagtc
     1801 atggcgaccg gcaccgccat agtgttgcac cgcttcgtta attcgccggc cggtgtgatc
     1861 ggcgaagcga tccttacaaa cgagatccgg gtcgaatatc ttggcacgtc ggtcaccagc
     1921 gtgctgcatc tcacatacgt gatcggggca acgacagccg ggcttggcgg ctctctgatc
     1981 gcgatcgcgg ccggccacat cgatccggat ctcgcctatt ggacgacatc gggcgagttc
     2041 gtgttcgttg cgatcttgtc tggcataggc cacgttgcgg cacccttgct cggtatggcg
     2101 gtgtttgagg cgatccgcag cttcgccttc cagtattcgc cctacacatg gcagatggtg
     2161 gtcggcatct ccatgctcgc ggtgatcctg ttactgccct ccgggctctg gtcgttgttc
     2221 acgcggcggc gccgcgcggg acggaccgca tgaacgcgcc gctgtttgcc gcaaggggat
     2281 tggacaagcg cttcggcgcg gtcgtcgcgg ccgacaacgt gacggtcgag atcgcggccg
     2341 gcgagaccgt cggcatcatc ggcgccaacg gtgctggtaa gaccactttc gtaaacatgg
     2401 tcaccgggta tcttaagccc gacgatggtg tgattctgtt ccgcggcgtt gatatcacgc
     2461 gaatgccggc gcgcgaggtg acccgcctcg gcatccggcg gtcattccag gtcgcacaac
     2521 ttttctccaa tctgtcggtg cgcgacaacg cgcttgtcgc gcttgtctgc gctgaacgaa
     2581 cgcggccgac accgaccacg atcctgcgaa cgtcggcgcg gcttgcgcag gcgaacgaga
     2641 ttctcgctcg cctcggaatc gaggccttcg ccgatcgacc gacgctggaa ttgccacagg
     2701 gccaacgcaa actgctcgac atcgcgctgg cgatggtggg ccgctccgct gtgttgttgc
     2761 tcgacgagcc gaccagcggc atcagtgcgc aggagaaatt gccgctgatg gatctcgtga
     2821 tggaggcggt cgcagcggaa agcgtggccg tgctttttgt tgagcacgac atggaggtcg
     2881 tggaacgcta cgcgccgcgt gtgatcgcat tctacgaggg ccgggtgatc gccgacggaa
     2941 cggctgccgt cgtgctgcgt gacgcggacg tgagacgcta cgtcgtcggg gcggaactgc
     3001 atcgtcgag
//
LOCUS       DATDHO010000114         3879 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_449704, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000114 DATDHO010000000
VERSION     DATDHO010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3879)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3879)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3879
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_449704"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..562)
                     /locus_tag="VIY07_02125"
     CDS             complement(<1..562)
                     /locus_tag="VIY07_02125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY6380581.1"
                     /translation="MAKEKFQRTKPHCNIGTIGHVDHGKTTLTAAITKVLAEKGGATF
                     TAYDQIDKAPEEKARGITISTAHVEYQTDKRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLARQVGVPALVVYMNKVDMVDDPELLELVELEVRELLSK
                     YNFPGDKIPVIKGSALKALEGSDEKLG"
     gene            complement(604..2676)
                     /gene="fusA"
                     /locus_tag="VIY07_02130"
     CDS             complement(604..2676)
                     /gene="fusA"
                     /locus_tag="VIY07_02130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004447767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEY6380582.1"
                     /translation="MPRSHPIEDYRNFGIMAHIDAGKTTTTERILYYTGKSHKIGEVH
                     EGAATMDWMEQEQERGITITSAATTAFWKEKRLNIIDTPGHVDFTIEVERSLRVLDGA
                     VCVLDSNQGVEPQTETVWRQGDKYKVPRIVFANKMDKIGADFFKCLDDIKTRLGAKPV
                     AIQLPIGSEQNFKGVVDLVRMKGVVWDDESLGAKYHDIDIPAEMAEQAREYRERLVEA
                     AVELDDDATTAYLEGKLPDEATIKKLLRKAVITGAFFPVLCGSAFKNKGVQPLLDAVV
                     DYLPSPLDVPAMKGTDDKGNEVVRKADDKEPMALLAFKIMDDPFVGTITFCRIYSGTL
                     QSGTGVINSTKERKERIGRMLLMHANNREDIKEAYAGDIVALAGLKEVRTGDTLCDPQ
                     KPVILEKMEFPDPVIEIAIEPKSKADQEKLGVALAKLAAEDPSFRVSTDQESGQTILK
                     GMGELHLDIKVDILKRTYKVDANIGAPQVAFREKITQRVEHDYTHKKQTGGSGQFAAI
                     KIIAEPTAPGTPFEFENEIVGGAVPKEYIPGVEKGLESVLGSGVVAGFPVVDLKVTLI
                     DGKYHDVDSSALAFEICARQCLKEALQKGRPVLLEPIMKVEVVTPEDYTGSVIGDLNS
                     RRGQIQGQDMRGNANVINAMVPLMNMFGYVNNLRSMSQGRATFTMQFDHYSELPANVS
                     AEVQKKFA"
     gene            complement(2702..3172)
                     /gene="rpsG"
                     /locus_tag="VIY07_02135"
     CDS             complement(2702..3172)
                     /gene="rpsG"
                     /locus_tag="VIY07_02135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEY6380583.1"
                     /translation="MSRRHAADKRDIIPDPKFGNVVVSKFMNAIMYDGKKSVAEGIVY
                     GALEMIEGKTKQNPLSVFQQALDNVMPSIEVRSRRVGGATYQVPVEVRTSRRQALGIR
                     WIISAARERNERTMTERLSAELLDASNNRGNAVKKREDTHKMAEANRAFSHYRW"
     gene            complement(3184..3555)
                     /gene="rpsL"
                     /locus_tag="VIY07_02140"
     CDS             complement(3184..3555)
                     /gene="rpsL"
                     /locus_tag="VIY07_02140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEY6380584.1"
                     /translation="MPTISQLIAKPRHPLKARNKVPALQASPQKRGVCTRVYTTTPKK
                     PNSALRKVAKVRLTNGFEVIGYIPGEGHNLQEHSVVMIRGGRVKDLPGVRYHILRGVL
                     DTQGVKNRKQRRSKYGAKRPK"
BASE COUNT          657 a         1174 c         1134 g          914 t
ORIGIN      
        1 tgccgagttt ctcgtcgctg ccttcgagcg ctttaagcgc cgaacccttg atgactggga
       61 tcttgtcgcc ggggaaattg tacttggata ggagctcacg cacctcgagc tcgaccagct
      121 cgagcaattc cgggtcatcg accatgtcga ccttgttcat atacacgacc agcgccggca
      181 cgccgacctg acgggcgagc aggatgtgct cgcgggtctg gggcatgggc ccgtcagccg
      241 cagacaccac caggatcgcg ccgtccatct gcgcggcgcc tgtgatcata tttttcacgt
      301 agtcggcgtg gccggggcaa tcaacgtgcg cgtagtggcg cttatcggtt tgatattcga
      361 cgtgcgcggt cgaaatggta atgccgcgcg ccttctcttc cggcgccttg tcgatctggt
      421 cgtaggcggt gaacgtggcg ccgccctttt cggcaagcac tttggtgatc gctgccgtca
      481 gcgtcgtctt gccgtggtcg acgtgaccga tcgtcccgat attgcaatgg ggcttggtcc
      541 gctggaattt ctctttggcc atggaactct ccgttcagat ccttctgtta tcttcgtgcc
      601 cgatcacgcg aatttcttct gtacttcggc tgacacgttc gccggcaatt ccgagtagtg
      661 atcgaattgc atcgtgaatg tggcgcggcc ttgagacatg gaccgcagat tgttgacgta
      721 gccgaacata ttcatgagcg gcaccatcgc attgatcacg ttggcattgc cgcgcatgtc
      781 ctgaccttgg atctgcccgc gccgtgaatt gagatcgcca atgaccgagc cggtatagtc
      841 ctccggggtc accacttcga ctttcatgat cggctcaagc agtaccggtc tgcccttctg
      901 caatgcctcc ttcaggcatt gacgcgcgca gatttcgaac gcaagcgcgg acgaatcgac
      961 atcgtgatac ttgccgtcga tcagcgtgac tttgagatcg accaccggaa atccggcgac
     1021 gacccccgaa ccgagcactg actccaggcc tttctcgacg cccgggatgt actccttcgg
     1081 caccgcgcca cccacgattt cgttctcgaa ctcgaacggc gtgccaggcg cggtcggctc
     1141 ggcgatgatc ttgatcgccg caaactgacc cgaaccaccg gtttgcttct tgtgggtgta
     1201 gtcgtgctcg acccgctgag tgatcttttc gcggaacgcg acctggggag cgccgatatt
     1261 ggcgtcaact ttgtatgtgc gcttgagaat gtccaccttg atgtcgaggt ggagttctcc
     1321 catgcccttg aggatcgttt ggccgctctc ctgatcggtg gagacgcgga acgagggatc
     1381 ctcggccgcg agtttcgcaa gcgcaacgcc aagcttttcc tggtcagctt tcgacttcgg
     1441 ctcgatcgcg atctcaatga ccggatcggg gaattccatt ttttccagta tcacgggttt
     1501 ctgcggatcg cacagcgtgt cgccggtacg aacttccttc agacccgcca gggcgacgat
     1561 gtcaccggcg taggcttcct tgatgtcctc gcggttattc gcatgcatca gcagcatgcg
     1621 gccgatacgc tccttgcgct ccttggtcga attgatcacg ccggtgccgc tttgcagcgt
     1681 gcctgaatag atgcggcaga acgtgatggt cccgacgaaa ggatcgtcca tgatcttgaa
     1741 ggcaagcagc gccatcggct ctttgtcgtc tgccttgcgg acaacttcat tgcctttgtc
     1801 gtcggtgccc ttcatggccg gcacgtcgag cgggctcggc agataatcga ccaccgcatc
     1861 gagaagcggc tgcacgcctt tgtttttgaa ggctgagccg cacagcaccg ggaagaaggc
     1921 gccggtgatg acagccttgc ggagcagttt cttgatggtg gcctcgtcgg gcaacttgcc
     1981 ctcgagatag gccgtggtgg cgtcgtcatc gagttcgacg gcagcttcaa ccaacctctc
     2041 gcggtattcc ctagcttgtt ccgccatttc ggccggaata tcgatgtcgt ggtattttgc
     2101 gccaagggat tcatcatccc acaccacgcc tttcatgcgc accagatcga caaccccctt
     2161 gaaattctgc tccgagccga tcggaagctg gattgccacc ggctttgcgc caaggcgcgt
     2221 cttgatgtcg tcgagacact tgaaaaagtc tgcaccaatc ttgtccatct tgttggcgaa
     2281 gacgatgcgg ggcaccttgt acttgtcgcc ctgacgccag accgtctcgg tctgcggctc
     2341 gacaccctgg ttggaatcga gcacgcatac ggcgccgtcg agcacgcgaa gcgagcgctc
     2401 tacctcgatg gtgaagtcga cgtggccggg cgtatcaatg atgttgaggc gtttctcttt
     2461 ccagaatgcc gtggtcgcag ccgatgtgat ggtgatgccg cgctcctgct cctgctccat
     2521 ccagtccatc gtcgcggcgc cttcgtgcac ctcgccgatt ttgtggctct ttccggtgta
     2581 atagaggatc cgctcggtcg tcgtcgtctt cccggcatcg atgtgggcca tgatgccgaa
     2641 gttgcggtag tcctcaattg ggtggctgcg gggcataggg gatccttgaa cttttctgcg
     2701 gtcaccagcg gtaatgcgag aaggcccggt tggcttccgc catcttgtgg gtgtcctcac
     2761 gcttcttgac ggcatttccc ctgttgttgg atgcatcgag cagctcggcc gagagccgtt
     2821 cagtcatcgt acgttcattg cgttcacgcg cggccgaaat gatccagcgg atgccgagcg
     2881 cctgccggcg cgaggtgcgt acttcgaccg gcacctggta ggtcgcgccg ccgacgcgcc
     2941 gcgagcgcac ctcgatcgac ggcatcacat tgtcgagcgc ttgctggaag acggagagcg
     3001 gattttgctt ggtcttgccc tcgatcatct cgagcgcgcc gtacacgatg ccttccgcta
     3061 ccgatttctt gccatcgtac atgatggcat tcatgaactt gctgacgacg acgttcccga
     3121 acttcggatc cggaatgatg tcgcgtttat cggcggcgtg acggcgggac atgacgctga
     3181 tccttatttc ggacgtttcg cgccgtattt cgaacggcgc tgcttgcggt ttttcacgcc
     3241 ctgcgtgtcg agaacgccgc gcaggatgtg atagcggacg cccggaagat ctttcacgcg
     3301 gccgccacgg atcatgacga ccgaatgctc ctgaaggtta tggccttcgc ccgggatata
     3361 gccgatcacc tcgaatccgt tcgtgagccg caccttcgcc accttgcgca aagccgaatt
     3421 cggcttcttc ggggtggtgg tgtagacgcg ggtgcacacg ccgcgcttct gaggcgacgc
     3481 ctgcagagca ggcactttgt tgcgcgcctt cagcgggtgt cgcggcttgg caatcaactg
     3541 actgatcgtc ggcatcgtgg gccttcgcta ccttcgttcc aggaatcggc gcgaaggcat
     3601 tgctcgcgcc gcccttctca aatctctcgc ggacaaacct tgtccgcctc acttcgggct
     3661 tctcgccccg gcattgcgca cgaacgcttc cgtgcacttt gcgtgttttc cacgcgcaaa
     3721 acgaaatcgc gccatccgcc agattgcggc agggcgctct tccgttcgga cagccgcgct
     3781 gcgtcgagca ccgcggttgt tcactctcaa agtctgacag gtgctgtcag aggcagcgtt
     3841 tgagcttcat tcgtcgaggc gatgcgccga ccagtctcc
//
LOCUS       DATDHO010000115         2262 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_351353, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000115 DATDHO010000000
VERSION     DATDHO010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_351353"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1009)
                     /locus_tag="VIY07_02145"
     CDS             complement(<1..1009)
                     /locus_tag="VIY07_02145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380585.1"
                     /translation="MPREYLPLSTIFRSENVSTSIAKAHELSDYCGLPVHELVAFRAD
                     RLVVHELLIHVTTGLAVPDGRDDEDLGRNFRKIAATILDRFIAPHREELARVFEQVKH
                     KASAVIERELTIAFAEPKTPVGAGQPGDWRRLLFGKSRKPAPKPAEPVAERDQRILSQ
                     WSKKSQSSENRLEQACFAALYEVATAVISRQGRLSGDHALLSDLAVILVCNDYGSSVI
                     GDAILPFVQEAVAREGYRALPAQQKPIVMNVKGASASGKSSMRPLQKNLAGKLNLPWD
                     EFALISPDIWRKFLLDYGSLGAAYKYAGTLSGHEIEIIDKKLDRRMAERAARGEMPHL
                     LI"
     gene            complement(1354..1581)
                     /locus_tag="VIY07_02150"
     CDS             complement(1354..1581)
                     /locus_tag="VIY07_02150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380586.1"
                     /translation="MRKLLIVVFGLASLALAGVQPVLAGARKCVPVNCHVYNGTAGPV
                     RYCDQACTQTPNVQGSGPIRPIEQQKLKRQN"
     gene            complement(1627..1926)
                     /locus_tag="VIY07_02155"
     CDS             complement(1627..1926)
                     /locus_tag="VIY07_02155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380587.1"
                     /translation="MRKVLIIAFGFGLLAGTQSALAGQVEQACVNIALQQCNALGGQC
                     TTSPQYLSLHRQCVAREAAKAAAAAKAKQEKAKFIAAARNNAQPGGPRTNAKRSK"
BASE COUNT          409 a          671 c          674 g          508 t
ORIGIN      
        1 cgatcagcag gtgcggcatt tctcctctgg cagcacgctc agccatcctg cgatcgagtt
       61 tcttgtcgat gatttcaatt tcgtgtcccg acagggtgcc ggcatatttg taggcggcgc
      121 cgagcgatcc ataatcaagg agaaactttc gccagatgtc cgggctgatc agcgcgaact
      181 catcccacgg taaattgagt tttcccgcca gattcttctg gagcggccgc atcgagcttt
      241 tgccggaagc agatgcaccc ttgacgttca taacgatcgg cttctgctgc gccggcaacg
      301 cacgatagcc ctcgcgcgca accgcttctt gaacgaatgg aaggatggcg tcgccgatga
      361 cgctgctgcc gtagtcgttg caaaccagta tgacggccag gtccgagagc aacgcgtggt
      421 cacccgacag gcgcccctgt cggcttatga cggctgttgc gacttcatat aaagctgcga
      481 aacaggcctg ctccagacgg ttctcgctgc tttgcgattt tttcgaccat tgcgacagga
      541 tgcgctgatc gcgctccgcc accggttcgg ccggtttcgg cgccggcttt ctcgatttgc
      601 caaatagcag gcgacgccag tcgcctggtt gaccagcgcc cactggcgtc ttcggctcgg
      661 cgaatgcaat cgttagctca cgctcgatga cggcggaagc cttgtgcttg acctgctcga
      721 agacgcgcgc cagctcctcg cgatgcggcg cgataaatcg atcaaggatg gtcgccgcga
      781 tcttgcggaa gtttctgccc agatcctcgt catcgcgtcc gtcggggacg gcaaggccgg
      841 ttgtcacgtg aatcagcaat tcgtgaacga ccaggcgatc agcgcgaaag gcgacaagct
      901 catgcaccgg taggccgcag tagtcgctca attcatgcgc ttttgcgatg ctggtggaaa
      961 cgttctcgct gcggaatatc gtcgagagcg gcaaatactc ccgcggcaac cgggaatcca
     1021 ggcccggatt ccaggcccca tgttcggccg acaacggatc aggacccatg gttcacggac
     1081 caacccggcg atcgtgccta ttcgcggttc aaggcccgcc ggaatgaact ctgagtattc
     1141 gcactatcct ggcatcgtgt ctaatcgaat gcctttcgtg gaatgaatgg gtgtaggggg
     1201 tggaattgtg cataacctcc gttcattccc gcccccgcct tcgcgggggc aggctccagc
     1261 gggaatccag agccaactat ttccacgtct gcaatttgcc gctctgggtc cccgcgtccg
     1321 cagggacaag cgggggacag gagcgcgtac ccttcagttc tgcctcttga gcttctgctg
     1381 ctcgataggc cgtatcggtc cggatccctg gacattcgga gtttgcgtac aggcctgatc
     1441 acagtagcga accgggccag ccgtgccgtt gtacacatgg cagttgacgg gcacgcattt
     1501 gcgcgcgccg gccaagaccg gctgcacgcc ggcgagggcg aggctggcga ggccgaaaac
     1561 gacgataaga agcttgcgca tttttgattt cctgactgct taactatcgt tgatcgccgt
     1621 tacgacttat ttggagcgct ttgcattcgt gcggggacca ccgggctgtg cgttgtttcg
     1681 ggctgccgct ataaacttgg ccttttcttg tttggctttc gcggcggccg cagctttcgc
     1741 ggcttctctg gctacgcact gacgatgaag cgacagatat tgtgggctgg tcgtgcactg
     1801 gccgcccagc gcgttgcact gctgcagggc aatgttgacg caggcctgtt cgacttgccc
     1861 ggccagcgcg gactgggtgc ctgcgagaag cccgaagccg aaggcgatga tgagaacttt
     1921 gcgcatttcg atttttccgt ttgcgtgacg ttgttcgctt gaattcgttt cgatctgctt
     1981 gaatcgacct gctgagcgca gcgcgacctc tccgggaacc gaagaggccg tgtatctgct
     2041 ggcgattagt tctgtctcct gaccttttgc tcctggatgg tccttgtccc gctcgaactg
     2101 ccgggcttcc ctgagctgtt cgtgcacacc acacgtgccg agaagcaacg cggtttgccc
     2161 gaattacccg gtgcccactg gtcgcatacc tctttacagt tctgggcagc ggaagccgac
     2221 tgcacgctga ccaaagcagc gaggctcgcg atgccgaggg cg
//
LOCUS       DATDHO010000116         2198 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_401485, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000116 DATDHO010000000
VERSION     DATDHO010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_401485"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(109..696)
                     /locus_tag="VIY07_02160"
     CDS             complement(109..696)
                     /locus_tag="VIY07_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HEY6380588.1"
                     /translation="MGLIDVLNGMQNGPHGQREPNANPSAGSSGMSPITMAILGLLAY
                     KAVKSFTGSQQPSPAPANPRVQTGAKPTSVNAPESSGGLSDLMKGGLGGLLAGGAAGS
                     ILSGGLNDLLKQFQQNGQGDAVDSWVGTGPNKPIPPKDLANALGADKISTLSSQTGMS
                     RDDLLNALSQYLPQAVDRLTPQGRLPTEQEAQRMF"
     gene            1048..1440
                     /locus_tag="VIY07_02165"
     CDS             1048..1440
                     /locus_tag="VIY07_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3597 domain-containing protein"
                     /protein_id="HEY6380589.1"
                     /translation="MSVFGKIMGAIFGQGSAQAANASPTSAPGTTSSPSVTPANAPPT
                     QTVDVAAIVDKAAAAKGEKLAWRTSIVDLMKALDLDSSLSARKELAKELNYTGDTSDT
                     AKMNVWLHKQVMTKLAANGGKLPADIKT"
     gene            1519..1812
                     /locus_tag="VIY07_02170"
     CDS             1519..1812
                     /locus_tag="VIY07_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380590.1"
                     /translation="MSGVLINLLIQVIAGAIGGNVAGGASKELSLGTAGNTIAGAIGG
                     GVGGQLLTALIPALAQAGSSVDIGALIGQFAGGGIAGAILTAIVALVKNRMAA"
BASE COUNT          442 a          648 c          648 g          460 t
ORIGIN      
        1 aatccataga attcccatgc gcccctcctg ggtctagcgt caaaccacct ggcggccggc
       61 ggctggttcc gtcggccgtt aagtggtgca tacaacagta cgcatgcatc aaaacatgcg
      121 ctgtgcctct tgctcggtag gcaatcgtcc ttgaggcgtc agacgatcga cggcttgagg
      181 caaatattgg ctcagcgcat tcagcaagtc gtcgcgcgac atgccggtct gcgaggacag
      241 ggtgctgatc ttgtccgctc cgagcgcgtt agccagatct ttgggcggta tcggcttgtt
      301 gggacctgtc ccgacccaag aatcaacggc gtcgccctgt ccgttttgct gaaattgctt
      361 gaggagatcg ttcaagccgc cgcttaatat gctgccggca gcgccgcctg caagcagccc
      421 gcccaatccg cctttcatca gatcgctcag tccgccactg ctttccgggg cgttgacgct
      481 tgtgggcttt gcgcccgtct gcacgcgagg attcgctggc gcaggagatg gctgctgcga
      541 gccagtgaaa cttttgaccg ccttgtaggc cagcagaccg aggatcgcca tggtgatagg
      601 cgacatgccg ctgctgccgg cgcttggatt ggcgttgggt tcacgttgtc catgcggtcc
      661 attctgcatc ccgttgagga catcaatcag gcccatgtat cgcctccgtt gaacgagaag
      721 ttattcctga cgctatgacc atgcgatgac gagaacatgg cgcgcgccta tgcccgttac
      781 tcgctcgcgc gaatttgact gtgactgttc gtcgtgcggt gaagtcatta caagcactta
      841 agcgccgcgg taccgaagta gcgcttgcca caaagaacat tgcccgctca ttctcgacgc
      901 ttggtcgcta cggtcgagat ggacctaggt cctatatcca gtttcggctt tggaatggca
      961 tctttcggcg gccatgggcg tgacggattt ccaaaagttc cactgccctt gtgaccggtt
     1021 ccgttgcaga cagacgggag aacaaacatg agtgttttcg gaaaaatcat gggcgcgatt
     1081 ttcggacagg ggtccgcgca ggctgcgaat gcatcgccca cgtcagcgcc tggcaccacc
     1141 tcatcgccca gcgttactcc ggcaaatgcg cctccgaccc aaacggtcga cgttgccgca
     1201 atcgtcgaca aggctgcagc ggcaaagggc gagaagcttg cctggcgaac ctcgattgtc
     1261 gatctgatga aggcactgga tctcgacagc agcctgagcg cgcgaaaaga actcgcgaaa
     1321 gaactgaact ataccggcga taccagtgac actgccaaaa tgaatgtctg gttgcacaag
     1381 caggtcatga cgaaacttgc cgccaatggc ggcaaactac cggccgacat caagacgtga
     1441 actgaagcac gaaccgggac gtaaacagga acgtgaactc caagggagag aaaatccact
     1501 cgctatgagg acgctacaat gtcaggcgtt ctcattaacc tgctgattca ggttattgcg
     1561 ggagcgatag gaggcaacgt agctggcggg gcttcgaagg aactcagtct gggcaccgcc
     1621 ggaaacacga ttgccggcgc aatcggcggc ggtgtcggcg gacaacttct gaccgccctg
     1681 attccggccc ttgcgcaggc cggcagctcg gtcgacatcg gcgcactcat cgggcaattc
     1741 gccggcggcg gcattgccgg cgcaattctg actgcgatcg tcgcgctggt gaaaaaccgg
     1801 atggccgcct agccggcctg tccgaagagc gttttgccct gccttgaccc gccgggctcg
     1861 cctgagcggg aggtttggtt ttttgcaccc cttgccgaca ttgcacctaa aacccggcgc
     1921 aacccggccg ctttaataat tcgtcaacca tgctcgcgca ggatcgcgac tacacgcatt
     1981 gcttgtgggg acttgccttt tgcgtatcaa gtacagctgg ccctgccttg tcggggctgc
     2041 ctttctggcc ttttgcaata cgcccctgcg cgccgaggac ggcgtgttca aggaacgaat
     2101 cgtttttggg caggtcgccg cgcttaacgg ccctgcgcag gcgctcggcc agggtatgcg
     2161 cgaaggcatc cttgccgcat tcgaagaggc caatcgcg
//
LOCUS       DATDHO010000117         2954 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_252822, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000117 DATDHO010000000
VERSION     DATDHO010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2954)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2954)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2954
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252822"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..296
                     /locus_tag="VIY07_02175"
     CDS             <1..296
                     /locus_tag="VIY07_02175"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6380591.1"
                     /translation="PHAYIAPLAITAIGFGFYMLHNTLQTNATQMTPEARGTAVAIFS
                     SALYLGQTLGVAINGVIFDHFTAVPVFLIAAAGLLALALWFARALRRRRETET"
     gene            complement(419..1057)
                     /locus_tag="VIY07_02180"
     CDS             complement(419..1057)
                     /locus_tag="VIY07_02180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2497 domain-containing protein"
                     /protein_id="HEY6380592.1"
                     /translation="MTQAAKAQEPSMEEILASIRRIIADDDASKPAKPPESAAPPPKP
                     SSAVAPPPSRPAPMPSKALTPPPGQKPAAPSLPASNSQEDIDAMLAELDGSKAAPKPP
                     GADVLDLTEAMAAPAPAPPFRTIDGSSDVVFSNKPAPPLDRGLISNETIAAVDSAFNT
                     LAHTIIGQNARTLEDLVKEMLRPMLKSWLDDNLPGLVERIVRAEIERVSRGR"
     gene            complement(1231..2646)
                     /locus_tag="VIY07_02185"
     CDS             complement(1231..2646)
                     /locus_tag="VIY07_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family outer membrane protein"
                     /protein_id="HEY6380593.1"
                     /translation="MAGWGLCKGVRGLAVSTTACAGWLLAAQPVFSDTLEGALVLAYQ
                     NNPTLNAQRASVRATDEGVPQALAGYRPRVTVNGAVGSQYTDSLTRSATFAASYQQLS
                     GQMTPSNVGLTATQTLFNGFQTPNRTRQAESQVQAARETLRVAEQVTLLNAATAYMNL
                     LRDSAILDLQRRNVEVLQEQLRQTRDRFNVGEVTRTDVAQSESRLAAGRSQVLSAEAI
                     YTASVATYRQVIGVQPGRLAAGSPVDRFSPSTQAASIGLGTATHPAVTSAQYSVDAAL
                     LQVKVAEGALYPTLALQGNVQQAYESGLLQLRTFNASAIAQLTVPIYQGGAEYSLIRQ
                     AKETLGQRRLDLDTARDQVRQSIVQAWGQLEAAKANIEATQAQVQAAEIALNGVREEA
                     RVGQRTTLDVLNAQQELVNARVALVSAQRDRVVASYTLLSAVGRLSPQVLGLRVPVYD
                     ANVHYQQVRDVWAGVRTPDGR"
BASE COUNT          521 a          996 c          903 g          534 t
ORIGIN      
        1 ccccgcacgc ctacattgcg ccgctggcta tcaccgccat cggcttcggc ttttacatgc
       61 tgcacaacac attgcagacg aatgccacgc agatgacgcc ggaagcacgc ggtaccgcgg
      121 tcgcgatttt ttcctccgcg ctctatctcg gacaaacgct gggggtcgcg ataaacggag
      181 tgattttcga tcacttcact gccgtgcccg tgttcctgat tgcagcggca ggtctgcttg
      241 cactcgcttt gtggttcgcg cgcgcgctga ggagacggcg agagacggaa acctaaagtt
      301 tatttgcaag gtccaaacaa ccttcgttca ttcccgcgcg agcgggaatc cagttttgca
      361 ttcggggaaa tcgcaagttt tgttgggtcc ccgctttcgc ggggacgaac ggaagtggtt
      421 agcgtccgcg cgagacgcgt tcgatctcgg cacgcacgat gcgttcgacg agaccaggca
      481 gattgtcgtc gagccaggac ttgagcatcg gccgcagcat ttccttgacc agatcttcga
      541 gcgtgcgcgc attttgcccg atgatggtgt gcgcgagcgt attgaaggcg ctgtcaaccg
      601 cggcgatcgt ttcgttcgag atcaacccgc gatcgagagg cggcgcaggc ttgttgctga
      661 acacgacgtc ggatgacccg tcgatcgtgc ggaagggcgg cgcaggcgcc ggggctgcca
      721 tcgcttcggt caggtcaagc acgtcagccc caggcggttt cggcgcagcc ttcgatccat
      781 cgagctcagc cagcatcgca tcgatgtctt cctgactgtt cgatgcgggc aggcttggcg
      841 cggcaggctt ttgcccgggt ggcggcgtta gagcttttga tggcataggc gctggacggc
      901 tgggcggagg agcgacagca gacgaaggct tcggcggcgg cgctgcgctt tcaggcggct
      961 tggcaggctt gctcgcatca tcgtccgcga tgatacgccg gatggaggcg aggatttcct
     1021 ccatcgaggg ctcttgcgcc ttcgccgctt gcgtcattcg ttcaacaatc ccgacaccat
     1081 gccctgcgct tcgcgcaaca gcgactcagc cggcgcgaat cgctgtcgta tacgtttata
     1141 cgccagagga gtaccgcttt ggcagatgga aaaccctgtc cgcacattca actgtggaca
     1201 tgagaaatga acgggcgttc tggtacgccg ctagcgtccg tcgggggttc gcacgccggc
     1261 ccagacatcg cgcacctgct ggtagtgcac gttggcgtcg tagaccggca cccgcaggcc
     1321 gagcacctgc ggcgacagcc gtcccaccgc cgagagcagc gtgtaggagg ccaccacacg
     1381 gtcgcgctgc gcgctcacca gcgcgacccg cgcgttcacc aattcctgct gcgcgttgag
     1441 cacgtcgagc gtggtgcgct ggccgacccg cgcctcctcg cgcaccccgt tgagcgcgat
     1501 ctccgccgcc tgcacctgcg cctgcgtcgc ctcgatattg gccttcgccg cctcgagctg
     1561 gccccaggcc tgcacgatcg actgccgcac ctggtcgcgc gcggtgtcga gatcaagccg
     1621 ccgctgaccc agcgtctcct tcgcctgccg gatcagcgaa tactccgccc cgccctgata
     1681 gatcggcacc gtcagctgcg cgatcgccga ggcgttgaac gtgcgcagct gcagcaagcc
     1741 cgactcgtag gcctgctgca cgttgccctg caacgccagc gtcggataaa gcgccccctc
     1801 cgccaccttc acctgcaaca gcgccgcatc gacgctgtac tgcgcgctcg tcaccgccgg
     1861 gtgcgtcgcc gtgccaagcc cgatcgaagc cgcctgcgtc gacggcgaga agcggtcgac
     1921 cggagaaccc gccgccagcc gccccggctg aaccccgatc acctgccggt aggtcgcgac
     1981 cgaggccgtg tagatggcct ccgcgctcag aacctgcgag cgcccggcgg ccagacgcga
     2041 ttccgactgc gcaacgtcgg tgcgcgtcac ctcgccgaca ttgaagcggt cgcgcgtctg
     2101 ccgcaactgc tcctgcaaaa cctcgacgtt gcgccgctgc agatccaaaa tcgcgctgtc
     2161 gcgcaaaaga ttcatgtagg cggtcgccgc gttgagcagc gtgacctgct cggccacccg
     2221 caacgtctcg cgcgccgcct gaacctggct ctccgcctgc cgggtgcggt tcggagtttg
     2281 aaagccgttg aacagcgtct gcgtcgccgt cagcccgaca ttgctcggcg tcatttggcc
     2341 cgacaactgc tgatagctcg ccgcaaacgt cgccgagcgc gtcagcgagt cggtgtactg
     2401 cgagccgacc gcgccgttga ccgtcacccg cggccgatag ccggccagcg cctgcggcac
     2461 cccttcatcg gtcgcgcgaa ccgaggcgcg ctgcgcattc aaagtcggat tgttctgata
     2521 ggcgagaacc aaagcccctt cgagggtgtc cgaaaagact ggctgggcag ccaacaacca
     2581 tccggcacac gcggtcgtgc taaccgcaag cccccgcacc cctttacaaa ggccccaccc
     2641 cgccattcaa accccgtccg tcacgcgacg gctcgcgcca gaatcgcgtc aactcatgga
     2701 aacggaacaa taagcgcgtt agcctgggct taaaaccccc tgagggctta gtccccgcaa
     2761 tttggatgcg gactggggta ttttcgcaac gtttggaacg cgcatattgc tcagaaggcg
     2821 aaaaccgggg atttggcaaa tccaggcagg acggccgcgt tggcatcgaa aatgggccgt
     2881 ccaccgagtt cgtccccgct cctgcaataa aacatggcct tggcgccggg gccgctgccc
     2941 aggataccca ccag
//
LOCUS       DATDHO010000118         5961 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_252825, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000118 DATDHO010000000
VERSION     DATDHO010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5961)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5961)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5961
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252825"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..826)
                     /locus_tag="VIY07_02190"
     CDS             complement(<1..826)
                     /locus_tag="VIY07_02190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008128166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6380594.1"
                     /translation="MTWIGEHLGPLMFAGMIIFMLIGYPAAFSLAATGLFFGFIGIEF
                     GLIRPDFLGNLTYQLFGIVSNDLLLAIPFFTFMGAILERCGLAEDLLDSFGQLFGPVR
                     GGLSYAVIFVGAILGAITGTVAASVIAMGVISMTPMLKYGYSVRHTMGVIAASGTITQ
                     LIPPSLVLVVLADQLGRSVGDMYAGAFGPSLLQVLLFCSWVLIVSIIWPESVPALPKE
                     ARTLQGWQLWKRCMRGMIPSLGLIFLVLGTIFMGLATPTEAGAMGVVGAIALAWFYG"
     gene            complement(823..1365)
                     /locus_tag="VIY07_02195"
     CDS             complement(823..1365)
                     /locus_tag="VIY07_02195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012759003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY6380595.1"
                     /translation="MKVLLSLSRGIDWFNTKLAVLANWMVLLAALISAGNAASRYIFS
                     ESSNGWLEIQWYMFAAMVLLGAPYALKMNEHVRVDLFYGMFASERTQIWIDILGGIFF
                     LLPICVILTYFTWPWFVESWTINEASSNAGGLIRWPVKLLLPVGFVLMALQGVSEIIK
                     RIAALEHVIDAKFKYEKPLQ"
     gene            complement(1626..2654)
                     /gene="moaA"
                     /locus_tag="VIY07_02200"
     CDS             complement(1626..2654)
                     /gene="moaA"
                     /locus_tag="VIY07_02200"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEY6380596.1"
                     /translation="MAAIVSVIEKPSALIDPFQRAITYLRVSVTDRCDFRCVYCMAEH
                     MTFLPKADLLSLEELDRLCSAFIAKGVTKLRLTGGEPLVRRGIMTLVQSLSRHLGTGA
                     LKELTLTTNGSQLQTYASELKASGVQRINVSLDTLDADKFRAITRWGDLKKVLAGIDA
                     AQAAGLQVKINAVALKGVNEEELPNLLEWSHGRGMDLTVIEVMPLGDIDESRLDQYLP
                     LSIVRGRLAERYTLEDIAYRTGGPARYVRVKETGGRLGFITPLTHNFCESCNRVRVTC
                     TGTLYMCLGQNDAADLRKPLRASESNQPLYAAIDEAITRKPKGHDFVIDRRHQKPALE
                     RHMSMTGG"
     gene            complement(3402..4076)
                     /locus_tag="VIY07_02205"
     CDS             complement(3402..4076)
                     /locus_tag="VIY07_02205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEY6380597.1"
                     /translation="MPGPTIVFDLDGTLIDTASDLVQTLNVIFEREGLAPLPFEAGRN
                     FVGGGVKAMIVRALEAKRRVFPPARIQRMFEDFIAHYRDHLAEHSRPFPGLVDALDAL
                     AARDCRLAVCTNKLEHLSVHLLDRFGLADRFVAICGQDTFGVQKPNPEILRRTVAAAR
                     GTLQQAIMIGDSITDIHTARASGIPVIAVEFGYSESPVTQFDPDRTISHFSQLPATIA
                     AVFPAI"
     gene            4229..4927
                     /gene="rpiA"
                     /locus_tag="VIY07_02210"
     CDS             4229..4927
                     /gene="rpiA"
                     /locus_tag="VIY07_02210"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEY6380598.1"
                     /translation="MNPDAQKHAAAARATDFVRPGMRLGLGTGSTAKHFVELIGERVR
                     AGLDVLAVPTSEATSAEAKRCGIALTTLEETPELDLTVDGADEVGPGLCLIKGGGGAL
                     LREKIVASASARMIVIADQSKWVTQLGRFPLPIEVVSFGLAATERALEKAIRAIQKPG
                     PLVLRRQKDGEVFVTDGGHWILDAALAHIDDPVTLAHAISGVPGVVDHGLFIGLAHMA
                     IIGGPDGVKIAERP"
     gene            4953..5462
                     /locus_tag="VIY07_02215"
     CDS             4953..5462
                     /locus_tag="VIY07_02215"
                     /inference="COORDINATES: protein motif:HMM:NF021361.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEY6380599.1"
                     /translation="MSVTEAIKKAARPAALGIMLAAAGISQAQQPSASAMATAKELIT
                     VTGATTLFAPLIAGVVEQAKNLYLQQDPSLAKDLNEIAAQLRNDLQPRFTELTDEVAR
                     LYATNFTDQELKDILTFYKTASGKKLLAEQPRLVDSSMKFAQVWANRLSDQVVVKMRD
                     ELKKRGHAL"
     gene            5519..>5961
                     /locus_tag="VIY07_02220"
     CDS             5519..>5961
                     /locus_tag="VIY07_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6380600.1"
                     /translation="MADYDVDLFVIGAGSGGVRAARVASSYGARVMIAEEYRVGGTCV
                     IRGCVPKKLLVYASRFSDEFEDAAGYGWSVGKPEFDWATLIANKDREIARLEAAYTTT
                     LERYNVKIAKNRAVLEDEHTVRLATGERVRAQTILIATGARPHHGT"
BASE COUNT         1362 a         1673 c         1757 g         1169 t
ORIGIN      
        1 tgccgtagaa ccatgccagc gcgatcgccc cgaccacgcc cattgcaccg gcttcggtcg
       61 gtgttgcgag ccccatgaaa atcgtgccca gcaccaggaa gatcaggccc agcgatggaa
      121 tcatgccacg catgcagcgc ttccagagct gccagccctg aagcgtgcgg gcttcctttg
      181 ggagcgcggg gacgctttcc ggccagatga tgctgacgat cagcacccag ctgcaaaaca
      241 gcagcacctg gagaaggctt ggaccgaacg cgccggcata catgtcaccg acggaacgcc
      301 ccagctggtc ggccaggacg accagcacca gcgagggcgg gataagctgc gtaattgtgc
      361 ctgacgcggc gatcacgccc atggtgtgcc ggacggaata gccgtatttg agcatcggcg
      421 tcatcgaaat cacgcccatg gcaatcacgg aggcagcgac agtgccggta atcgcgccga
      481 gaatcgcgcc gacaaaaatc accgcgtagg agagtccacc gcgaacagga ccaaaaagct
      541 ggccgaacga atcgagaaga tcttcggcaa ggccacaccg ttcgagaatc gcgcccatga
      601 aggtgaagaa ggggatcgcc agcagcaggt cattcgagac gatgccgaac agttgatagg
      661 tcaggttgcc aaggaagtcc gggcggatga ggccgaactc gatgccaata aatccaaaaa
      721 acaatccggt agccgccagc gagaatgccg ccggatatcc gatgagcatg aaaatgatca
      781 tgccagcgaa catcaggggc ccgaggtgtt cgccgatcca ggtcattgca agggcttttc
      841 gtatttgaac ttggcgtcga tgacgtgctc aagcgctgcg atccgcttga taatctctga
      901 aacaccctgc agagccatca agacgaaccc gaccgggagc aggagcttca ccggccaacg
      961 gatcaacccg ccggcattcg aggaggcttc gttgatagtc caagactcaa cgaaccatgg
     1021 ccaggtgaaa taggtgagga tcacgcagat cggcagcaga aagaaaattc cgccaagaat
     1081 gtctatccag atttgcgttc gctctgacgc aaacattcca tagaacaggt cgacgcggac
     1141 gtgctcgttc atcttgagag cgtagggcgc gcccagcagc accatcgccg caaacatgta
     1201 ccattggatt tcaagccagc cgttggagct ttcactgaaa atataacggc tcgccgcgtt
     1261 gccggcgctg ataagcgccg ccagcaaaac catccagttc gcaagaacgg ccaatttggt
     1321 attaaaccag tcgatcccgc gactgagtga aagtagaacc ttcacaccct ctccccacag
     1381 aggcttagga agttatcccg gccccactgt ccccccggac ctcagcctgc aattcggcag
     1441 agccaagcct accaacctta ctccgatgca gccataaggc gtcaatggag aatttggttt
     1501 aaccgcaatg taagtaagga tgagagaatg cgcctcgaac caatcgtagg gaacctgcat
     1561 tgtgggatac ggcctgaaat ccacactaag gcgggataaa ccgcccattc cgatgcattc
     1621 tggcgtcagc cgccggtcat gctcatgtgc cgttctagcg ccggcttctg gtgccgccga
     1681 tcaattacaa aatcatggcc tttcggcttc cgcgtgatcg cctcatcgat cgcggcgtac
     1741 aaaggctggt tactttccga cgcacggagg ggcttgcgca aatccgccgc gtcgttctgt
     1801 ccaaggcaca tgtacagagt gcccgtgcag gtgacacgga ccctgttgca cgattcacag
     1861 aaattgtgtg tgagcggcgt gataaatccc agccgaccgc cggtttcctt cacgcggaca
     1921 tagcgcgccg gtccgccggt gcggtaggcg atgtcttcaa gcgtataacg ctcggccagc
     1981 cgtcctcgca cgatggagag tggcaggtac tgatcaaggc gcgattcatc gatatcgcca
     2041 agcggcatga cctcgatcac ggtgagatcc atgccgcgtc catgactcca ttcgagcagg
     2101 tttgggagct cttcttcgtt cacgcctttg agtgccacgg cattgatctt gacctgcaaa
     2161 cccgctgcct gcgcggcatc gatccccgcg agcacttttt taagatcgcc ccagcgcgta
     2221 attgcacgaa acttgtcggc gtcgagcgtg tcgagcgaaa cattaattcg ttgaacgccg
     2281 ctggctttga gttcagatgc ataggtctga agttgtgagc cattggttgt cagtgtcagt
     2341 tccttcaatg cgccagttcc gagatgtcgc gaaagcgatt ggaccaacgt catgatcccg
     2401 cgacgcacca gcggttcacc tccggtgagg cgcaacttgg tcacgccttt cgcaataaac
     2461 gcgctgcaaa gacggtccag ctcctccagg ctcaggagat cggccttcgg taggaacgtc
     2521 atatgttccg ccatgcaata gacgcagcgg aaatcacacc ggtcggtcac cgagacgcgc
     2581 aaataggtga tggcgcgctg gaacggatcg atcaacgcac tcggcttctc aatcactgaa
     2641 acaatggcag ccactgccgt cgtccatacc tgcgcagaat tgttgcaagt gtatatagga
     2701 atagtcgccg atatttgcca ccgggtccag taagcgactg ggttgtcaag gagcccttcg
     2761 tttagaaacc ggcgcgcact attggcgtat cggtggcgga cttgagggcc aaggcgatga
     2821 agggctttga acgggggaag ccgtcatagg cgcacctgcc ggtgccgcag ccgatttggg
     2881 tcgggcagcc ggcttcttcg ccgaaggttt ggctggcttc ttcgaggagg gagccgccgg
     2941 tgttagttcg acgacaactg ggttcggccc caatctcggc ggctcaccta tcgatgtgat
     3001 tgcctgaagg cgttctgtct ccggctgata gccgctaaga gtgaaagtga ctgacgaggc
     3061 cgcgtcgacg ggaagcgcaa gcgcgcacgg tgtacgacag gtttggccat tggacgcctt
     3121 ggcttcggcg cccgggggtt cggactccag actaaccgtg tccaaagatg cgcccgactt
     3181 gaacgcatcg agacttgcca agtcggaggt tgacgaacat gccgcgagcg caaatgcgct
     3241 gccgattatc gcgagaactc ggtacatcat gctagttgtc ccagtcgagc ggcgagtcgc
     3301 cgccaccccc tttttggagg atacgagcgt cgtcatacag gtgcaacatt ccgggtcccc
     3361 taaatgttat tacatcaacc gctaatttca cgccatagca atcaaattgc agggaaaacg
     3421 gcggcaattg tcgccggtaa ttgagaaaaa tggctgatgg tccggtcggg atcgaactgg
     3481 gtgacgggac tctcgctgta gccaaactcg acggcaataa cgggaatccc gctcgctcgg
     3541 gccgtatgta tatctgtaat tgaatcgccg atcattatgg cttgctgcag cgttccgcgt
     3601 gcggcggcca cagtacgccg caagatctcc gggttcggct tctgaacgcc aaatgtgtct
     3661 tgcccacaaa tcgcaacaaa gcgatcagcg agtccaaatc gatcaagcaa gtgcacggaa
     3721 agatgctcaa gcttgttggt acatactgca agacgacagt ctcttgctgc tagcgcgtcg
     3781 agtgcatcta cgagtcccgg aaaagggcgc gagtgctcgg ccaggtgatc gcgatagtgc
     3841 gcgatgaagt cttcaaacat tcgctggatc ctggccggcg gaaaaacgcg cctcttggct
     3901 tcgagggcac gaacaatcat cgcctttacg ccacccccga cgaaattccg tccagcttcg
     3961 aaaggcagcg gcgccaaacc ttctcgctcg aaaatcacgt taagcgtttg gacgaggtcc
     4021 gacgcggtat cgatcagcgt cccatcaaga tcaaagacaa tggtggggcc gggcatggtg
     4081 gatcgctagc ctccgttggg tgaacttgca agccggattt accaacgacc agagctccga
     4141 caaatttacc tatccatgcc ggacgatagg agctagatag gcatgacaga caatggttag
     4201 ttaatgttca agcgcttgat cgtcaccaat gaatcccgac gcccagaaac acgcagccgc
     4261 cgctcgggcc actgatttcg ttcggcccgg catgcgactt gggctcggca ccggatcgac
     4321 agcgaaacat tttgtggagc tgatcggcga acgtgttcgc gcaggcctcg atgttttggc
     4381 ggtgccgacc tcggaagcga cgtctgcgga ggcaaagcgt tgcggtatcg cgctgaccac
     4441 tttggaagag acgcccgagc tcgatttgac cgtagacggc gccgacgaag tcggtcctgg
     4501 cctctgccta atcaagggcg ggggcggtgc gttgctaagg gaaaagatcg ttgcatcggc
     4561 ctctgcacgc atgattgtga tcgccgacca aagcaaatgg gtcacgcagc tcggccgctt
     4621 tccactgcca atagaagtgg tttcgtttgg gctggcggcc accgagcgtg ccttggaaaa
     4681 ggcgatccgc gccattcaaa agcctggccc actggtactg cggcggcaga aggatgggga
     4741 agtcttcgtt acggatggtg gccactggat tcttgacgcg gcgctcgcgc atattgacga
     4801 tccggtaaca ttagcgcatg cgatttcagg cgtgcccggc gtggtggatc atggtctgtt
     4861 tattggcctc gcgcacatgg ccattattgg cggcccggac ggcgtaaaaa tcgccgaacg
     4921 gccgtgaatc tctagctaga tggagtttgt aaatgagcgt caccgaggcc atcaaaaagg
     4981 ctgccaggcc cgcagcactg gggataatgc tggctgcagc gggcatatcc caagcacagc
     5041 agccgtccgc gagtgcaatg gcgaccgcaa aggaattgat cacggtgacc ggcgccacaa
     5101 cgttatttgc tccgctcatc gcaggcgtcg tggaacaggc caagaatttg tatttgcagc
     5161 aggaccccag cctggccaag gatttgaatg agatcgcagc gcagctacgc aacgaccttc
     5221 aaccgcggtt cacggagttg actgacgagg tagcgcgact ctatgcgacc aatttcacgg
     5281 accaggagct caaggatatt ttgacctttt acaaaaccgc gtcgggaaag aagttgttgg
     5341 ccgaacaacc gaggcttgtc gattcaagca tgaagtttgc gcaggtttgg gcaaacagac
     5401 tgtccgacca ggtcgttgta aaaatgcgcg atgaactgaa gaagcgaggc cacgcgcttt
     5461 gatgggcaag cgcaagcggg cagtcgacgg tccttgctag cgcgggtgga gcgggcttat
     5521 ggccgattac gacgtcgatc tttttgtcat cggtgcgggg tccggtggcg tgcgcgctgc
     5581 gcgagttgcc tcgagctatg gggcgcgcgt catgatcgcc gaagaatacc gtgtcggtgg
     5641 cacctgcgtc atccgcggct gcgtgccgaa aaagcttctg gtgtacgcgt cgcgtttttc
     5701 ggacgagttt gaggatgccg ccggttacgg ttggtcggtt ggcaagccgg agtttgattg
     5761 ggcgacgctg atagccaaca aagaccgaga aatcgcccgc ctggaggccg cttacacgac
     5821 aactctcgaa cgttacaatg tcaaaattgc aaaaaaccga gcggtgcttg aggacgagca
     5881 tacggttcgc ctggcaacgg gcgaacgcgt acgggcccag acaattctca ttgccaccgg
     5941 tgcgcggccg caccacggaa c
//
LOCUS       DATDHO010000119         2245 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_252902, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000119 DATDHO010000000
VERSION     DATDHO010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2245)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2245)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2245
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252902"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..384)
                     /locus_tag="VIY07_02225"
     CDS             complement(<1..384)
                     /locus_tag="VIY07_02225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEY6380601.1"
                     /translation="MADIRVPTLGESVTEATVGKWFKQQGDTVAVDEPLVELETDKVT
                     LEVPAPAAGVLSEVAVKNGDTVAVGALLGQIKEGAGAAPKAAAPTATKPAASPTGAPD
                     EKTAKTKPIGAGPEQPQPREMPLPPS"
     gene            complement(501..>2245)
                     /locus_tag="VIY07_02230"
     CDS             complement(501..>2245)
                     /locus_tag="VIY07_02230"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEY6380602.1"
                     /translation="CFGLSDLKGYRTGGSLHFIVNNQIGFTTYPRYSRSSPYPSDVAK
                     MIEALILHVNGDDPEAVVFAAKVATEYRQTFQRPVVIDMFCYRRFGHNEGDEPAFTQP
                     LMYKKIRSHPSTLEIYGKKLIGEGVVTEGEIETMKAEWRRRLDAEFEAGQGYKPNKAD
                     WLDGRWSGLKAARDAEDPRRGNTGVDATELRDIGKKITTVPQGFTVHRTIQRFLDARA
                     KAIESGEGIDWATGEALAFCSLLKEGHRVRLSGQDSERGTFSQRHSVLFDQNTEERYT
                     PFNHLGNPQGRFEVLNSMLSEEAVLGFEYGYSTAEPSALTLWEAQFGDFANGAQVVFD
                     QFISSGERKWLRMSGLVCLLPHGYEGQGPEHSSARLERYLQMCAEDNMQVANCTTPAN
                     YFHILRRQLKREIRKPLILMTPKSLLRHKRAVSRLDEMTNGTSFHRLLWDDAQLLPDQ
                     QIKLVPDDKIRRVIMCSGKVYYDLYDEREKRGIDDVYILRLEQLYPFPTKALITELSR
                     FKQAEMVWCQEEPRNMGAWFFVDTFLQWVLNQIGAKHRTMRYAGRPASASPAVGQMSK
                     HLAQLKQFLEEALG"
BASE COUNT          398 a          701 c          675 g          471 t
ORIGIN      
        1 cgatgggggc aacggcatct cgcgcggctg cggctgctca gggcccgcac cgatcggttt
       61 cgtttttgcg gtcttttcat ccggcgcgcc ggttgggctc gctgccggct tcgtcgcggt
      121 aggcgcggca gccttgggtg cagcgccggc gccttccttg atttgtccga gcagggcgcc
      181 gacggccacc gtatcgccgt tcttcacagc gacttcggac agcacgcccg cggccggtgc
      241 cggcacttcg agcgttacct tgtcggtctc aagctcgacc agtggctcgt ccacggcaac
      301 tgtatcgccc tgctgcttga accacttgcc gaccgtggct tcggtcaccg attcgccaag
      361 tgtcggcacg cggatgtcag ccatgactcc tatccttttc gtcatggccg ggcttatccc
      421 ggccatccac gacttccttg tgacacttcg tcaacgcgtg gatgcccggc acaaggccgg
      481 gcatgacgaa gtgcaattga ttatcccagc gcctcttcga gaaactgttt gagctgcgcc
      541 agatgtttgg acatctgacc cacggcaggc gaagccgagg ccggacgccc cgcatatcgc
      601 atcgtgcgat gcttggcgcc gatctgatta agcacccatt gcaggaacgt atccacgaag
      661 aaccaggcgc ccatgttgcg cggctcctcc tggcaccaca ccatctccgc ctgcttgaag
      721 cgggaaagct cagttatcag cgccttggtc gggaacggat aaagctgctc gagacgaagg
      781 atatagacgt catcgatgcc gcgcttctcg cgctcatcat agagatcgta atacaccttg
      841 cccgagcaca ttatgacgcg gcggattttg tcgtcgggca cgagcttgat ctgctggtcc
      901 ggcaacaatt gcgcatcgtc ccagagcaat cggtggaacg aggtgccgtt ggtcatttcg
      961 tcgagccggg aaacagcgcg cttgtggcga agcagcgatt tcggcgtcat cagaatcagc
     1021 ggcttgcgga tctcgcgctt cagctgccgg cgcaggatgt ggaagtagtt ggcaggagtt
     1081 gtacagttgg cgacctgcat gttgtcttcc gcgcacatct gcagatagcg ctcgagccgc
     1141 gccgacgaat gctccggccc ctgcccctcg tagccgtgcg ggagcaggca aacgaggccc
     1201 gacatgcgca gccatttgcg ctcgcctgaa gagatgaact ggtcgaacac gacctgcgcg
     1261 ccgttggcga agtcgccaaa ctgcgcctcc cacagcgtca gggcgctcgg ctcggcggtg
     1321 gaatagccgt attcgaaacc aagcacggcc tcttccgaga gcatcgaatt gagcacctcg
     1381 aaccgtccct gcgggttgcc gagatgattg aacggcgtgt agcgctcctc ggtgttctga
     1441 tcgaacagca ccgagtgacg ctgcgaaaat gtgccgcgct cgctgtcctg gccggagagg
     1501 cgaacccggt gcccttcttt caacagcgag caaaatgcga gtgcctcgcc ggttgcccaa
     1561 tcaatgccct cgccgctctc gatcgctttt gcgcgggcgt cgagaaatcg ctggattgtc
     1621 cggtgtacgg tgaagccctg cggaaccgtc gttattttct tgccaatgtc acgcagctcc
     1681 gttgcatcga cgccggtatt gccgcggcgc ggatcttcgg cgtcacgcgc ggctttcagg
     1741 cctgaccacc ggccgtcgag ccagtcggcc ttgtttggct tgtagccctg gccggcttcg
     1801 aactcggcgt cgaggcgcct gcgccactcc gccttcatcg tttcgatttc gccttcggtg
     1861 acgacgcctt cgccgatcag tttcttgccg tagatttcaa gcgtactcgg atgcgaccgg
     1921 atcttcttgt acatcagcgg ctgggtgaac gcaggctcgt cgccctcgtt atggccgaac
     1981 cgccggtaac agaacatgtc gatcaccacc ggccgctgga aggtctgccg gtactcggtc
     2041 gccacttttg cggcaaatac aaccgcttcc ggatcgtcac cgtttacgtg caggatcaag
     2101 gcctcgatca tcttggcgac atcggaggga tagggcgatg accgcgaata gcgcggatag
     2161 gtcgtaaacc cgatctggtt gttgacgatg aaatgcagcg acccaccggt gcggtagccc
     2221 ttcagatcgg acaggccgaa gcatt
//
LOCUS       DATDHO010000120         1963 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_54149, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000120 DATDHO010000000
VERSION     DATDHO010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1963
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54149"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..661)
                     /locus_tag="VIY07_02235"
     CDS             complement(206..661)
                     /locus_tag="VIY07_02235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEY6380603.1"
                     /translation="MLRDDINKALTEAMKAKNERAVSTLRMVNSALKNADIEARGAGK
                     PPLGDAEVLSLLQKMIKQRQESVELYQKGGRADLVKQEQEEISIISGYLPKQMSDDEM
                     KAAIEAAVTETAAAGMKDMGKVIGVLRGKYAGQMDMAKASGLVKARLQQ"
     gene            750..1955
                     /gene="carA"
                     /locus_tag="VIY07_02240"
     CDS             750..1955
                     /gene="carA"
                     /locus_tag="VIY07_02240"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEY6380604.1"
                     /translation="MTQPKAAPAGATWAEPRPTALLVLADGTVLEGFGLGATGHAVGE
                     VCFNTAMTGYEEILTDPSYAGQIITFTFPHIGNVGTNEEDIESVNMASRPGACGVILH
                     GAITAPSNYRATKHLNDWLKARGIIGLAGIDTRALTSLIRVNGMPNAVIAHDPKGKFD
                     LAALKKEAKAWPGLVGMDLVPMVTSGQRFTWDEGPWAWGNGYSRQTNPEFHVVAVDYG
                     IKRNILRLLAGSGCKVTVVPAKTSAEDILALKPDGVFLSNGPGDPAATGEYAVPVIKK
                     LIDTGTPTFGICLGHQMLGIAVGGKTVKMHQGHHGANHPVKDLTTGKVEITSMNHGFA
                     VDKDTLPKNVQQTHVSLFDGSNCGLALKDKPVFSVQYHPEASPGPRDSHYLFTRFVEM
                     MRQAKRKIA"
BASE COUNT          370 a          644 c          589 g          360 t
ORIGIN      
        1 tcgctgatgc cgccggcgct cgaggttgtc agcacgtgga tcgggcggct cgggtagtcg
       61 tccccaaagg ctacattcgc aaacagcgaa gcccctgcaa ttgcggccag aaatattctc
      121 atttgccctc cgcaagcctc gatccgtcat cctgaggtgc gagcgaagcg agcctcgaag
      181 ggtgacggaa gagtcgggtg cgacgctatt gttgcagcct cgccttcacc agtccgctcg
      241 ccttggccat gtccatctgc ccggcatatt tgccgcgcag aacgccgatg accttgccca
      301 tgtccttcat accggcagcg gcggtttccg tcaccgcggc ctcgatcgcc gccttcatct
      361 cgtcatcgga catctgcttg ggcagatagc cggagatgat ggagatctcc tcctgctcct
      421 gcttcaccag gtcggcgcgc ccgcctttct ggtaaagctc gaccgattcc tgccgctgct
      481 tgatcatctt ctgcagaagg ctcagcacct cggcgtcccc gagcgggggc ttgccggcgc
      541 cgcgcgcctc gatgtcggca ttcttgagcg cggaattgac cattcgcagg gtcgataccg
      601 cccgctcgtt cttggccttc atcgcctcgg tcaaagcctt gttgatgtcg tcgcgcagca
      661 cggtgacccc tttccttgca gttcacgtgt ttgggggcgg caaccggccg ccccttgcct
      721 ctcactccat aatacgcaag taagaggcca tgacccagcc gaaagccgct cccgcgggcg
      781 caacttgggc cgagcccagg cccaccgcgc ttttggtgct ggcggacgga accgtcctcg
      841 aaggcttcgg actgggggcg accgggcacg cggtcggcga ggtctgcttc aacaccgcga
      901 tgacgggcta cgaggaaatc ctcaccgacc cgtcctatgc cgggcagatc atcaccttca
      961 cgttcccgca tatcggcaac gtcggcacca acgaggaaga catcgaaagt gtgaacatgg
     1021 cgtcgcggcc cggtgcgtgc ggcgtcatat tgcatggcgc gatcaccgcg ccatcgaatt
     1081 atcgcgcgac gaaacatctc aacgactggc tgaaggcgcg cggcatcatc gggctcgccg
     1141 gcatcgacac gcgcgcgctc acctcgctca tccgcgtcaa cggcatgccc aacgccgtga
     1201 tcgcgcatga ccccaagggc aagttcgatc ttgccgcgct gaagaaagag gcgaaggcgt
     1261 ggcccggcct ggtcgggatg gatctggttc cgatggtgac gagcggccag cgcttcacct
     1321 gggacgaagg gccgtgggcc tggggcaacg gttactcccg gcagaccaat ccggaattcc
     1381 acgtggtcgc ggtcgactac ggcatcaagc gcaacatcct gcggctgctc gccggctccg
     1441 gctgcaaagt gaccgtggtg ccggcgaaaa cttccgccga agacatcctg gcactcaagc
     1501 cggatggcgt attcctgtcg aacgggccgg gcgatcctgc agcgaccggc gaatatgcgg
     1561 tgccggtcat caagaaacta atcgatacag gcacgccgac gttcggcatc tgcctcgggc
     1621 atcagatgct cggcatcgcg gtcggcggca agacggtgaa aatgcaccaa ggccatcatg
     1681 gcgccaacca tccggtgaag gatctcacca ccggcaaggt cgagatcacc tcgatgaacc
     1741 acggcttcgc ggtcgacaag gacacgctgc cgaagaatgt ccagcagacg cacgtctcgc
     1801 tgttcgacgg ctccaattgc ggccttgcgc tcaaggacaa gccggtgttc tcggtgcagt
     1861 atcaccccga agcatcacca ggcccgcgcg acagccatta tctcttcacg cgctttgtcg
     1921 aaatgatgcg gcaggcaaag cgcaagattg cgtgagatgc agc
//
LOCUS       DATDHO010000121         2606 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_252998, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000121 DATDHO010000000
VERSION     DATDHO010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_252998"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VIY07_02245"
     CDS             complement(<1..293)
                     /locus_tag="VIY07_02245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380605.1"
                     /translation="MRKSKMIRRAVVVTAVAVALVFTAASFAQQPGRIRGQIEKADGG
                     VLSLKQRDGTMLDVKLADDARVSSLVKASLDDIKKDSFIGVAGMPKPDGSIEA"
     gene            complement(385..1224)
                     /locus_tag="VIY07_02250"
     CDS             complement(385..1224)
                     /locus_tag="VIY07_02250"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEY6380606.1"
                     /translation="MAKNHKAVCVIAWPAGHSRSPLIHNYWIKQHKLDAEYRREAVPP
                     EKFADFVTHLHENGYVGANVTVPHKEPALKLSEPDERARAVGAANALWYGDDRLRSTN
                     TDVEGFLANLDAATPGWDRGLTTAVVLGAGGGARAVIYALLTREVRRIYVINRTKERA
                     QALRKKFGSALQLANWDETTGLLGGAGLLVNTTTLGMEGQPPLELNLRCPPSLVVADI
                     VYAPLETRLLAIARARGLRTADGLGMLLHQAVRGFQLWFGIRPEVTPELRKLVEDDLL
                     KKK"
     gene            1370..2275
                     /locus_tag="VIY07_02255"
     CDS             1370..2275
                     /locus_tag="VIY07_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6380607.1"
                     /translation="MKSIFIDCNDQLAPVWAKVLKPDDPPIDVNRKEFARDELPRIIR
                     GYNIAIDDHSYMPTPLVEQCPELKHIVFLGTGPASYMNVGELNERGIKVHIIKGYGDT
                     AVAEHSIALLWACARDLARMDREVRRGVWTPHEGVQLLGKTLGVIGLGGIGREVARIA
                     KGMGMNVIGWNRTKHPEIDVPLVDIDTLLARADVVSMNLTLGDETRGFLSADRIGRMK
                     KGVIYINTARGALADEAALVAALKSGHIRQAGLDVFHNEPLPPDHALAKLENVTLSAH
                     AAFRTPEASETLLRRAIDIVKTIVA"
     gene            complement(2380..>2606)
                     /locus_tag="VIY07_02260"
     CDS             complement(2380..>2606)
                     /locus_tag="VIY07_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011969288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6380608.1"
                     /translation="VETDRVVTLFQQFAKANNTTPEEARKNSLAKSGARRIGQPDDIA
                     ELALFLARPQARHIQGAAIVVDGGTTTGLY"
BASE COUNT          518 a          808 c          763 g          517 t
ORIGIN      
        1 aatgcttcga tgcttccgtc aggtttcggc atgccggcaa caccgatgaa tgaatctttc
       61 ttgatgtcgt caagtgaagc tttgaccaag cttgaaacgc gtgcgtcatc agcaagcttt
      121 acgtcgagca tggtgccgtc acgttgcttc agcgagagca cgccgccatc ggccttttcg
      181 atctggccgc gaatgcgacc cggctgttgt gcgaatgaag cggctgtgaa aaccagagca
      241 accgccacag ccgttacgac gaccgcgcgt cgtatcatct tcgatttgcg cattaggatg
      301 tcctcccgat ccggttccgg tttggtccgg tcccaatcag gcgtttaacc ccgatatctg
      361 aggcttattc caggcgccga tcactcactt tttcttgagc agatcatctt caacgagctt
      421 gcgcaattcc ggtgtcacct ccggtcgaat gccgaaccaa agctggaaac cacgcacagc
      481 ctgatgcaac agcatgccaa ggccgtcggc ggtacgcagt ccgcgcgcgc gggcgatcgc
      541 caatagcctg gtctcgagcg gggcataaac gatatccgcg acgaccagcg atggcgggca
      601 gcgcaggttg agctccaaag ggggctggcc ttccatgcca agcgtcgtcg tattcaccaa
      661 cagcccggcg ccgcccaaaa ggccggtggt ttcatcccag ttcgcgagct gcagcgccga
      721 accaaacttc ttgcgaagag cctgcgccct ctcctttgtt cggttgatca cgtagatgcg
      781 cctgacttca cgcgtaagca aagcgtagat caccgcgcgc gcgccacctc cggcgccgag
      841 cacaacagcg gtcgtcaggc cgcgatccca gccgggcgtg gcggcatcga gattagcgag
      901 aaacccttcg acatcggtgt tcgtcgagcg cagccggtca tcgccgtacc aaagcgcatt
      961 ggcggcgcct accgcgcgcg cacgctcgtc cggctcggac aattttaggg cgggctcctt
     1021 gtgcggcacc gtgacattcg cccctacata accgttttca tgcagatgcg tgacgaaatc
     1081 ggcaaacttc tcgggcggca ctgcctcgcg ccggtattcg gcatcgagct tatgctgctt
     1141 gatccagtaa ttgtgaatga gcggtgagcg tgaatgcccg gcaggccagg cgatgacaca
     1201 gactgcttta tgatttttgg ccattactcg actacgtttg attgcggcgg cgccgctata
     1261 gtccgcgccg cgccacccgt caacggtcgc ggcgtaaccg ctttcgcgcc attgctctta
     1321 tgaccgcgcc cccttatgga gtgtctgtcc gctttccgga acgatcctca tgaaatccat
     1381 tttcattgat tgcaacgatc aactggcccc ggtttgggca aaagttctca agcccgatga
     1441 cccgccgatc gatgttaacc gcaaggagtt cgcacgggat gaattgccgc gcattatacg
     1501 tggctacaac attgcgatcg acgaccattc atacatgccc acgccgctgg ttgagcagtg
     1561 tccggagctc aaacacatcg tttttctcgg cacggggccg gccagctaca tgaacgtcgg
     1621 cgagctcaac gaacgcggaa tcaaggtcca catcatcaaa ggttatggcg ataccgcggt
     1681 ggctgagcac agcatcgcgc tgctgtgggc ctgcgcgcgc gacctcgccc gaatggatcg
     1741 cgaggtgcgc cgtggcgtct ggacgcctca cgaaggggtc caactcctcg gcaaaacact
     1801 tggcgtgatc gggcttggcg gcattggacg cgaggtggcg cgcatcgcca aaggcatggg
     1861 catgaacgta atcggctgga atcgcaccaa gcacccggaa atcgacgtgc ccctggtcga
     1921 cattgacacg cttctcgctc gcgccgacgt cgtgtcgatg aatctgacgc tcggcgatga
     1981 aacgcgcggc tttctgtcag ccgaccgcat agggcggatg aagaagggcg tcatatacat
     2041 taacacggca cggggagcac tcgccgacga agccgcgctg gtagcagcgc tgaaaagcgg
     2101 tcacattcgg caggcggggc tggacgtctt ccataatgag ccgttgccgc cggatcatgc
     2161 gctggcgaaa cttgagaacg tgacactgtc ggcccatgcg gcattccgca cgccggaggc
     2221 ttccgaaacg ctcctgcgcc gcgcgatcga tatcgtgaag acaatcgtcg cctaatcccc
     2281 gttttggcgg gacgaacggt gaggcagacc gcgcgacagc ccccgttcat tccggcgcaa
     2341 gcgggaatcc agaacgtgtg cgcggcaacc tacgcaattc tagtagagcc ctgtcgtcgt
     2401 gccgccgtcg accacaatgg cggcaccttg aatgtgccgc gcctgtggac gcgccagaaa
     2461 caacgcaagc tcggcgatat cgtcgggctg accaatccgc cgcgcgccgc tcttggcgag
     2521 actgttcttg cgtgcctcct ccggcgtcgt gttgttggcc ttggcgaact gctggaacag
     2581 tgtgacaacg cggtcggtct ccacca
//
LOCUS       DATDHO010000122         2038 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_154002, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000122 DATDHO010000000
VERSION     DATDHO010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154002"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /locus_tag="VIY07_02265"
     CDS             <1..200
                     /locus_tag="VIY07_02265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6380609.1"
                     /translation="IVPDVKEKMFNPFFTTKPTGEGTGLGLSISHDIIVKQHAGSIEV
                     DTQPGEFTEIRVILPRTAVFV"
     gene            483..>2038
                     /locus_tag="VIY07_02270"
     CDS             483..>2038
                     /locus_tag="VIY07_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dehydroadipyl-CoA semialdehyde
                     dehydrogenase"
                     /protein_id="HEY6380610.1"
                     /translation="MNAAPPLESYLAGKWSRGPGVETELIDPTNGTVLATVSARDLDL
                     DGALKFARQKGGPALRALNYSARAKLLGETADVLAANRARYEEIAIANSGNTKTDAAI
                     DIDGGIGTLKYYCRLGASLGEAKLFIDSKPVRLTKAENYQAFHLLTPRHGAAVHINAF
                     NFPSWGLWEKAACALLAGMPLLAKPASATCLLSYQMVRDVVAAGILPEGTLSLLCGGI
                     GDLLDHTTGDDVIAFTGSSYTASQIRGHRNVLARGTMVNVEADSVNAAVLAPSTAPGT
                     PAFDAFIKEVAREMTVKAGQKCTAIRRVLAPADRAGAVADALSARLAKTTLGDPRNEA
                     TRMGPLVNRAQQAGVLQGIGKLASEATIICGGSQAPKLGGIDGSKSAFVSPTLLKVDN
                     ASKAHAAHETEIFGPAATIIPYKDEAESFALVALGGGSLVVSVFGDDPDFLARAVTEL
                     GASNGRVLAVDPSVADGHSGHGIVMPQCHHGGPGRAGNGEELGGLNGLRLYHQRVAVQ
                     GSAALVTAVSA"
BASE COUNT          421 a          603 c          618 g          396 t
ORIGIN      
        1 gcattgtgcc tgacgtgaaa gaaaagatgt tcaacccgtt ttttacgacc aaaccgaccg
       61 gagaaggcac tggtcttggc ctctccatca gccacgacat cattgtcaag caacatgcgg
      121 gttcaatcga ggtcgatacg cagccgggcg aattcaccga aatcagggtt attctgcccc
      181 gcactgctgt gttcgtttga aacccccaca ccgcacctga atgtccgcta ttggccctta
      241 gcagacatta gctgttgcac cgcacatgtc cgctttcggg ggtaaagcgg acgtggcaat
      301 tgcactgcga aatgtccgtt ttcacccaaa ccggacgttc actgtctgcc gagctgagac
      361 gaattgataa tggaagccaa cctcccaccg ccgaaatata attcgcatcc agcggctggc
      421 ctggatttgg tgatcatcgc tatgatgcca acaacaacaa atcacgctct gaggttacgt
      481 cgatgaatgc tgcgccacct ctggaaagtt atctcgctgg taaatggtcc cgtgggccgg
      541 gcgttgaaac ggagctaatc gatccgacga atgggacggt gctggcgaca gtcagcgcgc
      601 gtgatcttga cctggacggc gcattgaaat tcgcgcgtca aaaaggcggg cctgcgctgc
      661 gcgcactcaa ttacagcgcg cgcgcaaagc tgcttggcga gacggcggat gtgctagcag
      721 caaaccgcgc gcgctatgaa gaaattgcga tcgccaactc aggcaacacg aagaccgatg
      781 cggcgatcga catcgatggc ggtatcggca cgctgaaata ttattgccgg ctcggcgcat
      841 cgctgggcga agcaaaatta ttcatcgaca gcaaaccggt gcgcctcacc aaagctgaaa
      901 attatcaggc gttccacctg ttgacgccgc ggcacggcgc ggccgtacac atcaacgcct
      961 tcaatttccc gagctgggga ctgtgggaaa aggcggcctg cgccctgctt gccggcatgc
     1021 ctttgctggc aaagccggca tcggcgacgt gcctgctcag ctatcagatg gtgcgtgatg
     1081 tggtcgcggc gggaattttg ccggaaggta cgctcagcct gctgtgcggc ggtatcggcg
     1141 acttgcttga ccataccact ggcgacgatg tcatcgcgtt caccggctca tcctacaccg
     1201 cgagccagat tcgcggtcac cgaaatgtcc tggcgcgcgg aacaatggtg aatgtagagg
     1261 ctgatagtgt gaatgccgcg gtgctcgcgc cgtcgaccgc gccgggcacg ccggcattcg
     1321 atgcttttat caaggaagtc gcgcgcgaaa tgaccgtgaa ggcggggcag aaatgcaccg
     1381 cgatccgtcg cgtgctcgca cctgccgatc gcgccggcgc ggtcgccgac gcgttgtcgg
     1441 cacggcttgc caagaccacg ctcggcgatc ctcggaatga agcaacgcgc atggggccgc
     1501 tggtcaatcg cgcccaacag gccggcgtac tgcagggcat cggcaaactt gcaagcgagg
     1561 ccacaatcat ctgtggcggc tcgcaggcgc cgaagctcgg gggtatcgat ggctccaaat
     1621 cggccttcgt ctcgccgacc ttgctaaagg tcgataatgc atcgaaagcg cacgcagcgc
     1681 atgagaccga gatcttcggg cctgcggcga caatcattcc ttacaaggac gaagcggagt
     1741 cgttcgcgct cgtcgcgctc ggcggtggat cgctggttgt gtctgtgttc ggcgacgatc
     1801 cagacttcct tgcacgtgcg gtgaccgaac ttggcgcatc caatggccgt gtgctggcgg
     1861 tcgatccgtc cgtcgccgat ggacacagcg ggcacggcat tgtcatgccg caatgtcatc
     1921 acggcggacc aggtcgagct ggcaatggcg aggagcttgg cggtctcaac ggcctgcggc
     1981 tttatcacca gcgcgtcgcg gtgcaaggct cggccgctct cgtcaccgcc gtatcggc
//
LOCUS       DATDHO010000123         4705 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_54321, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000123 DATDHO010000000
VERSION     DATDHO010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4705)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4705)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4705
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54321"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..1430
                     /locus_tag="VIY07_02275"
     CDS             78..1430
                     /locus_tag="VIY07_02275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380611.1"
                     /translation="MHALFDTVSQAVQTSKSDVLTPSNAPSNEPTAPAARVAAAPVAP
                     PAPASVGQSSTQTQASLSSPAQPTGQEPGSVRTTFRGVTDNEIRFGISAALSGPTKEL
                     GQNMNRGIVAAFNVANANGGVHGRQLRLIAADDGYEPARAAETMKQLYEKEQVFGIIG
                     NVGTPTATVALPYALERKMLFFGAFTGAGLLRNDPPDRYVFNYRASYAEETSAMVHYL
                     VKVKRLKPSQIAVFAQQDSYGDSGFVGVTKAVRALGGDDNAVLRLHYQRNTVDVDDAV
                     EQLKKSRVPIRAVIMVPAYRAAAKFIEKTKDLFPGMIYTSVSFVGSTALANELMLLGK
                     RFANGVIVTQVVPALDGHSSLVIEYKNALAKYFPGEAPDYVSLEGYVAANVLIAALKQ
                     NGPQLDTERLVATLENLRDLDIGLGTPVTFSRSEHQGVHKVWATQLDENGRYQAIDLQ
                     "
     gene            complement(1478..2725)
                     /locus_tag="VIY07_02280"
     CDS             complement(1478..2725)
                     /locus_tag="VIY07_02280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380612.1"
                     /translation="MIEAIMYFGIGFLFASLIGVAVAPLIHDRAVRLTMRRLENSIPQ
                     SMAEIQADKDLLRAEFAMSTRRLEIGVDELKEQNTNQLAELSRRSDVINRLKLEREAH
                     KVETFALKSEVQSLKERLHSIGKRMKESEFQRGEPDVASLVPNEWPRTEPQGTSTNSA
                     GLYEQRPEREVLSLVVDRPVPEAAPPARVPDFARHAVGMAEDATGSGAMRPQSSIHVS
                     ADDQVAHESVSGGRISRNLRSVSVVALFGVGAALAWLQFGGEAKKAVGALTSPLTPEK
                     ATSARQPSDVNSAEVTRQIDALARDLADVRTNVEQSTAKQEQTKHDAPAAVEPDDKQK
                     LALTEPQDRARQTPYPDTKPTTIAGWALVEVVGGTAVVQGPSGVWRVTRGDTVPGIGK
                     VDSIVRWGNRWIVATSSGLISTP"
     gene            2975..3259
                     /locus_tag="VIY07_02285"
     CDS             2975..3259
                     /locus_tag="VIY07_02285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380613.1"
                     /translation="MLKERIHALADGARAGRRSDDMPAQGEDDPAKRAVVHEWENWAA
                     LNSDDLQSPKVMIFFLDHLQSKKPVLLNFDCEDKYQRIRDWLVREGRLAD"
     gene            complement(3555..3788)
                     /locus_tag="VIY07_02290"
     CDS             complement(3555..3788)
                     /locus_tag="VIY07_02290"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380614.1"
                     /translation="MTADKDIPPLIELLKMAADQWPSSETGEVSQSELFRRDQALLDM
                     WPEACRRAGAGEREFPPGVIKLWQFEMSRGRAN"
     gene            complement(3942..4472)
                     /locus_tag="VIY07_02295"
     CDS             complement(3942..4472)
                     /locus_tag="VIY07_02295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEY6380615.1"
                     /translation="MAIYKLDGQAPEFPPEGQFYIAESAAVIGRVRLKAEASVWFGAV
                     VRGDNEWIEVGERSQVQDNATLHTDPGFPMTIGSDCVIGHNVILHGCTIGDNSLIGMG
                     AILLNGVKIGKNSLVGAGSVVTEGKSFPDNSLIMGTPARAIRVLDERAISMIRDGADI
                     YVKRWKRYAKGLLRIG"
BASE COUNT          986 a         1390 c         1333 g          996 t
ORIGIN      
        1 gccggatagc attagtcgtc acatttgcgg ccgtcgtcgc actcatgctc attttcgcaa
       61 agccaatatc ggaaggcgtg cacgcgctgt tcgacacagt ttcgcaagca gtccaaacat
      121 ctaaatctga tgtgctgacc ccgagtaacg cgccgtcgaa tgaaccgacc gctccggccg
      181 cgcgggttgc agcggcccct gttgcgccgc cagcaccggc ttccgttggt cagtcttcca
      241 cacagacgca agcgtcgctt tcgtcgcccg cccagccaac cgggcaagaa ccaggcagcg
      301 tcaggactac ctttcgcggc gtaaccgaca acgaaattcg gtttgggatt tccgcggcac
      361 tgagtggtcc gaccaaggaa ctcggccaga atatgaaccg gggcatcgtg gcggcgttca
      421 acgtggccaa cgccaatggc ggggtgcacg gccggcagct ccgcctcatc gccgcagacg
      481 acggttatga gcctgctcga gcggccgaaa caatgaagca gctctatgag aaagaacaag
      541 tttttggaat catcggcaat gtaggaacac ccacagcgac agtggcattg ccatacgctc
      601 tagagcgcaa gatgctgttt ttcggtgcgt tcaccggcgc cggtctgctc agaaatgatc
      661 cgccagatcg atatgtcttt aactaccgag ccagttacgc tgaagagacc agcgcaatgg
      721 tgcactatct ggtgaaggtg aagcggctga agccgagcca gattgcggtc tttgcccagc
      781 aggactcgta tggcgactcg ggctttgtcg gcgtgacaaa ggctgttcgc gcgctgggcg
      841 gcgatgacaa cgcggtcttg cgcctccatt accagcgcaa caccgtcgac gtggacgacg
      901 ctgtcgagca actcaaaaag agccgtgttc ccataagagc ggtgatcatg gtgcccgcct
      961 atcgggccgc ggctaaattc attgagaaga cgaaagatct tttcccgggc atgatctaca
     1021 ccagtgtttc gttcgtgggt agcaccgcgc tggcgaacga gctgatgctg ttgggcaaga
     1081 gattcgcaaa tggagtgatc gtgacgcagg tcgtccctgc gcttgatggc cactcttcgt
     1141 tggtgatcga atacaaaaat gcgctcgcca aatacttccc gggagaggcg ccggattatg
     1201 tgtctctcga aggttacgtg gcggccaacg tgttgattgc agcgttgaaa cagaatggtc
     1261 ctcagctcga caccgaaaga ctggtggcaa ccctcgagaa cctccgcgac ctcgatattg
     1321 ggctcggcac acccgtgact ttcagccgat ccgagcatca gggtgtgcac aaggtgtggg
     1381 cgacgcagct cgacgaaaac ggccgttatc aagccatcga cctgcaatag cgtaggcagg
     1441 aataagcgca taggtcggcc cgtcacaagc gggcgaccta tggcgttgag atcagcccgc
     1501 tgctggtcgc aacgatccag cgattgcccc agcgaacaat agaatcaacc tttcctattc
     1561 ctggcactgt atcgccgcgc gttacgcgcc agactccact tggcccctgg acgactgccg
     1621 tgccgccaac aacttcaaca agcgcccacc cggcaatggt cgttggtttt gtgtcgggat
     1681 aaggggtctg tcttgcgcgg tcctggggct ccgttaatgc caatttctgc ttgtcatccg
     1741 gttcgaccgc tgccggcgca tcgtgttttg tctgctcttg tttggcggtg gattgctcaa
     1801 cattggttcg cacatcggcg agatcgcggg ccagggcatc aatttgccgc gtcacttcag
     1861 cagaattcac gtccgagggc tggcgagcgg aggtggcttt ctccggcgtc aagggtgatg
     1921 tcaaagcgcc gactgccttc ttggcttcgc cgccaaactg gagccaagcc agggcggcgc
     1981 ccacaccaaa cagagccact acggaaacgc tccgaagatt acgtgatatc cgtccgccgc
     2041 tcactgactc atgcgcaacc tgatcgtccg ccgacacatg tatggaggac tgcggccgca
     2101 tcgcaccaga accggttgcg tcctcagcca tccccacggc atgacgtgca aaatccggaa
     2161 cgcgcgccgg tggggccgct tcaggcaccg gtcggtcgac aaccagcgac aatacttcac
     2221 gctcggggcg ctgctcatac agccctgctg aatttgttga agtcccttgc ggttcagttc
     2281 gtggccactc attggggaca agggaagcga catcgggctc accgcgttgg aattcagact
     2341 ccttcatcct ttttccaatg gagtgaagcc tctccttgag cgactgaact tcgcttttaa
     2401 gcgcgaacgt ctcgaccttg tgtgcttcgc gctcaagctt gagacgattt atgacgtcgc
     2461 tccttctgct gagttcggca agctggttgg tgttctgctc cttgagctcg tcgaccccga
     2521 tctcaagccg ccgggtcgac atcgcgaact cggcgcgcag cagatccttg tcggcttgaa
     2581 tttccgccat cgactgcgga atggagtttt ccagccgtcg catggtcagc cgcaccgcgc
     2641 ggtcatgaat aagcggggcg actgcgaccc caatgaggga tgcaaagaga aagccgatcc
     2701 cgaaatacat gatggcttcg atcattggcg cactcaacaa gacgcggggt acaccgctgg
     2761 gaaccgcaat tgtaccaagc gatcctcatc cttggccggc atctggatac cgcatcgact
     2821 tgtggatcga tttttcggca agcgagcccg aagtcccgct cgaacgatcg gccgcgcgta
     2881 gaaagttgtg ttgaaacgct gcgcgctcgc ccagctctgt cgcaaagatg acgtttggaa
     2941 ggtaagaaat cgttaattgc ggggtcatga catcgtgctg aaggaacgca ttcacgccct
     3001 ggcagatggc gctcgagccg gacgcaggag cgatgacatg ccggcacaag gcgaagacga
     3061 ccccgccaaa cgagcggtcg ttcacgaatg ggaaaattgg gccgcattga attcggatga
     3121 tttgcaaagt cccaaggtca tgatcttttt tctggatcat ttgcagagca aaaaacctgt
     3181 gcttcttaac ttcgattgtg aggacaaata tcaaaggatc cgcgactggc ttgttcgaga
     3241 aggccgtctc gcggattgaa aatcgcattc tccatcgtcc ggatgacgat gccggtgtct
     3301 gggcctcgct tgtttgcgac cttgctagat ttttgtgaaa ttcttgcgca aaggtatgtc
     3361 gctgcccctg atcattcgcc ggataccgct atctaggtcg gcgatgtgga gtgtcatatc
     3421 cggctcggcg ccagactctc cagatcaact tctgcgtgtt ggcctgacct acaagtttcg
     3481 ctcatactca cgacgatgcg caggtgcccc ggcaaacttg ccgggggctt tttttgtgca
     3541 gatcgctcgg tggctcaatt tgcccgacct ctgctcatct caaattgcca aagtttgatc
     3601 actcccggcg ggaactcacg ctcgccagcg ccggcgcgcc ggcaggcctc gggccacata
     3661 tcaagcaagg cttgatcgcg gcggaacagt tcgctttgcg acacctcacc ggtctcagaa
     3721 ctcggccatt ggtcggcagc cattttcagc agctctatca ggggaggtat gtctttgtcg
     3781 gctgtcatcg ttagccccca tcgttgttca cgatgatgag gatacggacg cggaggcaaa
     3841 gcgcagtgtt agccgtcaca aaaagacgca atttggcgga gctggatgtg tacggtatca
     3901 tgctaccccc ctttctctac agtacgcgct ccttgcttgg ttcagccgat ccgcagcagg
     3961 cctttggcgt atcgcttcca gcgcttcacg tagatgtcgg caccgtcgcg gatcatcgat
     4021 atggcccttt cgtcaaggac gcgaatggcg cgtgccggcg tgcccatgat cagcgaattg
     4081 tccggaaaac tcttgccttc cgtgaccacg cttccggcgc ccacgagaga gttttttccg
     4141 attttcacgc cattgagcag gatggcgccc atcccgatca atgaattgtc gccgattgtg
     4201 cacccatgca ggatcacgtt gtgcccgatc acgcaatcgc tgccgatcgt catcggaaat
     4261 cccggatcgg tgtgcaacgt ggcattgtcc tggacctgcg agcgctcgcc cacctcgatc
     4321 cattcgttat cgccgcgcac gacagcgcca aaccagacgc tcgcctcggc tttgagccgc
     4381 acgcgcccta tcaccgccgc cgattcggcg atgtagaact gaccctctgg aggaaattcc
     4441 ggcgcctgtc cgtcaagctt atagatcgcc attcacacct cccaaggcgc gcgaacttgc
     4501 ctcaacggaa cgcgggagga aagtcttcag gcgtgcagga aaccgcagac ctgcaaggtc
     4561 atcacgagga ccaggcctga catcaggctc caaaagccgg cgatcagcgt cgccaggaaa
     4621 acaaattcga agcgacggcc ctcgcgctgg ctgcccagaa tggtgttgcg cattatcaag
     4681 aatggcgccg tgacgaccaa cagcg
//
LOCUS       DATDHO010000124         7886 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_54405, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000124 DATDHO010000000
VERSION     DATDHO010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7886
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_54405"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2598)
                     /gene="rpoC"
                     /locus_tag="VIY07_02300"
     CDS             complement(<1..2598)
                     /gene="rpoC"
                     /locus_tag="VIY07_02300"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEY6380616.1"
                     /translation="MNQEIMNLFSPQVPAQVFDQIRISIASPEKILSWSYGEIKKPET
                     INYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRER
                     MGHIELAAPVAHIWFLKSLPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTPLKDRQL
                     LSEDEYLKAQEEYGSDSFTAMIGAEAIREMLKAIDLDKMQGELRAELAESDSDIKKKK
                     IAKRLKLIEAFIASGNKPEWMILTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLIELRAPDIIIRNEKRMLQEAVDALFDNGRRGRVITGANKRPLKSLADMLK
                     GKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHQCGLPKKMALELFKPFIYSRLDAKGL
                     STTVKQAKKLVEKEKPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILHPANGSPIIVPSQDI
                     VLGLYYLSLMRDGEPGQGKVFGDLADIDHALHEKVIGLHSKIKYRWEGIDDKGKTFKK
                     WYDTTPGRVVLGSVLPKSAKVPFDIVNRLMTKREISSMIDTVYRHCGQKETVIFCDRI
                     MALGFYHAFKAGISFGKDDMVVPESKWKTVEETRELAKEFEQQYNDGLITQGEKYNKV
                     VDAWSKCTEAIADAMMKEISSSKKDPGGREAQVNSIYMMAHSGARGSPAQMRQLAGMR
                     GLMAKPSGEIIESPIISNFKEGLSVLEYFNSTHGARKGLADTALKTANSGYLTRRLVD
                     VAQDCIITEDDCGTKSGIKVRAIIDAGTVVASLASRILGRTTAEDVKDPSSSKTLVKR
                     STLLQEPEVE"
     gene            complement(2740..6861)
                     /gene="rpoB"
                     /locus_tag="VIY07_02305"
     CDS             complement(2740..6861)
                     /gene="rpoB"
                     /locus_tag="VIY07_02305"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEY6380617.1"
                     /translation="MAQTFTGRKRVRKFFGTINEVAEMPNLIEVQKASYDQFLLVKEP
                     VGGRPDEGLQAVFKSVFPISDFSNSSQLEFVKYEFEPPKYDVDECRQRGMTYAAPLKV
                     TLRLIVFDIDEETGARSVKDIKEQDVYMGDIPLMTNNGTFIVNGTERVIVSQMHRSPG
                     VFFDHDKGKTHSSGKLLFAARIIPYRGSWLDIEYDAKDIVYARIDRRRKIPVTSLLYA
                     LGLDGEQILSTFYKHVNYKRAKDGWRVPFDANRLRGYKAVNDLVDADTGRVVVEAGKK
                     LTVRQARQLAEKGLKALRMTDDELIGHYVAEDLANGRTGEIYMEAGDEITEKNLKILI
                     EAGYKELPLLDIDHVNVGAYIRNTLAVDKNMTREDALFDIYRVMRPGEPPTVETAEAM
                     FRSLFFDPERYDLSAVGRVKMNMRLDLDAPDTVRVLRRDDIISVIRTLVDLRDGKGEI
                     DDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAA
                     AVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRI
                     CPIETPEGPNIGLINSLATYARVNKYGFVETPYRKVKDGRVTDEVVYLSAMEEARHAV
                     AQANSPIDNRGRFTEDLIVCRQAGDVHLVPRDKVDFMDVSPKQLVSVAAALIPFLEND
                     DANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVARDSGASIAARRTGIVDQVDATRI
                     VVRATDETDPTKPGVDIYRLMKYQRSNQNTCINQRPLVKVGDRVDKGDIIADGPSTDL
                     GELALGRNVLVAFMPWNGYNFEDSILLSERIVKDDVFTSIHIEEFEVMARDTKLGPEE
                     ITRDIPNVSEEALKNLDEAGIVYIGAEVHAGDILVGKITPKGESPMTPEEKLLRAIFG
                     EKASDVRDTSLRVPPGVQGTVVEVRVFNRHGVEKDERALAIEREEIERLAKDRDDEQA
                     ILDRNVYGRLAEMLEGRTGIAGPKGFKKDSKITKAVLDEYPRSQWWLFASPNDKLMAE
                     IEAIRKQYDESKKLLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAG
                     RHGNKGVVSKIVPAEDMPFLEDGTPVDIVLNPLGVPSRMNVGQILETHLGWACAGLGL
                     KIGQAVDAYNSKHDSRPLKDMLKKVYGDDETIKSLNEDGLIELGGNLRHGVPIATPVF
                     DGAKEADIEKMLDLAGLDHSGQVTVFDGRTGEPFDRKVTVGFIYMLKLHHLVDDKIHA
                     RSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTK
                     VYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKQQRQGPETAEAAE"
     gene            complement(7223..7603)
                     /gene="rplL"
                     /locus_tag="VIY07_02310"
     CDS             complement(7223..7603)
                     /gene="rplL"
                     /locus_tag="VIY07_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEY6380618.1"
                     /translation="MADLQKIVEDLSSLTVLEAADLAKMLEEKWGVSAAAAVAVAAGP
                     AAGGAAAAAAEEKTEFTVVLASAGEKKIEVIKEVRALTGLGLKEAKDLVEGAPKNIKE
                     GVAKDEANKIKATLEKVGAKVELK"
     gene            complement(7651..>7886)
                     /locus_tag="VIY07_02315"
     CDS             complement(7651..>7886)
                     /locus_tag="VIY07_02315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEY6380619.1"
                     /translation="FAKANAKFIILGGSMGKTALDTNGVKALAALPSLDELRAKIIGL
                     IQAPATKIAQLANAPAAKLARVIQAYASKDAAG"
BASE COUNT         1377 a         2455 c         2334 g         1720 t
ORIGIN      
        1 ctcgacttca ggctcctgca gcagcgtgct gcgtttgacc agcgtcttgc tgctggacgg
       61 atccttcaca tcctctgccg tcgtccggcc gagaatgcgg ctggccagcg atgcaaccac
      121 cgtgccggcg tcgatgatcg cgcgcacctt gatgccgctc ttcgtgccgc agtcatcttc
      181 cgtgatgatg cagtcctgcg ccacatcgac caggcgccgt gtcagatagc ctgagttggc
      241 tgtcttgagc gccgtgtctg ccagaccctt gcgggcaccg tgcgtcgagt tgaagtactc
      301 gagcaccgag aggccctcct tgaagttgga gatgatcggg ctctcgatga tttcgcccga
      361 cggcttcgcc atcaggccgc gcatgcccgc aagctgacgc atctgcgcgg gcgagccgcg
      421 tgcgccggaa tgggccatca tgtagatcga attgacctgc gcctcgcgtc cgccgggatc
      481 tttcttcgag gacgaaatct ccttcatcat cgcatcggcg atcgcttcgg tgcatttcga
      541 ccaggcatcg accaccttgt tgtatttttc gccctgggtg atgaggccgt cgttgtattg
      601 ctgctcgaac tctttggcga gctcacgcgt ctcctcgacg gttttccact tcgattccgg
      661 caccaccatg tcgtccttgc cgaacgagat accggccttg aaggcgtgat agaacccgag
      721 cgccatgatg cggtcgcaga aaataacggt ctctttctgc ccgcagtggc gatagacggt
      781 atcgatcatc gacgagatct cgcgcttggt catcaagcgg ttgacgatgt cgaacggaac
      841 cttcgcgctt ttcggcagca cactgccgag cacgacgcgt cccggcgtcg tgtcgtacca
      901 tttcttgaag gtcttgcctt tgtcgtcgat gccttcccag cggtatttga tcttgctgtg
      961 caggccgatc accttttcat gcaatgcatg atcgatgtcc gcgagatcgc cgaacacctt
     1021 tccttggccg ggctcgccgt cacgcatcag cgagagatag tagaggccga gcacgatgtc
     1081 ctgcgacggc acgatgatgg gcgagccgtt cgccgggtga aggatattgt tggtggacat
     1141 catgagcacg cgcgcttcca gctgcgcctc gagggacagc ggaacgtgca cggccatctg
     1201 gtcgccgtcg aaatcggcat tgaacgcggc gcagacaagc gggtgaagct ggatcgcctt
     1261 gccctcgatc aggaccggct caaacgcctg gatgccgagc cggtgcaggg tcggcgcgcg
     1321 gttgagcagc accggatgct cgcggatcac ctcgtcgagg atgtcccaga cctccggctt
     1381 ctccttctcg accagtttct tcgcctgctt tactgtggtc gatagaccct tggcatcaag
     1441 ccgcgagtaa atgaaaggct tgaagagctc gagggccatc ttctttggca agccgcactg
     1501 atgcagcttg agctcgggac ccacaacgat caccgaacgg cctgaatagt cgacgcgctt
     1561 gccgagcagg ttttgccgga aacgtccttg tttgcccttc agcatgtcgg ccagcgactt
     1621 gagcggacgc ttgttggcgc cggtgatgac gcggccgcgg cggccgttgt cgaacagcgc
     1681 atcgacagct tcctgcagca tgcgcttttc gttgcggatg atgatgtccg gcgcacggag
     1741 ctcgatcagc cgcttcagac ggttattgcg gttgatgacg cgacgataga gatcgttgag
     1801 gtcggacgtc gcaaatcggc cgccatcgag cggcacgagc ggccgcagat ccggcgggat
     1861 gaccggcacg acggtcagga tcatccactc cggcttgttg cccgaggcga tgaaggcctc
     1921 gatcagcttg agccgttttg caatcttctt cttcttgatg tcgctgtcgg attccgcgag
     1981 ctcggcgcgc aattcgccct gcatcttgtc gaggtcgatt gccttgagca tctcacggat
     2041 cgcttccgcc ccgatcatcg cggtgaagct gtccgaccca tattcctcct gcgccttcag
     2101 atattcgtcc tcggacagga gctggcgatc cttgagcggc gtgagcccgg gctcaaggac
     2161 gacgtaatat tcgaagtaca ggatgcgctc gagatccttg agcgtcatgt cgagcagcaa
     2221 gccgatgcgg ctcggcagcg acttcaaaaa ccagatgtgc gcaacgggcg cggccaattc
     2281 gatatggccc atgcgctcgc gccgcacacg cgacagcgtc acctcgactg agcacttctc
     2341 gcagataatg cccttgtact tcatgcgctt gtacttgccg cacaagcatt cgtaatcctt
     2401 gatgggcccg aagatccgcg cgcagaacaa gccgtcgcgc tcgggcttga aggtacgata
     2461 gttgatcgtt tccggctttt tgatctcgcc gtaggaccag gacagaatct tttcggggct
     2521 cgcgatcgaa atccggatct ggtcgaagac ctgagccgga acctgcgggc tgaaaagatt
     2581 catgatctct tgattcattg tgttctccgc ttgccgacca tatcggccgc taatcctttt
     2641 tcgcctcgtc atggccgggt ttatcccggc catctcgctt aggaaggctc tgcccttccg
     2701 atcgggatgc gcgggtcaag cccgcgcatg acagtcctgt tactccgccg cctcggccgt
     2761 ctccggcccc tggcgctgtt gcttcgaatt gtgcagatcg acgttcaaac cgagcgaacg
     2821 catctccttg accagcacgt tgaagctttc cggaataccg gcctcgaatg tgtcgtcgcc
     2881 gcgaacgatc gcctcgtaca ccttggtgcg gccggcaacg tcgtccgact tgacggtcag
     2941 catctcctgc aaggtgtagg cagcaccgta ggcttcgagc gcccacactt ccatttcgcc
     3001 gaagcgctgg ccgccgaact gcgccttgcc gccgagtggc tgctgggtaa ccagcgagta
     3061 cgggccaatc gaccgtgcgt ggatcttgtc gtccaccagg tggtgcagct tcagcatgta
     3121 gatgaagcct accgtcacct tgcgatcgaa cggctcgccg gtccggccgt cgaacacggt
     3181 gacctgcccg gaatgatcga ggcccgcgag atcgagcatc ttctcgatgt cggcctcctt
     3241 cgcgccgtcg aacacgggcg ttgcaatggg gacgccatgt cgcaggttgc cgccgagctc
     3301 gatgagaccg tcctcgttca gagacttgat ggtctcgtcg tcgccataga ctttcttgag
     3361 catgtccttg agcggccgcg agtcgtgttt cgaattgtaa gcatcgacag cctggccgat
     3421 cttgagccca aggccggcac aagcccagcc gagatgcgtc tcgagaatct gaccgacgtt
     3481 catccggctc ggcacgccga gcggattgag tacgatgtcg accggggtgc catcctccag
     3541 gaaaggcata tcctcggcag gcacgatctt agaaacgacg cccttgttgc cgtgacgacc
     3601 ggccatcttg tcgccgggct ggatcttgcg tttcacggcg acgaagacct tcaccatctt
     3661 catcacgccg ggcggaagct cgtcgccgcg ctgcagcttc tcgaccttgt cgaggaagcg
     3721 ctgctcgagc agcttcttcg actcatcgta ctgtttgcga atggcctcga tctccgccat
     3781 cagcttgtcg ttgggcgaag cgaacagcca ccattgcgag cgtggatact cgtccagtac
     3841 cgccttggtg atcttggagt ctttcttgaa gcccttggga ccggcgatgc ccgtacgccc
     3901 ttcgagcatc tcggcaagac ggccgtagac gttacggtcg aggatagcct gctcgtcatc
     3961 acggtctttc gccagccgct cgatttcttc acgctcgatc gcgagcgcac gctcgtcttt
     4021 ttcaacgccg tgtctgttga acacgcgcac ttcaacgacc gtgccctgca cccccggcgg
     4081 cactcgcagc gaggtgtcgc gcacatcgga ggccttctcg ccgaagattg ctcgcagcag
     4141 cttttcttcc ggcgtcatcg ggctttcgcc cttcggcgtg atcttgccga ccaggatgtc
     4201 gcccgcgtgc acttcggcac cgatgtagac gataccggct tcgtcgaggt tcttgagcgc
     4261 ctcttccgaa acgttcggga tatcgcgggt gatttcttct ggaccaagct ttgtgtcgcg
     4321 cgccatcacc tcgaattcct cgatgtggat ggacgtgaac acgtcgtcct tcacgatccg
     4381 ctccgagagc agaatcgaat cctcgaagtt gtagccattc cagggcatga acgcgaccag
     4441 cacgttgcgc ccaagcgcga gttcgccgag gtccgtagac gggccatcgg caataatgtc
     4501 gcccttgtcg acgcgatcac ccaccttcac cagcggacgc tggttgatgc aggtgttctg
     4561 gttcgagcgc tgatatttca tcagccgata aatatcgacg cccggtttcg tggggtctgt
     4621 ctcatcggtc gcgcggacaa cgatacgggt ggcgtccacc tgatcgacga taccggtgcg
     4681 acgcgccgcg atcgatgcgc cggagtcgcg agcgactacg ccttccatgc cggttccgac
     4741 gaacggcgcc tcggcccgca caagcgggac tgcctgacgc tgcatgttgg aacccatcag
     4801 cgcgcggttg gcgtcgtcgt tttcaaggaa cggaatcaac gccgcggcca ccgagaccag
     4861 ttgcttcggc gacacgtcca tgaagtccac cttgtcgcgc ggcacgaggt gcacgtcgcc
     4921 tgcctggcgg caaacgatca ggtcctcggt aaagcggcca cggttgtcga tcggcgagtt
     4981 cgcctgcgcg accgcatggc gggcctcctc catcgcggag agatagacca cctcgtcggt
     5041 gacgcgaccg tccttgacct tgcgatacgg cgtttcgaca aagccgtatt tgttcacgcg
     5101 cgcataagtg gcgagtgaat tgataagtcc gatgtttggc ccttccggcg tttcgatcgg
     5161 gcagatgcgc ccgtaatgcg tcgggtgcac gtcgcgcacc tcgaagccgg cccgttcgcg
     5221 ggtcagacca cccgggccaa gcgccgaaag acggcgtttg tgggtgatct cggacaacgg
     5281 attggtctgg tccatgaact gcgacagctg cgaggagccg aagaattccc ggaccgcggc
     5341 ggctgccggc ttggcgttga tcaggtcttg cggcatcacg gtgtcgatat ccaccgacga
     5401 catgcgctcc ttgatcgcgc gctccatacg cagcaatccg atgcgatact ggttctccat
     5461 cagctcgccg accgagcgca cccgacggtt gccaagatga tcgatgtcgt cgatctcgcc
     5521 cttgccgtcg cgcagatcga ccaatgtccg gatgaccgag atgatgtcgt ccctgcggag
     5581 gacacgcacg gtgtcgggcg catcgagatc aagccgcatg ttcatcttca cgcggccaac
     5641 ggccgacagg tcgtagcgct cggggtcgaa gaacagcgag cggaacatcg cttcggcggt
     5701 ctcgaccgtc ggcggctcgc ctgggcgcat gacgcgatag atgtcgaaca acgcgtcctc
     5761 gcgcgtcatg ttcttgtcga ccgcaagtgt gttgcgaatg tatgcaccga cgttcacgtg
     5821 gtcgatatcg agcagcggca attccttgta gccagcctcg atgagaatct tgagattctt
     5881 ctcggtgatt tcgtcgccgg cttccatgta gatttcgccg gtgcggccat tggcgagatc
     5941 ctcggccacg taatgtccga tcaactcgtc atcggtcatg cgcagggcct tgagaccctt
     6001 ctcggcgagt tggcgcgcct gacggacagt cagtttcttg ccggcttcga cgacaacccg
     6061 gccggtgtcg gcgtcgacga gatcgttgac agccttgtaa cccctgagac ggttggcatc
     6121 gaacggcacg cgccacccat ccttggcgcg cttatagttc acatgcttgt agaatgttga
     6181 caggatctgc tcgccgtcga gcccgagggc gtaaagcagc gacgtcaccg gaatcttgcg
     6241 acggcggtcg atgcgcgcgt agacgatgtc cttggcgtcg tactcgatgt cgagccagga
     6301 accgcgatac gggatgatgc gggccgcgaa caggagcttg cccgaggaat gggtcttgcc
     6361 cttgtcgtgg tcaaaaaaga cgcccggcga gcgatgcatc tgcgaaacga tgacgcgttc
     6421 ggtgccattg acgatgaacg tgccgttgtt ggtcatgagc ggaatgtcgc ccatgtagac
     6481 atcctgctcc ttgatgtcct tgaccgagcg cgcgcccgtc tcttcgtcga tgtcgaacac
     6541 gatcagccgc agggtgacct tgagcggtgc ggcgtacgtc atgccgcgct ggcggcattc
     6601 gtcgacgtca tacttcggcg gctcgaattc gtacttcacg aattcgagct gtgatgaatt
     6661 ggagaagtcg gaaatcggga ataccgattt gaatacggcc tgcaggccct cgtcgggacg
     6721 gccgccgacc ggctccttca cgagcaggaa ctggtcgtac gatgccttct gaacctcgat
     6781 gaggttcggc atctccgcca cttcgttgat tgtcccgaaa aacttcctta cgcgcttgcg
     6841 accggtaaac gtctgcgcca tcttttctct ctcgattcga ttgcaccggg cggcgcgggc
     6901 gcctctccga acagccgcat tccatcgcga ccatcgggac aggcgccggg gccgtccgct
     6961 tctatgcgat tcggtctccc cgaaccgccg cacgcttcac gctcatcgtg accatagcta
     7021 gccggttcac gacgcctcgg gagttcggcg ttgccatctc ccttatctcc tgtccgagca
     7081 ccccgggttg ctatggggtg tcctcggtcc gggcttctct tcggatggcg ggccttggcc
     7141 cggccatcca catcttgaat ttcgggtcga cccccggggt ctcgctgcgc tcgcccggag
     7201 atttcgctta agtaagctgc gcttacttaa gctcaacctt cgcaccaacc ttttcgagcg
     7261 tggccttgat cttgttggcc tcgtccttgg ccacgccttc cttgatgttc ttcggcgcgc
     7321 cctcaacaag gtccttggct tctttcaggc caagcccggt caacgcacgc acttccttga
     7381 tgacttcgat cttcttctca cccgcgctgg cgagaacgac cgtgaactcg gttttctctt
     7441 cggcggcggc ggctgcagcg ccaccggctg cggggccagc agcgaccgcc accgcggcgg
     7501 cagccgaaac gccccacttc tcttcaagca tcttggccag atccgccgct tcaaggacgg
     7561 tgaggctcga caagtcttcg acgatcttct gtaggtcagc cattgttcat tcctattcgg
     7621 ttcgaaccag agttaaggag tgttgagccg tcagcccgct gcgtccttgg aagcataggc
     7681 ctggattacg cgcgcgagct tcgctgcggg cgcgttcgcg agttgcgcga tcttggtcgc
     7741 cggagcctgg atcaggccga tgatcttcgc gcgcaattcg tccagcgacg gcagggcggc
     7801 gagcgccttg acgccattgg tgtccagagc cgtcttgccc atcgagccgc caagaatgat
     7861 gaacttcgcg ttcgccttgg cgaaat
//
LOCUS       DATDHO010000125         3194 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_253378, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000125 DATDHO010000000
VERSION     DATDHO010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253378"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VIY07_02320"
     CDS             <1..490
                     /locus_tag="VIY07_02320"
                     /inference="COORDINATES: protein motif:HMM:NF013696.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY6380620.1"
                     /translation="DFDFNFARHDVLGGPTLNVGTIHGGLNINSVPDRATIGIDIRTI
                     PGQSHPKIRDQLASYLGDEVALRTLLDAESVWTSPDDPWIGGIFRITCEVAGFGEEIA
                     EAPYFTDASVLTPAIGSPPTAVIGPGELALAHQTDEFCFVSRIEEATEIYSRVIRSWC
                     GI"
     gene            complement(604..2223)
                     /locus_tag="VIY07_02325"
     CDS             complement(604..2223)
                     /locus_tag="VIY07_02325"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase"
                     /protein_id="HEY6380621.1"
                     /translation="MQEQGVRNGAYGADKFGFKNLAEVRWNLTEPLLYQYAISAGEAS
                     LVAGGALCAETGHHTGRSPKDKHTVLDELTRDSVWWDGNRKMSKENFDNLLADFVKHA
                     EGKKLFAQDLYGGADPKYRIKTRIFTELAWHSLFIRQLLIRPERAELTAFVPDLTVLD
                     FPSFKPDAKRHGGREGSDTMVAIDFTRKIVLICGSSYAGEMKKSVFTTLNFYLPAQNV
                     VPMHCSANVSHEGESALFFGLSGTGKTTLSADPDRILIGDDETGWGPDGIFNFEGGCY
                     AKTIKLSKEAEPMIWDATNRFGAVLENVVFDPVTRVPDYDDGSRTENTRSAYPLDFIP
                     NASRTGRAGHPKNIIMLTADAFGVMPPIAKLTPTQAMYHFLSGYTAKVAGTEKGLVGV
                     QPEFSTCFGAPFLPRHPSVYANLLRDYINRHKVDVWLVNSGWTGGKYGVGRRMPIKPT
                     RALVTAALNGSLKNADFRTDPYFGFSVPTSVPGVEPHLLNPFKTWKDKAEFDRTARDL
                     VNMFQKNFAKFEQHVTPDIKAAAPEVRIAAE"
     gene            complement(2443..>3194)
                     /locus_tag="VIY07_02330"
     CDS             complement(2443..>3194)
                     /locus_tag="VIY07_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HEY6380622.1"
                     /translation="GGLTGVTYESTPDGREGWLNAFVRKGWDVYNSDAVERGRSGFAP
                     PDVWNGEPNFLTKANPFERFRIGQGAGSWSTDPAQMKVNAGSQFPVEASDNFTKQIVP
                     RWTTTDSAIIAAYTALVDKVCPCVLLFHSQAGGFGFTVAQARPDKIKVIVAVEPAVAG
                     DKAQASKLKDIPTLVVYGDYIPLDSRWPKMRQIGLDYADAMRAAGGNVDVVNLPEAGI
                     KGNSHMLMMDKNNAQIADLIQNWLAGKGLVE"
BASE COUNT          626 a          940 c          959 g          669 t
ORIGIN      
        1 ggatttcgat ttcaatttcg cgcggcacga tgtccttggc ggaccgaccc tcaacgtcgg
       61 tacgattcat ggaggactca acatcaattc ggtgccggac cgcgccacga tcggtatcga
      121 catccgcacg atcccaggac aaagccaccc gaaaattcgc gaccaactgg ccagctatct
      181 cggcgatgaa gtcgcattgc gtacgctgct cgatgcggaa agtgtctgga ccagcccgga
      241 cgatccatgg attggcggga tattccgcat tacctgcgaa gtcgccggct tcggcgagga
      301 aattgcagaa gcgccttact ttaccgatgc ctcggttttg accccggcga tcgggtcacc
      361 gccaaccgct gtgatcgggc caggcgaatt agcccttgcc catcagacag acgaattttg
      421 ctttgtgtcg cggatcgagg aagcgacgga gatttattcc cgagtgatac ggagttggtg
      481 cgggatctag ggaaaacttc agccgttcat tcccgcgtaa gcgggaattc agagcaacga
      541 ttgcgaaatc cgaggttact tgctgggtct ccgcttgcgc ggggacgaac ggaagatcgc
      601 aagttactcc gctgcgatcc gaacttccgg tgccgccgct ttgatatccg gcgtgacgtg
      661 ctgctcgaac ttggcgaaat tcttctggaa catgttgacc aggtctcgcg cggtccggtc
      721 gaactcggcc ttgtctttcc aggtcttgaa cgggttgagc agatgcggct cgacgccagg
      781 cacggaggtg ggcaccgaga agccgaaata gggatcggtg cggaaatcgg cattcttgag
      841 tgaaccattg agcgccgcgg tgaccagcgc gcgcgttggc ttgatcggca tgcggcggcc
      901 aaccccgtat ttgcccccgg tccagccgga attcaccagc cagacatcga ccttgtgcct
      961 gttgatgtag tcccgcagca gatttgcata gaccgaagga tgccgcggca ggaatggcgc
     1021 accgaagcag gtcgagaatt cgggctgcac gcccacgagt cctttctccg ttccggcaac
     1081 tttcgccgtg tatccggaaa ggaagtgata catcgcctgg gttggcgtca gcttcgcgat
     1141 cggcggcatc acgccgaacg cgtcggcggt gagcatgatg atgtttttcg ggtggccggc
     1201 acggccagtg cgggatgcat tggggatgaa gtcgagcgga tatgccgagc gggtgttctc
     1261 ggtcctggag ccgtcatcgt agtcgggtac gcgcgtgaca ggatcgaaca ccacattttc
     1321 cagcaccgca ccgaagcggt tggtggcgtc ccagatcatc ggctcggctt cctttgagag
     1381 cttgatggtc ttggcgtagc aaccgccttc gaaattgaag atgccgtcgg gcccccagcc
     1441 ggtctcgtcg tcgccaatca gaatacggtc ggggtcggcc gaaagcgtgg tcttgccggt
     1501 cccggagagg ccgaaaaaca acgcgctctc gccctcgtga ctgacgttgg ccgagcaatg
     1561 catcggcacg acgttttgcg ccggcaaata gaagttgagc gtcgtgaaca ccgacttctt
     1621 catctcgccg gcgtaggacg agccgcagat cagcacgatc ttgcgggtga aatcgatggc
     1681 caccatcgtg tccgagcctt cgcgtccacc gtggcgcttg gcatcgggct tgaacgaagg
     1741 aaaatcgaga accgtgagat ccgggacaaa ggcagtcagc tcggcgcgct cgggacggat
     1801 cagcaattgc cggataaaca gcgagtgcca ggcgagctcg gtgaagatgc gcgtcttgat
     1861 ccgatatttc ggatcggcgc cgccatagag gtcctgcgcg aaaagctttt tgccttcggc
     1921 atgcttgacg aagtcggcca gcaagttgtc gaagttttcc ttcgacattt tgcgattgcc
     1981 atcccaccag accgaatcgc gcgtgagttc atcgaggacg gtgtgtttgt ccttgggact
     2041 gcggccggtg tggtggccgg tttcggcgca cagcgcaccc cccgcgacca gtgacgcctc
     2101 gcccgccgaa atggcgtatt ggtagagcaa cggctcggtc agattccagc ggacctcggc
     2161 cagatttttg aaaccgaatt tgtcggcacc gtatgcgccg ttccgcacac cctgctcttg
     2221 cacgcgattc ctcccaacag gccgcttatc cagaaacctt tcgcggggca tttggatccc
     2281 cgccgcggct cataacggta agtatagctc cttgcccaaa ggcgcgcgac cttagtcacg
     2341 cgtcccttga atgccaagtc aaaacgtcat gcattagccg caggccacat tgcgctgcat
     2401 caaaattgtc ggctgaccaa cactcgactg tccagcaccc ggctactcga ccaaaccctt
     2461 gcctgcgagc cagttctgaa tcaggtcggc aatctgcgca ttgttcttgt ccatcatcag
     2521 catgtgagaa tttcccttga tgccggcctc gggcaggtta acgacgtcaa cgtttccccc
     2581 cgccgcgcgc atggcgtccg cataatcgag gccaatctgc cgcatcttcg gccatcggct
     2641 gtcgagcggt atatagtcgc cgtataccac aagggttgga atgtctttca gcttgctggc
     2701 ctgcgccttg tcaccggcga cagccggttc gacggccaca ataaccttta tcttgtcagg
     2761 ccgtgcttgc gccaccgtaa agccgaagcc gccggcctgg ctgtgaaaca acagaacgca
     2821 gggacacacc ttgtctacca gcgcggtata ggcggcgatg atcgcactat cggtggtggt
     2881 ccagcgtggc acgatttgct tggtgaaatt gtcagacgct tcgacgggaa actggctgcc
     2941 ggcgtttact ttcatctgcg ccgggtcggt gctccacgag ccggcgccct gtccgatgcg
     3001 gaagcgctcg aaggggtttg ccttggtcag gaaattcggc tcgccattcc atacgtcagg
     3061 cggagcaaag cctgagcgtc cgcgctcgac ggcatcggag ttgtagacgt cccatccttt
     3121 gcggacgaag gcattgagcc agccctcccg gccgtcaggg gtgctttcat aggtcacgcc
     3181 ggtaagtccg ccgc
//
LOCUS       DATDHO010000126         2090 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_154332, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000126 DATDHO010000000
VERSION     DATDHO010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2090)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2090)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154332"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..536
                     /locus_tag="VIY07_02335"
     CDS             <1..536
                     /locus_tag="VIY07_02335"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEY6380623.1"
                     /translation="AGIKRIAPDFEVSVSAYPEKHPDSPTVEADIDMLKAKVDGGATR
                     AMTQFFFDNDLYFRYLDRVRARGVDIPIVPGILPVQNFKAATSFAKRCGTSVPAWIAD
                     RFQGLDNDSATRKLIAAAVAAEQVFDLVDRGVTTFHFYTMNRADLVFAICHLLGLRPA
                     APSLSQGERMSERSANG"
     gene            547..>2090
                     /locus_tag="VIY07_02340"
     CDS             547..>2090
                     /locus_tag="VIY07_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEY6380624.1"
                     /translation="MSDTSVRSEFLALLKQRILVLDGAMGTMIQALKLNEEGYRGARF
                     DAWNREVRGNNDLLNLSRPDAVRDIHLAYFRAGADIVSTNTFSSTAIAQADYGMEGIA
                     YELNQAGAALAREAAAQAETEDGRRRFVAGAIGPTNRTASISPDVSNPGFRAITFDQL
                     RTAYGEQVRGLIDGGADLLLIETIFDTLNAKAAIFAISEICDQRGLDLPIMISGTITD
                     RSGRLLSGQTPAAFWNSVTHARPLTVGLNCALGAREMRAHIAELARVADTFVCAYPNA
                     GLPNEFGYYDESPAYMAELLGEFAEAGLVNVVGGCCGTTPDHIRAIAQAVAGKAPRTI
                     TDVPRQLRLSGLESFTLTPEIPFVNVGERTNVTGSAKFRKLITAGDYPTALTVAREQV
                     ENGAQVIDVNMDEGLLDSEHAMTTFLNLIAAEPDIARVPVMVDSSKFSVIEAGLKCLQ
                     GKSVVNSISLKEGEAAFIDHARTVRRYGAAVVVMAFDEKGQADTLERKTAISRRAYDI
                     LVNQVG"
BASE COUNT          402 a          654 c          631 g          403 t
ORIGIN      
        1 tcgccggcat caagcgaatt gcccccgatt tcgaagtttc agtctcggcc tatcccgaaa
       61 agcatccgga cagtccgacg gtcgaagccg atatcgacat gctcaaggcg aaggtcgacg
      121 gcggcgccac tcgcgcaatg acccagttct tcttcgataa cgatctctat tttcgttatc
      181 tcgaccgtgt gcgcgcgcga ggcgtggata ttccgatcgt gcccggcata ttgccggtgc
      241 agaatttcaa ggcggccacc agcttcgcca agcgttgtgg cacttcagtg ccggcctgga
      301 ttgccgaccg ctttcagggc ctcgacaatg acagcgccac acgcaagctg atagccgctg
      361 cagtcgcagc cgagcaggtt ttcgatctgg tcgaccgcgg cgtcaccaca ttccatttct
      421 atacgatgaa tcgcgccgat cttgtcttcg cgatctgcca tctgctgggc ttgcggcccg
      481 cggcgccttc cctctcccaa ggagagagaa tgtccgagcg aagcgcgaac gggtgatgcg
      541 agtcacatgt ccgacacgag cgtacgatcc gaattcctcg ccctcctgaa acagcgcatc
      601 ctggtgctcg acggcgccat gggaacgatg atccaggcgc tgaagctcaa cgaggagggg
      661 tatcgcggcg cgcggttcga cgcctggaac cgcgaggtgc gcggcaacaa cgatctgctc
      721 aaccttagcc ggcccgatgc tgtgcgcgat atccacctgg cgtacttccg cgcgggcgcg
      781 gatattgtat cgaccaacac attctcctcg actgcgattg cccaggccga ttacgggatg
      841 gaaggcatcg cttacgagct caaccaggcg ggcgcagcgc tcgcgcggga agccgccgcg
      901 caggcagaaa cagaagacgg tcgccggcgt tttgtagccg gcgcgatcgg cccgacaaat
      961 cgaacggcgt cgatttcgcc cgacgtttcc aatccgggat tccgtgccat cactttcgat
     1021 cagctccgca ccgcctatgg tgaacaggtg cgtgggttga tcgatggcgg ggcggatctc
     1081 ctgctgatcg aaacgatatt tgacacgctc aatgccaagg cggcgatctt tgcgatctct
     1141 gagatctgcg atcagcgtgg tctcgacctt ccgatcatga tctcaggtac gatcaccgat
     1201 cgttcgggac gcctgctgtc gggccagacg ccggccgcat tctggaattc cgtgacacat
     1261 gccaggccgt tgacggtcgg cctcaactgc gcgctcggcg cgcgcgagat gcgcgcgcac
     1321 atcgccgaat tggcgcgggt ggccgacaca ttcgtatgcg cttatccgaa tgccggcttg
     1381 ccgaacgaat tcggttacta cgacgagagc ccggcctaca tggccgagct gctgggcgaa
     1441 ttcgccgagg ccggcctggt caacgtagtc ggcggctgct gcggcacgac gccggaccat
     1501 atcagggcga tcgcgcaagc cgtcgccggc aaagcccccc gcacgattac cgacgtgccc
     1561 cgccaattgc gcctgtcggg cctggagtcg ttcacgctca cgcccgaaat ccctttcgtc
     1621 aacgtcggcg agcggaccaa cgtcaccggc tccgcgaagt ttcgcaagct gatcacggcc
     1681 ggcgattacc cgaccgcatt gacggtcgcg cgggagcagg tcgagaacgg cgcccaggtt
     1741 atcgacgtca atatggacga aggcttgctc gactctgagc acgccatgac gacctttctc
     1801 aatctgattg ccgccgagcc cgacatcgct cgcgtgccgg tgatggtgga ctcatcgaag
     1861 ttttctgtaa tcgaagccgg cctgaagtgc ctgcaaggga agtcggtggt caattcaatc
     1921 tcgttgaagg agggtgaggc ggctttcatc gatcacgccc gtaccgtacg ccgttatggc
     1981 gcggcggtgg ttgtgatggc gttcgacgaa aaaggccaag ccgatacgct cgaacgcaag
     2041 acggcaatct cccggcgcgc atatgacatc ctggtcaacc aggtcggatt
//
LOCUS       DATDHO010000127         1720 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_154458, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000127 DATDHO010000000
VERSION     DATDHO010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1720)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1720)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1720
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_154458"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /locus_tag="VIY07_02345"
     CDS             <1..208
                     /locus_tag="VIY07_02345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380625.1"
                     /translation="AAVSVASGRIAVPFHIQDIATSFAINGQVLRHTASKVERYTLQN
                     GGVRDLRRVVKAAQAALRFKGIGL"
     gene            complement(266..835)
                     /gene="phaR"
                     /locus_tag="VIY07_02350"
     CDS             complement(266..835)
                     /gene="phaR"
                     /locus_tag="VIY07_02350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HEY6380626.1"
                     /translation="MAEEKKEPVTIKKYANRRLYNTGTSTYVTLEDLATMVKNGEDFI
                     VYDAKTGEDITRSVLAQIIFEQENKEGQSLLPITFLRQLIRFYGDSMQMLVPRFLEAS
                     IESLSREQGKFREQMAQAFGVGAFGPLEDQVRRNMEMFEKTFAMFAPFARGQGKQPEK
                     PQSSNSEMEDLKRQLDEMQKRLDKLGEKE"
     gene            1085..>1720
                     /locus_tag="VIY07_02355"
     CDS             1085..>1720
                     /locus_tag="VIY07_02355"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643534.1"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEY6380627.1"
                     /translation="MKDDIVIVSAARTPVGAFNGAFANLPAHDLGKVAIKAAIERAGV
                     EGERVSEVILGQILTAGQGQNPARQASIAAAIPVETPAWGVNQLCGSGLRAVALGYQA
                     VLNGDSEIVVAGGQESMSMAPHCQHLRMGVKMGAFEMIDTMIKDGLWDAFNGYHMGTT
                     AENVAKQWQITRQQQDEFAVASQNKAEAAQKAGRFKDEITPVTIKSRKGDVV"
BASE COUNT          366 a          483 c          510 g          361 t
ORIGIN      
        1 ggcagctgta tcggttgcct caggacgcat cgcagtaccg tttcacattc aggatatcgc
       61 gacgtcgttc gcaattaacg ggcaagtgtt gcgccacacc gcctcgaaag ttgaaaggta
      121 cacgcttcaa aatggtggag tgcgagattt gcgacgcgtg gttaaagcgg cgcaggcggc
      181 cttgcgattc aaggggatag gattgtgacc gggacggatt aaagccgacc tttacccaac
      241 gatagcggca acagggccga cgcctctatt ctttttcgcc gagcttatcc aaacgctttt
      301 gcatttcgtc gagctgccgc ttgaggtcct ccatttcgct gttagagctt tgcggctttt
      361 ctggctgctt cccctgaccg cgtgcaaacg gcgcgaacat ggcgaaggtt ttctcgaaca
      421 tttccatatt tcggcggacc tggtcctcga gcgggccaaa tgcgccgacg ccgaaggctt
      481 gcgccatctg ctcgcggaat ttgccctgtt ctctcgacag ggattcaatg gaggcttcca
      541 aaaagcgagg gaccagcatc tgcatgctgt cgccgtagaa acggatcaac tgccgcagaa
      601 aagtgattgg caggaggctc tgcccttcct tgttctcctg ttcgaaaatt atctgcgcca
      661 gcaccgagcg cgtgatgtcc tcgcccgttt tcgcatcgta gacgatgaaa tcctcgccgt
      721 tcttgaccat cgtggcgaga tcctcaagcg tcacgtaggt gctggtgccg gtattgtaga
      781 gccgccggtt tgcgtacttt ttgattgtaa ccggctcttt tttttcctct gccatgtgga
      841 ccacacgttt cccctgccca gggtttaagc atagccaatt tccacttccg tgggccaccg
      901 ttttgtggca acgcggcacg gtcggcgagg ggatggcgtc ccttgcggaa agacctgaaa
      961 agcgccaatt gtcgcgaata ttccaaaggc aggttgggtt gacagaccga caggcccctc
     1021 caaggatgcg gcagtgccaa aaaaccgctc cttgccccag aactcgacgt aacaggagtt
     1081 tcagatgaaa gacgatatcg tcatcgtgag tgccgcgcgc accccagtcg gcgctttcaa
     1141 cggggcattc gcgaacctgc cggcccacga ccttggaaag gtcgcgatca aggccgctat
     1201 cgaacgcgcc ggcgttgaag gcgagcgtgt cagcgaagtg atccttggac agatcctgac
     1261 cgccggtcag ggccagaatc cggcgcggca agcatcgatt gcagccgcga ttccggtgga
     1321 aacacccgct tggggcgtaa accagctatg cggttccggc ctgcgggcgg tcgcgctcgg
     1381 ctaccaggcg gtcctgaacg gcgacagcga gatcgttgtt gccggcgggc aggagtcgat
     1441 gagcatggcg ccacactgcc agcatttgcg catgggcgtg aagatgggcg cgttcgaaat
     1501 gatcgacacc atgatcaagg acggcttgtg ggacgccttc aacggctacc acatgggaac
     1561 cacggcggaa aacgtcgcta aacaatggca gatcacgcgt cagcagcagg atgaattcgc
     1621 cgtcgcctcg cagaacaagg cagaagcggc ccagaaagcc ggcaggttca aggatgagat
     1681 tacgccggtc actataaaat cgcgtaaagg cgatgtggtg
//
LOCUS       DATDHO010000128         3311 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_303247, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000128 DATDHO010000000
VERSION     DATDHO010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3311
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_303247"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..384
                     /locus_tag="VIY07_02360"
     CDS             <1..384
                     /locus_tag="VIY07_02360"
                     /inference="COORDINATES: protein motif:HMM:NF023816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380628.1"
                     /translation="DLAIETLADVGLRDYVDVPVTTLTVGLLKRLEVARALAMRPKLV
                     LFDEIMAGLTPTEVSTMTKFVGGLPARGITVIWVEHVLYAIMKTASRIMVLNRGELIA
                     NGEPAAVARDPAVMKAYLGEEMSLA"
     gene            386..1081
                     /locus_tag="VIY07_02365"
     CDS             386..1081
                     /locus_tag="VIY07_02365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380629.1"
                     /translation="MKDLDAFYGPVQVLHSVNLSVRQGEIVGLVGANAAGKSTLMFTL
                     AGLRTRCTGDIRFDERPIANLSAYERVSLGLVLVPERRRLFPFMTVLENLEIGAYASN
                     ARRAASRTIEEVFALLPVLGERRKQVAGTLSGGEQQMLAIGRALMAKPSTLLLDEPTE
                     GLAPIYVKLLFDLVADLRQKGITILIVEQNVHHVLQASDRAYVLENGRVVLEGRGQTL
                     LRDERLKVAYLGL"
     gene            1084..2061
                     /locus_tag="VIY07_02370"
     CDS             1084..2061
                     /locus_tag="VIY07_02370"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6380630.1"
                     /translation="MITDIHRHFVPAAFFDFIKSRPDFQVILKREEDEIIDVDIRGMH
                     FGLNKTFFDLPRQVERMKREGVERSILSLATPFINYHLDASIMVPTARQFNDAIAAAI
                     AGREKQFRAWAFLPMQDPDAAAEELVRCVRELRFVGGHVASNVRGVYLHDAQFEPIYR
                     AALDLDVPLFVHPADPPGKERTREYELTVVAGYLFDNTINILKMVCSGFLDRWPRLKL
                     VCAHTGAFSLVLRARMQREVDTNVHLSGTLKASVGDYLRRLYFDTICFDPAILQFAAS
                     AVPVEHLLMGSDAPFPLGEPEPVSFVRKALPADQADAVMRRNFDRLVGA"
     gene            2063..2620
                     /locus_tag="VIY07_02375"
     CDS             2063..2620
                     /locus_tag="VIY07_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid synthesis family protein"
                     /protein_id="HEY6380631.1"
                     /translation="MEIRRTLVVKDTVSFEGGAPAIVPVTRVAACAVIANPLAGVVTD
                     DLQALVPFGAELGAYLVRTAADALQAPVLSYGKGAIVGTAGDIEHAAAIIHPRMGKPM
                     RDAIGGGQAIIPSNVKVGAAGTSIDIPLGHKDDVWSFDEIDTLTVTTPGAPRPDEIVV
                     VVALANGGRPRPRVAKSGAIPPKRA"
     gene            2668..2937
                     /locus_tag="VIY07_02380"
     CDS             2668..2937
                     /locus_tag="VIY07_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3303 family protein"
                     /protein_id="HEY6380632.1"
                     /translation="MLFIVIERFKSAEAASEVYRRFAERGRMLPDGLKYLDSWVEENL
                     DRCFQLMETDDAKLFEQWIACWQDLVDFEVIPVVNSADAQKKAGP"
     gene            complement(3043..>3311)
                     /locus_tag="VIY07_02385"
     CDS             complement(3043..>3311)
                     /locus_tag="VIY07_02385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007775356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY6380633.1"
                     /translation="FELVLHKKKLDMPRAVTPTHYITMGLDPDLDDAAKQALRDMIRW
                     LVEMTGWSSEEAYVFCSLACDLRVTQLVDGNKGIHAMVERNLVQ"
BASE COUNT          681 a          891 c          984 g          755 t
ORIGIN      
        1 gatcttgcga ttgagacgct cgccgatgtc ggccttaggg actatgtcga tgttccggta
       61 acaactctca cggttgggtt gctcaaacgt cttgaagtcg cccgtgcgct cgcaatgcga
      121 ccaaaactcg tcttgttcga cgaaatcatg gcgggattga cgcccaccga agtcagcacg
      181 atgaccaagt tcgttggcgg tctgccggct cgcggcatca cagtcatctg ggtcgagcac
      241 gtcctgtatg cgatcatgaa gacggcgagc cgcatcatgg tgctcaatcg cggtgagttg
      301 atcgccaatg gcgaaccggc agcagtcgcc cgcgaccccg ccgtgatgaa ggcttatctc
      361 ggagaggaga tgagccttgc ttgaggtgaa agatctggac gccttctacg ggccggttca
      421 agttctgcac tcggtgaacc tgtcggtccg gcaaggcgaa atcgtcggac ttgttggagc
      481 gaatgccgca ggaaaaagca cgctaatgtt cacccttgcc ggcctgcgca cgaggtgcac
      541 cggcgacatt cgtttcgacg aaagaccaat tgcaaacctg tccgcgtacg aacgtgtctc
      601 gctggggctg gtactggtgc ccgaacgacg gcgcctgttt cccttcatga cggtgcttga
      661 gaatctcgag atcggtgcct acgcgagcaa cgcgcgccgt gccgctagtc ggacgatcga
      721 ggaagttttt gctcttcttc cggtgctggg cgaacggcgg aagcaggtgg cgggcacgct
      781 aagcggcggt gaacagcaaa tgcttgcaat cgggagggcg ctgatggcta agccgagcac
      841 cttactgctt gatgagccta ccgagggcct ggcgccgatt tatgtgaagc tgctcttcga
      901 ccttgtggca gatctccggc aaaagggaat aactatcctg atcgtcgaac aaaacgtaca
      961 tcacgtatta caagcttccg atcgcgccta cgttctggag aacggtcgcg ttgtgcttga
     1021 agggcgtggt cagactttgc tcagggacga gcgcttaaag gttgcctatc tcggattgtg
     1081 accatgatta ccgatattca tcgacatttc gtaccggcgg cattctttga ttttataaaa
     1141 tcgcgcccgg acttccaggt gattcttaag cgcgaggaag acgaaattat cgatgttgat
     1201 attcgtggga tgcattttgg cctgaacaag actttttttg atctgccgcg gcaagtcgag
     1261 cgaatgaaac gcgaaggtgt cgagcgatcg atcctgtcgc ttgctactcc atttatcaat
     1321 taccacctcg atgcatcgat aatggtgccg acggcgcgtc agttcaacga cgcgatagca
     1381 gcagctatcg ctggccgaga gaaacaattc agagcctggg cgtttctacc tatgcaggat
     1441 ccggatgctg ccgcagaaga acttgtgcgc tgcgtgcggg aacttcgttt cgtcggaggt
     1501 cacgtagcgt cgaacgtgcg aggcgtctac ttgcatgatg cgcagttcga gcctatttac
     1561 cgcgccgctc tcgatctgga cgtaccgctc tttgtgcatc cggcggatcc gccgggcaag
     1621 gaacgaaccc gcgagtacga gctaacagtg gttgccgggt atctattcga taacaccatc
     1681 aatatcctca aaatggtgtg ctccgggttt ctcgaccgat ggccgcgatt aaaattggtc
     1741 tgtgcccata ccggcgcgtt cagcctggtt ctgagggcgc gtatgcaacg ggaggtcgac
     1801 accaacgtgc acctatccgg cacattgaag gcgtcggtcg gtgattatct gcggcggctc
     1861 tattttgata cgatctgttt cgacccggcc atcctacaat ttgccgccag cgccgtcccg
     1921 gtggagcatc tgttgatggg gagtgatgcg ccgtttccgt tgggtgagcc ggaaccagta
     1981 agttttgtgc gcaaagcgct tccggcggac caggcagacg ctgttatgcg ccggaatttc
     2041 gaccgccttg ttggagcttg agatggaaat ccggcgcacg ctcgtggtga aagatactgt
     2101 tagcttcgag ggcggtgccc ccgcgatcgt gcccgtcaca cgtgttgccg cctgcgcggt
     2161 gatagcgaat ccgctcgctg gcgttgtaac ggacgatctg caagcactcg tcccattcgg
     2221 tgccgaactg ggcgcctatc tggtacgaac cgccgccgat gcgctgcagg caccagttct
     2281 ttcttatggc aaaggcgcca tagtgggcac ggcaggtgac atcgaacacg cagccgcaat
     2341 cattcatcca cgaatgggaa agcctatgcg cgatgcaatc ggcggtggcc aggccatcat
     2401 tccatctaac gtcaaagtag gtgccgccgg tacttccatc gatatcccat tggggcacaa
     2461 ggacgatgtc tggtcgtttg atgaaatcga tacactgacg gtcacgacgc cgggtgcacc
     2521 tcgccctgac gaaatcgtgg tagtcgttgc attggcaaat ggtggccggc cacgtccacg
     2581 cgtagccaaa tcgggagcga tacctcccaa gcgggcctga caggttatga cgaagcaggc
     2641 ggtttccatt aggtgggacg agcacttatg ctctttatcg tcatagaacg tttcaagagt
     2701 gcagaggcgg cttcggaagt ttatcgacgc tttgcggagc gagggcggat gctgcccgac
     2761 gggctcaaat acttggatag ttgggtggaa gagaacctag atcgttgctt ccaactgatg
     2821 gagaccgatg acgcgaagct attcgaacaa tggatcgctt gttggcagga cctagtagat
     2881 tttgaagtaa ttcctgtcgt caactccgct gacgcccaaa agaaagccgg gccgtaaacg
     2941 cggctgaggt cgcttgccaa cggttcggtc ttcaactcat catgggagtg ctgacgcgat
     3001 ctgctgcgcc agccagccat tgccgtctct ggatttcgat atctattgca ccaggttccg
     3061 ctccaccatg gcgtggattc ccttgttgcc gtcgaccaat tgtgtcacgc gcaggtcgca
     3121 ggcgaggctg cagaacacgt aggcctcctc tgaactccag cccgtcatct cgaccagcca
     3181 gcgtatcatg tcgcgcaatg cctgcttcgc ggcgtcgtct agatctgggt cgagacccat
     3241 tgtgatgtaa tgcgtgggtg tgacggcgcg cggcatgtcc agtttctttt tgtggagtac
     3301 gagttcgaac g
//
LOCUS       DATDHO010000129         5735 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_253733, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000129 DATDHO010000000
VERSION     DATDHO010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5735
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253733"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..805
                     /locus_tag="VIY07_02390"
     CDS             <1..805
                     /locus_tag="VIY07_02390"
                     /inference="COORDINATES: protein motif:HMM:NF021633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OpgC domain-containing protein"
                     /protein_id="HEY6380634.1"
                     /translation="DFLKNPDVTIFQALILKFKPVNMDILPLYILLLAWFPPMLWLLL
                     RAPSIALIASATLYALMWVFEWNIPAYPSGTWIFNPFAWQLLFVFGAWCALGGAQNLS
                     RFIHSPILVGLAIAYVVFAFAITMTWYFPRLAVHVPKVVGEAIYPIDKTNLDVLRILH
                     FLALAIITVAAVPRNWSGLKSWVFWPAIVCGQHSLETFCLGVFLSFAGHFVFTEVSNR
                     VLTQIIVSFAGIAIMVTIAALISWYRQVERRGGGPHPPAAKPGYAGGEV"
     gene            802..1542
                     /locus_tag="VIY07_02395"
     CDS             802..1542
                     /locus_tag="VIY07_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HEY6380635.1"
                     /translation="MRRRLLPLALLLLAAGPAWAEQPAECRVAENLVEASFRLPHVAR
                     ALASKHLNVLVVGAGSSQLPAGNAYPARLQRALAEKLPGVEIKVTTDVKAGRTAAEMV
                     KGLPASLDSAKPALLVWQTGTVDAMLGVDPDQFSQALDKGIKMARAAGADVVLINAQY
                     SPRTETMIAVGTYVEDMRWVALQQEVPLFDRFSIMKLWGELGTFDLNSATKKLDIAER
                     VHDCIGRLLADMVIAAAKPEEPPTNGSR"
     gene            1564..2367
                     /locus_tag="VIY07_02400"
     CDS             1564..2367
                     /locus_tag="VIY07_02400"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HEY6380636.1"
                     /translation="MIGDPAQRVKLVFATAFAAGLAVPFPAIAGTATPSCSVPLDLIR
                     LANPLPHVAKKVMAADPITVVAIGSSSTSGAGASSPASNYPSRLLIELQQHFPKVSIT
                     MLNRGVGGEEIGDMLQRFDLAVIAAKPDLVLWQLGTNSVIRGHRLGDHGALIRTGLAK
                     IRAAGADVVLIDPQFAPKVIAKPDAEEMVALISATAKREDVDLFRRFEVMRHWRDVDR
                     LAFETFVSPDGLHMNDWSYACMAKGLGNAIAEAINRPIMSATALSHAMP"
     gene            complement(2382..3569)
                     /locus_tag="VIY07_02405"
     CDS             complement(2382..3569)
                     /locus_tag="VIY07_02405"
                     /EC_number="4.2.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HEY6380637.1"
                     /translation="MSASTKSYRPETRLVHAGTLRSEFGETSEALFLTQGYVYPTAED
                     CEARFSGKIPGYVYSRYSNPTMSMFEQRMAAFEGAEAARSTATGMAAVTTALMGLVRA
                     GDHVVAAKALFGSCRWVIEEWLPRFGVTSTLVNGTDLDAWKRAVQKNTKVFFLESPTN
                     PTLEVIDIAAVADIAHNAGARLVVDNVFATPLYQHPLALGADCVVYSATKHIDGQGRV
                     LGGIILGSEKLILDHYHQVLRQTGPSLSAFNAWILLKGLETLPVRVQRQTDNAGAVAS
                     ALAGHKKITRLIYPGRPDHPQADIIRKQMLAGSTLCSFEVKGGKEGAFRFLNALRLIG
                     ITNNLGDAKSLVTHPTTTTHQRLTPDQRAELGIGDGLIRFSAGLEHPDDLIEDLVAAL
                     DKV"
     regulatory      complement(3675..3753)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            3829..4932
                     /locus_tag="VIY07_02410"
     CDS             3829..4932
                     /locus_tag="VIY07_02410"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2'-deoxycytidine 5'-triphosphate deaminase"
                     /protein_id="HEY6380638.1"
                     /translation="MTLSFAVEDRGILPDRMIAALAADGGILSENQFVPDQIQPASLD
                     LRLGEVAYRVRASFLPGRTTVARRIDELKLHEIPLSDGAVLETGCVYIVPLLESLALP
                     EEISAAANPKSSTGRLDVFTRVIADETRGFDRIEPGYHGPLYAEISPRTFPVLVREGS
                     RLSQIRFRRGHALLDAGALRELHARERLVDADKADVGEGVAVSVDLSGLGPGGLVGYR
                     AKRHTGLIDVERRGGYAVADFWEPMQARPDKTLILDPNEFYILASKEAVQVPPDYAAE
                     MVPFDPLVGEFRVHYAGFFDPGFGYAGAGGKGARAVLEVRSREVPFILEHGQIVGRLI
                     YEKMLARPEKLYGQGIGSNYQAQSLKLSKHFKN"
     gene            4985..5058
                     /locus_tag="VIY07_02415"
     tRNA            4985..5058
                     /locus_tag="VIY07_02415"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5017..5019,aa:Gly,seq:ccc)
     gene            5208..>5735
                     /locus_tag="VIY07_02420"
     CDS             5208..>5735
                     /locus_tag="VIY07_02420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380639.1"
                     /translation="MAAMLSVARNPAYKPGRLFALLDAFYPVPKGKTLRPTTYLPYLS
                     YAPSAWVLPLKFTGGGLSAPGKIMFDAEGSAWTGVNFIVGSQASDALWDGNLSKFSAN
                     GKPLSPPTTGFTGGGVEGPGFGTAVDANGRVWVTSTGSKTISLFDKDGKPLSPQDGCN
                     FGGQLGVMQGIIVVPN"
BASE COUNT         1092 a         1665 c         1737 g         1241 t
ORIGIN      
        1 cgatttcctc aaaaatccgg acgtgaccat ttttcaggcg ctgatcctga agttcaagcc
       61 ggtcaacatg gacatcctgc cgctctacat cctgctgctg gcgtggtttc cgccgatgct
      121 gtggctgctg ttgcgtgcgc cgtcgattgc gttgatcgcg tcggcgacgc tctacgcgct
      181 gatgtgggtg ttcgagtgga acattcccgc ctatccaagc gggacctgga ttttcaatcc
      241 attcgcctgg caactgctgt tcgtgtttgg agcgtggtgc gccttaggtg gcgcgcagaa
      301 cctttcccgc tttattcatt cgccgatcct ggtcgggctc gcgattgcct atgtagtgtt
      361 cgcgtttgca attacgatga cctggtactt cccgcggctt gcggtgcacg tgcccaaagt
      421 tgtcggcgag gcaatatatc cgatcgacaa gaccaatctc gatgtgcttc gcatcctgca
      481 tttccttgcg ctcgctatca ttacggtcgc cgcggtgccg cgtaactggt ccgggctgaa
      541 atcgtgggtt ttctggccgg cgatcgtctg cgggcagcac tcgctggaaa cgttttgtct
      601 cggtgtcttc ttgtcctttg ccggacactt tgtattcacg gaggtttcca atcgcgtatt
      661 aacgcaaata atcgtcagct tcgcgggcat tgccatcatg gtgacgattg cggcactcat
      721 ttcatggtat agacaagtcg aacggcgagg cgggggaccg cacccgcccg ccgcaaagcc
      781 gggttatgcg gggggcgagg tatgaggaga cgcttgcttc cgcttgcgtt gcttttgtta
      841 gctgccggtc ctgcatgggc cgagcagccg gccgaatgtc gcgttgcgga gaatttggtc
      901 gaggcaagct tccggttgcc gcatgttgcc cgtgccttgg cttcgaaaca tctgaacgtg
      961 ctggtggtgg gcgccggttc atcgcagttg ccggccggca atgcctatcc ggcgcggctt
     1021 cagcgcgcgc tagccgaaaa actgccgggc gtcgaaatta aggttacgac cgacgtcaaa
     1081 gccggtcgca ccgctgccga aatggtgaag ggtcttcccg ccagtctgga ctcggccaag
     1141 ccggccctgc ttgtttggca aaccgggacc gtggacgcga tgcttggggt cgacccggat
     1201 caattcagcc aggcgctcga taaaggtata aaaatggccc gcgcggcggg cgccgatgtt
     1261 gttttaatca acgcgcaata cagcccccga acagaaacaa tgattgcagt cggtacttat
     1321 gtggaagaca tgcggtgggt tgcactgcag caggaagtgc ccttgtttga tcgattcagc
     1381 atcatgaaat tgtggggaga gctcggcacg ttcgatttaa attcggccac gaaaaaactt
     1441 gacatcgccg agcgcgtcca cgattgcata gggcggttgc tggccgatat ggtgatagcc
     1501 gcagccaaac ccgaagagcc gccgaccaac ggcagccgct gattgagacc agagggagtg
     1561 cacgtgatcg gcgatcccgc acaacgggtg aaactggttt ttgccaccgc cttcgcggca
     1621 gggttggctg tgccatttcc cgccattgct ggcacggcga cgccgtcttg cagtgttcct
     1681 ctcgatctca ttcgcctggc aaacccgctc ccacacgttg cgaagaaggt catggcggcc
     1741 gatccgatca cggtcgtcgc aattggatca tcttcgacat caggcgcggg cgcgagttcg
     1801 ccagcatcga actatcccag ccggctcttg atcgaactcc agcaacattt tccaaaagta
     1861 tcgatcacga tgttgaaccg cggggtgggc ggtgaagaaa tcggcgatat gctccagcgg
     1921 ttcgacttgg ccgttatcgc ggccaaacct gatctcgtgc tctggcaact cggcaccaat
     1981 tcagtcattc gtggtcatcg cttgggagac cacggtgccc tcatccgcac ggggctggcc
     2041 aaaattcgcg cggccggcgc cgatgtcgtc ctgatcgatc cgcagtttgc gccgaaggtc
     2101 atcgcaaagc ccgatgcgga agagatggtc gccctgatct ccgcgacggc gaagcgcgag
     2161 gatgtcgacc tgttccgccg tttcgaagtg atgcgtcact ggcgtgatgt tgatcgtctg
     2221 gcctttgaaa cgttcgtgtc gccggatggc ctgcacatga acgactggag ctatgcctgc
     2281 atggcgaagg gcctgggcaa tgcaattgcc gaagcaatca accggccgat catgtcggcg
     2341 actgcgcttt cgcacgcgat gccctgaccg aactccgtcg cttacacttt atccagcgcc
     2401 gcaaccagat cctcgatcag atcgtcgggg tgttctaggc cggctgaaaa tctgatcagt
     2461 ccgtctccga tgcctagttc tgcccgctga tcgggcgtca gccgttgatg ggtggtggtg
     2521 gttggatgcg tgaccaggct tttcgcgtcg ccgaggttgt tggtgatgcc gatcagccgc
     2581 aacgcattga ggaaacggaa ggcgccttcc ttgccgcctt tgacttcgaa cgagcaaagc
     2641 gtcgaacccg cgagcatctg ctttcgaatg atatccgcct gcgggtgatc gggccggccg
     2701 ggatagatca accgcgtgat cttcttatga ccggcgagtg cactggcgac ggcgcccgca
     2761 ttgtcggtct ggcgctgcac gcgcaccggc aaggtttcaa ggcccttgag caaaatccag
     2821 gcgttgaatg ccgacaacga tggaccggtc tgacgcaaga cctgatgata gtggtcgagg
     2881 attagttttt ccgaaccgag gataatcccg ccaagaacgc gtccctgccc atcgatatgt
     2941 ttggtcgccg aatagaccac gcagtcggca ccaagcgcca gcgggtgctg atagagcggc
     3001 gtcgcgaaca cgttgtcgac cacgagcctg gcaccggcgt tgtgcgcgat gtccgcgacc
     3061 gcggcaatgt cgatgacctc gagtgtcggg ttggtcggcg attcaaggaa aaacaccttg
     3121 gtgtttttct gaactgccct tttccatgcg tcgaggtcag tcccattaac cagtgtcgac
     3181 gttacgccga agcgcggcag ccactcctcg atcacccagc ggcaggaccc gaacagcgcc
     3241 ttggcggcca ccacgtgatc gccggctcgc acaagaccca tcagggccgt cgtcacagcg
     3301 gccatgccgg tcgccgtcga tcgcgcagct tcggcccctt cgaatgcggc catgcgctgc
     3361 tcgaacatgc tcatggtcgg attggaatag cgcgaataga catagccggg aattttgccc
     3421 gagaaacgtg cctcgcaatc ctcggcggtc ggatagacgt aaccttgggt aagaaacagc
     3481 gcctccgagg tctcgccgaa ctccgagcgc aaggtgccgg catgaaccag ccgggtttcg
     3541 gggcgatagc ttttggtcga cgcggacatt gacggcctcc tttccgccct gcgcacggtt
     3601 tttcagaaaa ccgacatcac ttttggccgt gcgcgtggcc aacaaaaaac cggccggaga
     3661 aatgtctcgg ccgggctcac gcgtccccgg ccttttagcg acttgtttta cgtggctgca
     3721 agccggccgg ctcaaatgac cacgggataa gatgtttcta gcgggaccca ccgcttcccg
     3781 tcaaggcacc actcaggtta gatcggcccg tctgaaaaca gggccgccgt gacactttct
     3841 ttcgctgtcg aggacagagg cattctgccc gatcggatga tcgcggcgct cgccgccgat
     3901 ggcggcatat tgtccgaaaa tcagttcgtc ccggatcaga tccagccagc gagcctcgat
     3961 ctgcgtttgg gcgaggtggc ctatcgtgtt cgcgcaagct ttttgcccgg ccgcaccacg
     4021 gttgcgcggc gcatagacga gctgaaattg cacgaaattc cgctcagtga cggcgccgtc
     4081 ctggaaaccg gctgcgttta catcgtgcca ttgctcgaaa gtctggcatt gcccgaggag
     4141 atttctgcgg ccgccaatcc gaaaagctcg accggccgcc tcgacgtgtt cacccgcgtg
     4201 attgcggacg agactcgcgg gttcgatcgc atcgagcccg gctaccatgg gcccctctat
     4261 gccgagatca gcccgcgaac gtttccggtg ctggtccggg aaggatcacg gttatcgcaa
     4321 atccgctttc gccgcggtca cgcgttgctc gacgccggcg ccctgcgcga actgcatgcg
     4381 cgcgagcgtc tggtcgatgc cgacaaggcc gacgtgggcg agggggtggc agtcagcgtg
     4441 gatctttccg gcctcggtcc aggcggtctc gtcggctatc gggcaaagcg tcacacggga
     4501 ctgatcgacg tggaacggcg tggcggatac gcggtcgccg atttctggga gccgatgcaa
     4561 gcccgtcccg acaagaccct gatcctcgac cccaacgagt tctatattct cgcctcgaag
     4621 gaagcggtgc aggtgccgcc cgactatgcc gcggagatgg tgccattcga tcctttggtc
     4681 ggcgaatttc gcgtccacta tgcgggcttc ttcgatccgg gttttggata tgccggggct
     4741 ggcggcaagg gcgcgcgcgc cgtccttgaa gtgcgttcgc gcgaggtgcc gttcattctc
     4801 gagcatggac agattgtcgg ccgtttgatt tacgagaaga tgcttgcacg gcctgagaaa
     4861 ttgtacggcc aaggcatcgg ttcgaactat caggcgcaga gcctgaagct ctccaagcat
     4921 ttcaaaaact gagcgtgaca gcgtgcttgc cgcgcacgct cggcattcgt tatggtggag
     4981 cagcgcgggc gtagttcaat ggtagaacgg cagcttccca agctgcatac gagggttcga
     5041 ttcccttcgc ccgctccaac gatatatccg ctttgtggtc gctattgggg tagagcgctt
     5101 gggcgctgca catgtctgct tttgacgcaa agcgaagatc ggacagtgat ggaacgaact
     5161 cagaaccgag ccggacctct ccgacgaaca acgttccgac cgacacgatg gcggcgatgc
     5221 tgtctgttgc acgcaatcca gcgtataagc ctggaaggct tttcgcgctc ttagatgctt
     5281 tttatccggt tcccaaaggc aagacacttc gaccgacaac ctatctccct tatctcagct
     5341 acgcgccaag cgcttgggtg ctgccgctca aatttaccgg cggtgggttg agtgcgcctg
     5401 gcaaaatcat gttcgatgct gaaggtagtg cgtggacggg agtgaatttc attgttgggt
     5461 cgcaggcgtc agacgctctg tgggatggca acctgtcgaa attttcagcg aatggaaagc
     5521 ctctctcgcc acccaccacg ggatttacag gcgggggcgt agaaggtccg ggttttggca
     5581 cagcggttga tgccaatggc cgcgtgtggg tgacaagcac cggaagcaaa accatttcgc
     5641 ttttcgacaa agacggcaaa ccactctcac cgcaagatgg ctgtaacttt ggcggccagc
     5701 ttggggtcat gcaaggcatc atcgtcgtgc ctaac
//
LOCUS       DATDHO010000130         1665 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_450754, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000130 DATDHO010000000
VERSION     DATDHO010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1665
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_450754"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(559..>1665)
                     /locus_tag="VIY07_02425"
     CDS             complement(join(559..1427,1427..>1665))
                     /locus_tag="VIY07_02425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611153.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEY6380640.1"
                     /translation="TPAFKAQVALAAIKGDRTLAELAEQFDVHPNQITSWKAQLESGA
                     ADVFAPSGGTAAQPAVDVKSLHAKIGELTLENDFLGGRAHQGGIAERKAMIDRAHDLP
                     VSKQAGVLRISRGSVYYRPRPVPEAELAIMRRLDRLHLEFPFAGSRMLRGLLAAEGCK
                     IGRRHVKTLMRRMGIEALYRRPRTTQPEPGHKIYPYLLRGMEITRPNQVWAMDITYIP
                     MARGFVYLAVVLDWFSRRVLSWRVSITMEAAFCVETLEDALARHGKPDIFNTDQGSQF
                     TGAAFTGVLADNGITISMDGKGAWRDNVFVERLWRSVKYEEVYLHAYDGVSEARVSIG
                     RYLDFYNARRPHASLDGMTPDQAYFAPLPLRLAA"
BASE COUNT          320 a          517 c          506 g          322 t
ORIGIN      
        1 ttgcaagacg gccgaagagg gccgagcatg gtacaaagcc tgtggttcac gcatccgcaa
       61 gcgaccggtt accccactct tgaacatgta tagcagagtg ggcgttgtgc ggccaaatct
      121 gtggtgcgac gcactgcgct acgatattca gctccattga ggagtagacg acgatgcgga
      181 acgagatccg aacaccgttt tacgatctac cggaagaacg tcgaatagcg ttgaccaaag
      241 atgcgatctc acaacgccgc actctgctgt cgcgctggac cgcgctctcg cctccagaag
      301 cctcggattg gagggagcga gctgcgcgag ctgcatttca cttgcgcgaa tgcgattcgg
      361 ttgccgactt agggtgcggc acaatgcaat tgaagacata tctaccccca agggaccgga
      421 cttcgacgat cctctcgtgc cgaatgtgct gcggtcgcag cttaattcct actcactcga
      481 tccttcggta tatattctga ggtggtcccg gttgtctgaa cagaatttcc gcatcgataa
      541 gtggagcctc tgccggggtt aggctgccaa gcggagtggc agcggggcga agtaggcttg
      601 atcgggcgtc atgccgtcaa ggctcgcatg cggtcgtctt gcgttgtaga agtccaggta
      661 gcggccgatc gagacgcggg cctcgctgac accgtcgtag gcgtgcagat acacctcctc
      721 gtatttgaca ctgcgccaca gccgctcgac gaacacattg tcgcgccaag cgcccttgcc
      781 gtccatgctg atcgtaattc cgttgtcggc gagcacgccg gtgaaggccg cgccggtgaa
      841 ctgcgagccc tggtcggtgt tgaagatgtc cggcttgccg tggcgagcca gggcatcctc
      901 gagcgtctcg acacagaacg ccgcctccat ggtgatcgat acgcgccacg acagcacgcg
      961 acggctgaac caatcgagca ccacggccag atagacaaag ccgcgcgcca tcggaatgta
     1021 ggtgatgtcc atcgcccaca cctggttcgg ccgcgtgatc tccatgccgc gcagcagata
     1081 cgggtagatc ttgtggccgg gctcgggctg ggtggtgcga ggccgccgat agagcgcttc
     1141 tatccccatt ctccgcatca gcgtcttcac gtgacggcgg ccgatcttgc acccctcggc
     1201 ggccaacagg cctcgcaaca tccgcgaacc ggcgaacggg aactccagat gcagccggtc
     1261 gagacggcgc atgatcgcaa gctccgcctc cggcaccggc cgcggccggt agtagacgct
     1321 gccgcggctg atgcgcagaa cccccgcctg cttgctgacc ggcagatcgt gcgcgcggtc
     1381 gatcatcgct ttgcgctcag caatcccgcc ttggtgagcg cgccctctaa aaaatcattc
     1441 tccagcgtca gctcgccgat cttggcgtgc agcgacttca cgtcgacagc aggctgcgct
     1501 gccgtgccgc cgctaggagc gaacacatcg gcagctccgc tctcaagctg agccttccac
     1561 gatgtgatct gattgggatg gacatcgaac tgctcggcaa gctcggccag cgttcggtcg
     1621 cccttgatgg ctgcgagtgc cacctgagct ttgaatgccg gtgtg
//
LOCUS       DATDHO010000131         1785 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_253961, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000131 DATDHO010000000
VERSION     DATDHO010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1785
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_253961"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(399..980)
                     /locus_tag="VIY07_02430"
     CDS             complement(399..980)
                     /locus_tag="VIY07_02430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380641.1"
                     /translation="MTRALCHLLLLALLAFPSVVFAHRDDQYLQATLVAIEPSGVRVQ
                     INLTPGVAVVEQVLAEIDRDRNGAISKNEAAAYADSLKRDLTLRIDGRNLELKLTASE
                     FVPPEELRTGSGTIQMEFSAISGPLAAGLHRLTLENRHLTTISVYLINAAQPRFATVQ
                     ITRQKRNQNQSAGEIEFTFHPFRPKIAESGARS"
     gene            complement(977..1777)
                     /locus_tag="VIY07_02435"
     CDS             complement(977..1777)
                     /locus_tag="VIY07_02435"
                     /inference="COORDINATES: protein motif:HMM:NF023431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3500 domain-containing protein"
                     /protein_id="HEY6380642.1"
                     /translation="MFKRQGLRMGDLTKPQREAVLAVLAAALSSQGYEKILQIVEADE
                     VLKKSSGETIFGRDEYYVSFLGQPSTTEPWMVQFGGHHLGLNITLAGEQRTLAPSHTG
                     AQPAIYELEGKTVRPLGGETDKAFALLSSLDDSQRKQAILGFQMRDLVLGPGRDGQTI
                     QPEGIKGAALNDKQRQMLLDLASEWTGILHEAVATAKMDEMRKNIADTWFAWSGPTEK
                     GSAAYFRIQGPTVIIEYAPQRLGGDTTKHIHTIYRDPTNDYGVKWWKR"
BASE COUNT          361 a          514 c          528 g          382 t
ORIGIN      
        1 ggagccatgg gagaggggat tgccatcgat agtgccggca atctcttcac ggcagaagcc
       61 acagtgaggg gggtaacaaa gtacgtcaag gagtagagga cacgagcgga tcgctgccgc
      121 ttccgctcta aagcagaaac gctctcgaga gacctcggcc tctataatgt cagtgaaatt
      181 ccaagggcca aaggcgttgt gttactggga cctgttccgg cggcagcgga tcgagcccta
      241 ctgaaggaaa agaaaatagc cgagataacc gacaacaacg cacgactcag gcgtgacccc
      301 agctttcact cgacgcaatg actgttccga actgttccta aaaaactcct agtcggaagc
      361 aagccgaagt tgtcctgctc gttttcgccc catccacttc aagaccgcgc accggattca
      421 gcgatttttg ggcggaacgg atgaaaagta aattcgattt cccccgcgct ctggttctgg
      481 ttgcgtttct gtcgggtgat ctggaccgtg gcaaacctgg gctgcgcagc gttaatgaga
      541 tacacactga tcgtggttaa atgccggttt tcgagcgtga gcctgtggag accggccgcg
      601 agcggcccgg agattgcgga gaattccatc tgaattgttc ccgaaccggt gcggagctct
      661 tcaggcggaa cgaattcaga cgcggtgagt ttcaattcta agtttcgccc gtcgatgcgg
      721 agcgtgagat cgcgcttcag agagtcggca taggctgccg cttcgttctt ggaaatcgcg
      781 ccgttgcggt cgcggtcgat ctcggcgagc acctgttcga cgacagccac acccggcgta
      841 aggttgattt gcacccggac gccactcggt tcgatagcca caagcgtcgc ttgcagatac
      901 tggtcatcgc gatgcgcgaa aacgacggac ggaaacgcaa gtaacgcgag cagcagcaga
      961 tgacagagtg ctctggtcac cgcttccacc attttactcc gtaatcgttc gttggatcgc
     1021 ggtaaatcgt gtggatgtgc tttgtcgtgt cgccccccaa gcgctgcggg gcgtattcga
     1081 tgattaccgt cggcccttgg atgcggaagt aagcggcgct gcctttttca gttgggccgc
     1141 tccacgcgaa ccaggtatcg gcgatattct ttctcatctc gtccattttc gctgtcgcga
     1201 cagcttcatg caggatgccg gtccattcgc tggcgagatc cagcagcatc tggcgctgct
     1261 tgtcgttcag ggccgcgcct ttgattcctt ccggctgaat cgtctgcccg tcgcggccgg
     1321 gcccgagcac aaggtcgcgc atctggaaac caaggatggc ctgcttgcgc tgcgaatcgt
     1381 cgagcgaact aagcagggca aacgccttgt cagtctcgcc accgaggggg cgcaccgtct
     1441 tgccttcgag ttcgtaaatc gccggctgcg cgccggtgtg actaggggcc agcgtgcgtt
     1501 gctcgccggc aagcgtgatg ttgaggccga gatggtgccc gccgaactga accatccacg
     1561 gctcggtggt ggaaggctga ccgaggaacg agacataata ttcatcgcgc ccaaagatcg
     1621 tctcgccgct cgattttttc aacacctcgt cggcctcgac gatctgcaga atcttctcgt
     1681 acccctgcga actcaacgcc gctgccagca ccgccagcac ggcctcgcgc tgcggctttg
     1741 tgaggtcgcc catgcgcaag ccctgccgtt tgaagattgc tgtcg
//
LOCUS       DATDHO010000132         3500 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_105383, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000132 DATDHO010000000
VERSION     DATDHO010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3500
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105383"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..1693
                     /locus_tag="VIY07_02440"
     CDS             173..1693
                     /locus_tag="VIY07_02440"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY6380643.1"
                     /translation="MEDVFIVGGGPSGLFAACELARHGVRARVVDREPEPHQQARATV
                     IEPATLELLARAGVIDEFLHLAVHVHRSRVCGPGLLPIARGSFAGIDCAYEFQCCLPQ
                     WRTEEILLAHLERQGGSLERGTTVTSVEQGDDHLLLTLEGADSRRETVAARYLIGAGG
                     ARSITRSSMREGLEGETYAGRYVVADARLASPVAPGEGTVVVSPKGFVLLSPLPDDRW
                     IMFVDIDEAHAGIADPPASDAVAALVNERLGTNVGVHDVCWTSHFSMHKRMAPSLADG
                     RRFLIGDAGHLSSPIAGEGLNAGLMDAADLAWKLALVLRGRGRLLLLESYAIERSLAD
                     QHCLAVSDLVHGNVTKLIKACAGGVAPTPASPDAERDRALQRSRAMLDVSYAGSPLLG
                     ERLGEGIRRPDGPSPGERYPDRIALAGPRHQLLLFAAAPANLPRFRARWDGLVEVMDA
                     STAGLDAARAGVPGGGAVLIRPDGFIGFRAIPADPAGLDALAVHLATYLIEGGVSS"
     gene            complement(1974..3344)
                     /locus_tag="VIY07_02445"
     CDS             complement(1974..3344)
                     /locus_tag="VIY07_02445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013948869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HEY6380644.1"
                     /translation="MMGRLNHNQRQFFYSFCLDEAVPDDHLVREIAAVLDLSWVHREL
                     APFYPKLGRPSIDPELMIRMLIIGYVFAIRSERALCRDVHVNLAYRWLCGLSIEDKVP
                     DHSAFSRARHERFRDSDMFRRVFERVVEACIAAGLVGGEGFAVDASLIVADANKQRSI
                     PGSEWNKTCDPRGASRAMKEYLATLDDAAFGAASEVTPKFVSPSDPAAQWTGAMRGPA
                     FFAYADNYLVDVKFGIIVDVEASRAIRQAEVGAAKTMIERTQERFDLKPEYLAADTAY
                     GSAETLNWIVNEKKIAPHVPVIDKSKREDGTLSRSDFTFDKESNIYICPAGNTLTTTG
                     RIHGDHAIRYFASVVDCRACALKPKCCPNMPSRRIVRDVNEEVRDVARALAKTEAFEQ
                     SRRSRKRVEMLFAHLKRILRLGRLRLRGPLGAQDEFTLAAIAQNLRRLAKLVARPPPA
                     VNACVA"
BASE COUNT          645 a         1124 c         1073 g          658 t
ORIGIN      
        1 ggcatggcgc ccatatggct gcgaggccaa ccgaagtttc tgcggccaag aaccagtgaa
       61 agcgccgacg aaatcatcga atagagatca cgcttgctgc agcgcattcc aaagctttcc
      121 gctgaatgac gttggtcagc cagcccgcgt ctgggaccaa aaaggaggcg tcgtggagga
      181 cgttttcatt gtcggcgggg gcccctccgg gctcttcgct gcctgcgagc ttgcccgcca
      241 cggtgtccgc gcccgggtcg tggatcgtga gccggagcct caccagcagg cccgggctac
      301 ggtgatcgag cccgccacgc tggagctgtt ggcccgcgcc ggtgtcatcg acgagttctt
      361 gcacttggcc gtccacgtcc atcggtctcg cgtgtgcggg ccgggcctcc tgcccatcgc
      421 gcgaggcagc ttcgccggca tcgattgtgc gtacgagttc cagtgctgtt tgccccagtg
      481 gcgtaccgag gagatcctcc tcgcccacct ggagcggcag gggggttcac tcgagcgcgg
      541 aacgaccgtt acctcggtcg agcagggtga cgaccacttg ctcctcacgc tcgagggggc
      601 cgacagccgc cgggagaccg tggccgcgcg ttatctgatc ggcgcgggcg gggcccggag
      661 catcacccgg tcttccatgc gggaggggct tgagggcgaa acctacgcgg gacgctatgt
      721 cgtcgccgac gctcgacttg cttcgccggt ggcgccgggc gagggaaccg tcgtcgtcag
      781 cccaaaggga ttcgtcctct taagtccttt gcccgacgat cgctggatca tgttcgtcga
      841 tatcgacgag gcccatgccg ggatcgccga cccaccggca agcgacgcgg tggccgctct
      901 cgtaaacgaa cggctcggaa ccaacgtcgg cgtgcatgat gtgtgctgga cgtcccactt
      961 cagcatgcac aagcgaatgg caccctcgct cgcggatggt cgccgcttcc tcatcggtga
     1021 cgcgggacat ctctcgagcc cgatcgcggg tgaggggctg aacgccggcc tcatggacgc
     1081 ggccgacctc gcctggaagc tcgccctggt cctccgcggc cggggacgtc ttctcctgtt
     1141 ggaaagctat gccatcgagc gcagcctggc agaccagcac tgcctcgcag tctccgatct
     1201 cgtgcacggc aacgtgacaa agctcatcaa ggcctgtgcg ggcggtgtgg cgccgacgcc
     1261 agcctccccc gacgcggagc gcgatcgtgc gctccagcgc agccgcgcga tgctcgacgt
     1321 gtcgtacgcg ggaagcccgc tcctcggcga gcgcttgggc gaggggatcc gccggccgga
     1381 tgggccctcc cccggcgagc gctatccgga tcgcatcgca ctggcgggac cgcgccacca
     1441 gctgctcctg tttgcggccg cccccgcgaa cctgccccgc ttccgggccc ggtgggacgg
     1501 cctcgtcgag gtcatggacg ccagcacggc cggcctcgac gcggcccgcg ccggggtgcc
     1561 ggggggtggc gccgtactga tcaggcccga cggcttcatc ggcttccgcg cgatcccggc
     1621 cgaccctgcg ggcctcgacg ctctcgccgt tcacctcgcg acctacctaa tcgaaggggg
     1681 tgtgtcctca tgacggccgt cacggcgtgg tcacgggcaa aagagctccg gcgccgccag
     1741 gcaagtccca atgccgttgt tgcctgttcg cgaaacgcgc gtgactggct gattggcccg
     1801 gaggtcaaag tggctgtttg ctgcggtgca tatgtccgtt gctggcagat tttgttgcag
     1861 aagtctgcga tttcagttgc aagctgactg cctccatttg ctgaaacggc ttgttatttt
     1921 gctcctctgg gagcggtaac aaccccaccg acgatcctga tgctggcagt tggttaggca
     1981 acacatgcat tgactgctgg cggcggccga gcaaccagtt ttgccaggcg gcgtaggttc
     2041 tgtgcgatag cggcgagcgt aaactcatct tgcgcaccca atggaccgcg taaccgaagc
     2101 cgcccaagcc tcaagatgcg cttgaggtga gcaaaaagca tttcaacacg cttgcgactt
     2161 cggcgcgatt gctcgaaggc ctcggtcttt gccaatgcgc gtgcaacatc gcgaacctcc
     2221 tcgttcacat cgcgcacgat ccggcgcgat ggcatgttcg ggcaacactt gggcttgagt
     2281 gcgcaggctc ggcagtcaac aacagacgca aaatagcgga tcgcatgatc gccatggatg
     2341 cgcccggtcg tggtcagtgt gttgcccgct gggcagatat agatgttgct ttctttgtca
     2401 aacgtgaagt ctgatcgcga caaggttcca tcctcgcgct ttgatttgtc gataaccgga
     2461 acgtgcggcg cgatcttctt ctcattgacg atccagttga gtgtctccgc cgagccatag
     2521 gccgtatcgg cggcaagata ttccggcttg agatcgaaac gctcctgcgt tcgctcgatc
     2581 attgtcttcg ctgcaccgac ctctgcttga cggatggcac gagaggcttc gacgtcgaca
     2641 atgatgccaa acttgacgtc aacaaggtaa ttatcggcgt aggcaaagaa ggccggcccc
     2701 cgcattgcgc ccgtccattg cgcggccgga tcggacggcg agacaaactt cggggtcacc
     2761 tcgctcgccg cgccaaaggc cgcatcatcg agggttgcta gatactcttt catggcgcgg
     2821 cttgcgcctc gaggatcaca cgttttgttc cattccgagc ctgggatcga ccgctgctta
     2881 ttggcatccg ccacgatcag gctcgcatca actgcaaacc cttcgccacc gaccagcccg
     2941 gccgcaatac aggcctcaac gacacgctcg aatactcggc gaaacatgtc gctgtcacgg
     3001 aaccgctcat gacgggcgcg cgagaacgcc gaatggtctg ggaccttgtc ctcgattgac
     3061 agcccacaca accagcgata ggccaagttc acatgcacat cgcggcacaa tgctcgctcc
     3121 gagcggatcg caaacacgta gccgatgatc aacatccgga tcatgagctc cggatcaatc
     3181 gagggccggc ctagcttcgg gtaaaacggc gcaagctctc gatgcaccca ggaaagatcc
     3241 agaacggccg caatctcgcg aaccagatga tcgtccggaa ccgcctcatc gagacagaat
     3301 gaatagaaaa actgtctctg gttgtgattg agccgtccca tcatcgctcg cctccacagc
     3361 gaatcgcttt agagcaacgg aatcactatt cacaaaaatt gccaacgact tttgcaacaa
     3421 aatcggcacc aagcggccat tcgcggcgct gcaccatcgc ttccgcagtt gagtgaagac
     3481 cggaccaagc gcggaggtcg
//
LOCUS       DATDHO010000133         1599 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_105477, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000133 DATDHO010000000
VERSION     DATDHO010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1599
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105477"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(331..1452)
                     /locus_tag="VIY07_02450"
     CDS             complement(331..1452)
                     /locus_tag="VIY07_02450"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HEY6380645.1"
                     /translation="MVALIFFLLNLVASPFKPKSRLEAENAALRHQLIVLQRKVRGRV
                     QFTNSDRLFFIQLYRWCPSVLKAVMIVRPETVVRWHRAGLRRYWRWKSRGAGGRPQIP
                     AELRALIWRMSVDNRLWGAPHIHGELLKLGFAVAQSTVGKYMAKKGDPSGQSWGTFLR
                     NHAPHIAAMDLFVVPTIGFIQLYVLVIVRLARRELVWINVTAHPTAEWIAQQLTEAFP
                     WNEVPRYLIRDRDGIYGAAVTRRLRAMGIRDKPIAAGSPWQNGYVERLIGTIRRECLD
                     HMIIFGEAHLRRILGEYAAYYNGLRIHRSLDKDAPFHRVIEHLGVITSRPVLGGLHHQ
                     YRRISFSVHTGCDSRACGKLCRQRCAATSGTERVGTQPH"
BASE COUNT          332 a          490 c          468 g          309 t
ORIGIN      
        1 cttgggatcg ccagcggcca cttgcgcggc cttgacggcc tcagcaggca ttggggctga
       61 cgcgcttgat cgcttcttcg cagactttga catcgagatc ctccgttcgg ttgatggcgg
      121 cgtgtccgca ccaccgaagc cccatctcgg ccgttcagcc ggcggggcag gatctcggag
      181 cgcccttatg cgcccggaat agcgacagta ccgctccaat cgcagccgaa tgccagtcct
      241 ttctggataa tgttattgct cagttcgacg gcgtttgagc atgcaatgat ccagtttcgt
      301 ggcggcaata gttcacggaa tggaccccct ctagtgcggc tgggttccga cccgctcggt
      361 cccgcttgtt gccgcgcaac gctggcggca tagtttgccg catgcccgtg agtcgcaccc
      421 tgtgtgtacc gaaaaggaga ttctgcggta ttgatgatga aggccaccaa ggacgggccg
      481 tgatgtgatg acaccgaggt gttcaatcac gcgatggaat ggggcatcct tgtcaagcga
      541 gcgatgaatt cgcaacccat tgtaataagc ggcatactcg ccgagaatcc gacgcaggtg
      601 cgcctcccca aatatgatca tgtggtcgag acattcacgt cggatcgtgc cgatcagtct
      661 ctccacgtat ccattctgcc acggcgagcc cgcggcaata ggcttgtcgc ggatgcccat
      721 ggcccgtaat cggcgcgtga ctgcggcacc atagatcccg tcccgatcgc ggatcaggta
      781 gcgtgggacc tcattccagg gaaatgcttc cgtcagttgc tgcgcaatcc actctgccgt
      841 cgggtgcgca gtcacattga tccacacaag ctctcgccga gccagccgga caatgaccag
      901 aacgtagagc tggataaagc cgatggtcgg aaccacgaac aaatccatgg cggcgatatg
      961 cggcgcatga ttgcgcagga acgtgcccca gctctgacca gacgggtcgc ctttcttggc
     1021 catgtacttg ccgaccgtcg actgggccac cgcaaagccg agcttgagca actcgccatg
     1081 aatgtgcggt gctccccaaa gccgattatc cacgctcatc cgccagatta acgcccgcaa
     1141 ttccgcaggg atttgcggcc ggcctcccgc accgcgagat ttccagcgcc agtagcggcg
     1201 aagaccggca cggtgccagc gcaccacggt ctccggccgg acgatcatca cggccttgag
     1261 gaccgacgga caccaacgat acagctggat gaagaacaga cgatcgctgt tcgtgaactg
     1321 gacccgaccg cgcaccttgc gctgcagcac gatcagctga tgccggagcg cggcattctc
     1381 tgcttcaagt cggcttttcg gcttgaacgg cgaggcaacc aggttcaaga ggaagaatat
     1441 cagcgcgacc atcgcggccg acgataagcg attctgtcat caaatcaaac ggacgagatt
     1501 tcagtacaca caggtccgct ggacggcccg acctaggggc gcgtctttgc ccagcgccag
     1561 gtgcgtgcgg acctcattgt agtaggctgc ataagagga
//
LOCUS       DATDHO010000134         5732 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_204315, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000134 DATDHO010000000
VERSION     DATDHO010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5732
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_204315"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /locus_tag="VIY07_02455"
     CDS             <1..539
                     /locus_tag="VIY07_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEY6380646.1"
                     /translation="SPARFDFTKLESLNGHYIRSSDDAALIAAIEDLLPHIAGGHELA
                     SKMTPVLRAKLMAAMPGLKERAKTLVELFDASRFLWASRPIDVNEQAKAFLTDDAKAL
                     IGGLLPELEAISEWNTATVEGVVRPYAEHAGHKLGAVAQPLRAALTGRTTSPPIFDVL
                     AVLGRDESLARLRDQIAT"
     gene            732..2042
                     /gene="gltA"
                     /locus_tag="VIY07_02460"
     CDS             732..2042
                     /gene="gltA"
                     /locus_tag="VIY07_02460"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009364374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEY6380647.1"
                     /translation="MDAKTSAKNKTGTLTVGNNNWDLPILPGTIGPDVVDISKLYSQA
                     GMFTYDPGFTSTASCDSKITYIDGDEGILLYRGYPIEQLAEHGDFLETCYLLLYGELP
                     TAAQKADFDYRVTRHTMVHEQMSRFFQGFRRDAHPMAVMTGCVGALSAFYHDSTDISD
                     PHQRMVASVRMIAKVPTLAAMAYKYSIGQPFVYPKNELDYASNFLRMCFAVPTEDYKA
                     NPVLARAMDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGCACLWGPAHGGANE
                     AALNMLREIGSVGRIPEFVRRAKDKNDPYRLMGFGHRVYKHYDPRAKIMQKTCHEVLN
                     ELGIKDDPLLDVAMELEKVALHDDYFIEKKLYPNIDFYSGITLKAMGFPTTMFTVLFA
                     VARTVGWIAQWKEMIEDPKQKIGRPRQLYTGATRRDYVPISRRK"
     gene            complement(2049..3092)
                     /locus_tag="VIY07_02465"
     CDS             complement(2049..3092)
                     /locus_tag="VIY07_02465"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: protein motif:HMM:TIGR00747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEY6380648.1"
                     /translation="MTLSSRASITAVHGYLPPDLLTNAELARMVDTSDAWITERTGIK
                     ERHILRGEGLGTSYMAAEAVRGLLQKAGTKPDEVDLLICATTTPDMQFPSTANLICEM
                     VGLRNIGSFDVQAACSGFLYSLTIAAQFIASGAARKVVVVGADKMSSIIDYKDRATCV
                     LFGDAAGAVLLEPDEIGCGIMDALIHSDGSGMIHLHQKAGGSRMPATAETVANRLHYV
                     HQEGAAVYKFAIAKMAEVSSEIMARNNLRADMIDWLVPHQANKRIIESTAERMGVPME
                     KVMVTIHKYGNTTNATIPLCLWDYEPKLKRGDRMVLAAFGGGFTWAGAYVQWAYDGAT
                     APKMNGKGNGKGG"
     gene            complement(3148..4347)
                     /gene="lpxB"
                     /locus_tag="VIY07_02470"
     CDS             complement(3148..4347)
                     /gene="lpxB"
                     /locus_tag="VIY07_02470"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEY6380649.1"
                     /translation="MSPHIFLVAGEESGDRLGAALVAAIRQRTNGRAQFSCVGGAHMA
                     AAGVPSLFPLGDLAIIGFGAIPASLPKILRRIGETADAVISAKPDALIIIDSPDFTHR
                     VAKRVRARSSTIPIIDYVCPSVWAWRSGRARAMRTYVDHVLALLPFEPTVMKKLGGPP
                     CTYVGHPLTERLDDLRPKDLEQRLRLADPPLVLVLPGSRTGEIHRMAPVFGTAMARVV
                     EQFGPIEIVVPAVASLASTVRDAVSAWRVPARVITDHNDKHEAFRTARAALTKSGTST
                     LELALAGVPMVAAYRVLLVEAIAARFILKIPSVILANLVLGENVVPEFLQWHCTPKRL
                     AAALLPLLTDTPERRRQTESFRRLDGIMEVGKASPSDRSAALVLDIVGQKSRLSGEPA
                     ALGPATV"
     gene            complement(4344..5216)
                     /gene="lpxI"
                     /locus_tag="VIY07_02475"
     CDS             complement(4344..5216)
                     /gene="lpxI"
                     /locus_tag="VIY07_02475"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185435.1"
                     /note="LpxI, functionally equivalent to LpxH, replaces it
                     in LPS biosynthesis in a minority of bacteria; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase LpxI"
                     /protein_id="HEY6380650.1"
                     /translation="MNTRPAGGEQGPLAMLCGGGSLPLTVADKVASSGRPVLLFPLRG
                     AAEGLAVERYPHHWVHVGQIGKFLRLARAAGCRDVVFIGSLVRPSLWHVHPDLKGLSV
                     LPRVFAAYRGGDNHLLSGMGKLLEDEGLRLVGAHEVAPDILIHQGTFGRAQPSELDRG
                     DIALGLEYLRAAGKFDIGQAVAVAGRHILAVEAVEGTDAMLARVAEMRANGRLRARPG
                     TGTLVKAPKPAQDRRFDLPSIGPQTVEGVVRAGLAGIAVLAGSTIVAEPARLVELADR
                     NAIFVVGVPSGTEP"
     gene            complement(5213..>5732)
                     /locus_tag="VIY07_02480"
     CDS             complement(5213..>5732)
                     /locus_tag="VIY07_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012170232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-[acyl-carrier-protein]--UDP-N-
                     acetylglucosamine O-acyltransferase"
                     /protein_id="HEY6380651.1"
                     /translation="SEDGGGITEVGDNCFFMVGAHVAHDCKVGNHVVFANNVLLGGHV
                     EIGDRVVFGGGAAVRQFVRIGEGAMIVGLSGVRADVIPYGMVHGPLADLIGLNVVGMR
                     RRGLAKANIQRVRSAYRSLFFGEGEFRARVDQVASEYGDDALVGRIIEFIRAGKRPLT
                     MAVKRSGAEEEA"
BASE COUNT         1151 a         1862 c         1673 g         1046 t
ORIGIN      
        1 gttctccggc gcgtttcgac ttcacgaagc tcgagagcct caatggccac tatattcgct
       61 cgagcgatga cgctgccctg atcgctgcaa tcgaggacct cctgccacac atcgccggtg
      121 gacatgagct ggcaagcaaa atgaccccgg tgctgcgcgc aaagctgatg gcagccatgc
      181 ccgggctgaa ggagcgcgcc aagactttag tcgaattgtt cgacgcgtcg cggttcctgt
      241 gggcgagccg gccgatcgac gtcaacgaac aggccaaggc tttcctgacc gacgacgcca
      301 aggccctgat cgggggcctc ctgcccgaac tggaggcgat ctccgagtgg aatacggcta
      361 cggtcgaggg tgtggtgcgg ccttatgcag aacacgcggg tcacaagctc ggtgcggtgg
      421 cgcagccgct gcgggccgcc ctgacggggc gcacgacgtc gccgccaatc tttgacgttc
      481 tcgcggtgct cgggcgggac gaaagcctgg ctcgcttgcg ggaccagatc gcaacataaa
      541 agtttcactg atcgggcaaa gcggcaggac agccactata tccacgccaa caggcggcgc
      601 cgctatcttg cagcgcacac ttgaatggga tacgcacaaa gtggccggaa ctccaacgcc
      661 cgaccggcgt catgcctgcc cggccatgat gtttccacgc gcatcgctcg cagccaactg
      721 agggctcgac catggacgcc aagaccagcg ccaaaaataa aaccggcacc ttgaccgtcg
      781 gtaacaacaa ttgggacttg ccaattctgc ccggcacgat cggtcccgac gtcgtcgaca
      841 tttcgaagct ttacagccag gccggaatgt tcacctacga tcccggcttc acttcgacgg
      901 cgagctgcga ttccaagata acctacatcg atggcgacga aggcatcctg ctctatcgcg
      961 gctatccgat cgagcaattg gccgagcacg gcgacttcct ggagacctgc tatctgctgc
     1021 tttacggcga actgccgacc gcggcgcaga aagccgactt cgactatcgg gtcacccggc
     1081 acacgatggt tcacgagcag atgagccgat tcttccaggg cttccgccgt gacgcgcatc
     1141 ccatggcggt catgacaggc tgtgtcggcg cgctgtcagc gttctatcac gactcgaccg
     1201 atatctccga cccgcaccag cgcatggtcg cctcggtgcg catgatcgcc aaggtgccga
     1261 cgctcgcggc gatggcctac aagtattcaa tcggccagcc attcgtgtat ccgaagaacg
     1321 agctcgacta cgcctcgaat ttcctgcgca tgtgcttcgc cgtgccgacc gaggactaca
     1381 aggccaatcc ggttctcgcg cgcgccatgg atcgcatttt cattctgcat gccgaccatg
     1441 agcagaacgc ctcgacatcg acggttcggc ttgccggctc gtccggcgcg aacccgttcg
     1501 cgtgcatcgc cgccggctgt gcatgcctct ggggccctgc gcacggcggc gcaaacgaag
     1561 ccgctctcaa catgttgcgc gagatcggtt ccgtcggtcg catccccgag tttgtcagac
     1621 gcgccaagga caagaacgat ccctataggc tgatgggctt cggccaccgg gtctacaagc
     1681 actacgaccc acgcgccaaa atcatgcaga agacctgtca cgaagtcctg aacgaactcg
     1741 gcatcaagga cgatccgctt ctcgacgtgg cgatggagct ggagaaggtc gcgctgcacg
     1801 acgactattt catcgagaag aagctctatc ccaatatcga tttctattcg ggcatcaccc
     1861 tcaaggcgat gggttttcca accaccatgt tcacggtgct gtttgccgtc gcccgcacgg
     1921 tcggctggat cgcgcagtgg aaagaaatga tcgaggatcc gaagcagaag atcggcaggc
     1981 ctcgtcagct ctacacgggc gcgacgcgac gggactatgt cccgatctct cgccgcaaat
     2041 aatccgcgct aaccgccttt gccgttgcct ttgccgttca ttttcggcgc ggtcgcgccg
     2101 tcataggccc attgcacata ggcgccggcc caggtgaaac cgccgccgaa tgcagccagc
     2161 accattctgt cgccgcgctt gagcttcggc tcgtagtccc acaggcaaag cggaatagtg
     2221 gcattggtcg tgttgccgta cttgtggatc gtgaccatca ctttttccat cggcacgccc
     2281 atgcgctcgg cggtcgactc gataattctt ttgttggcct gatgcggaac cagccaatcg
     2341 atcatgtcgg cgcgcagatt gttgcgggcc atgatctcac tcgagacttc cgccatcttc
     2401 gcgatcgcaa atttatagac agcggcgcct tcctgatgga cgtaatgcaa tcggttggcg
     2461 actgtctcgg cagtcgccgg catgcggctg ccgcccgcct tttgatgcag atggatcatt
     2521 ccggacccat ctgagtggat taatgcatcc atgatgccgc agccgatttc atcgggctca
     2581 agaaggacgg cgccggcggc gtcgccgaac agcacgcagg tggcgcgatc cttgtagtcg
     2641 atgatcgagg acatcttgtc ggcgccgacg accacgacct tccgcgccgc gccgctggca
     2701 atgaattgtg ccgctatcgt gagcgagtaa agaaatccgg agcaggctgc ctggacgtcg
     2761 aaactgccga tattgcgcag gccgaccatc tcgcagatga gattggcggt ggacgggaac
     2821 tgcatatcgg gggtcgtagt cgcacagatc agcagatcga cctcgtccgg cttcgtgccg
     2881 gccttctgca acagtccgcg cacggcctcc gcggccatat acgacgtgcc caggccctca
     2941 cccctcagga tgtggcgctc ttttatgccc gtccgctccg tgatccaggc gtcactcgtg
     3001 tcgaccatgc gcgccagctc tgcgttggtg agcagatccg gcgggaggta tccatggaca
     3061 gcagtgatcg aggcgcggga ggaaagggtc aacggctggg atccggttcg aacaatgaca
     3121 tacgcctatc gggcaccatc cagcaagtca tacggtcgcc ggacctagag ccgccggttc
     3181 gcccgacaag cgtgacttct ggccgacaat atcgagaacc aaagccgcgc ttcggtcgct
     3241 tggactggcc ttgccaacct ccatgatgcc gtccagacgc ctgaaggatt cggtttgtcg
     3301 gcgacgttcg ggtgtatcgg tcaggagcgg cagcagtgct gcggcgagtc gtttaggagt
     3361 gcaatgccac tggagaaatt cgggtacgac gttttcgccg aggacgagat tggcgaggat
     3421 cacggaaggg atcttgagaa tgaaacgtgc tgcgatcgcc tcgaccagta gtaccctata
     3481 cgccgccacc atcggaacgc cggcgagcgc taactccagt gttgaggtgc ctgatttggt
     3541 cagagccgcc cgagcggtcc gaaacgcttc atgcttatcg ttgtggtcgg ttatcacccg
     3601 agcaggcacg cgccatgccg agacagcatc tcgaacggtg cttgcaagac ttgccaccgc
     3661 cggcacaaca atctcgatgg gaccaaactg ttcgacgacg cgagccattg cagttccgaa
     3721 aacaggcgcc atgcggtgga tttcaccagt ccggctgccg ggtaaaacca aaacgagcgg
     3781 cgggtccgcc agacgcaatc gctgctcgag atccttcggc cgtaagtcgt caagacgttc
     3841 agtcaggggg tgccccacgt aggtgcaggg cggcccgccg agctttttca tcaccgttgg
     3901 ttcaaagggc aacaacgcca acacgtgatc cacataggtc cgcatggctc gcgcgcggcc
     3961 agaccgccat gcccacacgg acggacagac atagtcgatg atcggaatgg tgctcgagcg
     4021 cgcccgcacg cgtttcgcta cgcgatgggt aaagtccgga ctgtctatga tgatcaaggc
     4081 atcaggcttt gcggatatga ccgcgtcggc tgtttcacca atgcgtcgca ggatttttgg
     4141 caaacttgcc gggattgcgc caaaaccgat gatcgcgaga tcacccaacg ggaaaaggct
     4201 cggcacgcct gcggccgcca tgtgagcacc gccgacgcag gaaaactgtg cgcgtccgtt
     4261 ggtccgttgc ctgatcgccg cgacgagcgc agcacccagc cgatcgccgg attcttcccc
     4321 ggcaaccaga aaaatgtggg gactcatggt tcggtcccgg agggcacgcc gacgacgaaa
     4381 atagcgttcc gatcggccag ttcaacgagc cgtgccggtt cggccacaat agtgctgccg
     4441 gcaagcacgg cgatgcccgc aagtcccgct cgaacgacgc cttcgaccgt ctgcggaccg
     4501 atcgacggca gatcaaatcg gcggtcctgc gcgggcttcg gagccttcac cagggtgccc
     4561 gtgccgggcc gcgcacgcag acggccgttg gcccgcatct ccgcgacgcg cgcgagcatg
     4621 gcatcggttc cttccaccgc ctccaccgca agaatgtggc ggcccgcaac cgctaccgcc
     4681 tgtcctatgt cgaattttcc cgccgcgcgc agatactcaa gtcccaacgc gatgtctccg
     4741 cggtcgagct ctgatggctg cgcgcgacca aaggtgcctt gatggatcag gatgtccggc
     4801 gcaacctcat gagcgccgac caggcgcagg ccctcgtcct cgagcagctt gcccatgccg
     4861 ctcagcagat gattatcacc gccgcgatag gccgcgaaaa cgcgcggcag cacactgagc
     4921 cctttgagat cggggtgcac atgccacagc gatggccgaa ccaatgatcc gatgaaaacc
     4981 acgtccctgc agccggccgc gcgcgccagc cgcagaaatt tgccgatttg accaacgtgg
     5041 acccagtggt gcgggtatcg ctcgaccgca aggccctccg cagcaccccg cagcggaaag
     5101 agcaacaccg gtcgtccgct gcttgccacc ttgtccgcca cggtcagcgg gaggctgccg
     5161 cctccgcaca gcatcgcgag cggaccctgc tccccgcctg ctggccgggt gttcatgcct
     5221 cctcttccgc cccgctgcgc ttgacggcca ttgtcagcgg gcgctttccg gcacgaatga
     5281 attcgatgat cctgccgacc aacgcatcgt caccatactc cgaagccact tggtcaaccc
     5341 gcgcccgaaa ttcaccctct ccgaaaaaca gcgatcgata cgccgatcga acacgctgaa
     5401 tattcgcctt ggccagaccg cgccggcgca tgccaaccac attgaggccg atcagatcgg
     5461 cgagcggccc atgaaccatg ccgtatggaa tgacgtcggc gcgcaccccg ctcaaaccca
     5521 caatcatggc gccctcgccg atgcggacga attgccgtac cgccgctccg ccaccgaaca
     5581 ccacacggtc gccgatctcc acgtgcccac cgagaagaac gttattcgca aacacgacgt
     5641 ggttccccac cttgcagtcg tgcgcgacat gcgcgcccac catgaaaaaa cagttgtcgc
     5701 cgacctcggt gatgccgcca ccgtcctcgc tt
//
LOCUS       DATDHO010000135         7627 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_105545, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000135 DATDHO010000000
VERSION     DATDHO010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7627)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7627)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7627
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105545"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..902
                     /locus_tag="VIY07_02485"
     CDS             <1..902
                     /locus_tag="VIY07_02485"
                     /inference="COORDINATES: protein motif:HMM:NF012457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HEY6380652.1"
                     /translation="NELSTFVQHGHKNGLLAPGLKLPPGQLNQVRHHHVLGHGLAVQA
                     IRAKGRPGTKVGPAEHLISTAPIIETAENIKAAANAMREFNAGYMTVMAEGKYTDAFL
                     AKQGADAPKFTDEELKIIGSPIDFIGTNIYMIHAYVQAIDAAPGYKVVAGGGFTPPPF
                     RPFPKGYPRAVYPGSNETIVFNLSPEAMYWGTRQLVNVWGAKEIFITESGMPTTDEGD
                     AGGDVDRIVWLRTLLTQLQRATAEGVPVRGWFHWSTMDNLEWIFGFEPKFGLIRVDTK
                     TLQRTPKLSAAWFRETARRNAVS"
     gene            complement(1222..2022)
                     /locus_tag="VIY07_02490"
     CDS             complement(1222..2022)
                     /locus_tag="VIY07_02490"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6380653.1"
                     /translation="MSVLNNPFDPAREVALVTGAGNGIGRAIAQALVGEGLRTVFADV
                     RQDTVAAAAATSPRPELAIPWVGDLAKRDACDALLADARSAVGQVTHFVHSAAPARRE
                     ADHALAVTDETWERMHAVNIDAGFHLARGLARQLIAAREPGSFLMLTSLHADTPRNLP
                     HYSTAKAALAMLVKELAKALGRFGIRVNALVPGAIAAGGFVADPSLARHIPLGRLGRS
                     EDLAPMALAVLSNRVSAYVTGAAFVVDGGLSLTNWFDPPAFDELNTRP"
     gene            complement(2135..2476)
                     /locus_tag="VIY07_02495"
     CDS             complement(2135..2476)
                     /locus_tag="VIY07_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380654.1"
                     /translation="MAVFHGILTQRLMVRPLEEFFLTDKRISASIKRLVPLLLHFSTI
                     SWFLGGLALIAAANWFEQNTKLATGLFVGSLYLFGALGNLWATRGRHPGWMLMAAALM
                     LIAFGLCRPVD"
     gene            complement(2589..3398)
                     /gene="eutC"
                     /locus_tag="VIY07_02500"
     CDS             complement(2589..3398)
                     /gene="eutC"
                     /locus_tag="VIY07_02500"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008851 - ethanolamine ammonia-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutC"
                     /protein_id="HEY6380655.1"
                     /translation="MNDDRDAAAPPDRSLQRAPDEDGLWAELRRLTPARIGLRRTGAS
                     LATGPLLDLQLAHARARDAVHEPLDEPRLMAELAGLGLPVLSVASASKDRQQYLTRPD
                     VGRRLASSAEATLSQHAKGNGYDVALVVADGLSARAVQVHARPVLAGIVPTLRAQGWG
                     IAPLVVVRQGRVAVGDAIANALHANCVAVLIGERPGLSAPDSMGAYLTWQPGPQTTDA
                     DRNCISNIRPEGIGYADAAFKLAYLMREMRSRRLSGVQLKDDSDLLLIERK"
     gene            complement(3403..4779)
                     /locus_tag="VIY07_02505"
     CDS             complement(3403..4779)
                     /locus_tag="VIY07_02505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutB"
                     /protein_id="HEY6380656.1"
                     /translation="MYSATIESHRYSFRDLANLLAKASPLRSGDQLAGLSADTDEERI
                     AAQLVLADLPLATFLHEQVVPYEACEVTRLIVDKHDQKAFAPFAHLTVGEFRDWLLSD
                     EATTSALATLAPGVMPEMAAAVSKISRLQDLMVMAAKCSVITRFRNTVGLPGRLSVRL
                     QPNHPTDDIRAIAASILDGLLLGSGDAVIGVNPATDSPERAHALLCMLDEIRVKLEIP
                     TQCCVLAHVTTALDLIRKGSPIDLVFQSIAGTEAANKSFGINLALLEEAQEAALSLRR
                     GTVGNNVMYFETGQGSALSANAHQGVDQQTLEARAYAVARQFNPLLVNTVVGFIGPEY
                     LFNGKQITRAGLEDHFCGKLMGVPMGVDVCYTNHAEADQDDADALLALLVASGVNFVM
                     GVPGADDVMLGYQSTSFHDALAMRDLLGRRPAPEFETWLERQGLMDPANRIRPRNMPN
                     RFRALLSA"
     gene            5684..6874
                     /locus_tag="VIY07_02510"
     CDS             5684..6874
                     /locus_tag="VIY07_02510"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY6380657.1"
                     /translation="MPTVALSARFVRRAQCPDGRKKIDFFDAGQRGFMLEVRCSGGKT
                     YYQRYTDERGRERQYKLGPADVLTLDQARRKARQVVAEALLGADPQERRRELRAVPQL
                     SSFVYERYLPHVRTYKSSWRTDETVLRIHILPTLGKLALDEIKSDDIADLINRMRENG
                     YACGTINRVIVILRFLYNLARKWKVAGVAGNPATGLTAGPDVQRNRFLSEEEAEVLVR
                     SINSDQNQTAARAIMLLLLTGARRNEITFAKWDYIDWKNRTLLVPKSKSGRPRVIALN
                     QSAIALLRATPRIDGSSFIFPSPINGLPSASLYFPWDRIRKRAGLSDVRLHDLRHSFA
                     SFLVNRGVSLYVVQGLLGHLHARTTQRYAHLTQETLSGAADLIQEVVRLGAAGTNQEM
                     AAEP"
     gene            7252..>7627
                     /locus_tag="VIY07_02515"
     CDS             7252..>7627
                     /locus_tag="VIY07_02515"
                     /inference="COORDINATES: protein motif:HMM:NF014577.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEY6380658.1"
                     /translation="MGFYYIPGTDMCIKIGGWVRAEAAYGVNGSSTRVTQGDVNNRFT
                     NDLWYRVRGYITADARSQTEYGTVRGYLALGISTDTLLDPPQTFNANRAFIQWAGLTF
                     GRAQSFFDFYSQAAVGYLGFAPN"
BASE COUNT         1565 a         2222 c         2303 g         1537 t
ORIGIN      
        1 tcaacgagct gagcaccttc gtgcagcatg ggcacaagaa cggcctgctc gcgcccgggc
       61 tcaagctgcc acccggtcag ctcaaccagg tccgtcacca tcatgtgctg ggtcatggcc
      121 tcgcggttca ggcaatccgc gccaaaggta gacccggcac caaggtcggg cctgccgagc
      181 acctgatcag tacggcgccc atcatcgaaa cggcggagaa catcaaggcc gccgcgaacg
      241 cgatgcggga gttcaatgcc ggctacatga ccgtgatggc ggaaggcaag tacaccgacg
      301 cgttcctcgc caagcaaggc gcggacgcgc cgaagttcac tgacgaggag ctgaagatca
      361 tcggcagccc gatcgacttt atcggcacca acatttacat gatccacgcc tacgtgcagg
      421 cgatcgacgc ggcgccggga tacaaggtcg tcgcgggcgg tgggtttacg cccccgccgt
      481 tccggccgtt tccgaaggga tatccgcgtg cggtgtatcc gggctcgaac gaaacgattg
      541 tcttcaacct cagtcccgag gcgatgtact gggggacgcg ccagctggtg aacgtctggg
      601 gcgccaagga gatcttcatc accgagagcg gcatgccgac caccgacgag ggcgacgccg
      661 ggggcgatgt cgaccgtatt gtgtggctgc gcacgttact aacccagctt cagcgggcga
      721 cggctgaggg tgtgccggtg cgcggttggt tccactggag cacaatggac aacctcgagt
      781 ggatcttcgg gtttgagccc aagttcggac tgatccgggt cgatacgaaa acgctgcagc
      841 ggacacccaa gctgagcgcc gcgtggttcc gcgaaacggc gcggcgcaac gcggtttctt
      901 aacggaacag cccagtccgc ttttggccca aagcggacat cgagttgcac tgctgctttt
      961 gactcaaagc gggacattga ggtcaggacc ttttgcttcc ttggcctatg atcaattcgt
     1021 tgccaccaat ctgacttgat agcttgcgtt aacagacgcg tttgcacaga atttcggtgg
     1081 aaagcaatgc acaggcttgc tcttggcgta cttgtccttg cgagcctgtt gggcgaggcg
     1141 ttgccaatct gagccgacca aagttcagcg gaccaagcgc gagaagaaaa tgcttatgcg
     1201 gttgggctgc aagcgtatct ctcatgggcg tgtgttcagt tcgtcgaacg ctggggggtc
     1261 gaaccagttc gtcagtgaca gacccccgtc gacgacaaag gcggcgccag tcacgtaggc
     1321 cgatacccgg tttgacaaca ccgcgagggc catgggcgcg agatcctcac tgcggccgag
     1381 gcgccctaac ggaatatgac gcgccaacga gggatcggca acgaagccgc ctgcggctat
     1441 ggcgccgggc accagggcgt tgacccggat cccgaaacgg cccaacgctt tggccagttc
     1501 tttaaccagc atcgccaatg ctgccttcgc cgtgctgtag tgtggcaggt tgcgtggtgt
     1561 gtcggcatgc agcgaggtca gcatcagaaa tgagccaggt tcacgggctg cgatgagttg
     1621 acgagcgagc ccgcgagcga ggtgaaaacc ggcgtcgatg ttgaccgcat gcatccgctc
     1681 ccatgtttcg tcggtcacag ccagcgcgtg atcggcctcg cgccgcgcag gcgcagcgct
     1741 atgtacgaaa tgtgttacct gtccaacagc tgaccttgca tcggccagca gcgcatcgca
     1801 tgcgtcacgt tttgcgaggt cgccgaccca cggaattgct aattcggggc ggggtgaggt
     1861 ggccgccgcg gcggcaaccg tatcctgacg cacgtcggcg aacacagttc gcaaaccttc
     1921 gccgaccagg gcttgagcga tggcacggcc gatgccattc cccgcaccgg tcactaaggc
     1981 tacttcgcgc gcggggtcga aaggattgtt cagcacactc atgttcgttg ctcacagcag
     2041 aggggattgc actaactgta acttgttcca ggcacggcgc acgtatctcg ggttggcaaa
     2101 ctttgaagtt ctgctagacc cacttcggat cgcctcagtc aacgggtctg caaaggccga
     2161 aggcaatcag catgagcgcg gctgccatga gcatccagcc aggatggcga ccgcgcgtcg
     2221 cccaaaggtt gccgagagcg ccgaacaaat agaggctgcc aacgaacaga cccgtcgcga
     2281 gctttgtatt ctgttcgaac cagtttgcag ccgcgattaa ggcgagtccg ccgaggaacc
     2341 agctgatcgt gctgaaatgc aagagcagcg gcacgagtct cttgatcgaa gcggatatcc
     2401 gcttgtccgt gagaaaaaac tcctcaagcg gtctgaccat aagccgttgg gtcaggatgc
     2461 cgtgaaatac cgccacacag catccgatga gtccggccat tcccaaggca gcatcttgcc
     2521 aattcgcgcg catacacctt tgaactttca aggttgccga tcgacataga gaaaattgaa
     2581 gacctcagtc actttcgttc gatcagcagc agatctgaat catccttgag ttgaacgccc
     2641 gaaaggcggc gggagcgcat ttcgcgcatc aaatatgcga gtttgaaggc agcgtcggca
     2701 tatccgatgc cctcgggtcg gatgttggag atgcagttgc ggtccgcatc cgtcgtctgc
     2761 ggaccgggct gccaggtcag gtacgctccc atgctatcgg gtgccgacag gcccgggcgc
     2821 tcaccgatga gaacggctac gcaatttgcg tgaagcgcgt tggcaatggc atcgccgacc
     2881 gcaacccgtc cttgacggac gacgaccagc ggagcgatcc cccagccttg ggcgcgcaat
     2941 gtgggcacga tgccagccag gacgggccgc gcgtgcacct gtaccgcgcg tgcagacagg
     3001 ccgtcggcga cgacgagcgc gacgtcgtaa ccgttgcctt ttgcatgctg cgaaagcgtc
     3061 gcctcggcac ttgacgcaag gcggcgcccg acgtccggac gtgtcaggta ctgttgccga
     3121 tctttggacg cactagcgac tgaaaggacc gggagcccga gcccggcgag ttcggccatc
     3181 agccgcggtt cgtcgagtgg ctcgtgcacc gcatcgcggg cacgggcgtg agcgagctgc
     3241 aagtcgagca gcggcccagt cgcaagcgat gcgccggttc tcctgagccc gatccgtgcg
     3301 ggagtcagtc ggcgcaactc cgcccacagc ccgtcctcat ccggcgcgcg ctgtaagcta
     3361 cggtcgggcg gagcggcggc atcgcggtcg tcgttcatga gttcaagccg aaagcagcgc
     3421 acggaaacgg ttgggcatat tgcgcggacg gattcggttc gcggggtcca tcagaccctg
     3481 ccgctcgagc catgtctcga attccggcgc cggacgacgg cccagcagat cacgcatggc
     3541 aagggcatca tggaatgagg tgctctggta gcccagcatc acatcatcgg cgcccggtac
     3601 gcccatgacg aaattgacgc cactcgcgac caacagggcc agcagtgcat ccgcgtcgtc
     3661 ctgatccgcc tcggcgtggt tggtataaca gacgtcgacg cccatcggca cgcccataag
     3721 cttgccgcag aaatgatcct ccaatccagc gcgtgtgatt tgcttgccgt tgaacagata
     3781 ttcgggtccg atgaaaccga cgaccgtgtt gaccaatagc ggattgaatt ggcgcgctac
     3841 cgcataagcg cgcgcctcga gcgtctgctg gtcgaccccc tgatgcgcgt tcgccgaaag
     3901 ggcgctgccc tgaccggtct cgaaatacat cacgttgttg ccgaccgtgc cgcgccgaag
     3961 ggatagggca gcttcttgag cctcttccag gagagcgaga ttgatgccga agctcttgtt
     4021 ggctgcttca gtcccggcga tcgattgaaa gacgagatcg attggcgagc ccttgcggat
     4081 cagatccagc gctgtcgtta catgcgccag cacgcagcat tgtgttggga tctcgagctt
     4141 gaccctgatt tcatcaagca tgcacagcag agcgtgtgcg cgctcaggac tgtcggtcgc
     4201 agggttgacg ccaatgacgg catcccctga gcccagaagc aagccatcga ggatgctggc
     4261 cgcgatggct cgtatgtcat cggtcggatg attgggctgt aggcgcaccg acaggcggcc
     4321 aggcagaccc acggtgttgc ggaaccgggt tatcacggag cattttgcgg ccatgaccat
     4381 cagatcctgc aggcggctga ttttgctgac cgcggccgcc atctccggca tcactccggg
     4441 cgccaatgtg gccagtgccg atgtcgtcgc ctcatccgac agaagccagt cgcgaaactc
     4501 gccgacggtt agatgcgcaa acggcgcgaa ggctttctgg tcgtgcttgt ccacgatgag
     4561 gcgcgttacc tcgcaggctt cgtaggggac aacttgctca tgcaggaacg tggctaacgg
     4621 caggtcggca agcacaagtt gggcggcgat acgctcttcg tccgtgtccg cggaaagacc
     4681 ggccagttga tcgccgctgc gcaacggcga tgccttcgcc agcaaattcg caagatcgcg
     4741 aaagctgtag cggtgagatt cgatcgtagc ggagtacata gcgagcccag atagttgttt
     4801 tgacagcgga ttatatcggc agtcgcaacc ttgaaaaaca cgagttcgat cgaattcgct
     4861 cctggcccaa gtggagacgt cgctcgctga cgatgtttgc cttcagagga aaccatccac
     4921 gaaattgtgg ttcccagcta tgtccacatc cacctgtggc gacgtgcaga ttttgatgac
     4981 ttaagtccgc atttggcagt agacatcact gacatgactg ccgatggcag gccttcttct
     5041 tttattttgg cattggaggc gcgccatatt cacagtaatt tcctgggacg tctgggtagc
     5101 ggttgcgatt gctgctgtag cgattgtttt cgcagtgctt tttgaacaat cgccgctgtt
     5161 ggtattcatc ctcgtaggtt cgtctctatg cgcctacatc gcaatccgaa accggttcga
     5221 tgacgatcga tgagccttcg cgccactatt gcgccgttgg tgcaaatcgg cgctctgaga
     5281 tcagtcagct ggcgtcaaat tccgatcgac gacggtggag tggacgctgt tcaatcagcg
     5341 caatcaatcg ccgacaagtc tttctgctcg aagtgaacgc tcacatcgca gcggcgcgca
     5401 aacttcgcga atacattttt ctggcgctgt aattgttgcc ggcgatgtaa atcctctagt
     5461 cggatgacgg ctcataaaac aattgtgagt gttgttcgga gcattgtctg ttgacggcgc
     5521 gcgcacgaga atatttttta gtatgagaag atcacataat atgatttgta cttgcgcact
     5581 gctccctatt tctgtcgctg cggacaaagt cattctgata atattttcac ttacgcaagg
     5641 ccttaaaaac aaacgcatgt tgcgccatag gatgtaaaaa ttcatgccga cggttgcgtt
     5701 gtcagcgcgt ttcgtgcggc gcgcccagtg tccggacgga cgaaagaaaa tcgatttctt
     5761 cgacgcaggt cagcgcggct ttatgctgga agtgcggtgc tcaggcggca agacatacta
     5821 tcagcgctat accgatgagc gcgggcgcga gcggcaatac aagcttgggc ccgccgatgt
     5881 gctgacgctt gaccaggccc ggcgaaaggc ccgccaggtc gtcgcggagg ccctgctcgg
     5941 tgcggatccg caggaaaggc ggcgcgaact gcgggcggtg ccgcagctca gctctttcgt
     6001 gtatgagcgc tatctgcccc atgtacgcac ctacaagagc agctggcgga ccgacgagac
     6061 ggttttgcgc atacacatcc tgccgacgct gggcaagctc gctctcgacg agatcaagag
     6121 cgatgacatt gctgatttga tcaatcgcat gcgggaaaat ggctatgctt gcggcaccat
     6181 caaccgcgtc atcgtgattt tgcgcttcct gtataatttg gcccgcaagt ggaaggtggc
     6241 gggggtcgcc gggaatccgg caaccggtct gaccgcgggt ccggatgtgc agcgcaatcg
     6301 cttcttgagc gaagaggaag cagaggttct cgtacgttcg atcaacagcg accaaaatca
     6361 gactgctgcg cgcgcaatca tgttgctcct gctcacgggc gcgcgccgta acgaaattac
     6421 gttcgccaag tgggactata tagactggaa gaacaggaca ctgctcgtgc cgaaatccaa
     6481 gtcagggcgc ccgcgcgtga tcgccctgaa tcagtctgcg atcgcgctct tgagggcgac
     6541 tccgcgcatt gacggaagtt ccttcatctt tccgtcgccc atcaatggcc tcccgtccgc
     6601 ctcattgtat tttccgtggg acaggattcg caaacgcgcc ggtctcagcg atgttcgttt
     6661 gcacgatttg cgtcattcgt tcgcgagctt cctggtcaat cgaggtgtgt ccctctatgt
     6721 cgtccaggga ctgctggggc acttgcatgc gcgaacgacg cagcgctatg cgcacctgac
     6781 gcaggaaaca ttgagcggag ccgctgattt gatccaggag gttgtcaggc ttggcgccgc
     6841 cgggaccaat caggaaatgg ccgccgagcc atgaatccat ccgccattgg gtgaagcggg
     6901 acgccgcgtc acgcgcacat gtgcagcgcg agcagccggc cagaacaact gtctccgtcg
     6961 tcaatactcc aacgttgaaa gatccaatct ttcaattgtg ccaaggctat tggcggtcgc
     7021 tgacgtatca gcccaaacgg ccaacccaga gcatacctaa cacacgctcg gtgtatgatt
     7081 tctagattct tgaatcccct ggaattgtcg aacaaggtca cctcgctgcc ttaggtcaaa
     7141 acagcatctg gctcggcagc gggactcgtt gcggtagctg gggcgcaggc agccgatctt
     7201 cccgtaaagg ccaagccggt ccagtacgtg aagatttgca gcctgtacgg ggtgggtttc
     7261 tattacatcc ctggcactga tatgtgcatc aagatcggcg gctgggtgcg cgccgaagcg
     7321 gcctacggcg tgaacggttc gtcaacccgc gtcacgcagg gcgacgtgaa caaccgtttc
     7381 actaacgatc tgtggtatcg tgtccgcggc tacatcaccg cggatgctcg cagccagacc
     7441 gaatatggga cggtgcgcgg ctatctcgcg ttgggtatca gcaccgacac actccttgat
     7501 ccgccgcaga cattcaacgc caaccgcgcc ttcatccaat gggccggcct caccttcggc
     7561 cgtgcgcagt cgttcttcga cttctactcg caggcagctg tgggatactt ggggtttgcc
     7621 ccgaact
//
LOCUS       DATDHO010000136         4598 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_402873, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000136 DATDHO010000000
VERSION     DATDHO010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4598
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_402873"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1904)
                     /locus_tag="VIY07_02520"
     CDS             complement(<1..1904)
                     /locus_tag="VIY07_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEY6380659.1"
                     /translation="MANFKIDVDADGMALVTWDMAERSMNVINTSVIEELGALVDKVA
                     ADAAIKGVVVTSGKEAFCGGADLTMLEGMGAVFADLVRTKGEEAAAAFVFDESRKLSQ
                     FYRRIETSGKPWVCALNGTAMGGGFEFALACHHRVAADNPKTRLGLPEVKIGLFPGAG
                     GTQRVARMLPPADALQFLLKGDQLKVDRAKAMKLIDAVVPQADLIKAAKDWIKVGGKA
                     KAPWDTEGFRLPGGPVYSKAGMMTFPAANAIYRRETYDNYPAARAILQVVYEGLQVPF
                     DMALRIESRWFAKILRSPEAAAMIRSLFVSMQDLNKGARRPANEPPTRLKKIGVVGAG
                     FMGAGIAQVSAAAGLQVALIDRDQEAAEKGKAGLHKALSDRVMKGRMKGAERDELLAR
                     ITPTADYGALKDCDLVIEAVFEDRKVKSEVIAKIQAVIGDNVILGSNTSTLPITSLAS
                     DFKDPTRFVGIHFFSPVDRMMLVEIILGKQTGSKALAVVLDYVRAIRKTPIVVNDSRG
                     FYTSRVVGTYIREGHLMLTEGVPAAMIENVGRMAGMPVGPLALNDEVAVDLAWKILKA
                     TEADLGAKAVDPRQKKLLEEIVEKRGRLGRKNGKGFYDYPANGPKKLWPDLVDLQPKK
                     LLAPDKIDVE"
     gene            complement(1971..2429)
                     /locus_tag="VIY07_02525"
     CDS             complement(1971..2429)
                     /locus_tag="VIY07_02525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6380660.1"
                     /translation="MPKIDIDKIPIDTSTGYPPPFNKAVEGRSRKRLARAGGLTQFGV
                     NVCTLKPGAASSQRHWHEGEDELVYVLEGEVVLREDGGDIVLQPGDAAAWKAGVANGH
                     CLINRSDRDAVFIEVGTRASSERAHYSDIDMMVVRDEKGARYTRKNGEPF"
     gene            complement(2431..3639)
                     /locus_tag="VIY07_02530"
     CDS             complement(2431..3639)
                     /locus_tag="VIY07_02530"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEY6380661.1"
                     /translation="MPEAFIYDHVRSPRGRGKADGSLHEVTALNLAAQTLAAVKDRNK
                     LDPALVEDVVLGCVDPVGEAGGDIARASALVAGFGDSVPGVQINRFCASGLDAVNFAA
                     AEVMSGQHEMTIGGGVESMSRVGIGASGGAWPVDPSIAVTTYFLPQGISADLIATKYG
                     FSRDDVDAYAVESQKRAAKAWDEGRFKHSIVPVKDVNGLTILAKDEHMRPGTTMQTLA
                     ALQPSFVQMGEMAGFDAVAVQRYPEVEAVNHVHTPGNSSGIVDGAAAVLIGSKAAGKA
                     AGLKPRARIRQFANVGSEPSIMLTGPIPVTEKVLKRAGMTKKDIDLWELNEAFASVVL
                     RYMQAFDISHEKINVNGGAIAMGHPLGATGAMILGTVLDELERRDKETALVTLCIGVG
                     MGTATIIERV"
     gene            complement(3665..>4598)
                     /locus_tag="VIY07_02535"
     CDS             complement(3665..>4598)
                     /locus_tag="VIY07_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008872169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6380662.1"
                     /translation="EAVINREFALAGFDTFGAPLHSGIVAPYILHYGTEEQKKRWLPK
                     LATGELVGAIAMTEPGTGSDLQGIRTSAKKSGNGYALNGSKTFITNGQHANLVVVVAK
                     TDPKAGAKGTSLFVVETDEAQGFRRGRKLKKLGMDAADTSELFFEDVQLPASSLLGTE
                     EGQGFYQLMKELPQERLIVAIHAVAMMERALALTIDYVKQRKAFGQAIIEFQNTQFEL
                     AECKTEATIAKVFLDHCIERHVGGQLDTVTASMAKYRLTDTQGKVIDRCLQLFGGYGY
                     MDEYPISRMYRDARVLRIYAGTNEIMKLLIARSL"
BASE COUNT          834 a         1449 c         1333 g          982 t
ORIGIN      
        1 tcctcgacgt cgattttgtc cggcgcgagc aatttcttcg gctgcaggtc aacaaggtcc
       61 ggccatagtt ttttcggtcc gttggccggg taatcataga atcccttgcc gttcttgcgg
      121 ccaaggcggc cgcgcttctc aacgatctct tccagcaatt tcttttgccg cggatcgacc
      181 gcctttgcgc caagatcggc ctcggtagcc ttgaggatct tccacgcgag gtcgaccgca
      241 acttcgtcgt tgagggcgag tggtccaacc ggcatcccgg ccatgcggcc gacgttctct
      301 atcatcgccg cgggcacacc ttcagtcagc atgagatgcc cttcccggat gtaggtgccg
      361 acgacgcgcg aggtgtaaaa gccgcgggag tcattgacca cgatcggtgt cttgcgaatt
      421 gcacggacgt aatcgagaac aacggccagc gctttgctgc cggtttgctt gccgagaatg
      481 atctcgacca gcatcatgcg gtcgacgggc gagaaaaagt gaatgccgac aaaccgcgtc
      541 gggtccttga agtcggaagc gagcgaagtg atcggaagcg tcgatgtgtt cgagccaaga
      601 atcacgttgt cgccgatcac tgcctgaatt tttgcgatga cctcggactt gaccttgcga
      661 tcctcgaaca cggcttcgat aacgagatcg caatctttca gcgctccgta gtcggccgtg
      721 ggcgtgatgc gggccagcag ctcgtctcgc tctgctccct tcattcgccc tttcatcaca
      781 cggtcgctca gcgccttatg caggcccgcc ttgccctttt cagcggcttc ctggtcgcga
      841 tcgatcagcg ccacctgcag cccggcggcc gcgctgactt gcgcgatccc ggcgcccatg
      901 aagcccgcac ccaccacgcc gatctttttc aggcgtgtcg gcggctcgtt cgccggacgc
      961 ctggcacctt tgttgaggtc ctgcatcgac acgaaaagcg agcgaatcat cgctgcggct
     1021 tccggcgagc gcaggatttt ggcaaaccag cgcgattcga tgcgcagtgc catgtcaaag
     1081 ggcacctgga gcccttcata gacgacctga agaatggcac gtgccgccgg atagttgtca
     1141 taggtctcgc gacggtagat ggcgttggcg gcgggaaagg tcatcattcc cgccttcgaa
     1201 tagaccgggc cgcccggcaa tcggaaacct tcggtgtccc agggcgcctt ggccttcccg
     1261 ccaaccttga tccagtcctt ggccgccttg atcagatccg cctggggcac cacggcgtcg
     1321 atcaatttca tcgccttggc gcggtccacc ttgagctgat cgcccttgag cagaaactgc
     1381 agcgcgtcgg ctggcggaag catgcgggcc acgcgctggg tgccgccggc gccgggaaac
     1441 aatccgatct tgacctcggg caggccgagt cgagtcttcg gattgtcggc tgccacccga
     1501 tgatgacagg caagcgcgaa ttcgaagccg ccacccatgg ccgtgccatt gagcgcgcat
     1561 acccacggtt tgccgctcgt ctcgatacgc ctgtaaaact gcgagagttt acgactttca
     1621 tcgaatacga aagcagcggc ggcctcttcg cctttcgtgc gcaccagatc ggcgaacaca
     1681 gcgcccatgc cctcgagcat cgtaaggtcg gcgccgccgc agaaggcctc cttgccggag
     1741 gtgacgacga cgcctttgat ggctgcgtcg gcggcgactt tgtcaaccag cgcgcctaat
     1801 tcctcgatca cgcttgtatt gatgacattc atggagcgct cggccatgtc ccaggtcacg
     1861 agcgccatgc cgtccgcatc gacatcgatc ttgaaattcg ccatcgccgg ctcctgtttc
     1921 atctgcgcat gatcacttcg aaaccgatct cggcttttcg atgtgcatgc ctaaaaaggt
     1981 tcgccatttt tcctcgtgta acgtgcgccc ttttcgtcgc gcacgaccat catatcgatg
     2041 tcggaataat gcgcgcgttc ggacgaggca cgtgttccga cctcgataaa gaccgcatca
     2101 cgatccgagc gattgatcag acaatgtccg ttggccacgc ccgccttcca ggcggccgca
     2161 tcccccggct ggagcacgat gtcgcctcca tcctctcgca acaccacctc tccttccagc
     2221 acatagacga gttcgtcctc gccctcatgc cagtggcgct gcgaggacgc ggcgcccggc
     2281 ttgagcgtgc agacgttgac gccgaactgc gtgagacccc cggcgcgggc gagccgcttg
     2341 cggctgcgcc cttccacggc cttgttgaag ggcggcggat atcccgtcga cgtgtcgatc
     2401 ggaattttat caatgtcgat tttcggcatg ttaaacgcgt tcgataatcg tggctgttcc
     2461 catgccgacg ccgatgcaca atgttacgag cgcggtttcc ttgtcgcgcc tttccagttc
     2521 atcgagaacg gtgccgagga tcatcgcacc agtggcgcca agtggatggc ccatggcaat
     2581 ggcgccacca ttcacgttga tcttctcgtg cgaaatgtcg aacgcctgca tgtagcgcaa
     2641 caccaccgag gcaaatgcct cgttgagctc ccacagatcg atgtcctttt tcgtcatgcc
     2701 ggccctcttc aggacttttt ctgtcacagg gattggaccg gtcagcatga tcgatggctc
     2761 ggaacccaca ttggcgaact gccggatcct ggcgcgtggc ttcaggcccg cggccttgcc
     2821 cgcggctttg ctgccgataa gcacggcggc ggcgccgtcg acaattccgg aggaattgcc
     2881 gggcgtgtga acgtgattga ctgcctcaac ctcgggataa cgttgcacag cgactgcgtc
     2941 gaagcccgcc atctcgccca tctgcacaaa agaaggctgc agggccgcca gcgtctgcat
     3001 ggtcgtgccc ggccgcatat gctcgtcttt ggccagaatt gtcaggccgt tgacgtcctt
     3061 caccgggaca atggaatgtt tgaagcgtcc ctcgtcccag gccttggcgg cgcgtttctg
     3121 gctttcgacc gcgtaagcat cgacgtcatc gcgcgaaaat ccgtatttcg tcgcaataag
     3181 gtcggcggaa atgccctgtg gcaggaaata cgtcgtcacc gcgatggaag ggtcgaccgg
     3241 ccaggcgcct cctgatgcgc caatgccgac gcggctcatc gattcaactc cgccaccgat
     3301 tgtcatctcg tgctggcccg acatgacttc ggcagctgca aaattcaccg catcgaggcc
     3361 ggacgcgcaa aagcggttga tctgcacacc cggcacgctg tcgccaaagc ctgcgaccag
     3421 tgccgacgcg cgcgcaatat cgccgcctgc ttcgccgaca ggatccacgc aaccaagcac
     3481 gacatcctcg acgagcgcag ggtcgagctt gttgcgatcc tttactgcag caagcgtctg
     3541 ggcagcgagg ttgagtgcgg ttacctcgtg cagcgatccg tcggccttgc cgcgcccgcg
     3601 cgggctgcgg acgtgatcgt agatgaatgc ctctggcatg gggactctcc ggtatgggtg
     3661 cgcgtcaaag gctgcgcgcg atcagcaatt tcatgatctc gttggtgccc gcgtagatgc
     3721 gcaagacgcg cgcatcgcga tacatgcgcg agatcgggta ttcatccata tagccatagc
     3781 caccgaacaa ttgcaggcat cggtcgatca ctttgccttg cgtgtcggtg agtctgtact
     3841 tggccatgga ggcggtgacg gtatcaagct ggccgccgac atgccgctca atgcaatggt
     3901 ccagaaaaac cttggcgatt gtcgcctcgg tcttgcactc ggccagctcg aattgggtgt
     3961 tctggaactc gatgatcgcc tgaccgaagg ccttgcgctg ctttacgtag tcgatggtca
     4021 gcgcgagcgc ccgctccatc atggctacgg catggatggc tacgatcagg cgctcctgcg
     4081 gcaattcctt catcagttgg tagaagccct gcccttcttc ggtcccgagc aggctggacg
     4141 ccggcagctg cacgtcctcg aagaacagct ccgaggtatc ggctgcgtcc atgccgagct
     4201 tcttcagctt gcggccacgc cgaaatccct gcgcctcatc ggtttcgacc acgaacaatg
     4261 acgtgccctt tgcccccgct ttcgggtccg tcttggccac gacgacaacc agattggcgt
     4321 gctgtccgtt cgttatgaac gtcttcgatc cgttgagcgc ataaccattc ccggatttct
     4381 tcgccgaggt gcggatgcct tgcaggtccg agccggtgcc gggctctgtc atggcgatcg
     4441 cgccgaccag ttcgccggtg gcgagtttcg gcagccatcg ctttttctgt tcttcggtgc
     4501 cgtagtgcag aatgtagggc gcaacgatcc ctgaatgcag gggcgcgccg aatgtatcga
     4561 atccggccag cgcgaattca cgattaatga ctgcttcg
//
LOCUS       DATDHO010000137         2750 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_105632, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000137 DATDHO010000000
VERSION     DATDHO010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_105632"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            85..1059
                     /locus_tag="VIY07_02540"
     CDS             85..1059
                     /locus_tag="VIY07_02540"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019443350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004364 - glutathione transferase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY6380663.1"
                     /translation="MGLLVDGVWQDDVSRTKDGHFIRPTTQFRSWVTPDGSAGPTGEG
                     GFPAEAARYHLYVSLACPWAHRTVIFRKLKALENMISMSVVSPDMGREGWTFNKSEGS
                     TGDEVNGKSKLSETYLLANPRYSGRVSVPVLWDKKRKTIVNNESPEIIRMLNSAFDAF
                     TNVRTDYYPKDLRGEIDRLNDLVYPNINNGVYRAGFATTQAAYEQAFRNIFDTLEEIE
                     QILSQHRYLVGNTITEADWRLFSTLIRFDAVYYSHFKCNWRHISEYPNLSNYVRDLYQ
                     VPGVAETVSIEQIKRHYYGSQRHVNPTGIVPVGPQLDFAAPHDRVRFG"
     gene            complement(1063..1545)
                     /locus_tag="VIY07_02545"
     CDS             complement(1063..1545)
                     /locus_tag="VIY07_02545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEY6380664.1"
                     /translation="MALQRLRRRFEPAISRGLHFYWRFSRAATLGTRAMVVDGTGRIF
                     LVKHSYVDGWHLPGGGVETGETLLEALARELAEEGNIRLGAAPALFGIYFNKRISRRD
                     HVALFIVRDFRQEGSPRPNHEIVEHGFFPVDALPEDTTRATRARVAEVFGGAAISELW
                     "
     gene            1677..2636
                     /locus_tag="VIY07_02550"
     CDS             1677..2636
                     /locus_tag="VIY07_02550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HEY6380665.1"
                     /translation="MKRFSDLSEQEVLALAITNEEEDSRIYRGFAEGLREQFPASAKV
                     FDEMAEEEVHHRTMLFDLYRKKFGDYLPLIRRQDVKGFLHPKQPLWLTRPLGLEEVRK
                     FAENMEYEAERYYRKAAANARDASVRQLLVELAEAEAGHESLAHKLSQEILTKGTRAK
                     EDETARRMFVLQYVQPGLAGLMDGSVSTLAPLFAAAFATHNTWETFLVGMAASVGAGI
                     SMGFAEALSDDGSLTGRGTPWLRGTVCGLMTTIGGVGHTLPYLIPDFYVATAIAILVV
                     VLELAAISWIRTRFMDTPFLQAAFQVVVGGTLVFVAGILIGSS"
BASE COUNT          560 a          811 c          800 g          579 t
ORIGIN      
        1 atgatgatca tggcaaagtg cgattgatat tgttaattcg acccttaact cgggtgctgg
       61 acttgcaaaa acggagcaaa aggtatggga cttctggtcg acggcgtctg gcaggacgac
      121 gtttcgcgca cgaaagacgg ccattttatc cggccgacca cgcaattccg cagctgggtt
      181 acgccggacg gaagtgccgg ccctaccggc gaaggcggtt ttcctgccga agccgcccgc
      241 tatcacctct atgtttcgct cgcctgcccg tgggctcatc ggaccgttat tttccgcaag
      301 ctcaaggcgc tggagaacat gatctcgatg tcggtcgtgt cgcccgatat ggggcgcgag
      361 ggctggacat tcaacaagtc ggaggggtcg accggcgatg aggtgaacgg gaaaagcaag
      421 ctgtcggaga cttatctgtt ggccaatcct cgctactcgg gccgcgtgag cgtgccggtg
      481 ctctgggaca agaagcgcaa gacgatcgta aacaacgaat cgcccgaaat catccgcatg
      541 ctcaactcgg cgttcgatgc gtttaccaac gtgcgtaccg attactatcc gaaagacctg
      601 cgcggcgaga tcgaccgcct caacgatctt gtctacccga acatcaacaa tggcgtctat
      661 cgcgcaggct ttgccacgac gcaggccgcc tacgagcagg catttcgcaa cattttcgac
      721 acgctggagg agattgagca gattctgtcg cagcaccgtt acctggttgg aaacacgatt
      781 acggaggccg actggcggct gttctccact ttgatccgct tcgacgccgt ttactactcg
      841 catttcaaat gcaactggcg acacatctcg gagtatccaa acctgtcgaa ctatgtgcgc
      901 gacctctatc aggtgccggg cgttgccgag acggtgagca tcgagcagat caagcgtcac
      961 tattacggaa gccaacggca tgtgaatccg accggcatcg ttccggtcgg tccgcagctc
     1021 gacttcgctg cgccgcatga tcgcgtgcgc ttcggctagg cctcaccaca attcgctgat
     1081 tgccgcaccg ccaaatactt ctgccacgcg ggcgcgcgtg gctcgggttg tgtcttccgg
     1141 caatgcatcg accgggaaga acccgtgttc gacaatttca tggttggggc gcgggcttcc
     1201 ctcctgtctg aaatcgcgaa caatgaaaag cgccacgtga tcgcgccgcg atatccgttt
     1261 gttgaagtag atcccgaaga gcgcaggcgc agcgccaagc ctgatgttgc cttcctcggc
     1321 aagctcacgc gcgagtgcct cgagaagagt ttcccccgtc tcgacgcccc cgccgggaag
     1381 atgccatccg tcgacatagg aatgcttaac cagaaaaatt cggcccgtcc cgtcgacgac
     1441 catggcgcgt gtgccgagcg tcgcggcacg cgagaaccgc caatagaaat gcagcccgcg
     1501 gctgattgcg ggctcgaatc ggcggcgaag gcgctgcagt gccatcggac aggtttctcg
     1561 tgttccggcg tccgcgattt atcgacagcc ttgcggacaa gtgcaaacgg ctgtttccac
     1621 tttagaatac ttctaatata agaaagtcct caccgcctaa ggcgaaaggt atttcagtga
     1681 aacgtttttc cgacctcagt gaacaggaag ttctggccct tgccataaca aatgaggagg
     1741 aggacagccg catttaccgg ggctttgcgg aaggcctgcg tgagcagttt cccgcctccg
     1801 caaaggtctt cgatgagatg gcggaggagg aagtgcacca ccgcacaatg ctgttcgatc
     1861 tctatcgcaa gaagtttggc gattatctgc cgcttatccg ccgccaagac gtgaaaggct
     1921 tcctgcatcc caagcagcct ctttggctga caaggcctct cggactcgaa gaggtgcgca
     1981 agttcgccga gaacatggaa tatgaggcgg agcggtatta ccgcaaggca gcggccaacg
     2041 cgcgcgacgc ctcggtgcgc cagttgctgg tggagctggc tgaggccgaa gcggggcacg
     2101 agagtctcgc gcacaaactg agccaggaaa tccttaccaa gggcacgcgg gccaaggagg
     2161 acgaaaccgc gcgacgcatg ttcgtcctgc aatatgtcca acctggcctg gccgggctca
     2221 tggacggatc ggtttcgaca ctcgcaccgc tctttgccgc ggccttcgcc acgcacaata
     2281 cctgggagac ttttctggtc gggatggcgg cctctgttgg cgccggcatc tccatgggtt
     2341 tcgccgaggc gctctcggat gacggttccc tcaccggccg cggcacgccc tggttgcgcg
     2401 gcacagtgtg cgggctgatg acgaccatcg ggggagttgg ccatacgttg ccttacctga
     2461 ttcccgactt ctatgtcgcg actgcgatcg cgattctggt cgtcgtgctc gagttggctg
     2521 cgatctcgtg gatccgcacg cggttcatgg acacgccttt ccttcaggcg gcattccagg
     2581 tcgtagtcgg cggcacgctt gtttttgttg ccggcatttt gattggcagt tcatagtgca
     2641 actttctgag atgtttctat aactgtcatg cccggcacaa ggccgggcat gacagacaaa
     2701 atgttcaccc tcgcgcatct ttccgatccc catctcgccc ccctcccaat
//
LOCUS       DATDHO010000138        18684 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_6531, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000138 DATDHO010000000
VERSION     DATDHO010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 18684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18684
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6531"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..208
                     /gene="rplB"
                     /locus_tag="VIY07_02555"
     CDS             <1..208
                     /gene="rplB"
                     /locus_tag="VIY07_02555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589619.1"
                     /note="one of the primary rRNA-binding proteins; required
                     for association of the 30S and 50S subunits to form the
                     70S ribosome, for tRNA binding and peptide bond formation;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEY6380666.1"
                     /translation="RQRWKGRMPHNRGITMNPVDHPHGGRTKGGKHWTTPWGFPTKGK
                     KTRKNKRTKRFIVASRHDRKKKQQ"
     gene            220..492
                     /gene="rpsS"
                     /locus_tag="VIY07_02560"
                     /pseudo
     CDS             220..492
                     /gene="rpsS"
                     /locus_tag="VIY07_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562838.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
     gene            577..963
                     /gene="rplV"
                     /locus_tag="VIY07_02565"
     CDS             577..963
                     /gene="rplV"
                     /locus_tag="VIY07_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEY6380667.1"
                     /translation="MGKRQRERDLGENEAKAVSRMLRISPQKLNLVAQLIRGKKVASA
                     LADLQFSHKRIAKDVRKCLESAIANAENNHDLDVDDLVVAEAHVGKALVIKRFTPRGR
                     GRVGRIFKPFSNLTIVVRQVEARAEA"
     gene            974..1675
                     /gene="rpsC"
                     /locus_tag="VIY07_02570"
     CDS             974..1675
                     /gene="rpsC"
                     /locus_tag="VIY07_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEY6380668.1"
                     /translation="MGQKVNPVGLRVGINRTWDSRWFAGKAEYGSLLHEDIKIRDELM
                     KQLKQAAVSHIVIERPHKKCRVTIHSARPGVVIGKKGADIEKLRKSVAKLTDSDVVIN
                     IVEIRKPELDAQLVAESIAQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGA
                     EIARMEWYREGRVPLHTLRADVDYGVATAFTTYGTCGVKVWIFKGEILEHDPMAQDKK
                     LAEGDSGRPRRETAA"
     gene            1698..2111
                     /gene="rplP"
                     /locus_tag="VIY07_02575"
     CDS             1698..2111
                     /gene="rplP"
                     /locus_tag="VIY07_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEY6380669.1"
                     /translation="MLQPIRTKFRKAHKGRIHGVATSGTSLAFGQYGLKALEPERVTA
                     RQIEAARRALTRFMKRSGRVWIRVFPDVPVSKKPIEVRMGKGKGTPEIWVVRVKPGRI
                     LFEVDGIPVDVAREALGLAAAKLPVKTRFIERIAE"
     gene            2116..2298
                     /gene="rpmC"
                     /locus_tag="VIY07_02580"
                     /pseudo
     CDS             2116..2298
                     /gene="rpmC"
                     /locus_tag="VIY07_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510062.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
     gene            2432..2683
                     /gene="rpsQ"
                     /locus_tag="VIY07_02585"
     CDS             2432..2683
                     /gene="rpsQ"
                     /locus_tag="VIY07_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEY6380670.1"
                     /translation="MPKRTLHGVVVSDKQDKTIVVRVERRFAHPTMKKTIRRSKKYHA
                     HDEANAYSVGDVVWIEERRPISKLKRWEVIRGEKKQKVQ"
     gene            2718..3086
                     /gene="rplN"
                     /locus_tag="VIY07_02590"
     CDS             2718..3086
                     /gene="rplN"
                     /locus_tag="VIY07_02590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011567679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEY6380671.1"
                     /translation="MIQMQTNLDVADNSGARRVMCIKVLGGSKRKYATIGDVIVVSVK
                     EAIPRGRVKKGDVMKAVVVRISKDIKRPDGSVIRFDRNAAVLITPQMEPVGTRIFGPV
                     PRELRAKNHMKIISLAPEVL"
     gene            3086..3412
                     /gene="rplX"
                     /locus_tag="VIY07_02595"
     CDS             3086..3412
                     /gene="rplX"
                     /locus_tag="VIY07_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEY6380672.1"
                     /translation="MAAKIRKGDKVVVLAGRDKGRTGEVIEVRPDQERALVRGIGMVK
                     RHQRQTAQQEGGIISKESAIHLSNLAVADPKDGKPTRVSFKFVGEGDARKKVRVAKRS
                     GVEIDG"
     gene            3405..4085
                     /gene="rplE"
                     /locus_tag="VIY07_02600"
     CDS             3405..4085
                     /gene="rplE"
                     /locus_tag="VIY07_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEY6380673.1"
                     /translation="MADTQQNEGKKAQKSQKPQGAPKSAKEGGAPKGDGPKVKKPRER
                     SDYVARLKTHFEQVVRDQLSKQFSYNNRMQVPKITKVVLNMGIGEGVADRKKVDNAAN
                     DLAMIAGQKAVITKSRKSIATYKLRDGQAIGCKVTLRKARMYDFIDRLVNIALPRVRD
                     FRGLNPKSFDGRGNYSLGLKEYTVFPEIDFDKVTDNWGLDITVCTSARNDEEARALLT
                     AFNFPFRQ"
     gene            4124..4429
                     /gene="rpsN"
                     /locus_tag="VIY07_02605"
     CDS             4124..4429
                     /gene="rpsN"
                     /locus_tag="VIY07_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEY6380674.1"
                     /translation="MAKKSSVEKNNRRRRMAKKFANRRAKLKAIAQDKKLPMEERFAA
                     TLKLAELPRNSSRTRVRNRCELSGRPRGYYRKHRLSRIALRELGSKGLIPGLVKSSW"
     gene            4440..4838
                     /gene="rpsH"
                     /locus_tag="VIY07_02610"
     CDS             4440..4838
                     /gene="rpsH"
                     /locus_tag="VIY07_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEY6380675.1"
                     /translation="MAVNDPIGDMITRIRNAQMRNKSKVSMPGSKQRERVLEVLKTEG
                     FIRGYASVAHASGRSELEIELKYFDGEPVIREIERISKPGRRVYVAVRNLPRINNGLG
                     VAILSTPKGVMADHDAREANVGGEIICTVF"
     gene            4838..5371
                     /gene="rplF"
                     /locus_tag="VIY07_02615"
     CDS             4838..5371
                     /gene="rplF"
                     /locus_tag="VIY07_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEY6380676.1"
                     /translation="MSRIGNKAVTVPTGVTANVEGQTVKVKGPKGALQVVVHDDVSVV
                     MDKGAIKLEPRGESKRARAMWGTSRTLVANVMSGVTKGFEEKLEITGVGFRAAVQGKT
                     LQLQLGFSHDVNFPIPEGIAFATPKPTEIVVSGVDKQKVGHVAAEIRGYRPPEPYKGK
                     GVRYANEYIFRKEGKKK"
     gene            5382..5744
                     /gene="rplR"
                     /locus_tag="VIY07_02620"
     CDS             5382..5744
                     /gene="rplR"
                     /locus_tag="VIY07_02620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEY6380677.1"
                     /translation="MSRLSDRTARRTATVRRKIRLAGRGRTRLSVFRSSKHIYAQLID
                     DVKGTTLVAASSLEKTMREGAKTGADIAAAKAVGKLIAERAKEKGIKDVVFDRGGYLY
                     HGRIKALADAAREGGLNF"
     gene            5759..6328
                     /gene="rpsE"
                     /locus_tag="VIY07_02625"
     CDS             5759..6328
                     /gene="rpsE"
                     /locus_tag="VIY07_02625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEY6380678.1"
                     /translation="MAREARRERERGEREERDSEFIDKLVHINRVAKVVKGGRRFGFA
                     ALVVVGDQKGRVGFGHGKAREVPEAIRKATDAAKRGLTRVPLREGRTLHHDVLGRHGA
                     GKVFLRAAPPGTGIIAGGPMRAVFETLGMQDVVAKSLGSSNPYNVVRATFDALKHQDS
                     PRSVAARRNIKVSTLQSRRRDTDAEATAD"
     gene            6340..6537
                     /gene="rpmD"
                     /locus_tag="VIY07_02630"
     CDS             6340..6537
                     /gene="rpmD"
                     /locus_tag="VIY07_02630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEY6380679.1"
                     /translation="MASAQSTIKVEQVGSPQRRYRIQRATLIGLGLNKIGRVRDLPDT
                     PAIRGMIRKVQHLVKVVGETK"
     gene            6632..7225
                     /gene="rplO"
                     /locus_tag="VIY07_02635"
     CDS             6632..7225
                     /gene="rplO"
                     /locus_tag="VIY07_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEY6380680.1"
                     /translation="MKLNQIADKPGARKKRMRIGRGIGSGMGKTGGRGGKGQTARAGV
                     SIKGFEGGQMPLHRRVAKRGFRNTAFAVNLNEINLGKVQTAIDAGLIDAKAPVDAAAM
                     VKAGLMRREKGGVKLLGDGELKSKVEFSVWRASKSAVAAVEKAGGTIKILAPAKEEDA
                     VPKGKNKRKALEAAKGGGKPKAGKPKAEAEGEQKSAE"
     gene            7365..8696
                     /gene="secY"
                     /locus_tag="VIY07_02640"
     CDS             7365..8696
                     /gene="secY"
                     /locus_tag="VIY07_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEY6380681.1"
                     /translation="MVSAAEQLAANLNFSALAKAEELKKRIWFTVGALLVYRLGTYIP
                     LPGIDPSAWAQIFNTQSGGILGMFNMFSGGGINRMAIFALNIMPYISASIIIQLMTTV
                     SPTLEALKKEGEQGRKIMNQYTRYLTVVLATFQAYGIGIGLQGTGSVVSNPGIFFLIS
                     TTITLTGGTMFLMWLGEQITARGIGNGISLIIMSGIVAELPSAIAGTLELGRQGALST
                     GLILAVIVMAVAVIAFIVFMERAQRRLLIQYPKRQVGNRMFEGQSSHLPLKLNTSGVI
                     PPIFASSLLLLPTTVANFNAGQGPNWLTTMTTLLGHGRPLFLVLYIALIVFFAFFYTA
                     VVFNPTETADNLKKHGGFIPGIRPGERTAEYIDYVLTRITAVGALYLAIVCLVPEILI
                     SYAAVPFYFGGTSLLIVVSVTMDTVAQVQGYLLAHQYEGLIKRSKLRGRTR"
     gene            8693..9475
                     /locus_tag="VIY07_02645"
     CDS             8693..9475
                     /locus_tag="VIY07_02645"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEY6380682.1"
                     /translation="MRLILLGPPGAGKGTQAQRLINNHGIVQLSTGDMLRAAVAAGTP
                     VGLQAKSIMERGELVPDEIVVAIIADRIGQPDAKRGFVLDGFPRTVSQAEALDRLLAE
                     RGLKLDGVIELKVNEGILLARIEKRVAEMMARGENVRADDTPEVLRGRLSAYRAQTAP
                     LVGYYAGKGMLKSVDGMAMIDEVAAAIDRHLGSGALLRRRRPKAARPAKSSARRKAKP
                     RKAAKRAVSSARPQRKRSVTKRRKNASGRPKNRARRRLTRTR"
     gene            9628..10011
                     /gene="rpsM"
                     /locus_tag="VIY07_02650"
     CDS             9628..10011
                     /gene="rpsM"
                     /locus_tag="VIY07_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEY6380683.1"
                     /translation="MARIAGVNLPTNKRVVIALQYIHGIGPKIAQDIVGKVNLPAERR
                     VSQLTDAEVLQIREIIDRDYMVEGDLRREVQLNIKRLMDLGCYRGLRHRKGLPVRGQR
                     THTNARTRKGPAKTIAGKKRAPGPT"
     gene            10065..10454
                     /gene="rpsK"
                     /locus_tag="VIY07_02655"
     CDS             10065..10454
                     /gene="rpsK"
                     /locus_tag="VIY07_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEY6380684.1"
                     /translation="MGKEATRVRRRERKNIASGVAHVAASFNNTMITITDAQGNTIAW
                     SSAGTMGFKGSRKSTPYAAQVAAEDAAKKAQEHGMRTLEVEVSGPGSGRESALRSLQA
                     AGFTITSIRDVTTIPHNGCRPRKRRRV"
     gene            10571..11587
                     /locus_tag="VIY07_02660"
     CDS             10571..11587
                     /locus_tag="VIY07_02660"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEY6380685.1"
                     /translation="MIQKNWQELIRPNKLQVAVGSDASRVATVVAEPLERGFGVTLGN
                     ALRRILLSSLQGAAVQSVHIDGVLHEFSSIAGVREDVTDMVLNIKDIAIKMQGEGPKR
                     MVVKKQGPGTVTAGDIQTVGDVVVLNPDLVLCTLDEGAEIRMEFTVNTGKGYVPAERN
                     RPEDAPIGLIPVDSLYSPVRKVSYKVENTREGQILDYDKLTLTIETNGAVSPEDSLAY
                     AARILQDQLNVFVNFEEPRKEAAAEAIPDLAFNPAFLKKVDELELSVRSANCLKNDNI
                     VYIGDLVQKSEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIEELAKRF
                     EDHY"
     gene            11658..12089
                     /gene="rplQ"
                     /locus_tag="VIY07_02665"
     CDS             11658..12089
                     /gene="rplQ"
                     /locus_tag="VIY07_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEY6380686.1"
                     /translation="MRHGKVHRKLNRTAEHRKAMFANMAASLIKHEQIVTTLPKAKEL
                     RPIVEKLVTLAKKGGLSARRQAVAEIRDVVQVKKLFDVIGPRYKDRDGGYTRIMKAGF
                     RYGDNAAKAVIEFIDRDVEAKGKDSGPVEEKKVEQEATAAA"
     gene            12198..13052
                     /locus_tag="VIY07_02670"
     CDS             12198..13052
                     /locus_tag="VIY07_02670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY6380687.1"
                     /translation="MTIRTAMLAAAIGTAAVGVANAQSTQSDLLKRGDYLVNGVLTCG
                     NCHSPKGPPEAVAGKDYSGGLSWDEPPFKVTAPNITPDKETGIGAWTDAELKTVMRTG
                     IRPNGVHVAMIMPTGFYHIMTERDLNAVVAYLRTLKPVSNKVEDPIYKVPQVEIVPPG
                     GEKVFTEDMMKDKVKKGFYLVTIAHCMECHTPMEKGARQWDRLGAGGFEFPGPWGVSV
                     ARNITSSKTKGIGNWSDEEIKRAITAGIGKDGSTLKPPMGYQYYATMTADDVDAVVAY
                     LRTVPPVD"
     gene            13231..14622
                     /locus_tag="VIY07_02675"
     CDS             13231..14622
                     /locus_tag="VIY07_02675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEY6380688.1"
                     /translation="MLLKQVAVVLTVAVAFAGSTAAQERRIPTQSELRLSYAPVVQRV
                     APAVVNVYAAKLVQNRNPLLDDPIFRRFFGAPGGGGNQLQRSLGSGVIIDPAGLVVTN
                     NHVIEGADEVKVSLADKREFEATLVLKDARTDLAVLRIKDGREQFPVLEFADSDALQV
                     GDVVLAIGNPFGVGQTVTHGIVSALARTQVGISDYRFFIQTDAAINPGNSGGALVDLT
                     GKLIGINTAIFSRSGGSQGVGFAIPANMVLVVVTSAKTGGSAVVRPWLGAKLQPVTAD
                     IADSMGLKRPAGALVANVNANSPAARAGIKAGDLIVSVDGQDVDDPNAFDYRFATKPL
                     GGSARLGLLRAGREVMATVGLQSAPATPRDEIVIRSRSPFSGVKIANLSPALADELQL
                     QNVDKGVAVVDVDAGSYASNLGFQRGDVIQEVNGEPISKTRDLERLTSTPSRSWRIII
                     LRGGQKISAVFSG"
     gene            14744..16078
                     /locus_tag="VIY07_02680"
     CDS             14744..16078
                     /locus_tag="VIY07_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEY6380689.1"
                     /translation="MAPRAQTGGPSLFAAAGLDKDAPRPLADKLRPQKLDEVVGQDHL
                     LGPDGALTRMLATRSLGSLVFWGPPGTGKTTVARLLAQATDLHFEQISAIFTGVADLK
                     KVFEDARSRRELGQGTLLFVDEIHRFNRAQQDSFLPVMEDGTIILVGATTENPSFELN
                     APLLSRARVLVFRSLDAAAIEKLLERAEKIEGRRLPLDDEARDALKRMADGDGRAALT
                     LAEEVWRSARKDEMFNAAKLQDIVQRRAPIYDKSQDGHYNLISALHKSVRGSDPDAAL
                     YYLCRMLDAGEPPLYIARRVVRMAIEDIGLADPQALVIANAAKDAYDFLGSPEGELAI
                     AQAVIYCATAPKSNAAYTAFGAAMRTAKEAGSLLPPKHILNAPTRLMQDEGYGRGYAY
                     DHDAEEAFSGQNYFPESLERQKFYDPPERGFERDIRKRLEYWAKLRKERGEG"
     gene            16075..17277
                     /locus_tag="VIY07_02685"
     CDS             16075..17277
                     /locus_tag="VIY07_02685"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEY6380690.1"
                     /translation="MSRGRSGPRQPGGGRQMAGPRHQRLQTRHHPVRPSEVRAQRASK
                     GDSRGRPSFEGGRPLSRQEDGERSLEATGKVQTVTVTPDESGMRVDRFFEARFPGLSF
                     SHIQRIIRKGEVRVNGKRTQPKARLEAGYAVRIPPLKTAPPAPRDDAPQAQKDRAFLK
                     SITLYEDADVLVLNKPMGLAVQGGSGTMRHIDGMLGALRGPDGQRPRLVHRLDKDTAG
                     CLLVAKTRFAASELAKTFRSRSARKIYWALVAGVPRPRQGRISTFLAKEERDEDSIMR
                     VAAHGEKGASHAVTYYAVVETAAQRLAWLSLKPVTGRTHQLRAHMAHIEHPIVGDPKY
                     FTKENCELPGGIQNKLHLLARRIAVPHPRGGVIDVSAPLPPHMEQSWNLLGFDAKRFD
                     PIEQAPEE"
     gene            17310..17738
                     /locus_tag="VIY07_02690"
     CDS             17310..17738
                     /locus_tag="VIY07_02690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380691.1"
                     /translation="MTRTYALTLLVLIGLTAMFAVPARAQSDIMSDNYSIMVPERGYK
                     PSRPEPWLAPKYKSPRGTVKHVTIPKPTNVPMPNTQVPPDLYVPQTGRTTPNLPTLSG
                     SGRGGVETFQDRAMRCSHQAGVFGQGAGDRGSYMGACLNQ"
     gene            complement(17821..>18684)
                     /locus_tag="VIY07_02695"
     CDS             complement(17821..>18684)
                     /locus_tag="VIY07_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014892890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015499 - formate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015724 - formate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HEY6380692.1"
                     /translation="AKSSNTVRKLQSGSRSRGGHSRGITEDEVKDVEELATPRTPVIY
                     EVVRRLGEEEMERPSTSLWWSGVAAGLSISFSLLTQAILQTHLPEADWQPLVVSFGYC
                     VGFIMAVLSRQQLFTEITITAVLPVMASLTWTNVGRMARMWAIVLAANLAGTLFAALF
                     CTFTPVLPQQIYDGMLTVSRELVALGWWETIFRSIAAGFLMAAMVWLMPGAERAQFHV
                     ITLMTWLIAVGGFTHIVAGSMEAYLLVLAGDWAWWQMIPQFMLPVLIGNVVGGTALFA
                     LLSYAQVMEEI"
BASE COUNT         4018 a         5439 c         5905 g         3322 t
ORIGIN      
        1 ccggcaacgc tggaagggcc gtatgccgca taaccgcggc atcacgatga atccggtcga
       61 ccacccgcat ggcggccgca ccaagggcgg caagcattgg accacaccat ggggcttccc
      121 gaccaagggc aagaagaccc ggaagaataa acgcacaaag cgattcattg tcgcgagccg
      181 gcatgatcgc aagaaaaagc agcaataagg acacgaggta tgacccgctc agtttggaaa
      241 ggtccttttg tcgacggtta tttgctgcgc aaggcagagg ccgcgcgcgc gtcgggccgt
      301 cacgagttga tcaagatatg gagccggcgc tcgaccatct taccgcaatt cgtcggactc
      361 aatttcgctg tctataacgg ccagaagcac attcccgtaa tggtgaacga agagatggtc
      421 ggtcacaagt tcggcgagtt cgcgccgacg cggatgttct acggccattc gtccgatcgc
      481 aaggccaagc gggtgggcgc gcctgccgca ccgggtgcgc cggctccggc agcccctgcg
      541 ccttcgagcg agagctaagg gacaaagagt acgatcatgg gcaagcgcca acgcgagaga
      601 gacctcgggg agaacgaggc caaggctgtg agcaggatgc tgcggatttc cccgcagaag
      661 ctcaacctcg tggcccaact cattcgcggc aaaaaggtcg cgagtgcgct cgccgatctg
      721 cagttttcgc acaagcgcat cgctaaggat gtccgcaagt gcctggaatc ggcgatcgca
      781 aacgccgaga acaatcacga cctcgacgtc gacgatctcg tcgtcgccga ggcccatgtc
      841 ggaaaggcgc tggtgatcaa gcgcttcacc ccgcgcggcc gcggccgtgt tggacgaatt
      901 ttcaagccgt tctccaacct gaccatcgtt gtgcgtcagg ttgaggcgcg ggcggaagcc
      961 tgaggagtac gcgatgggtc agaaagtcaa tccggtcggg ctgcgcgtcg gtatcaaccg
     1021 cacctgggat tcgcgctggt tcgccggcaa ggcagaatac ggctcgctgc tccacgagga
     1081 catcaagatc cgcgacgagt tgatgaagca gctcaagcag gcagcggtgt cgcatatcgt
     1141 catcgagcgg ccgcacaaga agtgccgcgt gaccatccac tcggcccgtc ctggcgtcgt
     1201 gatcggcaag aagggtgccg acatcgagaa attgcgcaag tcagtcgcca agctcacgga
     1261 cagcgacgtc gtcatcaata tcgttgagat ccgcaagccc gagctcgacg cgcagctggt
     1321 tgcggaatcg attgcgcagc agctcgagcg tcgtgttgcg ttccgccgcg ccatgaagcg
     1381 cgcggttcaa tcggcaatgc gcctcggcgc cgaaggcatc cgtatcaatt gctcggggcg
     1441 cctcggtggg gcggaaatcg cgcgcatgga gtggtatcgc gaaggacgcg tgccgctgca
     1501 cacgctgcgt gccgacgtcg actatggggt agcgaccgca ttcaccacgt acggcacctg
     1561 cggagtgaag gtctggatct tcaagggaga aatccttgag cacgatccga tggcgcagga
     1621 caagaaattg gccgaaggcg acagtggtcg cccccgccgc gagaccgcgg cctgaggaga
     1681 tgaacagagt ttaagtcatg ctgcagccga tccgtaccaa gttccgcaag gcgcataagg
     1741 gccgcatcca cggcgtggcc acgagcggca cgtcccttgc cttcgggcaa tatggcctca
     1801 aggcgctgga gcccgagcga gtcaccgcgc gccagatcga ggctgcgcgc cgtgcactca
     1861 cgcgcttcat gaaacgttcc ggccgcgtgt ggatccgagt gttccccgac gttcccgtgt
     1921 cgaagaagcc gatcgaggtg cgcatgggca aaggcaaggg gacgcccgaa atttgggtcg
     1981 tgcgggtaaa gcctggccgc atcctgttcg aggtcgacgg catcccggtc gacgttgcca
     2041 gggaagccct gggcctcgcc gccgccaaac tgccggtcaa aacccgtttt attgaacgca
     2101 tcgccgagtg acgccatgaa agccgccgac gcaagagcga tgacgctcga tcagctcgat
     2161 gacgaagtgc ttaagctgaa gaaggagcag ttcaatctgc gcttccagcg cgcgaccggg
     2221 cagctcgaaa atacttctcg cgtgcggacg atccggcgcg acatcgcgcg catgaagaca
     2281 atcgcggcgc aaaagcgcgc cgggatgcca gagccggcgc cgaaagcaga cgccgagcct
     2341 gtcgctaaaa agccaaaagc aagcaagcct aagactgctg cgaaaaccaa gtcgcgcacc
     2401 aagacgaaat cgaaggaata agaggttcta gatgccgaag cgtacgctcc atggcgtcgt
     2461 cgtgagcgac aagcaggaca agacaatcgt cgtgcgcgtt gagcgtcgtt ttgcgcaccc
     2521 gacgatgaaa aaaaccattc gccgctccaa gaagtaccac gcgcatgacg aggcaaacgc
     2581 ctactcggta ggcgatgtgg tgtggatcga agagcgtcga ccgatctcga agcttaagcg
     2641 ctgggaagta attcgcggcg agaagaagca gaaagttcaa taggctttat gagccagcag
     2701 atagtgagag ccgcatcatg attcagatgc aaaccaacct tgacgtagcg gacaactccg
     2761 gcgcgcgtcg cgtcatgtgc atcaaggtgc tcggcggctc caagcgcaaa tatgccacga
     2821 tcggcgacgt cattgtcgtt tcggttaagg aggcgattcc gcgcggccgt gtcaaaaaag
     2881 gcgacgttat gaaggccgtc gtcgtgcgca tttccaagga tatcaagcgc cccgatggct
     2941 cggtcatccg tttcgatcgc aatgcagccg tgctgattac gcctcagatg gagccggtag
     3001 gcacgcgcat cttcgggccg gtgccacgcg agttgcgcgc caaaaatcac atgaagatca
     3061 tttcgctcgc cccggaggtg ctgtgatggc agcaaagatc cgcaagggcg acaaggtggt
     3121 ggttcttgcc ggccgcgaca aaggtcgcac cggcgaggtg atcgaggtgc gtcccgatca
     3181 ggagcgggcg ctggtgcgcg ggatcggaat ggtgaagcgc catcagcggc agaccgcgca
     3241 gcaggaaggc gggatcatct ccaaggagag tgcgatccat ctgtcgaatc ttgctgttgc
     3301 cgaccccaag gacggaaaac cgactcgcgt cagcttcaag ttcgtcggcg aaggcgacgc
     3361 gcgcaagaag gtgcgcgtcg ccaagcgttc tggagttgaa atcgatggct gatacgcagc
     3421 aaaacgaagg caagaaggcg cagaagtcgc aaaagcccca gggtgccccg aaaagtgcga
     3481 aagagggcgg cgcgcccaag ggagatgggc cgaaggtgaa gaaaccgcgc gagcgctcgg
     3541 actacgtcgc gcgcttgaag acgcacttcg agcaggtggt gcgggaccag ctgtcaaagc
     3601 agttcagcta taacaaccgc atgcaggtgc ccaagatcac caaagtcgtg ctcaacatgg
     3661 gtatcggcga gggcgttgcc gaccgaaaga aggtggacaa cgcggccaac gacctggcga
     3721 tgattgcggg gcagaaagcg gtcatcacca agtcgcgcaa gtcgatcgca acatacaagc
     3781 tgcgcgacgg tcaggcgatc ggctgcaagg tcacgctgcg caaggcgcgg atgtatgact
     3841 tcatcgaccg cctcgtgaat atcgcgttgc cccgcgtgcg cgattttcgt gggctgaatc
     3901 cgaagagctt tgatggccgc ggcaattaca gcctcggcct caaggaatac accgtgttcc
     3961 cggagatcga tttcgacaag gtcaccgata actggggcct cgatatcact gtttgtacca
     4021 gcgcgcgcaa tgacgaagaa gcgcgcgcac tgctcacagc gtttaacttt ccgttccggc
     4081 agtgaggtca agcctcatac gcggaaccgc aaggagcgaa agtatggcga agaagagttc
     4141 ggtcgagaag aacaatagac ggcgcaggat ggcaaagaaa tttgccaacc ggcgcgcgaa
     4201 gctgaaggct atcgcgcagg acaaaaagct gccgatggag gagcgttttg ccgcgactct
     4261 gaagctggct gaattgccgc gcaattcctc cagaacgcgc gtgcgcaatc gctgcgagct
     4321 aagcggccgc ccgaggggct attaccgcaa gcaccgcctg agccgtatcg cattgcgcga
     4381 gcttggctcc aaaggcctta ttcccggcct tgtgaagtcg agctggtgag gagggcgcaa
     4441 tggcagtgaa cgatccgatc ggtgacatga tcacgcgaat ccgaaatgca caaatgcgca
     4501 acaaatcgaa ggtttcgatg cccgggtcca agcagcgcga acgcgtgctt gaggtgctca
     4561 agaccgaggg ttttatccga ggttacgcca gcgttgctca cgcgagcggc cggtccgagc
     4621 tcgagatcga gttgaaatat ttcgatggcg agccggtgat ccgtgaaatc gaacgcattt
     4681 cgaagcccgg ccgtcgtgtt tacgtggcgg ttcgcaacct gccgcgcatc aacaatggcc
     4741 tgggcgttgc tattctgtcc acgccgaagg gcgtcatggc cgatcatgat gcgcgtgagg
     4801 cgaatgtggg cggcgaaata atctgcacgg tgttctgatg tcacgcatcg gcaataaagc
     4861 ggttacggtt ccgactggcg tcaccgccaa tgttgaaggc cagaccgtca aggttaaggg
     4921 tccgaaaggg gcccttcagg tcgtggtcca cgacgatgta tccgtcgtca tggacaaggg
     4981 cgcgatcaag ctcgagcctc gcggcgagag caagcgggcc cgcgcgatgt ggggtacctc
     5041 gcgcacgctg gtcgccaacg tgatgtccgg cgtcaccaaa ggctttgaag agaagcttga
     5101 gatcacaggc gtgggctttc gcgccgcggt gcagggcaag acacttcagt tgcagctcgg
     5161 cttttcccac gacgtgaact ttccgatccc cgaaggcatc gcgtttgcca cgccgaagcc
     5221 gacggagatc gtggtgagtg gggtcgacaa gcagaaagtt ggtcacgtcg cggccgaaat
     5281 ccgcggctac cggccgcccg agccatacaa gggcaagggt gtcagatacg caaacgagta
     5341 catcttccgc aaggaaggga agaagaagta agggacgcgc catgtcgaga ttaagcgacc
     5401 ggaccgcccg gcggacggcg acagtgcgac gcaagatcag gctcgcgggg cgcggtcgta
     5461 cgcggttgtc tgtcttccgc tcgtcgaagc acatctatgc ccagctcatc gatgacgtga
     5521 agggcacgac attggttgca gcgtcctcgc tggagaagac gatgcgcgag ggcgccaaga
     5581 cgggtgccga tatcgcggcg gccaaggcgg tcggcaagct gatcgccgag cgcgccaagg
     5641 aaaagggcat caaggacgtc gtgttcgatc gcggcggcta tctgtatcac ggacgcatca
     5701 aggcgctggc cgatgccgcg cgcgaaggcg gactcaactt ttaacggaac gaacgcatat
     5761 ggcacgggaa gcccgacggg aacgagagcg cggtgagcgg gaagagcgcg acagcgagtt
     5821 catcgacaag ctggtgcaca tcaaccgcgt ggcaaaggtg gtcaagggcg gccgccggtt
     5881 tggatttgcg gcgctggtcg tcgtaggcga ccagaagggc cgggtcggct tcggtcacgg
     5941 caaggcacgc gaagtgccgg aggcaatccg caaggcgacc gacgctgcga agcgggggct
     6001 tacccgcgtt ccgctccggg aagggcgcac gttgcatcat gatgtgctgg gtcgccacgg
     6061 ggccggtaaa gtattcctgc gcgcggcgcc tccaggcacc ggcatcatcg ccggaggtcc
     6121 aatgcgggcc gtgttcgaaa cgcttggcat gcaggacgtc gtggcaaaat cgcttggctc
     6181 atccaatccc tacaacgttg tgcgtgcgac attcgacgcg ctcaagcacc aggattcgcc
     6241 gcgctcggta gcggctcgcc gcaatatcaa ggtgtcgacc ctgcagtcgc gccgccggga
     6301 taccgatgcc gaagcgacgg ctgactgagg aatctgacga tggcttccgc acaaagtact
     6361 atcaaggttg agcaggtggg cagcccacag cggcgatacc gcatccagcg cgccacgttg
     6421 atcgggctag gcctgaacaa gatcgggcgc gtgcgagacc ttccggatac gcctgcgatc
     6481 cgcggaatga tccgcaaagt tcagcatttg gtcaaagtgg tcggggaaac gaaatgacgt
     6541 ctcggccggg cttggccggc catcccagca aaaggcacat cagtacctgc ctgggataaa
     6601 gaccgacacg tgaagaagtg aggataagga catgaaactc aaccagattg ccgacaagcc
     6661 aggcgcgcgc aaaaagcgca tgcgcattgg ccgcggcatc ggttccggga tggggaagac
     6721 cggcggtcga ggcggcaagg gtcagactgc gcgcgccggc gtcagcatca agggattcga
     6781 aggcggccag atgccgctcc atcgccgcgt ggcaaagcgc ggtttccgaa acacggcatt
     6841 cgcggtcaat ctcaacgaga tcaatctcgg caaggttcaa acggcgatcg atgccgggtt
     6901 gatcgatgcc aaggctcccg tcgatgccgc ggcaatggtc aaggccgggc tgatgcggcg
     6961 cgagaaaggc ggcgtgaagc tccttggcga tggcgaactc aagagcaagg tcgaattttc
     7021 ggtctggcgc gcctcgaaat cagccgtcgc cgcggttgag aaggcaggcg gtacgatcaa
     7081 gattctagcg ccggccaagg aagaggacgc tgtgccgaaa ggcaagaaca agcgtaaggc
     7141 actggaggct gccaaaggcg gcggcaaacc gaaggccgga aagcctaagg cggaagcgga
     7201 aggcgaacag aaaagcgccg aatagtagct ccttggcgcc gcccccgatg ggtgcggcca
     7261 gcggctttcg ggctacagat ttggaccatc gcccctatct agagggctct aaggaacaag
     7321 tgcctcgtct tcgcggggca tgaaagcgga agggtcgagc ggccatggtc tctgcggcag
     7381 aacaactggc agccaatctc aatttctcgg cgctggccaa ggcggaagaa ctcaagaaaa
     7441 gaatctggtt caccgttgga gcgctgctgg tttatcgcct cggtacctac attccgttgc
     7501 ccggtatcga tcccagcgct tgggcccaga ttttcaacac ccagtcgggg ggcatcctgg
     7561 gcatgttcaa catgttttcg ggcggcggga tcaaccggat ggcgatcttc gcgctcaaca
     7621 tcatgccgta catttcggcc tccatcatca tccagttgat gacgacggtc tcgccaacgc
     7681 tcgaggcgtt gaaaaaggaa ggcgagcagg gccgcaagat catgaatcaa tatacgcggt
     7741 atctcaccgt ggtgctggct acattccagg cttacggcat tggcatcggc ctccagggga
     7801 ccggaagcgt ggtatccaat ccgggaattt tcttcttgat ctcgacgacg atcacgctca
     7861 ccgggggcac gatgttcctg atgtggctgg gcgagcagat caccgcccgc ggcatcggca
     7921 atggcatttc gctgatcatt atgtctggca tcgttgccga gctgccatcc gcgatcgccg
     7981 gcactcttga actcggtcgt cagggtgcgc tgtcaacggg gctaatcctc gccgtgatcg
     8041 tgatggcggt cgcggtcatc gccttcatcg tgttcatgga gcgagcgcaa cgccggctgc
     8101 tgatccagta cccgaagcgc caggtcggca atcgcatgtt tgaagggcaa tcctcgcatc
     8161 taccgctcaa actcaatacg tcaggcgtga tccctcctat tttcgcttcg tccctgcttt
     8221 tgctgccgac cacggtcgcc aacttcaatg ctggtcaggg acccaactgg ctcacgacga
     8281 tgacgacatt gcttggccat ggcaggccat tgtttctcgt tctttacatc gcgctgatcg
     8341 tgttcttcgc cttcttttat acggccgtgg tgttcaatcc gaccgagacc gcagacaatc
     8401 tgaagaagca tgggggcttc attcccggca tccggcccgg tgaacgaact gccgagtaca
     8461 tcgactacgt gctgacccgt atcaccgcag tcggcgccct ttatctcgcc atcgtgtgcc
     8521 ttgtaccgga aatactgatc tcgtatgcgg ccgtcccgtt ctatttcggc ggcacgtcgc
     8581 tgctgattgt cgtcagcgtc accatggata cggtggcgca ggttcagggc tacctgctgg
     8641 cacaccaata tgaagggctg atcaagcgct ccaagctgcg aggtcgcacg cgatgagatt
     8701 gatcctgctc ggcccgccgg gggcgggtaa gggcacgcaa gcgcagcgtc tgataaacaa
     8761 ccacggaata gtccagctct cgaccggaga catgctgcgc gctgcggtcg cggccggcac
     8821 tccggtgggc ctgcaagcca aaagcatcat ggagcgtggc gagctggtgc ctgacgagat
     8881 cgtggtggcg attatcgccg atcgcatcgg ccaaccggac gcgaaacgtg gctttgtgct
     8941 cgacggtttt ccgagaacgg tgtcgcaggc ggaagcgctc gatcgcctgt tggctgagcg
     9001 aggcctcaag ctcgacggcg tgatcgaatt gaaggtgaac gagggcattc ttctcgcccg
     9061 gattgagaaa cgggtggctg agatgatggc gcgcggcgag aacgtccgcg cggatgacac
     9121 accggaagta ttgagaggac ggctttccgc atatagggcg caaacggcac cgctcgtcgg
     9181 ctattacgcc ggcaagggca tgctcaagag cgtggacggc atggcaatga tcgacgaggt
     9241 tgcggcagcc atcgaccgcc atttgggatc gggcgctctc cttaggcgcc ggaggcccaa
     9301 ggcggctcgc ccggccaagt caagcgcgcg gaggaaggcc aagccgcgca aggcggccaa
     9361 gcgggcggtt tcaagtgccc gcccgcagcg aaagcgctcc gtcacgaaaa ggcgcaaaaa
     9421 tgcctcggga cggccgaaaa accgtgcccg gcggaggttg acgaggacgc gatgaatccc
     9481 ttaataagct gcacattcag aagtttgacg cgatgccggg cccccaaaca gtgggcacgg
     9541 gcgtcgtgtt acgctttgcg ctatcccatt cgcgggacaa gagaatttgg cgcgttccgc
     9601 gccttcggtg gatataggag aagctaagtg gctcgtatcg cgggcgtcaa tttgccgacc
     9661 aacaagcgcg tggtgatcgc gctgcagtac atccatggca tcgggcctaa gattgcccag
     9721 gacatcgtgg gcaaggttaa tttgccggcc gaacgccgtg tgtcgcagct caccgatgcc
     9781 gaggtgctcc agattcgcga gatcatcgac cgcgattaca tggtcgaggg cgatctgcgg
     9841 cgcgaagttc aactcaatat caagcggctg atggatctcg gttgctatcg cggactgcgt
     9901 caccgcaagg gactgccagt tcgcggccag cgcacccaca ccaacgcgcg gacccgcaag
     9961 ggaccggcca agaccatcgc cggcaagaag agggccccgg ggccgacttg ataacaggat
    10021 gagcccagcg ctgatcgcgg tgcacgggcg cgaaaggatt gagaatgggt aaggaagcca
    10081 cccgcgtccg tcgacgcgaa cgaaagaaca tcgcgtccgg cgtcgcgcat gtcgccgcat
    10141 cgttcaacaa tacgatgatc accatcaccg acgcgcaggg caacacgatt gcctggtcgt
    10201 cggccgggac aatgggtttc aagggctcgc gcaagtcgac gccgtacgct gcgcaagttg
    10261 ccgcggaaga cgccgccaag aaggcgcagg aacacggcat gcgcactcta gaagtcgagg
    10321 tatcgggtcc gggctcgggc cgggagtcgg ccctgcgttc gctgcaggca gccggtttca
    10381 cgatcacttc gatccgcgac gtgacaacga ttccgcataa cggctgccgg ccgcgaaagc
    10441 gtcgtcgcgt gtgattgttt ctttcgcgcg gaccatgcgg cccgcgcgcg tgttgccgcc
    10501 gagattttcc ccatgcggcg ggtggggtgc cccaggtgcg agaaggccgc gccgctgaaa
    10561 aggtgaagac gtgatccaga agaattggca ggaattgatc aggccgaaca agctccaggt
    10621 tgccgtgggc agcgatgcct cgcgggttgc gacggtggtc gccgagccgc ttgagcgcgg
    10681 ctttggcgtg acactgggca atgcgctgcg acggattttg ttgtcctcgc tgcagggagc
    10741 ggctgtgcag tcggtgcaca tcgatggcgt gctgcatgag ttttcctcga ttgccggcgt
    10801 gcgcgaggat gtcaccgaca tggtgcttaa catcaaggac atcgccatca agatgcaggg
    10861 cgaaggcccc aagcggatgg tggtgaagaa gcaggggccc ggcacagtca ccgccggcga
    10921 cattcagacc gttggtgacg tcgtcgtgct caacccggac cttgtgctct gcacgctcga
    10981 cgagggcgcc gagatccgca tggagttcac cgtcaatacc ggcaagggct acgtgccggc
    11041 cgaacgcaat cgtcccgagg acgcgccgat cggcctcatc ccggtcgaca gcctgtattc
    11101 gccggtacgc aaggtctcct acaaggtcga gaacacccgc gaaggtcaaa tcctcgacta
    11161 cgacaagctg accttaacca ttgaaaccaa tggcgcggtt tcgccggaag actcgctcgc
    11221 ctatgcggca cgaattctcc aggatcagct caacgtattc gtcaacttcg aggagcctcg
    11281 aaaggaggcc gccgccgagg ccattccgga ccttgcattc aatccggcct tcctcaagaa
    11341 ggtggatgaa ctcgaattgt ccgtgcgctc ggctaattgc ttgaagaacg acaacatcgt
    11401 ttacatcgga gacctcgtgc agaagagcga agcggaaatg ctgcgcacac cgaatttcgg
    11461 acgaaagtcg ctcaacgaga tcaaggaagt tcttgcgcag atgggcctgc atctcggcat
    11521 ggaagtgccg ggctggccgc cggaaaatat cgaagagctc gccaagcgct tcgaggatca
    11581 ttactaacca ggggacggta gtcagcaatc agtaatcaga ccttctgatc actgagcact
    11641 gattactgat tactgaaatg cgtcacggca aggttcaccg caagctcaac cgcacggcgg
    11701 agcatcgcaa ggccatgttc gccaacatgg ccgcatcgct gatcaagcac gagcagatcg
    11761 tcaccaccct gccgaaagcg aaggagctgc gtcccatcgt cgaaaagctt gtcacgctcg
    11821 cgaaaaaggg tgggttgtct gcccgtcgtc aggcggttgc ggaaatccgt gacgtggtgc
    11881 aggtcaaaaa gctctttgat gtgatcggtc cgcgttacaa ggaccgcgac ggcggctata
    11941 cccgcatcat gaaggccggg ttccgctacg gtgacaacgc ggcgaaagcc gtcatcgaat
    12001 tcatcgaccg cgatgtcgag gcgaaaggca aagactcagg ccccgtcgag gagaagaagg
    12061 tcgagcaaga ggcgaccgcg gcggcttgaa agtttccaga tgcgttttca agggcggcat
    12121 ttctgccgcc ctttttgttt gccgcagtcc acatcgcagt tatgatcaca cccaataagc
    12181 aatcgtgggg aatgttcatg acaattcgga cggcaatgtt ggcggcggcg attggaaccg
    12241 ccgcggtggg agtggccaat gcgcagtcga cgcaatccga tctccttaag cggggggatt
    12301 acctggtcaa tggcgtcctc acatgtggca attgccattc gcccaagggt ccaccggagg
    12361 ccgtcgccgg caaggactac tcgggaggcc tctcctggga cgagccaccg ttcaaggtga
    12421 cggcgccgaa cattactccg gacaaggaaa cgggcatcgg agcctggacc gacgcggaac
    12481 tcaaaaccgt catgcgaacc ggcatacggc cgaacggcgt tcatgtcgca atgatcatgc
    12541 ccacgggttt ctatcacatc atgacggagc gtgatctcaa cgccgtcgtt gcgtatttgc
    12601 gcacgctcaa gcccgtaagc aacaaggttg aagacccgat ctataaggtg ccgcaagtcg
    12661 agattgtgcc tccgggcggt gagaaggtgt tcaccgaaga catgatgaag gacaaggtca
    12721 agaaaggctt ttatctcgtc acaatcgcgc attgcatgga gtgtcatacc ccgatggaga
    12781 aaggcgctcg tcaatgggac cgcctcggcg ctggtggttt tgaattcccc ggcccttggg
    12841 gcgtctccgt cgcgcgcaac atcacatcga gcaagaccaa ggggatcggg aactggagcg
    12901 acgaggagat caagcgcgcc atcacggcgg gtatcggcaa ggacggcagc acgctcaagc
    12961 cgccgatggg ctatcaatac tacgcgacga tgacggcgga tgatgtcgac gctgtcgtag
    13021 cctacctgcg aactgtgccg ccagtcgact aggctgccgc agggacggga ggacagccac
    13081 ccttcaatta ggttcgatag aggcctatat ctctgcattc ccacgttcgt catgcccggc
    13141 ttttctgccg ggcgtccacg tcttgctttt caagtcgtgg atggccggaa gcagcttggt
    13201 catgacaaaa tgagggccgg gactcacatc atgcttctta agcaggttgc cgtcgtactg
    13261 accgtcgccg tagcgttcgc gggtagcacc gctgcccagg aacgacggat tccaacgcaa
    13321 tcggaactac gcctgtccta cgccccggtg gtgcagcgcg tggcgccggc ggttgtgaat
    13381 gtctatgccg ccaagcttgt gcagaaccgc aatccgctat tggacgatcc gatcttccgg
    13441 cgattcttcg gcgcccctgg aggcgggggc aatcagctcc agcgctcgct gggctccggg
    13501 gtgatcatcg accccgcggg attggtcgta acgaacaatc acgtcatcga aggcgcggac
    13561 gaggtgaaag tgtccctcgc cgataagcga gagttcgagg ccaccctcgt gctgaaggac
    13621 gcacgcactg atctcgcggt gttgcgcatc aaggatgggc gcgaacaatt tccggtcctg
    13681 gaattcgccg attcggatgc attgcaggtc ggcgacgtgg tactggcgat cggcaatcct
    13741 tttggcgtcg gacagacggt gacacacggt atcgtatcgg cgctggcccg cacgcaagtc
    13801 ggcatttcgg actatcgctt tttcatccag accgacgctg ccatcaatcc gggaaattcg
    13861 ggcggcgcgc ttgtggacct gaccggaaaa ctgatcggaa tcaacacggc gatcttctcg
    13921 cgatcgggtg gatcgcaggg agtgggtttc gcaattccgg ccaacatggt gctcgtcgtc
    13981 gttacatccg ccaagactgg cggcagcgcc gttgtgcggc cttggcttgg tgcgaaactt
    14041 cagccggtca cggccgacat cgccgacagc atgggcctca agcgtccggc cggcgcattg
    14101 gtcgccaacg tcaatgccaa cagccccgcc gcccgcgccg gcatcaaagc gggcgatctc
    14161 atcgtctcgg tcgatggcca ggacgtggac gatcccaatg cttttgacta ccgctttgcc
    14221 acgaaaccgc ttggaggcag tgcccgcctt gggctcttgc gggcgggacg cgaagtgatg
    14281 gcgacagtgg gcctgcagag cgctccggca acgcctcggg atgaaatcgt cattaggtca
    14341 cgctcgccat tctccggcgt gaagatcgcc aatctatccc ctgcgctggc cgacgaattg
    14401 cagctgcaga acgtggataa gggtgtagcc gttgtggacg tggacgccgg ctcgtatgca
    14461 agcaatctgg gcttccagcg cggtgacgtg attcaggaag tcaatggcga gcccatcagc
    14521 aagacgcgcg accttgaacg cctgaccagt acgcccagcc gcagctggcg catcatcatc
    14581 cttcgcggtg ggcagaaaat ttccgcggtg ttcagcggat gaataagtgt ccaacatttc
    14641 tttcggcatg cccgcggttg tcgcgggcat ccacgtcttt actcagtaag caaggcgtgg
    14701 atggcagaga caagcccggc gatgacgtcg aggatcgtcc atgatggctc cacgcgccca
    14761 aacgggcggc cccagcctgt tcgcggcagc aggcctcgac aaggatgcgc cacgtccgct
    14821 tgcggacaag cttaggccgc aaaaactcga cgaggttgtt gggcaggacc atttgctagg
    14881 gccggatggc gcgctcaccc gcatgctggc gacgcgctcg ctcggctcgc ttgtgttttg
    14941 gggccccccc ggcacgggca agacgactgt ggcgcgactg ctggcgcagg caactgatct
    15001 gcatttcgag cagatctcgg ctatttttac cggcgtcgcc gatctcaaaa aagtcttcga
    15061 ggacgcgcgc agccgccgcg agttgggaca aggcacgctg ctttttgtcg atgaaatcca
    15121 ccggttcaac cgggcgcaac aggactcatt tcttccggtg atggaggatg gcaccatcat
    15181 cctggtgggc gcgacaacgg agaatccgtc cttcgagctc aacgcgccgc ttttgtcccg
    15241 tgcgcgtgtg ctcgttttcc gatcactcga cgcggctgcc atcgaaaagt tgcttgaaag
    15301 ggcggaaaag atcgagggca ggcggttgcc gcttgacgac gaggcgcgcg atgcgctcaa
    15361 gcgcatggca gacggtgacg gtcgtgcggc gttgaccttg gccgaagaag tctggcgctc
    15421 ggcgcgcaag gacgagatgt tcaatgcggc caagctgcag gacattgtgc agcggcgcgc
    15481 gccaatctac gacaaatcgc aggacggtca ctacaatctg atcagcgcgc tgcacaaatc
    15541 ggtgcgaggc tccgatcccg atgccgcgct ctactatctt tgtcgcatgc tcgatgcagg
    15601 cgaaccgccg ctgtatatcg cgcgccgcgt tgtgcgcatg gcgattgaag acattggact
    15661 tgccgatccg caggcgctcg tgatcgcgaa tgcggccaag gatgcttacg acttcctggg
    15721 ctcgccggag ggcgagctcg ccatagcgca agcggtgatc tactgcgcaa cggcacccaa
    15781 atcgaacgct gcgtatactg ccttcggcgc ggccatgcgc acggcgaagg aggccggctc
    15841 gctgttgccg cccaaacaca tcctcaatgc gccaaccagg ctcatgcagg acgaaggcta
    15901 tggccgtggc tacgcctacg atcacgatgc ggaagaagct ttctcgggac aaaactactt
    15961 cccggagtcg ctcgagcgcc agaaattcta tgacccgccc gaacgcggtt tcgagcgcga
    16021 tatcagaaag cgcctcgaat attgggcgaa gctgcgaaaa gaacggggcg agggatgagc
    16081 cggggacgtt caggcccgcg ccagcctggc ggcggccgtc aaatggctgg accgcggcat
    16141 cagcggctcc agacccggca tcatccggtg cgtccatccg aagtgcgcgc gcagcgagca
    16201 tcgaagggtg acagtcgtgg ccgcccatcc tttgagggcg gccggccgct gtcacgtcag
    16261 gaggacggtg aaaggtcgtt ggaggccacc ggcaaggtcc aaacggtcac tgtgaccccg
    16321 gacgaatccg gcatgcgggt cgaccgattt tttgaggcgc gttttccggg tctttcgttc
    16381 agccatatcc agcgcattat ccgcaaaggc gaggtgcggg tgaacggcaa gcgcacgcag
    16441 cccaaagccc gcctcgaagc tggatatgcg gttcgcattc cgccgctaaa aactgctccg
    16501 ccggctccgc gtgacgatgc cccgcaggct cagaaagacc gggcctttct caaatcaatc
    16561 acgctctacg aggatgccga cgtattggtg ctcaacaaac cgatggggct cgcggttcag
    16621 ggcggctccg gcacaatgcg ccacatcgac ggcatgctcg gcgctttgcg tggccccgac
    16681 ggccagcgtc ctcgactggt gcacagattg gacaaggata cggcgggctg cctgctggtc
    16741 gcgaagacaa ggtttgctgc gtctgagctg gcgaaaactt ttcggtcgcg ctcggcacgc
    16801 aagatctact gggctctcgt cgccggagta cccaggccga gacagggccg catatcgacg
    16861 tttctcgcca aagaggaacg cgacgaagat tcgatcatgc gcgtcgcggc gcatggcgaa
    16921 aaaggagcga gccatgccgt cacatactac gccgtcgtcg agacggcggc gcagcggctc
    16981 gcatggcttt cgctcaagcc ggttaccggg cgaacccacc agctgcgtgc gcacatggcg
    17041 cacatcgagc atccgatcgt gggcgatccc aaatacttca ccaaggaaaa ctgtgaactg
    17101 ccgggcggca ttcagaacaa gcttcacctt ctggccaggc gtatcgcagt accgcatcca
    17161 cgtggtggcg tgattgacgt gtcggcgccg ttgccgccgc acatggaaca gtcatggaat
    17221 ctgctgggtt ttgatgccaa acgctttgat ccgatcgagc aggcccccga ggagtagcaa
    17281 actgcctggg gtgttcgtat ctcgcggtga tgacccgcac gtacgctctt acgctcctcg
    17341 ttctgattgg gctaacggcc atgttcgccg tgccggcacg cgcgcaaagc gacatcatga
    17401 gcgacaatta cagcatcatg gttccggaga ggggttacaa accgtcgcgg ccggagcctt
    17461 ggctggcgcc gaaatacaag tcgccgcgcg ggaccgtgaa gcacgtgacc attccgaagc
    17521 cgacgaacgt gccgatgccg aacacacaag tccctcccga tttgtacgta cctcagaccg
    17581 ggcgcacgac gcctaacttg ccgacgctat ccggttcggg gcgtggtggt gtcgaaacgt
    17641 ttcaggatcg tgccatgcgc tgctctcatc aggctggcgt cttcggccaa ggtgccggcg
    17701 accgtggcag ctacatgggc gcgtgcctta atcaataatt agctttatgt atcacttgaa
    17761 gccggacacc ctcgtcttaa gggcgtttct tcaacttaag ctttggcttt aaaaagcgcg
    17821 tcaaatctcc tccatgacct gagcatagga gaggagcgcg aagagcgcgg taccgccgac
    17881 cacgttgccg atcagcacgg gcagcatgaa ctgagggatc atttgccacc acgcccagtc
    17941 gccggcgagc accagcagat aggcctccat gcttccggcg acgatatgcg taaatccgcc
    18001 gacagcgatc agccaggtca tcaatgtaat gacatggaac tgggcacgct cggcgccagg
    18061 catcagccag accatggcgg ccatcagaaa gccggcggcg atgctgcgaa aaatcgtctc
    18121 ccaccagcct aaggcaacca actcgcggct gaccgtcagc atgccatcgt agatctgctg
    18181 tggcagcacc ggcgtgaaag tgcagaataa cgcagcgaac agtgtgcccg cgagattggc
    18241 cgcaagcacg atcgcccaca ttcgcgccat gcgcccgaca ttggtccagg tgaggctggc
    18301 cataaccggc agcacggccg tgatggtaat ctcggtgaac aattgctgtc gtgacagcac
    18361 cgccatgata aatccgacgc agtagccgaa actgacaaca agcggttgcc agtctgcctc
    18421 cggcaagtgc gtttgcagga tcgcctgggt aagcagcgag aaactgatcg aaagcccggc
    18481 ggcaacgccc gaccaccaca gcgaggtcga cgggcgctcc atttcctctt cgccgaggcg
    18541 ccgcaccact tcgtaaatga ccggcgtgcg aggggtcgcc agttcttcga cgtccttgac
    18601 ttcatcttca gtgatgccgc gcgagtgccc gccgcgcgag cgcgaaccac tctgaagctt
    18661 gcggacggta ttggatgatt tggc
//
LOCUS       DATDHO010000139         2134 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_6537, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000139 DATDHO010000000
VERSION     DATDHO010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6537"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1241)
                     /locus_tag="VIY07_02700"
     CDS             complement(<1..1241)
                     /locus_tag="VIY07_02700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6380693.1"
                     /translation="MDHIERAGHSAADTPQRRGPSVRSTRGLDWFVFFLADVQTGFGP
                     FVAVYLTTEKWTQVEIGLILSVSGLTSLLGQVPGGALVDWARSERLVAGLAVALIGVS
                     ALAYAVLPIFPVVLCAALLHAASSCVLGPSIAAISLGLVGRSSISQRLGRNARFASIG
                     AGVAAAVMGTFGYLLSSRAVFLVTVALAVPTVLALACIRADDINPDRAHGAIPRTDSK
                     GPSTTSIAVLARNRPLLEFALIVMLFQFANASMLPLVGSFMTTQSASWAPALIAACMI
                     VPQIVVAAMSPWVGRRAQSWGRRPLLLIAIGALVCRGMLFAFVRDPYLLVIIQLLDGI
                     SAAVLSVLIPLVVVDVTYGSGHFNLAQGFVGTATGLGASVSMVFAGYLSDHFGNEIAF
                     LSLTASAATAFALVWLMMPETR"
     gene            complement(1267..1752)
                     /locus_tag="VIY07_02705"
     CDS             complement(1267..1752)
                     /locus_tag="VIY07_02705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEY6380694.1"
                     /translation="MRVKRSDIGLVLAAILLVALPQVVAATDGPKPESSPAAAEPTVT
                     VIYGAAVRGILGRTVQGADGKDMGRIVDIMVDPGGQVRAAIIDFGGFLGVGSRKIAVS
                     WNALHFAGAVKKRDDIKLEATRDELKAAPEYRDGNPVVVIGSTGALETLDFPPATTPE
                     K"
     gene            complement(1862..>2134)
                     /locus_tag="VIY07_02710"
     CDS             complement(1862..>2134)
                     /locus_tag="VIY07_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380695.1"
                     /translation="SPILLLDEATASLDGDSEEAVREALLRLMQRRTVIAIAHRLSSL
                     RNFDRIVVLRSGRVIEDGSPDQLMKRKGAYYELMCREMNRLTRRAA"
BASE COUNT          509 a          662 c          594 g          369 t
ORIGIN      
        1 cgggtttcag gcatcatcag ccaaaccaaa gcaaacgcgg tcgccgcgct ggctgtcagt
       61 gacaaaaacg cgatttcgtt gccaaagtga tcactgagat acccggcaaa gaccatactg
      121 accgaggcgc cgagcccggt cgcggtgccg acaaatcctt gtgcgagatt gaagtggccg
      181 gatccatagg tgacgtcaac gacgaccaaa ggtatcagaa cgctaagcac cgccgccgaa
      241 atgccatcca gcagctggat gatcacgagc aaatacggat cgcgcacgaa tgcaaacagc
      301 attccgcggc ataccagcgc gccgatggca atgagcaaga gcggacggcg tccccagctt
      361 tgggcccgcc ggccaaccca gggcgacatt gccgcaacta caatctgcgg cacgatcatg
      421 caggctgcga tcagcgcagg cgcccagcta gcggactgcg tcgtcatgaa gcttcctacc
      481 agtggaagca tcgacgcgtt ggcgaactga aacaacatca caatcagggc aaactcgagc
      541 agcggccggt tgcgcgcaag aactgcaatg cttgttgtcg atggaccttt gctatccgtt
      601 cttgggatgg cgccgtgtgc ccggtccggg ttgatatcgt ccgctcgtat gcacgcaagc
      661 gctaatactg tcggaaccgc cagagcgact gtcaccagga acacggctcg actcgacaac
      721 aaatatccaa atgtacccat taccgccgcg gccactcctg caccaatgga ggcgaagcgg
      781 gcattacggc ccaatcgttg gctgatcgac gatcggccga caagacccag actgatggcg
      841 gcaatcgacg ggcctagcac gcaactgctg gccgcatgga gcagcgcggc acatagaacg
      901 actggaaaga ttggcaagac ggcataggcc aacgcactca cgccgatcag tgcgacagcc
      961 agaccggcga ccaatcgctc ggaccgcgcc caatcgacca gtgctcctcc cggcacctga
     1021 ccaagcagcg aagtcaaccc gctcacggaa agaatcaggc cgatctcaac ctgggtccat
     1081 ttctccgtcg tcaaatagac tgcgacgaag gggccaaaac cggtctgcac atcggcaaga
     1141 aaaaacacga accaatcgag gccacgcgtg ctgcgcaccg aaggtccgcg gcgctgcggt
     1201 gtgtcagcag ccgagtgacc agctctctca atatgatcga taggttgcgt tgcttgcgca
     1261 aacaggtcat ttctccggtg tcgttgcggg tggaaaatcc aacgtctcca aggcgccggt
     1321 tgagccgatg acaacaaccg gattgccgtc ccgatattca ggcgcggcct tcaactcatc
     1381 ccgggtcgcc tcaagtttta tgtcgtcgcg tttcttgacc gcaccggcaa aatgcaaagc
     1441 gttccagctt acagcaatct tgcggcttcc aaccccaaga aaaccgccaa aatcgataat
     1501 ggcggcgcgc acctgccccc ccggatcgac catgatgtcg acgatacgac ccatgtcctt
     1561 gccatcagcc ccttgcaccg tccggccaag gattccccgc actgccgcgc cataaatcac
     1621 ggtaacggta ggttctgccg ccgcaggtga ggattcaggt ttgggaccat ccgtggctgc
     1681 cacgacttgc ggcagagcta cgagcagaat cgcagccagg acgaggccaa tgtcggatcg
     1741 cttcacgcgc acgaagccct ccgtgtccga agagggaaag cgaatgccga actcggcgtg
     1801 atcggcaatt gttctacggt gccgcagtcc gctcacgcaa ccgatcgaaa atgaatcgcg
     1861 cctacgcggc acgtctggtc agacgattca tttcgcggca catcagttcg tagtaagcgc
     1921 ctttgcgctt catcagttga tccggcgagc catcttcgat cacgcgaccg gatcttagca
     1981 cgacaatgcg gtcgaaattg cgcaagctcg aaagccgatg cgcaatcgct atgacggtac
     2041 gtctctgcat tagtcggagg agagcttcgc gaacagcttc ctcggaatcg ccgtccagtg
     2101 aggccgtggc ctcatcaagc agcaggatcg gtga
//
LOCUS       DATDHO010000140         2191 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_403052, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000140 DATDHO010000000
VERSION     DATDHO010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2191)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2191)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2191
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403052"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..433)
                     /locus_tag="VIY07_02715"
     CDS             complement(164..433)
                     /locus_tag="VIY07_02715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380696.1"
                     /translation="MKKFLTTLAVLAAFVTPAFAQSFDPDNGTCNVLPFSHKSIAPHK
                     VITAVRPSGLHSFAMVPRHDPAFNSNSPEATGGGSLGYNELLRTY"
     gene            767..1699
                     /locus_tag="VIY07_02720"
     CDS             767..1699
                     /locus_tag="VIY07_02720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY6380697.1"
                     /translation="MAERDEGLSRRKVLECMTWAGTGVLWTIAGGVPTSLGIIDEAVA
                     ARQKGFTFLQISDSHMGFDKPANPNAKGTLEEAIARVKALPVKPSFMIHTGDISHLSK
                     PSEFDDAERIISQARLDVHYVPGEHDLLDEEQGKLYRDRYGRGTKGAGWYSFDADGVH
                     FIGLVNVVDLKAGGLGNLGDEQLEWLEDDVKGRSASQPIVVFAHIPLWTVYPDWGWGT
                     QDGARALGYLKKFGSVTVLNGHIHQVMQKVEGNVTFHTARSTAFPQPPPGTAPSPGPM
                     KVPEDKLRGMLGIASVTFKQNEQRLAIIDTSLQG"
     gene            1708..2070
                     /locus_tag="VIY07_02725"
     CDS             1708..2070
                     /locus_tag="VIY07_02725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin family copper-binding protein"
                     /protein_id="HEY6380698.1"
                     /translation="MIKTKSLKNILVAGVAAFLLLAATPVSAADATVVKIGNFTFGPQ
                     ELKIKAGTTITWTNEDDIPHTVVSPNNFRSKVLDTDGTYSFTFTTPGTYKYFCSLHPH
                     MTGTIVVEAVTGSIAPPQ"
BASE COUNT          484 a          604 c          634 g          469 t
ORIGIN      
        1 ggagatatgc gcccacgtcc aggcgttgac catgtccagc catatcattg gtcgtaacct
       61 ttaagggtct ccgctatata tcgcgtaggt cgcgcgaatt tccggccaga caaaccggga
      121 aaagagggcg cgccaaggac ccgccctctt tgtgttcgtc agcttagtag gtacgaagca
      181 gttcattgta gccgagactc ccaccgcctg tggcttccgg gctgttcgaa ttgaaagccg
      241 ggtcgtgtcg cggaaccatg gcgaaagagt gcagcccgct cggacggacc gctgttatga
      301 ctttatgagg agcgatcgat ttgtgtgaga acggcagcac gttgcaggtg ccgttatcag
      361 gatcgaacga ctgcgcaaat gccggggtta cgaaagcggc cagcaccgcc agggtggtta
      421 gaaacttctt catgtcactt ctcctgtggt tgagacttag aattttcgag agggtttaca
      481 cgcaggagga gactgcagaa cgtctgggat attcctcgcg gtcgttggcc gccgcttcat
      541 tttgcatgac gtttttatga aacaagtttg aaaagatttc ccgggaatga ataattttcg
      601 agcgccggga gttcgctgtg aagattcatg tcgagcagta atgcggcatg ctccaattcg
      661 gagcagcgtc ggtgacatct ttgtgatgtt acatcgtgca ggaataaatc gtcgtcatga
      721 tcagtctccc ctgcgtagac acaaactcgt tgcaggagac ttcgacatgg cagaacgtga
      781 tgagggcttg agccgccgca aggtactcga atgcatgacc tgggcaggca ccggcgtgct
      841 ttggacgatt gcaggcggcg tgccgacctc actcggtatc atcgacgagg cagtggccgc
      901 gcggcagaag ggctttacct ttctgcagat cagcgacagt cacatgggct tcgacaagcc
      961 ggccaatccc aatgccaaag gtacgctgga ggaagcaatc gcacgcgtga aggcgttgcc
     1021 agtaaagcct tcattcatga ttcacactgg cgatatttcg catctgtcga aaccttcgga
     1081 attcgacgat gccgagcgca tcatctcgca ggcgcggctc gatgtacact acgtgccggg
     1141 cgagcacgat ctgctcgacg aagagcaggg caagctctac cgcgaccgct acggacgcgg
     1201 caccaagggc gccggctggt acagcttcga cgccgacggc gtgcacttca tcggcctcgt
     1261 caacgttgtc gatctcaagg ccggcggtct cggcaatctc ggcgacgagc agctcgaatg
     1321 gctggaagat gacgtgaagg gacgttcagc ctcgcagccg attgtcgtgt tcgcgcatat
     1381 ccccctctgg acggtctatc cggactgggg ttggggcacg caagatggcg cgcgtgcgct
     1441 cgggtatctt aagaaatttg gctcggtcac ggtgcttaat ggccacatcc atcaggtcat
     1501 gcagaaagtt gagggcaacg tcacgtttca caccgcgcgc tcgaccgcat tcccgcaacc
     1561 gccgccaggc accgcacctt cgcctggccc catgaaagtg ccggaagaca agctgcgcgg
     1621 aatgctcggc atcgccagcg tcaccttcaa acaaaacgag cagcgtttgg ccatcattga
     1681 cacatcgttg cagggttgag tgcaaacatg atcaaaacga aatcgctaaa gaacattcta
     1741 gttgcgggtg tcgcggcctt cctcctcttg gcggcgacgc cggtctcggc ggcggatgcg
     1801 acagtagtca agatcggaaa cttcaccttt ggtccgcagg aactgaagat caaagcggga
     1861 acgaccatca cctggactaa cgaggacgac atcccgcaca cggttgtgtc gcccaacaac
     1921 ttccgctcca aggtgctcga taccgacggc acgtactcgt ttacgttcac gacgccgggt
     1981 acctataaat atttttgttc tctgcatccg catatgacag ggacaatcgt cgtcgaggcg
     2041 gtgaccggaa gcatcgcgcc tccacaatga atgtctgctt ttggcaaagt tgctgagtcg
     2101 cgcatcgaac ggaggttcca aatgagcgca ttttcagact catatgtgtc gagagtgttg
     2161 cttgcgatcc cagcgttccc gcttcgccgc c
//
LOCUS       DATDHO010000141         2120 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_155296, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000141 DATDHO010000000
VERSION     DATDHO010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_155296"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..854
                     /locus_tag="VIY07_02730"
     CDS             <1..854
                     /locus_tag="VIY07_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380699.1"
                     /translation="DIYLLEAIINGILLGGVLALLALGLNLIFGVIDVVWIAYADIVM
                     CGMYVIYFLYAQYGVPLPIACLVAIVAMAAFGILVHLLIIAPVLNSPPINQLLATGGL
                     LFFLQSFATLLFGTDFRNIGVRLPILEIATLYISFSRLIAFVIGLIGAVALYLFLKRT
                     YIGTAIRAIAQDREIVGLMGVDQRRIYLVTSAIGGALAGLAACLLALQYDVHPFIGNT
                     FGPVIFMICVLGGLGNMIGGFIASFIISQIIAIGGYYSNIELSYVLAFTFFIVLMFLR
                     PRGIFAR"
     gene            851..1828
                     /locus_tag="VIY07_02735"
     CDS             851..1828
                     /locus_tag="VIY07_02735"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380700.1"
                     /translation="MSISRISMLVGLAILIALPVVVPPYFLHLLIQILLWAFIYTAWA
                     LMGRFGFVSFGHGAFMGVGAYVPALLWSYYDVTPWIGIPIGIALSILLAVIIGYPCFR
                     LRVVGHYFALVTLALSQVVLLSLTAARDITGGSLGFTPRAVGHSWYALQFPDKAYFYA
                     ISVVLWLIGLYVWRRIDLGINREALEAISEDEDAAAAVGINVLREKLRVTIISAALTA
                     LGGAIYGQYFMYLNPETVSGIAVSLQIVFAVIAGGVYSLLGPTVGSLLTLSLTEGLRV
                     WFGTNFIGAANTIYGILLILCIIFMPQGIVGALQGLRLRRSQTKVAPAE"
     gene            complement(1835..>2120)
                     /locus_tag="VIY07_02740"
     CDS             complement(1835..>2120)
                     /locus_tag="VIY07_02740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6380701.1"
                     /translation="FANITPNNHLMSYLTDEEKLAGVYITEKVDRKTGWQYVCLEEEW
                     TRGYLQEIQDFMECVARGRQPVAGLDLAYETIKINYAGYWSADEGRRVTL"
BASE COUNT          333 a          621 c          593 g          573 t
ORIGIN      
        1 tggacatcta tctgctcgag gcgatcatca acggcattct gctcggcggc gtgttggccc
       61 tgctcgcgct tggcctgaac ctgatcttcg gcgtaatcga cgttgtctgg atcgcctatg
      121 ccgacatcgt catgtgcggc atgtatgtga tctattttct ctacgcccaa tatggagtgc
      181 cgctcccgat tgcttgcctg gtcgcgatcg tggccatggc cgcgttcggc atcctcgttc
      241 atctgctcat cattgcgccg gtcctcaact cgccgcccat caaccagctt cttgcgaccg
      301 gcggcttgtt attctttctg caaagctttg cgacgctgct gttcggaacc gacttccgca
      361 atatcggcgt gcggctgccg atcctcgaga ttgcaacact ctatatcagc ttctcgcgac
      421 tcatcgcgtt tgttatcgga ctgattggcg cggtcgcgct ctatttgttt ctcaagcgca
      481 cgtatatcgg cactgcaatt cgcgccatcg cacaagaccg tgaaatcgtc ggtctcatgg
      541 gtgtcgatca gcgtcgaatt tatctggtga catcggcgat tggtggcgca ctggccgggc
      601 tagccgcctg cctccttgct ctgcaatatg atgtgcatcc attcatcggc aatacgttcg
      661 gcccggtcat tttcatgatc tgcgtgctcg gcggacttgg caatatgatc ggcggcttca
      721 ttgcctcctt catcatcagt cagatcatcg cgattggcgg ctattattcc aatatcgagc
      781 tgtcctacgt gctcgcgttc acatttttca tcgtgctgat gttcttgcgc ccgcggggga
      841 tattcgcgcg atgagcattt cacgcatatc catgcttgtg gggctcgcga tactcattgc
      901 gctgcccgtg gtcgttccgc cctattttct gcacctgctg atccagattt tgctgtgggc
      961 attcatttat acggcgtggg cgctaatggg acgcttcggc ttcgtctcgt ttggtcacgg
     1021 tgcatttatg ggtgtaggcg catatgtgcc ggcactgctt tggagctatt acgacgtcac
     1081 gccatggatc ggcattccga tcggcatcgc gctttcgatt ctgcttgcgg tcatcatcgg
     1141 gtatccctgc ttcagactta gagtcgtcgg ccactatttc gcgctggtta cgcttgcgct
     1201 cagccaggtc gtgctgcttt cgttgacagc tgcgcgcgac atcacgggtg gttcgctcgg
     1261 cttcacgcca cgggccgtcg gccattcctg gtacgcgctg caatttccgg acaaggccta
     1321 tttctacgcc atttcagtgg tgctgtggct tatcggactt tatgtctggc ggcgcatcga
     1381 tctcggtatc aaccgagagg cacttgaggc gatttccgag gacgaggatg ccgccgcggc
     1441 ggtcggcatc aacgtgctgc gcgaaaagct gcgcgtgacg atcatcagcg ctgcgctgac
     1501 cgccctcggc ggcgcgatct atggccagta tttcatgtat cttaatcccg agacagtgtc
     1561 gggcattgcg gtgtcgctgc agatcgtctt cgcggtcatt gctggcgggg tgtattcgct
     1621 tctggggccg acggttggct cgctgctcac gctgtcgctg accgaagggc tgcgcgtgtg
     1681 gttcggcacc aacttcattg gggccgccaa cacgatctac ggcattctcc tcattctctg
     1741 cattatcttc atgccgcaag gcatcgtcgg agcgcttcaa ggtcttaggc ttcgccgatc
     1801 gcagaccaag gtggctccgg cggaatgatc gcgttcacag cgtgacccgc cgcccttcat
     1861 cggctgacca gtagccggcg taatttatct tgatcgtttc gtatgccaga tcgagaccgg
     1921 cgacgggttg gcgtccacgc gcgacgcatt ccatgaaatc ctggatctcc tgcaaataac
     1981 cgcgcgtcca ttcctcttcc aggcagacgt attgccagcc tgtcttgcgg tcgaccttct
     2041 cggtgatgta gacgccggcg agcttctctt cgtccgtcag gtagctcatc aggtggttgt
     2101 tcggcgtgat attggcgaac
//
LOCUS       DATDHO010000142         3513 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_403193, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000142 DATDHO010000000
VERSION     DATDHO010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3513
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403193"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..759
                     /locus_tag="VIY07_02745"
     CDS             <1..759
                     /locus_tag="VIY07_02745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HEY6380702.1"
                     /translation="GGQVIGQALVAAVRTVEGRPPHSLHAYFLLPGDPKVPIIYDVDR
                     IRDGKSFTTRRVTARQHGHPIFSMAVSFHTDEPGLDHQAQMPNVPPPEKLPSDADMRE
                     KLLPTMPDPVRRYYERERPIELRPVEFERYLGKKIPGGQFNVWIRTTGKLPDLPAIHQ
                     CVLAYASDMMLLDTALAPHGRTLFEKEFMAASLDHALWLHRPFRADDWLLYAQDSPNL
                     HGSRGFARGLIFTRDGTLVASVAQEGLVRQRRET"
     gene            767..1552
                     /locus_tag="VIY07_02750"
     CDS             767..1552
                     /locus_tag="VIY07_02750"
                     /inference="COORDINATES: protein motif:HMM:NF022599.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2927 domain-containing protein"
                     /protein_id="HEY6380703.1"
                     /translation="MKQLLAGCFALIAVVTAALGASGRQPPPPGSFEGAPDQYTQFTA
                     PELTRGFLALAFGSDLRIGARPLGIRRFDHAVRARIIGGGTIDRSNEMARVIEEYARE
                     VPGLQLSIVPPTAPADIELRLIDEKDFQSALQAAFGAKVARTFVSRTDPQCMTSVKST
                     ADGNIVHSVSFIIVDKGDDVFLDCAYHELLHALGLSNHDQHNPWTTLNQKRMVGYLTV
                     YDRYLLTLLYDSRIKPGMTVRQAQAVLPRAIADLGIATPSRGR"
     gene            1741..2079
                     /locus_tag="VIY07_02755"
     CDS             1741..2079
                     /locus_tag="VIY07_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEY6380704.1"
                     /translation="MKFVIAVIKPFKLDEVRDALTRIGIHGMTVTEVKGYGRQKGHTE
                     IYRGAEYQVNFLPKLRLEIAIASEQLDQVIEVIAAAARTGQIGDGKIFVMPVERAMRI
                     RTGETDVDAL"
     gene            2108..3418
                     /locus_tag="VIY07_02760"
     CDS             2108..3418
                     /locus_tag="VIY07_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEY6380705.1"
                     /translation="MTRAFLRLALTAVAASAASPVFAQEPKIDAGDTAWMIGATGLVL
                     MMTIPGLALFYAGMVRKKNVLATMAQSLAATFLVSVVWALIGYSLAFTGEGAFIGTLD
                     RIFLTGVTLDAISPLAKTIPESLFMIYQMTFAIITVALVAGSVADRLRFSAFLLFCVL
                     WLLIVYVPIAHWVWGGGFLGTYGLIDFAGGTVVHLNAGVAGLVAAYVVGARRGYGSEN
                     LAPYDLALAVIGTGLLWVGWFGFNGGSALGANSRAAMAIVATHLAASMGAFTWMALEW
                     WTRGKPSVLGMISGAIAGLGTITPASGFVLPMQAVLIGLVAGAFCFWACTWLKLKIGY
                     DDSLDVFGVHGVGGFTGTLLAGVFAVGALSATPELPGGVHGLLEGNPQQIVAQLYGIV
                     VTLVWSGALTFVILKVIGALVPLRVRQEDEVMGLDVTLHGEALQ"
BASE COUNT          639 a         1040 c         1064 g          770 t
ORIGIN      
        1 ggcggccaag ttatcgggca ggccctcgtg gctgccgtac gcacagtcga agggcggccg
       61 ccgcactcct tgcacgccta ctttctgcta ccgggcgacc ccaaggtgcc gatcatctat
      121 gacgtcgatc ggatccgcga cggcaaaagc ttcacgacgc ggcgcgtgac cgctcgtcaa
      181 cacggacatc caatcttttc catggcggta tcgttccata cggacgagcc cggcctcgat
      241 caccaagccc agatgcccaa cgtgccgccg ccggaaaaac tgccgagcga tgccgacatg
      301 cgcgaaaaat tgcttccgac gatgcccgat ccggttcgcc gctattacga acgcgaacga
      361 cccatcgaac tgcggccggt cgagttcgag cgttatctcg gcaagaaaat tcccggtggg
      421 caattcaatg tctggatccg cacgaccggc aagctgccgg atctgccggc cattcatcaa
      481 tgcgtgctgg cctacgcttc cgacatgatg cttctcgata ctgcgcttgc gccacacggt
      541 cggacgctgt tcgaaaaaga attcatggcc gccagccttg atcacgcact gtggctgcac
      601 cgcccgttcc gtgccgatga ctggctgctg tacgcacagg attcgcccaa tctgcatggc
      661 tcgcgcggct tcgcgcgcgg acttatattt acgcgcgatg ggacgctcgt cgcctcggtg
      721 gcgcaggaag gcctggtccg acagcggcgc gaaacctgac ttggacatga agcaattatt
      781 ggcgggctgc tttgccctga ttgcagtggt gacggccgcg ctgggcgcat cgggcagaca
      841 acctccgccg cccggttcgt tcgaaggcgc gccggatcaa tacacgcaat ttacggcccc
      901 ggaacttacg cgcggttttc tcgcactggc attcggatct gacctgcgca tcggcgcgcg
      961 tccgctcggc attcggcggt ttgaccatgc ggttcgggct cgaatcatag gtggcgggac
     1021 gatcgaccgc agcaatgaaa tggcccgcgt cattgaagaa tatgcgcgcg aagttcccgg
     1081 cctgcagctg agcatcgttc cgccgactgc tccggcggac atcgagcttc ggcttatcga
     1141 tgagaaagat tttcaatcgg cattgcaggc ggccttcggt gccaaggtcg ccaggacctt
     1201 cgtctctcgg acagatccgc agtgcatgac cagcgttaaa tcaactgccg atgggaatat
     1261 cgtgcactcg gtatccttta tcatcgtcga caagggcgat gatgtgttcc tcgactgtgc
     1321 ctatcacgaa ctgctgcacg cgctcggtct atcaaatcac gatcagcaca atccgtggac
     1381 cactctcaat cagaaacgta tggtgggcta cctgaccgtt tatgaccgct atctgctgac
     1441 cttgttgtat gattcacgca tcaagcccgg catgaccgtg cggcaggctc aggccgtctt
     1501 gccaagagcg atagccgatc tcgggattgc aacgcctagt cgggggagat gagtcaacta
     1561 tgctgaccta ccctgcctgg aaatggggcc tcctgcctgt gggtagagca acaggtccgc
     1621 ttaatcttta cgcggtctac cgctagctta cgcgtatgac ctgcacccgc tcggagtgga
     1681 gcgggatttc tatgccattg ggcagttgtt tctcgagccg ttcggcgggg gctagtgatc
     1741 atgaagttcg tcatcgctgt cataaaacca ttcaagctcg acgaggtgcg ggatgcactc
     1801 acgcgtatcg gcattcacgg aatgacggtg accgaagtga aaggctacgg ccggcaaaag
     1861 ggccacaccg aaatctatcg cggcgccgaa tatcaggtga attttcttcc caaacttcgc
     1921 ctcgaaatcg cgatcgccag cgagcagctg gaccaggtga tcgaagtgat cgccgccgca
     1981 gcacgcaccg gccagatcgg cgatggcaag attttcgtca tgccggtcga acgcgccatg
     2041 cgcattcgaa ccggtgagac ggatgtcgat gcgctctaga aaaacagatg gaacctgagg
     2101 ggatgacatg acacgggcct tcctgcgcct cgctctgacc gccgttgctg catccgcagc
     2161 gtcaccggtt ttcgcgcaag aaccaaagat cgacgccggc gacacggcct ggatgatcgg
     2221 cgcgacgggt ctggtgctga tgatgacaat cccgggcctg gctctttttt acgcaggcat
     2281 ggtgcgaaag aagaatgtgc ttgccaccat ggcgcaaagt ctggcggcga ctttccttgt
     2341 ttccgtggtg tgggctctca tcggttacag cctggcgttc acaggcgaag gtgcgttcat
     2401 cggaacgctt gatcggattt tccttacagg cgtgacgctg gatgcgatct caccgctggc
     2461 caagacgatt ccggagagcc tgttcatgat ctatcagatg acattcgcga tcatcacggt
     2521 cgcgcttgtc gcgggctccg tcgccgatcg tctccgcttc tctgcgttcc ttttgttttg
     2581 tgtgctttgg ctgctcatcg tctacgtgcc gattgcgcat tgggtctggg gcggcgggtt
     2641 tctcggcacg tacggcttga ttgatttcgc gggtggtacg gtggtgcatt tgaatgcagg
     2701 cgtcgccggc ctggtggccg catatgtggt tggcgcgcga cgcggatacg gcagcgagaa
     2761 ccttgctccc tacgatctcg cgctcgcggt gattggcacc ggcctgttgt gggtcggctg
     2821 gtttggcttc aatggcggtt ctgccctcgg tgcgaattcc cgcgcagcga tggctattgt
     2881 cgcgacgcat ctcgccgcca gcatgggcgc cttcacctgg atggcattgg agtggtggac
     2941 ccgcggcaag ccatcggtcc ttggcatgat ctcaggagcg atcgccggat tggggaccat
     3001 tacacctgca tccggttttg tgctgcccat gcaagcggtg ctgatcgggc tggtcgccgg
     3061 cgcgttctgc ttctgggcct gtacctggct caagctcaag atcggctatg acgactcgct
     3121 cgacgtgttt ggcgtccacg gcgtcggtgg atttaccggc accttgctcg ccggtgtctt
     3181 tgcggtgggc gcgttgtcgg caactccaga gctgccggga ggcgtgcatg gcctcctcga
     3241 gggcaatcca cagcagatcg tggctcaact ttatggaatc gtcgtcacgc tggtgtggtc
     3301 gggagcactg accttcgtca tccttaaagt catcggcgcc ttggtcccat tgcgcgtgcg
     3361 ccaagaggac gaggtgatgg gtctggacgt cacccttcac ggtgaggccc tgcagtagtc
     3421 cgtaccggag gtccaaatag ggcctgctca aattttgagc aggccgctca cctactggcg
     3481 cgtctttaag cgaccgctcg gggcagtgcc tcc
//
LOCUS       DATDHO010000143         2768 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_304033, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000143 DATDHO010000000
VERSION     DATDHO010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2768
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304033"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..846
                     /locus_tag="VIY07_02765"
     CDS             <1..846
                     /locus_tag="VIY07_02765"
                     /inference="COORDINATES: protein motif:HMM:NF025910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6380706.1"
                     /translation="YLDALEDNKAAVKVDEKYLTDTNAPMGVYRLGYYPHNVHFVMAS
                     AQLAGDGQTVIAAAEKLRELIPDQAARGIAMVQPVKAAPYFAHAQFSSPETILALPDP
                     GDTIPYIKAMWLYARGVALAARRDFAGAATAADSIETIERTADFKLLKESNVPAQEVL
                     RIARTLVLARVAQAKGDNRTAVVRFERAAALQDALPYTEPPYWYYPIRQSLAAVLLQA
                     GRYADAERQFQGALSRAPSNGWSYYGLAELYKARGNTAAARKAEADLARTWIGDRGLL
                     RISNL"
     gene            complement(998..1507)
                     /locus_tag="VIY07_02770"
     CDS             complement(998..1507)
                     /locus_tag="VIY07_02770"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6380707.1"
                     /translation="MLHRLLRLFVFAAAAAILAASPARAAAEKVPYTGDAKPGTIVIQ
                     SEERSLYLITGKDQALKYSVGVGRTGKQWFGTTRIASKHIRPAWKPPASLRGKRSPDF
                     YIEGGSPQNPMGAAALVLVHSELAIHGTNNPGSIGSLVSAGCIRMHNRDIMDLYGRVR
                     VGTQVVFAK"
     gene            1884..>2768
                     /locus_tag="VIY07_02775"
     CDS             1884..>2768
                     /locus_tag="VIY07_02775"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY6380708.1"
                     /translation="MDVRFCRRWLVVALAVLAPLTSVSAQSLPRSVLVLDQSDADSAW
                     FEAFSSSFRATLNAKSATQISVYSEHIDLNRFSGPRHDDVVRTFLHDKFSERPIGVIV
                     AQGSGALDFLTRANLWPNTPVIMAAVDDAAVARLRLPPNVTGTTYRLTFHDAVASAKM
                     LVPNLKRIALVGDPFERQAVRGHFKEEIPAAVGGLEVIDLLGLPMTELSKRVAVLPED
                     TAIIYTAINTDGAGVVYHPHEALKAFSQVANRPIVIDAETSVGYGGTGGLIVSPRLVG
                     ADTADLVLRILDGQKPSEI"
BASE COUNT          508 a          822 c          847 g          591 t
ORIGIN      
        1 tatcttgacg cgctggagga caacaaggct gcggtcaagg tcgatgaaaa atatctaact
       61 gataccaacg cgccgatggg cgtctatcgg ctcggttact atccgcataa cgtgcatttc
      121 gtgatggcgt cggcgcagct ggcgggggac ggccagaccg tgatcgcggc ggcggagaag
      181 ctgcgcgagc taattcctga tcaggccgcg cgtggtattg cgatggtcca acccgtcaag
      241 gcggcgccat atttcgcgca cgcgcagttc agctcacccg aaaccatcct cgcgctgccc
      301 gaccccggcg acaccatccc gtatatcaag gcgatgtggc tctatgcgcg gggcgtagca
      361 cttgcggcgc gccgggactt cgcgggtgcg gcgacggcgg ctgattcgat cgaaacgata
      421 gagcgcactg ccgacttcaa gttgctgaag gagtccaacg ttccggcgca ggaggtgctt
      481 cgcattgcgc gcacgttggt cctggcgcgc gtcgcccagg ctaaaggcga caaccgcacg
      541 gccgtcgtac ggtttgagcg agcggccgct ttgcaggacg cgctgcccta taccgagccg
      601 ccgtattggt actacccgat ccggcagtct ctcgccgccg tcctgctgca ggctggccgc
      661 tacgctgacg cggagcgaca gttccagggt gcgctcagcc gcgcgccatc caatggctgg
      721 tcgtattacg gtctggcgga actgtataag gcacgcggca acaccgccgc ggcgcgcaag
      781 gccgaggccg accttgccag aacctggatc ggcgaccgcg ggttgttgcg gatttccaat
      841 ctatgagttc gcgtcgatgc cgggctgatg cgggtggcat gtcggctata gggcaccggc
      901 ttacacgcac cttggcccta tgccattgca agggctggat tgtccgacat ctctcgaccg
      961 caccacaaaa attttttgtg cagattgcga aggcgattca ctttgcaaac accacctgcg
     1021 taccgacacg gacgcggccg tacaggtcca tgatgtccct gttgtgcatg cggatgcagc
     1081 ccgcggacac caggctgcca atcgagccag gattgttggt accgtggatg gcgagttcgc
     1141 tgtggaccag taccagcgcg gctgcgccca tcggattttg cggcgagcca ccctcgatat
     1201 agaagtctgg cgagcgttta ccgcgcagcg acgcaggcgg tttccacgcc ggcctgatgt
     1261 gtttgctggc gatccgcgtg gtgccaaacc attgcttgcc ggtgcggccg acgccgaccg
     1321 agtacttgag cgcctgatcc ttgccggtga tgagatagag gcttcgttcc tcgctctgta
     1381 tgacgatggt accgggcttg gcatcgccgg tgtatgggac cttttcggcg gcggcacgcg
     1441 ctggcgaggc cgcgaggatg gcggcggcgg cggcgaaaac gaaaagacga aggagacgat
     1501 gcagcatggc ggtgctcctg gttaacgcga ccggtgcggc ggaaaaaata gcctaattcc
     1561 ggcgcatgcg cctgcgaaaa ccaccgattt cgttaatggc gcccagcgcc ccgaggccct
     1621 ccattcgttt gtattgatcg gattcaccat tctgaccttc tgtcggctta cgcctgacgc
     1681 aaatatatgc tgggcaaaat tctgctaata attgtccctg cggcttcgac cctgactcac
     1741 gtcccactat cagtttggcc gggtctgtta gcgcgcgcct tctctcccag tcctcttgta
     1801 gatttggcat aagccccgtt ggccattggt ccaactcaat tttccgtggt cgtgtgatac
     1861 acaccgcgcc aggcgatctt gacatggatg tcagattttg caggcggtgg ttggttgttg
     1921 cgcttgcggt tctagcgcca ctgacgtccg tttctgcgca atccttgcct cgatcggtgc
     1981 tggtcctcga tcagtcggat gccgacagcg cttggtttga agcgttttct tcctcgtttc
     2041 gagccaccct gaatgccaaa tcggcaactc agatttcggt ctattccgaa cacatcgatc
     2101 tcaaccggtt ttcagggcct cgtcacgatg atgtcgtgcg cacattcttg catgacaagt
     2161 tcagcgaaag gcccataggt gtaattgtgg cacaagggtc tggagcgttg gactttctga
     2221 cgcgcgcaaa cttgtggccc aatacccccg tgatcatggc agccgttgac gacgcggccg
     2281 tggcccgatt gcggctgccc cctaacgtca ccggtaccac gtatcggctg acgtttcacg
     2341 atgctgtcgc gtcagccaag atgctggttc cgaatctgaa gcggatcgcg ctggtgggcg
     2401 atcccttcga acgccaggcc gtacggggcc atttcaagga ggaaatcccg gccgctgtgg
     2461 gaggactcga ggtcatcgac ttgctgggat tgccgatgac ggaactgtcg aagcgcgtag
     2521 ctgtgctgcc cgaggacacc gcaatcatct atacggcgat caataccgac ggcgccggtg
     2581 tcgtctacca tccgcacgaa gcgctcaagg ctttctccca agtggcgaac cggcccatcg
     2641 tcatcgatgc agaaacctcg gttggatacg gcggtaccgg aggtcttatt gtcagcccgc
     2701 ggttggtcgg cgcggatacg gctgacctcg tgttgcgtat tctcgatggc caaaagccat
     2761 ctgagatc
//
LOCUS       DATDHO010000144         1788 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_254540, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000144 DATDHO010000000
VERSION     DATDHO010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254540"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..471)
                     /locus_tag="VIY07_02780"
     CDS             complement(<1..471)
                     /locus_tag="VIY07_02780"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6380709.1"
                     /translation="MSVFTIGDATITRVEETNLPTYPARDIFPEFTDAHVVEHKSWLA
                     PHHYEAGTGLIRLAVHSWLLQVGGKKILIDSCCGNNKAKPGRPFWHMLNLPYLERLAA
                     AGARPEEIDMVMCTHLHHDHVGWNTQQKDGKWVPTFPNARYVFSKPDVDYFAKVD"
     gene            complement(480..950)
                     /locus_tag="VIY07_02785"
     CDS             complement(480..950)
                     /locus_tag="VIY07_02785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY6380710.1"
                     /translation="MKTLRQKLKVVSVPADSSEQGGYVLDDQTGFLMRVAMQRHTAIF
                     TSRMVAELTQTQFAALAKLYEGGPCSQNHLGRLIYLDAATIKGVVDRLHMRGFVTALN
                     DPNDRRRRAVALTERGRQVTEEAVRIATDITTTTLAPLTAEEQRQIVKLLRKLG"
     gene            complement(978..1706)
                     /locus_tag="VIY07_02790"
     CDS             complement(978..1706)
                     /locus_tag="VIY07_02790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380711.1"
                     /translation="MGETMLAVERLSAWYGAARILYDLSFEVGRGEVVALMGRNGAGK
                     STTMKAIMGLVALRAGTVRFSGEDISLKKPFEIARRGLGFTPEDRRIFVDLTVMENLD
                     VGRQPPRRLSDGTPAPSWTPEQLFKLFPNLAEMPDRLGGRMSGGEQQMLTVARTLMGN
                     PLLVLLDEPSEGVAPLIVEQMAHTILALKKQGLSILLSEQNIHFARLVSDRVYVLEKG
                     QIHWHGSVAELDTNVEVQRTYLTV"
BASE COUNT          369 a          560 c          489 g          370 t
ORIGIN      
        1 atcgaccttc gcaaaatagt ccacatccgg cttggaaaag acataccgcg cattgggaaa
       61 tgtcggcacc catttcccgt ccttctgctg ggtgttccag ccgacatggt cgtgatgcaa
      121 atgggtgcac atcaccatgt cgatttcctc cggccgcgcc ccggcggcgg caagccgctc
      181 caggtaaggc aaattgagca tgtgccagaa gggccgccca ggcttggctt tgttgttgcc
      241 gcagcacgag tcgatcagga tcttcttgcc gccgacctgc aacaaccagc tgtgaaccgc
      301 caaccttatc agtcctgtcc cggcttcata atggtgcggg gccagccagg acttgtgctc
      361 gaccacatgc gcatcagtga attccgggaa aatatcgcgc gccggatagg tcggaaggtt
      421 tgtttcctcg acgcgcgtaa ttgtggcatc gccaatagtg aatactgaca tcccccgagt
      481 catcccagct tgcgtagcaa ctttacaatc tggcgctgct cttccgccgt caggggtgca
      541 agcgtcgttg tggtaatatc cgttgcgatt cgcacggctt cctctgtcac ctgccttccg
      601 cgctcggtca gggcgacagc acggcgacgc cgatcgttag gatcgttgag cgcggtgaca
      661 aacccgcgca tgtgcaaacg atcgaccacg cccttaatgg tggcggcatc caggtagatc
      721 aagcggccca gatggttctg cgaacacgga ccgccttcat aaagcttggc cagcgcggca
      781 aattgagtct gggtcagctc cgcgaccata cgcgacgtga aaatcgcagt gtgacgctgc
      841 atggcgacgc gcatcaggaa gcccgtctgg tcatcgagca cgtagcctcc ttgctctgat
      901 gaatcagccg ggactgagac gaccttcaat ttttgtcgca atgttttcat gcctgcattc
      961 catcccgagt aatcatccta caccgtgaga tacgtccttt gcacctcgac attggtgtcg
     1021 agctccgcga ccgagccatg ccaatgaatc tgaccttttt ccagcacgta cacgcgatcg
     1081 gagaccaacc gcgcaaaatg gatattctgc tccgacagca atatcgacag cccctgcttc
     1141 ttcaatgcga gaattgtgtg ggccatctgc tcgacgatca ggggcgccac gccttctgaa
     1201 ggctcgtcga gcagcacaag cagaggattg cccatcagcg tgcgcgcgac ggtcagcatc
     1261 tgctgctcac caccactcat ccgtccccca aggcgatcgg gcatttcagc gagattggga
     1321 aacagcttga acagttgctc cggcgtccac gatggagcgg gtgtgccatc ggataagcga
     1381 cgcgggggct ggcgaccaac gtcgagattt tccatcacag tcagatcgac gaaaatgcgg
     1441 cggtcttccg gagtaaagcc cagtccgcga cgcgcaattt cgaacggttt tttcagcgag
     1501 atatcctcgc cactgaatcg caccgtgccc gcgcgcaggg ccaccaggcc catgatcgct
     1561 ttcatggtcg ttgatttgcc ggcgccattg cgtcccatca gcgcgaccac ttcgccgcga
     1621 ccgacctcga agctcaggtc atacaggatg cgagcagcgc cataccaggc gctcaagcgt
     1681 tcgaccgcaa gcatcgtttc gcccattgca ccgcccccgc aaaggtcttg ccggtgccga
     1741 aatacacctc gcgcacctgc gcattgtcgc ggatcgtggc cgcgtcgc
//
LOCUS       DATDHO010000145         8464 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_451417, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000145 DATDHO010000000
VERSION     DATDHO010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8464
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_451417"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(250..1425)
                     /locus_tag="VIY07_02795"
     CDS             complement(250..1425)
                     /locus_tag="VIY07_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY6380712.1"
                     /translation="MLEAAKQLLKPSKRSDVPPFIVMDVMAAAAQCEARGAQIIHMEV
                     GQPAAPAPKTAIKAAQAALAQGRLGYTECLGIPSLRRRIARHYGEMYDLGLDPARVVV
                     TTGSSGAFVLAFLALFEPGDRVALANPGYPPYRHILSALGCEPVLIETSADTRWALSA
                     KALIAAHQRAPLKGVVIASPANPTGTMIDADALSRLIAIAEAEGIRVISDEIYHGLDY
                     AFAAETAANVSDRVVVINSFSKYFCMTGWRVGWMVVPENLVRPIDRLQGNLAISVPTL
                     AQIAAEAAFEGREEMQAVKHGYEENRRILTEGLPKAGLDKFLPVDGAFYLYADISRFS
                     DDSLDFAKRMLNEAGVAATPGIDFDPVNGKHFLRFCYAGSADEMREAVARIGNWLKG"
     gene            1651..2997
                     /locus_tag="VIY07_02800"
     CDS             1651..2997
                     /locus_tag="VIY07_02800"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY6380713.1"
                     /translation="MAGGGPTLSPARAQDSATRGMPIIRDAEIEQLLRDYAQPILRAA
                     GLAKQNVRVVVLSDRSFNAFVMDGRHIFINAGALFDAKTANEVIGVFAHETGHLAGGH
                     LQRLREQLASAQTAGIVALLAGVGAAVAASRAGGAAGDVGMAAILAPQAAIMRSVLAY
                     VRTQEDQADHAGVKFLNATGQSPKGMVELFKRLGNEVLFNSRYIDPYMQTHPMPADRV
                     AALETLAKTSPYWDRKDPPELQLRHDMMRAKLSGFLERPDTVARRYPSSDHSLPARYA
                     RAISTYRHSDLRQALLQIDGLIQAQPNNPYFYELKGQALLEGGHPAEAVAPLRQAAQL
                     SHNNPLIEIMLAQSLNATNNPKFAEEAVGLLRTAIAREPEASDAYAQLAVAYGRKGDL
                     ANADLASAQAAFARGDLKTARQLATRAKTRLPIGSPAWVRADDIVNVKPKTNANVQ"
     gene            3012..3779
                     /locus_tag="VIY07_02805"
     CDS             3012..3779
                     /locus_tag="VIY07_02805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEY6380714.1"
                     /translation="MTFRLRLTAAACVALLAVALPQGSRAELSASQRGEVERIIREYL
                     IAHPEVIQDAMAELERRQSAADAEKHKAAIKQYSQAIFNSPRQVVLGNPDGNVTFVEF
                     FDYNCGYCKRAMDDMLALMKDDPKLKVVLKEFPVLGPASLEAAQVAVAVRMQDKTGKK
                     YLEFHQKLLTGRGQVDKARALAVAKDIGLDMVRLEKDLASPEIKATLQESFKLAEALG
                     LSGTPSYVIGDNVVVGAVGLEALREKVNTSRCGKPTC"
     gene            3888..5018
                     /locus_tag="VIY07_02810"
     CDS             3888..5018
                     /locus_tag="VIY07_02810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0042398 - cellular modified amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylate-amine ligase"
                     /protein_id="HEY6380715.1"
                     /translation="MYAFGMEEEYFLFDAKTRHAVRRVDKKFLLLTQKRLGDRVMTEM
                     LQSQLEVATPPCETFDEARAYLAHYRRELAEMAARHRLGIAAMGTFPLAYWPEQTVTP
                     KSRYGAIIDDLQMIGYRNMLCGMHVHVAVPDVETRINLIMRLTPYLPLLLALTTSSPF
                     WQGNLTGLVGYRLAAYDELPRTGLPELFRTNDDYREFVAALKWAKVIPDESYIWWAIR
                     PSLRNPTIELRVADSCTRLDDALAVAALFRCLVRALDRDRALNAGFDRVGRAITQENK
                     WHAQRYGIRATFIEPFSRSPLTLVQWLDQVIDFIAEDIDAFDCANEIRHLHSIATNGT
                     SAERQIEIFSQALGAGRRRLTALKQVIDWVAGETQAPDHTRS"
     gene            5121..5579
                     /gene="aroQ"
                     /locus_tag="VIY07_02815"
     CDS             5121..5579
                     /gene="aroQ"
                     /locus_tag="VIY07_02815"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HEY6380716.1"
                     /translation="MAKTTIYVLNGPNMNLLGTREPEKYGRSTLADVEKLCAETAKRF
                     GLDIVFRQSNREGELIDWIQEAHAKDAGAIIINPAGYTTTSIAIMDALLAVKLPAVEV
                     HITNIHTRESFRHNSYISKAAKAVIAGFGVDGYTLAITGLAGLLGAKQKG"
     gene            5635..6099
                     /gene="accB"
                     /locus_tag="VIY07_02820"
     CDS             5635..6099
                     /gene="accB"
                     /locus_tag="VIY07_02820"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEY6380717.1"
                     /translation="MGKSPKTSIVDRELIQELTKLLDETGLTEIEIEQDGKRVRVARA
                     ATAAAPPSTAVRVEVAPQPGTEAAVKPIDPSKHPGVVISPMVGTAYAAPEPGGRPFID
                     VGSKVKTGDTLLIVEAMKTMNQIPAPRGGTVIQILFEDGQPVEFGEPLVIIE"
     gene            6203..7555
                     /gene="accC"
                     /locus_tag="VIY07_02825"
     CDS             6203..7555
                     /gene="accC"
                     /locus_tag="VIY07_02825"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEY6380718.1"
                     /translation="MFDKILIANRGEIALRVLRACKELGIPTVAVHSTADADAMHVRF
                     ADESVCIGPPAAKDSYMNVPSILSACEITGADAVHPGYGFLSENARFAEILAEHGVQF
                     IGPKAEHIRLMGDKIEAKRTAKKLGIPVVPGSEGAVSSDQEAARIAGAIGYPVLIKAA
                     AGGGGRGMKVASSASELSAALSTARAEAKAAFGDDALYIEKYLERPRHIEIQVLGDGE
                     GNAIHLGERDCSLQRRHQKVWEEGPSPALNAGARDAIGETVAKAMREIGYLGVGTVEF
                     LYEDGKFYFIEMNTRIQVEHPVTEMITDIDLIFEQIRVAAGSNLAIQQQDVKFHGHAI
                     ECRINAENPVSFRPSPGKIMHYHPPGGLGVRIDSAVYQGYSIPPYYDSLVGKLIVHGK
                     TRTECLMRLKRALDEVVVDGIETTLPLFRALVRENDIIDGNYHIHWLEQFLAHGGMES
                     "
     gene            7615..8289
                     /gene="aat"
                     /locus_tag="VIY07_02830"
     CDS             7615..8289
                     /gene="aat"
                     /locus_tag="VIY07_02830"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEY6380719.1"
                     /translation="MANRESTFIEITPEVLLKAYACGIFPMAESADDPALYWIEPDMR
                     GIIPLEGFHVPARLARTVRATSWTIHVDRDFDAVIEGCAEPKPDRARTWINTRIRRIY
                     RALFERGHCHTVEVYDGETLVGGLYGVSLGRAFFGESMFHRARDASKVALVHLIARLK
                     SGGYRLLDTQYVTEHLRTFGAVEVPKRRYHRLLEEALTGDADFEALPRDPLGGDGVLK
                     IIDGLR"
BASE COUNT         1710 a         2628 c         2546 g         1580 t
ORIGIN      
        1 ttgcgaggaa cgccgtttcg acaatcgcag cggcaggatc gtttcctcga actatgtcga
       61 ctgcgaagcc cggctggccg acgaacggga cacgacgccg tcagagaaca tgagtgccga
      121 acggatgcgc gcgatcctgg gcgctttcag gcgataggac gccccccatc gttcgtcccc
      181 ccggaagcgg ggacccagat cttttatctt gcgctgggtt cccgctttcg cggaacgagc
      241 ggtcctgcgt caccccttca gccaattgcc gatccgcgcc accgcctcgc gcatctcgtc
      301 tgccgagcct gcgtagcaga aacgcaaaaa atgtttaccg ttcacgggat cgaagtcgat
      361 gccgggcgtc gccgccactc ccgcttcatt caacatgcgc ttggcgaagt cgaggctgtc
      421 atcggaaaat cgggaaatat cggcgtaaag atagaatgcg ccgtcgacgg gcaaaaattt
      481 atcgaggcca gctttcggca atccttcggt caggatacga cggttctcct cgtaaccgtg
      541 cttgaccgct tgcatctctt cgcgcccctc gaatgcggcc tctgcggcga tctgcgcgag
      601 cgtcggcacc gaaatcgcaa ggttgccctg cagacgatcg atgggacgga caagattttc
      661 agggacaacc atccagccga cgcgccatcc tgtcatacag aaatatttcg agaacgagtt
      721 tatcaccacg acacggtcgg agacattcgc ggctgtttcg gccgcaaaag cgtaatcgag
      781 gccgtgatag atctcatcgg aaataacccg gatgccttcg gcttcggcga tcgctatcag
      841 ccggctcaat gcatcggcat caatcatggt gccggtcgga ttggcggggc tggcgatcac
      901 aacgcctttc agcggggcgc gctgatgcgc ggcgatcaag gctttggcgg acagcgccca
      961 acgcgtatcc gccgatgttt caatcaggac cggctcgcaa ccaagggcgg acaggatgtg
     1021 ccggtacggg ggatagcccg ggttggccaa cgccacgcgg tcacccggct cgaacaacgc
     1081 caggaaggcg aggacaaagg cgccggaaga tccggtggta accacgacac gcgcgggatc
     1141 caggccaaga tcgtacattt cgccatagtg acgggcgatg cgcctccgca acgacggaat
     1201 gccgaggcat tcggtatagc caaggcggcc ttgggcgagc gcagcctgcg cggccttgat
     1261 tgctgtcttc ggagcaggcg ctgcaggctg ccccacttcc atgtggatga tttgggcgcc
     1321 ccgcgcctcg cattgcgccg ccgcagccat tacgtccatg acgatgaacg gcggcacgtc
     1381 gctgcgtttg gacggcttca atagctgttt tgcagcctca agcatcagtt ccgtccatgg
     1441 cagccgccct gccccgctgt tgccgtattc cgcggattgc ttgcattttc atgacccagt
     1501 cgtgatcgtc agtcgcgttg accaccctaa agcacgccac taggttcacg cccaatctgg
     1561 cagaaaatcg ggatgacctt gaacggcaca cctatcagga cgcggcgcgc ggcgccagcg
     1621 atcgcgatcc tcacggcggt cgcagtcgcg atggcgggag gcgggcctac gctttcgccc
     1681 gcgcgcgcac aggatagcgc cacgcgcggc atgccgatca tccgcgatgc cgagatcgag
     1741 cagctcttgc gtgactacgc ccagcctatc ctgcgcgcgg cgggtcttgc caagcagaac
     1801 gtgcgagtcg tcgttctaag cgaccgttct ttcaatgcgt tcgtcatgga cggccggcac
     1861 atcttcatca atgcgggtgc gctgttcgat gccaagacgg cgaacgaagt cattggcgta
     1921 ttcgcgcacg agacggggca cctcgccggc ggccacctgc agcgtttgag agagcaactg
     1981 gcatcggcgc aaacggctgg aatcgttgcc ttgctggccg gggtcggcgc cgccgtcgca
     2041 gcatcgcgcg cgggaggtgc cgctggcgac gttggcatgg ccgcgatcct cgcaccccaa
     2101 gcagccatca tgcgttcggt gctggcctat gtgcgtacgc aggaagacca ggccgatcac
     2161 gccggcgtga aattccttaa tgccaccggc cagtcgccga aaggaatggt cgagctgttc
     2221 aagcgcctgg gcaatgaagt gttgttcaat tcccgctata tcgacccata catgcaaacg
     2281 cacccgatgc cggccgatcg tgttgccgcc cttgagacgc ttgccaagac aagcccttat
     2341 tgggaccgca aggatccgcc cgaacttcag ctgcgccacg acatgatgcg cgcgaagttg
     2401 tcgggctttc tggaacggcc ggacacggtc gcccgccgct atccgtcctc cgatcacagc
     2461 ctgccggcgc gctatgcccg cgcgatttcg acctatcgtc actccgacct gcgtcaggcc
     2521 ctgttgcaga ttgacggcct gatccaagcg caaccgaaca acccctattt ctacgagctc
     2581 aagggccagg ccctgctcga aggcggccat ccggctgaag cggtcgcgcc actgcggcaa
     2641 gccgcgcagc tttcacataa caacccgctg atcgaaatca tgctcgcgca gtcgctcaat
     2701 gccacaaaca atccaaagtt tgccgaggaa gcggtcggat tgctgcgcac ggccatcgcg
     2761 cgcgaacccg aggcgtccga tgcttacgcg cagcttgcag tcgcctatgg ccgcaagggc
     2821 gatcttgcaa acgccgacct tgcttcggca caggccgctt ttgcccgcgg cgatctcaag
     2881 actgcccgcc agctggcgac gcgtgccaag acgcgcctgc cgatcggttc gccggcctgg
     2941 gtgcgggctg atgacattgt gaacgtgaag ccgaaaacca atgccaacgt tcaatgaaca
     3001 ggaaggattc catgacattt agactgcgcc tgaccgccgc cgcctgcgtg gccttgctgg
     3061 ccgttgccct gccgcaaggt tcgcgtgcag aactctccgc gagtcagcgc ggtgaagtcg
     3121 aacgcatcat ccgggaatat ctgatcgcgc accctgaggt cattcaggac gccatggccg
     3181 aactcgagcg acggcagagt gcagcggatg ccgaaaagca caaggcagcg atcaagcagt
     3241 actcgcaggc gatattcaat tcgccgcgcc aggtcgtcct cggcaacccg gacggcaacg
     3301 tcacctttgt ggagtttttc gattacaact gcgggtactg caagcgcgcc atggatgaca
     3361 tgcttgcgct gatgaaagac gatccgaaac tcaaggtcgt cctcaaggaa ttcccggttc
     3421 tcggtccagc ctctctcgag gctgcccagg ttgctgtagc ggtccgcatg caggacaaga
     3481 cgggcaaaaa atatctcgaa tttcaccaga agctgcttac cgggcgcggc caggtcgaca
     3541 aggcgcgcgc gctcgcggtt gcgaaggaca tcggtctcga catggtccgg ctcgaaaaag
     3601 atctggcgag tcctgaaata aaggcgacgc tgcaggagag cttcaagctt gccgaggcgc
     3661 tcggtctcag cggcacccca agttatgtga tcggcgataa tgtcgtggtg ggcgcggttg
     3721 gcctcgaagc gctgcgagaa aaggtgaata cctcccgctg cggcaagccg acctgctgac
     3781 gactcagtag ctttagtttc aacatacaat tggcggccgc gggtgcggca gcttttgcgt
     3841 caacaatcgg cggaacaaaa gttccatcgg ggcggttgta gcgcggcatg tacgcgtttg
     3901 gcatggaaga ggaatacttt ctgttcgacg cgaagacgcg ccatgcggtg cgccgcgtcg
     3961 acaagaaatt ccttttgctg acccagaagc ggcttggcga ccgcgtgatg acagaaatgc
     4021 tgcagtcgca gctggaggtc gcaacgccgc cgtgcgagac cttcgacgag gcacgcgctt
     4081 atctcgcgca ttaccggcgc gagctggccg agatggccgc ccggcacagg cttggcatcg
     4141 cggctatggg cacctttcct ctcgcctact ggccggaaca gaccgtaacg ccaaagtcgc
     4201 gttatggcgc catcatcgac gacctgcaga tgatcggtta ccgcaacatg ctctgcggca
     4261 tgcacgttca cgtcgcggtg ccggatgtcg aaacgcgcat caacctgatc atgcgcctga
     4321 cgccctattt gccgctcctg ctcgcgctca cgacctcctc gccgttctgg caaggcaatc
     4381 tcaccggtct cgtcggttat cggctcgcgg cctacgacga attgccgcgc acgggtcttc
     4441 ccgaactgtt tcgcaccaac gatgactatc gcgagttcgt cgccgcgctg aagtgggcga
     4501 aagttattcc ggatgaaagc tacatctggt gggcgattcg cccctccctc aggaatccga
     4561 cgatcgagtt gcgggtcgcc gacagctgca cccggctcga cgacgcgctg gcagtcgcgg
     4621 ccttgtttcg ctgcctcgtg cgcgcgctcg atcgcgaccg cgcgctcaat gccggcttcg
     4681 accgcgtcgg ccgcgccatc acgcaggaga acaagtggca tgctcagcgc tacggcattc
     4741 gcgccacttt catcgagccg ttctcgcgat cgcccctcac gctcgtgcaa tggctggatc
     4801 aggtcatcga ttttattgcc gaagacatcg atgcgttcga ctgcgcgaac gaaatcaggc
     4861 accttcattc tatcgccacc aacggcacca gcgcggaacg tcagatagag atcttcagcc
     4921 aggcactggg cgcaggccgc agaaggttaa cggcgctcaa gcaggtcata gattgggtcg
     4981 ctggcgagac ccaggcaccc gatcacacac gatcttgatt ccaaattcca agtggccttc
     5041 cgggcttccc cttatgctcc gggccaccta taaagcgctg cggcttcata attcttcgag
     5101 ctgggcgcgg gcgggactca atggcaaaga caacaattta cgtcctcaat ggaccaaata
     5161 tgaacctgct cggcacccgc gagcccgaaa aatatggacg ctcgactctc gccgacgtgg
     5221 aaaagctctg cgctgaaacc gcgaaacgat tcgggctcga catcgtgttc cggcagtcaa
     5281 accgcgaggg tgagctcatc gactggatcc aggaggcgca tgcgaaggac gcaggcgcca
     5341 tcattatcaa cccggcaggc tacaccacca cgtccatcgc catcatggac gcgctcctcg
     5401 ccgtgaaatt gccggcggtc gaagtgcaca tcaccaatat ccacacgcgc gagagtttcc
     5461 ggcacaattc atacatttcg aaagcagcca aggcagtgat cgccggcttc ggcgtcgacg
     5521 gttatacatt ggcaatcacc ggtctcgccg gcctgctcgg cgccaagcaa aaaggttgag
     5581 cgccgaaaat gatgccaaac gtttacgcaa tgatccgcgc ctgatgggca tgcaatgggg
     5641 aagtcgccca agaccagcat cgtcgatcgt gagctgatcc aggagctaac caagctgctg
     5701 gacgaaaccg ggctgaccga aatcgaaatc gagcaagacg gcaaacgcgt gcgcgtcgcg
     5761 cgcgcggcaa ccgccgctgc gcccccttcc acggcggtgc gggttgaggt cgcgccgcaa
     5821 ccgggaacgg aggctgccgt caagccgatc gatccctcga aacaccccgg ggtggtgata
     5881 tcgccaatgg tcggaacggc gtatgcggcg cccgaaccgg gcggcaggcc gttcatcgat
     5941 gtcggcagca aggtcaagac cggcgatacg ctgttgatcg tggaagcgat gaaaaccatg
     6001 aaccagattc ccgctccgcg aggcggtacg gtgattcaaa ttctgttcga ggacggtcag
     6061 ccggtcgagt tcggcgagcc gctggtgatc atcgagtgag agcgaatagc gaatggtgag
     6121 tagcaaacag tgagtaaaac aatacgctcc ttccctattc gctattcgct actttctatt
     6181 cgcctctgtc cgggcgaaaa gcatgttcga taaaatcctg atcgccaatc gcggtgagat
     6241 cgcactgcgt gttctgcgcg cctgcaagga gctcggcata ccgactgtag ccgtgcattc
     6301 caccgccgac gcagatgcga tgcacgtgcg ctttgccgac gagagcgtgt gcatcgggcc
     6361 tcccgcagcc aaggacagct atatgaacgt tccgtcgata ttgtcggcat gcgaaattac
     6421 cggcgcggat gcggtgcatc ccggctacgg gttcctgtcc gagaatgcgc gttttgccga
     6481 aatcctcgcc gagcatggcg tgcagttcat tggccccaag gccgagcaca ttcgcctgat
     6541 gggcgacaaa atcgaggcca aacgcacggc caaaaaactg ggcattccgg tcgtgcccgg
     6601 gtcggaaggc gctgtcagct ccgaccagga ggccgcgaga atagccggcg ccatcggcta
     6661 tccggttctc atcaaggccg cagcaggcgg cggcggccgc ggcatgaagg ttgcctccag
     6721 cgcgagcgag ctttccgccg cgctctccac tgcacgtgcc gaggcgaagg ccgcctttgg
     6781 tgacgacgcc ctctatatcg agaaatatct cgaacggccg cggcacatcg aaattcaggt
     6841 gcttggcgac ggcgaaggca acgccattca cctcggcgag cgcgattgct cccttcagcg
     6901 ccgtcaccag aaagtgtggg aggaagggcc ctcgcccgcg ctcaacgcgg gcgcgcgcga
     6961 cgcgatcggc gagacggttg ccaaagcgat gcgtgagatc ggttatctgg gcgtcggcac
     7021 cgttgagttt ctgtacgagg acggcaagtt ctatttcatc gaaatgaaca cgcgcatcca
     7081 ggtcgagcat ccggtgaccg agatgatcac cgacattgat ctgatcttcg agcagattcg
     7141 cgtcgcggcc ggcagcaatc tcgcaatcca gcagcaggat gttaaattcc acggccacgc
     7201 gattgagtgc cgcatcaacg ctgaaaatcc cgtttcattt cgcccatcgc ccggcaagat
     7261 catgcactac catccgccgg gcggcctcgg cgtgcgcatc gattccgccg tctaccaggg
     7321 ctacagcatt ccgccctact acgattcact tgtcggcaag ctgatcgtgc acggcaagac
     7381 gcgcaccgaa tgtctcatgc ggctcaagcg cgcgctcgac gaggttgtgg tcgatggcat
     7441 tgagacaacg ctgcccctct ttcgggcgtt ggtccgcgaa aacgacatta tcgacggcaa
     7501 ttaccatatt cactggctcg agcagttcct cgcccatggc ggaatggaga gctaggacac
     7561 gatttcagaa atttgctgca attttggcgc gtagatagtg ccagggtccg catcatggca
     7621 aaccgcgaaa gcacctttat cgagatcacg ccggaagtgc tgctcaaggc ttatgcgtgc
     7681 ggcatttttc ccatggcaga aagcgccgac gatccggccc tctactggat cgagccggac
     7741 atgcgcggaa ttatcccgct cgaaggattt catgtgccgg cgcggctcgc ccgcaccgtg
     7801 cgcgcgactt cgtggaccat ccatgtcgat cgagatttcg acgcggtgat cgaagggtgc
     7861 gccgagccga aacccgatcg cgctcgcacc tggatcaaca cgcgcattcg gcgcatttat
     7921 cgcgcgctgt tcgagcgcgg acattgtcat acagtggaag tatacgacgg tgagactctc
     7981 gtgggcggac tctatggcgt ctcgctcggc cgcgctttct ttggcgagag catgtttcac
     8041 cgcgcccgcg atgcttccaa agtcgcgctg gtccatctca tcgcacgcct caagagcggc
     8101 gggtaccgcc tgctcgacac gcaatatgtg acggaacatc taagaacctt cggcgcggtc
     8161 gaagtcccga agcgacgcta ccaccgcctg ctggaagagg cgttgaccgg cgacgccgat
     8221 ttcgaggcgc tgccccgcga tccgcttggc ggcgacgggg tgttgaagat tattgacggc
     8281 ttgcgataac gccgctcagt gcagtgccat gggtccccgc tttcacgggg acgagcggaa
     8341 agggactcta gcgcggcggc gggaaaaacc ctggtggcgg cggcatgcgt tgcggcgggg
     8401 gggccggctg ctgggtacgc cgctgctgct gcggctgctg ctgttgctgc cgtgccggcg
     8461 gcct
//
LOCUS       DATDHO010000146         5240 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_353262, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000146 DATDHO010000000
VERSION     DATDHO010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5240
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_353262"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..245)
                     /locus_tag="VIY07_02835"
     CDS             complement(<1..245)
                     /locus_tag="VIY07_02835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380720.1"
                     /translation="MLQTRTFAVAAAAVVIFQINAAAARDLIKMTIGQRGNWDTSITH
                     LGDKAGIFDKHGLQLEMIYTSGSGETLQPVIAGGVDLG"
     gene            complement(268..1062)
                     /locus_tag="VIY07_02840"
     CDS             complement(268..1062)
                     /locus_tag="VIY07_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007770172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6380721.1"
                     /translation="MAETGRLRQAAVAAPLISQVTLLRVAIILGVLAGWEFLAHSGWL
                     YRDVVPSLLSIGRALIKLLSDRNYYFHLGVTAAEIGAALAIGGSAGLAVGLLLGGNRF
                     LSKAFEPYLYYLGPTPKIIFFPVMIMWFGVGPESKVALGTLSCFFPVALNVAAGMRQI
                     DKVLIRVGHSFRASTWQMVQKIYLPAMRHPIINGVRLGFGFALIGTLLAETKLSNKGI
                     GFLIIQTYSVFDMPGMYAMLIVLFVLAIGANALIGRLGGLENIKRN"
     gene            complement(1041..1823)
                     /locus_tag="VIY07_02845"
     CDS             complement(1041..1823)
                     /locus_tag="VIY07_02845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6380722.1"
                     /translation="MTMATSTPAVSRRDYSAPLVGLGSFIACLLFVEGLIRFGLLNRF
                     IVPPPSEIVMSFGRLFAEENIVHRFFFTAGECLLAGVMVTICGISIGVVMQRFDLLRR
                     ACETWVAAFASAPLVLTYPLFMVIFGRNAWTIIMMGFLAALPPVILKTIEGISGTRKV
                     LVNVGRSFNLTPAQQFWKILFPAALPTIFVGIRLGLIFALINIVGTEFLINFGGLGQL
                     INDLAERYDLSGTYAAICFVILVSVVFFIALEKAERWLRPVD"
     gene            complement(1820..2659)
                     /locus_tag="VIY07_02850"
     CDS             complement(1820..2659)
                     /locus_tag="VIY07_02850"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380723.1"
                     /translation="MASSAGSSDAILVADDIAVRFETPEGPITAVDNVSFQVRPGEFL
                     SVIGPSGCGKSTLFNVIGGLLNTHDGVVTVAGETISGPHKSIGMVFQEESTFPWRTVT
                     DNVAFPLELVGMPKQKRVERARHFISLVGLDGFENRYPGELSGGMRQRVSLARTLASE
                     PKILLMDEPFAALDEQTRLLLGDKVLQIQQQLKQTTLLITHNITEAVQMSDRILVMTY
                     RPGKVKRIVDIALPRPRTSEIVGSEVFGRYVAEIWNDLREEANRGMRDEEKSALRREE
                     QAS"
     gene            complement(2667..4397)
                     /locus_tag="VIY07_02855"
     CDS             complement(2667..4397)
                     /locus_tag="VIY07_02855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007689035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY6380724.1"
                     /translation="MNAAGFGSDVVADALRATDIPYIALNPGASYRGLHDSLVNYLGN
                     EQPQMLLCLHEESAVAIAHGYAKVTGRAMAAAVHSNVGLMHATMAIFNAWCDRMPIVI
                     LGATGPVDAVIRRPWIDWIHTARDQGALIRGYTKWDDQPASPIAAREAVLRANWIANT
                     APRGPTYVNLDAGMQESKLGEPVEPIDARRFMPPVDSVAPPAPIKRAADLLREAKHPL
                     ILAGRVSRDLDAWNTRIALAERLGARVATDLKVAAAFPTDHRLHVGSPSTIGIAAQAT
                     DAIREADAILSLDWVDLAGTLKSVLGRGMPSARIIQISVDHHLHNGWSMDYQGLPPVD
                     VFIDCEPDIAVPALMTALGAGKPHAVTPVNKEFPKLEDGKLTVDHLADGLRRSVGRRP
                     TTLTHVSLSWNGASWPFRHPLDYLGSDGGGGVGGGPGISVGAALALMGTGRLPVAVCG
                     DGDFLMGVTALWTAAHYRIPLLIVVANNRSFFNDELHQERMARMRNRPVENRWIGQRI
                     SDPDIDLAGMARAQGAQGFGPVTAAADLEPAFEKAIAAVEAGAVAVVDVRVEPGYTAA
                     MTAVMTRKSE"
     gene            complement(4541..>5240)
                     /locus_tag="VIY07_02860"
     CDS             complement(4541..>5240)
                     /locus_tag="VIY07_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEY6380725.1"
                     /translation="WAQPSEMIGSWAGAMGHTQWMPEVWLHVGVDYDRDGRASPFGKP
                     DDSLAGTARYLVERGKYRRGEAWGCEVTLPPERTRLADNRTTRSYAKWQDLGVRRADG
                     AAFARPGDQVKLWLPVSGGPAFLVGQNFRAVHSYNPSTSYTLALCHLGDLIRGDPPFR
                     QQFPGGERAPTFEEVKEIQRRLNDQGFKTDGIDGRTGSDTIKAILAYQKKVGMDPADG
                     YAGLKVLARLRQGP"
BASE COUNT         1057 a         1606 c         1626 g          951 t
ORIGIN      
        1 cccagatcaa cgccgccggc gatgacgggc tgcaaggttt cgccgctgcc tgacgtgtag
       61 atcatctcga gctgcaggcc gtgtttgtcg aaaatgccgg ccttgtcgcc gagatgggtg
      121 atcgacgtgt cccaattgcc ccgttggcca atagtcatct taatgaggtc gcgagccgcg
      181 gcggcattga tctgaaaaat cacgacggct gccgccgcaa cggcaaatgt ccgggtctgt
      241 agcatgcgcc tcgctcctcc ctgagttcta atttcttttg atgttttcaa gtccgccgag
      301 tcgtccgatc aatgcattgg cgccaatcgc cagaacaaac aacacgataa gcatcgcata
      361 catgcctggc atgtcgaaaa cgctgtaggt ctgaatgatc aggaagccaa tgcccttgtt
      421 cgaaagcttg gtttcggcaa gcagggtgcc gatcagggca aaaccgaaac ccagacgcac
      481 gccgttgatg atcggatggc gcatggcggg caggtagatc ttctggacca tttgccaggt
      541 gctggcgcgg aagctgtggc cgacgcggat gagcacctta tcgatctgcc gcatcccggc
      601 agcgacgttg agcgcaaccg gaaagaagca ggagagcgtt ccaagtgcga ctttcgattc
      661 aggcccgacg ccgaaccaca tgatcattac cgggaagaag atgatcttcg gtgtgggacc
      721 gagataatag agataaggct cgaacgcctt ggacagaaac cgattgccgc cgagcaaaag
      781 gcccactgct aggcccgcgg aacctccgat cgcgagcgcc gcgccgatct ccgcggcagt
      841 gacgccgagg tggaaataat agttgcggtc ggaaagcagc ttgatcaagg cgcgaccgat
      901 cgacaggagg gagggaacca cgtctcgata gagccagccg gaatgggcga gaaattccca
      961 ccctgccagg acgcccagga tgatggcgac gcgcaacagc gtcacctggc tgatcagtgg
     1021 ggcggcaact gccgcctgtc ttagtctacc ggtctcagcc atcgctcggc cttttccaga
     1081 gctatgaaaa atacaacact gacgaggatc acgaagcaga tcgccgcata ggtgccggag
     1141 agatcgtaac gttcggcaag gtcgttgatc agctgcccaa gtccgccgaa attgatcaga
     1201 aattcagtgc cgacaatgtt gataagcgcg aagatcaatc caaggcgaat gccgacaaag
     1261 atcgtcggca gtgccgcggg aaacaggatt ttccagaact gttgcgcagg cgtcaggttg
     1321 aagctgcgcc cgacattcac gaggaccttg cgcgtgccgg aaattccctc gattgttttg
     1381 aggatgaccg gcgggagcgc cgccaagaaa cccatcataa tgatggtcca ggcgttgcgg
     1441 ccgaagatca ccatgaacag cggataggtc agcaccagcg gcgccgatgc aaacgccgcc
     1501 acccatgttt cgcaggcgcg ccgcagcaga tcaaagcgct gcatgacgac gccgatgctg
     1561 atgccacata tcgtgaccat cacgcctgcg aggaggcact cgccggctgt gaaaaagaac
     1621 cggtggacaa tgttctcctc ggcaaacagg cggccaaaac tcatgacgat ttcggaggga
     1681 ggcggcacga taaaacggtt gagcaatccg aaacggataa ggccttcgac gaacagcaaa
     1741 caggcaataa acgagccgag gcccaccaga ggggcggaat aatctcggcg cgagacggcg
     1801 ggtgtcgatg tcgccatcgt catgatgcct gttcctcccg acgcagcgca cttttctcct
     1861 cgtcgcgcat gcctcgattt gcttcctcgc ggaggtcgtt ccagatctcc gcgacgtacc
     1921 gcccgaagac ttcactaccc acaatttccg acgtccgcgg gcgcggcagg gcaatatcga
     1981 caatgcgctt caccttgccg ggtcggtagg tcatcaccaa aatgcggtcg gacatctgga
     2041 ccgcctcggt gatgttatgc gtgatcagca gcgtcgtctg cttgagctgc tgctggatct
     2101 gcagaacctt gtctccaagg agcagtcgcg tctgctcgtc aagtgcggca aacggttcgt
     2161 ccatcagcag gattttaggc tccgaggcga gtgtgcgcgc tagagaaacc cgctggcgca
     2221 tgccgccgga aagctcgccc ggatagcggt tttcgaagcc atcgaggccg acaagcgaaa
     2281 tgaaatggcg agcacgctcg acgcgcttct gtttcggcat gccgacgagc tcgagcggaa
     2341 acgccacgtt gtcggtaacc gtgcgccagg gaaatgtcga ctcctcctga aagaccatgc
     2401 cgatcgactt gtgcggaccg gaaattgttt cgccggcgac agtgacaaca ccgtcatgag
     2461 tgttcagcag gccgccgatc acattgaaca gtgtcgactt gccgcatccg gacggtccga
     2521 tgaccgacag gaactcgcca ggccgcacct gaaaggaaac gttgtcgacg gccgtgatcg
     2581 gaccctccgg cgtttcgaag cgcaccgcga tatcgtccgc aacaagaatg gcgtcgcttg
     2641 atcctgcgct ggatgccatt acgcacttac tcgctctttc gagtcatcac ggccgtcatg
     2701 gcggcggtgt atccgggttc gacccgcacg tcgacgaccg cgacagcacc cgcctcgacc
     2761 gctgcaatcg ccttctcgaa cgcaggctcg aggtctgcgg ccgcagtcac cggtccgaaa
     2821 ccttgcgcac cttgcgcccg cgccatcccg gcaagatcga tgtcggggtc ggaaatgcgc
     2881 tggccgatcc aacggttctc taccggccga ttgcgcatgc gggccatacg ctcctggtgc
     2941 agctcatcgt tgaagaagga acgattgttg gcgacgacga tcaacaacgg gatgcggtaa
     3001 tgcgccgcgg tccaaagtgc cgtaacgccc atcaggaagt cgccgtcgcc gcaaaccgcg
     3061 acaggcagcc gccctgtgcc cattagcgca agcgcggctc cgaccgatat gccgggtccg
     3121 ccgccgacgc cgccgccgcc atccgagccg aggtaatcga ggggatggcg aaacggccag
     3181 ctcgccccgt tccacgagag cgacacatgg gtgagggtcg ttggccgcct gccgaccgaa
     3241 cgacgcaagc catcggccag gtgatcgacc gtgagcttgc cgtcctcgag cttcggaaat
     3301 tccttgttca ccggcgtaac cgcatgcggc ttgcccgctc cgagcgcggt catcagcgcg
     3361 ggcaccgcga tatcgggttc gcagtcaatg aatacgtcca ccggcggaag gccctgatag
     3421 tccatgctcc aaccgttgtg cagatggtga tcgaccgaaa tctggatgat gcgcgcggaa
     3481 ggcatgccgc ggccgagtac cgatttcagg gttccggcaa gatcgaccca atcgagactc
     3541 aaaatggcgt cagcctcgcg tatcgcatcg gtcgcctgcg cagcgatgcc gatcgtgctg
     3601 ggcgagccga cgtgcagccg atgatcggtt ggaaacgctg cggcgacctt aaggtcagta
     3661 gcaacccgcg cgccgagccg ctcggcgagc gcgatgcgcg tgttccaggc atcgagatca
     3721 cgcgatacgc ggccggcaag gatcagcgga tgctttgcct ctcgcaacag atcggcggcg
     3781 cgcttgatgg gagccggagg ggcgacgctg tccaccggcg gcatgaatcg cctggcgtcg
     3841 atcggttcaa ccggctcgcc gagcttgctt tcctgcattc cggcatcgag gttgacgtaa
     3901 gtcggtcctc gcggcgcggt gttggcgatc cagtttgcgc gcagcaccgc ttcgcgcgcc
     3961 gcgatcggag aggccggctg atcgtcccac ttggtgtagc cgcgtatcag ggcgccctgg
     4021 tctcgcgcgg tatgaatcca gtcgatccat ggccgccgta taacggcatc gaccggtccc
     4081 gtggcgccaa ggatgacaat cggcatgcga tcgcaccagg cgttgaagat cgccatggtc
     4141 gcgtgcataa gcccgacgtt cgaatgcacg gcggccgcca tcgccctgcc ggtcaccttg
     4201 gcatagccgt gggcgatcgc caccgcgctt tcctcatgca ggcacaacaa catctgcggc
     4261 tgttcgttgc ccagatagtt gaccaggctg tcgtgcagcc cgcggtagct cgcgcctgga
     4321 ttgagcgcga tgtaagggat gtcggttgcg cgcagcgcat ccgcgacgac atcgctgccg
     4381 aagccggcag cgttcacgcc ggccggaacc gggcgatcga gcgcagacaa tggctcgtta
     4441 cccgcagggc gcgccttcgc gctatcgttt ctgttgctgg ccaatatgag ggctccgccg
     4501 tcgtccgccc ggcgggcgga tgggccggca tccaaccgga ttacgggccc tgacgcaatc
     4561 gggcgagaac tttcaggccg gcgtagccat cggcggggtc catgccgacc tttttctgat
     4621 aggcgagaat ggctttgata gtgtcgcttc cggtgcgccc gtctatgccg tcggtcttga
     4681 agccctgatc gttgagccgg cgctggatct cttttacttc ctcgaatgtc ggcgctcgtt
     4741 ccccgcctgg aaactgctgg cggaatggcg ggtcgccacg aatgaggtct ccaagatggc
     4801 agagcgcgag cgtgtagctg gtggaaggat tgtacgaatg caccgcgcgg aagttctgtc
     4861 ccaccagaaa ggccgggccg ccggagaccg gcagccacaa tttcacctgg tcgccgggac
     4921 gggcgaaagc tgcgccgtcg gcacggcgca cgccgaggtc ttgccacttg gcgtatgagc
     4981 gtgtcgttcg attgtcggcc agccgtgttc gctccggcgg cagggtgact tcacagcccc
     5041 aggcttcgcc gcgacggtat tttccgcgct cgacgagata ccgcgctgtg ccggcaagcg
     5101 aatcgtctgg cttgccgaac ggcgatgcgc ggccgtcgcg gtcataatcg acacccacgt
     5161 gcagccacac ctcgggcatc cactgcgtgt gccccattgc gccggcccag gagccgatca
     5221 tttcggacgg ttgcgcccag
//
LOCUS       DATDHO010000147         2619 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_254609, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000147 DATDHO010000000
VERSION     DATDHO010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254609"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2619
                     /locus_tag="VIY07_02865"
     CDS             <1..>2619
                     /locus_tag="VIY07_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HEY6380726.1"
                     /translation="YAEVVAREGLSMLGWREVPTDNSTLGESVKPTEPKHMQVFIGRG
                     KKKFSENEFERRLYILRKSISNAIYRRRERRTSGYYPVSISCRTVIYKGMFLADQLGT
                     YYPDLHDPDFESALALVHQRFSTNTFPTWSLAHPYRYIAHNGEINTLRGNVNWMAARQ
                     TSVSSPLFGKDINKLWPISYEGQSDTACFDNALEFLVQGGYSLAHAMMMMIPEAWAGN
                     PLMDEERRAFYEYNAALMEPWDGPAAIAFTNGKQIGATLDRNGLRPARYLLTSDDRIV
                     MASEMGVLPIPEKDIVKKWRLQPGKMLLVDLDQGRLIPDEELKATLAKSHPYKEWLER
                     TQIVLEELPGTHNEAPISNLALLDRQQAFGYTQEDLKFLMTPMATTGEEAVGSMGNDT
                     PISALSDKPKSLFTYFKQNFAQVTNPPIDPIREELVMSLVSIIGPRPNIFDLEGTSKT
                     KRLEVRQPILTNQDLEKIRAISEIGSDHFKSSTFDITFPAEHGADGMGWALDELCDRS
                     EEEVRNGSNIIILSDRKAGADRIPIPALLACAAVHHHLIRNGLRTSVGMVLETGEPRE
                     VHHFACLAGYGAEAINPYLAFETLIAMKDDLPQKLEDKEIIKRYIKSIDKGLLKVMSK
                     MGISTYQSYCGAQIFDAVGLRQEFVDKYFTGTHTRIEGVGLAEIAEESVRRHRDAFSD
                     APIYRNMLDVGGDYAVRVRGEDHVWNAETVSRLQHAVRGNSQDHYRAFAQIVNEQSER
                     LLTIRGMFRLKTAEEDGRKPVPLEEVEPAKNIVRRFSTGAMSFGSISREAHTTLAIAM
                     NRIGGKSNTGEGGEESDRFKPLPNGDSMRSAIKQVASGRFGVTAEYLVNSDVMQIKMA
                     QGAKPGEGGQLPGHKVD"
BASE COUNT          575 a          783 c          777 g          484 t
ORIGIN      
        1 tatgccgagg tggtcgcgcg cgaggggctt tcgatgctcg gctggcgcga ggtaccgacc
       61 gacaattcaa cgctcggtga atcggtcaag ccaaccgagc ccaagcacat gcaggtgttc
      121 atcggccgcg gcaagaagaa gttctccgag aatgagttcg aacgccgact gtacatcctg
      181 cgcaagtcga tctccaacgc gatctatcgc cgccgcgaac ggcgcacgtc gggctattac
      241 ccggtgtcga tctcctgtcg cacggtaatc tacaagggta tgtttctggc ggatcagctc
      301 ggcacctact accccgatct gcacgatccg gatttcgaga gcgcgctcgc actggtgcac
      361 cagcgcttct cgaccaatac ttttccgacc tggtcgctgg cgcatccgta ccgctacatc
      421 gcacacaatg gcgagatcaa cacgctgcgc ggcaacgtca actggatggc ggcgcgacag
      481 acatcggttt cctcgccatt gttcggcaag gacatcaaca agctttggcc gatctcctat
      541 gaaggccagt ccgacaccgc ctgcttcgac aacgcgctcg agtttctggt gcaaggcggc
      601 tactcgcttg cgcatgccat gatgatgatg attcctgaag catgggctgg caacccgctc
      661 atggacgagg agcggcgggc tttttacgaa tacaacgcgg cgctgatgga gccttgggac
      721 ggcccggcgg cgattgcttt cacgaacggg aagcagatcg gagccacgct tgaccgcaac
      781 gggctgcgac cggcgcgcta tctgctcacc agcgacgatc gcatcgtcat ggcatcggaa
      841 atgggcgtcc tgccgattcc ggaaaaggac atcgtcaaga aatggcgcct gcagcccggc
      901 aaaatgctgc tcgtcgacct cgaccaggga agacttattc cagacgagga attgaaagcc
      961 acactggcga aaagtcatcc ttacaaggag tggctcgaac gcacgcagat cgtcctcgag
     1021 gaattgcccg gaacgcacaa tgaggcgccg atctcgaatc tggcgttgct cgatcgtcag
     1081 caggctttcg gctacacgca ggaagatctg aaattcctga tgacgcccat ggcaacgacc
     1141 ggcgaggaag cggtcggctc aatgggcaac gacacgccga tttcggccct gtccgacaag
     1201 ccgaaatcgc tgttcacgta tttcaagcag aacttcgcgc aggtcaccaa tccgccgatc
     1261 gatccgatcc gggaagagct cgtcatgagc cttgtctcga ttatcggacc gcgacccaac
     1321 atcttcgatc tcgagggcac atcaaaaacg aagcgccttg aggtgcgtca gccgattctc
     1381 accaaccagg atctcgagaa gattcgtgcg atttccgaga tcggcagcga tcatttcaag
     1441 tccagcacct tcgacatcac ttttcctgcc gagcacggcg cagacggcat ggggtgggca
     1501 ctcgacgaat tgtgcgatcg gtccgaggag gaagttcgca acggttccaa catcatcatc
     1561 ctgtcggatc gcaaagcggg cgccgatcgc attcccattc cggcgctgct cgcatgcgcg
     1621 gccgtccatc atcatctgat tcgcaacgga ttgcgcacgt ccgtcggcat ggtgctcgaa
     1681 accggcgaac cgcgcgaggt gcaccacttc gcctgtctcg ccggctatgg cgcggaagcg
     1741 atcaatccgt acctcgcctt cgagacactg atcgcgatga aggatgatct gcctcagaag
     1801 ctcgaggata aggagatcat caagcggtac atcaagtcga tcgacaaagg tctgctgaag
     1861 gtgatgtcca agatgggcat atccacctac cagtcctatt gcggagcgca gatcttcgat
     1921 gccgtcggcc tgcggcaaga attcgtcgac aagtacttta ccgggacaca tacgcgcatc
     1981 gagggcgtcg gcctggcgga aatcgcggaa gaatcggtgc ggcgtcaccg ggacgcattc
     2041 agcgatgcac cgatctaccg aaacatgctg gatgtcggcg gcgattacgc ggtgcgcgta
     2101 cgcggcgaag atcacgtatg gaacgccgag acagtatcgc gcttgcagca tgcggtgcgc
     2161 gggaattcac aggatcatta tcgcgccttc gctcagatcg tgaacgagca gagcgagcgc
     2221 ctgctgacaa tccgcggcat gttccggctg aagactgcag aggaagatgg ccgcaagccc
     2281 gtgccgctcg aggaagtcga gcctgccaag aatatcgtgc ggcgtttctc gaccggcgcg
     2341 atgtcgttcg gctccatctc tcgcgaggct cacacgacgc tggccatcgc gatgaaccgc
     2401 attggcggca aatcgaacac cggcgagggc ggcgaggagt cagaccgctt caagccgctg
     2461 ccgaacggcg attcgatgcg ctcggcgatc aagcaggtgg catcaggccg cttcggcgtg
     2521 accgccgagt acctcgtcaa ctctgacgtg atgcagatca agatggctca gggcgcgaag
     2581 cccggagaag gcggccagct gcccggtcat aaggtcgat
//
LOCUS       DATDHO010000148         7947 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_6756, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000148 DATDHO010000000
VERSION     DATDHO010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7947
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_6756"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..465
                     /locus_tag="VIY07_02870"
     CDS             <1..465
                     /locus_tag="VIY07_02870"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY6380727.1"
                     /translation="IVVTKASNIRSFADMVGKKIAVASGTTNEQAIIAQLKQQKIEAT
                     LISVKDGTEAVAMLESGNADGYASDKLLLVGARLNNPQALVMLPDDLSVEPYGIVLPR
                     GDWAFRLAVNTGLAEIYRDGRILGVFKAWFDRIGLQMSPVLRIMYGLGALSD"
     gene            1276..2943
                     /locus_tag="VIY07_02875"
     CDS             1276..2943
                     /locus_tag="VIY07_02875"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     tetratricopeptide repeat protein"
                     /protein_id="HEY6380728.1"
                     /translation="MQYFGALETDEAASQARAGPAFRFADFEIDVARQELRRAGDLIP
                     VEPQVFDLLVHLIRNRNRIVTREELIDAVWKGRVISEATLSSRVSAVRRVIGDNGTDQ
                     ALIRTHHKRGFRFVGRVDDAMRMREVPVANSVQQKFVSEENQEQSAVAPRPTLALPDK
                     PSIAVLPFQNRSGDSVQEYFADGLTEDIITGLSRQRWFFVIARNSSFAFKADASDVRK
                     VASELGVRYVLEGSVRRASGRVRVTAQLIDASKGVNLWADRYDRDLANIFELQDEITN
                     RVIDSVGSQIIVAEAARVQRKSPQNIEAWDLVMQALPHMWRMTVDEQRLAQDLLQQAV
                     GLDADYAHAHALLGWTHLCMFNLNTRMPIGEFTEKALACGWRALALDEQDHWGHLVVG
                     LGYTRRRRPDPAVMHLSKALELNPNFALGYAGLGYAYACGGQPERGLESLEQAQRLSP
                     CDPFLAIYAPVARYMALFGMKKYEETIAVCRAYAALHPHHAGAWRLMTTSLGLLGKID
                     EAKEALARTLTLQPDLSSAHVANNTVFANPDDRARFLLGLQKAGLRD"
     gene            complement(2956..4530)
                     /locus_tag="VIY07_02880"
     CDS             complement(2956..4530)
                     /locus_tag="VIY07_02880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     tetratricopeptide repeat protein"
                     /protein_id="HEY6380729.1"
                     /translation="MQFLFGDHMLDDERRELRCGAETIAVEPQVFDLLIYLIRNRDRV
                     VSKDDLIDAIWGGRAVSDSTLTSRINAARKAVGDSGHDQKLIRTVARKGLRFVGDVQI
                     QPFGLGPHPDGTRSQPELHDSFAALPLPDRPAIAVLPFVNMSGEPEQDYFSDGMSEDI
                     ITALSKLRWFFVIARNSSFTYKGKAVHLKQIAEELGVRYVVEGSVRKDGGRVRITAQL
                     NDVTTGSHVWAERYDRDIADVFAVQDEITEAIVAAIEPQLYAAENFRAQRKPPDSMDA
                     WDLVMRGLSYYWRVTRQDNVVAQALLEKAIAIDPNYGQALGVLAASHTFGAHMGWADM
                     ATAVPIAERAALAAIRADSEDPWAHHALGNVYLFRRRFDDSLAEFELALRLNPNFSLA
                     QAYYGLTLSYCGRWKEADLAARRALRLSPRDPFSALFYGIASYAQFSGHNYDEAMRLA
                     RESIRQRSDFVGGHRVLTAAAGMAGREDVASAVLKELRRAQPNISMAWLANQMPFQHD
                     ADRKHYLEGFRRAGLE"
     gene            4672..5529
                     /locus_tag="VIY07_02885"
     CDS             4672..5529
                     /locus_tag="VIY07_02885"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY6380730.1"
                     /translation="MPAATLTALKPEKQEASGSPDLVAIKARQQAAWSSGDYAVVGTT
                     LQIVGEELCEALDLRSGRKVLDVAAGNGMVSLAAARRWCDVTSTDYVASLLERGRARA
                     SAEGLNIDFKVADAEDLPFADASFDTVISTFGVMFTPNQERAAGEMMRVCKSGGQIGL
                     ANWTPDGFIGQLFKTLGKYLPPPPTAKSPMLWGTRARLNELFGSAATWIKTEPRIFNF
                     RYRSDQHFVEVFKTYYGPVLKAFSALDVPQRTRLEKDLYDLIARMNKAEDGTMVVPSE
                     YLEIVLMKR"
     gene            5814..6057
                     /locus_tag="VIY07_02890"
                     /pseudo
     CDS             5814..6057
                     /locus_tag="VIY07_02890"
                     /inference="COORDINATES: protein motif:HMM:NF025392.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
     gene            complement(6366..6566)
                     /locus_tag="VIY07_02895"
     CDS             complement(6366..6566)
                     /locus_tag="VIY07_02895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380731.1"
                     /translation="MRAKECRILAERLHAQLAREVMLKAASDYERMAREAEQQEIAQG
                     LSRLRAVASDLYLARLSADHPD"
     gene            6592..6879
                     /locus_tag="VIY07_02900"
     CDS             6592..6879
                     /locus_tag="VIY07_02900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380732.1"
                     /translation="MIDGGINRRSLSSRFGFPKPNREEIQWPRGGGKMAVSTDGDNFS
                     VFSVAPVFFFVFVGQLLKRFGHVQKPGFVQGVLHALGKANAFRGVSTEIDN"
BASE COUNT         1627 a         2264 c         2376 g         1680 t
ORIGIN      
        1 atcgttgtta cgaaggcgtc caacatccgt tcatttgccg acatggtggg caaaaaaatc
       61 gccgtcgcga gcggtaccac caatgaacaa gccatcattg cacagttgaa gcagcaaaaa
      121 atcgaggcga cgctcatttc ggtaaaagac ggcactgagg ccgtcgcgat gctcgaaagc
      181 ggcaatgccg atggctacgc cagcgacaag cttctgctgg tcggcgctcg cctgaacaat
      241 ccgcaagcgc tcgtgatgtt gcccgacgac ttgtccgtcg aaccttatgg aatcgtattg
      301 ccgcgcggcg attgggcatt caggctggca gtcaacaccg gcctggcgga aatctaccgc
      361 gacgggcgca tcctgggtgt gttcaaggcc tggtttgatc gaataggtct gcagatgagc
      421 ccggtgctga ggatcatgta cggactgggc gccctgtccg attgatcccg ccaagcggat
      481 ccgaatccgg tggctcggca atttcgcgcg gcgaaaattt caggttcatg ggaatcatta
      541 ttattattct ttcgcattcc gaaacaggaa gactgcaagc cagaagcccc tgcggccggg
      601 aaggtacgat ctgaccatct cttggggtgg gcacgtcgtt gctcaaggcg tttttcaggt
      661 cggcctgagc cgagtaggaa tacatggcgc gccagcgcga caattaaggc cgctgcggcc
      721 atggcagcca aaaggagctt caatttgcgg gcaatcaatt ccgacctcgt ccgattctct
      781 tgcgagcgca gctatgcgag tcgggagagc tagttgtatt tgggcggaaa ggcttgaagg
      841 agaatgtcgg ccgagcatga ttttttgtgg agatcgtatg tagatcaatt atgcattgcg
      901 tttcttactc cggcgtacgt ccacgttttg ctgctcttaa ttccataacg ttttcgtgaa
      961 gagtgagcca aaggcgtgac ttcacctcaa attagaggca tagcagcgcc acgcacgggg
     1021 cgcccacaag gggcggtctc gcactgcggt ccgaccacat tcacagcggg agaatcagcc
     1081 gatcgcgcgc gtggccaatt gctgattagt ccgcctcgat tcgtccacca tcaattcgtg
     1141 aagcaggacg tcatggcctc tgtgaggccc atcacagtcg aggagatttt tgtgcgctac
     1201 aaaacgaaca ggatcagaaa ggtgacctgc cgaagaacac tttgaacatg cgatagcgcg
     1261 tcagggggcg aggctatgca gtactttgga gcattggaaa cggacgaagc cgcctcacaa
     1321 gcgagggcgg gcccggcgtt tcgtttcgcc gattttgaaa tcgatgttgc gcgtcaggag
     1381 ttacgacgag cgggcgatct gatcccggtc gagccccagg tttttgattt gcttgttcat
     1441 ctcattcgca accgcaatcg aattgtcacc agggaagagt tgatagacgc cgtatggaag
     1501 ggtcgcgtca tctcggaggc gacgctgagt tcccgcgtga gcgccgtccg ccgagtgatc
     1561 ggggacaacg gcactgacca ggcgcttatt cgcacgcacc acaagcgtgg cttccgtttt
     1621 gtgggccgcg tggacgatgc aatgcgaatg cgcgaagtgc ctgtcgccaa ttccgtgcag
     1681 caaaagttcg tgagtgagga gaaccaggag caaagcgccg ttgcgcctcg gccaacgctc
     1741 gccttgcccg ataagccatc gattgcggtg ttgccatttc aaaatcgaag cggcgattct
     1801 gtacaggaat acttcgccga cggcctgacc gaggacatca tcaccggtct gtcgcgccag
     1861 cggtggttct ttgtcatcgc ccgcaattcg agctttgcgt tcaaggccga tgcctccgat
     1921 gttcgtaaag tcgccagtga actcggcgtg cgctatgtgc tcgagggcag cgttcgcaga
     1981 gcgagcggtc gggtgcgcgt gaccgcgcaa ctgatcgacg ccagcaaggg cgttaattta
     2041 tgggcagatc gctacgatcg cgatttggcc aacattttcg agttgcagga cgagattaca
     2101 aaccgggtca tagactcggt cggctcgcag atcatcgtgg ccgaagcggc tcgcgtccag
     2161 cgcaagtcgc cgcagaatat cgaggcatgg gatctggtca tgcaggcgct gccgcacatg
     2221 tggcggatga cggtcgacga acagcgcctg gctcaggacc tgttgcagca ggctgtcggg
     2281 cttgatgcgg attatgctca tgcgcatgcg ctgcttggat ggacgcacct atgcatgttc
     2341 aacctcaaca cacgaatgcc gatcggtgaa tttaccgaga aagctctcgc ctgcgggtgg
     2401 cgcgcgttag cgctcgacga gcaggatcat tggggccacc tcgtggtggg acttggctac
     2461 acgcgccggc ggcgtcccga tccggccgtg atgcatcttt ccaaggcgct tgaattgaat
     2521 ccgaactttg ccctcggtta tgcggggctg ggatatgctt atgcctgcgg cgggcagcct
     2581 gagcgcgggc tcgaatcgct ggagcaggct cagcggctca gcccctgcga tccgtttctg
     2641 gcgatatatg cgccggtggc tcgctacatg gctctcttcg gtatgaaaaa gtacgaggaa
     2701 acaattgctg tatgtcgcgc ctacgcggcg ctacacccgc atcatgccgg cgcctggcga
     2761 ttgatgacca cctcgcttgg cttgctcgga aaaatcgacg aagccaagga agctcttgcg
     2821 cgcacgctta cgcttcagcc tgacctgtcc agcgctcatg tcgcgaacaa tacggtgttc
     2881 gcgaatcctg atgatcgggc tcgattcctg ctggggctgc agaaggcggg cttgagggac
     2941 tagcgtcaga ggccgttatt caaggcctgc gcggcggaag ccttcgagat aatgctttcg
     3001 gtcggcgtca tgctggaatg gcatctggtt tgcgagccac gccatcgaga tattcggctg
     3061 cgcgcgccgc aactccttca gtactgcaga agcgacatcc tcccttccag ccatgcccgc
     3121 tgccgccgtc aacactctat ggccgccgac gaaatcgctg cgctggcgga tggattccct
     3181 cgcgagccgc atggcctcat catagttatg tccactgaac tgcgcatatg aggcgatgcc
     3241 atagaacagc gctgaaaacg ggtcgcgcgg gctgaggcgc agggctcggc gtgcggcgag
     3301 atcggcctcc ttccagcgtc cgcagtagga caatgtcagg ccatagtatg cctgcgccag
     3361 cgagaagttc ggattaagcc gcaatgcgag ttcgaactcg gccagcgagt cgtcaaatcg
     3421 tcgcctgaac aggtagacgt tacccagcgc atgatgcgcc caagggtctt cgctgtccgc
     3481 tcttatggcg gcaagcgccg ctcgctcggc tatcgggact gcggtcgcca tatccgccca
     3541 gcccatgtga gcgccgaaag tgtgactggc ggcgagtacg ccgagcgcct ggccgtagtt
     3601 ggggtcgatg gcgatcgctt tttccagcag ggcctgcgcg accacgttat cctgtcgcgt
     3661 gacccgccaa taatacgaca gcccccgcat cacgagatcc cacgcatcca tgctgtcggg
     3721 cggcttgcgt tgcgcgcgga aattctccgc cgcataaagc tgcggttcga tcgcggcgac
     3781 aatcgcttcg gtgatctcat cctgcaccgc gaacacgtcg gcgatgtcgc gatcatatcg
     3841 ctcggcccag acgtggctgc ccgtcgtcac atcattcagc tgcgccgtga tgcgcacgcg
     3901 gcctccgtcc ttgcgaacgc tgccttcaac tacatagcgg acgccaagct cttccgcgat
     3961 ctgcttcaag tggacggcct tgcccttgta ggtgaatgat gagttgcggg cgatcacgaa
     4021 aaaccagcgc agcttggaaa gcgcggttat gatgtcctcg ctcatgccgt cggaaaaata
     4081 atcctgctcc ggctcgccgc tcatgttcac aaaagggagc actgcaatgg caggacgatc
     4141 gggcagaggc aaagcagcga agctgtcgtg gagttcgggt tgggaccggg tcccgtcggg
     4201 atgtggtcca agcccgaagg gctgtatttg cacgtcgccg acaaagcgaa gtccttttcg
     4261 agcgacggtg cgaatcaatt tctgatcgtg accgctgtcg cccaccgcct tgcgcgcggc
     4321 attgatgcgg ctggtcaggg tcgaatccga caccgcccgg ccgccccaga ttgcatcaat
     4381 gagatcgtcc ttactgacaa cgcgatcgcg gtttcggatc aggtaaatga gcaggtcgaa
     4441 gacctgcggc tcgacggcaa tcgtctctgc gccacagcgt aactcgcggc gctcgtcgtc
     4501 aagcatatga tcgccaaaga gaaattgcac ttcgctggcc cgtgccggaa cctcggtctc
     4561 aggaaataat caagcccgcc tcaaggacaa atcaagcttt gggcaaagtc ttttgggccc
     4621 ggcaagcgta ctcaaatttc aatcacattg gaaactcgag aggagatttc gatgccagcc
     4681 gcaacattga ctgcattaaa gcccgaaaag caggaggcga gcggatcgcc ggatctcgtg
     4741 gccataaagg cccggcaaca agctgcatgg tcctccgggg actacgccgt cgtaggcaca
     4801 accctgcaaa ttgtgggcga agagctttgc gaggctctcg accttcggtc gggcagaaag
     4861 gtgcttgatg tcgccgccgg caatggaatg gtcagccttg ctgccgcgcg gcgatggtgt
     4921 gatgtcacgt caacggatta tgtggcgagc ttgctggagc gcggtcgcgc ccgcgcatcg
     4981 gccgaaggcc tgaatatcga cttcaaggtg gccgatgccg aggacctgcc gttcgcggac
     5041 gcttctttcg ataccgtcat ctcgaccttc ggggtcatgt tcactccaaa ccaggaacgt
     5101 gccgccggcg agatgatgcg ggtctgcaaa tcaggcggtc aaatcggtct cgccaactgg
     5161 acgcctgacg gattcatcgg gcagctcttc aaaacgcttg gcaaatatct gccgccgcct
     5221 ccaactgcca agtctccaat gctgtggggt acgcgcgcgc ggctgaatga actgttcggc
     5281 tccgcggcga cctggatcaa gaccgagccg cgaatcttca atttccgcta tcgctcggat
     5341 caacatttcg tcgaggtctt caagacctac tacggtcctg tgctcaaggc gttctctgct
     5401 ctcgatgtgc ctcagcggac acgcctggag aaggatttgt acgacctcat cgcgcgcatg
     5461 aacaaagccg aggacggcac catggtcgtg cccagcgagt acctggaaat tgtcctgatg
     5521 aagcggtgag gctccccctc caacgccgag atgggtgcca aggcattttc aaagctcagt
     5581 gttcaagaag gaagagatcc gatggatgca gtgacgttcg ggggtgttcg cacccccacc
     5641 actcctgctg tggaaattaa gccccgcgcg tccttcttcg ctcgtttcgt ggacgcgctg
     5701 aaggaatcgc gacgcctgga ggctcgccgg ttctttgaaa ggcacgcgga cctattgccg
     5761 ccagatcaat cctgaagcgt aagctatatg aggacccaac catgaaacgc tacatgatcg
     5821 aacgcgagat ccctggcgtc ggaaggctcg accgcgcgca acttaggaag attgccgcca
     5881 agtcaaacgg cgtgcttgcc gggctttccg gaaaagtaca gtggctcgac tcgttcgtcg
     5941 cggcaggaca agacattctg cgtctatctg gcggaaagcg aggacctggt ttttgagcac
     6001 gcacgggtgg gcggctttcc ggtgacgaag cttacggaaa ttccccaccg tcattagtcc
     6061 catgacggca tattcggatt gatcatggcg aacgaggcga acgtgagtga aaccctgtgg
     6121 gataatccgt ggttttttgc agccgataaa gccgccgtcg ggccgtcact gcgctgtccg
     6181 atcaccggct atccctgcga aggcgatctt tcccatcttt gcaaggacta tggatgcgcc
     6241 cgaaagggcg gcttgtcgcc acgttcggat gaaaactagt ttctccagag cttgagatcg
     6301 ccgcggagat ccgcgtacca cgccaagtgc cacgccgcat tgcgcgatgg cgacttgatc
     6361 caaattcaat ccggatggtc cgcgctcaag cgggctaggt acaggtcgct ggcaaccgct
     6421 cgtaggcgcg agaggccttg tgcaatttcc tgttgttcgg cttcgcgcgc catgcgctca
     6481 taatccgaag ccgctttcag cataacctcg cgtgcgagct gggcgtggag tctttctgcg
     6541 aggatgcggc actccttggc gcgcatgcgg catcttcggc tttccgggac cgtgatcgat
     6601 ggcggcataa atcgcagaag cctttcctcg cgattcggat tccccaagcc gaatcgagaa
     6661 gaaattcaat ggccgcgcgg cggcggaaaa atggcagtct cgacggatgg ggacaacttc
     6721 tcagtcttca gcgtcgcgcc ggtctttttc ttcgtttttg tcggccagct cttgaaacgt
     6781 ttcggccatg tccagaagcc gggctttgtc caaggggtcc tccacgcgct gggcaaggcg
     6841 aacgcattcc gcggcgtatc gacggaaatc gacaactgag aatggaggca cgaaaactcc
     6901 cgacactgtg cattaaattc gagcaatggt attttgttcc tcaatatatc tttcccgcat
     6961 tatcgaagaa acgaagtcca ccaacgaacc tggcaaaggc aaactttgcc gcgttgtcat
     7021 tgcactttgc gtgttctcgc cgaatgcatt gcttggcgct caaggttcag ttctgtttgc
     7081 aatcggtcca gtagctgttg caaagcgatt gtgagtctct cggtttgatc agcaggcgcc
     7141 agaggcggag gaagaacact ttttccgacc tcggcaccgg aagggagcgg gaccacggtg
     7201 ccggcagtgg ccggtttcat agccacgaca ggtgcccaat cggggcgctc gaaagttctg
     7261 gcagcacgct tgcgtcgtcg ccgttccaga tagtgaagta ttgatccggc aggggccagg
     7321 aacacaaaca tgaacgtgag cagggctatt gtgtgatcgt cggcttgccc tgccggctcc
     7381 tgagtcgtca aacgaggttg ggtcagcagt tcgtcagagc ccttcgacga aacgtcactt
     7441 ccaccaccac gggcatcagc gacttgcggc tcggtatcgc ttgcaacggt cgattgcgtc
     7501 ggttcgacag gcgcttccgc cgccggctgg gaagcgggcg gcgaatcggc aaattttgtc
     7561 acatcgagcc aaccggtaga gggcgcagtt ccggctgcac caacagctga cgcatccgcg
     7621 ctcgcgatcg ccatgcccat cgttgcagga cgctgcgtag gcggaggcgg ttccggttgg
     7681 actgccgctt gggatttatt ttttcgtatt tgcgactcgc tcctctggat acgaagtcct
     7741 tccggtccca ggcgccagca ttgccggtta ttgttcgcac ggtcgatgcg gtagtaccaa
     7801 tgctgccctt tcggggccgc cgcattcggc ttgctgagac actcgtcaac agcgagtgca
     7861 ttgcttggcg ccaatacaat tcccaaaaaa gttagcattg atttgagttc tggcatgcct
     7921 gctctccccg atgttgtgca aagcacg
//
LOCUS       DATDHO010000149         1738 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_304202, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000149 DATDHO010000000
VERSION     DATDHO010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304202"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            24..656
                     /gene="pgsA"
                     /locus_tag="VIY07_02905"
     CDS             24..656
                     /gene="pgsA"
                     /locus_tag="VIY07_02905"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEY6380733.1"
                     /translation="MNAISSRTLPARPLALPNLLTYARIAAVPVVVALMFWQSIFDGP
                     LWLRWVALAVFISAGVTDILDGYLARTWGQQSSLGRMLDPIADKLLVASCLLMLAAEE
                     TIRGWSLLAAVVILCREILVSGLREYLAELRVGVPVTRLAKWKTTGQMVAVGFLIAGE
                     AGDRAASAIVHGAPPVVTEIGILLLWLSAILTLYTGWDYMRAGLRYMVDE"
     gene            653..910
                     /gene="moaD"
                     /locus_tag="VIY07_02910"
     CDS             653..910
                     /gene="moaD"
                     /locus_tag="VIY07_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HEY6380734.1"
                     /translation="MSVTLRYFAWVRERIGKPEEVIEAPPEIKTVGELMAWLASRGEE
                     YAHAFETPHVIRAAIDHRHVRADAAIKDAREIAFFPPMTGG"
     gene            934..1425
                     /locus_tag="VIY07_02915"
     CDS             934..1425
                     /locus_tag="VIY07_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEY6380735.1"
                     /translation="MTAMNGTVRLQREPFDAAAEAAALTHGRTDIGAVVTFTGICRAL
                     EDGQPIAALTLEHYPGMAEAEIERHVSEAGQRWPLLGVTVIHRYGRIVPGEDIVLVVT
                     ASSHREAAFAAAEFLMDYLKTRAPFWKQVEKAGNKTWIDAKTTDDAAAERWMATRIRQ
                     AVE"
     gene            1452..>1738
                     /locus_tag="VIY07_02920"
     CDS             1452..>1738
                     /locus_tag="VIY07_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase"
                     /protein_id="HEY6380736.1"
                     /translation="MVPLVVVTIAVVALGVRAAQATQVSYFDVPHGAHPHDVAPAPDG
                     TVWYTAQHQGAIGILDPKTGKVLQVSLGSGAAPHGVIVGPDRAAWITESGL"
BASE COUNT          328 a          485 c          555 g          370 t
ORIGIN      
        1 cggcatgggt gttccttctc ggcatgaacg ccattagttc tcggacgctg ccggcgcggc
       61 cgctcgcgct gccaaacctg cttacctatg cgcgcattgc cgctgttccg gtggttgtcg
      121 cattgatgtt ttggcagagc attttcgatg ggccgctgtg gctgcgatgg gtcgcgctcg
      181 cggttttcat atcggccggt gtcacagata ttctcgatgg gtatctcgcg cgcacttggg
      241 gccaacaatc ctcacttggc cgaatgcttg atccgatcgc ggacaaactg ctggtggcgt
      301 cgtgcctgct gatgttggcg gccgaagaaa ccatccgcgg ctggagcctg cttgccgcag
      361 tggtcattct gtgtcgtgaa atcctcgtat cgggtttgcg ggaatatctt gccgagctac
      421 gcgttggcgt gccggtgacc cgcctcgcaa aatggaaaac caccggacag atggttgccg
      481 ttggtttctt gattgctgga gaggcgggcg atcgtgccgc ttcggcaatc gttcatggcg
      541 cgccgccggt ggtcaccgag atcggcattc tgctgctttg gctgtccgca atcctgactc
      601 tttatacggg ttgggactac atgcgcgccg gcttgcggta catggttgat gaatgagtgt
      661 aacgctgcgt tatttcgcct gggtacgcga gcgtatcggc aaacctgaag aagtcatcga
      721 ggcgccaccc gagataaaaa ccgtcggtga actgatggca tggctcgcct cccgcggcga
      781 agagtatgcc catgcctttg aaacgcccca tgtgatccgt gccgccattg atcaccgcca
      841 tgtacgggct gacgcggcaa ttaaggatgc cagggaaatc gcgttttttc cgccaatgac
      901 aggtggatag cctgagcctc gccaccgggt taaattacgg ccatgaacgg aactgtgcgg
      961 ttgcagcgcg agccttttga cgccgcggcg gaagcggcgg cgttgacgca tgggcgtacc
     1021 gatatcgggg cagtcgtgac gttcaccgga atctgccggg ctctcgagga tggtcaaccg
     1081 atcgcagctc tgacgctcga acactatccc ggtatggcag aggccgagat cgagcgtcac
     1141 gtgagcgaag cggggcagcg gtggccattg ctcggtgtca ccgtgataca tcgatacgga
     1201 cgcatcgtac ctggcgaaga tatagtcctg gttgtgactg cgtcgtccca tcgcgaagca
     1261 gcgtttgcag cagccgaatt cctcatggac tatctgaaga cgcgcgcccc gttctggaaa
     1321 caagtcgaga aggctggcaa caagacctgg atcgatgcca aaacgactga tgatgccgcc
     1381 gctgagcgat ggatggcgac tcgcatacgt caagcggtgg agtaacccag atctgactgc
     1441 cggagagcaa catggttccg ctggtagtgg taacgatcgc ggtcgtggcg ctgggtgtcc
     1501 gggccgcgca ggcgacccaa gtgagctatt ttgatgtgcc gcatggcgcg catccgcacg
     1561 atgttgcgcc ggcgcccgac gggacggtgt ggtacacggc acaacaccaa ggcgcgatcg
     1621 gaattctcga cccaaaaacc ggcaaagtcc ttcaagtgtc gctcggatca ggcgcggcgc
     1681 cgcacggcgt gatcgttggc cctgatcgtg ccgcgtggat taccgaaagc ggtctaaa
//
LOCUS       DATDHO010000150         1625 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_106103, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000150 DATDHO010000000
VERSION     DATDHO010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106103"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /locus_tag="VIY07_02925"
     CDS             <1..812
                     /locus_tag="VIY07_02925"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY6380737.1"
                     /translation="RSDLPYWGYPVNQILTGEIESSMKHLLESVRKRVSKGNGNAAQR
                     AESWRSRYEKRKAAWKEEALTRAQQKPIDTRWVTYELAHVLPPDALVVEETITHRLSI
                     HRYLDMLKPGSFFAGCIGGLGTGTGTALGVKAAFPKRPVLCLIGDGAFNYDPGLAALG
                     VCQEHQLPIMIVLYNNYGYHSQKSGVPRFFPDGFAVKNQDFIGISINPSPDYATVARA
                     FDGYGEKVEEPGEVRAALQRGLKAIAGGQFALIDIRLAKAAETNERPDRAN"
     gene            849..>1625
                     /locus_tag="VIY07_02930"
     CDS             849..>1625
                     /locus_tag="VIY07_02930"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: protein motif:HMM:NF009395.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEY6380738.1"
                     /translation="MPHQPLENLNITAFDLMPSPEEIHARVPISDKAAEIVFDGRETI
                     KRILDRKDPRLFIVIGPCSIHDPTAGYDYAQRLKRLADEVRDTLYLVMRVYFEKPRTS
                     VGWKGFINDPRMDDSFHIEEGMEKARAFLLQINELGLPAATEALDPIAPQYLGDLVSW
                     TAIGARTSESQTHREMASGLSTPVGFKNGTDGNIEVAINAIKSALRPHSFLGINAHGR
                     SVVVRTRGNSYGHLVLRGGGGRANYDTVSISVTEKALIKAK"
BASE COUNT          357 a          504 c          450 g          314 t
ORIGIN      
        1 tgcgctcgga tcttccctat tggggctatc cggtcaatca gatcctcacg ggtgagattg
       61 aaagctcaat gaagcatctt ctcgaatctg taagaaaacg agtttccaag ggcaacggca
      121 acgcggcgca gcgcgcggag agttggcgca gccgttatga aaaacgaaaa gccgcctgga
      181 aagaggaggc gttgactcgc gcacagcaga aacccatcga tacgcgctgg gtcacctacg
      241 aacttgcaca cgtccttccg cctgatgccc tcgtagtgga agaaaccatc acgcacaggc
      301 tttcgatcca ccgctacctg gacatgctga aaccgggctc gttttttgcc ggctgcatcg
      361 gtgggctcgg taccggaaca ggcaccgctc tgggagttaa agcagccttt cccaaacgcc
      421 ccgtcctctg tctaatcggc gatggcgcgt tcaattatga tcccggactg gcggccctgg
      481 gagtttgcca ggagcatcag ttgccgatca tgatcgtgct ttacaacaac tacggctatc
      541 actcgcaaaa atccggcgtg ccgcgtttct tccccgacgg ctttgccgtg aagaaccagg
      601 acttcatcgg catctcgatt aatccgagtc cggactacgc caccgtcgcg cgcgcgttcg
      661 acggctacgg cgaaaaagtc gaagagcccg gcgaagtccg cgccgcgctc cagcgcgggc
      721 tgaaagccat cgccggcgga caattcgctc tcatcgacat tcggctggcg aaggcagcgg
      781 aaaccaacga acgaccggac agagccaatt aacgttctcc gagagagttt tagcgccgta
      841 ttacgattat gccgcatcaa cctcttgaaa acctgaacat tacggcattc gatctaatgc
      901 cctcgcccga ggagatccac gcgcgcgtgc cgatctccga caaggctgcc gaaattgtgt
      961 tcgatggacg tgagacgatc aagcgcatcc tcgatcgcaa ggatcctcgg ctcttcatcg
     1021 tgatcggtcc ctgctctatt cacgacccga ctgccggcta cgactacgcc cagcgcttga
     1081 aaaggctggc cgacgaggtg cgcgacacgc tgtatctcgt catgcgggtc tatttcgaga
     1141 agccacgcac ttccgtcggc tggaagggtt tcattaacga cccacgcatg gacgattcct
     1201 tccatatcga ggaaggcatg gagaaggcgc gcgccttcct tctgcagata aacgaattgg
     1261 ggcttcccgc cgcgacggag gcacttgatc cgatcgcccc gcaatatctg ggcgacctcg
     1321 tttcatggac ggcgatcggc gcgcgcacct cggaatccca gacccatcgg gaaatggcgt
     1381 ccggcttgtc caccccggtc ggattcaaga acggcacgga tggcaatatc gaggtggcca
     1441 ttaatgccat caagtccgcc ctgcgccccc atagttttct cggcatcaac gcgcacgggc
     1501 gctccgtggt ggtgcgcact cgaggcaact cctacggaca cctcgtgctg cgtggtggcg
     1561 gcggccgcgc caactacgac accgtaagca tctccgtgac cgaaaaggcg ctcatcaaag
     1621 ccaaa
//
LOCUS       DATDHO010000151         4079 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_106243, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000151 DATDHO010000000
VERSION     DATDHO010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4079
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106243"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1250)
                     /locus_tag="VIY07_02935"
     CDS             complement(<1..1250)
                     /locus_tag="VIY07_02935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY6380739.1"
                     /translation="MTVGNGKSKSVKFLLDGKEVEALDGETIWQVAQRLGTDIPHLCY
                     SPEPGYRADGNCRACMVEIEGERVLAASCIRKPTEGMKVKATSDRAKTARQMVFELLI
                     ADQPDRKTVAHDPQSKFWAWADRMNVGASRFPAHGKPAPDRSHPAMAVNLDACIQCNL
                     CVRACREVQVNDVIGMAGRGHGEKIVFDFDDPMGASTCVACGECVQACPTGALMPATL
                     VDDKNVRTEFPDRQVDSVCPYCGVGCQLTYHIKNDKLLYVTGKNGPANENRLCVKGRF
                     GFDYVHNPQRLTKPMIRKEGVPKVPHEFIDPMNPWTHFREATWEEALDKAADGLKKIR
                     DRDGPKALAGFGSAKCSNEEAYLFQKLVRAGFGTNNVDHCTRLCHASSVAALLEGVGS
                     GAVSATFNEVKNSDVIIVIGANPT"
     gene            complement(1268..2992)
                     /locus_tag="VIY07_02940"
     CDS             complement(1268..2992)
                     /locus_tag="VIY07_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HEY6380740.1"
                     /translation="MSATTQGAQTGQVAPRGGRRRPLRTPKGRQVDPQALVEVRALLT
                     DRPRRRDLLIEHLHLIQDHYGYISAAHLAALAAEMKMALTEVYEVATFYAHFDVVKED
                     ELPPPPVTVRVCDSLSCAMAGAERLLKELPRKLGRGVRVVRAPCMGACDRAPVCAVGH
                     VQTFNATPDSVATAAKTKQHAHAWKPGVDFSAYQNAGGYGLLKACLTEKRTRDELIKI
                     VSDAGLRGLGGAGFPTGRKWALVRAEPAPRMFAVNADEGEPGTFKDRYYLERDPHRFL
                     EGMLIAAWVVEARETYIYIRDEYPELRLMLLEKIEKVEKADLSPHTKLHLRRGAGAYI
                     CGEESAMIESIEGKRGLPRHRPPYVAQVGLFGRPTLEQNVETMFWIRDIIEKGAEWAT
                     SQGRHERKGFRSFSVSGRVKDPGVKLAPAGITMRELIDEFCGGMQDGHVFKAYLPGGP
                     SGGILPASMADIPLDFGTLEKYGCFVGSHAVVILSDKDDIKAAALNLMKFFEDESCGQ
                     CTPCRAGTEKAAKLMAKGPWDVKLLEELSTAMRDASICGLGQAAPNPLLCVIKYFPDE
                     LSKPLGSW"
     gene            3161..4054
                     /locus_tag="VIY07_02945"
     CDS             3161..4054
                     /locus_tag="VIY07_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018265616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY6380741.1"
                     /translation="MLEKLEFLLALAREKHFGRAAEVCGVTQPTLSAGIKQLEDAFGV
                     LLVNRGSRFQGFTAEGERVLDWARRIVGDARAMRQEVHALKHGLAGRLRLAAIPTALA
                     MVETLTTPFRARHPEVQFTILSRTSIEILTHLENLEIDAGLTYLDNEPLGRVTAIPLY
                     RERYRLLVAADAPLGDRQTVTWTEVAQVPLCLLTPDMQNRRIIERLLRDTGIDPHITL
                     ESDSMILLYSHVRTGRWASVMPARLAVSLGLTDVLRSIPIVEPEATHTIGLVAPAREP
                     MTTLTAALVAEARRVAPLLSD"
BASE COUNT          758 a         1305 c         1198 g          818 t
ORIGIN      
        1 tccgtggggt ttgcgccgat aacgatgatg acgtctgagt tctttacctc gttgaaggtt
       61 gccgacaccg cgcccgagcc cacgccctca agcaaggccg ccaccgagga agcatggcaa
      121 agacgtgtgc agtgatcgac gttgttggtg ccaaatccgg cgcgcacgag cttctggaat
      181 agataagctt cttcattcga gcacttggcg gagccgaagc ctgcgagcgc cttcggaccg
      241 tcgcggtcgc ggatcttctt caggccgtca gccgccttgt cgagcgcttc ttcccaggtc
      301 gcttcgcgga agtgcgtcca cggattcatc ggatcgatga actcgtgcgg caccttcggc
      361 acgccctcct tgcggatcat cggcttggtg agccgttgcg gattgtgcac gtagtcgaac
      421 ccaaaccggc ctttaacgca cagccgattc tcgttcgccg gcccgttctt cccggtaacg
      481 tacagcagct tgtcgttctt gatgtgatag gtcagttggc agccgacgcc gcaataagga
      541 catacgctgt cgacctgccg atcaggaaat tccgtgcgca cgttcttgtc gtcgaccagc
      601 gtcgctggca tcagtgcgcc ggtcggacag gcctgcacgc attcgccaca tgccacgcaa
      661 gtcgaggcgc ccatcggatc gtcgaagtcg aatacaatct tctctccgtg accgcggccg
      721 gccatgccga tcacgtcgtt gacctgcact tcccgacagg cgcggacgca aagattgcac
      781 tggatgcagg cgtccagatt gaccgccatc gccggatggc tgcggtcggg agcaggcttg
      841 ccgtgcgcgg gaaaacggct ggcgccgaca ttcatgcggt cggcccaggc ccagaatttc
      901 gattgcggat cgtgtgcgac ggtcttgcga tcaggctggt cggcgatgag gagttcgaag
      961 accatctggc gcgcggtctt ggcgcggtcg gacgtcgcct tgaccttcat gccctcggtc
     1021 ggcttgcgga tgcagctcgc cgccagcacg cgctcgcctt cgatctcgac catgcaggcg
     1081 cggcagtttc cgtcggcgcg gtagccgggc tcgggcgagt agcagagatg ggggatgtcg
     1141 gtaccgagac gctgggcgac ctgccagatc gtctcgccat cgagcgcctc gacctctttg
     1201 ccgtcgagga ggaatttcac cgatttggac ttgccgttgc ccacagtcat cttcgagcct
     1261 ttcgccgtca ccagcttccc agcggtttcg acaattcatc cggaaagtat tttatcacgc
     1321 acaacagggg atttggtgct gcctggccga gaccgcagat cgaagcatcc cgcatggcgg
     1381 tcgagagctc ttccagaagc ttcacgtccc atggaccctt ggccatcagc ttggcggctt
     1441 tctcggtccc cgcgcggcac ggcgtgcact ggccgcaact ttcatcctcg aaaaacttca
     1501 tcagattcaa cgccgcagcc tttatgtcgt ccttgtcaga aaggatcaca accgcgtggg
     1561 agcctacgaa acagccatat ttctcaaggg ttccgaaatc gagcggaata tcggccatcg
     1621 acgccggcag aatgccgccg gatgggccgc caggcagata ggctttgaag acgtgaccat
     1681 cctgcatgcc gccgcagaac tcgtcgatca gttcacgcat cgtgatgccg gcgggcgcca
     1741 gcttgacccc cgggtccttc acgcggcctg acaccgagaa actgcggaag cctttgcgct
     1801 catggcggcc ttgcgaagtc gcccactcgg cgcccttttc aataatgtcg cggatccaga
     1861 acatggtctc cacgttctgc tccagcgtcg gacggccaaa caagccgacc tgcgcaacgt
     1921 agggcggccg gtgccgcgga agcccgcgct ttccttcgat cgactcgatc atcgcggact
     1981 cttcgccaca gatgtaagcg ccagcacccc ggcgcaaatg taatttggtg tgcggagaaa
     2041 gatctgcttt ctccaccttc tcgattttct ccagcagcat cagacgaagc tctggatact
     2101 cgtcgcggat atagatgtac gtctcgcgtg cctcgacaac ccaggctgcg atcagcatgc
     2161 cttcgagaaa acgatgcggg tcgcgctcga ggtagtagcg atccttgaac gtaccgggct
     2221 cgccctcgtc ggcattcacg gcgaacattc gcggtgccgg ctccgcgcgc acgagcgccc
     2281 acttgcggcc ggttgggaag cccgcgccac cgagaccgcg cagtcccgca tcgctcacga
     2341 tcttgatcag ttcgtcacgc gtacgtttct cggtcaggca ggctttcaac aagccgtagc
     2401 cccctgcgtt ttgataagcg gagaaatcaa caccaggctt ccaggcatgc gcgtgttgtt
     2461 tcgttttcgc cgccgtggcc accgaatcgg gcgttgcatt gaatgtttga acgtggccca
     2521 cggcgcacac cggcgcgcga tcgcaggcac ccatgcatgg cgcgcgcacc acgcgaacac
     2581 cgcgtccgag tttgcgcgga agctccttca gcaaccgctc ggcaccggcc atcgcgcagg
     2641 acagtgaatc gcaaacgcgc accgtcaccg gcggcggcgg caattcgtct tccttcacga
     2701 catcgaaatg cgcatagaag gtcgcgacct catacacttc cgtcagcgcc atcttcatct
     2761 cggcggcgag cgcggcaagg tgcgcagcgg aaatataacc gtaatgatcc tggatcagat
     2821 ggagatgctc gatcaggaga tcgcgccggc gtggccggtc ggtgagaagc gcgcgcactt
     2881 ccaccagtgc ctgcggatcg acctgacggc ccttcggggt tcgcagcggg cggcgacggc
     2941 caccccgggg agcaacctga cccgtctgtg ccccttgagt tgtggcgctc atctctgaat
     3001 tcttcctccc tcgacagaaa cgcgtctgaa tcgaggtatg caagcccccg agtcaaatca
     3061 ggtgatagaa attatctatt aatatcccga cgctggttgt attttccgat catgcggctt
     3121 aggtggcctc agtgcaataa cctccgatcg aggcccagta ttgctcgaga aacttgaatt
     3181 tctgctggct ctggcccgtg agaagcactt tggacgggct gccgaagtct gcggcgtgac
     3241 gcagccgacc ttgtcggccg ggatcaagca gctggaggat gccttcgggg tcctcctggt
     3301 caatcgcggg tcccgattcc agggctttac cgcagaaggc gagcgcgtgc tcgactgggc
     3361 gcggcgcatc gtcggcgacg cccgcgccat gcgccaggag gtgcacgccc tcaagcacgg
     3421 cctcgcgggg aggttgcggt tagcagcaat tcccaccgcc ttggccatgg ttgagacact
     3481 gaccacgccg tttcgcgcgc gtcatcccga ggtgcagttc acaatcctgt cgcgtacctc
     3541 gatcgagatc ctcacgcatc tggaaaatct cgaaatcgat gccggcctga cctacctcga
     3601 caacgaacca ctcggccgtg tgacggcgat cccgctctat cgggagcgat accgattgct
     3661 ggttgccgcc gatgcgcccc ttggtgatcg acagacggtc acatggaccg aagtcgccca
     3721 ggttcctcta tgcctcctga caccggatat gcagaaccgc cgcatcatcg aacggctcct
     3781 gcgcgacact ggtatcgacc cacatataac gctcgaatcg gactcgatga ttcttcttta
     3841 ctcgcacgtg cgcaccgggc gttgggccag cgtcatgccc gcacgactcg ccgtttcgct
     3901 cgggcttacg gacgtcttgc gttcgattcc gatcgtggag ccagaagcga cgcacaccat
     3961 aggacttgtg gcgcccgcac gcgagccaat gacgactttg accgccgcac tcgtcgcaga
     4021 agccaggcgg gtcgctcccc tcttgtccga ttgagttaga tcagctgatc tcagcgcgg
//
LOCUS       DATDHO010000152         3784 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_55758, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000152 DATDHO010000000
VERSION     DATDHO010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3784
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55758"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(480..962)
                     /locus_tag="VIY07_02950"
     CDS             complement(480..962)
                     /locus_tag="VIY07_02950"
                     /inference="COORDINATES: protein motif:HMM:NF024835.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY6380742.1"
                     /translation="MTILQGARREGHAREVPQPAFSNGPWGEAIRYWLKERKWLQADL
                     AKETGIRANTISRVSRGFHTTTSILERIAKAFNVPLDDVLLSPDRKLTNDHRRRLAVD
                     IAEDVLRRMETRKAAAPLNEVLHDAVTSTDRYARRLQTAALTKKRKEALSKKNRRRSS
                     "
     gene            1101..1328
                     /locus_tag="VIY07_02955"
     CDS             1101..1328
                     /locus_tag="VIY07_02955"
                     /inference="COORDINATES: protein motif:HMM:NF013540.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY6380743.1"
                     /translation="MTRPAKPGRNTPLKLAIVASGKTQRDIAALAQLGEVRLSAIITG
                     RIVPSAEEKRAIARALRRPQGDLFGNEPAVA"
     gene            1328..1624
                     /locus_tag="VIY07_02960"
     CDS             1328..1624
                     /locus_tag="VIY07_02960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380744.1"
                     /translation="MAETTYLTDGRRYLTTPQAAHYVGFEPTPGVPPRHDRAIRSFWE
                     WARRKGIHACRGREGMWERSDLDDAMHRTTTPDRVSTIANLARADVQRFAKGRR"
     gene            1621..1905
                     /locus_tag="VIY07_02965"
     CDS             1621..1905
                     /locus_tag="VIY07_02965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380745.1"
                     /translation="MTRRDDDTERITDAWRDRVGELFDLEGEVAFLPPPVQVGWMEPG
                     QVAGGFRYCLQCFSQQPTADHSPVYRTSYFATLPCVRCGRRLDSLDSLSR"
     gene            2050..2937
                     /locus_tag="VIY07_02970"
     CDS             2050..2937
                     /locus_tag="VIY07_02970"
                     /inference="COORDINATES: protein motif:HMM:NF017666.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0032775 - DNA methylation on adenine
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA N-6-adenine-methyltransferase"
                     /protein_id="HEY6380746.1"
                     /translation="MTHNLTRSRGGSVAKYDPEKGIKTIAVLEGIEKYYARAKDIKQL
                     EKAIREKLKAQAEFVVWWDTGGPGVNHGGNRRRPSSKSKIGDFEPEDWKRIVHRWRTK
                     LNDPDKFEATCEAAIARYPKILEFDTTAHVGQNTGETEWFTPADYIEAARRVLGAIDL
                     DPASTSAANKIIQATTIYTAADSGLSKDWSGRVWMNPPYAQPLIEHFAEKLSASVQAG
                     SVTAAIALVNNATETAWFRALAKVASSVCFPEGRIRFWHPKKETATPLQGQAVLYFGI
                     EVGLFQREFATFGVVWMKP"
     gene            3222..3581
                     /locus_tag="VIY07_02975"
     CDS             3222..3581
                     /locus_tag="VIY07_02975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380747.1"
                     /translation="MKSIELTVFFSEPSAGLLKAETLSLDAYRQRYADWWNQVQAKPA
                     DGIADRLVWSEYVKHDPSLQAFLAAELEQERMALHVARLERDHWRRTAEALSAKVVVR
                     TRPKTLGVIDSFDLPEE"
     gene            3586..>3784
                     /locus_tag="VIY07_02980"
     CDS             3586..>3784
                     /locus_tag="VIY07_02980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380748.1"
                     /translation="MPSANLARATKTTTVARPLKVLVPLIQADLERGDRAGMEYYADA
                     GDKLIEAKSQVAHGYWGTWLSK"
BASE COUNT          741 a         1116 c         1202 g          725 t
ORIGIN      
        1 ggctcgtgcc ggtcctcgga ttgaagccgc tgacggagac ccgccagccg gacgccgtgc
       61 gccagatatt gggggcaatc ttgtgatcac gcatgggggg agtgtgagag atgggtcatg
      121 tggccgacgc cgtccgccgc acgcgctgcg cgaagacctc ggccaacgcg acaagagctt
      181 gaaaatgata cggttcctgc tgctgcaaca attggagatt cctgacgagc ccgacgaggt
      241 caccaggcgg cgcgagcgga gccagtggat gtgcgcctgc cgtaggccga ggtgccggta
      301 cgagccgcaa gacagcccgt cgtcgtgtcg tgcgcatatt gctcaccatg cctctcccca
      361 cacatcgacg gatcgcgacg tgcggaatcg ggaggggcgg gatggaccgc attgcgcgct
      421 caccgtcgtt tattaaccgc cgtgcgtcac tgtgacgtct cacctgcgta caaaggccgc
      481 tagctacttc tcctacggtt tttcttgctg agcgcttcct tccgcttctt ggtcagcgct
      541 gccgtttgca accggcgggc atagcgatcg gtactggtga cggcgtcatg gaggacttcg
      601 ttgaggggcg cggccgcctt ccgggtttcc atgcggcgca agacatcctc ggcaatatcg
      661 acagccaggc ggcgacggtg atcattggtg agcttgcgat cgggcgagag gagcacgtca
      721 tcgagcggca cgttgaaggc cttggcgatg cgttccagga tgctggtcgt cgtgtggaag
      781 cctcggctga ctcgactgat cgtgttggcg cgaatcccgg tttctttggc gagatcggct
      841 tgcaaccact tgcgttcctt caaccagtac cggatcgctt caccccaggg cccgttggaa
      901 aacgcgggtt gtggcacttc ccgagcatgg ccctcgcgac gggctccctg caagatcgtc
      961 atgggtccga ataacttaca ggcctatcaa aaaaataaca atctctatct tgacaggtac
     1021 cgataaaaag atatgattag cgttttttcg ggatgccgtc acgataaagc cgctcttgga
     1081 tgacggcgcg gcgggggcct atgacgagac cagcgaaacc cggccggaat acccccttaa
     1141 aactcgccat cgtggccagt gggaaaacgc agcgggacat tgccgccctg gcgcaactgg
     1201 gcgaagtgcg gctcagcgcc atcatcaccg ggcgcattgt gcccagcgcc gaagaaaaac
     1261 gggccatcgc cagagccctc cgacggccgc aaggggactt gtttggcaac gaaccggcgg
     1321 tggcctgatg gcggagacga catacctcac cgacgggcgc cgctatctca cgacccctca
     1381 ggcggcgcat tacgtgggct tcgagccgac gccgggggtg ccgccgcggc acgaccgcgc
     1441 gatccggtcg ttttgggagt gggcgcggcg caaaggcatt cacgcctgcc gtggccgcga
     1501 gggcatgtgg gaacggagcg acctggacga cgccatgcac cggacgacca caccggatcg
     1561 cgtctcgacg attgccaacc tggcccgcgc cgatgtccag cgatttgcga agggtcgccg
     1621 atgacccgcc gcgacgacga caccgagcgc atcaccgacg cctggcgcga ccgcgtcggc
     1681 gagctgttcg acctcgaggg cgaggtggcc ttcctgccgc cgccggtgca ggtcgggtgg
     1741 atggaaccgg gccaggttgc cggcggtttt cgctactgtc tccagtgctt ttcccagcaa
     1801 cccacggccg atcacagtcc ggtctatcga acatcctatt tcgcaacgct cccgtgtgtg
     1861 cgctgcgggc gtcggctcga ttccctcgat tcccttagtc gttgaacgct gttggagaac
     1921 gggcatgcag ctgattggat ggctcatcgc gtctgtgcgg cgctggcagt ggcagcactg
     1981 gcggccgccg ctcgggcgcg tcagtgaagg ttggctctcc gagcagtggc ggcgcgaggg
     2041 gtcgcaggtg tgacacataa cctgacacgc agtcgcggcg gttcggtcgc gaagtatgac
     2101 ccggagaagg gcatcaagac gatcgccgtg ctcgagggca tcgagaagta ttacgcgcgg
     2161 gcgaaggata taaagcagct tgagaaagcg attcgggaaa aactaaaggc gcaagcggaa
     2221 ttcgttgttt ggtgggatac gggcgggcct ggcgtcaacc atggtggcaa ccgccgccgc
     2281 cctagttcaa agtccaagat cggggacttt gaacctgaag attggaagcg gatcgtccat
     2341 cggtggcgaa cgaaactgaa tgatccggac aaattcgaag ccacgtgcga agcggcgatc
     2401 gcgaggtatc ccaagatcct cgaattcgat actacggcgc acgtcgggca gaacacaggc
     2461 gagaccgaat ggttcacgcc ggctgactac atcgaagccg cgcgccgtgt cctcggtgcc
     2521 attgacctcg atccagcctc gacgtcggcc gccaacaaga tcattcaggc gaccacgatc
     2581 tacacagccg cggattctgg cctctcgaag gactggtcgg gccgcgtttg gatgaaccca
     2641 ccatacgcgc aaccgctgat cgaacacttc gccgaaaagc tttcagcgag tgttcaggcc
     2701 ggcagtgtca cggcggcaat cgccctcgtc aacaatgcca cggagacggc ctggtttcgc
     2761 gcgctggcca aggtcgcctc atctgtctgc tttcctgaag gtcgtattcg cttctggcat
     2821 cccaagaaag agacggcgac tcccctgcaa ggccaggccg tgctctattt cggcatcgag
     2881 gttggtctct ttcagcgtga gtttgccacg ttcggcgttg tctggatgaa gccatgacgc
     2941 aattacgaaa cgaccattgt ccagagtgtg attacgacct cgccccgatc tcgaattggt
     3001 ttgattctgt cctggctggc attgggcatc gtggtagttc atttacggac gtcgatcgcc
     3061 tcgtaattcg ggcactgact cacgacgggt tctcgcggcg gtttcttttc caagaattca
     3121 agcgcccaac ggaggagtgc tcgaacgggc aatggtgggc gttgtccgat ctggccaggc
     3181 aacctcgcac gaccgtgtgg ctcgcacgcc agtgcgatgg attgaaaagc atagaactga
     3241 ctgtcttttt ctctgaaccc agcgccggat tgttgaaggc cgagacgttg tcactcgatg
     3301 cctatcggca gcgctacgcc gattggtgga atcaagtgca agcgaagcct gcagacggca
     3361 tcgcggatcg actcgtgtgg tccgaatacg tcaagcacga tccttcgctg caggcgtttc
     3421 tggccgcaga actcgagcaa gagcggatgg ccttgcatgt ggccaggctt gaacgcgatc
     3481 actggcgacg tacggcagag gcgctgtccg ccaaggttgt cgtcaggact cgtcccaaaa
     3541 ctctcggcgt cattgattcg ttcgatctcc ccgaggaatg aagctatgcc tagcgcgaac
     3601 ctcgcacgcg ccacgaagac gacgacggtt gcgcggccgc tgaaggtgtt agtcccgttg
     3661 attcaagcgg acctcgaacg cggcgaccgc gcggggatgg agtactacgc tgacgctggc
     3721 gacaaattga tcgaggcaaa gtcgcaggtc gcacacggct actggggcac gtggctgtcg
     3781 aaaa
//
LOCUS       DATDHO010000153         3726 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_55775, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000153 DATDHO010000000
VERSION     DATDHO010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3726
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55775"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1377)
                     /locus_tag="VIY07_02985"
     CDS             complement(<1..1377)
                     /locus_tag="VIY07_02985"
                     /inference="COORDINATES: protein motif:HMM:TIGR00976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEY6380749.1"
                     /translation="MELARNEIRDGMRIDWDVPIQMDDGIVLRADIFRPVVDRRHPVI
                     LSYGRYAKGLSLQAGYKGNWARLTKAAPEVLEGSSNKYQNWELVDPEKWVPDGYACVR
                     VDSRGAGGSPGILDVWSPRETQDLYQCIEWAGTQPWSNGKVGINGISYYAMNQWNVGA
                     LKPPHLAAMCIWEGSSDYYRELCRHGGILSDFLNSWHPRQVASVQHGVGTRGARSVVT
                     GEWVAGPETLSGEVLAKNSADTPGEAKRRRTHDRYYAERTAEFENIEAPLLSAGNWGG
                     MGLHTRGNFEGWSRAGSRQKWLEVHGDTHFTHFYSKYGEALQKKFFGYFLKGEDTGWM
                     QQPRVSLNIRHPGEKFVLRGENEWPLARTRWTKYFLQPDGLRLEPEHTPHSASLSFDT
                     TGDGLTFSTPPLKDSLEITGPLAAKLWVSSQTSDADLFLALRLFDPAGKEVTFIGSND
                     PRVPVGLGW"
     gene            1488..1889
                     /locus_tag="VIY07_02990"
     CDS             1488..1889
                     /locus_tag="VIY07_02990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018325979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6380750.1"
                     /translation="MDIIACGSRPSRRMSAPSFTGTVWQDPIIQAPDPARIRSAWVRF
                     EPGARTAWHTHPLGQTLFITSGVGWVQTWGGPVKEIRAGDTVWIPPQEKHWHGATAEH
                     AMEHIAMQEAQGGEHVTWLEPVTDQQYSGKA"
     gene            2015..2659
                     /locus_tag="VIY07_02995"
     CDS             2015..2659
                     /locus_tag="VIY07_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lectin"
                     /protein_id="HEY6380751.1"
                     /translation="MSAPLAACIAFFCAVPAQAQQANMTFFVTSVGPGKGGDLGGLAG
                     ADQYCQQLAAAVGAGAKTWRAYLSTQGNGAVNARDRIGRGPWINAKGATIAKDVAELH
                     GPNNMTKQTVLNEKGEVTNGRGDTPNRHDILTGSQPDGTAFAGSDDRTCRNYSSSTQG
                     AVMVGHSDRVGLRDDDASRSWNSSHPSRGPDGGCSQADLRSTGGDGLFYCFAAN"
     gene            2848..>3726
                     /locus_tag="VIY07_03000"
     CDS             2848..>3726
                     /locus_tag="VIY07_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEY6380752.1"
                     /translation="MAEIENVLLLAADALLYFVVLAALLRARTRIGLGAFFCALGVMH
                     FLETYLASILYVSLPFGIVTSPGSTVLFTGKLMMLLLLYIREDAVVVRQPIYGLLFGN
                     VLLFALASIMRQHNYIPLTPGRAADFAFLNEMGALMVWGTAILFFDCIIMILLYERSR
                     NWFRDRIFPRLALCGVIVLSFDQAAFFVGLHMLTGAGLDVLLGGWIAKMGAVGLYTVL
                     AGVYLVYFERPVRRHKDTPRIWDVFDTLTYRERYEDLLARTGCDALTGALDRHSLEAH
                     GHRAVEHAAAAGRPLAL"
BASE COUNT          676 a         1138 c         1144 g          768 t
ORIGIN      
        1 ccagccaagt cctaccggaa cgcgcggatc gttcgagccg ataaaggtga cctccttgcc
       61 cgctggatca aagagccgca gtgccaggaa caggtcggca tcggatgttt gcgatgacac
      121 ccacagttta gcagcgaggg ggccggtgat ctcgaggctg tctttgagcg gaggcgtgct
      181 gaaagtcagg ccgtcgccgg ttgtgtcaaa gctcaggctt gcggagtgcg gcgtatgctc
      241 cggctccagc cgcagtccat ccggttgcag gaaatatttg gtccaccgtg tgcgcgcgag
      301 cggccattcg ttttctccgc gcaacacgaa tttctcaccc gggtgacgga tgttcagcga
      361 tacgcggggt tgttgcatcc agccggtatc ctcgcctttg aggaaatagc cgaagaattt
      421 tttctgcagc gcctcgccat acttgctgta gaagtgcgtg aagtgcgtgt cgccgtgcac
      481 ttcgagccac ttttgtctgg atcctgctct tgaccagccc tcgaaattgc cgcgggtatg
      541 caggcccatg ccgccccagt tgccggccga cagcaacggc gcctcgatgt tctcgaattc
      601 ggccgtgcgt tctgcgtaat atctgtcgtg cgttcggcgc cgctttgcct cgcccggtgt
      661 gtccgcagaa ttcttcgcaa gtacttcccc ggatagcgtc tccggcccgg ccacccattc
      721 gcctgtcacg acgcttctcg cgccgcgcgt gccgacgccg tgctgcacgc tcgctacctg
      781 acgtggatgc cagctgttga gaaaatcgct cagtatgccg ccgtgccggc acagctcccg
      841 gtaatagtcg gacgagccct cccagatgca catcgccgcc aggtgcggcg gcttaagcgc
      901 gcccacattc cactggttca tcgcgtaata ggaaatgccg ttgatgccga ccttgccatt
      961 gctccatggc tgcgttccgg cccattcgat gcactggtaa aggtcctgtg tctcgcgcgg
     1021 cgaccagaca tccagaatac cgggcgaacc gccagcgcca cgcgagtcaa cgcggacgca
     1081 tgcatagccg tcgggcaccc atttctcggg atcgacgagc tcccagttct gatacttatt
     1141 gcttgatcct tcgagcacct ccggcgcggc tttggtcagg cgcgcccaat tgcctttgta
     1201 gcctgcctgg agggacaacc ccttcgcata tcgaccgtag ctcaaaataa ccgggtgcct
     1261 gcggtcaacg accggccgaa aaatgtcggc tcgcagcacg atcccgtcat ccatctggat
     1321 cggaacatcc caatcaatcc gcattccgtc ccgaatttcg tttcttgcca gctccatgtc
     1381 agccctgatc gtcgaagcga ggatgggagg ctttttatga gcggcagggt agagtattgc
     1441 aacgcagact tcgctggacc acggcattgc catcgggagg aattcatatg gacattattg
     1501 cttgcggatc acgcccctcg cgcaggatga gcgcgccaag cttcaccgga acggtttggc
     1561 aggatccgat cattcaggcg ccggatccgg cgcgcattcg atcggcgtgg gtgcgattcg
     1621 agccgggcgc gcggaccgca tggcatacgc atccactcgg tcagacactg ttcataacgt
     1681 cgggcgtcgg atgggtgcag acctggggag gcccggtcaa ggaaatccgg gccggcgata
     1741 ccgtctggat tccgccgcag gaaaagcact ggcacggcgc aacggccgaa cacgcgatgg
     1801 aacatattgc catgcaagag gcccagggcg gcgaacacgt cacctggcta gaacctgtca
     1861 ccgaccagca atattccggc aaagcttgag gccgatcggg aacatcaagc gcgcgtgatc
     1921 cgaggaatag cagagcaaga ttggtgttgt gtccctcgcg accgcgggca gggcccgcgc
     1981 aatatcggga ggtaataaga tgaccatcac tcggatgagt gcgccactgg ctgcctgtat
     2041 cgcttttttc tgtgcggtcc ctgctcaggc gcaacaagcc aatatgactt ttttcgtaac
     2101 cagcgtcggg ccgggcaaag gcggcgacct tggcgggctt gccggggccg accagtattg
     2161 ccagcaactg gcggcggcgg tcggagcggg tgcgaagacc tggcgcgcct atttgtcgac
     2221 gcaaggcaac ggcgcggtga atgcgcgcga ccgcatcggc aggggaccct ggattaacgc
     2281 aaaaggcgcc acgatcgcca aagacgtcgc tgagttgcac ggcccgaaca acatgaccaa
     2341 gcaaacggtc ctgaatgaaa agggcgaggt caccaacggc cgcggcgata ctccgaaccg
     2401 gcacgacatt cttaccggct cacagccgga tggcacggca ttcgccggaa gcgatgatcg
     2461 cacctgcaga aattattcga gcagcacgca aggcgcggtc atggtggggc attcggatcg
     2521 tgtggggttg cgcgacgatg atgcgtcccg gtcgtggaat tcgtcacatc cctcgcgcgg
     2581 gccggacggc ggttgttcgc aggccgatct gcgcagcacg ggtggcgacg gactgttcta
     2641 ttgtttcgcg gccaattaga cacggcatac aaaataccag gaacttggcc ggcgaaagcg
     2701 tggatttcct gcgctgcgcc ggcctcgctg gctttttcgc ctgaatcgtc catgctatcg
     2761 atgccggggg gacacggctt tcgactgagc tgatgcgagt taggatcctt tgcgccgggt
     2821 ctggccggcg cgaggtcatg tggggcaatg gctgaaatcg aaaatgtcct tctgcttgcc
     2881 gcagacgcac tcctttattt tgtagtcttg gccgcgctgt tgcgcgcccg cacgcgcatt
     2941 ggattgggcg cattcttttg cgcgctcggc gtgatgcatt tcctcgagac gtaccttgcc
     3001 agcattcttt acgtctcgct cccgttcggc atcgtcacct cgccggggtc caccgtgctg
     3061 ttcaccggca agctcatgat gctgctgctc ctctatatcc gcgaggacgc ggtcgtcgtg
     3121 cgccagccca tttacgggct gctgtttggc aacgtcctcc tgtttgcgct cgcctccatc
     3181 atgcgccagc acaactacat cccgcttacg ccgggtcgcg cggcagactt cgccttcctc
     3241 aacgaaatgg gggcgttgat ggtgtgggga acggcgatcc tgttcttcga ctgcatcatc
     3301 atgatcctgc tgtacgagcg gtcgcggaac tggtttcgcg accgcatatt tccgcgactg
     3361 gcactgtgcg gcgtgatcgt tttgagcttc gatcaggccg ccttcttcgt cggcctgcac
     3421 atgctcacgg gcgcaggact ggacgtgctc ctcggcggct ggatcgccaa aatgggtgcg
     3481 gtggggctgt acacggttct tgccggcgtc tacctggtct atttcgagcg gcctgtcagg
     3541 cggcacaagg acacgccgcg gatctgggac gtattcgaca cgctgaccta ccgcgagcgg
     3601 tatgaagacc tgctcgcgcg cacggggtgc gacgcgctga cgggcgcgct cgatcgacat
     3661 tcgctggaag cacatggcca ccgcgctgtc gagcatgctg cggccgcagg ccgtccgctg
     3721 gctcta
//
LOCUS       DATDHO010000154         2832 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_55800, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000154 DATDHO010000000
VERSION     DATDHO010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2832)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2832)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2832
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_55800"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /locus_tag="VIY07_03005"
     CDS             <1..812
                     /locus_tag="VIY07_03005"
                     /inference="COORDINATES: protein motif:HMM:NF012307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="reverse transcriptase domain-containing protein"
                     /protein_id="HEY6380753.1"
                     /translation="FDTIPHSALITCVARRISDGKMLHLIQMWLKAPVEETDERGHRR
                     MSGGKKATRGTPQGGVISPLMATIYMHRFIKAFRKYGLDRRYGAVLVTYADDFVVLCR
                     HGAAEVLDTTRRWMTSIGLALNETKTRVCNARCESFDFLGYTFGPMYSPRTGGRYNGA
                     RPSKKAVASIRDKIRRRLRPGNQAPWEEVARALNHTVRGWAAYFSYGSVSKARHVVEL
                     HLYHTVRGFLRRRHQLAGSGTGQFPAQRVFGELGVVSFDPAYRRASVHASM"
     gene            complement(1053..1880)
                     /locus_tag="VIY07_03010"
     CDS             complement(1053..1880)
                     /locus_tag="VIY07_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6380754.1"
                     /translation="MSALDSQELTVEDAKRQRVRASGLLLKLAGIAALLAVWQAGVTF
                     LAVPTYILPTPMQVWAALKSGLFVPLDSPTGFYIPIASSLANAAMGFVIGSILGLLIG
                     SLMAEFRSVETVLMPYAFALQTLPKVAIAPLIVIWFGFGNGSKIAMAALLAFFPLMVN
                     SFTGIRNTEPERIDLMRSLSASRLEIYARVKLPSAAPFIFAGLDMAAVYALLGTIVAE
                     FLGAQRGIGVTIVQAQAVTDVAGVFAALIILGALGILLHLIIRAIRRRIVHWDERRG"
     gene            complement(1880..2530)
                     /locus_tag="VIY07_03015"
     CDS             complement(1880..2530)
                     /locus_tag="VIY07_03015"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380755.1"
                     /translation="MSLVGPSGCGKSTFLRILAGLEPASGGRLSIAGHAVSGPSPDVG
                     VVFQSATLLPWLTVAQNTGLPLRVGPARGRAPTGVQALLEIAGLQGFENKYPYELSGG
                     MQQRAAICRALARDPKILLMDEPFGALDALTRERLNVELQRIWQASGKTVLLITHSIT
                     ESVFLSDRVLVMSPRPGRILADFAVTLPRPRDFASTPEHPDYLRLTKEIRSVLDRA"
BASE COUNT          558 a          853 c          919 g          502 t
ORIGIN      
        1 atttcgacac gattccccac tcagcgctga tcacgtgcgt ggcacgccgc atcagcgatg
       61 ggaagatgct gcatctaatt cagatgtggc tgaaggcgcc ggttgaagag accgacgagc
      121 gggggcatcg acggatgagt ggcggcaaga aggccacccg aggaactccg cagggcgggg
      181 tgatttcgcc actgatggcg accatctaca tgcatcgttt catcaaggcg tttcgcaagt
      241 acggtctgga ccgccggtac ggcgcggtgc tggtgacgta cgctgacgac ttcgtagtcc
      301 tctgtcggca cggggccgct gaggtcctcg atacgactcg gcgatggatg accagcatcg
      361 ggctcgcgct gaacgagacc aagacgcggg tgtgcaacgc gcgatgcgag tccttcgact
      421 ttctcggata caccttcggg cccatgtact caccgcgaac cggcggacgc tataacggtg
      481 cgcgcccttc gaagaaagcc gtggcttcaa ttcgggacaa gattcgtcga cgattgcggc
      541 ccggaaacca ggcgccgtgg gaggaggtcg cccgcgctct gaaccacacc gttcggggat
      601 gggcggccta cttcagctac ggttcggtgt cgaaggcgcg gcacgtggtg gagctccatt
      661 tgtaccacac ggtccggggc tttcttcgcc gccggcatca gctcgccggg tctggcaccg
      721 ggcagttccc ggcgcagcgc gtgttcgggg aactgggcgt ggtgtcattc gaccctgcct
      781 atcgacgggc ttctgtgcat gcctccatgt gaaacccgtc cgagagccgg atgaccgaaa
      841 tggtcacgtc cggttcgatg agcggagagg ggaaacggag cgatgggctt ctcggcgaga
      901 gcgacgacga aaggcgccgc tcgcatttgg cgccgccggt cctgtacgac actgcgctcc
      961 tcttcgactc tacacagccg gaatttttgg gatcgatgga aaggtgatcc ggcggtgtct
     1021 cagccggcgg tttgtcggct tcgtcgcatt catcagcctc gtcgttcgtc ccaatgcacg
     1081 attcttcgcc tgatcgcgcg aatgatcagg tggagcagaa tgccgagtgc gcccaggatg
     1141 atcaatgcgg cgaagacccc cgcgacatcg gtcaccgcct gcgcctgcac gatggtgacg
     1201 ccgatgccgc gttgggcgcc gagaaattcg gcgacgatgg tgccgagcag cgcatagacc
     1261 gcggccatat cgagcccggc gaagatgaaa ggcgcggccg aaggcagctt gacccgcgca
     1321 tagatttcca gccgcgatgc ggagagcgag cgcatcaaat cgatgcgttc cggttcagtg
     1381 ttacggatgc cggtgaaact gttgaccatc aacggaaaga aggcgagcag cgccgccatg
     1441 gcgatcttcg aaccgttgcc gaagccgaac cagatgacga tgagcggcgc gatggcgact
     1501 tttggcagcg tttgcagcgc aaaggcgtag ggcatcagca ctgtttcgac gctgcgaaac
     1561 tccgccatca gcgacccgat gagaagcccc aagatcgatc cgatgacgaa acccattgcg
     1621 gcattcgcca gggagctggc gatagggata tagaaaccgg tcgggctgtc cagcggcacg
     1681 aacaatcccg atttcagagc ggcccatacc tgcatcggcg ttggaaggat gtaggtgggc
     1741 acggcgagaa atgtaacgcc ggcctgccaa accgcgagca gagctgcgat gccagcgagc
     1801 ttcaataaca agccacttgc gcgcacgcgc tgccgcttcg cgtcttcgac ggtcaactct
     1861 tgggaatcca gcgcgctcat cacgcgcggt ccagcacgga gcggatttct ttggtcagcc
     1921 gcagataatc cggatgttcc ggcgttgacg cgaaatcgcg cgggcgcggc agtgtcaccg
     1981 cgaaatcggc caggatgcgc cccggccgag gtgacatcac cagcacgcga tcgctcagaa
     2041 agacggactc ggtgatactg tgggttataa gcagcacggt ctttccgctc gcctgccaga
     2101 ttcgctgcaa ttcgacgttc agccgttcgc gcgtcagcgc atccagcgcg ccgaacggtt
     2161 cgtccatcaa tagaatcttg ggatcgcgcg ccagcgcccg gcagatggcg gcgcgctgct
     2221 gcatgccgcc tgaaagttcg tagggatatt tgttttcaaa tccctgtaga cccgcgattt
     2281 cgagcaatgc ttgcacgccg gttggcgcgc ggccgcgcgc cggaccgacg cgaaggggca
     2341 ggcctgtgtt ctgcgccacg gtcagccagg gcagcagcgt cgcgctttgg aagacgacgc
     2401 cgacatcagg cgaagggccg gagacggcat gacctgcgat cgaaagcctg ccgccgctgg
     2461 ccggctccag ccccgcgagg atgcgcagga acgtgctctt gccgcagccg gacgggccga
     2521 ccagggacac gaattcgccg tgggcaatgg aaacgttcag gtcttcaagg gcgaggaccg
     2581 tttcaccgga tgccgcggaa taggtcttcc cgacactgct ggcggcaatc agaggggacg
     2641 cgccggtttg aaccgcgtgt gcaggccgca caaattcccc cttctccaac aatggcaccc
     2701 atagcatgat agctacgcgg gacaaaacag caacggactc acagcgcatg cacatcggcc
     2761 ggcgtgacgt tctcatcgga tttgcaggtg cactggccgc tagccttgcg ccgcttggcg
     2821 tttcggcggc tc
//
LOCUS       DATDHO010000155         2837 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_254991, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000155 DATDHO010000000
VERSION     DATDHO010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2837
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254991"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..666)
                     /locus_tag="VIY07_03020"
     CDS             complement(<1..666)
                     /locus_tag="VIY07_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEY6380756.1"
                     /translation="MSKRDYYEILGVSRSCTEIELKAAFRRLAMQHHPDRNPGDKECE
                     HRFKEINEAYDVLKDGDKRAAYDRFGHAAFEHGAGGPAYGFGADFGSTFADIFEGIFG
                     MAAGRGRGSGRERGSDLRYNMEITLEEAFIGKTAQIRIPTSVTCEACSGSGAKAGTKP
                     KPCATCGGAGKIRHAQGFFTLERTCPACHGRGQVIDDPCKMCGGGGRVTRERTLSVNI
                     PTGV"
     gene            complement(808..2745)
                     /gene="dnaK"
                     /locus_tag="VIY07_03025"
     CDS             complement(808..2745)
                     /gene="dnaK"
                     /locus_tag="VIY07_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012169221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEY6380757.1"
                     /translation="MGKVIGIDLGTTNSCVAVMEGKNPKVIENAEGMRTTPSIVAFTD
                     DGERLVGQPAKRQAVTNPEKTIFAVKRLIGRRYDDPMVEKDKKLVPYKITRASNGDAW
                     VEVDGKTYSPSQISAFILQKMKETAEANLGQKVEQAVITVPAYFNDAQRQATKDAGKI
                     AGLEVLRIINEPTAAALAYGLDKQKSGTIAVYDLGGGTFDISILEIGDGVFEVKSTNG
                     DTFLGGEDFDMRLVNYLADEFQKEQGIDLRRDKLALQRLKESAEKAKIELSSTTQTEI
                     NLPFITADASGPKHLTMKLTRAKFEALVEDLIQKTIQPCKQALKDAGISAAQINEVVL
                     VGGMTRMPKVQEVVKQLFGKEPHKGVNPDEVVAVGAAIQAGVLQGDVKDVLLLDVTPL
                     SLGIETLGGVFTRIIDRNTTIPTKKSQVFSTAEDNQNAVTIRVFQGEREMAADNKLLG
                     QFDLVGIPPAPRGVPQIEVTFDIDANGIVNVQAKDKATGKEQQIRIQASGGLTESDIE
                     KMVKDAEAHAEEDKKRKAAVEAKNHAEALVHSTEKALSEHGSKIGDADRAAIENAIAD
                     LKEALKGDDASAIQAKTNALAQASMKLGEAMYKQQQEAQSSAGGSGSGGGGDGAASGE
                     KKDDVVDAEFTEVDDDKKKSA"
BASE COUNT          465 a          906 c          820 g          646 t
ORIGIN      
        1 caccccggtc gggatattga ccgaaagcgt gcgttcgcgc gtcacccggc cgccgccgcc
       61 gcacatcttg cacggatcgt cgattacctg gccgcggcca tgacaggcgg gacaggtgcg
      121 ctccagcgtg aaaaatccct gtgcatgccg aattttgccc gcgccgccgc aggtcgcgca
      181 tggtttcggc ttggtgccgg ccttagcgcc gctacccgaa caagcttcgc atgtcactga
      241 ggtcggaatt cgaatttgcg ccgttttgcc gatgaaggcc tcttcgagcg taatctccat
      301 attgtagcgg aggtctgacc cccgctcgcg gccggagccg cggccgcggc cggccgccat
      361 gccaaaaatg ccttcgaaga tatccgcaaa agtagacccg aaatcggcgc caaaaccgta
      421 cgcggggccg cccgcaccat gctcgaacgc ggcgtggccg aagcggtcat aggcggcgcg
      481 cttgtcgccg tccttgagca cgtcgtaagc ctcgttgatt tccttgaatc gatgctcgca
      541 ttccttgtcg cccggattgc gatccggatg atgctgcatt gcgagcctgc gaaaagctgc
      601 cttgagctca atctcggtgc agcttcggct tacgcccagg atctcgtaat agtcgcgctt
      661 ggacatccgg tttcagctct ggaattatcg cgccgggaca gacgtacttg attcggctgc
      721 ccggggcgcc tgcaaaaata cacccccgga ccagtgcccg ggggtgaaac tattagcggt
      781 gacctgcgca tggcgcacgc cctgcggtca ggctgatttc tttttatcgt cgtcgacctc
      841 ggtgaactcc gcgtcgacca cgtcgtcctt cttctcgccc gaagccgcgc cgtctccgcc
      901 accgccactg ccactgccac cggctgagct ttgcgcttcc tgctgctgct tgtacatggc
      961 ctcgcccaat ttcatcgaag cctgggccag cgcattggtc ttggcctgga tggctgacgc
     1021 gtcgtcgcct ttgagggctt ccttcagatc agcaatggcg ttctcgatgg ccgcgcgatc
     1081 ggcatccccg atcttggagc catgctcgga aagcgctttc tcggtggaat gcaccagcgc
     1141 ctccgcatga ttcttggctt cgaccgcagc tttgcgcttc ttgtcttctt cggcgtgcgc
     1201 ttccgcatcc ttgaccatct tctcgatgtc cgactcggtc aatccgcccg aagcctggat
     1261 gcgaatctgc tgctccttgc ccgtcgcctt gtctttcgcc tgcacgttca cgatgccgtt
     1321 tgcatcgatg tcgaaagtga cctcgatttg cggcacgccg cgcggagccg gcggaattcc
     1381 gaccaggtcg aactggccaa ggagcttgtt gtcggcagcc atctcgcgct cgccctggaa
     1441 cacgcggatg gtgaccgcat tctgattgtc ctcggcggtc gagaacactt gcgacttctt
     1501 ggtcgggatc gtggtgttgc gatcgatgat gcgggtgaac acgcctccca gcgtctcgat
     1561 gccaagcgaa agcggcgtga cgtcgagcaa cagcacgtcc ttgacgtcgc cctgcaacac
     1621 gccggcctgg atcgcggcgc ccacggcaac cacttcatcc gggttgacgc ccttgtgcgg
     1681 ctccttgccg aacagctgct tcacgacctc ctgcactttc ggcatgcgcg tcatcccccc
     1741 gaccagcaca acctcgttga tctgtgcggc cgagatgccg gcgtccttga gcgcctgctt
     1801 gcagggctga atcgttttct gaatgagatc ctcaaccagc gcctcgaact tggcgcgggt
     1861 aagcttcatg gtcagatgct tcggacccga agcatctgcg gtgatgaatg gcaggttgat
     1921 ttcggtctgc gtcgtggacg acaactcgat tttcgccttc tccgccgatt ccttgagccg
     1981 ctgcagcgcg agcttgtcgc ggcgcagatc gatgccctgc tccttctgga attcgtcggc
     2041 aagatagttg accagccgca tgtcgaaatc ttcgccgccg aggaacgtat cgccgttcgt
     2101 cgacttcact tcgaacacgc cgtcgccgat ctcgagaatc gaaatatcga aggtaccgcc
     2161 gccgaggtca tagaccgcga tggttcctga tttctgtttg tcgagcccat aggcgagtgc
     2221 cgccgccgtc ggctcgttga tgatgcgcag cacttcaagc ccggcgattt tgcccgcgtc
     2281 tttggtggct tgccgttgcg cgtcgttgaa ataggctgga acggttatga cagcctgctc
     2341 gaccttctgc ccgagattgg cttccgctgt ctccttcatt ttctggagaa tgaaagcgga
     2401 gatctgcgat ggcgagtagg tcttgccgtc gacttccacc caggcgtcgc cgttcgaagc
     2461 cctggtaatc ttgtagggga cgagcttctt gtccttttcg accatcgggt cgtcgtagcg
     2521 ccggccgatc aggcgcttga ccgcaaagat agtcttttcc ggattggtga ccgcctgccg
     2581 cttggccggc tggccgacga gacgctcgcc gtcgtccgta aatgcaacga tcgaaggcgt
     2641 ggttctcatg ccttcagcgt tttcgatgac tttgggattt ttgccttcca tgacggcaac
     2701 gcacgaattg gtggtgccga ggtcgatgcc gatgacctta cccatggttc ttcctctcaa
     2761 attgcggcag accggccggg ccgcttagcg cccgatggga atgtcggcgg ctcacccgca
     2821 gaccccccga tccagcc
//
LOCUS       DATDHO010000156         1589 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_254995, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000156 DATDHO010000000
VERSION     DATDHO010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_254995"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..903)
                     /locus_tag="VIY07_03030"
     CDS             complement(<1..903)
                     /locus_tag="VIY07_03030"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6380758.1"
                     /translation="MIRELLERGAASHTAIIVAGEGRALSYEQLKGEVDKLASILRKL
                     GIQRTDRIAMALPNGLEMIVSFLAASTAGTAAPFNPAYKVEEFRFYLEDTNAAALIVP
                     KGGAEQARLAAGDRIRLIEIGLDDRGQIQVSWQGSAAAETATALPEKDDIALVLHTSG
                     TTSRPKRVPLSHTNLMTSTHNVAETYQLTPNDVSFCVMPLFHVHGLVASTLATLYTGG
                     TIVVVPQINPLSFWTTVDAHKVTWYSAVPTLHQMLLARARGTEKPKGAENLRFIRSCS
                     AALAPKTMEELESKFGAPVLEAYGM"
     gene            1225..>1589
                     /locus_tag="VIY07_03035"
     CDS             1225..>1589
                     /locus_tag="VIY07_03035"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY6380759.1"
                     /translation="MPKIFLWPPLDDGCNLKRMRYSVEQKAKTRRKIVTAAARSFRQR
                     GCESNGIARLMKELGLTHGGFYRHFESKEDLYAEAVARGFEEVADRMVGAAEGAPKGQ
                     ELHAMIEQYLSVDHLNDPGT"
BASE COUNT          331 a          423 c          517 g          318 t
ORIGIN      
        1 catcccgtaa gcttcgagca ccggggcgcc gaacttcgat tccagctctt ccatggtttt
       61 cggcgccagg gctgcgctgc acgagcgaat gaagcgcagg ttctcggccc cttttggttt
      121 ctcggttccc cgggcgcgag ccagcagcat ctggtgaagc gtgggaacgg cagagtacca
      181 ggtcaccttg tgagcgtcga ccgtggtcca gaaggaaagc ggattgattt gcggcaccac
      241 gacgatggtt ccgcccgtat agagggtagc gagcgtcgag gccaccaggc cgtgcacatg
      301 aaacagcggc atgacgcaga aagagacatc gttcggggtt agctggtagg tttcggcgac
      361 gttatgggtc gaggtcatca ggttcgtgtg cgaaaggggc acgcgcttgg gtcggctggt
      421 cgtgccgctg gtatgaagaa ccagggcgat atcgtctttt tcgggaaggg ccgtcgccgt
      481 ctcggcggcc gcggacccct gccaggagac ctggatctgt ccgcggtcat cgagcccgat
      541 ctcgatcagg cggatgcgat cgcctgccgc cagccgtgcc tgttccgctc cacccttggg
      601 cacaatcaac gcggcggcgt tggtatcttc cagatagaac ctgaactctt cgactttgta
      661 tgccggatta aacggtgcag ccgtcccggc ggtcgaggcg gcaagaaacg agacgatcat
      721 ctcgaggccg ttgggcagcg ccatggcgat gcggtcggtg cgctggatgc cgagcttgcg
      781 gagaatcgag gcaagcttgt cgacttcccc tttgagctgt tcgtaggaga gcgcccggcc
      841 ctcgccggca acaatgatgg cggtgtggga agcagcccca cgctcgagca attcgcgaat
      901 catgacatcc cccccggcgg tgaaggattg tactatgtcg attctcattg atgaaatcaa
      961 gctaacaaca cggcgattca gacactgctc ggtggccgag acgaagaggg gaaaagcaca
     1021 aaagggccga cagtacgcag cccggcctcg atgacggtga ataaactgat tcagggctcg
     1081 aagagccgac aatgatttag ccatgcccgt cgggtgtggt ttgcgttggg gatgagtgga
     1141 ggtcccaaga accggacgcg cggtcggcat cttgcgcctc tgcggaatga cgaatcttgt
     1201 tttgattgtt ccgacggtcg attgatgcca aaaatttttc tttggccacc tttagatgat
     1261 gggtgtaatc ttaagcgcat gaggtactcg gttgagcaaa aagccaagac gcgccggaag
     1321 atcgttactg cagcggcacg ctcgtttcgg cagcgcggtt gcgaaagcaa cggcatagcc
     1381 cgactaatga aggagttggg tttgacccac ggcggcttct accggcattt tgagagtaaa
     1441 gaggacctct acgcggaagc tgttgcgcga ggtttcgaag aggtggccga tcggatggtc
     1501 ggtgcggcgg agggcgcccc taaagggcag gagttgcatg caatgatcga acaatacctc
     1561 agcgtcgacc acctgaatga ccccggaac
//
LOCUS       DATDHO010000157         2486 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_304477, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000157 DATDHO010000000
VERSION     DATDHO010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304477"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1238)
                     /locus_tag="VIY07_03040"
     CDS             complement(<1..1238)
                     /locus_tag="VIY07_03040"
                     /inference="COORDINATES: protein motif:HMM:NF002674.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tm-1-like ATP-binding domain-containing protein"
                     /protein_id="HEY6380760.1"
                     /translation="MSRVCVAVLATLDSKHEAARFVCAALTAAGATPWLVDLSLRPHE
                     HDFADVSGGVVAESAGLAWAELGRLARADAAKAMVKGGTEIVRARFARGEIDGVLGVG
                     GANGSTIACAIMRALPLSFPKVMVTPVAATAAVQWYVAESDIAMYPTIGDISLNRITR
                     AAMENAAHALAEMARAWKRQDTAARVPLLGVSSFGNTQPAVDRITAGLEAEGFEVIHF
                     HASGPGGRALESLAGAGELAGVIDLTTSELTDLVTGGVYSAGETRLTAAGAAGLPQVV
                     VPGCLDFTNWWVGQVPDKYRQREFYQYNVEILLMRTNAEEFATLGKLFGERLRAAKGP
                     VRVLIPSGGMSQLVARNTYDLAGNERGAWAQPATDRVFLETLRRYLPTGTIRELPHHI
                     NDTAFADACVAEMIEMVAARP"
     gene            complement(1239..2087)
                     /locus_tag="VIY07_03045"
     CDS             complement(1239..2087)
                     /locus_tag="VIY07_03045"
                     /inference="COORDINATES: protein motif:HMM:NF020927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate hydrolase family protein"
                     /protein_id="HEY6380761.1"
                     /translation="MVGKYSRATIVERLQAEIRGGRAIYDALCGSGITAKMAARGGAD
                     IVTTHCLAYFRMQGMSSMAGYLPICDANALTLELGERALVNVVRDCPLVAGLLCVDPT
                     RDMARFLENIAHAGFDGVMNCPTVALIDGKFRSDLEETGMGFACEVEVLGRASRMGLF
                     TKAFCTSPEEALAMAEAGVDNIIVHFGNSSGGTIGSKTVLGEDAARKRAGILLDALSA
                     KFPECIVTCHGGAIETPTDFERLLKIEPRLHGYVGGSSAERFPIETSVVQAARQFKNV
                     KLPKAN"
     gene            2153..>2486
                     /locus_tag="VIY07_03050"
     CDS             2153..>2486
                     /locus_tag="VIY07_03050"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEY6380762.1"
                     /translation="MQVFIENEAGSRRKNIYDERSLRYLRTVDVSASYPYPYGFIIGT
                     VSGDDDAVDCFVLTTEPLVAGTTLECDLIGLLEQVEDGEIDHKVLAVPSGAYATVDEA
                     VIAALKKFI"
BASE COUNT          505 a          770 c          720 g          491 t
ORIGIN      
        1 ggccgcgccg ccaccatctc aatcatttct gccacgcatg catccgcgaa ggctgtgtcg
       61 ttgatatgat gcggcaattc cctgattgta ccggttggca ggtagcgcct gagcgtttca
      121 aggaacactc gatcggtcgc aggctgtgcc cacgcgccgc gttcattgcc ggcaaggtca
      181 taagtgttgc gggcgacgag ttggctcata ccaccgctcg ggatgagcac tctgaccggg
      241 cctttggcag cgcgtagccg ttcgccgaat aattttccga gcgtcgcgaa ttcctcggca
      301 ttggtccgca tcagcaagat ctcgacgttg tattgataga attcacgctg ccggtatttg
      361 tcgggcactt gccctaccca ccaattggtg aaatcgagac aacctgggac caccacctgc
      421 gggagcccgg cggcaccggc ggctgtgagc cgcgtctcgc ccgcgctgta gacaccgccg
      481 gtgacaagat cagtcagttc ggaggtagtg agatcaatta ctccggcaag ttcgccagct
      541 cccgcaaggc tctcgagcgc gcgaccgccc ggtccggagg cgtgaaaatg aataacctcg
      601 aatccttcgg cctccagccc cgccgttatg cggtcgaccg ccggctgggt attgccgaag
      661 gaggatactc ccagcaacgg aacgcgagcg gcagtgtcct gccgcttcca cgccctcgcc
      721 atttcggcca aggcatgagc ggcgttttcc atggccgcgc gagtaatgcg gttgagtgag
      781 atgtcgccaa tagtcggata catcgcgatg tcgctttcgg cgacgtacca ttgcacggcc
      841 gcggtcgcag caaccggcgt caccatgact tttggaaatg atagcggtaa cgcgcgcatg
      901 atagcgcagg cgatagtcga gccgttggcc ccgccaacgc cgagcacgcc atcgatctcg
      961 ccgcgcgcga acctggcgcg cacgatttcg gtgccgccct tgaccatggc cttggcagca
     1021 tccgctcgcg cgaggcgtcc tagttcggcc cacgccagtc ctgcggattc tgcgactacg
     1081 ccgccgctaa catccgcgaa atcgtgttcg tgcgggcgca gcgacaagtc gaccagccat
     1141 ggcgtcgcgc cggctgcggt tagcgcggca cagacgaaac gcgctgcctc gtgcttactg
     1201 tcgagcgtag caaggacggc gacgcagacc cgggacacct agttcgcctt cggaagcttg
     1261 acgttcttga actgccgcgc tgcttgaacc acggacgtct caatcgggaa gcgctctgca
     1321 gacgaaccgc cgacatagcc atgcagacgc ggctctattt tcaagaggcg ctcgaaatcg
     1381 gtgggtgttt cgatagcgcc cccatggcag gtgacgatgc attcggggaa ttttgcggac
     1441 aacgcatcga gcaaaatgcc agcgcgcttt cgcgcggcat cttcgccgag aaccgttttc
     1501 gagccgatcg tgccgcccga gctgttgccg aaatgcacga tgatgttgtc caccccggct
     1561 tccgccatgg ccaacgcttc ctccggcgag gtgcaaaatg ccttggtgaa caggcccatc
     1621 cgcgaggcgc gcccaagcac ttcgacctcg cacgcgaatc ccatgccggt ttcttccaaa
     1681 tcgctgcgga atttcccgtc gatcagcgcc acggtcggac agttcatcac gccatcaaac
     1741 cccgcatgcg cgatgttttc gagaaatcga gccatgtcgc gtgttggatc gacacacagc
     1801 agtcccgcca caagagggca gtcgcggacc acgttcacga gtgcacgctc gcccagttcg
     1861 agcgtgagtg cgttggcgtc acaaatcggc aagtagcctg ccatcgaact catgccctgc
     1921 atgcggaaat aagcaagaca atgggtagtg acgatgtcgg caccaccgcg cgcggccatc
     1981 ttggcggtga tgccggagcc gcacagggcg tcatagatcg ctcgcccgcc acgaatttcc
     2041 gcctgcaggc gctcaacgat cgttgcacga ctatattttc cgaccatgcc gtccccggcc
     2101 cgctaaactc aatgaccgta gattggggcc caattaatat aacgggagat tcatgcaggt
     2161 ctttattgaa aacgaggccg gttcgcgacg caagaatatc tacgacgagc gcagcctgcg
     2221 atatcttcgg acagttgatg tatcggccag ctacccatat ccgtacggtt ttatcattgg
     2281 caccgtcagc ggcgatgacg atgcagttga ctgctttgta ctaacaacag aaccactcgt
     2341 cgcgggtaca acgctggaat gtgatctcat aggactgcta gagcaggtcg aggacggcga
     2401 gattgaccat aaggtgcttg ccgtcccctc cggggcctat gcaacggttg atgaggctgt
     2461 cattgcagct ctaaaaaaat tcatct
//
LOCUS       DATDHO010000158         1884 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_255057, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000158 DATDHO010000000
VERSION     DATDHO010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255057"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            585..1622
                     /locus_tag="VIY07_03055"
     CDS             585..1622
                     /locus_tag="VIY07_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEY6380763.1"
                     /translation="MGQLGFFDADKRLKALSAKGDPLEAIDRLVPWESFRAEVEAVVL
                     TSDELKKSSAGRKPFDALLMFRMLVLQALNNLSDEQVEYQVRDRLSFSRFLGLAIEDS
                     IPDSTTLWLFREKLAKAGLIEKLFDCFDQHLAAKGYMARGGQIIDASIVPVPTQRNSR
                     DENAELQAGRTPAAWKQKPAKVRQKDRDARWTKKHGRSFFGYKNHVNADAKHKLIRHY
                     AVTDAAVHDSQELDGLLDTGNTCNDVFADSAYRSTKIEGRLRASGFKSRIHRRATRNH
                     PLSNAQLKANRNRSKIRARIEHVFGAQESSPGGRIVRTIGIVRARAKIGLQNLAYNIR
                     RLVTLERIATA"
BASE COUNT          405 a          523 c          588 g          368 t
ORIGIN      
        1 tggtggcgcg agtgagaggg aatgcaagac cgtctttggg ggcatggtgg tattcggaga
       61 ttacaaggat caacgtgttc aagagcgaaa ctgaaatgcg atcattgtgc catggttttc
      121 gaccgcgtcg tcctccggct ctggtcacct tgaattccgc tgtgcggcct ctggcggaaa
      181 taccagcctc gattggtcgc gatttcgtca aaagttgaac attcgaggtg tcgcggcgca
      241 tgaatgaaag ggacggttca gccatttcgc agttcggcag tcattgcatg cgaccgatga
      301 agcatccgaa ctaccgtttg cgcgtgccat gcgccccggt cggagtcgga atgccgcgca
      361 gcgttattgc gccgccactt ggcgcgccga catgcctgcg cctttcaaca cggcgaggac
      421 gggcgcgagc taccgtgctc gctccaatgc ttattttggt tctaagaaag cttaaagatt
      481 gtatcaactt gccgatagca tgactatagg gcacttcgaa aaatagctcc ttcccccgac
      541 ctgtgcgaat ctgatgtgtg agattttgat tcgcggaggc gacgatgggt cagctgggat
      601 ttttcgatgc cgataagcgt ttgaaagcct tgtcagcgaa gggagatccg ctcgaagcca
      661 tcgatcgtct cgtgccgtgg gagagctttc gcgccgaggt cgaggcggtg gtgctcacgt
      721 cggacgagct gaagaagagc agcgccggcc ggaagccgtt cgatgccctc ctgatgttca
      781 ggatgctggt tctgcaagcg ctcaacaatc tgtcggacga gcaggtggaa tatcaggtgc
      841 gcgatcggct gtcgttctcg cgctttctgg ggctcgcgat cgaggacagc attccggatt
      901 caacgacgct ttggctgttc cgcgagaagc tggccaaggc cgggctgatc gagaagctgt
      961 tcgactgctt cgaccagcat cttgcggcca agggctacat ggcgcgtggc gggcagatca
     1021 tcgacgccag tatcgtgccg gtgccgacgc agcggaacag tcgcgacgag aacgccgagc
     1081 tgcaggctgg gcgcacacca gcggcgtgga agcagaagcc cgccaaagtg cggcagaagg
     1141 accgcgatgc gcgctggacc aagaagcatg gccgcagctt cttcggctac aagaaccatg
     1201 tgaacgcgga cgccaagcac aagctgatcc ggcattatgc ggtgaccgat gcggccgtgc
     1261 acgacagcca ggagctggat gggctgttgg acacgggcaa cacctgcaat gatgtgttcg
     1321 ccgacagcgc ttatcgttcg accaagatcg aggggcgact tcgagccagc ggctttaaga
     1381 gccgtattca tcggcgcgcc actcgcaacc atccgctatc gaatgcgcaa ttgaaagcga
     1441 accgtaacag gagcaaaatt cgcgcccgca tcgaacacgt gttcggagct caagagtcct
     1501 cgccgggcgg ccggatcgtg cgcacgatcg gcatcgtgcg ggcacgcgcc aagattggct
     1561 tgcagaacct ggcctacaac attcgccgcc ttgtgacgct ggagcgcatc gccaccgcat
     1621 gagagtgaaa tctgctcgaa gcatcaggaa aggggcgtcg agtggacaaa cggcagccag
     1681 cctggtggaa aatcacgctc gaaaaccgcc atcatctgca ctgatagcca atcacgcgtc
     1741 gaaaccggca ttgttcgagg tgcccttgta tctatcgtcg cgtgcgggcg cggtcgaaac
     1801 gctgcaatcg aacaacaggg ctgccgttgc gcgatgccgc gtcggcaatc cgattaacca
     1861 aaacatcctt tcgctgcggc gagc
//
LOCUS       DATDHO010000159         1792 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_106417, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000159 DATDHO010000000
VERSION     DATDHO010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106417"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..788)
                     /locus_tag="VIY07_03060"
     CDS             complement(<1..788)
                     /locus_tag="VIY07_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY6380764.1"
                     /translation="MLTRLAITTAPALFVLLWSTGFIGARYGMPYIEPLTFLAVRMAF
                     VVVIMAAIALFAGARRPNANEVGHSLVAGSLVHGLYLGGVFIAISQGVPAGISALIPG
                     LQPIVTSTLANRFMGEKVTRLQLVGLALGLVGVLLVLHDRSILLAGSALGWVASFLSL
                     IGIALGALYQKRYCGAIDWRAGNLVQYIGAGVLFTLGAFAFETREINWTGELIFAMAW
                     LVLVLSIAAVGLMYWLIRRSAATGFASLFYLVPVVTAFFAYILFG"
     gene            942..1112
                     /locus_tag="VIY07_03065"
     CDS             942..1112
                     /locus_tag="VIY07_03065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380765.1"
                     /translation="MKMIAFYVVFVLIGESLAYFVGRTVEIWSKAASLPGFLACFFLV
                     FWGAWRLAVRVT"
     gene            1223..1540
                     /locus_tag="VIY07_03070"
     CDS             1223..1540
                     /locus_tag="VIY07_03070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380766.1"
                     /translation="MTDPRFTDPRLNDPDPRLSDPVVRREEGTGGMWGWIAGVAVLLL
                     IGFLIIAGWNNNSNTTATSGSSGTTTSSSAPRTTPPATTGSGSTSTQPITPPAAPAPS
                     KSQ"
BASE COUNT          393 a          551 c          537 g          311 t
ORIGIN      
        1 ccgaaaagga tgtaagcgaa gaaggcggtc acgaccggca ccagatagaa caggcttgcg
       61 aacccggtcg ccgcggagcg gcggatgagc caatacatca atccaacggc tgcgatcgac
      121 aggaccagca ccagccaggc cattgcgaaa atcagctcgc cggtccaatt gatttcgcga
      181 gtctcgaatg caaaagcgcc aagcgtaaac agcactcccg cgccgatgta ttggacgaga
      241 ttgccggcgc gccagtcgat agccccgcaa tagcgcttct ggtaaagcgc gccgagcgca
      301 atgccgatca gggacaagaa gcttgcaacc cagccgaggg cggagccagc caacaagatg
      361 ctgcggtcgt gcaggacaag caaaaccccg accagcccca gcgcaagccc gaccaattgc
      421 agccgcgtga ccttctcacc catgaagcgg ttggcgagtg tcgaagtcac gatcggttgc
      481 agtcccggga tcagcgccga aatgccggcc ggtacccctt gactgatcgc gatgaacacg
      541 cctccgaggt aaagtccgtg caccagcgag cctgcaacga ggctatggcc gacctcatta
      601 gcattaggcc gccgcgcacc ggcgaagagc gcaattgcgg ccatgatgac cacgacgaaa
      661 gccatccgca cggccagaaa agtcaacggc tcgatgtacg gcatgccgta gcgagcgccg
      721 ataaatcctg tgctccacaa aagcacgaac agcgcaggcg cggtcgtaat cgccagtcgg
      781 gtcagcatgg gtatccgacg gggtgaagac aattgaggcg ggccgcgcgc ctataccatt
      841 ttttctgagg acgtgccttg cccccactgg cgggatgggg cgcaatgggc ctgagctgag
      901 cctgtgcgaa ggccgcgcag gggtgattgg ggcacgccgc catgaaaatg atcgcgtttt
      961 acgtggtttt cgtcctgatc ggcgagagcc tcgcgtactt cgttggccgg accgtcgaaa
     1021 tttggtccaa ggccgccagt ttgcccggat ttctcgcctg tttcttcctt gtcttctggg
     1081 gtgcctggcg actcgcggtt cgcgtgacct gatctttttc aagttcccga acgcaaagct
     1141 gtttattcgg aaccggtgca acggctgacg ggtttcccat gttcgagacg acgcgaagcg
     1201 cgtcccgaac aaggaggaag tcatgactga tccacgtttt accgatccgc ggttgaacga
     1261 cccggacccg cggttgagcg atcctgtcgt ccgccgtgaa gagggcacgg gcggaatgtg
     1321 gggttggatc gccggtgtgg cggtgctgct gctgatcggt ttcctgataa tcgccggctg
     1381 gaacaacaac agtaacacta ctgcaaccag cggctcttcg ggtacaacga cgagcagctc
     1441 tgctccgcgc acgacgccgc ccgccacaac gggttccggc tcgacgtcaa cccaaccgat
     1501 cacaccgccg gcagcgcctg ccccgtcaaa gtcacagtag cgcgctgaat ggctcaatca
     1561 gaaaccgtcc cggcccctca cagcgccggg acggtaaact cgaggacgct gccgtgaatt
     1621 ccttcgaaaa ggatccactt cgaaatctgc ccctggtgac accgccgcag accggtcaaa
     1681 aacgcgcagc ctggtggcaa attaccgctg cagcgatcgg tgctgttgcg atcgtcttcg
     1741 tgtttctctg gggcatcagc aatcagcgtg acgagaatgc cggccagcca ac
//
LOCUS       DATDHO010000160         1576 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_106455, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000160 DATDHO010000000
VERSION     DATDHO010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_106455"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            176..958
                     /locus_tag="VIY07_03075"
     CDS             176..958
                     /locus_tag="VIY07_03075"
                     /EC_number="1.1.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008550696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003858 - 3-hydroxybutyrate dehydrogenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HEY6380767.1"
                     /translation="MLKGKTALITGSTSGIGLATARALAQNGANVILNGFGDKAEIER
                     LRAGIEKDLGVKARYSAADMTKPTEIAEMVRAGEKEFGAIDVLVNNAGIQHVANIEDF
                     PVDKWDAIIAINLSSSFHTIRAAVRGMKARKWGRIVNIASAHGLVASVQKVAYVAAKH
                     GLVGLTKVVALETANDGVTCNAICPGWVLTELIKQQIETRAKANNQSFDQAKVSLLSE
                     KQPMLDFTKPESIGALAVFLCSDAAATITGSAYSIDGGWVAQ"
     gene            955..>1576
                     /locus_tag="VIY07_03080"
     CDS             955..>1576
                     /locus_tag="VIY07_03080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY6380768.1"
                     /translation="MIQFLSRAFGVDKPEKPKARKRINLALQGGGALGAFTWGVLDHL
                     IEDGRLTIEGISGTSAGAVNAIMLADGLARGGPDEARKRLADFWRAASLGGNLPDVQR
                     RAVDRLFSFWPIEDTPAGLWMQALTRYLSPYDFNPLNINPLKDLIERFVDFNAVRACK
                     DLQLFVSATNVRSGQLHVFRREEMSADMIVASACLPHLFRAVEIDGD"
BASE COUNT          326 a          472 c          472 g          306 t
ORIGIN      
        1 tacagcgcgt gcgaatgttt tgctggccaa ggaatgttcc gccttcaacg gaagtctaac
       61 gtcaaactgc tccaaaccct acgcgtcgaa catatatatt gcactgcaac aagaatgcag
      121 gcaggttccg cccgcgctta aaaggcccgc tcgtggccca tcaaatgagg accgaatgct
      181 gaaaggcaag accgcgctta ttaccggctc gacctcgggc atcgggcttg caactgcccg
      241 cgccctcgca cagaacggcg ccaacgtcat cctcaacggc tttggcgaca aggccgaaat
      301 cgaaagactg cgcgccggaa tcgaaaagga ccttggcgtc aaggcgcgtt actcggccgc
      361 cgacatgacg aagccgaccg aaattgccga gatggtgcgc gcgggtgaaa aggaattcgg
      421 cgcgatcgac gtactggtga acaacgcggg catccagcac gtggcgaaca tcgaggattt
      481 cccggtcgac aaatgggacg cgatcatcgc catcaacctg tcttcgtcgt ttcacacgat
      541 ccgtgccgcc gtccgaggca tgaaggcgcg caagtgggga cgcatcgtca atattgcgtc
      601 ggcgcatggt ctcgtcgcga gcgtccagaa agtcgcctac gtggcggcca agcatggcct
      661 cgtcggcctt acaaaggtgg tcgcgctcga aaccgccaac gacggcgtca cgtgcaatgc
      721 catttgcccc ggctgggtgc tcactgaact gatcaagcag cagatcgaaa cccgggccaa
      781 agccaacaac caatcttttg atcaggcgaa ggtgtcgctg ttgtcggaaa agcagccgat
      841 gctcgatttc accaagcctg aaagcatcgg cgcccttgcc gtgttcctct gcagcgatgc
      901 cgctgcaacg atcaccggct ctgcctattc gatcgacggc ggctgggtgg cacagtgatc
      961 cagtttcttt cgcgtgcctt tggcgtcgac aagccggaaa agccgaaagc gcgcaagcgc
     1021 atcaaccttg ccttgcaggg cgggggtgcg cttggcgcct tcacctgggg cgtgcttgat
     1081 catctcatcg aggatggccg gctgacgatc gaagggattt ccggtacgtc ggccggcgcg
     1141 gtcaacgcga tcatgcttgc cgacgggctg gcgcgcggtg gtccggacga agcgcgcaag
     1201 cggctcgccg atttctggcg cgcggcaagt ctcggtggaa atctgcccga tgtgcagcgg
     1261 cgcgcagtcg atcggttgtt ttccttctgg ccgatcgagg acacgccggc gggcctctgg
     1321 atgcaggcac tcacgcggta tctgtctccc tacgacttca atccgctcaa catcaatccg
     1381 ctgaaggatt tgatcgaacg ctttgttgat ttcaacgccg tacgcgcctg caaggatctg
     1441 caattgttcg tctctgccac caatgtaagg agcggacagc tccatgtgtt caggcgcgag
     1501 gaaatgagtg cggacatgat cgttgcctcg gcctgcctgc cgcatctgtt tcgcgctgtc
     1561 gagatcgacg gagacc
//
LOCUS       DATDHO010000161         2505 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_7317, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000161 DATDHO010000000
VERSION     DATDHO010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7317"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VIY07_03085"
     CDS             complement(<1..452)
                     /locus_tag="VIY07_03085"
                     /inference="COORDINATES: protein motif:HMM:NF012354.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY6380769.1"
                     /translation="MELRHLRYFVAVAEKLHFSRAAEELNISTPTLSHQIQALERMLG
                     AQLLSRKKKSAVALTHTGKRFLEEARATLRQAENAELVGKRAARGDIGTVAVGYILSA
                     SCIGLLPDLIGSFRKANPNASLQIVRMETFPAMKALIDGILDVVFIRAP"
     gene            570..965
                     /locus_tag="VIY07_03090"
     CDS             570..965
                     /locus_tag="VIY07_03090"
                     /inference="COORDINATES: protein motif:HMM:NF012725.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6380770.1"
                     /translation="MPIVTRLRTVCMAIAATTMSAAAQMSSHWQFCTGNPGIDWDTQI
                     KSCTALIQSGAEAKENAAIAFYNRAVAHENKDRYDLAIADYSEAIRLNPNDADFYFYR
                     GLDRQRMGDKAGAEADMAEAKRLNPNIGK"
     gene            complement(1128..1898)
                     /locus_tag="VIY07_03095"
     CDS             complement(1128..1898)
                     /locus_tag="VIY07_03095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380771.1"
                     /translation="MRNPFQLVLSVRFLVTVSLVAIPLGLMGAPAAAQDPVAPAPSSP
                     ESVPPKPTHAYKPYFVEFRARSAASYGHIYVLYGQVNGQGDIIKSDIAGLHPKGDAND
                     CENCSLIPWTVGHVLFVPADTGASDGDLEEKYVTGRYRVMLDAAAFKKVAAYIKQKKD
                     EKPMWNAIVSNCVTFVNDIAGYMGLKTPGAANLLKPEVYVSDLREMNGGKPQKALRFA
                     APSAAKPAGAPPQSAPKKKDPVANLVPSPAVEVSGATR"
     gene            complement(2308..>2505)
                     /locus_tag="VIY07_03100"
     CDS             complement(2308..>2505)
                     /locus_tag="VIY07_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380772.1"
                     /translation="ILSLMTLPASAYWQFIERPPGAEVKPSPRYSTKKQCEDALKKAE
                     AALKKAYPDRFPLVGSCEEFR"
BASE COUNT          540 a          738 c          698 g          529 t
ORIGIN      
        1 ggggccctga tgaataccac atcgagaatt ccgtcgatca acgccttcat cgccgggaac
       61 gtttccatcc gcacaatctg cagcgaggca ttcgggtttg ccttgcggaa acttccaatc
      121 aggtcgggta gcagtcctat gcaactcgcc gataatatgt agccgaccgc gacggttccg
      181 atgtcgccac gcgcggcacg ttttccgacg agttccgcat tttccgcctg tctcagcgtt
      241 gccctcgctt cctcgagaaa tcgcttgcct gtatgcgtca gcgctacggc gctcttcttt
      301 ttcctagaaa gaagttgcgc gcccagcatg cgctccaaag cttgaatctg gtggctgagt
      361 gtcggcgttg aaatattgag ttcttcggcc gcacgcgaga agtgcaattt ttcggcgacc
      421 gccacgaagt atcgaagatg gcgcaattcc atggtgtcaa atgccgtcag cgcaggagca
      481 tgaccagacc gtcacgagcg tacctgtgat gcgctcggga aaacagatat gttatcgaac
      541 tttgtcggct tgctgaaaag gagagcctcg tgccaattgt gacgcgtctg cgcacggtct
      601 gcatggcgat tgcggcaacg acaatgtccg ctgcggcaca gatgtcttcg cactggcaat
      661 tctgcacagg aaatccggga atcgattggg atacgcaaat caaaagctgc accgcgctca
      721 tccagtcggg cgccgaagcg aaagagaatg cggcgatcgc tttctacaat cgtgccgtcg
      781 ctcacgaaaa caaggacaga tacgaccttg cgattgcgga ttacagcgaa gcaatccggc
      841 tgaacccgaa cgatgcagat ttttattttt atcgcggcct agacaggcag cggatgggcg
      901 acaaggccgg ggccgaggcc gacatggccg aggcgaagcg actcaatccg aacatcggca
      961 aatgacctga gcggcggaga gcggccgctc aattccgtgc gtatttgaat tgggaactgg
     1021 aatcagcgcg tgttcgatgg cacgtccctc tcccgctcgg attcccgctt tcgcgggaat
     1081 gaacggaaga aaatcacctt cgtgattcaa tctgatcgaa tccgggtcta gcgcgtcgcg
     1141 ccagagactt cgacggccgg tgacggcacc aaattcgcga ccgggtcttt cttcttcggt
     1201 gcggattgcg gcggcgctcc cgccggcttc gccgcgctcg gcgcggcaaa cctgagagcc
     1261 ttttgcggct tgccgccatt catctcacga aggtcgctga cgtatacctc gggtttcagc
     1321 aaattggctg ccccaggagt cttcagcccc atgtagccgg caatatcatt tacgaaggtc
     1381 acgcagttgc tgacgatcgc gttccacatc ggcttctcgt cttttttctg cttgatgtag
     1441 gcagcaacct ttttgaacgc agcagcgtcc aacatgacac ggtagcggcc ggttacatat
     1501 ttttcctcga gatcgccgtc actcgctccg gtgtccgccg gcacaaacag aacgtgcccc
     1561 accgtccacg gaatgagact gcaattttcg cagtcgttgg catcgccttt cggatgcagc
     1621 ccggcgatat cactctttat gatgtcgccc tgaccattca cctgcccgta cagcacgtag
     1681 atgtggccat agctcgcggc ggatcgcgcg cggaattcaa cgaaatacgg cttgtaggcg
     1741 tgggtcggtt tcggaggcac agactccggg gagcttggag ccggggcgac cgggtcctgt
     1801 gcagcagcag gcgcgcccat caacccgagg gggatggcga ccaaactcac agttacgagg
     1861 aaacgaacgc tgaggaccaa ctgaaaaggg ttacgcatgt cagcctttct gccggcaact
     1921 atgccgtttt aggcgcacag aacaaccgaa ccccccgttg gaatagcgtc cgaattcgcg
     1981 acccaacgtc cccaaaaagg tcggcaagaa cgccgacccc cgaacgatta gtgcgcgtct
     2041 aaggcttagc cgcgggtctg aacaaccggg gccttacctt tacccaccgg agccttccct
     2101 tttccccagc aacccgcgag gccgaaggcg aggacggccg agcatagaac gactaggaac
     2161 tttttcataa cgctccccag ttatttgcgc tgtagacttg taaatcacta tcgccgtccg
     2221 agatttgcgg ctagtgcgga aaagtcacac tccccaataa tcggcgagat gtcccgccaa
     2281 tacgcccaaa cgggagcagg tccgacctca gcggaattct tcgcagcttc cgaccagtgg
     2341 aaaacggtcc gggtaagcct tcttcaaggc cgcctcggcc ttcttgaggg cgtcctcgca
     2401 ttgttttttg gtgctgtatc gaggtgacgg tttcacctcg gccccgggcg gcctttctat
     2461 gaactgccaa tacgccgagg cgggcaatgt catcagcgac aaaat
//
LOCUS       DATDHO010000162         2270 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_403991, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000162 DATDHO010000000
VERSION     DATDHO010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_403991"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..481
                     /locus_tag="VIY07_03105"
     CDS             <1..481
                     /locus_tag="VIY07_03105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY6380773.1"
                     /translation="GIDLGGVQWVTFEDGHVAEARDPPGVIRARADQDITAMLIAGEL
                     DAAIYGAVLPKDPRLQSVIKDPEAEAKSWYAKHGLVPVNHMVVVTYELARSNPQAVGE
                     LYRLLEEGKKAAPAGGVDTAPFGKEANRRCLDLLLSYCTQQKLISQRLKFDELWSQQ"
     gene            498..851
                     /locus_tag="VIY07_03110"
     CDS             498..851
                     /locus_tag="VIY07_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY6380774.1"
                     /translation="MKKIYTGGCQCGKVRYEAQAEIGEVITCNCSRCRKLGPLLSAVA
                     GSDFKLLSGENDMTDYQFNRGAIHHPFCKTCGIESYAYGKGPGGRDMVMLNVRCLDGV
                     DVEQLKLKKFDGASL"
     gene            complement(1181..1651)
                     /locus_tag="VIY07_03115"
     CDS             complement(1181..1651)
                     /locus_tag="VIY07_03115"
                     /inference="COORDINATES: protein motif:HMM:NF014376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6380775.1"
                     /translation="MKGKHSPPGAGNIYAKANEVIVKVTGGDTGQTFEVVEENCKPGF
                     QSRAHYHIKAYETFYVFEGSADFQVGDELFHAQKGSCVHIPPGVPHQVTSNEGVRMLM
                     IYSPAGTEGMFAAMHALSQEQLMNAELTRQLALKHDTVMIEQSKDGRGKGTILG"
     gene            1783..>2270
                     /locus_tag="VIY07_03120"
     CDS             1783..>2270
                     /locus_tag="VIY07_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY6380776.1"
                     /translation="MKPTSARERLDLALGRIDDPKGEGARACLTVYREQAKAAAGAAD
                     ARAKAGISLGPLDGTIVSIKDLFDVAGEVTRVGSRIFAEEGKPAAADAPAVHRLRAGG
                     AIIVAKTNMSEFAYTGVGANPHFGTPGNPADRKRVPGGSSSGAAVAAADGMCEIAIGT
                     DTG"
BASE COUNT          479 a          678 c          677 g          436 t
ORIGIN      
        1 cgggatcgat ctcggcgggg ttcagtgggt gacgttcgag gatggtcacg ttgcagaggc
       61 gagagatccg ccgggcgtaa tccgggcgcg tgccgatcag gacatcaccg ctatgctcat
      121 tgccggggag ctggatgccg cgatctatgg tgcggtgctg ccgaaggatc cgcgcctgca
      181 aagcgtcatc aaggatcccg aggccgaggc gaaatcctgg tatgccaagc atgggcttgt
      241 tccggtcaac catatggttg ttgtcaccta tgaactggcc cggtcaaatc cacaagcggt
      301 cggcgaactc tatcgtctgc tggaggaagg aaagaaggcg gcccctgctg gcggcgtcga
      361 tactgcgcca ttcggaaagg aagcaaaccg gcgctgcctc gacctgctgt tatcgtattg
      421 cacgcagcag aagctcatct cgcaacgact gaagttcgac gagctctgga gtcagcaata
      481 aaacgatgga gtgaacgatg aaaaaaatct acaccggcgg ctgccagtgc ggaaaagtcc
      541 gctacgaagc gcaagccgaa atcggcgaag tcataacctg caattgctcg cgctgccgca
      601 agcttggacc cttgttgtca gccgttgcag ggtccgattt caagcttctc tccggcgaga
      661 acgacatgac ggactaccag ttcaacaggg gcgcgattca tcacccgttc tgcaagacct
      721 gcggcatcga gtcttacgct tatggcaagg gcccgggtgg cagagacatg gtcatgctca
      781 atgtgcgctg ccttgacggc gttgacgtgg agcagttgaa gctgaagaaa tttgacggcg
      841 ccagtctgta gccgttgcgg cccgcaaaag cctgttccca aaagccataa cgggcagacc
      901 gtcgtccgcc cgtcacaagc tctcggatcc attcctgacg cacaggccga aacctgcggc
      961 acagatacca gttactgaga gccagggccg gcagtcatga gccacgaata ctgcaagcag
     1021 catccacgtc ccatgcccag tccggtcatg gcggccatcc gtgtccggca gagccgaaga
     1081 tgggtgacct gtccgaaagc gtacaactgt tgcttcgcaa ggcaagccct gagaatcgct
     1141 gttgataagt ctgaggatta aattttgacg cccgccgacg ctagcccagg atcgtgccct
     1201 tgccgcgacc gtccttgctt tgctcgatca tcaccgtgtc gtgcttgagt gcaagctgtc
     1261 gggtgagctc ggcattcatc aactgctctt gcgaaagcgc gtgcatggcc gcgaacatgc
     1321 cctccgtgcc tgcggggcta taaatcatca gcatccgcac gccttcgttc gaagtcacct
     1381 gatgcggcac gccgggcgga atgtgaacgc acgaaccttt ctgagcatgg aacagttcgt
     1441 cgccgacctg aaaatccgcg ctgccctcga aaacgtaaaa tgtctcgtat gccttgatgt
     1501 ggtaatgcgc gcgcgactga aatcccggct tgcaattctc ttccaccact tcgaacgtct
     1561 ggccagtgtc accgccggtg accttgacga taacctcgtt ggccttggcg taaatgtttc
     1621 ccgcgcccgg cggcgaatgc ttgcccttca tgctttcctc catctcatcg tgttccccca
     1681 tgacgtcgct ctttctcaat agagagccgc gcaagtgggc tggacgccgg acaaaaatag
     1741 cacgacattc gacgcaacgg ccatgcgatc aaggaaccac cgatgaaacc cacatctgcc
     1801 cgcgagcggc tcgacctcgc gctgggccgc atcgacgatc caaaaggcga gggcgcccgg
     1861 gcttgcctca cggtttaccg cgagcaggca aaggccgccg ccggtgctgc cgacgcgcgc
     1921 gcgaaagcag gaatttcgct ggggccgctc gatggaacga tcgtcagcat caaggatctg
     1981 ttcgatgttg ccggcgaagt gacgcgcgtt ggctccagaa tttttgccga agaaggcaaa
     2041 ccggcggcgg ccgatgcgcc cgcggtgcat cgcttgcgcg cgggcggcgc aattatcgtc
     2101 gcaaagacga acatgagcga atttgcttac acaggcgtgg gggctaatcc gcacttcggc
     2161 acgccaggca atccggctga tcgcaagcgt gtgcccggcg gctcatcatc gggcgctgcc
     2221 gtcgcggctg ccgacggcat gtgcgagatt gcgatcggca ccgacaccgg
//
LOCUS       DATDHO010000163         6442 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_304833, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000163 DATDHO010000000
VERSION     DATDHO010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6442
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304833"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VIY07_03125"
     CDS             complement(<1..342)
                     /locus_tag="VIY07_03125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6380777.1"
                     /translation="MKLLILVVDDEPDVEMLFRQHFRRDLRAERFAMEFAQSGDKALQ
                     RIADAAGVSLILILSDINMPGMSGLELLPKAKTIRPDVPIIIITAYGDADTKRKALEG
                     GADALFTKPIDF"
     gene            complement(339..3008)
                     /locus_tag="VIY07_03130"
     CDS             complement(339..3008)
                     /locus_tag="VIY07_03130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6380778.1"
                     /translation="MASRLLLAFLGISALAMVGAGVAIFSFREIGEVLDRITARRVPA
                     ALASQEVSRQAERIISAAPALLSAATPTEHAQHSRNITTEMDALYARLDQLEGGGAES
                     VALGSMRLAVNRLWTNLKALDKLVADRIVLSDRKRDQLRNALAVQSEAQSLLTPWLQI
                     VDGEIAQSRRAIGDQAQKPEERTAAGSRLLDSTEAYHALQRVQFLITSVNDRLQQIAT
                     TEDADGLRVQVFRIHQALNEARQTTANLDSRLRPLLLAKLDEFQKLATGSDSIPDLRQ
                     QELSIVALATRHLNDNSVLSTDLTQAVDRLVSSAKRDISEANADALSVQKFSATVLIA
                     AVALSLISSILIGWLYVGRNIVSRLTALSRSMLAIAEGNLRATVPTRGSDEIADMGRV
                     VEVLRQNTLERDELLVERAHAADRLEKQVEERTAELARSVEELRALGEVSQAVNSTLD
                     LETVLATIIAKAVQLSGTDAGTIFVFDEASQEFQVRASFGMPEELVEALKQRHIRVGE
                     TMVSAVTVERRPMQVADVQNEDSSLVLDVILRAGFRALLTIPLLGADRTIGALVVRRK
                     EPGEFPKRIVDLLQTFAAQSVLAIGNARLFDEVQSRTRELARSLESLQTAQDRLVQTE
                     KLASLGQLTAGIAHEIKNPLNFVNNFSAISTELIDELQQLLADAHIDDKLSASIREIA
                     QTLQDNLDKVVQHGKRADSIVKNMLLHSRQGSGERQPVDVNAIVEESLNLAYHGARAE
                     KQGFNITFDRSLDPTAGEADLFPQEITRVLLNLISNGFYAVTKRKSETDGADYEPTLA
                     AATKNLGDSVEIRIRDNGTGIPPEVKEKIFNPFFTTKPAGEGTGLGLSISYDIIVKQH
                     GGSIDVDTQAGKFTEFTIVLPRGLQFVRTGRRP"
     gene            complement(3175..4269)
                     /locus_tag="VIY07_03135"
     CDS             complement(3175..4269)
                     /locus_tag="VIY07_03135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY6380779.1"
                     /translation="MKRRQFIAGATVGVAALASTFPKPAIAQGVRELKMITTWPKTLP
                     GLQSAAERAAQSITALSGGRLNVKVFAAGELVGAMESFDAAGSGLADMYHSSEITWSG
                     KSPTFAFFCNVPFGFTANEINAWIYHGGGQALWDELSAGFGLKPFMCGNTGPQMGGWF
                     TKEITGVESYKGLRYRMPGVGGEVLRRLGAVVVTLPAGEIIPSLRSGAIDASEFAGPW
                     VDMALGLQKAAKYYYYPGFHEPGAVLSLSVNKKLWDSLGPTERSIIETAAAAENDRSC
                     AEFTANDAIALQQIANDPAIEIRKLDDSVLQALGKLSGEVLAEVGRKDALSRKVYDSY
                     MKFRTASVRWGDISERAFLNARALPFPYGG"
     gene            complement(4640..5728)
                     /locus_tag="VIY07_03140"
     CDS             complement(4640..5728)
                     /locus_tag="VIY07_03140"
                     /inference="COORDINATES: protein motif:HMM:NF016983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjF family protein"
                     /protein_id="HEY6380780.1"
                     /translation="MTNRDSRIRPDETLRPQVVVVETPEMPHAGIEPSAPRIIATRQK
                     GRIVPAAPVEIQPAVPSRPRRYSLPVKLALTGLAVAFCGWLGVDLYLWIASAFEYSEG
                     LGWAATAAAAAGISAAIAIIVHEARSYLALKNVEINQQRLAMQRENTRASDVHETIRD
                     VIKEIPTDREGTTAIEAFQRKVQRHHSPAQQIELLSETVITPLDRRAEAIVRRASARA
                     FGITAISPAAAIDVLFFIACSIRMVREIAACYGHRPTALATAHLLRRLVVEAGKLGAV
                     DFAGVALTQHIGGAVLERVATSAAESMYAAQRMARLGLVTMGMCRPIPFRRDELPGIF
                     SSLIGNLLAQRPETGKNGEPTSIPDRRD"
     gene            complement(5725..>6442)
                     /locus_tag="VIY07_03145"
     CDS             complement(5725..>6442)
                     /locus_tag="VIY07_03145"
                     /inference="COORDINATES: protein motif:HMM:NF016224.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HEY6380781.1"
                     /translation="SYMWFAPLDIPDNLERIADGTLAAVMEQRFEAYKTEVVTPFYSQ
                     HFRNYSRQVVLVDVLGALLAGREVFEDTRNAIDAIMESFRYGHSGIISRLLQSARIEK
                     VLFAATKADHVPEVQRDHLAALLRNMVAIPALDVSSSNAMFDVAALASVISTEEDTQE
                     IDGHRVQVVVGKPVGSSTRAKFFVGNVPARPPRPEAWGKPFLNIPVFEPPVIDVSPID
                     GIPHINLDLALEYLIGDQLR"
BASE COUNT         1270 a         1951 c         1915 g         1306 t
ORIGIN      
        1 gaaatcgatg ggcttggtga aaagcgcgtc ggcgccgccc tccagtgcct tgcgcttggt
       61 gtcggcatcg ccgtacgcag tgattatgat aattggaacg tccggccgaa ttgtcttcgc
      121 tttgggcagt aattccaggc cgctcattcc cggcatgttg atgtcggata gaatcaggat
      181 gagcgacacg cccgccgcat cggcaatgcg ctgaagtgcc ttgtcaccgg attgggcgaa
      241 ttccatggca aatcgctccg cgcgcaggtc gcgccggaaa tgctggcgga agagcatctc
      301 gacgtccggc tcatcatcaa ccacaaggat aagaagcttc acgggcgccg tcctgttctg
      361 acaaattgga gtccgcgcgg aaggactatt gtaaattcag tgaattttcc ggcctgcgta
      421 tcgacgtcga tagatccgcc atgctgcttg acaatgatat cgtagctgat tgagagccca
      481 agtcccgtgc cttcgcctgc cggttttgtt gtgaagaacg gattgaatat cttttctttc
      541 acttcaggcg ggatacctgt gccgttgtcg cgtatcctga tctccacgct gtcgccaaga
      601 ttctttgtag cagcagcgag ggtgggttcg tagtcggctc cgtccgtttc cgactttcgc
      661 ttcgtcacag cgtagaaccc gtttgagatc aggttgagca gcacacgggt gatttcctgc
      721 ggaaatagat ccgcctcgcc agcagtcgga tcgagcgatc tatcgaaggt gatattgaag
      781 ccttgtttct cggcccgcgc gccgtgatag gcaagattaa ggctctcctc aacgatagca
      841 ttgacatcca ccggctgacg ttcccccgat ccctggcggg aatgaagcag catgttcttg
      901 acgattgaat cggcgcgctt gccgtgctgc accactttat cgagattgtc ctgcagcgtt
      961 tgcgcaatct cgcggatcga tgcgctcaat ttgtcgtcga tgtgagcgtc ggcaagtagc
     1021 tgttgcaatt cgtcaatgag ttcagtcgag atcgccgaaa aattgttgac gaaattgagt
     1081 gggttcttga tctcatgggc aatgcccgcc gtcagctggc ccaaggaagc cagtttctct
     1141 gtctggacaa gccggtcctg cgctgtctgc agactttcca gtgaccgcgc cagctccctc
     1201 gtgcgagact gcacctcgtc gaaaaggcgc gcattaccga tcgccagcac cgattgcgcc
     1261 gcgaaggtct gcagcaaatc gacaatcctc ttcggaaatt ccccgggctc cttgcggcgg
     1321 acaaccagcg ctccaatggt gcggtcggcg ccaagcagcg gaatcgtcaa caacgcccga
     1381 aatccggcgc gcaaaatgac gtcgaggacg agtgaagagt cttcattctg aacgtcggcg
     1441 acctgcatcg ggcggcgctc caccgtcacc gcactgacca ttgtctcgcc cacccgaatg
     1501 tgccgctgtt tgagggcctc aaccagctct tcgggcatgc cgaaactggc gcgcacctga
     1561 aattcctggc tcgcttcgtc gaacacgaag attgtgccgg catcggtgcc cgagagctgg
     1621 accgccttgg cgatgatcgt cgcaaggaca gtttccagat cgagcgttga attgacggcc
     1681 tggctcactt caccgagtgc gcgcaactcc tcaaccgacc gggccagttc tgccgtgcgc
     1741 tcttcaacct gcttctcaag gcgatcggcg gcatgcgccc gctcgaccag cagttcatcg
     1801 cgctccagcg tattctggcg caacacttcg acaacgcgtc ccatgtccgc gatctcgtcg
     1861 ctgccgcggg tcggcacggt tgcccggaga ttgccttcgg cgatcgccag catgcttcgg
     1921 ctgagcgcgg ttagccgcga tacgatgttg cgtcccacat aaagccagcc aatcaggatt
     1981 gagctgataa ggctgagcgc gactgctgca atcaaaacag tggcgctgaa cttttgaacc
     2041 gacaatgcat cggcattagc ctctgaaatg tcgcgcttgg cgctcgacac gagacgatca
     2101 acggcctggg tgaggtccgt cgatagaacg gagttgtcat tcagatggcg cgtagccagc
     2161 gccacaatgg agagctcctg ctggcgcaaa tcgggaatgc tgtcacttcc cgtcgcgagc
     2221 ttctggaatt catcgagttt ggcgagcagc agcggccgca atcgggaatc gagattggcg
     2281 gtcgtctgcc gggcttcgtt cagggcttga tggattcgaa acacctgcac ccgcaggccg
     2341 tcggcatcct cggttgtcgc gatctgctgc agtctgtcgt tcaccgacgt gatcagaaac
     2401 tgcacccgct gcaacgcatg ataggcctcg gtcgagtcca gcaatcgact gccggctgcc
     2461 gttcgttcct ccggcttctg cgcctgatcc ccgatcgcgc ggcgtgactg tgcgatctcg
     2521 ccgtcgacga tctgcagcca gggcgtcagc aggctttgag cttcggactg gaccgcgagc
     2581 gcgttgcgca gctggtcacg cttgcggtcg ctcagcacga tccgatctgc caccagcttg
     2641 tcgagcgcct taagattggt ccagagccga ttgaccgcga gtcgcatcga tccaagtgcg
     2701 acgctctcgg ctccgccacc ctcgagttga tccaatcgcg cataaagcgc gtccatctca
     2761 gtggtaatat ttcgcgaatg ctgggcgtgt tcggtcggcg ttgccgcgga aagcagggcc
     2821 ggcgcggctg agatgatgcg ctcggcctgc cgcgatactt cctgcgaggc gagagcggcc
     2881 gggacgcgcc gcgccgtgat gcgatcgagg acttcgccaa tttcgcggaa agagaaaatc
     2941 gcaacccctg caccgaccat ggcgagggcg ctgattccaa gaaaggccaa caacaaccgg
     3001 cttgccacgc ccaatcgcga cagtatccgc gaaggccccg cctggccagc aatggctgag
     3061 ggattaggac tcacaaggta ctgctccgca cgatcgcgac agtggcggca agcatcgccg
     3121 ctgacgcgcc tgtttcttcg gattgctggt tgcggctatg taccaaagcc ggcctcatcc
     3181 gccatatgga aaaggcagcg cgcgtgcatt gagaaacgcg cgctccgaaa tatctcccca
     3241 gcgaacgcta gctgtccgaa atttcatgta gctgtcgtaa actttacgcg acagcgcatc
     3301 ctttcggccg acttcggcga gaacctcgcc cgataatttg ccgagcgcct gcaggaccga
     3361 gtcatcaagc ttgcggatct cgatcgccgg atcattggca atttgctgga gcgcgatggc
     3421 atcgttagca gtgaactcgg cgcaggatcg gtcgttctcc gctgccgctg cggtttcgat
     3481 gatgctgcgc tcggtgggac cgagactgtc ccatagcttt ttattcacgg agagggagag
     3541 caccgccccc ggctcgtgaa agcccggata gtagtagtac ttcgcggcct tctgcagtcc
     3601 gagcgccatg tccacccacg gaccagcaaa ttcgctggcg tcgatcgcgc ccgaccggag
     3661 cgacggaatg atttcgcccg ccggaagagt aacgacgacc gcgccaagcc ggcgcagaac
     3721 ctcgccaccg acgccgggca tgcggtagcg caaccccttg taggattcga cgcccgtaat
     3781 ttccttggtg aaccagccgc ccatctgcgg accggtattg ccgcacatga acggcttgag
     3841 gccgaaaccg gcgctcaact catcccaaag cgcctgaccg ccgccgtgat agatccaggc
     3901 gttgatttcg ttagcggtga atccaaacgg cacgttacag aaaaaggcga acgtgggaga
     3961 cttgccggac caggtaattt ccgagctgtg gtacatgtcg gcaagaccgg atccggcggc
     4021 gtcgaaactc tccatggcac cgacgagttc accagctgcg aacaccttga cgttcagacg
     4081 tccgccggaa agtgcggtga tggattgcgc ggcccgctcc gctgccgatt gcagacccgg
     4141 caaggtcttc ggccaggttg tgatcatctt gagctcgcgc acgccttggg cgatggcggg
     4201 cttcggaaaa gttgaagcca gagccgcgac gccaacggtc gcacccgcaa tgaactgtcg
     4261 gcgtttcatg gttcgctccc tccgttggca gtcttgtctc tgcacgtctg cgagaggccg
     4321 caaaaaattc gaaacctaac cgaccattgt cgggcacatc agaccatgga gttggtgtcc
     4381 ttaagtcgac ccccgagcgc actgcggcgc cttgtgatcg tatttttttt ggcttcagcg
     4441 gttttccgcc cgaagcaatc aaaaatgcgg ctgtcgccgc agccgtgcaa tgaatgaccg
     4501 tattccaatg ctcccccaca agcgccggtt atatcggtct atttgaatag tctgcttggg
     4561 gccagaagcg gcgtcaagtt cgcttcactt gaacgggtca acagcgcaga tgccagtgct
     4621 ttgccgccga caacggacgt cagtccctgc gatcggggat agaagtcggt tcgccatttt
     4681 tgccggtctc cgggcgctgc gcgagcaagt tgccgatcaa cgatgagaag atgccgggga
     4741 gttcgtcccg gcgaaacggg atcggccggc acatacccat tgtcaccagg ccgagccgcg
     4801 ccatgcgttg cgcggcatac atcgactccg ccgcgctcgt cgccacgcgc tcgagaacag
     4861 cacctccgat gtgctgggtc agcgcaaccc cggcgaaatc cacggcgccg agcttcccag
     4921 cttcgaccac gagccgccgc agaagatggg cggtcgcgag agcggtcggc cggtggccgt
     4981 agcaagcggc gatctcgcgc accatccgaa tactgcatgc aataaagaac aggacatcga
     5041 ttgccgccgc ggggctgatg gcggttatgc cgaaggcacg cgcgctcgcc cgacgcacaa
     5101 tcgcctcggc acgcctgtcg agcggcgtga tgaccgtctc cgataacagc tcgatctgct
     5161 gtgcgggcga atgatggcgc tggaccttgc gctgaaatgc ctcgatcgcg gtcgttcctt
     5221 cgcggtccgt tggaatctcc ttaatcacgt cgcgaatcgt ttcatgcacg tccgatgcgc
     5281 gcgtattctc gcgctgcatg gccaaccgct gctggttgat ttcaacattc ttcagggcaa
     5341 ggtagctcct cgcctcgtgg acaataattg caatcgcagc ggagatgccg gctgctgcgg
     5401 ccgccgttgc cgcccaacca agcccttcgc tgtattcgaa ggccgatgcg atccagagat
     5461 agagatcgac gccgagccag ccgcagaagg caacagccag gcccgtcaag gcaagcttca
     5521 caggcaagct gtagcgccgt gggcgagatg gaacggcggg ctgaatttcg accggagcag
     5581 cagggacgat gcgacctttt tgcctggtcg cgatgatgcg gggcgcggat ggctcgatgc
     5641 ccgcgtgcgg catctcgggc gtctccacga ccacgacctg tggccgcagg gtttcgtcag
     5701 gccgaattct gctgtcccta ttagtcaccg caattgatct ccgatgagat attcgagcgc
     5761 aagatcgaga ttgatgtgcg ggatgccgtc gatcggcgac acgtcgataa ccggaggctc
     5821 gaataccgga atgttgagga acggcttgcc ccatgcctcc ggccggggcg gacgggcggg
     5881 cacgttgcca acaaagaatt tcgctctggt gctgctgccg accggcttgc cgacaacgac
     5941 ctggacccgg tgcccatcga tctcctgggt gtcctcttcc gtcgaaatga ccgaggcgag
     6001 tgccgccaca tcaaacatgg cgttgctgct gctgacatca agggcgggaa tagcaaccat
     6061 gttgcgcagc agcgcagcca gatggtcgcg ctgcacctcc ggaacgtggt cggccttggt
     6121 cgcagcgaac agcaccttct cgatgcgcgc gctttgcagc aaccgcgaga taattccgct
     6181 gtgcccatag cggaaacttt ccatgattgc gtcgattgcg ttgcgcgtgt cctcaaagac
     6241 ctcccgaccg gccaggagcg cgccaaggac atccacgagc acgacttgtc gcgagtagtt
     6301 gcggaaatgc tggctataga acggcgtaac cacttcggtc ttgtaggctt caaagcgctg
     6361 ttccatcacg gcggccagcg tgccatcggc gatgcgctcg agattgtccg ggatgtcgag
     6421 cggggcaaac cacatgtagg aa
//
LOCUS       DATDHO010000164         5859 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_452086, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000164 DATDHO010000000
VERSION     DATDHO010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5859
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_452086"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(64..1476)
                     /locus_tag="VIY07_03150"
     CDS             complement(64..1476)
                     /locus_tag="VIY07_03150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017992313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl transferase family protein"
                     /protein_id="HEY6380782.1"
                     /translation="MAYKNLEEAIQASGGDVVGIMRNSQIGAYVYPVVAPEFTNWRDE
                     QRAWAETCVLFDQTHHMVNLFVEGPDALKLLSHLATNSFKNFTVNKAKQFAPCNYSGQ
                     VIGDGILFYLGENSLVFVGRNPTANWIQYNAQAGKYDVKVEYDDRSPSRPMGKPVFRK
                     FYRYQIQGPNAESVIKKLSGGTFPDIKFFNMGHITIGGRKVRALRHGMAGAPGLEVWG
                     PYAEGDEIRAAILEAGKDSGIVQVGARAYATNTLESGWIPSPVPAVYSGEKMKPYRQW
                     LPGTSYEANASLGGSFVSKNIEDYYTTPYELGYDGFTKFDHGFIGKEALQAMQGKVHR
                     KKVTFAWNNDDVNKVMASMFSPPGDNYKFIDLPLSNYASSSFDSIVSGGKVVGASMFS
                     GYSFNERKMLSLGFVEEQYAKVGTKLTLVWGEEGGGTRKTTVERHKQTELRVEVGPTP
                     YGQQARETYHQGWRTTAAAG"
     gene            1639..2748
                     /locus_tag="VIY07_03155"
     CDS             1639..2748
                     /locus_tag="VIY07_03155"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEY6380783.1"
                     /translation="MAHLTPPFRADHVGSLLRSKPLQDARGKREKGAISGDQLKEVED
                     REIEKIIRKQEEIGLKLATDGEFRRAYWHFDFFSMLDGVELYELDHGIQFQGVQSKPQ
                     SIRVTGKIGFSNHPMVEHFKFLKAHTRVAPKMTIPSPSVMHFRLEPGAVAKSAYPDRD
                     AIFDDLAVAYQKAVRVFYDAGCRYLQWDDTAWAYLCSQEELKKAKERGLDVDHLQETY
                     VRCINKGLEAKPADMTITTHVCRGNFRSTFISSGGYEPVAENLLGKCNYDGYFLEYDT
                     DRAGGFEPLRFLPKGKKIVVLGLVTSKSGRLEPRADIEKRIEEATKYVAVEQLCLSPQ
                     CGFASTEEGNVLAEDEQWAKLRMIVELADKVWGKS"
     gene            2841..3953
                     /locus_tag="VIY07_03160"
     CDS             2841..3953
                     /locus_tag="VIY07_03160"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEY6380784.1"
                     /translation="MAPRTTPPFRADHVGSLLRTASLKEARTSTQKKETDGAALKAVE
                     DREIEKIVKKQEDVGLKLATDGEFRRSWWHFDFFRGLKGVEPITTATGIQFHGVETKH
                     EGIKISGKIDFDGHPQIEHFKFLKAHCRSTPKMCIPAPSTFHFRQGRALVSREVYPDL
                     DEFFADVAAAWRKAIRAFYDAGCRYLQLDDTAWAMMCDPKEREQSKGRGDDPDKLPAI
                     YAGVTNAALQGKPADMAITMHSCRGNFRSTWIAQGGYEFVAEHLLGNTNLDGYFLEYD
                     TERAGGFDPLRHFPKGKKQLVLGLVTSKSGRLEAKDDIKRRIDEATRYVALDQLCLSP
                     QCGFASTEEGNVLAEDEQWAKLRMIVELAEEVWGKN"
     gene            4047..5155
                     /locus_tag="VIY07_03165"
                     /pseudo
     CDS             4047..5155
                     /locus_tag="VIY07_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021559.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
     gene            5182..>5859
                     /locus_tag="VIY07_03170"
     CDS             5182..>5859
                     /locus_tag="VIY07_03170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEY6380785.1"
                     /translation="MSQRNKPPFRADHVGSLLRPAALKKAREQRARDEISPAQLKEIE
                     DREIERVIRKQEEVGLQAITDGEFRRSWWHLDFLWGLDGIERHVMDTGIAFTGVTTRN
                     EGLKVTGKIGFSGHPMLEHFKFVAAHAKRTPKITIPAPSAAYGRPVPTPIDRNVYPKL
                     DRFFDDLGQAYRKAVRAFADAGCRYLQLDEVFIAMLCDPKYRQTMKDRGDDPEKLGEL
                     YGDLINIA"
BASE COUNT         1259 a         1696 c         1750 g         1154 t
ORIGIN      
        1 caaaaggctg cggcgcactc ctgacaggag cgcgccgcac tcatggtgaa caacgcgctt
       61 tggtcagccc gcggcagctg tagtacgcca tccctggtga taggtctcgc gcgcctgctg
      121 accatagggg gtcgggccaa cctcgacccg taattcggtc tgtttgtggc gctcgacggt
      181 ggtctttctg gtgccgccgc cttcttcgcc ccagaccagc gtcagcttgg tgccgacctt
      241 ggcgtactgt tcctccacga agccgagcga cagcatcttg cgctcattga agctgtatcc
      301 ggagaacatc gacgcgccga caaccttgcc gccgctcacg atagagtcga atgaactcga
      361 agcatagttc gagagcggca ggtcgatgaa tttgtagttg tcgccgggcg gcgagaacat
      421 cgacgccatc accttgttca cgtcgtcatt gttccaggcg aacgtcacct ttttgcggtg
      481 aaccttgccc tgcatcgcct gcagcgcttc cttgccgatg aagccgtgat cgaacttggt
      541 gaagccgtcg taaccgagtt cgtagggcgt ggtgtaatag tcctcgatat ttttcgatac
      601 gaagctgccg ccaagcgagg cgttcgcttc gtagctggtg cccggcagcc attggcggta
      661 gggcttcatc ttctcgccgg aatagaccgc cggcaccggc gaggggatcc agcctgattc
      721 gagcgtgttg gtcgcgtaag cgcgcgcacc aacctgcacg atgcccgaat ccttgcccgc
      781 ttcgagaatg gcggcgcgaa tttcgtcgcc ttctgcatag ggaccccaga cctcgaggcc
      841 gggcgccccc gccatgccgt ggcgcagcgc gcgcaccttg cggcccccaa tggtgatatg
      901 gcccatgttg aaaaacttga tgtccgggaa tgtgccgccg ctcagtttct tgatgacact
      961 ctcggcgttc ggaccctgga tctggtagcg gtagaatttg cggaagaccg gcttgcccat
     1021 cggacgcgac ggcgaacggt catcgtattc gactttcacg tcatacttgc ccgcctgcgc
     1081 attgtattga atccagttag cggtcgggtt gcgaccgacg aagacgagcg aattttcgcc
     1141 gagataaaac aggatgccgt cgccgatcac ctggccgctg taattgcacg gcgcaaactg
     1201 tttcgccttg ttgacggtga agtttttgaa ggaattggtc gcaagatgcg acagcagctt
     1261 gagcgcatcg ggaccctcga caaacaggtt caccatgtga tgcgtctggt cgaacaacac
     1321 gcaggtctcg gcccaggcgc gctgctcatc gcgccagttg gtgaattcgg gtgcgacgac
     1381 cggatacacg taggcgccga tttgcgaatt gcgcattatt ccgacgacgt cgccgcctga
     1441 agcctggatt gcttcctcca gattcttgta agccatactg acgttcctct tttcagctaa
     1501 tcgacaattc tcagtcggcg gcacaatagc ccgacagctc agccatagaa aagagcggaa
     1561 aattgacgcg catgccgaga agtgatgtga atgcggccgc agaatttcgt cagtcaagaa
     1621 acgaacccga gtatgccgat ggcccacctg accccaccgt ttcgtgccga ccacgtgggc
     1681 agcctcctac gcagcaagcc tctgcaagat gcgcgtggca agcgcgagaa aggggccata
     1741 agcggtgatc aactcaagga ggtcgaagac cgcgaaatcg aaaagatcat caggaagcag
     1801 gaggaaatcg ggctcaagct cgcgaccgat ggcgagtttc gacgggctta ctggcacttc
     1861 gatttcttca gcatgctcga cggggtggag ctctacgagc tcgatcacgg catccagttt
     1921 cagggcgtcc agtccaagcc gcagagcatc cgcgtcacgg gcaagatcgg cttttccaat
     1981 caccccatgg tggaacattt caagttcctg aaggcgcaca ccagggtcgc tccgaagatg
     2041 acgatcccct cgccgagcgt gatgcatttc cggctcgagc ccggcgcggt agccaaatcc
     2101 gcctatcccg accgcgacgc catcttcgac gatctggcgg tggcctatca gaaggcggtg
     2161 cgggtcttct acgatgccgg ctgccgctat ctgcaatggg atgacacggc ttgggcctat
     2221 ctgtgctcgc aggaggaatt gaaaaaagcc aaggagcgcg gcctcgacgt cgatcacctg
     2281 caggaaacct acgtgcgctg catcaacaag gggctcgagg ccaagcccgc cgacatgaca
     2341 atcacgaccc atgtctgccg cggcaacttt cgttcgacct ttatttcttc cggcggttac
     2401 gagcccgttg cggaaaattt gctcgggaag tgcaactacg acggttactt cctcgaatac
     2461 gataccgatc gtgccggggg cttcgagccg ctgcgcttcc tgccgaaggg caaaaagatc
     2521 gtggtgctgg gtctcgttac ttctaagtcc ggaaggctgg agcctcgcgc tgatatcgaa
     2581 aagcgtatcg aggaggcgac caaatatgtc gcagtcgaac agctttgcct gtccccgcaa
     2641 tgcggcttcg cgtccaccga ggaaggcaac gtgcttgccg aggacgagca gtgggccaag
     2701 ctgcgcatga tcgtcgagtt ggcggacaag gtttggggga aaagctagct aaacgatcga
     2761 agctgagtcg agtcgcgagg aacccgcttt cgcagggata ccgcttcgcg caattgttcg
     2821 agtgaggaaa cgaaacaatc atggccccac gtaccacgcc gcccttccgg gccgaccatg
     2881 tcggcagcct gctgcgcacc gcgtccctga aagaggcgcg gacaagtacg caaaagaaag
     2941 agaccgatgg tgcggcattg aaagcggttg aagaccgcga gattgagaaa atcgtcaaga
     3001 agcaggaaga cgtggggctg aaacttgcca ccgacggcga gtttcgccgc tcgtggtggc
     3061 atttcgattt cttccgtggg ctgaagggcg ttgagccgat taccaccgca accggcattc
     3121 agtttcacgg tgtcgagacc aagcatgaag gcatcaagat ctcgggcaaa atcgacttcg
     3181 acggccatcc gcagatcgag cacttcaagt tcttgaaggc acattgccgc tcaacaccga
     3241 aaatgtgcat tccggctccc agcacgtttc atttccggca gggccgggcg ctggtgagca
     3301 gggaggttta cccagacctc gacgagttct ttgccgatgt ggctgccgcc tggcgcaagg
     3361 cgatccgcgc tttttacgat gccggctgcc gctatctcca gctcgacgat accgcctggg
     3421 ccatgatgtg cgacccgaag gagcgcgagc aatccaaagg gcgcggcgac gatccggaca
     3481 aactaccggc gatctatgca ggcgtgacca acgcggcgct ccaaggaaag ccggccgaca
     3541 tggccatcac catgcattcc tgtcgcggca atttccgctc cacatggatc gcgcagggtg
     3601 gctacgaatt cgtggccgaa cacctgctcg ggaatacaaa ccttgatggc tatttcctgg
     3661 aatacgatac cgagcgggcc ggcggttttg accctttgcg ccattttccc aagggcaaga
     3721 agcagctcgt gctggggctc gtcacgtcga aatccggccg gctggaagcg aaagacgata
     3781 tcaagcgcag aatcgatgaa gccaccagat atgtcgccct cgatcagctt tgcctgtcgc
     3841 cgcaatgcgg attcgcgtcg accgaagaag gcaatgtgct tgcggaagac gagcagtggg
     3901 cgaaactgcg gatgatcgtt gagctggcgg aggaggtgtg gggaaagaac taacaagagc
     3961 cgttcattcc cgcgtacgcg ggaatccagg gtaattggac gctggatccc cgctttcgcg
     4021 ggggacgaac ggaggtgagt tgaatgatca aacatattaa gcctcccttc cgtgccgatc
     4081 atgtcggcag cctttgcgta ccaagcctct gaaagaagct cgtgccaggc gggaaagaaa
     4141 cgaaatctcc gccgatgaac tcagggcgat cgaggatcgc gagatcgcgg cgacaatcag
     4201 ccgacaggaa gacatcggac tgcgggccgt caccgacggt gaattccggc gcgcgttctg
     4261 gaactacgat tttctcggag cgctgcccgg ggtggaggct tacctcggcg agcggaagat
     4321 caagtttcag ggcgttaatc cgaagcccat gatgctgcga gtgaacggca agctgggcac
     4381 gttttccggc catccgatgc tcgagcattt tcgatttaca aaagctcatg cgcgggttct
     4441 gcctaaaatg acaatcccct cgccatcgtc gctgcatttt cgctatggcc gcgaagcggt
     4501 gccggactcg atctatcccg atatgcgcga gttctatcgc gatctcggcc agacctatcg
     4561 actggccgtc cgcgctttcg ccgacgcggg atgccgctat ctgcagctcg acgaagtgaa
     4621 cctcgcctat ctctgcgacc caagcctgcg cgcgcaagtg gccggccgtg gcgacgaccc
     4681 cgaaaaactc ccgatgatct atgccggcat gatcaatgcc gcgatctccg atgttcctcc
     4741 tgacatgaca atcgccatgc atctgtgccg cggcaatttt cagtcgacgt ttgtcgcatc
     4801 gggtggatac gagccggtcg ctgaggttct gttcaatgca atcaaggtgc acgcctattt
     4861 catggagtat gacagcgacc gtgccggcgg gttcgagccg ctgcgcttcg tgcccaaggg
     4921 caagacagtg gtgcttggac tcgtcacgtc gaaatcgggg cgccttgaat caagagacgt
     4981 tctcaagcgg cgtatcgatg cggccgcaaa gtatgtgccg ctggagcaac tgtgtctgtc
     5041 gccgcaatgc ggcttcgcct ccacggagga gggaaatctt ctcgcggagg aagagcagtg
     5101 ggagaagctg cggatgattg tggaactggc cgacgagatt tggggaacaa gctaacattg
     5161 aacggccgag gaggaagaag aatgtcacag cgcaataaac cgccattccg cgccgatcat
     5221 gtcggcagcc tgctgcggcc agcagcattg aagaaagcgc gcgagcagcg cgctcgggat
     5281 gaaatctccc ccgcgcagct aaaggagatc gaggaccgcg agatcgaacg cgtcatcagg
     5341 aaacaggaag aggtcggcct gcaagccatc accgatggcg aattccggcg ctcctggtgg
     5401 cacctggatt tcctctgggg tctcgacggc atcgagaggc acgtgatgga caccggtatc
     5461 gctttcacgg gcgtgacgac acgcaacgaa ggtctcaagg tcaccggcaa gatcggcttt
     5521 tccggccatc cgatgcttga gcatttcaag ttcgtcgccg cccacgccaa gcgcacgccg
     5581 aaaatcacga ttccggcgcc gtcggcggct tacggtcgac cggtaccgac gccgatcgac
     5641 cgcaatgtct atcccaagct tgatcgcttt ttcgatgatc tcggccaggc ctacaggaag
     5701 gcggtgcgtg ccttcgccga tgccggctgc cgatatctcc agctcgatga agtattcatc
     5761 gccatgcttt gcgatccaaa atatcggcag acgatgaaag accgtggcga tgatccggaa
     5821 aaacttggcg agctgtacgg cgatctcatc aacatcgcg
//
LOCUS       DATDHO010000165         1900 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_7504, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000165 DATDHO010000000
VERSION     DATDHO010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7504"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..307)
                     /locus_tag="VIY07_03175"
     CDS             complement(<1..307)
                     /locus_tag="VIY07_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliR"
                     /protein_id="HEY6380786.1"
                     /translation="MRVDISFLPALATAFLLTFARVGAMVMLLPGIGELSVPSRVRLA
                     IALVLTAILLPAHQKAYAVDLKTFGPVLVLLFQELMVGAVLGLTGRLAISALQITGSV
                     "
     gene            complement(321..584)
                     /gene="fliQ"
                     /locus_tag="VIY07_03180"
     CDS             complement(321..584)
                     /gene="fliQ"
                     /locus_tag="VIY07_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HEY6380787.1"
                     /translation="MTGPEVLDVSRDAIFTLIVVSSPVMLVGLAVGLAISLLQALTQI
                     QEMTLAFVPKILAIFISLLIALPFMAEKMHAEMLRIAARIVSG"
     gene            complement(597..923)
                     /gene="fliE"
                     /locus_tag="VIY07_03185"
     CDS             complement(597..923)
                     /gene="fliE"
                     /locus_tag="VIY07_03185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HEY6380788.1"
                     /translation="MATPFAAASAYASIARIATDPSSLAIARQPLKEAAGDASFASVL
                     KDAIGAVAEMGRKSDAQTRAAANGKANIVDVVTAVSETEVAIDAVVAVRDRVIQAYED
                     IMKMPI"
     gene            complement(939..1364)
                     /gene="flgC"
                     /locus_tag="VIY07_03190"
     CDS             complement(939..1364)
                     /gene="flgC"
                     /locus_tag="VIY07_03190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009425 - bacterial-type flagellum basal
                     body [Evidence IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HEY6380789.1"
                     /translation="MAMAALDFIKTLTIAASGLRAQAGRMRIISENIANADSTPQRPG
                     ADPYRRKIPTFRSELDRTLDTQLVELGKVQTDSSAFRIKYEPGHPSADSNGNVKYPNV
                     NALIEMTDMREAQRSYEANINVISATRRMIQRTIDILKA"
     gene            complement(1376..1786)
                     /gene="flgB"
                     /locus_tag="VIY07_03195"
     CDS             complement(1376..1786)
                     /gene="flgB"
                     /locus_tag="VIY07_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HEY6380790.1"
                     /translation="MAIADIPILSMLRARLDWSQARQRVLAENVANSDTPRFHARDLA
                     PLTFDESPLAASGGLTPVSLARTETGHIEGVGLSQSPFRNGSSRIFEVRPTGNAVNLE
                     EEMMKVAANQMDFQTATALYTRSLALIKTALGKR"
BASE COUNT          394 a          541 c          568 g          397 t
ORIGIN      
        1 cgaccgatcc cgtgatctgc agcgctgaaa tcgccaaccg cccggtaagg ccgaggaccg
       61 ctcccaccat caactcctga aacaaaagca ccagcaccgg tccaaaggtc ttgagatcga
      121 ctgcgtaggc cttctggtgc gcggggagca gtattgccgt cagcaccagc gctatcgcga
      181 gacgcacgcg cgaaggcacg cttagttcgc cgatgcccgg cagaagcatg accatggcgc
      241 ctacccgcgc aaaagtgaga agaaatgcgg tcgccagcgc cggcaggaat gaaatgtcga
      301 cgcgcatttt tttgctggcg ctagccgctg acgatccgtg ccgcgatccg caacatttcg
      361 gcgtgcattt tctcggccat gaaaggcaag gcgatgagca acgaaataaa gatcgccagt
      421 atcttcggta cgaaggcgag agtcatttcc tggatttgcg tcagagcttg cagcaatgaa
      481 atggcgagtc cgaccgcgag cccaaccagc atcaccgggc tggacacaac aatgagtgta
      541 aaaatcgcat cgcgtgacac atcgaggact tcgggaccgg tcatttgagt ctatccctag
      601 atcggcatct tcattatgtc ttcgtaggcc tggatgacgc gatctcgcac ggcaaccacc
      661 gcatcgatgg caacctccgt ctccgatacc gcggtcacga catcaacgat attggccttg
      721 ccgttcgccg ccgctcgagt ctgtgcatcc gatttgcggc ccatttcggc aaccgcaccg
      781 attgcgtctt tgagaaccga agcgaaactt gcatcgccgg ctgcctcctt gagcggctgt
      841 cgggcgatcg cgagcgaact gggatcggtt gcgatgcgcg caatgctggc ataggcgctg
      901 gcggcggcga agggagtggc catggttgat tacgcctttc aggctttgag aatgtctatg
      961 gtgcgctgga tcatgcgacg cgtggcgctg attacgttga tattggcttc ataggatcgc
     1021 tgggcttcgc gcatgtcggt catttcgatc agcgcgttca cgttcgggta tttgacattg
     1081 ccattgctgt ccgcagatgg gtggcccggc tcgtatttga tgcgaaacgc ggagctgtcc
     1141 gtctgaacct ttccaagttc gaccaattgc gtatccagag ttcgatcaag ttcgctgcga
     1201 aacgtcggga tcttgcgcct gtacggatcg gcgcccggcc gctgaggcgt ggaatcggca
     1261 ttggcgatgt tttcggaaat gatgcgcatg cgcccggcct gagcacgcaa tccggaggct
     1321 gcgatcgtca gagtcttaat gaagtcgagt gctgccatcg ccagccccaa tgcgatcagc
     1381 gcttgccgag cgccgttttg attagagcaa gactccgtgt gtagagcgct gtcgccgtct
     1441 gaaagtccat ctggttggcg gcgactttca tcatctcttc ctcgaggttc acggcgttgc
     1501 cggtcggccg cacctcgaaa atgcgcgagc ttccgtttcg gaatggcgac tggctcaaac
     1561 cgactccttc gatgtgaccg gtttccgtac gcgcaagtga aacaggggtg aggccgccgg
     1621 atgcagcgag cggcgactcg tcgaacgtca gcggagcgag atcgcgcgca tggaaacgag
     1681 gcgtgtcgga attggctacg ttttcagcca atacgcgctg tcgcgcctgc gaccaatcaa
     1741 ggcgtgcgcg caacatggac agtattggaa tgtcagcaat ggccatcgcc agccccccag
     1801 acggcgtctc cccaactccc ccaccaggca gactttgccg gggttatggt taatggctgg
     1861 taaaaaggtg gtggcggaac aagttacctt tggacaaaag
//
LOCUS       DATDHO010000166         4450 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_7543, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000166 DATDHO010000000
VERSION     DATDHO010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4450
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_7543"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..528)
                     /locus_tag="VIY07_03200"
     CDS             complement(<1..528)
                     /locus_tag="VIY07_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HEY6380791.1"
                     /translation="MSTRPTDKLAIAVAQLNSTVGDIAGNVEKVKRARSASLGADLVV
                     FPELFIAGYPPEDLVLKPAFQAACRAAMEALARETKSGPALLVGAPWLDGDRLYNAVA
                     LLDGGTIAAVRYKVDLPNYGVFDEKRVFAPGPMPGPVNFRGVRLGLPICEDIWGAEVV
                     ECLAETGAEMLIVPNG"
     gene            complement(666..1832)
                     /locus_tag="VIY07_03205"
     CDS             complement(666..1832)
                     /locus_tag="VIY07_03205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008142769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HEY6380792.1"
                     /translation="MKIRNWRSACFCFALAALPLFSISAAAQILVSANDNKAVLVNGV
                     NVVPDNPAVDTVSIIDLGVSPPKLIGEVKAPASVVGPPQSVAVSGDESFALVTGAFKV
                     DSADPKKAVPDNKLSVIDLKAKPPAVIDTLEAGLGAAGVSINNAGTLALVANRSEGTV
                     SAFTIAGNKLTPAGKIQLGDSKSGPSHVAFTPDGKTALVTRDGDHRVSILSVDGNKVE
                     DSKKFMVGGVRPYSMEISSTGDVAVFSNQGGGQGDIDVINVIDLKAKPPRIVDTISVG
                     QTPEGIGMSADGKYVAVTVMNGSNRAKDHPAFNDFGLLQIYSVNGTTLTKVAETKVGH
                     WCQGAAFSKDNKTVVIQCMVEKNLQAFDFDGRALKPAGTVPLGGGGAGLRTAAK"
     gene            complement(1936..3324)
                     /locus_tag="VIY07_03210"
     CDS             complement(1936..3324)
                     /locus_tag="VIY07_03210"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HEY6380793.1"
                     /translation="MAERWTPDSWRNKPIEQVPDYPDRQALLDVEKQLATFPPLVFAG
                     EARNLKKQLGRVAKGEAFLLQGGDCAESFAEHGANNIRDFFRMFLQMAVVLTYAAASP
                     VVKVGRIAGQFAKPRSSPNEKRDGKELPSYRGDIINDIAFTEEARRPDPRRQIEAYRQ
                     SAATLNLLRAFAQGGYANLGSVRQWMLGFVKDSPQSRRYVELSDRISQALGFMQACGL
                     DLESHPELRTTDFYTSHEALLLGFEEALTRVDSTTGDWYATSGHMLWIGDRTRQHDHA
                     HVEFARGIKNPIGLKCGPSLKADDLLRLIDSLNPDNEAGRLTLIGRFGGERVGEHLPG
                     LVRAVKREGRIVVWSCDPMHGNTITSATGYKTRPFDLILREVRSFFEVHQAEGTYAGG
                     VHLEMTGQNVTECTGGARAITEADLNDRYHTVCDPRLNAEQAIDLAFLLAELLKKERS
                     AQAFPIPAAAAL"
     gene            complement(3412..>4450)
                     /locus_tag="VIY07_03215"
     CDS             complement(3412..>4450)
                     /locus_tag="VIY07_03215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6380794.1"
                     /translation="VLEDAHTVRLATGARVRAQTILIATGARPHHGTPIAGENYVISS
                     NEAFHLEKLPKRILIQGGGYIAVEFAGIFNGLGCDVTLVYRGEKILRGFDEDVREHLM
                     RELGLRGVRILTRKIVKAVEKVDHGFDVCLSDNEQIIVDLAMFATGRRPNTDGLGLKN
                     VGVKISERNAIMVDTYSRTSVPNIYAVGDVTDRVNLTPVAIREGHAFADTIFGGKPTA
                     VDHTKVPTAVFSEPEVGVIGLTEKQAIEQFEKIDVYKTSFRPMKATLSGRDTRVFMKL
                     VVDSNTDKILGCHIVGPDAAELIQVVGIAVTMGATKADFDATMAVHPTAAEELVTMRE
                     KAMSYGRAAAE"
BASE COUNT          882 a         1360 c         1249 g          959 t
ORIGIN      
        1 cccgttgggt acgatgagca tttcggcgcc ggtctcagcc agacactcga caacctcggc
       61 accccatatg tcttcgcaga tcggaagtcc taaacgcacg ccacggaaat tgaccggccc
      121 gggcatgggg ccgggcgcaa acacgcgctt ttcgtcgaac acaccgtagt tgggaaggtc
      181 gaccttgtaa cgcaccgcag cgattgttcc gccgtcgagc aatgccaccg cgttgtaaag
      241 cctatcgcca tcgagccatg gcgcgccgac caacagcgcc ggccctgatt tggtttcgcg
      301 cgcaagcgcc tccatcgccg cacggcacgc tgcctgaaat gccggcttga gcaccagatc
      361 ctcaggcggg tagccggcga taaacaattc cggaaaaacg acgaggtcag caccaagtga
      421 cgccgagcga gcgcgcttca ccttttcgac attgcccgca atgtcgccca cggtcgaatt
      481 cagttgcgca accgcaatcg caagtttgtc cgtcgggcga gtgctcatgg caagacctct
      541 accgcctcgt cggcctgtcc ggcaatgggt aggtctgcaa ggctgccccg acgtaacggt
      601 tagcgtcgcg gtcagacgcc gggtgaagcg atccggcgtc tgcccgaatg tttagtagta
      661 cttgcctatt tcgccgccgt gcgcagtccc gccccgccgc cgccgagcgg taccgtgccg
      721 gccggcttca gagcgcgtcc gtcgaagtca aaggcctgaa ggttcttctc gaccatacat
      781 tggatcacaa cagtcttgtt gtctttgctg aaggccgcgc cctggcacca gtgtcccacc
      841 ttggtttccg cgactttcgt cagggtcgtg ccattgaccg aatagatttg cagcagaccg
      901 aagtcgttga acgcagggtg gtccttcgct ctgtttgatc cattcatgac ggtgacggcg
      961 acatacttgc cgtcggcgga catcccgatg ccctccggcg tctggccgac gctgattgta
     1021 tcgacgatgc gcgggggctt cgcctttaga tcgatgacgt tgatgacatc aatgtcacct
     1081 tggccgccgc cctgattgct gaacactgcg acatcgcccg tggaactaat ctccatgctg
     1141 taaggccgaa cgccgccaac cataaatttc ttgctgtcct caaccttgtt gccgtcgacc
     1201 gaaagtatcg agaccctgtg atcgccgtcg cgagtcacga gtgcagtctt gccatcgggc
     1261 gtgaatgcaa catgactggg cccggacttc gagtcgccca attgaatctt gccagctgga
     1321 gtgagcttgt tgcctgcaat cgtgaaagca gacaccgtac cttcgctgcg attggccacc
     1381 agtgccaaag tgcccgcatt gttgatcgac acaccggctg cgccgaggcc ggcttcgaga
     1441 gtatcgatga ccgccggggg ctttgcctta agatcgatca ccgaaagctt gttgtctgga
     1501 acagcctttt ttggatcggc ggagtccact ttgaaggctc cggtcacgag cgcgaagctt
     1561 tcatcacctg ataccgcgac actctgcggc ggcccaacaa cgcttgccgg cgctttcact
     1621 tcgcctatca actttggagg cgagacacca agatctatga tgctgacggt atcgaccgcg
     1681 ggattgtcgg gcacaacatt cacgccgtta acgagcaccg ctttgttgtc gttcgccgag
     1741 acgagaatct gggccgcggc gctaatactg aacaatggta gcgcggccag agcgaagcaa
     1801 aagcacgccg accgccaatt gcggattttc atgacgcctc ccccgctcgg ctgattgttg
     1861 cggaacagac gccgcgccga gccacggcac ccattccgcg aagactaaca ccatatgggg
     1921 aacaatgctt cccgcttata gcgcggccgc cgcggggatc gggaacgctt gcgccgatcg
     1981 ctctttcttc agcagctcgg ccaacaggaa agccagatcg attgcctgtt cggcattcag
     2041 ccgcggatcg cagaccgtgt gataacgatc gttgaggtcg gcttccgtga tagcgcgcgc
     2101 cccaccagtg cattcggtaa cgttttgtcc tgtcatttcc agatgcacgc cgccggcata
     2161 ggtcccttcg gcctggtgaa cctcgaagaa gctacgaacc tccctcaaaa tcaggtcgaa
     2221 aggcctggtc ttgtagccag tggccgaagt tatggtgttg ccatgcatcg gatcgcacga
     2281 ccacaccaca atcctgccct cgcgcttgac ggctcgcaca aggccgggga gatgctcgcc
     2341 gactctttcg ccgccgaaac gtccgatcaa tgtcagacgg ccggcttcat tgtcaggatt
     2401 aagactatcg atcaggcgca acagatcgtc ggccttaagt gacggtccac atttgaggcc
     2461 tatcggattc ttgatgccgc gcgcaaattc gacgtgcgcg tgatcatgtt gccgcgtgcg
     2521 atcgccaatc cacagcatgt gaccggacgt ggcgtaccaa tccccagtcg tcgaatcgac
     2581 tcgcgtcaac gcctcttcga agccaaggag aagcgcctcg tgactcgtat agaagtctgt
     2641 cgttcggagc tccggatggc tttcaagatc gagaccgcag gcctgcatga agccaagcgc
     2701 ctgcgatatg cgatccgaaa gttcgacgta gcgcctggac tgcgggctgt cctttacaaa
     2761 gccgagcatc cactggcgca cgctgccgag attggcatag ccgccttgcg caaatgcgcg
     2821 cagcagattg agcgtcgccg ctgattggcg ataggcttcg atctgccgac gcggatcggg
     2881 ccggcgcgct tcctcggtaa aagcgatgtc attgatgatg tcgccgcgat agctcggcaa
     2941 ctccttgccg tctcgcttct catttggcga ggaacgtggc ttggcgaatt gcccagcgat
     3001 gcgaccaacc ttcactaccg gcgaagccgc agcataggtc aacacgacgg ccatctggag
     3061 gaacatccgg aaaaagtcgc ggatgttatt ggcgccgtgt tcggcaaaac tttccgcgca
     3121 gtcgccgcct tgcagcagga aagcctcgcc cttggcaaca cgtcccagct gttttttcag
     3181 attgcgggct tctccggcaa acaccaaggg cggaaacgtc gcgagttgct tctcgacatc
     3241 aagcagggcc tgccggtccg gatagtccgg gacctgctcg ataggcttgt tgcgccaact
     3301 atcgggcgtc caacgttccg ccattacgca ctactccgct tgtgggcggc cttatacacg
     3361 accgtgggcc ggcgaggcca gtttttccag caatttcggt tagttttggc cttactctgc
     3421 ggccgcccgc ccgtagctca tggctttttc gcgcatcgtg actagttctt cggcggcggt
     3481 ggggtgaaca gccatcgtcg catcgaaatc ggctttggtc gcacccattg ttaccgcgat
     3541 tcccaccacc tggattagtt cagcggcatc gggaccaaca atatggcagc ccaagatctt
     3601 gtcggtgttg ctatcgacga caagcttcat gaacactcgt gtgtcgcgcc cggacagcgt
     3661 cgccttcata gggcgaaagc tggtcttata gacgtcgatc ttttcgaatt gctcgatcgc
     3721 ctgtttttcg gtgagtccga tgacgcccac ctcgggctcg gaaaagaccg ccgtaggaac
     3781 tttcgtgtga tccactgcgg tcggcttgcc gccgaagatg gtgtccgcaa aagcatggcc
     3841 ttcgcgaatt gcgaccggcg tcagattgac ccgatcggtg acgtcaccca cggcatagat
     3901 gttcggaacc gacgttctcg aataggtgtc taccattatg gcgtttcgtt ccgagatctt
     3961 tacgccgacg ttcttcagcc caagcccgtc ggtattcggc cgtcgtccgg ttgcgaacat
     4021 tgcgagatca actatgattt gctcgttgtc ggaaaggcaa acatcgaaac cgtgatcaac
     4081 cttctcgact gccttcacga tcttgcgagt cagaatccgg acgccgcgta gtcccagttc
     4141 gcgcatcaga tgctctcgca cgtcttcatc gaatccgcgc aggatcttct cgccgcgata
     4201 gacaagggtt acgtcacaac ccaggccgtt gaagattccg gcaaattcca ccgcaatgta
     4261 accgccgcct tgaatcaaaa tgcgcttcgg caacttttcc agatggaatg cttcgtttga
     4321 cgaaataacg tagttttctc cggcgatcgg cgttccgtgg tgcgggcgtg caccggtggc
     4381 aatgagaatt gtttgggccc gtacgcgtgc gcccgttgcc aggcgaaccg tgtgcgcgtc
     4441 ttcaagcacc
//
LOCUS       DATDHO010000167         1675 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_304958, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000167 DATDHO010000000
VERSION     DATDHO010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1675)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1675)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1675
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_304958"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VIY07_03220"
     CDS             complement(<1..214)
                     /locus_tag="VIY07_03220"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEY6380795.1"
                     /translation="MAENNNADVKKMPFERAIEELESIVKRLEEGKVPLEESVAIYER
                     GEALKARCDELLRQAEARVDRITLDAN"
     gene            complement(271..1200)
                     /locus_tag="VIY07_03225"
     CDS             complement(271..1200)
                     /locus_tag="VIY07_03225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEY6380796.1"
                     /translation="MSTLLLSHRACLNHLTPAGHPERPDRLRAIEQVLEDEKFQALAR
                     VEAPRGPVEIITLCHPMEYVEAIRDASPAEGLVRLDADTAMSPGSYEAALRAVGGAQL
                     AVDEVVAGKAANAFVATRPPGHHTETARPMGFCLFNNAAIAARYAQQTHGLERAAIVD
                     FDVHHGNGSQDIFWSDKSVMYCSTHEMPLYPGTGAVGERGEFNTIVNAPLSAGDGGDA
                     FREAFETAILPRLREFKPDILIISAGFDAHTRDPLANLNLVEADYSWVTKKLMEIADA
                     SAKGRVVSLLEGGYDLQGLSRSVAAHVTALMHG"
     gene            complement(1240..>1675)
                     /locus_tag="VIY07_03230"
     CDS             complement(1240..>1675)
                     /locus_tag="VIY07_03230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="short chain dehydrogenase"
                     /protein_id="HEY6380797.1"
                     /translation="LMLSPPLDMAEKWFAPHTAYSMAKFGMSLVVLGLAGELRGKIAV
                     NALWPRTTIATAAIRNLLGGDAMMLRSRKPAILAEAACRVFQKPKAFTGNFLIDDTFL
                     ASEGIRDFDQYRVDPSQPLQVDFFVPDTIPPPNGVSLDAKSR"
BASE COUNT          334 a          500 c          506 g          335 t
ORIGIN      
        1 cgttggcatc cagggtaatc ctgtctaccc gcgcttccgc ctgacgaagc aattcgtcgc
       61 atcgtgcctt aagcgcctcg ccgcgctcgt agatcgcaac cgactcctcg agcgggacct
      121 tgccttcttc caggcgcttg acgatcgatt ccaattcttc gatcgcccgt tcgaagggca
      181 ttttcttcac gtcggcatta ttgttctcgg ccatgtctgg atccggcgat tcgtgcgcac
      241 caggacggat tgcaagatag cgcttattct ctagccgtgc atcagcgctg tcacgtgggc
      301 ggcgacggac cgtgatagtc cctgcaagtc gtaaccgcct tcaagcaggg aaaccacacg
      361 ccccttggcg ctggcgtcgg caatctccat caactttttg gtgacccatg aatagtctgc
      421 ttcgacaaga ttcagatttg cgagcggatc gcgggtgtgc gcatcaaagc ccgctgaaat
      481 gatcagaatg tcgggcttga attcgcgcag gcgcggcaga attgccgttt cgaaagcttc
      541 gcggaaagcg tcgccgccgt cgcccgcgga gagaggcgca ttgacgatgg tgttgaattc
      601 accgcgctcg ccgaccgcgc ccgtgcccgg gtaaagcggc atctcgtggg tcgagcagta
      661 catcacgctc ttgtccgacc agaaaatatc ctgcgacccg ttgccatgat gcacgtcaaa
      721 gtcgacgatg gcggcgcgtt cgagaccgtg tgtctgctgc gcatagcgcg ccgcgatcgc
      781 ggcattgttg aaaagacaga agcccatcgg ccgcgccgtc tcggtgtggt gtcccggagg
      841 acgggtagca acaaaggcat tcgcggcctt gccggcaacg acctcgtcga ccgccagctg
      901 ggcgccgccg acagcgcgca gtgccgcctc gtagctaccg ggcgacatcg ccgtatcggc
      961 atcaagccgt accagaccct cagccggtga agcgtcgcga atggcttcga cgtactccat
     1021 cggatgacac aaggtgatga tctcgacagg cccgcgcgga gcttcgacgc gcgccagagc
     1081 ctgaaacttt tcgtcttcca atacctgttc gatcgcgcgc aaacggtccg ggcgctccgg
     1141 atgaccggcg ggcgttagat ggttcaggca ggcccggtga ctgaggagaa gggtagacat
     1201 catctagact taaacactca caagcgttcg tggaagtgcc taacgcgatt ttgcgtccag
     1261 actgacgcca ttcggcggtg gaatagtgtc tggcacgaag aagtccacct gcaacggctg
     1321 gcttgggtcg acgcggtatt gatcaaaatc acggatgcct tcgctggcga ggaatgtgtc
     1381 gtcaatcagg aagttccccg taaaagcctt gggtttctga aagacgcgac aggcggcctc
     1441 ggcgaggatt gcaggcttgc gcgagcgcag catcatcgcg tcgccgccaa gcaggttcct
     1501 gatcgccgcg gttgcgatcg tggtgcgcgg ccacaaagca ttgacggcga ttttcccgcg
     1561 cagctcgcct gcaagcccga gaacaacgag gctcatgccg aactttgcca tcgagtacgc
     1621 ggtatgcggt gcgaaccact tttcagccat gtcgagggga ggagacaaca tgagt
//
LOCUS       DATDHO010000168         3246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_156286, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000168 DATDHO010000000
VERSION     DATDHO010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3246
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156286"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            313..1728
                     /locus_tag="VIY07_03235"
     CDS             313..1728
                     /locus_tag="VIY07_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HEY6380798.1"
                     /translation="MRKPLISAFMLVSTAVSLHAQTSSPNDLNRRIVERRAFEAVVWG
                     MPVVNYDLMVQEMLSKTSGKVNQVIYWGRPLDSKNQTLTPNPDALYFIAFYNTKDGPM
                     VLDLPPADDSGSFNANIVTVWQMPLEDAGRLGVDKGQGVKLLILPPDYTGTPPEGYAT
                     RQSDTFGGYMLFRANLKSHSAADVDASIAYGKKMKIYPLTQAANPPATVFTDVKDIDF
                     DSTIRYDASFFNNLDRMVQNEPWLQRDRAMIDQLKTLGIEKGKPFMPSDATKTMLASA
                     AREAHVFLEAKYDAGLPAFFSATSRWTAPAPPDLIKVMQDGYADVNAYPVDERGMVYS
                     YAFIGLKRLGVGQFYLISIRDKDGDSFDGAKTYRLNVPPNVPVDQYWSVTAYDRETHA
                     LIKNMPRASRSSQIPEMQKNADGSIDVYIGAKAPGGKESNWVPTDPARKFELMARFYG
                     PKKEFFDKVWKLPDVEKVTAQ"
     gene            2066..3049
                     /locus_tag="VIY07_03240"
     CDS             2066..3049
                     /locus_tag="VIY07_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018494642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HEY6380799.1"
                     /translation="MSIGLISLLDDIAAIAKVAAASLDDVATQAAKAGIKAAGVVIDD
                     AAVTPRYVLGFAARRELPIVGKIAAGSLRNKLLVLLPATLALSYFLPSVVTPLLMAGG
                     AYLCYEGVEKVVEAIMPHQAHAHEAQLGTIALNPQTLEDEKVASAIKTDFILSAEIMV
                     ITLAAVPDGGILMQALVLALVGIGITVAVYGVVALIVKADDVGVALAKHDGDSATGGI
                     TRAFGRALVFGMPGFLTFLGAAGTAAMIWVGGAIIVHGLEAYGVHSLGQAIDSAAEAA
                     AHTLPSAAGPVKWIVRAVLSGVVGLSIGAASIPAVGFAVAPAWKLVKSCLR"
BASE COUNT          698 a          928 c          924 g          696 t
ORIGIN      
        1 ctggcgattt cattggggcc ccctgtgtag cccccttacc ctttgcattc atacactgat
       61 tcgaaatggc gcaagtaggt ttcacgcggc ggctgaccaa cgagactcct gccggctgac
      121 tgggtcctga gcgagcaaat cgtctcgatc cctgcggctc aagcttgaag cgcagtagca
      181 actaccaatc agcaacatcg tccgcttatg gccttagcgg acatcattgg acttgggtcc
      241 aactcgaccc cgtttgcaca tcttggaaaa ctagacgctc aactcttctg cgcacaggct
      301 cggaggcgtc ccatgagaaa gccgctcatt tctgccttta tgttggtctc gacagcggtg
      361 tcactacacg cgcagacctc gtctcctaat gacctaaacc gccggattgt agagcggcgc
      421 gcgttcgaag cggtggtctg gggcatgccg gtcgtcaact acgacctgat ggttcaggag
      481 atgcttagca agacgagtgg caaggtgaat caggtcatct attggggcag gccactcgat
      541 tcgaaaaacc aaacgctgac gccgaacccg gacgcgcttt acttcatagc attctacaac
      601 acgaaggacg gccccatggt gctcgacttg ccgcccgcgg acgacagcgg ctcgttcaac
      661 gccaacatcg tcacggtgtg gcagatgccg ctcgaggacg ccggccggct cggcgtcgat
      721 aaaggacagg gcgtcaagct tttgatcctg ccgccggatt acacgggaac tccgcccgaa
      781 ggctacgcga cgcggcagtc cgatacgttc ggcggctaca tgctgttccg ggcaaacctc
      841 aagagtcaca gcgctgctga tgtcgatgca tcgattgcat acggcaagaa gatgaaaatt
      901 tatccgctga cgcaggccgc caacccgccg gcaaccgtgt tcaccgacgt caaggatatc
      961 gatttcgatt ccaccattcg gtacgacgcg agcttcttca acaacctcga ccgcatggtg
     1021 cagaacgagc catggctgca acgcgaccgc gcgatgatcg accagctcaa gaccctcgga
     1081 attgaaaagg gaaagccctt catgcccagc gatgcgacca agacaatgct cgcctcggcg
     1141 gcgcgcgaag cgcacgtgtt tctggaggcg aaatatgatg caggccttcc ggctttcttc
     1201 tccgcgacaa gccgctggac ggcaccggcg cctcccgact tgatcaaggt gatgcaggac
     1261 ggctacgccg acgtaaatgc ctatcccgtc gatgaacgcg ggatggttta cagttatgct
     1321 ttcatcggac tcaaacggct tggagtcgga cagttctatt tgatctcaat ccgggacaag
     1381 gacggtgatt ctttcgacgg cgccaaaaca tatcggctca atgtgccgcc gaatgtgccg
     1441 gtcgaccaat actggtcggt gaccgcctac gaccgggaga cacacgcgtt aatcaaaaat
     1501 atgccgcgcg cgagccgttc ctcgcagatc cccgaaatgc agaagaacgc tgatggctcg
     1561 atcgacgtct atatcggggc caaggccccc gggggaaaag aatcgaactg ggtcccgacc
     1621 gatccagccc gcaaattcga gttgatggca cgtttctacg gtccgaagaa agagttcttc
     1681 gacaaggtgt ggaagctgcc ggacgtcgaa aaggtcacgg cgcagtaggc aagcgaaatg
     1741 gcctcatgcc aatcgtctag aaggcggtcg tggctagaat ttctggctca gcaaactgga
     1801 ttaagaccat cccgaacaag ggctggtttc cgtacttccg cttctagcgc cgaagcaggc
     1861 ttatttcgat aagtggcgtt aaacgacagc gaacaagtga agtgaggatg ttgaatgtcc
     1921 gctatcggcc cttagcggac attcgaattg cgcgttttga tgtccgcttt cgggggtaat
     1981 gcggacattt gtcccgccaa aatttgtttt gcagttatca ctcccttccg ccactactca
     2041 tagtctgaaa agagagcgaa tacccttgag catcggactg atctctcttc tcgacgatat
     2101 tgcggcgatc gcaaaggtcg cagcagcctc ccttgacgat gtagcgactc aggctgccaa
     2161 agcagggatc aaggcggcgg gtgtcgtcat cgacgacgcg gcagtcactc cgcgttacgt
     2221 gctcggattc gctgccaggc gcgaattgcc gatcgttggc aaaatcgctg cgggatcact
     2281 gcgcaacaag cttcttgtcc tgcttccggc tactttggcc ctgagctatt tcctcccttc
     2341 ggtggtcact ccgcttctca tggctggcgg tgcctacctc tgttacgagg gggtggaaaa
     2401 agtcgttgaa gccatcatgc cacatcaggc gcacgcccat gaagctcagc tgggcacgat
     2461 agcgttgaac ccgcaaacgc tcgaggatga gaaagtcgca agcgctatca agaccgattt
     2521 catcctctcg gcagagatca tggtgatcac gctggcggct gttcccgatg ggggcatctt
     2581 gatgcaggca ctcgtgttgg cgctggtcgg aattgggatc actgtcgcgg tctatggcgt
     2641 ggtcgcgttg atcgtgaaag ccgacgacgt cggtgtggct cttgcaaagc acgacggcga
     2701 ctcggctacc ggcggtataa cccgcgcatt cggacgtgcc cttgttttcg gcatgcccgg
     2761 cttcctaaca tttcttggag ccgccgggac tgccgccatg atctgggttg gtggcgctat
     2821 tatcgtgcat ggtctggagg cgtacggcgt gcattccctt ggccaagcca tcgattccgc
     2881 tgccgaagca gcagctcaca cgctgccgtc cgccgccgga ccggtgaaat ggatagttag
     2941 ggccgttcta tcaggggtcg ttggactgtc gatcggcgca gcgtcgatcc cagcagtcgg
     3001 atttgccgtc gcaccagcat ggaaactagt gaaaagctgt ttgcgttaga cgccaaggac
     3061 aagtctagat tgcagagcgt tggcttccag ccatacgccc aaattcgcgc ggggaggggg
     3121 gactactctg cgctacagga aagaatttgt tttgtagtat cgcttcctcc gccacgagag
     3181 cgcatgcact tcaacttatg aacttatgtt ctgcgatggc cgcgccttaa gtcgtcctga
     3241 tgtccc
//
LOCUS       DATDHO010000169         2948 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_156316, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000169 DATDHO010000000
VERSION     DATDHO010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2948)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2948)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2948
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_156316"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1280)
                     /locus_tag="VIY07_03245"
     CDS             complement(<1..1280)
                     /locus_tag="VIY07_03245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380800.1"
                     /translation="MADDQTHRTYRASEPPVRGQAKAPSSDPLAELARLIGQTDPFGE
                     YGRAAGRPTSPPPAEYPDWSNQPARSSYGEQGDLDARQPSSTQRSSGDRIYSGRAAPV
                     EQSTRQLSSDQNYGRQPYGSAPVTGEDFYQSQDEARYAANQGEYQQDAYEQDAAQYGE
                     EEYYEDAPPPRRRFAVMAIAGVCALAVVGTAGAFGYRALFGSSTANQPPPVIKADAGP
                     TKVVPAAAGKDAQASKLITERVNERGQSEKLVSREEQPIDKPATVVLSQAVQQSALGS
                     GVVGSEPKKVRTIAIRPDQSADGMPQGVAPVAATAPTRSPPQAARAAAPPAPRPSADN
                     SISEPEPSTNSTTPARGAPPVRQATPAPNVPLSLTPDPRTQERAQPPSQTAAVPPQAA
                     APAPTTSSGAFVQVSSQRSEGEAQAAYRSLQAKYP"
     gene            complement(1366..>2948)
                     /gene="argS"
                     /locus_tag="VIY07_03250"
     CDS             complement(1366..>2948)
                     /gene="argS"
                     /locus_tag="VIY07_03250"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEY6380801.1"
                     /translation="QLAESIAEKLRADGKISKVDVAGPGFINLVLRPHVWGEELRLVL
                     ESAMDYGRTSLGQGEKVNVEYVSANPTGPMHVGHGRGAVFGDALANLLEYAGYDVTRE
                     YYINDAGAQVDVLARSAFLRYREALGERIEIPEGLYPGEYLKPVGAELAAEHGMKLST
                     MKESEWLPIVRAKAVSMMMDAIRDDLGALNVRHDVFFSERSLVEGTRDEVGATIESLR
                     RSGEVYEGRLPPPKGGSPEDWEDREQTLFRSTDFGDDVDRPLKKSDGSYTYFASDIAY
                     HRSKVTRGFLNLIDVWGADHGGYIKRMQAAVKAVSAGKAELDVKLVQLVRLLRAGEPV
                     KMSKRAGEFITLREVVEEVGRDAVRFDMLYRKNDAVLDFDLAKVIEHSRENPVFYVQY
                     GHARGQSVFRNAREEMPELPEIASERAAYLKGASLDRLSDAGELSLLRHIALYPRTIE
                     AAAAAHEPHRIAFYLYELASEFHAQWTKGKDLPHLRFIIQNDPETTKARLALVQGIIT
                     VLASGLALLGVSAPEEMR"
BASE COUNT          533 a          944 c          873 g          598 t
ORIGIN      
        1 ggatacttgg cctgaagact gcgatatgcc gcctgggcct caccctcgct gcgctgcgac
       61 gatacctgga caaaggcgcc gctgctggtc gtaggagcag gagcggccgc ctgcggcgga
      121 actgccgccg tctggctggg cggctgagcc cgttcctggg tccgcgggtc cggcgttagc
      181 gatagcggca cattgggcgc cggggtggct tggcgtacag gcggagcgcc gcgtgccgga
      241 gtggtcgaat tcgtactcgg ttccggttcg gatatcgaat tatcggccga aggacgcggt
      301 gcaggtggcg ccgcagccct cgcagcttgc ggcggcgaac gggttggcgc ggtggccgcg
      361 accggcgcca caccctgcgg cattccatcg gctgactgat ccgggcggat ggcaatcgtg
      421 cgcaccttct tcggctcgct tccaactacg ccgctgccca aggccgactg ctgcacggcc
      481 tgcgacaaga ctaccgttgc aggcttatcg attggctgct cctcgcgcga gaccagtttt
      541 tcgctctggc cgcgttcgtt gacgcgttcg gtaatcaact tactcgcttg cgcatctttg
      601 ccggccgccg ccgggacaac cttggtcggc cccgcatccg ccttgatgac cgggggcggc
      661 tggttcgctg tcgacgaacc aaacagcgcg cgatagccaa aagctcctgc cgttcccact
      721 accgccaacg cgcatacccc agcgatcgcc ataacggcga agcggcgacg aggcggcggg
      781 gcatcctcgt aatattcctc ttcgccatat tgagccgcat cctgctcgta agcgtcctgt
      841 tgatactctc cctgatttgc cgcgtagcgt gcttcgtcct gggactgata aaaatcttcg
      901 cccgtcaccg gcgcgctgcc gtacggttga cgtccgtaat tctggtcgct cgaaagctgc
      961 cgcgtcgatt gctcgactgg cgccgcgcgc ccggaataaa tgcgatcgcc ggaggatctc
     1021 tgggtgctcg agggctgtcg cgcgtcgagg tctccctgct cgccgtagga cgatctggcg
     1081 ggctggttgc tccaatcggg atactcggcg ggcggcggcg aagtcggacg ccctgcagcg
     1141 cgaccatatt ctccaaatgg atcggtttgc ccgatcagtc gggcgagttc ggcgagcggg
     1201 tcactactcg gagctttcgc ctggccgcgc acaggcggtt cacttgcacg gtacgttcgg
     1261 tgcgtttggt cgtcggccat tcggtccccg gtcactcagc tcgtccccgc tcttataaac
     1321 gctggccatt caccacgcca aacgcagagc tgtggcagac gagacttatc tcatttcttc
     1381 cggcgcgctg accccaagca acgccaagcc cgaggcaaga acggtgatga tcccctgcac
     1441 cagagcgagc cgggcttttg ttgtttctgg atcattctgg ataatgaagc gtaaatgagg
     1501 caagtctttt ccttttgtcc actgtgcatg aaattcgctc gctaattcat atagatagaa
     1561 cgcaattcga tgcggttcgt gagcggccgc cgcagcctcg atggtgcgag ggtacagagc
     1621 gatgtggcga agaagtgaaa gctcgccggc gtcgctgagc cgatcgagcg atgccccctt
     1681 taggtatgcc gcccgttccg atgcgatttc gggaagctcc ggcatttcct cacgcgcatt
     1741 gcggaagacg gactgccctc gagcatgtcc gtactgcaca tagaaaaccg gattctcgcg
     1801 cgaatgctcg atcaccttgg cgagatcgaa atcgagcacg gcatcgttct tgcgataaag
     1861 catgtcgaag cgaaccgcgt cgcggccgac ttcctcaacg acctcgcgca atgtgatgaa
     1921 ctcgccagcc cgcttcgaca ttttcaccgg ctcaccggcc cgaagcaaac gcacaagctg
     1981 aacgagcttc acgtccagtt cggccttgcc ggcactgacg gctttgaccg ccgcctgcat
     2041 gcgcttgatg tatccgccat gatcggcgcc ccacacgtcg atcagattca agaatccacg
     2101 ggtcaccttc gaccggtgat aggcaatatc ggacgcgaaa taagtgtagc tcccgtctga
     2161 cttcttgagc ggccgatcga catcgtcacc gaaatcggtc gagcggaata gcgtctgctc
     2221 gcggtcttcc cagtcctccg gactgccgcc ctttggtggc ggaagacggc cttcatagac
     2281 ctccccgctc cgacgcaagc tttcgatcgt ggcacccact tcgtcccggg tcccttctac
     2341 cagggaacgc tcggaaaaaa acacatcgtg gcgtacgtta agcgcaccga gatcatccct
     2401 gatggcgtcc atcatcatgc tgaccgcttt cgcgcgcacg atgggaagcc attcgctctc
     2461 cttcatcgtg ctgagcttca tgccatgttc ggcggcaagc tcggcaccga ccggcttgag
     2521 atattcgccc ggataaaggc cctcgggaat ctcaatgcgc tcaccgagcg cctcgcgata
     2581 gcgcaggaaa gccgaacgcg cgaggacatc aacctgcgcc ccggcatcgt tgatgtaata
     2641 ttcgcgcgtg acatcgtagc cggcatattc aagcaagttc gcgagggcat caccgaacac
     2701 cgcgccgcgg ccgtggccaa cgtgcatggg gccggtcgga ttggcagaga cgtattcgac
     2761 attgaccttc tcgccctgcc ccaagctggt gcggccgtaa tccatggcgc tttccagcac
     2821 gagcctcagc tcctcacccc aaacatgcgg cctgaggaca agattgatga agccgggccc
     2881 cgcgacgtcg accttggaaa tttttccgtc ggcacgcagt ttctcggcga tgctttccgc
     2941 gagctgcc
//
LOCUS       DATDHO010000170         1846 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_205789, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000170 DATDHO010000000
VERSION     DATDHO010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1846
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_205789"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="VIY07_03255"
     CDS             <1..563
                     /locus_tag="VIY07_03255"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6380802.1"
                     /translation="PRDKKLLAAAPYEKAAIRESHKRHIVDYHRREAAGTILIDTDAR
                     YLYYVLPGGKAIRYGVTVGEEALAFSGVAKIGRMTEWPTWVPTEDIKRRMDVPNFVGP
                     GPQNPMGARALYLYEGNKDTLYRIHGTNQPEYIGEAISSGCIRMTNEDVIDLYKRVKQ
                     GTVVVVLAPHQGDSPSSPRVASYRFR"
     gene            complement(659..1459)
                     /locus_tag="VIY07_03260"
     CDS             complement(659..1459)
                     /locus_tag="VIY07_03260"
                     /inference="COORDINATES: protein motif:HMM:NF018597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HEY6380803.1"
                     /translation="MAEDVPLPRPRPSLWLEPHTFREAAGPDFNSTEVTNTPTDCNQR
                     LQAIAVIDLLPRLIGPDACGGGDIVRLHAVMPVGNGSRIELRPAPILRCPFAESVAGW
                     LREDAAPQADKLGAPLRAVETYDAFECRGRNRVAGGKLSEHGKANAVDLRSFTLADGR
                     ILGLTDVKAAKEFRDEMRDSACRRFTTVLGPGSDSYHESHIHLDLIERRKGFRMCQWE
                     VRTPKPEITAQASGQGTPQSGDQVTDQVPLPVPRPAIADSRPRQSRKL"
BASE COUNT          356 a          561 c          576 g          353 t
ORIGIN      
        1 cccctcgcga caagaaattg ctggcggcgg cgccttacga aaaggcggcg attcgggaat
       61 cccataagcg gcacatcgtc gattatcacc gcagggaagc agccggcacg atcctgatcg
      121 ataccgacgc acgctatctc tattatgttc tgcctggagg caaagcgatc cgctatggcg
      181 tcaccgtcgg cgaggaagcg ctggcgtttt ccggcgtggc caagatcggc cgcatgaccg
      241 agtggccgac atgggtgccg acggaagaca tcaagaggcg catggacgtg ccgaattttg
      301 tcggccctgg cccacagaat ccgatgggcg ctcgcgccct gtatctctat gaaggcaaca
      361 aggacactct ctatcgaatt cacggcacca atcagccgga atacattggt gaggccattt
      421 cgtccggttg catcaggatg accaacgagg atgtcatcga cctgtacaag cgcgttaagc
      481 agggcacggt agtggttgtg ttggcgccgc atcagggcga ctcaccgagc agtccgcgag
      541 tggcttcgta ccgcttccgc tgagggtcaa caggttgagc ctaagcggcg cccacaaggg
      601 cgccgtttgc tttttgtgcc tgtgctccag caattggcaa agcggctccc cgccgcattt
      661 acagtttccg cgactgcctt gggcgcgagt cggcaatggc cggtcgcggg accggcagcg
      721 gtacttggtc ggtgacctga tcgccgcttt ggggagtacc ttggccgctg gcttgagcgg
      781 tgatttcagg ctttggcgtc ctcacctccc attgacacat gcggaagccc ttccggcgtt
      841 cgatcagatc gagatggata tggctctcgt gatagctatc ggaccccggt ccgagcaccg
      901 tcgtgaaacg acggcaggca ctgtcacgca tttcgtcacg gaattctttc gccgccttta
      961 catccgtcag gcccaggatc cgtccgtcgg cgagagtgaa cgagcgcagg tcgacagcat
     1021 tggcctttcc gtgctcgcta agcttgccgc ctgcgacgcg attgcgacct cggcattcga
     1081 aagcatcata ggtttccacg gcgcgcaaag gtgcgccgag cttgtccgcc tgcggcgcgg
     1141 catcttcgcg cagccagccg gccacagact ccgcaaatgg acagcgcaat atcggagccg
     1201 gcctgagctc gatgcgtgag ccgttgccga caggcatgac tgcgtggagc cgcacgatgt
     1261 cgcccccgcc gcacgcatca ggcccgatca ggcggggcaa caagtcgatc acggcgatgg
     1321 cctgcaggcg ctgattgcag tccgtgggag tgttcgtgac ctcggttgaa ttgaaatccg
     1381 gcccggccgc ctcgcggaat gtgtgcggtt ctagccagag tgacggacgt ggccggggca
     1441 acggaacgtc ttctgccacc gcccctcctc cgccgggtcc tgtcagaaac aataaggcga
     1501 acagcaggtg ccgcggcgcc ggaccccgcc agcgtcgcga tattggtgca cgctgcagac
     1561 tcgaaattgg tgcagtgccg tagctcataa cgaaaccatt gcgcctgtcg gcgcggtggc
     1621 taaccttagg cgtgactggc gaggggccgg tccggaacct gaataacggc acaccctccc
     1681 gaaagtttcg ggcgggtgcg cccagagaga ggggaatgcc atgctcggcc tgatgcagga
     1741 ttggcctttg ctgtgccatc gcatcatcga ccatgccgcc agatatcatt gcgggcgaaa
     1801 gattatcacg cgctcgattg agggtccgat ccacacgacc aactat
//
LOCUS       DATDHO010000171         1773 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_404286, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000171 DATDHO010000000
VERSION     DATDHO010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404286"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /locus_tag="VIY07_03265"
     CDS             complement(<1..455)
                     /locus_tag="VIY07_03265"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY6380804.1"
                     /translation="MTESHELFSDGAAYERMMGRWSRVAGKSFLDWIELPSGLRCLDV
                     GCGNGAFTEELIARCAPASVMGLDPSEQQIAYARQRPGAKVAEFRVGDAQALPFADDT
                     YDAALMALVVAFLSDPAKAVAEMARVVRPGGWVATYMWDIAGGGVPVHPL"
     gene            complement(467..1525)
                     /locus_tag="VIY07_03270"
     CDS             complement(467..1525)
                     /locus_tag="VIY07_03270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt transporter"
                     /protein_id="HEY6380805.1"
                     /translation="MLRSRVARSILLSIFILFFLAAIDATLAQPFGVPRGTPSSDVGG
                     FAGWILAKQAEFYRMLSGLIRAAKADGSAAYTLLGVSFLYGVFHAAGPGHGKAVISSY
                     LVANNETWRRGIVLSFASAMLQAFTAIAIVGIAAALLGATAKAMGDTIRVIEIVSYAL
                     IMLIGLRLLWVKGRAFLRLLLGGKPAHSAPDHNHHHHDHVHEHGHAHHHKHAHCHHHD
                     HEEEASAWGHAHAPEPQELTGRHWLRRGLAAIVAVGLRPCSGAIIVLVFALAQGLFWI
                     GVASTFVMGLGTAITVAAIATLAVGARGLAGRLAEAKPGMGMLLVRGLETAAALVIVL
                     FGAALLTGYMVNERLMGF"
     gene            complement(1531..>1773)
                     /locus_tag="VIY07_03275"
     CDS             complement(1531..>1773)
                     /locus_tag="VIY07_03275"
                     /inference="COORDINATES: protein motif:HMM:NF017985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HEY6380806.1"
                     /translation="VKAKELKIEIYDPTIFVDFSFEKTNPAKLVGAPKCKLDVHLPRE
                     MTFAEGKKLSEIPADQKNTTMAWGAQFANKLVVTCP"
BASE COUNT          385 a          565 c          518 g          305 t
ORIGIN      
        1 agaggatgca cgggcacccc tccaccggcg atatcccaca tgtaggttgc cacccagccg
       61 ccgggacgca ccacccgcgc catttccgct actgccttgg ccggatccga aagaaaggcc
      121 acgaccagcg ccatcagcgc ggcatcatag gtatcgtctg cgaaaggcag cgcttgcgca
      181 tcgccgacgc ggaattcggc gaccttcgct ccagggcgtt gccgtgcata ggcgatctgc
      241 tgttccgatg gatcgagccc cataacgctc gctggagcgc agcgagcgat cagctcttcg
      301 gtgaaagcac cattgccgca gccgacgtcg agacagcgca gcccgctggg caactcgatc
      361 cagtcgagaa acgacttgcc ggcaacgcgg ctccagcggc ccatcatccg ctcgtaggct
      421 gcaccgtcgg aaaagagctc gtgggattcg gtcatgtcgt cggtcgctag aatcccatca
      481 atcgctcgtt caccatgtaa ccggtgagca acgcagcgcc gaacaacacg atcacgagcg
      541 cggcggctgt ttccagtccg cggacgagaa gcattcccat tccaggcttt gcctcggcga
      601 gtcggccagc gagcccacgc gcgccaacgg caagcgtagc aatggctgca accgtgatcg
      661 ccgtaccgag acccatcaca aacgtcgatg cgacgccaat ccagaacaag ccctgcgcca
      721 gcgcaaagac aagcacgatg atcgcgcccg agcatggacg caatccaacc gccacgatcg
      781 cggcaagccc gcgccggagc caatggcggc ccgtcagctc ctgcggctcg ggtgcgtgag
      841 catgccccca ggcggaggct tcttcctcat ggtcgtgatg gtggcaatgt gcatgcttat
      901 gatgatgcgc gtgcccgtgc tcgtggacat gatcatgatg gtggtgattg tgatcgggcg
      961 ctgaatgggc gggttttccg ccaagcaaaa ggcgcaggaa cgcgcggcct ttgacccaca
     1021 acaggcggag gccgatcagc atgatcaggg catagctgac gatctcgatc acgcggatcg
     1081 tatcgcccat cgccttcgcg gtcgcgccga ggagcgcggc cgcaatcccc acgatcgcga
     1141 tcgccgtgaa tgcctgaagc atagccgaag caaacgacag aacgatgcca cgcctccaag
     1201 tctcgttgtt ggccaccagg taggatgaga tcactgcctt gccgtgaccc ggccctgcag
     1261 cgtggaaaac accataaaga aacgaaacgc caagcagcgt gtaggcggcg ctgccatccg
     1321 ccttcgcagc acggatcaag cccgacagca tgcgatagaa ctccgcctgc ttggcaagga
     1381 tccagcccgc aaagccaccg acatctgacg atggcgtccc gcgtggcaca ccgaacggct
     1441 gtgccagggt tgcatcgatc gcggcgagaa agaacagaat gaagatcgac agcaaaatgc
     1501 ttcgcgcaac gcgagatcgc agcatcagcg tcaaggacag gtcaccacga gcttgttcgc
     1561 gaactgcgcg ccccaggcca tggtcgtatt cttttgatcg gccggaattt cgctcagctt
     1621 cttgccttcg gcaaaggtca tttcgcgcgg taagtgcacg tcaagcttac atttcggcgc
     1681 accgacaagc ttggctggat ttgttttctc gaaggagaag tccacgaaga tcgtcgggtc
     1741 gtagatttcg atcttcagct cttttgcctt cac
//
LOCUS       DATDHO010000172         5389 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_107145, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000172 DATDHO010000000
VERSION     DATDHO010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5389
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_107145"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VIY07_03280"
     CDS             <1..411
                     /locus_tag="VIY07_03280"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6380807.1"
                     /translation="RYKLLAFVISSSMTSVAGCLFAYYRGFVSIEAFDLFLSIQYVAM
                     IIVGGMGSLLGALLGAAFITVFPYLIEGVLRLLPNVQKLAGEIFAVNYAAFGLVMILF
                     LIFEPLGLVGIWRRVQNYFLLWPFRYKPLAGARK"
     gene            408..1208
                     /locus_tag="VIY07_03285"
     CDS             408..1208
                     /locus_tag="VIY07_03285"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380808.1"
                     /translation="MTALLQVDKIEVVYKRAITAVQGVTLSVAERQIVAVLGTNGAGK
                     TTTLRAISGFLGIDDARVTEGTITFKGVRIDNGPPHEIAGRGIVLVPEREKVFPNLTV
                     AENLAAPVPRAHGSNEPHRLSERAYYFFPRLAELRSRIAGLLSGGERQMLAIGAALMC
                     NPQLLLVDELSLGLAPVVVQDLTRRLTAIRDELGIAVLLVEQSAAAALEISDYAYVME
                     NGRIVLDGDRERLKSHQDVQEFYLGQAGSERRSYRDVKQYRRSRRWYG"
     gene            1201..1992
                     /locus_tag="VIY07_03290"
     CDS             1201..1992
                     /locus_tag="VIY07_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6380809.1"
                     /translation="MAELAVEHLHLRFGGLTVLDDVSFTVARGELFALIGPNGAGKTS
                     VLNCISGIYRGSGAIRFRGSDIAGRAPHEIAQLGLARTFQHGELFPQMSVLDNLLTGR
                     HARIQTNPLAEMLFLPGVRRAEIAHREAVERIIDVVELERYRHATVGSLPFGLQKLVG
                     FARALALEPSIMLLDEPSAGLNREEREDLARFILRLKHELGMTMIWIEHDMQMIADLA
                     DRVHVLDYGRTIAEGTPGIVLTDPNVLAVYLGTTDAIAAQFPSGA"
     gene            complement(1961..4321)
                     /locus_tag="VIY07_03295"
     CDS             complement(1961..4321)
                     /locus_tag="VIY07_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6380810.1"
                     /translation="MISRKAIVVATVAIALLIGLGGISWQLATGQIALAAPTDAATFA
                     GSEACAGCHQSEAKLWRTSQHERAMAHATDKSVLGDFNDASFQYFDVRSRFFRKDGKF
                     FVETDGPDGKLATFEVKYTFGVDPLQQYLIEFTDGRVQALSVAWDVRPKDKGGQRWFH
                     LYPNEQVKHDDVLHWTRLNQNWNFMCAECHSTGVRKNYDAAADRFATTWAEISVGCEA
                     CHGAGSRHIAWAQEQKRWWPFGKTEDPTKGLAVRFDERSGTTWTPNARTGMPQRNGMP
                     LGVRKEVETCGLCHARRAQFSEKWMPGQLLSKTHLLTPMYRNLTYADGQMRDIEEIYN
                     YLPFRQSKMFASGVTCSDCHDPHSAALRAPGDGVCSQCHMPSKYETGSHRHHENVNVS
                     VSCSSCHMPERTYMVVDRRHDHGFRVPRPDLSVKFGTPNACNDCHRDKSAQWAASAVE
                     GWFGPQREGFQTYAAAFHSAWTEQPNSGKLLGEIASDGNIPAIVRASALIELGQYLSR
                     ANLNLAQNGLSDSDPMVRMAALEMLSSVPANQLWSIVSPLLSDPVEGVRIRAVSLLAP
                     VPTASQPDADRSRFETAAADFVAAQRLNAERPEARVTLANFLTQRGRATEAEAEYKAA
                     LRLNPQFAPAAINLADLYRTLGREDEGLAALREAATAAPRDAGLHHALGLALVRQKKT
                     DEALVELRRAVELAPDQAQYSYVYAVGLHSAGRVDDAIAALKEILSKHPDNRDSLLAI
                     TSFYREAGNFAAALEYAQRLAKSFPDDRRISGLVDALRRQMETAPR"
     gene            complement(4352..4771)
                     /locus_tag="VIY07_03300"
     CDS             complement(4352..4771)
                     /locus_tag="VIY07_03300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380811.1"
                     /translation="MLARVVVIGSALPALGLSFALAQQTLVVPDNLFTQAGFVVKYAT
                     TPEKSALLRSFPPDKLVTRKKDGKLYYVYADAARCNCAYVGTPEAYAAYRNWANIGPG
                     GGGGSLNAMEAIDSDPGAPYIPADIGNSMDSILHPDF"
     gene            complement(4789..5121)
                     /locus_tag="VIY07_03305"
     CDS             complement(4789..5121)
                     /locus_tag="VIY07_03305"
                     /inference="COORDINATES: protein motif:HMM:NF023494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3551 domain-containing protein"
                     /protein_id="HEY6380812.1"
                     /translation="MSNVIRLLALPAFATAIALVAKPVHAQSPPWCAIMDNDGNTDCS
                     YYTEQQCLQTVSGIGGVCIRNPGGSAPQSTLPSSSENAQGLLQLQQQDPGPPPGLDNS
                     AAQGPPNN"
     gene            complement(5118..>5389)
                     /locus_tag="VIY07_03310"
     CDS             complement(5118..>5389)
                     /locus_tag="VIY07_03310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005267 - potassium channel activity
                     [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEY6380813.1"
                     /translation="ALAFVSLFMMVGLLVPNAFSGLVFEDNEKLASNLIYFSFVTLTS
                     TGYGDIYPVHPIARSLCNLETIIGQLYPATLLARLVSLEIAGRRR"
BASE COUNT         1021 a         1632 c         1622 g         1114 t
ORIGIN      
        1 cgttacaaac tgctggcgtt cgtcatctcc tccagcatga catcggtcgc cggctgcctc
       61 tttgcctatt accgtggctt cgtatcgatc gaagccttcg atctgttcct gtcgatccaa
      121 tatgtcgcga tgatcatagt cggcggcatg ggttcgctgc ttggtgcgct gctgggcgca
      181 gcgttcatca ccgtctttcc atatctgatt gagggagtgt tgcgactgtt gccgaacgtc
      241 cagaaactcg ctggagagat cttcgctgtc aattacgcgg cgtttggcct ggtcatgatc
      301 ctcttcctta tctttgagcc acttggcctc gtcggcatct ggcgtcgcgt tcagaactac
      361 tttctgcttt ggccgttcag gtacaagccg ctggcaggag cacgcaaatg actgccctgc
      421 ttcaggtcga caagatcgag gtggtctaca agcgagccat caccgccgtg cagggcgtca
      481 cgctgtcggt cgccgaaagg cagatcgtgg cggtgcttgg caccaatggc gcggggaaga
      541 ccacaaccct gcgcgcgatt tccggtttcc ttggcatcga cgacgcacgt gtgaccgagg
      601 gcaccataac gttcaaaggc gtcagaatcg acaacggacc gccgcacgaa attgccggaa
      661 gaggcatcgt cctggtgccg gagcgcgaaa aggtctttcc caacctcacc gtagcagaaa
      721 atcttgccgc accggtgccg cgcgcccacg gttcgaacga accgcatcgt ctcagcgagc
      781 gcgcctacta tttctttccc cggcttgccg aattgcgaag tcggatcgcc ggacttctct
      841 cgggtggcga gcggcaaatg ctggcgattg gcgccgcact catgtgcaat ccccaattgc
      901 tgctggtcga cgaattgtcg ctcggcctgg cgccagtcgt tgtccaggat cttacgcgcc
      961 gcctcactgc aatccgcgac gagcttggca tcgctgtctt gctggtcgag cagagtgcgg
     1021 ctgccgcact ggagatctcg gattacgcct atgtcatgga gaacggacgc atcgtccttg
     1081 atggggaccg cgaacgcctc aaaagccatc aggatgtgca ggagttctat ctcggccagg
     1141 cgggaagcga gcgccgctcc tatcgcgacg tcaagcaata tcgccgatcg cggaggtggt
     1201 atggctgagc tcgctgtgga gcacctgcat ctacgcttcg gcgggctgac cgtgctcgac
     1261 gacgtatcct tcaccgtcgc gcgcggcgaa ttgtttgctc tgatcggccc gaacggtgcg
     1321 ggcaagacca gcgttttgaa ctgtatcagc ggaatctatc gcggcagtgg cgcaattcgt
     1381 ttccgcggtt ccgatatcgc agggcgagcg ccgcacgaga ttgcccagct cgggctggca
     1441 cggaccttcc agcatggcga actgttcccg caaatgagcg tgctcgacaa cctgctgacg
     1501 ggacgacacg cgcgcatcca gacaaatccg ctggccgaaa tgctgttcct gcccggcgtg
     1561 cgacgcgccg agattgctca ccgcgaagca gtcgagcgca ttatcgatgt cgtggagctt
     1621 gagcgttacc gtcacgcgac tgtcggcagc ttgcccttcg gcctgcagaa gctggtcggc
     1681 tttgcgcgcg cgctggcgct ggagccgtcg atcatgttgc tcgacgaacc atcggcaggg
     1741 ctcaaccggg aagagcgcga ggacctggca cgcttcattt tgcgtcttaa gcacgagctc
     1801 ggcatgacga tgatctggat cgagcacgat atgcagatga tcgccgacct cgccgatcgg
     1861 gtccatgtcc tcgattacgg caggacgatc gctgaaggaa cgccgggtat cgtgctgacc
     1921 gatcccaacg tgctggcggt atatctcggc acgaccgacg ctatcgcggc gcagtttcca
     1981 tctggcgcct gagcgcgtcg accagccctg atatccgcct gtcatccgga aaacttttag
     2041 ccaggcgctg cgcgtactcc agggcggcgg cgaagtttcc ggcttcgcgg taaaaactgg
     2101 tgatggcaag caacgagtcg cgattgtccg ggtgcttgct cagaatttct ttcagtgccg
     2161 caattgcatc atcgacgcga ccagccgaat ggaggccgac cgcatataca tatgagtatt
     2221 gggcctgatc gggggccagc tcgaccgcgc gccgcagctc aacaagcgct tcgtcggtct
     2281 ttttctggcg caccagcgcc agtccaagcg cgtgatgcag gcccgcgtcg cggggcgcgg
     2341 cagtggccgc ctccctcagg gcggccaatc cctcgtcctc gcgtcccaat gtgcgataga
     2401 ggtccgcgag gttaatcgcc gcaggcgcaa attgcgggtt gaggcgcaac gccgccttat
     2461 attcggcttc ggcctcggtc gctcggcccc gttgcgtcag gaaattcgca agcgttacac
     2521 gcgcctcggg ccgttcggca ttgagccgtt gcgcggcgac gaaatccgcg gccgcagttt
     2581 cgaagcggct ccggtcggca tcgggttggc tggcggttgg gaccggcgca agcagcgata
     2641 ccgcccgaat gcgaactccc tcgaccgggt ccgagaggag cggcgaaacg atcgaccaga
     2701 gttgattggc tggaacgctg ctcagcatct caagtgccgc catccggacc atcggatcgc
     2761 tgtccgaaag cccgttctgc gcgagattga gattcgctcg cgaaagatat tggccgagct
     2821 cgatgagcgc gctcgcgcga acgatggcgg gtatattgcc gtccgaggcg atttcgccga
     2881 gaagttttcc ggagttcggc tgctccgtcc acgcggaatg aaaagctgct gcgtaagtct
     2941 ggaatccctc ccgctgcggc ccgaaccagc cctcaaccgc gctcgccgcc cattgagccg
     3001 atttgtcgcg atggcaatcg ttgcaagcgt ttggcgtacc gaacttcacc gacaaatcgg
     3061 gacggggaac ccgaaagccg tgatcatgcc gccggtccac caccatgtag gtgcgttcag
     3121 gcatgtgaca ggaggaacac gagacagaaa cattcacatt ctcatggtga cgatgcgacc
     3181 cagtttcata tttgcttggc atatgacact ggctgcagac gccatctccg ggcgcgcgaa
     3241 gcgcggcgct atgtgggtcg tggcaatcgc tgcaggtcac tccggacgca aacatcttgc
     3301 tctgccggaa cggcaggtag ttgtagatct cttcaatgtc gcgcatctgc ccgtcggcat
     3361 aagtcaagtt tcgatacatt ggcgtgagca ggtgagtctt cgaaagcaac tgcccgggca
     3421 tccatttttc cgaaaactgc gcgcgtctgg catggcagag gccgcatgtt tcaacctcct
     3481 tccgcacgcc cagcggcatt ccattgcgct gcggcattcc ggttcttgcg ttcggagtcc
     3541 acgtcgtacc gctgcgctcg tcgaaccgca ccgcgagccc tttggtcgga tcttccgtct
     3601 tcccgaaggg ccaccagcgt ttctgctctt gagcccatgc gatgtgacgc gatcccgcgc
     3661 catgacatgc ctcgcagcca acgctaattt ctgcccacgt cgttgcgaag cgatcggcag
     3721 cggcgtcgta gttcttgcgc acgccggttg aatggcactc ggcgcacatg aaattccagt
     3781 tctggttgag cctggtccag tgcagaacgt cgtcgtgttt gacctgttcg ttcggataaa
     3841 ggtggaacca acgctgtccg cctttatcct tcggccggac gtcccaggcg acggaaagcg
     3901 cctgcacgcg tccatcggta aactcaatca ggtattgctg aagcggatcg acgccgaagg
     3961 tatatttcac ctcgaaggtc gccagcttgc cgtccggccc gtcggtctcg acgaagaact
     4021 ttccgtcctt gcggaaaaaa cgggagcgca catcgaaata ttgaaagctc gcatcgttga
     4081 agtcgccgag cacggactta tccgttgcgt gcgccatggc gcgctcgtgc tgggaggtgc
     4141 gccatagctt cgcttcgctt tgatgacaac cggcgcaggc ctcgctgccg gcaaatgtcg
     4201 ctgcgtctgt aggcgccgcc agggcgatct gaccggttgc tagttgccag gatatgccgc
     4261 caaggccgat gagcagcgcg atcgccactg ttgcaacgac gatcgcttta cgggagatca
     4321 tttcagtatc cccgcgattg ccttccacgc gtcaaaaatc cggatgaagg atgctgtcca
     4381 tgctgttgcc gatatcggcg ggaatgtatg gagccccagg atcggaatcg atcgcctcca
     4441 tggcgttcag ggatccgccg ccgccgccag ggccgatatt agcccagttg cgataggccg
     4501 cgtacgcttc cggcgtcccg acgtaggcac aattgcatcg cgcagcatcg gcatagacat
     4561 aatagagctt gccgtccttt ttccgtgtca cgagcttgtc cggcggaaac gaccggagaa
     4621 gcgcgctttt ttccggcgtc gtcgcatatt tcacgacaaa gcccgcctgc gtgaacaggt
     4681 tgtcggggac cacaagggtc tgctgcgcga gcgcgaaaga aagtccgagc gccggcagcg
     4741 cggatccaat gacgacgaca cgtgccagca tgatcatccc tctcgcggct agttgttggg
     4801 cggcccctga gccgcggaat tgtcgagtcc cggcggcgga ccggggtcct gctgctggag
     4861 ctgcagcagt ccttgcgcat tttccgacga agacggcagc gtcgactgcg gcgcgctgcc
     4921 acccgggttg cgaatgcaca ctccgccgat gccgctcacg gtctgaaggc attgctgctc
     4981 ggtgtagtag ctgcaatcgg tgttgccgtc gttgtccatg atggcacacc agggagggct
     5041 ctgcgcgtgg accggctttg ccactaatgc aatcgctgtc gcaaatgccg gcaaggcaag
     5101 caggcgaatg acgttgctca tcgacgtcgt cccgcgattt ccaggctcac cagccgcgcg
     5161 agcagcgtcg ctggataaag ttgaccaatg atcgtttcca aattgcagag actccgagct
     5221 atcggatgga ccgggtaaat gtcgccgtat ccggtcgatg tcagcgtgac aaagctgaaa
     5281 taaatcaggt tactcgccag tttttcattg tcctcgaaaa caagtccact aaacgcgttc
     5341 gggaccagaa ggcccaccat catgaacaag gatacgaacg cgagcgcga
//
LOCUS       DATDHO010000173         1894 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_305177, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000173 DATDHO010000000
VERSION     DATDHO010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305177"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..230
                     /locus_tag="VIY07_03315"
     CDS             <1..230
                     /locus_tag="VIY07_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6380814.1"
                     /translation="EKRGRVSAINYLFVGSSNTLGEFESGLVAAWLGAMPSVVIGGVG
                     SLLVAAVWMMLFPDLRRIDRYQPAEREQMRA"
     gene            230..1207
                     /gene="denD"
                     /locus_tag="VIY07_03320"
     CDS             230..1207
                     /gene="denD"
                     /locus_tag="VIY07_03320"
                     /EC_number="1.1.1.410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-erythronate dehydrogenase"
                     /protein_id="HEY6380815.1"
                     /translation="MHILVTGAAGMIGRKLTARLVKDGRLNGQKIDRLTLIDVVAPDK
                     PSGFTGTLELSASDLSSPGAATTAAADRQDVIFHLAGVVSGEAEIDFEKGYRVNLDGT
                     RALLEAIRAAGNKPKVVFTSSIAVFGAPFPSSIPDDFHLTPLTSYGTQKAICELLLAD
                     YTRRGFLDGVGIRLPTICVRPGKPNKAASGFFSGIIREPLAGQEALLPVAETVRHTHA
                     SPRAAVGFLLHAAGLTRQQLGGRINLSMPGVSCTVGEQIEALRRVAGSKVAARIRRVP
                     DELVQRIVSGWAERLDAGRARDLGFQAEGRFDDIIRAHIEDELDGKIAN"
     gene            1277..>1894
                     /gene="map"
                     /locus_tag="VIY07_03325"
     CDS             1277..>1894
                     /gene="map"
                     /locus_tag="VIY07_03325"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEY6380816.1"
                     /translation="MTYVDAAVAPLRKTGQIKIHGPAAFEAMRKAGQLVARCLDMLAV
                     EVGPGMPTEKIDRLVFEYAMDHGALPATLMYRGYRKSTCTSLNHVVCHGIPGDKPLKD
                     GDIVNIDVTLILDGWHGDSSRMFTIGEIPRRAERLIDVTHEAMMRGIAAIRPGATSGD
                     IGYAIQTYVEAQHMSVVRDFCGHGLGRLFHDEPNVVHVGRPGEGIV"
BASE COUNT          363 a          561 c          587 g          383 t
ORIGIN      
        1 atgaaaaacg cggccgcgtg agcgccatca actacctgtt tgtcgggtct tcgaacacgc
       61 tgggcgaatt cgagtccggc ctggtcgccg cctggcttgg cgccatgccg tcggtggtga
      121 ttggcggggt gggctcgctg ctggtcgcag ccgtctggat gatgttattt cctgatctgc
      181 gccgtatcga ccggtaccaa ccggcggagc gtgaacaaat gagggcatga tgcatattct
      241 cgtcaccgga gccgcaggca tgatcggccg taagctcact gcgaggctgg tcaaggacgg
      301 tcgcttgaat ggacagaaga tcgatcgatt gaccctcatt gatgtcgtgg ctccggacaa
      361 gccgagcggt ttcacgggaa cactggagct ctcggcgagc gacctttcaa gcccgggcgc
      421 ggcaaccacg gcggccgcag acaggcagga tgtgatattt cacctggccg gagtggtctc
      481 gggcgaggcg gaaatcgact tcgagaaggg ctatcgcgtc aatctcgacg gcactcgcgc
      541 cttgctcgaa gcaatccggg ctgccggtaa caaacctaaa gtggtgttta cgtcctcgat
      601 cgcggtgttc ggcgcaccct ttccttcttc cattccagat gattttcatc tcaccccact
      661 gacgtcgtat gggacgcaaa aagccatttg cgaattgctg cttgccgact acacgcggcg
      721 cggatttctc gatggcgtcg ggatcaggct gccgacaatt tgcgtgcggc ccggcaagcc
      781 gaacaaggcg gcgtccggct ttttctctgg catcattcgc gaacctctcg ccggccagga
      841 ggcgctgctg ccggtcgccg aaaccgtgcg ccacacccat gcgagcccgc gtgccgcggt
      901 cggatttctg ctccatgcgg cgggcttgac gcgtcagcag cttggaggac gcatcaatct
      961 ttccatgccc ggcgtatcgt gcacggtcgg agaacaaatc gaagcgttgc gccgtgttgc
     1021 aggcagcaag gtcgccgcgc ggatccgccg ggtacctgac gagcttgtcc aacgaatcgt
     1081 ttccggctgg gccgagcgtc tcgacgccgg ccgcgcgcgt gatctcggat ttcaggcgga
     1141 gggccgtttc gacgatatta tccgcgcaca catcgaggac gaattggatg gaaagatcgc
     1201 gaattgacgc accttgacag cgaacgcggc gccttcattc gcttgcatcg tacgctgcaa
     1261 accttacatt gaagccatga cctacgtcga cgctgctgtc gctccattac gaaaaaccgg
     1321 tcagatcaag attcatggcc ctgccgcctt cgaggcgatg cgcaaggccg gtcaactcgt
     1381 tgcccgttgt ctcgacatgc tggcggtgga agttggcccg ggcatgccga ccgagaagat
     1441 cgaccgactc gtattcgagt atgccatgga tcacggcgcg ctccccgcta cccttatgta
     1501 ccgtggctac aggaagtcga cctgcacctc gctcaaccac gtcgtgtgtc atggcattcc
     1561 cggcgacaag ccattgaagg atggggacat cgtcaatatc gacgtgacgc tcatcctgga
     1621 cggctggcat ggcgattcca gccggatgtt taccatcggg gaaattccgc ggcgggccga
     1681 aaggctgatc gacgtcacac atgaggcgat gatgcgcggc atcgccgcca tccggcccgg
     1741 ggcaacgagc ggggatatcg gttacgcgat ccagacttat gtcgaagcgc aacacatgag
     1801 cgtggttcgc gacttctgcg gccatggtct tggccgacta ttccatgatg agcccaatgt
     1861 ggtgcacgtg ggacgaccgg gcgaaggaat cgtt
//
LOCUS       DATDHO010000174         3375 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_56473, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000174 DATDHO010000000
VERSION     DATDHO010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3375)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3375)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3375
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56473"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..399
                     /locus_tag="VIY07_03330"
     CDS             <1..399
                     /locus_tag="VIY07_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018447343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HEY6380817.1"
                     /translation="MNTGHEGSMATIHANTPRDAISRLEQMIGMAGVPMTVASIRSQI
                     ANAIQLIVQLQRQSDGRRKVTSIAEVTGLEGDIIQMQEIFKFVRTGTAPDGTVQGHFQ
                     ATGVRPRFLGHLANQGIKIPGNYFDPSQPL"
     gene            406..1365
                     /locus_tag="VIY07_03335"
     CDS             406..1365
                     /locus_tag="VIY07_03335"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEY6380818.1"
                     /translation="MFNFDSIYLVYLLIGVSAAMFAEGLYLLVFNNASYRKNINRRLK
                     VMDGKTDRESVLVQLRRERGLTSSGDYRLPLVSFNKLLLQSGLTIGFGRLILFIVMGA
                     TATFAAMITFQGNAFHAFLAALFSGVVLPPLVLRFLRNRRQKKFSAQFPDGIDIIVRS
                     LRAGHPVPIAIAMVSMPDPIGTEFGIVSDELTYGSDLESAMRNLFFRIGTDDLPLFVT
                     AVAIQRSTGGNLGEILENLSSVIRQRFKMRRKIRALAAEGRASALILSSLPIGMFAVI
                     QFLVPNFYGSVWNEDLTKIALALAGCWMGVGNFIMYRMVNFRI"
     gene            1368..2033
                     /locus_tag="VIY07_03340"
     CDS             1368..2033
                     /locus_tag="VIY07_03340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380819.1"
                     /translation="MDSIFAVFQEILTDSNTMFMGLLIFLAAGTLAFSLMEAMRVRGA
                     VKKRTARIVNDDERRGHGRSLQYSSAKALSKLIEYTTKHYSESNQENMKVLRRRLIQA
                     GIYDPRGVAFFFIGRTVLAIGLARCHIHYGAIDTADRRFIFLADGRGWWNCRLYRPEL
                     LYRSANFRTHAPASIGFSGLYGFARRVRGFRLVDGSFARARRQRAGPGLSVTQRQYPF
                     DQS"
     gene            1948..2337
                     /locus_tag="VIY07_03345"
     CDS             1948..2337
                     /locus_tag="VIY07_03345"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEY6380820.1"
                     /translation="MEASLERVGKELGQGYPSLSANIHLTNLEIRAGRPLKDALEHFA
                     DRLALEEARAFATLINQSIDLGSSITDAMRVYSDDMRHKRLSRAEEKAYALPAKLAVP
                     MMVCIFPVLFVVILLPVIVRLHVGGYF"
     gene            2488..3114
                     /locus_tag="VIY07_03350"
     CDS             2488..3114
                     /locus_tag="VIY07_03350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6380821.1"
                     /translation="MRPGIARGLTVAATALWLAGCSTSNGLSNLFAVKTPAEDGASAQ
                     ANAESLASEPTETQPSPDEATGTVQTPGSPPRSAKGLLGSDPYDELSLGKKHFRAHDY
                     GLAEKHFRRAVEAHPRDAEAWLGLAASYDRLRRFDLADRAYGQAVGILGPTVEILNNQ
                     GFSYMLRGDYKRAHAALAAARRKDPTNKYVQNNIRLLEESYRKGKAVQ"
     gene            3273..>3375
                     /locus_tag="VIY07_03355"
     CDS             3273..>3375
                     /locus_tag="VIY07_03355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain dehydrogenase"
                     /protein_id="HEY6380822.1"
                     /translation="MSELRPVTVITGASAGIGLALARVFARHGHELAL"
BASE COUNT          659 a         1021 c          970 g          725 t
ORIGIN      
        1 atgaacaccg gtcacgaagg atcgatggcc acaattcacg ccaatacgcc gcgcgatgcg
       61 atttcacgcc ttgagcaaat gataggcatg gccggagtgc caatgactgt cgcctcaatc
      121 cgcagccaga tcgcgaacgc gatccagctc attgtacagc ttcaacgcca gtcggacggc
      181 aggcgcaagg tcacctccat tgccgaagtc accggtctgg aaggcgatat catccagatg
      241 caggaaatct tcaagtttgt gcggaccggc actgcgcccg acggtaccgt gcaagggcat
      301 ttccaggcga ccggcgtgcg tcctcgcttc ctgggccatc tcgccaatca gggcatcaag
      361 atccccggca actatttcga tccctcgcag ccgctctgaa aggccatgtt caacttcgat
      421 tccatttacc tcgtgtatct gctgatcggc gtatcagcgg caatgttcgc cgagggcctg
      481 tacctgttgg tgttcaacaa cgcgtcctat cgcaagaaca tcaatcgccg gctcaaggtg
      541 atggacggga aaaccgaccg cgagagcgtg ctcgtgcagt tgcggcgcga gcgaggcctc
      601 accagcagcg gcgattatcg gttgccgttg gtcagcttca acaagctgtt gctgcagtcg
      661 ggcctcacca tcggctttgg ccggctgatc ctgttcatcg tcatgggcgc cacggctacg
      721 tttgccgcaa tgatcacatt tcaaggcaac gcgtttcacg cgtttttggc ggcgctcttt
      781 tccggcgtgg tattgccgcc gttagtgctg agattcctgc gcaatcgccg gcagaaaaaa
      841 ttcagcgccc aatttcccga tggcatcgac atcatcgttc gatcgttgcg ggcaggtcat
      901 cctgtcccga tcgcgatcgc gatggtgtca atgccggacc ccatcggcac cgaatttggc
      961 attgtctccg acgagctcac ctatgggtcc gatctcgaga gcgcgatgcg caatctgttt
     1021 ttccgaattg gaaccgatga cctgcccctg ttcgtcacgg ctgtggccat tcagcgatca
     1081 acgggcggca acctcggcga aattctcgaa aacctgtcat cggttatccg ccaacgcttc
     1141 aagatgcggc gaaaaattcg ggccttggca gcggaaggcc gcgcctcggc cctgatcttg
     1201 tcatcgctgc caatcggaat gtttgcggtc atccagttcc tggtaccgaa tttttacggc
     1261 agcgtctgga atgaagatct caccaagatc gcgcttgccc tggcgggatg ctggatgggc
     1321 gtcgggaatt tcatcatgta tcgaatggtc aatttcagga tctgaccatg gattcgatct
     1381 tcgccgtatt ccaggagatc ttgactgaca gcaacaccat gttcatgggg ctgctgatat
     1441 ttcttgcagc cggcacgctc gcgttctcgc tgatggaggc catgcgcgtg cgcggcgccg
     1501 tcaagaagcg caccgcgcgc attgtgaacg acgacgagcg ccgaggccac ggccgctcac
     1561 ttcaatattc aagtgccaag gcgctcagca agctcatcga gtacacgacc aagcactatt
     1621 cggaatcgaa ccaggaaaac atgaaggtgc tgcgccggcg actgatacag gccggcattt
     1681 acgatccgcg cggcgtcgcg tttttcttca tcggtcgtac cgttctggct atcggtctgg
     1741 cccgctgcca tattcattac ggtgccattg atacggccga tcggcggttc atttttctgg
     1801 ctgatggtcg tggctggtgg aattgccggc tatatcggcc cgagcttcta tatcggtcgg
     1861 cgaatttccg cacgcacgct ccagcatcga tcgggttttc cggactttat ggatttgctc
     1921 gtcgtgtgcg cggattcagg cttgtcgatg gaagcttcgc tcgagcgcgt cggcaaagag
     1981 ctgggccagg gctatccgtc actcagcgcc aatatccatt tgaccaatct tgaaatccgc
     2041 gcgggccggc ccctaaagga cgcgctcgag catttcgccg atcgtcttgc cctggaagaa
     2101 gcgcgcgcct tcgcaacatt gatcaaccag tcgattgacc tgggctcgag catcaccgat
     2161 gcgatgcgcg tttacagcga cgacatgcgt cacaagcggc tctcgcgcgc cgaggagaaa
     2221 gcctacgcgc tgccggcaaa gctggcggtg ccaatgatgg tttgcatctt tccggtcttg
     2281 ttcgtggtca ttctccttcc ggtgatcgtc cgcctccatg tcggaggcta tttctgagtc
     2341 cggcgtgctc ggctccacgg gtggtgctcc cgcgttgctt gcgttgaagc accaaaacac
     2401 ctccctcccg ctttggtgaa ggtattctta accatcctcc cctagcctga cggcgttctg
     2461 ttaccggcgg gtccgcaagg cgttcgcatg cgtcctggaa ttgcccgagg attgaccgtc
     2521 gccgcaaccg cgctgtggtt ggcgggatgc tccacctcca acggcctttc caatctattt
     2581 gccgtcaaga cgccagccga agatggggct tcggcccagg cgaatgccga aagcctagcg
     2641 agcgaaccaa cggaaaccca gccgtcaccg gatgaggcca cggggaccgt tcagacgcca
     2701 ggctcgcccc caagatctgc aaagggtctg ctcggcagcg atccatacga tgagctgagt
     2761 ctcgggaaga agcatttccg ggcgcatgac tacggtctgg ccgagaagca tttccggcgc
     2821 gcggtcgagg cccacccgcg cgacgccgaa gcctggctcg gcctcgccgc ttcctacgac
     2881 cgtttgcggc gtttcgatct tgccgaccgt gcctacggtc aggcggttgg catccttggg
     2941 ccaacagtcg agatcctgaa caaccagggt ttctcctaca tgctgcgtgg ggactacaaa
     3001 cgcgcccacg cagcgcttgc agccgcccga cgcaaagatc ccaccaacaa atatgtccag
     3061 aacaatatcc gtcttctgga agagagctat cgcaagggca aggctgtcca gtagttgcgc
     3121 caaagctgtt cccgaccgtg attatatctt tgggggcgtg gagccggcga aacgttcgct
     3181 cgaaactccc aagctcgtgt gaacgcctca cacgaacaaa aggatcggcc gccgaaggtg
     3241 ggcggccgat tgcatgagga tcagcagcgc ctatgagcga acttcgtcca gtcacggtca
     3301 tcacgggcgc gtcggcggga atcggcctgg cactggcgcg ggtctttgcg cgccacggcc
     3361 acgagttggc attgg
//
LOCUS       DATDHO010000175         2713 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_305376, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000175 DATDHO010000000
VERSION     DATDHO010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2713
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305376"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            439..825
                     /locus_tag="VIY07_03360"
     CDS             439..825
                     /locus_tag="VIY07_03360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380823.1"
                     /translation="MAVIRPEWAIANPLASGPDAYAPPDRRAPEDPPSGARVAFLRGQ
                     TGDRGQANEGSARNLDALIRRLAGTSMDEIDSVIRELEGIREMLRHEGERVSREIAGY
                     AGLSQASMSAMKVISDSLRAWKGRSE"
     gene            1115..2410
                     /locus_tag="VIY07_03365"
     CDS             1115..2410
                     /locus_tag="VIY07_03365"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY6380824.1"
                     /translation="MAVWTITEDTARSFNFPPEEQRPDKIKFDGEFPGFGLRIRTDQK
                     TGREHRSYIFQYKIGSKHRRLNCGKVGKVTAGEARKTANKYAMALLNREDPANERATA
                     PQERSHSVGASIPDYLAAKQPAMKPRSYEETKRHLEIQWASLHGFSIRNVVRANVAAE
                     TNAIAKRSGPVAANRARASLSAFFRWAMGQGLCDENPVVGTSKQQENGPRVRALSDAE
                     VAAVWLAAPENDYGRIVHLLMLTGCCRDEIGSLRWSEIDTVAKAITLTASRTKNHTEH
                     VVPLSERALKIIEAIPRRDRDFVFGSGRGGYSGWSKSKAELDEACKVKEWTLHDIRRT
                     VRTGLGKLGVAPHVAEAVVNHLPARLIRTYDRNAYADEKKAALDAWASHLEAIILPSR
                     PAGVSVRAVPNKRLESESPRASFAERLAGLMSRDQRASP"
BASE COUNT          603 a          781 c          813 g          516 t
ORIGIN      
        1 ggtacttgtc ctttggggcg attttgacgg tagctgtgcg gtgacgagcc ggcatctata
       61 cgcatgtata gacgaggtat aagtctgtgg atttctaccg aagaggcatt gtctatcgat
      121 ttcggaaagc cgcgcagcga cttccgatgc ttcaatgcgc ctttccagaa ggtagcgagt
      181 aaagcggtcc cggccccagc ttcgtgagcg cctgttcaac cgggaccgct acaagcggga
      241 aggacccagc ccgctcgata cccgctctat catcacgata atacctgctc gccagggagc
      301 ctatgaccgg cgcgcaacac ggcgcaaaat tgtgctgaca cattgatttt aaagggctga
      361 ttccagttga aaaggatttg cgcgctgcaa ttgtggtcgg caagttaggc gggaagaacg
      421 gtacgtcagg agggaaaaat ggctgtgatc cgacccgagt gggctattgc gaatccgctt
      481 gcctcaggcc cggacgcata tgcgccacct gaccggcgtg cgccggaaga cccaccgagt
      541 ggggctcgtg tcgcgttcct gcgcggccaa accggcgacc gcggtcaagc caatgagggc
      601 tccgcccgaa acctggatgc gttgatccgg cgcctcgcgg gtacctccat ggatgaaatc
      661 gacagcgtca ttcgtgagct ggaaggcata cgcgagatgc tgcgccatga gggcgaacgg
      721 gtcagccgag agattgccgg ctacgctggt ttgagccagg cgtcgatgtc cgcgatgaag
      781 gttatctccg atagcctcag ggcgtggaaa gggcggtccg agtagcgcga tcaacgcgcg
      841 gcccttcgtt gcccgtgacg ttcttgagat cgaccatcac gcgacaggcc gtcgtgcttg
      901 agccatgggc tggcgccacg cttcatacgg tcggagtggc ggagtgaact caccgacccc
      961 cagttcaaca gacatatgct ccctgtggat atggcaacaa agatttgcga atcgcaataa
     1021 acaagccatg aaccctcagt tatggtgaga ggggattgga agacggggaa agacgacctc
     1081 gatcttccca gattcttccc aggcgagggg cgatatggcc gtctggacga ttaccgaaga
     1141 caccgctcgc agtttcaatt ttcctcccga agagcagagg ccggacaaga tcaagttcga
     1201 cggcgaattc ccaggctttg ggcttcgcat acgtaccgat caaaagacgg gcagggagca
     1261 ccgcagctat atttttcagt acaagattgg ctcaaaacac cgccgcctga attgcggcaa
     1321 ggtcggcaag gtaacggcag gggaagcccg aaagacagcc aacaaatacg ccatggccct
     1381 tctcaatcgc gaggatcctg ccaacgaaag ggctaccgct cctcaagaac gttcccacag
     1441 cgtaggcgcg agcattcccg actatctggc tgccaagcag ccggcgatga agcctcgcag
     1501 ctacgaggag acgaaacgac atctggaaat ccaatgggcg tccctacatg ggttttccat
     1561 tcgcaatgtg gtgcgcgcca atgttgccgc cgaaaccaat gccattgcca agcgcagcgg
     1621 gcccgtggcg gccaatcggg ccagggcttc gctatccgcg tttttccgct gggccatggg
     1681 ccaggggcta tgcgacgaaa accccgtcgt cggcaccagc aagcaacagg aaaatggtcc
     1741 ccgcgtgcgt gcgctgtccg acgccgaagt ggcggccgtt tggcttgccg cgcccgaaaa
     1801 cgactacgga cgaatcgttc atctgctgat gctcaccggt tgctgtcgtg acgaaatcgg
     1861 ttcgctccgc tggtctgaaa tcgacacggt ggccaaggcg atcacactga ctgcgtcgcg
     1921 gacaaaaaat cacacagagc acgtggtgcc gctttcagag cgtgccctca aaattatcga
     1981 ggcgattccg cgccgcgatc gtgattttgt tttcggcagc ggccggggtg gatattccgg
     2041 ctggtccaaa tcaaaagccg aactggatga agcgtgcaaa gtcaaagaat ggacgttgca
     2101 cgacattcgc cggacagtcc gcaccggctt aggcaagctt ggagtggccc cgcatgttgc
     2161 cgaagcagtc gtcaaccatc ttcccgctcg tctcattcgt acctacgacc gcaacgctta
     2221 cgctgatgag aaaaaggcag cgctggacgc gtgggctagt catcttgagg caatcatatt
     2281 gccatcgagg ccggcgggcg tttcagtcag agcggtaccg aataagcgac ttgaatccga
     2341 aagtccgcgt gccagcttcg ccgagcgcct ggccggcctc atgagccggg accagcgtgc
     2401 atcgccctga tgcacgcatt tcttgctacg cagtagcgac gaaccgcttc ggcggatttc
     2461 aaagaaagca ggattggacc agtgtccaat cggcgaccgt tccacctcgg cgtattcttg
     2521 gcgtctcgaa tgccgtcaca agtcgaaagc cacccgccga ccttctgatc agcatcaccc
     2581 cgggcgtgcg caagcttgcg gaagctgcgg cgagccttcg acgctaagcc gaggcgaggc
     2641 cgaaacctgc ggcctgagtg acgagtctcg cgtgcagcag gggtttggaa aatctgggac
     2701 tcgcttatcc caa
//
LOCUS       DATDHO010000176         4209 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_56701, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000176 DATDHO010000000
VERSION     DATDHO010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4209)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4209)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4209
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56701"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /locus_tag="VIY07_03370"
     CDS             complement(<1..473)
                     /locus_tag="VIY07_03370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380825.1"
                     /translation="MPVIKAMETTVNKAEKEKRRVETKVGPKRPESADISRAGYGESF
                     AFTVRDAQPLTKVAHFWRTAAQASTIGMFVILLIAALSLARPVLLPVASAFVVTMMLG
                     PLSSRAERYRVPALLSALVFWLLVIAVCYGVVVLLGAPAVDWIGKAPDIGRSIQE"
     gene            639..2717
                     /gene="parE"
                     /locus_tag="VIY07_03375"
     CDS             639..2717
                     /gene="parE"
                     /locus_tag="VIY07_03375"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEY6380826.1"
                     /translation="MAKTATRKKPAKHPDLFDLPPAGRSSARGRGKSARTKPAARGSG
                     GEAGYTAKHIEVLEGLEPVRRRPGMYIGGTDEKALHHLFAEVIDNAMDEALAGHADWI
                     EVEMEANGFVSVTDNGRGIPVDPHPKFKNKSALEVIMCMLHAGGKFDSKVYETSGGLH
                     GVGVSVANALSERMEVEVAREQQLYRMAFERGKPKGKLEKAGRAPNRRGTRVRFKPDA
                     DIFGPKAAFKPERVFKMARSKAYLYGGVEIRWHCDKALLKGVEDVPEKATFHFADGLK
                     DYLAANLTGATLVHPDIFTGSAGKTGRHGAVECAVAWTADTDGFLNSYCNTIPTPDGG
                     THESGLRSALLRGLKDHAERVGQEKRAAPVTSDDVMTGAGCMLSVFVREPEFQGQTKD
                     RLATAEAQRIVEQAIKDPFDHWLAGNPMQANKLLDFVVERAEERIRRRQEKDIARKTA
                     VRKLRLPGKLADCTSSASEGSEIFIVEGDSAGGSAKQARDRRTQAVLPLRGKILNVAS
                     AGKDKLAQNAQLADLIQALGCGTGSHYHEKDLRYEKVIVMTDADVDGAHIASLLITFF
                     YRQMPKLIEGGKLYLAVPPLYRLSHGGKIVYARNDKHREALLKKEFHANAKVEVSRFK
                     GLGEMMAAQLKETTMDPAKRTLLRVMLADKEVKPTARAVERLMGTKAEARFEFIQEKA
                     EFASADLLDV"
     gene            2971..4029
                     /locus_tag="VIY07_03380"
     CDS             2971..4029
                     /locus_tag="VIY07_03380"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY6380827.1"
                     /translation="MKSDRPAILIVDDNEDNRYTLQTLLEADGFERIASASGGNEAVR
                     MIENEKFSLVLLDMMMPDLNGDEVLRLIKSKADTRDIPVVMISADTDTDKISKCIELG
                     ADDYLPKPFNPNILRARIGSALRRNSLRAMETDYLSRVEKQKGHSETLLRNILPAEIA
                     FRLRNGESNIADHYDDATVLFADIVGFGKITARMKAYEIIECLNQLFSEFDRLAEAYG
                     VEKIKTSGDSYMAVAGIPRPSDNHPRVAAELALEMIDSVRQLPLRLPEPFSIRVGLHS
                     GPVMAGVIGTRKFTYDVWGDTVNIAARMEAASQPNHVLSSASTAKALVGDFILDGPQR
                     IPTKEERVMEAFFVKRRP"
BASE COUNT          970 a         1195 c         1250 g          794 t
ORIGIN      
        1 ttttcctgga tgctgcgacc gatgtccggt gccttgccga tccaatccac cgcaggggca
       61 cccaggagaa cgacgacgcc gtaacagaca gcgatgacga gaagccagaa aacgagggcc
      121 gacagcagag cggggacacg atagcgctcc gctcgtgacg atagcggccc gagcatcatg
      181 gtgacgacaa aagccgaggc gaccggcagc aataccgggc gggcaaggct cagcgctgca
      241 atcaacagaa tgacgaacat gccgatggtc gaagcctggg cggcggtacg ccaaaaatgg
      301 gcaaccttgg tgagcggctg agcatcgcgg accgtgaacg cgaaactctc cccgtacccg
      361 gcgcgagaga tatcggcgga ctccgggcgt ttcggaccga ccttggtctc gacacgtctc
      421 ttctccttct ccgccttgtt gaccgttgtc tccatggcct tgataacggg caagtttccg
      481 tttagttgcc cctcctccac aggccggaaa ccggcgtctg gaaatgaccc aaatacctcc
      541 ttaaacggtc cttaagccgt gtggcgcagg tttacggggg tgcagccatg gcatagtggc
      601 tggcaaccga ttcgccgcga cattaattga aggctgcaat ggccaagaca gcgaccagga
      661 aaaaacccgc aaaacacccc gatctttttg atctgcctcc ggccggaagg tcgtccgccc
      721 ggggtcgcgg taaaagcgcg cgcacaaagc ccgccgcgag gggatcaggc ggggaagccg
      781 gatataccgc caagcatatc gaggtccttg agggactgga gcccgttcgc cggcggcccg
      841 ggatgtacat cggtggcacc gatgaaaagg cgctgcatca cctgtttgcc gaagtcatcg
      901 acaatgccat ggacgaggca ttggccggtc acgctgactg gatcgaagtc gaaatggaag
      961 caaacggctt cgtcagcgta accgacaatg ggcgcggcat ccccgtcgac ccccatccga
     1021 aattcaagaa caagtccgcg ctggaagtga tcatgtgcat gctgcacgcg ggcggaaagt
     1081 tcgactcgaa agtctatgag acttcgggcg gcctgcacgg ggtcggcgtt tccgtcgcca
     1141 acgctctctc ggagcggatg gaggtcgagg tagcgcgcga acagcaactt tatcgcatgg
     1201 ctttcgagcg gggaaagccg aaagggaaac tggaaaaagc cggacgcgca cccaaccggc
     1261 gcggcacccg cgtgcgcttc aagccggatg cggacatctt cggaccgaaa gcggcattca
     1321 agcccgagcg cgttttcaag atggcgcgct cgaaagccta cctttacggc ggcgtcgaga
     1381 tccgctggca ttgcgacaag gcgctgctta agggcgttga ggacgtccct gagaaagcca
     1441 cgttccattt tgccgatggg ttgaaagatt atcttgctgc caacctgacc ggcgcgacgc
     1501 tggtgcatcc ggatatattc acgggctcgg cgggcaagac cggtcgccac ggcgcggtgg
     1561 aatgtgccgt cgcctggacc gccgacacag atggatttct caactcttac tgcaacacga
     1621 ttccgacccc ggatggcggc acgcacgaat ccggtttgcg ctcggcgctg ctgcgtggac
     1681 tgaaagatca cgccgaacgc gtcggccagg aaaagcgtgc tgcccccgtc accagtgacg
     1741 atgtcatgac cggtgccggc tgtatgctgt ccgtattcgt gcgcgagccg gaatttcagg
     1801 ggcagaccaa ggaccggctt gctactgccg aagcgcagcg catcgtcgaa caggcgatca
     1861 aggatccatt cgaccactgg cttgccggaa acccgatgca ggccaacaag ctcctcgatt
     1921 tcgtcgtcga gcgcgccgaa gaacgaattc gccgccgcca ggagaaagat atcgcgcgca
     1981 agacggcagt gcgcaaattg cgcctgcccg gaaagctcgc cgattgcacg tcatcggcat
     2041 cggaagggtc ggaaatcttc attgtggagg gcgacagcgc cggcggctcg gccaagcagg
     2101 cgcgcgaccg gcgcacgcag gcggtactgc cgctgcgcgg aaagatcctg aacgtcgcct
     2161 cggccggcaa ggacaagctc gcacaaaatg cgcagcttgc cgacctgatc caggcactcg
     2221 gttgtggcac gggctcgcac tatcatgaga aggacctgcg ttacgagaag gtcatcgtga
     2281 tgaccgacgc cgacgtggac ggcgcgcaca tcgcttcgct gctgattact ttcttctacc
     2341 gtcagatgcc aaagctgatc gagggcggaa agctttacct tgcggtgccg ccgctctatc
     2401 ggctctcgca cggcggcaag atcgtctatg cccgcaacga caagcacagg gaagcgctgc
     2461 tcaagaagga attccatgcc aatgccaagg tggaggtcag ccgcttcaag ggcctcggcg
     2521 agatgatggc agcccagttg aaagaaacca ccatggatcc ggccaaacgc acgcttctgc
     2581 gcgtcatgct ggccgacaaa gaggtgaagc cgaccgctcg agcggtcgag cgcctgatgg
     2641 gaacgaaggc cgaggcgcgc ttcgaattca tccaggaaaa agcggagttc gcgagcgcag
     2701 atttgctgga cgtttgatcg cgccgcgcta tgagcggttg gcaagcagtg tcgctattct
     2761 cactctagtt ccagaacttt tatctgtcgc ttcgaaaaat ttatccaaag cacgtggcca
     2821 tgccgaaagg ctatggaact gtcctcgcgc tcatgtgtgc aaattatcgg cggctaagat
     2881 caatgatgtg ataaattacg atttgcctgg aaggtagccg gttacgctcc tgtgcagtcg
     2941 ctcagatatc gttcacagcc tgaggccgct atgaaatcag atcggcccgc aatcctcatt
     3001 gtcgacgaca atgaggacaa tcgatacacg ttgcaaaccc tcctagaagc agacggcttt
     3061 gaacgaatag caagcgcatc cggcggcaac gaagcggtga gaatgatcga gaatgaaaaa
     3121 ttcagcctcg ttttgctcga tatgatgatg ccggatttga acggcgacga agttctgcgg
     3181 ttgatcaaga gtaaggcgga tacaagagat atccccgttg tcatgatcag cgccgatacc
     3241 gacacggaca aaatatcgaa atgcatcgag cttggcgcag acgattatct gccgaaaccg
     3301 ttcaatccga acatcctgcg tgcacgcatc ggatctgcac tgcggcggaa ttccttgcgg
     3361 gccatggaaa ccgactacct ttcgagagtc gaaaagcaaa aaggacattc cgaaacactg
     3421 ttgcgaaata ttcttcctgc tgagattgct ttccggcttc gaaacggcga aagcaacatt
     3481 gccgatcact acgacgatgc cacggtgctc tttgccgata tcgtcggatt cgggaaaatt
     3541 acggcgcgga tgaaggctta cgaaattatc gagtgcctta atcagctgtt cagcgaattc
     3601 gaccgcctgg ctgaggccta cggagtcgag aaaatcaaaa cgagcggcga tagctatatg
     3661 gctgtcgcag ggattccacg acccagcgac aatcatccgc gggtggcggc tgaactggct
     3721 ctcgagatga tcgattcagt acgacagtta cccttgcgcc tgccggaacc gttttcaatt
     3781 cgggtcgggt tgcattccgg ccccgttatg gcgggcgtta ttggtactcg caagttcacc
     3841 tacgatgtct ggggagacac cgtcaacatc gcggcccgga tggaggctgc aagccagccg
     3901 aaccacgtgc tgagttctgc ttcaacggcg aaggctttag tcggcgactt tattctcgac
     3961 ggcccgcaaa ggattccaac aaaagaagaa cgcgtgatgg aggcattttt cgtcaagcgc
     4021 cgcccctgat cagtggtggc acgccatccg cgcacgatct tcagcattca atagaggagg
     4081 aacaatgatg cctctgttgc gcttccattc agtgactgga cttttcgcga ttgcgctcgt
     4141 tgctttcgca gtcagcagtt atggactgca accgttgcac ggtcagccaa gcaacgacga
     4201 cgttgtggt
//
LOCUS       DATDHO010000177         2951 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_404732, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000177 DATDHO010000000
VERSION     DATDHO010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2951
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404732"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..652)
                     /locus_tag="VIY07_03385"
     CDS             complement(<1..652)
                     /locus_tag="VIY07_03385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HEY6380828.1"
                     /translation="MLQGWVVIAVALSYIGLLFLIASYGDRTRGLGREGRARLLIYPL
                     SLAIYCTSWTFFGSVGLASRTGFDFLTIYVGPILMIALFGSLLMRVVRLAKTQNITSI
                     ADFIGARYGKGQAVAATVALIAIIGTIPYIALQLKAVSSSLETILAHITSSTEVTRPL
                     LGDIALFVALSMATFAVLFGTRHIDATEHQDGLMLAIATESIVKLLAFLAVGIFVTF"
     gene            868..1530
                     /locus_tag="VIY07_03390"
     CDS             868..1530
                     /locus_tag="VIY07_03390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6380829.1"
                     /translation="MASETPGTRNLFIVDDDPMMRDALSIVFTLAGYRVIVFADAETF
                     LAAARTRVPACVLLDLHLPDKSGVELLKELDAHNYPAPVFIITGDGDVSSAVEAVKSG
                     AFDYLVKPLDARAIVARVNGAIAAFSDRFENANDGSSPLIDFPGRRLLTPRECEVLAE
                     ITGGASNKEAGRRLGISPRTVEVHRARIMDKIGARNAADLVRIVLSGSRGRFSSSPEL
                     AT"
     gene            1639..2751
                     /locus_tag="VIY07_03395"
     CDS             1639..2751
                     /locus_tag="VIY07_03395"
                     /inference="COORDINATES: protein motif:HMM:NF016999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HEY6380830.1"
                     /translation="MSAPTTHDRIVALRHLGETLTFATVGGSALGLVGVPAGWLSGSI
                     LAVAGASLAGRPMHVPTLLMRAIFILIGISLGAVVTPETLHGMATYPLSIGVLLVAMI
                     VISVCGAAYLRLVHNWGKVDAYLAAAPGGMSQVLALGAELGGDLRAIAIVQSIRVVVI
                     AVGLPAGLSALGLVGHAAPRVTGALSLAVIDELAILILVSSVVAIIAYQVRFPGGLLF
                     GAMLTSAVLHGSGLIQAVMPWWVANAAMVAMGAITGSRFANTPPRLLLNFLGAAFGSF
                     AAAVAIAAVFAAVLISVLSLRVAEVMIAFAPGSVDAMMLLALALNLDPVYVGAHHLTR
                     IFFVSLTMPLVARRTARSLKIKSESKPLLKRPPFQD"
     gene            complement(2771..>2951)
                     /locus_tag="VIY07_03400"
     CDS             complement(2771..>2951)
                     /locus_tag="VIY07_03400"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269049.1"
                     /note="catalyzes the formation of 5-aminolevulinate from
                     succinyl-CoA and glycine; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HEY6380831.1"
                     /translation="HGIYIQPINYPTVPRGMERLRITPSPYHDDALVNGLAEALVDVW
                     ERLGLPLRSRAAAAE"
BASE COUNT          544 a          894 c          901 g          612 t
ORIGIN      
        1 agaacgtgac gaagattccg accgccagga atgcaagaag cttgacgatc gattccgtcg
       61 cgatggccag catcagcccg tcctgatgtt cggtggcgtc gatgtgacgg gtgccgaaca
      121 gcacggcgaa agtcgccatc gagagcgcta cgaagagcgc aatgtccccg agaagcgggc
      181 gggtaacctc ggtgcttgaa gtgatatgcg caaggatcgt ttcaagcgac gatgacactg
      241 ccttcagctg caacgcgatg tagggaatcg tcccgatgat cgcgatcagg gcgactgtcg
      301 cggcaactgc ctggcccttg ccgtagcgcg cgccgatgaa atcggcgatc gaggtgatgt
      361 tctgtgtctt ggcaaggcgc acgacccgca tgagcagcga gccaaacagg gcgatcataa
      421 ggatgggccc gacatagatc gtcaggaaat caaatcccgt gcgtgaagcc agcccaaccg
      481 aaccgaaaaa tgtccacgag gtgcaataga tcgccagcga aagtggatag atcaacaaac
      541 gcgcgcgacc ctcgcgaccg agaccgcgtg tccggtcgcc gtagctcgct atcaggaaca
      601 gcagcccgat gtacgagagc gcgacggcaa ttacgaccca accctgcagc atgaactctc
      661 cggatcggga ccaggcccga cgtggcagga ctgtggctaa atcaccacag aatgccggcg
      721 cggtctatcg atgctcgccc caccgcacca gcctaccaat cgcccctcca atcatacctt
      781 aaactattgt tataccagca tttttgactt cacctggcgc gtctgtcgct gcaaaatgga
      841 tcgcggtttg atttgtagga agcggttatg gcttcggaga ccccgggaac ccgtaacctt
      901 ttcatcgtcg atgacgatcc gatgatgcgc gatgcgcttt cgatcgtttt cacgctggcc
      961 ggctatcgcg tcatcgtttt tgccgatgct gagacgtttc tcgccgctgc gcgcacgcgc
     1021 gtgccggcct gcgtgttgct tgacctgcac ttgcctgaca agtccggtgt cgagctcctc
     1081 aaggaactcg atgcgcacaa ctatccggct ccggtcttca tcataactgg cgacggggac
     1141 gtgagttcgg ccgtcgaggc cgtgaaaagc ggtgcatttg actatctcgt aaaaccgctc
     1201 gacgcgcgcg ccattgttgc ccgcgtcaac ggcgcgatag cggcattctc cgatcgattt
     1261 gaaaatgcta atgacggaag cagtccgttg atcgatttcc cgggccgacg tctgctgacc
     1321 ccgcgcgaat gcgaagtgct cgcagaaatc accggtggtg cttcgaacaa ggaagctggc
     1381 cggcggctcg gcatcagccc gcgtactgta gaggtccatc gtgcccgcat catggataag
     1441 atcggcgcac gcaatgccgc ggatctcgtg cgcatcgtcc ttagcggcag cagaggccgg
     1501 ttttcatcat cgccagaact ggcgacgtaa ggtctgcatt gcaatctctg catttgacgt
     1561 ggcgatctcc acgcggcatt gatcgcccgc gccgggccaa agccacacgt ccggtcggct
     1621 gcccgaaagc cctgagcatt gtccgcgcct accacccacg accgaatcgt tgcattgcgc
     1681 catctcggcg agaccctgac gtttgcgacg gtcggcggtt cggcgttggg cctcgtcggc
     1741 gttcctgccg gctggctctc gggttctatc ctcgccgttg ccggcgcatc gctggcgggc
     1801 cggccgatgc atgtgcccac attgttgatg cgcgcaatct ttatcctgat cgggatatcg
     1861 ctcggcgccg tggtcacgcc cgagacattg cacggcatgg ctacctaccc gctgagcatc
     1921 ggcgtcctgc ttgtagcgat gatcgttatc tccgtctgtg gtgcggccta tctgaggctg
     1981 gtgcacaact ggggcaaagt cgacgcatat ctggccgctg cgccgggagg aatgtcacag
     2041 gtgctggcgt tgggcgccga gctcggcggc gacctgcgcg ccattgcgat cgtgcaaagt
     2101 atacgcgtgg tggtgattgc cgtgggcttg ccggccggat tgtcggcgct cggcctggtc
     2161 ggtcacgctg cgccgagagt caccggcgcc ctgagcctcg cggtgatcga tgagctcgcg
     2221 atcctgatat tggtctcaag cgttgtcgcg atcattgcgt atcaagtccg ctttcccggc
     2281 gggctgcttt tcggagccat gctcacttct gcggtgctgc atggaagcgg cctcattcaa
     2341 gcggtcatgc cgtggtgggt tgcaaatgcg gcgatggtcg caatgggcgc aattaccggc
     2401 tcacgcttcg ccaacacgcc gccacggctg ttgctgaatt tcctcggcgc cgcattcggt
     2461 tcgttcgcgg ccgccgttgc gatagcggcg gtattcgcag ctgtgcttat cagcgtattg
     2521 tcgttgcgcg ttgccgaagt catgatcgcg tttgcgcccg gctccgtcga cgcaatgatg
     2581 ctgttggctc tcgcgctcaa cctcgacccg gtttacgtcg gagcgcatca tctcacgcgt
     2641 attttctttg tgtcgttgac gatgccgctc gtggcgcggc gaacggcgcg ttcgctcaag
     2701 atcaagagcg agtccaagcc gctgctcaag cggcccccgt ttcaggactg aggcgtttgc
     2761 gattacgcgg ctactcggcc gcagccgccc gcgatcgcaa cggcaatcca agccgttccc
     2821 atacgtcgac aagggcctcg gccagcccgt tgaccagcgc gtcgtcgtga tagggcgaag
     2881 gcgtgatgcg caaccgctcc atgccgcgtg ggacggtggg ataattgata ggctgaatgt
     2941 aaatgccatg c
//
LOCUS       DATDHO010000178         4739 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_206309, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000178 DATDHO010000000
VERSION     DATDHO010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4739
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206309"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..1546)
                     /locus_tag="VIY07_03405"
     CDS             complement(56..1546)
                     /locus_tag="VIY07_03405"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004368 - glycerol-3-phosphate
                     dehydrogenase (quinone) activity [Evidence IEA];
                     GO_process: GO:0006072 - glycerol-3-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HEY6380832.1"
                     /translation="MAEFDLAIIGGGINGTALARDAAGRGISVLLVEMNDLGSGTSSA
                     SSKLIHGGLRYLEHRAFRLVREALNEREVLLRMAPHLVRPMRFMLPPVPGLRSALLLR
                     FGLILYDLLGARKLLPASRTVDLTHHAVGQPLKRTFRYGFEYSDCWVDDSRLVVLTAL
                     DAAERGAVIRTRTRCARAERKDEWELVLNVRGRREVKTARVLVNAAGPWIGAVADTVI
                     REPLPKAVRLIKGSHIVVRRHFVHECGYLLQAQDRRIVFVLPFAREFALIGTTDENFV
                     GDLNSVAPEPSEITYLCNVVNQYFRDKVTPDELVWSFSGVRALYDDHADRPEDVTRDY
                     ELVLDQRNGAPLLTIYGGKITTHRKLAEAALARIGHFFGARPRWTAGSKLPGGEFDPD
                     EFDAEVAKTTARWPFLPLSHAQRLVRAYGCRVERFLKQAKSAEELGPCVVDDLTAAEV
                     RYLVGTEWAQTADDVLWRRSKLGLKATAEDRKALDQFISSLLSPSR"
     gene            1729..2595
                     /locus_tag="VIY07_03410"
     CDS             1729..2595
                     /locus_tag="VIY07_03410"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012345.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HEY6380833.1"
                     /translation="MPSPRLLVIEGNSPLTTAEHVAAGGAPASKGYSDLLRELLPGVS
                     VDVCYPGEPSALLPEGSSLEGYDGIAITGSSLHIYNGGPEVTRQIELVRAALKTGTPL
                     FGSCWGLQVITAAAGGSVRKNPKGRELGFGRRIRLTEAGRKHPMYAGKLDVFNAPTVH
                     LDEVESLAPGTTVLATNEVSDVQSAEIRTNGSTAWAVQYHPEYPLREIAAIVRRIGPR
                     LIDEGFFADKADIKTFAQDLDALDRDPGCKRLAWRHGISKNVLDKKLRVGEIANWIEF
                     QVLPVRVKRGRG"
     gene            2598..3308
                     /locus_tag="VIY07_03415"
     CDS             2598..3308
                     /locus_tag="VIY07_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6380834.1"
                     /translation="MDLSGRHVVVTGGTGALGSAVVKTLVASGATCTVPYVLETEAQR
                     FPYNDQKQVTLLKTSNLSDEGDVAKVYAGVKSSAPLWASIHLAGGFAAGKVAETDKTA
                     LMTQIDNNFISCFICCRAAVQAMLASGQGGRIVNVAARPALEWRSGAGMAAYTAAKTG
                     VAALTVALAEEVAKDGILVNAVAPSIMDTPANRKAMPKANFDAWPKVEEVAATIAFLA
                     SPDNRVTRGAIVPVYGKS"
     gene            complement(3305..4681)
                     /locus_tag="VIY07_03420"
     CDS             complement(3305..4681)
                     /locus_tag="VIY07_03420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-CoA decarboxylase"
                     /protein_id="HEY6380835.1"
                     /translation="MNTSFFGELLQTIADRGRAFLARDRRGGTRGAPSARSESLVELC
                     EDLLSGRGEASGVALAREILTQYATLTTGPRIAFFEALAQRFGTDPERMERAIAVWRA
                     KPSDATAAEVHAASEPRRQELFRRLNLAPGGTVALVRMREQLMDALDRRHQDLAAVDA
                     DFVHLFSSWFNRGFLVLRRIDWSTPAIVLEKIIRYEAVHEIRGWDDLRRRIDPPDRRC
                     YAFFHPALVDDPLIFVEVAVERDIAGAIAPILASGRQQFVEPDKARIAVFYSISNCQR
                     GLSGVSFGNFLIKQVVEEICRELPKLTTFVTLSPVPGFAHWLAGELKAENSQAISASD
                     RVALELMERPHWWTDPEIFSKLEDPLMRAAAWYFLRARNQRGTPIDPVARFHLGNGAR
                     LERINWLADTSDRAITQAHGLMVNYQYDLDDIEKNHEAYAEGRTVVASNAVQRLLRPP
                     LELVPIAG"
BASE COUNT          964 a         1466 c         1437 g          872 t
ORIGIN      
        1 ggtggttccc tggtcaatgg caatgacgac ggtcggcaac ggttttgctc caaagttacc
       61 ggctgggcga aagcaatgac gagatgaact ggtcgagtgc cttcctgtcc tcagctgtgg
      121 cctttaatcc gagcttgctt cggcgccaga gcacatcgtc ggcggtctgc gcccattcgg
      181 ttcccacgag gtagcggacc tccgccgcgg taagatcgtc gacaacacac ggtcctaatt
      241 cctccgcgct ttttgcctgt ttgagaaatc gctcaacacg acagccatag gcccgcacca
      301 gtcgctgcgc gtgcgacagc ggtaaaaatg gccatcgcgc cgtcgtcttc gctacctcgg
      361 catcgaattc gtccggatcg aattcacccc cggggagttt ggaccccgcc gtccagcgcg
      421 ggcgcgctcc aaagaaatgg ccgatacggg ccagtgcagc ctccgccagc ttgcggtgcg
      481 tggtgatctt gcccccgtag atggtgagca acggcgcacc gttgcgctgg tcgaggacaa
      541 gctcgtagtc gcgcgtgacg tcctccggcc tgtcggcatg atcgtcatag agcgcgcgca
      601 cgccggaaaa cgaccacacc aattcgtccg gcgtaacctt gtcgcggaaa tattgattta
      661 ccacgttgca aagataggta atttcggatg gctcgggcgc gaccgaattc agatccccga
      721 caaaattttc atcagttgtc ccgatcaggg cgaactcgcg cgcaaaaggc aggacgaaaa
      781 caatccgtct gtcttgtgcc tgcagcaagt agccacactc gtgtacgaag tgccggcgaa
      841 caacaatgtg actgcccttg atcagccgca ctgctttcgg caaaggctcg cggatcacgg
      901 tatccgccac ggcgccgatc catggccctg ccgcattgac gaggacgcga gctgttttca
      961 cctcgcgccg tccacggaca ttcaacacca gctcccactc gtctttccgc tcggcccgcg
     1021 cgcaacgcgt gcgcgtacga atcacggcac cacgttcggc ggcatcgagc gcggtgagta
     1081 caacaaggcg ggaatcatcg acccaacagt ccgaatactc gaagccatac cgaaacgtgc
     1141 gtttgagcgg ctgaccgacc gcgtggtggg tgagatcgac cgtgcgcgaa gccggcagca
     1201 gcttccgggc gccgagcagg tcgtacagga tgagaccgaa gcgcagcaaa agcgccgaac
     1261 gcaggcccgg caccggcggc aacatgaagc gcatcggccg caccagatgt ggcgccatgc
     1321 gcaagagtac ttcgcgttcg ttcagcgctt cgcgaacaag gcggaacgcc ctgtgctcga
     1381 ggtagcgcaa tccaccatgg atcaacttgc tcgatgccga ggaggtgccc gaaccgagat
     1441 cgttcatctc gacgagcagc acgcttatac cccgaccggc tgcgtcgcgg gcgagcgccg
     1501 ttccgttgat gccgccgccg ataatggcga ggtcgaattc agccatgcct gatgattcgc
     1561 tttatgctgc agaatgatcg gcccgggcgg cacactcaag gacagagcac gttaacttct
     1621 catttgagcc acaaaattca tggacgttgc aaaataactg cgagacagcc atatcgaatg
     1681 cattgacgcc cctattttgt gcccgccaag ggaactgaac gagagtttat gccctcgcca
     1741 cgcctgctcg tcatcgaagg caattcaccc ctgacaacag ctgagcacgt cgctgcaggc
     1801 ggcgccccgg cgagcaaggg ctattcggac ctgttgcgcg agcttctccc cggcgtgtcg
     1861 gtcgatgtct gctatccggg agagccctct gcgctgctgc ctgagggttc atccctggaa
     1921 ggctatgacg gcatcgcgat cacaggctcg agcctgcata tctacaatgg cggccccgag
     1981 gtgacgcgcc agattgagct ggtgcgcgcg gcgctcaaaa ccggtacgcc gttattcggc
     2041 tcgtgctggg gacttcaggt gatcaccgcg gcggccggcg gcagcgtccg taaaaatcca
     2101 aaagggcgcg agctcggttt cggccgcagg atccgtctga ccgaagccgg ccgcaaacat
     2161 cccatgtatg ccggcaagct cgatgtcttc aatgcaccga ccgtgcatct cgacgaggtc
     2221 gagagcctcg cccccggcac tacggtgctc gccacgaatg aagtgtcgga cgtgcaaagc
     2281 gcagagatcc gcaccaatgg ttcgaccgcc tgggccgtgc aatatcatcc ggaatatcca
     2341 ttgcgcgaga tcgcagcaat cgtgcggcgc attggcccgc ggctgattga cgaaggcttc
     2401 ttcgccgata aggccgacat caagaccttc gcgcaggatc tcgacgcgct tgatcgcgac
     2461 cctggctgca agcgactcgc ctggcggcac ggcatcagca agaacgtttt ggacaagaag
     2521 ctgcgagtcg gtgaaatcgc caactggatc gaatttcagg tactgccggt tcgcgtcaag
     2581 cgcggacgcg gatgatcatg gatctctctg gacggcatgt ggttgtgacg ggcggcaccg
     2641 gcgccctggg cagcgcggtc gtgaaaacgc tcgtcgcttc cggcgcaacc tgcactgtgc
     2701 cctatgtgct cgaaaccgaa gcacagcgtt ttccttacaa cgatcagaag caggttacgc
     2761 tgctcaaaac atcgaacctt tccgatgaag gtgatgttgc caaggtctac gcgggcgtca
     2821 aatcgtcagc tcctttatgg gcctccattc accttgccgg cggcttcgca gcaggcaaag
     2881 tggcggagac cgacaagacg gcactcatga cgcagatcga taataacttc atctcgtgct
     2941 tcatctgttg ccgcgcagct gttcaggcga tgttggcgag cggccagggc gggcgcatcg
     3001 tcaatgtcgc ggctcgcccg gcactggaat ggcgctccgg tgcgggcatg gccgcctaca
     3061 ccgcagcgaa aaccggtgtc gccgccctca ccgtggcgct tgccgaggag gtcgcgaagg
     3121 acggcatttt ggtgaacgcc gtcgcgcctt cgatcatgga tacacctgcc aaccgcaagg
     3181 caatgccgaa agcgaatttc gatgcgtggc cgaaggtgga agaggtagcg gcgacgatcg
     3241 cttttctcgc ttcgcccgac aaccgcgtca cgcgcggcgc gatcgttccg gtttacggaa
     3301 aatcctagcc ggcaatcggg accagttcga gcggcggccg cagcaggcgc tgcaccgcgt
     3361 tggacgcgac gaccgtgcgt ccttcggcat aggcttcgtg gttcttctcg atatcatcga
     3421 gatcgtactg gtaattgacc atcagtccgt gggcttgcgt gatcgcccgg tcggaggtgt
     3481 cggcgagcca gtttatgcgc tcaagccgcg cgccattgcc cagatggaaa cgtgccacgg
     3541 gatcgatcgg cgtaccgcgc tggttgcggg cgcgtagaaa ataccatgcc gcggcccgca
     3601 tcagcggatc ttcgagcttg ctgaaaattt cgggatcggt ccaccagtgc gggcgttcca
     3661 tcagctcgag cgccacgcga tcgctcgcgc tgattgcctg cgagttttca gccttcaatt
     3721 cgccggcaag ccagtgggcg aagccaggca ccggcgacaa ggtgacaaag gtggtcagtt
     3781 ttggcagctc gcggcagatc tcctcaacaa cctgtttgat gaggaaattg ccgaatgaca
     3841 cgccggaaag gccgcgctgg caattcgaaa tcgaatagaa taccgcgatg cgcgccttgt
     3901 cgggttcgac gaattgctgc cggccgctgg caaggatcgg cgcaatggca cctgcgatat
     3961 cgcgctcgac ggcaacttcg acgaaaatca gcgggtcgtc gaccagcgcc ggatggaaga
     4021 acgcatagca gcggcggtcc ggcggatcga tgcgacgccg caaatcgtcc caaccacgaa
     4081 tctcgtgcac ggcttcgtag cgaatgatct tttccagcac gattgcgggc gtcgaccagt
     4141 cgatgcgacg cagcaccagg aagccgcgat tgaaccacga cgagaagagg tgcacgaaat
     4201 cggcgtcgac ggcggcaagg tcctggtgcc ggcgatcgag cgcgtccatc aactgttcgc
     4261 gcatccgcac gagcgcaacc gttccgcctg gtgcaaggtt gagtctgcga aacagctcct
     4321 gccggcgggg ttcggaagcc gcgtgcacct cggcggccgt tgcatccgac ggcttcgcgc
     4381 gccagacggc aattgcccgt tccatccgtt ccggatcggt cccaaacctc tgcgcaagcg
     4441 cctcgaaaaa tgcgatgcgc gggcccgtcg tcagcgtggc atattgagtg aggatctcgc
     4501 gcgccagggc cacaccggaa gcttctcccc ggccggataa aaggtcttcg cacagctcta
     4561 ccagactctc cgagcgagcc gatggtgcgc cgcgcgtgcc accgcgccgg tcgcgcgcca
     4621 gaaacgcgcg accacggtcg gcgatggttt gcagcagctc gccaaaaaac gaggtgttca
     4681 tctagccccg ggtcaggtcc gttgaactaa aggtccatgt ggcaatattt cgcaacata
//
LOCUS       DATDHO010000179         3275 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_256238, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000179 DATDHO010000000
VERSION     DATDHO010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3275
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_256238"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="VIY07_03425"
     CDS             <1..554
                     /locus_tag="VIY07_03425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6380836.1"
                     /translation="LETPGCYERLGTRAQMNPPVRDAVHRSAIWAGINDGVVDVLGSD
                     HAPHTREEKAKTYPASPSGMTGVQTLVPIMLDHVHAGRLSLLRFVDLTSAGPARLFGI
                     AAKGRIAAGYDADLTVVDLKRRETITDKWVASRAGWTPYDGVAVTGWPVGTFVRGHKV
                     MWEGSLTAPAHGERVRFSETLAS"
     gene            complement(560..829)
                     /locus_tag="VIY07_03430"
     CDS             complement(560..829)
                     /locus_tag="VIY07_03430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380837.1"
                     /translation="MATAEGFIYLRESNSDREQKRVALRYLQEAWAEARHDGVDGDCL
                     AQACLFAALVELVTTYGEQAAATFADGLSARIRNGEFSLEQGQRQ"
     gene            complement(944..1318)
                     /locus_tag="VIY07_03435"
     CDS             complement(944..1318)
                     /locus_tag="VIY07_03435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02301 family protein"
                     /protein_id="HEY6380838.1"
                     /translation="MKKSLIASLILLCVALPAHPQSDTPAPFDGDLARLGEILGALHY
                     LRAICGANEGQKWRNEMQALIDAEAPGGERRRKIVASFNRGYRGFQQTYRNCTPSADL
                     AIRRYLDEGAKISRDITARYAN"
     gene            complement(1383..1823)
                     /locus_tag="VIY07_03440"
     CDS             complement(1383..1823)
                     /locus_tag="VIY07_03440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEY6380839.1"
                     /translation="MADERTYPNRPFLAVSAAIIRGGKVLLVRRARKPALHLYTLPGG
                     AVEAGETLTDAVVREAREETGLAIEPVALAGCRELIARDPKGEVERHFVILSFAARWI
                     AGEPVLSEELDDARWLDVSEIGAYRTTEGLAEIVEEAARMLSRG"
     gene            complement(1829..2386)
                     /locus_tag="VIY07_03445"
     CDS             complement(1829..2386)
                     /locus_tag="VIY07_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380840.1"
                     /translation="MNIEGQAASGVFHEYQDGTAPLQASEWTRDAEKSALADAHINPD
                     TGLATDYLNRFSEAVMLLDMLSSAPEFRPDFLAWEPMSYREHFRLSHFKTRDVAIAAY
                     DRADPDIRNGLDTLAVTMTIVLEATRAAMEDADRRPETIAALAGNAIDWLKPLIARAG
                     ALINGESNEKNTLTPQELVDRLMKR"
     gene            2434..3192
                     /locus_tag="VIY07_03450"
     CDS             2434..3192
                     /locus_tag="VIY07_03450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA];
                     GO_process: GO:0018142 - protein-DNA covalent
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HEY6380841.1"
                     /translation="MCGRYAVTTAPEAIRTLFGYSEQPDFPPRYNVAPTQPIAIVRLV
                     NGKRQFALVRWGLLPSWVQDPKNFSLLINARGESVMDKPAFKAAMKYRRCLVPADGFY
                     DWKAGGTRRQPYYVRAKSGQPLAFAGLWETWIGPNGEELETAAIVTTRANRTLADIHD
                     RMPVIVPPDAFELWLNCTAVDAETAATLIAPAPDDLLEAYEVSSAVNRTANDNPQLVE
                     PNSGAEPEPVPKRAAGAGRRSGRARKDDGQGVLF"
BASE COUNT          608 a          994 c         1058 g          615 t
ORIGIN      
        1 cgctggagac gccgggctgc tacgagcgac tcggcactcg cgcgcagatg aatccgccgg
       61 tgcgagacgc cgtgcaccgt tcggcgatct gggctggcat caatgacggc gtggtcgatg
      121 tgctcggctc ggaccacgcg ccgcacacgc gcgaagagaa agcaaaaacc tacccggcga
      181 gtccatcggg catgaccggg gtgcagacgc tcgttccaat catgctcgat cacgtccacg
      241 ccggaaggct gtcgctgtta cgttttgtcg atctcaccag cgcgggaccc gcgcgcctgt
      301 tcggcattgc cgccaagggc cgcatcgccg ctggctatga cgccgatctg accgttgtcg
      361 atctcaagcg ccgcgaaaca atcacggata aatgggtggc gtcgcgtgct ggctggactc
      421 cctatgacgg cgtggcggtg accggctggc cggtaggaac gttcgttcgt ggccacaagg
      481 tcatgtggga gggcagtctc acggcgcccg cgcatggcga gcgggtgcgt ttctcggaaa
      541 ccttggcaag ctgagacggc tattgccgct gcccctgctc cagcgaaaat tcgccgttgc
      601 gaatgcgcgc gcttaggccg tcggcgaagg tcgccgcggc ctgttcgccg taggtcgtca
      661 cgagctcgac gagggccgcg aacagacagg cttgcgcgag gcaatcgccg tcaactccat
      721 cgtggcgggc ttccgcccag gcttcctgaa ggtagcgcag tgccacgcgt ttctgctcgc
      781 ggtccgaatt cgactcgcgc aggtagataa agccttcggc tgtggccatc gcagcgtccc
      841 cggcgcccaa gggggcgaac atcaaacccc acgtcccgca ggaacgttag cacgacggcg
      901 ggcgtgcgat agttcgcatt aaagaaaagg ttaattgcgc tacctagttg gcgtatcgcg
      961 cagttatgtc gcgggagatc ttggcgcctt catcgagata gcggcggatt gcaaggtcgg
     1021 cagagggcgt gcagttgcgg taggtctgct ggaagccgcg atagccgcga ttgaagcttg
     1081 cgacgatctt gcgtcggcgc tcgccaccgg gggcttcagc gtcgatcagc gcttgcatct
     1141 cgttgcgcca tttctgtcct tcgttggccc cacagatggc acggagatag tgaagcgcgc
     1201 cgagtatctc gccgagacgc gccagatcgc cgtcgaaagg cgccggggta tcgctctgcg
     1261 ggtgcgccgg cagcgccaca cagagcagaa tcaaagaggc aatgagagat tttttcacag
     1321 ttctgcccag gtccccaagg gggtgatatg cacccgcttg aaggcaatcg caaggcagga
     1381 ggtcatccac gcgagagcat ccttgccgcc tcctcgacga tctcagccag gccctcggtg
     1441 gtccggtatg cgccgatctc ggagacatca agccaacggg catcgtcaag ctcctcgctg
     1501 aggacaggct ctcctgcaat ccagcgcgcg gcgaaagata aaatgacgaa atgtcgttcg
     1561 acttctccct tcgggtcgcg cgcaatcaat tcgcggcagc ctgcgagcgc caccggctcg
     1621 atcgcgagcc cggtttcctc gcgcgcctcg cggaccaccg catcggtcag cgtctctccg
     1681 gcttcgactg cgccgcccgg caaggtgtaa aggtgcagcg cgggcttgcg cgcccgacgc
     1741 accagaagca ctttgccgcc gcggatgatg gccgcgctga cggcaagaaa ggggcggttc
     1801 ggataagttc gctcgtcggc cacgcgttct atcgtttcat cagcctgtcg acgagttcct
     1861 gcggggtgag cgtattcttt tcattggact cgccgttgat gagagctccg gcgcgcgcga
     1921 ttagcggctt caaccaatcg atggcgtttc cggcgagcgc cgcgatcgtc tccggacgac
     1981 gatcggcgtc ctccatcgcc gcccgggttg cctctagcac gatcgtcatg gtgacggcca
     2041 gcgtgtcgag gccgtttcgt atgtccggat cggcgcggtc ataggcggcg atagcaacat
     2101 cccgtgtttt gaaatgcgaa agcctgaaat gctcccgata gctcattggt tcccaggcca
     2161 gaaaatcggg gcggaattcc ggagcgctcg acagcatgtc gagcagcatg acggcttcgc
     2221 tgaatcgatt gagatagtcg gtcgcgagac ccgtatccgg gttgatgtgc gcgtcggcga
     2281 gcgccgattt ttcggcgtca cgcgtccact cggacgcttg caggggggcc gtgccatcct
     2341 gatattcatg aaagaccccc gaggccgcct ggccttcaat gttcacaatc gggggttaaa
     2401 ttgcgcttaa acgcagcagt tgaggtttga tcgatgtgcg gccgttatgc ggttactacg
     2461 gcgccggaag cgatccggac cctgttcggt tattctgaac agcccgattt tccgccgcgc
     2521 tacaacgtcg cgccaacgca gccgatcgcc attgttcggc tggtgaacgg caagcgtcag
     2581 ttcgcgctgg tgcggtgggg actgctgcca tcatgggtgc aggatccgaa aaacttttcc
     2641 ttgctgatca acgcgcgtgg cgagtcggtc atggataagc cggctttcaa ggccgcgatg
     2701 aagtaccggc gctgcctcgt accggccgat ggcttctacg actggaaagc aggtggcacg
     2761 cgcaggcagc cgtattacgt gcgtgcaaag tcgggccagc cactggcctt cgccgggctg
     2821 tgggagacct ggatcggacc gaacggggag gagctcgaaa cagcggccat cgtcacgacg
     2881 cgcgccaatc gcacgcttgc tgacattcat gaccgcatgc cggtgatcgt tccgccggat
     2941 gcttttgagc tctggctcaa ttgcaccgcc gtcgatgccg aaacggccgc gacattgatc
     3001 gcgcccgcgc cggacgatct gctcgaggcg tatgaagtat cgagcgcagt caatcggacg
     3061 gcaaatgaca atccgcagct ggtcgaaccg aattccggag ccgaacccga gccggttccg
     3121 aaacgggctg ccggcgcagg ccgccgctct ggacgcgcca ggaaggacga cgggcagggc
     3181 gtattgtttt gaccgactgg gcgggaacct tttcgccgcg gaagcatcaa tcaggcgaag
     3241 gatgccaaag atgactgtaa cgcaagcaca gcgcg
//
LOCUS       DATDHO010000180         1807 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_354766, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000180 DATDHO010000000
VERSION     DATDHO010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_354766"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(14..>1807)
                     /locus_tag="VIY07_03455"
     CDS             complement(14..>1807)
                     /locus_tag="VIY07_03455"
                     /inference="COORDINATES: protein motif:HMM:TIGR03434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6380842.1"
                     /translation="SVLARLKPDMTLEAARADLSAIRERQLQASPRSYFPDKQVRVIG
                     LSESLVGNARLALLVIFGAVAFVLLIACANVANLLVARAAARQKEMAIRAALGAARLR
                     LLRQLLTESLLLSLTGGVAGLLAAKWGLKLLVAMSPVGIARIDESGVDLFVFGFTCVV
                     AVLTGLLAGIFPALQASRNNVNETLTTQATVSVGRSGVIGRRTLPALMIAELALSLVL
                     LVGAGLMIKSFLRLLAVPKGFNPDGLLTLSLSSSNAVYPPNSPKRGAYFKETLERVQA
                     LPGVQSAGLTNFLPLGGPRYRMLLQIEGRTPFERGTEPVVEVNDISPDYFQTMGIEMR
                     AGRPFTAQDGAETSRVAIINETLARRFFPNENPLGHRLAIGQIPKTIVGVVGDTRHFG
                     LDQEVRPEIYFPLTQRPHPDSDRMRLVVRVAAAQNPTSLENLAATIRNQVRAMNQNEP
                     VGRIATMDEFLSNSLAERRFHTILLSVFAVVALVIAIVGIYGVISYAVSKRTHEIGVR
                     MALGAQRSDVLRMVIWRGMRLTLAGVTLGLAASLALTRVMKNLLFEVSATDPATFALL
                     ALLLVGVALIASYIPARRATKIDPLQALRHE"
BASE COUNT          411 a          545 c          507 g          344 t
ORIGIN      
        1 agtttcggcg ttcttattcg tgtcgaagag cctgtaatgg atcaattttc gtcgccctcc
       61 gcgccggaat gtagctcgca atcagggcga ccccgaccag cagtagggcg agcaatgcga
      121 aggtcgccgg atcggtcgcg ctcacctcga agagaagatt cttcatgacg cgggtcaagg
      181 cgagcgacgc cgccaacccc aacgtcacac cggcgagcgt caagcgcatc cctcgccaga
      241 tcaccatccg caacacatcg ctcctttgag cgccaagggc catccgaacg ccgatctcat
      301 gcgtccgctt gctgacggcg taggagatga caccgtaaat tccgactatc gcaatcacca
      361 gcgccacgac tgcgaagaca ctgagaagaa tagtgtggaa gcgccgctcc gccagcgaat
      421 tcgacaagaa ctcatccatc gtggcgattc gaccgacagg ctcattctga ttcattgccc
      481 gtacctgatt gcgtatggtt gcagccagat tttctagact ggttggattt tgcgcggccg
      541 cgactctcac taccaatctc atcctatcgg aatcggggtg cggacgttgc gtgagtggaa
      601 aataaatctc aggacgaacc tcctggtcta aaccgaaatg gcgcgtgtca cccactactc
      661 ccacgatagt ctttgggatt tgcccgatcg ccaaacgatg accgagcggg ttctcgttgg
      721 gaaaaaagcg acgggccagc gtttcgttaa tgatcgctac tcgcgacgtc tcggcgccat
      781 cctgggcggt gaagggccgt ccagcccgca tctcgatgcc catcgtctga aaatagtcgg
      841 ggctgatgtc atttacttca accaccggct ctgtgccacg ttcgaaaggg gtgcgtcctt
      901 cgatctgaag tagcatgcgg taacgaggtc cgccaagcgg aaggaaattg gtcaggccag
      961 ccgactggac tccgggcaga gcttggacgc gctcgagcgt ttccttgaaa taagcgccgc
     1021 gcttgggcga attcggaggg tatacagcat tgctggatga gagcgaaaga gtcaacaggc
     1081 catcgggatt gaagcctttg ggaacggcca gcagacgcag aaaactctta atcataagtc
     1141 ctgcgccgac gagcaaaacc agagagagcg cgagttcagc aatcatcaag gccggtagcg
     1201 ttcggcgacc gataacaccc gaccgaccga cgctcacagt agcttgcgtc gtgagcgttt
     1261 cattgacatt gttccttgac gcctggagcg cgggaaagat accggcgagc agaccggtca
     1321 aaaccgcgac cacgcaggtg aagccgaata caaagagatc aacaccgctc tcatcgatac
     1381 gtgcgatccc taccggactc atcgccacga gcagttttag gccccacttt gccgcgagca
     1441 gcccggccac accgccggtc agcgatagca acaaactctc ggttagcaac tgtcgcaaca
     1501 gtcgcagccg cgccgcgccc agagccgcgc ggatcgccat ctctttttgt ctggccgccg
     1561 ctcgcgccac caggaggtta gccacgttgg cgcacgcgat gagcaggaca aaggcgactg
     1621 ctccgaagat caccagcaag gccagtcgcg cattgccgac gaggctctca cttaatccga
     1681 tcactctaac ctgcttgtcc ggaaaatagg agcgtggcga ggcctgcagc tgcctttctc
     1741 ttatggcgga caaatccgct ctggcggctt ccagcgtcat gtccggcttg agacgcgcga
     1801 gcacgct
//
LOCUS       DATDHO010000181         1768 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_305704, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000181 DATDHO010000000
VERSION     DATDHO010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1768
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305704"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(129..827)
                     /locus_tag="VIY07_03460"
     CDS             complement(129..827)
                     /locus_tag="VIY07_03460"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY6380843.1"
                     /translation="MATIRIMSGGAPKEIFLQLTPLFERQSGHKVDYVFAVMSALRDK
                     LAAGEKADVLVMPTNILDGYQKDNAVRAQGRAVLGLVTINAVVRTGAAKPDLSTPEKV
                     RQAMLSSRAITHATPGATPSGTHMGKLVEQLGIVDAMKGKIIHRPALEGGVQLVASGE
                     AEIGFYPKSEVVNTDGLTVVGLLPAAIQLTTIYGAAVTATSPAPDAAAAFIKFMSDPA
                     HRAGWTNAGFDPPV"
     gene            complement(837..>1768)
                     /locus_tag="VIY07_03465"
     CDS             complement(837..>1768)
                     /locus_tag="VIY07_03465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380844.1"
                     /translation="DGAVQIDGVEPVFMTLPPEEIFFRAFRTLDFDICELSMSSFTVK
                     TAQGNCPYVGVPAFVSRAFRHTAIYVRTDRIKKPADLKGKKIGVPEYQLTANVWARAI
                     LEDDHGVKPSDIHWIRGGLTEAGRLEKITITLPKDVKLDDIPKGLTLSSMLDAGEIDG
                     FIGPRVPPAFERGDPKVGWLFPDPVAAAKDYYKRTGIFPIMHLIGVRRELAEQHPWLP
                     GAVFKAFEHSKTIAIEKLADTSSTKVTLPFVEERLIETRALMGDDYWSYGLTANRKTL
                     ETFLRHHHSQGLSSRLVTAEELFHPGTLETFKL"
BASE COUNT          345 a          530 c          528 g          365 t
ORIGIN      
        1 tgtttttcgc gctttctttc tcgcacgctg ttgcagcaca tcgcacgcaa acgcgcgaga
       61 aatgtcgagg agatgctctc cttcacgcag gagaagaata ttcacgtgaa gctgaaagtg
      121 ccgaaagctt agaccggcgg atcaaagcct gcgttggtcc agccggcgcg gtgcgccggg
      181 tcgctcatga atttgatgaa cgccgcggcg gcgtcgggcg ccgggctcgt cgcagtgacg
      241 gcagcgccat aaatggtggt aagttgaatc gcggccggta agaggccgac gacggtcaag
      301 ccatcggtat tgaccacctc gctcttcgga taaaagccga tttcggcctc tccactggca
      361 acgagctgca cgccgccctc aagcgcggga cggtggatga tcttgccttt cattgcgtcg
      421 acgatgccga gctgctcgac cagttttccc atatgtgtgc cgctcggcgt cgcgccgggc
      481 gtcgcatggg tgatggcgcg gctgctgagc atcgcctgcc tgaccttctc gggggttgag
      541 aggtccggtt tcgccgcgcc cgtgcgcacc accgcgttga tggtcacgag cccgagaacc
      601 gcgcggcctt gcgcacggac ggcattgtct ttctggtagc cgtccagaat gttggtcggc
      661 atcaccagga catcggcctt ctcaccggca gccagtttgt cgcgcagcgc cgacataacc
      721 gcaaagacgt aatcgacctt atggccggac tgccgctcga acaggggcgt cagctgcaga
      781 aagatctcct tcggcgcgcc gccgctcatg atgcgaattg tggccattga aaattcctag
      841 agcttgaacg tttcgagcgt gccgggatga aacaactctt ccgccgtcac cagccgcgac
      901 gacagcccct gtgaatgatg gtggcgcagg aacgtttcca gcgttttgcg gttagccgtc
      961 aacccgtacg accaatagtc gtcacccatc agcgccctcg tctctatcag ccgttcctcc
     1021 acgaagggca gcgtcacttt ggtcgaggag gtatcggcga gcttttcgat ggcgatcgtc
     1081 ttcgagtgtt cgaaggcctt gaagaccgca cccggcaacc aaggatgctg ctcggcgagc
     1141 tcacgccgca ctccgatcag atgcataatc gggaaaatgc cagtgcgttt gtaataatcc
     1201 ttggcggcag cgacaggatc gggaaacaac cagccgacct tcgggtcgcc acgctcaaag
     1261 gcaggtggca ctcgcggccc gatgaagccg tcgatttcgc cagcgtcgag catactcgac
     1321 agcgtcaggc ccttaggaat gtcatcgagt ttcacatctt tcggcaaggt aatggtgatt
     1381 ttttcgagcc gccccgcttc ggtaagcccc cctctgatcc aatggatgtc ggacggcttt
     1441 acaccgtggt catcctcgag aattgcgcgc gcccatacat tagccgtgag ttgatactcc
     1501 ggcacgccga tctttttgcc cttgagatct gccggctttt tgatgcggtc ggtgcgcacg
     1561 taaatggcgg tatggcggaa ggctcgcgag acgaacgccg gcacgccgac ataggggcaa
     1621 ttgccttgcg ccgttttcac cgtgaagctc gacatcgaca attcgcagat gtcgaaatca
     1681 agcgtgcgga aggcgcggaa aaagatttcc tccggcggca gcgtcatgaa cacgggctcg
     1741 acgccgtcga tctgcaccgc gccgtcga
//
LOCUS       DATDHO010000182         1648 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_404943, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000182 DATDHO010000000
VERSION     DATDHO010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_404943"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(438..1469)
                     /locus_tag="VIY07_03470"
     CDS             complement(438..1469)
                     /locus_tag="VIY07_03470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019863552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEY6380845.1"
                     /translation="MEHYVGLDVSLKQTAICVVDQAGRIVCEDVVVSDPEAIETFVKL
                     KAPCAVRIGLETGATTTWLWSELKRKGLPIICIDARHAKAALKMQINKTDRNDAIGIA
                     RIMQCGWFKEVHVKGLESHAIKALLASRALLVKIKRDLENHIRGLLKNLGLVIGRAKF
                     NVFAMRANELIEDRSELAVAVGPLLKAREMVERQIADFDRKVMKLARDDQQVRRFMTV
                     PGVGPITALCFRATIDDPARFKRSRSVGAFVGLTARRHASGEIDWTGRISKCGDAMLR
                     SYLFEAAGVLLTRVPKWSALKAWGMKLAKRNGLIKAKVAVARKLAVILHRMWVDGTEF
                     SWSTKETVA"
BASE COUNT          334 a          513 c          448 g          353 t
ORIGIN      
        1 aataaggagg gctagtccga tgagcaaagc cttatgtcgc attgcgccgc tcccaagaat
       61 cccggagcgc acatcctagt ctgggcgatc cggcccctga aataggcggc atgcccaccc
      121 ggaatgtctg ctcgtggcac agcagacatt gcatccgagc gtcgggaacg ggggctctta
      181 accgatgctg ttctctaatt ccgggactgg gtgtcaagct ctccatgatg ttccttgccg
      241 agcccatggt tctctccgcg gtaggggcac ggccctccgc atgatggcgt aagatgacgc
      301 tggcggatca atgttgaaat cgcggtaacc gtttccgggt ctcgcaagaa atcggacgac
      361 ctcgccatcg ccaccgtccc ggcagggaca tcgcttcccg cctgatgacg ggaactttgc
      421 tctattcctc ctccgcgtta cgcgacagtc tctttcgtcg accagctgaa ctcagttccg
      481 tcgacccaca tgcggtgcag gatgacggcg agtttccgag cgacggccac cttggctttt
      541 atgagtccat tgcgcttggc aagcttcata ccccaggctt tcaacgccga ccatttgggc
      601 acgcgcgtca acagaacgcc ggccgcctcg aatagataac tgcgcaacat cgcgtcgccg
      661 cacttggaga tgcgccctgt ccagtctatc tcgccagatg catgccgcct cgccgtcaag
      721 ccgacaaagg ccccgacact tcgcgatcgc ttgaagcgtg ccgggtcgtc gatggtggcg
      781 cggaaacaga gtgcggtgat tggcccgacg ccgggcaccg tcataaacct gcgaacctgc
      841 tggtcatcgc gagcgagctt catcaccttg cgatcgaagt cggcgatttg ccgctcgacc
      901 atctcgcgcg ccttgagtag cggtccaacg gcgacggcca gctcagaccg gtcttcaatc
      961 agctcgttgg cacgcatggc gaagacattg aacttcgccc gaccaatgac gagaccaaga
     1021 ttcttcagga gcccacggat atggttctcg agatcacgct ttattttaac gagcaaggct
     1081 cggctcgcca gcagagcttt gatcgcgtga ctttcgagac ctttgacgtg aacctccttg
     1141 aaccagccgc actgcatgat gcgcgcgatg ccaattgcat cgttgcggtc ggttttgttg
     1201 atctgcatct tcaaggctgc tttggcgtgc cgcgcgtcga tgcagatgat gggcaagccc
     1261 ttacgcttga gttcactcca aagccaggtc gtcgtcgcac cagtctcgag gccaatacga
     1321 acagcgcacg gagccttcaa ctttacgaac gtctcgattg cctcgggatc cgagacaacc
     1381 acatcctcac agacgatcct cccagcttga tcgacgacgc agatcgccgt ctgcttcaac
     1441 gacacatcca atccaacata gtgttccata cacgctctcc atcgttgcga ggccacatga
     1501 ggatggcctc attgcttcct ggagagctga ttcgccgtac cgtcgtctgg cgcgatcccg
     1561 gaattacccc atgttgaaaa agtgctcgtg attttcggcg aacagtgatt ccgccgcttg
     1621 agacatcagc ggcggaggct tgccatga
//
LOCUS       DATDHO010000183         5754 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_157036, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000183 DATDHO010000000
VERSION     DATDHO010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5754
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_157036"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="VIY07_03475"
     CDS             <1..441
                     /locus_tag="VIY07_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011505161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380846.1"
                     /translation="INLRSSVMAERQQPLPLLLEFNSRVLNWGGTLQYSMPYLKSAVV
                     DLGLPDFINRLIPIVEASFQTPVSNKVTSGTVTTATINPGIIFIGKTYQVGIEAIIPV
                     NRQSGSSVGIIGQLHFYLDDIFPNTIGRPIFANNINTGRPMFGR"
     gene            444..800
                     /gene="copC"
                     /locus_tag="VIY07_03480"
     CDS             444..800
                     /gene="copC"
                     /locus_tag="VIY07_03480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011505162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis periplasmic binding protein
                     CopC"
                     /protein_id="HEY6380847.1"
                     /translation="MRTIITSFFFVLAAAGCAFAHAHLDRASPAVGSTVSSAPKEVVL
                     WFTNQLEPAFSSIEVRNEKGAPVQAGKASVDRRDRTQLHVPLKALSPGTYKVIWRVLS
                     VDTHRTQGDFSFRVGP"
     gene            734..2062
                     /gene="copD"
                     /locus_tag="VIY07_03485"
     CDS             734..2062
                     /gene="copD"
                     /locus_tag="VIY07_03485"
                     /inference="COORDINATES: protein motif:HMM:NF033808.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006825 - copper ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
                     /protein_id="HEY6380848.1"
                     /translation="MACSVGGYAPNAGRFQFSRWSIEPAEAVADGRSADLRARFAATL
                     AACCTVSFLALMVPSVSKPPAGFLPLLDRLTVLIWLALAGAILSAAAWLVLLAANITG
                     ATIAEVCLHGGAWPVLFDTRFGLVFCARLALAVVLALLMDWPAMRMLQLVVAAALIAL
                     LAWVGHAGATPGIAGDVHLVSDIAHLLAAGSWLGALPAFVLLLTNARRDPDWDDFLLR
                     TTQRFSVVAMVSVATLLASGLINSWNLLSGLRDLFTTDYGRLIALKVGVFVAMISVAA
                     VNKFYLTPRLPKPSALRALRRNSLAEIALGLCVLFFVGALGTLAPTAHRHAVPEGIPP
                     GAAFVHIHAPEAMADVMINPGRPGLSEATIRVMGEDLSRFPAKDVWLALEPPQSRGPS
                     LERGAVEEADGAWRVKDIALSEPGIWTVRVTVTSKPGEAILLDAPIVIEP"
     gene            complement(2300..2569)
                     /locus_tag="VIY07_03490"
     CDS             complement(2300..2569)
                     /locus_tag="VIY07_03490"
                     /inference="COORDINATES: protein motif:HMM:NF018978.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1467 family protein"
                     /protein_id="HEY6380849.1"
                     /translation="MSKTTAVAIYFLIWWVTLFAVLPWGVRNQEEGGEIAPGTDPGAP
                     AIHRVWSKLGWTTLVATVIFAILYVIYTQGLIPYDILIAISGPRR"
     gene            complement(2617..3021)
                     /gene="mce"
                     /locus_tag="VIY07_03495"
     CDS             complement(2617..3021)
                     /gene="mce"
                     /locus_tag="VIY07_03495"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006934701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEY6380850.1"
                     /translation="MIGRLNHVAIAVRDIGKASKVYRDTLGADVSDKVAQPDHGVSTV
                     FITLPNTKIELLEPLGADSPIEKFLERNPDGGIHHLCYEVSDILAARDLLKSQGARVL
                     GDGEPKTGAHGKPVLFLHPKDFCGTLVELEQA"
     gene            complement(3044..4708)
                     /locus_tag="VIY07_03500"
     CDS             complement(3044..4708)
                     /locus_tag="VIY07_03500"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEY6380851.1"
                     /translation="MTAQELVFAPLGGVGEIGMNLSIYGLGDERRRTWLAVDLGVSFA
                     AEEHLPGVDLILPDIRYLVEERNNIAGLVLTHAHEDHFGALLDLWPRLKVPVYATPFS
                     AALLEAKCADETGAPKIPVNVVALGSRFNVGPFDIELVTMAHSIPESNALVIRTSAGT
                     VLHTGDWKIDPTPILGDPTDEKKLRALGEEGCLAIVGDSTNAVREGRSPSEADVAKTI
                     AELVKNARGRVAVTTFASNVARLRSVAEAARAADREVVVIGRAMERIVQIARETGYLE
                     GVQDFRSVDAYGYLPPKKVVALCTGSQGEPRAALSRIAEEQHPEVTFSAGDRVIYSAR
                     TIPGNEKAVGRVINLLIEQGVEVITDRTHLVHVSGHPRRAELEDLIGWVKPKVVIPVH
                     GEALHLHEHAALARRCGVRDVVRCRNGDLVQLSPQVRIIDEVPAGRIYKDGTLLVEAD
                     ARTIAERRRLSFAGAISVALSITDRGDMAEGPSLDLIGIPERDREGRSMHEVVHDALV
                     QTFESLPRGLRRDPDSIAEALRRAVRAAVAERWGKKPMCHVHVLPV"
     gene            complement(4705..5466)
                     /locus_tag="VIY07_03505"
     CDS             complement(4705..5466)
                     /locus_tag="VIY07_03505"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEY6380852.1"
                     /translation="MNREATGLAGVRHIAYETLGSTNAEALALARLGERGPLWITARS
                     QTAGRGRRGSQWVSPPGNLYATLLLSEPSPADRAPQLSFVAGLALHDAIAVCAPQLGP
                     HLNVKWPNDLLVRQAKTAGILLEGESDPRFTVVIGFGVNCTTHPDDTDYPATDIAETG
                     ALVAPDALLMALSGAMQRRLAQWDRGRAFAAIRADWIKRAAGLGQALSVRLPGRELSG
                     RFEGLDDEGRLLLDQGGSVIAITAGEVFGFGERSP"
     gene            complement(5467..>5754)
                     /locus_tag="VIY07_03510"
     CDS             complement(5467..>5754)
                     /locus_tag="VIY07_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HEY6380853.1"
                     /translation="PPLAGFFAKFYVFLAAIKAGLFTLAVIGVITSVIGAYYYLAIVK
                     IMYFDEPVRSFQRMPLLLGLILGVSGIANILFFAYPAPLLGAATVAAKSLF"
BASE COUNT         1108 a         1819 c         1724 g         1103 t
ORIGIN      
        1 atcaatttgc ggtcatctgt catggcggaa cgacagcagc cgctacccct gctgctggaa
       61 ttcaactcgc gcgtgctcaa ctggggcggc acgcttcaat acagcatgcc ctacctgaaa
      121 tccgcggtcg tagatctcgg attacccgat ttcatcaatc ggttgatccc gatcgtcgaa
      181 gcctcgttcc agacaccggt gtcgaacaag gtgacgtccg gaacagtgac gaccgccacc
      241 atcaatcccg gtatcatctt tatcggaaag acataccaag taggtatcga ggccataatc
      301 cccgtgaatc ggcaaagtgg cagcagcgtc ggcatcatcg ggcagcttca tttctatctc
      361 gacgacatct tcccgaatac aatcgggcgg ccgattttcg ccaacaacat caacacgggg
      421 agaccgatgt tcggccgcta gtcatgcgca ccatcatcac gagcttcttc tttgtactgg
      481 ctgcggcagg ttgcgctttc gcgcacgctc atcttgatcg ggcgagccct gccgtcggca
      541 gcacggtcag ctcggcgccg aaagaggttg tgctctggtt caccaatcag cttgagcctg
      601 ccttcagcag tatcgaggtg cgtaatgaaa aaggcgcccc ggtgcaggcg ggaaaggcaa
      661 gcgtcgaccg gcgtgaccgt acgcagctgc acgtgccgct caaggccttg tcacccggga
      721 catacaaggt gatatggcgt gttctgtcgg tggatacgca ccgaacgcag ggagatttca
      781 gttttcgcgt tggtccatag aaccagccga ggcagtcgcc gatggccgat ccgctgatct
      841 tcgtgcgcgt tttgccgcga cgttggcggc gtgctgtacg gtgagcttcc tcgcactcat
      901 ggtgccgtcc gtttcgaaac cgccggccgg tttcttgcca ttgctagacc ggctgacggt
      961 gctgatttgg ctggcgctcg ccggtgccat tctgtcggcc gcggcctggc tggtgctgct
     1021 ggcagccaat atcaccggcg ccacgatcgc cgaggtgtgc ctgcacggcg gcgcctggcc
     1081 ggtgctcttc gatacgcgct tcggattggt gttctgcgca cggctggcgc tcgccgtagt
     1141 tttggctctg ctcatggatt ggccggccat gaggatgctt cagcttgtgg tggcagccgc
     1201 gctgatcgcc ctgctcgcat gggtcggcca cgccggagcg acgccgggaa ttgccggcga
     1261 cgtccatctc gtctcggaca tagcgcattt gcttgcggcc gggtcctggc tcggtgctct
     1321 gccggcgttt gtgctccttt tgacaaacgc gcgccgcgac cctgactggg atgactttct
     1381 cctgcgcacg acacaacggt tctccgttgt cgcaatggtc agcgttgcaa cgttgctcgc
     1441 aagcggcctc atcaatagct ggaatttgct cagcggcctt cgcgatctct tcacaacgga
     1501 ctacggccgg ctgattgcgc tcaaagtggg agtgttcgtc gcgatgatct ccgttgccgc
     1561 tgtgaacaaa ttttatctga caccgcggtt gccgaagccc tcggccctgc gcgcgctccg
     1621 ccgcaacagc ctcgcggaaa tcgcgcttgg cctatgcgtg ctctttttcg tcggggcact
     1681 gggaacgctc gcgccgaccg cgcacaggca tgcagtcccc gaaggcattc caccgggtgc
     1741 cgcattcgtc cacattcacg cccccgaggc gatggcggat gtgatgatta atcccggccg
     1801 ccccggacta tccgaggcca ccattcgcgt tatgggggaa gacctttctc gtttcccggc
     1861 caaggatgtg tggcttgcgc ttgagccgcc gcaatcgcgc ggtccaagcc tggaacgagg
     1921 tgccgtcgag gaggccgatg gcgcctggcg ggtcaaagat attgcgcttt cggaacccgg
     1981 tatctggacc gtgcgggtca cggttacctc caaaccgggg gaagccatcc tgctcgacgc
     2041 ccctatagtg atcgagccct gaatcacaaa atttgctgac aggcttccaa cgatcggcta
     2101 gcgtcccgca gcccgtacga gcggaacctg ggcgcaagac cggttccaaa cctgcggtcc
     2161 aagtcttggg agagaagcaa agtccggcgc gataaccgcg gccatcccgg cagcaaaaaa
     2221 agatcaacaa acgtcgggag aaggacgaca ccaatccgag agcagggttt cagccctgct
     2281 ctcttttttt tgggcctgtt cagcgacggg ggccggatat ggctatgagg atgtcgtagg
     2341 ggatcaagcc ctgcgtgtag atcacgtaga gaattgcgaa aatcacagtg gccacgagcg
     2401 tggtccagcc cagcttgctc cacacgcggt ggatcgccgg cgcgccggga tcagtgcccg
     2461 gcgcaatctc gccgccttcc tcctgattgc gcacacccca aggcagcact gcaaacagcg
     2521 tcacccacca gatcaggaag taaatcgcga cggcggtggt cttgctcatc gtatgaccaa
     2581 cggtttgcgc cttcggcgtg caaacagtgc actgcgttag gcctgttcaa gttcgaccag
     2641 cgtgccgcag aaatccttcg gatgcagaaa gagaaccggc tttccgtgag caccggtctt
     2701 cggctcgccg tcgccaagga cgcgggctcc ttgcgatttg aggaggtctc gggcggcaag
     2761 aatgtccgac acttcatagc acagatgatg gattccgccg tcgggattgc gctcgaggaa
     2821 tttttcgatt ggagagtcgg cgcccaacgg ctcgagaagc tcgatcttgg tgttgggcag
     2881 cgtaataaaa accgtggaca cgccatggtc gggctgcgcc accttgtccg aaacatcggc
     2941 gcccaaggtg tcgcgataga ccttcgaggc tttgccaatg tcccgaacgg cgatggcaac
     3001 gtgattgagg cgaccaatca tgattgtcct ggctccacgc tcatcatacc ggcaagacat
     3061 gcacatggca catcggtttc ttgccccagc gctcggcaac tgcggcgcgg acggcacgac
     3121 gaagtgcctc tgctatcgaa tctggatcgc gcctgaggcc tcgcggcaag gactcgaagg
     3181 tctgcaccag cgcatcgtgc acaacctcgt gcatggagcg gccctcgcgg tcgcgctccg
     3241 ggatgccgat cagatcaagc gagggaccct cggccatgtc gcccctgtcg gtgatcgaaa
     3301 gcgccacgga tatcgcgccc gcaaaactga gcctcctgcg ctcggcgatg gtgcgggcgt
     3361 cggcttccac caaaagcgtg ccgtccttgt agatgcgacc agccggcact tcgtcaatta
     3421 tgcgcacttg aggcgagagc tgcaccaggt cgccattgcg gcaccggacg acatcgcgca
     3481 ccccgcagcg tcgcgcgagc gcggcgtgct catgcaggtg aagcgcctcg ccgtgcacgg
     3541 ggataacgac cttcggtttc acccagccaa tcaggtcttc aagctcggca cggcgtggat
     3601 ggcccgagac gtggaccaga tgggtccgat cggtgattac ttcgacaccc tgctcgatca
     3661 gcaaattgat cacgcgcccg acggcctttt cgtttccggg aatggttcgg gccgaataga
     3721 tcacccgatc gcctgcagaa aatgtcactt cggggtgctg ttcttcggca atgcgcgaaa
     3781 gtgcggcccg cggctctccc tggctaccgg tgcacaacgc gacgaccttt ttcggcggca
     3841 gatacccata ggcatcgacg gaacggaaat cttgcacgcc ctcgagataa ccggtttcgc
     3901 gcgcgatttg cacaatgcgc tccattgcac gtccaatcac aacgacctcg cggtccgcgg
     3961 ccctggccgc ttccgctacg gaccggagac gggcaacgtt cgaggcaaac gtcgtcaccg
     4021 caacacgccc tcgggcattc ttcacgagct cggcgatcgt tttggcgacg tcggcttccg
     4081 agggcgatcg gccctctcgc accgcgttcg tcgaatctcc cacgatcgcg aggcagccct
     4141 cctcgcccaa tgcacgcaat tttttctcgt cggtcggatc gcccagaatc ggcgttggat
     4201 cgattttcca gtcgccggtg tgcagcacgg tgccggcaga tgtccggata accagcgcgt
     4261 tcgactcagg aattgaatgc gccatcgtca ccaactcaat gtcgaacggc cccacattga
     4321 accggctgcc cagtgccacg acattcaccg ggattttcgg cgcacctgtc tcatcggcac
     4381 acttggcttc aagcaacgcc gcgctgaagg gggtcgcgta gaccggcacc ttcagacgcg
     4441 gccacaggtc gagcaatgcc ccgaaatgat cctcgtgcgc atgagtgaga accaagccgg
     4501 cgatgttgtt gcgctcttcc accaggtagc gaatgtcggg gaggatcaag tcaacgcccg
     4561 gaagatgctc ctccgcggcg aaggacacgc caaggtcgac agccagccag gtgcgccggc
     4621 gttcgtcgcc gagaccgtaa atcgacagat tcatgccgat ctcgccgacc ccgccgagcg
     4681 gcgcaaacac cagttcctgc gcagtcatgg cgagcgctcg ccaaagccga agacttctcc
     4741 ggcggtgatc gcgatcacac tgccgccctg atcgagcaac aggcggccct cgtcatcgag
     4801 gccctcgaag cggcccgaca gttcgcgacc aggcaggcgc acgctaagcg cttggccgag
     4861 gccggccgct cgcttgatcc aatctgctct gattgccgca aaggcgcggc cgcgatccca
     4921 ctgtgcgagg cgccgttgca tcgcgccaga cagcgccatc aacagggcat ccggtgcaac
     4981 gagcgcaccc gtttccgcaa tatctgtcgc ggggtaatcg gtatcgtccg gatgtgtcgt
     5041 gcagttgacg ccgaatccga tcacgaccgt aaaacgaggg tcgctttcac cctcgagcaa
     5101 aattccggcg gtttttgctt gcctcacaag cagatcgttg ggccatttta catttaagtg
     5161 gggccccaac tgcggcgcac agacggcaat cgcgtcatgc aatgccagcc cggcaacgaa
     5221 cgacagttgc ggggcgcgat ccgcaggcga cggttcgctc aacaacaggg ttgcatagag
     5281 gttgcccggc ggcgaaaccc attgactgcc gcggcgtcca cgaccggcgg tctggctgcg
     5341 cgccgtgatc cacaatgggc cgcgctcgcc caagcgcgca agcgccagcg cctcggcgtt
     5401 cgtcgagcca agggtttcgt aggctatgtg ccggaccccc gccaggcccg tggcttcgcg
     5461 gttcattcag aacagtgact tcgccgcgac cgtcgccgcg cccaggagcg gcgccggata
     5521 ggcgaagaac aggatatttg cgatccccga cacgcccagg atcagcccga gcaacagcgg
     5581 catgcgctga aaactcctga ccggctcgtc gaaatacatg atcttcacga tggccagata
     5641 gtagtacgcg ccgatcacgc tggtgatcac cccaatgacg gcgagcgtaa aaagcccggc
     5701 cttgatggcg gcaaggaaca catagaattt cgcgaagaag ccggcgagcg gcgg
//
LOCUS       DATDHO010000184         4228 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_8382, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000184 DATDHO010000000
VERSION     DATDHO010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4228)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4228)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4228
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8382"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..362)
                     /locus_tag="VIY07_03515"
     CDS             complement(<1..362)
                     /locus_tag="VIY07_03515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6380854.1"
                     /translation="MRSFVRALSLLIVCSLLLSACFRAASDESADTLLTGGKVYTFNW
                     DDPATDGAPAKNAPYSSAVWKPDAEAIAVRGSRIIFVGSSRDAEKYRGAQTRVIDLQG
                     ATVIPGLIDSHTHVAGLG"
     gene            809..1867
                     /locus_tag="VIY07_03520"
     CDS             809..1867
                     /locus_tag="VIY07_03520"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6380855.1"
                     /translation="MNTETLPYNRREFLGASLSLATTCFASNQIPNAETPGKIAVGFL
                     GVGYSHFMDKHKLISESKDWRLVGLCEEDTAVRAKGPDGARWLSAEQLFAEAEVIVVE
                     SAVKDHARDAKRALLAGRHVHVEKPPADTMEGFRELIRLAGERKRLLQIGYMWRYNPG
                     INAALEAARKGWLGDVYLVRATMNTQVGPEQRREWARFRGGAMFEQGCHLIDALVRLL
                     GKPIKVTPHLKHSAGDDLLADNTVAVFEFPRALGVITSAPLQPNAGPHRFFEALGANG
                     IVRVQPLEPPTLTIELAKAAGPYVAGKQEVKLPSYRRYVDEFVALADSLREGKPLPFA
                     AEVELNVQEALMRACEML"
     gene            2087..3889
                     /locus_tag="VIY07_03525"
     CDS             2087..3889
                     /locus_tag="VIY07_03525"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone-dependent
                     dehydrogenase"
                     /protein_id="HEY6380856.1"
                     /translation="MRYSSLTQINRGNVTQLQRAWTYHTGEIALGLGKGGSRVTAFQS
                     TPLVTDGILYLSTPSNRVIAVDAETGAEQWQFDPQAGTAKRRFQSHRGVAYWEGPSSK
                     GDGKEKRILFGTSDARLIALDATNGKPCPEFGTAGAVDLRKGVADNWQTSSYGVTSPP
                     AIYKNLVIMGAGVPEGPSKGPSGDVRAFDVRTGKLVWRFHTVPRPGEPGHNTWEGDSW
                     QDRTGVNVWSIMTVDVEQGMVFLPLGSAAYDFYGADRKGQNLYANSLVALNAATGKLV
                     WHYQMVRHDIWDYDLPAHPNLITVRRHGRTIPAVAQVTKMGLVFVLDRRTGKPLFPVE
                     DKIVPRSKVPGEATWPTQTVPVKPQPLARHKPLTREELNQVTPESKKYCAELFNQVVS
                     GGLYTPAGLEMTLWWPGTLGGATWSGASFDPKSGYLYVNVNEIGAVGAMKAQDAGAET
                     TYRRSSPWGAYARFWDQNEYPCQQPPWGTLNAVNLNTGEIAWRVPLGQVDELMEKGVP
                     PTGTPNLGGTIVTAGGLVFIGGANDSRFRAFDAQTGKELWTAMLDASGHATPITFQGR
                     KSGRQFVVIAAGGGGYFSKTYADALVAFALPIKP"
BASE COUNT          920 a         1247 c         1254 g          807 t
ORIGIN      
        1 tcaccgagcc cggcgacgtg cgtgtgagaa tcaatcagac ccggaatcac cgtcgcgccc
       61 tgcagatcaa tcacgcgagt ctgcgcgcca cgatattttt cggcatcgcg cgagcttccg
      121 acaaaaatga tccgcgaccc gcgcacggca atcgcttcgg cgtcgggctt ccagaccgcc
      181 gatgaatacg gcgcattctt cgctggcgcg ccatcggtcg cgggatcgtc ccagttgaag
      241 gtgtagacct tgccgcccgt gagcaaggta tcggccgatt catcgctcgc agcgcgaaag
      301 caggctgaga gaaggagact gcaaacgatg agtagcgata atgcgcgaac gaacgacctc
      361 atgatcggtc ctccgatagt taatgtcgca gaagccatgc aaaagcactc ctggcaaatg
      421 attaccaggc agataagaag gataattgag gcactgaagg cgttaaagca taacccctga
      481 gcgagccggg ggcgtggtct acttctcctg gccccgcaag ctaaggcgcg gaaaattcat
      541 tgcgcctgca acaagccagt cctatactca accccggctc gcactcaatg gacatgaaag
      601 cattaattag gaagaggttc tcgatcaccc tctgatgagt gatggcttgg ccacagatcg
      661 cgtcctccct ctatctcggc gaccccgaaa ttgactgtga aactgggcga aagccaggat
      721 gtgcggggcg ccaaaatgac cgagccgcgc aagatcaata ctgcgcttgc gcgcggaaat
      781 caggcgataa ggaatggtaa taacgagtat gaacacagaa acattaccct acaatcggcg
      841 tgaatttctt ggcgccagcc tctcattggc cacgacttgt tttgcctcaa accagatccc
      901 aaacgcggaa acaccaggaa aaatcgcagt tggctttctc ggcgttggtt attcgcactt
      961 catggacaag cacaagctta tttccgaatc gaaagactgg cgcctcgtcg gcctttgcga
     1021 ggaagacacc gccgtgcgcg ccaaagggcc ggacggcgcg cgatggctct ccgccgaaca
     1081 actcttcgct gaagccgagg tcattgtggt cgaatcggca gtcaaggatc acgcgcgcga
     1141 tgcgaagcgg gctttgcttg cgggccggca cgttcacgtc gaaaagcctc cggcggacac
     1201 aatggaaggc tttcgcgaac tgatccggct tgccggtgaa aggaaaaggc tgctgcagat
     1261 cggttacatg tggcgttaca atccgggcat caatgccgcg ctcgaagccg cacgcaaagg
     1321 atggctgggc gatgtgtatc tcgtgcgcgc cacgatgaac acgcaagtcg gcccggagca
     1381 gcggcgcgaa tgggcgcgct tccgcggcgg cgcaatgttc gagcagggtt gtcatctcat
     1441 cgacgcgctt gttcgattgc tcggcaagcc aatcaaggtc acaccacacc tcaaacattc
     1501 cgccggcgat gatttgttag cggacaacac agtcgctgtc ttcgagtttc cgcgggcgct
     1561 cggcgtcatc accagcgcgc cgctccaacc gaacgccgga ccgcatcgct ttttcgaggc
     1621 gctcggcgcg aatggcatcg tccgcgtgca gccgctcgaa ccgcctacgc tcacaatcga
     1681 actagccaag gctgccggcc cctatgtcgc cggcaaacag gaagtgaaat tgccgtctta
     1741 ccgtcggtac gtggatgagt tcgtcgcgct ggcggattcg cttcgagaag gcaaaccgct
     1801 gccattcgca gcggaggtag agttgaatgt gcaggaggct ctcatgcgcg cgtgcgagat
     1861 gttatgaatc aactgccgct ttcttcttcc cgcggcgctg cgccgatcct gcatggtctg
     1921 atttcaataa ccaatcgcaa tatatggagg agcgatgaac tgtaacaacc gggggtccat
     1981 aaacaaccta ttcttgtttc tcgtgatccc gattcttgcc ttcgggcaat ccccggctcc
     2041 ggccgcgcac tatgaatggc gctcttacgg caatgatccg ggcggcatga ggtactcttc
     2101 gttgacgcag atcaatcggg gcaacgtgac acaactccag cgcgcctgga cctatcacac
     2161 aggagagatc gctttgggcc tgggcaaggg aggctcgcga gtgaccgcgt ttcaaagcac
     2221 tccactcgtc accgacggga tattgtatct ctcaactccc tccaaccgtg tgattgctgt
     2281 ggacgccgag accggcgcgg aacaatggca gttcgacccg caggcaggaa ccgcaaagcg
     2341 gcgattccaa tcacaccgcg gtgtcgctta ctgggaaggg ccatcgagca aaggggatgg
     2401 caaggaaaaa cgcatcctgt tcggcacatc cgacgcgcgt ctgatcgccc tcgatgcgac
     2461 gaatggcaaa ccgtgtcctg agtttgggac cgcgggcgcg gtcgatttac gcaaaggcgt
     2521 ggcggacaat tggcagacct cttcctacgg tgtgacttct ccgccggcca tctacaagaa
     2581 tcttgtgatc atgggagcgg gagtccccga gggaccttcg aaaggcccga gcggggacgt
     2641 acgcgctttc gacgttcgca ccggcaagct tgtttggcgt ttccatacgg tcccgcggcc
     2701 gggcgagcca ggtcataaca cctgggaagg cgattcgtgg caggaccgga caggcgtcaa
     2761 tgtctggtcg atcatgacgg ttgatgtcga gcaaggaatg gtcttcctgc ccctcggttc
     2821 ggccgcgtat gatttttacg gcgctgaccg taaagggcaa aacctctatg cgaactccct
     2881 ggtggcgttg aacgcagcga cgggcaagct cgtctggcat taccagatgg tgcgccatga
     2941 catttgggat tatgacctgc cggctcatcc gaacctgatc acagtccgcc gccacggccg
     3001 cacgattccg gccgtggcgc aggtgacgaa gatgggcctg gtcttcgtgc tggaccggcg
     3061 aactggcaag ccgctctttc cggtcgaaga taagatcgtt ccgcggagta aagtccccgg
     3121 cgaggccacc tggccgacgc agaccgtccc cgtcaagccg cagccgctgg cccgccataa
     3181 gcccctcacc cgcgaggaac tcaaccaggt cacgccggag tcgaagaaat attgcgctga
     3241 gttgttcaac caggtagtca gcggcggcct gtacacgccg gccgggctgg aaatgacgct
     3301 ctggtggccc ggcacgctcg gcggggcgac ctggtcgggc gcgtccttcg atccgaagtc
     3361 gggctatctc tacgtcaacg tgaacgagat cggcgccgtc ggcgcgatga aagcgcagga
     3421 tgccggcgcg gagactactt accggcgctc aagcccgtgg ggcgcctacg cccgcttctg
     3481 ggatcaaaac gagtacccct gccagcagcc gccctggggc acgctcaacg ctgtcaatct
     3541 gaacacggga gagatcgcct ggcgcgtgcc gctcggccag gtggatgagc ttatggagaa
     3601 aggcgtcccg ccaacgggca cacccaacct gggcgggacg atcgtaacgg caggcggcct
     3661 ggtctttatc ggcggcgcaa atgacagccg ctttcgggcc ttcgacgctc agactgggaa
     3721 agaactctgg acggcaatgc tcgatgcgag tggtcatgcc actccgatta cttttcaggg
     3781 caggaagagt ggccggcaat tcgtcgttat tgcggctggt ggtggcggat atttcagcaa
     3841 gacttacgcc gatgccctgg tcgcatttgc cctgcctatc aaaccgtgac tattccagtt
     3901 taggaggact tccgcatgcc gctcaagaag tacggcgtct tgaaagggac cgctctcggc
     3961 catcttcgtg acgccgacga tgaccactac cagatcctga tcaaagccgg ctcttgatgc
     4021 tgagccgatc cgagtcgaaa gataaattat ctccgtcgct accaagccga tttgaagatg
     4081 atgggcgatc ggcgccaata cactatactg gcgcgaaggg gttagctgtc gaaactgcgg
     4141 aaacgagcat cgaaaacatg ggccatctgc gccgcggtag aaataaggcc cgagttcaaa
     4201 atcctcgccg ctctcgctca ccatgact
//
LOCUS       DATDHO010000185         2153 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_305866, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000185 DATDHO010000000
VERSION     DATDHO010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2153
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_305866"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..217
                     /locus_tag="VIY07_03530"
     CDS             <1..217
                     /locus_tag="VIY07_03530"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEY6380857.1"
                     /translation="DEIMVIGGGDIFAATMEMADRLEITQVHASPEGDAVFPAIDPEV
                     WQEISREDHYAGPDDDASFTLVTYVRR"
     gene            332..1474
                     /gene="hflK"
                     /locus_tag="VIY07_03535"
     CDS             332..1474
                     /gene="hflK"
                     /locus_tag="VIY07_03535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HEY6380858.1"
                     /translation="MPWTNQGGGGGGPWGGGGRGPWGSGPQSPGSTPPDLEEILRRGQ
                     DRLRRVLPGGNLGGRGLALIFLGALALWGFSGFFRVEPDELGVVLRFGKEVREVQPGL
                     NYHLPYPIETVLTPKALRVNKIDIGMRVVDDIRRGGTTVRDVPEESLMLTGDENIVDV
                     DFSVLWKVKPTGVGAFLFNIQNPEGTVKAVAESAMREVIGRSEIQPILTGARQTIETA
                     VQDLMQKTLDHYGAGVVVQQVQLQKVDPPAQVIDAFRDVQAARADLERAVNEAQTYAN
                     RVVPEARGRVAQITQAAEAYRQQTVAEATGQTSRFLKIYEQYKKAPDVTRERMYLETM
                     ERVLGGTDKIILDPNSAGSGVVPYLPLGELSRPPQTRPQPQAGGRQ"
     gene            1471..>2153
                     /locus_tag="VIY07_03540"
     CDS             1471..>2153
                     /locus_tag="VIY07_03540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEY6380859.1"
                     /translation="MRLGFFGGILAVLIVAALIVAYSSLFTVYQTQQALVVRLGQPVR
                     VVNEPGLNFKAPFIDSVVYLDKRILDLESPSQEVIASDQKRLVVDAFARYRIQDALRF
                     YQTLGSIAGANSQLSILLNSGLRRVLGEVTFTHVVRDQRAELMARIRELVDREATAYG
                     IQVVDVRIRRADLPEQNSQAVYQRMQTERQREAAEFRAQGAQRAQEIRSRADREVTVL
                     VAEATSKSE"
BASE COUNT          413 a          638 c          698 g          404 t
ORIGIN      
        1 cgatgaaatc atggtaattg gcggcggcga tatcttcgct gcgacgatgg agatggccga
       61 ccgccttgaa atcacccagg tgcatgcatc gccggagggg gatgccgtgt ttccagcgat
      121 cgatccggag gtttggcagg agatatcgcg cgaggatcac tatgccggcc cggacgacga
      181 tgccagcttc accctggtca catatgtaag acgttgaatc cccagttaat cgcggcatct
      241 gaacgcgttg taacggggct tggcgtcccc tataaccgct cccaactgaa acaagccggg
      301 cggaaatagc ccgcgcggga ggcctaattc gatgccttgg acaaatcagg gcggcggcgg
      361 aggaggacct tgggggggcg gtggcagggg cccttggggt tccgggccgc aatcgccagg
      421 ctcaactcca cccgatctgg aggaaatcct ccgtcgcggg caggacagac tgcggcgcgt
      481 gctgcccggc ggcaatctcg gcgggcgcgg tctcgcactc atttttcttg gtgcgcttgc
      541 cctctggggt ttttccggat ttttccgcgt cgaaccggac gaactgggtg ttgtcttgcg
      601 cttcggcaag gaagtgcgcg aggtacagcc cggcctgaac taccatctgc catatcccat
      661 cgaaacggtg ctcacgccca aggctctgcg cgtgaacaag atcgatattg gcatgcgggt
      721 ggtggacgac atccggcgcg gcggaactac tgtgcgcgac gttccggaag agagtctgat
      781 gctcaccggc gacgagaaca tcgtcgacgt cgacttctcg gtgttgtgga aagtgaagcc
      841 gacgggagtc ggcgcatttc ttttcaacat ccagaatccg gaaggcaccg tgaaggcggt
      901 ggcagaaagt gcgatgcgag aggtgatcgg ccgctcggag atccagccga ttctcaccgg
      961 ggcgcggcag accatcgaga cagctgtcca ggacctgatg cagaagactc tcgatcatta
     1021 cggcgcggga gtcgtcgtgc agcaggtgca gttgcagaag gtcgacccac cggcgcaagt
     1081 gatcgacgcg ttccgcgatg tacaggctgc gcgcgccgat ctcgagcgtg ccgtcaacga
     1141 ggcgcaaaca tacgccaacc gggtcgtgcc ggaagcgcgc ggccgggtgg cacagatcac
     1201 gcaagctgca gaggcgtatc gccagcagac cgttgccgag gcgaccggcc agacgtcgcg
     1261 cttcttgaag atctacgaac agtacaagaa ggcgccggac gtcacccgtg agcgcatgta
     1321 tctggagacc atggagcgcg tcctcggcgg cacggacaag atcatcctgg atccgaattc
     1381 tgccggcagc ggcgtcgttc catatttgcc gctcggcgag ctctcccggc cgccacaaac
     1441 acggccgcag ccacaggcgg gaggtcggca atgagactgg gttttttcgg cggtatcctc
     1501 gcagtcctca tcgtggccgc gctgatcgtc gcttactcgt ctttgttcac cgtttatcag
     1561 acgcagcagg cgctggtggt ccgccttggc cagccggtcc gtgtggtcaa cgagcccggt
     1621 ctcaacttca aggcaccgtt catcgactcg gtcgtctatc tcgacaaacg tattctcgat
     1681 ctggagtcgc cgtcccagga agtgattgcc tctgaccaaa agcggctggt ggttgacgcg
     1741 ttcgctcggt accgcatcca ggacgcgctg cgcttctacc agacgctggg ctcgatagcc
     1801 ggcgccaatt ctcagctctc aatactgctc aattcgggtc tgcgccgcgt gttgggcgaa
     1861 gttacattca cgcacgtcgt gcgtgatcag cgcgctgaat tgatggcgcg cattcgcgaa
     1921 ctggttgacc gcgaagcgac tgcctatggc atccaggtag tggacgtgcg catccgccgc
     1981 gccgacctgc cggagcaaaa cagtcaggcc gtctatcagc gcatgcagac cgagcggcag
     2041 cgcgaggcgg cggaattccg tgcgcagggc gcgcagcggg cacaggagat acgttctcgt
     2101 gccgatcgtg aagtcaccgt cctggtcgct gaggcgacct cgaagtcgga gca
//
LOCUS       DATDHO010000186         3134 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_56973, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000186 DATDHO010000000
VERSION     DATDHO010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3134
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56973"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..200
                     /gene="pyrH"
                     /locus_tag="VIY07_03545"
     CDS             <1..200
                     /gene="pyrH"
                     /locus_tag="VIY07_03545"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028934.1"
                     /note="Catalyzes the phosphorylation of UMP to UDP;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEY6380860.1"
                     /translation="KKDPKAKRYDRLSHQEAIEKDLRVMDGAAFALARENRMPIIVFS
                     LAERGAIEAVLRGKGRATVVG"
     gene            255..821
                     /gene="frr"
                     /locus_tag="VIY07_03550"
     CDS             255..821
                     /gene="frr"
                     /locus_tag="VIY07_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEY6380861.1"
                     /translation="MANATTHDINEIKRRMQGASSVLKTELSGLRTGRASAHLLDPVM
                     VDAYGAQMPLNQVATVSVPEPRLISVNVWDRSLVHPVEKAIINSNLGLSPATEGQTIR
                     LRIPELNEERRKELVKVAHKYAETARVAVRHVRRDAMDVVKKLEKDHKISKDDHDRFS
                     IEIQKATDAGIAEIDHMLASKEKEILTV"
     gene            833..1588
                     /locus_tag="VIY07_03555"
     CDS             833..1588
                     /locus_tag="VIY07_03555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEY6380862.1"
                     /translation="MSEAELQQSSPTAFDVPRHVAIIMDGNGRWAAGRGLPRAEGHRR
                     GVEALRRTIRAAGEMGIRIVTIFSFSAENWSRPASEVGELMGLLRRFVRNDLAELHKS
                     NVRVRVIGERTGLEPDIGRLLVEAEELTKNNDGLILVVAFNYGARQEIVRAAQRVAQA
                     VKQGELGLSDIDMDLLGRFLDAPDIPDPDLIIRTSGEQRLSNFLLWQAAYSELVFVPT
                     YWPDFDRATLESAIREYQQRERRFGGLVAQTGS"
     gene            1594..2451
                     /locus_tag="VIY07_03560"
     CDS             1594..2451
                     /locus_tag="VIY07_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-archaeol synthase"
                     /protein_id="HEY6380863.1"
                     /translation="MVDVKPVSNSDSKRLSGSNLALRVLSALVLGPLALLTAWVGDWP
                     FALFWIVAAVAVLWEWSALVVGSLHRLMFSSAAGAIAVAGVLTWLTKPVVALLMVGLG
                     ALAAAIFAPVERRVWVTLGVGYAGAMLLAPMLLRADNTYGFAVIVLLFAIVWTTDVLG
                     YFAGRAFGGPKLLPAVSPNKTWSGAIAGTGGAMVVALLVASLFGSFNVLAILIIAFVL
                     SVLAQIGDLFESWVKRQFGAKDASQLIPGHGGVMDRLDGFWAAAVAACVIGILRGGFD
                     GPARGLLLW"
     gene            2513..>3134
                     /locus_tag="VIY07_03565"
     CDS             2513..>3134
                     /locus_tag="VIY07_03565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEY6380864.1"
                     /translation="MTILGATGSIGASTLDLIKRAPHRYRVESISARRNAAALGKIAR
                     EVGARHAVVADHAAYSELKEALSGTRIEAASGEDALVEAAQRPADWVMAAISGSVGLK
                     PTLAAIERGATVALANKECLVCAGGLFMRRAASTGATVLPVDSEHNAVFQALAAGNRA
                     DVRRAILTASGGPFRTWSKEAIKAATPEQALRHPNWVMGPKVTIDSA"
BASE COUNT          593 a          889 c         1007 g          645 t
ORIGIN      
        1 ccaaaaagga ccccaaggcg aaacgctacg acaggctcag ccaccaggag gcaatcgaga
       61 aggacctgcg ggtcatggat ggggcggcct tcgcgcttgc ccgggaaaac cgaatgccta
      121 tcatcgtgtt ttctctcgcg gagaggggcg ccatcgaagc cgtgctacgc ggcaaggggc
      181 gcgcaactgt cgtcggctga tccggcgtgg cattgcgccg cacaaaaaat ggatgcggca
      241 ttcgaggaat tgccatggca aacgcaacaa cgcatgacat taacgagatc aagcgccgca
      301 tgcagggcgc aagcagtgtt ctgaaaacgg aattgtcggg gctgcgcacc ggacgcgctt
      361 cagcgcattt gctcgatccg gtcatggtcg acgcctacgg cgcgcagatg ccgcttaatc
      421 aggttgcaac cgtgagcgtt cccgagccgc gactaatctc ggtaaacgtc tgggatcgtt
      481 cgctggttca ccccgtcgaa aaggcgatca tcaattcaaa tctcggtctt tcgccggcga
      541 cggagggcca aactattcgc ctgcgcatcc ccgagctcaa tgaggagcgg cggaaggaat
      601 tggtcaaggt cgcgcacaag tatgcagaga ccgcccgggt cgccgtgcga catgtgcgcc
      661 gcgacgccat ggacgtcgtc aagaagctgg agaaggatca caagatcagc aaggacgatc
      721 acgatcgctt ttcgatcgag attcagaagg caaccgatgc cggcatcgcc gagatcgatc
      781 acatgctggc ttcaaaagaa aaggaaatcc tcacggtctg aggttgcact gcatgtccga
      841 ggccgaattg cagcagagtt ctcccacggc tttcgacgtg ccgcgacatg ttgcaatcat
      901 aatggatggc aatggccgct gggcggcggg tcgcggactg ccgcgcgctg aaggacaccg
      961 gcggggagtc gaggcgctcc ggcgcacgat tcgcgctgcc ggcgagatgg gcatcaggat
     1021 cgttacgatt ttttccttca gcgctgaaaa ttggtcgcgg ccagcgagcg aagtcggcga
     1081 gctcatggga cttctccgtc gcttcgtgcg aaatgacctg gccgaactac acaaaagcaa
     1141 tgtccgcgtg cgcgtgattg gggaacggac ggggctcgag cccgatatcg gcaggttgct
     1201 ggtggaggct gaagagctca ccaagaataa cgacgggctg atattggtgg tggctttcaa
     1261 ctatggggcc agacaggaga tcgtgcgggc ggcccagcgt gttgcccagg ctgtgaagca
     1321 gggcgaactc ggcctttccg atatcgatat ggatttgctc ggccgttttt tggatgcgcc
     1381 cgacattccc gaccccgatc tcatcatccg cacgagcggc gaacaacgcc tctccaattt
     1441 cttgctctgg caggcggcat acagcgagct ggtatttgtg cccacgtatt ggcccgattt
     1501 cgaccgggcg acgctcgaat ccgcaatccg cgaataccag caacgcgagc ggcggtttgg
     1561 cggtctcgtc gcacaaaccg gatcctgaat ctcgtggttg acgtgaagcc cgtttcgaac
     1621 tcggacagca agcggctgtc ggggagcaat cttgcgttgc gcgttctctc cgccctggtg
     1681 ttgggcccgc tcgcgctgct gacagcctgg gtgggagact ggccgttcgc actattttgg
     1741 atcgtggccg cagttgccgt gctttgggaa tggagcgcgc tcgtcgtcgg cagcttgcac
     1801 aggctgatgt tttcttccgc cgcgggagcc atcgctgtgg ctggtgtcct gacctggctg
     1861 actaaaccgg tcgttgcttt gctgatggtt ggtctcggtg cgctggccgc agccattttt
     1921 gctccggtcg aacgccgtgt atgggtgacg ctcggcgtcg gatatgcggg tgccatgctg
     1981 ctggcgccaa tgcttttgcg tgccgacaac acctacggtt ttgctgtcat cgttttgctg
     2041 ttcgcgatcg tttggacaac cgatgtcctt ggctatttcg cgggtcgggc tttcggcgga
     2101 ccgaaattgc tgcccgcggt gagtccaaac aaaacctggt ccggcgcaat tgccggcacg
     2161 ggcggggcga tggttgtcgc gctccttgtc gcaagtctgt tcggctcatt caatgtgctt
     2221 gcaattctca tcattgcatt tgtgctatcg gtgctggccc aaattggcga tttgttcgaa
     2281 tcctgggtga aaagacaatt tggcgccaag gatgccagcc agcttattcc cggtcatgga
     2341 ggcgtgatgg acagattgga cggtttttgg gcggccgcgg ttgccgcctg cgttatcgga
     2401 attttgcgcg gcggattcga tgggcccgcg cgcggcctgt tgctatggta agtgcatgac
     2461 agccatcgac gtcgcgcgtt caagttcgca atctgccgcc tagggtcgtg cgatcacgat
     2521 cctcggagcg accggttcaa ttggcgccag cacgcttgac ctgatcaagc gtgctccgca
     2581 ccgatatcgc gtcgagtcga tcagtgcgcg tcgcaacgca gcagccctcg gaaagattgc
     2641 ccgtgaagtt ggcgcccgac atgcggtcgt tgccgatcac gccgcatact ccgagctgaa
     2701 ggaggcgctt tccggcacgc gcatagaagc cgcgtccgga gaagatgcat tggtggaggc
     2761 ggcgcaacgc ccggctgact gggtgatggc ggcgatcagc ggttcggttg gactgaaacc
     2821 gacacttgcc gccatcgaac gtggcgcgac ggtcgccctc gccaacaagg aatgccttgt
     2881 ttgcgcgggc gggcttttca tgcgacgcgc ggcaagcacg ggcgcgacgg ttctcccggt
     2941 cgattccgag cacaatgcgg ttttccaggc gctcgcggcg ggcaatcgcg ctgacgtgcg
     3001 gcgagcgatc ctcactgcat ccggtggccc atttcgaacc tggtccaagg aggccatcaa
     3061 ggcggcgacg cccgaacagg cgctgcgtca tccaaactgg gtgatgggtc caaaggttac
     3121 gatcgattca gcga
//
LOCUS       DATDHO010000187         1707 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_405084, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000187 DATDHO010000000
VERSION     DATDHO010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405084"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            208..660
                     /locus_tag="VIY07_03570"
     CDS             208..660
                     /locus_tag="VIY07_03570"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY6380865.1"
                     /translation="MKIELRNSKDFWAGLMLIAIGATSIFIARGYPFGSTMRMGPGYF
                     PSLLGGILALFGIYVLIIGLRRGEKITVHCSTRALIVLPISLVAFGVLMTHAGFIPAM
                     AVLIFGSASAGRDFKFVEVLLLTVILAGLSVAIFIWGLGLPYPLIKGF"
     gene            671..>1707
                     /locus_tag="VIY07_03575"
     CDS             671..>1707
                     /locus_tag="VIY07_03575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014762986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY6380866.1"
                     /translation="MELFNHLIFGFSVALSVQNLLYCFIGVLVGTLIGVLPGIGPLAT
                     IAMLLPLTFNVPPVAAMIMLAGIYYGAMYGGSTTSILVNLPGETAAVVTCIDGYQMAR
                     QGRAGAALAIAAIGSFFAGTVCTLLIALFAPPLGEFALKFSSAEYFSLMLMGLVAAAV
                     LSHGNMVKSLAMVVVGLLFGIVGADVNSGIKRFAFGFYELADGIGVVTIAVGVFAVGE
                     ILSNLSDPEERQVFTSKVTNLFPTKDDLKRSFGAIVRGTGVGAFFGVLPGTTPAIASF
                     SSYMVEKKLARDPSRFGHGAIEGVAGPESANNADAQCKFIPMLTLGIPASGTMALMLG
                     ALMIYGIAPGP"
BASE COUNT          318 a          475 c          517 g          397 t
ORIGIN      
        1 cggctgtaca aggaaatttc ggctatcctg agctcggcgg agacacagaa agtcttcggg
       61 gatcaaggcg cggaagtgga cataatgacc cccgtcgagt tcggtccgta cattattgcc
      121 gaaacggcta aatggggaaa ggtcatcaaa gaagccaaca tcaaagcaga gtaaaagttt
      181 tgatcttggg aaaaggactc gcgcaaaatg aaaatcgagt tgcgcaacag caaagatttc
      241 tgggctggcc ttatgttgat cgcgatcggc gcgacgtcga tcttcatcgc ccgtggttac
      301 ccatttggca gcacgatgcg gatggggccc ggctacttcc cgagcttgct cggcgggata
      361 ctcgccctgt tcggcattta cgtgctgatc attggactgc gcaggggcga gaagatcacg
      421 gttcactgct cgactcgggc gttgatcgtg ctgcccatct cactggtcgc gttcggggtt
      481 ttgatgacgc atgcgggctt cataccagcg atggcggtgc tcatcttcgg gtcggcatcc
      541 gcgggacggg attttaagtt tgtcgaagtc ctgctgctga ccgttatact ggccgggctc
      601 tcggtcgcca tatttatctg gggcctaggc ttgccgtacc cattgatcaa agggttctga
      661 cactatcgcc atggaacttt tcaaccatct gatctttggg ttcagcgtgg cgctctcggt
      721 acagaacctg ctctactgct tcatcggcgt actggtgggc accttgatcg gcgtgctgcc
      781 cggaatcggg ccgttagcga ccatcgcgat gctgctgcca ctcactttca acgtgccgcc
      841 ggttgcagcc atgatcatgc tcgccggtat ttactacggc gccatgtacg gcggctcgac
      901 gacttcgatt ctggtcaacc tcccgggcga gacggccgcc gtggtcacgt gtatcgacgg
      961 ctaccagatg gcgcggcagg ggcgcgctgg agcggcgctt gcgatcgcgg ccatcggctc
     1021 ttttttcgcc ggtaccgtct gtacgttgtt gatcgcatta ttcgccccgc cgctcggcga
     1081 gtttgcgctg aaattcagtt ccgcggagta tttctcattg atgctgatgg gtctggttgc
     1141 agcggcggtg ctctcccacg gcaacatggt taagtctctc gccatggttg tagtggggct
     1201 gttgttcggc atcgtcggcg ctgacgtcaa ttcagggatc aaacgcttcg ccttcggctt
     1261 ctacgagttg gcagacggca tcggtgtcgt aacgatcgcc gtgggagtgt tcgcggtggg
     1321 tgaaatcttg agcaacttga gcgaccccga ggaacgccag gtcttcacct ccaaggtgac
     1381 gaacctgttt ccgacaaaag acgatctgaa gcgctctttc ggcgcgatcg tcagaggcac
     1441 gggagttggc gcgttcttcg gcgtactgcc aggcacgaca ccggccatcg cctcgttctc
     1501 gtcctacatg gtggagaaga aactagccag ggatccctca cgtttcggcc acggcgccat
     1561 cgagggcgtg gcaggacctg agtccgccaa caacgcggac gcgcagtgca aatttatccc
     1621 gatgctcacc ttgggaattc ccgcaagcgg aacgatggcg ctcatgctcg gcgcgctaat
     1681 gatttacggt attgcgcccg ggccgca
//
LOCUS       DATDHO010000188         2733 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_56986, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000188 DATDHO010000000
VERSION     DATDHO010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2733
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_56986"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..912
                     /locus_tag="VIY07_03580"
                     /pseudo
     CDS             1..912
                     /locus_tag="VIY07_03580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498231.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="CpaF family protein"
     gene            925..1893
                     /locus_tag="VIY07_03585"
     CDS             925..1893
                     /locus_tag="VIY07_03585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEY6380867.1"
                     /translation="MQAIAVFFLVSVAIGGVVYVFIYPYLSGERKAEQRMQSVAKTEP
                     LSRTARGPQKSRRDIVESSLKDLEERRKKSKSVPISVRITRAGLNWSKRQFAMISAAI
                     GLGMFALGFLSGTGLLAAAGLGFAGAFGVPRWLLSFLKKRREAKFLAGLPDAVDIIVR
                     GVKAGLPLLDCIKMITVESSEPIKTEFRLILETQAIGMPLGEACGKLYERTPLPEANF
                     FGIVVAIQQKAGGNLSEALGNLSKVLRDRKKMRAKIQAMSQEAKASAAIIGALPIAVM
                     ILVYLTAPNYITLLFTNSMGHVMLAGSAVWMTMGVLVMKKMINFDF"
     gene            1904..>2733
                     /locus_tag="VIY07_03590"
     CDS             1904..>2733
                     /locus_tag="VIY07_03590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEY6380868.1"
                     /translation="MMDFLIDALNVKTLTMLFAAVAATATVLTLAMPLVMVNPLDKRM
                     RAVALEREKIRQRERERLAQENQKVKLRQTPKQYVQTVVDRFNLSKWVGQEEARLKLV
                     QAGYRGQAPYITYLFVRMVTPVACFLFALIYLFVILKFDQPGTIKLGICFFAAYIAMQ
                     LPLLLLKNKIKRRQLSIKRAFPDTLDLLLICVESGMSIEAAFRKVSDEVGTQSVALAE
                     ELMLTTAELSYLPDRRQAYENLAKRTDLDGVKSVCMALQQSERYGTPLATMLRVMAQE
                     "
BASE COUNT          576 a          800 c          803 g          554 t
ORIGIN      
        1 tcgatgaatc ctcaccgatt tgcgacgcgc gtctaccgga tggttcacgc gtgaacgcaa
       61 tcgtgccgcc actttcgatc gacggcccgg cgctcactat ccgcaagttc aaaaaagaca
      121 agctgaccct cgaccaactc gtcaggtttg gcaccatcac ccctcaaggt gcggagatcc
      181 ttcgcatcat cggccgcagc cgcgtcaaca ccctggtttc tggcggtacc ggctcaggca
      241 aaaccacgct gctcaactgc ctgaccaggt ttatcgacca cgatgagcgc atcatcacct
      301 gcgaagacgc cgcggagttg cagctgcagc agcccctacg tcgtgcgact cgaaacgcga
      361 ccaccgaatc tcgagggtga aggccaggtc acgatgcggg atctcgtccg taactgtctg
      421 cgtatgcggc cagaacggat catcgtcggc gaagttcgcg gaccggaagc cttcgatctg
      481 ctgcaagcca tgaatacggg ccacgacggc tcgatgggca cgttgcacgc caacaatccc
      541 cgcgaagcgc tatcccgact ggagtcgatg atcactatgg gcggcttttc cctaccgtca
      601 cgcaccatcc gtgaaatgat atgcgcttcg gtcgatgtcg taatccaggc cgcacgcttg
      661 cgcgacggtt cgcgcaagat cacccacatc accgaagtga tgggaatgga aggcgacgtc
      721 atcgttacgc aggacatttt cctctacgac atggaaggcg aggacgccaa aggcaacatt
      781 gtcggtcgtc accggtcgac cggtattggc catccgcgct tctgggatcg ggcccgttac
      841 tacggcgagg aaaagcgtct cgccgcggct ctcgatgcgg cggacgcggc aaacgaatcc
      901 atacgggcat aggcggggtg cgctgtgcag gctatcgcgg tctttttcct ggtttcggtc
      961 gccattggcg gagtggtcta cgtatttatc tatccgtatc tgtcgggcga gcgcaaagcc
     1021 gagcagcgca tgcagagcgt tgccaagacc gaaccgctgt cacgcaccgc ccggggaccc
     1081 cagaagtccc ggcgtgacat cgtcgaatcc tcgctcaagg acctcgaaga acgccgcaag
     1141 aaaagcaaga gcgtgcctat ctcggttcgg atcacccgtg ccgggttgaa ctggtcgaaa
     1201 cggcaattcg cgatgatctc ggcggccata gggctcggca tgtttgcctt aggctttttg
     1261 tcgggcacgg gactgctcgc tgcagccggc ctcggcttcg ctggagcttt tggcgttccg
     1321 cgctggttgc tgtcattctt gaagaagcgg cgcgaggcga agtttcttgc gggacttccg
     1381 gatgcagtcg atatcatcgt ccgcggcgtg aaagccggcc tgccgctgct cgattgcata
     1441 aagatgatca cagtcgaatc gtccgagccg ataaagacgg aatttcgact gatcttggaa
     1501 actcaagcca tcggcatgcc gctgggcgaa gcttgcggca aattgtacga gcgcactccg
     1561 ctgccggagg caaatttctt cgggatcgtg gtggctatcc agcagaaagc gggcggcaat
     1621 ctctccgaag cgctcggcaa cctctcgaag gtgttgcgcg accgcaaaaa gatgcgggcg
     1681 aagattcagg caatgtcgca ggaggcaaaa gcgtcggcgg cgatcatcgg cgcgctgcca
     1741 attgcggtga tgatactggt ttacctgacc gccccgaatt acatcacgtt gctgttcacc
     1801 aattcgatgg gccacgtcat gctggccgga tcggcggtgt ggatgacgat gggcgtgctg
     1861 gtcatgaaaa aaatgatcaa tttcgatttc taggtaccag ccgatgatgg acttcctcat
     1921 cgatgcattg aacgtaaaga cgctgacgat gctgttcgcg gccgtcgcgg cgaccgccac
     1981 ggtgcttacg cttgcgatgc cgctggtcat ggtcaatcct ctcgacaagc gcatgcgcgc
     2041 cgtggcgctc gaacgggaaa agattcgcca gcgcgagcgt gagcgccttg cgcaggaaaa
     2101 tcagaaagtc aaactaagac agacgccgaa gcaatacgtc cagaccgtcg tcgaccggtt
     2161 caacctcagt aagtgggtcg gccaggaaga ggcaagactg aagctcgtac aggccggata
     2221 tcgcggccag gcgccttata tcacctatct gttcgtccgg atggtcacgc cggtagcctg
     2281 tttcctgttc gcgctgatct acctgttcgt gattttgaag ttcgatcagc ctgggacgat
     2341 caagctcggc atttgtttct ttgcagccta tatcgccatg cagctgccgc tcctgctgct
     2401 gaagaacaag atcaagcgtc ggcagttgtc gatcaagcgc gcttttcccg acacgctcga
     2461 cttgctgctg atttgcgttg aatcgggcat gtcgatcgaa gccgcgttca gaaaagtcag
     2521 tgacgaagtc gggacgcaat ccgtggcgct ggccgaggaa ctcatgctca ccaccgccga
     2581 gctgtcctac ctcccggacc ggcgccaggc ctacgaaaac cttgcgaaac gtacggatct
     2641 cgatggcgtc aaatccgtct gcatggcctt gcagcagtcc gaacggtacg gaacgccgct
     2701 tgcaaccatg ctgcgtgtga tggctcagga aaa
//
LOCUS       DATDHO010000189         3036 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_206706, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000189 DATDHO010000000
VERSION     DATDHO010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_206706"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="VIY07_03595"
     CDS             <1..294
                     /locus_tag="VIY07_03595"
                     /inference="COORDINATES: protein motif:HMM:NF016623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HEY6380869.1"
                     /translation="YVDDCSSPRSAAGQLAGSHNLPFVKTDIVLDTVPTPTEIDRALA
                     RLEMRARDSGVAVGFAAAQPATIARIADWAKKVESRGIFLVPITMVAIKAKSS"
     gene            338..835
                     /locus_tag="VIY07_03600"
     CDS             338..835
                     /locus_tag="VIY07_03600"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012172610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEY6380870.1"
                     /translation="MPSQKSLPYRPCAGMMVLNRAGLVFIGRRTDGPEHVDATHVWQM
                     PQGGIDEDEDPYKAALRELHEETNIRSVRKLGEIAEWLTYDLPSGVAKTAWGGKYRGQ
                     KQKWYALRFTGDEKEIDIAHPGGHKPEFVEWRWVGMRELPDLVVPFKRKTYERVVKEF
                     ERFTR"
     gene            complement(836..1246)
                     /locus_tag="VIY07_03605"
     CDS             complement(836..1246)
                     /locus_tag="VIY07_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEY6380871.1"
                     /translation="MANFHFELVSPQKLLFSGDVEQVDLPGAEGYFGVLANHAPMVTT
                     LRPGILTVHVAGGQQKIVVLGGFAEVSMDGLTVLANSADAVEDIDRGMIAARIDDLES
                     RIAKTDPGSVLDKLITELDHYRDVDRHLTGTAMH"
     gene            complement(1253..1510)
                     /locus_tag="VIY07_03610"
     CDS             complement(1253..1510)
                     /locus_tag="VIY07_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380872.1"
                     /translation="MLGRSNLLAFLLIGLLIGGLAGYMTRPEETAEIRLGPLSVEVRN
                     NERARGGGPLTSNQVQHIAIMTAIGGAIGLGVGFALGRRRS"
     gene            complement(1516..2952)
                     /gene="atpD"
                     /locus_tag="VIY07_03615"
     CDS             complement(1516..2952)
                     /gene="atpD"
                     /locus_tag="VIY07_03615"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEY6380873.1"
                     /translation="MATPNAVGKITQVIGAVVDVQFEDHLPAILNALETKNGRNRLVL
                     EVAQHLGELTVRTVAMDASEGLVRGQEVTDTGQPIAVPVGNETLGRIINVVGEPVDEA
                     GPVKTKEKRAIHQSAPPYVEQSTEAQILITGIKVVDLLAPYAKGGKIGLFGGAGVGKT
                     VLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKDPRKGSVEGSKCAL
                     VYGQMNEPPGARARVGLTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGSEVSALLGRIP
                     SAVGYQPTLATDMGALQERITTTTKGSVTSVQAIYVPADDLTDPAPATSFAHLDATTV
                     LSRDIAAKGIYPAVDPLDSTSRMLSPLVVGEEHYAVARQVQQILQRYKALQDIIAILG
                     MDELSEEDKLTVARARKIERFLSQPFHVAEVFTGSPGKLVDLQETIKGFKGLCDGKYD
                     NLPEAAFYMVGTIEEAVEKGKKLAAEAA"
BASE COUNT          608 a          923 c          893 g          612 t
ORIGIN      
        1 tatgttgacg actgctcatc gccgcgaagt gcggccggtc agcttgccgg cagtcacaat
       61 ttgccgttcg taaagaccga tatcgtcctc gatacggttc ccactcccac tgaaatcgac
      121 agagcgcttg cgcgtctaga aatgagagcg cgggatagcg gggtcgcagt cggctttgcc
      181 gccgcgcaac cagcgacgat tgcgcggatc gccgattggg cgaagaaagt cgaatcgcgc
      241 ggcatattcc ttgtgccgat aacaatggtg gcgatcaagg cgaagtcatc gtaacgtcat
      301 cggccgcgaa aattcgcgct cgagtgacgg agtctccatg ccatcgcaaa aatcgctgcc
      361 gtatcggccc tgtgccggca tgatggtgct caatcgcgct ggactcgtat tcatcggccg
      421 gcgaaccgac ggccccgagc atgtcgacgc gacacatgtg tggcagatgc cccagggcgg
      481 tatcgatgaa gatgaagatc catacaaggc ggcgctgcgt gaactacacg aggaaaccaa
      541 tatccgctcg gtgcgcaagc ttggcgagat cgccgaatgg ctcacctacg atttgcccag
      601 cggggttgcg aagaccgcct ggggcggcaa ataccgcggg caaaaacaga agtggtatgc
      661 gctgcgtttt acaggagacg aaaaggaaat cgacatcgct catcccggcg gccacaaacc
      721 cgaattcgtc gagtggcgct gggtcgggat gcgggaattg cctgacctgg tcgtaccctt
      781 caaacgcaag acgtacgaac gtgtggtcaa ggaatttgag cggttcacgc gctagctaat
      841 gcatcgccgt gccggtcagg tggcgatcga cgtctctgta atgatcaagc tccgtaatca
      901 gcttgtccag caccgagccc gggtcggtct tggcaatgcg gctttccaga tcatcgatgc
      961 gagcagcgat catcccacga tcgatatctt ccaccgcatc ggctgaattg gcgagcacgg
     1021 tgagaccgtc cattgacact tccgcaaaac cgccgagcac gacaatcttt tgctggccgc
     1081 cggccacgtg aaccgtgaga atgccgggac gcaacgtcgt gaccatgggc gcatggttgg
     1141 ccaatacgcc gaaataaccc tcggctccgg gcagatcgac ttgctcgacg tcacccgaaa
     1201 acaagagctt ctgcggtgaa actagctcga aatgaaaatt ggccattgtc gattaactcc
     1261 tccgcctgcc caaggcgaag cctacgccaa ggccaatggc gccaccaatt gccgtcatga
     1321 tcgcgatgtg ctgaacctga ttgctggtaa gcggtccacc cccgcgcgcc ctctcgttgt
     1381 tgcgcacttc gacgctcaga ggacccagcc tgatctcggc cgtttcttcc ggccgggtca
     1441 tgtaaccggc caagccgccg atcaacagcc cgatcagcag aaacgcaagc aggttggatc
     1501 gccccagcat tggttttatg ccgcttcggc agcgagcttc ttgcccttct cgaccgcttc
     1561 ttcgatggtg ccgaccatgt agaaagcggc ttccggcagg ttatcatact tcccgtcgca
     1621 gagccctttg aagcccttga tggtctcctg cagatcgacc agcttgcccg gcgagccggt
     1681 gaaaacctcg gcgacatgga agggttgtga caggaagcgc tcgatttttc gtgcgcgggc
     1741 gactgtcagc ttgtcctctt ccgacaactc atccatgccg agaatggcaa tgatgtcctg
     1801 cagcgccttg tagcgctgaa gaatctgctg gacctgccgg gcgaccgcat agtgctcctc
     1861 accgacaacg agcggcgaaa gcatgcgcga ggtggagtcg agcggatcga ccgccggata
     1921 aattcccttg gcggcgatat cgcgcgacag cacggtcgtc gcgtcgaggt gcgcgaacga
     1981 ggtcgccggt gccgggtcag tgagatcgtc cgccggcacg tagatcgcct gcaccgaggt
     2041 gaccgagcct ttcgtcgtag tggtgatgcg ctcctgcagg gcgcccatgt cggttgcaag
     2101 cgtcggctga taacccaccg ccgaaggtat gcggccgaga agcgccgaca cttccgagcc
     2161 cgcctgggta aaccggaata tgttgtcgac gaagaacagc acgtcctgtc cctggtcgcg
     2221 gaaatactct gcaaccgtca gaccggtcag gccgacgcga gcacgcgccc cgggtggctc
     2281 gttcatctgg ccgtagacca gcgcgcattt cgaaccctcg accgaccctt ttcttggatc
     2341 cttgttcacg ccggactcga tcatttcatg ataaaggtcg ttgccctcgc gcgtgcgttc
     2401 gccgacgccg gcgaacaccg aatatccgcc gtgcgcttta gcaacgttgt tgatcaattc
     2461 catgatcagc acggttttgc cgacgccggc accgccgaac aagccgatct tgccgccctt
     2521 ggcgtaaggc gcgagcagat ccaccacctt gatgccagtg ataaggatct gcgcttcggt
     2581 ggattgctcg acatacggtg gcgcagactg atggatggcc cgtttctcct tggtcttgac
     2641 gggccccgcc tcgtcgacag gctcgcccac aacgttgatg atgcggccga gcgtttcgtt
     2701 gccgacaggc actgcaatcg gctgaccggt gtcggtgact tcctggccgc gtaccagccc
     2761 ttcggacgcg tccatcgcga ccgtgcggac cgtcaactcg ccgagatgct gggcgacttc
     2821 cagcaccaga cggtttctgc cgtttttcgt ctcaagtgcg ttcaggatcg ccggcaggtg
     2881 atcctcgaac tgcacgtcga cgactgcgcc gatgacctgc gtaatttttc cgactgcatt
     2941 gggtgtggcc ataattgtcc tcgttacgga aactagagcg cctcggcgcc cgagatgatt
     3001 tcgatcagtt ccttcgtgat catcgcctgg cgggtg
//
LOCUS       DATDHO010000190         1749 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_8553, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000190 DATDHO010000000
VERSION     DATDHO010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8553"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..501)
                     /locus_tag="VIY07_03620"
     CDS             complement(<1..501)
                     /locus_tag="VIY07_03620"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6380874.1"
                     /translation="MDRRSFVVGTTALVAAGPVFAQDAFPSRAITIINAFPPGGANDL
                     VTRPIASALEPIVKQPVVVETKAGAGGQVGAQVAASAKPDGYTLLSHNNGISGYEEVD
                     KLFGRQPKTTRADFIPLARLVADPVLVLVNDQQPYKTLKDFVDDAKKRPEAIIYSSGG
                     LYGATHL"
     gene            complement(540..1520)
                     /locus_tag="VIY07_03625"
     CDS             complement(540..1520)
                     /locus_tag="VIY07_03625"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6380875.1"
                     /translation="MDRRQFVAGSTAAATALTMRSAFAQDAYPSHAITFINPFPPGGA
                     ADVVARPLTAVLEPILKQPCVIETKAGAAGQVGGQVAATAKPDGYTLLIHIVSISGFA
                     EVDKLFDRQPKFTRADFIPIARLTSGPMVLLVNDQVPYKTVKELVDDAKKNPDKLIYS
                     SSGLYGALHLPTALFMKAAGIQMKHLPTNGGGPALTAIVGNNSQVLVSSIAAASGQIK
                     AGKLRALACFSPKRAASLPDVPTLKELGYDVEFSLWVGVFAPKNTPAQPVKVLGDAIR
                     QAVNTDQFKTAINNIGDEVAYLDQAGFAKFWDEDAKRVEAAVHAIGRVQG"
     gene            complement(1606..>1749)
                     /locus_tag="VIY07_03630"
     CDS             complement(1606..>1749)
                     /locus_tag="VIY07_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007612648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY6380876.1"
                     /translation="REIGYCHIEKLHNLEMLPSQGFTVSCFPVKVRGGSAGWTRAVAI
                     IDA"
BASE COUNT          336 a          522 c          534 g          357 t
ORIGIN      
        1 gagatgggtt gcgccataga gtccgcccga actgtagatg atcgcctcgg gccgcttttt
       61 ggcgtcgtcc acgaaatcct tcagggtctt gtagggctgc tggtcgttga ccagcacgag
      121 aaccggatcg gcaacaagcc tcgctaaggg aatgaaatcg gcacgcgttg ttttcggttg
      181 tcgcccgaac agcttgtcga cttcctcgta gccggaaatc ccgttgttat gcgaaagcag
      241 cgtgtagcca tccggcttgg cgctggcggc gacctgcgcg ccgacctggc cgccggcgcc
      301 ggccttggtc tcgaccacga ctggctgttt gacgatcggt tccagcgccg aagcgattgg
      361 ccgcgtcaca aggtcgttgg cgccgcccgg cggaaacgca ttgatgattg tgatcgcgcg
      421 agagggaaag gcgtcctgcg cgaacaccgg accggccgcg acgagcgcag tcgtgccgac
      481 gacgaaacta cggcgatcca tcgagtccct ccggaatctt acaaacagtt gcctcctgat
      541 caaccttgaa cgcgaccgat agcatgcact gccgcctcga cccgcttggc atcttcgtcc
      601 cagaatttcg cgaaccctgc ctggtcgaga taagcgacct cgtcgccgat attgttgatg
      661 gcagtcttga actggtcagt gttcactgcc tgcctgatgg cgtcgccgag aaccttcacc
      721 ggctgcgccg gcgtattctt cggcgcaaat acgccgaccc aaagcgaaaa ctcgacgtca
      781 tagccgagtt ccttcagcgt cggaacgtcc ggaagcgaag ctgcccgctt cgggctgaaa
      841 caggccagcg cgcgcaactt tccggccttg atctggccgc tcgccgctgc gatcgacgaa
      901 accagcacct gcgagttgtt gccgacgatc gcggtgaggg cagggccgcc gccattggtc
      961 ggcagatgct tcatctggat gccggctgcc ttcatgaaca gcgcggtcgg cagatggagc
     1021 gccccgtaga ggcccgatga gctgtaaatc agcttgtcgg gattcttttt ggcatcatcg
     1081 accagttcct tgacggtctt gtaaggtacc tggtcgttga caagcaaaac catcggtccg
     1141 gacgtcaacc gcgcgatcgg aatgaaatca gcacgagtga acttcggttg acgatcgaac
     1201 agcttgtcga cctcagcaaa gccggagatc gacacaatgt ggatgagcag cgtgtatccg
     1261 tctggcttcg ccgttgcagc aacttgcccg ccaacctgtc cggctgcgcc cgctttggtc
     1321 tcgatcacac agggctgctt gaggataggc tccaggacag cggtgagcgg acgcgcgacg
     1381 acgtcggcgg cgccacccgg cgggaatgga ttgatgaaag taatggcgtg tgacggatag
     1441 gcgtcctgcg cgaacgcgga acgcatggtg agggccgttg cagcggcagt gctaccggcg
     1501 acaaattggc gtctgtccac gtgaatcctc cctggagtcc ttgttttacc ggattttggc
     1561 ccggcctttt gtgggcggga tgctactgcc cgccgaggtg ggcaatcaag catcaatgat
     1621 cgccaccgcc ctagtccatc ccgctgatcc gccgcgcact ttcaccggaa agcagcttac
     1681 cgtgaagcct tgggatggca gcatttcgag attgtgcagc ttttcgatat ggcaatagcc
     1741 gatttcgcg
//
LOCUS       DATDHO010000191         1658 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_355038, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000191 DATDHO010000000
VERSION     DATDHO010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_355038"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..552)
                     /gene="moaB"
                     /locus_tag="VIY07_03635"
     CDS             complement(<1..552)
                     /gene="moaB"
                     /locus_tag="VIY07_03635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HEY6380877.1"
                     /translation="MPGIDESRPFVPLKIAVLTVSDTRKESDDKSGATLMERIRVAGH
                     VVAERAIVRDEVTAIRQMVKAWIGDKSIDVVITTGGTGFTGRDVTPEAVEPLFEKRMD
                     GFAAMFLLVSERKIGTSAIQTRATAGVANATYVFCLPGSPGACKDAWDEILVHQLDYR
                     YRPCNFVEILPRLDEHLRRSKAKG"
     gene            complement(557..1477)
                     /locus_tag="VIY07_03640"
     CDS             complement(557..1477)
                     /locus_tag="VIY07_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HEY6380878.1"
                     /translation="MRWDDFRRSDNVEDSRGDEGGFPGGGGMGIPIGGGGIGIGTLII
                     LGLLGWALGIDPSVLIGGAEIVNSTRHQEEPYQPQSRRTSETKPGDQMGDFVAAVLGN
                     TEDTWKEVFEKSGQRYSVPRLRLYSGVVHGGCGFAQAAMGPFYCPNDRRIYLDTSFFR
                     DIQQRFRGCTGKACEFAEAYVIAHEVGHHVQNLLGILPQAQRAQQQAGSKAEANRIQV
                     RVELQADCLAGVWANNSNQRWKSIEPGDVEAAMQTAAAIGDDRMQQQSRGYVVPDSFT
                     HGSSAQRQRWFMTGLREGKVSACNTFTGQV"
BASE COUNT          327 a          523 c          453 g          355 t
ORIGIN      
        1 gccttttgcc ttcgaccgac gcaagtgctc gtcaaggcga ggaaggatct ccacgaaatt
       61 gcagggccga taacgataat cgagctgatg cacgaggatt tcgtcccagg catccttgca
      121 tgcacccggc gagcccggca ggcagaagac atacgtcgcg ttggcgacgc ccgcggtggc
      181 acgcgtctgt attgcagacg tgccgatttt cctctcgctc accaggagga acatggcggc
      241 aaaaccatcc atgcgctttt cgaacagagg ctcgaccgct tccggcgtca catcccttcc
      301 cgtgaacccg gtacctcccg tggtgataac gacgtcgatc gatttgtcgc cgatccaggc
      361 tttgaccatc tgacggattg cggtgacttc gtccctgacg atcgcgcgct cggcgacaac
      421 gtggccggct acgcgaatgc gctccatcag ggtcgctccg gatttgtcgt cggattcctt
      481 acgcgtgtcg gataccgtca acaccgcaat cttcagcggc acgaacggtc ggctttcgtc
      541 gatgccgggc atccggttaa acttggcccg tgaatgtgtt gcaggccgat accttgccct
      601 ctctcagccc ggtcatgaac cagcgctgcc gctgcgccga cgagccatgg gtgaacgagt
      661 cgggcacgac gtaaccgcgt gactgctgct gcatgcggtc gtcgccaatg gctgccgccg
      721 tttgcatcgc ggcttcaacg tcgcctggct cgatggattt ccatcgttga ttggaattgt
      781 tcgcccagac gccggcgaga cagtcggcct gcaattcgac ccgcacttga atacgatttg
      841 cttccgcctt gctgcctgcc tgttgttgtg cccgctgcgc ctgcggcaaa atgccgagca
      901 ggttctgcac gtgatgaccg acctcgtggg cgatcacata agcttcggcg aattcgcagg
      961 ccttgccggt gcagccacgg aagcgctgct gaatgtcacg gaagaaagag gtatcgagat
     1021 aaatgcgtcg atcgttcggg cagtagaacg gtcccatcgc cgcttgcgcg aagccgcaac
     1081 caccatggac cacacccgag taaagacgaa gacgcggcac gctgtatcgc tgcccgctct
     1141 tctcgaaaac ttccttccag gtgtcctccg tgttcccgag tacggcggcg acaaaatcgc
     1201 ccatctgatc acccggcttc gtctctgatg tccgccgcga ctgaggctga taaggctcct
     1261 cctggtgtct ggtgctgttc acgatttcgg cgccgccgat caggacactg ggatcaattc
     1321 ccagcgccca cccgagcagg ccgagaatga tgagagttcc aatgccgatt ccaccgccgc
     1381 cgatcggaat acccataccg ccgccgccgg ggaagcctcc ctcgtcaccg cgactgtctt
     1441 cgacattgtc gctgcggcga aaatcatccc aacgcattac gaaatcctcc cgaaattctt
     1501 cacgtgttca tcgacaaata gttgcgatca acacgggttc aaatttcgct ccttatcata
     1561 ctgcctacag cgacattgaa taggcagaat ttgcccagtc acaagtggcg atcataaacc
     1621 ggttttttac tttgcgcgct caagatgccg ctctgtcg
//
LOCUS       DATDHO010000192         3767 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_405197, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000192 DATDHO010000000
VERSION     DATDHO010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3767
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_405197"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            18..536
                     /locus_tag="VIY07_03645"
     CDS             18..536
                     /locus_tag="VIY07_03645"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEY6380879.1"
                     /translation="MRQFAIFAAALVVAGGYAARYADRATESPAVTQAAVLQPSYEPR
                     EPSTSGRSLMVESDRQGHFQLEARVDGRFIDFVVDTGASLVVLRESSAALAGIRPQPR
                     DYTATAVTANGKIKAAPAKIDRIEIGGITVFDVPAMVLPDEALSKNLLGVSFLSRLRR
                     YEYANGRLLLEQ"
     gene            694..2193
                     /locus_tag="VIY07_03650"
     CDS             694..2193
                     /locus_tag="VIY07_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEY6380880.1"
                     /translation="MFPTPKPALTPNTYAYESAPLVKPTGFREYDARWLLEKEVNLMG
                     MQALGLGLGTLIRELNVKPEIVTGHDFRSYSSAVKMALVSGLMASGCKVYDIGLAITP
                     MAYFAQFDLNVQCVAMVTASHNDNGWTGVKMGANRPLTFGPVEMKRLKQIVLSGKFDL
                     EGGGSYEFVENFPERYIADVTKRPKIKRKLKVVAACGNGTAGAFAPRILQAIGCDVVP
                     LDCNLDHTFPRYNPNTEDMKMLHAMRDAVLVNRADVALGFDGDGDRCGVVDNEGEEIF
                     ADKVGVMLARDMSTLHRNTTFVVDVKSTGLFLTDPVLKENGVKVDYWKTGHSYIKRRV
                     NELGAIAGFEKSGHFFFNKPFGRGYDDGMIFALAVCDMLDRNPGKSMADLRKALPKTW
                     GSPTMSPHCDDEKKYAVVDAVVKHFETAKAKAEKVAGQPIRELVTVNGVRVTVEDGTW
                     GLVRASSNKPELVVVVESPVSEQRMREMFRAVDSVLRTHPEVGAYNQTI"
     gene            complement(2206..3096)
                     /locus_tag="VIY07_03655"
     CDS             complement(2206..3096)
                     /locus_tag="VIY07_03655"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY6380881.1"
                     /translation="MDLADLRIFRSVVDEGGITRAAEKLNRVQSNVTTRVRQLEEDLG
                     VNLFIREGKRLHLSPTGKLLLEYADRLLDLAQEARDAIHDGAPRGPLHLGSIESTAAI
                     RLPEPLSVFHRRYPDVELELRSDTIPRLLAAVLAGELDAALVADPVNDPSLDKSTVYD
                     EELVLVAEAGHKPIRSPRDVMSETLLAFEHGCAYRLRMQQWFARAGVLPERIIEMTSW
                     HALIGCTAARMGISILPRMVLATFPQAKLSIHPLPTEFSHAPTVLTWRKGARSPKISA
                     LLEVLIEGRSGNRQARRRKS"
     gene            3193..3510
                     /locus_tag="VIY07_03660"
     CDS             3193..3510
                     /locus_tag="VIY07_03660"
                     /inference="COORDINATES: protein motif:HMM:NF018294.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HEY6380882.1"
                     /translation="MRHETIDFSMLDYRRLPPEQRAEVRRLALARAHAARRQALQEML
                     AGMAVFLRKLVGTTVLWHKDLRARLARHRAATELHSLNDRELKDIGVCRCEINALVFA
                     GRA"
     gene            3569..>3767
                     /locus_tag="VIY07_03665"
     CDS             3569..>3767
                     /locus_tag="VIY07_03665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HEY6380883.1"
                     /translation="MRIAILGAGPAGLYLAYLIKRRRPDWDVTVVEQNRADATFGFGV
                     VLSDSALEFLREDDEATYSAIA"
BASE COUNT          751 a         1088 c         1179 g          749 t
ORIGIN      
        1 catcattggg cctcgccatg cgccaattcg ccatctttgc ggccgctttg gttgtggccg
       61 gcggctacgc ggcacgatat gccgatcgtg ccaccgagag tcccgctgtc acccaggcgg
      121 cggtgttgca gccgtcctac gaaccgcggg agccaagcac ctccggccgc agcctgatgg
      181 tggaaagcga tcgtcagggt catttccagc tcgaggccag ggtcgacgga cgcttcatcg
      241 acttcgttgt cgacaccggc gcctcactgg tcgttctgcg tgaatcgtca gcggccctgg
      301 cgggcattcg gccgcaaccg cgcgactaca ccgcgactgc cgtgaccgcc aacggcaaga
      361 tcaaggccgc cccggccaaa attgaccgca tcgagattgg cggtatcact gtctttgacg
      421 tgccggccat ggtgctgccc gacgaggcgc tgagcaaaaa cctgctgggc gtctcgttcc
      481 tctcgcgcct gagacgctac gaatacgcca acggccgatt gttgctcgag caataattgc
      541 cggtcgtttc ggtttaatcg gggcaggctg ccgactactc gccattgtgg aatgtgggcc
      601 tccggatcgc ggccaaacac cgctgcaact ggaccgcttt ccggcgttcc ggcgttaggg
      661 tatttgaatt gcgccgccct tgttgaggat ctgatgtttc ccaccccgaa acccgcgctc
      721 actccaaata cctatgcata tgaatccgcg ccgctcgtta agccgaccgg gtttcgcgaa
      781 tacgatgcgc gctggctgct tgaaaaagaa gtcaacctga tggggatgca ggccctcgga
      841 ttgggccttg gcacgctcat ccgcgagctc aacgtaaaac cggagatcgt taccggccac
      901 gacttcagga gctattcgtc agccgtgaag atggcgcttg tctcgggatt gatggcgtcc
      961 ggctgcaaag tctatgacat tggccttgcc atcacaccca tggcttattt cgcccagttt
     1021 gatctcaacg tgcagtgtgt cgccatggtg acggcgtcgc acaacgataa tggctggact
     1081 ggcgtgaaaa tgggcgccaa caggcctctg acattcggtc cggtggaaat gaagcgcctc
     1141 aagcaaatcg tgctgagcgg caaattcgat ctcgaaggtg gcggcagcta cgagttcgtg
     1201 gagaattttc ccgagcgcta catcgccgat gtcaccaagc gaccaaagat caagcgcaag
     1261 ctcaaggttg ttgccgcctg cgggaatgga accgccggcg ctttcgcacc gagaatattg
     1321 caagcgatcg gatgcgatgt cgtgccgttg gactgcaatc tcgatcacac gttcccgcgg
     1381 tacaatccga acaccgaaga catgaagatg ctgcacgcca tgcgcgatgc agtgctggtg
     1441 aaccgggcgg acgtcgcgct gggattcgat ggcgatggcg accgttgtgg cgttgtggac
     1501 aacgaaggcg aggaaatttt tgctgacaag gtcggcgtga tgctggcccg cgatatgtcg
     1561 acgctgcatc gaaacacgac ttttgtggtg gacgtgaagt cgaccggact attcctcacc
     1621 gatccggtgc tcaaggaaaa tggcgtcaag gtcgattact ggaaaaccgg tcattcgtac
     1681 atcaagcgtc gcgtgaatga gcttggcgcg atagcgggtt tcgagaaatc cgggcacttc
     1741 ttcttcaaca agccattcgg ccgaggctat gacgacggca tgatcttcgc actcgccgtt
     1801 tgcgacatgc ttgaccgcaa cccgggaaag agcatggccg atctacgcaa ggcgttgccg
     1861 aagacctggg gctcgcccac gatgtcgccc cattgcgacg acgagaagaa gtacgcggtg
     1921 gtcgatgcgg tggtaaagca cttcgagacg gccaaggcga aggccgagaa ggttgctggc
     1981 cagccgatcc gcgagctggt taccgtgaac ggggtgcggg tgaccgttga ggacggaacc
     2041 tggggcctgg tgcgggcttc ctcaaacaag ccggaactgg tcgtagtcgt ggaaagcccg
     2101 gtgtccgagc aacgcatgcg agagatgttt cgggcggtcg atagcgtgct gcgcacgcat
     2161 ccagaagtcg gtgcttacaa ccagacgatc tgacgcgcca cggcgtcagg actttctccg
     2221 tcgcgcctgc cgattgcccg acctgccttc gatcagcact tccagcaacg ccgaaatttt
     2281 tggcgaacgg gcgccctttc gccaggtcag cacggttggt gcatgactga attccgtggg
     2341 caggggatgg atgctgagct tggcctgcgg aaacgtcgcc agcaccatgc gtggcagaat
     2401 cgaaatgccc atgcgagcgg cggtgcatcc gatcagtgca tgccaggacg tcatttcgat
     2461 gatgcgttcg ggaaggacgc ccgcgcgcgc aaaccattgc tgcatgcgca ggcgataggc
     2521 acagccatgt tcgaaggcaa gcaacgtctc cgacatgaca tcgcgcggtg aacggatcgg
     2581 cttgtggccg gcttcggcca caagcaccag ctcttcatca tagaccgtcg acttgtccaa
     2641 tgatggatcg ttgaccgggt cggcaacgag ggcggcatcg agttcgccgg cgagcaccgc
     2701 ggccagcagg cgcggaatgg tgtcggaacg aagttcgagc tcaacgtcgg gatagcggcg
     2761 atgaaagacg ctgagcggct ccggcaggcg gatcgcggct gtgctctcga tggagccaag
     2821 atgcaatggc ccgcggggcg cgccgtcatg gattgcatcg cgcgcttcct gcgcgaggtc
     2881 gagcagccgg tcggcatatt cgagcagcag cttgcctgtg ggcgacaggt gtaggcgctt
     2941 cccctcgcga atgaacaggt tgacgccgag atcctcctcg agttgccgca cccgcgttgt
     3001 cacgtttgac tgcacgcggt tgagcttctc ggcagcgcgc gtaatcccgc cttcgtcgac
     3061 gaccgagcga aagatgcgca aatcggccag gtccatcgtt ctctccatga gaaccaaatg
     3121 attataatta ttcattttat gagatttatg cacgggcgta aagacctagc cgacagcaat
     3181 ggagacattg tcatgcggca cgaaacgatc gatttttcaa tgctggacta caggcggctt
     3241 ccgcccgaac agcgcgctga ggtgaggcgt ttggcgctgg cgcgggctca tgccgcgcgc
     3301 aggcaagcgt tgcaagagat gctcgcggga atggcagttt tcttgcgaaa gctcgtgggc
     3361 accaccgtgc tttggcacaa ggacctgcgc gcgcgtctcg cccgacaccg ggcggcgacc
     3421 gagttgcatt cactcaatga ccgggaactg aaggatatcg gcgtctgccg gtgcgagatc
     3481 aatgcgctgg tctttgccgg ccgggcgtaa aagcaattgc agttccgtaa cgggtgcggc
     3541 acgcggcgct ctgtagtatt gctgcaccat gcgtatcgcc attctcggcg ccggcccggc
     3601 gggattgtat cttgcatatt tgatcaagcg ccgtcgtccg gactgggacg tcactgtcgt
     3661 cgagcaaaat cgcgccgatg ccacgttcgg ctttggcgtc gtgctctccg acagcgcact
     3721 ggaatttttg cgcgaggacg acgaggccac ctattcggcg atcgcac
//
LOCUS       DATDHO010000193        18575 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_8577, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000193 DATDHO010000000
VERSION     DATDHO010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 18575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18575
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8577"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..574
                     /locus_tag="VIY07_03670"
     CDS             <1..574
                     /locus_tag="VIY07_03670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HEY6380884.1"
                     /translation="ADCIPFGQDTVHASYDAQYVNRFWRVLLSASEVFARFRTAFLGK
                     ASPVHFFWGSFDLAVTRFSGRPAPRHPGGVPHLSDAVAQEAYSHEVSSAGFWPGGGGP
                     IDYAAFYSYAYPAPEGFSAARVLPKEAFFSKELGEFLLPYDAVRTARDPDAALMDFLQ
                     STYAAAADLAKWDRAALECALGEPGKVRPV"
     gene            complement(598..1290)
                     /locus_tag="VIY07_03675"
     CDS             complement(598..1290)
                     /locus_tag="VIY07_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY6380885.1"
                     /translation="MLDQSLIADFPLFAGLDHEALDDILACAHARHYAKGTPVFSQNE
                     EAHSFFLLLHGRLRVTQVTPHGEQIVVRFVSPGDLFGVAMALGRDTYPGTATAIVDSL
                     ALLWPSRAWPDLVSRHPLLANNTMRMIGGRLQEAHQRLREISTEDVERRVAHAVLKLA
                     DEAGQASAGTTLIDFPLSRQDIAELTATTLHTVSRIISAWEAGGVIEGGRQRIAIRDR
                     KRLQSIADGQIS"
     gene            complement(1420..2595)
                     /gene="nirK"
                     /locus_tag="VIY07_03680"
     CDS             complement(1420..2595)
                     /gene="nirK"
                     /locus_tag="VIY07_03680"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012091263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
                     /protein_id="HEY6380886.1"
                     /translation="MKLPKDRNDRVMVGLCVALAGMAVAVVWTSALFDPNFAATRQAL
                     AAEKPQNPRIYTSQPASGPVPLAHKVHKIVKTDDPISIVRDPNDIPAPLGARGPKRVK
                     VDLETVEVTGHLADGATYRYWTFNQKVPGPFIRVRVGDTVEVRLKNHDDSIMMHNVDF
                     HAVTGPGGGAKATDAAPGEARGFEFTAINPGLYVYHCAVPMAAQHIANGMYGIILVEP
                     EGGLPKVDREFYVMQGEIYTEQKLGSKGELTESYDKLLAERPEYFVFNGAALALAKDK
                     PLKAKTGETVRIFFGVGGPNYTSSFHLIGEIFDRVYNLGSLTTSPMRDVQTTTVPPGG
                     ATMVEVKLEVPGKFMLVDHALSRVERGLAGVLEVDGRDNPDIYKDYDPAKSAKSMSH"
     gene            2760..4400
                     /locus_tag="VIY07_03685"
     CDS             2760..4400
                     /locus_tag="VIY07_03685"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEY6380887.1"
                     /translation="MNAPAQVVPPYKHTPLFPLGPDKTPYRKLDFGGVKVEKVMGKDM
                     LVIEREALRALSEAAFIDINHLLRPAHLKQLRKILDDPEASDNDKFVAYDFLKNANIA
                     AGGVLPMCQDTGTAIIMGKKGRMVFTAGDDEAALAEGARDAYLKRNLRYSQLAPISMF
                     EEKNTRSNMPAQVEIYAEGEDAYKLLFIAKGGGSANKAFLFQATPSILTHDRMLAFLK
                     EKVLTLGTAACPPYHLAIVIGGTSAELTMKTVKLASTKYLDELPTKGSEDGHAFRDLE
                     MEAEVLKMTQSTGVGAQFGGKYFCHDVRVIRLPRHGASLPIGLGVSCAADRQALGKIT
                     REGVFLEELEHHPAQYLPEIDQEKLGGQVVKVDLRRPMKEILAQLSKYPVKTRLSLTG
                     PMIVARDLAHSKLRERLEAGKGLPDYFKNHPIYYAGPAKTPAGYASGSFGPTTAGRMD
                     SYIEQFQATGGSMISLAKGNRSAQVREACKKYGGFYLASIGGSAAKLAEHCIKKVDVH
                     EYPELGMEAIWKIEVENFPAFIVIDDKGNDFFKELNLG"
     gene            complement(4447..4617)
                     /locus_tag="VIY07_03690"
     CDS             complement(4447..4617)
                     /locus_tag="VIY07_03690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380888.1"
                     /translation="MRFLRKYTAIPAVKYSLIAVASVLWLIGFAEQLPDVEQTAKYLG
                     ISLLMVVVAATA"
     gene            complement(4840..5055)
                     /locus_tag="VIY07_03695"
     CDS             complement(4840..5055)
                     /locus_tag="VIY07_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEY6380889.1"
                     /translation="MIGKRVQFHDETWQELRLLASESMKTFQELADEAFNDLLKKHGH
                     PANLKEALRRSAGESAKIIPLKRRRKK"
     gene            complement(5151..5390)
                     /locus_tag="VIY07_03700"
     CDS             complement(5151..5390)
                     /locus_tag="VIY07_03700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380890.1"
                     /translation="MATILDLFRATDYDPDTVQILCDAYEKARKSLHDTGQPAIVNEI
                     IAQRIIALAQQGERDPDRLCAGALTALGSKAVFER"
     gene            complement(5543..5722)
                     /locus_tag="VIY07_03705"
     CDS             complement(5543..5722)
                     /locus_tag="VIY07_03705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380891.1"
                     /translation="MNKINEYLLHAAECREMARTASPTHRQQLEQMAETWEQLADARK
                     RQLERQGKKADDDIS"
     gene            complement(5821..6027)
                     /locus_tag="VIY07_03710"
     CDS             complement(5821..6027)
                     /locus_tag="VIY07_03710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380892.1"
                     /translation="MTSGDNYLFRAAEFFAKAESETDLEMRAGFENLARAYLRLAEQA
                     LRNAQTDVIYEPAPPKLDDPELKR"
     gene            6268..7353
                     /gene="recA"
                     /locus_tag="VIY07_03715"
     CDS             6268..7353
                     /gene="recA"
                     /locus_tag="VIY07_03715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEY6380893.1"
                     /translation="MSQPALRLVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDK
                     AMDIEAISSGSLGLDIALGIGGLPRGRVVEIYGPESSGKTTLALHTIAEAQKKGGICA
                     FVDAEHALDVVYARKLGVNVDDLLISQPDAGEQALEIADTLVRSGAIDVLVVDSVAAL
                     VPRSELEGEIGDVQPGSQARLMSQALRKLTASISRSRTMVVFINQIRMKIGVMYGSPE
                     TTSGGNALKFYASVRLDIRRIGAIKERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYG
                     EGVSKTGELIDLGVKAGVVEKSGAWFSYDSQRIGQGRENAKQFLKENPDVAGRIEAAV
                     RQNAGLIAEAIMAGEDGDKDDEEAAEA"
     gene            8033..10681
                     /gene="alaS"
                     /locus_tag="VIY07_03720"
     CDS             8033..10681
                     /gene="alaS"
                     /locus_tag="VIY07_03720"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009336921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEY6380894.1"
                     /translation="MSGVNDIRKGFLDFFAKNEHQVVPSSSLVPRNDPTLMFTNAGMV
                     PFKNVFTGLEKRPYSRAVTAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYF
                     KERAIELAWTLVTKDYALPKDRLLITVYVDDDEAFGLWKKIAGLPDSKILRIAGADNF
                     WAMGDTGPCGPCSEIFYDHGPHIPGGPPGSPDAEGDRFIEIWNLVFMQYEQFEGGKRI
                     DLPRPSIDTGMGLERIAAVLQGTHDNYAIDLFVSLIRVIAELTGVDPEGPQKASHRVI
                     ADHLRASAFLIADGVLPSNEGRGYVLRRIMRRAMRHAELLGAKEPLMWKLVPALTREM
                     GQAYWELLRAEALITETLKLEETRFRRTLERGLAILDEKSAGLKKGAMFDGETAFTLY
                     DTYGFPLDLTQDALRSRGISVDVASFSDAMERQREKARASWAGSGDTAQESVWFALRE
                     RIGATEFLGYETETAEGVIAALVKDGREVSELKKGESGSVMMNQTPFYAESGGQVGDT
                     GEMRREGVRLVVSDTQKKAGDLFAHLVKVEQGAVKVGDPLLMDVDHARRGAIRQNHSA
                     THLLHEALRQVLGDHVAQKGSLVAPDRLRFDFSHPKPMSPDEIERVEDIANDMVLQNR
                     PVTTRLMAVDDAIASGARALFGEKYGDEVRVVAMGEGGGNTMGWSVELCGGTHVRRTG
                     DIGVISLVGEAGVAAGVRRIEALTAKAARKAANKQLQVVKAAAAELKAPLEEMPGRIE
                     ELLDERKKLERELSEAKKKLAMGGGKSEAGDVRHVNGVKLLARAVSGIELKDLRSLAD
                     EGKRQVGSGVVAIVATSEDGKAGIVVGVTDDLTKRFNAVELVKKGAEVLGGKGGGGRP
                     DMAQAGGPDGSKAEDALKAIEAALGA"
     gene            10834..12045
                     /locus_tag="VIY07_03725"
     CDS             10834..12045
                     /locus_tag="VIY07_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009489495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-gated ion channel"
                     /protein_id="HEY6380895.1"
                     /translation="MMSRGRTRNLRRRVYQVLEQGPIGDGVSTWVDRALVAIIVINLV
                     AVALESMPQYATHYAVAFDWIEYVSLAVFTIEYALRLWVAVEHGPYRHLSHMRARLKY
                     ATSTAGIIDLIAVLPFWFAMLLPSDFRFVLVFRMVRFFKIARYSPAMRSLLDVLYNER
                     RALVGCLIIALGTALVAASLMHLAEGKVQPDKLGTIPDAFWWAIVTIGTIGYGDVVPV
                     TALGKTIATVTIFAGLVLMALPVGIVATAFADQIQRRDFIVTWGMISRVPLFAELDAA
                     EISDVMELLRAQVAEPGEIIVREGDPAHSMYFIASGEVEIAFKGKKTPLRLGVGQFFG
                     EVAVLRRSRRSATVTAISRSNLLVLDAQDLRALMHRDPRVAERIHDVVEKRVGREVTS
                     SKGDIVSEEID"
     gene            complement(12080..13291)
                     /locus_tag="VIY07_03730"
                     /pseudo
     CDS             complement(12080..13291)
                     /locus_tag="VIY07_03730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494114.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006102 - isocitrate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
     gene            13448..14653
                     /locus_tag="VIY07_03735"
     CDS             13448..14653
                     /locus_tag="VIY07_03735"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmJ/YjtD family RNA methyltransferase"
                     /protein_id="HEY6380896.1"
                     /translation="MPGAGTDKTKRWIETPAPVVVLVEPQLGENIGAAARAMANFGLA
                     RLRLVKPQQGWPNAKARVMAAGADRILDNAVLYDSLNEAIGDCTFVLATTARNHDQAK
                     PVISAEAAASEMAERVSMGESVAIVFGRERIGLENHEVALADGIVTLPVNPAFASLNL
                     AQAVVIVAYEWFKRAGGGELPFSMPDKSPPAAKRQLDAFFSNLERELERVEFFRPEEK
                     RGTMSVNLRNIFQRMTPTQQDIRTLHGVINAIAQGRKGPARGGVLDPTEAQKLRDLLA
                     EHGGGRVPGERGPVRGLARLLRRNPTEAERALWQALVNDRRFAGRGFKRQVPIGPHIV
                     DFVSFPLRCVIELVPAQESAEAVETRAQRRAYLGERDYRVCEVGADEVERDITKVLNG
                     LSAVVSTER"
     gene            complement(14911..15690)
                     /locus_tag="VIY07_03740"
     CDS             complement(14911..15690)
                     /locus_tag="VIY07_03740"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEY6380897.1"
                     /translation="MTESPFALARRLRAGETVYGAWCMLGSTHVAETIAREGFAAVVL
                     DAQHGLWDTGSLITGVGALNHAGSAPAVRVPLNDFALVSRALDFGAEAIIAPMINTAD
                     DARQFAAAAKYPPLGERSWGPLRAMALQSPRTAPVDHMREANEGTLTFAMIETATALA
                     NVDAIAATSGIDALFVGPYDLATALSGGSAQDVQAAKVEQAIDKICAASKKAGKIPGI
                     YCRDTESALAMARRGYRFIIAGNDQTTLRAATVAQLKALKG"
     gene            complement(15812..16132)
                     /locus_tag="VIY07_03745"
     CDS             complement(15812..16132)
                     /locus_tag="VIY07_03745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HEY6380898.1"
                     /translation="MSTTFDKREEGFEKQFAHDEELKFKAMARRNKMLGLWAAGILGK
                     SGADAEAYAKEVVLADFEEAGDTDVLRKVTKDLEPKGVTEQQIRARMTELLTEAVAQI
                     KKSG"
     gene            16423..17190
                     /gene="purC"
                     /locus_tag="VIY07_03750"
     CDS             16423..17190
                     /gene="purC"
                     /locus_tag="VIY07_03750"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEY6380899.1"
                     /translation="MSRRRRIYEGKAKVLYEGPEPGTLIQHFKDDATAFNAKKHEVIE
                     GKGVLNNRISEYVFQHLNDIGVPTHFIRRLNMREQLIREVEIIPLEIVVRNVAAGSLA
                     QRLGIEEGTQLPRSIIEFYYKNDKLNDPMVSEEHITAFGWASPQEIDDIMALAIRVND
                     FLSGLFLGVGIRLVDFKMETGRLWENDVMRIVVADEISPDSCRLWDIKTNDKLDKDRF
                     RRDLGGLVEAYTEVAKRLGIMGEGERPQGTGPVLVKS"
     gene            17322..17465
                     /locus_tag="VIY07_03755"
     CDS             17322..17465
                     /locus_tag="VIY07_03755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380900.1"
                     /translation="MPAHSRPKDGVLSHAYGAGIHDFCDIQQRRPGCRHKAGHDGKNA
                     AIG"
     gene            complement(17462..>18575)
                     /locus_tag="VIY07_03760"
     CDS             complement(17462..>18575)
                     /locus_tag="VIY07_03760"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEY6380901.1"
                     /translation="RIGAKSTHLTTLRQFSTAYDVNWLSTIRGRAGLALDSTLFYLTG
                     GVAFGHIESAFAALLANGVAFSFSQNQTKAGWTVGAGIEHMFAPNWTARAEWRYVDLG
                     KTGVACTPGTGPCERPSGEFSNALMLGLIGVNYKFGGGHAPYWSAARAHAPLPVTIWA
                     GGYLGIQGGIVHHDTFFNDSDFFFSLFTSLHEREKTGGTVGGLLGYNWQQGNFVNGLE
                     GDWSWIGARTSQLAALNTFESLSTSFDVNWLATLRGRAGLAFDSTLVYVTGGVAFGHA
                     NNRFNLIFTPSSGPSLVASFTENKTKVGWTAGVGVEHMFSQHWTARAEFRYVDLGTAT
                     VACNSATDFNNCVSSGYRGTFSNTLKLGLVGLAYKF"
BASE COUNT         3607 a         5514 c         5799 g         3655 t
ORIGIN      
        1 cgccgactgc atcccgttcg ggcaggatac cgtccatgcg tcctacgatg cccaatacgt
       61 caatcgcttc tggcgcgtgt tgctttcggc gagcgaggta ttcgcgcgct tccgaaccgc
      121 tttccttggc aaagcaagcc ccgtgcattt tttctggggc agttttgatc tcgcggtcac
      181 gcgcttttcc ggccggccgg caccccgcca tccgggcggc gtgccgcatc tgtcagatgc
      241 ggtcgcgcag gaggcctatt cgcacgaggt ctcgagcgcc ggcttctggc cgggcggggg
      301 cgggcccatc gattacgccg cgttctattc ctacgcctat cctgcgccgg aggggttcag
      361 cgctgcgcgc gtgctgccga aggaagcgtt tttcagcaag gagcttggcg agtttctgct
      421 gccctacgat gccgtccgaa ccgcgcgcga tccggacgcg gccctgatgg acttcctgca
      481 gagcacctac gccgcggcag cggacctagc caaatgggat cgcgcggcgc tggagtgcgc
      541 gctaggcgag cccggcaaag taaggccggt ctgaactcgg cacttattta tctgcaatta
      601 tgaaatctgg ccgtcggcga tcgattgcag gcgtttacgg tcacggatcg cgatccgctg
      661 gcggccacct tcaatgacgc cgccggcttc ccaggcgctt atgattctgc tgacggtgtg
      721 caaggtcgtt gcagtcaatt cggcgatatc ctgccggctt agcggaaaat caatgagcgt
      781 cgttcccgca gatgcctgac cggcttcgtc ggcgagcttg agaaccgcat gcgcgacgcg
      841 ccgctcgaca tcctcggttg aaatttcccg caagcgctga tgcgcctcct gtagtcggcc
      901 gccgatcatg cgcatggtat tgttcgccag caggggatga cggctaacca ggtccggcca
      961 ggccctcgat ggccagagca gcgcgaggct gtccactatg gcggtggcag tgccaggata
     1021 ggtgtcgcgc ccaagcgcca tcgccacgcc gaacaaatca cccggactga cgaaccgcac
     1081 tacgatctgt tcgccgtgcg gcgtcacctg ggtgacccgc aagcgcccgt gcaacagcag
     1141 gaaaaaggaa tgtgcttcct cgttctggga aaaaacaggc gtgcctttcg catagtgacg
     1201 cgcgtgcgcg cacgccagaa tgtcatcgag cgcttcgtgg tcgagaccgg cgaacaaagg
     1261 aaaatcagca atcagtgatt ggtcgagcat gagcgttacg ccgcatcccg gagtgttcgg
     1321 cgagaggaca ggcgcacgca tcatagctta cagtactttc gtgaaaaggc gccgccggcc
     1381 caggaaaggc cggcgtttta ggttcagata accggttggt cagtgcgaca tcgacttcgc
     1441 ggacttcgcc ggatcgtagt ccttgtagat gtcggggttg tcgcgaccat cgacttcaag
     1501 cacgccggca aggccacgct cgacacggct gagcgcatga tcgaccagca tgaacttgcc
     1561 cggaacttcc agcttgacct ccaccatcgt agcgcctcct ggcggtaccg tggtcgtctg
     1621 cacgtccctc atcggcgaag tggtcagcga tcccagattg tacacgcggt caaagatttc
     1681 gccgatcagg tgaaaggacg aggtgtagtt cggtcctccg actccgaaga agatgcgaac
     1741 ggtttcaccg gtctttgcct tgagcggctt atccttggcg agggcaagcg cggcgccatt
     1801 gaatacgaaa tactccggtc gctctgccaa cagcttgtcg tagctttcgg tgagctcgcc
     1861 tttgctgcca agcttctgtt cggtgtagat ctcgccctgc atgacgtaga attcgcgatc
     1921 gaccttgggc aacccgcctt cgggttcgac caggatgatt ccatacatgc cgttggcgat
     1981 gtgctgcgcc gccatcggca ccgcgcagtg atagacgtat agccccggat tgattgctgt
     2041 gaattcaaag cctcgtgctt cgccgggtgc cgcgtcagtg gccttggcgc ctccgcccgg
     2101 tccggtgaca gcgtgaaaat cgacgttgtg catcatgatg ctgtcgtcat ggtttttcag
     2161 ccgcacttct accgtgtcgc cgacgcgcac gcggatgaac ggcccgggca ctttctgatt
     2221 gaatgtccag taacgatagg tagcgccgtc ggcgaggtgg cctgtcacct cgacggtttc
     2281 cagatcgacc ttgacgcgct tcgggccccg agcaccgaga ggagctggga tatcgttcgg
     2341 atcgcgcacg atagagatcg ggtcgtccgt cttgacgatc ttatggacct tatgtgcgag
     2401 cgggaccggc ccgcttgccg gttgcgaagt gtagatacgc gggttctgcg gcttctccgc
     2461 agcgagcgcc tgacgcgtcg cggcaaagtt cggatcgaat agcgccgagg tccagacaac
     2521 ggcgacggcc attccagcca gtgccacaca caaaccgacc attacgcggt cgtttctgtc
     2581 tttggggagt ttcatggctg tgcccttcca acaggtgctt ttttcgtacg caccataggc
     2641 aggggaggcc ggcgttcttt gttttgggac aaacaggaag cggattgggc taatgacttt
     2701 ccatcggcgc aaaccggcgg tatgacgctg ccgaaatccg cctatgaccg gagctttcca
     2761 tgaacgcgcc tgcccaggtc gtcccgccct ataaacacac gccgctgttt ccgctcgggc
     2821 cggacaagac gccttatcgc aagctcgatt tcggcggcgt caaggtcgag aaagtaatgg
     2881 gcaaagacat gctggttatc gagcgcgagg cgctgcgcgc gctcagcgag gcagccttca
     2941 tcgatatcaa ccatctgctg cggcctgcac acctcaagca actgcgcaag attctcgacg
     3001 atcccgaggc aagcgataac gacaagttcg tcgcttatga ttttctgaag aacgcgaaca
     3061 ttgcggccgg cggcgtgctg ccgatgtgcc aggataccgg aacggccatc atcatgggca
     3121 agaagggccg catggtgttc accgcgggcg acgacgaggc cgcgctcgcg gagggggcgc
     3181 gcgatgcgta tctcaagcgc aatctgcgct attcgcagct cgcgccgatc tcgatgttcg
     3241 aggaaaagaa caccaggtcg aacatgccgg cgcaggtcga gatctatgcc gaaggcgagg
     3301 acgcctacaa gctgctgttc atcgccaagg gtggcggttc ggccaacaag gcgttcctct
     3361 tccaggcgac gccctcgatc ctgacccatg accgcatgct ggcctttctg aaggagaagg
     3421 tgctcacgct cggcacggcc gcgtgcccgc cgtatcacct tgcgatcgtc atcggcggca
     3481 cttcggccga gctgacgatg aagacggtca agcttgcgtc gaccaagtat ctcgacgaat
     3541 tgccgaccaa gggcagcgag gacggccacg ctttccgcga cctcgagatg gaagcggaag
     3601 ttttgaagat gacgcaatcg accggcgtcg gcgcgcagtt cggcggcaaa tatttctgcc
     3661 acgacgtgcg cgtgatccgc ctgccgcgac acggtgcgtc attgccgatc gggctcggtg
     3721 tttcctgcgc cgcggaccgg caggcgctcg gcaagatcac gcgcgagggc gtgttcctcg
     3781 aggagctcga gcatcatcct gcgcaatatc tgcccgagat cgaccaggaa aagctgggcg
     3841 ggcaggtcgt gaaggtcgac ctgcgcagac cgatgaaaga aatactcgcg cagctttcga
     3901 aatatccggt gaagacgcgc ctctcgctaa caggcccgat gatcgtcgcg cgcgatctcg
     3961 cgcattcgaa attgcgcgaa aggctcgaag cagggaaggg cctgcccgat tatttcaaga
     4021 accatccgat ctactacgcc ggcccggcga agactcccgc gggctacgcg tcaggctcgt
     4081 tcggcccgac cactgccgga cggatggatt cctacatcga gcaattccag gccaccggcg
     4141 gctcgatgat ctcgctcgcc aagggcaatc gctcggcgca ggttcgcgaa gcctgcaaga
     4201 agtacggcgg cttctatctc gcctcgatcg gcggcagcgc ggccaagctc gccgaacact
     4261 gcatcaagaa agtcgacgtg cacgaatacc ccgaacttgg gatggaggcg atctggaaga
     4321 ttgaggtcga gaactttccc gcgtttattg tgatcgacga caagggcaat gacttcttca
     4381 aggaattgaa tctgggctaa cgcgtttcgt caggcgtaag tcacacctca acacgtcggg
     4441 tcgtcgtcac gccgttgccg cgaccacaac catcagtagc gagatgccga gatatttcgc
     4501 cgtctgctcc acgtcaggca gttgctcggc gaagccgatc agccacagca cgctggcaac
     4561 agcaataagt gaatatttca ccgccgggat tgcggtgtac ttccgcaaga acctcataac
     4621 accactccac tagcgcgccc cgtcccggca gtacgcacta ctgcaatgca atgtagccta
     4681 ttgcatcgca aaatagcaaa tccgagtgga aggccgatgc aatcggataa cgccgggcca
     4741 tcgtctggtt tcccgtatga tgaaaaaaac agcatgccga ctaccgcggt gccgcgtgtc
     4801 caagggggtg caggagcgct cagcgaatcc gaaacggcgt cacttttttc ttcgccgctt
     4861 gagcgggatt atcttcgcgc tttcgccggc gcttcttcgc agagcttctt tcaggtttgc
     4921 cggatggccg tgctttttca gcagatcatt gaaggcctca tccgcaagct cctggaatgt
     4981 cttcatgctt tctgacgcca gtaggcggag ctcctgccag gtctcatcgt gaaactgtac
     5041 ccgtttgccg atcatgatgt tcaacccgat tgatcattcc tgtctgagcc aatgaggcct
     5101 cagacgacgg ttatttgcgc ggccgtttcg catgttttca ggtcgccgac ctatctttca
     5161 aataccgcct tgctgcccaa ggcggtgagt gcgcccgcgc acaaccgatc gggatcgcgc
     5221 tcgccctgct gtgccagtgc gataatgcgc tgggcgataa tctcgttcac gattgccggc
     5281 tggccggtat cgtgcagcga tttgcgcgcc ttttcatagg catcgcacaa tatctggacg
     5341 gtgtccggat cgtagtcggt cgctcgaaag aggtccagaa tagtggccat cgcaactgcc
     5401 tcggctcgcg attctgcgcc tgtttggcga gattagccag ccacggtcgg ttgcgatact
     5461 tttgcgcaca atgcgtgaag cctctgcgaa ggatgtgtga agcctcgcgg atcacgcatt
     5521 tggtttccgg acagaccgcg acttaggaaa tgtcgtcgtc ggcctttttc ccctgccgtt
     5581 ccagttgccg cttgcgagcg tcagcaagtt gctcccaggt ttcagccatt tgctcgagct
     5641 gctggcgatg agtgggcgag gcggttcgcg ccatctctct gcattcggcg gcatgtagaa
     5701 ggtactcgtt gatcttgttc aaagctgaaa cccactgaac tgttacccaa cggtacagag
     5761 gaagatttct tgcgccctgc cgaagcgttg ggtgacggtg ccgccggtgg cagcgagggc
     5821 ctaccgcttc aactccggat cgtccagctt gggcggcgcc ggttcataga tgacatcggt
     5881 ctgcgcgttg cgcagggcct gctcggccag gcgcagatag gcacgtgcca gattttcgaa
     5941 gcctgcgcgc atttccagat cggtttcgga ttcagccttg gcgaaaaact ctgccgccct
     6001 gaacagatag ttgtcccccg aggtcattgg tccctctgtg tcttttttac gcaatgtttc
     6061 tgtgcaatgc agcgcgggtg aattcgttcc ccgaaatagc agagacaagc ctttgttttt
     6121 tcatgccggg ccgcaaaacg atcaaccaaa agaacatatt gcgaacagag aacaaatagt
     6181 gtacattgct gacttcagtc gattccgacg gtgcagcggg gctgcgttgt cggggggtcg
     6241 aatcccggcc ataaggagcg cgacatcatg agtcagcctg ccctgcgtct cgttgaagga
     6301 tcgtccatgg ataaatcgaa agccctctct gctgcgctga gccagatcga gcgtcagttc
     6361 ggcaagggct cggtcatgaa gcttggcaaa aatgacaaag ccatggatat cgaagctatc
     6421 tcctcgggct cgcttgggct cgatatcgcg cttggcattg gcgggcttcc gcgcggccgc
     6481 gtagtcgaaa tctatgggcc ggaatcctcg ggcaagacca cactcgcatt gcacacgatt
     6541 gcagaggccc agaagaaggg cggcatctgc gccttcgtcg acgccgaaca cgcgctggac
     6601 gtggtttatg cccgcaagct tggcgtgaat gtcgatgacc tgttgatttc ccagcccgac
     6661 gccggcgagc aggcgctcga aatcgccgac acgctggtgc gctctggcgc gatcgacgtg
     6721 ctggtggtcg attccgttgc ggcactcgtg ccgcggtccg agctcgaagg cgagatcggg
     6781 gacgtgcaac cgggctcgca ggctcgcctg atgagccagg cgctgcgcaa gctcaccgcc
     6841 tcgatctcac gctcgcggac gatggtggtt ttcatcaatc agatccgcat gaaaatcggc
     6901 gtgatgtacg gctctccgga gacgacatcg ggcggcaacg cgctgaaatt ctatgcctcg
     6961 gtgcggctcg atatccgacg cattggcgcg atcaaggagc gcgacgaagt tgtcggtaat
     7021 cagacgcgcg tgaaggtggt caagaacaag ctggcgcccc cgttcaagca ggtcgaattc
     7081 gacatcatgt acggggaagg cgtgtccaag acgggcgagc tgatcgatct cggcgttaag
     7141 gccggggtgg ttgagaaatc cggcgcgtgg ttctcctatg acagccagcg catcggtcag
     7201 ggccgggaga acgccaagca gtttctcaag gaaaatcccg acgtcgccgg caggatcgaa
     7261 gctgccgtgc gccagaatgc cggcctgatt gcggaagcga tcatggcggg cgaggacggg
     7321 gacaaggacg acgaggaagc cgcggaggct tgaaaggatg ctgggctgcc gggcggcgtt
     7381 gtcgcaacgc tgccgcccgg agctggtctt cgtgaggcag gcaaagcctt ccagagcgaa
     7441 gctccggcgc aggagcgatc agaaccgctg cctgccttgc ccacgccgac ccaactcgtc
     7501 gaaaccaagg gtattgccga gtccatcgca ggaccaaagg ccgctgaccc aaggaaggcc
     7561 gaacctgcgg agcgcagagc aaagaccgcg aacgcaagga gcaaacaacc aggggccggg
     7621 tctgccaagg tcaagggccc caaggttaaa ggctccaagc gcaaacggaa gacaggccac
     7681 tagggccgag ggttagtaag gcgaggcggc ggcgcctgcg ttctccgctg caccatttgg
     7741 cgacgcgtat cattcagtgg tgcgctagca ttcgcccccg tcggcacccg gctgcgtaaa
     7801 gcggccgcca ccgaggacgg gggcgaaggc gtttttgcgg gaccggagta attctgtccc
     7861 tgcggcggcg gggcgctagg gctgaactcg tgctttcgtg ggaccgtgga atgtgggttt
     7921 tgtcgggccg ttcctagact tacgctaccc ccgccgctaa ataccccctg aaaacacaag
     7981 ccgcgccgga ctttggagtc ctgcagcggg aagggcagcg caatatcgca acatgagcgg
     8041 cgtcaacgac attcgcaaag gcttcctcga cttcttcgcc aagaacgagc atcaggtcgt
     8101 tccgtcgtcg tcgctcgtgc cgcgcaatga cccgaccctg atgttcacca atgccggcat
     8161 ggtgccgttc aagaacgttt tcaccggcct ggagaaacgg ccctattctc gcgcggtgac
     8221 cgcgcagaag tgcgtgcgcg ccggcggcaa gcataacgac ctcgacaatg tcgggtacac
     8281 cgcgcgccac cacaccttct tcgagatgtt ggggaacttc tccttcggcg actatttcaa
     8341 ggaacgcgcg atcgagctgg cctggacgct tgtgaccaag gactacgctc tgccaaagga
     8401 ccggttgctg atcacggtct atgtggatga cgacgaggcg ttcggactct ggaagaagat
     8461 cgccggcctt cccgacagca agatcctccg catcgcaggc gcggacaatt tctgggcgat
     8521 gggggatacc gggccatgcg gaccgtgctc ggaaatcttt tacgatcacg ggccgcacat
     8581 tcccggcggg ccgcccggct ccccggatgc cgagggcgat cgcttcatcg agatctggaa
     8641 tctcgtcttc atgcagtacg agcagttcga gggcggcaag cgcatcgatc tgccgcgccc
     8701 atcgattgac accggcatgg gccttgagcg cattgccgcc gtgctgcagg gcacgcacga
     8761 caactatgcc atcgatctgt tcgtcagcct gatccgcgtt atcgccgagc tgaccggcgt
     8821 cgatcccgag ggcccgcaga aggcctcgca tcgggtgatc gcggatcacc tgcgggcatc
     8881 cgcgttcctg atcgccgatg gcgtcctgcc ctcgaacgag ggtagaggct atgtgcttcg
     8941 ccgcatcatg cgacgcgcca tgcgccacgc ggagctgctc ggcgccaaag agccgctgat
     9001 gtggaagctt gttcccgcgc ttacgcgcga aatgggtcag gcctattggg agcttctgcg
     9061 cgccgaagcg ctgattacgg aaacgctgaa gctcgaggaa acgcgattcc ggcgcacgct
     9121 cgagcgcggc cttgccatcc tcgacgagaa aagtgccggc ctgaagaagg gcgcgatgtt
     9181 cgacggagag accgctttca cgctctatga cacgtacggc ttccccttgg atctcacgca
     9241 ggatgcgctg cgctcgcgcg gcatctccgt cgatgtcgcc tcctttagcg acgcgatgga
     9301 gcgtcagcgc gaaaaagcac gggcctcatg ggccggctcg ggcgacacgg cgcaggagag
     9361 cgtgtggttt gcgctgcgcg agaggatcgg agcgacggaa ttcctcggct acgaaaccga
     9421 aaccgccgag ggtgttatcg ccgcgctggt caaggacggc agggaagttt ccgagttgaa
     9481 gaaaggcgaa agcggatcgg tgatgatgaa ccagacgccc ttctacgccg agagcggtgg
     9541 gcaggtcggc gacaccggcg agatgcgtcg cgagggcgtc aggcttgtcg tgtccgacac
     9601 tcagaaaaag gccggcgatc tgttcgctca ccttgtgaaa gttgagcagg gcgcggtgaa
     9661 agtcggcgac ccgctgttga tggacgtcga ccacgcgcgg cgcggcgcca tacgccagaa
     9721 ccactcggcc acccatcttc tgcacgaagc cctgcgccag gtccttggcg accacgtcgc
     9781 tcagaaaggc tcactggtcg cgcccgatcg cctgcgcttc gacttctcgc atcccaagcc
     9841 gatgtcgccg gacgaaatcg agcgtgtcga ggacattgcg aacgacatgg tgctgcagaa
     9901 cagaccggtg acgacccggc tgatggcggt cgacgatgcg attgcgtcgg gcgcccgggc
     9961 cttgttcggc gaaaaatacg gcgacgaagt acgcgtggtc gcaatgggcg agggcggcgg
    10021 caacaccatg ggttggtcgg tcgaattgtg cggcggcacc cacgtgcgcc gcaccggcga
    10081 tatcggggtc atttccctgg tcggcgaggc aggcgtggcg gcaggggtgc gtcgcatcga
    10141 ggccctgacc gcaaaagccg ccaggaaggc tgctaacaaa cagcttcaag tcgttaaagc
    10201 tgcggctgca gagcttaaag cgccgcttga agagatgccc ggacgcatcg aagaactcct
    10261 ggacgagcgt aagaagctgg agcgtgaact ttccgaggcg aaaaagaagc tcgctatggg
    10321 cggcggcaag tcagaagctg gcgatgtgcg ccacgtcaat ggcgtcaagc tgttggcccg
    10381 ggccgtctcc ggtatcgaac tcaaggacct gcgcagcctt gccgatgaag gcaaacgtca
    10441 ggtggggtcc ggcgttgttg caatcgtcgc cacctccgag gacggcaagg ccggcattgt
    10501 cgtgggggtc acggacgatc tgaccaagcg tttcaatgcg gtcgaacttg tcaagaaagg
    10561 cgccgaagtg cttggcggca agggcggggg cggtcgaccc gacatggcgc aggcgggcgg
    10621 tccagacggc tccaaggctg aggatgcgtt gaaggcaatc gaagctgcgt tgggtgcgtg
    10681 agcaaaccga gatttgccac cgcggcgccg gcttcccctt cgggagataa tcggggtgag
    10741 ggcgtcaagg attttcaaag cgctgcaggc accgaaccgg cgagcgcctg cgctttgcaa
    10801 cgcccagcgc ataccatcga tcggctaagg atcatgatgt cccgcggtcg taccagaaat
    10861 ctacgccggc gcgtctacca ggtgctcgaa cagggaccga tcggcgacgg tgtcagcaca
    10921 tgggtcgacc gcgcgctggt tgcgatcatt gtgatcaatc tcgtcgcagt ggcgctcgaa
    10981 tccatgccgc aatatgcgac ccactatgcg gtggcatttg actggatcga atacgtctcg
    11041 cttgcggtgt tcacgattga gtatgcgctg cgcctgtggg tcgcggtgga gcacggccca
    11101 taccgccatc tctcgcacat gcgcgcgcgc ctcaaatacg cgaccagcac cgccggcatc
    11161 atcgatttga tcgcggtgct gccgttctgg ttcgcaatgc ttttgcccag cgacttccgt
    11221 ttcgtgctgg tgttccgcat ggtgcggttt ttcaagatcg cgcgctattc gcccgccatg
    11281 cggtcgctgc tcgacgtttt atacaacgag cggcgcgcgc tggtcggctg tcttatcatc
    11341 gctctcggca ccgcgctggt cgccgcatcg ttaatgcacc tggcggaggg aaaggttcag
    11401 ccggacaagc tcggcacgat tcccgatgcg ttctggtggg cgatcgtcac gatcggaacg
    11461 atcggctacg gcgacgtggt gcctgtgacg gcgcttggca agacgatcgc gaccgtgacg
    11521 attttcgccg gcctggtgct gatggcattg ccggtgggca ttgtcgccac tgcttttgcc
    11581 gaccagatcc agcggcggga tttcattgtt acgtggggga tgatttcccg ggtgccattg
    11641 ttcgccgagc tcgatgccgc ggagatatcc gacgtcatgg aactgctccg tgcacaagtg
    11701 gcagaaccag gcgaaatcat tgtgcgcgag ggcgaccccg cgcactcgat gtacttcatt
    11761 gcttcgggcg aggtcgaaat tgccttcaag ggcaagaaga ccccgcttcg cctcggcgtc
    11821 ggtcaattct tcggcgaggt ggcggtgttg cgccgttctc gccggtcggc gaccgtgacc
    11881 gcgatcagcc gatccaatct gctggtgctc gatgcccagg acctgcgggc actgatgcat
    11941 cgcgatccgc gcgtcgccga gcgtattcat gacgtcgtcg agaaacgcgt cggtcgagaa
    12001 gtgacctcct caaagggcga catcgtctcc gaagaaatcg actgaggaaa ccgggccgcc
    12061 tgagttggcg acgagggccc taggccatcg ctttcttgag gttctcatcc accttgtcga
    12121 ggaagccggt ggtcgagagc catttctggt cggcaccgac cagaagcgca aggtcctttg
    12181 tcatagaccc gctttcaacc gtgtcgacgc agactttctc gagcgtggcg gcgaattttg
    12241 ccagcgcatc gttcttgtcg agcttggcgc gatgcgcgag gccgcgagtc caggcgaaga
    12301 tcgacgcgat cgaattcgtc gaggtctcct tgcccttttg atactcacgg tagtgccggg
    12361 tgacggtacc gtgcgcggcc tccgactcca cgatcttgcc gtccggcgtc atcagcacgg
    12421 aggtcatcaa gccgagcgag ccgaagccct gtgcgacgat gtccgactgc acgtcgccgt
    12481 cataattctt gcaggcccag acgtatccac ccgaccattt gagcgcggcg gcgaccatgt
    12541 cgtcgatcag tcgatgctcg taggtgagct tcttcttctc gaactccgcc ttgaattcct
    12601 tatcgaagat ttcctgaaag atatccttga agcgcccgtc atagaccttg aggatggtgt
    12661 tcttggtcga aagataaacc gggtagttac gcgacaggcc gtagttgaac gaggcgcgcg
    12721 cgaaatcgcg gatcgaatcg tcgaggttgt acatcgacag cgcaacgccg gagcccggga
    12781 actgaaagac ctcgtgctcg actttcttgc cgtcgggagc gacataactg agcgtaagct
    12841 tggctttttc cggcacgcgg atgtcggtgg cgcgatactg gtcgccatag gcgtggcggc
    12901 cgatcacgat cggctttgtc cagccgggta ccaggcgcgg aacgttcttg cagattatcg
    12961 gctcgcggaa aatcacgccg ccaatgatgt tgcggatggt cccgttcggc gaacgccaca
    13021 tcttcttgag gttgaattcc ttcacccgcg cctcgtccgg cgtgatcgtg gcgcattaca
    13081 ccgccgcgcc gacttccttg gtcttgttgg cggcgtcgat tgtgatctgg tcgtcggttt
    13141 cgtcgcgctt ctggatgctc agatcgtagt agagcaggtt gatatcgagg taaggatgga
    13201 tcagcttgtc cttgatcagc tgccagataa tgcgtgtcat ctcgtcgccg tccatttcga
    13261 cgacggggtt tgcgaccttg atcttcgcca ttgggggtag aacctttttg aaagttgcgc
    13321 gcagaacgga ggaaaagctt gcgggcgcgg cccctatagc accccaaatc ggagggcgaa
    13381 agcccgcaat ctccggcatt ctttcgctgc gtgcacaggg caggtatacc gcgcgcagga
    13441 gaattgcatg cccggggccg gcaccgacaa aaccaaacgc tggatcgaaa cgccggcgcc
    13501 cgtcgtcgtt ctggtcgagc cgcagcttgg cgagaacatc ggcgcggccg cccgcgccat
    13561 ggcgaatttc ggtctggcgc gtttgcggct ggtgaagccg cagcaaggct ggccgaatgc
    13621 aaaagcgcgc gtgatggccg cgggcgccga ccggatcctg gacaacgcag ttctttacga
    13681 cagcctcaat gaagcgatcg gagattgcac ctttgtgctc gcaacgactg cgcgcaacca
    13741 cgaccaggcc aagccggtga tatccgccga ggcagctgcg tccgagatgg ccgagcgcgt
    13801 gagcatgggc gagagcgttg ccatcgtttt cggccgtgag cgtatcggcc ttgaaaatca
    13861 cgaggtggcg ctggccgacg gcatcgtcac gctgccggtc aatcccgcat tcgcctcgct
    13921 caatcttgcg caggcggtgg tgattgtcgc gtatgagtgg ttcaagcgcg ccggcggcgg
    13981 cgagcttcca ttctccatgc ccgacaaatc tccgccggct gcgaagcggc agctcgatgc
    14041 attcttttcg aatctcgagc gcgagctgga gcgggtcgag tttttccggc ccgaagaaaa
    14101 gcgcggcacg atgagcgtga acctgcgtaa cattttccag cggatgaccc cgacccagca
    14161 ggacatccgc acgctgcatg gagtcatcaa cgcaatcgcg cagggacgca agggcccggc
    14221 gcgcggcggc gtgctcgacc ccacggaagc tcagaagttg cgcgatctgc ttgccgagca
    14281 cggcgggggc agggtgccgg gagagcgggg tccggtgcgc ggcctggcgc ggcttctgcg
    14341 aaggaacccg accgaagcgg aacgcgcact gtggcaggcg ctggtcaatg accgccggtt
    14401 cgccggtcgc ggcttcaagc gccaggtgcc gatcggtccg cacattgttg atttcgtgtc
    14461 gtttccgctc aggtgtgtca tcgagctcgt gccggcgcag gagagtgccg aggcggtcga
    14521 gacgcgcgca caaagacgcg cttatctcgg cgagcgggac tatcgtgtat gcgaggtcgg
    14581 ggcggacgag gtggagcggg atatcaccaa agtcctgaac ggtctttccg cggttgtttc
    14641 gacggagcgc tagtggaaag accgttcgtc cccgcgaaag cggggaccca gctttttgct
    14701 gctctggatt cccgcttacg cgggaatgaa cggaaaatgg gtgtcatccc cccgttcgtc
    14761 cccgcggaag cggggaccca gcttttttgc tgctctggat tcccgcttgc gcgggaatga
    14821 acggatggga attgctgttc tggattcttg cttacggggg aatgaacggg tgccattctg
    14881 gattcccgct gatgatggaa tgaagggcac ttaccccttc aacgctttca gctgcgcgac
    14941 agtggccgcc cgcagcgtgg tctggtcgtt gcccgcaatg atgaaacggt agccgcgcct
    15001 ggccatggcc agcgcacttt cggtatcgcg gcagtagatg cccgggatct tgccggcctt
    15061 tttcgacgcg gcgcagatct tgtcgattgc ctgctcgacc ttggcagctt gtacatcctg
    15121 cgcgctgccg ccgctcagcg cggttgcaag gtcgtagggg ccgacgaaga gggcatcgat
    15181 gccggaagtt gccgcgatcg catcgacatt ggcaagcgcg gttgccgttt cgatcatcgc
    15241 gaacgtgagc gtgccctcat ttgcctcacg catatgatca actggggctg tgcgggggct
    15301 ttgcagcgcc atagcgcgca agggacccca gctgcgctcc cccagcggcg gatatttcgc
    15361 ggcggcggcg aattgccgcg catcatcggc ggtgttgatc atcggcgcga tgattgcttc
    15421 agcaccgaag tcgagcgcgc gagaaacgag ggcaaaatcg ttcagcggta cgcgcactgc
    15481 cggtgccgat ccggcgtgat tgagcgcacc aacgcctgtg atgagggacc ctgtgtccca
    15541 gagcccatgc tgcgcatcga gcacaacggc agcaaagcct tcgcgcgcga tcgtttccgc
    15601 gacgtgagtc gaaccgagca tgcaccacgc gccataaacc gtctcgcccg cgcgcaggcg
    15661 cctggcgaga gcgaagggcg attcggtcat ggcagccttt tgattgtcgt tccggggcgc
    15721 atcgacggtg cggacaggca aggaggcgga gcgcacgccc ggccgccttt cgccgcgcgg
    15781 ttggcctgtc cgcgaataac cggatactgc gtcagccgct ttttttgatc tgcgcgaccg
    15841 cctcggtgag cagttcggtc atccgcgcgc gaatctgctg ctcggtgaca cccttcggct
    15901 ccagatcctt ggtcaccttg cgcaggacgt cggtgtcacc ggcttcctcg aagtcggcaa
    15961 gcacgacctc cttggcgtag gcctcggcat ctgcgccgct tttgcccagg attccggcgg
    16021 cccacaggcc aagcatcttg ttccggcggg ccattgcctt gaatttgagt tcctcgtcat
    16081 gcgcgaattg cttttcgaag ccttcctcgc gcttatcgaa tgtcgtgctc atgccgccct
    16141 cgcgtcacat cgcgtgtaca taaagtttat ttcggccttg catatcgccg gcccagcgtc
    16201 aaggcaacat gggcgagcgt ttttgcggcg aaaatacgaa gtggaaaaca tgacgcaggc
    16261 gtgattgtgc tgcctctacc gatcggctag gttgaattcg tgcccgggcc cctggctgag
    16321 gccagcgctt ccagtccggt cccgcagccg cggatcttgc gaagtcgcac aacaaggagc
    16381 cacggcaacc cgatggactt tcacaaacca cggtacactc ccatgagccg ccgacgccgc
    16441 atttacgaag gcaaggcgaa ggtcctctat gaaggcccgg agccgggaac gttgatccag
    16501 catttcaagg atgacgccac cgccttcaat gccaaaaagc acgaggtgat cgaaggcaag
    16561 ggcgtgctca acaatcgaat ctcggaatat gtattccagc acctcaacga catcggagtg
    16621 ccgacgcact tcattcgccg tctcaacatg cgcgaacagt tgattcgcga ggtggagatc
    16681 attccgcttg agatcgtggt gcgtaatgtc gccgcaggct ccctggcgca gcgactcggc
    16741 atcgaggaag gcacgcagct cccgcgctcg atcatcgagt tctactacaa gaacgacaag
    16801 ctcaacgatc cgatggtatc ggaagagcac atcacggcct ttggctgggc ctcgccgcag
    16861 gagatcgatg acatcatggc gcttgccatt cgcgtcaacg attttctgtc cgggcttttc
    16921 ctcggcgtcg gcatccgtct cgtcgacttc aagatggaaa ccggccggct gtgggaaaac
    16981 gacgtgatgc gcatcgtcgt ggccgacgag atctcgcccg acagctgccg gttgtgggac
    17041 atcaagacca acgacaagct cgacaaggac cgtttccgcc gcgatctcgg cgggctggtg
    17101 gaagcctata ccgaagtcgc caagcgcctg gggatcatgg gcgaaggcga gcgcccgcaa
    17161 ggcaccggcc cggtgctggt gaagagctag gcgctgattc cgttcgtccc cgcgtaagcg
    17221 gggacccaag ctaaatatcg agtgtataag catgcgcgct ctgggttctc gctttcgcgg
    17281 gaacgaacgg gggaggcttt gccgtcctgc cagtaaacgt catgcccgcg catagccgtc
    17341 cgaaggacgg cgtgctttcg cacgcctatg gcgcgggcat ccacgacttc tgcgacatcc
    17401 agcagcgaag acctggatgc cggcacaagg ccgggcatga cgggaagaac gcagcgattg
    17461 gctaaaactt gtacgccagt ccgaccagac cgagcttcag cgtgttgctg aaggtgcctc
    17521 tgtagccgga gctgacgcag ttgttgaaat ccgtggcgct gttgcaggca acggtcgccg
    17581 tcccgagatc gacgtaacgg aattccgcgc gtgcggtcca gtgttgagag aacatgtgct
    17641 cgacgccaac accggccgtc cagccgactt ttgtcttgtt ctcagtaaag gaagctacaa
    17701 ggctgggacc tgaactaggt gtgaaaatta agttgaaccg attgttggca tgcccgaacg
    17761 ctacgccgcc agtgacatag acgagtgtgg aatcgaatgc gagacctgca cggccacgca
    17821 gcgtggccaa ccaattgaca tcaaacgaag tactcagact ttcaaaggta ttcagggcgg
    17881 ctagctggct tgtcctcgcg ccaatccagc tccaatcgcc ttccagacca ttgacaaagt
    17941 tgccctgctg ccagttgtag ccgagcaatc caccgacagt tcctcccgtt ttttcgcgct
    18001 catgaagact ggtaaagagg ctaaagaaaa agtcgctatc gttgaaaaac gtatcatggt
    18061 ggacgatgcc gccttgaatg ccgaggtagc cgccggccca gatcgtgacc ggtagcggcg
    18121 catgagcccg cgcggcggac cagtacgggg cgtggccgcc cccgaatttg taattcactc
    18181 caatcagccc cagcatcagc gcgttgctga actcgccgct gggccgctcg cagggacccg
    18241 tccccggcgt gcaggccaca ccagtttttc cgagatcgac atagcgccac tcagcgcgcg
    18301 cagtccaatt cggcgcgaac atatgttcga tgccggcgcc tacggtccag ccagctttcg
    18361 tctgattttg tgaaaaggaa aaagcgacac cgttggccag caaagcggcg aaagcgcttt
    18421 ctatgtgacc gaaggcaacg cctccggtca ggtaaaacaa ggtcgagtcg agcgcgagcc
    18481 ccgcgcgtcc gcgaatcgtg gaaagccaat tgacatcata cgcagtcgaa aactggcgta
    18541 gggtcgtaag atgagtgctc ttggcgccaa tccgg
//
LOCUS       DATDHO010000194         4659 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_306059, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000194 DATDHO010000000
VERSION     DATDHO010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4659
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306059"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="VIY07_03765"
     CDS             complement(<1..271)
                     /locus_tag="VIY07_03765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380902.1"
                     /translation="MLLTVNLQSATLDLPTLSLVAVCIAGLLGVFLIINWLQQRNVRA
                     LAWWGSADLIGAAAMALASMPDPIIALPSVVPGALTFLACGMIWNG"
     gene            complement(545..1021)
                     /gene="rpsI"
                     /locus_tag="VIY07_03770"
     CDS             complement(545..1021)
                     /gene="rpsI"
                     /locus_tag="VIY07_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEY6380903.1"
                     /translation="MAETMQSLEGLASLKPATPEAPKYEKKVDAQGRAYATGKRKNAV
                     ARVWIKPGSGNILINTKAVEIFFARPVLRMLIQQPLVATNRSGQYDVTCTVSGGGLSG
                     QAGAVRHGLAKALTYFEPDLRGALKRGGFLTRDSRVVERKKYGRAKARRSFQFSKR"
     gene            complement(1023..1487)
                     /gene="rplM"
                     /locus_tag="VIY07_03775"
     CDS             complement(1023..1487)
                     /gene="rplM"
                     /locus_tag="VIY07_03775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEY6380904.1"
                     /translation="MKTYSAKPADIEKKWVTIDATGLIVGRLASIVALRLRGKHKASY
                     TPHVDDGDNVIVVNAAKAILTGRKREQKVYHHYTGFIGGIKERTAKAIMEGRFPERVV
                     EKAVERMLPRGPLGRVQLGNLRVYPGPDHPHEAQKPEKLDVARMNRKNVRSA"
     gene            complement(1632..2066)
                     /locus_tag="VIY07_03780"
     CDS             complement(1632..2066)
                     /locus_tag="VIY07_03780"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEY6380905.1"
                     /translation="MPAAVMNAEEIAKLLHDVFPQGFYPGCGLAIERVDYGSARVRRH
                     FQESYIRPGGTISGPTMMELADFAMYVAVFSAVGPQPLAVTTNLSINFLRKPRQADLV
                     ADARLLKVGKRLAVGEVTIFSDGVPEPVAHVTSTYSIPADGN"
     gene            complement(2139..2450)
                     /locus_tag="VIY07_03785"
     CDS             complement(2139..2450)
                     /locus_tag="VIY07_03785"
                     /inference="COORDINATES: protein motif:HMM:NF022815.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3175 domain-containing protein"
                     /protein_id="HEY6380906.1"
                     /translation="MAKRRTKSRSPRRRGKRWSARVTRESDALTLEKGVFTKSTPRKI
                     AISLKRSADRSRRRKSNSYRSAMSMLTFFINRGGRGLSRARKEKLEKAKDELRQLYGK
                     A"
     gene            2541..3371
                     /locus_tag="VIY07_03790"
     CDS             2541..3371
                     /locus_tag="VIY07_03790"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEY6380907.1"
                     /translation="MRLMNVPTANIAADAAVLLRERENDVAMLVLNRPDARNSLSEAM
                     LIALSSALGDIAADRTVRAVVLAANGPAFCAGHDLKELTSRRSDADGGRAYFHHIMST
                     CSDMMQQIVNLPQPIIAAVQGMATAAGCQLVASCDLAVASRQARFATPGVDIGLFCST
                     PMVALSRNVSRKHAMEMLLTGDAASADDAYRIGLINRVVEPGTEREEAFAFARKIADK
                     SSHVVKIGKEGFYRQAEMDLADAYRYVSEVMVENLMARDAEEGLNAFIDKREPKWEDR
                     "
     gene            complement(3478..3900)
                     /locus_tag="VIY07_03795"
     CDS             complement(3478..3900)
                     /locus_tag="VIY07_03795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380908.1"
                     /translation="MCDYSLHDVASRPAKVGDKLVSTQFPNAITRGFCDPSQPRVAVC
                     LLPGTELAFEKEVECDASFRFLPTRKSPHRVARFRQVNLNRPAAHHDALEFPDGKIVL
                     VTDLCEGQQATVLQLPSTGRPASEEEQREVPETASLIA"
     gene            4083..>4659
                     /locus_tag="VIY07_03800"
     CDS             4083..>4659
                     /locus_tag="VIY07_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEY6380909.1"
                     /translation="MNNSSRVFTKAALKAQAERGSAKAYERRVAEGFPDRITAELTKF
                     IAEQDTAFLATATADGAPYLQHRGGPRGFIKVIDDRTLGFADYRGNRQYITLANLSEN
                     DRAFLFLLDPARRQRIKLWGRARVIEDDHALIERLFDKGYQARPERAILFTIEAWDVN
                     CSSHIVTRFTEAEIGDALATVQSRIAELETEN"
BASE COUNT          958 a         1382 c         1360 g          959 t
ORIGIN      
        1 ctccgttcca gatcatgccg caggcgagga aggtcaatgc gccgggcacc acagaaggca
       61 atgcgatgat tggatctggc atgcttgcca gcgccatcgc cgcagcgccg atcaggtctg
      121 cggaacccca ccatgccagc gcgcgcacat tgcgctgttg cagccaattg atgatcaaaa
      181 agacgccgag aagacccgca atgcacacgg ccaccaacga tagcgtcggc agatccaggg
      241 tcgccgattg cagattaacc gtcagcagca tatcgactcc cgcatgcggc ctgcgcgaat
      301 gccaaaccgt ggccggtaaa ataccgttca ggcagtagaa atccgttgcg gaaatcaggt
      361 ggcttcgatg aaagacttcc tcgaattgta atgaattagg gcacccggaa ttgatgcgtg
      421 ccggcttttg acaagcaaaa catcgcgcct cctaaggtaa acaggctcgc taagattcta
      481 acgatcgaac ttcgaacgca aaaaggcgcg ccgtgggcgc gccttttcgt aatgtatcgc
      541 tcggctagcg cttcgagaac tggaaggaac gccgcgcttt tgcccggccg tatttcttgc
      601 gttcgaccac gcgagaatcg cgagtaagaa atccgccgcg cttgagcgcg ccgcgaaggt
      661 caggctcgaa ataggtcaac gccttggcca atccgtgacg gaccgcgccg gcctggccgg
      721 acaagccgcc tcccgacacg gtgcacgtga cgtcgtattg cccgctgcga ttggtggcga
      781 ccagcggctg ctgaataagc atcctcagca ccggccttgc gaaaaatatc tccacggcct
      841 tcgtattgat gaggatgttt ccggaaccgg gctttatcca aacccgcgcg acggcgttct
      901 tgcgcttgcc cgtcgcatag gcgcgtccct gcgcatcgac ctttttttcg tattttggcg
      961 cttccggcgt ggccggtttg agactggcca gtccttccaa tgattgcatg gtttcggcca
     1021 aattatgcac tcctcacgtt cttgcggttc atgcgagcga cgtcgagttt ctcgggtttt
     1081 tgcgcttcgt gcggatgatc agggcccgga tagacgcgca agttgcccag ttgaacccgg
     1141 ccaagtggcc cgcgtggcag catgcgttcc accgccttct cgaccacgcg ttccgggaaa
     1201 cggccctcca ttatggcctt ggccgtacgc tccttgatgc cgccgatgaa gccggtgtaa
     1261 tggtgataga ctttctgttc gcgcttgcgc ccggtcaaaa tcgctttggc cgcattaacg
     1321 acgatgacgt tgtcgccgtc gtcgacatgc ggcgtatacg atgccttgtg cttcccgcgc
     1381 aggcgcaagg ccacgatcga ggcaagccgt ccaacgatca gcccggtggc gtcgatcgtc
     1441 acccacttct tttcaatatc ggcaggcttg gccgagtacg tcttcatgat gttttccttg
     1501 agaacctagc gccccgagcg ctcaaagcgt cagctttcta gccgacagac gctagattgg
     1561 tcaacgtcaa ggtttgaata atattatcta tttatcagtt acttatacag atggtattta
     1621 gctacccaga cctaattacc atcggccggt atcgaatagg tcgaggtgac atgcgcaacg
     1681 ggttcgggca cgccgtcgga aaagatcgtc acctcaccaa ccgccagccg ctttccgact
     1741 ttcaacaggc gggcatccgc aaccaggtcg gcttgtcgcg gcttgcggag aaaattgatg
     1801 ctgagatttg tcgtgaccgc gagcggctgg gggccaacgg ctgaaaaaac cgcgacgtac
     1861 atcgcgaagt cagcaagctc catcattgtg ggtccggaaa tggtcccccc gggccggata
     1921 taactctcct gaaaatggcg ccgcacgcgg gcgctcccgt agtcgacgcg ctcgatcgcc
     1981 agtccgcagc cggggtaaaa gccttgcgga aaaacgtcgt gcagcagctt tgcgatttcc
     2041 tcggcattca tgacggcagc cggcatgcgc gcctcccctc gccggccgat ccggcgcctt
     2101 ggtcatagac agcggcgctg tcaggtcaat tggggatttc aggccttgcc gtagagctga
     2161 cgcagttcgt ccttggcctt ctcgagcttt tccttgcgcg ccctggaaag tccgcggccg
     2221 ccacgattga taaagaaagt gagcatcgac attgccgacc tgtatgagtt tgatttccga
     2281 cgccggctgc gatccgccga ccgcttcaac gagatggcaa tctttcgcgg agtggatttg
     2341 gtaaagacac ctttctcgag ggtcagggca tcgctttcgc gggtgacgcg cgccgaccat
     2401 cgctttccgc gtcgccgcgg cgacctcgat ttcgtgcgtc gcttggccat ggggcgggct
     2461 aacgcccgaa accatatgca cgttccgagc cttgcatggg ctcgagttcg gattaagatt
     2521 ctggctgatc aggcttggga atgcgactta tgaatgttcc gactgcgaat atcgccgccg
     2581 atgctgcggt tctgctgaga gagcgtgaga acgacgtcgc catgcttgtc ctcaaccggc
     2641 cggacgcccg caacagcttg tcggaagcga tgttgattgc gttgtcgagc gccctgggag
     2701 acatcgcagc cgacaggact gttcgcgcgg tcgttcttgc tgccaacgga cccgccttct
     2761 gtgccgggca tgacctcaag gaactcacca gccgccgcag cgatgcggat ggcggccgag
     2821 cctatttcca tcacatcatg tcgacgtgca gcgatatgat gcagcagatc gtgaacctgc
     2881 cccagccgat catcgctgcc gtgcagggaa tggcgaccgc cgccggctgt cagctggtgg
     2941 cgagttgcga tctcgccgtc gcctcccgcc aggcacgatt cgcgacgccc ggagtcgaca
     3001 taggcctgtt ctgctcgacg cccatggttg cgctgtcgcg caatgtatcg cgcaagcacg
     3061 ccatggaaat gttgctgacg ggggacgccg catccgccga cgatgcctat cgaatagggc
     3121 ttatcaaccg cgtcgttgaa cccggaaccg agcgcgagga agcgttcgcc ttcgcgcgaa
     3181 agatcgcgga caaatccagt cacgttgtaa aaattggcaa agagggattc taccggcagg
     3241 cagaaatgga cctggccgac gcctaccggt atgtttccga agtcatggtc gagaacctga
     3301 tggcgcgcga cgctgaagaa gggttgaacg ccttcatcga caagcgcgag ccaaaatggg
     3361 aggaccgctg agcacccgtg ctcaccgtcc gccttgcgct tttatcgaat gataaaactg
     3421 ctgagagcca tcggggacga tggctctctg attctccagc ccaattcagc catcgtgtca
     3481 ggcgatgagc gaagcagtct cggggacttc gcgctgctct tcttcgctgg caggccgtcc
     3541 ggtgcttggc agttgcaata cggttgcttg ttggccctcg caaaggtcgg tgaccagcac
     3601 gatctttcca tccgggaact cgagcgcatc atgatgcgcc gccggccgat tgaggttgac
     3661 ctggcggaag cgagccaccc tgtgcggtga tttccgggtg ggcaagaaac ggaacgaagc
     3721 atcgcattcg acttcttttt cgaatgccag ctcagtccct ggcagcaggc acacggctac
     3781 gcgcggctga ctgggatcac agaagccgcg cgtgatggca tttggaaatt gagttgagac
     3841 cagcttatcg ccgaccttgg cgggtcggga tgcaacgtcg tgaagactgt agtcacacat
     3901 agaacgcctc ctgtttgtgc acaacctagg cggcgcccct cagccttcag atcgcagcag
     3961 acgagcatga ccaacttatg tcgctgtcac cgcaatcctg cccaaatcaa acttgcgcgg
     4021 ccctaccgtg agcaacagcg agaggctatc tttgttccgc aagctgcggt ggcgataggc
     4081 agatgaataa ttcaagccgg gtcttcacga aggcggcctt gaaggcgcag gcggagcgcg
     4141 gctcggccaa ggcgtatgaa cggcgcgtgg ccgagggatt tcccgaccgg atcacggccg
     4201 agctcacgaa atttattgcc gaacaggata ccgcattttt ggccacggca acagcggatg
     4261 gcgcgcccta tctgcagcac cgcggcgggc cgaggggctt tattaaagtc atcgatgacc
     4321 gaacgctcgg ctttgccgat taccggggga acagacaata cattactctt gcgaatcttt
     4381 ccgaaaatga ccgcgcattt ctgttcctgc tcgatcccgc gcggcgccaa cggatcaagc
     4441 tttggggtcg cgcccgcgtg atcgaagatg accacgccct catcgagcgg ctcttcgata
     4501 aaggctatca agcccgaccc gagcgggcta tcctgttcac aatcgaagca tgggacgtga
     4561 attgctcctc gcatatcgtg acgcgattta ccgaggccga aatcggcgac gcgcttgcca
     4621 ccgttcaatc aaggatcgca gagctggaaa cggaaaacg
//
LOCUS       DATDHO010000195         6084 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_8708, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000195 DATDHO010000000
VERSION     DATDHO010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6084)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6084)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6084
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8708"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            264..1412
                     /locus_tag="VIY07_03805"
     CDS             264..1412
                     /locus_tag="VIY07_03805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380910.1"
                     /translation="MNFRSAWSIFALTIAIGTPAKSGHESPIYPSFYPHEIEIMAMAA
                     DRAADLLLTGKIQAYVGNAPRFVTTPPDSIDNVGSLGSFVIVRVNPTSAKAKDPRSAC
                     AIAEAVIRDLAGKGGDMIVHPYPVTPFNGDYLHYVDLAETAKARILGGGAGPLDSDLH
                     LKVKAGSAFAKSLVRAAWRSEDSDWDAEIVELGAADLIAPASTAINGWSGPAWLRAGW
                     YQTYLLLGELIGNEDLRQRVEPQLQRLKTATYNNAVEHINLERRLVSTLADGCYARVA
                     GYKVKREYFSTVFTAGIENISYDAVTGFNSPMFIRTVKLKDFPWNGWLVLGIDAAPKA
                     AWNPIAGFTDNFGRLMWSAVGDPALIPSPNEQAWMLNRISDVQSSGAK"
     gene            1409..1807
                     /locus_tag="VIY07_03810"
     CDS             1409..1807
                     /locus_tag="VIY07_03810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380911.1"
                     /translation="MTRIMCTGTGVSAFFLRCFLTLSLAAGLGITGAKAEELTFNLRI
                     ENGKLPVNMRLIRVRQGDVVKLRWSTNKQIELHLHGYDIERKVEPGVVAEMTFTARAT
                     GRFPVQEHQAQSGGGHTHGAPIVQVEVLPR"
     gene            1779..4463
                     /locus_tag="VIY07_03815"
     CDS             1779..4463
                     /locus_tag="VIY07_03815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380912.1"
                     /translation="MSRSKFCRASANARRCVSGTIRFLITLSAVCALAAPANAHGFGQ
                     RYDLPLPLSLYLYGTAAVVAVTFVIVGLFIRRPAEARHRPRFDLLSHANGKIIAHPAV
                     ILLVKLVAAGLFVITVTAGFIGDQNPYRNIAPTMVWIIVWVGLAYVSAFVGNLWAVIN
                     PWATIFDGVAWIFRRTGNRSEFSYRLPYPAALGVWPAVFLLLVFSWMELVYPTPAVPK
                     HIACFAAAYSVLTWTGMAMFGRETWIRHGEVFSVVFGTFARFAPAEARTGPRPELILR
                     PFGAGFLDSRSASPSMTAFVLLLLSTVLYDGLLNTPEWTILENAIVTPLRSTGEFNLI
                     VVRSVGLVAFWLLFLGAYTLIAAAMSAAAEASRSPREIAQHFAFTLIPIAIGYHIAHY
                     LVFLLVQGQYIIPLMSDPFGWGWNLLGTAGYRVDIAVVGARFAWYTAVIAVLVGHMIA
                     VYLAHMVAMREFAPRRATLGSQIPLTALMVVFSFISLSILAQPIVERREPARPSAIAT
                     DIIVPSDALLPEPGASRLQAVGPDKLAKVKLTYSVLGSAFHDGTRTGIADILYAYVFA
                     YRWGTQSDASDGRYDPHVDSATASMRRQLVGLRAIGSDAVSRSIRVGDVNFVRELFTI
                     EVYSNSTPENPERDGIVAPPWSTLPWHLIALMEEAVDRGWCAFSRAEATRRGVEWLDL
                     VRSEQMNARLASLVETFQHEGFRPVALQSLVSADEARKRWAALAAFYKTHGHFLVTNG
                     PYQVKRWSAEAVTLEAFRDLTYPLGVGSYDAYAVPRRGYITNVEQTKSRIRLSGDIET
                     IVKFARSYRIERVPIPSVSRDALKRAAPECRYVIVDDSGAVVLAGVVALNDESTFQID
                     LNGKLPSGDYTIMALIAVNGNAMNAAIRFIPTRIVTDG"
     gene            4609..5586
                     /gene="mepA"
                     /locus_tag="VIY07_03820"
     CDS             4609..5586
                     /gene="mepA"
                     /locus_tag="VIY07_03820"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HEY6380913.1"
                     /translation="MYKVIGCFIAVSVVLTCVAAAKNAAQVPLPPSNPLKAAEQEKLN
                     SKPANALFAEKELPSLGKAMAIGYYPRGCLQGGVELPVSGPNWQVMRVSRNRNWGHPE
                     LVKFLERFAPLAAEATGWRGILIGDMAQPRGGPLPFGHRSHQIGLDVDVWFMPMPDRV
                     LSRRERDNIVASNLVAADGKNINGKTWSPSHVAFIRTAAEQPEVERVLVNAAIKKELC
                     RVEGNKDKSWMSKVRPWYGHADHIHVRLKCPDDSPDCRVQPAVPAGDGCDKSLKSWFA
                     DWILRLKIPEISWSAKGLKLKDLPPACTTVLNAPANPANGAPGEQPESR"
     gene            complement(5615..>6084)
                     /locus_tag="VIY07_03825"
     CDS             complement(5615..>6084)
                     /locus_tag="VIY07_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HEY6380914.1"
                     /translation="LQQISYAPVPHQQVEQFFRDVPDFERMLVRSGIRLIKYWFSITD
                     EEQQLRFLMRIHDPMKQWKLSPMDLQSRVRWEDYTRAKEEMFARTNIPESPWFIVEGN
                     DKKRARLNCIDHLLQQISYAPVPHQQVELPVRVFDPDYERQTLPNELYVPQKY"
BASE COUNT         1209 a         1776 c         1776 g         1323 t
ORIGIN      
        1 gagatgggta tttcaatcct tatggctgag tctcatctgg ccgctgcaac acggattgga
       61 gaccggcttt acgctatcga tcgcggcgaa atcattttcc atggatcacc gaaggaggcg
      121 ctcgccaacg agaaagtcgt aaaggcgttg cgcgggtagt gcatgcgggt agtgcattcg
      181 gatctttggg agtacgacag tgggacgccg tctgttcgaa gatggtcaga ccggaaacct
      241 cttcgaatga cagtggtcgc tcaatgaatt ttcgcagtgc ctggagcatt tttgcactga
      301 cgatcgcgat tggtacgccg gccaaaagcg ggcacgagtc gccgatctat ccgtccttct
      361 atccgcacga gatcgaaatt atggccatgg cggccgatcg cgcggcagac ctgctgctca
      421 cgggcaagat ccaggcctat gtcggcaacg cgccgcgctt cgttactacg ccgcccgatt
      481 cgatcgacaa cgttggctcg ctcggttcct ttgtgattgt ccgggtcaat ccgacctcgg
      541 cgaaagccaa ggatccgcgg tccgcctgcg ccattgccga agcggtgatc cgcgatctcg
      601 caggcaaggg cggcgatatg atcgtccatc cgtatccggt cacacccttt aatggcgact
      661 acctgcacta tgttgatctc gcagaaacgg cgaaggcacg cattctgggt ggcggtgccg
      721 ggccgttgga ttccgacctc cacctaaaag tgaaagcggg cagcgctttc gccaagtcac
      781 tggtacgtgc cgcgtggcgc tcggaggatt cggactggga cgctgagatc gtcgagcttg
      841 gcgcagcaga cctcatcgct cccgcgagca ccgccatcaa cggctggtcc gggcccgcct
      901 ggctgagagc cgggtggtat cagacatatc ttcttctcgg ggaactgatc ggcaacgaag
      961 acctgagaca acgggtcgaa cctcagctgc agcgtctgaa aacggccacg tacaacaatg
     1021 cggtcgaaca catcaatctt gagcgcaggc tcgtttctac ccttgccgac ggatgctacg
     1081 cgcgagtcgc gggctataag gtgaagcgcg aatacttcag cacggtgttt accgccggca
     1141 tcgaaaacat ctcctacgac gcggtgacag gcttcaactc gccgatgttc attcgcaccg
     1201 tgaagctgaa ggattttccc tggaacggct ggcttgtgct cgggattgac gctgcgccga
     1261 aggccgcctg gaatccgatt gcaggcttca ccgacaattt cggacgactg atgtggtccg
     1321 cggtgggtga cccggccctc atcccatcgc cgaacgaaca ggcatggatg ctcaatcgta
     1381 tctcggacgt ccaatcgagc ggcgcaaaat gaccaggatc atgtgtaccg ggaccggagt
     1441 ttctgcattc tttcttcggt gctttttgac actttcgctg gcggcaggcc tcggcattac
     1501 cggcgcgaag gccgaggaac tgacattcaa cttgcgcatc gagaacggaa aattgcctgt
     1561 caacatgcgg ctgatccggg tcaggcaagg cgatgtcgtc aaactgcgtt ggagtacgaa
     1621 taagcaaatc gagctgcacc tccatggcta tgacatcgaa cgaaaggtcg aacccggcgt
     1681 cgttgcggaa atgactttca cggcacgcgc gacgggaagg ttcccggttc aggaacacca
     1741 ggcacagtca ggcggcggtc acactcacgg ggcacccatt gtccaggtcg aagttctgcc
     1801 gcgctagcgc aaacgctcgg cgctgcgttt ccggcacgat tcggtttctt atcacgctgt
     1861 cggcggtttg cgcgctcgcc gctccggcaa atgctcatgg ctttggccag cgctatgatc
     1921 ttccattgcc gctctctctt tatctttatg gcacagcggc ggtcgtcgct gtcacctttg
     1981 tcatcgtcgg cctcttcatt cgtcgtccgg cggaagcccg acaccgtccg cgattcgatt
     2041 tgctcagcca tgcgaacggg aaaatcattg cgcatccagc tgtcatcctg ttggtaaagc
     2101 tggttgccgc gggtttgttc gtcatcactg tcacggctgg cttcatcggc gaccaaaacc
     2161 cgtatcggaa catcgcgccg actatggtct ggatcatcgt ctgggtcggc cttgcctatg
     2221 tgtcggcatt cgtgggcaac ctgtgggcgg ttataaatcc atgggcgacg attttcgatg
     2281 gagtcgcatg gatattcagg cggaccggca ataggagcga attttcgtat cgcctgccct
     2341 accccgcagc acttggcgtc tggcccgcgg tgttcctgct ccttgtcttt tcctggatgg
     2401 aactcgtcta tccaactccc gccgtaccga aacatattgc gtgcttcgcg gccgcctatt
     2461 cagtcttaac ctggaccggt atggccatgt tcggccgcga gacctggatt cggcatggcg
     2521 aagtgttttc tgtcgtcttc ggcactttcg cgcgtttcgc gccggcggaa gcgcgcactg
     2581 gtccgcggcc ggaattgatc ctgcggccat ttggcgccgg ttttctcgat agccgcagcg
     2641 cctcgccttc gatgacggct ttcgtgctcc tactgctctc caccgttctc tatgacggac
     2701 ttctaaacac gccagaatgg acgatcttgg agaacgcgat tgtcacaccc ctccgcagca
     2761 ccggcgaatt caacctgatc gttgtgagga gcgtcgggct tgtcgcgttc tggttgctgt
     2821 tcctcggcgc ttacacactg atcgccgcgg caatgagtgc cgccgcagag gcaagccgtt
     2881 cgccgcgcga gatcgcgcag cacttcgcct ttacccttat tccaatcgca atcggctatc
     2941 acatcgcgca ctacctcgtg ttcctcctgg tccagggtca atacatcatt ccgttgatgt
     3001 cagatccgtt cgggtgggga tggaatctcc ttggaaccgc tggatacagg gtcgacatcg
     3061 ccgtcgttgg tgctcgcttc gcgtggtaca ccgcagtcat tgcggtcctt gtcgggcaca
     3121 tgatcgccgt ctatctggcg cacatggtgg cgatgcggga gttcgcacca cgccgcgcga
     3181 ccttggggtc ccagattccg ctcaccgctc tgatggtggt tttcagcttc atcagcctct
     3241 cgattctggc tcagccgatc gtcgagcggc gcgagccagc acgtccgtcg gcgatagcaa
     3301 ccgacatcat cgtcccgagc gacgcattgc tgccagaacc cggagccagc cgcttgcaag
     3361 cagtcggtcc ggacaaactt gcgaaagtaa aattgactta cagcgtgctc ggctccgcct
     3421 tccatgacgg caccaggact ggcatcgcgg atattcttta tgcctatgtg ttcgcgtatc
     3481 gctgggggac gcaaagcgac gcgagtgacg gtcgctacga tccgcacgtc gattccgcga
     3541 cggcatccat gcgccggcag ctcgtcggat tgcgggcgat agggagcgat gcggtctcga
     3601 ggtcgatccg tgttggcgac gtcaacttcg tgcgtgaact gttcacaatt gaggtctatt
     3661 caaattccac gcccgaaaac ccggaacgtg atggtatcgt ggctccgcca tggagcaccc
     3721 ttccctggca tctgatcgcc ttgatggagg aagcagtcga tcgtggctgg tgcgccttct
     3781 cacgggccga ggcgacacgc cggggtgtcg aatggctcga tctcgtccgt tcggagcaaa
     3841 tgaacgcccg gctggcatca ttggtcgaga cgtttcagca tgaaggcttt cgtcccgttg
     3901 cgctgcaatc gctcgtgagc gccgacgaag ctcgcaagcg ctgggcggca ctcgctgcgt
     3961 tctacaagac acacggacac ttccttgtca ctaacggccc gtatcaggtg aaacgctggt
     4021 cggcggaagc cgtcacactc gaggcgttca gggacctgac ctacccgctc ggcgttggct
     4081 catacgatgc ctacgcagtg ccgcggcggg gctacatcac caacgtcgag cagacaaaaa
     4141 gtcggattag gctgtccggt gacatcgaga cgatcgtcaa atttgcccgg agctatcgga
     4201 tcgagcgggt gccgatacca tcggtctcgc gcgacgccct gaagcgggcc gcaccggagt
     4261 gccggtacgt catagtcgac gacagtggtg ctgtcgtgct tgcgggcgtt gttgcattga
     4321 acgatgaatc gacttttcaa atcgatttga atggaaagct ccctagtggc gactacacga
     4381 tcatggccct gatcgccgtc aacggaaacg cgatgaacgc cgctattcga ttcattccca
     4441 cacggatagt cactgatgga taagcgaccg cgccgctact gccccagggt gcgagccgcg
     4501 aactctattg ccgctacgaa tgccataaaa aatgtactgt gaaagaactg agcgagacag
     4561 cggccgcgca tagttgtcag actgaacgtc cgtcttgaag gaaacggcat gtataaagtc
     4621 atcgggtgtt tcatagccgt gtcggtagtg ctgacctgcg ttgccgccgc aaaaaacgcc
     4681 gctcaagttc ctttgcctcc cagcaatcct ttgaaggccg ccgaacagga aaagctgaat
     4741 tcgaaaccgg caaatgcgct tttcgctgaa aaggaactgc caagtctcgg caaggccatg
     4801 gcaatcggct actacccgcg cggctgtctt caagggggtg ttgaactgcc cgtctcagga
     4861 ccgaattggc aggtgatgcg ggtatctcgc aatcgcaatt gggggcatcc ggagctggtg
     4921 aaattcctgg aacggttcgc tccactggcc gccgaagcca ccggctggcg cggcatcttg
     4981 atcggcgata tggcgcagcc gcgcggcggc ccgcttccat tcggacatcg aagccaccag
     5041 atcgggcttg atgtcgacgt ctggttcatg ccgatgccgg atcgagtctt aagccgacga
     5101 gaacgcgata atatcgtagc cagcaatctg gttgccgccg acggcaagaa catcaatggg
     5161 aaaacctgga gtccttccca tgtcgcgttt atccgcacgg ctgccgaaca gcccgaggtc
     5221 gaacgggttc tggtcaatgc tgcgataaaa aaagaactat gccgggttga gggcaacaaa
     5281 gacaaatcct ggatgtcgaa ggtgcgcccg tggtatgggc acgccgacca tatccatgtg
     5341 cgcctgaagt gtccggatga ctcgccggat tgtcgcgttc agccagccgt gccggccggc
     5401 gatggatgcg acaagtcgct caaatcctgg tttgccgact ggattttgcg tttgaagatc
     5461 ccggaaattt cctggtcagc caaaggcctg aagctcaagg atttgccccc ggcgtgcact
     5521 accgtactca atgcaccggc caaccccgcc aatggggctc ccggcgaaca gccggaatcg
     5581 cgatgaggat tggtgcgatc ggtttgtccg cagcctagta cttttgcgga acatagagct
     5641 cgttgggcag cgtttgccgc tcgtagtctg gatcgaacac gcgaacgggc aattcgacct
     5701 gctggtgcgg cacgggagca tatgagatct gctgcaacag atggtcgatg cagttcagcc
     5761 gcgcccgttt tttgtcattg ccttccacaa taaaccacgg cgactccggg atattcgtgc
     5821 gagcgaacat ctcttccttg gccctggtgt agtcctccca gcgcacgcgc gactgtagat
     5881 ccatcgggct gagcttccat tgtttcatcg gatcgtggat gcgcattagg aagcgcagct
     5941 gctgctcctc gtccgtaatc gaaaaccaat acttgatgag cctgataccc gaacgtacaa
     6001 gcattcgttc aaaatcgggc acgtcgcgaa agaactgttc gacctgctgg tgcggcacgg
     6061 gagcatatga gatctgctgc aaca
//
LOCUS       DATDHO010000196         2873 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_453246, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000196 DATDHO010000000
VERSION     DATDHO010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2873)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2873)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2873
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453246"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1349
                     /locus_tag="VIY07_03830"
     CDS             <1..1349
                     /locus_tag="VIY07_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY6380915.1"
                     /translation="RPRKRYMAFTAASVLVLAAFAILLSYDRRVAVIYVATAAAAFVL
                     LRMIAALLMVLARRAPRPRATGLRMALANIHRPSALTPTIVLSLGLGITLLVTVVEID
                     GNLRRQFSNELPLKAPSFYFLDIPTDQSARFADFVLTQAPTAKLEEVPMLRGRIVSAG
                     GTEAEKLKPREDAAWVLQSDRGITYANDIPRGSRLVEGNWWGADYEGPPLVSFEKRIA
                     DGLGLKLGDSVVVNVFGRNITATIANMRAVDWESLGINFVMVFSSNTFRGAPHNHLAT
                     LTYPGGGTPAAETALIRSVAAAFPMVTAVRVKDALDAVGSIVANLVLAIRGASGITLV
                     AAALVLGGALAAGHRSRVYDAVILKTLGATRFRLLTAYGTEYLLIGAATALFGMIGGS
                     LAAWLIVAQLMHLSFIWVPWPAIAAALAAVAVTVILGLAGTYLALGQKPAPILRNL"
     gene            1575..2333
                     /locus_tag="VIY07_03835"
     CDS             1575..2333
                     /locus_tag="VIY07_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011427131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEY6380916.1"
                     /translation="MSDYDRNVAARGIGSAPAIAIDAGLRAYMIRVYNYMAAGVALTG
                     VVAWLTFNAAVVTDAAGRITALTPFGQTIFSGPLAIVLFLGTLGLVFFMSFRINSLQP
                     STALILFLAYAALLGLMLSSVFLAYTGASITRTFFISAASFGALSLYGYTTQRDLSPV
                     GSFLTMGLFGLILAMIVNIFLKSSGLDFAISVIGVLIFAGLTAWDTQRIKEMYSANDD
                     GTVASRKAIMGALTLYLDFINLFLFLLRFVGDRR"
     gene            2484..>2873
                     /locus_tag="VIY07_03840"
     CDS             2484..>2873
                     /locus_tag="VIY07_03840"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6380917.1"
                     /translation="MSKLKIRPAALMDIPAITRIYAHAVEHGTATFELEAPDEAEMAC
                     RMNELTSRNFPYLVAELDGVLMGYAYAGPYRARPAYRFTVENSVYIAPDAQRRGIGKA
                     LLEELIKASTERGFRLMVAVIGDSKQIA"
BASE COUNT          507 a          896 c          851 g          619 t
ORIGIN      
        1 ggcgaccccg caaacgctat atggcattca ccgccgcttc cgtccttgtc ttggcggctt
       61 tcgccatcct gctgtcgtac gaccgccgcg tcgcagtcat ctacgtcgca acagccgccg
      121 ccgcgtttgt attgctgcgc atgatcgctg cgttgttgat ggtcctcgcg cgccgcgcac
      181 cccgcccgcg cgcgaccggg ctgcgaatgg ctttggccaa tattcaccgg ccgagcgcgc
      241 tgacgccgac gatcgttctc tcgctggggc tcggtatcac tctgcttgtg accgtcgtcg
      301 agatcgatgg caatctgagg cggcagtttt caaacgaact accgttgaaa gctccgtcgt
      361 tctatttcct ggacatacct acggatcagt ccgcgcgctt tgcggatttc gtcctcacgc
      421 aggcgccgac cgcaaaatta gaggaggtgc caatgttgcg cgggcggatc gtgtccgccg
      481 gaggcaccga agccgagaag ctcaagccaa gagaggacgc agcctgggtg ctgcaaagcg
      541 atcgaggcat cacttacgcg aatgacattc ctagagggtc aaggctggtg gaaggaaact
      601 ggtggggagc ggactatgag ggcccaccgc tcgtttcatt cgagaagcgc attgccgacg
      661 gcttgggcct caagcttggt gattccgtcg ttgtcaacgt gtttggccgc aatatcactg
      721 cgacaatcgc aaacatgcgc gccgtcgact gggaaagtct cggcattaat ttcgtcatgg
      781 tattttcctc caatacattt cggggcgcgc cgcacaacca ccttgccacg ctgacctatc
      841 ctggcggcgg cacgccggcc gcggagacgg cccttattcg atcggtagct gcggcctttc
      901 cgatggtaac ggcggtgcgc gtgaaggacg ccctcgacgc ggttgggagc atcgttgcca
      961 atctggtgct ggcaatccgc ggagccagtg gaattacctt ggttgcggca gctctggtgc
     1021 tcggtggcgc tcttgccgcc ggtcaccgct cccgggtcta tgacgccgta atcttgaaga
     1081 cccttggcgc cactcggttt cgcctcctaa cggcttacgg caccgaatat ctcctcatcg
     1141 gcgccgcgac cgcactgttc gggatgatcg gcggctcact cgccgcgtgg ctcatcgtcg
     1201 ctcagctcat gcatctgtca ttcatctggg tgccctggcc cgccattgcg gcggcgttgg
     1261 ccgccgtggc ggttacggtc atcctcggcc tcgccggcac ctacctcgcc ctcgggcaaa
     1321 aacccgcgcc gatactgcga aatctctagg ttttgcgaca ttccgccacg gcacccgcgt
     1381 gcccgtccgg aagccatttc cggtataaat accgctaccg gatgttaacg atccgcaatg
     1441 gtgcaagggt catcgtcaag ccacatctag cgccgagact ggccaaccac tagattcgga
     1501 acacgagcgc gacggcaccg tgccggcgcg cgtgacgtgc cggcgaaggc cgggacatga
     1561 gagaggaaac atcgatgtcg gattacgacc gtaacgtagc tgctcgcggc atcggctccg
     1621 cgcctgctat cgcgatcgat gcaggcctgc gcgcctacat gatccgcgtc tacaattaca
     1681 tggccgccgg cgtcgctctg accggcgtcg tcgcctggct taccttcaat gcggcggtgg
     1741 tcaccgatgc ggctggacgc atcaccgcgc tgacgccctt tgggcagacg atcttcagcg
     1801 gacctttggc catcgtgctt ttccttggca cccttggcct ggtgttcttc atgagtttcc
     1861 gcatcaacag tctgcagcca agcacggcgt tgattctgtt ccttgcctat gccgcgttgc
     1921 tgggactcat gctgtcgtcg gtgttcctgg cgtatacagg ggcgtcgatt acccgcactt
     1981 tcttcatatc ggcggcatcg ttcggcgcac tgagcctcta cggctacacg acacagcgtg
     2041 acctctcgcc ggtcggatcg ttcctgacca tgggattgtt cggcctcatc ctggcgatga
     2101 tcgtcaacat attcctcaag agcagcgggc tcgacttcgc gatctcggtg atcggcgtgc
     2161 tgatcttcgc tggcctcaca gcgtgggata cgcagcggat caaggaaatg tacagcgcca
     2221 atgacgatgg cactgtcgca agccgcaagg cgataatggg cgcactgacg ctttatctgg
     2281 acttcatcaa cctgttcctg ttccttttgc gcttcgtcgg cgatcgccgc taggcagcag
     2341 cacaggacaa acctgccaac gccccggccc tgtgccgggg cgttgttgta tgcagtcgtt
     2401 gccgcgatcg atacggcaat ccatgatgca cgcttggcaa attcattgtg gaggcgcggc
     2461 agggccgcgc atgacgatct cgaatgagca agctaaaaat ccggccagcc gcgcttatgg
     2521 atattccagc gattacgcgc atctacgcgc atgcggtcga gcatggtacg gccacgttcg
     2581 agctcgaggc gccggatgag gccgagatgg cctgccgcat gaatgaactc acgtcccgca
     2641 attttcccta tcttgtggcg gagttggacg gcgtattgat gggatatgcc tatgcggggc
     2701 cctaccgcgc caggccggca tatcgcttca cggtcgagaa ctccgtctat attgcaccgg
     2761 atgctcagcg ccgcggcatc ggcaaggccc tgctcgaaga attgataaag gcctcgactg
     2821 agcgcggctt ccgcttgatg gtggccgtca ttggcgattc caagcagatc gcc
//
LOCUS       DATDHO010000197         3567 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_108303, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000197 DATDHO010000000
VERSION     DATDHO010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3567
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108303"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1587
                     /gene="bamA"
                     /locus_tag="VIY07_03845"
     CDS             <1..1587
                     /gene="bamA"
                     /locus_tag="VIY07_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEY6380918.1"
                     /translation="YNADLVEKSVEAMTIQAARQGYAFANVRPRGERNFEAKTINLAF
                     VVEEGARAYIERINIRGNTRTRDYVIRREFDLGEGDAYNRALIDRAERRLKNLNYFKI
                     VKITNEPGSAPDRVVINVDVEEQATGEFSVSGGYSTADGFIAEVSVADRNLMGRGNLG
                     KVSVTYGQRVRGFDLSYVEPFLFGYRMAGGIDVFARQNLASNYISYDSQTIGTNLRLG
                     FALTEEIAFQPRYTFYNQKITLPWQLNNCQFSSNALIKGGTGVNPGNEGGPGNTDTTV
                     NFPNGCYADGEASLAVRKELAQGAVNVSMLGYTVSYNTLDNNRNPTSGLYAELKQDFA
                     GVGGDVNFFRTAGEIRNYYEVFSDIVSVIKLQAGNISPWGSKDLRMLDQFQMGPNLVR
                     GFSPAGIGPRDLTPGTTNDALGGSLYWGATLEAQTPLYFLPKDIGIKFAAFADAGNLW
                     SYKGPTFWDVTGETLTVGLDSASNIRSSVGVGLLWDSPLGPLRFDLAYPLKKYCANGP
                     TGIEVCDRTQIFRFSGGTRF"
     gene            1634..2689
                     /gene="lpxD"
                     /locus_tag="VIY07_03850"
     CDS             1634..2689
                     /gene="lpxD"
                     /locus_tag="VIY07_03850"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEY6380919.1"
                     /translation="MSDTTFLRHSAGLTLEEIAALTGAAPVSPKHSRRIVNIAPLDRA
                     SPSDLTFFDSRNFSKAAASTHAGVCLTTPALAKELPARVAVLTVGEPYRAFVTAARAL
                     FPHALRPSSLSNAGDFSQAHVDKSALTENGVTIEAGAVVGPRAEIGSGSVIGANAVIG
                     AGVRIGRDCSIGANTTVTDALIGDRVIIHPGCKIGQDGFGFVMGGNGHLKVPQVGRVI
                     IQDDVEIGAGTTIDRGAIRDTVIGEGTKIDNLVQVGHNVSIGRHCVVVAQTGISGSST
                     LEDFVVLGARVGLNNNVTIGEGAQIAAISVVHGDVPPGARWGGTPAKPVKQWFREMKI
                     LERLARQQVGGRTAADD"
     gene            2699..3154
                     /gene="fabZ"
                     /locus_tag="VIY07_03855"
     CDS             2699..3154
                     /gene="fabZ"
                     /locus_tag="VIY07_03855"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEY6380920.1"
                     /translation="MNKIVTTLEAADITVIMKMLPHRYPFLMVDRVIDIRGDEHGVGI
                     KNVTINEPHFQGHFPGDPIFPGVLMIEGMAQTAGVLCIASTATKPTSVFFLTIDKAKF
                     RKPVRPGDTIEYHMDRITRRKSMWWYRGEAKVAGQIVAEAEVGAMLSDA"
     gene            3151..>3567
                     /locus_tag="VIY07_03860"
     CDS             3151..>3567
                     /locus_tag="VIY07_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[acyl-carrier-protein]--UDP-N-
                     acetylglucosamine O-acyltransferase"
                     /protein_id="HEY6380921.1"
                     /translation="MTAHMIDPSARIEAGALIGKDVSIGPYCTIGAHVRIGDGCRLMG
                     HVNLAGHTTIGPRTVIHPFASLGSPPQSYSYRGGPTRLVVGADCDIRENVTMNIGSED
                     GGGITEVGDNCFLMVGAHVAHDCKVGNHVVFANDVLL"
BASE COUNT          718 a         1002 c         1107 g          740 t
ORIGIN      
        1 tataacgcgg acctcgtgga aaaaagcgtc gaggcgatga ccattcaggc tgcgcggcag
       61 ggctacgcat tcgcgaacgt ccggcctcgt ggtgagcgca acttcgaggc aaaaaccata
      121 aatcttgcgt tcgtcgtcga ggaaggcgcg cgggcctata tcgagcgcat caatatccgg
      181 ggcaatacgc gcacccgcga ctatgtcatt cggcgcgaat tcgaccttgg cgaaggggat
      241 gcatacaacc gggcgctgat cgaccgtgcg gagcggcgcc tgaagaacct caactacttc
      301 aagatcgtca agatcaccaa tgagcctggt tcggcgccgg accgcgtggt catcaacgtt
      361 gacgttgagg agcaggcaac cggcgaattc tcggtttcag gcggctattc gaccgccgac
      421 ggtttcatcg ccgaggtcag cgttgcggac cgcaacctga tgggccgcgg caatctgggg
      481 aaggtgtcgg tcacttacgg gcagcgcgtg cgcggcttcg atctgtccta cgtcgagcca
      541 tttctgttcg gttatcgcat ggcaggcggc atcgatgtct tcgcgcgcca gaacctggca
      601 tcgaactata tttcgtatga cagccagacg atcggaacca atctgcgcct cggcttcgcg
      661 ctcaccgagg aaattgcatt ccagccgcgt tacactttct ataaccagaa gatcacgctg
      721 ccgtggcagt tgaataactg tcaattttcg agcaatgcgc ttatcaaggg cggtacggga
      781 gtcaatcctg gtaacgaggg agggccgggg aacaccgata ccacggtgaa ctttccaaac
      841 ggctgctatg ccgacgggga agcttcgcta gctgttcgca aggagctggc tcaaggtgct
      901 gtcaacgttt cgatgcttgg ttataccgtt tcctacaaca cgcttgacaa taacaggaac
      961 ccgaccagcg gcctttatgc cgaactcaag caggattttg ccggcgtggg cggcgacgtg
     1021 aatttctttc gcacggccgg cgaaattcgc aactactacg aggtcttttc ggacatcgtc
     1081 agcgtgatca agctgcaggc tggcaacatc agcccgtggg gcagcaagga tctgcgcatg
     1141 ctggatcagt tccagatggg accaaacctc gtccgcggtt tttcgccggc aggtattggg
     1201 ccgcgcgacc tgacgccagg aacgaccaac gatgcgctcg gtggcagcct ttactggggt
     1261 gcaacccttg aggcgcagac gcctttgtac ttcttgccaa aagacattgg tatcaagttc
     1321 gcggctttcg ccgacgccgg caacctgtgg agctacaagg gaccgacctt ctgggatgtg
     1381 accggcgaga cgctgacggt tggcctcgac agtgcttcaa atatccgaag ttcggtgggc
     1441 gtcggcctgt tgtgggattc accccttggg ccactgcgtt tcgatcttgc ttatccgctc
     1501 aagaaatact gcgcgaacgg gccgacggga atcgaagttt gtgaccgcac gcaaatcttc
     1561 cgtttcagcg gcggcaccag gttctgatct tggctgccac tggcggtacc agggatcgaa
     1621 ctgcggcaga tttatgagtg atacgacatt cctgaggcac tcggccggtc tcacgcttga
     1681 ggagattgcc gcgttgactg gtgctgcgcc ggtgtcgccg aagcattccc gccgcatcgt
     1741 caatatcgcc ccactcgatc gcgcatcgcc ctccgatctg acgttcttcg acagccggaa
     1801 tttttccaag gctgccgcct cgacgcatgc aggcgtgtgc cttacaacac ccgcgctcgc
     1861 caaggaactg cccgcgcggg tggcggttct gaccgtcggc gagccatacc gcgcttttgt
     1921 gacggccgcg cgagccttgt tcccgcatgc gctgcgacca tcatcgctgt ccaatgccgg
     1981 cgatttctct caggctcatg tcgacaaaag tgctttgacc gagaacggcg tgaccatcga
     2041 ggcgggcgca gttgtcggtc cgcgcgccga aatcggcagc ggcagcgtga taggagccaa
     2101 tgccgtcatt ggcgccggag tccggattgg gcgcgactgc tcgatcggcg cgaatacgac
     2161 cgtgactgac gctctgatcg gcgatcgggt catcattcat cccggctgca agatcggtca
     2221 ggacggcttt ggattcgtga tgggcgggaa tggccatctc aaagtgccgc aggtcgggcg
     2281 cgttatcatt caggacgatg tcgagatagg ggccggcacg accatcgatc gtggtgcaat
     2341 ccgcgacacg gtcatcggcg agggcacaaa gatcgacaac cttgttcagg tgggccacaa
     2401 tgtcagtatt ggccggcatt gcgttgtcgt tgcgcagacg ggaatttcag gcagctccac
     2461 tctcgaggat tttgttgtgc tgggtgcgcg cgttggactg aataacaacg tcacgatagg
     2521 cgagggcgcg cagatcgcgg ccatcagcgt tgttcatggc gatgtcccgc cgggcgcgcg
     2581 atggggcggt actccagcca aaccggtcaa gcaatggttc cgcgaaatga agattctcga
     2641 gcggcttgcg cggcaacagg ttggcggccg gacggcggcc gatgactgag atcgtgtcat
     2701 gaacaaaatc gtgacaacac tggaggcggc cgacatcacg gtcatcatga aaatgctgcc
     2761 gcaccgttac ccgtttttga tggtcgatcg ggtgattgat atccggggcg acgagcatgg
     2821 cgttggcatt aagaacgtga cgatcaatga gccgcatttt cagggccact ttcccggaga
     2881 tccgattttt cccggggttt tgatgatcga gggaatggcg caaacggcgg gtgtgctgtg
     2941 catcgcctcg acggccacaa agccgacatc ggtattcttc ctgacgatcg acaaggcgaa
     3001 gtttcgcaag ccggtgcgcc cgggagacac aatcgagtat cacatggatc ggatcacgcg
     3061 ccgcaaatca atgtggtggt atcgcggcga ggcgaaagtg gcgggacaga tcgtcgcgga
     3121 agccgaagtc ggtgcgatgc tttctgacgc atgactgccc atatgatcga tccctcggct
     3181 cggatcgagg caggggccct gatcggaaaa gatgtttcga tcggtccgta ttgcacaatc
     3241 ggtgcgcacg tcaggatcgg cgacggctgc cgcttgatgg gccatgtcaa tcttgccggt
     3301 cacacgacga tcggtccccg caccgtcatt catccatttg cttcgcttgg ctcgcctccg
     3361 cagtcgtaca gctatcgtgg ggggccgacc aggctggtgg ttggcgccga ctgcgacatc
     3421 cgcgaaaatg tgacaatgaa tatcggaagc gaggacggtg gcggcatcac cgaggtcggc
     3481 gacaactgtt ttctcatggt gggcgcgcac gtcgcgcacg actgcaaggt cgggaaccac
     3541 gtcgtgtttg cgaatgacgt tcttctc
//
LOCUS       DATDHO010000198         2654 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_306317, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000198 DATDHO010000000
VERSION     DATDHO010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2654
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_306317"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(450..911)
                     /locus_tag="VIY07_03865"
     CDS             complement(450..911)
                     /locus_tag="VIY07_03865"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6380922.1"
                     /translation="MELSLFNDRRNYLPGQASFEELTTQRDNLFRKHPKTQFIMAHFG
                     WHANNLGRLGKLLDAYPNVVTEMGAVLYDIGRQPRAAHDFFVKYQDRILFGKDAYEPS
                     EFPYYWRVLETKDEYFDYYRDYHAFWKLYGIDLPDSVLRKVYSDNSLRLVR"
     gene            complement(1235..2368)
                     /locus_tag="VIY07_03870"
     CDS             complement(1235..2368)
                     /locus_tag="VIY07_03870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6380923.1"
                     /translation="MNRRKFSLLLGATAAAWPLRAYAQQGAQQAVQQQTAAPGNPVPR
                     LDWLARHKEPILEPGLPIIDPHHHLWQRPGWRYLLEDLLADTGSGHNIVATVYMEASS
                     MYRDRGPEEMRPVGEVEFANGVAAMSGSGVFGKTRVASGIVGRADLMLGSRVEPVLTA
                     LMRAGGDRFRGIRHGVSWEAEAATLRPNPLTHAGMLADKKFREGVAVVGRLNLSYDVS
                     LYHTQIGEVADLASALPNTRIVLNHVGGVLGLGSYRSKQDEVFSRWSSSIKALAARPN
                     VYVKLGGLGQSYTALRFDGDAEPPSSEKVAARFRPYIEACIAGFGASRCMFESNFPVD
                     KISYSYHVFWNACKLMAKGASSSEKADLFAGTAARCYRLEGIV"
BASE COUNT          506 a          839 c          798 g          511 t
ORIGIN      
        1 cctcatcgcc cgcaatggca tctatctcca cgaaaacctc gcgaccgagg aactggcgcg
       61 cgacggcgtg tacgagttcg cgtacatgtt cgcgccgctg cgactgaaag gcgcaacagg
      121 ttcacccggc aaccctattg caatcagata gttgtggcgc agcgggccgt aaaggcccgc
      181 cctacacgtg ctcgccgaac gcgtgcagca gcccgaacgg ctcgccaccc tcgggagcaa
      241 gcagcaggcg ccgcaacggg tccatcgcgc cgctggcgtg aaactccagc ctacgcgacg
      301 ataagaacga ttaacgggct tttcgcgcgc gtggttgacg gaatgccgca tatgcggccc
      361 cctcccgcca gcacagcgcc atcttcgcca tgccgcctcc ctcctcgatt gagaaggcga
      421 caaacggcgg cgaaactgtc aggcgcgaat cagcgaacaa ggcgcaggct gttgtccgag
      481 taaaccttcc tcaacacgct gtccggcagg tcgattccgt acagcttcca gaaggcatgg
      541 tagtcgcggt agtaatcgaa gtactcgtcc ttcgtctcga gcacccgcca gtaatacggg
      601 aactccgacg gttcgtaggc gtccttaccg aagagaatcc ggtcctgata cttgacgaag
      661 aaatcgtgcg cggcacgcgg ctgccggccg atgtcgtaca gcaccgcccc catctcggtg
      721 acgacgtttg gataggcgtc gagcagcttt ccaagccgtc cgaggttgtt cgcgtgccat
      781 ccgaagtgcg ccatgatgaa ctgcgtcttc gggtgtttcc tgaacaggtt gtcgcgctgc
      841 gtggtgagct cttcgaacga cgcctgcccc ggcagatagt tacggcgatc gttgaagagc
      901 gacagctcca gccaccgctc gttgtgatag ccgccggttg atgcctgttg ttacctggtg
      961 ttcggggccg aattgttcac aaattgttca acgcgctgtc cgacgtcggc cagtccactg
     1021 tgtcgcccga agggctgatc ggctcgctac tcaagggtgc aatggccgcg ccgggccatt
     1081 gcgcgtggac atgcaggtgc ggctctcccg tatttccgct gttaccggtt tagcacgact
     1141 acgttgagtc cgctccgcgt tgtgatttcc ttggccatgg caaggcggct ccagcctccg
     1201 ccgaaaatag ccacatccaa gggtttgaga ttcgtcaaac gattccctcc agacggtagc
     1261 accgcgccgc ggtgccggcg aacagatcgg ctttctcgct gctgctggcg cctttcgcca
     1321 tcagcttgca ggcattccaa aatacgtgat agctgtaaga gattttgtcg accgggaaat
     1381 tactttcaaa catgcagcgc gacgccccga agcccgcgat gcaggcttca atgtaaggac
     1441 ggaatcgtgc ggccactttt tccgacgatg gcggttcggc atccccatca aagcgcaagg
     1501 cagtgtagct ttgacccagg ccgccgagct tgacgtacac gttgggccgg gccgcaaggg
     1561 ccttgatcga cgatgaccaa cgcgaaaaca cttcatcctg tttgctgcgg taagagccca
     1621 acccaaggac gccgccgacg tgattgagga cgattctggt attgggtaac gcgctcgcaa
     1681 ggtcggcaac ttcgccgatc tgggtatggt agagcgacac gtcgtacgag aggttcaggc
     1741 gaccgaccac cgctacgcct tctcggaact tcttgtcggc cagcatcccc gcgtgggtaa
     1801 gcggattcgg tctaagggtg gcagcctcag cctcccatga gacgccgtgg cggatcccgc
     1861 gaaagcgatc gccccccgcc cgcatcagcg cggtcaaaac cggctccaca cggctgccca
     1921 acatcagatc tgcgcgcccg acgataccgg aggctaccct ggtcttgccg aagacgccgc
     1981 tgccggacat ggccgcgacg ccattggcga actcgacctc gccgactggc ctcatttcct
     2041 ccgggccccg gtcacgatac atcgagctcg cctccatgta cacggtcgcg acaatgttgt
     2101 gaccgctgcc ggtatccgcc agaagatctt ccaacaagta ccgccatccg gggcgctgcc
     2161 acaaatggtg atgcggatcg atgatcggca gtcctggttc gagaatcggt tctttgtgcc
     2221 gcgcgagcca atccaggcga ggcaccgggt tcccaggcgc ggccgtttgt tgttgtacgg
     2281 cctgttgtgc gccctgctgt gcgtatgctc gcagcggcca tgcggccgct gtcgcgccaa
     2341 ggagcaggga aaacttgcgt cgattcacgg atcacctccg ctgctgcggg aaatcgggga
     2401 agcccctcaa tttacctcag gccgagttgg gtgggatgag cgaaggagag aggcgggcca
     2461 gtttttctgc cacggggaac gaggggcggt gcggatcttc tcgatgctca tgccacttac
     2521 tgtcgccgcg ccggctcggc acgcaggact gcggatgctc ggcgcggcgc gccacgccat
     2581 gaactccttg tccttagcgg actcaggcac ctacgccggc tggtggaagg ccgcgccgaa
     2641 tctatggcaa cgct
//
LOCUS       DATDHO010000199         2400 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_57456, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000199 DATDHO010000000
VERSION     DATDHO010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2400)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2400)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2400
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57456"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2384)
                     /locus_tag="VIY07_03875"
     CDS             complement(<1..2384)
                     /locus_tag="VIY07_03875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020181183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HEY6380924.1"
                     /translation="MAVQDWHAMRDRVIAIVTDMKTNPPPLPVDEVAEAIQFLQWLLA
                     DNFTFLGVRDYRFDGRSLEPEFESALGIMRARELRVLKRGNELLEITPEIMAFLQEPR
                     PLIIAKANIHARVHRRVYLDYIGVKRFDASGNLVGEHRIVGLFTSTAYTRAARTIPYL
                     RRKIAAVEARAGYDPSSHSGKVLANVLEQYPRDELFQIDEETLLNFTLAVLQLEERPR
                     VRVLARRDRFDRFVSALVFVPRERYDSHIRAKIGEYLARAFHGRVSAFYPFFPGEGPL
                     VRVHFIIGRSGGAVPELDRGTLEREVSAIIRTWSDGLSRALELVSPPDKARELFNRYR
                     DAFSEGFHEAYAPTVAASDIRVIEGLSEDRPLGVDFHHRLEEEQRAVGLKVWTFARPL
                     PLSERVPILENMGFRVVDERTYKVEPKGGMPVWLHDMLLERADGEMIDLDSGKGRLES
                     AFLMVMRGIAENDGYNALTLHGGLGWRDVALVRTISRFLRQIGVPYSQDYMWTTLVKH
                     AGITAEIVELFHARFDPRAEERRRERQSEITARIEEGLQKVESLDEDRILSRFVNAIQ
                     SAIRTNYFQTENDGQLKPLISLKFESRKLIDLPLPRPLYEIFVYSPRVEGVHLRFGKV
                     ARGGIRWSDRPQDFRTEILGLVKAQQVKNAVIVPVGAKGGFVPKLMPKSASRDVVQAE
                     GVATYKLFISALLDITDNIAPDGKIIRPPSVVHHDGDDPYLVVAADKGTATFSDIANA
                     ISAGHDFWLGDAFASGGSAGYDHKAMGITARGAWEAVKRHFREMDVDIGKTPFSV"
BASE COUNT          498 a          743 c          704 g          455 t
ORIGIN      
        1 acgctgaacg gcgttttgcc gatatcgacg tccatttcgc ggaaatgccg cttcaccgcc
       61 tcccaggcgc cacgtgcagt gatgcccatg gctttgtggt catagccggc cgaaccgccg
      121 gaagcgaagg cgtcgccaag ccagaagtcg tgtccggctg aaatggcgtt ggcaatatcg
      181 gagaaagtcg cagtgccctt gtccgccgcc accacaaggt agggatcgtc gccgtcatgg
      241 tgcaccacgc tgggcggtcg aatgatcttg ccatccggcg caatattgtc ggtgatgtcg
      301 agcagtgcgg aaatgaacag cttgtaagtt gcgactcctt ccgcctgcac gacgtcgcgc
      361 gacgcgctct ttggcatcag cttgggcacg aagccgcctt tggcgccgac cggtacaatg
      421 actgcgttct tgacctgctg cgccttcacc agcccgagaa tctcggtgcg gaaatcctgc
      481 ggccggtcgg accaacggat gccgccgcgg gcgaccttgc caaatcgcag gtgcacgcct
      541 tcaacgcgcg gcgaatagac gaagatctcg tagagcggcc gcggaagcgg caagtcgatg
      601 agtttgcggc tttcaaactt gagcgagatc agaggcttca gctggccgtc attctccgtc
      661 tggaagtaat tcgttcgtat cgccgattgg atcgcattga cgaaacgact gaggatgcgg
      721 tcttcgtcca gactttcaac cttctgcaag ccttcttcta tgcgcgcggt gatttcactc
      781 tggcgctccc gacggcgctc ttcggcacga ggatcaaaac gcgcgtgaaa gagttcgaca
      841 atttcagccg taatgccggc atgctttacc aacgtcgtcc acatgtagtc ctgcgaatac
      901 ggcacgccaa tttgccgcag gaagcgggaa atcgttctga ccaacgcaac gtcgcgccag
      961 ccaagtccgc catggagagt caacgcgttg tagccgtcgt tttcggcgat gccgcgcatg
     1021 accatgagaa atgccgactc aagccggcct ttgccgctgt cgagatcgat catctccccg
     1081 tccgcgcgct ccaggagcat gtcatggagc cagacgggca ttccgccctt cggttcaact
     1141 ttgtaggtgc gctcgtccac aacccggaac cccatgttct ccaggatcgg cacacgctcg
     1201 gacagcggca aaggccgtgc gaaagtccac actttcagac caacggcgcg ttgctcttct
     1261 tccaggcgat gatggaaatc gacgccaagc ggccgatctt cactgagacc ttcgatgacg
     1321 cgtatgtcgc tggccgcaac cgtgggcgca taggcctcgt ggaatccctc ggaaaacgca
     1381 tcacggtaac gattgaaaag ctcacgcgcc ttgtccggcg ggctgaccag ctcgagcgcg
     1441 cggctcagtc cgtcgctcca ggtgcggata atagccgata cctcgcgctc gagggtcccg
     1501 cgatccagct cgggcaccgc tccacccgag cgaccgatga tgaaatgcac gcgcaccagc
     1561 ggcccttcgc cgggaaaaaa cggataaaaa gcagaaacgc gtccgtgaaa tgcgcgcgcc
     1621 aggtactcgc cgatcttcgc gcggatatga ctgtcgtagc gttcgcgcgg cacgaacacg
     1681 agtgccgaga caaagcggtc aaaacggtcg cgccgcgcaa ggacccgcac ccgagggcgc
     1741 tcttcaagtt gaagcacggc cagcgtgaaa ttaagcagtg tctcttcgtc tatctggaag
     1801 agttcgtcgc gaggatattg ctcgagcacg ttcgccagga ccttgcccga atgactgctc
     1861 gggtcatatc cggcacgcgc ctcgaccgcc gcgatcttgc ggcgcagata gggaatggtg
     1921 cgcgcggcgc gggtatacgc agtggacgta aaaaggccga cgatccggtg ctcgccgacc
     1981 agattgcccg acgcgtcgaa gcgcttcacg ccgatgtagt cgagatagac tctccgatgc
     2041 acgcgggcat ggatattcgc cttggcgatg ataagaggac gcggttcctg cagaaacgcc
     2101 atgatctccg gcgtgatctc cagcagttca ttgccgcgct tgagcacacg cagctctctc
     2161 gcacgcatga tgccaagggc actctcaaac tccggctcga gggagcgtcc gtcgaatcgg
     2221 tagtcgcgca caccgaggaa agtgaaatta tccgccagca gccactgcag gaactgaatt
     2281 gcttcggcga cctcgtcaac cggcaaaggc ggcggattgg ttttcatatc ggtgactatc
     2341 gcaatgacgc gatcgcgcat tgcgtgccag tcctgcaccg ccacccgcac ctcaccgagc
//
LOCUS       DATDHO010000200         1793 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_453503, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000200 DATDHO010000000
VERSION     DATDHO010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453503"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="VIY07_03880"
     CDS             <1..389
                     /locus_tag="VIY07_03880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008195531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380925.1"
                     /translation="AATVVKGLGECAESEGVGGCNLRCGGGDDVENDVRQFDCTGSSR
                     NTTSLLLVLDQLKLLRHHDVDLPESRGYMSDGRPPHDRGAGRKGTGSGYGRPLEVMPL
                     EALEDPRLEFALQKAKRPRVIAGVFI"
     gene            complement(405..560)
                     /locus_tag="VIY07_03885"
     CDS             complement(405..560)
                     /locus_tag="VIY07_03885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HEY6380926.1"
                     /translation="MFAALVRFIQEWKRYNQSLNELSRLGDRELADIGISRSDIARVA
                     WNSAHRD"
     gene            824..1591
                     /gene="modA"
                     /locus_tag="VIY07_03890"
     CDS             824..1591
                     /gene="modA"
                     /locus_tag="VIY07_03890"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_function: GO:0030973 - molybdate ion binding [Evidence
                     IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY6380927.1"
                     /translation="MISHSLRAFLLIAGLSVPLQASSAGEVKVLTAGAFRQVVVALVP
                     DFEKQTGTKVIVDNDTAGALQKRIESGEAFDVAVITPAIVDDLTGKGKIAAGTRANLA
                     AVSIGVMVKDGAPKPDVSTVDAFKNALLAAKTVAYIDPASGGSSGIYLDKLLERLGIA
                     DQVRPKAKLKKGGYVADLIVSGEAELGVHQISEIVPVKGAALVGPLPKEIQNTTTYAA
                     GLSASPQNKEAAQALIKIFSGPEAAAVLKSKGMDPAK"
     gene            1595..>1793
                     /locus_tag="VIY07_03895"
     CDS             1595..>1793
                     /locus_tag="VIY07_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012752384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6380928.1"
                     /translation="MRNLDLAADARPVDRRVVITALGIAQILAWGTSFYFPAVFAEPI
                     VAETGWSLGYVVGGTSIGLLTA"
BASE COUNT          369 a          505 c          566 g          353 t
ORIGIN      
        1 aagctgcaac ggtggtaaag gggctagggg aatgcgctga aagtgaaggt gtgggcggct
       61 gcaacctgcg ttgcggtggc ggcgacgatg tcgagaacga cgtccggcag ttcgattgca
      121 ccggcagcag ccgcaacaca acaagtctgc tgctcgtcct cgaccagttg aagctcctgc
      181 ggcatcacga cgtcgacctg ccggagtccc gcggctacat gtctgacggg cggcccccgc
      241 acgaccgcgg tgctggtcga aagggcaccg gcagcggcta tgggcggcct ctggaggtca
      301 tgcccctgga ggcgttggaa gaccctcgac tagagtttgc cttgcaaaaa gcgaaacgcc
      361 cgcgagttat cgcgggcgtt ttcatttgaa atgcgaagtg gaacttagtc gcgatgggcc
      421 gagttccagg caacgcgggc aatgtcggac cggctgatgc cgatatcggc aagctcacgg
      481 tcgcccaggc gcgacaattc gttcaggctc tggttatagc gcttccattc ctggatgaag
      541 cggacaagtg cggcaaacat ggtatcgttc tctctttctc gacatcccga ccaacgtcgg
      601 ccggttgttt cccatggaac atagggatgt tcccgctaat gaaaaccgat aatgttgcgg
      661 tgcagctagg cgttaaatgc atggcaaaaa gccgaccctg taaagggaaa attcagtttt
      721 cggtcgattt gagagagctt tcgcggctgc tgctgtgcaa cctgcccccg cgttaattca
      781 aacagaatgg cctgctttag agccggtctg tagaggagca cctatgatat cgcatagctt
      841 gcgtgccttt ttgctgattg ctgggctgtc ggttccgctc caggcaagtt ccgcaggcga
      901 ggtcaaggtc ctgacggccg gcgccttcag gcaggtcgtc gtggcattag tgcctgactt
      961 cgaaaaacag accggtacca aggtcattgt cgacaatgac accgcgggtg ccctgcaaaa
     1021 gcgcatcgag agcggggaag cattcgatgt cgccgtgatc acgcccgcca tcgtcgacga
     1081 ccttaccggc aagggcaaaa tcgctgccgg cacgcgagcc aatctcgccg ccgtcagcat
     1141 cggggttatg gtcaaggacg gagcgcccaa gccggacgtg agcacggtcg atgctttcaa
     1201 gaacgcgctg ctcgcggcga aaacggttgc ctatatcgat ccggcgagcg gcggctcaag
     1261 cggaatatat ctcgacaagc tgctcgagcg ccttggcatc gcggaccagg tgcggcccaa
     1321 ggcgaagctc aagaaaggcg gttacgtggc cgatctgatc gtcagtggcg aggcagagct
     1381 cggcgtgcac cagatcagtg aaattgtccc cgtcaagggc gccgcgctcg tcggaccctt
     1441 gccgaaggaa atccagaaca ccacgaccta tgccgccggc ttgagcgctt cccctcaaaa
     1501 caaagaggcg gcgcaggcgt tgatcaagat attttccgga ccggaagctg ccgcggtgct
     1561 gaaatccaaa ggcatggatc cagcgaaata gggattgcgc aatttggatt tggccgccga
     1621 cgcgcgcccg gttgaccggc gcgttgtcat caccgcgctg ggcatcgctc aaatcctggc
     1681 gtgggggaca tcgttctatt tccccgcggt gtttgccgag ccgattgtcg ccgagacggg
     1741 ttggtcgctt ggctatgttg ttggcggcac gtcgatcggc ttgctcacgg cag
//
LOCUS       DATDHO010000201         1739 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_207259, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000201 DATDHO010000000
VERSION     DATDHO010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_207259"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..496
                     /locus_tag="VIY07_03900"
     CDS             <1..496
                     /locus_tag="VIY07_03900"
                     /inference="COORDINATES: protein motif:HMM:NF018963.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase-like
                     domain-containing protein"
                     /protein_id="HEY6380929.1"
                     /translation="VLAAAIASDRNEFDSVLRNIRYHNGIVAWRERNHYFFEWCQHNV
                     DNSTCRWVGMQGAVEMEKTVDYQAGLGKRRFAMRVIPSAAFLASKDKLERGDIVGFVS
                     RRPNLDFFHTGLITFDKSGTLLLRHASQRRRRVLDEPMDQFIAVNGVRYVTLLRPQEP
                     RGRA"
     gene            complement(506..1393)
                     /locus_tag="VIY07_03905"
     CDS             complement(506..1393)
                     /locus_tag="VIY07_03905"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEY6380930.1"
                     /translation="MAAQSYDRLEGVIWYDGKLVPWNEANVHVLTHGLHYASCVFEGE
                     RAYGGQIFKSTEHSERLKRSANILDFDIPYSVAEIDAAKKLVVDRNGRKEAYVRPIAW
                     RGSEMMGVSAQSNTIHLAIASWEWPSYFDPEQRLKGIRLDLADYRRPDPKTAPCLAKA
                     AGLYMICTISKHMAERKGYADAMMLDWEGRVAECTGANIFFIKDGKIHTPIADCFLDG
                     ITRQTVIGLARKRGIEVIERRIMPDELTGFSECFITGSAAEVTAVAEIADWNFNPGGI
                     TKTLMDDYTAEVKPKAAAA"
BASE COUNT          337 a          507 c          498 g          397 t
ORIGIN      
        1 cgtacttgcc gccgcgatcg catcggatcg caacgagttc gattcggtct tgcgcaatat
       61 ccgctaccac aacggcatcg tcgcgtggcg tgagcgcaat cattacttct tcgaatggtg
      121 ccagcacaat gtcgacaaca gcacttgccg atgggttggt atgcagggcg cggtcgagat
      181 ggaaaaaacg gtcgactacc aggccggact tggcaagcgg cgttttgcga tgcgggtcat
      241 cccgagcgct gcatttctcg ccagtaagga caagctggaa cgcggcgaca ttgtcggctt
      301 cgtaagcagg cggccaaacc tcgacttttt ccacacaggc ctgatcacct tcgacaaatc
      361 cggcacgctg ttgctccgcc acgcttcgca aagacgtcgc cgtgtgcttg acgaaccgat
      421 ggatcagttt atcgcagtca acggcgttcg ctatgtcacg ctgctgcggc cgcaggagcc
      481 gcgcggtcgc gcctgatgat caacctcagg cggccgcggc tttcggcttc acttcggcgg
      541 tatagtcgtc catcagtgtc tttgtgatgc cgcctgggtt gaaattccag tcggcgattt
      601 cggcaacagc ggtcacttcc gccgccgagc cggtgatgaa gcattccgaa aatccggtaa
      661 gctcgtccgg catgatccgg cgttcaatca cctcgatgcc gcgcttgcgg gccaggccga
      721 tgaccgtctg tcgggtgatt ccgtccagga agcaatcggc aatcggggtg tgaattttac
      781 cgtctttgat gaagaaaata ttcgcgcccg tgcactcggc cactcggcct tcccagtcca
      841 gcatcatggc atcggcgtaa ccttttcgct cagccatgtg cttggagatc gtgcagatca
      901 tgtacaggcc ggcagccttg gcgaggcatg gcgccgtttt cggatcgggg cggcgataat
      961 ccgcaaggtc gagccggatt cctttgagcc gttgctcagg atcgaaatag cttggccatt
     1021 cccagctcgc gatcgcaagg tggatcgtgt tgctttgtgc cgaaacgccc atcatttcgg
     1081 atccgcgcca ggcgatgggg cggacatagg cttctttcct gccgtttcta tcgacgacaa
     1141 gttttttggc ggcatcgatc tcggccaccg aatatggaat gtcgaaatcg agaatattgg
     1201 cggagcgctt caggcgctcg gaatgctcgg tgcttttaaa gatctgaccg ccataagcgc
     1261 gctcgccttc gaatacgcag ctggcatagt gcagcccgtg ggtcaggacg tggacgttgg
     1321 cctcgttcca gggcacgagc tttccgtcgt accaaatgac cccttcaagg cggtcatagg
     1381 actgcgcagc catgatctcc tccttcgcca tttcgcggcg cctcgtcgcc gtgatggcgc
     1441 attttccgcg cccattccat actttgcgtc acccgttaac acccggtatg agtggcaagc
     1501 ggatcgcttg cccgctacgg ggttcacggc gggttgtaag agcacgatcc tttcgtctat
     1561 cgacgggttt ttgtaacata aaaacaaaat atgtcaacat ggctgacata attgcgaccg
     1621 gcaaagcccg cacaggatcc agtgtggccg aacgccctgg cggcggacca gcaccggccg
     1681 aacctatctg ggacatcatc gaacttctgt ttttcgctta tcgcgatttc gttggcgat
//
LOCUS       DATDHO010000202         5592 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_257308, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000202 DATDHO010000000
VERSION     DATDHO010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5592
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257308"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..231)
                     /locus_tag="VIY07_03910"
     CDS             complement(<1..231)
                     /locus_tag="VIY07_03910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013892749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HEY6380931.1"
                     /translation="MSNPKSTASIAGHPIHPMLIPFPIAFFVATFVCDLAYWQTSNAA
                     WATAAIWLLGAGLIMAALAAVVGLVDVLGEPRI"
     gene            710..3178
                     /locus_tag="VIY07_03915"
     CDS             710..3178
                     /locus_tag="VIY07_03915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380932.1"
                     /translation="MPSKGKFPFLAGVFLICMCGLMLQIIVTRVLSVISYYYLAFFAI
                     AMAMFGMTAGSLFIYFRQTLFPRHRLFENLVWISSAFAISVVVSAVVAITTVLTSFSR
                     NTELLMTAVQWGKLVFILATPYVFAGMAIALALTRSPWPVPLVYGVDLVGAATGCLVI
                     LAVLTLIDSVSAWFLVGALGALAAVFFSQAHRVASQAEGPQLAITRVAVLARPWMLAA
                     GFAALALANFAIQPYGLKLSMVKEQLESAETAPIVLWNSFSRIDVGQTKRWPSMWGPS
                     STMPAIEFEERNMQIDGSAGSPMYRFDGDLSKLEFLKYDITNLAYSIRRDGRAAVIGV
                     GGGRDLLSAKYFGFRDVTGVELNPILVNLLTDSLRDYNRVADLPGVRLYVDEGRSWFE
                     RSDQHFDLIQMSMVDTWAATGAGAFSLSENGLYTVEGFRVFFRHLTPTGVFTVSRWYS
                     PGNIGEAGRMVSVVVAALRSEGIGDPQAHLYLAVTDNLATLIVSRAPFSTADLSTLTA
                     TVDSLRFTTIMHPGTRPTSSVMAAILEARTPETLANLSTAYQLDLTPAHDDRPFFFEQ
                     LRISDPKALLSAMRADEGVIRGNFKAISTLAIIIVLSLVLVFATILIPSLPSLRHVEL
                     PTALLGSAYFLLIGLGFMFVEMGLIQRISVYLGHPIYGLAIGLFGIIVSTGFGSLLSS
                     RMSLLTGRRLIVWVGLLSIYIAALPYWLSALINVFASAALPVRAMVALLAIVPSGVLM
                     GFGFPTGMQIVNHIDQRPTPWFWAINGVAGVLASALAVTISIEFSISATLWCGAVCYF
                     LLGPIAVMLSKIGVEAQQLKPKLA"
     gene            complement(3333..3815)
                     /locus_tag="VIY07_03920"
     CDS             complement(3333..3815)
                     /locus_tag="VIY07_03920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006935261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY6380933.1"
                     /translation="MEKAIRFEKPSEVRTAIGKEVCVTDWVTVDQQRIDKFAEATGDF
                     QWIHVDVERAKTSPYGGTIAHGFLTLSLLGGFYEPYLQHAFPFCDLGLNYGLNRIRFT
                     SPVRSGSRLRGRFVLAKVDEVERGLQLTCNITVEIEGQDTPALVAESIVRRYLAKGAR
                     "
     gene            complement(3934..4365)
                     /locus_tag="VIY07_03925"
     CDS             complement(3934..4365)
                     /locus_tag="VIY07_03925"
                     /inference="COORDINATES: protein motif:HMM:NF025793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019239 - deaminase activity [Evidence
                     IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEY6380934.1"
                     /translation="MSQLDRRRFAIMAAGSFAAFFQTGRPSDAFDAKQQPFVAEAARM
                     KQQAIASGDQPFGAVVVMDDRIVGYGPSRVVTDGNPNAHAERVALWDAQRRVGSRNLS
                     GAVIYSTSRPCLACEKALADSNIERMFFGPEATDAGKPGRT"
     gene            complement(4441..>5592)
                     /locus_tag="VIY07_03930"
     CDS             complement(4441..>5592)
                     /locus_tag="VIY07_03930"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY6380935.1"
                     /translation="GFKVAMRGQGHSFFGQTQVADGVVVDSSSLNAVRIVKSGAGGTA
                     EIGSGSKWHPVLMAANAEKLTVPVIADTFLSVGGTISTGGFGVTTYNLGLQVDHVQEL
                     EVVTGEGQIVTCSDARNSDLFNAMLGGLGQCGIITKVVMRLMAAPTNVLFIKMDYDDF
                     QSASADLALLAKDGRFQHLDGRGAARPTGGVGYYVEGGAFYDAPNGPDEAKLTAGLKF
                     AKKTATVMTYEQYFRREEVCTACTTPLQKPFVYLCLPASRYVEYTSGILSSPTESAFL
                     VPRMSAWRRATIKRPLTRMPDEEIIYRFQLSRTLPAGTDTASMITLNRTLYERVRDMG
                     GYRMTSSAVEMSQDDWKRHYGPAWQIVEAAKTKFDPKNVLTPGHGMFPS"
BASE COUNT         1063 a         1645 c         1598 g         1286 t
ORIGIN      
        1 gatgcggggt tcgccaagga catccacaag acccacaaca gcagcgagcg cagccataat
       61 gagacccgca cccagcagcc aaatcgccgc ggttgcccac gcggcgttcg atgtttgcca
      121 atacgccagg tcgcaaacga acgtggcaac gaaaaatgcg ataggaaacg gaatgagcat
      181 cggatggatg ggatgacccg cgatgctagc ggtgcttttc ggattggaca tggcgacctc
      241 cgtcgctgcc ccgaacgcag ttttaacgca acccaaacga gcatgttccg cttttaagga
      301 acggccagtt ggcccggcgt gggtgagccc tcaactgcgt tatgtccgct ttgagtcatt
      361 agcggacatt tcgcagtgca atcggcatgt ccgcgccccc gaaggcggac atctcccagc
      421 gggatggcat gtctgctaag ggccaatagc ggaacattaa cagtttgctt ggccttgctt
      481 tgtccgcttt ggatcaacca gaccaaactg gtgaacggat ttccagcacg cgcggagctg
      541 tgaataaccc atacgagatg tcgtgcgcgc tccttggcgc tgccagcatg acttgcgcgt
      601 ggtgccagca ctcgacttga ctcaatttac ttcaaaggca agtttaactg ctcgacgttt
      661 cctgccgaac acgcttccct aatgatggcc ctggttgagg cgtagagcga tgccgtccaa
      721 aggtaagttt cccttcctgg caggcgtttt tctgatctgc atgtgcggat tgatgttaca
      781 aatcatcgtg acgagagttc tctcggtcat ttcttattat tatcttgcct tctttgctat
      841 cgccatggcg atgtttggca tgacggccgg atcgctcttt atctactttc ggcagactct
      901 ctttcccaga cacagactgt ttgagaattt ggtttggatc tcctccgctt tcgcaatatc
      961 ggtcgtcgtg tcggcggtgg tcgcgatcac gacggtgctc accagtttct cgcgaaatac
     1021 cgagcttctc atgacggcgg tgcagtgggg caagctggta ttcattctgg cgaccccgta
     1081 cgtcttcgcc gggatggcga tcgccctggc attgacgcgc agtccgtggc cggtgccgct
     1141 tgtctacggt gtcgacctcg tcggggcggc aaccggctgt ctcgtcattt tggccgtcct
     1201 gacgctcatc gattctgtat cagcctggtt tctggtcggg gctctcggag cattagcagc
     1261 agtttttttt tcgcaagcac accgcgttgc cagtcaagcg gaggggccgc agttggcaat
     1321 cacgcgcgtc gcggttctgg cacggccatg gatgcttgcc gcagggtttg ctgccctcgc
     1381 attagcaaac ttcgcaatcc agccgtatgg cctgaagctc tcaatggtga aggagcaact
     1441 cgagagtgcg gagactgctc cgatcgttct ctggaattcg ttctcgcgca tcgacgttgg
     1501 ccaaactaag cgatggccgt caatgtgggg accgtcgtcg acgatgccag cgatcgaatt
     1561 tgaggaacgc aatatgcaga tcgatggatc tgcagggagt ccaatgtatc gcttcgacgg
     1621 tgatttatcg aaactggaat tcctcaaata cgacatcacg aacctggcct attcaattcg
     1681 ccgtgatgga cgagcggcag tgataggtgt cggcggcggc cgagatctgc tttcggcgaa
     1741 atatttcgga tttcgcgatg tcaccggggt tgagctcaat ccgatactcg tcaacctgct
     1801 gaccgacagc ttgcgcgact acaatcgcgt tgcggacctc ccaggcgtac ggctttacgt
     1861 cgatgaggga cgaagctggt tcgagcgttc ggatcaacat tttgatttga tccagatgag
     1921 catggtcgat acttgggcag cgacaggagc gggcgcgttc tcactttccg agaacggcct
     1981 ctatacggtt gagggattcc gcgtcttttt caggcatctc acgccgacgg gcgtgttcac
     2041 cgtgtcgcgc tggtattcac cgggcaacat tggcgaggcc gggcgcatgg taagcgtcgt
     2101 ggtcgccgct ctccgcagcg agggcattgg cgatccgcaa gcgcatctct atctcgcagt
     2161 taccgacaac cttgcaaccc ttattgtatc gcgcgcgccc ttcagcacag ccgacctctc
     2221 gacattgacc gcaacggtcg actcgcttcg gttcacgaca atcatgcacc cggggacgcg
     2281 cccgacgtcc tcagtcatgg cagcaatcct tgaggcacga acccccgaaa cgttggcaaa
     2341 tctatcgacc gcttaccaac tcgatttgac tcctgcccat gacgatcggc cgttcttttt
     2401 cgagcagctt cggataagcg atcccaaggc tttgctgagt gccatgagag ccgacgaggg
     2461 cgtgatccgc ggtaatttta aggccatatc tacgctcgct attatcatcg tcctttcgct
     2521 ggtactcgtc ttcgctacga tactcattcc gtcgctgccc tcgctccgcc acgtcgaact
     2581 gccgaccgca ttgctcggct cggcttattt cctgcttatc ggtctcgggt tcatgtttgt
     2641 ggaaatgggg ctcattcagc ggatttctgt gtatctcggc catcccatct atggcctcgc
     2701 catcgggctc ttcggcatta tcgtgtcgac cggcttcggc agtctgctgt cgtcgcgcat
     2761 gtcccttttg accggtagac gactgatcgt gtgggtcggc ctacttagca tttacatagc
     2821 cgccctgcct tattggctct ctgctcttat caacgtcttc gcctcggcgg cgctgcccgt
     2881 gcgcgcgatg gtagcgcttt tggcgatcgt cccgtccggc gtgctcatgg ggtttgggtt
     2941 tccgacagga atgcagatcg tcaaccacat cgaccagcgt cccaccccat ggttctgggc
     3001 aatcaacgga gtcgcaggag tgcttgcatc agcgctggcc gttaccatca gtatcgagtt
     3061 ctcgatcagc gcaacgttgt ggtgtggtgc ggtctgctat ttccttctcg gcccgattgc
     3121 agtcatgctc tccaaaattg gggtcgaagc gcaacaattg aagccaaagc ttgcttaact
     3181 ttaccccgcg agcattctgc gaagtcgata tcggcgtgcc gcggctcgac gagatgtcga
     3241 cgacggccta cacgtggtgg aggcagaccc acaaagtaat attcggctcg aaccatcagt
     3301 tccgattatc gcccggacgc gcatcatcgc tgtcagcgcg cgcctttcgc gaggtatctc
     3361 cgcacgatcg attcggcgac gagcgccggc gtgtcctgcc cctcgatctc gacggtgatg
     3421 ttgcacgtca actgcagacc gcgttcgacc tcatctactt tggccagcac gaaacgaccg
     3481 cgtagtcggc tcccgctgcg cacgggcgag gtgaagcgaa tcctgttgag cccgtagttc
     3541 aagcccaggt cgcagaacgg aaacgcgtgc tgtaggtagg gttcgtagaa cccgccgagc
     3601 agcgacagcg tcaggaagcc atgcgcaatc gtgccgccgt acggcgatgt cttcgcgcgc
     3661 tcgacatcga catggatcca ctggaagtcg ccggtcgcct cggcgaactt gtcgatgcgc
     3721 tgctgatcta ccgtgaccca gtcggtcacg cagacctctt taccgatggc ggtgcgcacc
     3781 tcgctcggtt tttcgaagcg gatggctttt tccatctatc ggctccttgg cggcttgtag
     3841 tagggcgcag tgctgcccgg gatgaggtgc gtctattgat ggccgctttg cccgtcaggc
     3901 atatttgatt ggagatatcg ttttttggcc tgtctatgtg cgtccgggtt tgccggcgtc
     3961 ggtggcctcc ggcccaaaaa acatccgctc aatattgctg tcggcgagcg ccttctcaca
     4021 agccaagcag ggccgggaag tcgaatagat taccgcgcca gaaagattgc gactgcccac
     4081 tcgacgttgg gcatcccaaa gcgcaacacg ctcggcatgt gcattgggat tgccgtcggt
     4141 caccacgcgg ctcggcccgt atccgacaat cctatcatcc atcaccacaa cggcaccgaa
     4201 tggttgatcg ccgcttgcga tggcctgttg cttcatgcgt gcggcttccg caacaaacgg
     4261 ttgctgcttg gcgtcaaatg catcgcttgg ccgacccgtc tgaaaaaagg cggcgaaact
     4321 gcccgctgcc attatcgcaa aacggcggcg gtctagttgt gacatgtgta gtccgtggtt
     4381 catttttcca ttagccgaca ttgcgggcga cgactgcggc gggctcgagc attcactatc
     4441 ttaactggga aacatcccgt gacccggcgt cagcacattc ttcgggtcga atttcgtctt
     4501 cgccgcctcg acaatctgcc aggcaggtcc gtagtggcgc ttccaatcgt cctgcgacat
     4561 ctcaaccgcg ctcgacgtca ttcggtagcc gcccatgtcg cgcacccgtt catagagcgt
     4621 gcgattgagc gtgatcatgg aggcggtgtc agtcccggcc ggcagggtgc gtgagagttg
     4681 gaaccggtaa atgatctctt catcgggcat gcgggtgagc ggacgtttga tggtggcacg
     4741 gcgccacgcc gacatgcgcg ggacgagaaa cgcggactcc gtgggcgatg acagaattcc
     4801 cgacgtatac tcgacgtatc gcgacgcggg aagacagaga taaacgaatg gcttctggag
     4861 cggcgtagtg cacgccgtgc aaacttcctc gcggcggaaa tattgctcgt aggtcatcac
     4921 agtggcggtc tttttcgcga acttgagccc agcggtcagc ttcgcctcgt cgggaccgtt
     4981 tggtgcgtca tagaaggcgc ccccttccac gtagtatccg acgccaccgg tcggccgggc
     5041 tgcgccacga ccgtcgagat gctgaaagcg cccatccttc gcaagcagcg cgagatcggc
     5101 ggatgcgctc tggaagtcgt cgtagtccat ttttatgaac aacacatttg ttggcgcagc
     5161 catcagccgc atcacgactt tcgtgatgat gccgcattga cccagacccc caagcatcgc
     5221 gttgaagaga tcgctgttgc gcgcgtcgga gcaggttaca atctgaccct cgccggtcac
     5281 gacctcaagc tcctgcacgt ggtcgacctg aagaccaagg ttgtacgtgg tcacgccgaa
     5341 tccgccggtg ctgatcgttc cgccgaccga caggaatgta tcggcaatca ccggcacggt
     5401 gagtttctcg gcattcgcgg ccatgaggac agggtgccac ttggagccgg accctatctc
     5461 cgcggtcccg cccgcgccgg atttgacaat gcggacggca ttcaggctac tggagtcgac
     5521 tacaacgccg tccgcgactt gagtttgccc aaaaaacgaa tgtccctggc cacgcatcgc
     5581 gaccttgaat cc
//
LOCUS       DATDHO010000203         1781 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_257318, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000203 DATDHO010000000
VERSION     DATDHO010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1781
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257318"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..699)
                     /locus_tag="VIY07_03935"
     CDS             complement(<1..699)
                     /locus_tag="VIY07_03935"
                     /inference="COORDINATES: protein motif:HMM:NF012935.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6380936.1"
                     /translation="MTDGDAARPFPQARVVGGGSSVMGMIALRGLPSDYDGWEARGAR
                     NWGWRDVLPYFRAMTCDLDRSGRERNTSGPNIIHRLPREKWPLYMRRIEAAVASRGMK
                     SLSDINETAEDGFFATPLSQDRERASSARCYLTPEVRRRPNLKIMTSTGVRNLRIEND
                     RVCGITVKHDGETVILSGSEVVVCAGAVHSAALLLRSGIGSATELKALGIESVAHRPG
                     VGKNYQNHSLLHFAM"
     gene            complement(696..1031)
                     /locus_tag="VIY07_03940"
     CDS             complement(696..1031)
                     /locus_tag="VIY07_03940"
                     /inference="COORDINATES: protein motif:HMM:NF017634.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lycopene cyclase family protein"
                     /protein_id="HEY6380937.1"
                     /translation="MVGILLSTGDRLARITSAIYRPMFDRPAVAPTARIRPPQDTFME
                     HSDILVVGAGSAGAAMAARLSEEPTLRVTLVEAGRDTVPGEVPDDIKDISRARFSTAN
                     TSGPISLPA"
     gene            1251..1691
                     /locus_tag="VIY07_03945"
     CDS             1251..1691
                     /locus_tag="VIY07_03945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012254246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6380938.1"
                     /translation="MTIRDPLVADEQAWRQLWSGYNAFYEANVPEAVTARTWQRILDP
                     NSPIFCRLAEVDASQPVGFSICVLHEGTWTVTPICYLEDLFVNPQFRLAGIGRRLIQD
                     VVDRARANQWSQVYWHTRVGNPARRLYDKFAQADDFVRYRLLLQ"
BASE COUNT          357 a          530 c          526 g          368 t
ORIGIN      
        1 catcgcgaaa tgcaggagcg agtggttctg atagttcttc ccgacgccgg ggcgatgcgc
       61 gaccgattcg attccaaggg ccttcagctc cgtggccgac cctattccgg agcgcagcag
      121 cagcgccgcc gaatgcacgg cgcccgcaca caccacgacc tccgagccag acaggatcac
      181 ggtctcgccg tcgtgcttga cggtgatgcc gcacacgcgg tcgttctcga tccgcaggtt
      241 gcggacgcca gtgctggtca tgatcttgag gtttggccgg cggcggactt ccggcgtgag
      301 atagcagcgt gcgctgctcg cccgttccct gtcctggctg agcggggttg cgaagaatcc
      361 gtcttccgcg gtttcgttga tgtccgaaag cgacttcatc ccgcggcttg ccaccgccgc
      421 ctcgatgcgg cgcatgtaga gcggccactt ctcgcgcggg aggcgatgga tgatgttggg
      481 gccgctggtg ttccgctccc gaccggaccg gtcgaggtcg caggtcatcg cgcggaaata
      541 cggcaggacg tcgcgccaac cccagttgcg tgcgcctctg gcctcccagc cgtcatagtc
      601 cgaaggcaag ccgcgcagcg cgatcatgcc catgacgctc gaaccgccgc ccacgacgcg
      661 cgcctgcgga aaagggcgcg ccgcatctcc gtcggtcagg ctggcagtga gattgggcca
      721 gaagtattcg cggttgagaa acgagcgcgg gaaatgtcct tgatgtcgtc cggcacctcg
      781 ccgggcaccg tgtcacggcc cgcctcgaca agcgtgactc ggagcgtggg ctcctccgac
      841 agccgagcgg ccatcgcggc cccggcggag cctgcaccga caaccaagat atcgctgtgc
      901 tccatgaacg tgtcctgcgg tggtcgaatg cgtgccgtcg gggcgacagc gggccgatcg
      961 aacatcggac gatatattgc gctggtaatc ctggcgaggc ggtcgcctgt tgacaacaaa
     1021 atgccaacca ttggtattta gcgccaagat cgttggattg atcagcaata aaattatcca
     1081 gaaaggactg gcatttctcg ccaaccatca gactggttat tcaatcacct tgatgttctt
     1141 ctggccagat aatcctggag catccccatt ttgcctaacg tggtaaggcg gcccccaaaa
     1201 tggagacaaa tcaagttcgg cacttaggaa caaccgggat gcatctgaca ataactataa
     1261 gagatccgct ggtagcggat gagcaggcct ggaggcaact ctggtcagga tacaatgcgt
     1321 tctacgaagc caatgtaccc gaagctgtca ctgcgcgaac ctggcaacga atcctcgatc
     1381 cgaattcacc gatcttttgc cgtctggctg aggtcgacgc ttcccaacca gtaggtttta
     1441 gcatctgtgt gttacatgaa ggcacatgga cggtgacgcc catctgctat ctcgaagatc
     1501 tatttgtaaa tccgcagttc cggctcgctg gcattggtcg gcgtctgatc caagatgtcg
     1561 tagatcgggc gcgagcgaac caatggtcgc aagtctattg gcacacgcgc gtcggtaacc
     1621 ccgcccgccg tctctatgat aaatttgcgc aggcggacga tttcgtccgt tatcgcttgc
     1681 tgctgcaata gtggtccttt ccgaaaatca tatccgagcg tattggtgat gcaattccat
     1741 ttgacaacaa gaattctggc caagcgcatc ggtttgccgt t
//
LOCUS       DATDHO010000204         5693 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_108691, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000204 DATDHO010000000
VERSION     DATDHO010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5693
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108691"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..796
                     /gene="miaA"
                     /locus_tag="VIY07_03950"
     CDS             <1..796
                     /gene="miaA"
                     /locus_tag="VIY07_03950"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEY6380939.1"
                     /translation="LRIITARPAPEEEARVLHRLYGHVDAAENYSVGRWCRDAEEALN
                     SAAGQRRVPIFVGGTGLYFKALTTGLAAVPPIPADIRAEIRSRLQREGAPALHAELMG
                     RDPATAQRVTANDRSRISRALEVVLATGRALSDWHREGLPPILDANRTAKVFLICDRK
                     ELVRRIEGRFAAMLKSGALEEVRRLAARNLDPSLPAMKAHGVPWLVRHLKGDIALKAA
                     EAGAVMDTRRYAKRQLTWFRNQMKDCPWETSKNAFSSLESQLSRLK"
     gene            1008..2768
                     /locus_tag="VIY07_03955"
     CDS             1008..2768
                     /locus_tag="VIY07_03955"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HEY6380940.1"
                     /translation="MTREMTGAEMVIQALADQNVEHVFGYPGGAVLPIYDAIFSQNHV
                     RHILVRHEQGAVHAAEGYARSTGKVGCVLVTSGPGATNAVTGLTDALCDSIPIVCITG
                     QVPTHLIGNDAFQECDTVGITRPCTKYNYLVKRIEDLPRVLHEAFHIASSGRPGPVVV
                     DIPKDIQFARGVYSKPKDFPHTGYKPRLKGEMTKIKQAIDLMAHAKRPLFYTGGGVIN
                     SGRAACDLLRELVKLTGFPITSTLMGLGAFPAADPKWIGMLGMHGTLEANMAMHDCDV
                     MICIGARFDDRITGRLDAFSPGSKKIHVDIDPSSINKNVKVDVPIIGDCAHVLEDLVR
                     LWRTNAIHPDKKTLQAWWAQIDKWRARKSLAYRSSNEVIKPQYAIQRLYELTKDKDVY
                     ITTEVGQHQMWAAQFYRFQEPNRWMTSGGLGTMGYGLPASVGVQLAHPNSLVIDIAGE
                     ASVLMTMQELSTAVQYRLPIKIFILNNNYMGMVRQWQELLHGGRYAESYSEALPDFVK
                     LADAYHAHGIRCVKPGDLDRAIKEMVEVDKPVLFDCVVDPKENCFPMIPSGRAHNEML
                     LGDAGVSVEEAITEEGKVMV"
     gene            2768..3313
                     /gene="ilvN"
                     /locus_tag="VIY07_03960"
     CDS             2768..3313
                     /gene="ilvN"
                     /locus_tag="VIY07_03960"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEY6380941.1"
                     /translation="MNAPTTSHYPAAPTAQKPEPHTLSVLVDNEPGVLARVIGLFSGR
                     GYNIESLTVSETEHRQHLSLITIVTTGTPMVIEQIKNQLDRLVPVHHVVDMTLAGNAI
                     ERELAMVKVKGKGENRVEALRLADAFRARVIDATTESFVFEITGATDKIEQFISLMLP
                     LGLIEVSRTGIAAIMRGPEGM"
     gene            3316..3546
                     /locus_tag="VIY07_03965"
     CDS             3316..3546
                     /locus_tag="VIY07_03965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380942.1"
                     /translation="MGLTILSIPLIILGIFIKPYTTENARCININLGGARPYCFEQGS
                     NMPEIIKYGSVLAGFGLLYAGRLQIKRQRNRM"
     gene            3692..4711
                     /gene="ilvC"
                     /locus_tag="VIY07_03970"
     CDS             3692..4711
                     /gene="ilvC"
                     /locus_tag="VIY07_03970"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEY6380943.1"
                     /translation="MRVYYDRDADLNLIKGKKVAIIGYGSQGHAHALNLRDSGVKEVG
                     VALRKTSAGVKKAEAEKFKVMEVADAAKWADVMMMLTPDELQADIYRDHLAKNMKDGA
                     ALMFAHGLNVHFNLIEPRADLDVLMIAPKGPGHTVRSEYQRGAGVPCLVAIHKDASGN
                     AHDLGLSYASAIGGGRAGIIETTFKEECETDLFGEQTVLCGGLVELMKAGYETLVEAG
                     YAPEMAYFECVHEVKLIVDLIYEGGIANMNYSVSNTAEYGEYVSGPRVITPEVKAEMK
                     RVLADIQSGRFTKDWMLENKVNQTSFKATRAKLAEHPIEQVGAKLRDMMPWIKQRALV
                     DRSKN"
     gene            complement(4754..>5693)
                     /locus_tag="VIY07_03975"
     CDS             complement(4754..>5693)
                     /locus_tag="VIY07_03975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY6380944.1"
                     /translation="LALAVDQLLALVQAGVTRRSTALTLMGSAGLAALIVAALLPGFA
                     QSRAEYSIGAKTFTEQYVLAALIKQRLESAGLSAERRPGLGSSVLFDALASGDVDIAV
                     DYSGTLWLNRMQRKDVPQRDQLLAELSQWLAKTHGVQMLGSLGFENAYALAMDRKKSE
                     AMNIRSISDLAARAGELTVAGDYEIFARPEWAALSAAYGLKFRAERQMQPEFMYRAAA
                     NGEVDVVAAYTSDGQIATYGLAVLDDVKHVIPSYDAILLISPKRTGDAKLTTALNPLL
                     GSIDVATMREANARASKGQETPDTVARWLVEQATKK"
BASE COUNT         1193 a         1675 c         1749 g         1076 t
ORIGIN      
        1 tctgcggatc atcaccgccc gccctgcacc cgaagaggaa gcgcgggtac tgcatcgtct
       61 ctacgggcac gtggatgcag ccgagaacta ttctgtcgga cgctggtgcc gcgacgccga
      121 agaagctctc aacagcgctg ccggccagcg ccgcgtcccg attttcgtcg gtggcaccgg
      181 cctttacttc aaggccctga cgacgggcct cgctgccgtg ccaccgatcc cggccgacat
      241 tcgtgctgaa atccgaagcc gattgcagcg cgagggcgcg cccgccctgc acgcagaatt
      301 gatgggacgc gacccggcga ccgcgcaacg tgtgacggcg aatgaccgct cgcgcatttc
      361 acgcgcgctc gaagttgtgc tggcgaccgg gcgcgcactg tcggactggc atcgcgaagg
      421 cctgccgccg atcctcgatg ccaaccgcac cgcaaaagtt tttctgattt gtgatcgcaa
      481 ggagctcgtg cgccgcatcg agggccgctt tgctgccatg ctaaagtcgg gcgcgttgga
      541 ggaagtccgc cggttggctg cccgcaacct cgacccttcg ctgccggcca tgaaggcgca
      601 tggggtcccc tggttggtcc ggcatctcaa gggcgacatc gcgctcaagg cggcggaagc
      661 tggcgctgtc atggatacgc gccgctacgc gaagcgccag ctcacctggt ttcgcaatca
      721 gatgaaggat tgcccctggg aaacatcaaa aaatgccttt tcgtcgctgg aaagccagct
      781 ttcgcgtctg aaatgatgcg gatttgtcct tgaccgggta ccggacagcc cctataacgc
      841 gcgcaatgaa aattcagatg ataccaatgt tacgcaatat tattactttt gtagtaggaa
      901 atcggacgcg ggcgcggctc tagctggagc cgcaggcggc gtccgaacat ggcccgtttc
      961 gggccttttt tattgctgca ggcgagatga cgacgaaagg gcatgacatg acacgcgaaa
     1021 tgaccggcgc cgaaatggtg atccaggcgc ttgccgatca gaacgtcgag cacgtgttcg
     1081 gctatccggg cggcgcggtg cttccgatat atgacgccat cttctcgcag aaccacgtgc
     1141 gtcacatcct tgtgcggcac gagcagggcg cggtgcacgc ggccgaaggc tatgcgcgct
     1201 cgaccggcaa ggtcggctgt gtgctggtga cctcgggccc cggcgccacc aatgcggtca
     1261 ccggcctcac cgacgcgctc tgcgactcga tcccgatcgt ctgcatcacc gggcaggtgc
     1321 cgacgcacct gatcggcaac gatgcgttcc aggaatgcga caccgtcggc atcacgcggc
     1381 cgtgcacaaa atacaactat cttgtgaagc gcatcgagga tctgccgcgc gttttgcacg
     1441 aggcatttca catagcgtcc agcggccggc cgggacccgt cgtcgtcgat atccccaaag
     1501 acattcagtt cgctcgaggg gtctactcaa agccgaagga ttttccgcac accggctaca
     1561 agcccaggct caagggcgaa atgaccaaga tcaagcaggc gatcgatctg atggcgcacg
     1621 ccaagcgtcc gctgttctat acgggcggcg gcgtgatcaa ttccggccgt gcggcatgcg
     1681 acctgttgcg cgaactcgtc aagctcacag gctttccgat cacatcgaca ctcatgggac
     1741 ttggcgcgtt cccggctgca gacccaaaat ggatcggcat gctaggcatg cacggcacgc
     1801 tcgaagccaa catggcgatg catgattgcg acgtgatgat ctgcatcggc gcgcgctttg
     1861 acgatcggat cacgggcagg cttgacgcgt tttcgcccgg gtcgaagaaa atccatgtcg
     1921 acatcgatcc gtcgtccatc aacaagaatg tcaaagtgga tgtgccgatc atcggcgatt
     1981 gcgcgcacgt gctcgaagat ctggtgcgcc tctggcgtac caatgcaatc catcccgaca
     2041 agaaaacgct gcaggcatgg tgggcgcaga tcgacaaatg gcgcgcgcgc aaatcactgg
     2101 cgtaccggtc gtcgaacgag gtcatcaagc cacaatacgc catccagcgt ctttacgagc
     2161 tgaccaagga caaggacgtc tacatcacca ccgaggttgg tcagcatcag atgtgggcgg
     2221 cacagttcta caggtttcag gaacccaatc gctggatgac atccggcggt ctgggcacga
     2281 tgggctatgg cctcccagcc tcggtcggcg tgcagctcgc ccatccaaat tcgctggtga
     2341 tcgatatcgc cggcgaagct tccgtgctca tgacaatgca ggagctgtcg acggcggtcc
     2401 aataccggtt gccaatcaag attttcatcc tgaacaacaa ctacatgggc atggtgcggc
     2461 agtggcagga attgctgcac ggcgggcgat atgccgaaag ctacagcgaa gcattgcccg
     2521 atttcgtcaa acttgccgat gcctatcacg cacacgggat tcgctgcgtg aagccgggcg
     2581 atctcgaccg cgcgatcaag gagatggtcg aggtcgacaa gccggtgctg ttcgattgcg
     2641 tggtcgatcc caaggaaaac tgcttcccga tgattccgtc ggggcgtgcg cataacgaga
     2701 tgctgctcgg tgatgccggc gtcagcgtgg aagaggcgat caccgaggaa ggcaaggtga
     2761 tggtgtgatg aacgctccca cgacaagcca ctatccggca gcgccgacgg cgcagaagcc
     2821 cgagccccac acgctctcgg tattggtcga caacgagccg ggcgtgctgg cgcgtgtcat
     2881 cgggctgttc tcgggccgcg ggtacaatat cgagtcctta acggtgtccg agaccgaaca
     2941 ccggcagcat ctttctctga tcaccattgt caccacgggg acaccgatgg tgatcgagca
     3001 aatcaagaac cagctcgatc gcctcgtccc ggtgcatcat gtcgtcgata tgacgctggc
     3061 gggcaatgct atcgaacgtg aactcgcgat ggtcaaggtc aagggcaagg gggaaaaccg
     3121 ggttgaagcc ctgcggctgg cggatgcgtt tcgcgcgcgg gtgatcgacg ccaccaccga
     3181 aagcttcgtg tttgaaatca ccggagctac cgacaagatc gagcagttca tcagcttgat
     3241 gctgccgctc gggcttattg aagtttcgcg cacaggaata gcggccatca tgcgcgggcc
     3301 ggaagggatg tagcgatggg tctgaccatc ctgtcgatcc cgttgatcat actcgggata
     3361 ttcatcaagc cttacacgac cgaaaacgcc cggtgcatca acattaatct cggcggcgcg
     3421 cgcccctact gcttcgagca gggctccaac atgcccgaga tcatcaagta cggcagcgtc
     3481 ctcgccggct ttggcttgct gtacgccggc agacttcaga tcaaacgtca gcgcaaccga
     3541 atgtaagtta tttcgtcatg tccggccttg tgccgggcat cgacgtcttg ctatcgacac
     3601 ggcactgaac aaagacggat ggccgggaca ggcccggcca tgactattga ggaaagtggc
     3661 cgggcaacgg gcctaaattg gggtaagtat catgcgtgtt tattatgatc gcgacgccga
     3721 cctgaacctg atcaagggca agaaggtcgc catcattggc tatgggagtc agggccacgc
     3781 tcacgcgctc aatttgcgcg acagcggcgt gaaggaggtg ggggttgcgt tgcgcaaaac
     3841 ctccgccggc gtgaagaagg ccgaggcaga gaaattcaag gtgatggaag tcgccgatgc
     3901 cgccaaatgg gccgacgtca tgatgatgct gacgcccgat gagttgcagg ccgatattta
     3961 tcgcgatcac ctcgcgaaga acatgaaaga tggcgctgcg ctgatgttcg cgcatggcct
     4021 taacgtgcat ttcaatctga tcgagccgcg cgccgatctc gatgtgctga tgatcgcgcc
     4081 caaagggcca ggccacaccg tgcgttcgga atatcagcgc ggagccgggg tgccatgcct
     4141 ggtggcgatc cacaaggatg cttcgggcaa cgctcatgac ctcggtcttt cctacgcgtc
     4201 cgcgatcggc ggcggccgag cgggcatcat cgagacgacg ttcaaggaag aatgcgagac
     4261 cgacctgttc ggcgagcaaa cggtgttgtg cggcggcctc gtcgagctga tgaaggcggg
     4321 ttacgagacg ctggtcgagg ccggctacgc gcccgagatg gcctatttcg aatgcgtcca
     4381 cgaagtgaag ctgattgtcg acctgattta cgagggcggc atcgccaaca tgaactattc
     4441 ggtatcgaac accgctgagt acggagaata cgtctccggc ccgcgagtga tcacgccgga
     4501 ggtgaaggcc gagatgaagc gtgtgctcgc cgacatccag tcgggccgtt ttaccaagga
     4561 ctggatgctg gagaacaaag tcaaccagac ctcgttcaag gcaacgcgcg ccaagcttgc
     4621 cgaacatccg atcgagcagg ttggcgccaa gctgcgcgac atgatgccgt ggatcaagca
     4681 gcgcgccttg gtggacagaa gcaagaactg atcacgctgt ggtcatcgcc gggacaggcc
     4741 agcgatgacc ttgctatttc tttgtcgcct gctccaccaa ccaccgcgcc accgtgtccg
     4801 gggtttcctg accttttgac gctcgggcat ttgcttcccg catcgtcgca acgtcaattg
     4861 atccgagcag gggattgagg gcagtcgtca acttggcatc acccgtgcgc ttgggcgaaa
     4921 tcagcaggat cgcatcgtaa gacgggatga cgtgtttgac atcgtcgagc actgcaagtc
     4981 cataagtcgc aatctgacca tcgctggtgt aggccgcgac gacatcgacc tcgccgttgg
     5041 ctgcggctct gtacatgaat tccggctgca tctggcgttc cgcacggaat ttcagtccat
     5101 aggcggcgct taaagcggcc cattcgggac gagcgaaaat ctcatagtcg ccggcaacgg
     5161 tgagttcgcc ggcgcgggca gcgaggtcgc tgatcgaacg gatattcatc gcctcgctct
     5221 ttttccggtc cattgccagc gcataggcat tctcgaagcc gagtgagccg agcatctgga
     5281 cgccgtgggt ttttgcgagc cattgcgaaa gctcagcgag cagttggtcg cgttgcggca
     5341 catccttgcg ctgcatgcga ttgagccaaa gcgtgcccga gtagtccacc gcgatgtcga
     5401 cgtcgccgga cgcgagcgcg tcgaacagaa cgctggagcc aagccctggc cggcgctcgg
     5461 cagagaggcc ggccgattca agacgctgct tgatcagtgc tgcgagaaca tattgttcgg
     5521 tgaaggtctt cgcgccgatg gaatattcgg cacgagactg tgcgaaacct ggcagcaggg
     5581 cagccactat caacgcggcc agcccggcag accccatcag cgtgagcgcg gtgctgcggc
     5641 gcgtcacgcc ggcctgtacg agcgcaagca actgatcgac cgcaagcgcc aac
//
LOCUS       DATDHO010000205         3236 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_453720, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000205 DATDHO010000000
VERSION     DATDHO010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3236)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3236)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3236
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453720"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            221..787
                     /locus_tag="VIY07_03980"
     CDS             221..787
                     /locus_tag="VIY07_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6101 family protein"
                     /protein_id="HEY6380945.1"
                     /translation="MRCGGCAGSGRALRLDPFGLPVRFSATDTTADGRLRDVELHRER
                     VVLRRSVRGMRMALNMPIAAFDGVSLSLLPREGAAADILAVMLKHSDPALTLPLFLTS
                     QPHEALAEWRAWSEVLGMPRVLAKKHSASVSIAHLGQLHIERPRPRRRRRSALKARRP
                     SILLRRGFGKITEATPVHRGEREIIARN"
     gene            complement(784..1146)
                     /locus_tag="VIY07_03985"
     CDS             complement(784..1146)
                     /locus_tag="VIY07_03985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380946.1"
                     /translation="MRTITAALFFSLLALPALAQTYPVQGRWGQSTNSEKGAINCVGK
                     RVIDFIGNQRTDSNGVPSYRNRSVTAEGPSSYRIVDEFTTGQISAGHTSYILRKVDPD
                     HIELVMEGGALKLQRCKG"
     gene            complement(1235..>3236)
                     /locus_tag="VIY07_03990"
     CDS             complement(1235..>3236)
                     /locus_tag="VIY07_03990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017268205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEY6380947.1"
                     /translation="SKIRIFVRAHIRYAGTDTALVVPAGSAAAMKRSFEKAHRSRFGF
                     VDRAKDLVVEAVSVEAVGGGAKFTEKAVSRSRGTLPKPALRTQFFSAGKWHKANVYTR
                     DQLKPGARVKGAAIIIEPHQTIVVEPGWQAELTAKNHLLLTRATKLKRVHAIGTHADP
                     VMLEVFNNLFMSIAEQMGVSLQNTAYSVNIKERLDFSCAVFAHDGTLVANAPHMPVHL
                     GSMDRAVETIIRENAGRVRPGDVYAINAPYNGGTHLPDITVCTPVFDDRQKTILFWVA
                     SRGHHADVGGISPGSMSPNATTIEQEGVLFDNFKLVDRGRFREKELMAALMGAKYPAR
                     NPVQNINDIKAQIAANEKGVAELRKMVSQFTLPVVKAYMQHVQDNAAESVRRVIDRLH
                     DSEFTYEMDQGTKIKVKITVDKKRREATVDFTGTSEQQPTNFNAPEPVTRAAVLYVFR
                     VMVDDEIPMNAGCLRPINIVIPKRSMLSPEFPAAVVAGNVETSQAVTNCLFGALEALA
                     AAQGTMNNLNFGNARYQYYETICSGSPAGPGFNGTDAVHTHMTNTRLTDPEVLEFRYP
                     VVLEDFHIRPGSGGQGKWHAGNGIRRTIRFLEKMECTILSGHRRVRPFGLAGGEAGQV
                     GENWVRRMDGGMERLQGSDATVIDKDEAVIIQTPTAGGYGAD"
BASE COUNT          602 a          957 c          982 g          695 t
ORIGIN      
        1 tgcgatcgct gtacgttcaa tcgtcgatga ggacaagttg ggcagcgacg gcaacatctc
       61 gtcaatcatg ctttgcaacg gcgcgtcaat cattcgtggc aaaggatccg ccgctacttt
      121 cggttaaccc agaacattaa gcggattcgg acgtgtttcc gccaagattg tcgcgcgacc
      181 cggcacaaaa gtcgggcgcg ggagagtttc gaggcgtcaa atgcgatgtg gcggatgcgc
      241 cgggtcgggc cgcgccttgc ggctcgaccc gtttggcttg ccagtgcggt tctccgcaac
      301 cgataccact gcggacggac ggctgcgcga tgtcgaactt catcgtgaac gcgtggtgct
      361 tcggcgttca gtgcgcggga tgcgcatggc gctcaatatg cccattgccg cctttgacgg
      421 cgtctcgttg tcgctgttgc cccgtgaagg cgctgcggcg gacatcctcg cggtcatgct
      481 taagcacagc gatcctgcgc tgacgctgcc gttgttcctg acgtcgcaac cgcacgaagc
      541 cctggccgaa tggagggcct ggagcgaggt gctcggaatg cctcgcgtgc tcgcgaaaaa
      601 gcattcggct tcagtctcga ttgcgcatct cgggcagttg cacatagaac ggccacgccc
      661 gcggcgtcgc cgtcggagcg cactgaaggc tcgccggccg tctattctcc ttcggcgagg
      721 gtttggcaag attaccgagg cgacgcccgt tcatcgcggc gagcgcgaga tcatcgctcg
      781 aaactaacct ttacaccgct gcagcttcag ggcgccgcct tccatgacca gttcgatatg
      841 gtcgggatcc actttccgca aaatgtaaga cgtgtggccg gcactgatct gtcccgtggt
      901 gaattcgtcg acgatgcgat agctcgatgg accttccgcg gtgaccgagc gattgcggta
      961 gctgggcacg ccattgctgt cggtgcgttg gtttccgata aaatcgatga cccgtttgcc
     1021 gacgcagttg atcgcgcctt tttcagaatt tgtgctttgg ccccatcgac cctggaccgg
     1081 ataggtctgt gccagtgccg gcaaggcaag gaggctgaaa aataatgcag ccgttatggt
     1141 gcgcatggga gaagagtcgc atcagcggcg acaaaaataa agctcggcga ccgcgggtgc
     1201 gtaacgacga gtccccgcta agctgtatta actcttaatc cgctccgtaa ccgcctgccg
     1261 ttggcgtttg aatgatgacg gcctcgtcct tgtcgatgac ggtggcgtcg gaaccctgca
     1321 ggcgttccat acctccatcc atgcgccgca cccaattttc gccgacttgc ccggcctccc
     1381 cgccggcgag cccgaatggc ctgacgcgcc ggtggccgga caaaatggtg cactccatct
     1441 tttcgagaaa acggatcgtg cggcgaatgc cgttgccggc gtgccacttg ccctggcccc
     1501 cggagcccgg gcggatatgg aagtcctcga gtacgacggg ataccggaat tccaggactt
     1561 caggatcggt cagccgcgtg ttggtcatat gcgtatggac cgcatcggtg ccgttgaagc
     1621 ccggacctgc cggcgaaccg gagcagatcg tctcgtaata ttggtagcgt gcgttgccaa
     1681 agttgaggtt gttcatggtg ccttgcgctg cggccagcgc ttcgagcgcg ccgaaaagac
     1741 aattggtcac cgcctgcgag gtctccacgt tcccggcgac gacggcggcg ggaaattccg
     1801 gcgatagcat cgagcgtttg ggaatcacga tattgatcgg ccgcaaacag cctgcattca
     1861 tcggtatctc gtcgtcgacc atgacgcgaa agacgtacag gaccgcggcg cgagtcacgg
     1921 gctccggagc attgaaattg gtcggctgtt gctcgctcgt gccggtgaaa tcgacagttg
     1981 cctcgcgccg cttcttgtcg actgtaatct tcaccttgat cttcgttccc tggtccatct
     2041 cataggtgaa ttcggaatca tgcagacgat cgatcacgcg tcggacactt tcggcggcat
     2101 tgtcctgcac atgctgcata taggctttca caaccggcag cgtgaactgt gaaaccatct
     2161 tgcgcagctc ggcgacgccc ttttcgttgg cggcaatctg cgccttgatg tcgttgatat
     2221 tctgcaccgg gttgcgtgcc gggtatttgg cccccatcaa cgccgccatc agctcttttt
     2281 cccggaagcg gccccggtcg accaatttga agttatcgaa caacacgcct tcctgctcga
     2341 tcgtcgtggc attcggcgac atcgatccgg gcgaaatgcc cccgacgtcc gcgtggtgtc
     2401 cgcgggaagc aacccagaac agaatggttt tctgtcggtc gtcgaatacc ggtgtgcaaa
     2461 cagtgatgtc cgggagatgc gtgccgccat tgtaaggcgc gttaatggcg tagacatcgc
     2521 ctggacggac acgacctgca ttttcacgaa tgatggtttc gaccgcgcgg tccatggagc
     2581 caaggtgaac cggcatgtgc ggggcattgg cgaccagcgt gccgtcatgg gcgaataccg
     2641 cgcaggagaa atcgaggcgc tccttgatgt ttaccgaata ggctgtgttc tgcagcgaga
     2701 cgcccatctg ctcggcgatc gacataaaca ggttattgaa gacttccagc atcaccgggt
     2761 cggcgtgcgt gccgatcgcg tgcacgcgct tgagcttcgt ggcgcgagtc agcaaaaggt
     2821 gattttttgc agtcaattcg gcctgccagc caggctcgac cacgatggtc tggtgcggct
     2881 cgatgatgat agccgcgcct ttgacgcgcg ctccgggttt gagctggtcg cgggtataca
     2941 catttgcctt gtgccacttt ccggcagaaa aaaattgcgt gcgcagcgcc ggcttcggca
     3001 aggtcccacg cgagcggcta accgcctttt cagtaaattt tgcgccgccg ccgaccgctt
     3061 caaccgatac ggcctcgacc accaagtcct tcgcgcggtc gacgaagccg aagcgtgacc
     3121 tgtgggcctt ttcgaacgaa cgcttcatcg cggcggcgct gccggccggc acgacgagcg
     3181 ccgtatcggt acccgcgtag cgtatatgcg cgcgcacgaa tatcctgatc ttgctc
//
LOCUS       DATDHO010000206         3628 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_453726, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000206 DATDHO010000000
VERSION     DATDHO010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3628)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3628)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3628
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453726"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..386)
                     /locus_tag="VIY07_03995"
     CDS             complement(<1..386)
                     /locus_tag="VIY07_03995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEY6380948.1"
                     /translation="MRLPRQFFAPLAIGAPAPLREVPVRLERMIHFIPPHNEKVRAKV
                     RELVQQVDVILGNLEDAIPVDAKEAARKGFIEMARTVAFGSTGLWTRINALNSPWALD
                     DIIEIVGSVGDKLDVVMIPKVDGPWD"
     gene            complement(483..2231)
                     /locus_tag="VIY07_04000"
     CDS             complement(483..2231)
                     /locus_tag="VIY07_04000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY6380949.1"
                     /translation="MSQAAYKSQDLNADPLSCAAWVARFLKARGIDRIFGLQGGHIQP
                     IWDHVARQGIRIIDVRDEGAAVHMAHVHAELTGQFGVAMVTAGPGVTNTVTAIANASL
                     ARAPVLLIGGCTSRPQANMGPLQDIPHVDILRPVTRTSRTARVPEQVVRELDEAVARA
                     LGDAGEPGPVYIEIPTDVLRTRVPPQLVLDEWIQPKATRRLPPDPLAVAEAVDVFWSA
                     KRPLVITGRGAKQAGPALVRLLDVTGALYLDTQESRGLVPVDHPSTAAAVRAAAMTEA
                     DVVLLIGRKLDYQVGYGSPAVFPNARFIRIADNAGELVDNRRGQPELLASPELALDAM
                     VQAAGNRETRIDKAWVDGLRRRHRERMTASQSAKDRPTTGTDGKIHPGAIFDALAAVV
                     PPDYIAIADGGDLLSFARTGMRANTYMDAGAFGCLGVGVPFAIAAALAAPGRMVVSVN
                     GDGAFGINAMEIDTAVRHGAKVVFVVSNNAAWNIERLDQEMNYGGRVVGTTLRHSDYA
                     ALARALGAYGERVESPADLQGALQRALQNAPAVIDVVTSQSVLSSDAQKGLGFVPDYQ
                     ALTIWDEAERKRREAR"
     gene            complement(2251..>3628)
                     /locus_tag="VIY07_04005"
     CDS             complement(2251..>3628)
                     /locus_tag="VIY07_04005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6380950.1"
                     /translation="YNSLEWMEIYAATAIAGLVAVPINFRLVGPEIRYVVENCEAIAL
                     IVQEELLGAIENIRDDLPVPAENFIVFGGTRRQPGYRGYEDLISAASDRPPDVDVAAK
                     DPWTLMYTSGTTGKPKGAIRSHAGSAMLSLVTEMELGLGRSDNALLVMPMCHANSLYF
                     FGAFAYCGAACTIYSRKSFDPEHLVRTLAEGAATFTSLVPTHFIMMLDLPSTVRQRYN
                     VDAVTKLMISSAPARRETKLAIMNYFRNSGLFELYGSTEAGWVTMLHPDEQFSKLGSV
                     GRECVGSRPVRLLNSQGNDVPDGEPGELFSCNSYTFDGYWKMPDKTKEAFRGDYCSVG
                     DLARRDEEGYIFLVDRKNNMIISGGENIYPSEVESLVGAHPKVKDVAVIGIADAKWGE
                     RVHAVIVPRDGETATPEEILDWCKDRIAGYKRPRSVSFIREADMPRTATGKILHRVLR
                     EQHSSASS"
BASE COUNT          703 a         1136 c         1092 g          697 t
ORIGIN      
        1 atatcccatg gcccatccac cttggggatc atgaccacgt cgagcttgtc gccgaccgag
       61 ccaacgatct cgataatgtc gtcgagggcc catggagaat tgagtgcgtt gatgcgcgtc
      121 catagcccgg tcgagccgaa agcaaccgtc ctggccatct cgataaagcc cttgcgcgca
      181 gcctcctttg cgtcgaccgg gatggcgtct tccaggttgc cgagtatcac atccacctgt
      241 tggacaagct cgcgcacctt tgcgcgcact ttttcattgt gcggcggtat gaagtgaatc
      301 atgcgctcca gacgcacggg cacttcgcgc aagggcgcgg gcgcgccgat ggcgagcggt
      361 gcaaaaaact ggcgtggcag tctcatgaaa ttacccgaac gacggctctg cttagagcaa
      421 tgcaaaggcc gcgccaagtg ggccaaattg tgggctggaa actcgacgaa gcttatccgg
      481 acctagcggg cttcgcgccg cttcctttct gcctcatccc atatcgtcaa ggcctggtag
      541 tccggcacaa acccgagccc tttctgtgcg tccgacgaca gcaccgattg tgatgtcacg
      601 acgtctatca ccgcaggggc attttgcagc gcgcgctgga gggcaccctg aaggtccgcc
      661 ggactctcga cgcgttcgcc atatgcgccg agtgcccgcg cgagcgcggc atagtcggag
      721 tgccgcaagg tcgtgccgac gacgcgccct ccatagttca tttcctgatc aaggcgttcg
      781 atgttccatg ccgcgttgtt ggacacgacg aagacaacct tggcgccgtg ccggaccgcg
      841 gtgtcgattt ccatcgcatt gatgccgaat gcaccatcgc cgttgacgga aacgaccatc
      901 cgaccgggcg ctgccagagc ggccgcgatc gcaaacggca cgccgactcc caggcaaccg
      961 aaggcgcctg catccatata ggtgttcgcc cgcatcccgg ttcgtgcgaa gctcaaaaga
     1021 tcgccgccgt ccgcgatcgc aatgtagtcg ggcgggacga ccgccgcgag cgcgtcgaaa
     1081 atcgctcctg gatgtatctt gccgtcggtg ccggtcgtgg ggcgatcttt ggcggactgg
     1141 gaggcggtca tgcgctcgcg atgccggcgg cgcaatccat ccacccacgc tttgtcgatc
     1201 ctcgtctcgc gattgcctgc ggcctgaacc atggcgtcca gggcgagctc cggtgaagcg
     1261 agcaattccg gctggccgcg gcggttgtcg acaagttcgc cggcattgtc agcaatgcga
     1321 atgaagcgcg cgttgggaaa gaccgcgggc gagccgtaac caacctgata gtcaagcttt
     1381 cgtccgatca gcagcacgac atccgcctcc gtcatggctg cggcgcggac tgcagcggca
     1441 gtggacgggt gatccaccgg cacaaggccc cggctttcct gcgtgtccaa atacagcgca
     1501 cctgtcacgt cgagcaggcg tacgagggca gggcccgcct gtttcgcgcc gcgaccggta
     1561 ataaccaggg gtcgcttggc cgaccagaaa acgtcgaccg cttccgccac ggcgagggga
     1621 tccggaggca gacgtcgggt ggccttgggc tgaatccatt cgtcgagcac gagctgcggc
     1681 ggcacccggg tccttagaac atccgttggg atctcgatgt agaccgggcc aggctcaccc
     1741 gcatcaccca atgcacgagc aactgcttca tcgagttcgc gcacgacctg ttcgggaacg
     1801 cgggccgtgc gcgatgtgcg tgtcactggc cgtaaaatgt cgacgtgagg tatgtcctgt
     1861 agtggcccca tgttcgcctg cgggcgggac gtgcagcccc cgatcagcaa caccggagcg
     1921 cgcgcaagcg aagcattggc gatagcggtc acggtgttgg tgacgcctgg tcccgcggtg
     1981 accatcgcga cgccaaactg gccggtcaat tcggcgtgga cgtgcgccat gtgcacagcc
     2041 gcgccttcat cgcggacatc gatgatgcga atgccctgcc gcgcaacgtg atcccagatc
     2101 ggctgaatat gacctccctg caaaccgaaa atacgatcga tgccacgcgc cttcaggaaa
     2161 cgcgcgaccc aggccgcgca cgatagcgga tcggcgttga ggtcctgcga tttgtacgcc
     2221 gcctgactca taatcacact ccctatcagc tcagcttgat gcagaactat gttgctcgcg
     2281 caacacgcgg tggagaatct ttccggtcgc cgtcctcggc atgtctgctt cgcggatgaa
     2341 cgacaccgat cttggacgtt tgtagccggc aatcctgtcc ttgcaccagt cgaggatctc
     2401 ctcgggagtg gccgtctcgc catcgcgagg cacgattacg gcgtgcacgc gttcgcccca
     2461 tttcgcgtcc gctatgccga tcactgccac atccttcacc tttggatggg cgccgaccaa
     2521 cgattcgacc tccgagggat agatgttctc gccgccggaa atgatcatgt tgttcttgcg
     2581 atcgacgaga aaaatgtagc cctcctcatc gcggcgggcg agatcgccta cgctgcaata
     2641 atctccgcga aatgcctcct tcgtcttgtc aggcatcttc caatagccgt cgaaggtgta
     2701 ggagttgcac gaaaagagtt cgcctggctc gccgtccggc acgtcattgc cttgggaatt
     2761 gagcaatcga accgggcgcg agccgacgca ttcccggccg accgatccca gcttggagaa
     2821 ttgttcatcg ggatgaagca tcgtgaccca tccggcttca gttgaaccgt agagctcgaa
     2881 cagccccgaa ttcctgaaat agttcatgat cgccagcttc gtctcacggc gcgccggcgc
     2941 cgatgaaatc atgagctttg tgaccgcgtc cacgttgtac cgctgccgta ccgtcgacgg
     3001 cagatcaagc atcatgatga agtgcgtggg gacgagggaa gtgaacgtcg cggcgccttc
     3061 ggccagcgta cgaaccagat gctcggggtc gaaactcttc cggctgtaga tcgtgcacgc
     3121 ggcgccgcaa tatgcgaacg cgccgaaaaa atagagcgag ttggcgtgac acatcggcat
     3181 gaccagcagc gcgttgtcgc ttcggccgag gccaagttcc atctctgtca cgagggaaag
     3241 catcgcgctg ccggcgtgcg agcggatcgc cccctttggc ttccccgtcg tgccggacgt
     3301 gtacatcaga gtccaaggat ccttcgcagc cacgtcgaca tccggaggcc gatcgctggc
     3361 cgctgagatc agatcctcgt agccgcgata tccgggctgg cggcgagtgc cgccaaacac
     3421 gatgaaattt tcggccggga ccggcagatc gtcgcggata ttttcgatcg cacccaggag
     3481 ttcttcctgg acgataagcg cgatggcttc gcagttttcc acgacgtagc gtatttccgg
     3541 cccgaccagc cggaaattga tcggaaccgc gaccaagccg gcgatcgcgg ttgcggcata
     3601 aatctccatc cattccaggg aattatat
//
LOCUS       DATDHO010000207         7248 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_57783, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000207 DATDHO010000000
VERSION     DATDHO010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7248)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7248)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7248
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_57783"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..719
                     /locus_tag="VIY07_04010"
     CDS             126..719
                     /locus_tag="VIY07_04010"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011316071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6380951.1"
                     /translation="MLLLRIFALVLLVAPVTPAFAQRLMSPTAPTMEDVDPGIDQTAR
                     VRELAPELRRQSVYYRTEQAPGTIIVNTHDRFLYLIMGNGVAMRYGVGVGRDGFQWGG
                     VHNISKKAEWPDWTPPPEMIARQPYLPRWMAGGPGNPLGARALYIGATIYRIHGTNAP
                     QTIGQAVSSGCFRMVNDDVIDLYARVPVGTKVMVQHQ"
     gene            complement(754..1143)
                     /locus_tag="VIY07_04015"
     CDS             complement(754..1143)
                     /locus_tag="VIY07_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF930 domain-containing protein"
                     /protein_id="HEY6380952.1"
                     /translation="MRGFGLALAAVTLVATAAAGADGRFERSLKMLAPTERLEQLCDY
                     TAMTRIREQNKDHRPDRAVANAMAEPVASNDTLEVAGGAFRSKKKWYALSYRCTATPD
                     HLRVIDFRFTIGEEIPEAKWASFGLWE"
     gene            complement(1255..1650)
                     /locus_tag="VIY07_04020"
     CDS             complement(1255..1650)
                     /locus_tag="VIY07_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6380953.1"
                     /translation="MPTFTWDHVHLRTPDPEGMAQWFERMFGAEVIRTMQQDKPRIDI
                     KLGGAMIFTAQVTPGDGVNPPPTTPYQGLDHFGLAVSGIDAIAADLKKKGVEFTQEPH
                     SPRPGIKICFLRGPQGISIELLDRDPKYS"
     gene            1847..2830
                     /locus_tag="VIY07_04025"
     CDS             1847..2830
                     /locus_tag="VIY07_04025"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6380954.1"
                     /translation="MPTHNRRSFLKLSAAILGAPALAGSSFAQAAWPAAKPIRAIVPF
                     SAGSTIDIIGRIVLDPLSRQLGQSIVVENRGGAGGSLGSAAVAKADPDGYTLLINAAA
                     HSGAPAAYPNLPYDAAADFSGVAIFGSVPNVLLVAPSKNIKTLQELVAKAKEGSMSFA
                     SAGAGSATHWAAERFIVSAGLKVTHVPFRGGPEALTEVMTGRVDFVFIGISSGLPFIQ
                     NKQLVPLAVSSAKRSPTLPDLPTTLEAGYKDSDFNYWTGMLVPSKTPRAIVDRLYSET
                     IKALALPEVQQKLAAQGVEPAPMTPSEIDAMIRREIALNLKIAKEAGLKFN"
     gene            3015..3620
                     /locus_tag="VIY07_04030"
     CDS             3015..3620
                     /locus_tag="VIY07_04030"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEY6380955.1"
                     /translation="MAGKTVHAAGGIVVRNGRRPLIAVVQRAKDELWVLPRGKLKSNE
                     SAMAGARREVIEETGHRVRVREFVGAITYRARGRPKVVQFWRMQAEVKPSRDIMKDIM
                     AVEWLPLSAAVRRLSYPLEKLFLSNVGRMTLRQRRLRLRRRARSQVAKAKLPRRGAKT
                     LGHKPRSRRAASRNRTSKVIGHSAARSARATILQRVLGRLS"
     gene            3875..4177
                     /locus_tag="VIY07_04035"
     CDS             3875..4177
                     /locus_tag="VIY07_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380956.1"
                     /translation="MTKTRTLTALAAVATLGLAAVAAPQPAEARRGGAIAAGVIGGLA
                     VGALIGSAAAAPYYGYAPGYYYGGPAYYGGYGGCYWTRQRFWDGWGWRVRRVQVCG"
     gene            4387..4719
                     /locus_tag="VIY07_04040"
     CDS             4387..4719
                     /locus_tag="VIY07_04040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380957.1"
                     /translation="MKKTIFALATATVLAIGTLGATTTADARCYGCAVGAGVAAGVIG
                     GAIIGGAIANSAGAYPAYAPAPGYVVYQGYGAPYPAACPGGYWARRPLRDPYGNFVGW
                     SRPRFICP"
     gene            4783..5100
                     /locus_tag="VIY07_04045"
     CDS             4783..5100
                     /locus_tag="VIY07_04045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380958.1"
                     /translation="MKNTIVAFAAAVTLAAALPSSAQARCSGCGVAAGVVGGLAAGAI
                     VGSAIANSRPVYVEPAPVYVAPPPPPVYVEPEYAEGPVCRSERQRVWDGYAYRTRRVE
                     ICD"
     gene            complement(5113..6354)
                     /locus_tag="VIY07_04050"
     CDS             complement(5113..6354)
                     /locus_tag="VIY07_04050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEY6380959.1"
                     /translation="MTGRIHCAILKLGGLAALLIAVAAWSTQVAKADAAFDRWLQSVW
                     PDAQALGVSRATFDAALRGLEPDYSLTDLAIPGRPEKQPQQPEFVQTPSQYLREASFD
                     RLATRGRQLAAQYRDVLTRIEKELGVPGSIVLAIWARETDYGGYQLPNDAIRVLATQA
                     YVGKRKDFFRNEFLHVLKMLQDGVPRADLRSSWGGAMGLTQFLPSEFYKYAVDFDGDG
                     RADIWRSVPDALASAAKQLAGKGWRAGEPWAIEVRAPANADCSIGVPEMTSPIGEWLK
                     RGFAPAYGRKLTAAELSNDASLLQPEGSYGPSFLTPKNYYVLKDYNFSDLYVLFVGHL
                     SDRIAGGRLFETPWSKNAQLKTSDVEIMQKRLTALGLYKDKIDGKAGMLTRAALGAYQ
                     KKNGLKVDCWPTAAVLEHMRR"
     gene            complement(6391..6969)
                     /locus_tag="VIY07_04055"
     CDS             complement(6391..6969)
                     /locus_tag="VIY07_04055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HEY6380960.1"
                     /translation="MSMTADDAIPPRGFPGLRPLPQLIFSSRWLQLPLYLGLIVAQGV
                     YVVLFMKELWHLVLGAMNFSEQEIMLVVLALIDVVMISNLLIMVIVGGYETFVSRLEL
                     ERHPDQPEWLSHVNASVLKIKLAMAIIGISSIHLLRVFIYAGSLGKPDAPYTETGVMW
                     QALIHGLFVLSAIGIAVVEQVSQSAYAKARPH"
     gene            complement(7062..>7248)
                     /locus_tag="VIY07_04060"
     CDS             complement(7062..>7248)
                     /locus_tag="VIY07_04060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEY6380961.1"
                     /translation="VIISHDRWFLDRIATHILAFEDDSHVEWFEGNFQDYEADKMRRL
                     GTDSIIPHRLKYKKFSR"
BASE COUNT         1436 a         2267 c         2189 g         1356 t
ORIGIN      
        1 atagaatacg aagacgaaaa aggccgctgg cacaccgaaa ccgcacgcgg aaccgaccgg
       61 ccacgaactt acataaaaga caagatctag gtcggcgctg gcgtcatcat catcggggga
      121 tctcaatgct tttgttgcga attttcgctc tcgtgctgct tgttgcgccg gtcacaccgg
      181 ctttcgcgca gcggctcatg tcaccgaccg cgccgacgat ggaagatgtc gatcccggaa
      241 tcgaccagac cgcacgcgtg cgcgagttgg cgcctgaact gcgccggcag tcggtgtact
      301 accgcaccga acaggcgccg ggcacgatta tcgtcaacac gcacgatcgc ttcctctatc
      361 tcatcatggg caacggcgtc gccatgcggt atggcgtcgg cgtcggccgc gatggctttc
      421 agtggggcgg cgtgcacaac atcagcaaaa aggctgagtg gccggactgg acgccgccgc
      481 cggagatgat cgcgcggcaa ccttatcttc cgcgctggat ggccggcggt cccggcaatc
      541 cgctcggcgc gcgggcgttg tatatcggcg cgaccatcta ccgcatccac ggcaccaacg
      601 cgccgcagac gatcggccag gcggtatcgt cgggatgctt ccggatggtc aatgacgacg
      661 ttattgacct ttatgcgcga gtccccgtcg gcaccaaagt catggtgcaa catcaatagt
      721 tcagctcggt cgagatgcgc tgcgctgacc cgctcactcc caaaggccga atgacgccca
      781 tttggcttct ggaatttcct caccgatcgt gaagcgaaaa tcgatcaccc tcaggtgatc
      841 gggtgtcgcc gtgcagcggt aggaaagcgc gtaccatttt ttcttactgc gaaaagcgcc
      901 gccggcaact tctagcgtgt cgttggatgc gaccggttcc gccattgcat tcgccaccgc
      961 gcggtcggga cgatggtcct tattctgttc gcggatgcgc gtcatcgccg tgtagtcgca
     1021 cagctgttcc agccgttcgg tgggcgccag cattttgaga ctacgctcga atcgcccgtc
     1081 ggcgccggca gccgccgttg caacaagcgt cacggcggca agcgccaagc cgaatccacg
     1141 catgcaacct cccgtcagca atacgctcgc cacaatctat gggggagtcg tcaccatagg
     1201 caatccgtgc cgacgcttgt cacagacaaa agtggcatgc ataagccgga tttgtcagga
     1261 atattttggg tcccggtcca gcaattcgat cgagattccc tgtggcccgc gcagaaagca
     1321 gatcttgatt cccggacgcg gggagtgggg ctcctgcgtg aactccacac cctttttctt
     1381 gagatcggcc gcgatggcat cgattcccga gacggcaagg ccgaaatgat cgagaccctg
     1441 gtagggggtt gttggaggag gattgacacc atctcccggc gtgacctggg cagtaaagat
     1501 catcgctccc ccaagcttga tatcgatgcg tggcttgtct tgttgcatcg tgcggatcac
     1561 ctcggcgccg aacatgcgct caaaccattg cgccattccc tccggatccg gagtgcgcag
     1621 gtggacgtga tcccaggtaa aagtcggcat tggcgtttct cccgtggcgg cacggaaaac
     1681 taggcaggac aatcggatcc cgcaaggcga gttcgcggac gcgcggatga aacccacgct
     1741 tgacgccaag tgcaatgcga ctgcacaagg cttttccccc ggccaaagcc gtggcatcat
     1801 gcgccgaaag cctgcagcag acaggcgcgc acattcgggg ggaaacatgc ccacgcacaa
     1861 tcgtcgcagc tttctgaagc tttctgcggc catcctgggt gcaccggcgc tggctggctc
     1921 cagcttcgcg caagcagcct ggccggcagc aaagccgatc cgcgccatcg tcccgttctc
     1981 cgccggcagc acgatcgaca tcattggccg tatcgtgctt gacccgctgt cgcgccagct
     2041 cggtcagagt atcgtggtcg agaaccgggg cggcgccggc ggcagcctgg gctccgcggc
     2101 cgtggccaaa gcggaccccg acggctacac cttgctgatc aatgccgccg cgcattcagg
     2161 cgcgcctgcc gcttatccca atcttcctta cgatgcggcg gccgatttct ccggcgtcgc
     2221 catcttcggc agcgtgccaa acgtgctgct cgtcgcgccc tccaaaaaca tcaagacact
     2281 ccaggagctg gtggcaaaag cgaaagaagg aagcatgagc ttcgcgtcag ccggagctgg
     2341 cagcgccacc cattgggcag ccgagcgctt catcgtcagc gccggcctga aagtgacaca
     2401 tgttccgttc cgaggcggcc cggaggcgct gaccgaggtc atgaccggcc gcgtcgattt
     2461 cgtcttcatc ggcatctcgt ccggtctgcc cttcatccag aacaagcaat tggtgccgct
     2521 tgcggtcagc tcggcgaagc gttccccaac gctgcccgac ctgccgacca ccttggaagc
     2581 ggggtataag gattccgatt tcaactactg gaccggcatg cttgtcccgt cgaaaacacc
     2641 gcgagcgatc gtcgatcggc tttactctga aaccatcaaa gcgctcgcgc tgcctgaagt
     2701 gcagcagaag ctcgccgcgc agggcgtcga gccggcgcca atgacgccga gcgaaatcga
     2761 cgccatgatc cgtcgcgaga tcgcgctaaa cctcaaaatc gcgaaggagg cgggacttaa
     2821 gttcaactga gtcgtcagcg cacccgccaa agatgcagcc gcgagatgat gcggcatgac
     2881 cgcgcagcgc cacgacagaa atgtgacatt ccgacgttat gcaacgttgc ccacaggcgc
     2941 gcacacgcgc acgcatttct ctgcatgctc cgtcgtaatt tttgctaaac gagtccgctc
     3001 acggatcggc gggcatggcg ggcaaaacag ttcatgcagc aggaggcatc gtggtgcgca
     3061 acggcaggcg cccattgatc gcagtcgtgc agcgggcgaa agatgagctt tgggtgctcc
     3121 cgcgcggcaa gctcaagtcc aatgaaagcg cgatggcggg cgcgcggcgc gaggtcatcg
     3181 aggaaaccgg gcatcgagtc cgcgtgcgcg aatttgttgg agcaatcacc taccgcgcgc
     3241 gcggccggcc gaaggtcgtg caattctggc gcatgcaggc cgaagtcaag ccgagccgcg
     3301 acatcatgaa agatatcatg gcggtcgagt ggctgccttt gtccgcggcc gtccgccgcc
     3361 tcagctaccc gcttgaaaaa ctgttcctga gcaacgttgg ccgcatgacg ctgcggcagc
     3421 gaagactccg gctaagacgc cgggcgcgca gccaggttgc caaagccaag ctcccccgcc
     3481 gtggcgcgaa aacgctcggc cacaagccgc gatcgcgccg cgctgcatcg cgcaaccgca
     3541 ccagcaaggt catcggacat tcagcggccc gcagtgcccg ggcgaccatc ctgcaacggg
     3601 tccttggacg cttgtcctag aaggcacgaa acattaacca tacatgccgc cttgccgctt
     3661 cccgccatgc cgtcatgccg ccgcaagcat tgccaaaatt taatcttgcg aaacagcctg
     3721 ttagtgcaat tccaaacagg ccattcacca gctattcacg cgaaaaacgg gaacctcgcc
     3781 tgatagcgat tgttggtgcg ggcgaaaata tgcaggaaac gagcgccagg gccgttgaac
     3841 gcatatcacc cagcgaacca aaggaaggtg cgccatgacc aagaccagaa cactcactgc
     3901 tctcgcggcc gtcgcgaccc ttgggctcgc ggccgtcgcc gccccgcaac ctgctgaagc
     3961 ccgccgcggc ggcgcgatcg cggccggcgt gatcggcggc cttgccgtcg gcgccctcat
     4021 cggctcggct gctgccgctc cgtattacgg gtacgccccc ggctactatt atggcggtcc
     4081 ggcttattac ggcggttacg gcggatgcta ctggacccgc cagcgatttt gggacggatg
     4141 gggctggcgt gtgcgtcgcg ttcaagtgtg tggctaagat ctagtcaaat cgcgtgaagt
     4201 gaagcatgaa gtaagaaaaa gcccgggagt cggcaacgtc tccgggcttt ttcagaagag
     4261 gggctggccg aacgctcaac aaatttccga catattggaa ctgtctcact ctcggcatgg
     4321 ggacaagttt cgcctagact tcatcacgtg gtcggctcag ccgaccgttc tctggagggc
     4381 tactcaatga agaagacgat cttcgcgctc gccaccgcca cggttctggc aattggcaca
     4441 ctgggcgcca cgaccactgc cgacgcccgt tgctatggtt gcgcggtggg tgcaggcgtc
     4501 gcagccggcg tgatcggcgg cgccatcatc ggcggcgcta tcgccaatag cgcaggggct
     4561 tatccggctt atgcgcctgc cccggggtat gtcgtgtatc agggctatgg cgctccttat
     4621 ccggctgcct gccccggcgg ctactgggct cggcggcctc tccgcgatcc ctacggcaat
     4681 ttcgtcggtt ggagccgtcc gcgattcatc tgcccttaaa gatcgcgtaa cgattttggg
     4741 tggatgatcg cgccgaatgg atctcggccc gagaggacac ccatgaaaaa taccattgtt
     4801 gcgttcgccg cggccgtaac cctggccgcg gcgttgccgt cttcggcgca agcacgttgc
     4861 agcggctgtg gagtcgcggc gggcgttgtt ggcggtcttg cagccggcgc catcgtaggc
     4921 tcggcgatag cgaacagcag acccgtctac gtggagcccg caccggttta cgtcgctccg
     4981 ccgccgcctc cagtctacgt ggaaccggaa tatgccgaag gtccggtctg tcgttcggag
     5041 cgccagcggg tatgggacgg ctacgcctac cgcacgcgcc gcgttgagat ttgcgattga
     5101 cgaggcgtgc tgtcagcgcc gcatgtgctc gagcactgcg gccgtaggcc agcaatcgac
     5161 cttcaatccg tttttcttct gatacgcgcc caaggctgca cgcgtaagca tgcccgcttt
     5221 cccgtcgatc ttgtccttgt agaggccaag cgcggtcagc cgcttctgca tgatctcgac
     5281 atcgcttgtc ttgagctggg cgttcttgct ccatggcgtc tcaaatagcc ggccgccggc
     5341 aatgcgatcg ctcaggtgac cgacgaacag cacgtagaga tccgaaaagt tgtagtcctt
     5401 gagcacatag tagttttttg gcgtgaggaa tgagggaccg tagctgcctt ccggctgcag
     5461 gagcgaagcg tcattcgaca gctcggccgc agtgagcttg cggccatagg cgggcgcgaa
     5521 gccacgcttt agccactcgc cgatcggact cgtcatctca ggcacgccaa tgctgcaatc
     5581 ggcattggcc ggcgcccgca cctcgatcgc ccaaggctcc ccggcacgcc agcccttgcc
     5641 ggcgagctgc ttcgccgccg atgccagtgc atccggcacc gagcgccaga tatcggcacg
     5701 cccgtcgcca tcgaagtcga ctgcgtattt gtagaattcg gacggcagga actgcgtgag
     5761 ccccatggcg ccgccccagg acgaacgcag gtccgcgcgc ggcactccgt cctgcagcat
     5821 cttcaagaca tgcaggaatt cgttgcggaa gaaatccttg cgcttgccga cataggcctg
     5881 ggtcgcaagg acgcggatgg catcgttagg aagctggtac ccgccgtaat cggtctcgcg
     5941 tgcccagatc gccagcacga tgctgccggg tacccccaat tccttttcga tgcgagtcag
     6001 aacgtcgcga tactgcgccg cgagttgccg tccgcgggtg gcgagacgat cgaagctcgc
     6061 ttcccgcaaa tattgcgacg gcgtctgcac gaactcaggc tgttgcggct gcttctcagg
     6121 acgtcccggg atggcgagat cggtcagcga atagtccggc tccaggccac ggagggcggc
     6181 gtcgaaagtc gcgcgcgata cgccgagcgc ctgggcatcg ggccatacgg attgaagcca
     6241 gcggtcgaac gccgcatcgg ctttcgcaac ctgcgtggac caggcggcaa cggcaattag
     6301 caacgccgcc aggccgccca gcttcaagat tgcgcaatgg attctgcccg tcatcccccg
     6361 atggcctgtt tgcaaatgat gtgcgccgcg ctaatgcggc cttgctttcg cataagccga
     6421 ctggctcacc tgctcgacca cggcgatccc gatcgcagac aacacgaaga gcccgtggat
     6481 cagcgcctgc cacatcacgc cagtttccgt atatggcgcg tcgggcttgc cgagcgaacc
     6541 cgcatagata aagacgcgca gcaggtggat cgacgagatg ccgatgatcg ccatcgcgag
     6601 cttgatcttc agcacgctgg cattgacgtg cgaaagccac tccggctggt cggggtgtct
     6661 ttccaattcc aatcgggaca cgaatgtttc gtagccacca acaatcacca tgatcagcag
     6721 attggagatc atgacgacgt caatcagggc aaggaccaca agcatgatct cctgctcgct
     6781 gaagttcatg gcgccaagaa caaggtgcca aagctccttc atgaacagca cgacataaac
     6841 gccttgcgcc acaatgagtc cgagatagag cggcaactgc agccagcgcg agctgaagat
     6901 gagttggggg agcggacgca ggcccggaaa gcccctcggg ggaatggcgt cgtcggcagt
     6961 catggacatg ggcggtgacc tcgtatgaat gcgttattgg gcccggaatg agccctcgca
     7021 acagatatgc gattcggaat ggccgaagga tgaccggccg tctatcggct gaacttcttg
     7081 tacttcaatc ggtgcggaat aatggagtct gtgcctaaac gccgcatctt gtcggcctcg
     7141 tagtcctgga agttcccctc gaaccactcc acgtggctgt cgtcttcgaa cgccaggata
     7201 tgtgtggcta tccgatcgag gaaccatcga tcatggctga tgatcacg
//
LOCUS       DATDHO010000208         4392 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_257525, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000208 DATDHO010000000
VERSION     DATDHO010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4392
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257525"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..749)
                     /locus_tag="VIY07_04065"
     CDS             complement(<1..749)
                     /locus_tag="VIY07_04065"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-terminal binding protein"
                     /protein_id="HEY6380962.1"
                     /translation="MAGPAIAVTDTVFPSLDPAKQALAHLNPTYRMSKSVNAEDIVAV
                     AKDADAVLVTYAKLTREVLTQLTRCKAIGRFGLGVDNIDLVTAKEKGIAVNYVPDYCI
                     REVSDHAMALLLALIRKIPLSNKLVQSGRWEMPAVVPIRRIEGTVLGLVGFGHIPRLV
                     APKAQAFGMKVIAYDPFAKPEAFKNAGVERVDFDALLATSDYVSLHAPLLPETRGMMN
                     AAAFAKVKKGAYVVNTARGPLIDEQALVAAL"
     gene            926..1060
                     /locus_tag="VIY07_04070"
     CDS             926..1060
                     /locus_tag="VIY07_04070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380963.1"
                     /translation="MLGRVARSTYVLVLATMIVAWVFSLNKDAPAEPQATQVTWYIHS
                     "
     gene            complement(1128..2036)
                     /locus_tag="VIY07_04075"
     CDS             complement(1128..2036)
                     /locus_tag="VIY07_04075"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY6380964.1"
                     /translation="MRFVGDVQQGQAQSESNNRLPAFAHKQEISFCRSSDNINIAYAT
                     VGNGPVLVKAANWLTHLEYDWESPVWAPLLQRLAERYRLIRYDTRGTGLSDSDVAEFS
                     FDDFARDFDSVVEAVKADRFAILGISQGAAVAVHYAAAHPERVTKLILYGGYAQGRHK
                     RGSADEVEKANLFLSLMQYGWGDEHSAFMRAFSALFIPNGTPEQNKWFADLQRITTTA
                     EKAIRMRMAWNDIDVAHVLPKIRVPTLVLHARHDNVVPLEQGRLLAASIPNARLVTLE
                     SDNHVLLEGEPAWTKFLQEVEGFLGA"
     gene            complement(2010..2312)
                     /locus_tag="VIY07_04080"
                     /pseudo
     CDS             complement(2010..2312)
                     /locus_tag="VIY07_04080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014331219.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
     gene            complement(2602..4164)
                     /locus_tag="VIY07_04085"
     CDS             complement(2602..4164)
                     /locus_tag="VIY07_04085"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     tetratricopeptide repeat protein"
                     /protein_id="HEY6380965.1"
                     /translation="MQIGFEDCLLDTDRRELRRGSELVALEPQVFDVLIYLVENRDRV
                     VSKDDLIASVWSGRIVSESTLTSRINAVRRAIGDTGDKQGLIRTFAKKGFRFIAPVDV
                     KNKDTMAPAEPRAPALGMPTKPSIAVLPFSNMSGEADQDSFVDGVTEEIITALSRLRW
                     FFVIARGSTFAYKSSAIGPEEIARELGVRYILMGSVRRAGDRIRVTAQLIDANNRSNV
                     WARSYDRAASDIFSVQDEITQTIVGGIEPELSRAERERARVRQRDNLDAWSTYQRGMF
                     HLYRYTQDDLAQARKLFEEAIGIDPDLGPAYSALAEAYYYEVVYGFVQPENDRRQRAL
                     ESAQKAVALDRDDAGAHCTLGRIRYLCRDYAAAISELEIALDLNPSLALAHYGLGAAF
                     VFSGRPREAFPHLESAIRLSPHDPNMGSYLVRIAEAKYLIGEDDAAVRFALKALGQPS
                     FQWSRYAVLIAALGQLGRLEEAQRYLAEVTRARPNFSVTFVRTMHPFVRDMGVDRYYE
                     GLRKAGVPEAGS"
     gene            complement(4180..>4392)
                     /locus_tag="VIY07_04090"
     CDS             complement(4180..>4392)
                     /locus_tag="VIY07_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6380966.1"
                     /translation="LAEASAAARRDGRLYTARVVVAWVLTKLGQKSEAQGALAEARRI
                     RPALSLDEIRRFFGERTASDLKPLWG"
BASE COUNT          923 a         1285 c         1294 g          890 t
ORIGIN      
        1 tcgagtgcag cgaccagtgc ctgttcgtcg atgagaggtc cgcgcgccgt gttcacgacg
       61 taagcacctt tcttgacctt ggcgaaagcc gcggcattca tcatgccgcg tgtctccggg
      121 agcaatggtg cgtgcaatga aacatagtcg gaggtagcaa gcagagcgtc gaagtccaca
      181 cgttcaaccc cagcattctt gaacgcttcc ggcttggcga acgggtcgta agcaatcacc
      241 ttcatgccga atgcctgcgc cttgggcgcg accaggcggg ggatgtggcc aaagccgacc
      301 aggccgagaa cggttccttc gatgcgccgg atggggacga ctgccggcat ttcccagcga
      361 ccgctctgca ccagcttgtt ggaaagcggg atttttcgga tcagcgccag caggagagcc
      421 atggcatggt cggacacttc ccggatgcag tagtcgggga cgtagttgac cgcgattccc
      481 ttttccttgg ctgtcaccag gtcaatattg tcaacgccaa gcccgaaacg gccgatggcc
      541 ttgcagcggg tcagttgcgt gaggacctcg cgggtgagtt tcgcgtaggt gacaagaacc
      601 gcatccgcgt ccttcgcgac cgcgacaatg tcctcggcgt tgacgctctt tgacatccgg
      661 taggtcgggt tgaggtgcgc cagcgcctgc ttggccggat cgagcgaggg gaaaacagtg
      721 tcggttacag caattgcagg gccggccatc acaaactccg ggatcattag aagcgggcga
      781 agctacgaca gcagtgcgca tccgtccatc ggctagggct cagccgctca cgatttcaaa
      841 ggcttagcgc attaaccaaa aattaacgac ggacgcgcac cgcggcctcg ttggactatc
      901 ctgataaaaa ggcggaggca gcgggatgct tggcagagtg gctcgaagca cgtacgtgct
      961 cgttctcgcg acgatgatcg tcgcctgggt cttttccctc aacaaggatg ctcccgccga
     1021 gccgcaagcc actcaggtaa cttggtacat tcattcctga cggttcaatt tctgcgcggt
     1081 ctcgtaagca aggacgacgg aactgacgac ggtctgagta tgcgtcgtca cgcgccgagg
     1141 aaaccctcaa cctcctgaag aaatttggtc caggccggct ctccctcgag caatacgtga
     1201 ttgtcgcttt ccagggtcac cagacgcgcg ttcggaattg aggccgcgag caagcgccct
     1261 tgctcgagcg ggacgacgtt atcgtgccgg gcatgcagca ccagcgtcgg tacccgaatt
     1321 ttgggcagca cgtgagcgac atcgatgtca ttccatgcca tgcgcatgcg aatggctttt
     1381 tcggcggtcg ttgtgatgcg ctgcaggtcc gcgaaccatt tattctgttc cggggtgcca
     1441 ttaggaatga acagtgcgct gaacgcgcgc atgaatgccg agtgctcatc gccccagccg
     1501 tattgcatga gagacaaaaa aaggttcgct ttttcgacct catcggccga gccgcgcttg
     1561 tggcggcctt gcgcatagcc accgtagaga atcagctttg tgaccctttc cggatgggct
     1621 gcagcataat ggacggcgac ggctgcgcct tgcgagatgc ccagaatggc aaaccggtct
     1681 gccttgaccg cttcgacaac ggaatcaaaa tctcgcgcga aatcatcgaa ggaaaattcc
     1741 gccacatcgc tatccgacaa accggtccca cgggtatcgt agcggatgag acgatatctc
     1801 tcggcaaggc gctggagcag cggcgcccac accggacttt cccaatcgta ttcgaggtgc
     1861 gtgagccaat tagcggcctt gacgagcaca gggccgttcc cgacggtggc gtatgcgatg
     1921 ttgatgttgt cggaagagcg gcaaaatgaa atctcttgtt tgtgtgcgaa cgccggcaag
     1981 cgattgttcg actcggactg cgcctgacct tgttgcacgt cgccgacgaa gcgcacaccc
     2041 ttgcgcggga tcgtccgtac cagctgctgg ttgccgctgt cgccgattgc ctttcgcacc
     2101 gcattgatgc ggctgtcgag ggttgaatcc gaaacaatcc ggccacccca tacggacgct
     2161 atcagatcgt ccttgctgac gacgcggtcg cgattttgga tgagatagac caggagatcg
     2221 aaaacctgcg gctcgatcgg gacgatcgtg ccacgcgcgc gcaactcccg gcgctccgcg
     2281 tcgagcgcaa aatccttgaa tgaaaacacc acgttgtggc ccgcaattgc gtgaaaccca
     2341 agtatatctc agctctcgag cgccgagaaa tcaatcgcgc ctcaagaaca aatcaatagt
     2401 ttcgcaagga cgacatgcag agccgccggc acgctccagt caaatggagc tcatcgatga
     2461 cgcatgcgtc aaacgaatca agcggacgca gattcttgcg aaggctgctt gatctcatag
     2521 catccgtcag acgttggtcc tccacgcctg cgcggataaa gcggctgcgg atcaatcgat
     2581 ttcactgatg aggcgatgcg ctcaagaacc agcttctgga acaccggcct tgcgaagtcc
     2641 ttcatagtag cgatcgaccc ccatgtcgcg gacgaaggga tgcatggtgc ggacaaatgt
     2701 aaccgagaaa ttcggtctgg ctcgggtcac ctcggcgaga tagcgctgcg cctcttccag
     2761 ccgacctagt tgtcccaatg ctgcgatgag gaccgcatag cgcgaccatt ggaagctggg
     2821 ctgccccaaa gccttgagcg caaaacgcac ggcggcatca tcctctccga tgagatattt
     2881 ggcctcggcg atgcgcacca ggtaggaccc catgttggga tcgtgcggac tgagccggat
     2941 tgccgattcc agatgcggga aggcctctcg cggtctgccc gagaatacga atgcggcacc
     3001 gagaccgtaa tgtgcgagcg ccaggctcgg attaagatcc aatgcaatct ccagttcgga
     3061 gattgcagca gcatagtcgc ggcagagata gcgaattcgt cccagggtgc aatgcgcgcc
     3121 ggcatcgtct cgatcgagag cgacagcctt ctgagcagat tcaagggcgc gttggcgccg
     3181 gtcattctcg ggctgaacaa acccgtagac gacttcgtaa tagtatgcct ctgcgagggc
     3241 cgagtaggcg gggcctagat cgggatcaat gccaatggct tcctcgaaaa gttttcgcgc
     3301 ctgcgccaaa tcgtcttgcg tgtaccgata gagatggaac atgccgcgct ggtaagtgct
     3361 ccatgcgtcc aagttatctc gctgtctgac gcgcgctctt tcccgctccg cccggctcaa
     3421 ttcgggctcg ataccgccga caatcgtctg ggtaatttca tcctgaacgg aaaaaatatc
     3481 cgaggccgcc cggtcgtagc ttcgcgccca aacattgctg cggttattgg cgtcgatgag
     3541 ctgcgcagtg acccggatcc ggtcgccggc gcggcggacg cttcccatga ggatataacg
     3601 aacgccgagt tctcgagcga tttcctccgg gccgattgcg ctgctcttgt atgcgaaagt
     3661 cgaacctcgg gcgatcacga aaaaccaccg aagccgcgac agcgcggtaa tgatttcttc
     3721 cgtgacgccg tcgacgaaag aatcctggtc agcctcgccg ctcatattgc tgaatgggag
     3781 aacggcgatg gacggttttg tcggcatgcc aagcgcaggc gcgcgcggtt cggcgggcgc
     3841 catcgtatct ttgttcttga cgtctacggg ggcgatgaag cggaagcctt tcttggcgaa
     3901 tgtccgaatg aggccttgct tgtcgccggt gtcgccaatg gccctgcgca ccgcatttat
     3961 tcggctggtc agcgtcgatt ctgaaacaat tcggccgctc caaaccgagg cgatgaggtc
     4021 gtccttgctg acgacacggt cacgattttc caccagataa atcagcacat cgaagacctg
     4081 cggttcgaga gcgacaagct cgctgccgcg gcgcaattcg cgccggtcgg tgtccagcag
     4141 gcagtcttcg aatcctattt gcatgacgtt ttattcgcgc tagccccaaa gcggctttaa
     4201 atccgacgca gtgcgttcgc cgaagaagcg tcgtatttca tcgaggctga gagcaggcct
     4261 gatccgccgc gcttcagcca acgctccctg ggcttccgac ttctggccta gctttgtaag
     4321 gacccaagca acaactacac gcgccgtgta gagacgacca tcccgccgcg cggccgccga
     4381 cgcctccgcc ag
//
LOCUS       DATDHO010000209         2203 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_158088, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000209 DATDHO010000000
VERSION     DATDHO010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2203
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158088"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..795
                     /locus_tag="VIY07_04095"
     CDS             136..795
                     /locus_tag="VIY07_04095"
                     /inference="COORDINATES: protein motif:HMM:TIGR03914.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HEY6380967.1"
                     /translation="MAKTRRKPANLPAGDQVIDSPIRTLAELAKAEAECTRCPLYKHA
                     TQVVPGEGRGRSRLMLVGEQPGDQEDKRGKPFLGPAGAILSKALAEAGIERSTVFVTN
                     AVKHFKFESRGKRRLHKRPNAYEIDRCHWWLDIERMLVKPEIIVALGATAIRSISGGP
                     LPINKTRGRVMPLADGGQMLATIHPSYILRIEDDADKRAQYKQFVSDLKVCAKALAKA
                     A"
     gene            complement(797..2005)
                     /locus_tag="VIY07_04100"
     CDS             complement(797..2005)
                     /locus_tag="VIY07_04100"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6380968.1"
                     /translation="MPTNTPGFMRSPPVVPYIYALESAMDELAVKLDMDPIALRRAND
                     SMTDTMGKPWSSRSLMQCYDEAANAFGWSQRDPKPGSMRDGDWLIGWGCASAIYPTHV
                     GAAAARVRLLASGEARVQIAAHEIGTGVRTVVAQMAAERLGIPVSSVTVETGDSTLPP
                     SPVAGGSNQTASCCSVVMKACDHVRRKLYGTTSETVGGSGSGEAAGGGNLEDAFKRLK
                     LGAIEEYAEFLPPGAKPDAIKQLYAGKPSLGGGSHGQKLMYALGAEFVEVRVHARTRE
                     IRVPRIVGAFAAGRLMNTRTARSQYMGGMVWGISSALHEATEIDPRVARYINDNLADY
                     LIPVNADIQQLEVILVPEEDSFVNPAGVKGIGELSNVGTAAAVANAVYHATGVRVRKL
                     PIRLEKLLTA"
BASE COUNT          414 a          680 c          695 g          414 t
ORIGIN      
        1 atgcggatag aaggagggct ctgcttgggg cgtgcctata gcaggccatg cttcggcagg
       61 caataaagat ataaagattt ctttatgtga ctacaatcag gatcgcgccg gcggggcagc
      121 gcgttgtcct tggccatggc gaaaacccgc aggaaaccag cgaacctccc ggccggcgac
      181 caggtgatcg acagtccgat ccggacgctg gcggaactgg ccaaggccga ggccgaatgc
      241 acgcgctgcc cgctctacaa gcatgcaacg caagtcgtgc ccggagaagg tcgcggacga
      301 tctcgcctga tgctggttgg cgaacagccg ggtgaccagg aagataagcg gggaaagcct
      361 tttttaggcc ccgcgggcgc gatcctgagc aaggctttgg ctgaggctgg aatcgagcga
      421 agcacggttt ttgtcaccaa tgcggtcaag cacttcaaat ttgaatcgcg gggcaagcgc
      481 cgtctgcata agcggcctaa tgcgtacgaa atcgatcgct gtcattggtg gctcgatatc
      541 gagcgaatgc tcgtcaagcc ggagatcatt gtggcgctgg gcgcgactgc gatacgcagc
      601 atctcgggcg ggccgcttcc catcaacaag actcgcgggc gcgtgatgcc actcgccgat
      661 ggcggccaga tgctggcaac gatccatccg tcctacattc ttcgtatcga ggatgatgcc
      721 gacaagcgcg cgcaatacaa acagttcgtc agcgacctga aggtttgcgc aaaggctctc
      781 gccaaggccg cctgatctag gccgtcaaca acttctccag ccggatcggc agcttccgca
      841 cgcgcacgcc ggtggcatga tacacggcgt tggcgacagc tgctgccgtg ccgacgttgg
      901 agagctcgcc gatgcccttg acgcccgccg ggttgacgaa actgtcttcc tcggggacga
      961 gaatgacttc cagctgttga atgtcggcat tcaccgggat gaggtagtcc gccaggttgt
     1021 cgttgatgta gcgcgcaacg cgcggatcga tttcggtcgc ttcatgcagc gccgaactga
     1081 tgccccagac catgcctccc atatactggc tgcgcgccgt ccgcgtattc atcagtcgac
     1141 cggcagcgaa ggcgccgaca atgcggggca cgcggatttc gcgtgtccga gcgtgcacgc
     1201 gaacctcgac gaactcggcc cccagcgcat acatgagctt ctggccatgt gagccgccgc
     1261 cgagagaggg cttgccggcg tagagttgct ttatggcatc gggcttggcg ccgggcggca
     1321 gaaactcagc atattcctcg atcgcgccga gcttcagccg tttgaaggcg tcttcgaggt
     1381 tgccgccgcc ggccgcttcg cccgaaccgc tgccgccgac cgtctcgctt gtcgtgccgt
     1441 aaagcttgcg ccgcacatgg tcgcaggcct tcatcacgac cgagcagcag ctcgcggtct
     1501 gatttgaacc gccggcaaca ggcgagggcg gcagcgtgct gtcacccgtt tcgaccgtca
     1561 cgctagaaac tggaatcccg agccgctcgg ccgccatttg tgcgacgacc gtgcgcacgc
     1621 ccgtgccgat ttcatgcgcg gcaatttgca cgcgcgcctc gccgctggcg agcaagcgca
     1681 cgcgggccgc ggcggcgccc acatgggtgg ggtagatggc gcttgcgcag ccccatccga
     1741 tcagccaatc cccgtcgcgc atggagcccg gtttggggtc ccgctgcgac cagccgaagg
     1801 cgttcgccgc ctcgtcatag cattgcatca gtgaacggct cgaccatggc ttgcccatcg
     1861 tgtcggtcat ggaatcgttg gcgcgtcgaa gcgcaatagg gtccatgtcg agcttcaccg
     1921 ccagttcgtc catcgcgctt tccagcgcat aaatgtaggg aacaacaggc ggcgaacgca
     1981 tgaagccggg cgtattggtc ggcatgcact aatgtgacat gcgccttgac cgcgccgtag
     2041 ttgtagagac gcgcgctgtc ttcgacgccg gcgaccgcgt acggatccgg ccgcgaggtg
     2101 acttcttggc cttcgtgcac gaaaccgaca atcttgccat cgcggcttgc gcccatccgg
     2161 atgcgatgcc gtgtttcggc gcggtaagtc tgtatggtaa atc
//
LOCUS       DATDHO010000210        13791 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_108797, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000210 DATDHO010000000
VERSION     DATDHO010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 13791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13791
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_108797"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VIY07_04105"
     CDS             <1..439
                     /locus_tag="VIY07_04105"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6380969.1"
                     /translation="DPFAKPEAFKNAGVERVDIDALLATSDYVSVHAPLLPETRGMMN
                     AAAFAKLKKGAYVVNTARGPLIDEQALVAALESGQVGGAGLDVVAAEPLAKDSPLLGR
                     DNVIISPHTAFYSIEALDELQTKCASDVARVLIGKKAVYPISA"
     gene            469..978
                     /locus_tag="VIY07_04110"
     CDS             469..978
                     /locus_tag="VIY07_04110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY6380970.1"
                     /translation="MLDRTDLEPVFFAPFVSSLMRVEPQWIDYNGHLNMAYYNVLFDR
                     AVDEVYELIGIGADYLKNHRHSTFTAEIHVRYLRELHQGDPVRVTFQLLAFDSKRIHY
                     FEQLFHAAEGWVSATSENMTLHVDMTAKKVKPFPAAIMRSLARMRAAHSQLPRPEAAG
                     RRIAMPKKD"
     gene            complement(1005..1988)
                     /locus_tag="VIY07_04115"
     CDS             complement(1005..1988)
                     /locus_tag="VIY07_04115"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380971.1"
                     /translation="MFASTRIQTILTLAFALLCSLTAAHAQEKVWKHGILEAKSDAGF
                     IAMVDRGGFAAKRGLKVELLQVKAGATLMKALISGEIDSVDMGAAESIVAGIRGTGVK
                     IVGCTWPGVPQVVLAKAEIRTLADLKGKTVAISSPGSLPDLLFRGMLDAANVPFADVK
                     LATQGADLDRYKSLLAGITDAAVVSNEFEAVMPSNIKVLAKGGSAVPKFVRLCVATSS
                     KILAERRDDLVKFVAAEMDAYQYAATHRDATVKIAHEMTNAKPDDTRAEFIYDQALRE
                     KQIDPSLAIPIDRIDWMQELFVKAGVVPKVVPTASLVDASVRDDAEKLAGR"
     gene            complement(2107..3096)
                     /locus_tag="VIY07_04120"
     CDS             complement(2107..3096)
                     /locus_tag="VIY07_04120"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380972.1"
                     /translation="MPRKIPITLACGDNEIVRPLITGKVNVDGVNLTILTDMDSATRH
                     WRFLNMGEFDIAEVSSSSYLAARDNSMPFRAIPVFLHRRFRHGFMFINTSKGIARPAD
                     LRGRRIGVKTMMTTAVLWMRGILQHEYGVPLNSIEWVAEIEDDIKVTLPEDVKYSCLP
                     NEKSVETMLAEGELDAVFHSDFIKPFLARDPRVARLFPDHKTEEIAYFKRTGIFPIMH
                     VLGLRQELTDKYPWLAVNLFKAFNEAKNIAMKRMVNPRIVPLAWYRDAWEEQERVLGP
                     DPWQYGLTDDNRKVLETLVGYSHEQGLIGKRPKLEDLFLSVDQGRKRGGEFRI"
     gene            complement(3119..3670)
                     /locus_tag="VIY07_04125"
     CDS             complement(3119..3670)
                     /locus_tag="VIY07_04125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017404454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEY6380973.1"
                     /translation="MTPPQPSTQSILQHWREAVPDDRLAHLVKDATRALVRALQMRLA
                     RHAVSFGHWTFLRILWEADGITQRELSEQAGVMEPTTFSALKAMERLGYVVRRRRGGD
                     RKKVYVFLTPKGRALRDKLVPLAEEVNRIAVRGVPAADIATTRALLLAIIENLARDEQ
                     GAARRMPSTRELARLKAGNRNRF"
     gene            complement(3667..4845)
                     /locus_tag="VIY07_04130"
     CDS             complement(3667..4845)
                     /locus_tag="VIY07_04130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6380974.1"
                     /translation="MAGASERGLRLGVAGLGRAFSVMLPTFIADPRVTLVAGTDLRSE
                     ARRQFAADFAARSYPTVEELCADPGVEAVYVATPHQHHVRHATLAAQQGKHLLIEKPM
                     ALTLDECRTIVDAARSSSVHIVVGHSHSFDAPIQRMRDLIASGDFGRVRMINAINYTD
                     YLYRPRRPEELDTAQGGGAVFNQAAHQVDIVRLIGGGQVETVRAITGSWDTRRATEGA
                     YAALLTFENGAFASLTYNGYGHFDSDEFQGWIGEMGETKTPYAKSRRRFETADDEIAF
                     KDARNYGGADFKPPCGQAVAHQNFGTLLVSCDRADLRALPNGIMIYQDGSARLDALPQ
                     PTVPRAGVIDELYQAIVNGKAPLHDGVWATATVEVLLAMLRSARQGSDVRLSQQGAIS
                     "
     gene            4938..6251
                     /locus_tag="VIY07_04135"
     CDS             4938..6251
                     /locus_tag="VIY07_04135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEY6380975.1"
                     /translation="MMTAEENDLLCRVEDGAPMGQIMRRHWIAACLSEEVAQPDGAPI
                     KVKLLGEDLVVFRDSKGRVGVLDEYCSHRRASLVFARNEECGLRCLYHGWKFDVDGNV
                     VEMASEPANSLIPERVKHKAYPTREAGGFVWAYMGPPDEMREFEPPAFAPTPDVRVSA
                     TKVRVRCNWAQILEGQIDSAHSSSLHSSDMVPAQVDSAKATEANWLRPSTDKAPRFQI
                     ERTSYGFRYAAIRRPIMNEATHDYIRTTVYIAPFTALIPPNNVHNVATLLTPEDDYNT
                     MFYFIAWNGPDKPGIDVEAWRKFNVLQWGVDVDRNFNGVRTRENLYLQDRGAMKEGNF
                     TGISGIPNQDIAMWESMGPIGDRSRERVGASDVAVVAFRRLMVEAARNMHNGAGAIGT
                     TEPHVTHATISSYEGVVPKTTNWRSLGGGSEAPLQRAGKQPQAAK"
     gene            6278..7231
                     /locus_tag="VIY07_04140"
     CDS             6278..7231
                     /locus_tag="VIY07_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6380976.1"
                     /translation="MRKTTLAGVLAVLTFLTASAASAQDKVKLAIGQRGNWDTSVSEI
                     GQRAGIFKKHGLELEIVYTQGAGETQQAVISGSVDLGIAAGVMGVLSAYSKGAPVRVI
                     GAETTGARDLYWYVKADSPIKSLKDTDDKIIAYSTNGSSTHGIVTAFMKQYQLKAKPT
                     AMGGPAANLTAVMSGQIDVGWAAPPFGLDQLDQKQIRIIASGNDAEVFKGQTVRLNIV
                     NANYLNTHKDVVDRYMKAYRETINYMYTDPNALKIYADWLNISEAKAKRTRDEFFPRA
                     AVEPDKITGLETIVKDAVDLKFTATELTKAQLDDLIRIPAR"
     gene            complement(7261..8859)
                     /locus_tag="VIY07_04145"
     CDS             complement(7261..8859)
                     /locus_tag="VIY07_04145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY6380977.1"
                     /translation="MNTEVIIVGAGPVGLTLAIDLGRRGVRCILLEQKDAPQFLPKME
                     RCNARTMEIYRRMGLAQKIRDAGFPRDAPMDVFIVTSLVEPPLLHLPYPSVAQAQAEI
                     AACTDGSMPLEPYQLISQYTLEPLLKSVAERLPGVDVRYGCEFVSFEQDPAGVRAKMK
                     RDGTGSELSAQFLVGCDGGSSSVRRQLGIKLQGEANLLQLRQALYRCDDLFERIPIGK
                     GRHYHVADDRSTFLIVQDSMRHFTLHSVVDRDDEMKLMFEQAVAMPVKYEMLSCQPWR
                     QNLLLADGYGRGRVFLAGDAVHLMIPTGGLGMNSGVGDAIDLSWKIAATLKGWGGPGL
                     LASYEIERRQVGERNVEASRQASRGRRTWRAAYQPNIRDKTPAGAETRANLSCVADVE
                     QRKSNEMIGAELGYRYAGSPITWPEAGDPPEPDFMKYVPASWPGARLPHVWLADGTAL
                     HDRIGDGYTLLRLSGAQTDSAALARGFASHGAPFTVLDIAEDRPRDIYGHDLLLVRPD
                     LHVVWRGSRMPDDPAKLAAVATGH"
     gene            complement(8992..9789)
                     /locus_tag="VIY07_04150"
     CDS             complement(8992..9789)
                     /locus_tag="VIY07_04150"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6380978.1"
                     /translation="MRLKDKVALVTGGGRGIGRDIVLAYAREGAHVVVNDVDPATADA
                     TAKDAAALGSKSLPVVADVAKSADINRLVETIIKERGRIDIVVNNAMKIVPGKLEALP
                     ETAWDTTMNIGLKGAFLVSQAAAKHMMAQKSGAIVNIASIAGLFPYNWAGSYSVVKAG
                     LIMLTKLQAMEWAPYGIRANAITPGYIRTPGTEAMYADPEIYEGRRKGVPMGRVGSGE
                     DVAGPAIFLASDESRYTTGSVLGADGGQAVGYFLSVPGRRFSGGRID"
     gene            9954..12551
                     /locus_tag="VIY07_04155"
     CDS             9954..12551
                     /locus_tag="VIY07_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEY6380979.1"
                     /translation="MAEPKRNDPAPLNPQPAAGGIAARALGARAAPYLGELNPEQRQA
                     VETLEGPVLVLAGAGTGKTRVLTTRIAHILNLGRAYPSQILAVTFTNKAAREMKERVG
                     QMVGQIVEGMPWLGTFHSIGVKILRRHAELVGLKNNFTILDVDDQIRVIKMILEAEKL
                     DEKRWPARVLAMLIDGWKNRGLMPEQVPSGEAASFANGKGKKLYVAYQERLKTLNAVD
                     FGDLLLENIRLFRQNADVLRSFQDRFKFILVDEYQDTNVAQYLWLKLLAQTNASSTAV
                     IPERREAADPESSDTAEHLDSGFTLAARPGMTEGRQPRNICCVGDDDQSIYGWRGAEV
                     DNILRFEHDFPGAKVIRLERNYRSTGHILAAASHLIAHNEGRLGKTLRTEDELGEKVQ
                     VTGAWDSEEEARAIGEEIEQLQREARERGEDHPLDEIAILVRASFQMREFEDRFIQLG
                     LPYRVIGGPRFYERAEIRDALAYLRVIAQPADDLAFERILNVPKRGLGDATLQMLHDY
                     ARRKRIPLTEAATALSATDEMKPKPRTSLRDLMACFERWREKKDSMPHTELAEIVLDE
                     SGYTDMWQKDRSADAAGRLENLKELVRSMEEFENLQGFLEHIALVMDREAAEAEQAVN
                     IMTLHSAKGLEFDCVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAHVGLTRARKLAK
                     IYFATNRRIRGMWTSTVPSRFLDELPEAHVVVKEAAGGAGGFGMSGYGASRFDEVNAF
                     GSSYTTPGWQRAQARKGRGGFYDNGQPRYVPDGVFDEAGDDDEYAQPEKIRRGSARRD
                     ANRKPLVIEGELVAKSTGTVSSFTVGERVFHQKFGNGNVVAVDGNKLTIAFDKAGEKR
                     VVDSFVEKV"
     gene            complement(12553..12927)
                     /locus_tag="VIY07_04160"
     CDS             complement(12553..12927)
                     /locus_tag="VIY07_04160"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEY6380980.1"
                     /translation="MRSLLLCGRDPYQAGQCIVEAGQLASSLFFLQSGMVSVKLPDGV
                     RLATLAAGMVFGEMGLLEENRSADVWADTSVQCLELPLDEFAAFREKHPQVGERIIRN
                     LAVLLAKRLILANAKIELLTSY"
     gene            complement(13155..>13791)
                     /locus_tag="VIY07_04165"
     CDS             complement(13155..>13791)
                     /locus_tag="VIY07_04165"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF016824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutaminase"
                     /protein_id="HEY6380981.1"
                     /translation="SVLVTARDIAVMAATLANRGRNPLSGEQVISPYAVARTLSVMTS
                     SGMYDSAGEWIYRVGIPAKSGVGGGIIAALPSQLGLGTYSPRLDKHGNSVRGLKVCEA
                     LSAHFDLHLFNRSGNVRNGIIAEYDIGGASSRRNRQPHEQKILDEHHRYCHVYELTGA
                     LSFGVIEYLSRRLVQNRPTSHFVILDFRRVPHHHQGGRAAARRQPGRADES"
BASE COUNT         2776 a         4219 c         4199 g         2597 t
ORIGIN      
        1 cgacccgttt gccaagccgg aagcgttcaa gaatgccggg gttgaacgtg tggacatcga
       61 cgcgctgctt gcgacctccg actatgtttc agtgcacgca ccgttgcttc cggagacacg
      121 cggcatgatg aatgccgcgg ctttcgccaa gctcaagaaa ggtgcttacg tcgtgaatac
      181 ggcgcgcgga cctctcatcg acgaacaggc actggtcgct gcactcgagt ccggacaagt
      241 cggtggcgct ggactcgacg tggtggcggc ggaaccgctt gcgaaggatt cgccgcttct
      301 tggccgcgac aatgtcatca tctctccgca cactgcgttc tactcgatcg aagcgctcga
      361 tgaattgcag acaaaatgcg cgagtgacgt tgcgcgggtg ttgatcggta aaaaggcggt
      421 atacccgatc agcgcatgac catggcaaag cgaacggctg aatgatctat gcttgaccgc
      481 accgatctcg aaccggtctt cttcgccccg tttgtctcgt cgctcatgcg ggtcgagccg
      541 caatggatcg actacaacgg ccatctcaac atggcttact acaacgtgtt gttcgatcgg
      601 gccgtcgatg aagtttacga gctgatcggc atcggcgcgg actatctcaa aaatcacagg
      661 cactcgactt tcaccgccga gatccacgtg cggtacctac gcgagctgca ccaaggcgat
      721 ccggtgcgcg tgacattcca gctgctcgcg tttgattcga agcgcatcca ttatttcgag
      781 caattgtttc atgcggccga aggatgggtt tcagcaacct cggaaaacat gactttgcac
      841 gtagacatga cggcaaagaa agtgaagccg tttcctgctg cgatcatgcg ctcgctggcg
      901 cggatgagag ccgcgcactc gcaattgccg cgtccggaag cggcaggtcg gcgcatcgcg
      961 atgccgaaga aggactaagc gaaaaccgaa cgcagaaggt gcaattatcg tccagcgagt
     1021 ttttccgcat catcgcgcac gctggcatcg acgagcgagg ctgtcggcac gactttcggc
     1081 acgacgccgg ccttgacgaa cagttcctgc atccaatcga tgcggtcaat cgggatagcc
     1141 agcgacggat caatttgctt ttcgcggagc gcctggtcgt agataaattc cgcgcgcgtg
     1201 tcgtcgggct tggcgttggt catttcatga gcgatcttga cagtcgcgtc acgatgcgtg
     1261 gcagcgtatt ggtaggcatc catttccgcc gcgacgaact tgaccaggtc gtcccggcgc
     1321 tctgccagga tcttgctgct ggtcgctacg cacaaacgga cgaattttgg caccgcgctg
     1381 ccgccctttg cgagcacctt gatgttggac ggcatcacgg cttcgaattc attcgatacc
     1441 acggcggcgt cggtgattcc ggcaagcagc gatttgtagc gatcgagatc ggccccctgg
     1501 gtagccagtt tcacatcggc aaagggaacg ttcgcagcgt ccagcatgcc gcgaaacagc
     1561 aggtcgggca gcgatccggg cgaagaaatg gcgactgttt tgcctttgag atcggccagc
     1621 gtcctgattt ccgccttggc cagaacgacc tgcggcacgc ccggccaggt acagccgaca
     1681 attttcactc ccgtgccgcg aatgccggcg acgatcgact ccgccgcgcc catgtcgacg
     1741 ctgtcgatct cgcccgaaat cagcgctttc atcagagtcg cgccggcctt tacctgcaga
     1801 agctcgactt tcagtccgcg cttcgcggcg aagccgcccc tgtcgaccat cgcgatgaaa
     1861 cctgcatcgc tcttggcctc gaggatgcca tgcttccaga ctttttcctg cgcgtgggcg
     1921 gcggtgaggc tgcacagcag cgcgaatgca agcgtcaata ttgtttgtat tcttgtcgac
     1981 gcgaacatga ctcctccagt cgtttgggct ggtcatgacc ggccttggcc gggcatcccc
     2041 ctttgtgacg gcaagtaaag caagacgtgg acggccggga caagcccgcc atgacatcaa
     2101 gcaatcctaa atccgaaatt ccccgccgcg cttgcggccc tgatcgacgc tgaggaacag
     2161 atcctccagc ttcggccgct ttccgatcag gccctgttcg tgcgaatagc caaccagggt
     2221 ttccaggacc tttcggttgt cgtcggtgag cccgtactgc cacggatccg ggccaaggac
     2281 gcgctcctgt tcctcccacg catcgcgata ccaggccagc ggcacgatgc gtgggttcac
     2341 catgcgcttc attgcgatat tttttgcttc gttgaaggcc ttgaagagat ttaccgcgag
     2401 ccatggatac ttgtccgtca gctcctgacg aagcccgagc acatgcatga tcggaaagat
     2461 gccggttcgt ttgaaatagg cgatctcttc ggtcttgtga tccggaaaga gcctcgccac
     2521 gcgcggatcc ctggccagaa atggcttgat gaagtcggaa tgaaaaaccg catcgagttc
     2581 gccttcggcc agcatcgttt cgaccgattt ctcgttcggc aggcaggaat actttacgtc
     2641 ttccggcagc gtgaccttga tgtcgtcttc gatttcagcg acccactcga tgctgttcag
     2701 cggcacgcca tattcatgct gcaggatgcc gcgcatccac aggacggcgg tggtcatcat
     2761 cgtcttgacg ccgatcctgc ggccgcgcag gtcagcgggc cttgcgatgc ccttcgaggt
     2821 gttgatgaac atgaagccat gccgaaaccg gcgatgcagg aaaaccggga tggcccgaaa
     2881 cggcatgctg ttatcgcgcg cggcgagata ggacgagctc gacacctccg cgatatcgaa
     2941 ttcccccatg ttcaggaaac gccaatgccg cgtggctgaa tccatatcgg tcagaatagt
     3001 cagattgacg ccgtcgacat tgaccttgcc ggttatcaag gggcgcacga tctcgttgtc
     3061 gccgcacgca agcgttatgg gaatttttct cggcatgcga acggttcaaa tccttcattc
     3121 aaaatcgatt gcgatttccc gctttcagtc gcgccaattc gcgggttgac ggcatgcgcc
     3181 tggcggcacc ctgctcgtcc cgcgccagat tttcgatgat tgcgagcaga agtgcacgcg
     3241 tcgtcgcaat gtcagcggcg ggcacgccgc gcaccgcgat gcgattgacc tcctcggcga
     3301 gcggcaccag cttgtctcgc agcgcccggc ccttcggcgt aagaaagacg tatactttct
     3361 tgcggtcccc gccgcgccgg cggcgcacga cgtagccgag ccgctccatc gccttcaatg
     3421 ccgagaatgt cgtgggctcc atgaccccgg cttgctcgct cagttcgcgc tgggtaatcc
     3481 cgtcggcttc ccagaggatg cgcaggaatg tccaatgccc gaacgaaacg gcgtgcctgg
     3541 caagccgcat ctgcaatgcg cgcaccagcg cgcgtgttgc gtccttgacc agatgcgcga
     3601 gccggtcgtc cggtacggct tcccgccaat gctggaggat cgattgggtg ctgggctgtg
     3661 gaggcgtcat gatatggcgc cctgttgact gaggcgcaca tctgagcctt gacgtgctga
     3721 acgcagcatt gccagcagca cttccaccgt cgcggtcgcc cagacgccgt catgaagggg
     3781 cgctttgccg ttcacgatgg cctgatagag ctcatcgata actccggcgc gcggcaccgt
     3841 gggctgaggc agcgcatcga gccgggcgga gccatcctga taaatcatga tgccgttcgg
     3901 cagcgcgcgc agatccgcgc ggtcgcaact caccagcaac gttccaaaat tctgatgtgc
     3961 aacggcttgg ccgcatggag gtttgaaatc ggcaccgcca taattgcgcg catccttgaa
     4021 agcgatttca tcgtcggcgg tctcgaagcg acgccgagac ttcgcatagg gagtcttcgt
     4081 ttcgcccatc tctccaatcc agccctgaaa ttcatcggaa tcgaaatggc cgtaaccatt
     4141 gtaggtgagc gaggcgaacg cgccgttctc gaacgtaagc agcgcggcgt aggcgccctc
     4201 ggttgcgcgc cgtgtgtccc atgaaccggt gatcgcgcgc accgtttcga cttggccgcc
     4261 accgatcagg cgtacgatat cgacctgatg tgccgcctga ttgaacaccg cgccgccgcc
     4321 ctgggccgtg tcgagttctt ccgggcgacg cggtcggtaa agatagtccg tgtagttgat
     4381 ggcgttgatc atgcggacgc ggccaaagtc gccactcgct atgagatcgc gcattctctg
     4441 aatgggcgca tcgaaggagt gactatggcc gacaacaatg tgcacgctgg agctccgcgc
     4501 ggcatccacg attgtgcggc actcatcgag cgtgagggcc attggctttt cgatcaggag
     4561 gtgtttgcct tgttgggccg caagcgtggc gtgccgtacg tggtgctggt gcggggtcgc
     4621 cacataaacc gcctcgacac caggatcagc gcacaactcc tcgacggtcg ggtagctcct
     4681 ggcggcaaag tccgcggcaa actgacgccg cgcttccgat cggagatcgg ttcccgccac
     4741 cagcgtgacc cgtgggtcgg caataaaggt cggcagcatc acgctaaatg cgcggccgag
     4801 accggccaca ccgagacgga gcccacgttc gcttgcgccg gccatcgaca aggtccctca
     4861 cctggcttta tcttagatat ctaagaaagg acgcgcgaga aaaatctgaa ggtcgcgccc
     4921 gacgaggaga cgccgccatg atgaccgccg aagaaaatga tctgctgtgc cgagtcgagg
     4981 acggtgcgcc gatgggccag atcatgcggc gccactggat tgcggcctgc ctgtcggaag
     5041 aagtcgcgca acctgatggc gcgccgatca aggtcaaact tctcggcgag gatcttgtcg
     5101 tattccgcga cagcaagggc cgcgtcgggg tgctcgacga atattgctcg caccggcgcg
     5161 catcccttgt tttcgcgcgc aacgaggaat gcgggctgcg ctgcctctac cacggctgga
     5221 agtttgatgt ggacggcaac gtggtcgaga tggcatccga accggccaac agcctcattc
     5281 cggagcgggt caagcacaag gcctatccca cgcgcgaagc aggcggcttt gtctgggcct
     5341 acatgggtcc tccggacgag atgcgtgaat tcgagcctcc ggcattcgcg cccacccccg
     5401 atgtacgcgt cagcgcgacc aaagtgcggg tgcgctgcaa ctgggcgcag attcttgaag
     5461 ggcagattga ttcagcgcat tcttccagcc tgcattcgtc cgacatggtg ccggcgcagg
     5521 tcgatagcgc aaaggcaacg gaggcaaact ggctgcgccc gtcgaccgac aaggcgccgc
     5581 gcttccagat cgagcgcacc agctacgggt tccgttatgc ggcgatccgt cgcccgatca
     5641 tgaacgaagc gacccacgac tacatccgca ccactgtcta cattgcgcct ttcaccgcac
     5701 tgatcccgcc caacaacgtg cacaatgtcg cgacgctgct gaccccggaa gacgactaca
     5761 acacgatgtt ttatttcatc gcctggaacg gtccggacaa accaggcatc gatgtcgagg
     5821 cgtggcgcaa gttcaacgtg ctgcaatggg gcgtcgacgt cgaccgcaat ttcaacggcg
     5881 tgcgcacgcg ggagaatctc tatctccagg atcgcggcgc gatgaaagag ggcaatttca
     5941 ccggcatcag cggcataccg aaccaggaca tcgccatgtg ggagtcgatg ggcccgatcg
     6001 gcgaccgttc cagggagcgc gtcggcgcca gtgacgtggc cgtagtcgcg ttccgtcgac
     6061 tcatggtcga agcggctcgt aatatgcaca atggcgccgg tgcgatcggg accacggaac
     6121 cgcacgtgac gcacgcaacc atcagctcat atgaaggggt cgttccgaag acgacgaact
     6181 ggcgcagcct cggtgggggc agcgaagccc cgctccagcg cgccggcaaa caaccacaag
     6241 ccgccaaata gacggcaaat tccagggagg attcacgatg aggaaaacca cgctcgccgg
     6301 cgtattggcg gtcttgacgt tccttacagc ttcggccgca tcagctcagg acaaggtgaa
     6361 acttgcgatc gggcaacgcg gcaattggga cacctcggtg tcggaaatcg gccagcgggc
     6421 cggaatcttc aagaagcacg gccttgaact cgagatcgta tacacccaag gggccggcga
     6481 aacgcagcag gcggtcattt ccggcagtgt ggacctcggc atcgcggccg gcgtcatggg
     6541 cgttctcagc gcctattcga aaggtgcgcc cgtgcgcgtc atcggtgcgg aaacgaccgg
     6601 cgccagggac ctttattggt acgtgaaggc ggattccccg atcaaatcgc tgaaggacac
     6661 cgacgacaag atcatcgcct actcgaccaa cggatcctcg acccacggca tcgtcaccgc
     6721 cttcatgaaa caataccagc tcaaggccaa gccgaccgcg atgggaggtc cggctgcaaa
     6781 cctgacggca gtgatgtctg ggcagatcga cgtcggctgg gcagccccgc cgttcggact
     6841 tgatcagctt gatcagaaac agattcgaat tattgcgagc ggcaacgacg ccgaagtctt
     6901 caagggccaa acggtgcggc ttaacatcgt caatgccaat tatctgaata ctcacaaaga
     6961 tgtggtcgac cgctacatga aagcctatcg cgagacgatc aactacatgt acaccgatcc
     7021 gaacgctttg aagatttatg cggactggct caacatcagc gaggcgaaag ccaagcgtac
     7081 gcgcgacgag ttttttccgc gcgcggccgt tgagccggac aagatcacag ggctcgagac
     7141 gatcgtgaag gacgcggtcg acttgaagtt caccgcaacg gaactcacga aggcccaact
     7201 cgacgatctg atccggattc cggcgcgctg acgaaattgg taaccaaatg gacgaacggc
     7261 ctagtgtcca gtagctactg cggccaattt ggccggatca tccggcatcc ggctgccgcg
     7321 ccagacaacg tgcaaatctg gccttaccag cagcaggtcg tgaccataaa tgtcgcgcgg
     7381 gcggtcctcg gcgatgtcga ggaccgtgaa tggcgcgcca tgtgaggcaa agccccgagc
     7441 aagcgccgcg ctatcggttt gcgcacctga taggcgcaac agggtgtagc cgtcgccgat
     7501 acggtcgtgc agcgccgtcc catcggccag ccacacatgc ggcaggcggg cgcccggcca
     7561 gcttgccggc acatatttca tgaaatcggg ttcgggcgga tcgccggctt cgggccaggt
     7621 gatcggcgaa ccggcatacc ggtagccaag ctcggccccg atcatctcgt tactcttgcg
     7681 ctgctcgaca tcggcgacgc acgagagatt cgcgcgcgtc tcggcacctg cgggcgtctt
     7741 gtcgcgaatg ttcggctgat aggcggcacg ccaggtgcgg cggccgcgcg aagcttggcg
     7801 cgaggcctcg acgttgcgct cccccacctg acgccgctcg atctcataag atgcgagaag
     7861 acctggtccg ccccaccctt tcagcgtcgc cgcaatcttc caggacagat cgatggcatc
     7921 gcccacgccg ctgttcatcc cgagtccgcc ggtcgggatc atcagatgca ctgcgtcgcc
     7981 ggcgagaaat acccggccgc ggccgtagcc atcggccagc agcagatttt gccgccacgg
     8041 ctggcaagag agcatctcgt atttcaccgg catggcgacg gcttgctcga acatgagctt
     8101 catctcgtcg tcgcggtcca ccaccgaatg cagcgtgaaa tgacgcatgg aatcctgcac
     8161 aatcaaaaaa gtcgagcgat cgtcagcaac gtgatagtgc cgccctttcc cgatcggaat
     8221 gcgctcgaac agatcgtcgc aacgataaag cgcctgtcgc agctgcaaca agttcgcctc
     8281 gccttgaagc ttgatgccga gctggcgccg cacgctgctc gatccgccgt cacagccgac
     8341 gagaaattgc gcgctcagtt ccgatcccgt gccgtcgcgc ttcatcttcg cgcgcacgcc
     8401 ggcgggatcc tgttcgaacg agacgaattc gcacccgtag cgaacgtcga cgcccggcag
     8461 gcgctctgcc actgatttga gcagcggctc gagcgtatat tgcgaaatga gctgatacgg
     8521 ttcgagcggc atcgatccgt cggtgcacgc ggcgatttct gcctgtgcct gcgcaaccga
     8581 agggtacggc aggtgaagaa gcggcggctc gaccagcgag gtgacgatga acacgtccat
     8641 gggtgcatcg cgcggaaaac cggcatcgcg gattttttgt gccagcccca tgcggcgata
     8701 aatttccatc gtccgggcgt tgcaacgctc catctttgga agaaattgcg gcgcatcttt
     8761 ctgctcaagc aggatgcagc gcacgccgcg gcgaccgaga tcgatggcaa gggtcagtcc
     8821 gacggggccg gcaccgacga tgatgacttc ggtgttcacg cgacaattcc cagagtgggc
     8881 cgattgaatc tgcgttttca catagtcatg gccgggctcg tcccggccat ccacgtcttg
     8941 atttccgaaa gacgtcatgc ccgcgacaag cgcgggcatg acgacccaca atcaatcgat
     9001 cctcccgccg gagaagcgtc gtcccggcac gctgagaaaa taaccgactg cctggccgcc
     9061 gtcggcgccg agaacgcttc cggttgtgta gcgggattcg tcggatgcca ggaagatcgc
     9121 gggaccggcg acatcctcgc cggacccgac ccggcccatc ggcacgccct tgcgcctgcc
     9181 ttcgtagatt tccggatcgg cgtacatcgc ctcggtgcca ggcgtccgga tatagccggg
     9241 cgtgattgca ttggcgcgaa tgccgtaagg cgcccactcc attgcctgca atttggtcag
     9301 catgatcaga cccgccttca ccacgctgta ggaaccggcc cagttgtagg gaaaaaggcc
     9361 ggcgatcgaa gcaatattga cgatggcgcc ggatttctgc gccatcatgt gtttcgcagc
     9421 cgcctggctc acgaggaacg cgcccttcaa gccgatattc atcgtcgtgt cccaggccgt
     9481 ttccggcagt gcttccagtt ttccgggaac gatcttcatc gcattattga cgacaatatc
     9541 gatgcgtccg cgctccttga tgatggtttc gacaagccgg ttgatgtcgg cggacttggc
     9601 aacgtcggcg accaccggaa ggctcttgct gccgagtgcc gctgcgtctt tcgccgttgc
     9661 gtccgcggtc gcgggatcga catcgttgac gacgacatgg gcgccttcgc gcgcataggc
     9721 cagtacgata tcgcggccga tgccgcggcc cccgccggta accagcgcca ccttgtcttt
     9781 cagtcgcacg gaactccccc ttacgctgca tgaattgcat tggaaaaacg acgctaaagc
     9841 cggcatacga tgccgacaag ggcgcttcgg cctcgaaaat ggcacctatg agtgccatct
     9901 ttgctattga aagaatcatt ccagcggccg tgtgagccgc cctatcggac aacatggccg
     9961 agccgaaacg taacgaccct gctccattga acccgcagcc cgccgcgggc ggcattgccg
    10021 cgcgcgctct cggggcgcga gccgcgcctt atcttggcga actcaatccg gagcagagac
    10081 aggcggtgga gacgctggag gggccggtgc tggtgcttgc cggcgccgga accggaaaaa
    10141 cccgcgtgct caccacgcgc atcgcgcaca ttttaaatct tggccgcgca tacccgagcc
    10201 agatcctcgc cgtcaccttc accaacaagg cggcacgcga gatgaaagaa cgcgtcggcc
    10261 agatggtcgg acagatcgtc gagggcatgc cgtggctcgg gaccttccac tcgatagggg
    10321 tgaaaattct caggcgccac gccgaactgg tcgggctgaa gaacaatttc acgatcctcg
    10381 atgtcgacga ccagatccgc gtgatcaaga tgatcctgga agccgagaag ctcgatgaaa
    10441 agcgctggcc ggcgcgggtg cttgccatgc tgatcgacgg ctggaagaac cgcggtctca
    10501 tgccggaaca ggtcccgtcc ggcgaagctg cgagcttcgc caacggcaag ggcaagaagc
    10561 tttacgttgc ctatcaggag cggctgaaga cgctcaacgc ggtcgacttc ggcgatctgc
    10621 tgctcgagaa catccggctg tttcgtcaga acgcggatgt gctccgctca ttccaggatc
    10681 gattcaagtt cattctggtc gacgaatatc aggacacgaa cgtcgcgcag tatctgtggc
    10741 tgaagttgct ggcgcagacg aacgcaagct ccactgccgt cattccggaa cgccgcgaag
    10801 cggcggatcc ggaatccagc gatacggcag agcatctgga ttccgggttc acgcttgcag
    10861 cgcgccccgg aatgacagaa gggagacagc ccagaaacat ctgctgcgtg ggcgacgacg
    10921 accagtcgat ctatggttgg cgcggcgcgg aagtcgacaa catcctgcgc ttcgagcacg
    10981 atttccccgg tgccaaggtc atccggctcg aacgaaatta tcgctccacg ggtcatatcc
    11041 tggcggccgc ttcccatctc atcgcccaca atgaaggtcg tctgggcaag acgctgcgca
    11101 ccgaggatga gctcggcgag aaggtgcagg tcaccggcgc ctgggacagc gaggaggaag
    11161 cgcgcgcgat cggcgaggag atcgagcagc tccagcgcga ggcgcgcgaa cgcggcgagg
    11221 accacccgct cgacgagatt gcgatccttg tccgcgcctc gttccagatg cgcgaattcg
    11281 aagatcgatt catccaactc ggcctcccct atcgcgtgat cggcggtccg cgcttctacg
    11341 agcgcgccga aatccgcgac gccctcgcct atctgcgcgt gatcgcgcag ccggccgacg
    11401 acctcgcctt cgagcgcatc ctcaacgtgc caaagcgcgg cctcggcgac gccacgctgc
    11461 agatgctgca cgactacgcg cgcaggaaac gcattccgtt gaccgaagca gcgacagcgc
    11521 tttctgcgac cgacgagatg aagccaaagc cgcgcacgtc gttgcgcgat ctgatggcgt
    11581 gctttgagcg ctggcgcgag aagaaagatt caatgccgca caccgagctc gccgaaatcg
    11641 tgctggatga atcgggctac acggacatgt ggcaaaagga tcgctcggcc gatgccgcag
    11701 gccggctgga gaacctcaag gagcttgtgc gctccatgga ggaattcgag aacctgcagg
    11761 gtttcctcga gcacatcgcc ctggtgatgg accgcgaggc ggccgaggcc gagcaggccg
    11821 tcaatatcat gacgcttcat tcggcgaagg ggctggaatt cgactgcgtc ttcctgcccg
    11881 gctgggagga aggcctcttt ccgcatcagc gctcgctcga cgagagtggc cgcgccggcc
    11941 tcgaggaaga gcgccgcctt gcccacgtcg gcctgacccg cgcgcgcaag cttgcgaaga
    12001 tctacttcgc taccaatcgg cgcatccgcg gcatgtggac ctcgaccgtg ccatcgcgct
    12061 ttctcgatga attgccggag gcgcatgtgg tggtgaaaga ggcggcaggc ggcgcgggtg
    12121 gctttggcat gtcgggctac ggcgcctcgc gcttcgatga ggtgaatgcc ttcggctcga
    12181 gctacacgac gcccgggtgg cagcgcgcgc aggcacgcaa gggtcgcgga ggattctacg
    12241 ataatggcca gccgcgttat gtgccggacg gcgtgtttga tgaggccggc gatgacgatg
    12301 aatacgccca acctgagaag atccgccggg gcagcgccag gcgtgatgcc aatcgcaagc
    12361 cgctcgtgat cgaaggcgag ctggtggcga aatcgacggg cacggtttca tcgttcacgg
    12421 tcggcgagcg cgtctttcat cagaaattcg gcaacggcaa cgtggtggcc gtggacggca
    12481 acaagctcac cattgcgttc gacaaggccg gcgaaaagcg cgtggtggat agttttgtcg
    12541 agaaggtgtg aatcaatacg aggtcagtag ttcgatcttc gcattggcca ggatcagacg
    12601 ctttgcgagc aggacggcca ggttgcggat gatgcgctcg ccgacctgag ggtgtttttc
    12661 gcgaaaagcg gcgaactcat ccagcggaag ttcaaggcac tgtactgatg tatcggccca
    12721 gacatcggcc gaccggtttt cctccaggag gcccatctcg ccgaagacca tgcccgcggc
    12781 aagcgtcgca agccgcacgc catccggcag tttgacgctg accatgccgc tctgcaggaa
    12841 gaacaaggac gaggcgagtt gtcctgcctc cacgatgcat tgcccggcct gatagggatc
    12901 gcggccgcat aagagcagcg agcgcatcaa tctcgcggtc ggccagcccg gcgagcagag
    12961 cctgctcgcg cagcgttgtg gggtcgttca ggtgctcgta cccgccatag cgatagatga
    13021 tctggtcctc ggcccactcg atcgcttcat cgagcatggc gaacttgcgc aatttcgaaa
    13081 gcgattcgat cagcggaccg attgtcacag caattgaaga ctgtgactgt atgcctgaca
    13141 aaaccaccgt cgtttcagct ttcgtcagcc cgcccaggct gtcggcgagc agccgcgcgg
    13201 ccgccttggt gatggtgggg gaccctacgg aagtcgagaa tgacgaagtg ggaggttggc
    13261 cgattctgta cgaggcgccg cgagagatat tcgatcacgc cgaagctcag cgccccggtc
    13321 agctcataga cgtggcagta tctgtgatgc tcatcgagaa ttttctgctc gtgcggctgg
    13381 cgattgcggc gcgacgacgc gccgccgata tcgtattcgg cgatgatgcc atttctcacg
    13441 ttgccgctgc ggttgaacag gtgcaggtcg aaatgcgctg acagcgcctc gcagaccttc
    13501 agcccgcgca cgctgttgcc gtgcttgtcg agacgcggcg agtaagtgcc aagcccaagc
    13561 tgcgacggca gcgcggcaat aattccaccg cccaccccac tcttcgccgg tatgccgacc
    13621 ctgtaaatcc attcgccggc ggaatcgtac atccccgagc tcgtcatcac ggacagtgtg
    13681 cgcgcgacgg cgtaggggct gatgacctgc tcgccgctga gcgggtttcg gccgcgattg
    13741 gcgagcgttg ctgccattac ggcaatgtcg cgcgcggtca caaggaccga a
//
LOCUS       DATDHO010000211         3088 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_406132, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000211 DATDHO010000000
VERSION     DATDHO010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406132"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(56..1426)
                     /locus_tag="VIY07_04170"
     CDS             complement(56..1426)
                     /locus_tag="VIY07_04170"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEY6380982.1"
                     /translation="MARDQIDMTPIETRDELVAWLEAGCKPKGQFRVGTEHEKFAFTV
                     ADHRPVPYSTRRSIRALLEGMHGLLGWEPIMEGDNIIGLFDVTGGGAISLEPGGQFEL
                     SGAAYDNVHQTAAELMAHLAQVREVAKPLGIGFLGIGMTPNWTRADMPKMPKGRYKIM
                     TAYMPKVGSLGLDMMYRTCTVQANLDFASEADMVKKLRVSLALQPVATALFANSPFTE
                     GKPNGFLSFRSEIWRHTDNQRAGMLPWAFEGGMGFERWTDYALDVPMYFIKRGDKYID
                     VSGKSFRDFLNGKLAELPGERPTISDWANHLSTIFPEVRLKRYLEMRGADGGPWRRLP
                     SLSAYWVGLLYDDDALNSCWDTVKSWTAEERQKLRDDVPRLGFRAEIRNRNVLTLAQE
                     TLRLCSRGLARRKRLDRNGRDETRYLRPLEESIARGMTPAEELLERYHGEWGGSVDPI
                     FEEYAY"
     gene            1645..2766
                     /locus_tag="VIY07_04175"
     CDS             1645..2766
                     /locus_tag="VIY07_04175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY6380983.1"
                     /translation="MTHFTPHQEKALKAVGDWLRAKPGANGTPQVFRLFGYAGTGKTT
                     LARHIADAADGEVKFAAFTGKAASVMRGKGCRGASTIHGLIYRARESGEEIPSFDLWD
                     EAPASKAELIIIDECSMVDAELGRDLLSFGVPVLVLGDPAQLPPIQGGGFFTEAEADA
                     MLTEVHRQAQDDPIVRLSMDIRAGEYIEPGRYGETEILRKNDLDPERVLEADQVLVGR
                     NVTRRAYNARMRERRGFTDEMPSAGDKLVCLRNNRKKGLFNGGLWTVKERSGRKGSAK
                     AGILTMRLLPDDDTARRGIKVSVRPECFSGGIEQVDWPRRKPYDEFDYGYVLTVHKAQ
                     GSQWNDVVLFDESFAFPDSGARWLYTGVTRAAKKLTLVV"
     gene            complement(2818..>3088)
                     /locus_tag="VIY07_04180"
     CDS             complement(2818..>3088)
                     /locus_tag="VIY07_04180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6380984.1"
                     /translation="IMVGVALWGLHMGLTQGLLAALVADTAPAELRGTAFGMFNLVSG
                     VALLAASILAGALWDQVGPSGTFLAGALITAIALASLSLARKRVF"
BASE COUNT          640 a          939 c          909 g          600 t
ORIGIN      
        1 ggaccagatt tcgctggttt cacgtcatgc tgcattcccg cttacgcggg agttgctaat
       61 atgcatattc ctcgaaaatc ggatcgaccg agccgcccca ttcgccatgg taacgctcga
      121 gcaattcttc cgccggcgtc atgccgcgcg caatcgattc ttccaggggt cgcaggtagc
      181 gcgtttcatc ccggccattg cgatcaagcc gcttgcggcg cgccaagccg cgggagcaga
      241 gcctcaacgt ttcttgcgcg agcgtgagga cattgcgatt gcggatttcg gccctaaaac
      301 caagccttgg cacatcgtcg cggagttttt gccgctcctc tgcggtccac gatttcaccg
      361 tgtcccaaca tgaattgagc gcatcgtcat cgtaaagcag cccgacccaa tacgcgctca
      421 gtgagggcaa ccgccgccac gggccgccgt cggcaccgcg catctcgaga taacgcttaa
      481 gtcggacctc gggaaaaatc gtgctgaggt gattggccca atcggaaatc gtcggccgct
      541 cccccggcag ttccgccagc ttgccgttca ggaaatcgcg gaacgacttg ccggaaacat
      601 caatgtattt gtcgccgcgc ttgatgaaat acatcggcac gtcgagcgca taatcggtcc
      661 agcgctcgaa acccattccg ccctcgaaag cccacggcaa catgccggca cgctgattgt
      721 cggtgtgacg ccagatttcg gagcggaatg aaagaaatcc gttcggcttc ccctcggtga
      781 acggtgaatt ggcgaacagc gcggtcgcca ccggctgcaa ggcgagcgac acgcgcaact
      841 tcttcaccat gtcagcctca ctggcgaaat ccaaattcgc ctgcaccgtg caggtgcgat
      901 acatcatgtc gaggccaagt gaaccgactt taggcatata ggccgtcatg atcttgtacc
      961 ggcccttcgg cattttcggc atgtcggcgc gtgtccagtt cggcgtcatg ccgatgccga
     1021 gaaagcctat gcccaaaggc ttggcgactt ccctcacctg cgccaggtgc gccatgagtt
     1081 ccgcggccgt ctggtggaca ttgtcatagg ctgcgcccga taattcgaac tgcccgccgg
     1141 gctccagcga gattgctccc ccgccggtca catcaaacag gcctataata ttgtcgccct
     1201 ccatgatcgg ctcccagccg agcaaaccat gcatgccttc aaggagggca cggatgctgc
     1261 gcctggtcga ataaggaacg ggccggtggt cggcgaccgt gaaagcaaat ttttcgtgct
     1321 cggtgccgac gcggaattgg cctttcggct tgcagcccgc ttcgagccag gcgacaagtt
     1381 cgtcgcgagt ctcgattgga gtcatgtcta tctggtcacg ggccatgcga aatccgtcgc
     1441 cgcaaagggc cgcgacgtta agcatgctgc actgcaaagg gcaatgcgcc tcacatcgga
     1501 tatctgggcg atgctaagcc gcggatctct tctcgcggcg gacagcgctg cggctatagg
     1561 aatatgttct tataaaatca ttttcaggtt agttcttatt ttgttctttc cgccgcccgc
     1621 accctgcatt attgataacc gtcgatgacg cacttcacac cgcaccagga aaaagccctc
     1681 aaggccgtgg gcgactggct ccgagcaaaa cccggggcca acggcacgcc gcaggtcttc
     1741 cgcttgttcg gctacgcagg taccgggaag accacgcttg ccagacatat tgccgatgct
     1801 gccgatggcg aggtgaagtt cgcagccttc accggcaaag ccgcttcggt catgcgcggc
     1861 aagggctgcc gtggcgcctc aaccattcac ggcctgattt acagggcgcg cgaaagcgga
     1921 gaggagatac cgagcttcga cttgtgggat gaggcgcccg cgtcaaaagc cgagctgatc
     1981 atcatagatg agtgctcgat ggtcgacgcg gaacttggac gcgatctcct ctcgtttggc
     2041 gtgcccgtgc tggtgctggg cgaccccgct caactgccgc cgatccaggg tggcggtttt
     2101 ttcaccgagg ccgaagccga tgcaatgctc acggaggtgc accggcaggc ccaggacgat
     2161 ccaatcgttc ggctctcgat ggacatccgg gccggtgaat acatcgagcc gggccgctac
     2221 ggcgagacag aaatactgcg caagaacgat ctcgatccgg agcgcgtact cgaagccgat
     2281 caggtgctgg ttggacgcaa tgtcacgcgg cgcgcataca acgcccgcat gcgcgaacga
     2341 cgcggcttta cagacgaaat gccttcggcc ggcgacaagc tggtctgttt gcgcaataac
     2401 cgcaagaaag gcctgttcaa cggcggactg tggacagtca aagagcgcag cgggcgcaag
     2461 ggaagcgcaa aggctggtat tctgacgatg cggctcttgc ctgatgatga caccgccagg
     2521 cgtggcataa aggtctccgt gcgtccggaa tgtttttccg gcggaatcga gcaggtcgac
     2581 tggccgcggc gcaagcccta cgacgaattt gactacggtt acgtgttgac tgtgcacaag
     2641 gcgcaaggct cgcaatggaa tgacgttgtg ctgtttgatg agtcattcgc ctttccggat
     2701 agcggcgcgc gctggcttta tacgggcgtc acgcgcgccg cgaagaagct gacgctggtg
     2761 gtgtagaaca tcgtcgtcgg cgggcttatt cggccaggcg aacgaattcc gttacactca
     2821 aaaaacacgt ttccgcgcca gcgaaaggct tgcaagagca atggcggtga tcaacgcgcc
     2881 cgctaaaaat gtgccgcttg gtccaacctg atcccacagc gcaccggcga gaatgcttgc
     2941 agccagcaag gcgacgccgc tcaccagatt gaacatgccg aaagcagtgc cgcgcagctc
     3001 cgccggcgcg gtgtcggcaa ccagcgccgc cagaagtccc tgcgtcagtc ccatgtgcag
     3061 cccccagagc gccacgccga ccatgatc
//
LOCUS       DATDHO010000212         8848 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_9481, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000212 DATDHO010000000
VERSION     DATDHO010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8848)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8848)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8848
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9481"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..902
                     /locus_tag="VIY07_04185"
     CDS             <1..902
                     /locus_tag="VIY07_04185"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6380985.1"
                     /translation="FLVPLAFLVVALIYPDVLRLTPEKAAVAATAILIALAMIFGYRG
                     KRLGIGEILYAIMETGRVSLDIILIGAAAGIMVGIMSISGLAFSMTIQLLTLAGGNIF
                     LLLLLIAILAFVLGIGLPTISVYILTATLLAPALVKLGVTPMAAHMFVMYNGILSMIT
                     PPVAFAAYAAANIARTDGWTTGWIACVVGWSTFILPFLFVLTPSLLMDGSWTEIVLNT
                     SRVTFGIWLGTIAAVGFSFARLNAIGRAIYAVISLAVVLPPEAFTGAIWINAAGVTAA
                     IVVLSIDWVRGKKGAAEVPATPY"
     gene            complement(916..1980)
                     /gene="gtdA"
                     /locus_tag="VIY07_04190"
     CDS             complement(916..1980)
                     /gene="gtdA"
                     /locus_tag="VIY07_04190"
                     /EC_number="1.13.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047922 - gentisate 1,2-dioxygenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gentisate 1,2-dioxygenase"
                     /protein_id="HEY6380986.1"
                     /translation="MTLAIDTAKTGNKHNITGARQAYYDKISKYHLAPLWEVLKGLVT
                     PEPKTQMQPALWKFPEVEKLMLEAGDVITAEEAERRVLVLENPGEPGKSRITNSLFAG
                     IQLILPGEIADAHQHVASAIRFVLKGKGAYTAVEGEKAQMEHGDFIITANWAPHDHGN
                     PGKEPVMWLDVLDMPTVNHFQASFASHFDEKMQNVNHQDGDSFERYATGVLPDGAPIH
                     LNRSPVINYPYAKMRPILERLKSTGDIDSRHGARVRYANPINGGPVLPTMGASLALLP
                     KGFKGEPYRSTDGTIFAVAEGQGTTIIDGKPFEWNVNDVFVVPPWKRYSHNVTGGDAV
                     LFSISDRPAQEALGIWREGN"
     gene            complement(2095..2505)
                     /locus_tag="VIY07_04195"
     CDS             complement(2095..2505)
                     /locus_tag="VIY07_04195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012710162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY6380987.1"
                     /translation="MKVDGRCHCGYIRYEAEIDPDTVAICNCTDCQTLSGSAFRTVVP
                     TKKGSFKLLQGELKIYVKTGESGNKRPQSFCPHCGSPIYSTSTEPGLKVHSIRVGTLN
                     QRDQLAPKLQYWHRSAQRWTSGIGALPVLEKQRQ"
     gene            complement(2520..3284)
                     /locus_tag="VIY07_04200"
     CDS             complement(2520..3284)
                     /locus_tag="VIY07_04200"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEY6380988.1"
                     /translation="MPRLAGKAAIVTGGAKGIGRHYSQALAAEGARVMIADIADGSEL
                     AEEIAGRHGANSVASVKFDVSDEKQVQRLVSQTIDRFGQIDILVNNAALYAKLKPRNF
                     VEWDNETWDRVMAINVRGSFLMVKHVAPHMMERRTGKIINIASGSPYKGVPRMLPYVT
                     SKGAILAFTRSLSRELGEYGIAVNSLSPGYTLSDTGLENVTHVEEERVRVRNSRAFKR
                     DAYPEDLLGALLFLASSDSDFVTGQSLVVDGGSVNN"
     gene            3479..4078
                     /locus_tag="VIY07_04205"
     CDS             3479..4078
                     /locus_tag="VIY07_04205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY6380989.1"
                     /translation="MARDTADRLAIRALIENWVLWRDARMWDRFRTVWHKDGQMWATW
                     FQGSFEEFIRVSQEGYDRGVRIMHMLGGMSIDIKGKRAIAQTKMTISQRAPVEGVVCD
                     VVCTGRFYDFLEKRGGKWGIVLRRLAYEKDRIDPVEPDAKLSLDKTLLAQFPEGYRHL
                     AYLQSKIGYKIRDELPGLDGPALDALYAKGDAWLKGKKL"
     gene            4112..4495
                     /locus_tag="VIY07_04210"
     CDS             4112..4495
                     /locus_tag="VIY07_04210"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY6380990.1"
                     /translation="MSLADKFNLLNEFNVLRIICAVFFIPHIVGKITVPATLEFFVKA
                     GFKPPATWMYIAGTIETFLCIGLFFGIYLKYVAFIAFIHLLVAAAATYKVTKSWIWVI
                     GGIEYCVFWAICCLVVAMHAFHTGT"
     gene            4528..5646
                     /locus_tag="VIY07_04215"
     CDS             4528..5646
                     /locus_tag="VIY07_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HEY6380991.1"
                     /translation="MASVLFSPITLRGLTLPNRVVVSPMCQYNSDNGSANDWHLMHLG
                     NMSLGCAGLVMCEMTNVNPQGRISPKCAGMWSDDNEKALKRVHDFCRQYGVAKLGVQL
                     AHAGRKGPTTPPAAGGKPILTKEEGGWTPEAPSAIPYDSGWTVPHAMTKDDIKRCLRE
                     FAEAAKRVDRIGYDVIELHSAHGYLAHQFLSPLSNQRIDEYGGSLENRMRFAIEMYES
                     VRAVWPEHKPLGMRVSATDWVDGGWTPEETVILAKELKKRGMDYMDVSSGGLDPRQKI
                     PLAPGYQAPFAEKVKKESGITTMTVGLIAGYQQAEDIVASGKADLICLARGAMWDPRW
                     AWHAAEELGAETPYAPKMMGCHPKLRPQLFPKRAQAAG"
     gene            complement(5791..6369)
                     /locus_tag="VIY07_04220"
     CDS             complement(5791..6369)
                     /locus_tag="VIY07_04220"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HEY6380992.1"
                     /translation="MAEGDKFNVLVICGSLRKRSYNAALTRALPDLAPPDMKFVTAPP
                     LETLPLYNADTQEASGFPGPAEDLATAIRAADGVLFVSPEYNWSMPGGLKNAIDWVSR
                     MKEQPFEGKPVAIQSCSQGPLGGARMQYHWRMSMTFLKAFIFGTPEVFVGNSASKFDK
                     ETLALTDQGTKDAVKAQLAAFAKFINRMKVSA"
     gene            complement(6425..7399)
                     /locus_tag="VIY07_04225"
     CDS             complement(6425..7399)
                     /locus_tag="VIY07_04225"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6380993.1"
                     /translation="MIARVTVVIYSIVVAAMAQLVPAAAQDWPSRPVHILVGFGAGGG
                     TDVATRILADGLSEALGQQFTVENRPGAGGTIAGGAAARAPKDGYNLLAISMGHAVSA
                     VTVKQVPYDPINDFAPVGIFTNSAFVVAVAKNSPVTDIKGLVEYINKQPGKLNYSTVG
                     LGSTQHLIAEHLRQRTSMNAQPVSYRTSGEVVSALLRGDAAFAVELYHSIRGQVDSGD
                     LRLIAVATPNRWPGLENVPTLAESGVPGIAYLGWYGLVFPAGTPQPVVDKLHKTMKEV
                     LAKDAVKKRLETAGAVANLSSPAEFRKVIESDIKGFQEVAKTAGLEAK"
     gene            complement(7501..8376)
                     /locus_tag="VIY07_04230"
     CDS             complement(7501..8376)
                     /locus_tag="VIY07_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY6380994.1"
                     /translation="MKIVGFESNGARLGVIDGHHVVDLQIADANIPNDLGELLRRSNG
                     DLKPITDIARKAPGSARRPLSGLTYALPVARPGKIICLGLNYLEHVKEGPQRDNIPKF
                     PSIFFRVLTSMVPHLQPIVRPKESIQLDYEAEMVAIVGKRAKHLTMANAIDCIAGYSC
                     ANEGSVREFQRHTTQWGMGKNFDRTGGFGPWMVTADEVPPGGKGLKIQSRLNGNTMQS
                     DNTENMMFPLAETLVYLTKGMTLEPGDVILTGTPSGVGHARKPEPVWMKPGDTCEIEI
                     EGIGVLRNPIADEKA"
     gene            complement(8463..>8848)
                     /locus_tag="VIY07_04235"
     CDS             complement(8463..>8848)
                     /locus_tag="VIY07_04235"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HEY6380995.1"
                     /translation="LIKSADVLNAAYNDVEGVTAQFNLNLLTRINRELGGSFQLDTFE
                     HHAFYNRERHRVEMHLASLKRQKVKVAGDTIDFRAGETIHTENSYKYSIESLSALARG
                     VGWLPVAAWMDSRKYFSLQAFKLGV"
BASE COUNT         1699 a         2662 c         2634 g         1853 t
ORIGIN      
        1 actttctggt gccgctggcg ttcctggtgg tcgcgctcat ctaccccgat gtcttgcggc
       61 tcaccccgga gaaagcggca gtcgccgcaa ccgcgatcct gatcgctttg gcaatgatct
      121 ttggctatcg cggcaagcgg ctcggcatcg gcgaaattct ctacgccatc atggagaccg
      181 gccgcgtctc gctcgacatc atcctcatcg gcgcggcggc cggcatcatg gtcggtatca
      241 tgagcatctc gggtctcgcg ttcagcatga cgatccagct cctgacgctc gccggcggca
      301 acatatttct gctgctgctc ttgatcgcga tcctcgcctt cgtgctcggc atcggccttc
      361 cgaccattag cgtctatatc ctgaccgcaa cgctgctggc tccggcgctg gtcaagctcg
      421 gcgtcacgcc gatggccgcg catatgttcg tcatgtacaa cggcattctc tcaatgatca
      481 cgccgccggt tgctttcgca gcctatgccg ccgccaatat tgcgcgcacc gatggctgga
      541 cgaccggctg gattgcctgc gtggtcggct ggtcgacttt catcctgccg tttctttttg
      601 tgctgacgcc aagcctgctg atggacggct cgtggaccga aatcgtcctc aatacatcgc
      661 gcgtcacctt cggaatttgg cttggcacga tagcggcggt cggcttctcg tttgcgcggc
      721 ttaatgccat tggccgcgca atctatgccg tgatctcgct cgccgtggtg ctgccgccgg
      781 aagcctttac gggcgcgatc tggatcaacg ctgccggcgt cacggcggca atcgtcgtac
      841 tcagcatcga ctgggtgcgc ggcaaaaagg gcgccgccga agtgccggcg acgccctact
      901 gaacactaaa tcggctcagt tgccctcgcg ccagatgcca agcgcttcct gagcgggccg
      961 gtccgatatc gagaacaaga ccgcatcgcc gccggtcacg ttatgcgaat agcgtttcca
     1021 cggcggcaca acgaagacgt cgttgacgtt ccattcgaat ggcttgccgt caataatcgt
     1081 ggtgccttgg ccttctgcga ccgcgaagat ggtgccgtcg gtcgaccggt agggttcgcc
     1141 cttgaagccc ttcggcaata gcgcaagcga ggcgcccatg gtcggcagca ccgggccgcc
     1201 attgatcgga ttggcatagc gcacgcgcgc gccgtgacgg ctgtcgatgt cgcccgtcga
     1261 cttcagccgc tcgaggatcg gccgcatctt ggcatacgga tagttgatca ccggggagcg
     1321 gttgagatgg atcggtgcac catcggggag aacgccggtc gcatagcgct cgaaggagtc
     1381 gccgtcctga tgattgacgt tctgcatctt ctcgtcgaag tgcgacgcga acgatgcctg
     1441 gaaatgattg accgtcggca tgtccagcac gtcgagccac atgaccggct ccttgcccgg
     1501 attgccgtga tcgtgcggag cccagttggc tgtaatgatg aagtcgccgt gctccatctg
     1561 cgccttctca ccctcgaccg ccgtgtaggc gcccttgcct ttgagcacga agcggatggc
     1621 ggaggcgacg tgttgatgcg cgtcggcgat ttcgcctggc agaatcaact ggatgccggc
     1681 gaagagcgaa ttggtaatgc gcgacttgcc gggctcgccg ggattctcca ggaccagcac
     1741 gcgacgttcc gcctcctcgg cggtgatgac gtcgccggcc tcgagcatca gcttctcgac
     1801 ttcgggaaac ttccacagcg ccggctgcat ctgggttttc ggctcgggcg tcaccagacc
     1861 cttgagcact tcccacagcg gcgcgagatg atatttggaa atcttgtcgt agtaggcctg
     1921 acgtgcgccc gtgatgttgt gcttgttgcc ggtcttcgcg gtgtcaatcg cgagcgtcat
     1981 tgggattcct ccgtgaatcg ttcattttat ttactgggaa tataacccac cgcaggcgcc
     2041 gcttaaaccc gcgaaaccag gcgcatagcg gctatgtagc gcccaggctc ttgcctattg
     2101 acgctgcttc tctaacactg gcagcgcacc gatgcccgag gtccaacgct gagcggaccg
     2161 gtgccagtac tgcagcttgg gcgcgagttg atcgcgctgg ttgagggtgc cgacccggat
     2221 cgaatggacc ttcagaccgg gttcagtgct ggtcgagtag atcggcgagc cgcaatgggg
     2281 gcaaaaagat tgcggccgct tgtttccact ctctccggtc ttgacgtaga tcttcaactc
     2341 accctgcaag agcttgaagc tgcctttttt tgtcggcacc acggtgcgga acgccgaacc
     2401 ggacaaggtc tgacaatcgg tgcagttgca gatcgcaacc gtatccggat cgatttcagc
     2461 ttcgtaacgg atgtagccac aatggcaccg gccgtcgacc ttcatcgctc cattctcctt
     2521 cagttgttga ccgatcctcc atcgaccacg agcgactgac ctgtcacgaa atcgctgtcg
     2581 cttgacgcca ggaacagaag cgcgccgaga agatcttctg gatatgcgtc gcgcttgaag
     2641 gctcggctat tgcgcacgcg cacgcgctcc tcctcgacgt gggtgacgtt ttcgagtccg
     2701 gtgtcactga gcgtatagcc gggcgagagc gaattgaccg cgatgccata ttcgccaagc
     2761 tcgcgcgaca aggatcgcgt gaacgcgagt atcgcaccct tggacgtcac ataaggcagc
     2821 atgcggggca cacccttgta cggagatccc gatgcaatgt tgatgatctt tccggtgcgg
     2881 cgctccatca tgtgcggcgc aacgtgtttc accatcagaa atgatccgcg cacgtttatc
     2941 gccatgacgc gatcccaggt ctcattgtcc cactcgacga aattgcgtgg cttgagcttt
     3001 gcgtaaaggg cggcattgtt gaccaaaatg tcgatctggc cgaaacgatc gatcgtctgg
     3061 ctgacgagtc gctgcacctg tttttcgtcg ctcacatcga acttgacgct cgccaccgaa
     3121 ttcgcgccat gccgtccggc gatctcctcg gcgagctcgc tcccgtcggc aatgtcggca
     3181 atcatcacgc gtgcaccttc ggcagcgagg gcctgcgaat agtgccggcc aattcctttt
     3241 gcgccgcctg tcacaattgc ggctttaccg gcgagcctcg gcatgactgc tactccacgc
     3301 aatccgtcat gcccgcgctt gtcgcgggca tccacgtctt gcaagatcgc caccataaag
     3361 acgtggatgg cacgcgcaac tgcggcctgc cggagttgcg ccgcttctta tagagtggcc
     3421 gcaagtcggc tagacccgac ttgcgggtga caagcccggc cagacggggg agtttctcat
     3481 ggcgcgcgat acggcagatc gcctggcaat ccgggcgctg atcgagaatt gggtgctctg
     3541 gcgtgacgcc cgcatgtggg accgtttccg gacggtctgg cacaaggacg ggcagatgtg
     3601 ggcgacctgg tttcagggct cgttcgaaga attcatccgt gtcagccagg aaggttacga
     3661 tcgcggcgtg cgcatcatgc acatgctggg cggcatgagc atcgacatca aaggcaagcg
     3721 ggcaatcgcg cagaccaaga tgacgatctc gcaacgggct ccggttgagg gggtggtctg
     3781 cgacgtcgtg tgcaccggcc gcttctacga tttccttgag aagcgcgggg gcaaatgggg
     3841 cattgtgctg cgccggctcg cctatgaaaa ggaccgcatc gatccggtcg agccggacgc
     3901 caagctgtca ctcgacaaaa cgcttctggc gcagtttccg gaaggttatc gccacctcgc
     3961 ctatctacag agcaagatcg gatacaagat tagggatgaa ttgcccggtc tcgacgggcc
     4021 tgcgctcgat gcgctttacg ccaagggcga tgcttggttg aagggaaaga agctttaggc
     4081 gaaagttaag gacctaatgg gggaaggcgc catgtcgctt gccgacaaat tcaatctgct
     4141 caacgaattc aatgttctgc gaataatctg cgcggtgttt ttcattcccc atatcgtcgg
     4201 aaaaattaca gtaccggcga cgcttgagtt tttcgtcaaa gccggcttca agccgcccgc
     4261 tacctggatg tatatcgcag gaacgattga gacgttcctc tgtatcggct tgtttttcgg
     4321 catctacctg aagtatgtcg cattcatcgc cttcatccat ctgctggtcg ctgccgccgc
     4381 gacctataag gtgaccaaaa gctggatttg ggtaattggc ggcatcgaat attgcgtgtt
     4441 ctgggcgatc tgctgtctgg tcgtcgccat gcacgccttc cataccggca cgtaaaattt
     4501 tctcttcgct gaaaggaaat ctccccaatg gctagcgttc tgttctctcc catcaccttg
     4561 cgtggcctga ccctgccgaa ccgggtcgtg gtctcgccga tgtgccaata caactccgat
     4621 aacggctcgg ccaatgattg gcacctgatg catctcggca atatgtcgct cggctgcgcc
     4681 gggctggtga tgtgcgagat gaccaacgtc aacccgcagg gccgcatctc gccaaaatgc
     4741 gccggcatgt ggtcggacga caacgaaaag gcgctcaagc gcgtgcacga tttttgccgc
     4801 caatatggcg ttgcgaaact gggcgtacag ctcgcgcacg ccggccgcaa gggccctacc
     4861 acgccgccgg cagccggtgg gaagcctatc ctgaccaagg aagaaggcgg ctggacgccg
     4921 gaggcgccgt cagcgatccc ttacgactcg ggctggacgg tcccgcacgc aatgaccaag
     4981 gacgacatca agcggtgcct gcgcgaattc gcggaagccg ccaagcgcgt cgatcgcatc
     5041 ggttacgacg tgatcgaatt gcatagcgct cacggttatc tggcgcatca attcctatcg
     5101 ccgctctcga accagcgcat cgacgaatac ggcggatcac tcgaaaaccg catgcgtttt
     5161 gcaatcgaga tgtacgaatc cgtgcgcgcc gtatggccgg agcacaagcc gctcggaatg
     5221 cgcgtctccg cgaccgactg ggtcgatggt ggctggacgc cggaggaaac agtgatcctg
     5281 gcgaaggagc tcaagaagcg cggcatggat tacatggacg tatccagtgg cgggcttgat
     5341 ccgcggcaga agatcccgct tgcccccggc tatcaggcgc cttttgccga gaaggtgaag
     5401 aaggagagcg gaatcaccac gatgaccgtc ggtctgatcg cgggttatca gcaggcggag
     5461 gacattgtcg cctccggcaa ggcggacctg atttgcctcg cgcgtggagc gatgtgggat
     5521 ccgcgctggg cctggcacgc ggccgaggaa ctgggcgccg agacgcccta cgcaccaaag
     5581 atgatgggat gccatccgaa gctgcggccg cagctttttc cgaagcgggc gcaggcggcg
     5641 gggtagcaag tctggaccgc gcccaccgat gtcatgcgcg ggccctgacc cgcgcatcca
     5701 cgtcttacaa ccgcgcagca aagacgtgga tggccggggc ataggcgtgc gaaagcacgc
     5761 cgtccttcgg acgtatgccc ggccatgaca ctaggcactc accttcatac gattgataaa
     5821 cttcgcaaac gcggcgagct gcgccttgac cgcatccttc gtgccctgat cggtcagcgc
     5881 cagagtctcc ttgtcgaact tgctcgcgga atttcccaca aacacttcgg gcgtgccgaa
     5941 gatgaaggct ttcaggaagg tcatcgacat gcgccaatga tattgcatgc gcgcaccgcc
     6001 aagaggccct tgcgagcagg actggatcgc gaccggcttg ccctcgaacg gctgctcctt
     6061 catgcgcgat acccagtcga ttgcgttttt caatccaccc ggcatcgacc agttgtattc
     6121 gggtgacacg aacagaaccc cgtcggcagc gcggatcgcg gtcgcgaggt cttccgccgg
     6181 acctgggaag cccgaggctt cctgggtatc ggcattgtac agcggcaacg tttcaagcgg
     6241 cggagcagtg acaaacttca tgtcgggtgg cgccaggtcc ggcaaggcgc gggtcaacgc
     6301 cgcattgtac gagcgcttgc gtagcgaacc gcagatcaca agcacattga atttgtcacc
     6361 ttcagccata gccagccctt ccgatgaaat ctctcaccat tccgatttga tgatgccgat
     6421 gacgctattt ggcttcgagg ccggccgttt tggcgacttc ctgaaagccc ttaatgtcgg
     6481 actcgatgac cttgcgaaat tcggcaggcg acgacaggtt cgcaaccgca cccgcagtct
     6541 cgagccgctt tttaaccgcg tctttggcca gcacctcttt cattgtcttg tgaagcttgt
     6601 cgacgaccgg ctgtggcgtc ccggccggaa agacgagtcc gtaccagccg aggtaagcaa
     6661 ttcccggcac gccgctctcc gcgagagtgg gaacattctc aagtcccggc caacggttcg
     6721 gcgtggcaac ggcgatgaga cgcaagtcgc ctgaatccac ctggccgcga atggaatgat
     6781 agagctcgac cgcgaaagcc gcatcgccac gcagcaatgc gctgaccact tcgcccgacg
     6841 tgcggtagga aaccggctgc gcgttcattg atgtgcgttg gcgcaaatgc tcggcgatga
     6901 gatgctgcgt cgagcccaac cctacagttg aatagttcaa cttgcccggc tgtttgttga
     6961 tgtattcgac aagacccttg atgtcggtca cgggcgaatt ttttgcgaca gcgacaacga
     7021 aggcggaatt ggtgaagatg ccgaccggcg cgaaatcgtt gatcggatcg tacggcactt
     7081 gtttcaccgt gaccgcggac accgcgtggc ccatgctgat ggcgagaagg ttgtaaccgt
     7141 ccttgggcgc cctggcggcc gctccgccgg ctatcgttcc gcctgccccc gggcgatttt
     7201 cgacggtgaa ttgctggccg agcgcttccg acagaccatc cgccaggatg cgggtcgcaa
     7261 catccgttcc tccccccgca ccgaagccaa ccagaatgtg gaccgggcgc gatggccaat
     7321 cctgcgcggc agcgggcacg agctgcgcca tagctgccac gacaatgctg tagatgacga
     7381 ctgtgacacg cgcgatcatc ggcgttcccc ttttttggcg cgccgctgtc cgggccgcct
     7441 ctggtgtgaa cgacacgcta agggaacgtg gccaggggac cgattgtcaa gcggccgaga
     7501 tcaagccttt tcgtccgcaa tcggattgcg caatacgcca atgccctcaa tttcgatctc
     7561 gcaggtatcg cctggcttca tccagaccgg ctcgggcttg cgcgcgtgac ccacgccgga
     7621 tggcgtgccg gtcaggatca catcgcctgg ctccagcgtc atgcccttgg tgagatagac
     7681 cagcgtctcg gcaagcggaa acatcatgtt ttcggtgtta tcggactgca tggtgttgcc
     7741 gttcagccgg ctctggattt tcaaaccctt gccgcccggc gggacttcgt ccgccgtgac
     7801 catccagggg ccgaagccac ccgtgcgatc aaaattcttg cccatccccc actgcgtggt
     7861 atggcgctgg aattcacgca ccgatccttc attcgcgcag gagtaaccgg caatgcagtc
     7921 gatcgcgttg gccatggtga gatgcttcgc gcgcttgccg acgattgcca ccatctcggc
     7981 ttcgtaatcg agttggatcg attctttcgg acgcacaatc ggctgcagat gcggaaccat
     8041 ggaggtaagc acacggaaaa aaatcgacgg aaattttgga atattgtcgc gttgcggacc
     8101 ttccttcaca tgctcgagat agttcaaccc caggcaaatg atttttcccg gccgcgccac
     8161 tggcaatgcg tatgtcagtc cgctcagcgg tcgacgagct gagccgggcg cctttctggc
     8221 aatgtcggtg atgggtttta ggtcaccatt gctccggcgc aacagttcgc cgagatcgtt
     8281 gggtatattt gcatctgcaa tctgtaaatc gacgacgtga tggccatcga tcacgcccag
     8341 ccgcgcgcca ttggattcaa aaccgacgat cttcatgagc cctgccttgc ttgatgagtg
     8401 cgtccggccc gcgagaatgg ccggcccgca acgcttagcg caggccaagc aagtcgagca
     8461 agtcacacgc cgagtttgaa cgcctggagg gaaaaatatt tgcgcgagtc catccatgcc
     8521 gcgaccggca gccagcccac gccccgcgcg agcgccgaga gcgactcgat gctgtacttg
     8581 tagctgttct cggtatgaat cgtttcgccg gcgcggaaat cgatcgtgtc tccagcgacc
     8641 ttcacttttt gccgcttgag gctggcgaga tgcatttcga cgcgatgacg ctcgcggttg
     8701 taaaacgcgt gatgctcgaa ggtgtcgagc tggaacgagc cgccaagctc gcggttaatt
     8761 cgcgtcaaca ggttgagatt gaactgcgcg gtgacgcctt ccacatcgtt ataggcggcg
     8821 ttgaggacat cggccgattt aatgagat
//
LOCUS       DATDHO010000213         2022 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_453895, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000213 DATDHO010000000
VERSION     DATDHO010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_453895"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VIY07_04240"
     CDS             <1..440
                     /locus_tag="VIY07_04240"
                     /inference="COORDINATES: protein motif:HMM:NF015948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF362 domain-containing protein"
                     /protein_id="HEY6380996.1"
                     /translation="GRGRMHERSVWDGRRFPGGIQGSQPHGSGYHVPRVVADLCAARP
                     VDLAIVDGITSMAGGEGSWTPPLRFTEPGVLVVGLNPVSTDAVATAVMGYSNPRAASG
                     MPPFEKCDNQLLLAEQLGIGTADLSRIDVLGLTLEQARYSYAG"
     gene            complement(493..996)
                     /gene="tpx"
                     /locus_tag="VIY07_04245"
     CDS             complement(493..996)
                     /gene="tpx"
                     /locus_tag="VIY07_04245"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000391610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0016684 - oxidoreductase activity, acting
                     on peroxide as acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HEY6380997.1"
                     /translation="MASVTFKGNPVTLVGNEVKVGQPAPDFTAQRADDLSNYTVNTSA
                     GKTRILVSVPSLDTPVCDTESRRFNQEAAKLPNVEIVCVSMDLPFAQKRWCGAAGVDK
                     LVAVSDHRDGSFGKNYGVLISGGPLDRLDARAVFVVGADNKVKYVEYVPDIAEQPNYE
                     AALAAAR"
     gene            1160..1876
                     /locus_tag="VIY07_04250"
     CDS             1160..1876
                     /locus_tag="VIY07_04250"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1080 domain-containing protein"
                     /protein_id="HEY6380998.1"
                     /translation="MKRRSFVSLFTAAPIAAGQLIRPQRSGDMRDPDQHYNEGWTSLF
                     DGKDFGKLVVVLRAEEGKSRRFFDERMTEQSTFYIENGLLKTTGKPNGYIRTGDVYDN
                     YVFHVEVRFTERGNSGVLIHIQRDDVWPQAIECQLYQAHMGRIFPIQGAYLEGGEMIH
                     ENSKPVGEWNTYEVYSEEGRVATVLNGAVIGLGSNSNPRIGHIALQAEGVPAEFRNIR
                     VRRHAPSHILWPKGEPPKTR"
BASE COUNT          416 a          585 c          631 g          390 t
ORIGIN      
        1 agggccgcgg ccgtatgcac gagcgcagcg tctgggacgg ccggcggttt cccggcggca
       61 ttcagggatc acagccccat ggctctggat atcatgtgcc gcgagtggtg gccgacctat
      121 gcgccgcccg cccggtagac ctggcgatcg tggacggcat tacgtcaatg gccgggggcg
      181 agggctcctg gacgccgccg ctccggttta ccgagccggg agtccttgtc gtagggctta
      241 atccggtttc gacggatgcg gtagccacag ccgtgatggg ctactcgaac ccgcgcgccg
      301 ccagtggaat gcctccattc gagaagtgcg acaaccagtt gctcctcgca gagcaactcg
      361 gaatcggaac ggccgacctc tcccggatcg acgtcctggg cttgaccctg gaacaggccc
      421 ggtattcgta cgccggctag cggcggaatc acggttgacg aacagggccc tcgggtccat
      481 ggtcataagc ggtcaccgcg ccgcagccag cgctgcctcg tagtttggtt gttccgcgat
      541 atccgggaca tattcaacat atttgacctt attgtcggcg ccgacgacaa acaccgcgcg
      601 cgcgtccaag cgatccaacg gtccgccgct gatcaggacc ccgtaattct tgccgaacga
      661 gccatcgcgg tgatcgctca cggcgaccag cttgtcgacg ccggcggcgc cgcaccaccg
      721 cttctgcgcg aaagggagat ccatgctgac gcagacgatc tcgacgttgg ggagcttggc
      781 cgcctcctgg ttgaagcggc gtgactcggt atcgcatacc ggcgtgtcga gcgacggcac
      841 ggagaccaga atgcgagttt ttccggccga ggtgttgaca gtgtaattgc tcaaatcgtc
      901 ggcgcgttgc gccgtgaaat ccggcgctgg ctgcccgact ttgacttcgt ttccgacgag
      961 ggttactgga tttcctttaa aagtaactga agccatgtgg atctccttat gggaaaatga
     1021 gacgtctcgc acgcgtctag tcttcgtaac gtattgccag attccaaagg gtggataata
     1081 aacgttccca tgacaatctc aaaccaggaa acgtgcaaga cgcttttctt ttctatgcta
     1141 agtttgggag gaggcgccga tgaaacgcag gtcctttgta agcctgttca ccgcggcccc
     1201 gatcgcggcc ggccagttga ttcgccctca gcgatctggc gatatgcgcg acccggatca
     1261 gcactataac gagggctgga cgtcgctgtt cgatggcaag gatttcggga aactcgtggt
     1321 cgtactgcgc gcggaggaag gcaagtcacg gcgcttcttc gacgagagaa tgaccgagca
     1381 gtcgactttt tatatcgaga acggtctgct caagacgaca ggcaagccga acggctacat
     1441 ccgaacgggc gacgtctacg acaattatgt cttccacgtg gaggtgagat tcacggagcg
     1501 cggcaacagc ggcgtgctga ttcatatcca gcgcgatgac gtgtggccgc aggcgattga
     1561 gtgccagctt taccaggcgc acatgggccg catcttcccg atccagggag cctatctgga
     1621 ggggggcgag atgatccacg agaattcgaa gccggtgggt gagtggaaca cttacgaggt
     1681 gtattcggag gaagggcgtg ttgctaccgt gctgaacggc gcggtgatcg gcctggggtc
     1741 caactcgaat ccacgaatcg gccacatcgc gctgcaggcc gagggcgtgc cggcggagtt
     1801 ccggaacatt cgcgtgagac ggcatgcccc atcccacatc ctttggccga agggtgaacc
     1861 gccaaagact cgctagcatc acgaatacca ccaagacgac acgaagaact aagggttcgc
     1921 gcagaaacaa gttcgcattc tgctgcgggc cgcagcccga aggggcgaga ctcctcggcg
     1981 tgcttagcga acagaaaacg gttcatgatt gaccaccgac tc
//
LOCUS       DATDHO010000214         2744 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_356017, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000214 DATDHO010000000
VERSION     DATDHO010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356017"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..551
                     /locus_tag="VIY07_04255"
     CDS             <1..551
                     /locus_tag="VIY07_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6380999.1"
                     /translation="VAAHGPTRILVNCAGVGPAKRIVGREGPMPLADFERVIRINLIG
                     TFNMMRLVAAAMQAAEPLPGGERGVIVSTASVAAFEGQIGQAAYASSKGGVAALTLPA
                     AREFAQFGVRVLAIAPGIFGTPMLRALPQEVQDSLGASVPFPKRLGEPREFAALVLHC
                     IHNAYLNGEIIRLDGALRMAPR"
     gene            682..1095
                     /locus_tag="VIY07_04260"
     CDS             682..1095
                     /locus_tag="VIY07_04260"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY6381000.1"
                     /translation="MNAFSSTRTVRIEWGDCDPAGIIFYPRYFEIFDASTTLLFERAL
                     GMTKLKMFKHFDFDGFPLVRTRARFLKPTRFGDDVSVRSTIQFGRSSFDIEHHLSLDG
                     DTCVECSERRVWIVRDDKGQLKSQPVPDAVLAKFR"
     gene            complement(1098..1481)
                     /locus_tag="VIY07_04265"
     CDS             complement(1098..1481)
                     /locus_tag="VIY07_04265"
                     /inference="COORDINATES: protein motif:HMM:NF013231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY6381001.1"
                     /translation="MAQEAAFQAFSRLSQEIGESPGRFATLTLIARNPGISQTVLSLA
                     NGRDKSSLTPVVEDLVRRGLVERRRMDSDRRTYSLNLTPAGKKVLTTLTRCARRHERH
                     LDQVIGARDRKRFIQILKKIAAEIE"
     gene            1740..>2744
                     /locus_tag="VIY07_04270"
     CDS             1740..>2744
                     /locus_tag="VIY07_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY6381002.1"
                     /translation="MKLRFAGCVYAAALLIGAATGAFAQEKTFELKLAHWVPPSHPLQ
                     KALEEWGAAVEKASGGTLRYKVYPSQQLGKAFDHYDMARDGIADLTYVNPGYQPGRFP
                     IIGAGELPFLFANASSGSQALDAWYRKYADREMKDVKFCLAFVHDPDSFHSKTKKITV
                     PDDIKGMKIRPAHATMASFVTQLGGTNVQAAAPEVRDILEKGVADGVTFPWGSVPLFG
                     IDKVTKYHMDVPLYVTTFAFVFNKDKYNEMSPRQKKAIDDHCNNEWAGKVSAPWAEFE
                     HAGIAKIKAEAGHEVYSLTPAQVEEWKKAAKPLEQKWADNVKKAGGNSDAIMKELKDQ
                     L"
BASE COUNT          556 a          844 c          810 g          534 t
ORIGIN      
        1 ccgttgccgc gcatggaccg acgcgcatcc tcgtcaattg tgccggagtt ggaccggcca
       61 agcgcattgt tgggcgcgaa ggaccgatgc ccctcgccga ttttgagcgc gtcattcgca
      121 tcaaccttat cggcaccttc aacatgatgc ggctggttgc cgccgccatg caggccgcag
      181 aaccgctgcc aggcggcgag cgtggcgtaa tcgtttccac cgcctccgtt gccgcgttcg
      241 agggacagat cggacaggcc gcctacgcgt cttccaaggg cggggtcgct gcgctgacgc
      301 tgcctgcagc gcgcgaattc gcgcaattcg gcgttcgcgt actggccata gcgcccggaa
      361 tttttggcac gccgatgctg cgcgcattgc cgcaggaagt gcaggactct ctgggggcct
      421 cggtgccgtt tcccaagcgg ctcggcgagc cgcgcgagtt cgccgccctc gtcctgcatt
      481 gcatccacaa tgcctacctc aacggcgaaa taatccgact cgacggcgcg ctgcgcatgg
      541 caccgcgctg atgcatgctc tcttggactc gatcgatctc ccgttcattc ccgcgcaagc
      601 gggaatccag cggagttatc ctgttccact tgagctgggt ccccgcttgc gcggggacga
      661 acggatgaag gcattgccgc ggtgaacgca ttcagcagta cgcgtacggt tcggatcgaa
      721 tggggtgact gcgaccctgc cgggattatc ttctatccgc gctatttcga gatcttcgat
      781 gcatcgacaa cgcttctgtt cgagcgcgcg cttggcatga ccaaactcaa aatgttcaag
      841 cacttcgatt tcgacggctt tccgctcgtg cgcacgcgcg cgagattcct caagccgact
      901 cgtttcgggg atgacgtgtc agtcagaagc acaatacagt tcggtcgttc cagcttcgac
      961 atcgagcatc acctgagcct cgatggcgac acctgcgttg agtgctcgga gcgaagagtg
     1021 tggatcgtcc gcgacgacaa aggacagctc aaatcgcagc cggttccgga tgccgtgctg
     1081 gcgaagtttc gatagctcta ttcgatctcc gctgcgatct tctttaaaat ctggataaat
     1141 cgctttcggt cgcgcgcccc gatcacctga tcgaggtggc gctcatgccg ccgcgcgcag
     1201 cgcgtcagcg tcgtaagcac tttttttccg gccggcgtca ggttgaggct gtaggtgcgc
     1261 cggtcgctgt ccatccgcct tcgctccacg aggccccgcc tgaccagatc ctcgaccacg
     1321 ggagtgaggc tggacttatc gcggccgttg gcaagggata agaccgtctg gctgatgccg
     1381 gggttgcggg cgatcaaggt cagggtggcg aaacggccgg ggctttctcc gatctcctgc
     1441 gacaggcgcg aaaaggcctg gaaagcggct tcttgcgcca tgcgcaggtt gaagccaacc
     1501 caggagccga gcggaccgaa atttatcgac aggccaaagg cttcaccgtt cctgccgcgt
     1561 cgccggctgc caatgccgtt cgttccgtgc accgtgcgcc ccttctccaa agcggacaat
     1621 cagtccactg caagaattta gtttgacatc aaactaagct ttacaacgtc gcccgccttc
     1681 ggctgaatat tgcaaaagtt ggcgatctaa ccaacaccca acccccgagg gaggacccca
     1741 tgaaactccg tttcgccggg tgtgtctacg ctgccgctct attgatcggg gcagcgaccg
     1801 gcgcattcgc gcaagaaaag acgttcgaac tcaagctcgc ccactgggtg ccaccatcgc
     1861 atccgctgca aaaggccctg gaggaatggg gcgctgcggt cgagaaagca tcaggcggca
     1921 cgctgcgcta caaggtttat ccctcgcagc agctcggcaa ggccttcgac cactatgaca
     1981 tggcgcgcga cggcatcgcc gatctgacct atgtcaatcc cggttatcag ccggggcgct
     2041 tcccgattat cggcgcgggc gaactgccat ttctgtttgc caatgcgagc agcggctcac
     2101 aggcgcttga cgcctggtat cgcaaatacg ccgaccgcga gatgaaggac gtcaaatttt
     2161 gtttggcctt cgtgcacgat ccggactcgt ttcactccaa gaccaaaaaa atcaccgtgc
     2221 ccgacgacat caaaggcatg aagattcgtc cggcccacgc caccatggca agttttgtca
     2281 cccagctggg cggcaccaac gtccaggccg cagcgccgga agtgcgcgat attctcgaaa
     2341 agggtgtcgc cgatggggtg acattcccct ggggctcggt gccgttgttc ggcatcgaca
     2401 aagtcacgaa atatcacatg gacgttccac tctacgtgac gaccttcgcc tttgtgttca
     2461 ataaggacaa atacaacgag atgtcgccgc ggcagaaaaa ggcgatcgac gatcactgca
     2521 acaacgaatg ggccggcaag gtctcggcgc cgtgggccga gttcgagcac gcgggcatcg
     2581 ccaagatcaa ggcggaggca ggccacgaag tctattcgct cacgccggcg caggtcgagg
     2641 aatggaagaa agccgcgaag ccgctcgagc agaaatgggc cgacaacgtg aagaaagccg
     2701 ggggcaattc cgacgcgatc atgaaagagc tcaaagatca gctc
//
LOCUS       DATDHO010000215         1548 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_356067, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000215 DATDHO010000000
VERSION     DATDHO010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_356067"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(81..551)
                     /locus_tag="VIY07_04275"
     CDS             complement(81..551)
                     /locus_tag="VIY07_04275"
                     /inference="COORDINATES: protein motif:HMM:NF024910.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEY6381003.1"
                     /translation="MLKHLFRTKSLDRLISESEAPGKTLKRVLGPLDVTALGIGAIIG
                     AGIFATIGTAAAGDPSRPGAGPALALSFVITAVACGFAALCYAEFAAMIPVSGSAYTY
                     AYATLGEFVAWIIGWDLIIEYAVGNVAVAISWANYFKTLLSGFGIIVPDWLSTD"
     gene            592..>1548
                     /locus_tag="VIY07_04280"
     CDS             592..>1548
                     /locus_tag="VIY07_04280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381004.1"
                     /translation="MNDHKQDRSLPALLLLFVGSGCAALIYEIVWFQLLQLVIGSSAV
                     SLGVLLGTFMGGMCLGSFLLPRFINPGQHPLRVYAFIEIGIGAIGILVLFIVPLVGGL
                     YAAHVLDGFAGILFRAAICAVCLLPPTLLMGATLPAIARWVEPSRQGISWLGFFYGGN
                     IAGAVFGCLLAGFYLLRVYDMATATYVAAAINLAVALIGLLIAARTPHRIAVDSRAEA
                     PVERETSVRTVYAAIALSGLCALGAEVVWTRILSLLLGASVYTFSIILAVFLIGLGIG
                     SSAGSFISRTVNPRAALGYCQLLLMFGITWTAFMASRALPYWP"
BASE COUNT          266 a          465 c          455 g          362 t
ORIGIN      
        1 gccagaatgt tgaaaacgat gggaacgccg taaatatgag gcgcgttctc caggagtcca
       61 gggatccgca tggccgtgcg ttagtcggtg gatagccagt ccgggacgat gattccgaac
      121 cccgagagca gcgtcttgaa gtagtttgcc caactgatgg cgacggcaac atttcccacg
      181 gcgtattcga tgatcaggtc ccagccgatg atccatgcga cgaattcccc aagcgtcgca
      241 taggcatatg tgtacgcgct gcccgaaacg ggaatcatcg ccgcgaactc ggcgtaacaa
      301 agggcggcaa atccgcacgc gacagcggta atgacgaatg acagagccag cgccggacct
      361 gcgccgggcc tgctcggatc gccggccgca gccgtgccta tcgtggcgaa gatgccggcc
      421 ccgataatcg caccgatccc gagcgccgta acatcgagtg gccccaatac ccttttcagc
      481 gtctttccgg gcgcttcaga ttccgaaatg agccggtcca gactcttggt ccggaacagg
      541 tgtttgagca taaggcgcga atcttatggt agtatccgcc gttccgcaac tatgaatgac
      601 cacaagcaag accgatctct cccggcgctg ctgctgcttt tcgtcggaag cgggtgcgcg
      661 gcgctcatct acgaaatcgt ctggtttcaa cttcttcaac tggtgatcgg atcatcggca
      721 gtttcgctgg gtgtgctgct tggaacgttc atgggcggta tgtgcctggg cagttttctg
      781 ctgccgcgct tcatcaatcc cgggcagcat ccgctgcgcg tctacgcttt cattgagatc
      841 ggtatcggtg cgatcgggat tctcgttctg ttcatcgtgc cgctcgttgg aggcctttat
      901 gcggcgcacg tcctggacgg cttcgcggga attctctttc gagccgccat ctgcgcggtc
      961 tgcctgcttc cgcccactct cttaatgggc gccactctac ccgcgattgc ccgctgggtc
     1021 gagccgagcc gccagggcat ctcttggctg ggattcttct atggcggcaa catcgccggt
     1081 gcggtcttcg gctgcctgct cgcaggtttc tatctcttgc gcgtttacga tatggcgacg
     1141 gcgacatatg ttgccgccgc catcaatctc gcagtcgcat tgatcggcct gttgatcgcc
     1201 gcgaggacgc cgcaccggat cgcggtcgat tctcgtgccg aagcgcctgt ggaacgcgaa
     1261 accagtgtcc ggaccgttta tgcagccatc gcgctatcgg gactttgcgc tcttggagcg
     1321 gaagtcgtgt ggacgcgcat cctgtcgctg cttctcggag cttccgttta tacgttctcg
     1381 atcatcctcg cggttttcct gatcggtctc ggcattggca gcagcgcagg atctttcatt
     1441 tccagaaccg tcaatcccag ggcggctctc ggttactgcc agttgcttct gatgttcgga
     1501 atcacgtgga cggcgtttat ggcttcgcgc gcgctgccgt actggccc
//
LOCUS       DATDHO010000216         3377 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_406489, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000216 DATDHO010000000
VERSION     DATDHO010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406489"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1271)
                     /locus_tag="VIY07_04285"
     CDS             complement(<1..1271)
                     /locus_tag="VIY07_04285"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381005.1"
                     /translation="MDSTPAEFSSSARVPPSFDKTSLDSSELIRTSGLMDRKWWLVIA
                     GCITHAVNTGFSYFGMSAFFPSFEREFGWSRTAISGAFSLARVESGILGPIEGYLTDR
                     VGAQRMLFIGLIICSLGFLSLSWVNSLPMLYIVIVVGIVLGSSLGYNMPISVLIAKVF
                     QERRSLAFGIFRMGPGISGVLVPVVGWMIGLWGWRTAAVASAFVVFLVGFPLAIIIKR
                     IYEQEEAARSVLEGGNPVALRHASSDPEFTLSEALRHKSFWFLSVAMALRHMVTEGVS
                     VHFVILLVDRGWSTEAASGLLGLSALIGAPARIGMGWLGDMVDKRRLVMGLLLALSFS
                     VLLMGYTAVAIVFTPCMIIYSLSYGGLAALQEPIRADYFGTKAFATIQGMSRSVTTAG
                     TFMGPIIAGFFYDLTKSYTIAFAIFAVVSLGS"
     gene            1624..3345
                     /gene="ybaL"
                     /locus_tag="VIY07_04290"
     CDS             1624..3345
                     /gene="ybaL"
                     /locus_tag="VIY07_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaL family putative K(+) efflux transporter"
                     /protein_id="HEY6381006.1"
                     /translation="MPHDVTLITTIAAGLGLALIVGVIAARLKLPPLVGYLIAGIIIG
                     PATPGFVADLELSSQLAEIGVMLLMFGVGLHFTLDDLLAVRRIALPGAIVQIAVATLL
                     GTSVAAFWGWSLAAGVVFGLALSVASTVVLLRALEDRGLLDSVNGRIAVGWLVVEDLV
                     MVLVLVLLPPLAIWLGGNTEVAVEGVGERSLMTTLALTLGRISVFIALMLVVGKRLFP
                     WLLWQIARTGSRELFTLCIIAAAVGIAYGSAELFGLSFALGAFFAGMVMRESPLSYRA
                     AEESLPLRDAFSVLFFVSVGMLFDPNVIIDQPLKLLEVLAIIIFGKSLAAFFLVLLFR
                     YPLNTALTVSASLAQIGEFSFILANLGVSLGILPREGQSLILAGAIISIALNPLVFRA
                     VEPAQAWIRSRSKLAQTLERPDDPLAVLPMTVDLNRLTGQVVLVGYGRVGRRIGEALT
                     ENGISFVVAEENREIVEQLRENGIPAVSGDAADPAVLIQAHIHRARMLVIATPDTLNV
                     RRMIEIARTVNPRIETVVRTHSEEEAGLLEKENTGKVFLGEHELASAMIRHVLVRYAT
                     GNEGHHE"
BASE COUNT          713 a         1006 c          940 g          718 t
ORIGIN      
        1 gacccgaggc taaccacggc gaatatagcg aaagcgatcg tgtagctctt ggtgagatcg
       61 taaaaaaatc cggcgatgat cggccccatg aaggtgcctg cggttgtgac gctccggctc
      121 attccctgaa tcgtggcgaa ggccttcgtg ccaaagtagt cggcgcgaat cggttcctgc
      181 aatgcggcca gcccgccgta ggagagtgaa tagatgatca tgcaaggtgt gaaaacgatc
      241 gccacagccg tatagcccat caacagcacg gaaaagctca gcgctagcaa aagccccatg
      301 accaaccggc gtttgtcgac catatccccc aaccaaccca tcccgatccg agccggcgcg
      361 ccgatgagcg ctgagagccc cagtaatccg ctggccgcct cggtgctcca gccgcggtcc
      421 acgagcagga taacaaaatg cacagagacg ccttcggtga ccatatggcg cagcgccata
      481 gcgaccgaaa ggaaccaaaa cgatttgtgc cgcaaagctt cgcttaaagt aaactctgga
      541 tccgatgacg catgccggag cgctaccgga ttccctcctt ctaaaacgga tctcgccgcc
      601 tcttcctgct cataaatccg tttgatgatg atggcaagtg gaaatccaac caagaaaacc
      661 acgaaagccg acgccacggc cgcggttcgc cagccccaga gtccaatcat ccaacccacc
      721 accgggacca gtacgccgga gattcccggc cccatgcgaa agattccaaa agccaagctg
      781 cgtctttctt gaaacacttt cgcgatgagg acgctgatgg gcatgttgta gcccaggctt
      841 gaacccagta cgatgccaac cacgatcacg atgtaaagca tcggtaacga attgacccag
      901 ctcaacgaca aaaaacccag cgagcagatg ataagtccga tgaacagcat tctttgggcg
      961 cccacgcggt cggtaaggta accttcgatc ggacccaaaa tacccgattc cactcgcgcc
     1021 aacgaaaatg ctcctgagat cgccgtccgg ctccagccga actcgcgctc gaaggacgga
     1081 aagaatgcgc tcatgccgaa ataactgaag ccggtattca ccgcgtgagt gatgcacccc
     1141 gcgataacca gccaccactt gcgatccatc aaaccagatg tccgaattaa ttcgctgctg
     1201 tcaagagaag ttttatcaaa tgaaggcgga acacgcgccg acgagctaaa ctcagcgggc
     1261 gtggaatcca tgccggccga ccaacctgga atattggtct aggcggtgag ttgcggcggt
     1321 cgtaaaaccg ttgtaatttc gttctgcatc gctcaactgc gtgcacatca acaaacgatc
     1381 gcaatcgatt attcaagctg accgctcgac ctgtgttgtc agcaaatcat caatggggtt
     1441 cacgggctcg gcctgaggaa cagctcgatt ccaattcctc agcgcgctgc gccttgttcc
     1501 cgaagcctgg cattcatcgc aacgaggcgc ggctcagact cggctaagat cagataacca
     1561 tcggctaaga aaacacaaat gggccgatca ttcggctcac ggacaaccat agaggatgga
     1621 cacgtgcctc atgacgttac actgatcacc accattgccg ccggcttggg acttgctctt
     1681 atcgtgggcg tcatcgccgc gcgcttgaag ctgccacctt tggtcggtta tctcattgcc
     1741 ggcatcatca tcggcccggc cacgccgggc ttcgtcgccg acctcgaact gtccagccag
     1801 ctggccgaaa tcggtgtgat gctgctgatg ttcggcgtcg gtttgcattt tactcttgac
     1861 gacctgctgg ccgtgcgtcg gatcgccctc cccggcgcga tcgtccagat cgctgttgcg
     1921 accttgcttg gcacgagcgt cgctgctttt tggggctgga gcctggccgc cggcgtcgtg
     1981 ttcggtctcg cgctgtcggt ggcgagcact gtagtgttgc tcagggcact ggaagatcgc
     2041 ggccttctgg actccgtcaa cggccgcatc gcggttggat ggcttgtggt cgaggacctc
     2101 gtgatggtgc tggtgctggt gttgctgccg ccgttggcga tctggttggg cggcaataca
     2161 gaagtcgccg ttgaaggcgt aggggagcgc agtttaatga caacgcttgc attaacccta
     2221 ggccgaattt cggtctttat cgcgctcatg ctggttgtcg gcaagcgtct ctttccctgg
     2281 ttgctctggc aaatcgcgcg caccggctcg cgggaacttt ttaccttgtg catcattgcg
     2341 gccgccgtcg gcatagccta cggctccgcc gagcttttcg gcctctcctt cgcacttggc
     2401 gcttttttcg ccggtatggt catgcgggaa tctcctctaa gctatcgggc cgctgaagag
     2461 tccctgccgt tgagggatgc cttttccgtt ctcttctttg tgtcggtcgg catgttgttc
     2521 gatccgaacg tcatcatcga ccagccgctc aagctattgg aggtcctggc aattattatc
     2581 ttcggcaaat ccctggcggc tttttttctc gtgttactct tccgctaccc gctgaacacg
     2641 gcgcttactg tttctgcgag cctggcccag atcggcgagt tctcctttat cctggcaaac
     2701 ctgggggttt ctttgggaat tctgccaagg gaagggcaga gtctgatctt ggcgggagca
     2761 atcatttcga tcgcgctcaa tcccctggtg ttccgagcgg tcgagcctgc tcaagcctgg
     2821 attcggtccc gctcgaaact cgcccagaca ttggaacgac ccgacgatcc gctcgcagtg
     2881 ctgccgatga ccgttgatct caatcgtctg accggacagg ttgtactggt gggttatggc
     2941 cgcgtcggcc ggcgcatcgg tgaggcattg accgagaatg gtatatcctt tgtcgtagcc
     3001 gaagaaaatc gtgagatcgt cgagcagttg cgagaaaacg gcatcccggc ggtctccggc
     3061 gacgctgccg accccgccgt cttgattcag gcgcatatcc accgtgcgcg catgttggtg
     3121 atcgccactc cggatacgct aaacgtgcgc cgcatgatcg agatcgcgcg aacggttaac
     3181 ccacgcatcg agacggtggt gcgcacccac agcgaagaag aagcggggct cctcgaaaag
     3241 gaaaataccg gcaaggtgtt cctgggcgag cacgagcttg ccagcgccat gatccgccac
     3301 gtgctagtgc gctacgccac tggcaacgaa gggcatcacg agtgacgcag ccagccttgt
     3361 ttctgcgcca cgcgtga
//
LOCUS       DATDHO010000217         3300 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_454098, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000217 DATDHO010000000
VERSION     DATDHO010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3300)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3300)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3300
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454098"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1506)
                     /locus_tag="VIY07_04295"
     CDS             complement(<1..1506)
                     /locus_tag="VIY07_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6381007.1"
                     /translation="MRHFNLSAWAVAHPALILFLIIMFGAAGLLSYRSLGRAEDPSFT
                     IKVVVVTAMWPGATAAEMQAQVADPIEKKLQELPYFDKVTTYTKPAFTAMQVAFKDNT
                     PAREVPELFYQLRKKVADIKDDLPAGIIGPSVNDEYGDVDSILYMLTADGADYAQMKK
                     VAQALRQRLLKVKDVTKVNLYGTQDEKIFVEFSHAKLATLGVTTEQIFQSLARQNAVV
                     SAGIVESSAQRVPLRVTGALDGAKAVAETPVEANGRVFRLGDIATVTHGFADPPEFVV
                     RQKDKPAIGIGVVMAKGANILDLGPAVNSATAEFMAAVPHGFNLEQIADQPAVVEHAV
                     GEFVHSFIEALAIVLFVSFVALGWRTGIVVALSVPLVLAIVFVVMNAMGLDLHRITLG
                     ALIIALGLLVDDAIIAVEMMVVKIEQGWDRVRAASFAWESTAFPMLTGTLVTAAGFLP
                     IGFANSAVGEYAGGIFWVVAIALVASWLVAVVFTPYLGVKLLPALKKLGHRH"
     gene            complement(1547..2641)
                     /locus_tag="VIY07_04300"
     CDS             complement(1547..2641)
                     /locus_tag="VIY07_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY6381008.1"
                     /translation="MSHQAVFPQFIKALALISPLVLAACDPMTAQPAAPVRPVLVTPA
                     HYEAQVSDRSFVGIVRPRIESDLGFRVAGKVSRRLVEVGTRVEVGQPLAVLDEVDLAL
                     QAEQAAAELRAATGVLAQATAAEGRANELRQKGWSTDAQLDQARAAADEARARLNRAE
                     RSVELTKNSLSYATLVADAGGVVTATLIELGQVVAAGQTAIRLARLAEKEVVVAIPET
                     LLTRAKSGEAQVSIWSSPDKRYTARLRELAPSADPATRTYLAKFSLPEAGDEVQLGMT
                     ATLTLSEPASERVARLPLSALFNQGQGPSVYVADEKGALTLRRVSVKSYERDDVLISD
                     GVEEGANVVALGVQKLDSAQKVKIVSSLSF"
BASE COUNT          689 a          994 c          981 g          636 t
ORIGIN      
        1 gtgccggtgg ccgagcttct tgagagccgg cagcagcttg acgccgagat acggcgtgaa
       61 aacgaccgcg accagccacg atgcgacgag ggcgatggcg accacccaga agatgccgcc
      121 ggcatattcg ccgaccgccg aattggcaaa gccgatggga aggaagcccg cagcggtcac
      181 cagcgtcccc gtcaacatgg ggaatgcggt ggattcccag gcaaacgagg ccgcgcgaac
      241 tcggtcccac ccctgctcta tttttacgac catcatctca acggcgatga tcgcgtcatc
      301 gaccagcaaa ccgagggcga taatcaatgc accgagcgta atccggtgga gatcgagccc
      361 catggcattc atgacgacga acacgatcgc cagcaccagc ggaaccgaca atgctacgac
      421 aatgcctgtg cgccaaccca acgcaacgaa gctgacgaac aggacgatcg ccagcgcctc
      481 tatgaaggaa tgcacgaatt cgccaacggc gtgctcgaca acagccggct gatcggcgat
      541 ctgctcaaga ttgaatccgt gcgggactgc cgccatgaat tcggcagtgg cgctgttaac
      601 ggccgggccg aggtcaagaa tattggcgcc tttcgccatc acgacgccga tgccgatggc
      661 cggcttgtct ttctgacgaa ccacgaattc cggaggatcg gcaaaaccgt gcgtgaccgt
      721 cgcaatgtcg ccgagccgaa acacccgccc gttcgcctca accggcgtct cggctacagc
      781 cttggcgcca tcgagcgcgc cggtgacgcg cagcggcacg cgctgcgcgg atgattccac
      841 gatgccggcc gacactactg cgttctgccg ggcaagcgat tgaaatatct gctcggtggt
      901 tacgccgagc gtggcgagct tggcatgcga aaactcgacg aagatttttt cgtcctgcgt
      961 gccgtagaga ttgacctttg tgacatcctt gaccttcagc aggcgctgac gcagcgcctg
     1021 cgccaccttc ttcatctggg cgtagtccgc gccatcggca gtaagcatat aaagaattga
     1081 atcaacgtcg ccatattcgt cgttgactga aggtccgatg atgcctgccg gcagatcgtc
     1141 cttgatatcg gcgactttct tgcgcagttg ataaaaaagc tccggcacct cgcgcgccgg
     1201 cgtgttgtcc ttgaaggcaa cctgcatcgc ggtaaatgcc ggcttggtgt aggtcgtcac
     1261 cttgtcgaaa tagggcagct cctgcagctt cttttcgatc ggatcggcaa cttgtgcctg
     1321 catctcggcg gcggtagccc ccggccacat ggcggtaacg acgacgactt tgatcgtgaa
     1381 tgacggatcc tcggcacggc caagactgcg gtaagacagc aagcccgctg cgccgaacat
     1441 gatgatcagg aacaggatca gggcgggatg agcgactgcc caggctgaaa gattgaagtg
     1501 acgcatggcg atatccttta acgatccgat accgagcgat cggcgctcag aacgagagcg
     1561 acgacacgat tttcactttt tgagcggagt cgagtttctg gacaccaaga gcgacgacgt
     1621 ttgcgccttc ttcaacgcca tcgctgatca acacatcatc gcgttcatac gatttcaccg
     1681 agacgcgcct gagcgtaagg gcgccttttt cgtcggctac gtaaaccgaa ggcccctgcc
     1741 cctggttgaa aagggccgag agcggcagtc gcgccacgcg ctcgcttgcc ggttcggaaa
     1801 gggtcagcgt cgcagtcatt ccaagctgca cttcgtcccc agcctcgggt agcgagaact
     1861 tggcgagata cgtgcgcgtc gccggatcgg ccgagggggc aagctcgcga agcctggcgg
     1921 tgtaacgctt gtccggactg gaccagatcg agacctgggc ttcgcctgat ttggcgcggg
     1981 tcagcaatgt ttcggggatc gcaaccacaa cttctttttc ggcgaggcgg gcgaggcgaa
     2041 tggcggtctg ccccgcggcg acaacctgac caagctcaat caaggttgcg gtcaccacgc
     2101 cgcccgcgtc ggcaactagc gtcgcgtagg acaggctgtt tttcgtaagc tccaccgacc
     2161 tttcggcgcg gttaagccgt gcgcgcgctt cgtctgccgc cgccctcgct tgatcgagct
     2221 gcgcatcggt cgaccaacct ttctgtcgca gttcgtttgc gcgcccttcg gcggcggtcg
     2281 cctgcgcaag cacgccggtc gcggcgcgca gttcggcggc ggcctgctcc gcttgcagcg
     2341 cgaggtctac ttcatcgagc acagccagcg gctggccgac ctcgacacgc gttccaactt
     2401 cgacaagccg cctggacacc tttccagcaa cgcggaagcc gagatcgctc tcgatccgcg
     2461 gacggacgat gcccacgaag cttcggtcgc tgacctgggc ctcgtagtgg gccggcgtca
     2521 ccaggaccgg gcgaaccggg gccgctggct gggcggtcat tgggtcgcaa gccgcgagca
     2581 caagcggcga gatgagagcc aatgctttga taaattgagg gaaaacggcc tgatgagaca
     2641 ttagcgcggc ctccatttgt aactaatgat aactaatcac tgacgaatgt caatatttat
     2701 cagttattat ttagtataag tcaggcggcc ggcgaccgtg cccggagtag ctgattggct
     2761 agattgaagg cgtgcaaatc ggccggcgat ctcggcaccc ggacacgatt gcggttttgg
     2821 agatttttgg cgatttcaga acatcgcccg agcgcccagc gggaacggcc aaattggggt
     2881 cttgcctgac tgatgcgacc cgcgaaggcc gctcccgtcg cgccgttcgc aaactcgccg
     2941 ctacgtcaac acccgaacga ctgtgctagc gattgtcgcg gcattcctga cccggtggcg
     3001 ccatttaaac ctccgtgtct cactgtcaaa caccatacat agctgtttgt tcgcgcgata
     3061 taggaacgat cgactaaagc gatcaaatat gatgacggtg ccactgcggc cacatgtttg
     3121 aatggcggta agtcattacg gcgcagacca aattctccca atccatgtgc gtcaataggt
     3181 acggctttca atggccttca atttccaaat tgagtgccta gctagcgagc cgacagaccg
     3241 acttggcacg tgcgactgat ttcgaacccg ccggttccat gggccgggcg gaggaaggcg
//
LOCUS       DATDHO010000218         4750 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_257938, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000218 DATDHO010000000
VERSION     DATDHO010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_257938"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..167
                     /locus_tag="VIY07_04305"
     CDS             3..167
                     /locus_tag="VIY07_04305"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEY6381009.1"
                     /translation="MERFDAVGQRLDAMSVAIKLVQPALASFYSSLTDEQKARFNILA
                     PSKATTNREG"
     gene            complement(179..346)
                     /locus_tag="VIY07_04310"
     CDS             complement(179..346)
                     /locus_tag="VIY07_04310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381010.1"
                     /translation="MNDYDGSFDHGDAALQYEISDEALEAAASGKGAAAAMSFPNAPT
                     VSILIMCCSNG"
     gene            complement(472..747)
                     /locus_tag="VIY07_04315"
     CDS             complement(472..747)
                     /locus_tag="VIY07_04315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEY6381011.1"
                     /translation="MKDRRTAPRKRVLKGASIVLSDKAPKLDCTVKNISETGAMLQVS
                     TTLGIPASFDIVIEGARRHCHSIWRTDTRIGVAFEPAMSDGSGHGSP"
     gene            complement(1310..2404)
                     /locus_tag="VIY07_04320"
     CDS             complement(1310..2404)
                     /locus_tag="VIY07_04320"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020096494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY6381012.1"
                     /translation="MSISGESFFIIFIILFAGLIVGWLSDMIVQRTRFGLDGIIAMVI
                     VGAVIGGGLTFALRDAIQMAINFPLTKAPKESDISIPPPFERVVLPLAPLRPLLKPVV
                     YRTREEICDTLIEAARNNNLPPHFFIRLLYQESSFRPHAISSAGALGIAQFMPETASD
                     RGLDNPFDPLQAIPASARLLRDMAQKFGNLGLAAAAYNAGPRRIEEWLAKKGPLPQET
                     QAYVKTITSWPAETWTFGAQTGSPAIKVQRQAPCQETVGLMAWDGPDEIPLPPRSPRA
                     LEAAAQAKAIKQAAARAKQNANSQAAKPGEEAKVDGKSDAKPDAKPDAKAGAPMDLNA
                     DPKVDAKPAAKPGTNTNARTSAKTSVVVGN"
     gene            2830..3534
                     /gene="minC"
                     /locus_tag="VIY07_04325"
     CDS             2830..3534
                     /gene="minC"
                     /locus_tag="VIY07_04325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEY6381013.1"
                     /translation="MAVTSTGQSGQSTRFVCRSYMAVVLVPEPPIVEWVADIEQRIKS
                     AGRFLAGSPIVLDLSAVKLSKSAIAHLVAELDRRGVRVMGLENADPDAAGEGLPPLVR
                     SSRGATTNLEVAEAAPAPSPQPKPATLLLDQPIRSGQSIFFPDGDVTVLGSVGSGAEI
                     VAGGSIHIYGALRGRAMAGSNGNARARIFCSRIEAELLAIDGYYLTAESMDQRLRDRA
                     VQAWLEDNELKITALD"
     gene            3563..4378
                     /gene="minD"
                     /locus_tag="VIY07_04330"
     CDS             3563..4378
                     /gene="minD"
                     /locus_tag="VIY07_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006073438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEY6381014.1"
                     /translation="MAKVVVVTSGKGGVGKTTTTAALGAALAQFGQSVVVVDFDVGLR
                     NLDLVMGAERRVVYDFINVTQGVAKLSQALIRDKRNDKLALLPASQTRDKDALTEEGV
                     LRVISSLKQMFDWVICDSPAGIERGATLAMRYADEAVIVTNPEVSSVRDSDRIIGILD
                     AKTVKAERGDQVKKHLLITRYDQARAARGEMLNIDDVLEILSTPLLGIVPESEEVLRA
                     SNLGSPIPFNNPASASARAYFDAARRLTGEDIPMTIPTEKQSLFGKLFGRRAA"
     gene            4375..4683
                     /gene="minE"
                     /locus_tag="VIY07_04335"
     CDS             4375..4683
                     /gene="minE"
                     /locus_tag="VIY07_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032955 - regulation of division septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEY6381015.1"
                     /translation="MNFFGLFKRGGSAPVARDRLQILLAYERTGRGFPDLLFVLREEL
                     MATIKRHVEIDPEGITVQMERGDKVSTLELEIEIPNNVRASPSGGRKKRAPLPAPRPV
                     "
BASE COUNT          964 a         1397 c         1409 g          980 t
ORIGIN      
        1 cgctggaacg atttgacgcg gtcggacagc ggctcgacgc gatgtcggtc gcgatcaagc
       61 tggtgcagcc cgctcttgcc agcttctatt cgagtcttac cgatgagcag aaggcgagat
      121 tcaatatcct ggcgccatcc aaggcaacga cgaaccgaga gggctaaagc gaagcttctt
      181 agccattgct gcaacacata atcaaaatgc tgacggtggg agcattggga aacgacatcg
      241 ccgccgccgc cccttttccg ctcgctgcgg cctcaagcgc ttcgtcggaa atctcgtact
      301 gaagagcagc atcaccgtga tcgaaagatc cgtcgtaatc attcatgccc atacccccga
      361 tctggtcagc gcaagttata agcagcgatc agcttagcag agcgcaatat gcgagcaaac
      421 gcgtcgcgta aggattaagg cgagatagat tgtttgagaa actcgtctat ctcagggaga
      481 cccgtggccg cttccatccg acatcgccgg ttcgaacgct acgcctatcc tcgtatcggt
      541 tcgccatatg gagtggcaat gacgacgtgc gccttcaatg acgatatcga aacttgccgg
      601 gatgccgagc gttgtggaga cttgcagcat ggcgccagtc tccgaaatat ttttgacagt
      661 gcaatcgagc ttgggcgcct tatcgcttaa gacgatagag gcacctttca atacgcgctt
      721 gcgtggtgcg gtgcgcctgt ccttcatggc agccttccgg cttcaacgtc ggcctttcac
      781 gctggttgcg tcgatcaatc cctttgcttc gcgccagtgt taagagacca ccattagatt
      841 cctaaaatct ttgccaactg ctaaaccaaa tcgttgtacg gacgccagcg cggtaagcag
      901 ttgttagtgg caccgatgtc gaatgacatc tttcctgttt tcctgtcaat ccggcgtgaa
      961 aataggggtt atatacgatt cctaaatttg gaactttgcc ggctcgcgcc gatggacgtc
     1021 cacagtcagc gtcggctcag gcgcttacga tttgcccgca cctttcgccg gtacacagct
     1081 gaagccgatt tcgttgcagc cttgattcca cggccagaga gcattttggc cgccgcaacg
     1141 gtttgagctt cccctgccgc gaccgctttc tcagcgagca ttctttgcgc ttcgcgttgt
     1201 gccaaggcgc cgccggaagc gaggcgcatc aaacgcaacg caacaacgac attggcgtcc
     1261 cacccgattt gggcgagcct gaaatacgcg ctccagaggt caagcactat tagtttccga
     1321 ccaccacgga tgtcttggcg ctggtcctgg cgttcgtgtt ggtgccgggt ttggcggccg
     1381 gcttggcgtc caccttggga tcggcattga ggtccattgg ggcgccagcc tttgcatcgg
     1441 gcttggcatc gggtttggca tccgacttgc catcgacctt ggcctcttca ccaggcttcg
     1501 cggcttggct gtttgcattc tgcttggcgc gtgcggcggc ctgttttatc gcttttgcct
     1561 gcgccgctgc ctcaagcgcc cttggactgc gcggcggcaa cggaatctca tcggggccat
     1621 cccaggccat aagcccgacg gtctcctggc agggggcttg tcgctgcact ttgatcgccg
     1681 gactgccggt ctgggcgccg aacgtccacg tttcagccgg ccagctggtg atcgttttga
     1741 cataagcctg cgtttcctgc ggcaacggtc cctttttggc gagccactcc tcgatccgcc
     1801 tcgggccggc attgtaggcg gcagcggcaa ggccaaggtt gccgaatttc tgcgccatgt
     1861 cgcggagcag acgcgccgac gccggtatcg cctgcaaagg atcgaatgga ttgtcgaggc
     1921 ccctgtcgct ggcggtctcg ggcatgaact gcgcgatgcc gagcgcgccc gcggaactga
     1981 tggcatgcgg cctgaaactg ctttcctgat aaaggaggcg aataaagaaa tgcggcggca
     2041 gattgttgtt gcgtgcggcc tcgatcagcg tgtcgcagat ttcctcgcgc gtgcgataga
     2101 caaccggctt gagaagcggg cgaagcggcg ccagcggcag cacgactcgt tcaaagggtg
     2161 gcggaatgga gatgtcactt tccttcggcg ctttggtcaa aggaaaattg attgccatct
     2221 gaatggcgtc ccgcaaagcg aacgtcaatc ctcccccgat aacggcgccg acgatgacca
     2281 tcgcaatgat gccatcaagg ccgaagcgcg ttcgctgcac gatcatgtcg ctcagccagc
     2341 caacgataag accggcgaac agaatgatga aaataatgaa aaaactctca cccgaaatag
     2401 acatagtgcc ctgcccctgg ctgggtcaaa aatgctcgcc cgccagcatg acaaatatga
     2461 ggcattgacg ccggtgattg cccggcccgg aaccgcattt ttagcagaaa aaggcgccac
     2521 acggcacgcc tgcacgttcg gcgacgttca atttgcggtg tccttgtcca attttgatac
     2581 agcgcagata tcacgcccgg gggggtaccg gcggcgacgt caatgcgtcg atcacacgag
     2641 ccaagtcgtg cggggagccg gtttttttat cgttgctacc gggcacggta gaatcgcact
     2701 ccagaaacgt tcgcgactca gatttagatc gggatcgcgt gggtttggaa ctgacatcct
     2761 caagaggcca cggatgacgt tgctacgaga aaagcggcgc gatgattcgt gcccagtcat
     2821 gaactggaaa tggccgtgac gtcgactggt caatcgggcc aatcgacccg tttcgtctgc
     2881 cgatcctaca tggctgtggt gctggtgccg gaaccgccaa ttgtcgaatg ggtcgccgac
     2941 atcgaacaaa ggattaagag cgccggacgc tttcttgccg gctcgcccat cgtgctcgac
     3001 ctgtccgcgg taaagctcag caaatccgcg atcgcgcatc tggtggctga acttgatcgc
     3061 cgcggcgtcc gcgtcatggg cctcgagaat gccgatccgg acgcggcagg tgaaggcctt
     3121 ccgcccttgg tgcgttccag ccgcggcgcc accacaaacc tcgaggttgc cgaggccgcc
     3181 ccagccccga gcccccagcc caagcccgcc acgcttctgc tggaccagcc gatacgctcg
     3241 ggacaatcga tattttttcc cgatggcgac gtaacagtgc tcggctccgt cggctctggt
     3301 gctgaaatcg tggcgggcgg gtcaatccac atttatggcg cattgcgcgg tcgcgcgatg
     3361 gcaggatcga acgggaatgc gcgcgcccgg attttctgca gcaggatcga agccgagctt
     3421 ctggcgatcg acggatatta cttgaccgcg gagtcgatgg atcagcgcct gcgcgatcgc
     3481 gcggttcagg cgtggctcga agacaatgag ctgaaaatca ctgcgttgga ctagactcac
     3541 acaatcccag gagatgcaga caatggcgaa agtcgtcgta gttacttccg gaaagggcgg
     3601 cgtcgggaag acaacgacaa ctgcggctct aggcgcggcg ctcgcgcaat ttggacagag
     3661 tgtcgtcgtt gtcgatttcg acgttggcct gcgaaacctg gacctggtga tgggcgccga
     3721 aagacgggtg gtctacgatt ttatcaacgt aacgcagggc gtggccaagc tttcgcaagc
     3781 gcttatccgc gacaagcgga acgacaagct cgcgctcctt cccgcctcgc agacccgcga
     3841 caaagatgct cttactgaag agggtgttct gcgcgtgatc agctcgctca aacagatgtt
     3901 cgactgggtc atctgcgata gcccagcggg catcgagcgt ggcgccacgc ttgctatgcg
     3961 ctacgcggac gaagccgtca ttgtgacgaa ccccgaagta tcgtcggtgc gtgattccga
     4021 ccgcattatc ggcattctcg acgccaaaac ggtaaaggcc gagcgcggcg accaggtcaa
     4081 aaagcacctg ctcatcacgc gatacgacca ggcgcgcgcc gcgcgcggcg agatgctcaa
     4141 tatcgacgat gtgctggaga tcctgtcgac gccgctcttg ggaatcgtgc cggaaagcga
     4201 ggaagtgctt cgcgcttcca accttggctc gccgataccg ttcaacaacc ccgccagcgc
     4261 gtcggcgagg gcgtatttcg acgccgcccg ccgcctcacg ggcgaagaca ttccgatgac
     4321 gattccaacc gagaaacaga gcttgttcgg caagctgttt gggcggagag cagcatgaac
     4381 tttttcggcc tgttcaaacg cggggggtcg gcgcctgtag cgcgtgatcg tctccagatt
     4441 ctgctcgcct atgagcgcac cgggcgcggc tttcccgacc ttctcttcgt gctgagagaa
     4501 gaactcatgg ctacgatcaa gcggcatgtt gaaatcgatc ccgagggcat caccgtgcag
     4561 atggagcgcg gtgataaggt ttccactctc gaactcgaga tcgaaattcc gaataacgtt
     4621 cgcgcgtctc caagtggagg gcggaaaaag cgggcgcccc tgcccgcacc gcgcccggtt
     4681 tagagatcgc ggtccgcctc agcccgggca ctgcttccag taagcgctaa gcgcgtggcg
     4741 gccgacgccg
//
LOCUS       DATDHO010000219         2206 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_9944, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000219 DATDHO010000000
VERSION     DATDHO010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9944"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..982
                     /locus_tag="VIY07_04340"
     CDS             <1..982
                     /locus_tag="VIY07_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY6381016.1"
                     /translation="GKQTIEDTGPLTKKRMETVDDETSNAAIDFIKRQVQANRPFFVW
                     WNGTRMHLYTHVRPEFKGRSGLSEYMDGMLEHDGHVGNLLKTLDDLGIANNTVVIYGT
                     DNGVHMNSWPDGGMTPFRSEKNTNWEGAYRVPAMIRWPGRIRPGQATNELFSALDWFP
                     TLLAAAGEPDIKNKLLTGYGSMGKTFKVHLDGYNQLPLLTGQQERSARKEFFYINDDA
                     QLVAMRYENWKMVFCEQRAQGTLRIWAEPFTCLRLPKLFNLRLDPYERSDVTSNTYYD
                     WAIQRAFMIVTSQALVQQFVATFKDFPPRQKPSSFSVDEVLAQMERSHGQ"
     gene            1157..1426
                     /locus_tag="VIY07_04345"
     CDS             1157..1426
                     /locus_tag="VIY07_04345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381017.1"
                     /translation="MTPMESGTTDLHRRAYEIAWREFSSLCESMTPDEKGAGPDRLHW
                     FIGVMIETGERDALKIAKASVGMLRQHEQIARSKARVFADSVSQS"
     gene            1688..>2206
                     /locus_tag="VIY07_04350"
     CDS             1688..>2206
                     /locus_tag="VIY07_04350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381018.1"
                     /translation="MQFVSERNARQQPPRKIDSRFKSIAALYRSLGECVVRPPQQCVG
                     VRWDYAFFQMLIETNYLTFLRTDGASASVLPADNNFAGVGAAVPGRAGERFNDVTAGV
                     LAHLQHVLMYSTTRIPEPVAKRTRQVQDDVQSSMRRLQRPITFSDLARVWTGTNKDRY
                     GAEIQLMAEKYAS"
BASE COUNT          483 a          651 c          653 g          419 t
ORIGIN      
        1 cggcaagcag accattgagg acaccggccc cctcaccaaa aaacgaatgg agacggttga
       61 cgacgagacg tccaacgcgg cgatcgactt catcaagcga caggtccagg ccaacagacc
      121 gttcttcgtc tggtggaacg ggacgcgcat gcatctctac acccatgtgc ggccggaatt
      181 taagggacgc agcggtctca gcgaatacat ggacggcatg ctcgaacacg acggccacgt
      241 cggtaacctc cttaagacgc ttgacgatct cggcatcgcc aacaacaccg ttgtcatcta
      301 tggcaccgac aacggcgtgc acatgaactc gtggccggac ggcggcatga cgccgttccg
      361 cagcgagaag aataccaact gggaaggtgc ctatcgcgtc cctgcgatga tccgctggcc
      421 gggacgcatc aggccggggc aggccacaaa tgaactcttc tccgcgcttg attggttccc
      481 aacgctgcta gcggccgccg gcgagccgga catcaagaac aagctcctca ccggctatgg
      541 ctctatgggc aagacgttca aggtgcacct cgacggctac aaccagttgc cattgttgac
      601 cgggcagcag gagaggtccg cacgcaagga attcttctac atcaacgacg acgcccagct
      661 cgtggcaatg cgctacgaga actggaaaat ggtattctgc gagcagcgcg ctcaaggcac
      721 gctgcggatc tgggcagagc cattcacctg cctgcggctg ccaaagctgt ttaacctccg
      781 tctggatcct tacgagcgat cggacgtcac gtccaacacc tattacgatt gggcgatcca
      841 gcgggcattc atgatcgtta cgtcccaagc gctggtacag caatttgtcg cgacgtttaa
      901 ggactttcca ccgcggcaaa agccttcgag cttcagcgtc gacgaagtct tggcgcaaat
      961 ggagcggtcg cacggccagt gacgactgca aaaacgaggc ggccggcgaa aatgccggcc
     1021 gtcccttttt gtccggtatt ggcacttagc ggactttcat ccgacaaggc gacggcacgc
     1081 tggcatgcgc agtcacgccc atgcaggaac tttccgcgcc cccggaactt ggaaagagca
     1141 aaccgggagg tgtgccatga ccccaatgga aagtggtacg accgatctgc atcgccgcgc
     1201 ctatgaaatt gcctggcgtg aattctcgtc actctgcgag tccatgacac cggatgaaaa
     1261 aggggccggg cctgaccggc tgcattggtt tatcggggtg atgattgaaa caggcgaacg
     1321 cgacgcgctg aaaattgcaa aggcatcagt cggcatgttg cgccagcacg aacagatcgc
     1381 gcggtcgaag gcccgggtat tcgcggacag cgtttcgcaa tcctgatcgg gcccaaatcg
     1441 atttgttgga aagaaagtcc ggccgggcgt tctcgccggc gtttgcccgt ttttgtctgc
     1501 gtgaccgcgc aaaattaacg cgaatcatgt atccgccctg tccatgggac ggggcttgat
     1561 tcgggcgagg atgcttctac ctgcgctgct gctcttggcg tgcgcttgtg cgcaagcggg
     1621 cgagctgccg ccgatcatcg ccaccgcgga taacgcggtc cccagctgcg ttaagccgga
     1681 ggctctgatg cagttcgtat cggagcgcaa cgcgcgccag cagcctccgc gcaaaattga
     1741 ctcgcgtttc aaaagtatcg cagcgcttta tcgatcgctc ggcgagtgcg tggtgcggcc
     1801 accgcaacaa tgcgtcggag tccgctggga ctatgctttc tttcagatgc tgatcgaaac
     1861 gaactatctc acgtttcttc gaacggatgg cgcgtcggca agcgttctgc cagccgacaa
     1921 taatttcgct ggtgtgggcg ctgccgttcc cggccgggcg ggagaacgct tcaacgacgt
     1981 aaccgcaggc gtactggcgc accttcagca cgtattgatg tattcgacca cgcgcattcc
     2041 tgaaccggtg gcaaagcgca cgcgtcaggt tcaggacgac gtgcagagct caatgcggcg
     2101 gcttcaacgt ccgatcacct tctccgatct tgcacgcgta tggaccggga cgaacaagga
     2161 ccgatacgga gcggaaattc agctgatggc ggaaaagtat gcgagc
//
LOCUS       DATDHO010000220         2744 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_258008, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000220 DATDHO010000000
VERSION     DATDHO010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258008"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="VIY07_04355"
     CDS             complement(<1..273)
                     /locus_tag="VIY07_04355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEY6381019.1"
                     /translation="MATPNAVGKITQVIGAVVDVQFEDHLPAILNALETKNGGNRLVL
                     EVAQHLGESTVRTVAMDASEGLVRGQEVTDTGQPIAVPVGNETLGRI"
     gene            complement(294..1163)
                     /locus_tag="VIY07_04360"
     CDS             complement(294..1163)
                     /locus_tag="VIY07_04360"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEY6381020.1"
                     /translation="MPSLKDMRVRIAATKATQKITKAMQMVAASKLRRAQAAAEAARP
                     YAERMSKVLTSIAAAVAGSDTAPRLLAGTGNDKVHLLVVCTAERGLCGPFNSSIVRLA
                     RDRANALIADGKEVKILCVGRKGYEQLRRLFGKQIIETIELRGVRTIGFEQADMIAKK
                     IQALFDQGAFDVATLFFSRFKSVIAQIPTAQQIIPPVFEQDETASAVYEYEPEEEEIL
                     AELLPRNLSVQVFRALLENAASEQGARMSAMDNATRNAGEMIRKQTLMYNRTRQAMIT
                     KELIEIISGAEAL"
     gene            complement(1218..>2744)
                     /gene="atpA"
                     /locus_tag="VIY07_04365"
     CDS             complement(1218..>2744)
                     /gene="atpA"
                     /locus_tag="VIY07_04365"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEY6381021.1"
                     /translation="DIRAAEISAILKEQIKNFGQEAEVSEVGQVLSVGDGIARVYGLD
                     NVQAGEMVEFENGVRGMALNLEIDNVGIVIFGNDREIKEGQTVKRTNAIVDVPIGKGL
                     LGRVVDALGNPIDGKGPIKAERRARVDVKAPGIIPRKSVHEPMATGLKAIDSLIPIGR
                     GQRELIIGDRQTGKTAIALDTILNQKPLNAQPDEKIKLYCVYVAVGQKRSTVAQFVKV
                     LEEQGALDYSIIVAATASDPAPMQYLAPFSGCTMGEYFRDNGMHAVIIYDDLSKQAVA
                     YRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDENKGGSLTALPVIETQANDVS
                     AYIPTNVISITDGQIFLETDLFYQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGRIKGE
                     LAQYREMAAFAQFGSDLDATTQRLLNRGARLTELLKQPQFSPLKMEEQVCVIYAGVNG
                     YLDPLDVSRVRPFENGLLTLLRTKHGGLLDGIRKSGDLSDADAGKLKDVVNEYARTFA
                     "
BASE COUNT          505 a          821 c          814 g          604 t
ORIGIN      
        1 gatgcggccg agcgtttcgt tgccgacagg cactgcaatc ggctgaccgg tgtcggtgac
       61 ttcctggccg cgtaccagcc cttcggatgc atccatcgcg accgtgcgga ccgtcgactc
      121 gccgagatgc tgcgcgactt ccagcaccag acggtttccg ccgttcttcg tctcaagtgc
      181 gttcaggatc gccggcagat gatcctcgaa ctgcacgtcg acgactgcgc cgatgacttg
      241 cgtaattttt ccgactgcat tgggtgtggc cataattgtc ctcgttacgg aaactagagc
      301 gcctcggcgc ccgagatgat ctcgatcagt tccttcgtga tcatcgcctg gcgggtgcgg
      361 ttgtacatga gcgtttgctt gcggatcatt tccccggcat tgcgagtggc gttgtccatg
      421 gcgctcatac gcgcgccctg ctccgaggca gcgttttcca gaagtgcccg aaatacttga
      481 accgacagat tgcgcggcag caattcggcc aggatttcct cttcctcggg ctcatattcg
      541 taaaccgcgg aagcagtttc atcttgttca aagacgggcg ggatgatctg ctgcgcggtc
      601 ggaatttgcg caatcaccga tttgaaccgg gagaagaaca gcgttgcgac gtcaaacgcc
      661 ccctggtcga acagggcctg gatcttcttg gcaatcatgt cggcctgctc aaagccgatg
      721 gtgcgcacgc cgcgcagctc gatggtttca ataatctgtt ttccgaacaa tcggcgcagc
      781 tgttcatatc ctttgcggcc gacgcagagg atcttcactt ccttgccgtc ggcgatcagg
      841 gcgttcgccc tgtcgcgggc taatcgcacg atcgaggaat tgaaggggcc gcaaagcccg
      901 cgctcggcgg tgcaaactac caacagatgc accttgtcgt tgcccgtacc ggcaaggagt
      961 cggggagcgg tatcgctgcc ggcaacagct gcggcaatcg aggtcaggac cttgctcatc
     1021 cgttccgcat aaggacgagc ggcctccgcc gcggcctgtg cgcgtcgcag ctttgaagcc
     1081 gcaaccatct gcatggcttt ggtgatcttc tgcgtcgcct tggtcgcggc gatgcgaaca
     1141 cgcatgtcct tgaggctggg catgtctttg acgtctctat cctttttgtc atgcccggtc
     1201 gggcatgacg tcttagatta cgcaaaagtc cgggcgtact cgttgacaac gtccttgagc
     1261 ttgcccgcat cggcgtccga aagatcgccg ctctttctga tgccgtcgag gaggcccccg
     1321 tgcttcgtcc gcaacaatgt caaaaggccg ttctcgaatg gccgcacgcg cgaaacgtcg
     1381 agcgggtcaa gatagccgtt cacgcctgcg tagatcacgc agacctgctc ttccatcttc
     1441 aaaggcgaga actggggctg cttgagaagt tcggtcaatc gcgcgccgcg attgagcagg
     1501 cgctgcgtcg tggcatcgag gtccgatccg aactgggcga aggcagccat ttcgcggtac
     1561 tgcgcgagct ctcccttgat gcggcccgcg acctttttca tcgctttggt ctgcgcggag
     1621 gagcccacgc gcgacaccga cagacccacg ttcaccgcag gacgaatgcc ttgatagaag
     1681 aggtcggtct ccagaaagat ctggccgtcg gtaatcgaaa tcacgttggt cggaatgtac
     1741 gccgacacgt cattggcctg cgtttcgatc accggcagag cggtgagaga accacccttg
     1801 ttttcatcat tcatcttcgc ggcgcgctcc agcaggcgtg agtgcaggta aaacacgtcg
     1861 ccaggatagg cttcgcgtcc cggcggacga cgaagcagca gcgacatttg ccgatatgca
     1921 acagcttgtt tcgacaaatc gtcatagatg atgacggcat gcatgccgtt gtcgcggaaa
     1981 tattcgccca tggtgcagcc gctgaacggc gccaggtact gcatgggcgc cggatcggag
     2041 gcggttgctg caacgataat ggaatagtcg agcgcgccct gctcctcgag gaccttgacg
     2101 aattgcgcga cggtcgaacg cttttgtccg accgcgacat agacgcagta gagcttgatc
     2161 ttctcgtcgg gctgtgcgtt gagaggcttc tgattgagga tcgtgtcgag cgcaatcgcg
     2221 gtcttgccgg tctgccggtc gccgatgatc agctcgcgct gaccccgacc gatcggaatc
     2281 agcgagtcga tagccttcag accggtcgcc atgggctcgt gcactgattt gcgcggaatg
     2341 atgccggggg ccttcacgtc caccctggcg cgcctctcag ccttgatcgg acccttgccg
     2401 tcgatgggat tgccaagcgc atcgacgact cggccgagca gccccttgcc gatcggcacg
     2461 tcgacgatcg cattggtgcg cttgacggtc tggccttcct tgatctctcg gtcattgccg
     2521 aagatgacga tgccgacgtt gtcaatttcg aggttgagcg ccattccacg gacgccattc
     2581 tcgaactcga ccatctcgcc agcctgcaca ttatcgaggc cgtatacgcg ggcgattccg
     2641 tcgccgacgg agagcacctg cccgacttcg gagacttccg cctcctggcc gaaattcttg
     2701 atctgctctt tgaggatggc ggaaatttct gcggcacgga tatc
//
LOCUS       DATDHO010000221         1638 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_208136, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000221 DATDHO010000000
VERSION     DATDHO010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1638
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208136"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..133
                     /locus_tag="VIY07_04370"
     CDS             <1..133
                     /locus_tag="VIY07_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010661101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] synthase III
                     C-terminal domain-containing protein"
                     /protein_id="HEY6381022.1"
                     /translation="TSAASIPLALADAVADRRIKRGNLILLEAMGGGFTWGSALLRW"
     gene            276..587
                     /locus_tag="VIY07_04375"
     CDS             276..587
                     /locus_tag="VIY07_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEY6381023.1"
                     /translation="MSGKTVTRADLCEAVYQKVGLSRTESAALVELVLKEITDCLERG
                     ETVKLSSFGSFVVRKKGQRIGRNPKTGKEVPISPRRVMVFKPSAILKQRINNGSAEQQ
                     A"
     gene            642..1322
                     /locus_tag="VIY07_04380"
     CDS             642..1322
                     /locus_tag="VIY07_04380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEY6381024.1"
                     /translation="MDNKAPDAFRTISEVADELDLPQHVLRFWESRFHEIKPMKRGGG
                     RRYYRPDDIDLLRGIRHLLYGEGYTIRGVQRILREQGPKFVQVVWQEGAPQPPHGRVE
                     EEEFVEEAVMADDVPADEERGLRGRLSSLIGRDLGDRDDEARVEPPLTGAPVPRVDST
                     DRAIHSVSASDSPNAAPDSVSAAPRQPSSTAAAGGLGREDLRKLHAALHELAECRKLI
                     DAVVTRPH"
     gene            1387..>1638
                     /locus_tag="VIY07_04385"
     CDS             1387..>1638
                     /locus_tag="VIY07_04385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381025.1"
                     /translation="MLEPILGRLRAMRGLAKAALVAIAIVAGAITSAPAQQTVPTGRV
                     PPVVTHNITPLGWYVIGSIGCAAVSPMIATAILGRELTLA"
BASE COUNT          313 a          478 c          517 g          330 t
ORIGIN      
        1 cacgtctgcg gcctcaatcc ctctggctct ggcagacgcc gtcgctgatc ggcggatcaa
       61 gcgcggcaat ctcatccttc tggaggctat gggcggcggc tttacctggg gatccgcgct
      121 cttgcggtgg taacagcttc cggatggcgt gttgctcgcg cgcaatggat ggagggtatc
      181 ttttcacaat ctggagtggc cccgttgacc ccttttggcc atgctaatat cgtcgataat
      241 tcagcgggat accttcgccg ggggcagggc aggcgatgag cggaaaaact gttacgcgag
      301 ccgacttgtg tgaggcggtg tatcaaaaag tcggtttgtc tcggacggaa tcggcggcgc
      361 tcgtagaatt ggtgctcaag gagatcaccg actgccttga gcgcggagaa accgtcaaac
      421 tttcgtcttt tggatcattt gtagtacgaa agaagggcca gcgaatcggc cgtaacccaa
      481 agaccggtaa ggaagtacca atctcgccgc ggcgtgtcat ggtgttcaag ccgtcggcga
      541 tcctcaagca acgcattaac aacggcagcg ctgagcaaca agcgtaagcc gatctcggcg
      601 gcgtaaccgc gtttggatca actcggaagg agtggcccgc tttggacaac aaggcgccgg
      661 acgcatttcg caccatcagt gaggtggcgg acgaactcga cctaccgcag cacgttctgc
      721 gcttctggga gagccgcttt cacgaaatca aaccgatgaa gcgcggcggc ggccgtcgct
      781 attatcgccc cgacgatatc gatttgctgc gtggcattcg ccatcttctg tatggcgaag
      841 gttacaccat tcgcggcgtg caacgcatct tgcgcgagca aggtccgaag ttcgttcagg
      901 ttgtttggca ggaaggcgcg ccgcagccgc cgcatggaag agtcgaagaa gaagagtttg
      961 tcgaggaggc tgtgatggca gacgatgttc cagcggacga agagcgtggc ttgcggggcc
     1021 gcctgtcctc acttatcggt cgggacctcg gggatcggga tgacgaagcc cgtgtcgaac
     1081 cgcctctcac cggcgcgcca gttccccgcg tcgattcgac cgatcgcgcc atccacagtg
     1141 tttccgcgtc cgattcacct aacgcggcgc cggattcagt ttcggccgcg ccgcgtcaac
     1201 cgtcttcgac ggctgccgct ggaggcctcg gtcgcgagga cctccgcaag ctgcacgcgg
     1261 cgctgcatga gctggcggaa tgccgcaagc tgatcgacgc agtggtgacg cgaccgcact
     1321 agactttcag caacttcccg tcacttgaac cgtgcgggca tggtgcgcga ccaatggccg
     1381 tgtacaatgc ttgagcccat tctggggagg ctgagggcaa tgcgggggct tgcgaaagcc
     1441 gcgttggttg caatcgcgat tgtggctggc gctatcacat ccgcgccggc ccagcagact
     1501 gtgcccaccg gtcgcgtccc acccgttgta acccataaca tcacgccgct cggctggtat
     1561 gtcataggct cgatcgggtg tgcggcggtc tctccgatga tcgcaactgc gatcctcggc
     1621 cgagaactga cgctcgct
//
LOCUS       DATDHO010000222         3810 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_109364, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000222 DATDHO010000000
VERSION     DATDHO010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3810
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109364"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /gene="flgB"
                     /locus_tag="VIY07_04390"
     CDS             complement(<1..308)
                     /gene="flgB"
                     /locus_tag="VIY07_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="with FlgF and C makes up the proximal portion of
                     the flagellar basal body rod; Bradyrhizobium has one thick
                     flagellum and several thin flagella; the protein in this
                     cluster is associated with the thick flagellum; Derived by
                     automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HEY6381026.1"
                     /translation="MAIADIPILPMFRARLDWSPARQRVLAESVANSDTPRFQARDLA
                     PLTFDESPLAASGGLTSVSLARTETGHIEGVGLSQSPFRNGSSRIFEVRPTGNAVNLE
                     "
     gene            577..1527
                     /locus_tag="VIY07_04395"
     CDS             577..1527
                     /locus_tag="VIY07_04395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliO"
                     /protein_id="HEY6381027.1"
                     /translation="MFETLFGSEMPLAARFFIAFLIVLALIGLTAWLVRRFGASRLGT
                     TARGRQPRLAVIDAATVDGRRRLVLIRRDNIEHLLMIGGPTDLVVEPNIVRAMGREIR
                     EPARVGPAETGQRHAPAGENGWPLQPVGEPTAPASRPYRPAAATEEPWLPPEPGGRAR
                     PSDSLTGLAAELSNRLNPPDHAPPATRMEPTPRASSQTAESATAHGDHNLAEMAQQLE
                     AALRRSPAPEGRPPVTDPLAAPGGASPGGKMGDTGARPAVRDFKGRVEPKFEPKEPKA
                     EHKFEPKPEAREPAATPGKNLYENLEEEMASLLGRPPGKS"
     gene            1584..2282
                     /gene="fliP"
                     /locus_tag="VIY07_04400"
     CDS             1584..2282
                     /gene="fliP"
                     /locus_tag="VIY07_04400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665786.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0001539 - cilium or flagellum-dependent
                     cell motility [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
                     /protein_id="HEY6381028.1"
                     /translation="MLLAAMATAAAQDISVNFGQGNGLTERVIQMIALLTVLSLAPSI
                     LVMMTSFTRIVVVLSLLRTALGTATAPPNAVIVSLALFLTAFVMGPALQRAYDTGIRP
                     LVANEITAEQAFERGSQPLRAFMQKNVREKDLKLFADMAKEAEPAKPEDLSLRVLVPA
                     FMISELKRAFEIGFLLFLPFLIIDLVVASVLMSMGMMMLPPVVVSLPFKLIFFVLVDG
                     WSLVAGSLIQSYGA"
     gene            complement(2286..3086)
                     /locus_tag="VIY07_04405"
     CDS             complement(2286..3086)
                     /locus_tag="VIY07_04405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6381029.1"
                     /translation="MQAILITGAAGDVGTRLRRLLKGVYPRIRISDIREPSELGSDEE
                     FVAADLADYGQVEKITSGIDGIVHLGGFSVEGAWETIHRSNIVGCYNLFEAAYRAGVK
                     RIVFASSNHAVGFYPRERKIGVDVTVRPDSRYGVSKAFGEALGALYADKHGLGVTCIR
                     IGNVNDQPLDKRRLSIWIKPEDLVQLVRIGLEHPDIRFEIFYGASDNKATWWDNSNAQ
                     RFGYRPQGRAEDFRAFAMAEQAKLSADPIAERYQGGPFCSDEYDAGGK"
     gene            complement(3121..>3810)
                     /locus_tag="VIY07_04410"
     CDS             complement(3121..>3810)
                     /locus_tag="VIY07_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019856607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HEY6381030.1"
                     /translation="RLTAELVARLTADITSGKLPPGSRLPTEQEMIAATGVSRTVIRE
                     AVAALRADRLVVTRQGVGAFVANQVRRPFRVDFDERSPLREVLNVMELRTGVEIEAAG
                     LAAERASPAQLKKIADKFNAIQAAIDSGESAVDEDFAFHCAIATATGNPQFTRFLEYL
                     GSFIIPRRSIWNGPSSAARRVQLDTFQKEHEQILQAIQAGAVSQARAAMQRHLLNSRQ
                     RYQKLAAEHTE"
BASE COUNT          701 a         1176 c         1181 g          752 t
ORIGIN      
        1 tcctcgaggt tcacggcgtt gccggtcggc cgcacctcga aaatgcgcga gcttccgttt
       61 cggaatggcg actggctcaa accgactcct tcgatgtgac cggtttccgt acgcgcaagt
      121 gaaacagagg tgaggccgcc ggatgcagcg agcggcgact cgtcgaacgt cagcggagcg
      181 agatcgcgcg cctggaaacg aggcgtgtcg gaattggcta cgctttcagc caatacgcgc
      241 tgtcgcgccg gcgaccaatc aaggcgtgcg cggaacatgg gcagtattgg aatgtcagca
      301 atggccatcg ccagccccca gacggcgtct ccccaactcc cccaccaggc agactttgcc
      361 ggggttatgg ttaatggctg gtaaaaaggt ggtggcggaa caagttacct ttggacaaaa
      421 gccgatgaaa agcgtcgaaa ctggccggtg gccgcaaatt gccactttat ttgttaatgc
      481 tctgttagta ttcaggccgg caaattgtgc cgggcgcatt aaccattcgg gcgattctcc
      541 cgccatgagc cgcagcacga ggaacggagc gctttgatgt tcgagaccct cttcggctcg
      601 gagatgccgc tggctgcccg atttttcatt gcctttctca ttgtgctggc actgatcggg
      661 ctgacggcct ggttggttcg ccgctttggc gcgagtcgtc tcgggacgac cgcgcgtgga
      721 cgccagccgc gtttggccgt gatcgatgca gcgacagttg atgggcgtcg tcgcctggtg
      781 ttgatccgcc gcgacaatat cgagcatctt ctgatgattg gcggcccaac cgatctcgtg
      841 gtcgagccca atatcgtccg tgcaatggga cgcgagatcc gcgaaccggc ccgcgtcggt
      901 cctgctgaaa ccggccagcg ccacgcgcca gcaggagaaa acggttggcc gctccagccg
      961 gtcggcgagc caaccgctcc ggcatctcgt ccctatcgcc ccgccgccgc aaccgaagag
     1021 ccctggctcc cgcctgaacc gggtggacgc gcgcgaccga gtgatagcct taccggcctt
     1081 gccgccgaat tatcgaaccg cctcaacccg cccgatcatg cgccccctgc cacacgcatg
     1141 gagccaacgc ctcgcgcgtc atcacagacc gccgaatccg caacagcgca cggcgatcat
     1201 aaccttgcgg aaatggcaca acagcttgaa gccgcgctgc ggcgctcacc cgcccccgaa
     1261 ggcaggccgc cagtcaccga tccgctggcc gcgccgggag gcgcatcgcc aggcggcaag
     1321 atgggcgaca ccggcgcgcg gcccgcggtg cgcgatttca aggggcgcgt tgaaccgaaa
     1381 ttcgagccaa aagagccgaa ggccgagcac aagtttgagc ccaagccgga agcgcgtgaa
     1441 ccggcggcaa cgccgggaaa gaatctctac gagaatctcg aagaggagat ggccagcttg
     1501 cttggccgtc cgccgggaaa atcgtgacag ctgcttccga ccgccgtgtc cgtctggtga
     1561 cggtggcggt cggggtagcc gggatgctcc tcgcggcgat ggcgacagcc gccgcacagg
     1621 atatcagcgt caacttcgga caaggcaacg ggctgaccga gcgcgtgatc cagatgatcg
     1681 cgctgctcac cgtgctgtcg ctggcgcctt ccatcctggt catgatgacc tcgttcacgc
     1741 gcatcgtggt ggtgctgtcg ctgctgcgca cggcgctcgg taccgcgacc gcgccgccga
     1801 atgccgtgat cgtgtcgctg gcactgtttc tgaccgcatt cgtgatgggg ccggcgttgc
     1861 aacgcgctta cgacaccggc atcaggcctc tggtcgccaa cgagatcacc gccgagcagg
     1921 catttgaacg cggctcgcag cctttgcgcg ccttcatgca aaagaatgtg cgagagaagg
     1981 atctgaagct gttcgccgac atggcaaaag aggcagagcc cgccaagccc gaggatctgt
     2041 cgctgcgcgt gctggtgccg gcattcatga tttccgaact caaacgcgct tttgaaatcg
     2101 ggtttcttct gttcctgcca tttctgatca tcgaccttgt tgtggcgtcg gtgctcatgt
     2161 cgatgggcat gatgatgttg ccacccgtcg tggtatcgct gccgttcaag ctgatctttt
     2221 tcgtgctggt tgacggctgg agcctcgttg cgggctcgct gatccaaagc tacggcgcct
     2281 gatccttact tgccacctgc atcgtattcg tccgagcaga agggcccgcc ttgataacgt
     2341 tccgcgatcg ggtcggctga aagcttcgcc tgctcggcca ttgcaaaggc gcgaaagtct
     2401 tccgccctgc cctgcgggcg gtagccgaag cgttgggcgt tgctgttgtc ccaccaggtc
     2461 gctttgttgt cggacgcgcc gtaaaaaatc tcgaaccgga tatcgggatg ctcaagcccg
     2521 atgcgaacaa gctgcacgag gtcttccggt ttgatccaga tcgatagccg tcgtttgtcg
     2581 aggggttggt cattgacatt gccgatgcgg atgcaggtta cccctaaccc gtgcttgtcc
     2641 gcgtaaagcg cgccgagcgc ctcaccgaac gctttgctta ctccatagcg gctgtcggga
     2701 cgaacagtta cgtccactcc aatcttccgt tcacgtggat aaaatccgac ggcatgattg
     2761 gaggacgcaa acacaatcct cttaacgccg gcacgatatg cggcttcgaa cagattatag
     2821 cagccgacga tgttggatcg gtggatcgtc tcccaggctc cttccacgga aaatccccca
     2881 aggtgcacga tgccgtcgat accggacgtg attttctcga cctggccata gtccgcgaga
     2941 tcggcggcga caaattcttc gtcgctgcca agctccgagg gctcgcggat gtcgctgatc
     3001 cggatgcgcg ggtaaactcc cttgagcaat ctgcgcagcc gcgtgcccac gtcgccagcc
     3061 gcaccggtaa tcaaaattgc ttgcatcact ctctcttgcg ggaatcgttg cggggctagt
     3121 ctattccgtg tgctcggcgg cgagcttctg gtagcgctga cggctgttga gcagatggcg
     3181 ctgcattgct gcgcgcgcct gtgagacggc gccggcctgg attgcctgca ggatctgctc
     3241 gtgctccttt tgaaaggtgt caagctggac acgacgcgcg gcggaggacg ggccgttcca
     3301 gatcgaccgg cgcggtataa tgaagctgcc aagatactcc aggaagcgtg tgaactgcgg
     3361 gttcccggtg gcagtcgcga tcgcgcaatg aaacgcaaaa tcctcgtcga cggcgctctc
     3421 gccgctgtcg attgcggcct ggatggcgtt gaatttgtcg gcgatctttt tgagttgcgc
     3481 cggtgaagcg cgctcagcag cgagcccggc agcctcgatc tcaacgcctg tgcgcagctc
     3541 catgacattg agcacctcgc gaagcggcga tcgttcgtcg aaatcgacgc gaaacggccg
     3601 gcgcacctga tttgcgacga atgcgcccac cccttgccta gttaccacca gacggtcggc
     3661 gcggagggcc gcaaccgctt cccggatcac ggtgcggctg acaccagtgg cggctatcat
     3721 ttcctgctcg gtcggcagcc gcgagcctgg cgggagcttg ccgcttgtga tgtcggcggt
     3781 caggcgcgcg accaattcgg cggtgagacg
//
LOCUS       DATDHO010000223         4541 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_406779, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000223 DATDHO010000000
VERSION     DATDHO010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4541
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_406779"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            30..689
                     /locus_tag="VIY07_04415"
     CDS             30..689
                     /locus_tag="VIY07_04415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6381031.1"
                     /translation="MPEIIFTGPAGRIEGRYHPARQKNAPIAIVLHPHPQFGGTMNHP
                     IIYQLYYAFVHRGFSALRFNFRGVGRSQGSFDHGQGELSDAAAALDWAQTINPEAKSC
                     WIAGFSFGAWIGMQLLMRRPEIEGFISICPPANLYDFSFLAPCPSSGLIIHGDKDAVV
                     PHKDVTTLVDKLKTQKGIVIEQKVVQGANHFFDGKVEALLTSVSAYLDKRLKTERKPA
                     A"
     gene            777..1172
                     /locus_tag="VIY07_04420"
     CDS             777..1172
                     /locus_tag="VIY07_04420"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016279 - protein-lysine
                     N-methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein"
                     /protein_id="HEY6381032.1"
                     /translation="MLLVKAYLDKSAIHGLGVFAGQVIRKGTKVWRFVEGFDRVYSPT
                     EFAKLPKPARDYIWNYGYRVDGEILLTSDHDHHMNHSDNANTHWRNGHIVARRTIRKG
                     EEITNNYREFDAGFCAAFLGKRRNRNRPG"
     gene            1268..2506
                     /gene="tyrS"
                     /locus_tag="VIY07_04425"
     CDS             1268..2506
                     /gene="tyrS"
                     /locus_tag="VIY07_04425"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEY6381033.1"
                     /translation="MSAYKSDFLNVLAERGFIHQVSEPDILDARAKAGPIAGYIGFDC
                     TASSLHVGSLLPIMMLYWLQQTGHRSIALMGGGTTRVGDPSGKDETRRVLTDELINEN
                     LKGIRAIFSKFLKFEGAGGNAVMANNADWLNKLNYIDFLRDVGRHFSVNRMLSFDSVK
                     LRLDRHQELSFLEFNYMVLQAYDFVELNKRYACILQMGGSDQWGNIVNGIDLGRRMLN
                     AQLFALTAPLITTSSGAKMGKTAAGAVWLNPDLVSPYDYWQYWRNTEDGDVARFLKLF
                     TVLPLDEIARLAALKGNEINEAKKVLATEATALVHGRSAAEQAAETARKTFEEGAPAE
                     TLPTVKIENGTGILNAAVATGAVSSTSEARRQIKSGGVKLNGVVVSDERTVLTDDNAT
                     PEGVHVLSFGKKRHFQLRRK"
     gene            complement(2513..>4541)
                     /locus_tag="VIY07_04430"
     CDS             complement(2513..>4541)
                     /locus_tag="VIY07_04430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381034.1"
                     /translation="ASALKRLWPIFAAGEVRAWVDDHIWGGTVERLVVAGNAALEDFK
                     HGGPPMPDDGLSVDIETTGTTVHPITSLPPIRDADLTVRIRGRNAVVNLGRGTVESAP
                     GRRLNIAGGMFEVPDTHPKPAPARANFRIDGGMPAAAALLASEGLRDEVGITLDPTST
                     RGTIAAQVAVKLAIARPMPEDASSYTINADLSNFSADKLLFGQKVEASTLKAVATSDG
                     FQIKGDVKVNGTPAAIDLRKPKGQADTDLRLQATLDEAARRRIGIDLGTTVSGAIPVK
                     VVSRLSDGANDDGMSVEADLTPVKIDNLLPGWVKPAGRTARATYTLMKTGKTVRFDDL
                     SIDGSGATVRGSVEFDSSNELISANFPVFALSDGDKLNLKADRMTDGTLRVAARGDIF
                     DGRNFVKSVLASTDRTKQKQEDLDLDIKLGTVAGHNGETLRSLDLKLSRRSGRIRSFA
                     MSSKIGRDTPLNGDLRVRSRDNHQVIYFETDDAGALFRFTDMYPRMSGGQMWMAMDPP
                     TQEQSPQIGTLYIRRFSVRGEPALEKVVSGAPGTPGGSAGVDFSEMRADFTRVSGKMS
                     IRDGIVRGPLVGATVEGNIDYIRDEVHLRGTFVPFYGINNMFGQIPIVGLFLGGGNKE
                     GLLGITYEAVGPPSAPRISVNPVSAIAPGLLRKFIPSPGTFDPNFAPPPSR"
BASE COUNT          935 a         1332 c         1332 g          942 t
ORIGIN      
        1 tgcggcagcc cggttagagg tcgatagcaa tgcctgagat tatcttcacc ggaccggcag
       61 gtcgcatcga agggcggtat catcctgccc gacagaaaaa tgcaccaatc gccatcgttc
      121 tgcaccctca cccgcagttc ggcgggacga tgaaccaccc gatcatttac cagctttact
      181 atgcttttgt gcatcgcgga ttctctgcgc tgcgtttcaa ctttcgcggc gtcggtcgca
      241 gccagggctc gttcgatcac ggtcagggag agttgtccga tgcggcagcg gctctcgact
      301 gggcgcagac catcaatccg gaagcgaaga gttgctggat tgccggcttc tcctttggag
      361 cctggatcgg catgcagctt ttgatgcgtc ggccggagat cgaaggcttc atatcgatct
      421 gtccgcccgc caacctctat gatttctcgt tcctggcccc ctgcccgtcg tcaggcctga
      481 tcattcatgg cgataaggat gccgtcgttc cgcacaagga tgtcacgacg ctcgtcgaca
      541 agctcaagac ccaaaagggc atcgtgattg aacaaaaggt tgtgcaaggc gccaatcatt
      601 tctttgacgg caaggtggaa gcgctgctta cttcggtcag cgcctatctc gacaagcggc
      661 tgaagactga acgcaagccg gcggcgtaga atttggccgg tgcgccgttc gcgacgcttg
      721 cacgcggatg gcgctcaaat tggcgacacg cggatttgac cgtccgcaca taacccatgc
      781 ttcttgtcaa agcttacctt gataaaagcg caattcacgg tctcggtgtt tttgcgggcc
      841 aagtcattcg caaaggcacg aaggtttggc gtttcgtaga aggcttcgac cgagtttact
      901 cgcccaccga attcgcaaaa ctgccgaagc ctgcgcgaga ctacatctgg aactatggct
      961 atcgggtgga tggcgaaatc ctgctgacca gcgaccacga ccatcacatg aatcactccg
     1021 acaacgccaa tacccattgg cgcaacggcc acattgttgc gcgtcgtacc atccgcaaag
     1081 gcgaagagat tacgaacaac tatcgcgagt tcgatgcggg attttgtgcc gccttcctgg
     1141 ggaaacgacg caaccggaat cgtcccggct aagacgcgcc aagaagcagc tgctctcgcg
     1201 ttgttgaatc caacgccgga cctgttacac caccttcgct ggaagaggct gccccgagaa
     1261 ccaagcaatg agcgcttata agtcggattt ccttaacgtc cttgccgagc gcgggttcat
     1321 tcatcaggtg tccgaaccgg acatcctgga tgcgcgggca aaggccggac ccattgcggg
     1381 ctacatcgga ttcgattgta cggcctcgtc cctgcatgtc ggctcgcttc tgccgatcat
     1441 gatgctgtac tggctgcagc agaccggaca ccgttcgatc gcgttgatgg gcggaggcac
     1501 cacgcgtgtc ggtgatccgt ccggcaagga tgagacacgc cgcgttctca ccgacgaatt
     1561 gatcaacgag aatctcaaag gcatccgggc gatattttcg aaatttctga agttcgaagg
     1621 cgccggcggt aatgcggtga tggccaacaa tgccgactgg ctgaacaagc tcaactacat
     1681 cgactttctg cgcgatgttg gccgccactt ttcggtcaat cgcatgctgt cgttcgattc
     1741 cgtaaagctg cggctcgatc gtcaccagga gctgtcgttt ctcgaattca actacatggt
     1801 gctgcaggcc tacgacttcg tggagctgaa taagcgttac gcctgcattc tccagatggg
     1861 cggctccgat cagtggggca acatcgtgaa tggcattgat ctcggccgcc ggatgctcaa
     1921 tgcgcaattg tttgcgctta ccgctccgct cattacgacc tcctcgggcg caaaaatggg
     1981 caagactgct gccggcgcgg tgtggctgaa ccccgacctg gtgagcccgt atgactactg
     2041 gcagtactgg cgcaataccg aggacggcga cgtcgcccga ttcctcaagc ttttcacggt
     2101 gctgccgctt gacgagatcg cgaggctggc ggcgctcaag ggaaacgaga ttaacgaggc
     2161 aaagaaagtg ctcgcaaccg aggcgacggc acttgtgcat ggccggtccg ccgcagagca
     2221 agccgccgag accgcgcgca agacctttga agaaggtgcg cccgcagaga ccttgccgac
     2281 cgtcaaaatt gaaaatggaa ccgggattct gaatgctgcc gtggcgacgg gcgccgtatc
     2341 atcgacgagc gaagcgcgtc gccagataaa gagcggtggc gtcaaattga atggcgttgt
     2401 ggtgagcgac gaaaggaccg ttctcactga cgacaatgca acgcccgaag gcgtgcacgt
     2461 tctgtcgttt ggcaaaaaac gccacttcca gctcagaagg aagtaatccc actcatcgcg
     2521 atggcggtgg agcgaaattg gggtcaaatg ttcccggcga tgggatgaat ttgcgcaaca
     2581 gtcccggcgc tatggcgctg accgggttga ctgagatgcg cggggcactg ggcggaccga
     2641 cggcttcgta ggtgatgcca aggaggcctt ccttgttgcc gccacccaga aacaggccaa
     2701 cgatcgggat ttgcccgaac atgttgttga tgccgtagaa cggcacgaag gtgcctcgca
     2761 ggtgcacctc gtcccgtatg tagtcgatat ttccttccac cgtcgcgccg acgagaggcc
     2821 cgcgtacgat gccatcgcgg atcgacatct ttccggagac gcgggtgaaa tcagcgcgca
     2881 tctcggagaa gtcgacgccg gccgaaccgc ccggcgtgcc tggcgcgccc gacactactt
     2941 tttccagcgc aggctcgccg cggacggaaa atctccggat gtaaagggta ccgatttgcg
     3001 gcgactgctc ctgggtcggg ggatccatcg ccatccacat ctggccgcca gacatcctcg
     3061 gatacatgtc ggtgaagcgg aagagtgcac cggcatcgtc ggtctcgaaa taaatcacct
     3121 ggtgattgtc gcgcgagcgc acccgcaaat ccccgttgag cggcgtgtcc cggccgatct
     3181 tgcttgacat tgcaaagcta cgaatgcgcc cgctgcggcg cgacagcttc agatcgaggc
     3241 tgcgcaaagt ctcgccgtta tgaccggcaa ccgtgccaag cttgatgtcg agatcgaggt
     3301 cttcctgctt ttgcttggtt ctgtcggtgg acgctaaaac cgacttcaca aaatttcggc
     3361 cgtcaaaaat gtcgccccgc gcggcgacgc gcagcgtccc atcggtcatt cgatcagctt
     3421 tcaggttgag cttgtcgccg tccgacaagg caaagaccgg aaagttcgcc gagatgagtt
     3481 cattcgaact gtcaaattcg accgagccgc gcaccgttgc gccagaccca tcgatgctca
     3541 gatcgtcaaa gcgtaccgtc ttgccggttt tcatcaaagt ataggtggcg cgcgccgttc
     3601 ttcctgccgg ctttacccag ccgggcagaa gattgtcgat cttcaccggc gtgagatcgg
     3661 cctccacgct catgccgtca tcattcgcac catcactgag gcggctgacg actttgacgg
     3721 gaatagcgcc gctgacggtt gtgccgaggt caatgccaat gcggcgtcgg gccgcttcat
     3781 cgagtgttgc ctgtaagcgt aagtcagtgt cggcttggcc tttaggcttg cgcaagtcta
     3841 tcgccgcggg tgtgccgtta accttgacgt ctcccttgat ctggaagcca tcgcttgttg
     3901 ccaccgcctt gagggtcgat gcttccactt tctggccgaa aagcagttta tcggcggaaa
     3961 agttcgaaag gtccgcattg atcgtgtagc tcgaggcatc ctccggcatc gggcgtgcaa
     4021 ttgccaattt gaccgcgacc tgggcggcaa tcgtgccgcg ggtcgatgtt ggatctaggg
     4081 taatgccgac ctcatcgcgc aatccctcgc ttgcaagtag cgcagcagcg gccggcatgc
     4141 cgccatcgat acggaagttc gcacgtgccg gcgcaggctt tggatgcgta tcggggacct
     4201 cgaacatgcc ccccgcgata ttgagtcttc gtcctggtgc cgattcaacc gtgccgcggc
     4261 cgagattgac gacggcattg cgcccgcgga tccggacagt caggtccgca tcacggattg
     4321 gcggcaggct cgtgatcggg tgaacagtcg ttccggtggt ctcgatatcg acggacagac
     4381 cgtcatccgg cattgggggc ccgccgtgct tgaaatcttc gagcgccgcg ttgccggcaa
     4441 ccacgaggcg ctcgacggtt ccaccccaaa tatgatcatc aacccaggcg cgtacctcac
     4501 cggcggcaaa tatgggccaa agccgcttca aagctgaggc g
//
LOCUS       DATDHO010000224         5733 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_258221, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000224 DATDHO010000000
VERSION     DATDHO010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5733
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258221"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2045
                     /locus_tag="VIY07_04435"
     CDS             <1..2045
                     /locus_tag="VIY07_04435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012874565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEY6381035.1"
                     /translation="PVLKDETLQNPRCVFQIVKRHFSRYTPEMVEKATGCSKETFLKV
                     AETILANSGADRTTSFAYAVAWTQHTYGVQIIGACALLQLLLGNIGRPGAGVMALRGH
                     ASIQGSTDIPTLYHSIQGYLTAPTALKKHDTLQDYMAVETIPTGYWANMPKFMISYLK
                     SVYGAAATKENQFGYDWHPKILGDHSHMAMFAAMNAGAVKGMICIGQNPATSLNAKLD
                     RSALRKLEWLVVKDNWITETANYWKNAPEVKNGEVKTADIKTEVFYLPATQVAELEGT
                     FTNTQRMLQFHHKAAEAPGDCRSDTLFSYDLGKRLKKLYANSTLPRDEGFKNLVWDYE
                     HENEHERKLGEPSALKLLKEINGFFTDDPNRHCVGFGELKDDGSTTCASWIYSGVYPA
                     PGKLLADRRTPDPPGKPGAQLQWGWAWPANRRVMYNRASADPEGKPWSEKKKWVWWDA
                     EAKKWVGYDVPDYIAAKPPNDKAKPGAAGMDALPGTAPFIMRPDGLGWLFVPAGLVDG
                     PLPTHYEPVESPVTNLLYKQQTSPVYKYWKDAGNELAKPGDPRFPYVLTTYRLTEHYL
                     AGGMSRWLPWLTELQPELFVEISPELAQEKGIKNLDWCKISSPRTQIRAKALVTRRLQ
                     PFKIDGKVIHQVGMPWHWGYEGLSKGDVVNELTSLIADPNVSMHEAKAFVCNVEKA"
     gene            2136..2933
                     /locus_tag="VIY07_04440"
     CDS             2136..2933
                     /locus_tag="VIY07_04440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEY6381036.1"
                     /translation="MAEPMGFYTDTTVCIGCKACEVACKEWNQLPSTNGGLNTLSGDS
                     YDNTRQLDGIHWRHVKFIEQFTEDRKDGRWLLMSDVCKHCVQVACLEVCPTNAIVRTE
                     FDTVVIQSDACNGCRDCISACPFGVIEINPASGTAQKCTLCYDRMQGGMEPACSKACP
                     TNSIQFGTISELKGRAQKRVEQLHQAGEKRAYLYGADEKMLGGLNSFYLLVDKPEVYG
                     LPPDPKMPTRNLTSSTAFSLLGALLVGLIGIFNFRNRGAAQREEARL"
     gene            2930..3835
                     /gene="nrfD"
                     /locus_tag="VIY07_04445"
     CDS             2930..3835
                     /gene="nrfD"
                     /locus_tag="VIY07_04445"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEY6381037.1"
                     /translation="MNGIPSSTFFSAPPDWGWLIVFYFFFGGLAGGCYFLASLIDVVG
                     RPEDRPLARLGYYIAFPCVIVSTLLLILDLTRPLRFWHMLIESNTFRPMFKFWSPMSV
                     GAWALLIFGIFALISFLAVLDEDHRLDWPAARKFRPPGILSKIIGGIGGLFGFYVAGY
                     TGVLLAVTNRPIWSDTPLLGMLFIVSAASISAALMILLARRSRWTMPGLLALRRLDAW
                     VIALELIVLIAVMISLGPVFRAWMNAWGLLLFFGVIVVGMLIPLALHWRRQWLGDRNV
                     TTAAALVLIGGFILRLVIVFSAQGV"
     gene            3837..4070
                     /locus_tag="VIY07_04450"
     CDS             3837..4070
                     /locus_tag="VIY07_04450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381038.1"
                     /translation="MSLAAIALIVLFLFIVACVSPETTRTRGGGPGADVGNRDKFVQM
                     HEGSRPFESTPKLIPAKHPPLNPASQADELSRK"
     gene            4067..4924
                     /locus_tag="VIY07_04455"
     CDS             4067..4924
                     /locus_tag="VIY07_04455"
                     /inference="COORDINATES: protein motif:HMM:NF016131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HEY6381039.1"
                     /translation="MTAVDSGLQDLKRRHPEWEPWLAVVQEILSATADPQWDQVVPAR
                     AEIQPDKIPLLAGVTVVLERSLVRRLLAQLIQTAQRSGTSKMATLKPALHAELNDLTL
                     FEASLRQDIHRLSEIAAVIGADPEALQAVGSLLPVPLLQACNRHWARSIAKGWTEGYC
                     PVCGAWPAFAEVRGIERSSYFRCGRCGGEWQARCLFCPYCGMTDHNELVSLVPEKSDS
                     NSVIDACKRCLGYAKTFTTLQGSPPAKILLDDLATAHLDIAALEQGYKRPQGVGYRLD
                     VVVTDNHAA"
     gene            4944..5333
                     /locus_tag="VIY07_04460"
     CDS             4944..5333
                     /locus_tag="VIY07_04460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381040.1"
                     /translation="MTTSKDSSQSLRPAAVCSALLAALEAAEGRRRNRKRDQTPDGIG
                     LSIKRSLLERAVQEDPEPEAFGQWLLDYPVKYGTLESSGAVSAMARAVLEEWRLAHSL
                     KEFRTWLEQGAPSDDAKDEKPRERRSS"
     gene            5349..>5733
                     /locus_tag="VIY07_04465"
     CDS             5349..>5733
                     /locus_tag="VIY07_04465"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: protein motif:HMM:NF024214.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEY6381041.1"
                     /translation="MNLTGDQPISDATAVVLAGGKSSRMGRPKSLLLFDGMPLIVHLA
                     RALERMFAETVIVAAPEQELPPLPAILVRDEVPYQGPVGGIYYGLRAASGTACFVTSC
                     DVAFLNPSLISHLLSQISDCDVVVPH"
BASE COUNT         1202 a         1646 c         1654 g         1231 t
ORIGIN      
        1 cgccggtgct gaaagatgag acgctccaga atccccgttg tgtgtttcag atcgtcaaac
       61 ggcatttttc ccgctacacg ccagagatgg tagagaaagc caccgggtgc tccaaagaaa
      121 cgtttctcaa agtggccgaa actattctgg ccaattcggg cgcggaccgg accacttcct
      181 tcgcctatgc ggtcgcctgg acacaacaca cctatggcgt tcagatcatc ggcgcttgcg
      241 cgctgctgca actattactc ggcaacatcg gccgtcccgg cgccggtgtc atggcgctcc
      301 gcggtcatgc atccattcag ggttcgacgg atatccccac gctgtatcat tcgatccagg
      361 gttatttgac ggcaccgaca gcgctcaaga agcacgacac gctgcaagat tacatggcgg
      421 tcgagacgat accgacgggc tactgggcaa acatgccgaa attcatgatc tcctatctca
      481 agtccgtgta cggcgccgcc gcgaccaaag agaaccagtt cggctacgac tggcatccga
      541 agattctcgg cgatcattcg cacatggcca tgttcgccgc gatgaacgcc ggcgcagtga
      601 agggaatgat ctgtatcggg cagaatccag cgacatcgct gaacgccaag ctggatcggt
      661 cggcactcag gaagcttgag tggcttgtcg tgaaggacaa ctggatcacc gagaccgcaa
      721 attactggaa gaatgcgccg gaagtcaaaa atggcgaggt gaagaccgcc gacatcaaga
      781 ctgaagtgtt ctacttgccg gccacccagg tcgccgagct cgaaggcacc ttcacaaaca
      841 cgcagcggat gttgcagttt caccacaaag ccgccgaggc cccgggcgat tgccgctccg
      901 atactttgtt cagctatgat ctcggcaagc gactgaaaaa gctttacgcc aattccactc
      961 tgccgcgtga cgagggtttc aagaatctgg tctgggacta cgagcacgaa aacgagcatg
     1021 agcgcaagct cggcgagcct tcggcgctaa aactcctgaa agagatcaac ggtttcttta
     1081 cggacgatcc taaccgccac tgcgtcggtt tcggcgagct caaggacgac ggctcgacga
     1141 cctgcgcgtc gtggatctac tctggcgtct accccgcgcc tgggaagctt ctcgccgaca
     1201 ggcgcacgcc cgacccacca ggcaaacccg gcgcgcagtt gcagtggggt tgggcatggc
     1261 cggcgaaccg gcgggtgatg tataaccgag cgtccgccga tcccgaaggg aagccatgga
     1321 gcgaaaagaa gaaatgggtt tggtgggatg cggaggcaaa aaaatgggtc ggctacgatg
     1381 taccggacta catcgcagcg aaaccgccta acgacaaagc gaaacccgga gcagccggca
     1441 tggatgcgct tcccgggacc gctcccttta tcatgcgccc ggatggcctc ggttggcttt
     1501 tcgtaccggc aggtcttgtc gacgggccgc taccgacgca ctacgaaccg gtcgaatcgc
     1561 cggtcaccaa tttgctttac aaacagcaga cgagtccggt ctacaaatac tggaaggatg
     1621 ccggcaacga gctggcgaag ccgggcgatc cgaggttccc ttatgtcctg accacgtacc
     1681 gactgaccga gcactaccta gcgggaggga tgagccgctg gcttccatgg ctcaccgagc
     1741 tgcaacccga gctgttcgtc gagatcagtc ccgaactggc ccaagagaaa ggcatcaaga
     1801 atctcgactg gtgcaaaatc tccagcccgc gcacgcagat ccgggccaag gctctggtga
     1861 cgcgccggct gcagccgttc aagatcgacg gcaaggtcat tcaccaggtc ggcatgccct
     1921 ggcactgggg ctacgaagga ctttccaaag gcgatgtggt caacgagttg acgtccctca
     1981 tagccgatcc aaatgtttcc atgcacgagg caaaagcgtt tgtttgtaat gtagagaaag
     2041 cgtgatgcac gccatcgaag atcgaagatg gaggatggaa gatagcgatc ctcgatcctc
     2101 cattctctat cctcgaacca atcctggagg ttcttatggc tgagccaatg gggttttaca
     2161 cagacacgac cgtctgtatc ggctgcaaag cgtgcgaggt agcgtgcaaa gaatggaacc
     2221 agctcccgag caccaacggc ggcctcaaca ccttgagcgg cgacagctac gacaacacgc
     2281 gccagctcga cggcattcac tggcgccacg tcaagttcat cgagcagttc acggaagacc
     2341 gaaaggatgg ccgctggctt ctcatgagcg atgtgtgcaa gcactgcgtc caggtggcgt
     2401 gcctcgaggt ctgcccaacc aacgcgatcg ttcggaccga attcgatacc gtcgttattc
     2461 aatcggacgc ctgtaatggc tgccgagact gtatttcggc ctgccctttt ggcgtgattg
     2521 aaatcaaccc cgcgtcaggc acagcgcaga agtgcacgct ctgttatgat cggatgcagg
     2581 gcgggatgga gcccgcctgc tcaaaggcct gtcccaccaa ctcgatccag ttcggaacaa
     2641 tcagcgagct gaagggaaga gcacaaaagc gggtggagca gctgcaccag gccggggaaa
     2701 aaagagcgta cctttacggc gccgacgaaa aaatgctcgg cggcctgaat tcattttact
     2761 tgctggtgga caaaccggaa gtctacggct tgccgccgga tcccaagatg cccacgcgca
     2821 atctgacatc aagtacggcg ttttcactct tgggggcgtt gttggtcggc ttgatcggca
     2881 tctttaattt ccgcaatcgc ggcgcagcgc agcgcgagga ggctcggtta tgaacggaat
     2941 tccttcgagc acctttttca gcgctccccc agattgggga tggctcattg ttttttactt
     3001 tttcttcggt gggctcgctg gcggatgcta ttttctcgct tcgctcatcg acgtagtggg
     3061 ccggccggag gatcgtccgc tcgcccgtct cggttactac atagcgtttc cctgcgtgat
     3121 tgtgagcacg ctgctcttga ttcttgatct tacgcggccg ctacgtttct ggcacatgtt
     3181 gatcgagtcc aacacttttc ggccgatgtt taaattctgg tctcccatgt cggttggagc
     3241 ctgggcgctt ttgatttttg gaatatttgc tttgatatct tttctagcag tgctcgatga
     3301 agatcaccgt ctcgattggc cggcggcgcg caaatttcgc ccgcccggaa tcttgagcaa
     3361 aataattggg gggatcggcg gtctttttgg attctatgtt gccggctaca cgggggtcct
     3421 gctcgctgta accaaccgcc cgatatggtc ggatacgcct ctgttgggca tgctgtttat
     3481 cgtttcggcc gcatctatat cggcggcgtt aatgatactg ctcgcgcgaa gatcgcgatg
     3541 gaccatgcct ggcttgcttg cgttgcgccg attggacgcg tgggtgattg ccttggaatt
     3601 gatcgtcttg atcgccgtga tgatatcact agggcccgtc tttcgcgcct ggatgaacgc
     3661 ttggggccta ctgctttttt tcggcgtcat cgttgttggc atgctgattc ccttggctct
     3721 ccattggcgc agacaatggc tcggcgatcg caacgtgacc acggctgcgg cgctggtttt
     3781 gatcggcggt tttattcttc ggctggtcat tgtgttttca gcccaaggag tctgacgtga
     3841 gtcttgccgc gatcgcgctc atcgttcttt tcttgttcat tgtcgcctgc gtcagtcccg
     3901 agacgacacg gacccgcggc ggcgggccgg gcgccgacgt gggcaaccgc gataaatttg
     3961 tccagatgca cgagggctca aggccgtttg agagcacccc caagctgatt cctgccaagc
     4021 atccaccttt gaatcccgcc agccaagcgg atgagctaag ccgaaaatga ccgcagtcga
     4081 ctctggactg caggatctta aacgccggca tccggagtgg gagccgtggc tcgcggtcgt
     4141 tcaagaaatt ctcagcgcaa cggccgatcc tcaatgggac caagtggttc cggcgcgagc
     4201 cgaaatacag ccagataaaa ttccgctact cgcaggagtc accgtggttt tggagcgtag
     4261 cttagttcgt cgtttgctgg cgcagctgat ccaaacggct cagcgcagcg gaacttcgaa
     4321 gatggccacg ctaaaacctg cgttgcatgc cgaattgaat gacttgacct tgttcgaggc
     4381 ttcactgcgc caggatatcc accgtctgag cgaaatcgcc gctgttatcg gcgccgaccc
     4441 cgaggcgctc caagctgttg gatctcttct cccggttcct ttactgcagg cctgcaatcg
     4501 ccattgggca cggtcgatag cgaaaggctg gacggaaggg tattgtccgg tctgcggcgc
     4561 ctggccggca tttgccgaag tgcgcggcat cgagcgcagc agttattttc gctgcggccg
     4621 ctgtggcggc gagtggcagg ctcggtgctt gttctgtccc tactgcggta tgaccgacca
     4681 taacgagctt gtctccctcg tgcccgagaa aagcgattca aactcggtga tcgacgcctg
     4741 taagcgctgc cttggctatg caaaaacctt tacgaccctt caaggtagcc ccccagcgaa
     4801 gattcttctc gacgatcttg ccaccgcgca tcttgatatc gccgccctcg aacaaggata
     4861 caaacgccct caaggggtgg gctatcgtct cgacgtagtc gtcaccgata accacgcggc
     4921 gtgacgcccg tttgtcgccg gccatgacaa ccagcaaaga ttcatcgcaa tctcttcgac
     4981 ccgctgcggt gtgcagcgcg ttgctcgccg cccttgaagc cgcggaagga cgccgccgca
     5041 accgcaagcg cgatcaaaca ccagacggca tcgggttgtc catcaagcgc tcccttttgg
     5101 agcgggcggt tcaagaggac cctgagcctg aagcattcgg acaatggcta ctggattacc
     5161 ctgtgaaata cggtaccttg gaatcatctg gggctgtctc cgcgatggcg agagccgttc
     5221 tcgaagaatg gcggctggct cattccttaa aagagttcag aacctggctc gagcagggag
     5281 cgccgtcgga cgatgcaaaa gatgaaaagc cgagagaacg gcggtcgtca tgacgcaaca
     5341 tggatgagat gaatctaacc ggcgatcaac cgatatccga cgccaccgcc gttgtgctgg
     5401 ccggaggcaa gagctcgcgt atgggccggc cgaaatcgct gttgctcttt gacggtatgc
     5461 cgctcattgt ccacctcgcg cgcgctttgg aacgcatgtt tgccgagacc gtcatcgtcg
     5521 ccgcgcccga gcaggaactg ccgcctctgc cggcaatctt ggtacgggac gaagttcctt
     5581 atcagggacc ggtaggcggc atctattatg gcttgagggc agctagtgga accgcctgtt
     5641 tcgtgacgtc ttgcgatgtc gcgtttctga acccatcatt gatctcccat ctgctatcgc
     5701 aaatctcaga ctgcgatgtc gtggtgccgc att
//
LOCUS       DATDHO010000225         1587 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_454374, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000225 DATDHO010000000
VERSION     DATDHO010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1587)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1587)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1587
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454374"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..147)
                     /locus_tag="VIY07_04470"
                     /pseudo
     CDS             complement(1..147)
                     /locus_tag="VIY07_04470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011970848.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            240..1375
                     /locus_tag="VIY07_04475"
     CDS             join(240..498,498..1375)
                     /locus_tag="VIY07_04475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612008.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEY6381042.1"
                     /translation="MSRRPRRNHTPALKAKVALAAIKGDRTVAQLAEQFDVHPNQVTS
                     WKAQLEGGAADVFGPGSGGGTAEPAVDVKSLHAKIGELTLENGFFRRRAHQGGIAERK
                     AMIDREHDLPIVRQAEALNISRGSVYYLPRPVPDADLAIMRRLDRLHLEYPFAGSRML
                     RGLLVAEECKIGRRHVKTLMKRMGIEALYRRPRTTKPEPGHKIYPYLLRGIEITRPNQ
                     VWAMDITYIPMARGFVYLAVVLDWFSRRVLSWRLSITMDAAFCVETLEDALARHGKPD
                     IFNTDQGRQFTGVAFTGTLANNGIAISMDGKGAWRDNVFVERLWRSVKYEEVYLRAYD
                     SVSEARASIGRYLDFYNSRRPHASLDGITPDQAYFNLPPLRLAA"
BASE COUNT          335 a          485 c          497 g          270 t
ORIGIN      
        1 cgagaacgca taaacggctc cctgtggcca cgccgttgag agatccggct ccaaacgccg
       61 gcccgacgcc agcgaacgaa gcgattataa caagttgtac agggggccga actcctgcgg
      121 caggtcgcgc cacggtgcgc cggatcgcaa gagagccggt cccggaaatt tgcacagggc
      181 gataagtgga atttctgcct gacggcaggc acgctgtggc ctgcgaatca ggagagacca
      241 tgtcgagacg accgcgccgg aaccacacac cggccttgaa ggcgaaggtg gcgcttgctg
      301 ccatcaaggg cgatcgaacc gttgcgcagc ttgccgagca gttcgacgtt catcccaacc
      361 aggtcacgtc gtggaaggcg cagctcgaag gcggcgccgc ggatgtattc ggtccgggca
      421 gcggcggcgg gacagccgag cctgccgtcg acgtgaagtc gctgcacgcc aagatcggcg
      481 agctgacgct ggagaacgat tttttagaag gcgcgctcac caaggcggga ttgctgagcg
      541 caaagcgatg atcgaccgtg agcacgatct gccgatcgtc aggcaggcgg aagctctgaa
      601 catcagccgc ggcagtgtct actacctgcc gcggccggtg ccggacgccg acctcgcgat
      661 catgcggcgt ctcgaccggc tgcatctgga gtaccccttc gccggttcgc ggatgctgcg
      721 aggcctgctg gtcgccgagg aatgcaagat cggccgtcgg catgtcaaaa cgctgatgaa
      781 gcggatgggg atagaagcac tctatcgccg tccgcgcacg accaagccag agcctgggca
      841 caagatctat ccctatctgc tgcgcggcat cgaaatcaca cggccgaacc aggtctgggc
      901 gatggacatc acctacatcc cgatggcacg cggattcgtc tatctggccg tggtactcga
      961 ctggttcagc cgccgcgtgc tgtcgtggcg gctgtcgatc acgatggacg cggcgttctg
     1021 cgtggagaca ttggaagacg cgctggcgcg tcacggcaag ccggacatct tcaacaccga
     1081 ccagggcagg cagtttaccg gggtggcctt caccggcacg cttgccaaca acggcattgc
     1141 gatcagcatg gacggcaaag gcgcctggcg agacaacgtg ttcgtcgagc ggctatggcg
     1201 cagcgtcaaa tacgaggagg tgtacctgcg agcctacgac agcgtgtccg aggcccgcgc
     1261 ttcgatcggc cgctatctgg acttctacaa cagtcgccga ccgcatgcga gccttgacgg
     1321 catcacaccc gatcaagcct acttcaacct gccgcctctc cgcttggcgg cctaaccccg
     1381 gcagaggctc cacttatcga cgcggaaatt ctgttcagac aaccggagcc acctcagaag
     1441 gcaacccgcg agaggaagct catggctaag ctcaacatca atggcagtgt ccgcgttcaa
     1501 cccttttttt ttcaagaagg cgcgtcatca aaggacgcgg ttatacgatt ggcaaaaatg
     1561 gacatgtcct cggaggcggt tacgttc
//
LOCUS       DATDHO010000226         2856 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_258241, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000226 DATDHO010000000
VERSION     DATDHO010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2856
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258241"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(274..651)
                     /locus_tag="VIY07_04480"
     CDS             complement(274..651)
                     /locus_tag="VIY07_04480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003546024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2200 domain-containing protein"
                     /protein_id="HEY6381043.1"
                     /translation="MKRATARAAANWRRVYAMPVASVYPSYIAKAEKKGRTRAEVDEI
                     FFWLTGHSQASLEAEFAKKTSFEDFFAHAPKMNPSRFLITGVVCGVRVEEIEEPMMRE
                     IRYLDKLIDELAKGKAMEKILRK"
     gene            complement(657..1010)
                     /locus_tag="VIY07_04485"
     CDS             complement(657..1010)
                     /locus_tag="VIY07_04485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006725679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381044.1"
                     /translation="MPRFVAVYTMKPEDVAAFRARPKTEQEAIDKAGLKAWEEWGKRN
                     AAAIVATDVMVGKTRRVTKSGIADAQNQIAGFLIVEAADIAAAAGLFQDHPHITVFPG
                     DGIDVMPVVTGPPED"
     gene            1594..>2856
                     /locus_tag="VIY07_04490"
     CDS             1594..>2856
                     /locus_tag="VIY07_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HEY6381045.1"
                     /translation="MRRFVAGADRAQSTLLPESLDDWVDESNPVRVVDAFVDALDIAD
                     LGFEGVEPAVTGRPSYHPSCLLKLYIYGYLNRVQSSRRLEREAGRNLEVMWLLGRLAP
                     DHKTIADFRKDNGGAIKKVCARFIDLCRRMGLLSKASVAIDGSKFKAVNNRDKNFTSA
                     KIERRRKQLEESVSRYLSQLDTADRQDPSETLTLKKVRIKEKLERLKSEIAKLAAIEK
                     QVLASPDQQISLTDPDSRSMATSGRGSGVVGYNVQTAVDTEHHLIVAHEVTNVGNDTA
                     HLANTAQAAKTALQVDKLEAVADRGYFDGEEILACEQGGISVTLPKPQRSGAKSEGRF
                     GKQDFVYLADENVYRCPAGEKLKYRYTNEEHGQTLHRYWADACRTCAIKDQCTTGRER
                     RITRWEHEEVVEAVQERLDKNPDAMRTRR"
BASE COUNT          532 a          795 c          971 g          558 t
ORIGIN      
        1 agctgcttgg tgatgtcggg agtggcactg accgatgttt cgcggcgcaa cattccgtcc
       61 gcttgtgggg gagagcgtaa gtgactgacg cagctcagtt tcgtctccct tgaccggtcc
      121 tgccgtcatc cagcatctcc aatgctcagg gcgttgttgc cacaccctgc gccacgcgcc
      181 gcagaccaca gggcaagcga tggggtgaac atggccgcat gctggccgga aaggccgccg
      241 cggccaccgc gggcgagctt gctaacgccc tggctatttg cggaggatct tttccatcgc
      301 cttgcccttg gcgagttcgt cgatgagttt gtcgaggtag cggatctcgc gcatcatcgg
      361 ctcctcgatc tcctccacgc ggacgccgca tacgacgccg gtgatcagaa agcgggacgg
      421 gttcatcttc ggcgcgtgcg cgaagaaatc ctcgaagctc gtcttcttcg caaactcggc
      481 ttccagcgag gcctggctgt gaccggtgag ccagaagaag atctcgtcga cctcggcccg
      541 ggtgcggccc ttcttctccg ccttggcaat ataggaggga tagacgctcg caacgggcat
      601 ggcatagacg cggcgccagt tggcggcggc cctggctgtt gctcgcttca tggcggctag
      661 tcctctggcg gccccgtgac gacaggcatg acgtcgatgc cgtcgccggg gaagacggtg
      721 atgtgcgggt ggtcctggaa gaggccggcg gcggcggcga tgtcggcggc ttcaacgatc
      781 agaaagccgg cgatctggtt ctgcgcatcg gcgatgccgg atttggtgac gcgcctggtc
      841 ttgcccacca tgacgtcggt cgcgacgatg gcggcggcgt tgcgcttgcc ccactcctcc
      901 cacgccttca ggccggcctt gtcgatcgcc tcctgctcgg tcttggggcg cgcgcggaag
      961 gcggcgacgt cttccggctt catggtgtag acggcgacga agcggggcat gggcgtgctc
     1021 cggacttggt gggatgcgca tcatagaggg acgacaccac cggcgcgagt cctccctgcg
     1081 ggactctact cactcgcagt acagcgacgc tagtctcctc tcgcctcggc gcttggggac
     1141 gatgcgtcgt atgtccgctt cggggcggat tgggtgaggg gagagatgca gatggtgttc
     1201 gcaggcgttc acgccgcact gatggcgttc gcgccggggc tgacgggggt gggcgacctc
     1261 gccccgccgg gggccagtca agtcaggccg ggggtggagt tggccgccgc ccacccgccc
     1321 tcggcaaatg tttgccggtg gccgcgggtt aaaggagact ctgtctgtaa gagtgccggt
     1381 aaccgagttt ggaagttgtg acctacggta gatgtcggaa attggcacag ggctgtcata
     1441 tatcggcgat gcgtctgtca ggttcgcttc cgaatgtatt tcggacgatc agttctcgaa
     1501 gtgtcccatt aagccccgag gcagtacttg accctggctg tgtaaaaacg cgggtgctgc
     1561 taagattctc ctggtgattc ttcgggggaa ttgatgaggc gcttcgttgc aggggcggat
     1621 cgggcgcagt cgacgctgtt gccggaaagc ctcgatgact gggttgacga gagcaatcct
     1681 gttcgcgtgg tcgatgcctt cgtcgatgca ctggatattg ccgatctggg ctttgagggg
     1741 gtcgagccgg cggtgacggg acggccgtcc tatcatcctt cctgcctctt gaagctctac
     1801 atctatggct acctcaaccg ggtgcagtcg agccgccggc tggagcgcga agctgggcgc
     1861 aacctcgagg tgatgtggct gctgggtcgg ttggctccgg accacaagac gattgcggac
     1921 ttccgcaagg acaacggcgg cgccatcaag aaggtttgtg cgcgcttcat tgatctgtgc
     1981 cggcggatgg gcctgctttc gaaggcgagt gttgcgattg atggcagcaa gttcaaagcc
     2041 gtgaacaacc gcgacaagaa tttcacgagc gcaaaaatcg agcggcggcg caagcaattg
     2101 gaagaaagcg tatcgcggta tctgagccag ctcgacacgg ccgatcgaca ggatccgtcg
     2161 gagacgctga cgttgaagaa ggtgcggatc aaggagaaac tggaaagact gaaatcggaa
     2221 attgccaagc tggcggcgat cgagaagcag gtgctggctt cacccgatca gcagatctca
     2281 ttgaccgatc ccgacagccg atcgatggcg acgagtggcc gcgggtccgg tgtcgtgggg
     2341 tacaatgtgc agaccgccgt cgacaccgag catcatctga tcgttgcgca cgaggtgacg
     2401 aacgttggca atgacacggc acatcttgcg aacacggcgc aggcagcaaa gaccgcgctg
     2461 caggtggaca agctcgaagc tgtggctgat cgcggctact ttgacggcga ggagatcttg
     2521 gcctgcgagc agggcggcat cagcgttacg ctgccgaagc cgcagcgatc gggcgcgaaa
     2581 tcggaaggcc gctttggcaa gcaggacttt gtttatttgg ccgatgaaaa tgtctatcgc
     2641 tgcccggcgg gtgagaaact gaagtatcgc tatacgaacg aggagcacgg ccagacactt
     2701 caccgttatt gggctgatgc gtgccgtacc tgtgcaatca aagatcagtg cacgacagga
     2761 cgagagcgtc gcatcacacg atgggagcac gaggaggttg tcgaggcggt gcaggaaagg
     2821 ctcgacaaaa atccggacgc catgcgaacg cgccgt
//
LOCUS       DATDHO010000227         6415 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_10246, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000227 DATDHO010000000
VERSION     DATDHO010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6415
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10246"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VIY07_04495"
     CDS             complement(<1..181)
                     /locus_tag="VIY07_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381046.1"
                     /translation="MKHGIIAGLAAVSLHATAIAMDTRHPDWPCPQIVVPKLSIVAFW
                     TGPEIDDVGDAWMKDP"
     gene            complement(178..1053)
                     /locus_tag="VIY07_04500"
     CDS             complement(178..1053)
                     /locus_tag="VIY07_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6381047.1"
                     /translation="MNSTIGDRPSAISVDLPLKGFTPGQFAICLKGIVWRESLRFLHQ
                     RERFISALVRPLVWLFIFAAGFRQVLGLSIIPPYQTYILYSEYITPGLIAMIQLFNGM
                     QSSLSMVYDREMGNMRTLLVSPFPRWYLLCSKLIAGTAVSLLQVYAFLLIARFWEIGP
                     PPVGYVLVLPALVLCGLMLGALGMLISSAIKQLENFAGVMNFVIFPMFFASSALYPLW
                     QVRESSPLLYYICEFNPFTHAVELIRFALYAQVNWLSLAIVGGCTVLFILGAILAYDP
                     SRGLITRRGETAGAA"
     gene            complement(1050..1802)
                     /locus_tag="VIY07_04505"
     CDS             complement(1050..1802)
                     /locus_tag="VIY07_04505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381048.1"
                     /translation="MTTPMLSVEAVSHAYGERRALDNVTFAVGPATFAVLLGLNGAGK
                     STLFSLITRLYATQRGRIRIFDHDVERASGEALRILGVVFQSRTLDLDLSVMQNLMYH
                     AALHGIRRREAQARADEVLVRIALKDRAHDKVRNLSGGHMRRVEIARALLHCPRLLVL
                     DEPTVGLDINSRADILRYVRQLIAEDGISVLWATHLIDEVGDNDHLIVLHQGHVLANG
                     PLSRVLANCGATNVRDAFARLTGSEHLMSEPE"
     gene            complement(1831..2805)
                     /locus_tag="VIY07_04510"
     CDS             complement(1831..2805)
                     /locus_tag="VIY07_04510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YVTN family beta-propeller repeat protein"
                     /protein_id="HEY6381049.1"
                     /translation="MSKRHPGLLAFAIAIGLAGPASAFTAYVSNEKGNTISVVDIDKM
                     ETVRTIKVGQRPRGIELTKDDNHCLVAVGDDDTVQVVDTKTGEVVANLPSGPDPELFI
                     QSPDGRVLYVANENNNTVTIIDMERRVALGEVQVGVEPEGMGISPDGKVLVNTSETTN
                     MAHFIDTRERKIIANVLVDSRPRYALFKTDASELWVSSEIGGTVSIIDPVKHQVTKKI
                     SFAIPGLRSEAIQPVGMSITKDGKTGFVALGPANRVAVVDGTTHEVKKYLLVGQRVWH
                     MALTPDEKYLLTTNGLSNDVSVIEVASLKVIKSIQVGELPWGITITKR"
     gene            complement(2839..4029)
                     /locus_tag="VIY07_04515"
     CDS             complement(2839..4029)
                     /locus_tag="VIY07_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381050.1"
                     /translation="MFIPLSALALIILLGLATAAQAQDPLDIKIGYLRRAQQQETISL
                     VQMPPPDIGLAGAQMAIKDNNTTGRFLNQRYLLIDMRLKTGDDPAAAVRQLASQGVSL
                     IVADLPADELLRAADAGKADRILFFNVAATDDRLRQKDCRGNIVHTAPSRAMLADGLA
                     QYLVWKKWVRWFLVVGSHERDQLFAAALTRAATRFGAKIVHQREFKDTGGARRTDSGV
                     AQIQQQMPVFTQEVPNYDVLVVADESEVFANNLPYRTWDPRPVAGSAGLVPTSWDASN
                     DLWGGIQMQSRFTEQFKRLMTSLDMQAWTAVRMVGEAASRQNSADPKVLFDFLKGPQL
                     ALGAFKGQKLTVRDWDLQLRQPILLTDGRTIVSVSPQAGFLHQFSALDTLGYDRPETQ
                     CSLQ"
     gene            4195..5376
                     /locus_tag="VIY07_04520"
     CDS             4195..5376
                     /locus_tag="VIY07_04520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(5-formylfuran-3-yl)methyl phosphate synthase"
                     /protein_id="HEY6381051.1"
                     /translation="MTMLLASVTGSGEAELAINHGADIVDLKDPTKGALGALEPSVVR
                     DAVRAIAGRRPVSAVIGDLPMEPDQINAAVRTMAATGVDYVKVGLFADPRRGECVRAL
                     AGLARRTKLVGVMFIDCEPDNKLIGQMAESGFAGAMLDTARKNGERLLDHADPAAIGD
                     FVRGCRSHGLFTGLAGSLEAADVPRLLLLAPDYLGFRGALCTRHDRQAGLDPAALSLI
                     RGLIPHDSRGSESERFRQEKTEYWLLAARGYSEAGKDGTPMDRVLVHDFEIPARIGVY
                     ENEREIPQRVRFNVDADVVRAAQPAQDLRDVLSYDIIADGIRLIVAEGHIPLIETLAE
                     RIASFVLEYPQVQGVTVKVEKVQTGSGRVGVEIRRQRAAAVAKVYHLFPSVSGKRGPA
                     D"
     gene            5377..6072
                     /locus_tag="VIY07_04525"
     CDS             5377..6072
                     /locus_tag="VIY07_04525"
                     /inference="COORDINATES: protein motif:HMM:NF012899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381052.1"
                     /translation="MRGKCVTVIKLGGSFAGSRYLAGWVEVLANSGGRSVVVPGGGPF
                     ADAVRHAQPKLGFNDAVAHHLALLAMEQFGQALASLSSNFAIVCSAAAIRRVLRAGDV
                     PIWSPARMVLRRPEIIPSWDITSDSLAAWLAGHIGAGQIILVKHGGPFEDPVRAVDLV
                     ERGIVDRAFPRFLTASGAPASIVAARNYAAAARVIRNGGTPGTPIDLHQPGAKRLLPR
                     LWPISKSHAGDGR"
     gene            6033..>6415
                     /locus_tag="VIY07_04530"
     CDS             6033..>6415
                     /locus_tag="VIY07_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavoprotein"
                     /protein_id="HEY6381053.1"
                     /translation="MANIKKPRWGWALTGSGHFFKECLGIVRELEDVDLFVSRAATEV
                     IRMYRQDFDLPKSMRIYRDTTASAAPVGAFYYGTYHTLVLAPATSNTVAKCVYGISDT
                     LATNVFAQAGKCRVFSIVFACDTAP"
BASE COUNT         1354 a         1794 c         1916 g         1351 t
ORIGIN      
        1 tcggatcttt catccaggca tcgccaacat cgtcgatctc gggaccggtc cagaaggcca
       61 cgatcgaaag cttgggcacc acgatttgag gacagggcca gtctggatga cgtgtatcca
      121 tggcaatcgc ggtggcgtgt agcgagacag cggccagtcc tgcaatgatc ccgtgcttca
      181 tgctgcaccc gcagtttcgc ctcgacgcgt gatgagcccg cgcgatggat cgtaggcgag
      241 aatggcgcca aggatgaaca ggacggtgca cccgcccacg atggcaaggg agagccagtt
      301 cacctgtgca tagagggcaa agcgaatcaa ctcgacggca tgcgtgaaag ggttgaactc
      361 gcaaatatag tagagcagcg gactgctctc gcggacctgc cagagcggat aaagcgccga
      421 tgaggcaaaa aacattggaa agatcacgaa attcattacg cctgcaaaat tctcaagctg
      481 cttgattgcc gaggagatca gcatgccaag cgctccgagc ataaggccgc agagcacgag
      541 tgccggcagg accagcacat agccaacagg cggcggcccg atctcccaga accgcgcgat
      601 cagcaggaat gcgtatacct gcaatagcga aacggctgtg ccggcgatca gcttcgaaca
      661 aagaagatac cagcgcggaa acgggcttac cagcaacgta cgcatgttgc ccatttcacg
      721 atcgtacacc atcgagagcg atgactgcat gccattgaac agctggatca tcgcaatcaa
      781 gccaggggta atgtactcag agtaaaggat ataggtttga taaggaggga tgatggacag
      841 gccgagcact tgtcggaaac cggcagcgaa aatgaacagc cagacgaggg gacgaaccaa
      901 agctgagatg aagcgttcgc gctgatgcag gaacctgaga ctctcgcgcc aaacgatacc
      961 cttaaggcaa atcgcgaatt ggccaggcgt aaagcctttt agcggcaagt cgacagaaat
     1021 ggcgctcggc ctgtcgccga tggtgctgtt cattcgggct cgctcatcaa atgctcgctg
     1081 ccggtcaacc gagcaaaggc atcacgaacg ttcgtggccc cgcaattggc gagcacgcgt
     1141 gacagggggc cgttggccaa gacatgccct tggtgcaaca cgatcaaatg atcattgtca
     1201 ccaacttcgt cgatcaggtg ggtggcccac aacacgctga tgccatcctc ggctatcaat
     1261 tgccgcacgt aacgcaggat atcggctcgc gaattgatgt cgaggccgac ggttggttcg
     1321 tcaaggacca ggaggcgggg acagtgcagc aaggcgcgtg caatctccac acgccgcata
     1381 tgtccccccg acaggttgcg aaccttgtca tgcgctcgat ctttcagcgc tatgcgcaca
     1441 agcacttcgt ccgcgcgtgc ctgtgcctca cgcctgcgaa ttccatgaag cgccgcgtga
     1501 tacatcaggt tttgcatgac cgagagatcg agatcgaggg tgcgggactg aaacacaaca
     1561 ccgagaattc gcaaggcctc gccagaggcc cgctccacat cgtggtcaaa gatccggatg
     1621 cgtccacgct gcgtggcata tagccgggtg atcaatgaaa agagcgtgct tttgccggcg
     1681 ccgttgagac caagcaatac ggcaaatgtc gccggtccga cagcgaatgt cacattgtcg
     1741 agcgcgcgcc gttcgccata ggcatggctg actgcttcaa ccgaaagcat cggtgttgtc
     1801 atgccctgca accatccggc tttgatccgt tcagcgcttg gtgattgtta tgccccacgg
     1861 caattcgcct acctgaatag acttgattac tttcaggctg gcgacctcga tgaccgagac
     1921 atcgttggaa aggccgtttg tggtcagcag gtacttttcg tcgggcgtta acgccatgtg
     1981 ccaaacgcgt tgacccacaa gaagatactt ctttacttcg tgagttgtgc catcgactac
     2041 ggctactcgg ttggccggac cgagagcaac gaagccggtc ttgccgtctt ttgtaatgct
     2101 catacccacg ggctgaatcg cctcgctgcg cagacccggg atagcgaagc tgatcttttt
     2161 ggtcacctgg tgcttgaccg ggtcgatgat gctgactgtg ccgccgattt cggacgagac
     2221 ccagagttcc gacgcgtcag ttttgaacag cgcgtaacga ggccgcgaat ccaccagcac
     2281 gttggcaatg attttgcgct cgcgggtgtc gatgaaatgc gccatgttgg ttgtttctga
     2341 ggtgttgacg agcactttac cgtcggggct gatgcccatc ccttccggtt cgacgccaac
     2401 ttggacctcg ccaagagcaa cccgtcgctc catatcgatt atcgtgaccg tgttattgtt
     2461 ttcgttggcc acgtagagca cgcggccatc cgggctttgg atgaacaact cgggatcggg
     2521 tcccgatgga aggttggcaa ctacttcgcc tgttttggtg tcgacgacct ggaccgtgtc
     2581 gtcatcaccc accgccacca ggcaatggtt atcgtccttg gtcagctcga tgccgcgggg
     2641 ccgctggcca actttgatgg tcctgacagt ttccatcttg tcgatgtcca ccacgctaat
     2701 ggtgttgccc ttctcgttcg aaacataggc ggtaaaagcg ctcgctgggc ctgcaaggcc
     2761 gatagcgatt gcaaaagcca gcagaccagg gtgtcgtttg ctcattggtt gctcagacta
     2821 atttcattgt ggcactaact attgcagact gcactgcgtc tcgggacggt catagccgag
     2881 tgtatcaagt gccgagaact ggtgcaggaa gcctgcctgc ggcgagacag agacaatggt
     2941 tcggccatcg gtgagcagaa tgggctgacg tagttgcagg tcccagtcac gcactgtcag
     3001 cttttggcct ttgaaggcgc cgagcgcgag ttgcggcccc ttgagaaaat cgaagagcac
     3061 ctttggatcg gccgaattct gacgtgaggc ggcttcgcca accatacgga ccgcggtcca
     3121 tgcctgcata tcgagcgaag tcatcagccg tttgaattgt tcggtaaagc gactttgcat
     3181 ctggattccg ccccacaggt cgtttgatgc gtcccaactg gtgggtacca gcccggcgga
     3241 accggcgacg ggccgcggat cccaggtgcg gtagggcaaa ttgttcgcga aaacttcgct
     3301 ctcgtcggcc accacgagga catcatagtt cggcacttcc tgggtgaaga cgggcatctg
     3361 ctgttgaatc tgtgcaacgc cgctgtcggt acgacgcgca ccgccggtgt ccttgaattc
     3421 ccgctgatga acgatcttgg caccgaagcg agtagctgct cgcgtcagcg ccgcagcgaa
     3481 aagctgatcg cgctcatgtg accccactac cagaaaccaa cggacccact tcttccacac
     3541 caggtattgt gcaaggccat ccgccagcat cgcacgcgat ggtgcggtgt ggactatgtt
     3601 gccgcggcag tctttttgcc ggagacggtc atctgttgcg gcgacgttaa aaaacaagat
     3661 gcgatccgct ttgcctgcat cggcagctct tagcagttca tcggccggaa gatccgctac
     3721 aatgagggag acgccctggc ttgcgagttg gcgtaccgcc gccgcggggt cgtcaccggt
     3781 tttcaagcgc atgtcgataa gcaagtagcg ctgattcagg aaccggcccg tcgtattatt
     3841 gtccttgatc gccatctggg cgccggcgag cccgatatcg ggtggaggca tctgtacaag
     3901 tgaaatcgtt tcttgttgtt gtgcccggcg tagataacca atcttgatat cgagcggatc
     3961 ctgggcttga gcggcggttg caagcccaag caggatgata agggcgagcg ctgaaagcgg
     4021 gataaacact gtgttcacga ctagatacgc cgctgacttt gttcactttc gcgatcagac
     4081 tgccaatcct tgttcaattc aaggtcgata ttgactaacc tacggacgac acctccgagc
     4141 aatccctgac cctacgctcg actgaactgt gcgaaactcg atggagcccg tttaatgact
     4201 atgttgttgg caagcgtaac gggaagtggg gaagcggaac tcgcgatcaa ccatggcgcc
     4261 gatattgtcg atctgaaaga tccgacgaaa ggtgcgctag gcgcgctcga gccttctgtc
     4321 gtgcgtgatg cagtcagagc tatcgccggc cggcggccag tgagcgccgt catcggcgat
     4381 ttgcccatgg agcccgatca aatcaatgct gccgtccgaa caatggcggc aaccggcgtc
     4441 gactacgtca aggttggtct tttcgccgac ccccgacgtg gagaatgtgt tcgggcactc
     4501 gctggacttg cgcggcgaac caagcttgtt ggcgtgatgt tcatcgattg cgaaccggac
     4561 aacaaattga tcggtcaaat ggccgagtcg ggatttgccg gtgccatgtt ggatactgcg
     4621 cgcaagaatg gcgaacggtt gctcgatcat gccgatccag cagccatcgg tgacttcgtc
     4681 cgtggctgcc gttctcatgg gctgttcaca ggacttgcag gatcgctgga agcagcggac
     4741 gttccacgct tgttgctgct cgctcccgac tatcttggat tcagaggtgc cctatgtacc
     4801 cgccacgacc ggcaggcagg attggatcca gctgcgctga gcctgatacg cgggctgatc
     4861 cctcacgact cacgcggtag tgaaagtgag cgcttcaggc aagagaagac ggagtattgg
     4921 ctgcttgcgg cgaggggcta ttctgaagcc ggcaaagatg gcacgccgat ggaccgcgtt
     4981 ttggtccacg attttgaaat tcccgcgcgg ataggtgtct atgaaaacga acgcgaaatt
     5041 ccgcagcgcg tgcgcttcaa cgtagacgcc gatgttgttc gcgcagcgca gccagcgcag
     5101 gatctgcgtg acgtgctctc ttatgacatt atcgccgacg gcattcgtct gattgtggct
     5161 gaaggccata taccgctaat cgaaacgctg gccgagcgca tcgccagttt cgtgctcgaa
     5221 taccctcagg tccagggcgt cactgtcaag gtggagaagg tccaaaccgg ctctggccgg
     5281 gtgggcgtcg aaatcaggcg gcagcgcgcc gcggccgtcg ctaaggtcta tcatctgttt
     5341 ccctcggtct cgggcaagag gggacccgcc gactagatgc gtggcaagtg cgtcaccgtg
     5401 atcaagctcg gcggcagctt tgcaggctcg cgatatctcg ccggctgggt cgaagtcctg
     5461 gcaaactctg gcggccgcag tgtcgtcgta cctggcggag gcccctttgc cgacgcggtc
     5521 cgacacgcac agccaaaatt aggcttcaac gatgcggtcg ctcatcacct cgctctgctc
     5581 gcgatggaac agttcgggca agcgttggca agcctcagtt caaacttcgc tatcgtttgt
     5641 tcggccgctg cgatccgacg tgttcttcgc gccggcgatg tgccgatctg gtcgcctgcg
     5701 aggatggtgc tgcgcaggcc ggaaatcatt ccgagctggg atatcacctc ggacagcctg
     5761 gcggcctggc tcgccggcca tatcggtgcg gggcagatca tactggtcaa gcacggcggg
     5821 ccctttgagg atccggtgcg ggcggtcgat ttggtggagc gcggcatcgt agaccgagcc
     5881 tttccgcgct ttttgaccgc cagcggggcg ccggcctcga tcgtggctgc caggaattat
     5941 gcggcggcag caagggtcat tcgcaatggc ggcacgccgg gaacgcccat cgacttgcat
     6001 cagccgggtg cgaagcgctt acttccgcga ttatggccaa tatcaaaaag ccacgctggg
     6061 gatgggcgct gacggggtcg ggacacttct ttaaagagtg tctaggcatt gtgcgcgagc
     6121 ttgaagatgt tgacctcttc gtcagtcgtg cggcgaccga ggtcattcgc atgtatcggc
     6181 aggattttga tctcccgaaa tcgatgcgca tctatcgcga caccacggct agtgcagcgc
     6241 cggtgggtgc tttttattac ggcacatatc acacactggt tctggcaccg gcaacctcga
     6301 acacggttgc caaatgcgtg tatggaattt ccgataccct ggcgacgaac gtctttgcgc
     6361 aggctggcaa gtgcagagtg ttttctatcg tctttgcctg cgataccgcg cccga
//
LOCUS       DATDHO010000228         6014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_454427, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000228 DATDHO010000000
VERSION     DATDHO010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6014
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454427"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..1512
                     /locus_tag="VIY07_04535"
     CDS             97..1512
                     /locus_tag="VIY07_04535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6513 domain-containing protein"
                     /protein_id="HEY6381054.1"
                     /translation="MTEHIAFLTGHLAQSRLEKVLVSMENPGFAWSVINVGVKVAALM
                     TGAIIERRLPRPLQASRVLVPGRCRADLDHLSAEFGIPFERGPDELKDLPAYFGKGGR
                     DLDLSRYDIRIFAEIVDAAALGVDTILSRARKMRAAGADVIDLGCIPDTPFPHLKDAV
                     RALRAENFAVSVDSAESEELRAGGLAGAQFLLSLNESTLDLAAETGTTPVLVPARHGD
                     LNSLLRAAEGAAKRGSKAILDPILDPIHFGFMASLAGYAELRRQLPEAEILMGTGNLT
                     ELMDADSGGVTAALLGICSELAIRNVLVVQVSPHTRRTLQEHDAARRIMLAAREDDSL
                     PQGYGSALLQLHDRKPFPNSAQEIAELAAQVKDGNFRIETAEDGIHVYARGIHHVGED
                     AFSLFPMLGVESDGPHAFYLGAELSKAEIAWRLGKRYIQDEPLDWGCAVERITEDLTR
                     LRAAGHTLRADGSREGDADDL"
     gene            1531..2133
                     /locus_tag="VIY07_04540"
     CDS             1531..2133
                     /locus_tag="VIY07_04540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF447 domain-containing protein"
                     /protein_id="HEY6381055.1"
                     /translation="MPLIRESIVITADREGRVHIAPIGLIAEDGDWIVAPFRPSTTLD
                     NLISVPFATANHTDDVRVFAGCLTGQHLWSTVASEEVPVPRLANALSHAELAVIDVKD
                     DPQRPRLRCRVVRFVSHMPFQGFNRAQAAVLEAAILVSRLHLLPREKIERDLAYLHTA
                     VEKTAGPREIEAWTWLAHKVAAHFASLSPPQAAGANDRAR"
     gene            complement(2147..2959)
                     /locus_tag="VIY07_04545"
     CDS             complement(2147..2959)
                     /locus_tag="VIY07_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY6381056.1"
                     /translation="MAPPGNAPGASQSQGPFELVDPKVFRVCADPHNLPYSDTNGAGF
                     ENKIAELFAKELGKGISFTWFPNAPGFVRQTLALYKCDIIMGMPQGDDIVQVTNPYYH
                     TAYTLVFRPGRGLDGVDTLTDPRLKDKRIGVVAGTPPATNLVLDGLLEKAKSYPLIVD
                     TRYDSSAVAMVNDIVDGTIDVGVLWGPLAGYYAKQSKEPLTIVPLLKETKGQRMTYRI
                     GMGVRYSDQNWKRQLNQLIRDKQAALTAILLSYGVPLLDESNHLIEPTPVTK"
     gene            complement(3077..3556)
                     /locus_tag="VIY07_04550"
     CDS             complement(3077..3556)
                     /locus_tag="VIY07_04550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome, methanol metabolism-related"
                     /protein_id="HEY6381057.1"
                     /translation="MSVVRAVADGSGDPKVVREDNGKYFDKSDTPTFKIDSDGTVDWY
                     TYSGFRRYHSDCHVCHGPDGEGSTYAPGLKDALKSISYGDFVGAIASGVKNVNTASEK
                     VMPAFGTNPNVMCYIDDIFIYLRARANDAVPRGRPAKRAEKPKVAEEAEIKCLGPAR"
     gene            complement(3724..5526)
                     /gene="xoxF5"
                     /locus_tag="VIY07_04555"
     CDS             complement(3724..5526)
                     /gene="xoxF5"
                     /locus_tag="VIY07_04555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008144226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lanthanide-dependent methanol dehydrogenase
                     XoxF5"
                     /protein_id="HEY6381058.1"
                     /translation="MRYLLLTSFAAAALVASSASGNEQLQKMSQNPKEWVMPTGDYAN
                     TRYSQLKQITADNVGKLQVAWTFSTGVLRGHEGGPLIIGDVMYVHGPFPNPVFALDLK
                     NDGKILWKYEPRQDPNVIPVMCCDTVNRGLAYADGKILLHQADTTLVALDAKTGKVVW
                     QSVNGDPKKGETGTSAPMVVKDKVLIGISGGEFGVQCHVTAYNLSDGKLAWRAYSVGS
                     DDQLLIDPQKTTELGKPVGASSSVKTWQGDQWKIGGGCTWGWMSYDPQLNLIYYGSGN
                     PSTWNPKQRPGDNKWSMTIFARDPDNGMAKWVYQMTPHDEWDYDGVNEMILADVDVGG
                     TTHKAVVHFDRNGFAYTLDRNNGALLVAEKYDPTVNWATKVDMDKNSKTYGRPLVVAQ
                     YSTEQTGEDKNTKGVCPAALGTKDQQPAAYSPDTKLFYVPTNHVCMDYEPFRVSYTAG
                     QPYVGATLSMYPPPGKKNMGNFIAWDAGKGKIVWSVPELFSVWSGALATAGNVVFYGT
                     LEGYLKAVDAKTGKELYKFKTPSGIIGNVTTYEHGGKQYIAVLSGVGGWAGIGLAAGL
                     TDPQAGLGAVGGYAGLRDYTSLGGQLTVFALPGS"
     gene            complement(5821..>6014)
                     /locus_tag="VIY07_04560"
     CDS             complement(5821..>6014)
                     /locus_tag="VIY07_04560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381059.1"
                     /translation="QCSCSIDIIATLLPYDRYVTAQTVLSLAQVPSRFGAMFRGPEPT
                     KEAVKNLRQAQAEAEVRCF"
BASE COUNT         1205 a         1772 c         1717 g         1320 t
ORIGIN      
        1 caataccgcc caattgaagt cgtttaaaga cgtcgtagtc gtagaaacgc tggcagagct
       61 tggtagcgag ctttcccggc gaaagcgcga actcacatga ccgaacatat cgccttcctc
      121 accggccatc ttgcccaatc gcggctggag aaggtgctgg tcagcatgga gaatccgggg
      181 ttcgcatggt cggtgatcaa tgtcggggtt aaggtcgcgg cactgatgac gggagcgatc
      241 atcgaacgcc gcctgccacg cccactgcag gcaagtcgcg tgttggtgcc tgggcgctgc
      301 cgtgccgacc tcgatcacct gagcgctgaa ttcggcattc ctttcgagcg cggccctgat
      361 gagcttaaag acctgcctgc ctattttgga aagggaggac gtgacctcga cttgtcccgc
      421 tacgacatcc gtatattcgc cgagatcgtt gatgcggcgg cactcggagt cgacaccata
      481 ttgagccggg cacgcaagat gcgtgcagcc ggtgccgatg tgatcgatct cggctgtatc
      541 ccggacaccc cgtttccaca tctaaaggat gcggtgcgcg ccctgcgcgc ggagaatttt
      601 gcggtcagcg tcgattcggc cgaaagcgaa gaacttcggg cgggcggatt ggcaggcgct
      661 cagttcctgc tcagtctcaa cgagagcacg ctcgatctcg ccgccgaaac aggaaccacg
      721 ccggtgctgg tgccggcgcg tcacggagac ctcaattcgc tcctgcgggc ggcagagggt
      781 gctgccaagc gcggcagtaa ggcgatcctc gatccaatcc tcgatcccat tcatttcggc
      841 ttcatggcct cgcttgcggg ctatgccgag ctacggcggc aattgcctga ggcggaaatc
      901 ctcatgggca ccggcaatct caccgaattg atggatgcag acagtggcgg cgttactgcg
      961 gcgctgcttg ggatttgttc cgagctcgcc atacgcaacg tgctagtggt gcaggtaagt
     1021 cctcacacgc gccgcacact tcaggagcac gatgctgcgc gccgtatcat gcttgctgcg
     1081 cgcgaggacg atagcttgcc gcagggctac ggtagtgcat tgctgcagtt gcacgaccgc
     1141 aagccttttc ccaatagcgc gcaggagatt gcggaattgg ctgcccaggt taaggacggg
     1201 aacttccgga tcgagacggc cgaagacgga attcacgttt acgcgcgggg catacaccac
     1261 gtcggtgaag atgcgttttc attgtttccg atgctcggtg tcgagagcga cggcccgcat
     1321 gcgttctacc tgggcgccga gctgtctaaa gcagagatcg cttggcgttt gggcaagcga
     1381 tatattcagg atgaaccgct cgattggggc tgcgctgtcg aacgcattac tgaagatctg
     1441 acccggctac gtgcagccgg ccatacgctc cgcgcggatg gttcgagaga aggcgatgcg
     1501 gatgatttgt aatgtcagga cctctttgcg atgccgctga ttcgagagag cattgtgatc
     1561 accgccgatc gtgaaggccg cgttcacatt gcgccgatcg gactgattgc agaggacggc
     1621 gactggatcg ttgccccgtt tcgcccctcg actactctcg acaatcttat ctcagtccca
     1681 ttcgctactg cgaaccatac cgacgatgtg cgcgtattcg cgggctgtct caccggccag
     1741 cacctttggt ccacggtggc gtccgaggag gtgccggtgc cacgcctagc gaatgcgctg
     1801 tcgcacgccg aacttgcggt cattgacgtc aaagacgatc cgcagcggcc ccgattgcgc
     1861 tgtcgggttg tccgtttcgt ttcccatatg ccatttcaag gcttcaatcg cgcccaggct
     1921 gcagtgcttg aagccgcgat cctggtaagc cgtcttcacc tgctgccgcg tgaaaaaatc
     1981 gaacgcgatt tggcgtatct ccacactgcc gtcgaaaaaa ctgctgggcc gcgcgagatc
     2041 gaagcctgga cctggctggc gcacaaagtc gccgcgcatt ttgccagcct gtctcctcca
     2101 caggccgcag gggcgaacga ccgggcgcgg tgaatcctcg cccgctctac ttcgtgactg
     2161 gagtcggttc gatcagatgg ttgctctcgt cgagcagcgg aacgccatag ctcaatagga
     2221 tcgcagtgag agcggcctgc ttgtcccgaa tgagttgatt gagctggcgc ttccaattct
     2281 ggtcggagta acgcacaccc atgccgatgc gatacgtcat tcgctgcccc tttgtctctt
     2341 taagcagcgg cacgatcgta agcggctcct tagattgctt cgcgtaataa cctgccaatg
     2401 ggccccacag cactccgaca tcgatggtcc catcaacgat gtcattgacc attgccaccg
     2461 cggacgaatc ataccgcgta tcgactatga gcgggtacga cttggctttc tcgaggaggc
     2521 cgtcgagcac cagattggtt gcaggcggag tgccggcgac cacgccaatt cgtttgtcct
     2581 tgagccgcgg atccgtgagc gtgtcgaccc catccagccc gcgacccggc ctgaaaacca
     2641 aagtatacgc ggtgtggtaa tatgggtttg taacctgaac gatgtcatcg ccttggggca
     2701 tgcccatgat gatgtcgcac ttgtagagtg ccagtgtttg tctcacaaaa cctggggcgt
     2761 ttgggaacca cgtgaaagat atgcctttgc ccaattcttt cgcgaataat tcggcaatct
     2821 tgttttcaaa accggcgcca ttcgtgtcgg agtagggcag gttgtgtgga tctgcacata
     2881 ctctgaacac tttaggatca accagctcga atggaccctg cgattgcgat gcgcccggtg
     2941 cgtttcctgg cggggccatt tgcgcgaacg ctatggtgcc agcgaacaca gccgcacctg
     3001 cgcaaattac cagacgaatc caaagcatca tgccacgcaa ctcacgatca tctgcttgaa
     3061 tggcgtcgac ttgcgctcag cgcgcaggac ccaagcattt aatttcggcc tcttctgcca
     3121 ctttcggctt ctcagcacgc ttcgcggggc gcccacgcgg gacggcatcg ttggcgcgcg
     3181 cacgcaagta gataaaaata tcgtcgatat aacacatgac attcggattg gtcccaaatg
     3241 cgggcatcac tttctcggat gccgtgttaa cgtttttaac cccgctcgct attgccccga
     3301 cgaaatcgcc atagctgatc gatttgagtg cgtccttgag cccaggcgca taagtcgagc
     3361 cttctccatc aggcccgtgg cagacgtggc aatccgaatg ataacggcgg aaaccggagt
     3421 aggtgtacca gtccacggtg ccatcactgt caattttgaa agtcggggta tcgctcttgt
     3481 caaaatactt gccgttatcc tctctcacca ccttcggatc gccagagcca tctgcgaccg
     3541 cgcgaacaac gctgatgcca agcgccaccg cgacgaatag cgcaagcgca aaactaagtg
     3601 gtttcacgga gtttcctctg tgatttcgca tcgcccgatg gcttgcggtt ttttacaatc
     3661 gaacccgggg cgctgccaaa ggcgacgccc cgggtccact gtgccaattc tgcgtgccgg
     3721 actttaactt ccaggcagcg caaataccgt gagctggcca ccgagcgaag tgtaatcgcg
     3781 caagccagcg tagccaccga cggcgccgag accggcctgc gggtcggtta agcccgcagc
     3841 gagcccaatg cccgcccagc cgccgacacc cgacagaaca gcaatgtatt gcttgccacc
     3901 gtgctcgtag gtcgtcacgt tgccaatgat gccggacgga gtcttgaatt tataaagttc
     3961 cttgcccgtc ttggcatcca cggctttcag ataaccttcc aacgtgccgt agaacaccac
     4021 gttgccggca gtcgccagag ctccggacca cactgagaac agctctggga ccgaccatac
     4081 aatcttcccc tttccggcat cccaggcgat gaagttgccc atgttcttct tgccgggagg
     4141 tggatacatc gacaacgttg ccccgacata gggctgccct gcagtgtaag aaacgcggaa
     4201 gggctcgtag tccatgcaga catggttagt cggtacatag aaaagcttcg tatccggcga
     4261 atacgccgcc ggctgctgat ccttggtacc cagcgcggca gggcacacgc ccttggtgtt
     4321 cttgtcttcg ccggtctgct cagttgagta ctgtgcgacg accaacgggc gaccgtaggt
     4381 cttcgaattc ttgtccatgt cgaccttggt ggcccaattc accgttgggt cgtatttctc
     4441 ggccaccagc agggctccat tattgcggtc gagggtgtag gcgaagccgt tgcggtcgaa
     4501 gtggactact gctttgtgag tcgtgccacc gacatcgacg tcggcgagga tcatctcgtt
     4561 gaccccgtca tagtcccact cgtcgtgggg cgtcatttga tagacccact tggccatgcc
     4621 gttgtcaggg tcacgggcga agatcgtcat cgaccatttg ttgtcgcccg gcctttgctt
     4681 tggattccag gtcgaaggat ttcccgagcc gtaataaatg agattcagct gcgggtcata
     4741 ggacatccag ccccaggtgc atccgccccc gatcttccat tgatcgccct gccaagtttt
     4801 gacactcgag cttgctccaa ccggcttgcc gagttcggtt gtcttctgag ggtcgatcaa
     4861 gagctgatcg tctgatccta ccgagtaggc tcgccacgcc agtttgccgt cgctgagatt
     4921 gtatgcagtc acgtggcact gcacgccgaa ttcgccgccg gatataccga tcaggacctt
     4981 gtccttcacg accatcggcg ccgacgtccc ggtttcgcct tttttgggat cgccgttcac
     5041 ggattgccac accactttac ctgtcttggc gtctagcgcg accaacgtgg tatcggcctg
     5101 gtgcaggaga atcttaccgt ccgcgtaggc caagccgcga ttgacggtat cgcagcacat
     5161 cacgggaatg acgttcgggt cctgtctcgg ttcatatttc cagaggatct tgccatcatt
     5221 cttgagatcc agcgcgaaaa ccggattcgg gaagggccca tggacgtaca tgacgtcgcc
     5281 aatgatcaac gggccgcctt cgtgaccgcg caatacgccg gtcgagaaag tccacgcaac
     5341 ttgcagcttg ccgacgttat ccgccgtgat ctgcttaagt tgcgaatagc gtgtatttgc
     5401 gtagtccccc gtgggcatca cccactcttt tgggttctgc gacatttttt gcaattgctc
     5461 gttgccgctc gctgaagaag caactagagc ggctgcggca aagctggtta aaagcagata
     5521 acgcatccgt gtcctccctg cgaaattgtc gcgggttgac cggcgcaaca gcacttaacg
     5581 tgccgcgtgt cggcacccgt gcattgggaa gcgcttccgg cagcgtgtca cagcgcagcg
     5641 tggcatctgg ggcatttcgc aagatgcccc gcgtagctta cgaaaagcgt cagtattccc
     5701 gttcgactgg cgcccttgaa gccggaaacc gaggtgaagt ctatgcttgc gtcctacggg
     5761 ccgcaactaa aaaacatgta cgggacatcg cggcaggtac cgggaattac caccgtgcaa
     5821 tcagaagcag cgcacctctg cttcggcttg cgcctgccgc aaatttttaa ctgcctcttt
     5881 tgtcggctcg ggccctcgaa acatggcgcc aaaccgactg ggaacttgcg cgaggctcag
     5941 cacagtttgc gccgtcacat aacggtcgta ggggagtagc gtggcgatga tgtcgataga
     6001 gcaggaacat tgtc
//
LOCUS       DATDHO010000229         4654 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_10264, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000229 DATDHO010000000
VERSION     DATDHO010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4654
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10264"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..739)
                     /locus_tag="VIY07_04565"
     CDS             complement(<1..739)
                     /locus_tag="VIY07_04565"
                     /inference="COORDINATES: protein motif:HMM:NF019349.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HEY6381060.1"
                     /translation="MAMSRTALRQPVTMSGDLTARIMFAGRSSSMSAQIVAWVRDALF
                     AKQLKPGDFLGTEKDLAARFGASRIVARDALRTLEALGIVEIRMGKGGGARIAQGNPR
                     LFAEALAVQLDLTGVTAAEIMDAQRAIETLGAELAAENATPDDIARLRRLLREAEDAM
                     SDLDLFTRLSRDFHLAVAEASHNRVLVVQLISLEHVSWPRRNVTATAKLAEHILEVHA
                     KLTDLIEMRDAAAARALMDDHVKMIRAR"
     gene            950..1153
                     /locus_tag="VIY07_04570"
     CDS             950..1153
                     /locus_tag="VIY07_04570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381061.1"
                     /translation="MRERRSLVADHIAGIVLGTTLFVFLPAFVIAGAIDCASTKPGLH
                     CALVQFVLDDGPAGPILGQEKSD"
     gene            1411..2907
                     /locus_tag="VIY07_04575"
     CDS             1411..2907
                     /locus_tag="VIY07_04575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381062.1"
                     /translation="MALFVALILLISIPIWTHPLPPLSDYVNHLARMQVISELSHNHP
                     IAMFYELNWQVIPNLAMDIIVPPLARVMNVYLAGQVFLVLTFVVIVSGILMLNRALIG
                     RFSVLPLFAIPLLYNYVFLVGLMNYIFGIGVAIWALAGWIAVRERAWPIRFALASAFV
                     VILFFCHLSALGIYGIGLLSFELMRLWERRLEPWPRRIAEFFLSGLPFLIVVPLLYAS
                     PTMQLVVATSWEQRGKLDGLIYVIANYSDIAAFILVGIMVACTVWAIRHRVLRFHRLA
                     VVMLVVGGIVYFALPRVMFDTYMTDQRVPVGLAFMLFACGDLDVRRRFVRRGFVIVLL
                     VLIAGRLLEIDYNWSQLSDSTSEFRSSVRRIAPGSKVFVAYSSATSGEDVRDLGLVHA
                     ACIATIERAALVTTLFSVDGKQVIHVRPEYRDYADIHDGTPPSTAQLLLAAEHPLPNV
                     PTFWRNWPKFDYLYILFTEDDAPNPDPSRLRLVADGDRFQLYKIIKTQ"
     gene            complement(2964..>4654)
                     /locus_tag="VIY07_04580"
     CDS             complement(2964..>4654)
                     /locus_tag="VIY07_04580"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY6381063.1"
                     /translation="DRIDRRLAAIFAGDIAGYSRLMSIDEEGTLRQLKGHRKELVDPK
                     ITEHRGRIVKTTGDGMLVEFASVVDAVRCAVDIQRGMGERNANVPAEKRIQFRIGLNV
                     GDTDPSGIMVSRVVHDQVQDKLGFEFDDMGEQSVKNIARPVGVHRIQLTGQVAPAKVA
                     INTAERTTSDRPSIAVLPFVNMSGDPEQEYFADGISEDIITGLSKLRWFFVIARNSSF
                     AYKGKAVDVKRAARELGVRYVLEGSVRKGGSRVRITAQLIDAATGNHIWADRYDGELT
                     DVFALQDEITCKVVAAIEPKLLEAEGIRSQNRSAEDLGAWDLVIQANSLFWRLNRSEG
                     DAAVAILRRAVERYPDYGPAHSMLAFMLLLSQLTGWNREESTGRQAATLAKRAAELDD
                     SDPWAHMALGYLAFSMRRTDEAVEEFRRALDLNPNFAAAHGYLAFALAMDGRSDEAIP
                     HCEQAIQMSPHDPQNAIFNTAIAVAHYLAGRYPEAIVFGRKALQQRTQFTSGHRIYVA
                     SLAQAGQIDEARESLKQLKEMFPEMTIAWIEHYVPYTPRTMPKFLEGMRKAGLE"
BASE COUNT          873 a         1361 c         1324 g         1096 t
ORIGIN      
        1 gccgggcgcg gatcatcttg acgtggtcgt ccatcagcgc gcgcgccgcg gctgcgtcgc
       61 gcatttcgat gagatcggtg agcttggcgt gaacctccag aatgtgctcg gccagctttg
      121 ccgtggcggt cacgttccgc cgcggccagg aaacgtgctc gagcgagatg agctgcacga
      181 ccaggacccg gttgtgggag gcttcagcga ccgcgaggtg aaaatcgcgt gacaggcgcg
      241 tgaacagatc gaggtcgctc attgcgtcct cggcctcgcg caacaaccgg cgcaatcttg
      301 caatgtcatc cggagtcgcg ttctcggcgg cgagctcggc gccaagggtc tcgatcgcgc
      361 gctgcgcgtc catgatctcg gcggcagtga cgccggtgag gtcaagctgc accgccagcg
      421 cctcggcgaa cagccgcgga ttgccctgtg caattcgcgc gcccccgccc ttgcccatgc
      481 ggatctcgac aatcccgagc gcttccagcg tgcgcaatgc atcgcgcgcg acgatgcggc
      541 tcgcgccgaa gcgagccgcg agatccttct cggtgccgag gaaatcgccg ggcttgagct
      601 gcttggcgaa caaggcgtcg cgcacccagg cgacgatctg cgccgacatg gaggacgagc
      661 ggccggcaaa cataatgcgg gcggtgagat caccgctcat cgtcaccggc tgccgtaacg
      721 ccgttcgtga catcgccatg ccttttgctg acagggagaa gtatggcgga gccaattaaa
      781 atagtaaaga tactatcttt ataaaattct ctagtgtgca caatcagtta ctgagccagc
      841 ccgcggaaca atcggactca gctatcaaag caagcggtct ttgcggccgc ttgccgatgt
      901 aaaatttaag gggtgatgtc ataggttacg cgttggcgtg ggggccagta tgcgtgaacg
      961 tcgttcgctt gttgcggacc atattgccgg catcgttctt ggcacgacgc tttttgtatt
     1021 tcttcccgca ttcgtcattg ccggggccat cgactgcgcc agcacaaagc ccggccttca
     1081 ttgcgccctg gtgcagttcg tccttgatga cggccctgcc ggcccgatcc ttgggcagga
     1141 gaaatctgac taacctgcga agcgggcgac ccgacaacga ttattcgatc acttcgtccg
     1201 caaaaaaatt agcgtcaaaa cgccataatc gacccacacc tgctcggaaa atgcgcacgc
     1261 cggtttgagt cggaactcag acattcattc cttattcagg cgcaatcaat ttaaagacgt
     1321 caagaactca tgctttggaa aaaccaacca gacgtttcga agaaaaaacc tgcgcggtcg
     1381 cgagcgcctg atttttcggt ctcgcaggtc atggcgctgt ttgtcgcctt gatattattg
     1441 atatcgattc cgatctggac gcacccactg ccgccgctgt cggattacgt gaaccatctc
     1501 gcgcgcatgc aggtgatttc agagttgtcg cacaatcatc cgattgcaat gttctacgaa
     1561 ctgaattggc aggtgatacc gaatttggcg atggacatca tcgttccgcc cctggcgcgt
     1621 gtgatgaatg tctatctcgc cggtcaagta tttctggtgc tgactttcgt ggtcattgtt
     1681 tccggcattc tcatgctgaa ccgcgcgctg atcgggcgat tctccgtcct gcccctgttc
     1741 gcgattccgt tgctctacaa ttacgtgttt ctcgtcggat tgatgaatta catattcgga
     1801 atcggcgtcg cgatctgggc actggcggga tggattgccg tgcgcgaacg ggcttggccg
     1861 ataagatttg cgctggcctc ggcattcgtc gtcatcctct tcttctgcca tctgtcggcg
     1921 ctcggcattt acgggatcgg tttgctttcc ttcgagctta tgaggctgtg ggaacggcgg
     1981 ttagaaccat ggcctcgcag gatcgcggaa tttttcctga gcgggctgcc gtttctgatc
     2041 gtggtgccgc ttctatacgc cagtccgacc atgcaactcg tcgtcgccac ctcgtgggag
     2101 cagcgtggca agctcgacgg cttgatatat gtcatcgcca attactcgga tatcgccgcc
     2161 tttatcctgg ttggaatcat ggtcgcctgc acagtgtggg cgatccgcca tcgtgttctg
     2221 agatttcatc ggctggcggt ggtcatgctc gtcgtcggag gcatcgtcta ttttgcgctg
     2281 ccccgcgtca tgttcgacac ctatatgacc gaccaacggg taccggttgg ccttgccttc
     2341 atgctcttcg cctgcgggga tctggatgta cgccgccgct ttgtgcggcg aggcttcgtg
     2401 atcgtccttc tggtcttgat tgccggccgg ctgctcgaga tcgactacaa ctggtcgcag
     2461 ttgtcggatt cgaccagcga attccgctcc tccgtgcgcc gcattgcgcc aggctcgaaa
     2521 gtctttgtgg catactcaag cgccacatcc ggcgaagacg tgcgcgatct tggtctcgtt
     2581 catgcggcct gcattgcgac aattgagcgg gccgcgctgg tgaccacgtt gttcagtgtc
     2641 gatgggaagc aggtcatcca tgttcgcccc gaatatcgcg actatgccga tattcacgac
     2701 ggcactccgc cttcaaccgc gcaacttttg ctggcggccg agcatccgtt gcctaatgtg
     2761 cccactttct ggcgaaattg gccaaaattc gattatctct acattctttt tacggaagat
     2821 gatgcgccga atcccgatcc atcgcgtctg cgcctcgtag cggatggcga tcgctttcaa
     2881 ctctataaaa taataaagac gcagtagcgc tgtacgttgc gttgttcagt ggcccggtca
     2941 ccgggttgaa aagcaatccg ttcttattcg agtcccgcct tgcgcatgcc ttccaggaac
     3001 tttggcattg tcctgggcgt gtagggaacg tagtgctcta tccaggcaat tgtcatttct
     3061 ggaaacattt ccttcaattg tttcagcgat tcgcgcgctt catcgatctg tcccgcctgg
     3121 gcgaggcttg caacatagat tcgatgacct gaagtaaact gagtgcgctg ctgcagcgcc
     3181 ttgcgcccaa atacaattgc ttcggggtag cgaccggcga gataatgtgc gaccgcgatt
     3241 gccgtgttga aaatagcgtt ctgcggatcg tgcggactca tctggatggc ttgctcgcaa
     3301 tgtgggatcg cctcgtccga gcgaccatcc attgcgagcg cgaacgccag ataaccgtgt
     3361 gctgctgcga aattcggatt gaggtcgagc gcgcgccgga attcctctac ggcctcgtca
     3421 gtgcgccgca tggaaaaagc cagatagccg agagccatgt gcgcccatgg atcgctgtcg
     3481 tccagctctg cggctcgctt ggcaagcgtt gccgcctgcc tccccgtcga ctcttctcta
     3541 ttccaaccgg tgagctgcga caacagcagc atgaatgcca gcatactgtg tgctgggcca
     3601 tagtcggggt aacgctcgac tgcgcgccgg agtatggcaa ccgcggcatc gccttcggac
     3661 ctgttcagtc gccagaacaa cgaattggcc tggatcacca ggtcccacgc accgaggtct
     3721 tccgctgaac gattctgcga gcgaatgcct tcggcctcca gcaatttcgg ctcgatcgca
     3781 gcaacgacct tgcaggtgat ctcgtcctgc agcgcaaaga cgtcggtgag ttcgccgtcg
     3841 tagcgatcgg cccagatatg attgccggtc gccgcgtcta ttagctgggc cgtgatgcgt
     3901 acccgacttc cgcctttgcg tacgcttcct tccagcacgt agcgaacacc gagttcgcgc
     3961 gcggctcgct tcacgtcgac agctttgcct ttgtaggcga acgaagaatt gcgtgcgatg
     4021 acgaagaacc agcgaagctt cgacaatccc gtaataatgt cttctgaaat tccgtccgcg
     4081 aaatattcct gttccggatc tccgctcatg ttcacgaatg gaagaaccgc gatcgatggt
     4141 cgatcggagg tggtccgttc tgccgtattg atggctacct tcgccggggc cacctgtccg
     4201 gtcaattgta tcctgtgaac cccgaccggc cgcgcgatgt tcttgacgct ctgctcgccc
     4261 atatcgtcga attcaaagcc gagcttgtcc tgcacctgat catggacaac tctcgacacc
     4321 atgatgccac tagggtcggt gtcaccgaca ttgaggccta tgcggaactg gatacgcttc
     4381 tcagcgggga catttgcatt gcgctcgccc atgccgcgct ggatatcgac ggcgcagcgt
     4441 actgcgtcga cgacactggc aaattcgacg agcatgccgt cgccggtagt tttgacaatg
     4501 cggccgcgat gttcggtgat cttggggtcg acgagctcct tgcgatgccc tttgagctgg
     4561 cgcagcgtgc cttcctcatc gatgctcatc aagcggctat agccggctat atcgccagca
     4621 aagattgccg cgagcctgcg gtcgatccgg tctt
//
LOCUS       DATDHO010000230         2699 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_158886, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000230 DATDHO010000000
VERSION     DATDHO010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_158886"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(95..1423)
                     /gene="clcA"
                     /locus_tag="VIY07_04585"
     CDS             complement(95..1423)
                     /gene="clcA"
                     /locus_tag="VIY07_04585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="H(+)/Cl(-) exchange transporter ClcA"
                     /protein_id="HEY6381064.1"
                     /translation="MSFSSEPGTDEAEGQSGLVTLGALSLLVGAVAGLVTAVFRLALD
                     HADSFRDALIAWAHGWHFAGFLFVIATCAAAVAVAAWLVRRYSPYASGSGIPHVEAVL
                     KGDLRQVPYRLIWVKFCGGLLAIGSGLALGREGPSVQMGASLANLLGEVFRRNENDCR
                     ALLAAGAGAGLATAFNAPIGGAVFVLEELTRRFDTRITIATLGASAGAIAVARVLLGD
                     TPDFLVEPIPYPSFGTLPIYLTLGIIAGCLGVAYNRAILATLAVAERLREWPVEARAA
                     VVGAAVGLLAWFVPAVVGGGDALTQRTLAGAETVATVSVVFLVRFALGPLSYAAGTPG
                     GLFAPILVLGAQSGFLFANVSYPWVPAITPTSTALAVVGMAAFFTAVVRAPLTGIILV
                     IEMTASFTLFLPMLGACFAAMLVPIVLRNAPIYDSLRERTLKGNRMASVA"
     gene            complement(1441..1842)
                     /locus_tag="VIY07_04590"
     CDS             complement(1441..1842)
                     /locus_tag="VIY07_04590"
                     /inference="COORDINATES: protein motif:HMM:NF024879.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper domain-containing protein"
                     /protein_id="HEY6381065.1"
                     /translation="MAQHERQVPNSRPVKIHLRNTMKCTCTIVLVIFLGTSFLGCSEP
                     LTTREKGAGIGTLAGASLGGVIGSATGHAGAGAGIGAAIGLIGGALIGDQVQERQKQQ
                     QELQQQMAEQQAELDRVSQELQQLKQAQQAR"
     gene            complement(1909..2673)
                     /gene="tpiA"
                     /locus_tag="VIY07_04595"
     CDS             complement(1909..2673)
                     /gene="tpiA"
                     /locus_tag="VIY07_04595"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003498915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEY6381066.1"
                     /translation="MNKERKLIIAGNWKMNKTVAEALALVQDLKMELANVTEVDIVVC
                     PPFTALCEVAKALRDSNIRLGAQDMSQHNPGAYTGEIAAEMLKELGVRYVILGHSERR
                     QYQKESDELISKKARAAHTASLQPIICVGETLAEREAGQMKQVLEIQVGGSLTGLSKE
                     QMAETIIAYEPVWAIGTGKTATTAQAQEAHAFIRGLLVKLFDEATARRVRIQYGGSVR
                     PSNARELMSQPDVDGALVGGASLEARSFAEIVKNSI"
BASE COUNT          582 a          835 c          743 g          539 t
ORIGIN      
        1 aatgaccttc gaacaccaag caaaaggctc ctttggttct tcgatcattt cgagggttat
       61 cgcgttgagt caattcgaac gtcgaaccac gtcttcacgc gacactagcc atccgatttc
      121 cttttagagt gcgctcccgc aatgaatcgt agataggcgc attgcgcagc acgatcggca
      181 ccagcatagc tgcaaagcag gcgcccaaca tcggtaaaaa cagggtgaag ctggccgtca
      241 tctcgatgac taaaatgata ccggtaaggg gtgcgcggac gacggctgta aaaaacgccg
      301 ccatcccgac aacggcgagc gccgtcgagg tcggtgtaat ggctggaacc catgggtaag
      361 agacatttgc gaagagaaag ccgctttgtg ctcccaacac aaggatgggg gcgaacaatc
      421 cgccgggagt tcccgctgca taggacaagg ggccaagcgc aaaccggacc aaaaaaacaa
      481 ccgacaccgt ggccacggtt tccgcgccgg cgagggtccg ttgggtaagt gcgtcgcccc
      541 cgccaaccac ggcagggacg aaccaagcca gaagtcccac cgccgcacca accaccgcag
      601 cacgcgcttc taccggccac tcacggagtc gttctgcgac cgccagcgta gcgaggatgg
      661 cacgattgta tgcgactcct agacatccgg cgataatgcc aagcgttagg tagatcggca
      721 gtgtgccgaa gctggggtag ggtatcggtt cgacaaggaa atcaggggta tcgcccaaga
      781 gcacacgtgc caccgcgatg gcacccgcgg aagcgccgag cgtcgcgatg gtgatgcggg
      841 tatcgaaccg gcgtgtcaat tcctcgagca cgaacacagc accgccgata ggggcgttga
      901 atgccgtggc tagaccggca ccggcgccgg cggctaaaag cgccctgcag tcattctcgt
      961 tgcgccggaa gacttctccc aggagatttg ccagacttgc tcccatctgc acgctcggcc
     1021 cctcgcgacc gagcgcgagg ccggatccga tggcgagcag accgccgcag aactttaccc
     1081 atatcaatcg gtaaggcact tgccgcaagt cccctttcag gaccgcctcg acgtgcggaa
     1141 taccgctgcc ggaggcgtag ggcgaatacc ggcgaactag ccatgccgca acagcaaccg
     1201 cggcagcaca ggtagcgatc acgaacaaga aacctgcgaa atgccagcca tgcgcccacg
     1261 caatcagcgc atccctgaaa ctatctgcat ggtcaagcgc gagccggaat actgcagtca
     1321 ccaaacctgc gaccgcgccg acgaggagcg acaacgcccc gagggtcacc aacccgcttt
     1381 gtccttccgc ttcatcagtg ccaggttccg atgaaaagct cacagttttt ccccggctct
     1441 ctagcgcgct tgctgtgcct gtttaagttg ctgcagctct tgtgataccc gatcgagctc
     1501 ggcttgctgc tcggccattt gctgctgcag ctcttgttgc tgtttttgcc gctcttgcac
     1561 ctggtcacca atcaaagccc cgccgatcaa accgatggcg gcgccgatac cggcgcccgc
     1621 cccggcatgt ccggtagcgc taccgatgac gccaccaagg ctggctccgg caagcgtccc
     1681 gattccggcg cccttctccc tggtcgtcaa cggctcagaa caaccgagaa aggacgtccc
     1741 taaaaaaatt actaggacga tcgtgcaagt gcatttcatg gtgttcctca aatgaatttt
     1801 gaccgggcgg gagttgggaa cttgccgttc gtgttgcgcc atttgaggat ttcaactttg
     1861 cattcacgct cggccacacc atggcgataa aaaacgctgc tgcgtttttc aaattgaatt
     1921 tttgacgatc tcagcaaagc tccgggcctc aagggacgcg ccgcccacca gggcgccgtc
     1981 cacatccggt tggctcatca attcccgcgc gttggatggc ctgacactgc cgccatattg
     2041 aatgcgaacg cgccgggcgg ttgcttcatc aaacagcttc accagcaagc cgcggatgaa
     2101 agcatgcgct tcctgcgcct gggcagtcgt ggccgtcttg ccggtgccga tcgcccagac
     2161 cggttcgtaa gcgataatgg tctcggccat ctgctctttg ctcaggccgg tcagacttcc
     2221 gcctacctgg atttccagca cttgcttcat ttgtcccgct tcacgttccg cgagtgtttc
     2281 gccgacgcaa ataatcggtt gcagagatgc ggtgtgggcc gctcgcgctt tttttgaaat
     2341 cagctcgtcg gattcttttt gatactgacg ccgctcggag tggccgagga taacgtagcg
     2401 cacgccgagc tctttcagca tctccgccgc gatctcgccg gtatacgcgc cgggattgtg
     2461 ctggctcatg tcctgcgcgc cgagacggat attagaatcg cggagggctt tggcaacttc
     2521 gcacaacgca gtgaacggcg gacagacgac gatatccact tccgttacgt tcgccagctc
     2581 catttttaaa tcctgcacca aggccagcgc ctcggcgacg gttttgttca tcttccagtt
     2641 tccggcgata atcaacttgc gttctttatt catgatccaa ctcctcgaaa agtatcaac
//
LOCUS       DATDHO010000231         6010 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_454578, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000231 DATDHO010000000
VERSION     DATDHO010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6010
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_454578"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..905
                     /locus_tag="VIY07_04600"
     CDS             <1..905
                     /locus_tag="VIY07_04600"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY6381067.1"
                     /translation="NAESIARRLEPRLKAFVQFERAPTTPWSAVLAGMPYAAKDQFVS
                     ATRMPHGGLAQPLPMTNIPNATVLDLFDRAGARRIGYTAMTELAYEPSGYNSHHGHVG
                     NPWNPEFISGGSSSGSAAAVASGSVVVALGSDTGGSLRIPAHCCGITAWKPTYGAVST
                     LGAMPLATSLDTIGLLARSASDMRVAARILYERSDGSEPIGKVAVVTDALALADGPIA
                     AACRNAIEAIAGCGVEIGQRDALAAIESLDPHAGGGSTSTPGADDTWRAGSGSRKATG
                     QGGHNRRRNSKGQRVGTPAAGAGF"
     gene            871..1257
                     /locus_tag="VIY07_04605"
     CDS             871..1257
                     /locus_tag="VIY07_04605"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY6381068.1"
                     /translation="MSARPQLVLDFDANVFQNDGALALPVLAIRTPKTTECDPRSPLF
                     NARTLYELSHLTRFANLLGLPVVAFPAGFDDRGVPVALQVVGRPGSDHALIALAAAVQ
                     DRTGWHSHLPAAVSDLVTISNDGSPL"
     gene            1254..2447
                     /locus_tag="VIY07_04610"
     CDS             1254..2447
                     /locus_tag="VIY07_04610"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY6381069.1"
                     /translation="MSASRPSAALANLRVLDLTRARAGPTCCRILGDFGADVIKIEAP
                     PGVDPNEGMSGARDGSDMLNLHRNKRSLTLNLKEKTGHDIFLRLVRHADVVVENFRPD
                     VKDRLGIAYEALSAVNPRVILASISGFGQSGPYRTRAGFDQIAQGMGGLMWVTGMPGG
                     GPVRAGIAVADMSAGVYAATGILIALAERERSGRGQWVQTSLLEAQIALMDFQAARYL
                     IDGIVPGQAGNAHPYSTPMGVFETSDGFINIGVGGDGQWRALCVALERPDLGKAPEYA
                     TLDLRFRNRPKLTAILSEIFKTKSSSYWLDELEQQGVPAGPIYRLDEVFADPQVEHLG
                     IAAPLHHPTRGDIRVVGQPIGLSRTPAIVETTLAGLGADTDEILRDAGYSRAEIADFH
                     ARKIV"
     gene            2457..3341
                     /locus_tag="VIY07_04615"
     CDS             2457..3341
                     /locus_tag="VIY07_04615"
                     /inference="COORDINATES: protein motif:HMM:NF013255.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6381070.1"
                     /translation="MADDVTLITGASGFLGHAIIKLLAQDGRRAIGLDPVPSATADII
                     DDLSDRARLKALLADKRVSHIVHAGGVSGPMVMPDDPIGVIAINVAGSLNLLRAATES
                     GVKTFIYCSSVSALGNFYESEPVGEDYPLRPGSTYGASKAAMDMVLRGLWGRIPMDLC
                     SLRFTAIYGPGRQTVFTVETIINAALAGKVARIEPMTDWPYIYIDDAAQAAVSACFAK
                     GRRQLSYFIAHPEKVTPDDIAAAAAAAGKPVRLEIDGSKPVGSRGPVDTHAAERDFGF
                     RARVGHREGIRRMIEAAR"
     gene            3407..4285
                     /locus_tag="VIY07_04620"
     CDS             3407..4285
                     /locus_tag="VIY07_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6381071.1"
                     /translation="MAHLTTDDGIKLYYEETGKGIPVVFIHEFAGDCRSYEQQVRHFS
                     KYYRCVTFNARGYPPSDVPKDGERYSQERARDDIRSVLDALRIDKAHIVGLSMGGFAA
                     LHFGFTYPDRCRSIVVAGCGYGAAPGERAKFAEEAEASAKRFEELTMKKAAEAYALGP
                     TRVQHQNKDPRGWREFADQLAEHSTEGSALTMRGVQKRRPSLFDLVDKMKTLTVPTLI
                     MTGDEDWPCLEPGILMKKNIPTAGLVVMANCGHNINLEEPALFNAHLSDLFQAADAGA
                     WPKRDPRAMAGTILGR"
     gene            complement(4291..5061)
                     /locus_tag="VIY07_04625"
     CDS             complement(4291..5061)
                     /locus_tag="VIY07_04625"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6381072.1"
                     /translation="MTSGDYSLAGKSAVVTGAGNGIGRAIALAFAQAKANVACIDIDA
                     KAAEATAAATANKGVKALAVRCDVAGEADVEAAAKAILQKFPAIHILVNGAAGYDPNG
                     TVLDLTVSDWNRVFAVNVGGAFLMSRAILPAMIAAGGGSIIHIASQLGSVAAPRRAAY
                     CATKGALIQLAKAMATDHAAQKVRVNTLSPGAVETERLVKRFGDMETARRTAGPKHLL
                     QRLGQPEEIARAAVFLASDASSFMTGADLLVDGGYNAT"
     gene            complement(5071..5805)
                     /locus_tag="VIY07_04630"
     CDS             complement(5071..5805)
                     /locus_tag="VIY07_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381073.1"
                     /translation="MSVLLSTEKLELAYGQVSVCRDISLSIEAGEIVALIGANGAGKS
                     TTLRAVAGVLAPRRGSIVFCGRDITSMASHERTNLGIALVPEGRRVFPFLTVRENLEL
                     GAFKNRKDNAKIRRMIGDVFDMFPRLSERSGQNAGTLSGGEQQMLALGRAMMSEPQLL
                     CLDEPSLGLAPIVVQDIFRTIRAINAAGTSVLLVEQNARYALETASRGYVLQTGSVIA
                     SGTCVDLKQNPRVQEAYLGRIAPALS"
     gene            complement(5802..>6010)
                     /locus_tag="VIY07_04635"
     CDS             complement(5802..>6010)
                     /locus_tag="VIY07_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381074.1"
                     /translation="VDVLLDRIRTLRSRGITVVVVEHNMDLVMNVADRIMVMDYGRHL
                     FQGTPSEVQKNPAVIAAYLGGELS"
BASE COUNT         1149 a         1848 c         1845 g         1168 t
ORIGIN      
        1 caaacgcgga aagcatcgcg cgtcggctag aaccaaggtt gaaagcgttc gttcaatttg
       61 aacgtgcacc gacgacaccg tggtctgcgg ttctcgctgg catgccgtat gccgctaagg
      121 accagtttgt ttcggcgacg cgtatgccac atggcggcct cgcccagccg ctgcctatga
      181 cgaacattcc gaacgcgact gtgctcgatc ttttcgatcg cgccggcgca aggcgcatcg
      241 gctacacggc gatgacagag ctcgcctatg agccgtccgg ttacaactcc caccatggtc
      301 atgtcggcaa tccatggaat ccggaattca tttccggcgg ctcttcatcg ggctcggcgg
      361 ctgctgtcgc cagcggttcg gtcgtcgtcg cactcgggtc cgacaccggc ggctcactgc
      421 gcatcccggc gcattgttgc ggcatcaccg cgtggaagcc gacctacggc gccgtttcaa
      481 ctctcggagc aatgccgctg gcgacgagcc tcgacaccat cggacttctg gcgcgcagcg
      541 cttcggacat gcgtgtcgcc gcacggatac tgtatgagcg gagcgacggc agcgaaccga
      601 ttggcaaggt ggccgtcgtt accgatgcgc tggcgcttgc cgatggtccg atcgctgctg
      661 catgccgcaa tgctatagag gcgatcgccg gctgcggggt cgaaatcggc cagcgggacg
      721 cgctggcagc cattgaatcg ctagaccccc atgcaggcgg aggcagcacg agcacaccgg
      781 gcgctgatga cacctggcgc gctggatccg gttctcgcaa agcgactggc caagggggtc
      841 acaatcgacg acgcaactct aaaggccagc gtgtcggcac gcccgcagct ggtgctggat
      901 tttgacgcca acgtctttca gaatgatgga gcgcttgccc tgcccgttct tgcaatccgc
      961 acccccaaga ccaccgagtg cgatccgcgc tcgccgcttt tcaacgccag aacgctgtac
     1021 gagttgagcc atttgacgcg ctttgccaac ctgctcgggc tccctgtggt cgcctttccg
     1081 gcgggcttcg acgaccgggg agtgcccgtc gccttgcaag tcgtcggcag gcctggctcc
     1141 gatcatgcat tgattgcgtt ggctgccgcg gtgcaggatc gaaccgggtg gcactcgcat
     1201 cttccagccg cagtttccga tctggtgacg atctcgaacg atgggtcgcc gttatgagcg
     1261 cttcacgccc ttcggccgca ctggcaaacc tgcgtgtcct cgatcttact cgcgcgcgcg
     1321 ccgggccaac gtgttgccgc atcctgggcg acttcggcgc ggacgtgatc aagatcgagg
     1381 cgcctcccgg cgtcgacccc aacgaaggca tgagcggcgc gcgcgacggt tccgacatgc
     1441 tgaatcttca ccgcaacaag cgttcgctga cgctcaatct gaaggaaaag accggtcacg
     1501 acattttcct gcgattggtc aggcacgcag acgtggtggt tgagaatttt cggccggacg
     1561 tcaaagaccg cctgggaata gcctacgaag cgctcagtgc cgttaatcca cgcgtcatcc
     1621 tcgcctccat ttctggattt gggcagagcg gcccgtatcg cacgcgcgcc ggattcgacc
     1681 agattgccca aggcatgggt ggactcatgt gggtgacggg gatgcccggc gggggaccgg
     1741 tgcgtgccgg gatcgcggtt gccgacatgt ccgcaggggt ctatgccgcg acaggcattc
     1801 tgatcgcact tgccgagcgc gagcgctcag gccgcggcca atgggtgcag acctcattgc
     1861 ttgaggcgca gatcgccctc atggattttc aggcggcgcg gtacctaatc gacggcatcg
     1921 tgccgggaca ggcgggcaac gcgcatcctt actcgacgcc gatgggcgtg tttgaaacct
     1981 ccgacgggtt catcaatatc ggcgtcggcg gcgacggcca gtggcgcgcg ctctgcgtcg
     2041 cactggagcg accggatctc ggaaaggcgc ccgaatatgc gacgcttgat ctgcgctttc
     2101 gcaatcggcc gaagctgacc gcgatcttgt ccgagatctt caagacaaaa agttcgtcat
     2161 actggctcga cgaactcgaa cagcaaggtg ttccggctgg tccgatctac aggctggacg
     2221 aagtttttgc cgatccgcag gtggagcatc tcggcattgc ggcgccgctg catcatccga
     2281 cgcgcggcga catccgcgtt gtcggccagc ccatcggcct gtcccgcacg ccggcaatcg
     2341 tcgaaacgac cttggcgggg ctgggtgcag ataccgatga gatcctgcgc gatgccgggt
     2401 acagcagggc agagatcgcg gatttccatg ccagaaagat tgtttgacag gttcgcatgg
     2461 ccgatgacgt gaccctgata acaggcgcaa gcggctttct tggccatgcg atcattaagc
     2521 tgcttgccca ggacggacgt cgtgcaatcg gattggatcc cgtcccctcg gcgaccgcag
     2581 acatcatcga cgatctctcg gatcgtgcac gccttaaggc gctgctcgcc gacaaaaggg
     2641 tctcgcacat tgttcatgcg ggcggcgtgt ctggcccaat ggtcatgcca gacgatccca
     2701 tcggcgtcat cgcgatcaac gtagccggca gcctcaatct gctgcgcgcg gcaacggaat
     2761 ccggcgtgaa aactttcatc tattgctcgt cggtatcggc gctgggaaat ttctatgaaa
     2821 gcgaaccggt cggcgaggac taccctctgc gccccggctc aacctacggc gcctcaaaag
     2881 ctgcgatgga catggtgctg cgcgggctct ggggcagaat tccgatggat ctatgctcgc
     2941 tgcgcttcac ggcgatctac ggcccgggac ggcagactgt ttttacggtc gagacaatca
     3001 tcaatgccgc actcgccggc aaagttgcgc gcatcgagcc aatgacagat tggccgtaca
     3061 tttatatcga cgatgcggcc caggcggcag tttcagcctg ctttgccaaa ggtcgcagac
     3121 agctcagcta cttcattgcg catccggaaa aagtgacgcc tgacgacatc gcggccgccg
     3181 cggctgcggc cggaaagcca gtgcggctcg agattgatgg tagcaagcca gttggatcgc
     3241 gaggtccggt ggatacgcat gcggcggaac gcgatttcgg ctttcgcgcc agggtaggtc
     3301 accgcgaagg cattcgccga atgatcgaag cggcgcgtta acggagctgg ttgccgcgtg
     3361 atgaaggggc attcatagtt gcagcgtatt tctgaatgag gactgcatgg cacatttaac
     3421 gaccgatgac gggatcaagc tctactatga agaaaccggc aaaggcatcc cggttgtttt
     3481 catccatgaa tttgccggcg actgccgctc ctacgagcag caggttcgcc atttctcgaa
     3541 atattatcgc tgcgtgacgt tcaacgcccg cggatacccc ccatcggatg ttccgaagga
     3601 cggcgagcgc tattcgcagg agcgcgcacg agacgacatc cgttccgtgc tcgatgctct
     3661 caggatcgac aaagcgcaca ttgtcggact ctcaatgggc ggatttgccg cgcttcattt
     3721 cggatttacc tatccagacc gttgccgctc gattgtggtt gcaggttgcg gctatggcgc
     3781 ggcgccaggc gagcgggcca agtttgccga ggaggctgag gcatcggcca agcggtttga
     3841 agaactgacg atgaaaaagg cggccgaagc ctacgcgctg ggtccgacgc gcgtgcagca
     3901 ccagaacaag gatccgcgcg gctggcggga attcgccgac cagcttgccg agcattcgac
     3961 ggaaggctcc gccctcacca tgcgcggcgt ccagaagcgc cggccatcgc tgttcgatct
     4021 ggtcgacaag atgaagaccc tgacggtgcc aactctgatc atgaccggcg atgaggactg
     4081 gccgtgtctc gagccgggca ttttgatgaa gaaaaacatc ccgaccgccg ggctcgtcgt
     4141 gatggcaaat tgcggtcaca acataaacct ggaagagccg gcgctgttca atgcgcacct
     4201 gtccgacctc ttccaggcgg cggacgccgg tgcgtggccc aagcgcgacc cgcgtgcaat
     4261 ggccggcaca attctcggcc gttgaatggg tcaggtcgcg ttatatccgc cgtcgaccag
     4321 caagtccgcc ccggtcatga agctcgaagc atcgctcgca agaaacacgg cggcacgcgc
     4381 gatctcctcc ggctgaccca gcctttgcag caagtgcttc gggccggccg tgcgccgcgc
     4441 cgtttccatg tcgccgaagc gcttgaccag ccgctcggtc tcgacagcgc ctggcgacag
     4501 ggtattgacc cgaacttttt gtgcggcgtg atcggtcgcc atggccttgg ccagctggat
     4561 gagcgctccc ttggtcgcgc agtacgcggc acggcgcggg gccgcgacac taccgagttg
     4621 ggacgcgata tggatgatgc tgcccccacc ggccgcaatc atcgccggca agatggcgcg
     4681 gctcatcaga aacgcgccgc cgacgtttac ggcaaatacg cggttccagt ccgacacggt
     4741 gagatcaagc accgtgccgt tcggatcgta gccggccgca ccattgacca gaatatgaat
     4801 ggcgggaaat ttctgcagga tggccttcgc cgcggcctcg acgtcggctt caccggccac
     4861 gtcgcaacgg acagccagcg ccttgacgcc tttatttgcg gtcgccgcag cggtggcctc
     4921 ggcagctttg gcatcaatgt cgatgcaggc gacattggct ttggcctgcg cgaaggcaag
     4981 cgcgatggcc cgaccgatac cgtttccggc accggtgacc actgcagatt ttcccgccag
     5041 tgaatagtcg ccggatgtca ttaattgttc ctaggacaag gcaggcgcaa tgcggccaag
     5101 ataagcctcc tgaacgcgcg gattttgttt gaggtcgacg caggtcccgc ttgcgatcac
     5161 cgaaccggtt tgcagaacgt agcctcggct tgccgtctcc agcgcataac gggcattttg
     5221 ctcgaccagg agcacgctgg ttccggctgc gttgatcgcc cggatggtgc ggaaaatgtc
     5281 ctgcacgacg attggcgcga gaccaagcga tggctcgtcg aggcagagca actgcggttc
     5341 tgacatcatc gcccgcccaa gcgcgagcat ttgctgttcg ccgccgctta atgttccggc
     5401 gttctgcccg cttcgctccg atagccgggg aaacatgtcg aatacatcgc cgatcattct
     5461 gcggattttt gcgttgtcct tgcggttctt gaatgcgccg agctcgagat tttcgcgcac
     5521 cgtaaggaat ggaaagacgc gccgtccttc cgggactagc gcaatgccaa ggttcgtgcg
     5581 ctcatgcgag gccatcgacg tgatatcgcg cccgcaaaag acgatcgatc cgcgacgggg
     5641 cgcaagcaca cccgctaccg cccgtaatgt ggtggacttt cccgcaccat tcgctccgat
     5701 cagggcgaca atttcaccgg cctcgatgct tagcgaaatg tcgcggcaga ccgatacctg
     5761 cccgtaggcc agttcaagct tctcggtgga gagaagaacg ctcacgacag ctccccgcca
     5821 agataggctg cgatgaccgc aggatttttc tgcacttcgg acggcgtgcc ctgaaacagg
     5881 tgacgcccgt aatccatgac catgatgcgg tcagcgacgt tcatcaccag atccatgttg
     5941 tgctcgacaa caacgaccgt gatgccgcgg ctccttaagg tccggattcg atcaagcagg
     6001 acatccactt
//
LOCUS       DATDHO010000232         5250 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_258470, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000232 DATDHO010000000
VERSION     DATDHO010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5250)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5250)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5250
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258470"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            246..1226
                     /locus_tag="VIY07_04640"
     CDS             246..1226
                     /locus_tag="VIY07_04640"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381075.1"
                     /translation="MQRREFITLLGGLAAASPFVARAQPRGKIYRIGFLGVTSRAEYG
                     RHVDALRKGLRQLGYEEGNNIVFEYRWAEGRYDRLPELVAELVNLNVDVLVAHSTPGA
                     RAAKQATSTIPIVVSAVADPVDVGLVASLARPGGNLTGLTFFLAEICAKRVELIREAI
                     PTLTRVAVIVNPANPSHPIVLEVMQRTAGALGVELVPVEVRARDDIAAAIAGVAARPA
                     SALVPIEDPLLISNAGPIARFALQNRLPLIGFKPQAVASALMEYGPDVLDLFYRSATL
                     VDKVLKGTPPTNLPIERAVKFELIVNLKTAKTLGVTVPLTLIASADEVIE"
     gene            complement(1347..2573)
                     /locus_tag="VIY07_04645"
     CDS             complement(1347..2573)
                     /locus_tag="VIY07_04645"
                     /inference="COORDINATES: protein motif:HMM:NF024760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family intramembrane metalloprotease"
                     /protein_id="HEY6381076.1"
                     /translation="MASYAQSDRLLMGSPLRRRGVCLATGAAAIVVLAFATIVHLGLI
                     GGMRADVMAVYLQALVLSSLLSAVPLAVLWYLDRRERETPWLFAAAFLWGGCIATTLA
                     LPVNTAFFLFVDTIVAQEPAIREILGPDAAMLLAAPISAPIAEEIAKALGVLVLFSFL
                     RAEFDNMRDGIVYGALVGAGFNWFEAALYVAQNYAEHGVATYGLQLGARYALFGLGGH
                     AMFTAIFGAFLGFAIQTQYRWLRVLAPLAGLTLAIAAHMLYNILPLVAALESVAAGEP
                     PARGEPFPDMGFVETFVSTSLLQLVIFLPFLLILAIALWRSGVWERRVIRDELADEVG
                     RTVSADEYRDIVGDRMFRTRRIDRLRPHVSAALVNAQHELAFRKRRVRDAGENPEHDP
                     LIAGWREEIGRLREMV"
     gene            3297..4142
                     /locus_tag="VIY07_04650"
                     /pseudo
     CDS             3297..4142
                     /locus_tag="VIY07_04650"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            complement(4159..4386)
                     /locus_tag="VIY07_04655"
     CDS             complement(4159..4386)
                     /locus_tag="VIY07_04655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381077.1"
                     /translation="MEKLIDIFCHAIRITDPLSIKIAVGIVGGGLPLIFLAAVFMMLS
                     ELVARQRESSMPSSDRPGGSKKGTGRRSVQK"
     gene            4728..>5250
                     /locus_tag="VIY07_04660"
     CDS             4728..>5250
                     /locus_tag="VIY07_04660"
                     /inference="COORDINATES: protein motif:HMM:NF017853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF937 domain-containing protein"
                     /protein_id="HEY6381078.1"
                     /translation="MNLVSLIMKFLTPDMIGRIASALGLNQTDTSSAIGTAVPALLAA
                     LTGVATQPDGPQKLADAAKQEVGTLDQFASMIGASGETSVVARGSQMLASLLGDRDKT
                     ALANAVGKYVGLGSAPSGSLLAALAPVVMGTIAQQQGPRGPSAGTIASLLTSQKDNIA
                     AALPSGFVGSLGDT"
BASE COUNT         1106 a         1589 c         1569 g          986 t
ORIGIN      
        1 gacggatcac gcgatggggg tacgcgcacg ttctcgaagc cgttgaacag cggctcgatg
       61 agcatccgga tcagggtctg tacccacaat caagtcgcgg tcggacgtgg cggatgcact
      121 gcgaaatgtc cgcgaatgac attgggccca atcagcgtct ggcccaaata tgcgccgttt
      181 cttctgcgcc tcccggttgc aaagtgctag actataggca acgcgtggtc cctcgcggag
      241 ggcacatgca gcgacgcgag ttcatcacac ttctcggggg cctggcggca gcatcgccat
      301 tcgtggcgcg tgcgcagcca cgggggaaga tctaccggat cggctttctg ggcgtaacgt
      361 cgcgcgcgga atacggacgc cacgtcgacg ccctgcgaaa gggtcttcgc cagctcggat
      421 acgaggaggg caacaacatt gttttcgagt atcggtgggc cgagggcaga tacgaccgtc
      481 tccctgaact cgtagccgaa ctggtaaatc tcaatgtcga tgtgctcgta gcccatagca
      541 cgcccggcgc acgagcagcc aagcaagcca cctcgaccat tccaattgtg gtgtctgctg
      601 tggccgatcc cgtcgacgtc gggctcgtgg ccagtctcgc ccgtcccggc ggaaatttga
      661 ccgggttgac ctttttcttg gccgagatct gcgccaagcg ggtcgagtta attagggaag
      721 caattccgac gctgacccgg gtggccgtta tagtcaatcc tgccaatccc tcccacccca
      781 tagttcttga ggtcatgcag cgaactgccg gtgcgttggg ggtggaactt gtgcccgtag
      841 aagtaagagc gcgcgacgat atcgctgctg cgattgccgg ggtggcggcg cggccagctt
      901 cggcgctcgt acctatcgaa gacccactgc ttatttccaa tgccggacca atcgcgcgct
      961 tcgcgttgca aaacagatta ccgttgattg ggttcaagcc tcaggcggta gcgagcgcac
     1021 tgatggaata tggaccggat gttctggacc tattttatcg ctcggcgact ttagtggaca
     1081 aggttttgaa gggcactccg ccgacgaatt tgcccatcga gcgcgccgtg aaattcgagc
     1141 tcatagtgaa cctgaagacc gccaagacac tcggcgtcac cgttccgttg accctaattg
     1201 ccagcgcgga cgaagtgatc gagtaattat ctgtcgatgt ccgcttttgg cccttagctg
     1261 actcgcggca caaaaaatat ccgcttcgag cagtcctgct ggctgatctg gtccgccgat
     1321 tggtggcagg cagcgacgct gcaagactaa accatctccc ggaggcgccc gatttcctcg
     1381 cgccagcctg cgatgagcgg atcgtgctcc ggattttcac ccgcgtcgcg gacgcggcgc
     1441 ttgcgaaacg cgagctcgtg ctgcgcattc accagcgcag ccgacacgtg gggccgcagc
     1501 cggtcgatgc gtcgggtgcg gaacatgcga tcgccgacaa tgtcacggta ctcgtccgcg
     1561 ctcaccgtgc ggccaacttc atcggccaac tcatctcgga tcacgcggcg ttcccacacc
     1621 ccgctgcgcc acagcgcaat cgccagtatc aaaaggaacg gcaggaagat cacgagctga
     1681 agcaaactgg tgctgacgaa tgtttcgaca aagcccatgt cgggaaacgg ttcaccccgt
     1741 gccggcggct cgccggcggc gacgctctcc aacgctgcga cgagcggcag aatgttgtag
     1801 agcatgtgcg ccgcgatcgc gagcgtcaat ccggcaagcg gcgcgagcac gcgcaaccac
     1861 ctgtattgag tctgaatcgc gaagccaagg aacgcaccaa agatggcggt gaacatcgcg
     1921 tgcccgccaa gtccgaacag cgcgtaacgg gcgccgagct gcaggccata agtcgccacg
     1981 ccgtgctcgg catagttctg cgccacatag agcgccgcct cgaaccagtt gaagccggcc
     2041 ccgaccagcg cgccgtagac gatgccgtca cgcatattgt cgaactcggc gcgcaggaaa
     2101 gagaacagca ccagcacgcc cagcgccttg gcgatctcct cagcgattgg cgcggaaatc
     2161 ggcgcggcta acaacatcgc cgcatcgggc cccaggatct ccctgatggc cggctcctgc
     2221 gcgacgatgg tgtcgacgaa caggaagaag gcagtattga ccggcaaagc gagcgtggtc
     2281 gcaatgcacc cgccccacag aaaggcggcg gcgaagagcc atggcgtctc gcgctcgcgc
     2341 cggtcgagat accacagcac agcgagcggc accgccgaca gcaagctcga tagcacaagt
     2401 gcttgcaggt acacggccat gacgtcggcg cgcatgcccc cgatcaggcc gaggtggacg
     2461 atcgtcgcga acgccagcac gacgatcgcc gctgcgccgg ttgcgaggca caccccgcgg
     2521 cggcgcagcg gcgagcccat caacaagcgg tcgctctgtg catacgaggc caaggccgca
     2581 ttcctccgcg gaaatcagta tccgctgccg attccagtgg gaccacccga cgatacacgc
     2641 atcatcgagg gcggaggaag gcggcgctca atgtccgctt taccccccag agcaggtatt
     2701 ggaactcggt gcccaggcgc aagttttcct gtctgctttg actcgaagcg gacataacag
     2761 ctcgacattg gacctccgtc caactcgact tcgtggctcg gctatcaaat aattttctgt
     2821 cgcggaggcc aaaatggctg gtcccggaga aatcgacatc aggagcaccg atgaagacgg
     2881 ccacgaaatt tgcggcagct accgagttgc cgccggggtc attcacgtta ctcttcctga
     2941 tggcaccagt actgaaactc agctgggccc caatgacctc gctccgcagt tcgctaagac
     3001 acttctgcag gaactctacc gcagaaaacg tggcgtgagt taaggcccaa ggaagtacaa
     3061 cccttcgata cgctccaacg aagcggcgac aattcatcac gctcatcggc tgcgcggcag
     3121 tcgggtggcc gcttgcggta cgcgcacagc agccgaaagt gccaaccatc ggtgttctgg
     3181 tagttagggc tccgggttct gaacaattct ggcggctgtt ccgagagggg atgcgtgagt
     3241 tgggttacgt cgaggggcaa aacattcgat tttagtttcg atcggacgaa ggcaaggcaa
     3301 gtcgccttcc cgaattggcg gcagagttgg tgcggcttaa ggtcgatatc atcgtggcct
     3361 ggttcacgcc cgctgcccgt gccgcgaagc aggcgacgcg agacattcca gtcgtcatag
     3421 cgctcgcggg aaatccagtt gaaagcggac ttgtcgagag cctcgcccgg ccaggcggaa
     3481 atgtcactgg tatgtcgagt gtcggcgcgg agttggcggg caaaagcgta gaactgatcc
     3541 aagagttgtt accgtcggct cgacgcgtgg cggcgttggc caacgcccct gatccgttct
     3601 cgcgactttt tctcgagcaa atccgacttc gtggccaagc aacggggacc gcgatcgatg
     3661 cagtaatgat tagtggcgcc gaggagcttg agactgcttt tccggcaatg gagcaaaagc
     3721 ggcccgatgc tatcatcgtt caagcgagtc tgccgggcaa acgcgtagct atgaggcacc
     3781 gaataccgag cgttgggaac attcgtgagt ttgccgagga tggcgggcta atgacttatt
     3841 cggccgcgca agccgttatg taccgccacg ctgctatcta tgtggacaag atcttgaaag
     3901 gtgcgaaccc cgccgacctg cccgtaacgc aaccgacaaa attcgagctg gtcatcaatc
     3961 cgccaaagcg ctcggcctca ccgtccgcca tcacttctgg gccgcaccga ccaactgatc
     4021 gaatgacggc gaatgtccac ttttgggccc aaagcggaca ttggtgcttg ctctccacac
     4081 gtctgcttcg gggtaaagcg gacattgcac ggcgcaacac gaaacgtctg ctcataacct
     4141 aaagcgcata tcgtgccact acttctggac ggaacgtcgc ccggtgcctt tcttgctacc
     4201 gcctggcctg tcggacgagg gcatcgagct ttctcgctgc ctggccacga gttcgctgag
     4261 catcatgaaa accgcggcca ggaagatgag cggaaggccg ccgccgacga tcccaacggc
     4321 aatcttgatc gaaagcggat ctgtgatgcg gatggcgtgg caaaaaatat caatcagttt
     4381 ttccatctgt cgttctccgc aaagccggtg ttgacagcat ggcccagctt aagccaatcg
     4441 cgtcgtcagc gcttgaatta ggaaaggccg ggtaacgctc ggcctttcca ttcgcaaacc
     4501 cgaacatcgc ctcgatcggt tcgccgtatc aggatacggg ccagtgataa accgctcaaa
     4561 cggttgagct gagccagcaa gatacgaacg cggaacaatt cccgctcggc ctcgatgccg
     4621 gagattgccc gcgtgcaccc atgccccaag gtccatctcg actctaagtt gatgcctgcc
     4681 gaaaatctca ttccaatcgt tggggcggga gagaaaggca aatggccatg aacctcgtct
     4741 cactcatcat gaagtttctg acacccgaca tgatcggccg gatcgcgagc gcgctcggtc
     4801 ttaaccagac cgatacgtcg tccgccatcg gtacggcggt gcctgcgtta ttggctgcgt
     4861 taacgggcgt tgccacacag cctgacggtc cgcaaaagct tgctgatgcg gcaaagcagg
     4921 aggtggggac gctcgatcaa tttgcgagca tgattggtgc ttcgggtgaa acgtcggtcg
     4981 tcgcgcgcgg atcacagatg ctcgcatcgc tccttggcga tcgggacaag acggcactcg
     5041 ccaatgcagt tggcaaatat gtcggattgg gatcggcccc aagcggctcc ctgctcgctg
     5101 ccttggcccc cgttgtcatg ggcacgattg cccaacagca aggcccgcgc ggtccgagcg
     5161 caggaactat cgccagtctg ctcacgagcc aaaaggacaa catcgctgcc gcgcttccct
     5221 cggggtttgt cggatcgctc ggcgacacgg
//
LOCUS       DATDHO010000233         3886 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_307719, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000233 DATDHO010000000
VERSION     DATDHO010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3886)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3886)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3886
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_307719"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="VIY07_04665"
     CDS             complement(<1..182)
                     /locus_tag="VIY07_04665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEY6381079.1"
                     /translation="MDAPSKEFALAGSLEDLKAKGRLVVRGGHRPILVIYDRGRVFAL
                     DNRCPHMGFPLERGSV"
     gene            complement(326..760)
                     /locus_tag="VIY07_04670"
     CDS             complement(326..760)
                     /locus_tag="VIY07_04670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010911116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381080.1"
                     /translation="MDTNDHDAIKAIIDRQFGSLNWDPTTPADWSGFVGDFLPGASLY
                     PAARPASPQKPEDFVERMKGLATNKLRSFKEAALGHEIRVFGNIAVAVAVCQITENET
                     QVTRGVEMMLLVKTEGRWRIISQAWDNEAEARPIPADLLYSD"
     gene            complement(898..1236)
                     /locus_tag="VIY07_04675"
     CDS             complement(898..1236)
                     /locus_tag="VIY07_04675"
                     /inference="COORDINATES: protein motif:HMM:NF024485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY6381081.1"
                     /translation="MSETAMLKIWRGLDANAGRWETHEVPFEAGQSVLDGLRWIRANR
                     DPTLAIRFSCINANACKECMVELDGKTVYACTARLQPREMTLAPLSNKKLLRDLVTEI
                     APPTERFTVS"
     gene            complement(1233..2930)
                     /locus_tag="VIY07_04680"
     CDS             complement(1233..2930)
                     /locus_tag="VIY07_04680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY6381082.1"
                     /translation="MNQEPMRAETDVLVIGSGAAGMYAAIEAARSGCQVLLADRSLIG
                     RGGATVMAQMTVAVALGSETVDHWSYHYSDTLAAGRGLCNEPLAQLLCEEGPECIRVM
                     DDWGVGWARKDGRIAQVVAPGHDRPRCVYVDFLNTGPAVSKTLRTAVNKIGGIRKAGD
                     LCVVDLLRRNGDVVGAAALHLGSGAPVILSAKATILATGGLTRLYRRNSASANMGGDG
                     YALALRAGASLVDMEFVQFFPIGHLAPRLVGMDPIMWDPFRYKLGGRLLNNRMEEFTQ
                     RYGVVEDGKYVISRDLGSYAILKEVEAGRGSPHGGVYLSFQHCPENALRESFGPVIDR
                     LAANGIDLTKMPIEVAPIAHYHMGGIVADARMQTGLPGLFAAGEAVGGANGANRLSGN
                     AITEALVFGRRAGRSAADYVKRLRAPPDHADNAHSAIALIAADAPTRNFNTAEMLQTL
                     QKLMQDNVGALRSETKIIAALDGIRRLTDQLGDTPPGDGNRFDMRRIDWFDLRNMLLV
                     ARLVAEAALARTETRGAQQREDYPRLSPDWACNQTVRLKDACIELSGGPRALTETTS"
     gene            3391..3516
                     /locus_tag="VIY07_04685"
     CDS             3391..3516
                     /locus_tag="VIY07_04685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381083.1"
                     /translation="MGTSLGDKIVIVIALLLLAVVVVASVEFPGIIRAARLVAAL"
BASE COUNT          812 a         1164 c         1096 g          814 t
ORIGIN      
        1 tcgacgctgc cgcgctcaag ggggaagccc atatgcgggc aacggttgtc gagtgcgaag
       61 acgcgtcccc ggtcgtagat gaccaggatc ggacgatggc caccgcgcac aacgagccgc
      121 ccctttgcct tcaggtcctc aaggcttccc gcgagcgcga attccttgct cggcgcgtcc
      181 atgagcatac ctcccgcagt cttttcattt ggggcgctgt agctcccccg tcaacatggg
      241 tgctcaatgt ccgcttttgg gagtaagcgg acgtcgcgca gacctgcgac cgacggcgcg
      301 ctgaagacca ttcttctcgc tttggtcaat ctgaataaag aaggtccgct ggtatgggcc
      361 tcgcctcggc ctcattgtcc caagcttgag aaatgatccg ccatcggcct tcggtcttaa
      421 cgaggagcat catttcaacg cctcgagtaa cttgcgtctc attctccgta atctggcata
      481 cagcaacggc aacggcgata tttccgaaga cccgaatctc atgccccaac gcagcttcct
      541 tgaatgagcg cagcttattc gtcgctagtc ctttcatgcg ctcaacgaag tcttcaggct
      601 tctgggggct cgcggggcgg gcagcaggat agagagaagc tcctggcaaa aaatctccaa
      661 caaatccgct ccaatccgca ggtgtagtgg gatcccaatt caggctcccg aattgccgat
      721 cgataattgc cttaatggca tcgtggtcat tagtgtccat gatgcatgtc acctctggtt
      781 caaaaaagct ccgcgcgata ccgctttacc cccgaaagtg ggcattgaac gacaattttg
      841 gatgtcgcct aagggccaaa agcagacatg ccatgacgcc gatcaatgtg gtgacagcta
      901 tgagaccgtg aaacgctctg tcggcggcgc tatttcagtg accagatcgc gcagtagttt
      961 cttattggag agtggcgcca gcgtcatctc gcgtggctgc aggcgggcgg tgcaagcgta
     1021 gaccgttttg ccgtcaagtt cgaccataca ctccttgcag gcattggcat ttatgcagga
     1081 gaagcggatc gccagagtcg gatcgcgatt ggcacggatc caacgtaggc cgtcgagtac
     1141 cgattgcccc gcctcaaacg gcacctcatg ggtttcccac cgacccgcat tcgcgtcgag
     1201 gccgcgccaa attttgagca tagcggtttc gctcacgagg ttgtctccgt aagggcgcgt
     1261 ggaccgcccg acaattcgat gcaggcgtcc ttcagcctca cagtctgatt gcacgcccag
     1321 tccggcgaca atcgcgggta gtcctcgcgc tgctgcgccc cgcgagtttc ggtgcgcgca
     1381 agcgccgcct ccgcgaccag gcgggctaca agcaacatgt tgcgcagatc gaaccagtcg
     1441 atccgccgca tatcgaagcg attgccgtcg ccgggcgggg tgtcgccgag ctgatcggtc
     1501 aaacgacgaa tgccatcgag ggctgcaata atctttgtct cacttcgcaa ggcgccgaca
     1561 ttatcttgca tcaatttctg aagagtctgc agcatctcag cagtattgaa gttgcgggtc
     1621 ggcgcatcgg cggcgatcaa tgcaatcgcc gagtgcgcgt tgtcggcatg atccggaggt
     1681 gccctcaagc gcttgacata gtcggcggcg ctgcggccag cacggcggcc aaacacgagt
     1741 gcttcagtaa tagcgttacc ggaaagccgg ttagcgccat tggcgccacc gaccgcttcc
     1801 cccgccgcga acaagccagg caaaccagtt tgcatccgcg cgtcggctac gatgccaccc
     1861 atgtgatagt gcgcgatagg tgcgacctcg atcggcattt tggtcagatc gatgccattg
     1921 gcggcgagac gatcgatcac cggcccaaag gattcgcgca aagcgttttc cggacagtgt
     1981 tgaaaactga gatacacccc gccgtgcggc gagccgcggc cggcttcgac ctccttgagg
     2041 atcgcgtaac tgccgaggtc tcgcgaaatg acatatttgc cgtcttcgac cacgccgtag
     2101 cgttgcgtga attcctccat gcggttgttc agcagtcgcc caccaagctt atagcggaaa
     2161 gggtcccaca taattgggtc catcccgact agccgcggcg cgagatggcc gattggaaaa
     2221 aactgcacga attccatgtc gacgagcgaa gcgccggcac gcaaagccaa ggcatagccg
     2281 tcgccgccca tgtttgctga cgcgctgttg cgtcgataaa gccgtgtaag accaccagta
     2341 gccaggatgg tcgcctttgc tgacaaaatc acgggcgcgc ccgatccgag atgaagcgcc
     2401 gcggcgccca cgacatcacc attgcggcgc agaagatcga cgacgcagag atcacccgcc
     2461 ttgcgaattc cgccgatttt attcactgcg gtacgcagcg ttttcgatac agcaggcccg
     2521 gtgttgagaa agtccacata gacgcagcgc ggacgatcat ggccgggagc cacgacttgt
     2581 gcgatgcgac catctttccg cgcccagccg acgccccaat cgtccataac gcggatgcac
     2641 tcgggccctt cctcacacaa caactgtgca aggggctcgt tgcataatcc gcgcccggcg
     2701 gcgagtgtat ccgagtaatg atagctccaa tggtcgacgg tttcggagcc gagcgcgaca
     2761 gcaacggtca tctgcgccat caccgtggcg cccccgcgac cgatcaggct acggtcggcc
     2821 agaagcactt gacagccgct gcgcgccgcc tcaatcgccg catacatgcc tgcggcgccc
     2881 gatccaatca ccaaaacatc ggtttcggca cgcatcggtt cttggttcat gaacatctcg
     2941 ccacggacca cggtaggtgc gcatcaagca tcatccatgt tgttttcgcc gaaggccacc
     3001 gttcatgcgt cacatttcgg ggtcatcagg ggagaccccg aaagcggacg ttcatcagcg
     3061 cgcatgccgg gtccaataaa ggacactacg gcatattgaa cggatatccg ctttacttgc
     3121 aaaatcgtgg cttcgggtca ccagagaggt gcaaatggtg gcgccgttat agctaattgg
     3181 cgcaaccagt tcatttcatg cgcgccctca cccgcgtcat ttgaatgtcc gtcttcgatc
     3241 actgggtgcg cacattgaag atcaacgccg tgctggtcga aagcccgtta acgttaacca
     3301 tgtattaatt ctttccaagc ttctacccgg ttaccatggg gtgcgcctta cggcggctaa
     3361 gctgtctaat ctgcgaatgg gaggctcgtc atgggtacga gtctgggcga taaaatagtg
     3421 atcgtcattg cactgctgct cttagctgtc gttgtggtcg cgagcgtcga gtttcccggg
     3481 atcatccggg ctgcgcgact cgtcgcggct ctgtagggtt tgcagtcatc atcgactgaa
     3541 ctttgaaaag ggccggagct ctgcccaagt cgtccgctta tgggccaaca gcggacacgt
     3601 tggcgcttta gctctgcagc ggttcaatcc acatgtaatg cgatcctcaa gctgaagcga
     3661 gcgcacaccg cgctcccgcg cagggtagtc gcgtcgaagc acccggcaat atgccgaagg
     3721 ctcgctcgcc aaattttgcg attatgatgc gacgtttttg gtgtgcctga ccggagcgcg
     3781 ctcgatcact tcagcggctt agcacattgc ccaaggtttt gtttaaatca gaaatctgta
     3841 ttggaccctg gcacgcgttc gactgagcaa tgccgagcct ggtcaa
//
LOCUS       DATDHO010000234         2426 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_109844, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000234 DATDHO010000000
VERSION     DATDHO010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2426
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_109844"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VIY07_04690"
     CDS             <1..315
                     /locus_tag="VIY07_04690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381084.1"
                     /translation="RMIAVLRTMCILVCTAALPDHYPTMRSLALQQKRKMTGGARVAV
                     RSKFLTIVLVLFAVASLHPAAAQVVIPHGDFDSDFEKYLVATISFVLLCLAAWQFYRN
                     RQ"
     gene            complement(711..1442)
                     /locus_tag="VIY07_04695"
     CDS             complement(711..1442)
                     /locus_tag="VIY07_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6381085.1"
                     /translation="MRLQFIGCGDAFGSGGRFNTCFHVHDAAGNFLIDCGASSLVAMK
                     RLGIDRNAIDLILLTHFHLDHFGGVPFFVLDAQLVAKRTRPLTIAGPPGLPGWYDRLF
                     AATFPGERKLPFELNLRELTVGAQNRIGGLAITPFHVRHDDKAGPCLAHRIELEGKVL
                     CYSGDTEWADSLLEAASGADLFICECYMFDKVVRAHLSLSTLREKLPAIGAKRVILTH
                     MSEDMLSRLPKIEFETADDGKVISL"
     gene            1537..1707
                     /locus_tag="VIY07_04700"
     CDS             1537..1707
                     /locus_tag="VIY07_04700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381086.1"
                     /translation="MGQLLITLIVPPMVGLITYIVLRRLWEREEETPSPSEAASRQEP
                     SLVDKHEEMPAH"
     gene            1882..>2426
                     /locus_tag="VIY07_04705"
     CDS             1882..>2426
                     /locus_tag="VIY07_04705"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY6381087.1"
                     /translation="MSYFRTAILLAGLTALFMGIGYLIGGANGALIAFFVAAAMNFVT
                     YWNADKLVLSTQGAQEVDEHAAPELVHLVAELAGRAGLPMPRVYIMHNPQPNAFATGR
                     NPQNAAVAVTTGLLEMLSRDELGGVIAHELAHIKNHDTLLMTITATIAGAISMLAQFG
                     MFFGGGHRDSSGHGGMGMIGTL"
BASE COUNT          521 a          719 c          686 g          500 t
ORIGIN      
        1 cgcatgatcg ctgtactgcg aacgatgtgc attctcgttt gcaccgctgc cttaccggat
       61 cattatccga caatgcgatc cctcgctctc caacagaagc ggaaaatgac tggcggcgct
      121 cgggtggcag tacgatccaa attccttacg attgttctgg tgcttttcgc tgtagcttcc
      181 ttgcacccgg cagctgcaca agttgttatc ccacacggcg atttcgacag cgattttgaa
      241 aaatatctgg tagcgacaat ttccttcgtg cttctctgtc ttgcagcctg gcagttctac
      301 agaaatcgtc agtgacgcac cgtgcgagcg agcattcgac caaaaaaatc gggccccgat
      361 tttctcgggg cccgcagatc gggtgttttg ctcttaatag caaactcgct tgcgcacagt
      421 cacgcgatcg ccaaaccggt tgatccgctt tgtgaccacc actcggcacc cgcggtcgaa
      481 ggcgtaagcg cctcgcccat gatgacgatg acgccaccca ccatgatcgc ggtcgccgac
      541 cgaaatgcga acgtcttgag cgtttgcgac gccgattccg ctggttaacg gcagagctaa
      601 ggccaaggct gctcccagaa cgagatattt catgcgcgtt cctcctcctc tactgattgc
      661 atcaacgggg aacccgacga tcagttccag aaagtgcgca tggaactcaa ctataaagag
      721 atcacttttc catcgtctgc cgtttcgaac tcgatcttgg gcagcctcga caacatatcc
      781 tcgctcatgt gagtcaaaat cacgcgcttg gcgccaatcg cgggcagctt ctcgcgcaat
      841 gttgaaagcg agagatgcgc gcgaacgact ttatcgaaca tgtaacactc gcagatgaag
      901 agatcggcgc cgcttgcggc ctcgagcaac gagtcggccc attcggtgtc gcccgaatag
      961 caaaggacct ttccttcgag ctcgatgcga tgcgcgaggc atggacccgc cttgtcatcg
     1021 tgacggacgt ggaacggcgt aatcgccagc ccgccgatcc ggttctgggc gccgaccgtg
     1081 agctcgcgca ggttcaattc gaacggcagc ttgcgttcgc ctggaaatgt cgcggcgaac
     1141 aaccggtcat accaaccggg caggccgggc gggccggcga tcgtcaacgg cctggttcgc
     1201 ttggcgacaa gctgcgcatc gagaacgaaa aatggcacgc caccgaaatg atcaagatga
     1261 aaatgcgtca gcaggatgag atcgattgcg ttgcgatcga tccccagtct tttcattgcg
     1321 acgagcgaag aagcgccgca gtcgatcaga aaatttcctg cggcgtcgtg aacatgaaaa
     1381 cacgtgttga accgaccgcc tgacccgaaa gcgtcgccgc aaccgatgaa ctgcaggcgc
     1441 attacaccct ccgtacccgt ggaaaacctg atgcttcccg acacgtagcg cgggcgtcaa
     1501 aacaggtcta tgctgtgcac cgggagcatg ggtgttatgg gtcagctcct gatcacgctg
     1561 atcgttcctc cgatggtggg tctgatcacc tacatcgttc ttcgccgcct ttgggaaagg
     1621 gaggaggaaa ctcccagccc cagcgaagca gcaagccggc aagaaccctc cctggtcgac
     1681 aagcacgaag agatgccggc gcattagccg cgcacgttgt ttgagcggac cgatcgagac
     1741 gggcccgacc ggaaagaatg ttcgcggcgg atacaatgcg cgaatccgcc gcagcgatct
     1801 ggcaggttgg ttccttgaat tccttgaggg acttcccaaa tagcgctgcc gtcggagttt
     1861 gaatccattt taggatgcgc catgagctac ttccggacgg caattctgct cgctggcctg
     1921 acggccctgt tcatggggat cggctatctg atcggcggag ccaatggcgc gctgatcgcg
     1981 tttttcgtcg ctgccgcgat gaatttcgtg acctactgga atgccgacaa acttgtgctg
     2041 tcgacgcaag gcgcccagga ggtcgacgag catgcggcgc ccgagctcgt tcaccttgtg
     2101 gctgaattgg caggtcgagc cggactgccg atgccgcgtg tctatatcat gcacaatccg
     2161 cagccgaacg ccttcgcgac cggacgcaat ccacagaatg ccgccgttgc cgtgacgacc
     2221 ggcctgctcg aaatgctgtc acgcgacgag ctcggaggcg tcattgccca tgagcttgcc
     2281 cacatcaaga atcacgacac gctgctcatg acgatcaccg cgacgattgc cggggcgatt
     2341 tccatgctgg cccagtttgg aatgtttttc ggcggaggcc atcgcgacag cagcggtcac
     2401 ggcggcatgg gcatgatcgg gaccct
//
LOCUS       DATDHO010000235         3112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_10659, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000235 DATDHO010000000
VERSION     DATDHO010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3112
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_10659"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            43..255
                     /locus_tag="VIY07_04710"
     CDS             43..255
                     /locus_tag="VIY07_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381088.1"
                     /translation="MKVPYFDPVPIEVAFGFRLARGFNLANVFGQTKSKSIGVGTLIV
                     LLPFVPLSNGPKIDYFSHSVVVAPRW"
     gene            complement(759..2171)
                     /gene="fumC"
                     /locus_tag="VIY07_04715"
     CDS             complement(759..2171)
                     /gene="fumC"
                     /locus_tag="VIY07_04715"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEY6381089.1"
                     /translation="MAKARNKSAKIRTESDAFGPLQISADRLWGAQTQRSLHNFRIGS
                     ERMPIEIVRALGVIKRASAEVNRQLGSLDRKRANAIAAVAQDIADGKLDSHFPLLVWQ
                     TGSGTQSNMNVNEVIANAANLTLGGTIGSKSPVHPNDHVNMSQSSNDSIPTAMHISAA
                     VQIERHLKPALARLHKALDRKAREFSKIVKIGRTHLMDATPITLGQEFSGYAAQVQSA
                     LARLTLAQRELYPLAQGGTAVGTGLNSKPQFARAVARRIASLTKLPFTSASNKFEHMA
                     AHDAYVFVHGAINSAATALFKIANDIRLLGSGPRSGLGELILPSNELGSSIMPGKTNP
                     TQSEALTMVCCQVFGNQTTITIAGSQGHFELNVYKPLLAYCMLQSIRLLGDAVNSFTV
                     NSVEGIRANEARIRELMERSLMLVTALAPKIGYDKAAQVAKAAHANGTTLRDEAVRLG
                     FISEADFDRIVRPEKMTRPR"
     gene            complement(2266..2838)
                     /locus_tag="VIY07_04720"
     CDS             complement(2266..2838)
                     /locus_tag="VIY07_04720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /protein_id="HEY6381090.1"
                     /translation="MADQIRYDLLTQHALRGVVRNVLTDTAKKGLPGDHHFYISFDTR
                     AEGVRLSDRLRAQYPDEMTIILQHQFWDLKVNEEGFEVGLSFGGVPERLSVPFDAING
                     FFDPSVQFGLQFEEVIESEERPTPANVQEPPAARTQKKRLPATPAPTATTEPAPAATR
                     SPAPAAKREKPEKPVNGSGEVVRLDRFRKK"
     gene            complement(2948..>3112)
                     /gene="ssrA"
                     /locus_tag="VIY07_04725"
     tmRNA           complement(2948..>3112)
                     /gene="ssrA"
                     /locus_tag="VIY07_04725"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01849"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="alphaproteobacterial-type; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01849"
BASE COUNT          643 a          843 c          904 g          722 t
ORIGIN      
        1 ggcccgcaat tacgattgaa cgtttgacga ccggagattt cattgaaggt cccctatttc
       61 gacccggtgc cgatcgaggt cgcgttcggc tttcgcctgg cgcgcggctt caatcttgcg
      121 aacgtgtttg ggcagaccaa aagcaagtcg attggcgtgg gcacgttgat cgtgctgttg
      181 ccgtttgtcc cgctttcgaa cggtccgaag attgattact tcagccattc agtagtcgtc
      241 gcccctcgat ggtaacgggt tacgtttcag ctcggcgctc acgtgagcgt tcaccatcac
      301 tgtgaaatgc gccgacacgt tggcggaaac atgccattac ggcgaactcc acaaggtggg
      361 tcttgaaaca gtgtggctga ttggtcgtgt agatcaatac acggttggtt gatcacaaaa
      421 gtttagcaag tgatccttgc tcaaaacgag tagaaaactt gaatgtattt tgcgaggtac
      481 cctggaactt gccaatgtat atttaaacat tgaagcgttt atactgttga acacatgaat
      541 cgagccccaa tgaaactcta cggcattgtt ttcttgttgg gatatttgac atgcggcttc
      601 cgtagaatag tagccggata cgtacaaaac tttcgccata atacattcaa gacttggaaa
      661 aaaagcctcc ggaataccgg agtttagtgg ggtcggtcgc gatgatccct tggtaaatcc
      721 ttaccgggat acctttcgcg aatcggcccg gtcacaaatt agcgaggtcg cgtcattttt
      781 tcgggtcgaa ctattcgatc gaaatcggcc tcgctgatga agcccaggcg aacagcctcg
      841 tcacgaagcg tcgtcccgtt tgcgtgcgcc gccttcgcga cctgtgcggc cttgtcgtaa
      901 ccgattttcg gggcgagcgc ggtcaccagc atcagcgaac gttccatgag ttcgcggatg
      961 cgtgcttcgt ttgctcggat accttcgacg ctgttcacgg tgaacgaatt taccgcgtcg
     1021 ccaagcagcc ggatggactg cagcatgcaa tacgcgagca gcggcttgta gacgttcaat
     1081 tcgaaatgac cctggcttcc ggcgatcgta atcgtcgtct gattgccgaa cacctgacag
     1141 cagaccatgg tcaaggcttc gctctgggtc ggattggttt tgccgggcat gatcgaggaa
     1201 ccgagttcgt tgcttggcaa gatcagttca ccgagacctg agcgagggcc agatccgagc
     1261 agacgaatgt cattcgcaat tttaaagagc gcggtcgcag ccgaattgat ggcgccgtgc
     1321 acgaacacat atgcgtcgtg agccgccatg tgttcgaact tgttggacgc gctcgtgaac
     1381 ggcaattttg tcaggcttgc gatccgccga gcgacggccc ttgcaaattg cggcttcgaa
     1441 ttgagtccgg tgccgaccgc tgtgcctccc tgggcgagcg gataaagctc acgttgagcc
     1501 agcgtgagcc gtgcgagcgc tgactgcacc tgtgcggcgt agccggaaaa ttcctgcccc
     1561 aaggtgatcg gagtggcatc catcagatga gtgcgaccga ttttgacgat cttcgaaaac
     1621 tctctcgcct tccggtcgag ggctttgtgc agacgtgcca aggctggctt gagatgccgt
     1681 tcaatctgca ccgccgctga aatgtgcatg gcagtcggaa tggaatcatt cgacgactgg
     1741 ctcatattga cgtgatcgtt cggatgcacc ggcgatttcg agccgatcgt tccgccgagc
     1801 gtgagattgg cggcgttggc gatcacctcg ttgacgttca tgttgctttg ggtgccggac
     1861 ccggtttgcc acacaagcag aggaaaatga ctgtcgagct tgccgtcggc gatatcctgg
     1921 gccacggccg cgatcgcatt ggctcgcttg cgatcgagcg atccaagttg ccgattgacc
     1981 tcggcggagg cgcgcttgat cacgccgagc gcacgcacga tctcaatcgg catccgctcg
     2041 cttccaatgc ggaaattgtg caaagaacgc tgagtttgcg ctccccagag ccgatcggcg
     2101 gaaatctgca atggcccgaa ggcgtcgctc tcagtgcgga tcttggcgga tttgttgcgc
     2161 gctttggcca tgaaattcgt tgaacgccgc caaacccgat gttctcatcc caaggctacg
     2221 ccgatcgaca cgagaaacaa gtgtcgtagc gcgcgtcagc aacggctatt ttttccggaa
     2281 acggtcaagg cggacgactt ctccgcttcc gttcacgggc ttctcaggct tctcgcgttt
     2341 ggcggcagga gcgggcgatc gcgttgcggc cggcgcaggc tcggtcgttg cggtcggtgc
     2401 aggagttgca ggcaagcgtt tcttctgagt ccttgcggca gggggctcct ggacattcgc
     2461 aggagtcggc cgctcttcac tctcgatgac ctcttcgaat tgcaggccga attgcaccga
     2521 gggatcaaaa aaaccgttga ttgcatcaaa cggcaccgag aggcgttccg gaacgccgcc
     2581 gaacgaaagg ccgacctcga acccttcctc gttgaccttc agatcccaga attggtgctg
     2641 caggataatc gtcatttcgt ccggatactg ggcgcgcaag cgatccgaca ggcgaacgcc
     2701 ttcagcacgg gtatcgaatg agatgtaaaa atggtgatcg cccggcagcc cttttttggc
     2761 ggtgtcagtc agcacgttac gaaccacgcc gcgcaaagca tgctgggtca aaaggtcgta
     2821 tcggatctgg tctgccatat gaggtgcggc ctggggtgaa tcacgcaatg ctaccgcgtc
     2881 gcatgcgggt aacgccatcc ccgccaggac gagcgtgccg tcataatttt tgaaccctgg
     2941 atgcgtaagt ggaggcttct gttgccaggt gcctccggac cccgcctgac ggagcttaac
     3001 ccgtcagggc tttagatcgg tctttcaaac cgcttacgcg gcctgtctaa ccggagcata
     3061 gttgttgtcg ttagcaacta tgatttcggc ccgataacgg cggtaccatg cc
//
LOCUS       DATDHO010000236         1808 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_258659, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000236 DATDHO010000000
VERSION     DATDHO010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258659"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1404)
                     /locus_tag="VIY07_04730"
     CDS             complement(<1..1404)
                     /locus_tag="VIY07_04730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381091.1"
                     /translation="MANIPQKSKDATEEALSAIQEALNVRPPETRTETPSAPAPASEP
                     DASPTSRTAELFPHEASQAGWPLGEATPRRAANDDREGIGQILQALRHRPARGPYIAA
                     GVSSFIWIAGWLAIAALYGSEIRFAAPGSGFAATVALAALIAVPVIFFFVLAHMFNRA
                     QDMRVVAESMAEVAMRFAQPESVARESIVTVGQAIRREVAAMGDGVERALARAAELEA
                     LVHNEVSALERAYNDNEVRIRDLLTELGNQRENLVNQAEHVRNAIASVHLDLAHDVTS
                     VGDLVADKVNEVAQRVTRSLTEKGEHITLALGHAGDSMIDALSERGSTLLDRLETTSD
                     KTTTAISSASDRLSDSLNFKTEHVHNEFAELAARLQQMMTARLDQVAQSFAQKSSVTI
                     DSMAARSQQFTEAITETSDRLAASITSRADEVNAALRSTGDSLVLDLSLRGGDVVSKL
                     EQTSSRITETIAERSNSV"
BASE COUNT          339 a          528 c          556 g          385 t
ORIGIN      
        1 gacggagtta cttcgctcgg caattgtttc ggtgatgcgg gagcttgtct gctcaagctt
       61 cgagacgacg tcgccacccc gaagggagag gtcaagaaca agcgagtctc ccgtggaacg
      121 cagggcggcg ttgacctcat cagcgcgtga ggtaattgaa gcggccagcc ggtcgctggt
      181 ctcggtaatt gcctcggtga actgctgcga acgggccgcc attgaatcga tggtgaccga
      241 cgatttctgg gcgaagcttt gcgcgacctg atccagacgc gcagtcatca tctgttgcag
      301 gcgggccgcg agttcggcga actcgttgtg cacgtgctcg gtcttgaaat tgagactgtc
      361 ggaaagccgg tcgcttgctg aggaaatggc cgttgtcgtc ttgtcactag tcgtttcaag
      421 ccgatcgagc agcgttgagc cacgctcgct gagggcgtcg atcatggaat ccccggcgtg
      481 tcccagggcc aaggttatat gttccccttt ttccgtgagc gaccgtgtga ccctttgagc
      541 cacctcgttg accttgtccg caaccaggtc tccaaccgag gtgacatcgt gcgcgagatc
      601 gagatgtacg ctggcaatgg cgtttcgcac gtgttcggcc tggttgacca ggttttcgcg
      661 ttgattgccc aactcggtca gaagatctcg aatccggact tcattgtcat tgtaggcacg
      721 ctcgagcgcg gagacttcgt tgtgcacgag cgcttccagc tccgcggcac gggcgagggc
      781 gcgttccacg ccatctccca tggctgcgac ctcgcggcga atggcctgtc cgaccgtgac
      841 aatcgattct cgcgcgacac tctcgggttg cgcgaagcgc atcgccacct cggccatgga
      901 ttcggcaacg acgcgcatgt cctgcgcgcg gttgaacata tgcgcgagaa cgaagaaaaa
      961 tatcaccggc accgcaatca gggcggcgag cgcaacagtg gcagcaaatc cggaaccggg
     1021 cgcggcgaag cgtatttccg agccgtacag cgccgcaatc gcaagccagc cggcgatcca
     1081 aatgaagctg ctcacacccg cggcaatgta tggaccgcgc gccggacggt gccgcagggc
     1141 ctgcaagatc tgaccgatgc cctcgcgatc atcattggcg gcacggcgtg gtgtggcttc
     1201 gccaagcggc caaccggcct gcgatgcctc atgggggaac agttctgcgg tccgggaggt
     1261 cggtgaagcg tctggctcgc tcgctggggc tggcgcagac ggcgtttcgg ttcgtgtttc
     1321 aggcgggcga acgttgaggg cctcctgaat tgcggagaga gcctcctccg tagcgtcttt
     1381 tgatttctgt ggaatattcg ccatatcggt cgtcgccctg tcatttcgcc ggacttttcg
     1441 ccgcggccca actgtgacga taggcagagt tatgccgtca gcacggcctg ctgcgggccc
     1501 ataagaaccc gcaaatctcc ccgccttatc gccccggagg gcatcctatc gccttgtcat
     1561 tacgaaagaa accacgctgg taaggtcttt ttcatcatcg ttaactgttt gctaaccata
     1621 gcaacgtgcg gacacgcata cctgcggcga gctcatttgg ccgccgaatt gaggccgcga
     1681 tgcggccaaa tgatcgacgc gctcgagtag ctgaatggaa ttacgcggcg ctaaccaccc
     1741 gctctttttg gcatacggag gcggcacttc gcggatctta tttacctgaa tttggtgtga
     1801 ttaggcca
//
LOCUS       DATDHO010000237         1951 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_208864, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000237 DATDHO010000000
VERSION     DATDHO010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1951)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1951)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1951
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208864"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            631..942
                     /locus_tag="VIY07_04735"
     CDS             631..942
                     /locus_tag="VIY07_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEY6381092.1"
                     /translation="MAKVMSKSELIQKIAEMHSNKNMARKDVKAVIESLAEIGYKELN
                     KSGAFLVPGFAKFVVIKKPATKERSGINPFTKEPTIFKAKPARKIVKARPVKAAKDAV
                     L"
     gene            complement(989..1669)
                     /gene="tenA"
                     /locus_tag="VIY07_04740"
     CDS             complement(989..1669)
                     /gene="tenA"
                     /locus_tag="VIY07_04740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050334 - thiaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006772 - thiamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HEY6381093.1"
                     /translation="MRFFERLKAAASAEWRVYTEHLFTNAMADGLLVEAAFRHYLVQD
                     YLFLIEFARAYALAVYKSPKLADMREAAAGLSAILDVEMNLHVKLCAGWGLSPHDLER
                     APPAVEMLAYTRYVLDTGMRGDLLALQVALAPCVIGYAEIAARLSARPEALAETNPYR
                     EWIAEYAGAPYQAVAAKARAHLERLADSYSTPAREAELIAIFKEATRLEIEFWEMAWR
                     AGQRGDRR"
BASE COUNT          448 a          571 c          534 g          398 t
ORIGIN      
        1 acgcacttta aagtgcgctg acccaagcgg gttctcccga tccccggatc gaccgtgtct
       61 gcattacgtc gtcgtgtcct cgccaattcc ttcaaaatct caaacgccgt ctcggtgcct
      121 agcctcacct ccttcaatct cgctcgtttc aacgcaacta ccctatagca cttcgatgcc
      181 gcagtggggg cgccgtccac agcatcaaaa gcggacattt tacggtgcaa tcgccatgtc
      241 cgctttacca ccgaaagcgg acattcggca gcgcaaaaca aacaagagcg gactgatgca
      301 catgaacaaa aacggacggt tgttcaagtg aacgttgggc aaccgaggct gctgagcacg
      361 taaatgaaat ggcaaaggca aaagcaattt tgcccacatt agcttcggga tgtgttgtgg
      421 ccgtcgccgt tctgacttta tttaaggttg agtgcgcgac cgcaactttg ggttcaagag
      481 gtacttggtc ggcaagcgta aggcccaccg gcgacgcatt gccttcaact tttcccctaa
      541 attgtttcgg ggcagcgatc tgccgggttc cttctaccgc aagcttcggg ctaactcagt
      601 tgcgcatgat tcgaaaatat ggaggtgcgc atggccaagg tgatgtcgaa atcggagctc
      661 attcaaaaaa tcgctgagat gcactcaaac aaaaacatgg cgcggaagga cgtcaaagcg
      721 gtcatcgagt cgctcgctga gataggctac aaggaactca acaaatcggg agccttcctt
      781 gtgccgggct ttgccaaatt tgttgtcatc aagaagccag caacaaagga gcgcagcggc
      841 atcaatccgt tcacaaagga accaacaata tttaaggcga agccggctcg gaagatcgtc
      901 aaggctcggc cggtaaaggc tgccaaagac gcagtattgt agcgtcgcca atggcgttcg
      961 gtgctttatt tatacaacct atttttagtc agcgcctatc accacgctga cccgcgcgcc
     1021 aggccatttc ccagaattca atttcgagcc gcgtggcttc cttgaagatc gcaatcagct
     1081 cggcctcgcg ggcgggcgta gaataggaat cggcaaggcg ctccaagtgc gcccgcgctt
     1141 tcgccgcgac cgcctggtag ggcgcaccgg catattcggc gatccactcg cgataggggt
     1201 tcgtttctgc aagcgcttcg ggccgcgcgg aaagccgcgc cgcgatttcc gcgtagccga
     1261 ttacgcaggg ggcaagcgcc acctggagcg ccagtagatc gccgcgcatt cccgtgtcga
     1321 gcacgtagcg cgtataggcc agcatctcga ccgccggagg ggctcgttca agatcgtgcg
     1381 gcgacaggcc ccagccggca cagagcttca cgtgcaggtt catctcgaca tcgaggatgg
     1441 ccgaaaggcc ggcagcggct tcacgcatgt cggcgagttt tggtgacttg tagacggcga
     1501 gtgcgtaggc gcgggcaaac tcgatgagga acaggtagtc ctgaacgagg tagtgacgaa
     1561 atgccgcttc gacaagcaaa ccgtctgcca tcgcgttggt gaagagatgc tcggtataga
     1621 cgcgccactc ggcggacgcc gccgccttca gacgctcgaa gaagcgcatg ggttcctgcc
     1681 cgggttgctc gcccgccaac tcatccaaca tctacattcg aaatgtctgc agccttcaag
     1741 ctcgttgcca tagcacgagg actcctgcct ccagcgccgc gcgctcgaaa tagatcagcg
     1801 atcaagccaa agatcagcct ttctagaatc ccacatccca cacaggatcg tatggtccga
     1861 atctcgtccg gcgcccaccg gattaaattt acgacaggga caggctatga ttttgatgcc
     1921 ttccgccgcc gaatctcgcc tttccgcccc t
//
LOCUS       DATDHO010000238         1774 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_258852, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000238 DATDHO010000000
VERSION     DATDHO010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1774
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258852"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            40..489
                     /locus_tag="VIY07_04745"
     CDS             40..489
                     /locus_tag="VIY07_04745"
                     /inference="COORDINATES: protein motif:HMM:NF012922.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004427 - inorganic diphosphate
                     phosphatase activity [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEY6381094.1"
                     /translation="MQVFIENEAGSRRKNIYDERTLRYLRTVDVSASYPYAYGFIIGT
                     VSGDDDAVDCFVLTTEPLVAGTMLECDLIGLLEQVEDGEIDHKVLAVPSWAYATVDEA
                     VIAALKKFIFGVFADVPNKRMEIGRLLGRDAAESYVRQCRGGLGSAT"
     gene            complement(561..1694)
                     /locus_tag="VIY07_04750"
     CDS             complement(561..1694)
                     /locus_tag="VIY07_04750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6381095.1"
                     /translation="MARIEAVEAALAGIAHDIRTPLTGIVALAELLVSSDLGTREREW
                     ANAIKSGADHLAALSTLIVDAAKESAKGLVFRDESFSPVEIAETVGAALGARAASKDL
                     KAEIEIARDLPRMVLGDPIRLRAMLENLADNAVKFTEAGTVRFSADAEQAGRNGVRLI
                     FTFADNGIGISETELKQLFRPFAQASVDVAKRYGGAGLGLAFVKRVAKAMGGELQATS
                     RKGSGSTFRLTVLAKPMEATPVAERINTALTPVRALSILCAEDNPYGRVVMNTILREL
                     GHRVDFVETGGAAIEAIARGDYDAVLMDVTLGGLNGIEATRRIRALPGKAGQTPIVAV
                     SGHSNSSEEQAARAAGMNVYLKKPVSPRKLAQVLGNLAKQQLS"
BASE COUNT          348 a          532 c          504 g          390 t
ORIGIN      
        1 agattgaggc ccaattaata taggggcaac ggcagattca tgcaggtctt tattgaaaac
       61 gaggccggtt cgcgacgcaa gaatatctac gacgagcgca ccctgcgata tcttcggaca
      121 gttgatgtat cggccagcta cccatatgcg tacggtttta ttattggcac tgtcagcggc
      181 gatgacgatg cagttgactg ttttgtacta acaacagaac cgctcgtcgc gggtacaatg
      241 ctggaatgtg atctcatagg actgctggag caggtggagg acggcgagat tgaccataag
      301 gtgcttgccg tcccctcctg ggcctatgca acggttgatg aggccgtcat tgcggctcta
      361 aaaaaattca tcttcggtgt ttttgccgac gttccaaaca aacgcatgga aattggccgc
      421 ttgctaggcc gagatgccgc tgagagctac gtgcgccaat gccgtggtgg tcttggctcg
      481 gctacgtgat gagtgcaatc gcaaatctca caaaaaaatt cttgacgggg cgcaaccgac
      541 gttcgagggg tccgcctcgc tcaggacaat tgttgtttgg cgaggtttcc cagcacctgc
      601 gccagctttc gcggactgac cggctttttc aaatagacgt tcatgcccgc cgcgcgggca
      661 gcctgctcct cgctgctgtt gctgtgccct gacaccgcga caattggcgt ctgtcctgcc
      721 ttgcctggca acgcgcgaat tcgccgcgtc gcctcaatgc cgtttagtcc cccgagcgtg
      781 acatccatca agacagcatc atagtcgccg cgtgcgatgg cctcgattgc ggcgccgcct
      841 gtctcgacga aatctacgcg atgacccagt tcacgcagga tcgtgttcat cacgacgcgg
      901 ccatacggat tatcctcagc acacaagatg gacagggcgc gcaccggcgt cagggcggtg
      961 ttgatccgct cggccaccgg agttgcctcc atcggcttgg cgagcacggt gagccgaaac
     1021 gtagagccgc tgcccttcct gctggtcgcc tggagttcgc ctcccatcgc cttggcaacg
     1081 cgcttgacga aagcgagacc gagccctgct cctccgtagc gcttggcgac gtcgacgctc
     1141 gcctgcgcaa agggacgaaa aagctgcttc aattcagtct cgcttatgcc aattccgttg
     1201 tcggcaaagg taaatattaa tctcacgcca ttccgtcccg cctgctcggc atcggcggaa
     1261 aagcgcacag tgccagcttc ggtaaatttc acggcattgt cggcgagatt ttcgagcatt
     1321 gctcgcaatc gtattgggtc gcccagtacc attctgggca gatcgcgcgc gatctcaatc
     1381 tccgccttca ggtctttact ggcggcgcgc gcacccaagg ctgcgccgac agtttccgcg
     1441 atttcgactg gcgagaagga ctcgtcgcga aagacaagcc ccttggcact ctctttcgct
     1501 gcatcgacaa tcaacgtcga aagcgcagcg aggtgatcgg cgccactttt gatcgcgttt
     1561 gcccattcgc gttcgcgcgt accgaggtcg gaggagacca acaattcggc caatgctacg
     1621 atgccggtca gcggcgtgcg gatatcgtgc gcaatgccgg cgagtgcggc ctcgaccgct
     1681 tctatacgcg ccaagcctgt tccgcgcgcg cgcgctgacg acgaacggac tcgcctggca
     1741 ggcctcttgc gcttccgctt ggccattgtc cctt
//
LOCUS       DATDHO010000239         3684 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_208938, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000239 DATDHO010000000
VERSION     DATDHO010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3684)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3684)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3684
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_208938"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            36..1280
                     /locus_tag="VIY07_04755"
     CDS             36..1280
                     /locus_tag="VIY07_04755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEY6381096.1"
                     /translation="MAAAKDPPTVVAQAGTEKLDALKQRDQELKAVRDKQRKSADTEA
                     TLRREIEQIGADRSKLNQDLIDTAGRLRAVESKIAATQDRLKPLDENEHSIRKSLDGR
                     RAVIGEVLAALQRIGRRPPPALIATPEDALQSVRTAMVIGAVLPHMRHEVEALANDLS
                     DLIALRKKIDAEREQLRAEVASLDAERTRMTALVDERQRQLADREKALDAERTRAGGL
                     AREVDNLKDLIAKLEQGLDANTRETREAARSDGRPALSAFRDSGRLAPAVAFASLRGQ
                     VPVPVNGVKLKEFGAPDGSGGSEKGLSIATRAGAQVTAPADGWVVYAGAFRSYGQLLI
                     LNVGGGYHVLLAGMERISVDLGQFVLTGEPVALMGNGSHIAAVLATGSSQPVLYVEFR
                     KDGTPVDPGPWWAAGEVEKVRG"
     gene            1277..2614
                     /locus_tag="VIY07_04760"
     CDS             1277..2614
                     /locus_tag="VIY07_04760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEY6381097.1"
                     /translation="MMRKTSLILLGAAAGAALTLFAVQPRVMLVGATAKAAAADTYRQ
                     LNLFGDVFERVRADYVERPDDGKLIETAINGMLAGLDPHSSYMDAKSFRDMQVQTRGE
                     FGGLGIEVTMEDGLIKVVAPIDDTPAAKAGVMANDIITKLDDEQVQGLTLNQAVEKMR
                     GPVNTKIKLTITRKGQDKPVEVSITRDVIRVRSVRSQVEGEDIGYIRLTQFNEQTTEG
                     LKKAISDISAKISEDKLKGYVLDLRNNPGGLLDQAISVSDAFLQKGEIVSTRGRNAEE
                     TQRFNARAGDLTKNKPLIVLINGGSASASEIVAGALQDHRRAAVIGTRSFGKGSVQTI
                     IPLGSGNGALRLTTARYFTPSGRSIQAKGISPDIEILQDVPDELKTKTDTKGEASLRG
                     HLKGDEGKEQTGSQSYIPPDAKNDKALNMAFDLLRGIQVNSAFPPNSKAPVPN"
     gene            2765..3061
                     /locus_tag="VIY07_04765"
     CDS             2765..3061
                     /locus_tag="VIY07_04765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381098.1"
                     /translation="MVDDLNAPPGQDKQKRLPNLPVSAPQLLAGALGLSGVVVVAWAA
                     FVNDPLGGEPIAVVATKVAPTSVSSGQRQGWQAAFPPRRHNLLATRCFGARGEA"
     gene            3129..>3684
                     /locus_tag="VIY07_04770"
     CDS             3129..>3684
                     /locus_tag="VIY07_04770"
                     /inference="COORDINATES: protein motif:HMM:NF016623.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HEY6381099.1"
                     /translation="MTIPGNPDATKPFFDPKLVEATRHGAVPKIGPDGARPSSRYAQP
                     RQLPPNKKDSPLIAIIVGGVGISTSGTADALAKLPASVTFALTPYGADLEKLAERARS
                     QQHEILLQVPMEPFDYPDNDPGPQTLLTSLTSEQNLDRLHWLMSRFQGYVGLMNYMGA
                     RFTASEQELTAVLRDAAQRGLVYVD"
BASE COUNT          765 a         1138 c         1128 g          653 t
ORIGIN      
        1 cgcttgtcgc agggctcgcg gtcacgttgc cgttcatggc agcggcaaaa gaccccccga
       61 ctgtcgtcgc gcaagccggc acggaaaagc tcgatgcgct gaagcagcgt gatcaagagc
      121 tcaaagccgt tcgcgacaag cagcgcaaat cggccgacac ggaagcgacg ctcaggcgcg
      181 agatcgaaca gatcggtgcg gaccgaagca agctcaatca ggacctgatc gatacagccg
      241 gtcgtttgcg cgccgtggaa tccaaaatcg ccgcgacgca ggaccgcctg aaaccgcttg
      301 acgagaacga gcacagcatt cgcaaatcgc tcgatggacg tcgcgcggtc attggcgaag
      361 ttcttgcggc cctgcaacgc atcggtcgcc gtccgcctcc ggcgctcatc gccaccccgg
      421 aagatgcgtt gcagtcggtt cgcactgcca tggtgattgg agcggtattg ccgcatatgc
      481 gtcacgaggt cgaggcactg gccaacgacc tttctgactt gattgccctg cgcaaaaaga
      541 tcgacgccga acgcgagcag ctgagagcgg aagtggcttc gctcgatgca gagcgcacac
      601 gcatgacggc actggtggac gaacgacagc ggcagctggc tgaccgagaa aaggctctcg
      661 acgcagagcg gacgcgggcc ggcggtctcg cgcgcgaggt cgacaatctg aaagacctga
      721 tcgccaaact tgaacagggg ctcgacgcga acacacgcga aacgcgcgag gcagcccgct
      781 ccgatggccg cccggcgctt tcggcgtttc gcgactctgg acggcttgcc cccgcggtcg
      841 cttttgcctc attgcgcgga caagttccgg ttccggttaa cggcgtcaaa ttgaaggaat
      901 ttggcgcccc cgacggtagt ggagggtctg aaaagggcct ttccattgca acgcgcgcgg
      961 gcgcccaggt cacagcacca gccgacggtt gggtcgttta tgccggggct ttccggtcct
     1021 atggtcaact cttgatcctc aatgtcggcg gcgggtatca tgtcttgctc gctgggatgg
     1081 aacggatatc agtcgatctc gggcagttcg tactgaccgg ggaacccgtt gcgcttatgg
     1141 ggaacggctc ccatatcgcc gctgtcctcg cgaccgggtc cagccaacca gtgctatacg
     1201 ttgagtttag aaaagacggg actcccgtcg atccaggccc atggtgggca gctggcgaag
     1261 tcgaaaaggt tcgcggatga tgcgcaagac gtctcttatt cttctcggag cggcggcagg
     1321 agcggcacta actctgttcg cggtccagcc tcgcgtgatg ctcgttggag cgacggccaa
     1381 ggcagcggcg gccgatacat atcggcagct gaatctgttc ggcgacgttt ttgagcgcgt
     1441 ccgcgccgat tacgtcgaaa gaccggacga cggcaaactg atcgaaactg cgatcaatgg
     1501 catgcttgcc ggcctcgatc cgcactccag ctacatggac gcaaagagct tccgtgacat
     1561 gcaggtgcaa acccgcggcg aattcggcgg cctcggcatt gaggtcacca tggaagacgg
     1621 gctgatcaag gtcgtcgcgc cgatcgatga cacgcctgcc gccaaagccg gcgtcatggc
     1681 taacgacatc ataaccaagc tcgacgatga gcaggtgcag ggactgaccc tgaaccaggc
     1741 tgtcgagaag atgcgcggtc cggtgaacac caagatcaag ctgacgatca cacgcaaagg
     1801 ccaggacaag ccggtcgagg tttcgatcac gcgcgatgtc atccgcgtgc ggtcggttcg
     1861 ctcgcaggtc gaaggcgagg atatcggata tatccggctc acgcagttca atgagcaaac
     1921 aactgaaggg ctgaaaaagg caatttccga catctcggcg aagatctcgg aagacaagct
     1981 gaagggttac gttctcgatc tccgtaacaa cccaggcggc ctgctcgacc aggcgatttc
     2041 agtatccgac gcatttctgc agaagggcga gattgtgtcc acccgcggcc gaaatgcgga
     2101 ggaaacacag cgcttcaatg cgagagccgg cgatctgaca aagaacaagc cgctcatcgt
     2161 tctgatcaac ggcggctcgg catccgcttc tgaaatcgtc gcgggcgcgc tgcaggatca
     2221 caggcgggca gccgtgatcg gcacccgctc gttcggcaaa ggatcggtgc agaccatcat
     2281 tccgctcggg tctggcaatg gtgccttgcg gctgacgacg gcacgctact tcacgccgtc
     2341 cggccgttcg atccaggcaa agggcatttc gccggacatt gaaattctcc aggacgttcc
     2401 ggacgagctc aagacgaaaa ctgacaccaa gggcgaggcg tcgctgcgcg gtcatctgaa
     2461 aggcgacgag ggcaaagagc agaccggctc gcaatcctat attccgcccg atgccaagaa
     2521 cgacaaagct ctcaacatgg cgttcgatct tctgcgcggc atccaggtca attcggcctt
     2581 cccgccgaat tccaaggcac ccgtgccgaa ctgatccaat ttgcgtttcg cattcgcggg
     2641 ggcggctgaa aggcctcccc cgccgcttct tggggcttta gcctcctcgc tgcctgccgc
     2701 gacatgactg tgacagaaac gacgcgtgct agactcgcgc aatgattcgc ggggatcttg
     2761 cgccttggta gacgacctga acgcgccccc cggccaggac aagcaaaagc ggctgccgaa
     2821 cctacctgta tccgcgcccc agttgcttgc aggcgcgctg gggctttcgg gcgtggtcgt
     2881 cgtggcctgg gcagctttcg tcaatgaccc gctgggcggc gagcccattg ccgtggtggc
     2941 cacaaaggtt gcgccgacct cggtgagctc gggacagcga cagggatggc aagcagcatt
     3001 cccgccacga cggcacaacc tcctcgccac ccgatgcttc ggcgcccgcg gcgaagcctg
     3061 acgagacgcc gccgcccggc tcgaggaccg taacgattat cgacggctcc agcggcgcaa
     3121 ggaagttggt gaccatccca ggcaatcccg atgccacgaa gccgtttttc gatccaaagc
     3181 tggtcgaagc cacccgccat ggcgccgttc caaaaattgg acctgatggc gcgcgtccat
     3241 ccagccggta tgcgcaaccc cgccagctgc cgcccaacaa aaaagattcg cccctgatcg
     3301 ccatcattgt tggcggggtc ggcatcagca cgtcgggcac cgccgatgcg ctcgccaaat
     3361 tgcccgcgtc ggttactttc gcgctgacgc cttacggcgc cgatcttgaa aaactggccg
     3421 agcgcgcccg gtcgcagcag cacgagatcc tgctgcaggt gcccatggag cccttcgact
     3481 atcccgacaa cgatcccggt ccgcaaacgc tgctgacctc gttgacctcg gagcagaatc
     3541 tcgaccggct acattggctg atgagtcgtt tccaaggcta cgtcggtctc atgaactata
     3601 tgggcgcgcg atttactgca tcggagcagg aactgacggc ggtcttacgc gacgccgcgc
     3661 agcggggtct tgtctatgtt gacg
//
LOCUS       DATDHO010000240         2800 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_58945, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000240 DATDHO010000000
VERSION     DATDHO010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_58945"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(183..1247)
                     /locus_tag="VIY07_04775"
     CDS             complement(183..1247)
                     /locus_tag="VIY07_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381100.1"
                     /translation="MTVREANLTASSSADREPELFETAGTARLHLTLATADYDHVRDL
                     TTGAVRAEGILFTAFVLPVEEIFYRFIKNREWDVSEMSFGKFIGYAAQGNSPFVGIPV
                     FPSRVFRHSAFYVRSDRGISHPRDLEGKRVGIPEWAQTAGIYARGFLSETAGVDLRKV
                     QWVQAGMNEAGREEKVEFKLPDGIHYEQRCDTTISAMLLSGEIDAAISARVPDAFDNS
                     GGRIVRLYPDYRAQEMDYHAATGIYPIMHVIAMRRVVFERYPWVAMNLFKAFDEARRR
                     SLERIRDLTASRIPVPWAASIAGEWSRNFGDDPFPYGLEQNRRTLDAFCRFAHAQGVT
                     AKKLAPDDLFPKEVRASARV"
     gene            1389..>2800
                     /locus_tag="VIY07_04780"
     CDS             1389..>2800
                     /locus_tag="VIY07_04780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family peptidase"
                     /protein_id="HEY6381101.1"
                     /translation="MKRAVLVGLALLMAAPAAAEEMNTPQVSRARIDWNAAAASLAGP
                     ASGTPAETFARLNVTAEAGFPGISNSTVPVLLPFDIDGFAKALTSNQDQSTDKMAESA
                     DRFMRSGFQATKFFLTGPAGYDAAFGLILANVPDLSEIRYSEPVYVLLSGLGMTYELD
                     GPALPGGELITSLQRDFPGIRRYLHESYIRYSFQRYGVTYVAAIYCRDTKPRTKILTC
                     RQADRVMDRFLRALRLVGGTPASDIPAEKFVLDRPKEQSKDFSYFSPGLLIPNTGLSK
                     NSTGRADYTVYARLRFPLKDAPAFANSQSFNNWGDCDFTGRSVRSPRRKDQPYSCKVN
                     GRPLVFNEGAPGNYSYPWRDNFCEHRRFFVGQCPGGEGHQGQDIRPSVCKLLNGGADR
                     CQPYQHDVVAAHDGFILRARKQEAVYIFINTPSTHARVRYMHMNPNRLDADGILSGKL
                     VHEGDSIGKVGNYNHRERGTT"
BASE COUNT          567 a          854 c          818 g          561 t
ORIGIN      
        1 ccaagttgga ccgtggtcca atccggacca tccaatgtcc gctttgggtc ataagcagac
       61 atttcgcatc gcacgcgcca tgtctgcttt acccccgaaa gcagacatca agaggcgttc
      121 tccgtcggcg cgaatgaacc cgttggtggt cttgccactc tgcgcggctg cggtggtcgg
      181 gcctataccc ttgcgctcgc gcgcacttcc ttggggaaca gatcgtcggg cgcaagtttc
      241 tttgctgtca cgccttgcgc gtgagcgaag cggcagaacg catccagcgt cctgcgattt
      301 tgttcgagcc cgtacggaaa aggatcgtcg ccgaaatttc tactccattc gccggcgatg
      361 gatgcagccc agggcacggg aatacgtgac gcggtcagat ctcggattcg ctcgaggctc
      421 cgccgccggg cctcgtcaaa tgccttgaaa agattcatcg caacccaggg gtagcgctcg
      481 aagactacac gacgcatcgc gatcacatgc atgatcggat agatgccggt ggcggcatgg
      541 tagtccatct cctgggcgcg atagtcgggg taaagccgaa cgatcctgcc gccgctgttg
      601 tcgaatgcgt ccggcacgcg tgccgagatc gcggcatcga tctcgcctga cagcagcatc
      661 gcagaaatag tcgtatcgca acgctgctcg tagtgaatcc catccggcaa cttgaattcc
      721 accttctcct cgcggccggc ctcgttcatg ccggcttgaa cccattgtac tttccgcaga
      781 tccactccgg ccgtttcgga cagaaatccg cgcgcataga tgccggcggt ttgtgcccat
      841 tccgggatgc ccacgcgctt gccctccaga tccctgggat gggagatgcc gcggtcggag
      901 cgcacgtaga atgccgagtg ccggaacacg cgagacggaa agacggggat tccgacgaac
      961 ggagaattgc cttgagcggc atagccgatg aatttgccga aggacatctc ggacacgtcc
     1021 cattcgcggt tcttgatgaa cctgtagaag atttcctcaa caggcaggac gaaagccgta
     1081 aacagaattc cctccgcacg cacagcgcca gtcgtgagat cgcgcacgtg atcgtagtcg
     1141 gcggtggcga gggtcagatg caggcgggcg gttcccgcgg tttcgaagag ctcgggttcg
     1201 cgatcggcac tcgaggatgc agttaaattg gcttcgcgta ccgtcatttc actaccactc
     1261 tcccacgtcc atgcggcagg gcactgggcc gcaccctaca cccttgtatg ccgcagtgcg
     1321 atgaacttaa cttctacaac ggagtctcac cgagccttcg ctggcgggga agaacgaggg
     1381 aagccggatt gaaacgcgcc gtacttgttg gccttgcctt gcttatggcg gctcccgcgg
     1441 cggcggagga aatgaacact ccgcaggtct cgcgcgcgcg aatcgactgg aatgctgcag
     1501 cggcgagcct tgccggtccg gcatcgggga ccccggcgga gacgttcgcc aggctcaatg
     1561 tgactgcaga agcgggtttt cccgggatct ccaacagcac ggtgccggtg ctgctaccgt
     1621 tcgatatcga cggttttgcg aaggcgctca ccagcaatca ggaccaatcg accgacaaaa
     1681 tggcggaaag cgcggatcgc ttcatgcggt ccggcttcca ggcaacgaaa tttttcctga
     1741 ccggccccgc gggatacgac gcggcattcg ggctgatact cgctaatgtc ccggatctgt
     1801 cggaaattcg ctattccgag cctgtttatg tcctgttgtc gggtctcggc atgacttacg
     1861 agctcgatgg acctgccctg ccgggaggcg agctgattac atcgctgcag cgcgattttc
     1921 ctggcattcg ccgttaccta cacgaatcct atatccgcta cagcttccag cgctatggcg
     1981 taacatacgt cgccgccatc tactgtcgcg acaccaagcc tcgcacaaaa attctcacct
     2041 gcagacaggc cgaccgcgtc atggatcgct tcctgcgggc gcttcggctt gttgggggta
     2101 cgccagcgag cgacattccg gccgaaaaat ttgtgctcga caggcccaag gaacaatcaa
     2161 aggatttctc ctatttcagc cccgggctcc tcatccccaa tactgggctt agtaagaaca
     2221 gcacaggccg ggccgactac accgtctatg cgcggctgcg cttcccgctc aaagatgcgc
     2281 cagccttcgc caattcgcag tcgttcaaca actggggtga ttgcgatttc accgggcgct
     2341 ccgtacgcag cccacgcaga aaggatcagc cctattcatg caaggtgaac ggcaggccgc
     2401 tggtcttcaa cgagggcgcg ccgggcaact actcgtatcc ctggcgcgat aacttctgcg
     2461 agcatcgccg ctttttcgtt ggccagtgtc ctggcgggga aggtcatcaa ggccaggaca
     2521 tccggcccag cgtctgcaaa ttgctcaacg ggggcgcgga tcgctgtcaa ccctaccagc
     2581 atgatgtggt agccgcgcac gacggattta tcctgcgcgc gcgcaagcag gaggccgtgt
     2641 atatttttat caatacgccg agcacgcatg cgcgcgtgcg ctacatgcat atgaatccga
     2701 accggctcga cgcggacgga atcttgagcg gcaaactcgt gcacgagggc gattcgatag
     2761 gcaaggtcgg caattacaat catcgcgagc gcggcacgac
//
LOCUS       DATDHO010000241         6774 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_159488, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000241 DATDHO010000000
VERSION     DATDHO010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6774
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159488"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1514
                     /locus_tag="VIY07_04785"
     CDS             171..1514
                     /locus_tag="VIY07_04785"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEY6381102.1"
                     /translation="MQRVLVANRGEIALRAVRACRKLGLQSVAVYSEADRNSPHVWAA
                     DRSICIGPPPPALSYLNAAGLIEAARGTGCDAIYPGYGFLSEKSAFAASCCEEKLTFV
                     GPTPEAISAMGDKVEARRIAAHNGVPVVPGSLQGFTDAEVASKVAADIGFPLLLKAAG
                     GGGGRGMRIAASMGEFGALFAQASAEAAAAFGNPEIYLERFFPKVRHIEIQVFGDKHG
                     NAVHLWERDCSIQRRHQKLVEEAPSPVLPADVRREMAEATLALIRNLKYEGAGTIEFI
                     FDPDSGRWYFIEMNTRIQVEHPVTEEVFGVDLVAEQLRVAAGEPISFRQPAPPNGRCA
                     IEFRINAEDPRNGFRPSPGVVSSWSPPNGQGIRLDSHVYASYSVPPYYDSLLGKLIIS
                     GDSRAEVLTTSASALARFRVSGVHTTIPFHARLLDSERFIDGTAHTRWVEQEMPA"
     gene            1511..2974
                     /locus_tag="VIY07_04790"
     CDS             1511..2974
                     /locus_tag="VIY07_04790"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006761.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate carboxylase subunit B"
                     /protein_id="HEY6381103.1"
                     /translation="MTRKISLIDVTLRDAHQCLWATRMTTAMMSQIAPMLDKAGFEAI
                     DLVGGAVFDVCVRYLREDPWERMRIVSSWVKQTPLIVMTRGQSLFTFEFFPDDIVALT
                     AERIYANGIRYHTPYDALNDVRNMEVPVRAGKKAGLYVDAGVVYTLSPVHSDDYYARK
                     IRELRALGADAIFLKDPSGLLTPERAETLIPVAKAACGTLPLQLHSHCLTGLAPYVAV
                     QAIELGVDVVHTATSTLANGASHPATETFIDNIHRRRYRTGIDRTLVEQVAERLRYIA
                     TRENKPVGHILEHDSFHYEHQMPGGMISNLKSQLTTLGISNKLPQILEEAATVRRELG
                     YPIIVSPFAQFVMTQAVLNVMGKERYATVPDEVRKYVMGYYGEIAGPIDPDIYDRITD
                     GAEPIKARPGDLLEPGIKRVRRERGPFRSDDDLLLAAYYTDNEYKALEAAGPIKTEYP
                     LASTPLETLLKEITLRSDIKSFYFGRRRPGLIEARIN"
     gene            2971..3801
                     /locus_tag="VIY07_04795"
     CDS             2971..3801
                     /locus_tag="VIY07_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009468158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HEY6381104.1"
                     /translation="MTQPTIITCAITGALPRKAQTPAVPVTPAEQIESTHEAYEAGAA
                     LVHIHVRNKDESPSSDPELFALVQEGVKKHCPGMIIQFSTGGRGRSQNERGRALYLKP
                     DMASLATGSVNFPKQIYENPPDLVDDLARSMLEFGVKPEIEVFDLAMLYNARDLAERG
                     LIRKPLHLQFVMGIPNALPARRKVLEFLVSELKDIMPDATWAAAGIGRHQLEINEWTL
                     ALGGHVRTGLEDNIKFDRDRLAKSNAELVERLRNLCGQYGRHAASPKEARNILGLAAM
                     "
     gene            3855..4574
                     /locus_tag="VIY07_04800"
     CDS             3855..4574
                     /locus_tag="VIY07_04800"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY6381105.1"
                     /translation="MSTNELAVIVIVTLAGFMRGITGFGGAMLMAPPLSMLIGPVPTV
                     VTALILETAAALVMFPDAWPKINKRILLYLTIPACFTVPIGGYLLITLDPFIARKVIA
                     AVVVVFSLGLLAGLRYSGSQRPLTSVVLGGIVGVLLGSTSVGAPPVILYLLSGPDPQA
                     VTRANLTVFVTAISVIGLVMLVVAGAATGSLAVSALLLCIPYLSGTWVGGKLFGKLAE
                     LTVRRIALFFMLTMGLVSLTV"
     gene            complement(4737..5792)
                     /locus_tag="VIY07_04805"
     CDS             complement(4737..5792)
                     /locus_tag="VIY07_04805"
                     /inference="COORDINATES: protein motif:HMM:NF015558.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative sulfate exporter family transporter"
                     /protein_id="HEY6381106.1"
                     /translation="MSAEEMKAFRPSMATATALAPGVILSAIVAAIGYIAAPYVARVI
                     PIPSMVIALVVGIALNPLAAGPAVQPGMNFCVKTLLRWAVALLGLRVGLGDIAALGAE
                     TAILIVIAMVATVASGFIFARWSGQAPGFGALVGAGTAVCGASATLATSTVVPEYKGK
                     KADIAFVVVAVNALATLTMLLYPSLCILIGFDAQTTGVMLGATIHDVAQVVGAGYAVS
                     EPVGNTAVIVKLFRVFLLLPVVLGVGWYFTRLGVRHGEAQVPVPVFAIVFLLLCMVNS
                     AMSLMPSMVPIYTPIKGILVEVSTWGLLLAIGALGLGTSVKTIIGLGWRHITTALGAT
                     AVIFIIVTGGLLLLKLV"
     gene            complement(5805..6710)
                     /locus_tag="VIY07_04810"
     CDS             complement(5805..6710)
                     /locus_tag="VIY07_04810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-CoA synthetase subunit alpha"
                     /protein_id="HEY6381107.1"
                     /translation="MIVRKKDRVVVLGITGKQGTFWTEKMIAYGTNVVAGVNPKRAGE
                     THVGIPICASTVEAVEKHGGEVGVMFIPPPMAKDAAVSAAQAGIKLLVVLTEHIPAQD
                     VMEIHVAAATFGTRIVGPNTAGLVTPGECFTGIMPAFVPSVFKAGRVGVISRSGSLGT
                     LICLNLTRAGVGQSAFIGIGGDPMLGTTTRDALETFDRHAGTDSVVIVGEIGGAMEEN
                     AADYAKRMTKPMVAFIAGAAAPPGKKMGHAGAIVTGNAGSYASKRQALEAAGVTVVDT
                     PSQIAEAVGAGLKARRTGSAVALSE"
BASE COUNT         1362 a         2053 c         2026 g         1333 t
ORIGIN      
        1 gagggaccgc cggatccccg cgatctggac gagacagcag gtccctgcag tctcccggca
       61 tttggggtca acgtcatctt aattatcaaa aactgaaaaa aagagtgttg caagatgatt
      121 ttttgttctg ccagagttag gactgagcct gcaaccaaga ggcgaagccg gtgcaacggg
      181 tgctcgtcgc caaccgcgga gagattgcgc tgcgggccgt gcgcgcctgc cgcaagttgg
      241 gcctgcaatc ggtggcggtt tattccgagg cagaccgcaa ttctccacat gtctgggccg
      301 ctgatcgcag catctgcatc gggccgccgc cgccggcgct gagctattta aacgccgccg
      361 gactcatcga ggcggcgcgc ggtaccggct gcgacgcgat ttatccgggc tacggattcc
      421 tgtcggagaa aagcgcattc gccgctagct gctgcgaaga gaagctcact tttgtcgggc
      481 ccaccccgga agcaatcagc gcgatgggcg ataaggtcga agcgcgacgg atcgccgcgc
      541 acaacggcgt ccccgttgtg cccggttcgt tgcagggatt taccgatgcc gaagtggcgt
      601 cgaaggttgc cgcggacatc ggcttcccgt tgctgctaaa agccgcgggc ggcggtggcg
      661 gccgcggaat gcgaattgcc gcgagcatgg gcgagtttgg tgctctcttc gcgcaggcct
      721 cggccgaagc cgcggcggcg ttcggcaacc cggagatcta tctcgaacgc tttttcccga
      781 aagtgaggca catcgagatc caggtcttcg gggataaaca cggcaatgcc gtgcatttgt
      841 gggagcgcga ttgcagcatc cagcgccggc atcaaaagct tgttgaagag gccccgtcgc
      901 ccgtgctgcc tgcagacgta cggcgggaga tggcggaagc taccctcgcg ctcatccgca
      961 atctgaaata cgagggcgcc ggcaccatcg agttcatttt cgaccccgac agtggccgtt
     1021 ggtacttcat cgagatgaat acgagaattc aggtcgagca tccggtgacg gaggaagtct
     1081 ttggcgtcga tctggtggcc gaacagctcc gcgtcgcggc cggcgagccg atttcgttcc
     1141 ggcagccggc gccgcccaat gggcggtgcg caatcgagtt ccgcatcaat gcggaggatc
     1201 cgcgcaacgg gtttcggccg tcgccgggcg tagtgtcgtc atggtcgccg ccgaacggac
     1261 aaggcatacg cctggacagt cacgtgtatg cttcttattc ggtcccgcca tactatgact
     1321 cgctgctcgg caagctcatc atcagcggcg acagccgcgc agaagtgttg acaacatcgg
     1381 cctcggcgct ggcccgtttc cgcgtctcgg gtgttcacac gacgattccg tttcacgccc
     1441 gattgcttga tagcgaacgc tttatcgacg gcaccgccca tacgcgctgg gtggagcagg
     1501 agatgccggc atgacgcgca agatttcgct gatcgacgtg accttgcgcg atgcgcatca
     1561 atgcctctgg gcgacccgaa tgacgacggc aatgatgtcg cagatcgcac ctatgctcga
     1621 taaagcggga ttcgaagcta tcgacctggt cggtggagcg gtgttcgatg tctgtgtgcg
     1681 ctaccttcgc gaagacccgt gggagcgcat gcgtatcgtc agctcgtggg tcaagcagac
     1741 gccgctgatc gtgatgaccc gcggccaaag cctattcacc ttcgaattct ttcccgacga
     1801 tatcgtcgcg ctaaccgccg agcggatcta cgccaatggt attcgttatc acacgccgta
     1861 tgacgcgctg aatgatgtcc gcaacatgga agtaccggtg cgagcgggaa aaaaggccgg
     1921 tctctatgtc gatgccggcg tggtctacac gttaagtccg gtccatagcg acgactatta
     1981 cgcgcgcaag atcagggagt tgagggcact cggggcggat gcgatttttc tcaaggaccc
     2041 gagcggattg ctcacgccgg agcgcgcgga aacgcttatt ccggtagcga aggcagcctg
     2101 cggaacgttg ccgctgcaac tgcattcaca ttgtctgact ggacttgcac cttatgtagc
     2161 ggtacaggcg atcgaactcg gtgttgacgt cgtgcatact gccacctcga cgctcgccaa
     2221 tggcgcctcg catccggcga ccgagacatt catcgacaac attcatcgtc gccgctaccg
     2281 aaccggcatc gaccgcacgt tagtcgagca agtggccgag cgcttacgtt acatagccac
     2341 ccgcgaaaac aagccggtcg gacacattct cgagcatgat tcctttcatt atgagcacca
     2401 gatgccggga ggcatgatct cgaatctgaa atcgcaactc actacacttg gcatttccaa
     2461 caaattgccg caaatccttg aagaggcggc gacggtgcgc cgcgaattgg gttacccgat
     2521 tatcgtcagt ccctttgcgc aattcgtcat gacccaggcc gttcttaatg tcatgggcaa
     2581 ggaacgctat gcgacggtcc ccgacgaggt ccgcaagtac gtcatgggtt actacggcga
     2641 aattgccgga ccgatcgatc ccgacattta cgaccgcatc accgacggtg cagaacccat
     2701 caaggcgcgc ccgggcgatc tgcttgagcc gggcattaaa cgcgtgcggc gtgaacgcgg
     2761 accgttccgt tccgatgacg acctgctgct tgccgcatac tatacagaca atgagtacaa
     2821 agcactggaa gcagcaggtc cgatcaaaac cgaatatccg ctggcatcaa cgccgcttga
     2881 aacgctgtta aaagagataa cgttgcggtc cgacatcaag tcattctatt tcggccggcg
     2941 ccgccccggc ctcatcgagg cgcggataaa ttgacgcaac cgactatcat tacctgtgca
     3001 atcaccggcg cgctgccgcg aaaggcgcag acccctgcag tgcccgtgac accggccgaa
     3061 cagatcgagt cgacacacga agcatatgag gccggcgcag cgctggtgca catacatgtg
     3121 cgcaacaagg atgaaagtcc gtcatccgat ccggagttgt tcgcgttggt gcaggagggc
     3181 gtgaaaaagc actgcccggg gatgatcatt cagttctcta ccggaggccg cgggcgcagc
     3241 cagaacgagc gagggcgcgc gctttatctc aaacctgaca tggcttctct cgcaaccggc
     3301 tcggtcaatt ttcccaagca gatctacgag aatccgcccg acctggtgga tgacctcgcc
     3361 cgctcgatgc ttgagttcgg cgtaaagccc gagattgagg tgttcgatct cgcgatgctt
     3421 tataacgcgc gcgatctcgc cgagcgcgga ctgatcagaa agccgttgca cctgcaattc
     3481 gtcatgggca ttccgaatgc cctgccggca cggcgcaagg tgctggagtt tctggtgtcg
     3541 gagctcaagg acatcatgcc cgatgccacc tgggcagccg ccggcatcgg gcgtcaccag
     3601 ctcgagatca acgagtggac actcgcactc ggagggcatg tgcgtacagg ccttgaagac
     3661 aatatcaagt ttgaccgcga tcgcctcgcg aaaagcaatg cagagctggt agaacgattg
     3721 cgtaatctgt gcggacaata tggtcgccac gctgcaagtc cgaaggaagc gcgcaacatc
     3781 ctcggcctgg cagcaatgtg aattcaggct tgtatcgatg acgccatgag ctgctcgcat
     3841 tgtcggggct ggcaatgagc acgaatgaat tggcggtgat cgttatcgtc accctcgcgg
     3901 gatttatgcg gggcattaca ggatttggcg gggccatgct tatggccccg ccgctgagca
     3961 tgcttattgg accggtgcca acggtggtga cggcacttat cctggaaacg gccgccgcgc
     4021 tcgtgatgtt tcccgatgcc tggccgaaga tcaacaaacg catcctcctc tatctcacaa
     4081 ttcccgcatg cttcactgtt ccgatcggcg gatatctgct catcacgctg gatccattta
     4141 tcgcgcgcaa agtcatcgcc gctgtggttg tcgtgttcag tctcggcttg ctggccggtc
     4201 tgcgctattc tggatcgcag cggccactga catccgtagt gctcggtggc atcgtcggcg
     4261 tgctgctcgg ctcaacgagc gtcggcgctc cgcctgtgat cctttacctg ctgtccggtc
     4321 ctgaccccca ggcggtgaca cgcgccaatt tgaccgtttt cgttaccgcg atttcggtga
     4381 tcggccttgt gatgcttgtc gtggcgggcg ccgcgaccgg gtcactcgcc gtttcagcac
     4441 tcctgctttg tatcccgtat ctgtccggga cctgggtcgg aggaaagctg ttcggcaagc
     4501 ttgctgagct gactgtccgg cgaattgcct tgttctttat gcttacgatg gggctggtga
     4561 gtctgaccgt gtaaggcggc ctaatcacgc cgtcatgtcg gcgaatgggg ctgccagcgg
     4621 acattcagtt cgagccaaca tttgcttttt ttgaagttag cggactaaag cacgtaatgg
     4681 ggtgatctct ctggactaaa gacgcttggt cttaccaagt cgcacccctc gcctcctcac
     4741 accagtttca gcaacaataa accgccggtt acaattatga agatgacggc ggtggcgccg
     4801 agcgcggtag taatgtgtcg ccagccgagg ccgataatcg ttttcacgga agtgccgagc
     4861 ccgagcgcac cgatggcgag cagaagaccc caggtcgaca cttcgaccag tatgcctttg
     4921 atcggcgtgt agatcggcac catcgacggc atcagcgaca tcgcgctgtt caccatgcac
     4981 agcaacagga agacgatcgc gaacaccggt accggtacct gcgcctcgcc gtgtcgaaca
     5041 cccaggcggg tgaaatacca gccgacgccg agcaccacgg gcagcagcag aaacacccgg
     5101 aacaacttga cgatcacagc tgtatttccg accggctcag acaccgcata gcctgcaccg
     5161 accacctggg cgacgtcgtg tatggtagcg cccagcatca ctccggttgt ctgcgcgtcg
     5221 aagccgatca aaatgcaaag cgagggatat aacagcatcg taagggtcgc cagcgcgttc
     5281 actgcgacga ccacaaaagc aatgtcggct tttttgcctt tgtactcagg cacgacggtc
     5341 gacgtcgcca gcgttgcaga cgcgccgcag accgctgttc cggccccgac cagcgcgcca
     5401 aaacccggcg cctgaccgct ccagcgcgcg aagataaaac ccgaggcgac cgtcgcaacc
     5461 atggcaatga cgataaggat tgcagtctcg gcgccgagcg ccgcgatatc gccgagcccg
     5521 acacgcaatc ccaacagcgc taccgcccaa cgcagcagcg ttttcacgca gaagttcatg
     5581 ccgggctgca cggctgggcc tgccgcgagc ggattgaggg cgatgccgac gaccagcgcg
     5641 atcaccatgc ttgggattgg aataacccgg gcaacgtatg gcgccgcgat ataaccgatg
     5701 gcggcgacga tcgccgacag gataacgccg ggtgccagcg cagtcgccgt ggccatcgac
     5761 ggccgaaagg ctttcatttc ttctgctgac acgcgggctc cttgttattc gctcagggcc
     5821 acggcactgc cggtgcggcg agccttgaga cccgccccca cggcttccgc tatctgcgag
     5881 ggggtgtcga caacggtaac accggcggct tccagcgcct gacgcttcga cgcgtaactt
     5941 ccggcattgc cggtgacgat cgcgccggca tgacccattt tcttgcccgg cggggcggcg
     6001 gcgcctgcga tgaaagcaac catcggcttg gtcattcgct tcgcgtagtc ggcggcgttc
     6061 tcctccatcg cgcccccgat ttctccgacg atcacaacgg agtcggtgcc ggcgtgcctg
     6121 tcgaatgttt cgagggcgtc gcgggtcgtt gtgcccagca tcggatcgcc gccgatgccg
     6181 ataaaggccg actggcccac accggcgcgc gtgaggttga ggcagatcag cgtgccgagg
     6241 ctcccgctgc gcgaaatcac gccgacacgg cccgctttga acacgctggg aacgaaagcg
     6301 ggcatgatgc cggtaaagca ctcacccgga gtcaccaggc ctgcggtgtt ggggccgaca
     6361 atgcgggtgc cgaatgtggc ggcggcaaca tggatctcca tgacatcctg cgcaggaatg
     6421 tgctcggtca gcaccaccag cagcttgatc ccggcctgcg ccgctgaaac ggctgcgtct
     6481 ttcgccatgg gcggcggaat gaacatgacc ccgacctcgc cgccgtgctt ttcaaccgct
     6541 tcgacggtcg acgcacaaat cggtatgccg acatgcgttt cgcctgcgcg cttcggattg
     6601 acacccgcca ccacgttggt gccatacgcg atcatcttct cggtccagaa ggtgccctgc
     6661 ttgccggtga tgccgagcac gacaacgcga tctttcttgc gaacgatcat tgcgcagcct
     6721 tcaccgccgc gcggatggca tcttccatga attcgtaggg ctcgatgccg agtt
//
LOCUS       DATDHO010000242         2812 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_258919, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000242 DATDHO010000000
VERSION     DATDHO010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2812)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2812)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2812
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_258919"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..508
                     /locus_tag="VIY07_04815"
     CDS             <1..508
                     /locus_tag="VIY07_04815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEY6381108.1"
                     /translation="FHDRNDSFVVLIPVVVMAAGQLAGGLAWLSISGEDAPDLVATAP
                     ITSQRILWAKIEAVIGMIALVFAPTVAVLTLDTVFAGIVCGLGILTTAAAATVIQLCF
                     RVQARRSQFRRRQTSSRLATFAEAFSSIAWAATTALVAAQTWAALGTAAIALGILAGV
                     WLISPSRT"
     gene            complement(513..1736)
                     /locus_tag="VIY07_04820"
     CDS             complement(513..1736)
                     /locus_tag="VIY07_04820"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381109.1"
                     /translation="MLQSPPSSIESKESWTVATVALVTMLMAFGAAWITAVALKDIAA
                     EVDGIRSIPALASALAWLGSGFGGILMGRIADKVGTRWTVICGSLMIGLGLAISTIGP
                     SWPLWIGHGLFIGLIGLGGINAPMYIYVSRWFDRRRGSALALISSGSYLAGAMWPPVF
                     ERAIGAFGWRSTMLWYALAEIVVIVPLALLYFRTAPELVLPAASSDPSARKARVLGWP
                     PNLVFGMMCVAAVLCCVPMAMPQGHLVALCSDLGITRSNGALMLSVLLGTAFLSRQIW
                     GAISDRIGGLATVLIGSAWQAASMTAFLFTQNEAGLFTIAAAFGLGFSGIIPAYVLAL
                     RELFPASEASWRIPTLLLFSGGGMALGGWLAGLLYDHFGYYAPAFAAGIGANILNLIF
                     IGILVGRGRLRAAFA"
     gene            2010..>2812
                     /locus_tag="VIY07_04825"
     CDS             2010..>2812
                     /locus_tag="VIY07_04825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HEY6381110.1"
                     /translation="MPFRTVSLDDKYDLSQSHVFVTGYQALIRACLMQKERDRRAGLN
                     TAGYVTGYRGSPLGGLDQQFMRAARQLVAADIKFQSGLNEDLAATALWGSQQAELRGE
                     GKFDGVFGMWYGKGPGVDRTGDVFRHANLAGTSRNGGVIALMGDDHTAESSTTAHQSE
                     FHFVDVMIPILNPAGVQEIVDYAQYGCAMSRFTGAWTALKCMHETVESTGVVDGSLDR
                     MQIVTPTDFTMPPGGLNIRLTDTFLGQEARLHDFKRDAMLAFVRANKLNR"
BASE COUNT          584 a          897 c          845 g          486 t
ORIGIN      
        1 gttccatgac cgcaacgatt cattcgttgt gttgattccg gtggtggtga tggcggccgg
       61 ccaactcgcc ggaggcctcg cgtggctatc gatttcgggc gaggacgcac ccgatctggt
      121 cgccaccgcg ccgattacct cgcagcgcat cctgtgggcc aagattgaag cagtcatcgg
      181 gatgatcgcg ctcgtcttcg cgccgacagt agccgttttg accctcgata ccgtattcgc
      241 cggcattgtt tgcggtctcg gcatattgac cacggcagcc gccgcgacgg tcatccagct
      301 ctgtttccgc gtgcaggcgc ggcgcagtca attccgtcgc aggcagacct catcccgcct
      361 cgccacattc gccgaggcgt tctcctcgat tgcctgggcc gcgacaaccg cgctggtggc
      421 cgcccaaacc tgggccgcgc ttgggacggc ggcaatcgcc ctcggcatcc tggcaggcgt
      481 ctggctgatc agtccgtcgc ggacctgatt tctcaggcga acgccgcccg caagcgccct
      541 cggccgacca gaatcccgat aaagatcaga ttgagaatat tggcgccgat tcccgcggcg
      601 aaggcgggcg cataataacc gaaatgatcg tagagaaggc cggcgagcca gccgccgagc
      661 gccatccccc cgccgctgaa cagaagcaac gtcggaatgc gccacgaggc ctcggacgcg
      721 ggaaacaatt cgcgcaatgc cagcacatag gccgggatga tcccggaaaa tccgaggccg
      781 aacgccgctg ctatcgtgaa caggcctgct tcgttttgcg tgaagagaaa cgccgtcatc
      841 gacgcagcct gccatgccga gccgatcagg accgtcgcga gcccgccgat ccgatcagag
      901 atggcgcccc aaatctgccg gctcagaaag gccgtgccca gcaggaccga cagcatcaac
      961 gcaccgttcg atcgcgtaat gccaagatcg ctgcataagg cgacgagatg accttgcggc
     1021 attgccattg gaacgcagca cagcacggcc gcgacgcaca tcatcccgaa gaccagattg
     1081 ggcggccacc caaggacacg cgctttcctg gcggagggat cggacgaagc ggccggcaaa
     1141 accaattcgg gtgccgtgcg aaaataaagc aaggcaagcg gcacgatcac gacaatttcg
     1201 gccagcgcgt accaaagcat ggtgctgcgc catccaaagg cgccgatggc gcgttcgaac
     1261 acgggcggcc acattgcgcc ggccagatag ctgccgctcg aaatgagtgc caacgccgag
     1321 ccacggcggc gatcgaacca gcggctgaca tagatgtaca tgggcgcgtt gatgccgccc
     1381 aacccgatca gcccgatgaa gagcccgtga ccgatccaaa gcggccagga cgggccaatg
     1441 gtcgagatcg caagaccaag gccgatcatc aaggacccgc agatcacggt ccatcgcgtg
     1501 ccgaccttgt cggcgatcct gcccatcaga atgccgccga aaccggagcc aagccaggcg
     1561 agcgcgctgg cgagcgccgg aatcgaccgg attccgtcga cctctgccgc aatgtccttg
     1621 agcgcaacgg cggtgatcca ggccgctccg aatgccatca gcatcgtgac cagcgcaacc
     1681 gtggcgactg tccaggactc tttgctttcg attgaggaag gcggcgattg caacatcgag
     1741 gggagttccc ggcgggacac ttttttggca gccccggctg cttttgacca cccacatcgc
     1801 cgtagatcag ctctgtctgc tgcattgcgc caaaatgcgc gcaaccgccg gccacggaaa
     1861 tttccttttg caagcggcgg caataacgaa attgacccaa acccgctgag gtgtagcttt
     1921 tccgggcggt tcagcgcttt gccacgcgca ggacaagcct atatgagtgg gaaccggcgc
     1981 cgtggtgcgc cgcgacgaca aggccatcca tgccgtttcg aacggtcagc ctcgacgaca
     2041 aatacgacct gagccagtcg cacgtattcg tcacaggtta tcaggcgctg attcgtgcct
     2101 gcctgatgca gaaggagcgt gaccggcgtg ccggcctgaa taccgccggt tatgtcactg
     2161 gctaccgcgg ttcgccgctc ggcggtctcg accagcaatt catgcgtgca gcaagacaac
     2221 ttgtggctgc cgacatcaag ttccaatccg gcttgaacga agacctcgcc gccaccgcgc
     2281 tgtgggggtc gcaacaagct gagctgcgtg gcgaaggcaa attcgatggc gtgtttggta
     2341 tgtggtacgg caaagggccg ggtgtcgacc gcactggcga cgtgttccgg catgccaatt
     2401 tggccggcac gtccaggaat ggcggagtca ttgccctgat gggcgatgac cacacggccg
     2461 aatcatcaac gactgcgcat caatccgaat tccatttcgt cgatgtgatg attccgattc
     2521 tcaatccggc cggcgtccag gaaattgtcg actacgcgca atacggctgt gccatgtcgc
     2581 gcttcacagg cgcatggacc gcgctcaaat gcatgcacga gaccgtggag tcgaccgggg
     2641 tggtcgatgg ttcgctcgat cgcatgcaga tcgtgacgcc gaccgatttc accatgccgc
     2701 caggtggcct gaacattcgc ctcaccgaca cattcctcgg ccaggaagcg cgcctgcacg
     2761 acttcaagcg cgatgccatg ctggcctttg tgcgagccaa caagctcaat cg
//
LOCUS       DATDHO010000243         1654 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_159699, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000243 DATDHO010000000
VERSION     DATDHO010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_159699"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(368..1618)
                     /locus_tag="VIY07_04830"
     CDS             complement(368..1618)
                     /locus_tag="VIY07_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011493845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HEY6381111.1"
                     /translation="MELLSVIVGHADRCAPLRAYLTALCLAGERKSIEPMAARIDPRH
                     VSSRHQSMHHFVANAEWDDSAVLQLARNTVLDAMERHGAVAGWIVDDTGIPKKGSHSV
                     GVTRQYCGVLGKQDNCQVAVSLTLANEAVSVPAAYRLYLPEAWASDPQRRLTAGIPKD
                     VIFQTKWQIALDMIDNLRAQEWPTAPILADAGYGVVTAFRDALTQRQIPYVVGISKET
                     TVWPPGMEPLPPKRRPRTGRPPSKMRRSRNHQPAPVLKLAQHAPARLWRDVCWREGTR
                     GKMTSRFLWLRIRPAHRDIDLHAPRAVEWFIAEWPRGESEPTKFWLSTMPSDTDIAQL
                     IRLTKLRWRIERDYEELKGSFGLDHYEGRGWRGFHHHSALSIAAYAFAAAERARLSPP
                     EPLSFLRAAPVPRGFKPRGAASAA"
BASE COUNT          343 a          499 c          476 g          336 t
ORIGIN      
        1 cgaacggctc tcgaattgac gcggcagctc tttaagtttg tggctgttgc aaaagtcgcc
       61 gggtttatgt gcggacgggc tatcaagccc gtccctcgag agcttggaga tttgggtgtc
      121 tttgatcgag cttccgagtg ctgctcattc gggccccagg gttgtgagtc ccgaatcctc
      181 gcacaaggca acagccgtcc acgtgcacgt gatcggcttt tttctcacgg cgccggggga
      241 acttagtact actgtgtcat aaaagcagca tcaaccacca cgaccacacc atgtgcaggg
      301 tagatgctgg agcaatgcgc gagagcgaat ccggcacatc gtctcgatcg atgaagacac
      361 atggcgttca ggccgcactg gcagcgcccc gcggcttgaa accacggggt acaggagcgg
      421 cacggaggaa ggagagaggc tcaggggggg aaagccgagc tcgctcggcg gcggcaaagg
      481 catatgccgc tatggataat gcgctgtggt gatggaaccc cctccagcct cgtccctcgt
      541 aatgatccaa gccaaaagat cccttcagtt cctcgtagtc gcgctcgatg cgccagcgca
      601 acttggtcag tcgaatcagc tgtgcgatat ccgtgtcgga cggcatggtc gacaaccaaa
      661 actttgtggg ctccgactcg ccgcgaggcc attcagcaat aaaccattcg accgcgcgag
      721 gcgcatgcag gtcgatatcc cggtgagcgg ggcgaatccg caaccagagg aatcgagagg
      781 tcatcttgcc gcgtgttcct tcgcgccagc agacatcccg ccacagccgc gccggagcgt
      841 gttgggcaag tttcagaact ggcgcaggct gatggttccg actgcgtcgc attttcgatg
      901 gtggacggcc tgttctcggt ctccgcttcg gtggcaacgg ttccatcccc ggtggccaaa
      961 ccgtcgtttc cttacttatt ccgactacgt atggaatctg gcgctgagtc aaggcgtcgc
     1021 ggaaggcggt cacaacgcca tatcctgcgt cagccaaaat cggcgccgtg ggccattctt
     1081 gcgcacgcaa gttatcaatc atgtcgagtg cgatctgcca tttggtctgg aatatgacgt
     1141 ccttcggaat gcctgccgtg aggcgtcgtt ggggatcgct cgcccaggcc tccggcaaat
     1201 aaagccgata cgccgccggt acactcacgg cttcgttggc cagcgtcaga ctgacggcta
     1261 cctggcaatt gtcctgcttc cccagtactc cacagtactg ccgagtgaca cccacagaat
     1321 gggatccctt cttaggaatc ccagtgtcat cgacaatcca gccagcgaca gcaccgtgac
     1381 gttccatcgc atccagcacg gtgtttcgcg ccaattgcag caccgccgaa tcatcccatt
     1441 ccgcgttggc aacgaaatga tgcatcgatt ggtggcgcga gctgacatgc ctcggatcaa
     1501 tccgcgccgc catcggctcg atgctctttc gctcgcccgc gagacacaac gcggtcaggt
     1561 atgctcgaag cggcgcgcaa cgatcggcat gccccacaat cacagacaac agctccagat
     1621 acttctcaaa ccgttgttcg gagggatcag cagt
//
LOCUS       DATDHO010000244         2391 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_308451, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000244 DATDHO010000000
VERSION     DATDHO010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_308451"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..632
                     /locus_tag="VIY07_04835"
     CDS             <1..632
                     /locus_tag="VIY07_04835"
                     /inference="COORDINATES: protein motif:HMM:NF015000.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HEY6381112.1"
                     /translation="YGIETDLQVSADGEAMVHHDDALGRLTDGDGLLADLSAAQIRKV
                     RFKASSAHILTLGELCELVAGRVTLLLELKSRFDGDARLAERTIAVLASYGGPVAVMS
                     YDPDLIAAVRHAAPDLRRGIVSEREYSHPEWDKLSAARKRDMAWLLHAPRSRPQFIAY
                     SVNDLPAAAPLLARTVFGRPLLTWTVRTENNRRVASRWADQIIFEGWTP"
     gene            708..998
                     /locus_tag="VIY07_04840"
     CDS             708..998
                     /locus_tag="VIY07_04840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381113.1"
                     /translation="MKPLLLGAGLAIALGSASLAEPAAPQTMKIEAQELSAATKKSTA
                     ARQRREPGKIACTVAGCHEIPPGCQPQMGYNWDGIPTGFDIVVCRPYRGRRG"
     gene            1055..2305
                     /locus_tag="VIY07_04845"
     CDS             1055..2305
                     /locus_tag="VIY07_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6381114.1"
                     /translation="MNSLEFRIRIIQSLADVSAAAWNSCASESAPTREQAEVKLTSED
                     NRSPKLSTQGQANNPFVTHEFLSSLEESRSVGGRTGWEPRHLLAEDQVGALVGAAPCY
                     VKGHSRGEYVFDHGWADAFERAGGEYYPKLQIAVPFTPVTGPRLLAASGPLEDAVRGA
                     LADAAAEITAANELSSIHLTFLTEREWRLLGRRGFLQRTDRQFHWDNAGYASFDHFLN
                     QLASRKRKTIRRERKEALRAGIEVHWLTGSDLTEAVWDAFFAFYMETGSRKWGRPYLT
                     REFFSIVGHKMRDRILLVMARRAGRWIAGAINFIGCQALYGRNWGAIEHHPFLHFELC
                     YYQAIDYAIANKLERVEAGAQGEHKLARGYLPHATHSAHFIANPGLRRAVADYLSRER
                     LYVQAAAEELAAATPFRKDLVEQE"
BASE COUNT          482 a          724 c          704 g          481 t
ORIGIN      
        1 gttacggcat tgagaccgac ctacaggtga gcgccgacgg cgaagcaatg gtgcatcatg
       61 acgacgccct tggccgcctg acagacggcg acggcttgct tgccgatttg agcgcggccc
      121 aaatcagaaa ggtccgattc aaggccagct ccgcgcacat tcttactctg ggtgaattgt
      181 gtgagctcgt tgcgggtcgc gtcacgttgt tgctggaact caaaagccgt tttgacggcg
      241 atgcgcggct tgccgagcga acgattgccg tgctcgccag ctatggcggc ccggttgcgg
      301 tgatgtcata tgatcctgat ctgattgctg cagttcgcca tgcagcgcca gacttgagac
      361 gcggaattgt cagcgagcgt gagtattcgc atccggagtg ggacaaattg tcggccgccc
      421 gcaagcgcga catggcctgg ctgctgcacg cgccgcgaag ccggcctcaa ttcatcgcct
      481 actcggtcaa tgatctaccg gcggccgcgc ccctgctcgc tcgcacggta ttcgggcgcc
      541 cgctcctaac ctggaccgta cgcaccgaaa ataaccgcag ggtggcctcg cgctgggccg
      601 atcagatcat attcgagggt tggacgccgt aatttctgcc attgcggaac ccgccgcgac
      661 tttgcccgtt ttgcttgcaa aagtaatcca aagccattga gctgaaaatg aaaccgcttt
      721 tgctcggtgc gggtttggcg atcgcgcttg gctcggcgag cctcgcagaa ccggccgccc
      781 cacaaacaat gaaaatcgag gcacaagagc tgtcggccgc caccaagaaa tcgacggctg
      841 cgcgtcagcg ccgcgagccc ggtaaaattg cttgcaccgt cgccggctgt catgaaattc
      901 cgcccggatg ccaacctcaa atgggttaca actgggacgg aatccccacc ggcttcgata
      961 ttgtggtctg caggccctac cgtggccgcc gcggctaaat ccggcatgaa cattgagcga
     1021 cttcaggcgt aaagtcggtt agaagctttg cctgatgaac agtctcgaat ttcgcatccg
     1081 cattattcag tcgctcgcgg acgtttccgc tgcggcatgg aatagctgtg cgtccgaatc
     1141 tgcaccgacc agagaacaag ctgaagttaa actaacatct gaggataacc gatccccgaa
     1201 gttatcaacg caaggacaag ccaataatcc attcgttacg cacgagtttt tatcctcgct
     1261 tgaggaatca agatcggtcg gtgggcgaac gggttgggag ccgcgccatc tgcttgccga
     1321 ggaccaggta ggcgcgctcg tcggcgccgc gccctgctac gtaaagggcc attcgcgcgg
     1381 cgaatatgtg ttcgatcatg gttgggccga tgccttcgag cgagcgggcg gcgaatatta
     1441 tcccaagctt caaatcgcag taccgttcac ccccgtcacc gggcctcgcc tcctggcggc
     1501 atccggccca ctcgaagacg ccgtccgcgg cgcgctcgcc gacgccgccg ccgagataac
     1561 cgccgccaat gagttgtcgt cgatccacct cacatttctg accgaacgcg aatggcggct
     1621 gcttggcagg cgaggctttc tgcaacgcac agaccgccaa tttcactggg acaatgccgg
     1681 ctatgcgagc ttcgaccatt ttctgaatca gctggcctct cgcaaacgca agaccatcag
     1741 gcgcgagcgc aaggaggcct tgagggcagg cattgaggtg cactggctga ccggcagcga
     1801 tctgaccgaa gcagtctggg atgccttctt tgcgttctac atggaaaccg gatcacgcaa
     1861 atggggacgg ccctatctga cacgcgagtt tttttccatc gttggccaca agatgcgcga
     1921 tcgcatcctc cttgtgatgg cgcgccgcgc agggcgttgg attgcaggag ctatcaattt
     1981 cattggttgc caggcgctct atggccggaa ttggggagcg atcgagcacc atccgtttct
     2041 ccatttcgag ctctgctatt atcaggccat cgactacgcg atcgcgaata aactcgagcg
     2101 ggttgaagcc ggcgcccagg gcgagcacaa gctggcgcga ggctacctgc cgcacgccac
     2161 ccattctgcg cattttattg ccaaccccgg cctgcgccgg gcggtcgccg actatctctc
     2221 gcgcgagcgc ctttatgtcc aggccgccgc cgaagagctt gcagcggcga cgccattccg
     2281 caaggatttg gttgaacagg agtgacagcg cagtccctga tcagagggac cgattttcag
     2341 ccacggttgt gcgccaggaa gcttggggag cccgatgccg agctacgatc c
//
LOCUS       DATDHO010000245         1681 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_357554, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000245 DATDHO010000000
VERSION     DATDHO010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357554"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(540..890)
                     /locus_tag="VIY07_04850"
     CDS             complement(540..890)
                     /locus_tag="VIY07_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018251229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3147 family protein"
                     /protein_id="HEY6381115.1"
                     /translation="MLYLTVKAALSGIIIAIVSEVARRSPTLGALIVSLPLVSILGIL
                     WLWHDTGDAERIAAHAQSTFWYVLPTLPMFLLMPAMLRHGIGFWLTLAACCALTFILY
                     LCIIRALEEFAVTL"
     gene            964..1248
                     /locus_tag="VIY07_04855"
     CDS             964..1248
                     /locus_tag="VIY07_04855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381116.1"
                     /translation="MRFAFIAACLVCANAFATGLAQADNPPADKPESSTGRTQTPETK
                     GQKQPQGWTGPTNTGVGGAPASSPQGQTPPGMQPAPEGSSKTTVAPEKGK"
     gene            1360..1668
                     /gene="clpS"
                     /locus_tag="VIY07_04860"
     CDS             1360..1668
                     /gene="clpS"
                     /locus_tag="VIY07_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEY6381117.1"
                     /translation="MSQKTLEKPRTKVKPKTQRPPLWKVILLNDDYTPREFVVQVLKA
                     VFRMNESHAYKVMMTAHQKGACVIAVYTRDVAETKAKEATEMGRAKGYPLYFTTEKEE
                     "
BASE COUNT          400 a          494 c          489 g          298 t
ORIGIN      
        1 tggccttgcg aggtcccttg cgtccgattg gcgagcctcg ccagagccag ctcaaccgtc
       61 ctcgtgctgt ttttgccatc gtttctctcc cagcactaaa gatgccaaga gataatgcat
      121 ggcgcggaac caatgttccg cgccatgatt ttgtctcggc gtctcagcgg ttaagcggcc
      181 gcttcgatgc gcaccgttgt ttcaaacgaa gtcccgcacg catcacactg ccacagatgc
      241 ctcacgcggc atccgtcgag acattccgac cattcgggaa tgtaaatgcg ctcgccgcat
      301 tgcgcgcact cgatcaccgg acgcgagcgc gcgaatcttg cgatatcgcg agacagttcc
      361 attggggtac ctcccgacta ccagagaccc cgtaccctcc gtttttggac tttattggaa
      421 ggacagggtg agtaaagcag tagcgctgac gtaaaggtac atgcagctcg tgaatttttt
      481 gcggcagaat catcacatgc aaaaaatctt tgctttctcg cgagatttgc tgcgttgcgt
      541 cacagggtca cggcgaattc ttcgagcgcg cggataatgc aaaggtagag aatgaaggta
      601 agcgcacaac atgctgcaag cgtcagccaa aatccgatgc cgtgccgcaa catcgccggc
      661 atcagcaaaa acatcggcag cgtcgggagc acataccaga atgtcgattg cgcgtgggcg
      721 gcaatgcgct cggcatcgcc agtgtcgtgc cacaaccaga gaatgccgag gatcgagacc
      781 aacggcagtg acacgataag tgcgccgagg gtcggcgagc ggcgcgccac ttccgaaacg
      841 attgctatga tgatacccga caatgcggcc tttacggtca aatagagcat tggagcggct
      901 cctcaaattg gaactcggcg gcgtcccaga cagttaggct ccaaggtcaa aggagccaac
      961 acgatgcgtt ttgcatttat tgctgcctgc ctggtttgcg ccaacgcttt tgcaaccggc
     1021 ttggcccaag ccgacaatcc tcccgcagac aagccggaat ccagcacagg ccggacccaa
     1081 acgcccgaga cgaagggtca gaaacaaccc cagggctgga ccgggccgac caacactggc
     1141 gttggcggag cgcccgcttc aagccctcag ggtcaaaccc cgcccggtat gcagcccgcg
     1201 ccggaaggct cctcgaagac gaccgtcgcg ccggagaagg gcaaatagcg cgcaaaactt
     1261 aaggctgggc gccgggcagc ggaagctggc tcgatccatg cgcgcacgac ggctatagtc
     1321 ggcacgggat cagagtgcca ctgcaatcgg ggtatcccgg tgagccagaa gacgctcgag
     1381 aagccgcgca cgaaggtcaa gccaaagacg cagcgtccgc cgttgtggaa ggttatcctg
     1441 ctcaacgatg actacactcc gcgcgagttc gtcgtgcagg tactcaaggc cgtattccgg
     1501 atgaacgaaa gccacgccta caaggtgatg atgacagcgc accagaaggg cgcctgcgtc
     1561 atcgcggttt atacccgcga cgtggcggag acgaaggcga aagaagcaac ggaaatgggc
     1621 cgcgccaagg gctatccgct ctatttcacg acagagaagg aagagtagga cgccgatatc
     1681 t
//
LOCUS       DATDHO010000246         1998 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_407893, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000246 DATDHO010000000
VERSION     DATDHO010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407893"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /locus_tag="VIY07_04865"
     CDS             <1..816
                     /locus_tag="VIY07_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY6381118.1"
                     /translation="GGKRLAIYVGLNLEWFSFGEGLGAELAPGGPQPDVLNYAWRDYG
                     NRVGVFRLAALFDELKLPVSLLINSEMYRHAPAAVGAFPNAELVGHGRSNSERQGDLE
                     EKMERLLIEETTAAIEQHSGKRPRGWLGPWISQSPVTPDLLQEAGYRYLLDWCHDDQP
                     VWMKTRRGRILSVPYPQELNDIPQIVARKREGAEFADMIVDAFEVMHDECVRRPLIMG
                     IALHPYIIGWPHRFKHLARALRHISRRADGRVWFTTSGEIADFAERLPAGTVP"
     gene            818..1285
                     /gene="ruvX"
                     /locus_tag="VIY07_04870"
     CDS             818..1285
                     /gene="ruvX"
                     /locus_tag="VIY07_04870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEY6381119.1"
                     /translation="MSVILPLAEAAVHLAARGALIGLDLGTKTIGVAASDPDRKLATA
                     VETIARKTFTADAKRIIGLAAERAAVGIVLGLPINMDGSEGPRAQSTRAFARNLAKLT
                     ELPIALWDERLSTAAVERELIAADVSRKKRAAVIDQHAAAFILQGALDRLARM"
     gene            complement(1453..1743)
                     /locus_tag="VIY07_04875"
     CDS             complement(1453..1743)
                     /locus_tag="VIY07_04875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381120.1"
                     /translation="MDVRRPRSASALVAVAGAVIASSAYNGGYYGYYGDPGYYGYAYA
                     PGYAYDSYAYEPGYAYVAPGYGYYGNSRYGYYDGHNWARQHSTNNFAIESQR"
BASE COUNT          392 a          624 c          597 g          385 t
ORIGIN      
        1 ggcggcaagc gtctcgccat ctatgtcggt ctcaacctgg aatggttctc gttcggagag
       61 ggactggggg ccgagctcgc accaggcggg ccgcagcccg acgtgctcaa ctatgcctgg
      121 cgcgactacg gcaaccgcgt cggggtattt cgcctcgctg ccctgttcga cgagttaaag
      181 ctgccggtct cgttgttgat caactcggaa atgtaccggc atgcgccggc ggcggtcggg
      241 gcatttccca acgcggaact ggtggggcac ggccgcagca attcggagcg ccagggcgat
      301 ctcgaagaaa agatggagcg cctgctgatc gaagagacga ccgcggcgat tgaacaacat
      361 tccggcaagc gtccgcgtgg ctggctcggg ccgtggattt cgcaatcgcc cgtcactccg
      421 gatctgttgc aggaggccgg ctaccgttat ctgctcgact ggtgtcacga cgaccaaccg
      481 gtctggatga aaacgcgccg aggacgcatt ctgtccgtgc cctatcccca ggagctcaac
      541 gacatcccac agatcgtcgc gcgcaaacgg gaaggcgccg aattcgccga catgatcgtc
      601 gatgctttcg aggtcatgca cgatgaatgt gtgcgacgcc cattgatcat gggaattgcg
      661 ctgcatccct acatcatcgg ctggccgcat cgcttcaaac acctggcgcg cgcgctcaga
      721 cacatttccc gccgggccga cggtcgcgtg tggtttacca cgtccggcga gattgcggat
      781 tttgcggaac ggctccccgc aggcacggtg ccgtgacatg tccgtcattc tgccactcgc
      841 cgaggctgct gtgcatctgg ccgctcgcgg cgctctgatc gggctcgatc tgggaaccaa
      901 gacgatcggc gtggcagcca gcgaccccga tcgaaagctt gcaaccgcgg tcgaaaccat
      961 tgcgcgcaag accttcaccg ctgacgcaaa acgcatcatt gggcttgctg ccgagcgcgc
     1021 cgcggttggg atcgtgctcg ggttgccgat caacatggat ggcagcgaag gtccacgagc
     1081 acaatcaact cgcgctttcg cgcgcaatct cgcaaagctc accgaattgc cgatcgcgct
     1141 ttgggatgag cggctctcaa ccgcagcagt cgagcgcgag ctgatcgctg cggatgtcag
     1201 ccgtaaaaaa cgtgcagccg tgatcgatca acacgctgct gctttcattc ttcaaggtgc
     1261 gctcgatcgg ctggcacgaa tgtaagcaaa agagtgatcc ttccttcgat cgtccccgcg
     1321 caaacgggga tccagacatg aatttccccc ggctggattc ccgcttacgc gggagtgaac
     1381 ggggaaatct aagaatgaaa aaagaggccg ctccgaagag cggccccttt tccttcccga
     1441 cttcgtccca gcctaacgct gcgactcaat cgcgaaattg ttggtgctgt gctgacgtgc
     1501 ccagttgtgg ccgtcatagt acccgtacct gctgttgccg tagtaaccgt accccggcgc
     1561 gacgtaggca tagccgggtt cataggcgta tgagtcatac gcgtagcccg gagcgtaggc
     1621 gtagccatag tagcccgggt cgccatagta cccgtagtaa ccaccgttgt aggccgagct
     1681 ggcgatcacc gcgcctgcca ccgcaaccaa cgccgaagcc gatcgcggcc gccttacgtc
     1741 caccgcgtgc ctcgcctggt gacgctgcgg caaccgcgag cgcaccggtc aatgctatcg
     1801 ccgtggcgta ttttgctatc gtcttcatgt ggcctccttt caatgccggc tttgaccatc
     1861 gaacgccaac cccggaacac gcatcgcggt ttcgtcggaa ccgctgcaga acagccctga
     1921 acgttcacga ataagtgggg gaaccgcaat gccaacgtcg tgccgaatgc ggtgaagtcg
     1981 gcttccacaa tcaggttg
//
LOCUS       DATDHO010000247         2237 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_110544, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000247 DATDHO010000000
VERSION     DATDHO010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2237)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2237)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2237
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110544"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(193..1581)
                     /locus_tag="VIY07_04880"
     CDS             complement(193..1581)
                     /locus_tag="VIY07_04880"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY6381121.1"
                     /translation="MEREEYQQVAIAAGALAILIALTSGRLPRWLRVVLVLSLVIMAT
                     GAGFFAYRYFTQPTTLTIATGSLDGDVTRALSAIAARMASTNASVRLKVVDKGTAPEA
                     AKEFADGKADLAVARADHVDLSIARTVLTMTHGVVLIVVPPGSSIESMDDLKGKTVGV
                     VAGETNRQVVAAITSGYALETAKVMFKDLTPTDVPRALQAKQIQALLVVIPISEKYLA
                     MLRDAFPRTAKGSLGIVPIESAGAIEEISPPYKSYELPKGTIRGSPPVPDDDLTTLRV
                     PFFLVANKKLDDDVVTGLTKAMMEARRELASQHPLLAQVMSPDTDKDAYIPIHPGAAA
                     FFDGEEKTFFDRYGDQFFYGSLLLGTFTSILAGVWKFMTKDTVEVGERPSMRIYALVE
                     RINEAKSETELAAVERQFNDILKDGLEKVSAGKVDEGEISAISLACQRLQYLMGQRRV
                     ALNGGNAAVAHA"
     gene            complement(1600..1932)
                     /locus_tag="VIY07_04885"
     CDS             complement(1600..1932)
                     /locus_tag="VIY07_04885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381122.1"
                     /translation="MTRLIILVSAATLSLGVQLQCAMADEVPNYDVRKSCKVDTQAYS
                     TAQTMTGCLADEQNARTTLVSQWTQFGPESRSRCAKMVGDPAGPQSYVELLTCLQMAK
                     DVKSLPKN"
     gene            complement(1946..>2237)
                     /locus_tag="VIY07_04890"
     CDS             complement(1946..>2237)
                     /locus_tag="VIY07_04890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381123.1"
                     /translation="SALAPAGSGEAAIPPVTGIFAVYLKAAKKGKTGPNDNILAEFLW
                     FPLGQLIALQSSRRIAKGGRDVSATSVRRRSRSQKAIRRGHERRLETEFCVW"
BASE COUNT          448 a          684 c          611 g          494 t
ORIGIN      
        1 gcaaccatga ccaacgcgac gatcgcaccg aacgcctcga acatcatgat tccagcggca
       61 tggaacggcg ccacaacaaa cagcatgatg agcagcaaga ccgtcagcac gctgagcagg
      121 ggatcgctgt attccttctg caagtcatcc agccggagtc tgcccatcgt tgtcatcaat
      181 ttcgcttccg ggttaggcgt gtgccaccgc ggcattcccg ccattcagcg ccacgcggcg
      241 ttggcccatc agatactgca gacgctggca ggccaggctg atcgcgctga tttcgccctc
      301 gtcgactttg ccggccgaaa ccttctccaa tccgtcttta agaatgtcat tgaactgccg
      361 ctcgaccgcc gcaagttcgg tctcggactt ggcctcattg attctttcca ccagcgcata
      421 aattcgcatc gaaggccgtt cgcctacctc gacggtatcc ttcgtcatga atttccagac
      481 tcctgccaaa atcgacgtaa aggtcccaag cagcaatgat ccgtagaaaa actgatcgcc
      541 gtatctgtcg aagaacgttt tttcctcgcc gtcaaaaaaa gctgctgcgc ctggatggat
      601 agggatatac gcatccttgt cggtgtccgg cgacatgacc tgtgcgagaa gcgggtgctg
      661 gctggccagt tccctgcgtg cttccatcat cgccttggtc agtcccgtaa cgacgtcatc
      721 gtcaagtttc ttgttggcga cgagaaaaaa cgggacgcgc agggtcgtca ggtcgtcgtc
      781 cggcaccggc ggcgagccgc gaatcgtgcc tttcggcaat tcatagctct tgtacggagg
      841 cgagatttcc tcgattgcgc ccgcagactc gatcggcacg ataccgagcg accctttcgc
      901 ggttcgcggg aatgcgtcgc gaagcatcgc aagatatttt tcggagatcg gaatcaccac
      961 cagcagggcc tgtatttgct tcgcctgaag cgcccgcggc acgtcagtcg gggtgagatc
     1021 cttgaacatt accttggccg tctcgagggc atatccactc gtaatggccg caacaacctg
     1081 gcggttggtc tcgccggcaa ccacgcccac cgtctttccc ttgagatcgt ccatgctttc
     1141 tatggagctc ccggggggca ccacgataag cacgacccca tgcgtcatgg tcagcacggt
     1201 gcgagcgatc gacagatcga catgatcagc gcgggcaacc gcaagatcgg ctttgccgtc
     1261 ggcaaactcc ttcgcggctt ccggtgccgt gcccttgtct acaaccttga gccggacgga
     1321 cgcgttcgtg gaagccattc gcgcagctat tgccgacagt gcacgggtta cgtcgccgtc
     1381 aagcgagccc gtcgcgatcg tcaaggtggt tggctgcgtg aaataccgat acgcgaaaaa
     1441 tccggcgccg gtcgccataa tgaccaggct gagaacaagc acgacgcgaa gccatcgcgg
     1501 taatcgcccc gatgtcagcg cgatgaggat cgcgagcgca cccgctgcga tcgcaacctg
     1561 ctgatactct tcgcgctcca ttgagcctgg ccgtttcgat cagtttttgg gcaggctttt
     1621 cacatccttt gccatctgca ggcaagtcag cagctctacg tagctttgcg gaccggcagg
     1681 atcgccgacc attttcgcgc acctcgaccg gctctcgggc ccaaactgcg tccactggct
     1741 gacgagtgtt gtccgcgcgt tttgttcgtc cgcgaggcag cctgtcatgg tttgtgcggt
     1801 cgaataggcc tgcgtgtcga ccttgcagct tttgcggaca tcgtagttcg gcacttcgtc
     1861 ggccattgcg cattgcagct gaacgccgag cgacagcgtt gcagccgaaa ccagtattat
     1921 gagtcttgtc attttcggtc tcccatcacc aaacgcaaaa ttcggtttcc agtcgtcgtt
     1981 catgcccacg acgaatggcc ttctgggagc gagatctccg tcgaactgac gtggcagata
     2041 catccctgcc cccctttgcg atccttcgac tgctttggag ggcaatcaat tggcctaaag
     2101 ggaaccatag gaattcagcc aaaatgttgt cattcgggcc ggttttcccc tttttggcgg
     2161 ccttcaaata aactgcaaaa atgcctgtga ctggcgggat agctgcttcc cccgaaccgg
     2221 caggcgccag tgctgac
//
LOCUS       DATDHO010000248         4834 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_407923, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000248 DATDHO010000000
VERSION     DATDHO010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4834
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_407923"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            185..1921
                     /locus_tag="VIY07_04895"
     CDS             185..1921
                     /locus_tag="VIY07_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEY6381124.1"
                     /translation="MQASNKRNESRWHRALRSLLYGHNVDRNVKAKARLGLAVVAFVA
                     IFSVIAIRLVMFATVNEGHGGRRSIAQDAVATARPDIVDRSGEILATDVKTPSLFAEP
                     RKIIDVDEAVELLTAVLPDLDANEVRERLSSKRGFVWLKREITPSQQVEIHRLGIPGV
                     GFLTENKRVYPSGPVISHEIGHVNIDNQGIAGIEKWLDGQGLAALHMAGLATDQLQRP
                     VKLAVDLRVQYALRDELLIAREKYKAKASAAVVADVNTGEITAMVSQPDFDPNNPREA
                     NDPNRLNRLTTGVYEMGSTFKALTVGMALDSGRISLSSSFDARLPLRYGKFEINDFHA
                     QRRVLSVPEIFTYSSNIGTARMALSLGVDYHQAFLKKLGQLDRLRTELPESAEPLVPK
                     RWAELNTVTIAFGHGLSVAPLQAVMGISALVNGGNLIPPTFLKRDQAEAEKIAKRVIK
                     TETSDKMRYLMRLNVEKGTATRANVPGYYVGGKTGTSEKVVGGRYSKTKVLTSFTAIL
                     PADKPRYLLLIMLDEPQGLPETHGFSTSGWNAVPVGARVIERIAPLLGIPPRFDLPKA
                     DQMLLVSAKETR"
     gene            1918..3366
                     /locus_tag="VIY07_04900"
     CDS             1918..3366
                     /locus_tag="VIY07_04900"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEY6381125.1"
                     /translation="MKLRDLLPEAATDARLGAIEVAGVTADSRKVKPGFLFVAIAGAK
                     ADGAQFAKQAAAAGAVAVAAEQRPDTLPDAAAFVAVKNARRALALAAARFLPRQPRTI
                     AAVTGTSGKTSVAAFTRQIWSTIGYRAASIGTIGVVSPKGEQYGSLTTPDPVELHRTL
                     DQLANEGVTHLAIEASSHGLDQHRLDGVRIAAGAFTNLSRDHLDYHPTIEAYLQAKLR
                     LFEDLIAQDGTAVIGVDECYAGQAIEAAKKRGLKIMTVGETGADIKFAGRSIDGFAQI
                     VTVQHAGRAYKVKLPLVGAFQVQNAGIAAGLALATGAEPGPVFAALEKLVGAKGRLEL
                     TGTYNGAPIFIDYAHKPDALKKTLESLRPYARGKLVVVFGAGGDRDKGKRPIMGRIAA
                     ENADLVIVTDDNPRTENPGAIRAAILAGAKGATEIGDRAEAIRTAVAGLTTGDVLLIA
                     GKGHEPGQIIGDRILPFSDHEAVASALQGKVA"
     gene            3363..4799
                     /locus_tag="VIY07_04905"
     CDS             3363..4799
                     /locus_tag="VIY07_04905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
                     6-diaminopimelate--D-alanyl-D-alanine ligase"
                     /protein_id="HEY6381126.1"
                     /translation="MSALWTLDAMSTAMRAERVGALPAELSGISIDSRTLARGDAFFA
                     VQGENRDGHDFVENALKAGAGLAVVARGHQARFGQAPLLVVPDVLEGLRDLARVARAR
                     TSAKVIAVTGSVGKTGTKDALRLALSAEGETHSSIASYNNHWGVPLSLARCPVGAKYA
                     VFEIGMNHAGEITPLTTLVRPHVAIITSIEPVHLEYFGSLEKIADAKAEVFAGIEPGG
                     AVLLNRDNSQFDRLAASARAVHVERIVSFGAHEEADARLLRVSLQADSSTVEARVLGQ
                     VVTYKLGAPGRHLALNSLAVLAAAFLAGADLALAALALKNLKPASGRGARTILTVPGG
                     NVLLIDESYNANPASMRAAIALLGQATIGTRGRRIAVLGDMLELGPAGVGLHRALVDA
                     IEEGGIDVVFCSGPLMHALWEALPSRVRGGYAETAAALEAEVLKAIRAGDAIMVKGSL
                     GSKMGPIVKALERQFPRRAALDQAPAQG"
BASE COUNT          958 a         1444 c         1515 g          917 t
ORIGIN      
        1 gaatccaagg cctggccgac aggcaccttg gcttgcaacc gatcaaagcg acgcagttcg
       61 ataagttcga tcgcttgccc gaccgcccgc ccacgcctgt cccgacgccc ggtgatccga
      121 ttggggccat gctgtcgccg attctcgacg cgactggcag cgtgtcgcca aggcggtgac
      181 gtccatgcag gcatcgaaca aacgaaacga aagccgctgg caccgcgcgc tgcgctcgct
      241 gctctatggg cataatgttg accgcaacgt gaaagcgaag gcgcgactcg gacttgctgt
      301 cgtcgccttc gtggccattt tttcggtgat tgcaatacgg ctggtgatgt tcgcaaccgt
      361 caatgaagga catggcggcc ggcgaagcat cgcgcaggac gcggtggcca ccgcgcgtcc
      421 agacattgtc gaccgcagtg gcgaaatact cgcgacagac gtaaagactc cgtcgctctt
      481 cgccgaaccg cgcaaaatca ttgatgttga cgaggcagtc gaattgctga ctgccgtgct
      541 ccccgatctg gatgccaacg aagtccgcga gcgtctgtca tccaagcgag gcttcgtctg
      601 gctaaagcgg gagatcaccc caagccagca ggtcgaaatt caccggcttg ggattcccgg
      661 cgttggcttc ctgaccgaga acaagcgcgt ctatccgagc gggccggtga tctcgcacga
      721 aatcggacac gtgaacatcg acaaccaggg tatcgctgga atcgaaaagt ggttggacgg
      781 acaaggtctg gccgcgttgc atatggcggg cctagccacc gatcagctgc agcggccggt
      841 caaacttgcg gtcgacttgc gcgttcaata tgcgctgagg gacgagctgc tgattgcacg
      901 cgagaagtac aaagcaaagg cttcggcagc cgtggttgcc gacgtgaata ccggcgagat
      961 cactgcaatg gtctcgcagc cggatttcga tcccaacaat ccccgcgaag ccaatgaccc
     1021 gaatcgtctc aaccggctga cgaccggcgt ttatgaaatg ggctcaactt tcaaagcgct
     1081 gacagttgga atggcgctcg acagcggtcg catctcgcta tcgtcttcct tcgacgcgcg
     1141 tctgccgctg cgttacggca aattcgaaat caacgacttt cacgcacaaa gacgcgtgct
     1201 gtccgtaccg gagatcttca cctattcgtc caacatcggc acggcccgca tggcgctctc
     1261 gctcggcgtc gactatcacc aggcgttcct caagaagctc ggtcagctcg atcgtttgcg
     1321 caccgaattg ccggaaagcg ccgagccgct cgttcccaaa cgctgggcag agctcaatac
     1381 tgtgaccatt gcattcgggc acgggctgtc ggtcgcgccc ctgcaggcgg tgatgggaat
     1441 ttccgcactg gtcaatggcg gcaacctgat cccgccgact tttctcaagc gcgaccaggc
     1501 cgaggccgag aagatcgcca aacgcgtcat caagaccgaa acctcggaca agatgcgcta
     1561 cttgatgcgc ctcaatgtgg aaaaaggcac ggcgacgcga gccaatgttc cgggctatta
     1621 tgtgggtgga aaaaccggca cttcggaaaa ggtggtgggc ggccgttatt ccaagaccaa
     1681 agtcttgacc agtttcactg ccatattgcc ggccgacaag ccgcgctatt tgttgttgat
     1741 catgcttgac gaaccgcagg gtctgcctga gacccatggc ttcagcacct ccggctggaa
     1801 cgctgtgcct gttggcgctc gcgtgatcga gagaatcgcc ccgctgctgg ggattccgcc
     1861 gcggttcgat ctgccaaaag ccgatcaaat gttgctggtg agcgcgaagg aaacgcggtg
     1921 aagctgcgcg atctcctgcc cgaggcggcg accgacgcgc ggctgggtgc aatcgaggtc
     1981 gcaggcgtca ctgccgacag ccgcaaggtc aaaccgggct tcttgtttgt cgctatcgcg
     2041 ggcgccaagg ccgatggcgc acaattcgca aaacaagcag ccgcggccgg cgcggtcgcg
     2101 gtagcggccg agcaacggcc cgacactttg ccggatgcgg cggcatttgt tgcagtgaaa
     2161 aacgcacggc gcgccctagc gctcgctgcg gcgagatttt tgccgcggca gcctagaacg
     2221 atcgcggcgg tgaccggtac cagcgggaag acatcggtcg ccgctttcac ccggcaaata
     2281 tggagcacga tcggttatcg ggcggcgagc atcggcacaa tcggcgtggt ttcgccgaaa
     2341 ggcgaacagt atggttcctt gacaacgccg gatccggtgg aactgcaccg gacgctcgat
     2401 caactggcaa acgagggcgt cacgcacctg gcgatcgagg cgtcctcgca tgggctcgat
     2461 cagcaccggc tcgatggcgt tcgcatcgcg gccggcgcgt ttacaaatct gtcgcgcgat
     2521 catctggatt atcatccgac gatcgaggct tacctgcagg ccaagcttcg gctttttgaa
     2581 gacttgattg cccaggatgg cacagctgta atcggcgtcg acgagtgcta cgcgggtcag
     2641 gctatcgaag cagcgaagaa acgcggcctg aagataatga ccgtcggcga aaccggcgca
     2701 gacataaagt tcgccggcag atcaattgat ggcttcgccc aaattgtcac cgttcaacat
     2761 gccggacgcg catataaggt gaaattgccg ctcgttggcg cttttcaggt gcagaatgcc
     2821 ggaattgccg caggactcgc tctggcgacc ggtgccgagc caggacccgt ttttgcggcg
     2881 ttggaaaagc tggtcggcgc aaaaggcagg ctcgaactta cggggactta caacggcgcg
     2941 cctattttca tcgactacgc gcacaagccg gatgcgctga aaaagacgct ggaaagcctg
     3001 cgcccctatg cacgcggaaa gcttgtcgtg gtgtttggcg cgggcggcga ccgtgacaag
     3061 ggaaagcgtc cgattatggg ccggatcgcc gccgagaatg cggacctggt tatcgtgacg
     3121 gatgacaatc cacgtactga aaatcctggt gcgatccggg ctgctatcct tgccggcgca
     3181 aaaggcgcaa cggaaatcgg tgatcgtgcc gaggcgattc gaaccgccgt cgcaggactc
     3241 accaccggtg acgtcctgtt gatcgcggga aaaggtcatg agccgggaca gatcataggc
     3301 gatcgcattc tgcctttttc ggatcacgag gcggtcgcgt ctgcgctgca gggcaaagtg
     3361 gcatgagcgc gctctggact cttgatgcga tgagcaccgc gatgcgtgcc gagcgcgtcg
     3421 gcgctttgcc ggccgagttg tcaggcattt ccatcgacag ccgtacgctg gccaggggcg
     3481 atgcgttctt cgccgttcag ggagaaaatc gcgacggcca cgatttcgtc gagaatgcgc
     3541 tgaaggcggg agccggtctc gcggtagttg cgcgcggcca ccaggcgcgt ttcgggcaag
     3601 caccgttgtt ggtggtcccc gacgtgcttg aagggttgcg cgatctcgcg cgtgtcgcgc
     3661 gtgcgcgcac gagtgcgaaa gtcatcgcgg tgaccggctc ggtcgggaag accggaacca
     3721 aggacgcttt gcggctggcc ctgtcggccg aaggcgagac tcattcttcc atcgcgtctt
     3781 acaacaatca ttggggcgtg ccgctatccc ttgcgcgctg tccggtcggc gctaaatacg
     3841 ccgtgttcga gatcggcatg aaccacgcgg gcgagatcac gccgcttacc actctcgtcc
     3901 gtccccacgt tgcaattatt acgagcattg aaccggtgca cctcgaatat ttcggctcgc
     3961 tggaaaagat cgccgatgcc aaagccgagg tcttcgcggg catcgagccc ggcggggccg
     4021 tcctcctcaa tcgggacaac tcccagtttg accggctcgc agcctccgcc agagcggtgc
     4081 atgtcgaacg catcgtatcc ttcggcgcac acgaggaagc ggacgcccga ttgcttcgcg
     4141 tttcgctgca agccgattcc tcgaccgtgg aagcgcgcgt attggggcag gtcgttacct
     4201 acaagctggg cgcgccggga cggcacctag cgcttaactc gctcgctgtc cttgctgccg
     4261 ccttccttgc gggagccgac ctcgcactgg ctgcgcttgc cctcaaaaac ctcaaacctg
     4321 ccagtggccg cggcgcgcgc actatcctta cggttccggg cggaaacgtg ctgctcatcg
     4381 atgaaagcta taacgccaac cctgcatcga tgcgggccgc catcgcgctg cttggtcagg
     4441 caacgatcgg cacgcggggc cgccgcattg cggtgcttgg ggacatgctc gagctggggc
     4501 ctgcaggtgt cggattgcat cgggcgctcg tcgatgcaat cgaggagggg gggatagacg
     4561 tcgttttttg ttccggaccc ctgatgcacg cgttatggga ggctcttccc tcgcgcgtcc
     4621 ggggcggcta tgccgagacc gcggcggccc tggaggctga agtgctgaaa gccatccggg
     4681 ccggcgacgc aatcatggtg aaaggctcgc ttggctcgaa aatgggcccg atcgtcaagg
     4741 cgttggaacg acaatttccg cggcgggccg cgctcgatca ggcccctgca caggggtgat
     4801 attcagggtt agacccaatg ttctactggc tgac
//
LOCUS       DATDHO010000249         2014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_408137, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000249 DATDHO010000000
VERSION     DATDHO010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408137"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..576)
                     /locus_tag="VIY07_04910"
     CDS             complement(<1..576)
                     /locus_tag="VIY07_04910"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666912.1"
                     /note="Catalyzes the first step in hexosamine metabolism,
                     converting fructose-6P into glucosamine-6P using glutamine
                     as a nitrogen source; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEY6381127.1"
                     /translation="MCGIVGILGAKPVAGQLVDALKRLEYRGYDSAGVATLDQGVLGR
                     RRAEGKLRALETRLEREPLGGTIGIGHTRWATHGRPTEDNAHPHATEAVAVVHNGIIE
                     NFRELREQLTRRGRKFVSDTDTEAVAHLVSEEMKNGKSPADAVAAALKQLRGAFALAF
                     LFTGKDDLLIGARKGSPLAIGYGNGEMYLGSD"
     gene            complement(696..2012)
                     /gene="glmU"
                     /locus_tag="VIY07_04915"
     CDS             complement(696..2012)
                     /gene="glmU"
                     /locus_tag="VIY07_04915"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEY6381128.1"
                     /translation="MRSHVPKVLHELGGRSLLGHVLVAARTGGIDELAVVVGPDHDAV
                     SAEARRYAPNAQLFEQRERSGTAHAVLMARKAIDVGVDEVLVMFGDTPLVRAETLLNL
                     RAALADGADVAVLGFKPADPGGYGRLVMHGRELIAIREERDATAEERKIALCNGGLMA
                     IAGKHALAILSRIGNANAKGEYYLTDSVGVARDMGLKTVAIETSEDDVRGINTKVQLA
                     EAEAILQQRLRMAALEAGVTMIAPESVYLSADTKFGKDVTIEPNVVFGPGVTVDDGAT
                     ICSFSHLQGAHVGKGARVGPFARLRRGADLGEDVHIGNFVEVKEAKIEAGAKANHLSY
                     IGDARIGEGANIGAGTITCNYDGVGKHRTDIGKGAFIGSHSALVAPVKVGDGAYIGTG
                     TVVTKDVPAGALAIARAKQAIKEGWAKRLRQVKALGKNLSGKKPKK"
BASE COUNT          371 a          665 c          556 g          422 t
ORIGIN      
        1 gtctgaaccc aaatacattt cgccgttgcc ataaccaatg gccaagggcg aacccttgcg
       61 tgctccgatc agaaggtcgt ctttgccggt aaacagaaaa gccagagcaa aggcaccgcg
      121 caattgcttg agcgcggcgg cgaccgcgtc ggctggcgat tttccgttct tcatttcctc
      181 ggaaacgaga tgcgccacgg cctcagtgtc ggtatcgctg acgaatttcc tgccgcgcct
      241 ggtcagttgc tcgcgcagtt cgcgaaaatt ttcgatgatg ccattgtgaa caaccgccac
      301 ggcttcagtc gcatgcgggt gggcattatc ttcggtcggc cggccgtgcg tcgcccagcg
      361 cgtgtgaccg atgccgatcg tcccgcccag cggctcgcgc tccagacgcg tttcaagcgc
      421 gcgcaatttg ccttcggcgc gccgccgccc gaggacaccc tggtcgagcg tcgcgacccc
      481 cgcggaatca tagccgcggt attcgagccg cttgagcgca tcaaccagtt gcccggcaac
      541 cggcttggct cccagaattc cgactattcc gcacatccgt tgggatagcc cctttgcccg
      601 tggttatggt ttagcggtcc gagacaagtg cttggaaatc aaacgcattg cggcgtgtga
      661 cagcggttcc ctttgcgcac ctgcgattgg ccaattcact tcttgggctt ctttccggac
      721 aggttcttgc ccaacgcctt cacctgccgc aagcgctttg cccaaccttc cttaatcgcc
      781 tgtttggcgc gagcaattgc aagcgctcca gcgggaacat ctttggtcac caccgttccg
      841 gtcccgatat aagcgccatc gccgaccttg accggtgcca ccagtgcgga atgcgatcca
      901 atgaacgcgc ctttgccaat atcggtgcga tgcttgccaa cgccgtcata attgcaggtg
      961 atggtgccgg cgccgatatt ggcgccctcc ccgatccgcg catcgccgat ataggaaaga
     1021 tgattggcct ttgctccggc ctcgatcttg gcctccttca cctcgacgaa atttccaata
     1081 tggacgtcct ctccaaggtc tgcgccgcgg cgcaggcgcg cgaacgggcc tacccgcgca
     1141 cccttaccta catgcgcgcc ttggaggtgc gaaaatgagc agatcgttgc gccgtcgtcg
     1201 acggtgacgc ccggaccgaa gaccacgttc ggctcgatcg tcacatcctt tccaaatttg
     1261 gtgtcagccg acaaatatac gctttccggt gcaatcatcg tgacgccagc ttcaagcgca
     1321 gccatgcgca gccgttgctg caggatggct tcggcttcgg cgagttgcac tttggtgttg
     1381 atgccgcgca cgtcatcctc cgaggtttca atcgccactg ttttcagacc catatcgcgg
     1441 gcaacgccaa cggaatcggt cagatagtat tcccctttgg cgttcgcatt gccgatgcgt
     1501 gacaaaatgg cgagagcgtg tttgccggca atcgccataa gtcccccgtt gcacagcgcg
     1561 atcttccgct cttcggccgt cgcgtcgcgc tcctcgcgga tggcaatgag ctctcggccg
     1621 tgcatcacaa gccgtccgta gcctcccgga tccgccggct tgaatccaag cacggcaacg
     1681 tcagccccat ctgcgagagc cgctcgcagg ttcaacagcg tttcagcgcg tacgagtgga
     1741 gtgtcgccga acatcaccag aacttcatcg acgcctacgt cgatggcctt gcgcgccatg
     1801 agtacggcat gcgcggttcc agaccgctcg cgctgctcga agagctgcgc attgggcgcg
     1861 tagcggcgcg cctctgccga gaccgcatca tgatccggtc ccaccacaac tgccaactcg
     1921 tcgattccac cggtgcgcgc cgcaaccagt acgtgaccga gcaacgagcg gccacccaac
     1981 tcatgcagga cctttggcac atgcgatcgc atgc
//
LOCUS       DATDHO010000250         5091 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_455685, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000250 DATDHO010000000
VERSION     DATDHO010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5091
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455685"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..730
                     /locus_tag="VIY07_04920"
     CDS             <1..730
                     /locus_tag="VIY07_04920"
                     /inference="COORDINATES: protein motif:HMM:NF021606.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2339 domain-containing protein"
                     /protein_id="HEY6381129.1"
                     /translation="NNGDVFRQATALAELAMQVSVGLAMTIGLERLRLRTNSVIHNGA
                     ALLIFALTVVAIVFGLMLALNPLLTGRPVGGAFFNLILLGYGIPALLAAILAVLARTS
                     RPLAYRAVAATVAVGLALIYLGLEIRTLYHGAVLTRGVTTDAEQYTYSAVWLIFGVLL
                     LMAGFVLRSQPARLASAAVIALTIGKVFLVDMADLTGIFRALSFIGLGVVLVGIGWLY
                     QRMLFPASGNGITSVAIGTRSGNG"
     gene            723..1205
                     /locus_tag="VIY07_04925"
     CDS             723..1205
                     /locus_tag="VIY07_04925"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEY6381130.1"
                     /translation="MDKRARSYGVVTPDVLKSYDGLGFLKGIVNGKIPNPPISELLGF
                     HLIEVEEGRAVFEGIPEFRHYNPIGTVHAGFAATLLDSALGCAIFSTIRKGDTWTTLE
                     LKLNLVRSISKDTGPVRAEGRIVHRGRTVATSEGDLKDRAGKLYAHATTTCMIFPANG
                     "
     gene            complement(1208..1672)
                     /locus_tag="VIY07_04930"
     CDS             complement(1208..1672)
                     /locus_tag="VIY07_04930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381131.1"
                     /translation="MLRGIALTAGLLAAVPAVAGEMSADDARQFVIGKTFSYTCFEGT
                     RGQGRVNSDGSVAGTIQVQGSGPVRYAHLPANTLQLRGASVCATLRGMMFQPCFNLQR
                     TSDNSFRGAISGLGFMYCEFTRHGRTTVAHSIRKSRSAQPLGLRSSLAADNN"
     gene            complement(1773..2759)
                     /locus_tag="VIY07_04935"
     CDS             complement(1773..2759)
                     /locus_tag="VIY07_04935"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family oxidoreductase"
                     /protein_id="HEY6381132.1"
                     /translation="MAKFNAVVIEKTDGGTKAALTDFDEANLMDGDVTVRVEYSTLNY
                     KDGLAITGKGPVVRRFPMIAGIDFAGTVESSTHSIWKPGDKVVLNGWGCGETHLGAYA
                     EKTRVKGDWLVPLPKSMSAREAMAIGTAGFTAMLAVMALERHGLSPARGPIAVTGAAG
                     GVGSVAIALLAKLGFAVHAVTGRPQEADFLKGLGAAEIVERKELTGPARPLAKERWAG
                     AIDAVGSTTLANLLSMIRYGGAVAACGLAGGMDLPASVAPFILRGVCLYGIDSVLCPL
                     DRRREAWKRLESDLDRQKLAMITREIHLPDVFGVAPEILAGQVRGRIVVKIG"
     gene            complement(2883..4124)
                     /locus_tag="VIY07_04940"
     CDS             complement(2883..4124)
                     /locus_tag="VIY07_04940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381133.1"
                     /translation="MHATTERPASIGWRTPAVVVACGCLIAMISFGPRSSLGFFLTPL
                     SETNHWGRDVFALAVAIQNLLWGIGQPFAGGIADRFGTNRVLCVGAALYALGLVIMAH
                     SSTPEMLHLSAGVLIGLGLSGCSFNIVLGAFGKLLPEKWRSIAFGAGTAAGSFGQFLY
                     SPIAVALMDKFGWQETLLIFGGVTLLILPFSLALATPATAAGPSVATTPTQSARQAFA
                     EAFGHRSYILLVLGFFTCGFQLAFITVHLPAYLIDRGMSAEIGGWTLAVIGIFNIIGS
                     LCSGWLSNRMPKRFLLSSIYFIRAVAIVAFITLPASPIATLVFGAVTGLMWLSTVPPT
                     SALVAVMFGTRWLAMLFGFAFFSHQVGGFLGVLIGGVAFERTGSYDLVWWLSVLFGVL
                     SAVINLPIVEKPVARPAMAPA"
     gene            complement(4233..>5091)
                     /locus_tag="VIY07_04945"
     CDS             complement(4233..>5091)
                     /locus_tag="VIY07_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cell wall hydrolase"
                     /protein_id="HEY6381134.1"
                     /translation="DLPPADLTPAAPPKAGKDATQLYFGIDPMAAGREAIAPWAPGEA
                     PVVLALRGDPDIKQSALRSSPESADNAGESIANKGEVTGIDQRPRSPAERLALTGVAR
                     AKAEKCLVNAVYFESRGESVRGQIAVAQVVMNRVFSPFYPNDVCGVVYQNAHRHNACQ
                     FTFACDGIPDVVTEPDAWERAKRIARDMLDGKLWMPEVSKSTHYHAYWVRPDWVGEMK
                     KVYKLGVHTFYRPRAWGDGDDEPTWGDAATTERQAAAEEAKGPVSHSAEWLKSEQGQA
                     STRQKNARK"
BASE COUNT         1034 a         1586 c         1537 g          934 t
ORIGIN      
        1 gaacaacggc gatgtattcc gccaagcgac cgcattggcg gaacttgcga tgcaagtttc
       61 cgtcggcctc gccatgacga tcggacttga gcggctgcgc ctgcgcacca acagcgtcat
      121 acacaatggc gccgcgctcc tgatctttgc gctgaccgtc gtggcgatcg tgttcggatt
      181 gatgctggcg ctaaatccgt tgcttaccgg ccgacccgtc ggcggcgcat tctttaacct
      241 gatcctgctc ggttatggca tccccgcact gctggcagcg atcctcgcgg tgctcgcgcg
      301 caccagcagg ccacttgcat atcgcgccgt cgcggcgacg gtggcggtag ggttggcgct
      361 gatctatctc ggtctcgaaa ttcgcacgct ctatcacggc gcggtcctga cccgtggcgt
      421 aacgaccgac gccgagcagt acacgtactc ggcggtatgg ctcatctttg gagtgctgtt
      481 attgatggct ggtttcgtgc tccgatcgca gccggcgcgg ctcgcctccg ctgcagtcat
      541 agcgctgacc atcggcaagg tattcctcgt cgacatggca gacctgaccg gcattttccg
      601 tgcgctttcc ttcatcgggc tcggcgtcgt cctggtcggt atcggctggc tctaccaacg
      661 catgctgttc cctgcgtccg ggaacggtat aacctcggtc gcaattggca cgaggagcgg
      721 caatggataa gcgtgcacgg agttacggtg tcgtcacacc ggacgtactc aaatcatatg
      781 acggccttgg attcctgaaa gggatcgtca acgggaagat tcccaatccg ccgatcagcg
      841 aactgctcgg ctttcacctg atcgaggtcg aggaaggccg cgcggtcttc gagggcatac
      901 cggaattccg tcactacaat cccattggca ccgtgcatgc cggcttcgcg gccacgctgc
      961 tcgattccgc gctcgggtgc gcgatatttt ccacgatcag aaaaggcgat acctggacca
     1021 ccctcgagct gaaactcaac ctggtgcgct cgatcagcaa ggacactggc ccggtgcggg
     1081 ccgaaggccg catcgtgcac aggggacgaa cggttgcgac gtccgagggc gaccttaagg
     1141 atcgtgcagg caagctttat gcgcacgcca ccacgacgtg catgatcttc ccggcgaacg
     1201 gatgaaatca gttgttgtcg gctgcgagcg atgagcgcaa cccgagcggt tgcgcgcttc
     1261 gcgacttgcg aatgctgtgc gcgaccgtcg ttcgcccatg ccgggtgaat tcgcaataca
     1321 tgaaaccgag acccgagatc gcgccgcgga aactgttgtc gctcgtgcgc tgaaggttga
     1381 aacagggctg aaacatcatg ccgcgcagcg tggcacaaac agacgcgcct ctgagctgca
     1441 gcgtgttggc cgggagatgc gcatagcgca cggggccgga tccctgaacc tgaatcgtcc
     1501 cggcaacaga gccatcggaa ttgacgcggc cctgccctcg agtgccttca aagcacgtgt
     1561 agctgaatgt cttgccgatg acgaactggc gagcgtcgtc ggcgctcatc tcgccggcaa
     1621 ccgccggtac cgcggccagc aagccggccg tcaatgcaat gccacgcaac attccccgta
     1681 ctcccgctca cgcaacagct tactgtacat tcagtcgatt ttttaacgct aacagattat
     1741 gcacgacttt cgtcgacaaa tcctgaacgc atttacccga ttttgaccac gatccggccc
     1801 cgcacctgtc cggccaatat ctccggcgcg acgccaaata cgtcgggaag gtgtatttcc
     1861 cgggttatca tggccagttt ttggcggtcc aggtcgcttt ccaggcgctt ccacgcttca
     1921 cggcggcggt ccagtgggca caagacggaa tcgatgccgt aaagacacac gccacgaaga
     1981 atgaacggag cgaccgaggc cggcaggtcc ataccgccgg cgagaccgca ggcggctaca
     2041 gctccgccat agcggatcat cgataagagg ttcgcaagcg tcgtggatcc cacggcgtcg
     2101 atagcgccag cccagcgctc ctttgccagc ggtctggcgg gtccggttag ttccttgcgt
     2161 tccacgattt cggccgcacc cagtcctttc aggaaatccg cttcctgcgg acggccggtc
     2221 accgcatgaa ccgcgaagcc aagcttggcg aggagcgcga tcgcaaccga gcccacgccg
     2281 ccagccgcgc ccgttacagc gatcgggccg cgtgcggggc taaggccatg ccgctcaagc
     2341 gccatgacag ccagcatggc ggtgaaacca gcggtgccga ttgccatggc ctcgcgagcg
     2401 ctcatgctct tgggaagggg caccagccag tcacctttga cccgcgtttt ctcggcatag
     2461 gcgccaagat gagtctcgcc gcaaccccag ccgttgagga caaccttgtc gcccggcttc
     2521 cagattgaat gggtcgacga ttccaccgta ccggcaaagt caatgccggc gatcatcgga
     2581 aagcgacgca ccaccggccc cttgccggta atggccaagc catccttgta attgagggtg
     2641 gagtactcga cgcggacggt cacatcgccg tccatcagat tggcttcgtc gaaatcggta
     2701 agcgccgcct tggtgccgcc gtccgtcttc tcgatcacaa ccgcgttgaa tttagccacg
     2761 ccacgcaact cctcgtcaca tcgctccgat gacgatctac gccgtccttg atggcatagt
     2821 tctaaagacg tgtatgcccg ggacaagccc gggcatgaaa attttgggaa gcggaacctg
     2881 cgtcaggcag gcgccattgc cggacgcgcc accggcttct ccacaatcgg caggttgatc
     2941 actgccgaaa gcactccgaa caataccgaa agccaccaga cgaggtcgta ggagccggtc
     3001 cgctcgaatg cgacaccgcc aatgagcacg ccaaggaacc caccgacctg gtggctgaag
     3061 aaggcaaagc cgaaaagcat cgccagccag cgcgtgccga acatcacagc gaccagtgcg
     3121 gacgtgggcg gcaccgtaga cagccacatg agccccgtga ccgcaccgaa taccagcgtc
     3181 gcgatgggac tcgcgggcag cgtgatgaac gcgacgatgg cgacagcccg gatgaagtag
     3241 atgctcgaaa gcagaaaacg cttcggcatg cgattgctga gccagcccga gcacaacgag
     3301 ccgatgatat tgaaaatgcc gataacggcg agcgtccagc ctccgatctc agccgacatg
     3361 ccgcggtcga tcaggtacgc gggcaggtgc acggtgatga atgcgagttg aaagccgcag
     3421 gtgaagaagc cgagcaccag caagatataa ctgcgatggc cgaatgcttc cgcgaaggcc
     3481 tggcgtgccg actgcgttgg cgtcgtcgcg accgatggcc cggcagcagt agctggcgtc
     3541 gcgagagcga gggagaatgg cagaatcaac aacgtgaccc caccgaaaat cagcagcgtt
     3601 tcctgccagc cgaatttgtc catcagcgcg actgcgatcg gcgaatacag gaattgtcca
     3661 aaagagccgg cggcggtgcc agcgccgaat gcaatcgaac gccatttttc cggcagcaac
     3721 ttgccaaagg ctccgagcac gatattgaac gagcagccgg acaatccaag accgatgagc
     3781 acgccggcgg agaggtgcag catttcgggc gtgctcgagt gcgccatgat cacgagccca
     3841 agggcgtaca atgcggcgcc gacgcagagc acgcgattgg tgccgaaacg atcggctata
     3901 ccgccagcga aaggttgtcc gatgccccac agcagattct ggatggcgac tgcgagcgcg
     3961 aacacatcgc gcccccagtg attggtctcc gacagcggtg tcagaaaaaa gccaagggac
     4021 gagcgcggac cgaaactgat catcgcgatc aggcagccac aggccacgac gacggcgggc
     4081 gtacgccatc ctatggacgc gggccgttca gtcgtcgcat gcattcagga agtctccagc
     4141 gcaggcgcgg accatatagg catcgaatag acgcgcccaa acgaaatttc gtgattgcct
     4201 gcatttgcgc gacgcatgat tagtcggagg aactatttgc gcgcgttttt ctggcgggtt
     4261 gaggcctgac cttgctctga cttgagccat tcagcgctat gacttacggg cccttttgct
     4321 tcctcggcgg cggcctgcct ttcggtcgtc gccgcgtcgc cccaggtcgg ctcatcgtcg
     4381 ccgtcgcccc atgcgcgtgg gcgatagaag gtatgcaccc cgagcttgta gactttcttc
     4441 atttcgccga cccagtcggg gcgcacccag tacgcgtgat agtgagtcga tttggatacc
     4501 tccggcatcc atagcttgcc gtcgagcatg tcgcgcgcga tgcgcttggc gcgctcccag
     4561 gcatcgggct cggtgacgac gtctggaatg ccgtcgcaag cgaaggtgaa ctgacaggca
     4621 ttgtggcgat gagcgttctg gtagaccacg ccgcagacgt cattcggata gaacggcgaa
     4681 aacacgcggt tcatcacgac ctgcgccacc gcgatctggc cgcgcaccga ctcgccacgt
     4741 gattcaaaat agactgcatt tactagacat ttttccgcct tggcgcgcgc gacgccagtc
     4801 agagccagcc gctccgctgg cgatcgcggc cgttgatcga tgccggtgac ttcgcccttg
     4861 ttggcgatgc tctcgccggc gttgtccgca ctctctggcg aagatcgtag cgccgactgc
     4921 ttgatgtcgg gatcgccgcg caaggcaagg accacagggg cttcgcccgg tgcccagggc
     4981 gcgatggcct cccggccggc ggccatcggg tcaattccga aatataattg ggttgcatcc
     5041 ttgccggcct tcggaggtgc ggcaggcgtc agatcggcgg gcggcaagtc g
//
LOCUS       DATDHO010000251         1520 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_455763, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000251 DATDHO010000000
VERSION     DATDHO010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_455763"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..190)
                     /locus_tag="VIY07_04950"
     CDS             complement(<1..190)
                     /locus_tag="VIY07_04950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381135.1"
                     /translation="MGNNTIDVGGFNSRHAAANSGARNEIGGQSGTNIFSNFFCRTIF
                     SVAQTALACEPLLLTRDIV"
     gene            146..1174
                     /gene="holA"
                     /locus_tag="VIY07_04955"
     CDS             146..1174
                     /gene="holA"
                     /locus_tag="VIY07_04955"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEY6381136.1"
                     /translation="MTAIKSSDVDRIVAHPAPAYAIFLVFGPDTGLVRERVDALVRAS
                     VDDPGDPFALARIEGDELMGNPARLVEEAHTVPLFGGRRAVLVRAGSRNIGHAIEAVL
                     NAPSPECRIIIEAGNLTKSSPLRALCEKAKVAAALPCYPDNERALASLIDEEMRANDL
                     TIGSDARDELIALLGADRLASRNEIRKLVLYAQGQKRIGLDDVIAVVADASQIALDEL
                     VDAVFAGKTAETDNEFGKARASGSSPAAIVSAAIRQVANLHKMKLAIESGESIEFTMR
                     RAAPPVHFSRERAVSEALRAWTPARLLRALEQLAEASLDMRRNSPLAESIAQRTLLSL
                     ARNARKAA"
     gene            1294..>1520
                     /locus_tag="VIY07_04960"
     CDS             1294..>1520
                     /locus_tag="VIY07_04960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381137.1"
                     /translation="MPRRDQRRWHETRAKFWHLVVVSTFFLTVIGAGVYLGTVTVIGA
                     LRTSTGLTELTAEGRTGRIARSLQDGKLCRY"
BASE COUNT          309 a          441 c          453 g          317 t
ORIGIN      
        1 ctacaatatc ccgggtcagc aacagcggtt cgcaggcgag cgcggtttgc gcgacgctga
       61 aaatcgtgcg gcaaaagaaa ttgctgaaaa tattcgttcc agactggcct cctatttcgt
      121 tgcgggcacc tgagttcgcc gcagcatgac ggctattaaa tcctccgacg tcgatcgtat
      181 tgttgcccac ccagctcctg cctatgcaat cttcctcgtg tttggaccgg atacgggact
      241 ggtgcgcgag cgcgtcgacg cgctggtgcg cgcgtctgtc gacgatcccg gcgacccctt
      301 cgccctggcg cgcatcgagg gcgatgagtt gatgggaaac ccggcgcggc tcgtggagga
      361 agctcatact gtgccgcttt ttggcggccg acgtgccgtc ctggtgaggg ctggatcgcg
      421 gaatattggc cacgctatcg aagcggttct caatgcgcct tcgcctgaat gtcgtatcat
      481 cattgaagcc ggcaacctca ccaagagctc gccactacgt gcgctatgcg agaaagcaaa
      541 agttgcggcc gcactgccat gctatccgga taacgagcgc gcgctcgctt cgctgatcga
      601 cgaagagatg cgcgcaaatg atctcacaat tggatctgac gcacgagacg agctgatcgc
      661 gttactcgga gcagaccggc ttgcttcgcg caacgagatc cgcaagctgg tactgtatgc
      721 gcagggccaa aaaagaatcg gccttgatga tgtgatcgcg gtcgtcgctg acgcctcgca
      781 gatagcgctt gatgagttag tcgatgccgt ttttgccgga aagacggcgg agacagacaa
      841 tgaattcggc aaggcgcgcg caagcggctc ctctccggcc gcaattgttt ccgcggctat
      901 ccgccaggtg gctaacttgc acaagatgaa gcttgcgatc gaaagcggag agtcaattga
      961 gtttaccatg aggcgcgcag cgcctcccgt gcacttcagc cgcgaacgtg ccgtcagtga
     1021 agcactgcgc gcctggacgc cggcgcgcct gctgcgagcg ctggagcaat tggcagaagc
     1081 ttcacttgac atgcggcgaa attcgccgct ggcggaatcg attgcccagc gaacgctgct
     1141 gtcgctcgcg aggaatgcgc gcaaggctgc ataatcgact gacgaaaggc acgagccaat
     1201 tcatttagaa ctggtcaatc ctttttcgtt aggaatttct tatgaacgcc gtttcccggc
     1261 ttgcgggcca cgcaacccga atgagggttg ccgatgcccc ggcgtgacca gcgtcgatgg
     1321 catgaaacgc gtgccaagtt ctggcacctc gtagttgtat caacattttt cctcacggta
     1381 atcggcgcgg gtgtctatct tggcactgtc acggtaatcg gcgcccttcg caccagcacc
     1441 gggctgactg aacttacggc tgagggccgc accggtcgca tcgcccgctc gttacaggac
     1501 ggcaagcttt gccgctatat
//
LOCUS       DATDHO010000252         3339 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_408251, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000252 DATDHO010000000
VERSION     DATDHO010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3339
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_408251"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VIY07_04965"
     CDS             complement(<1..212)
                     /locus_tag="VIY07_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015689125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HEY6381138.1"
                     /translation="MAIERHDVGPRMSKAVVNGNTVYLAGIVADNPKGKNVTEQTKDI
                     LKQIEGFLAKAGTDKSKLLSANIWIT"
     gene            332..829
                     /locus_tag="VIY07_04970"
                     /pseudo
     CDS             332..829
                     /locus_tag="VIY07_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003598253.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
     gene            complement(913..2007)
                     /gene="mutY"
                     /locus_tag="VIY07_04975"
     CDS             complement(913..2007)
                     /gene="mutY"
                     /locus_tag="VIY07_04975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEY6381139.1"
                     /translation="MTVAVRRPPRKKIERPDPVDLLAWYDRHARVLPWRARRGERANP
                     YRVWLSEIMLQQTTVKAVGPYYARFLLRWPTVTALAKASLDDVLRVWAGLGYYARARN
                     LHACARAVVERHGGQFPDDIAALRALPGVGAYTASAVAAIAFDLPAVPVDGNVERVVS
                     RLFAVEDELPAAKAAIKELAASLRPLQRFGDFAQALMDLGATICSPKRPACALCPWNS
                     ACAANARGDQETFPRKAPKQEGRTRRGAAFVALRADGRVLLRRRPATGLLASMMEVPG
                     TEWTHDFKDSPAQDSAPVLRADVRWRRIQGIVRHVFTHFPLELAIFIGQVPTATPAPK
                     GARWVKLGDLRNEALPNLMRKVLAHALERH"
     gene            2038..2514
                     /locus_tag="VIY07_04980"
     CDS             2038..2514
                     /locus_tag="VIY07_04980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HEY6381140.1"
                     /translation="MTKSSRSFPRPLSELLGATLGDALKAQGFASTEIISRWRDIVGS
                     EIAAHSEPLKINWPRPFGEQAPEPATLVLRVEGPAALEIQHLSGVILERVNRFFGWQA
                     IGRIALRQAPLKHRKTVVPPSPDPVLAAQIAETLPDVKDENLRQALARLGAAIKRN"
     gene            2659..3285
                     /locus_tag="VIY07_04985"
     CDS             2659..3285
                     /locus_tag="VIY07_04985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEY6381141.1"
                     /translation="MAFAAALTSASSLPPFLTEASAQTIPPAELMKPGTLPEMAIGND
                     KAPVTVIEYASMTCPHCAHFQETTFPELKKRYIDTGKVRYIFREFPLDNLAAAAFMLA
                     RCAAKDDSERYFAFIDTLFRQQRQWAIEKPIPPLLAIAKQAGLTEQTFNACLANQQML
                     DGIESIRQRAVDKFKVQSTPTFFINGTQHPGALSIEDMAKAIDPYLKG"
BASE COUNT          678 a         1038 c          978 g          645 t
ORIGIN      
        1 tcggtgatcc agatattggc cgacagcagt ttcgatttat cggtgcccgc cttggccaga
       61 aagccctcga tctgcttgag gatgtccttg gtctgttcgg tgacgttttt gcctttcggg
      121 ttatccgcca cgatgcccgc aaggtagacg gtattgccgt ttaccaccgc cttgctcatg
      181 cgtggtccga cgtcgtgacg ttctatggcc atgtctccac ctcttaaaaa ttttaaaagc
      241 tgccgcctct tcctatcgat ctttgaccac tttgggaacc tgcaccgcct gcgcgactta
      301 acgcttgaaa caattctcac ggaggcgcgc catgggttgg ttttccgcag acatgcacac
      361 gatgaaggat ctcttcctgc acagcatgca ggacatctat tacgccgagc atcagatcga
      421 aaaagccctt ccggatatgg tctcgaaggc gtccgatgcc gaactcaaaa aggggttcca
      481 gacccatctc aagcagacga aggggcagat caaacgcctc aaccaggcgt tcaagaaact
      541 gaacgtcaag ccgcaaggga ccaaatgccc ggcgattgac ggcatcatcg acgaagcaaa
      601 ggagatcgcg ggcgaggtcg acgacaagtt ggtgctcaac gccgcgctga tcgctgcggc
      661 acaagccgtc gaacactatg aaatcacgcg ctacggcacc ttggtggctt gggcaaggct
      721 tctgggtcat agcgacgtcg ccaaggtcct aaatatgaac ctgaaggaag agaaagccac
      781 cgacaagaag ttgaatggga ttgccaagcg caagatcaat cgcaaggcgg tagcgcgtca
      841 gcgcaagcgg ccgagcaggc tcgaacgaac acaagatgcg ttgatggatg cggcagcggg
      901 aattccggcg gtctagtgcc gttcgagggc gtgcgccagg actttccgca tgaggttcgg
      961 cagcgcttca ttgcggagat cgccaagctt cacccaacgc gcgccttttg gcgccggcgt
     1021 tgcggttggt acctgtccga tgaagattgc gagttcgagc ggaaaatgcg tgaacacgtg
     1081 gcgcacgatg ccttgaatgc gtcgccaccg tacgtcggcg cgaagcaccg gagccgagtc
     1141 ctgcgccggg ctgtccttga aatcgtgcgt ccattcggtg cctggaactt ccatcattga
     1201 cgcgagcaag cccgttgcgg gacgccgccg gagcagcacg cgcccatccg cgcgcaatgc
     1261 aacaaacgcg gcgccgcggc gcgtgcggcc ttcttgcttt ggcgccttgc gcggaaacgt
     1321 ttcctgatcg ccgcgagcat ttgcggcgca cgcgctattc cacgggcaca gcgcgcaggc
     1381 aggacgcttc ggcgagcaga tggtggcgcc aagatccatc aaggcctgcg cgaaatcacc
     1441 gaaccgttgc agcggacgca acgaagcagc gagctccttg attgctgcct ttgctgccgg
     1501 caattcgtcc tcgaccgcga acagccgcga caccacgcgc tcgacattgc catcgaccgg
     1561 tactgcgggg agatcgaagg cgatcgcggc cactgccgag gcagtatagg cgccgacgcc
     1621 gggcagcgcg cgcagagcgg caatatcgtc gggaaactgt ccgccatgtc gctcgacaac
     1681 cgctctcgcg caggcgtgca agtttcgtgc gcgcgcgtaa tagccgagcc cggcccagac
     1741 ccgcagcacg tcatcgagac ttgctttggc gagcgcagtc acggtcggcc agcgcaaaag
     1801 aaatcgggcg taatagggtc cgaccgcttt caccgtggtc tgctgcagca tgatctccga
     1861 cagccacaca cggtagggat tcgcccgctc gccgcgccgc gcgcgccagg gcaatacgcg
     1921 ggcatgccgg tcgtaccagg ccagcaggtc aaccggatcc ggcctttcga ttttcttccg
     1981 cggcggccgt cggactgcta cggtcatggc gccgaccatg gcacatgggg cactggcatg
     2041 accaagtcct cgcgcagttt tccccggccg ctttccgagc tcctcggtgc caccctgggt
     2101 gacgcgctca aggcgcaggg cttcgcatca accgaaatta tttcgcgctg gcgggatatc
     2161 gtcggatccg agatcgcagc tcatagcgag ccgcttaaaa tcaattggcc acgccctttc
     2221 ggcgaacagg cgccggaacc cgccacgctg gtgcttcgcg ttgaaggccc ggcggcgctc
     2281 gaaatacagc atctctcggg cgtcatcctc gaacgggtca atcgtttctt cggttggcag
     2341 gcaatcgggc gaattgccct acgccaggct cccctcaagc atcgcaagac ggtggtgcca
     2401 ccttctcccg atcccgtgct ggcggcccaa atcgccgaga cgttgccgga cgtcaaggac
     2461 gagaacttgc gtcaggcgct cgccaggctg ggtgcggcga tcaagcgaaa ttgagccctg
     2521 cgaccgcctt ggcagcctgg cccggcattg ccacaattat gctgtccagc tagccagtga
     2581 cggcataaac cgccatttca gcctcaggag cctcatttgc agatcacccg ccgcgaattt
     2641 tgccggagca cggctgcctt ggcgtttgcc gccgcgctga ccagtgcttc ttcccttccg
     2701 ccgtttctca cggaggcttc ggctcaaaca attcctccgg cggaattgat gaaacccggc
     2761 acgctgcccg agatggcgat cggcaatgac aaggcgccgg tgactgttat cgaatatgcc
     2821 tcgatgacct gtccgcattg tgcgcatttt caggaaacca catttcctga gctcaagaag
     2881 cgttacatcg acaccggcaa agtccggtac atcttccgcg agtttccgct cgataatctc
     2941 gccgcggccg cttttatgct ggcgcggtgt gccgccaagg atgacagcga acgatatttt
     3001 gccttcattg acacgctgtt ccgtcagcag cggcaatggg cgatcgagaa accgatcccg
     3061 cctttgctcg ccattgccaa acaggccggt ctaacggaac agactttcaa cgcctgcctg
     3121 gcgaatcagc agatgctcga tggcatcgaa agcatccgcc aacgcgccgt cgacaagttc
     3181 aaggtccagt cgacgcctac ttttttcatc aatggaacgc agcatccggg agccttgtcg
     3241 atcgaggaca tggccaaggc gatcgacccc tatctcaagg gctgacaagg gttttttggc
     3301 ctgagttccg agtggcgccc tccgcgcggg cctaggtat
//
LOCUS       DATDHO010000253         3751 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_110983, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000253 DATDHO010000000
VERSION     DATDHO010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3751
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_110983"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /gene="rplJ"
                     /locus_tag="VIY07_04990"
     CDS             complement(<1..294)
                     /gene="rplJ"
                     /locus_tag="VIY07_04990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEY6381142.1"
                     /translation="MDRAAKAESISELNGVFTTSNVVVVAHYSGLTVAQMQTLRKQMK
                     QAGAQVKVAKNRLAKIALKDTDAASIAPLLKGPTVLAYSGDPVAAPKVAIDFAK"
     gene            complement(829..1536)
                     /gene="rplA"
                     /locus_tag="VIY07_04995"
     CDS             complement(829..1536)
                     /gene="rplA"
                     /locus_tag="VIY07_04995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEY6381143.1"
                     /translation="MATGKRLKAARNGIDREKAYPISEAVKLVKERAKAKFDETIEIA
                     MNLGVDPTHADQMVRGVVTLPNGSGRTLRVGVFARGAKADEAKAAGADIVGAEDLVEK
                     VSKGEIDFDRCIATPDLMPLVGRLGKVLGPRGIMPNPKVGTVTMDVTNAVKGAKGGSV
                     EFRVEKAGIVQAGVGKASFPEDKLVENIKAFADAVQKAKPPGAKGHYINRVAISSTMG
                     PGVKVEIPSLFGAAAAH"
     gene            complement(1542..1970)
                     /gene="rplK"
                     /locus_tag="VIY07_05000"
     CDS             complement(1542..1970)
                     /gene="rplK"
                     /locus_tag="VIY07_05000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEY6381144.1"
                     /translation="MAKKVTGFLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNA
                     QTQKMEKGIPIPVIITTYQDRSFTFEMKTPPVSYFLKKAAKLESGAKTPGREPVGQVS
                     KKQVREIAEQKMKDLNCDTVEAAMKMVEGSARSMGLTVTE"
     gene            complement(2101..2664)
                     /gene="nusG"
                     /locus_tag="VIY07_05005"
     CDS             complement(2101..2664)
                     /gene="nusG"
                     /locus_tag="VIY07_05005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEY6381145.1"
                     /translation="MNDTAAATTSTKPKRWYIVHAYSNFENKVADSIREQAKQRGLSE
                     HIGEVLVPKEKVTEARRGRKVETERKFFPGYVLVKMDLTDEVYHLIKNTPKVTGFLGS
                     EKKPMPISDAEADRILHQVQEGIERPKPAVSFEVGEQVRVSDGPFASFNGVVEEVDEG
                     RSRVKVAVSIFGRATPVELEFGQVEKL"
     gene            complement(2687..2881)
                     /gene="secE"
                     /locus_tag="VIY07_05010"
     CDS             complement(2687..2881)
                     /gene="secE"
                     /locus_tag="VIY07_05010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEY6381146.1"
                     /translation="MATSPFKFLQEVREETRKVTWPSRRETAITTAMVFVMVAIASVF
                     FLVADQVIRIVVTFVLGMGT"
     gene            complement(2986..3061)
                     /locus_tag="VIY07_05015"
     tRNA            complement(2986..3061)
                     /locus_tag="VIY07_05015"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3026..3028),aa:Trp,seq:cca)
     gene            3428..>3751
                     /locus_tag="VIY07_05020"
     CDS             3428..>3751
                     /locus_tag="VIY07_05020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381147.1"
                     /translation="MLTRPPLNGSKVELIIDETGVGRAVGDIFNSHGIKPLRISIIAG
                     NEATQTRAVSTLDAMLHTGELRFAKELREAPTLQDELKDFRRHVSEAGRYSFSARDGK
                     HDDLVS"
BASE COUNT          678 a         1188 c         1078 g          807 t
ORIGIN      
        1 cttggcgaaa tcgatggcca ccttcggcgc cgccaccgga tcgcccgagt aggcgagcac
       61 ggttggcccc ttcagcaggg gcgcgatgga ggcagcgtcg gtgtccttga gtgcaatctt
      121 ggcgagacgg tttttcgcga ccttcacctg cgcgcccgcc tgcttcatct gctttcgcag
      181 cgtctgcatc tgggcaacgg tgaggccgga atagtgagcc accaccacga cgttcgaggt
      241 cgtgaagacc ccgttcagtt cgctgatgga ctccgctttt gccgctcgat ccactgcaag
      301 ctctttccgg tttgacggtt cacccgccgt agtgcacggg aaccgccggg ttgctaccag
      361 ccgtcccgct tgattcacgc gagcgaaccg gggcaggacg acgctctcaa aagcctgccc
      421 cccgaaacgg cgttgcgccg aagtcgggtc ttcgaggttc gaaccaaaag acgtgacccc
      481 acggtcacgc aaattcggat cgcttccccg tctgtgctgg ccccatcccg ggattaagcg
      541 tcgggccctt gcgaggcctt atgcgccggc agtcttggac aggtcggccg cccgttccgg
      601 gacggccctg cacgcttcac attcaacggt atcgggcttc tccccttcag agatcccacg
      661 cgggcttcta aaaggaataa gttccgctca ccatggattt gtagagacgc gcaaaggcgc
      721 gccgacaaat tgggccggca cgccctaggc cgttatctag acctttaaac ccgttttgcc
      781 aagtcccttt ttcgcaaaat cccggcaaaa cgggtccgcc tcagcacgtc agtgggccgc
      841 cgcggcgcca aaaaggctcg gaatttccac cttgacccct gggcccatgg tggaagaaat
      901 cgccacgcgg ttgatgtaat ggcccttagc ccccggcggc ttggctttct gtacagcatc
      961 cgcaaaggcc ttgatgttct cgaccagttt gtcctctggg aacgaggcct tgccgacacc
     1021 ggcctgaacg atgcccgctt tctcaacgcg gaactcgacg gaaccgccct tggcgccttt
     1081 taccgcgttg gtgacgtcca tcgtgaccgt gccgaccttg gggttaggca tgatgccgcg
     1141 cgggccgagc accttaccga gtcggccgac caggggcatc aggtcggggg tggcaatgca
     1201 gcgatcgaag tcgatttcgc ccttgctcac tttttcgacc aggtcctccg cgccgacaat
     1261 gtcggcgccg gcagcctttg cctcgtcggc cttggcaccg cgcgcgaaca cgcccacgcg
     1321 cagcgtgcgg ccggagccgt tcggcagcgt gacgacaccg cgcaccatct ggtccgcgtg
     1381 cgtcgggtcg acgccgagat tcattgcaat ctcgatggtc tcgtcgaact tcgccttggc
     1441 gcgttccttg acgagcttga ccgcttcaga gatcgggtaa gccttctcgc ggtcgatacc
     1501 gttgcgggct gccttcaagc gttttccggt tgccatggcg cttactccgt caccgtaagg
     1561 cccatcgaac gggcagagcc ttcgaccatc ttcatcgcag cctcgacggt gtcgcagttc
     1621 agatccttca tcttctgttc ggcgatctcg cgcacctgct tcttgctgac ctgtccgacc
     1681 ggctctcggc cgggcgtttt cgctccgctt tcgagtttgg ccgccttctt gagaaaataa
     1741 gacaccggcg gcgttttcat ctcgaaggtg aaggagcgat cctgataggt ggtgatgatc
     1801 accgggatcg ggatgccctt ctccattttc tgcgtctgcg cgttgaacgc cttgcagaac
     1861 tccatgatgt tgagaccgcg ctggccaagc gccggcccga tcgggggcga cggattggcg
     1921 gcgccggccg gcacctgcaa tttgaggaat ccagtaactt tctttgccat ctctcactcc
     1981 gttagtggtg cggatcttgg cggttggcag ccgcctcacc tcccacgtgt tgagcgagta
     2041 gtgattagcg aatagtgcgg ttgaaggttc acatttagtc gctactcacc attcgctttt
     2101 ctacagcttc tccacctgtc cgaattccag ttcgaccggc gtagcgcggc cgaagatcga
     2161 cacggctact ttcacgcgcg agcggccctc gtcgacttcc tcgacgacac cgttgaagga
     2221 ggcgaacggt ccatccgaca cgcgcacctg ctctccaact tcgaaagaaa ccgcgggctt
     2281 cggccgctcg atgccttcct gtacctggtg caggatgcgg tcggcctccg cgtccgaaat
     2341 cggcatcggt ttcttttcgc tcccgagaaa gccggtgacc ttcggcgtgt tcttgatgag
     2401 gtgatagacc tcatcagtga gatccatctt caccagcaca taacccggga agaacttccg
     2461 ctccgtctcg accttgcggc cgcgtcttgc ctcggtgacc ttttccttcg gcaccaggac
     2521 ttcaccaata tgttcagaca ggccgcgttg cttggcctgc tcgcggatgg aatccgcgac
     2581 cttgttttcg aaattcgaat aggcgtggac gatgtaccag cgcttgggct tggtcgacgt
     2641 cgtcgcggca gctgtatcgt tcatccctct tgagcctctt ggaccttcag gttcccatgc
     2701 cgagcacgaa ggtgaccaca atgcggatca cttgatccgc cacaaggaag aaaaccgacg
     2761 caatcgccac catcacaaac accatggcgg ttgtaatcgc cgtttcgcgg cgcgacggcc
     2821 aggtcacctt gcgcgtctct tcgcgtactt cctggagaaa cttgaatgga gacgttgcca
     2881 ttccgacgcg acctcgattt caatccttgt ctgtcaatcc caatgtagtc acggccaccg
     2941 catttgcgca ggcctgaagg cttcgctcaa ctgcgggccc gtgcctggca ggagtggcag
     3001 gactcgaacc tgcaaccccc ggttttggag accggtgctc tagccattga gctacactcc
     3061 tccgaaagcg gatgcggcgg accatagagg tccgccgcgg cgatgtcatg cattatacat
     3121 ggcacgaaag caaggtcgca gatggcctca atttgcggtt tttcgggcat cggacgtcgt
     3181 tggactatgt ctgcccaaag gcggggctgg cgaggaactg gcagggggcg tctgttgcgc
     3241 ccccaacttc ggcacggcgg ctacagcccc tgcccgccac ccgacaggta gccagcgaag
     3301 cccgcgaaga ctggagcggg tgagcggaat cgaacgccgt catcagcttg gaaggctgtt
     3361 gtcattgatt tcattggctt tcctttgata ttccctttct ctctctacag ccaagaacat
     3421 cggtacgatg ctcacccgcc cgccgctcaa tggcagcaag gtcgagttga tcatcgacga
     3481 gaccggagtc ggccgggcag ttggcgacat cttcaacagc cacggcatca agcctctccg
     3541 tatctccatc attgccggca atgaggcgac ccagacaaga gctgtgtcga cgttggacgc
     3601 gatgctccac accggcgagc tccgctttgc gaaggaattg cgcgaggcgc cgacgctaca
     3661 ggacgagctc aaagactttc gccggcacgt cagcgaggct ggccggtatt ccttcagtgc
     3721 gcgagatgga aagcacgacg acttggtgtc a
//
LOCUS       DATDHO010000254         3102 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_259844, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000254 DATDHO010000000
VERSION     DATDHO010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3102
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_259844"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VIY07_05025"
     CDS             complement(<1..746)
                     /locus_tag="VIY07_05025"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381148.1"
                     /translation="MRRRDFITILGGSAFAWPIAARGQKSNVARIGALYIGLADGDSF
                     KKELREGLHQLGYVEGKNIAFEFRSADGKLDRLPELAAELVRLKVDVIVPLYVPSALA
                     AKQATREIPIVIIAADPVETGIVPSLARPGGNITGVSLMSAVFVGKCVELFHDMMPAM
                     RRVAALTNAADALFAKLVLEHVEVAARPSGIKVQPITLRGPDQELDAAFAAMAKEQAD
                     AVVIQGSLSTKRLADLARQHRLPAASSTRA"
     gene            complement(949..2967)
                     /locus_tag="VIY07_05030"
     CDS             complement(949..2967)
                     /locus_tag="VIY07_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY6381149.1"
                     /translation="MKDRGRSAAPKARKAPVDDFSIADLQEQVGALTRELQEAREQQT
                     ASSEVLGVISSSAGELQPVFETILGNATRICEAKFANLFLYETNSFRIAAQLNAPPAY
                     AERWRRQPTLTVSDNPQNPLTRLVASKKVVAITDLMAEQGYIDRDPRFVALVESAGAR
                     SHLVVPMLKEDELIGAIVVYRQEVHPFTEKEIELVRNFAAQAVIAIENTRLLNELRES
                     LQQQTATADVLKVISRSTFDLPTVLDTLTESAARLCEADKGMIFQRDGDVYRFGANYG
                     FSSEAEQYALKHPVWPDRRGAVGRVSLESRTIHIPDVLADSEYRLADYQKTLGYRTIL
                     AVPLLRGGEVIGVLSLTRDLVNPFTEKQIELVTTFTDQAVIAIENVRLFDEVQSRTRE
                     LAKSLEELRTTQDRLVQTQKLALLGQLTAGIAHEIKNPLNFVNNFSGISAELINELQD
                     TLKGIPLDGKARTEINELTETLKSNFDKVAHHGRRADAIVKNMLQHSREGSGEHRVID
                     INALVEEMLNLAWHGARAETQGFEIKLKQSFDAGGADVFPQDIRRALLNVISNGFYAA
                     TKRRAETDGGGYEPTLTASTKNLGDRVEIRIRDNGTGITPDVKEKMFNPFFTTKPTGE
                     GTGLGLSISHDIIVKQHAGSIEVDTQPGEFTEIRVILPRVAALLPERS"
BASE COUNT          640 a          879 c          874 g          709 t
ORIGIN      
        1 aatgcgcgcg tgcttgaggc cgctggcaaa cgatgctgac gagcaagatc agcaagacgc
       61 ttcgtggaca agctgccttg aatcacaacg gcgtctgcct gttccttcgc catggccgca
      121 aaagccgcgt caagttcctg atccggtccg cgcaacgtga ttggctgtac cttgatccct
      181 gagggacggg cggcaacttc aacatgctcg aggaccaact tcgcgaacaa tgcatccgcc
      241 gcgtttgtga gagcggctac ccggcgcatg gccggcatca tgtcgtgaaa cagttcaacg
      301 catttgccaa cgaacacagc agacatcaga gacacgccgg taatgtttcc gccgggacgg
      361 gccaagctcg gaactatgcc ggtttcgaca gggtcagctg cgattatcac aatagggatt
      421 tcacgtgttg cctgcttggc tgccaatgcg ctggggacgt atagcggtac gatcacgtcg
      481 accttgaggc gcaccagttc ggccgcaagt tcgggaagcc gatctagctt tccgtccgcc
      541 gaacgaaact cgaatgcaat attttttcct tctacatagc caagctgatg cagtccctca
      601 cgaagctctt tcttgaacga atccccatcc gccaggccta tgtagagcgc gcctattcga
      661 gcgacattag atttctgccc gcgcgccgca atcggccatg cgaacgctga gccgccgaga
      721 attgtaatga aatcgcgccg tctcattagc cgcaccgcgg tctcaggacg ggtcatcgta
      781 gcgatctaca caaccatcca aaaatgggcc gaattgtcgc aatgtccgct ttgggtaata
      841 agcggacata tgtagtgcaa aacggcacgt ccgctttact cctgaaagcg gacatatgca
      901 gtgcagcagc gcgtgtctgc tttgggccaa aagcggacat cgtgacgatt acgagcgttc
      961 ggggagtaag gcggccacgc gcggcaaaat caccctgatt tccgtgaact cgcccggctg
     1021 tgtatcaacc tcgattgagc ccgcatgttg cttgacgatg atgtcgtgac tgatggagag
     1081 gccaaggccg gtgccttctc cggtcggctt ggtcgtgaag aacgggttga acatcttttc
     1141 tttcacgtcc ggcgtgatgc cggtgccgtt atcgcgaatc cggatctcaa ctcgatcacc
     1201 gaggttcttt gtcgaggctg taagagtcgg ctcgtagccg ccgccgtctg tttccgctct
     1261 gcgcttagtt gctgcataga agccgtttga gatcacattc aagagagccc gccggatgtc
     1321 ctgcgggaaa acatctgccc caccggcgtc aaaggattgc ttgagcttga tctcaaaccc
     1381 ttgcgtctcg gcccgtgccc cgtgccatgc cagattgagc atttcctcaa cgagcgcgtt
     1441 gatatcaatc actcggtgct cacctgagcc ttcgcgcgag tgctgcagca tattcttgac
     1501 gatggcatcc gcgcgtctgc catgatgcgc gaccttgtcg aagttgctct ttagcgtctc
     1561 ggtcagttcg ttgatttcag ttcgagcttt accgtcgagc ggtatgccct ttagggtgtc
     1621 ctgcaattca ttgatcagtt cggcagagat gcctgaaaaa ttgttgacga agttgagcgg
     1681 attcttgatc tcgtgggcga taccggcagt cagttgtcca agtagggcga gtttctgtgt
     1741 ctgcacgagg cggtcctgcg tggtgcgcaa ttcctctagc gacttcgcca gttcgcgcgt
     1801 gcgcgactgc acctcatcga acaagcgcac gttctcaatc gcgatcacag cttggtctgt
     1861 gaaggttgtc acaagctcaa tttgcttctc tgtaaatggg ttcaccaaat cgcgggtcag
     1921 ggagaggaca ccaattacct ctcccccacg caataacggc acggcaagaa tagtgcggta
     1981 gcccaatgtc ttctgatagt cagccaaacg gtattcggaa tcggcgagca cgtctggaat
     2041 atggattgtc ctactttcca gactgactcg gccaacagcg ccgcgccggt ctggccagac
     2101 aggatgcttg agtgcgtact gctctgcctc ggacgaaaag ccatagtttg cgccgaagcg
     2161 ataaacgtcc ccgtcgcgtt ggaagatcat gcccttatcc gcttcgcaaa gccgggcggc
     2221 tgactcagtc aacgtgtcga gcaccgtcgg cagatcgaac gtcgagcggc tgatgacctt
     2281 gagcacgtcg gcggtggcgg tttgctgctg gagggattca cgcagttcgt ttagtaggcg
     2341 tgtgttctcg atggcgatca cggcttgcgc agcgaagttt ctgaccagtt caatttcttt
     2401 ttcagtaaat ggatggacct cttggcggta gacgacaatg gcaccgataa gctcgtcctc
     2461 ctttagcatg ggcaccacga gatgactccg agcaccagca gattctacaa gcgcaacgaa
     2521 ccgaggatcg cgatcgatat agccctgctc agccatcaag tccgtgattg ctactacctt
     2581 cttgcttgcg actagtcggg tgagcgggtt ctgagggtta tcgctgaccg taagggtggg
     2641 ctgtcgacgc catcgctcgg cgtaagccgg tggggcattc agctgagcag caatacggaa
     2701 tgagttggtc tcgtacagaa acaaattggc gaacttcgcc tcgcagatgc gtgtcgcgtt
     2761 ccccaagatc gtctcgaaaa ccggctgcag ctcaccggcc gaactggaga tgaccccaag
     2821 cacttccgag ctcgccgtct gctgctcacg cgcctcttgc agttcgcggg tgagagcccc
     2881 gacttgttct tggagatcgg ctatcgaaaa atcatcgacc ggtgctttgc gagctttggg
     2941 cgcagcgctg cggccgcggt ccttcacggg ctttacgctt ccacggcgtc gctgcatgtc
     3001 gcccccgacg gtacacgacg atgccctact ctaagcgagt tccgacactc gcgctatggt
     3061 agtaccagag ggatgcgagc tcgatttatt cgagcgatgt cc
//
LOCUS       DATDHO010000255         3065 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_309047, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000255 DATDHO010000000
VERSION     DATDHO010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3065
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309047"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..914)
                     /gene="glsA"
                     /locus_tag="VIY07_05035"
     CDS             complement(<1..914)
                     /gene="glsA"
                     /locus_tag="VIY07_05035"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018408079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004359 - glutaminase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase A"
                     /protein_id="HEY6381150.1"
                     /translation="MDARTNMVAGFTGRTGEILQPPLLHFLARSRAEIADDHSGAVAD
                     YIPELTKADPDDFGISIATTDGYVYEVGDSDVPFTIQSISKAFVFALALETIGAEKVE
                     SLIGVEPSGDVFNSIRLRADNRPFNPMVNAGAITCSGLIYDTEGEDAFVAILTMLSRF
                     SGRKLGVDEQVFASERATGDRNRAIAYLLRNHGVIKGDVDAILDVYFGQCSVLVTARD
                     IAVMAATLANRGRNPLSGEQVISPYAVARTLSVMTSSGMYDYAGEWIYRVGIPAKSGV
                     GGGIIAALPSQLGLGTYSPRLDKHGNSVR"
     gene            complement(1025..2806)
                     /locus_tag="VIY07_05040"
     CDS             complement(1025..2806)
                     /locus_tag="VIY07_05040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY6381151.1"
                     /translation="MTVETHGIGDVDESAHTRFTTWLRGIGVRQVRIATGLVMFAYIF
                     SHFFNHALGNISYDAMETWLKYHVAWWRFPLINDTLYLSAIVHFSLGLWALYQRRHFR
                     YSAAEITQLVLGLTIPLWLASHLGAERLTGLLFGTPPFNYATALFAYWVAAPYNIAVQ
                     FISLTVAWIHACIGLYFWLRLKSFFDWAAPILLAIAILMPPLAMIGAHHAGREVAELS
                     DDPEWRKEHLQRIPADQARLITEISLIYFPIAYCGAIALVFVARGVRALRERQGGVIT
                     ITYPNRQVRVPKGLSVLETSLRFKIPHASVCGGRARCSTCRIRVLSDRSKLPRPSGRE
                     AFVLEAIGVSANPSIRLACQLRPLSDVTVIPILPASMNAELLRKGSRMNIGKEHYIVS
                     MFVDMRGSTKLAEARLAFDVVFLINRFLAACSQAALDAGGKPNQFLGDGVLALFGIDV
                     DPKTACRQAIRAAANVATNIEYMNHQLASDLPEPIQYGIGIHGGEVIIGDVGFQDHSV
                     FTALGDPVNVAARLQDMTKTLDCKAIISEEVFATAGIRADALAHTEVAIRGREEPMVV
                     RVAADPSVLAGLLENDVREPGKAGATS"
BASE COUNT          661 a          910 c          933 g          561 t
ORIGIN      
        1 cgtacgctgt tgccgtgctt gtcgagacgc ggcgagtaag tgcccagtcc aagctgcgac
       61 ggcagcgcgg caattatgcc gccgcccacc ccgctcttcg ccgggatgcc gaccctgtaa
      121 atccattcgc cggcgtaatc atacatcccc gagctcgtca tcactgacag tgtgcgcgcg
      181 acggcgtagg ggctgatgac ctgctcgccg ctgagcgggt ttcggccgcg attggcgagc
      241 gttgctgcca tcacagcaat atcgcgcgcg gtcaccagga ccgaacactg gccgaaatag
      301 acgtccagaa tggcatcgac atcgcctttt atgacgccat gattgcgcaa aagataagca
      361 atcgcgcgat tgcgatcgcc ggttgcacgt tccgaggcaa acacctgctc atccacgccc
      421 agcttccggc cggaaaaccg gctcaacatt gtgaggatag cgacaaatgc atcctcaccc
      481 tcggtgtcgt aaatcagccc cgagcaggtg atggcgccgg cattgaccat cggattgaag
      541 gggcgattat cggcgcgcag ccggatcgaa ttgaagacat ccccgctcgg ctcgaccccg
      601 atcaggcttt cgactttctc ggcgccaatc gtttcaaggg ccagcgcgaa tacgaaggcc
      661 tttgagatgg actgtatggt gaacggcacg tcgctgtcgc cgacttcgta gacatagcca
      721 tcggtggttg cgatgctgat gccgaaatcg tccggatcgg ccttcgtgag ctcgggaatg
      781 tagtctgcaa cggcaccgct gtggtcgtct gcgatttcgg cacgggagcg cgccagaaaa
      841 tgcagcaatg gtggctggag aatctcaccc gtgcgtcccg tgaagccagc aaccatattt
      901 gtgcgcgcgt ccatgctttt cccccgccag agagactgag aagcaagccc tgtgccggtt
      961 cggaagacgc gaacgacgcg gcctgtgaat ggcgatcaac ttcggtatga ggtcggaaat
     1021 cgccctatga ggtggcgccg gcctttcccg gctcccgcac gtcgttttcg agcaggcccg
     1081 cgagcacgct cggatcggcc gcgacacgca cgaccatcgg ctcctcgcgg ccgcggattg
     1141 cgacttcggt gtgggcgagc gcgtcggccc ggattccggc ggttgcaaac acctcttcag
     1201 aaatgatggc cttgcagtcg agggtcttgg tcatatcctg cagcctcgca gccacgttga
     1261 ccggatcgcc aagcgccgtg aacacgctgt gatcctgaaa gccgacatcg ccgataataa
     1321 cctcccctcc atgaatgccg atgccatatt ggatcggctc cggtagatcg gatgcgagct
     1381 ggtggttcat gtattcgata tttgtcgcga cgttcgcggc cgcgcggatc gcctgccggc
     1441 atgcggtttt cggatcgaca tcgattccaa acaaggcaag gacgccgtcc ccgaggaact
     1501 ggtttggctt gccgcccgcg tcgagcgccg cctgcgagca cgctgcgaga aaacgattaa
     1561 tgagaaagac aacgtcgaag gccagccgcg cttcggccag cttggtcgac ccgcgcatgt
     1621 ccacgaacat gctgacgatg taatgttcct tgccgatgtt catgcgactg cctttgcgca
     1681 gcagttcggc attcatgctc gccggcagaa tcggaatcac cgtcacgtcc gacagcggcc
     1741 gaagctggca ggcgagacgg atcgacgggt ttgctgaaac gccgatggcc tccagcacga
     1801 aggcctcgcg gcccgaagga cgcggcagct tgctgcggtc gctcagaacg cggatccggc
     1861 acgtcgaaca gcgcgcgcgg ccgccgcaaa cgctggcgtg cggaattttg aaacgcaggc
     1921 tggtctcgag gacgctcaag ccctttggga cgcgcacctg ccggttcggg taagtaattg
     1981 tgatcacgcc gccctggcgt tcgcgcaacg cgcgcacgcc gcgcgccacg aaaaccaggg
     2041 cgatcgcacc gcaatatgcg atcgggaaat aaatgagact gatctccgtg atcagccgcg
     2101 cctggtcggc agggatccgc tgcaaatgct ccttgcgcca ttccggatca tcggaaagct
     2161 cggccacttc gcggccggcg tgatgcgcgc cgatcatggc gagcggcggc atgagaatcg
     2221 cgatggcaag aaggatcggg gctgcccagt cgaaaaacga tttcagtcgc agccagaaat
     2281 agagaccgat gcaggcgtgg atccacgcca ctgtcagcga aatgaactgc acagcaatgt
     2341 tatagggcgc tgcaacccag tatgcgaaca gcgcggtcgc gtaattgaat ggcggcgttc
     2401 cgaacaagag cccggtgaga cgttcagcgc cgagatgact ggcaagccag agcggaatgg
     2461 taagacccag aaccagttgc gtgatctcgg cggccgagta gcgaaaatgc cgccgttgat
     2521 agagtgccca caggccaaga gaaaaatgga cgatggccga caggtaaagc gtgtcgttga
     2581 tgagcggaaa tcgccaccac gcgacgtggt atttcagcca cgtctccatc gcgtcatagg
     2641 aaatattgcc aagcgcatga ttgaaaaaat gcgagaagat gtacgcgaac atgaccaggc
     2701 cggtggcgat ccgcacctgg cgcacgccaa tcccgcgcag ccatgttgta aacctggtgt
     2761 gcgcgctttc gtcgacgtca ccgatcccgt gggtctctac cgtcacgctg aaccgtcatg
     2821 aatggaaaac gaagacaatg ggcgcgacgt caaaaatcgc ccacaccgat aatagggagc
     2881 gcagtgtagc cattgcaatg aggtaggtca gagccgtgtt ttcgccggtt cgtacaaaaa
     2941 ggttccgtcg cgcgcgatca gagagcccga ggaaaggcct cgcttgttcg cacgcatgaa
     3001 atggcgacta gcgtctactt ccagtcaact ggagcactta gcggagccag cggattcaga
     3061 tcgtt
//
LOCUS       DATDHO010000256         1752 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_111237, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000256 DATDHO010000000
VERSION     DATDHO010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111237"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1752)
                     /locus_tag="VIY07_05045"
     CDS             complement(<1..>1752)
                     /locus_tag="VIY07_05045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEY6381152.1"
                     /translation="NMFTLIALGTGTAYAYSVAAALWPGLFPDAFRGHGGGIALYFEP
                     AAVIVTLVLLGQVLELRAREATSGAIRALLDLAPKTARRIKDDGSDEDVALDAVQVGD
                     RLRVRPGEKVPVDGIVIEGRSAVDESMITGESMPVTKEKDSRVIGGTINTSGSFMMRA
                     DKIGRDTLLSHIVQMVAAAQRSRAPIQRLADQVSAWFVPAVIAVAVGAFAAWVAFGPE
                     PRFGYGLVAAVSVLIIACPCALGLATPMSIMVGVGRGAQAGVLIKNAEALERLEKVDT
                     LIVDKTGTLTEGKPKVVSIVPASGFDETQLLKLAASVERGSEHPLASAIVAAARERKL
                     ELSAVEGFDAPAGKGVVGDVEGKQIALGNARFLAELNIDTNALAAEGERLRGDGATAL
                     FIAVDGKPAGIIAIADPIKETTPNALSALASSGIRVVMLTGDNRTTAQAVARRLGIAE
                     VEAEVLPDQKSAVVEKLRHEGRVVAMAGDGVNDAPALAAADVGIAMGTGADVAIESAG
                     VTLLKGDLTGIVKARQLSAAVMRNIRQNLFFAFVYNALGVPVAAGVLYPISGILLSPI
                     IAAAAMALSSVSVIANA"
BASE COUNT          312 a          572 c          555 g          313 t
ORIGIN      
        1 gcgcattggc aatgacgctg accgacgata gcgccattgc ggctgcggca atgattggcg
       61 acagcagaat cccggatatc gggtagagca cgccggcagc gaccggcacg cccagcgcat
      121 tgtagacgaa tgcaaaaaac aggttctgcc ggatgttgcg catcacggca gccgaaagct
      181 ggcgcgcttt cacaatgccg gtgaggtcgc ctttgagcag ggtcacgccc gcgctttcga
      241 tcgcgacatc ggcgcccgtg cccatggcga tcccgacatc ggccgccgcc agagcgggtg
      301 cgtcattgac cccgtcgccc gccatggcca ccacgcggcc ttcatgtcgc aatttttcga
      361 ccaccgcact cttctgatcg ggcaacactt cagcctcgac ctccgcaatg ccgaggcgcc
      421 gggcgacagc ctgcgctgtc gtgcggttat cgccggtgag catgaccacc cgtattccgc
      481 tcgaggcgag ggcgctcaat gcgtttggcg tggtttcctt gatcgggtca gcgattgcga
      541 taatcccggc gggcttgccg tctaccgcaa tgaaaagtgc ggtagcgcca tcgccgcgca
      601 ggcgttcgcc ttccgcagca agggcgtttg tatcgatgtt caattcggcg aggaaacggg
      661 cattgccgag agcgatctgc ttgccttcaa catctcctac gacgcctttt cccgcagggg
      721 cgtcgaaacc ttcaaccgct gaaagctcca gcttgcgctc cctggccgcc gcgacgatcg
      781 ctgacgctaa tggatgttcg ctgccgcgtt cgacactggc cgcaagtttc agcagctgcg
      841 tttcatcgaa gccggatgcc ggcacaatcg aaacgacttt cggcttgccc tcggtgagtg
      901 tgccggtctt gtcgacgatc agggtgtcca ccttttccag acgttccagc gcctccgcat
      961 tcttgatcag tacgccggct tgtgcgccgc ggccgacccc gaccatgatc gacatcggcg
     1021 tggcaagtcc gagtgcgcaa gggcaggcga tgatcagcac gctgactgcc gctaccaggc
     1081 catacccgaa ccgcggttcg ggaccgaatg ccacccaggc ggcgaatgcc ccaaccgcga
     1141 ctgcaatgac agcgggcacg aaccaggctg agacctgatc ggcgagacgc tggatcggcg
     1201 cgcggctgcg ctgcgcggct gcgaccatct gaacgatgtg agagagcagg gtatcgcggc
     1261 cgatcttgtc ggcgcgcatc atgaagctgc cgctcgtatt gatcgtgccg ccgatgacgc
     1321 gagagtcttt ttccttggta accggcatcg actcgccggt gatcatggac tcgtcgacgg
     1381 ctgagcggcc ttcgatcacg atcccatcca ccggaacctt ctcgccgggg cgaacgcgca
     1441 gccggtcgcc gacctggacg gcatcaagcg caacatcctc gtcgctgccg tcatctttga
     1501 tgcggcgcgc ggtcttggga gcaagatcga gcagtgcgcg gatcgcaccc gacgttgctt
     1561 cgcgggcgcg cagctccagg acctggccga gcaggaccag cgtcacgatc acggccgcgg
     1621 gctcgaagta gagcgcgatc ccgccgccgt gcccgcggaa ggcgtcgggg aagaggccgg
     1681 gccagagcgc ggcggccacg ctgtacgcgt acgcggtgcc cgtgccgagc gcgatgagcg
     1741 tgaacatgtt ga
//
LOCUS       DATDHO010000257         2031 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_260137, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000257 DATDHO010000000
VERSION     DATDHO010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260137"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..186)
                     /locus_tag="VIY07_05050"
                     /pseudo
     CDS             complement(1..186)
                     /locus_tag="VIY07_05050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087508.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
     gene            complement(193..1476)
                     /locus_tag="VIY07_05055"
     CDS             complement(193..1476)
                     /locus_tag="VIY07_05055"
                     /inference="COORDINATES: protein motif:HMM:NF024826.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SidA/IucD/PvdA family monooxygenase"
                     /protein_id="HEY6381153.1"
                     /translation="MERDLIGVGAGPANLSLASLLTTAKERGLTSITATFFERQAKIF
                     WHSLQMFPGTLMQTEFYRDLVTPIDPTSRFSFLNYLKAQARLDQFFCSSTIYPTRREF
                     EDYFRWVAGQIGDVVFGVAVNCVDYDPKKNVFVFDAAAHGGCEAKHVVFGCGGQPKSG
                     VEESRSRRIVDVSRLLAFEFPETLNRILVVGGGQSAAECLNYLLDKFSERPVRIDWVT
                     SETSFRALDTSNFSREMFSTAYAQVFSSLDGKAREKINIDDKSVANGMLPLFAQALYQ
                     RLYQLRHVPTPEKACPIVHVQANTEVVEAQENPSDVAVKASIVSTGNTDVAVYDCVIL
                     CTGLDDETILESSIIGPELRRRIDRNQDRTGYAVTWDGPSDRMIFVQSQNKDTHGLGD
                     SSFVTAPGRNAAILNSIAGREIYKIDESDLLVALR"
     gene            complement(1848..>2031)
                     /locus_tag="VIY07_05060"
     CDS             complement(1848..>2031)
                     /locus_tag="VIY07_05060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381154.1"
                     /translation="ENETVRNYRERIRQCEELGEFAMAEQIREILVQEQDHQIDLATA
                     LGEDVPDLNRPARSRK"
BASE COUNT          436 a          582 c          578 g          435 t
ORIGIN      
        1 gtcgaccaca aagatgaact ggatgcagtt cggctgttct ggccaaagtg tgccgtcatt
       61 gtcgaatgcc gcgatgcgat cgctcggcgg tacgaaatcc accgtcccgt gctcagtgac
      121 ccgcctcaca aaatcgacca aacgcgcctt cgccgcgcct tcgttccaag aggggagtgg
      181 atcggccagc acttatctca aggcgaccaa caggtcgctc tcgtcgatct tgtagatttc
      241 gcgaccggcg atggaattca agatggccgc gttcctcccc ggcgccgtga caaagcttga
      301 atcccccaat ccgtgcgtgt ctttgttctg cgattgaacg aagatcatgc ggtcggatgg
      361 gccatcccat gtcaccgcgt atccagtgcg gtcctgattc ctatcaatgc gccgcctcaa
      421 ctccggtccg atgatggacg attccaatat ggtttcatca tcgaggccgg tgcacaaaat
      481 gacgcaatcg tagacggcaa catcagtgtt accggttgag acaatgctgg ctttcaccgc
      541 aacgtccgag ggattctctt gtgcttcgac gacttcggtg ttggcctgca catgaacaat
      601 tgggcaagcc ttttcgggcg tcggaacgtg ccgcaactgg tacagcctct gatagagcgc
      661 ttgggcaaaa agaggcagca tgccgttggc gacgctcttg tcatcaatgt tgattttttc
      721 gcgcgccttg ccgtcgagac tcgaaaacac ctgtgcgtag gcggttgaaa acatctcgcg
      781 cgaaaagttg ctagtatcca gggcgcgaaa tgacgtttcg ctcgtaaccc aatcgatccg
      841 caccggtcgt tctgaaaatt tgtcgagcag atagttcagg cactcggcgg ccgattgccc
      901 tccgccgaca acgagaatgc ggttcagcgt ctctggaaac tcaaaggcga gaagtctgga
      961 gacatcgacg attctcctcg accggctctc ttcgacgccg gactttggct gtccgccaca
     1021 gccgaaaacg acgtgctttg cctcgcagcc gccatgggct gcggcatcga agacgaacac
     1081 gttctttttg ggatcgtagt ccacgcagtt cacagccacc ccgaagacta catcgccaat
     1141 ctgccccgct acccacctga aataatcttc gaactcacgc cgcgtcggat agatcgtcga
     1201 tgagcagaag aattggtcaa ggcgcgcttg cgccttcaga tagttgagga acgaaaatct
     1261 gctggtagga tcgatggggg tgacgagatc ccgatagaac tcggtttgca tcagagttcc
     1321 cgggaacatc tgcagcgagt gccagaatat ttttgcctgg cgctcgaaga aggtcgcggt
     1381 gatcgaggta agcccgcgct ccttcgcagt cgtaagcaga gaggcgaggc tgagatttgc
     1441 cggccctgcg cctacgccta tgagatccct ctccacagtt tgacggaaat cctcctctct
     1501 gaggatggcg ggaagcggac ggcctggtcg ctagagcgct gaaagaatct gatgagcgag
     1561 gtccagcaag acgagtccaa gccaactgcc aaaaattagg cccgccaatc tccacgcctg
     1621 caactcactc atgacggtcc ctcgatactc tcgggggcta cgcctcaact cgttgcagga
     1681 aagtacgtgg cgagttgtgg aagcggagcc ggccgctact tgagacagga ctccgtttct
     1741 agcagaagga aaaacaggaa gtcgagtgtc aaagcggaga tcgtgtccgc ggttcgtctg
     1801 ctgtgccaat ttggaacttc gacgccggcg cctgacgcgc atcaggatca tttccgactt
     1861 cgagcagggc ggttcaggtc cggcacgtcc tcgccgagag cggtggcaag gtcgatctgg
     1921 tgatcctgct cttgcacgag gatctcgcga atctgctcgg ccatggcgaa ctcgccgagc
     1981 tcctcgcatt gccggatgcg ctcgcggtag ttgcggacgg tctcgttttc g
//
LOCUS       DATDHO010000258         2093 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_260187, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000258 DATDHO010000000
VERSION     DATDHO010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2093)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2093)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2093
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260187"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1838)
                     /locus_tag="VIY07_05065"
     CDS             complement(<1..1838)
                     /locus_tag="VIY07_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEY6381155.1"
                     /translation="MAKLPDKPRNLRKKDPARPTRAKAARPDEPTTPDELADVLNPGI
                     GRGTAGRGSGTGLQPPPDNSWDRRRDFSEAHRARKSTPREFNDSQQRDYAASPITGLD
                     PQLANELGLGDEEAALPPALKKDDPKYRLPRADLPTQPGGFAGIASQQSLERLLREGR
                     PEFTTTPWTPHRPPRPEKSEGGKKLVIASDFEPKGDQPQAIEELVAGVKRTDRTQVLL
                     GVTGSGKTFTMAKVIEATQRPALILAPNKTLAAQLYGEFKSFFPDNAVEYFVSYYDYY
                     QPEAYVPRTDTYIEKESTINEQIDRMRHSATRALLERDDVVIVASVSCIYGIGSVETY
                     SAMTFTLKQGGKINQRQLLADLVALQYKRTQGDFYRGSFRVRGDTVDIFPAHYEDRAW
                     RIHLFGDEIEKIEEMDPLTGQKTDELDFVKIYANSHYVTPRPTLLQAIAGIKQEMRER
                     LDQLNAAGRLLEAQRLEQRTTFDLEMMEATGSCAGIENYSRYLTGRKPGEPPPTLFEY
                     VPDDALVFVDESHVTIPQLGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMR
                     PQSLAVSATPGPWEMEEARGVFVEQVIRPTGLIDPPVDVRPARTQV"
BASE COUNT          369 a          625 c          676 g          423 t
ORIGIN      
        1 tcgacctggg tgcgcgccgg ccgcacgtcc acgggcggat cgatcaggcc ggtggggcgg
       61 atgacctgtt ccacgaagac gccgcgcgcc tcttccattt cccacggacc cggcgtggcg
      121 gatacggcca gcgactgcgg ccgcatagcg tcccactcct cgaagcgcag cggccggttg
      181 tccatgcacg agggcaaccg gaaaccgtat tcggcgagcg tcgccttgcg ccggaaatcg
      241 ccgcggtaca tgccgccgag ctgcggaatg gtgacgtgac tttcgtcgac aaagacgagt
      301 gcgtcgtcgg gcacatactc gaacaatgta ggcggcggct cgcccggctt gcggccggtg
      361 agatatcgcg aatagttttc gatgcctgcg cagctgcccg ttgcctccat catttcgaga
      421 tcgaaggtcg tgcgttgctc gagccgttgc gcctccagaa ggcgccccgc ggcattgagc
      481 tggtctaggc gctcacgcat ctcctgcttg atgccggcaa tcgcctgcag cagcgtgggc
      541 cgcggcgtta cgtagtggga attggcgtag attttcacaa agtcgagctc gtcggtcttc
      601 tgaccggtga gggggtccat ctcctcgatc ttctcgattt cgtcgccgaa gaggtgaatt
      661 cgccaggcgc gatcctcgta gtgagccggg aaaatatcga ccgtatcgcc gcgcacgcgg
      721 aacgagccgc gatagaaatc gccttgcgta cgcttgtatt gcagcgcgac caggtcggcg
      781 aggagctggc gctgattaat cttgccgccc tgcttcaacg tgaaggtcat tgccgaatag
      841 gtttccaccg agccgatgcc gtaaatgcac gacaccgagg caacgatcac cacgtcgtcg
      901 cgttcgagca gcgcccgcgt cgccgagtga cgcatgcgat cgatctgctc gttgatggtg
      961 gattcttttt cgatataggt atcggtgcgc ggaacgtagg cttcgggttg gtagtaatcg
     1021 tagtaggaaa cgaaatactc gacggcgtta tcagggaaaa acgatttgaa ctcgccataa
     1081 agctgcgccg ccagcgtttt gttaggcgca agaataaggg cagggcgctg cgtcgcctcg
     1141 atcactttag ccatcgtgaa ggtcttgccc gagccggtaa cgccaagaag cacctgggtg
     1201 cgatcagtgc gcttgacgcc cgctaccagc tcctcgatcg cctgcggttg gtcgcccttc
     1261 ggctcgaagt ccgaagcgat gacaagtttc ttgccgccct cggatttctc cgggcgcggc
     1321 gggcgatgtg gggtccaggg cgttgtggtg aattcaggcc gtccttcgcg caatagccgt
     1381 tcaagagact gctggctggc aatcccggca aaaccgccag gctgcgtggg cagatcggcc
     1441 cgcgggagac gatatttcgg atcgtccttt ttcagagcgg gcggaagtgc tgcttcttcg
     1501 tcgccaaggc ccagctcgtt cgccagctgc gggtcaaggc cggtgatcgg agaagcggcg
     1561 taatcgcgct gctgggaatc gttgaattct cggggcgtcg atttccgcgc cctgtgcgcc
     1621 tcggaaaaat cgcgacggcg atcccacgaa ttgtcaggcg gtggctgtag tcccgtcccg
     1681 gaacccctac cggctgtgcc gcggccgatg ccgggattga gcacgtccgc aagttcgtcc
     1741 ggggtcgtcg gctcatccgg ccgcgcggcc ttggcgcgcg ttggccgcgc cggatccttt
     1801 ttccgcaaat ttctgggctt gtcggggagt ttcgccattg ctccgaatat ggggcgagtc
     1861 cgcgggcgag gaaagggcgg taccttcgcc caatcgcagt gctagattga ccttaagaaa
     1921 aacgggagga agggatggcg gaaatcaatc ttacgcggcg cctattgctt gcagcattgg
     1981 gaaccgcacc ttttgcgcat tcggccggcg cgcaagccgc ctggcccaat cggcctgtgc
     2041 gcgtcatggt accctatcca cccgcgggcg gagccgacac cactgcgcgc att
//
LOCUS       DATDHO010000259         1757 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_60004, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000259 DATDHO010000000
VERSION     DATDHO010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1757
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60004"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..873)
                     /locus_tag="VIY07_05070"
     CDS             complement(<1..873)
                     /locus_tag="VIY07_05070"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HEY6381156.1"
                     /translation="MTVLRSVVLGCGSYLPSRIVSNDELARSVETTDEWIVQRTGIRE
                     RHIAAPGELTSDLALNAARAALANAHVEANSIDLIVLGTSTPDQTFPATAVSVQCGLG
                     ITHGAAFDLQAVCSGFVYALQVTDALLRGGTYKRALVIGAETFSRILDWNDRTTCVLF
                     GDGAGALVLEAQPQTGTREDRGILTTHLRSDGRHKGKLYVDGGPSSTQTVGRLRMEGR
                     EVFKHAVAMITDVIEDAFKATGYSAADIDWFVPHQANKRIIDGSAHKLGIAPEKVVVT
                     VDRHGNTSAASIPLA"
     gene            complement(870..>1757)
                     /gene="plsX"
                     /locus_tag="VIY07_05075"
     CDS             complement(870..>1757)
                     /gene="plsX"
                     /locus_tag="VIY07_05075"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEY6381157.1"
                     /translation="KSKLVHTDVSIRMDDKPSQALRYGRWKSSMWLAIDAVKKHEADV
                     AVSAGNTGALMAMARFNLKMKEGIERPAIAALWPTLKGESVVLDVGASIGADEAHLVN
                     LAAMGSAMARVLFDIERPTVGLLNIGVEEVKGLEQVREAGRILREGQFPHFDYHGFVE
                     GDDIGKGSVDVVVTEGFAGNIALKTAEGTAHQLASYLRSAMNRTLTARLGYLLARQAF
                     RTVREKMDPRKANGGVFLGLNGVVIKSHGGADAEGTAAAIDMGYDMVRYELLAKIGQS
                     MARDLKAGNTALLATGAGS"
BASE COUNT          343 a          582 c          497 g          335 t
ORIGIN      
        1 agccagcggg attgaggccg cagacgtgtt cccgtggcgg tccacggtga ccacgacttt
       61 ttcgggggca atgcccaact tgtgggcgga cccgtcgatg atccgcttgt tggcctgatg
      121 tggcacgaac cagtcgatat cggcagccga atagccggtt gccttgaacg catcctctat
      181 cacgtctgtg atcatcgcta ctgcgtgctt gaaaacctcg cgtccctcca ttcggagacg
      241 gccgacggtt tgggtcgagg acggaccacc gtccacgtaa agcttcccct tgtgtcggcc
      301 atccgaacgg aggtgagtgg tcaggatccc acgatcttcc cgagtgcctg tctgcggctg
      361 tgcctcaagg acgagggcgc cggcgccgtc gccgaagagg acacaggtcg tgcggtcgtt
      421 ccagtcgagg atgcgagaaa acgtctcggc tccgatcaca agggcacgct tgtatgtgcc
      481 accccgcaac aatgcatccg tcacctgcag cgcatagaca aacccggaac acaccgcctg
      541 caaatcgaag gcggcgccat gcgtaatgcc gagcccgcac tgaacggaga cggccgtcgc
      601 aggaaaagtc tgatcgggcg tcgaggtccc cagtacgatc aggtcgatcg aatttgcctc
      661 gacatgcgcg ttggcgagcg ccgcccgcgc cgcgttcagc gcaagatcgg aggtaagctc
      721 gcctggcgca gcaatgtgcc gctcgcgaat gcccgtacgc tgcacgatcc actcatcggt
      781 ggtttcgact gagcgggcca actcatcgtt gctcacaatg cgcgacggca gatagctgcc
      841 acatccgagc acgaccgaac gcagcactgt cacgagcctg ctccggtcgc cagaagagcg
      901 gtgttgcccg ctttcaagtc gcgtgccatc gactggccaa tcttggcgag caattcataa
      961 cgcaccatgt cgtagcccat gtcgatcgcc gccgcagtgc cttcagcgtc ggcgccgcca
     1021 tggcttttga tcacaacgcc attgagcccc aggaaaacac cgccattggc cttgcgcgga
     1081 tccatcttct ctctcaccgt tcggaacgcc tgccgcgcga gcaaatagcc aagtcgcgcg
     1141 gtcaacgtcc gattcatggc cgagcgcaag taagaagcaa gctgatgcgc ggtgccctcc
     1201 gccgtcttga gcgcgatgtt gcccgcgaac ccttcggtca cgacaacgtc aaccgaacct
     1261 ttgccgatgt catccccctc gacaaagccg tgatagtcga aatgcgggaa ttgcccctcg
     1321 cgcaggatgc gcccggcctc ccgcacctgc tctaaccctt tgacttcttc aacgccaatg
     1381 ttgagcagcc ccaccgtcgg ccgttcgata tcgaacaaca cgcgggccat ggcgctgccc
     1441 atggccgcga gattaacgag atgcgcctcg tcggcgccga tcgaagcgcc gacgtcgagc
     1501 accacggatt ctcccttcag cgtgggccac aacgcggcaa ttgccggacg ctcgatccct
     1561 tccttcatct tgagattgaa gcgcgccatc gccatcagcg cgccggtgtt tccagccgag
     1621 accgcgacat cggcctcatg cttcttgacc gcgtcgatgg ccaaccacat tgacgacttc
     1681 cagcgtccgt aacgcagcgc ctgactcggc ttgtcgtcca tacgtatcga tacatctgtg
     1741 tgtacgagtt tcgattt
//
LOCUS       DATDHO010000260         2841 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_12173, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000260 DATDHO010000000
VERSION     DATDHO010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_12173"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1132)
                     /locus_tag="VIY07_05080"
     CDS             complement(<1..1132)
                     /locus_tag="VIY07_05080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate transporter"
                     /protein_id="HEY6381158.1"
                     /translation="MAEPILLFGIPIDFVLFGLTLLGIALFHRHTLPIAIAGLAVITA
                     YKLIFTGFKDGAGLTGLGLHFTHEFSLLANLFLLLMGFALLSRHFEESAIPDAMPALL
                     PDDWKGGVVLLAIVFVLSSFLDNIAAAIIGGTVARYVFGGKVHIGYLAAIVAASNAGG
                     SGSVVGDTTTTMMWVSGVSPLSVLEAYVAAIVAFVIFAVPASLQQERHSPIVKHARRG
                     IEIDWMRVFIVAAMLIVALLVNVVTNLHFPELLARVPILGLSVWAVLFATSPLRRPDW
                     KVLPETFKGTIFLLALVTAASMMPVEELPAASWRTALGLGFVSAVFDNIPLTALALKQ
                     GGYDWGYLAYAVGFGGSMIWFGSSAGVALSNQYSEAKSVGLWL"
     gene            complement(1264..2040)
                     /locus_tag="VIY07_05085"
     CDS             complement(1264..2040)
                     /locus_tag="VIY07_05085"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY6381159.1"
                     /translation="MDTPLLWQIPLSHYSEKVRWALDYKCIAHRRRVLGPDYLIRVWR
                     ATGQGKLPVLWLDGRAIADSTLIINALEEHYPEPPLYPRDTATRQRALALEDDLDETL
                     GPALRAATVTPLFRNDPDIALRVLTTGMGGKAYRTLQPVRRIFPSFYRLRHRISESNL
                     EKDRAIVAAALDRIEHERQGRAYLVGEAFTIADLTAAALLGVLLQPPEIQYPLQVELP
                     MYLKDYRTMLMRHPAAHWAVGIYRLHRGYSAEVAKHMSAP"
     gene            complement(2145..>2841)
                     /locus_tag="VIY07_05090"
     CDS             complement(2145..>2841)
                     /locus_tag="VIY07_05090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381160.1"
                     /translation="VLNYYRVRQLSFYPQNHEVTGCACRLGPACYDRSMLEQFVQYVR
                     GEVRLLAEAPLVFGAALLFLGAIIWAALRWRYSAIIDHRNRIIALYKARLDGATPDQA
                     KAKMDSLEGQVVSLKNREWPKLTPAAVTDFENILVSQGTHVVSVVSQDRDAVFLARDL
                     VDAFKRIGWKARRDANMSDLPDGLSVWPEDDVARAICNALTMATGALVTLRNDQQLKD
                     QGTYAIGIGYKLD"
BASE COUNT          678 a          819 c          819 g          525 t
ORIGIN      
        1 gaagccagag accgaccgac tttgcctccg aatactggtt tgacaaggct accccggctg
       61 aagaaccgaa ccagatcatt gagccgccga atccaaccgc gtaggcaaga tagccccagt
      121 cataaccacc ctgtttaagc gccagagcgg taagaggtat gttgtcgaat acggcggaca
      181 cgaagcccag acccagcgcg gtgcgccatg atgcagccgg cagctcctca acaggcatca
      241 ttgaagctgc cgtaacgagg gcgagcagaa aaatcgttcc tttgaaggtt tctggcagca
      301 ctttccaatc cggccgccgc aatggtgacg ttgcaaatag aaccgcccag accgacaaac
      361 ccagtattgg cacgcgggca agcagttcgg gaaagtgcag gttggtgaca acgttcacca
      421 agagcgcgac aatcaacatg gctgcaacga taaatactcg catccagtcg atttcgatac
      481 cgcggcgcgc gtgtttgacg atgggcgaat ggcgttcctg ttgcaaggat gcaggcacgg
      541 cgaagatcac aaacgcaacg atcgcggcaa cgtaggcttc gagcacactg agcgggctta
      601 cccccgaaac ccacatcatc gtcgttgtcg tgtctccgac aacgctgccg gacccgccgg
      661 catttgacgc ggcaacaatc gcggcgaggt aaccgatatg gacttttccg ccaaatacgt
      721 agcgcgcgac ggtgccgcca atgatcgccg cagcaatatt gtcgagaaag ctcgacagca
      781 cgaacacgat ggcgagcagg actacgccgc ccttccaatc atcgggcagc agcgcaggca
      841 tcgcatccgg gatagcgctc tcctcaaagt gacgcgacaa cagcgcgaat cccatcagta
      901 aaagaaaaag gttagcgagc agcgaaaatt cgtgagtgaa atgcaggccg aggccagtca
      961 aaccagcgcc gtctttaaag ccggtgaaaa tcaacttgta agcggtgatg acggcaagac
     1021 ccgcaatagc aatgggcagg gtatggcgat gaaacaacgc aatgccgagc aaggtcagcc
     1081 caaacaagac gaagtcgatt ggaattccaa agagcaagat tggctcagcc aacgcagcct
     1141 cgaaaatgct tcctgaggga ccccaacttt cgactgctac tgatacaaca aatcaacctt
     1201 ggggttggag gcaaatagcc gcgttagggg gtcggaaagg aagaaaaacc aagttctcag
     1261 gtgctatggc gcagacatgt gctttgcgac ttccgcggag tatccgcgat ggagacgata
     1321 gatgccgacc gcccaatggg ctgccggatg ccgcatcaac atggtgcggt agtctttcag
     1381 atacatcggc agctccacct gcagagggta ctgaatctca ggaggttgca ggagcacccc
     1441 cagcagcgcg gcagccgtga ggtctgcgat ggtgaaagct tccccaacga gataggcgcg
     1501 accttgccgc tcgtgctcga tgcggtcgag cgctgccgcg acgattgctc gatccttctc
     1561 caaattgctt tcgctaattc tatggcggag tcggtaaaac gatggaaaaa tccggcgcac
     1621 gggctgcagc gtgcggtagg ccttgccgcc catgcccgtt gtcagcacgc gcagcgcaat
     1681 gtccggatcg ttccggaaca acggcgtcac ggtagccgca cgcagcgccg ggccaagcgt
     1741 ctcgtcgaga tcgtcctcaa gtgcgagcgc gcgctgccgc gttgcggtat cgcgcggata
     1801 aagcggcggc tcggggtaat gctcctcaag cgcattgatg atgagcgtgg aatcggcgat
     1861 ggcccggcca tcgagccaca ggacgggcag cttgccctgg cccgtcgcgc gccaaacgcg
     1921 gatcaggtag tcgggaccta gcacgcggcg ccggtgcgcg atgcatttgt aatcgagtgc
     1981 ccaacgcacc ttttcgctat agtgggagag cgggatctgc cagagcagcg gggtgtccat
     2041 ggcgacctag ttcacgtcaa cgatgacgcc caagcttcta ttaaatccta cgccacaaag
     2101 gccgtcgcca cctttgcaga acgactagta cgggcgacgc gccgtcagtc cagcttgtag
     2161 cctatgccaa tggcataggt gccctggtcc ttgagctgct ggtcatttct tagtgttacg
     2221 agcgcgccag tggccatcgt cagcgcgttg catatggcgc gagccacatc gtcttccggc
     2281 cagacgctca atccgtcggg gaggtcactc atgttcgcat cgcgccttgc tttccaccct
     2341 atccgcttga acgcgtcgac taggtcgcga gccaaaaaga ccgcatctct gtcctgtgac
     2401 acaacagaaa cgacatgagt tccttgtgat accaggatat tttcaaaatc tgtcacagca
     2461 gctggcgtaa gtttcggcca ttcgcggttt ttgaggctga ccacttggcc ctcaagactg
     2521 tccatctttg ccttggcttg atccggcgtc gcgccgtcta gtcgcgcttt gtagagcgcg
     2581 atgatacgat tcctgtggtc aatgattgcc gaatagcgcc atctcagcgc cgcccagatt
     2641 atggcgccca ggaacaagag cgccgcgcca aagaccagcg gagcctcggc gagcaagcgg
     2701 acctcaccac ggacatattg aacgaattgc tcaagcatcg agcgatcgta acaggcaggg
     2761 ccgagtcgac atgcgcagcc ggttacctca tggttttgag ggtagaaaga caattgccgg
     2821 acacggtaat agttcagcac a
//
LOCUS       DATDHO010000261         4554 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_111410, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000261 DATDHO010000000
VERSION     DATDHO010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4554
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_111410"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..802
                     /gene="accD"
                     /locus_tag="VIY07_05095"
     CDS             <1..802
                     /gene="accD"
                     /locus_tag="VIY07_05095"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HEY6381161.1"
                     /translation="TGQLVFYKDVEANQFVIPSSNYHMRISAPLRLKSMFDDGDFEDV
                     PLADVAADPLKFRDERRYADRLKDARTKTGLQDAVKLGIGRLEGQMVTIAVQDFDFMG
                     GSLGMAAGEAVITGLETAVHRQTPFIMFAASGGARMQEGILSLMQLPRTTVGVQMLRE
                     ARKPYIVVLTNPTTGGVTASYAMLGDVQIAEPGALIGFAGPRVIEQTIREKLPEGFQR
                     AEYLAEHGMVDMVVHRHKLRSTLAELCRLLTRAPAAPEQQQLPVPAHA"
     gene            916..2235
                     /locus_tag="VIY07_05100"
     CDS             916..2235
                     /locus_tag="VIY07_05100"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008841 - dihydrofolate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="folylpolyglutamate synthase/dihydrofolate
                     synthase family protein"
                     /protein_id="HEY6381162.1"
                     /translation="MNHINNIVARLTALHPRRIDLSLDRLQRLLAVIGHPERKLPPVI
                     HVAGTNGKGSTIAFLRAILEAAGKLVHVYTSPHLVRFNERFRIGRAGESRLVTDEELV
                     ATMEECERANSGAAITVFEITTAVGLLLFSRHPADVLLLEVGLGGRLDATNVIDNPLT
                     TIITRISVDHSDFLGSSVEKIAAEKAGILKRGVPAVIASQPRDALAVIERQAARLAAP
                     LKIAGADWTATEERGRLVYQDENGLLDLPAPKLYGRHQFENAGLAIAALRATPQFAVS
                     PAAYDVGMVKTDWPARMQRLAHGRLVELAPVGSELWLDGGHNPDGGRAIAAALADLEE
                     RVPRPLVLIVGMLASKDCKGFLSNFAGLARRMIAVPIPNAETGMSAEAVAGIARDIGL
                     SATSRDDLFEALEAVRKLDLDPPPRIVVTGSLYLAGEALRQNGTVPQ"
     gene            complement(2268..3299)
                     /locus_tag="VIY07_05105"
     CDS             complement(2268..3299)
                     /locus_tag="VIY07_05105"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF006078.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
                     /protein_id="HEY6381163.1"
                     /translation="MTLSLRHPFPPMEAMSVDEVPEGKNWQYEPKWDGFRCLIFRDGE
                     KVDLQSKSEQSLTRYFPELVEAVRSLKARQFVLDGEIVVPRGRAFSFDDLLQRIHPAT
                     SRVKRLAAETPALLIVFDLLVDADRTLLTKMPLSKRRTLLERFARKYLPGNKPIRLSP
                     MTTRLADARKWLKQVGATLDGIIAKRRDAFYESGNRHGMQKIKNYRAADCVVGGFRYN
                     EGKKTVGSLLLGLYDDRRLLNHVGFTSSLKSEEKKSLTKKLEKMIAPPGFTGAKPGGP
                     SRWSTKRSGEWQPLKPKLVVEVCYDHFSGERFRHGTRLVRWRPDKAPRQCTLDQVQQK
                     KADLMKLLK"
     gene            complement(3362..3682)
                     /gene="trxA"
                     /locus_tag="VIY07_05110"
     CDS             complement(3362..3682)
                     /gene="trxA"
                     /locus_tag="VIY07_05110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEY6381164.1"
                     /translation="MAVGKVSDASFESDVLKSAEPVVVDFWAEWCGPCRMIGPALEEI
                     AGQLGDKVKIVKLNVDENPKTAGQYGIMSIPTLMLFKNGKEAARQVGAAPKQKLHQWI
                     SAAV"
     gene            complement(3776..>4554)
                     /locus_tag="VIY07_05115"
     CDS             complement(3776..>4554)
                     /locus_tag="VIY07_05115"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEY6381165.1"
                     /translation="HDLVLSALQPLSEEGRDDDGRLWRFRKGLPVTADQPDQTPQPRA
                     ELPAWLTTYASASPRRVRILRPSDAPEEEDVSPAGRGVDREAARLRGRLAHRLLQSLP
                     DIPAARRRKAADDYLARSGRAMAKDERAQLAERIVALLDDARFRAVFSADSRAEVPIA
                     GTLDGGLEIVRVSGQIDRLAITPDAVLIADFKTNTDPPRRFVEVPDAYKRQLALYRAV
                     LQKMYPGRPVRAALIWTEVPDLMELSAEVLDEALRRVTSP"
BASE COUNT          849 a         1359 c         1410 g          936 t
ORIGIN      
        1 aactggacag ctggtctttt acaaggacgt cgaagcgaac caattcgtca ttcccagctc
       61 aaactatcat atgcgcatca gcgcgccgct gcgcctgaag tccatgttcg acgacgggga
      121 cttcgaggac gttccgctgg cggatgtggc ggccgatcct ctcaagtttc gcgacgagcg
      181 tcgttacgcc gatcgtctga aagacgcccg caccaagacc ggattgcagg acgccgtgaa
      241 gctcggcatc ggtcgcctcg aaggtcagat ggtcacgatc gccgttcagg attttgactt
      301 catgggcggc tcgctgggca tggctgccgg cgaggccgtg atcaccggtc tcgagacggc
      361 cgtacacagg cagacgccat tcatcatgtt cgccgcctcg ggcggtgcac gcatgcagga
      421 aggcattctt tcgctcatgc agctgccgcg cacgacggtt ggggtgcaga tgctgcgcga
      481 agcgcgcaag ccctacattg tcgtgctcac caatcccacc acgggcggcg ttacggcctc
      541 gtacgccatg cttggcgatg tacagatagc cgagcctggc gcgctgatcg gttttgccgg
      601 cccgcgcgtg atcgagcaga ccatccgcga gaaattgccg gagggtttcc agcgcgctga
      661 gtatctcgcg gagcatggca tggtcgacat ggtggtgcat cggcataaat tgcgctcgac
      721 gctcgctgaa ttgtgccggc tgctgacgag ggccccggct gcgcccgagc agcaacaatt
      781 accggttccc gcgcatgcct gaacgtcgtc gggcatcatc gccgcgaaag cggatgatcc
      841 gataggcccg gtgttctaaa atagaattga caggaatggt ggtgtccgct ttcagcgggc
      901 acgacgaaaa attgcatgaa tcacatcaac aatatcgtcg cgcgtttgac tgcccttcat
      961 cccaggcgca tcgatctttc gctcgatcgc ctgcaaagac tgctcgccgt gatcggtcat
     1021 ccggagcgaa agctgccgcc ggtgatccat gttgctggca cgaacggcaa gggctccacg
     1081 attgcgttct tgcgcgcgat cctggaggcc gcgggcaaac tggtacacgt ctacacgtcg
     1141 cctcatctgg tccggttcaa cgaacgcttt cggatcggtc gggcgggtga aagccggctc
     1201 gtcacggacg aagaattggt cgcgacgatg gaagagtgcg agcgtgcgaa ttcgggcgcg
     1261 gcgattacag ttttcgaaat taccaccgcg gttggcctct tgctgttttc tcgccaccct
     1321 gcggatgtgc tgttgctgga ggttggtctc ggcggccggc tcgatgcaac gaatgtgatc
     1381 gacaatccgt tgaccacgat catcacgcgt atctcggtgg accacagcga cttcctcggc
     1441 agttctgttg agaagatcgc cgctgaaaaa gcaggtatac tcaagcgcgg cgtgcctgcg
     1501 gttattgcgt cgcagccgcg cgacgcattg gccgtgatcg aacggcaagc cgccaggctg
     1561 gctgcgccgc tgaaaattgc cggcgctgac tggaccgcca ctgaggagcg cggacgcctc
     1621 gtctaccagg atgaaaatgg gttgctcgat ctgcccgcgc caaagcttta cggcaggcac
     1681 cagttcgaga atgccggtct tgcaatcgct gcgcttcgcg cgaccccgca attcgcggta
     1741 tctccggccg catatgacgt cgggatggtc aagactgact ggccggcgcg aatgcaacgg
     1801 ctggcacatg gccgacttgt ggagcttgcg cctgttggca gcgagctctg gctggatggt
     1861 gggcacaatc cggatggagg acgagcaatt gcggcggcgt tggcggatct tgaagagcgc
     1921 gtgccgaggc cgctggtcct gatcgttgga atgcttgcca gcaaggactg caagggcttt
     1981 ctgagcaatt tcgccggcct tgcccgccgt atgatcgccg taccgatccc aaacgccgaa
     2041 acaggaatga gcgcggaagc agtggctgga atagcgcgcg atatcggatt gtccgcgaca
     2101 agtcgcgacg acctgttcga agcgctcgag gccgtacgca agctcgatct cgatccgccg
     2161 cctcgcatcg tggtcaccgg gtcgctttat cttgccggtg aagccctgcg ccagaacggg
     2221 acggtgccgc aataggctct caagcgaagt tctcagatcg ccccgagcta cttcagcaac
     2281 ttcatgagat cggctttctt ctgctgcacc tgatccagtg tgcattggcg cggcgccttg
     2341 tcaggtcgcc agcgcacgag acgcgtgccg tgccggaagc gctcgccgct gaaatggtca
     2401 tagcacacct ccaccaccag ctttggcttg agcggctgcc attcgcctga gcgttttgtc
     2461 gaccagcggc ttgggcctcc cggctttgcg ccggtgaagc cgggtggcgc gatcattttt
     2521 tcaagttttt tcgtgagcga ttttttctcc tcgcttttca gcgaggaggt gaatccaacg
     2581 tgattaagga ggcgccggtc gtcatatagt ccgagcagga gggagccgac ggttttcttt
     2641 ccttcattgt agcggaaccc acccaccacg cagtccgccg cgcggtagtt cttgatcttc
     2701 tgcatgccgt ggcgattgcc ggattcgtaa aacgcgtcgc ggcgcttggc gatgatgcca
     2761 tcgagcgttg ccccgacctg cttgagccac tttctcgcat cggcgagcct agtggtcatc
     2821 ggggacagcc ggatgggttt gttcccaggc agatattttc gcgcgaagcg ttcgagcaat
     2881 gtgcgccttt tactgagcgg catcttggtg aggagcgttc ggtcagcatc taccagcagg
     2941 tcgaagacga tcagcagcgc cggcgtttcg gcagcgaggc gtttcacacg gctcgtggcc
     3001 gggtgaatac gctgcagcag gtcgtcgaag gaaaatgccc ggccgcgcgg aacaacaatt
     3061 tcaccgtcga gcacgaattg tctggccttg agcgagcgaa cggcctccac gagctcgggg
     3121 aaatagcgcg taagcgattg ctcggatttt gattgcaggt cgactttttc tccgtcgcga
     3181 aaaatcaggc aacggaagcc gtcccatttg ggttcgtatt gccaattctt gccctccggg
     3241 acttcgtcca cggacattgc ctccatcggc gggaacggat ggcgcaggct gagggtcatc
     3301 tatcgctaaa cgcaaaacgg ccggctttgg ccggccgttg aacataaact ttgttgtccc
     3361 gctagacagc agcgctgatc cattgatgca gcttctgttt tggcgcggca ccgacctggc
     3421 gcgcggcctc cttgccattt ttgaacagca tcagggtggg aatagacata atgccgtatt
     3481 gaccggcggt ctttggattc tcgtcaacgt tcagcttgac gattttcacc ttatcgccga
     3541 gctgaccggc gatttcctcg agcgcgggcc ctatcatgcg gcacgggccg caccattcgg
     3601 cccagaaatc cacaaccacc ggttcggcag atttcaaaac gtccgattca aagcttgcgt
     3661 ccgacacttt gccgacggcc atggcagcta cctcttgtgt tgagcggagc gaatctgccc
     3721 caaaaattgc gagggctgga aactatgaac gcggtcccgc agcgtcaagg cgctctcacg
     3781 gggaggtgac ccgccgcagc gcttcatcaa ggacctcggc agaaagttcc atgagatcag
     3841 gtacttccgt ccaaatcagc gcggcgcgaa ccggccgacc tgggtacatc ttttgcagca
     3901 cggcgcggta aagcgcgagc tgtcgtttgt atgcgtccgg cacctcgacg aatcgccgcg
     3961 gcggatctgt attggtcttg aaatcggcaa tcaggactgc gtctggcgta atggccagac
     4021 gatcaatttg gcccgaaacg cgcacgattt cgaggcctcc atcgagcgta ccagcaatag
     4081 gaacttcagc gcggctgtct gcggaaaaca ctgcgcggaa gcgcgcgtcg tcgagcagcg
     4141 ccacgatccg ctctgccagt tgggcgcgct cgtctttggc catcgcgcgg ccgctccgtg
     4201 ccagataatc gtcagcggcc tttcgcctcc gtgcggcggg aatatccggc agcgactgca
     4261 acagccggtg ggcgagcctc ccacgcaggc gggcggcctc gcggtctacg ccgcgcccgg
     4321 cagggctgac gtcctcctcc tcgggcgcat cggatggccg caggatcctc acccgccgtg
     4381 gcgaagctga tgcatacgtc gtgagccacg caggaagctc ggcgcgtggc tgcggcgtct
     4441 gatcaggctg atctgcggtg accggtagac ctttgcggaa gcgccagagc ctgccgtcgt
     4501 cgtcgcggcc ttcttccgac agtggctgca gcgcgctgag cacgaggtca tgcc
//
LOCUS       DATDHO010000262         6316 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_210377, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000262 DATDHO010000000
VERSION     DATDHO010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6316
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210377"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..481
                     /gene="otsB"
                     /locus_tag="VIY07_05120"
     CDS             <1..481
                     /gene="otsB"
                     /locus_tag="VIY07_05120"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: protein motif:HMM:NF014418.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HEY6381166.1"
                     /translation="LFFWAKPLPEDLRRCLAEGAALGPGVVVEDKGYSLALHYRKAPQ
                     LAERLRRHVAGCRAAFPGEPTELLLGKAVFEVKRPGIDKGEAIRKLMAHAPFAGRIPV
                     FIGDDITDESVFRVLPEIGGKGFSVHRYFPGLAGIFTNPAQVRDALSMLAANGQAAA"
     gene            478..2274
                     /locus_tag="VIY07_05125"
     CDS             478..2274
                     /locus_tag="VIY07_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HEY6381167.1"
                     /translation="MTDYGLDLAVIGNGRTAALVNPSSRIVWWCLPRYDGDPVFCRLV
                     AGSEEKGFTDVVLEGQVETRSEYVRNTAIVVTELIDDKGNAVRITDFAPRFHAYGRTF
                     RPPQLMRIIEPIKGMPRITIRFRVTHRYGEPVVSRSSGSNHIRYWRDEVPVRLTTDAP
                     LSYVENEASFVLTRLVHMVFGTDEPFEGPLEGTCRDFCERTRDYWIEWVRRLAFSIDW
                     QDEIIRAGITLKLSSYEETGAIVAALTTSIPEMPHSGRNWDYRFCWMRDAFFVVRALN
                     RIGATRTMEDFISYILSVAGGRSEPVRPLYGVVHTDLLEERTAPALAGYRGDGPVRIG
                     NAAGKQSQNDVYGSIILAATPMFFDRRLPRPGDTALFHTIEPLGEQAARLAFEPDSGI
                     WEYRGRKRVHTHSAAMCWAGCQRLQAIATHLKLPERANYWGGIAARIGEEVLKRAWNP
                     KRKSFSAAFDGDDLDASALLLAELGLVAPDDPRYVATVDAIAHELRRGSHVMRYVAAD
                     DFGLPEAAFLICRFWLIDAMWEIGRREEALDMFVDALRIRNRYGLLSEDVHPVTGELW
                     GNFPQTYSLSGLTLTAIKLSRSWGDRYWRGSS"
     gene            2256..3671
                     /gene="otsA"
                     /locus_tag="VIY07_05130"
     CDS             2256..3671
                     /gene="otsA"
                     /locus_tag="VIY07_05130"
                     /EC_number="2.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016734898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003825 - alpha,alpha-trehalose-phosphate
                     synthase (UDP-forming) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase
                     (UDP-forming)"
                     /protein_id="HEY6381168.1"
                     /translation="MARLVVVSNRVGIPDRGARAGGLEVAIRPALKRNGGLWFGWSGR
                     VAEDMPRTTKSVVHDNISYATVDLSKDDYQEFYNGFANRVLWPILHYRLDLAEFTRRD
                     LGGYFRVNEYFARHLETLLRPDDVLWVHDYHLIPLAKALRDRGHNNKIGFFIHVPFPP
                     PEILAALPNHDQLIPALCHYDLVGFQTEVDAANFSRYIANECGLPWGGGNSFHFGNRV
                     VHVGTFPVGVEAEAFGRLARRAVETDFVREVLDSLSGRAMIIGVDRLDYSKGIPERMS
                     AFERFLANFPDWRGKVTYLQITPRSRTGIPEYADMGRAVGEAVGRINGAYGEASWTPV
                     RYINKAHSRTALAGLYRAARAGLVTPLRDGMNLVAKEYVAAQNPDDPGVLILSRFAGA
                     AHECAAALLVNPYDPEGVGNAINRALSMPLEERRGRHADTFKVLVRNDLGHWAERFLR
                     ALTQPTAPTDARTLVRVASGR"
     gene            complement(3714..5663)
                     /gene="thrS"
                     /locus_tag="VIY07_05135"
     CDS             complement(3714..5663)
                     /gene="thrS"
                     /locus_tag="VIY07_05135"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEY6381169.1"
                     /translation="MVALTFPDGARREYPPGTTGFDVAKGISPSLAKRTVAMALDGAL
                     ADLSDPIDRDAGIEFISREDPRALELIRHDAAHVLAEAVQTLWPGTQVTIGPVIENGF
                     YYDFARNQPFTLEDLPVIEKKMREIIARDKPFTKEIWSREKAKKIFRDMGEAFKVELI
                     DAIPPDQQIRIYKQGDWLDLCRGPHMTSVGKVGNAFKLMKVAGAYWRGDAKNPMLTRI
                     YGTAFAKQEELDAYLRQIEEAEKRDHRRVGREMDLFHFQEEAPGSVFWHAKGWTLFQA
                     LENYIRRTQTAAGYVEVNSPQLMDKTLWETTGHIPTYSDLIFLTQKREEDERVYAIKP
                     MNCPGHVQIFKNGLRSYRELPVKIAEFGKVHRFEPSGALHGLMRVRAFTQDDAHVFVS
                     ESQIAEEALKMNDLILSIYEDFGFSDVSIKFSDRPDKRIGEDAVWDKAEAALMAALKA
                     SGRPWTLNKGEGAFYGPKLEYVLRDAIGRDWQCGTVQVDFNLPGRLGAFYIDEHSSKV
                     TPVMLHRAMFGSLERFTGILIEHYAGHLPLWLSPVQAVVATITSDADAFARESLETAR
                     KMGLRVEPDLRNEKINYKVREHSLAKVPALLVVGKKEAAERTVSIRRLGKEDQQVMPL
                     DAALKALSEEAVPPDVRRARAAEER"
     gene            complement(5744..6079)
                     /gene="yidD"
                     /locus_tag="VIY07_05140"
     CDS             complement(5744..6079)
                     /gene="yidD"
                     /locus_tag="VIY07_05140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEY6381170.1"
                     /translation="MGTANTWPLTILARLPRLAGRGLVTIYRVTLSPLLGPRCRHLPS
                     CSEYADEAIDRFGLWAGGWMALARVLRCHPWGTSGLDIVPTVLPERSRWFLPWRYGRW
                     RATNDRLQA"
BASE COUNT         1211 a         1873 c         1915 g         1317 t
ORIGIN      
        1 actcttcttt tgggcaaagc cgttgcccga ggacttgcgt cgttgccttg ccgaaggtgc
       61 agcgcttggc ccgggcgttg tcgtcgaaga caaaggctat tcactcgctc tgcactatcg
      121 aaaagctccg cagctggcag aacgtcttcg ccggcatgtc gctggctgtc gcgcggcttt
      181 tccaggcgag ccgaccgaac tgcttctcgg caaggccgta tttgaagtaa agcgcccggg
      241 catcgacaaa ggagaggcca tccgcaagct gatggcccat gcgcccttcg cgggccggat
      301 acccgtattc atcggcgacg acatcaccga tgaatcggta ttccgagtcc tgcccgaaat
      361 cggcggcaag ggcttcagcg tccatcgcta ctttccggga cttgccggca ttttcacaaa
      421 tccggcgcaa gtgcgtgatg ccctgagcat gctggctgca aatggacagg ctgccgcatg
      481 acagattacg gattggatct tgccgtcatt ggcaatggcc gcaccgcggc gctggtcaat
      541 ccttcctctc gaatcgtgtg gtggtgcctg cctcgctacg acggcgatcc ggtgttctgt
      601 cgactggtcg ccggcagcga ggagaagggg ttcacagacg tcgtgctcga gggccaggtc
      661 gaaacgcgct cggagtatgt gagaaacacg gcaatcgtcg taaccgaact gatcgacgac
      721 aagggcaatg cggtccgcat cactgacttt gcgccgcgct tccacgccta tggccgaaca
      781 tttcgtccgc cacagctcat gcggattatt gagccgataa aaggcatgcc gcggattaca
      841 attcgctttc gcgtcacgca tcgttacggc gaacctgtcg tgtcgcgctc ttcaggcagc
      901 aatcatattc gctactggcg cgacgaggtg ccggtcaggc tcactaccga cgcgccgcta
      961 tcctacgtgg aaaatgaggc atcgtttgtg ctcactcgtc tcgtgcacat ggtgttcggc
     1021 accgacgagc cattcgaggg accgctggaa ggcacgtgtc gggatttttg cgagcgcacg
     1081 cgcgactact ggatcgagtg ggtgaggcgg ctcgcgtttt caatcgactg gcaggacgaa
     1141 atcattcgcg cgggaatcac cctcaagctg agcagctatg aagaaacagg ggcgatcgtc
     1201 gcggctttga caacgtcgat tccggaaatg ccgcactccg gacgtaactg ggattatcgg
     1261 ttctgctgga tgcgggacgc attcttcgtc gtgcgggcgc tcaatcgcat tggcgcaaca
     1321 cgcaccatgg aggatttcat ctcgtatatc ttaagcgtcg cgggtgggcg cagcgaaccg
     1381 gtgcgcccgc tttatggcgt cgtgcatacg gatctgctcg aggaaagaac tgcaccggct
     1441 cttgccggat atcgtggcga cggtccggta aggatcggaa atgcggccgg taagcagagc
     1501 cagaacgacg tttatggcag cattatcctt gcagcgacgc cgatgttctt cgaccggagg
     1561 ctgcctcgcc cgggcgacac ggcgctgttt catacgatcg agccgctcgg cgaacaggct
     1621 gcaagactcg ccttcgagcc ggactccggc atctgggaat atcgggggcg taaacgcgtc
     1681 catacccatt ctgcggcaat gtgctgggcg ggatgccagc ggcttcaggc gatcgcgacc
     1741 cacctaaagt tgcccgaacg tgcaaactac tggggcggaa ttgccgcccg gatcggggag
     1801 gaagtgctca agcgcgcatg gaatcccaag cgaaagtcgt tttctgccgc ttttgacggc
     1861 gacgacctcg atgccagtgc gctattgttg gctgagctcg ggttggttgc gccggacgat
     1921 ccccgttatg tggcgaccgt cgatgcgatc gctcacgaac ttcgccgcgg ctcccacgtt
     1981 atgaggtatg tcgctgccga cgatttcggc ctgccagagg cggccttctt gatttgccgg
     2041 ttttggctaa tcgatgcaat gtgggagatt ggacggcgcg aggaggctct cgacatgttc
     2101 gtcgatgcgc ttcgaattcg aaatcgttat ggccttctgt ccgaggatgt ccacccggtg
     2161 acaggagaac tgtgggggaa ttttccgcaa acctactcac tgtcgggact gacgttgacg
     2221 gcaatcaagc tgtcgcgaag ctggggagac cggtattggc gcggctcgtc gtagtctcga
     2281 acagagttgg cattcctgat cgcggcgcgc gagccggtgg gctcgaagtt gcaatcagac
     2341 ctgcgctcaa acgcaacggt gggctgtggt tcggctggag cggtcgcgta gccgaggaca
     2401 tgccgcggac tacaaagtct gtcgtgcacg acaacatttc ctacgcaacg gtggacctga
     2461 gcaaagatga ctatcaggaa ttctataacg gtttcgccaa tcgcgtgctg tggccgatcc
     2521 tgcactaccg gctcgatctt gccgaattca ctcggcgcga ccttggcggc tatttccgtg
     2581 tcaacgaata ttttgccagg catcttgaaa cgctgttgcg tcctgatgac gtgttatggg
     2641 tgcacgacta tcacctaatt ccgctggcaa aggcgctgcg ggatcgcggc cataacaata
     2701 agattgggtt ttttatccac gttccgttcc cgccgccgga aattctcgcc gccctgccca
     2761 atcacgatca gcttattccc gcgctctgcc actacgatct tgtcggattt cagaccgagg
     2821 tcgatgccgc caatttctcg cgctacatcg ccaacgaatg cggcctgcca tggggaggcg
     2881 gcaacagttt tcatttcggc aatcgcgtcg tgcatgtcgg gactttcccc gtcggagtgg
     2941 aagccgaagc cttcggccgc ctggcgcggc gcgctgtcga gacggacttc gtacgcgagg
     3001 tgctggacag cttgtccgga cgggccatga tcatcggggt agaccggctc gactacagca
     3061 agggcattcc cgaacgcatg agcgctttcg aacgcttcct tgccaatttc cccgactggc
     3121 gcggcaaggt cacttatctt cagattacgc cgcgtagccg taccggcatt cccgaatacg
     3181 ccgacatggg gcgcgcggtg ggcgaggcgg tagggcgcat caacggcgcc tacggtgaag
     3241 cctcgtggac ccctgttcgt tacattaaca aagcgcacag ccgcactgcg ctcgcggggc
     3301 tgtatcgagc ggcccgggcc ggcctggtga cgccgttgcg tgacggcatg aatctcgtcg
     3361 cgaaggagta tgtcgctgct caaaatccag atgaccccgg cgtcctgatc ctctctcggt
     3421 ttgccggggc tgcgcacgag tgcgcggccg ccttgctggt caacccgtac gatcccgagg
     3481 gcgtgggcaa cgccatcaac cgcgccctgt ctatgcccct tgaggaacgg cgcgggcgtc
     3541 acgccgacac tttcaaggtg cttgtgcgca atgatctcgg ccattgggcc gagcgtttct
     3601 tgcgcgcgct gacccagccc accgccccaa ccgacgcgcg cacgctggtg cgcgtggcga
     3661 gtggccgctg acgcctccag cgcaacacat tggcttcaat acttgggacg gtgctaccgc
     3721 tcttcggccg cccttgcgcg acgaacatcc ggcgggactg cttcttcgct cagcgccttg
     3781 agtgcggcgt cgagcggcat gacctgctga tcttccttgc caagtcgccg gatcgatacg
     3841 gtgcgttcgg cagcttcctt cttccctacc acgagcagcg cagggacctt ggccagagag
     3901 tgctcgcgca ccttgtagtt gatcttttcg ttgcgcaggt cgggctcaac gcggaggccc
     3961 atttttcggg ccgtctcgag cgactcgcgg gcgaaagcat ctgcgtctga cgtgatggta
     4021 gctacaacgg cctgcacggg tgacagccag agcggcagat gcccggcata gtgttcaatg
     4081 agaatgccgg taaagcgctc gagcgagccg aacatcgcac ggtggagcat caccggcgtg
     4141 accttgcttg aatgctcgtc aatgtaaaaa gcgccaagcc gacccggcaa attgaaatcg
     4201 acctgcacgg tgccgcactg ccagtcacgg ccgattgcat ctcgcaagac gtattcgagc
     4261 tttggtccat agaacgcgcc ttctcccttg ttcagggtcc acggccgacc agatgcctta
     4321 agtgcagcca tcaaggcagc ctcggccttg tcccaaacgg catcctcgcc gatgcgcttg
     4381 tccggccggt cggagaactt gatgctcacg tccgagaagc caaaatcctc ataaattgag
     4441 agaattaaat cgttcatttt gagtgcttct tcagcgatct gggactcgct gacgaataca
     4501 tgcgcgtcgt cctgcgtaaa cgcgcgcacc ctcataagcc cgtgcagcgc gcccgatggt
     4561 tcaaagcggt gcaccttgcc gaattcggcg atcttcaccg gcagctcgcg atagctgcgc
     4621 agcccattct tgaatatctg cacatggccc gggcagttca tcggcttgat ggcgtagacg
     4681 cgctcgtctt cctcgcgctt ctgcgtcaga aaaatcaggt ccgaataggt cggtatatgc
     4741 ccggttgtct cccacagcgt cttgtccatc agctgtggtg agttgacctc gacatagccg
     4801 gccgcggtct gggtgcgacg gatgtaattt tcgagtgcct gaaagagcgt ccaccctttc
     4861 gcgtgccaga agaccgaacc gggcgcttct tcctggaagt gaaacaggtc catttcgcgc
     4921 ccgacacgcc ggtggtcgcg cttctctgcc tcttcgatct gcctcaggta agcatcgagt
     4981 tcttcttgtt tggcgaatgc ggtcccataa atgcgggtaa gcatcgggtt cttggcgtcg
     5041 ccacgccaat aggcgcctgc caccttcatg agcttgaagg cgttgccgac cttgcccacc
     5101 gaagtcatgt gcgggccgcg gcaaagatct aaccagtcgc cttgcttgta gatcctgatc
     5161 tgttggtccg gaggaatggc gtcgatcagt tcaaccttga atgcctcgcc catgtcacgg
     5221 aagatttttt tggccttctc gcgcgaccag atctcttttg tgaatggttt gtcgcgcgcg
     5281 atgatctcgc gcatcttttt ctcgatgacg ggcagatctt ccagcgtgaa cggctggttg
     5341 cgggcaaaat cgtagtagaa cccgttctcg atcaccggcc ctatcgtgac ctgcgtgcct
     5401 ggccagagtg tctgaacggc ttccgccaga acatgggccg cgtcgtgcct gatcagttca
     5461 agcgcgcgcg gatcctcgcg cgaaataaat tcgatcccgg cgtcgcgatc gattgggtcg
     5521 ctcagatcgg cgagggcgcc gtccaacgcc atcgcaacgg tgcgcttcgc cagggagggc
     5581 gagatgccct ttgcgacgtc gaaaccggtt gtgcctgggg ggtattcacg gcgtgcgccg
     5641 tcggggaagg tcagcgcgac catcagcctc tccttgctca ctcgctgcct acgaacgcag
     5701 gtaagcgtgg aactcgatat agcaggcgaa tccgatggcg caactaggct tgcaggcggt
     5761 cattcgtggc gcgccagcgc ccgtaccgcc agggcaggaa ccaccgcgac cgttcgggta
     5821 gcacggtcgg cacgatatcc agtccggacg ttccccaggg gtggcaccgc agaacgcggg
     5881 ccagcgccat ccagccgccg gcccatagtc cgaagcggtc gattgcctcg tcagcatact
     5941 cggaacagct gggaaggtgc ctgcaacgag gcccgagaag aggagagagc gtcacgcggt
     6001 aaatcgtgac cagtccgcgc cccgcaaggc ggggcaagcg ggcgaggatt gtgagcggcc
     6061 atgtgttcgc tgtgcccaaa ttcaagttcc agtggaggat taggacgcgg ggctcgcaca
     6121 aagttccata ggaattggaa caaagactgt ttggatagcg acttttttac actagacccg
     6181 aatctcgcac ctgcactaag aattacctac gccgggggta cgtaccagcg ctgcccaagc
     6241 ccagccagaa cgtggaaatt aagccacgca agaagaaggg ctaaggcggc gagacagggg
     6301 aagaatgacc cgactg
//
LOCUS       DATDHO010000263         3246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_260699, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000263 DATDHO010000000
VERSION     DATDHO010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3246
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260699"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..704)
                     /locus_tag="VIY07_05145"
     CDS             complement(<1..704)
                     /locus_tag="VIY07_05145"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381171.1"
                     /translation="MNRTQRFTLAATGLGLFMIYLDAMIVNVALPAIQSDFKVGESGL
                     QWVVTAYSLGMTIAIMSAGTMADIYGRRKLYLAGIALFTTASAACGMASSLEFLNLAR
                     GIQGIAAATVNVTSLALVSATFPDPKLKSWAIGIWTAIASTALAIGPTLGGFMVQWTS
                     WRSIFMVNVPVGLAGLALTWRFVAESRDERPRTFDIPGQLVFITAVGAFAFAVIEGPR
                     SGWLSGEIITLFVVAGV"
     gene            complement(917..1327)
                     /locus_tag="VIY07_05150"
     CDS             complement(917..1327)
                     /locus_tag="VIY07_05150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381172.1"
                     /translation="MEKETASTMKSDPIIIEQAGMRMTVAHRQGLGGSDEGLTFDITT
                     AGPENEGKRILRFDCFYKNPHYHVGPSGGESAAYKMKDEGIEDSVRWTLEQLKTRFPA
                     MVKQAGYEEIAERIDQHAIADHLTRLEPEILAKY"
     gene            1565..2590
                     /locus_tag="VIY07_05155"
     CDS             1565..2590
                     /locus_tag="VIY07_05155"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381173.1"
                     /translation="MISRSTLWATLAQFVRAYVLLLLTAGVLISTDSSFAADKLRIAY
                     VSPSLSLSLPWVAKEVGMLAKHNLAAEILLITGSPRSVQSLIAGDVDVVFAGVTALTR
                     ARVSGADIAILGAAANLSSQKLMVGRNSKVRRVEDLKGAIIGVSQYGSEADTFTRNAL
                     AMAGLRPDKDVTILQLGGHPQVAAAMVAGKFDVGALAGLAALTVERSGGRLLTSAVEL
                     KILSPSGTFATTRGYIQRNRTVVERLSRSFVEAIHFLKTNRTGSITLLQKYFGGLSAE
                     ETAYLYDDQADLLERLPAPNSKALQAVLERETDPKIKSFAPADFVDASFFREIEKSGL
                     IEQLYRK"
     gene            complement(2827..>3246)
                     /locus_tag="VIY07_05160"
     CDS             complement(2827..>3246)
                     /locus_tag="VIY07_05160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381174.1"
                     /translation="FPIGFMAGSFISGRIGTSRSIEFMTILGGVIGVVNGALLIAWLH
                     FGGVSMAALYIPGMFVSLAQGLSMPYAQAGAMAVDPELAGSASGAVVFSQFFWPAALQ
                     QLTGLLADGTWVPMAAVHFGAVTGALVAAWMAVRAER"
BASE COUNT          661 a          983 c          933 g          669 t
ORIGIN      
        1 acccccgcga ccacgaacag cgtgataatc tcccccgaga gccagccgga ccgcgggcct
       61 tcaatcacgg caaacgcgaa agccccgact gccgttatga acacgagttg cccagggata
      121 tcgaacgtgc gcgggcgttc atcccgcgac tcggccacga atcgccacgt caaggccagc
      181 ccggcgagcc cgacaggaac gttgaccatg aagatcgagc gccagctcgt ccactgcacc
      241 atgaagccgc cgagcgtcgg cccgatcgcg agggccgtgc tcgcgatcgc ggtccatatg
      301 ccgatcgccc agctcttcaa cttcggatcg ggaaacgtgg cgctgacgag cgcgagcgag
      361 gtcacgttga ccgtcgctgc cgcaattcct tggatcccgc gcgctaggtt gagaaattcg
      421 agcgaggacg ccatgccgca ggccgcggag gccgtggtga agagagcgat gccggcaagg
      481 tagagcttgc ggcggccgta gatgtccgcc attgtcccag ccgacatgat ggcgatcgtc
      541 atcccgaggc tgtatgccgt caccacccac tgcaggccgg actcgcccac cttgaagtcc
      601 gattggatgg cgggcaacgc gacgttcacg atcatcgcgt ccagatagat catgaagagg
      661 ccgaggccgg tggccgcaag ggtgaagcgc tgtgttctgt tcatcgcacg ctcaaaagtt
      721 tcttagcgac aacaattgcc gctgtcgatg tgccgtttcg agatggcatc ctaaatcctc
      781 ttagacttcc tggcatctgc actcgactga gcggcttcgg gcagcgcggt gaactcagcg
      841 ccggggatat cgggtcagat ctttttggcc gcctctcgcc tgagaatctt cccggctccc
      901 ggctgcgcca caccaattag tatttagcga gtatttccgg ctctaaccgg gtgagatgat
      961 cggcgattgc atgctggtcg atcctctcgg cgatctcctc gtatccggct tgtttcacca
     1021 tcgcgggaaa ccgagtcttg agctgctcca gagtccagcg aacggagtct tctatgcctt
     1081 cgtccttcat cttgtaagcc gcactttcac cgccggaggg gccaacgtga taatgaggat
     1141 ttttgtagaa gcaatcgaag cgcagaattc tttttccctc gttctctggg ccggcggtcg
     1201 tgatgtcgaa agttagccct tcatcgctgc cgccgaggcc ttgtcggtga gcgacggtca
     1261 tacgcattcc cgcctgctcg ataataatcg gatcgctttt catcgtcgac gctgtttcct
     1321 tttccatcaa ttggcccctc ctgtgatgat agcttcgtcc tggcagactc attacatttt
     1381 actttctacc tgtcaaaccg aactaagagc acgcaaaaga agattatgag agctcttgca
     1441 aaacccgacc tcaaacgatc gacgcgcgtg catttagcat gtaattgacc cattatagct
     1501 tgcaccatca gattcgcgtc ggttataagt tccagagatc gtccgaaagc aagggaggca
     1561 cattgtgatt tctcgatcca ctctttgggc gacgctggct caattcgttc gagcttatgt
     1621 tctccttctt cttactgccg gcgtcttgat ctccactgac agttcctttg ccgccgacaa
     1681 gctgcgcatc gcctacgtta gcccgagcct ttcgctgtcg ctgccgtggg tagccaagga
     1741 agtcgggatg ctcgctaaac ataatttggc cgcggaaatc cttctcatca ccggcagccc
     1801 gcgatcggtc cagtcgttga ttgccggcga cgtggacgtg gttttcgccg gcgtcaccgc
     1861 attgacccgc gcccgcgtga gcggcgccga tatcgcgatc ctcggcgcgg cggcgaatct
     1921 ctcaagccag aagctcatgg tcggccgcaa ttcgaaagtc cgccgtgtgg aagatctgaa
     1981 aggcgcgatt attggcgtct cgcaatacgg ctcggaagcc gacaccttca cccgcaacgc
     2041 gctggcgatg gccggcctga ggcccgacaa agacgtcacg atcttacagc ttggcggcca
     2101 tcctcaagtc gccgccgcga tggtcgcggg caaatttgac gtcggagcgc tggctggcct
     2161 ggccgcgctc acggtggagc gatcaggcgg caggcttctc accagtgctg tcgagctgaa
     2221 gattctttcg ccttcgggca ccttcgccac gactcgcggc tatatccagc gtaatcgaac
     2281 cgtggtcgag aggctgagcc gatccttcgt cgaggcaatc cattttctca agaccaatcg
     2341 cacgggttca attactctgc tgcagaaata tttcggcggc ttgagcgcgg aggaaaccgc
     2401 ctacctttac gacgatcaag ccgacctgtt ggaacgcttg ccagcgccca acagcaaggc
     2461 gctccaggcc gtgctcgaac gcgagaccga tccgaagatc aagagcttcg ccccggcgga
     2521 cttcgtcgat gcgagttttt ttagagagat tgaaaagagc ggcttgattg aacagctgta
     2581 tcggaaatag ctctttgata agccccgact gcgcgagctg ctctgtggtc ctacaggtgc
     2641 gtggttgggg tcaggccttg tattaaaaca tttcgaattt ttgtcggact caccatgtgt
     2701 tcaacgtgag agcgcggtcc tactgtttca gtttggacga attgttcggg attacccacc
     2761 gggcccggca ggaggtgtct gacgagtaac gagagacggt cgcgtaactc catctgttta
     2821 aaagcgctag cgctcagccc gcaccgccat ccaggcggcg accaaggctc cggtcactgc
     2881 gccaaagtgc acggccgcca tcggcaccca ggtcccatcc gcgagcaggc cggtgagctg
     2941 ctgcagcgcg gccggccaga agaactgcga gaacaccact gcgccagagg ccgagcccgc
     3001 aagctcgggg tcgaccgcca tcgcaccggc ttgagcgtag ggcatggaga gaccctgagc
     3061 caggctgacg aacattccag ggatgtagag cgcggccatg gagaccccgc cgaaatggag
     3121 ccaagcgata agcagcgcgc cgttgacgac gccgatcacg ccgcccagga tcgtcatgaa
     3181 ttcaatggaa cggctggtgc cgatgcggcc cgagatgaaa ctcccggcca tgaagccgat
     3241 cggaaa
//
LOCUS       DATDHO010000264         1626 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_309719, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000264 DATDHO010000000
VERSION     DATDHO010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1626)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1626)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1626
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309719"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VIY07_05165"
     CDS             complement(<1..447)
                     /locus_tag="VIY07_05165"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEY6381175.1"
                     /translation="MDAQSIIARRVARELRDGMLVNLGIGIPTLVANYVPKDMKVFFQ
                     SENGLIGTGAIPEEGMASPLLTDAGGKPVTALPGACTFDSATSFGLIRGGHVDVTVLG
                     ALQVDAKGQLANWMIPGKMVPGMGGAMDLVTGAKRVIIAMQHTAKGK"
     gene            complement(453..1100)
                     /locus_tag="VIY07_05170"
     CDS             complement(453..1100)
                     /locus_tag="VIY07_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HEY6381176.1"
                     /translation="MKTVSVENAVALIPDGATLMVGGFMAVGTPERVIDELVRQGKKN
                     LTIIANDTALPGRGIGKLVDKGLVSRAVTSHIGLNPETQRQMLDGKMAVDLVPQGTLI
                     ERIRAGGFGLGGILTPTGVGTIVEEGKQKVDVNGKSYLVETALRADFALISAFLADYL
                     GNLSYALTARNFNPVMAMAGETTIVTAEHIVPVGLIAPDHVVTPAPLVDYLVANG"
     gene            1362..>1626
                     /locus_tag="VIY07_05175"
     CDS             1362..>1626
                     /locus_tag="VIY07_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEY6381177.1"
                     /translation="MTDSKTDQTKAATFSWFPPARWLAEYRPVWLSSDIVAGMTLAAY
                     AIPVSLAYAGLAGLPPQVGVYGYLLGGLGYALLGSSRQLAVGPT"
BASE COUNT          320 a          506 c          437 g          363 t
ORIGIN      
        1 cttacctttg gcagtgtgct gcatcgcgat aatcacgcgt tttgcaccag tcacaagatc
       61 catcgcgccg cccatgcccg gcaccatttt gccgggaatc atccagttcg cgagctgccc
      121 ttttgcatcg acctgaagcg caccaagaac cgtaacgtcc acgtggccgc cgcggatcaa
      181 gccaaacgac gtcgcgctgt caaacgtgca tgcgccgggt aacgccgtca cgggctttcc
      241 gccggcatcg gtaagcagcg gacttgccat tccttcttcc ggtatggctc cagtgccgat
      301 cagaccattc tccgattgaa agaatacctt catgtctttg ggaacgtagt ttgccaccag
      361 ggtcggtatc ccgatgccca agttcacgag catcccatct cgcagctcac gggcaacacg
      421 tctggcgatg attgattgag catccattct catcatccgt tcgcgacgag atagtcgaca
      481 agtggcgctg gcgtgacgac atgatccggc gcgatcagcc ccacgggaac gatatgctcg
      541 gctgtgacga tcgtagtctc gccggccatg gccatgaccg gattgaaatt ccgggctgtc
      601 aacgcatagg aaagattgcc gagatagtcc gcaagaaacg cgctgatcag tgcaaagtcg
      661 gcacgcagcg cggtctcgac caggtagctt ttcccgttga cgtcgacttt ctgtttgcct
      721 tcctcgacaa tcgtgccgac cccggttgga gtcagtatcc cgccgagtcc aaaaccgcca
      781 gcacgaatgc gctcgatgag cgtaccctgc gggacgaggt cgacggccat cttcccgtcg
      841 agcatctgcc gctgtgtctc cgggttaagt ccgatgtggc tcgtgaccgc ccggcttacc
      901 agacctttat caacgagctt tccaatgccg cggcctggaa gtgccgtatc gttggcaata
      961 atggtgaggt ttttctttcc ctgccgcacc agctcgtcga tcacgcgctc cggggtcccg
     1021 acagccatga agccgccaac catcagcgtt gcaccgtccg ggatcagggc gacggcattc
     1081 tcgacagaaa ccgttttcat ggctgaacgg ccgcctttac ggtgctcttc ggacgaactt
     1141 cagatgcata ctgaggtaat ggagacgccg cacattgatg aaaatcaaaa ccagcacggt
     1201 tttgcagttt gtccttccac atttggcgcc tcaaccctgc ctgcctgttt caagatacga
     1261 tggtggccgc aatcttcgcg gtattgacct acgtcaacgg caggtcggct cgcagtgcct
     1321 ctctgacgcc aaggtcgaag gaacggcggg atccagttct catgacagac tcgaaaacag
     1381 atcaaacgaa agcagcaacc ttttcatggt ttccgccagc ccgctggctt gctgaatatc
     1441 gccctgtctg gctttccagt gacatcgtcg ccgggatgac gcttgccgca tatgcaattc
     1501 ccgtctcgct tgcctacgcc ggactcgcag gcttgccgcc acaagtcggc gtgtacggct
     1561 atctgttggg tggccttggc tacgccttgc ttgggtcttc gcgtcagctc gcggtcggcc
     1621 ccactt
//
LOCUS       DATDHO010000265         4978 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_309806, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000265 DATDHO010000000
VERSION     DATDHO010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4978
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_309806"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VIY07_05180"
     CDS             complement(<1..446)
                     /locus_tag="VIY07_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY6381178.1"
                     /translation="MPFSHLGLSPKVLAAIKAAGYKTPTPIQDQAIPHVLARRDVLGI
                     AQTGTGKTAAFVLPMLTMLEKGRARARMPRTLILEPTRELAAQVADHFEKYGKNHKLN
                     VALIIGGVSFDDQDAKLLRGVDVLIATPGRLLDHFERGRLLLSGCEL"
     gene            758..1924
                     /gene="pobA"
                     /locus_tag="VIY07_05185"
     CDS             758..1924
                     /gene="pobA"
                     /locus_tag="VIY07_05185"
                     /EC_number="1.14.13.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019997218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018659 - 4-hydroxybenzoate
                     3-monooxygenase activity [Evidence IEA];
                     GO_process: GO:0018874 - benzoate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate 3-monooxygenase"
                     /protein_id="HEY6381179.1"
                     /translation="MRTQVGIIGAGPAGLMLARLLHMQGIESIIIENRSRDYIENRIR
                     AGLIEHWAADLLADVGVGERLKREGMLHWGINIGINGELHRIDFKALVNKRVTIYGQQ
                     EVVKDLVARRLADGGPLLFEVDDVTVHDLKTQKPKIRFKHEGRPQEIDCDYVAGCDGF
                     HGICRPSIPDGVLSVFEREYPFGWLGILSESPPPDHELIYSYTDRGFALYTMRSPTLA
                     RLYLQCDHDEEIENWSDQRIWDELHKRLGGARKLQEGKMLQKGITPMRSFVVEPMQYG
                     RLFLAGDSAHIVPPTGAKGMNLAFADVVMLSRALEDFYKNKRSDRLENYSSKCLRRVW
                     YAQRFSWWMTQIMHRFPNESAFDRRRQLSDLDYLTSSRAASTPLAEQYVGLPLD"
     gene            complement(1921..3279)
                     /locus_tag="VIY07_05190"
     CDS             complement(1921..3279)
                     /locus_tag="VIY07_05190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HEY6381180.1"
                     /translation="MTTIRGFRRYNHGASEEIFGHPRALAYLFATEMWERFSYYGMRA
                     LLVLYMVKYLFASPREGAVIGLASFQSALELVFGPLAPQPLASQVYGFYTGLVYLTPI
                     LGGLLADRVLGQRRTVVIGATLMAIGHFMMAFERLFLIALVFLILGNGAFKPNISTQV
                     GSLYPPGDRRRDRAFSIFYVGINLGAFLAPLICGTLGEELGWHYGFTAAGIGMTLALV
                     IYLLATPHLPDDAFARRALPAGGLDANAWRSIIALLLLFVPVSLFWATYEQQGNTITL
                     WADQFTDRRVIGGEIPVTWFQAFNPFMIFAFTPLIVAFWRSQGAREPSTITKLAIGCL
                     INALAYLVMVIAALNAGGGKASWLWLFVYFVTITVGELYLSPTSLSLVTKIAPKPLLS
                     MMMGVWLATSFVGGFLAGYLGTFWSTMDKSSFFLMLALISLVSGVAILLLRASLRSVL
                     RD"
     gene            3415..4386
                     /locus_tag="VIY07_05195"
     CDS             3415..4386
                     /locus_tag="VIY07_05195"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6381181.1"
                     /translation="MARIRSGILCALLVFLAYAGDAHAQSDYPNRPIHFIVGFAAGGG
                     NDLFARLVVQKFQESTGATTVIENRVGAGGRIAAEFVARQPADGYTVLVGATGQMSIA
                     TAIFPDLGYHASNSFIPLNMIASFPLVLVVPADHSAKDLKDLIAWAKANPEKSNYGTS
                     SPAFTIASELLKLKSGMPAVGIPYKSSNESNLSVVSGQSLFTISDGPPVIPLVKAGKI
                     RALAVTGSERSAELPEVPSMAEAGFPDVNTELWSGFFVPAGTPAPIVAKLTAEFGKAL
                     ADPAVQDGLRKMAVKPGGPTGDAFKKRIDEDIRSFANVVKAANLTFR"
     gene            4655..4975
                     /locus_tag="VIY07_05200"
     CDS             4655..4975
                     /locus_tag="VIY07_05200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381182.1"
                     /translation="MPSAGLVLEDHNLGPNYTVNRYSVLSAEKVSPTNLSVSVIFQPG
                     TEVEERQKLVFAVREKTRRTIFNQTDGGSVRVRDGIALARGSKTPLLHKCGNVGASTG
                     LHAD"
BASE COUNT         1105 a         1418 c         1481 g          974 t
ORIGIN      
        1 agctcgcaac ccgacaaaag cagccgcccg cgctcgaaat gatccagcag gcgtcctggc
       61 gtcgcgatca gcacgtcgac gccgcggagc aacttcgcat cctgatcgtc gaaagaaacg
      121 ccgccaatga tcagcgcgac gttaagcttg tggttcttgc cgtacttctc gaaatggtct
      181 gcgacctgcg cagcaagctc ccgcgttggc tcgagaatga gcgtgcgcgg catgcgcgca
      241 cgcgcgcgtc ctttctcgag cattgtcagc atcggcagca cgaatgcagc ggtcttaccg
      301 gtgccggttt gcgcaatgcc gagcacatcg cgtcgcgcga gcacgtgcgg gatagcctgg
      361 tcttggatgg gggtgggagt tttgtaacca gccgctttga tggcggcgag aactttgggg
      421 gataggccca gatgggaaaa aggcatagaa cctcagaagc cgcccagttc gcgccggacc
      481 agagaaaacc agtttgcttt gcgcggagga cggccgaatc ttcatgtcag accggttgct
      541 gggaacatag ggtgcaaaga gccaaagtca atgctttgta tcgcgataag tcgtattaat
      601 tcttaatctt tcggcttgca gagcttcgcg accgcggtct tttttaccac tggcgcactt
      661 tgcgcgtgcc ccattgtgca agggtttccg gtcttcgtcc ctttgcctcc atggacctcg
      721 agtttatagc gaacgaacta ttcgccgaaa gccactcatg cgcacccaag ttggaattat
      781 cggagcaggg cctgccggtc tcatgttggc aaggctcctg catatgcagg gcatcgagtc
      841 gatcattatc gaaaatcgca gccgcgatta tatcgaaaac agaatccgcg cgggattgat
      901 cgagcattgg gctgccgacc tcctcgctga tgtaggcgtc ggtgagcgcc tgaagcggga
      961 gggcatgctg cattggggga tcaacatcgg catcaacggc gaactccatc gcatcgattt
     1021 caaggccctg gtgaacaagc gcgtcaccat ctacggccag caggaggtcg tgaaggatct
     1081 ggtcgcccgc cgactggctg acggagggcc attactgttc gaggtcgacg acgtcacggt
     1141 ccatgacctg aagacgcaaa aaccgaagat ccgcttcaag cacgaaggtc ggcctcagga
     1201 gatcgattgc gattacgttg ccgggtgcga cggttttcac ggaatttgcc ggccaagcat
     1261 tccggacggc gtcctcagcg tgttcgagcg cgagtatccg ttcggatggc tcggcatact
     1321 ttctgaatcg ccgccgcccg atcacgaact gatctattcg tacaccgatc gcggttttgc
     1381 actctatacc atgcgctcgc cgacgctggc gcggctctac ctgcaatgcg atcacgatga
     1441 ggagatcgaa aactggtccg accagcgcat ctgggacgaa ctgcacaagc gactcggcgg
     1501 cgcgcgcaag cttcaggaag gcaagatgct gcaaaagggc attacgccga tgcggagctt
     1561 tgttgtcgag ccgatgcaat atggacggct gttcctcgcg ggggacagcg cgcacatcgt
     1621 gccgccgacc ggcgcgaaag gcatgaacct ggcgtttgcc gacgtggtga tgctctcgcg
     1681 cgcgcttgag gatttctata agaacaagcg aagcgaccgc ctggagaatt attcatcgaa
     1741 atgcctgcga cgggtgtggt acgcgcaacg gttctcatgg tggatgaccc aaatcatgca
     1801 ccgctttccg aatgagtcgg cgtttgaccg tcgtcggcag ctctccgatc tcgactatct
     1861 caccagctcg cgcgcggcct cgaccccgct tgccgagcaa tatgtcggcc tgccgctcga
     1921 ctagtctcgc agcaccgaac ggagcgatgc gcgcaagaga aggatcgcga cgccggaaac
     1981 gagcgatatc aaggcaagca tcaggaaaaa actgctctta tccatcgtcg accagaacgt
     2041 gccgagatag ccggccaaaa atcctccgac gaaactggtt gcaagccata cgcccatcat
     2101 catcgacaac agcggctttg gcgcgatctt tgtcaccagc gacaagctcg tgggcgaaag
     2161 gtacagctca cccaccgtga tggtcacgaa gtacacgaat aaccatagcc agcttgcctt
     2221 tccccctccg gcatttaacg ccgcaatcac catgacaaga taggcgaggg cattgatcag
     2281 gcatccgatc gcgagtttgg tgatcgttga cggctctctc gccccttggc tgcgccagaa
     2341 cgcaacgatg agcggcgtga acgcgaaaat catgaacgga ttgaatgctt gaaaccaggt
     2401 caccgggatt tcgccgccga tgacgcgacg atcggtaaat tgatcggccc aaagtgtgat
     2461 cgtgttgccc tgttgctcat acgtggccca aaacaggctg accggcacga acagcaagag
     2521 cagcgcgatg atcgaccgcc atgcattggc atccaggccg ccggccggca gggcgcgccg
     2581 ggcgaacgcg tcgtcaggca ggtgaggtgt tgcaaggaga tagataacga gcgcgagggt
     2641 catgccgatc ccggcggcgg tgaacccgta gtgccagcca agctcttcgc cgagggtgcc
     2701 gcagatcagt ggcgcaagga atgcgccgag attgatgccg acgtaaaaga tcgaaaaagc
     2761 ccggtccctg cgccgatcgc caggcgggta cagggagcca acctgggtcg atatgttcgg
     2821 cttgaacgca ccattgccca agatgagaaa taccagcgcg atcaggaaga gccgttcgaa
     2881 cgccatcatg aaatggccaa tggccatgag cgtggcgccg atgactactg tccggcgctg
     2941 acccagtacc cggtcagcca gcaatccacc gaggattggc gtcaagtaga ccaggcccgt
     3001 gtagaaaccg tagacttgcg aggcgagggg ttggggagcg agcgggccga acacgagttc
     3061 cagcgcactt tgaaaagacg caaggccaat cacggcccct tcgcgcggcg aagcaaacag
     3121 atacttgacc atgtagagaa cgagcagggc ccgcatcccg tagtaggaga agcgttccca
     3181 catttcggtt gcgaacaggt aggcaagcgc ccgtggatga ccgaaaattt cctcgctcgc
     3241 gccatggttg tatcgacgga aaccgcgtat tgtcgtcatg gcccggtctt aggtgacggc
     3301 tggtgcatca aacagtagca gatcatggcg aaagcgtttt cctgccggcg ttgccagata
     3361 cgcttttgcc atcgcggccg gggagggaag gcgcgcaaac ggggataaaa aaacatggcg
     3421 aggattcgca gcggcatact gtgcgcattg ttagtgtttc tcgcatatgc gggagatgcg
     3481 catgctcaat ctgactatcc gaacaggccg atccatttca ttgtcggctt cgcagccggt
     3541 ggcggcaacg acttgttcgc tcgcctcgtg gtgcaaaagt ttcaggaaag taccggcgct
     3601 acgaccgtga tcgaaaaccg cgtgggtgcg gggggccgga tcgccgccga attcgtcgcc
     3661 cgacaaccgg ccgatggata cacggttctc gtgggcgcaa ccggacaaat gtccattgcc
     3721 accgcgattt ttcccgacct gggctatcat gcaagcaaca gctttatccc gttaaatatg
     3781 atcgcgtcct tcccgctcgt gctcgtcgta ccggcggacc actcggcgaa ggacttgaaa
     3841 gaccttatcg cctgggcgaa agccaatccg gaaaagtcaa actatggcac gtcatcgccc
     3901 gccttcacca ttgcaagcga gctgctcaag ctcaaaagcg ggatgcctgc cgtgggaatt
     3961 ccctacaaga gcagcaatga gtcgaacctg agcgtggttt ccggacaaag ccttttcact
     4021 atctcggatg ggccgcccgt tatcccgctg gtcaaggcgg gcaagatccg tgccctggcg
     4081 gtcacagggt cggagcgctc tgccgagttg ccggaggtgc cgagcatggc cgaagccgga
     4141 tttccggacg tcaacaccga actgtggagc ggattctttg ttcctgccgg cacgccggct
     4201 ccgatcgttg ccaagctgac ggcggaattc ggcaaggcgc ttgccgatcc tgcggtccag
     4261 gatggtcttc gtaagatggc cgtcaagccg ggaggcccga ccggagacgc attcaagaag
     4321 cgtatagatg aggacatccg aagttttgcc aacgtggtga aggcggccaa cctgactttc
     4381 aggtaggtat cgtcgttacc tgcgttctaa atctttccgt cttctgacct aaatcaattg
     4441 ccgccgcgcc gacggctgct atgctacttg caggtggagt ggcgaagcga tgcggttgtc
     4501 ggcagcactt gccttgtgtg tatccttcgc aatgctcagt agtgcgaacg gagaatcggt
     4561 cgaagaatta ttcaatcagt tcagtctgtt tggaaattgg gcgactaatt gcaacacccc
     4621 tccgacaccc gctaatcccc acgtcagcat cacgatgccg agtgcggggc tggtcctcga
     4681 ggaccacaat ctcggtccta actatacggt caaccgctac agcgtattgt ccgcggaaaa
     4741 agtatcgcca accaatctgt cggtcagtgt gatctttcaa cctggcaccg aggttgaaga
     4801 gcgccaaaag cttgtttttg ccgtgcgcga gaagacgcgc cgcaccatat tcaaccagac
     4861 cgatggcggc tcagttcgcg tcagggacgg gattgcattg gcgcgcggca gcaagacgcc
     4921 gctgctgcat aaatgcggga acgtaggcgc cagcaccggt ttacacgctg actgatac
//
LOCUS       DATDHO010000266         1924 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_60539, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000266 DATDHO010000000
VERSION     DATDHO010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1924)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1924)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1924
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60539"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..1648
                     /locus_tag="VIY07_05205"
     CDS             68..1648
                     /locus_tag="VIY07_05205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381183.1"
                     /translation="MHQLIGVHAEEVYGERSAEIAAELAMHFEQGHDYRRAVKYLRLA
                     ARNHSLRYANREAIAYLSRALELLERWPETERTEVRIAMLEEVGLARIAMGEMVAAAE
                     DFAALADYAREQGRIEDEAKASDHIATALSWVDRERCLAAAERYVTLSRSADNELLQA
                     DARGCWGYWQVLFLAWGDDHAEAIKQANAAARRAGSQKKGGLRVARLSFIESLQSQYP
                     AACRTAEEGAQLALELSDAHSFLLSQYYLAWGLLHSGHWGEMRRILDHGLEMADRNES
                     PRWTVLFKLELAWLYEQAFDFEAARDICEQAQKQARNIGHPYTESLSLILLGMARLGL
                     GRREAAFRCFSEVAERMERERVLMDWILRLLLHDGLSRYWLTQGKHERARREAETLRD
                     LAALPGERTYLALAHRMLAEVALAAQQLGDAENEISRALAVLEGAEAPLAELRVCATA
                     GRLYEQLGRTTEAADHKRQSAETLNRLADSLDKADQLRQSLLNGHVSMLLSGYASPSS
                     LPAEQSEHELAHELSVAH"
BASE COUNT          374 a          549 c          636 g          365 t
ORIGIN      
        1 cggcttcatt cacgcgctct atcaagaagt cctctatcag cgcgtggccg ccggccgccg
       61 cgcgcgcttg caccaactga tcggcgtgca tgcggaggag gtctatggag agcgctccgc
      121 ggagatcgcc gccgaattgg cgatgcactt cgagcagggg cacgattacc ggcgcgcggt
      181 aaagtatcta aggctggccg cccggaatca ctccctgcgc tacgccaatc gggaggcgat
      241 cgcctacctc agtcgcgcgc tcgagttgtt ggagcggtgg ccggagaccg agcgaaccga
      301 ggtgcgcatc gcgatgctgg aagaagtggg gctcgcgcgc atcgcgatgg gcgagatggt
      361 cgcggccgcg gaagatttcg cggcactcgc cgactacgcg agggagcaag gccggattga
      421 agacgaggcg aaggcatcag accacattgc gaccgcactc tcatgggttg atcgagagag
      481 gtgtctggcc gctgccgagc gatatgtgac gctcagccga agcgccgaca acgaactgtt
      541 gcaagcggac gcgcggggct gctggggcta ctggcaagtg ctttttctcg catggggcga
      601 cgatcacgcc gaggcgatca agcaagctaa tgcggcggcg cgccgagccg gatctcagaa
      661 gaaagggggg ctgcgcgtgg cgcgtctcag cttcatcgag agtctgcagt cgcagtaccc
      721 tgcggcctgc cgcacggcgg aggaaggggc gcaattggcg ctggaactaa gcgacgccca
      781 cagctttctg ctctcccaat actatctggc ttgggggctg ctccactccg ggcattgggg
      841 tgagatgcga cggattctcg accatgggct tgagatggct gatcgaaatg agagcccgcg
      901 ctggacggtg ctctttaaac tagaactggc ctggctatat gagcaggcgt tcgacttcga
      961 ggccgcccgc gatatatgtg aacaggcaca aaagcaggca cgaaacatcg ggcatccata
     1021 caccgagtct ctgagcctga tcctgctggg catggcgcgc ctgggactgg gccggcgcga
     1081 agcagctttc cgctgcttca gcgaggtcgc cgaacggatg gagcgcgagc gcgtcttgat
     1141 ggattggatt ttgcgtctcc tactgcatga cggcttgagt cgctattggc tgacccaagg
     1201 gaaacatgag cgagcgcgcc gggaggccga aacgctgcgc gatctggccg cgctaccggg
     1261 cgaaagaaca tatttggcgc tcgcgcatcg gatgctggct gaagtcgcgc tggccgctca
     1321 gcagttgggc gatgccgaaa atgaaatttc gcgtgcgcta gccgtcctcg aaggagcgga
     1381 agcgccattg gctgaattgc gcgtgtgcgc gacggcgggg cgcctctacg agcaactagg
     1441 tcgcacaacc gaagccgctg atcacaagcg gcaatcagca gagacgctca accggctggc
     1501 cgattcgctg gacaaggccg accagttgcg gcagtcgctc ctcaacgggc atgtgtcgat
     1561 gctactcagc ggttacgctt ctccttcaag tcttcccgct gagcaatcag aacacgaact
     1621 tgctcacgag ctgtcagtgg cgcactaatg tgggctgcga ggcgccgtgg acaatccgac
     1681 cgtagatcgc tggttcgacc ccagggcttt tgtcgtcgtc cctactggtt cgtaccggtt
     1741 cggcgcattg tcattctcat aattgaaaga aatcggagat gttgatgaac tctgtcttta
     1801 cgatcttccg gcttatcctg acagtcatct ggctgtgcgg gacatttacg caagccagcg
     1861 attggtcgcg tttccggggg cccaatgggt ccggcgtcag cggcgggcat aatctgccga
     1921 ttgt
//
LOCUS       DATDHO010000267         1697 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_210799, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000267 DATDHO010000000
VERSION     DATDHO010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1697
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_210799"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1109
                     /locus_tag="VIY07_05210"
     CDS             <1..1109
                     /locus_tag="VIY07_05210"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: protein motif:HMM:NF006618.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HEY6381184.1"
                     /translation="LDLAQSGVVMTENYSPGYPLPLGRIDAALPSVDELPLRDRSRNN
                     QLALAALTQIRPAVDGAIERYGAERIGIVIGTSTSGIAEGESALRQYAITGALPEQFH
                     YGQQELGSPASMLAAKLGIGGPAYVHSSACASSAKALASAARLIRMGVCDAVLAGGVD
                     SLCAFTVAGFKALESISEKRCNPLSRNRDGINIGEGAAMFLMSTKPSTVALRGWGESS
                     DGYHMSAPDPAGVGARLAIEHALARAGIGAAQIDYVNLHGTGTLQNDAMESRVIHALF
                     GAEVSVSSTKPFTGHTLGAAGAIEAGLCWLAMQDDNPEGKLPPHLWDGTPDPDLPVLN
                     VAERGSCLGQPLRWILSNSFAFGGANATLVLGRE"
     gene            1111..1563
                     /locus_tag="VIY07_05215"
     CDS             1111..1563
                     /locus_tag="VIY07_05215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog family protein"
                     /protein_id="HEY6381185.1"
                     /translation="MDMPDIRSLIPHAGPMVLLDRVISVDEDSLLAEVCIRSDSLFCN
                     GGGVGAWVGIEYMAQAIGAWAGYTARLRGEPPKLGFLLGTRRYECRRPIFLLGSVLRV
                     HVQRLYQNENGLGSFECSIDNEEGRVATATVTVFQPHNVNDFILGSAE"
BASE COUNT          326 a          435 c          551 g          385 t
ORIGIN      
        1 tgctggatct agcacaaagt ggcgtcgtga tgactgaaaa ctattcgccg ggatatcccc
       61 tgccgcttgg tcggatcgat gccgcgctgc cgtctgtgga tgaattgcct ttgcgtgatc
      121 gcagccgcaa caatcagctc gcattggcag cgctgaccca gatacgaccg gcggtggatg
      181 gtgccatcga acgctatggc gccgagcgaa tcggcattgt gatcggtact agcacctccg
      241 gaattgccga aggtgaatct gcgctgcgtc aatacgccat caccggcgcg ctgccggaac
      301 aatttcatta tggccaacag gaactaggct cgcccgcatc tatgttggcc gcgaagcttg
      361 gaatcggcgg cccagcctat gttcattcga gtgcctgcgc gtcgagcgcc aaggcgctgg
      421 ccagtgcggc tcgtttgatc cggatgggtg tgtgcgacgc ggttctcgcc gggggagtgg
      481 attcgctgtg tgctttcacg gtcgccggat ttaaagcgct tgagtcgatc agtgagaagc
      541 ggtgcaaccc gctcagtcgg aaccgcgacg ggatcaatat tggcgagggg gctgcgatgt
      601 ttctgatgag cacgaagcct tcaaccgttg ccctgcgcgg ttggggcgag tcgtccgacg
      661 gttatcacat gtcggcgccc gatcctgccg gcgtgggcgc acgattggcg attgagcatg
      721 ctttggcacg cgcgggtatt ggcgccgcgc agatcgatta tgtgaacctg cacggcacgg
      781 gaacgttaca aaatgatgcg atggaatctc gcgtgattca cgcgcttttc ggtgccgaag
      841 tttcagtcag ctcgaccaag ccttttaccg gtcacacgct cggcgcggcg ggtgcgattg
      901 aggctggact gtgctggttg gcgatgcagg atgataatcc tgagggcaag ctgccaccgc
      961 acctgtggga tggtacgcct gatccggact tgcccgtcct aaatgtggcc gagcgcggaa
     1021 gctgcctcgg gcagccattg cggtggattt tgagcaactc gttcgccttc ggcggtgcga
     1081 acgcaacgct cgtgctcggg agagagtgat atggacatgc cagacatccg atcgctgatt
     1141 ccgcatgcag gtcccatggt gctgctcgat cgtgtcatct cggtggacga agatagttta
     1201 ctcgctgaag tttgcattcg atcggacagt ttgttttgca acggtggcgg cgtcggagcc
     1261 tgggttggaa tagagtacat ggctcaagcg atcggggctt gggcgggata taccgctcgg
     1321 ttgcggggcg aaccgcccaa gcttggattt ttgcttggaa cgaggcgtta tgaatgccgg
     1381 cggccgattt ttttattggg cagcgtgctg cgggttcatg tccaacgtct atatcagaac
     1441 gaaaatggat taggttcttt tgagtgctcc atcgataatg aggaagggcg ggttgccaca
     1501 gccactgtca ctgtatttca gccgcacaat gtcaatgatt tcatcctggg gagtgcagag
     1561 tgagaaaaag tgtattggtc acgggctcga gtcgaggtat cggaaaagcc attgccctgc
     1621 gcgttgcaca agacggttac gacatcgtgc tgcattgtcg cagcaggcgt gaagaggctg
     1681 acagcgtcgc ccaagcg
//
LOCUS       DATDHO010000268         2200 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_359003, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000268 DATDHO010000000
VERSION     DATDHO010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_359003"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            287..1345
                     /locus_tag="VIY07_05220"
     CDS             287..1345
                     /locus_tag="VIY07_05220"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY6381186.1"
                     /translation="MKLKRTIIRGGLETLYFSGMHHWLRPLVGGRGAILTLHHVRPAR
                     VDAFQPNRLLEITPEFFEGLLRRLSRARIDVVTLDEMHRRFIEDDFKRRCVCLTFADG
                     YRDFLRWAYPLLRKYKTPFAMYIATSFPDRLGELWWVALETVVAKNSRIGMVINGKDQ
                     YFESTTVREKRELYDAIFGYLRRMQNEEDLRRAVRDLCVTYGIDSASFCRDMCMDWSE
                     LAELAADSLCTIGAHTVNHMMLGRLSSDATVRAEIQMSRSVLEAALGKRPQHLAYPFG
                     DRMSAGHREFRIAAELGFKTAVTRRYGVLFKAHRDHLTALPSIPVNGEFQQQRYLKVL
                     MSGAGTAFSNGFRRVNAA"
     gene            complement(1360..1569)
                     /locus_tag="VIY07_05225"
     CDS             complement(1360..1569)
                     /locus_tag="VIY07_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2842 domain-containing protein"
                     /protein_id="HEY6381187.1"
                     /translation="MSIRTRKFVGTIALLLLVMVWGLLAMALAQSVLTDINGFVAAIY
                     YIVAGLGWVLPAMPLISWMARPDRA"
     gene            1650..>2200
                     /locus_tag="VIY07_05230"
     CDS             1650..>2200
                     /locus_tag="VIY07_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HEY6381188.1"
                     /translation="MPETAKASKIDLRVVRLWLLAAAAMIFLTLVVGGATRLTESGLS
                     IVEWKPITGVLPPMSETAWQAEFAKYQTIPQYRELNRGMNLDAFKLIYWWEWSHRLLA
                     RLTGVVFLLPFLFFLWRGAIPANLRARLWAIFGAGAALGAVGWWMVSSGLTQGVSVSQ
                     YRLAFHLTLASAIYAAILWTAQQL"
BASE COUNT          446 a          631 c          653 g          470 t
ORIGIN      
        1 tggtggaaca tcaactccgg cgcacctgaa acctaaacca ttgaattgtc ggggatctcg
       61 gcagaaatcg acgcaagaga gcgcggacta taaggattct cgtggcgcaa ccttccaacc
      121 cgaacgggtc gagccaagga ggctcagccc atgcgaactc gcgtatcccg atgcgaatcc
      181 gacgctgctg gcggttctct ccgtcgggta tgccacaggt ttgcaaaaat ttttcgatag
      241 acggcgcctc gggatagtag atgatctcgg cgggccgggg ggcttcgtga aactgaaaag
      301 aaccattatc cgcggcggcc tcgagactct ctatttcagc ggcatgcatc attggttgcg
      361 cccactggtg ggcggcaggg gcgccatcct gacgctgcac cacgtgcggc cggctcgtgt
      421 agatgccttt cagccaaacc ggcttctcga gatcacgccg gaatttttcg agggcctttt
      481 gcggcgtctc tctcgcgcgc gcatagacgt cgtgaccctc gacgaaatgc accggcgctt
      541 catcgaggat gatttcaagc gccgctgcgt ctgtctgacc ttcgcagatg gctacagaga
      601 ttttttgcga tgggcgtatc cgctcttgcg caaatacaag actcctttcg ccatgtatat
      661 cgccaccagc tttccggaca ggctcggtga attgtggtgg gtggcactcg aaaccgtagt
      721 cgcaaagaac agccggatcg ggatggtgat caacggcaag gaccaatatt tcgaaagcac
      781 aactgtgcgc gagaagcgtg aactttatga tgcaattttt ggatatctgc gcaggatgca
      841 gaatgaggaa gacctgcgcc gcgcggtgcg ggatctctgc gtgacctacg gcatcgatag
      901 cgcgtcgttc tgccgcgata tgtgcatgga ttggtccgaa ctcgcggagc tcgccgccga
      961 ttcgctttgc accatcggcg cgcacacggt gaaccacatg atgctcggga ggctttcgag
     1021 cgatgcaacg gtccgcgcgg aaatacaaat gagccgctct gttttggagg cggcactcgg
     1081 caaacgccca caacatctgg cttacccgtt tggcgatcga atgtcggccg gtcaccgcga
     1141 atttcgcatt gcagccgagc ttggcttcaa gacagcggta acgaggcgat atggcgtcct
     1201 ctttaaagca catcgcgatc atctgaccgc gctgccgagc atcccggtga atggcgaatt
     1261 tcagcagcaa cgatatctga aagtgctgat gtccggagca gggacagcct tttcgaacgg
     1321 cttccgccgc gtgaatgctg cctagatctt tctcatcagc tacgcgcggt caggtcgggc
     1381 catccagctg atgaggggca tcgcgggcag aacccatcca agcccggcaa cgatgtaata
     1441 gatcgctgcc acaaagccgt tgatgtccgt caacacggat tgcgcaagcg ccattgccag
     1501 caggccccac accatgacga gcaggagcag ggcaatggta ccgacgaatt tgcgcgtacg
     1561 gatggacatg gtggctcttc gtcgcgctcg gtttgcggac gcgcggacat gactatatgg
     1621 tccgcgccac ctcctgaaag caagcactca tgcccgagac agccaaagcg tcaaaaatcg
     1681 atctgcgcgt tgtgcggctt tggctgctcg cggcggctgc aatgatcttt ttgaccctgg
     1741 tcgtaggcgg cgcgacacgg ttgacggagt cgggactgtc catcgtcgaa tggaaaccga
     1801 ttacgggtgt gttgccgcca atgtcggaga ccgcgtggca ggccgaattc gcgaaatacc
     1861 agacgatccc gcaataccgg gagctcaacc gcggcatgaa cctggacgct ttcaagctta
     1921 tctattggtg ggaatggtcg caccgcctcc tggcccgcct gaccggagtt gtttttcttc
     1981 tgccattctt gttttttctc tggcgaggcg ccattcccgc aaacctgcgc gcgcgcctgt
     2041 gggcgatttt tggcgccggc gccgctctcg gcgcggtcgg ctggtggatg gtttcgtccg
     2101 gtcttacgca gggcgtgagt gtttcgcagt accggctcgc attccatctt acactcgcaa
     2161 gcgcaatcta cgcggcgatc ttgtggacag cccagcaact
//
LOCUS       DATDHO010000269         1560 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_260986, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000269 DATDHO010000000
VERSION     DATDHO010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_260986"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1226
                     /locus_tag="VIY07_05235"
     CDS             <1..1226
                     /locus_tag="VIY07_05235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEY6381189.1"
                     /translation="LLARLLQLNDTQEGVLNIAFRVADEQGLALLDLKDLRAILGLVA
                     DHAAELQKAYGNVSPATVGTVQRQLLVLENQGANSFFGEPALDLADFLRTDRDGRGII
                     NVLAADKLIANPRLYATFLLWLLSELFEELPEVGDPEKPKLVFFFDEAHLLFNDAPKP
                     LLEKIDQVVRLVRSKGVGVYLVTQNPLDVPETVLAQLGNRVQHALRAFTPRDQKSVRA
                     AADTFRPNKDLDTAKAITELGKGEALVSFLEGNGVPSMVQRTMIRPPCARIGPVTPAE
                     RKAVIAKSPVKGKYDTPVDSESAYEILQKRMQNTAATPAPGQPGQQDQAGQAGGGWFG
                     QIGGMIGTIFGTNVPRGTRLSTGQRMSREVARSVTNRVAGQIAADLGKSVGGSMGGTI
                     GRAIVRGTLGGILRR"
     gene            complement(1223..>1560)
                     /locus_tag="VIY07_05240"
     CDS             complement(1223..>1560)
                     /locus_tag="VIY07_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6381190.1"
                     /translation="PTAPIAERWETLWHYMQSGPGVFKGDLNFHMVDGDIRDRVDQID
                     IKCCPLFLLTGEYDYSCTTEATLDVAKRTGAPATIMQGLGHFPMSEDPEKFVSYLLPV
                     LEKIRALKV"
BASE COUNT          300 a          468 c          494 g          298 t
ORIGIN      
        1 tgctattggc ccggctcctg cagctcaatg acacgcagga aggcgttctc aatatcgcgt
       61 ttcgcgttgc cgacgagcag ggacttgcgc tgctcgatct caaggatctg cgcgcgattc
      121 ttggtttggt cgccgatcat gctgccgagc tgcaaaaggc ctatggcaac gtctcgcccg
      181 cgacggtcgg gacggtgcag cggcaattgc tggtactcga aaaccagggc gccaactctt
      241 tcttcggcga gccggcactg gatcttgccg atttcctccg caccgaccgc gacggacgcg
      301 gcatcatcaa tgtgctcgcg gccgacaagc tcatcgcgaa tccgcggctc tatgcaacct
      361 tcctgctctg gctgctgtcg gagctgttcg aggagcttcc cgaggtgggc gatccggaga
      421 agccgaagct cgtattcttt ttcgatgaag cgcatctgct gttcaacgac gcgccgaagc
      481 cgctgctgga aaagatcgac caggttgtgc gcctggttcg ctcaaaaggg gtcggagtgt
      541 atttggtgac gcaaaatcct ctcgacgttc cggaaacggt gttggcgcag ctcggcaacc
      601 gcgtgcagca tgcgctgcgc gcattcacgc cgcgcgatca gaagtcggtg cgggcggccg
      661 ccgacacttt ccggcccaat aaggatctcg atacggccaa ggccatcacc gagcttggca
      721 agggcgaggc attggtttcg ttcctggaag gcaacggggt gccatcgatg gtccagcgca
      781 caatgatccg cccgccttgc gcgcgcatcg ggccggtcac tccggctgaa cgcaaggccg
      841 tgatcgccaa gagcccggtc aaaggcaaat acgatacgcc ggtcgactcc gagtccgcat
      901 acgagatttt gcagaagcgg atgcagaaca cggccgctac gcccgcgccg ggacagccag
      961 gtcagcaaga tcaggctgga caggccggcg gcggatggtt cggccagatc ggcggcatga
     1021 taggcaccat ttttggcacc aacgttccac gcggcacccg cttgtcgacg ggtcagcgca
     1081 tgtcacgcga ggtcgcgcgt tctgtcacca atcgggtggc ggggcagatc gctgccgacc
     1141 tgggcaagtc cgtcggcggc tcgatgggcg gcaccatagg ccgcgccatc gtgcgtggca
     1201 cactaggagg aattctgcgg cgctaaacct tcaacgcacg aattttttcc agcaccggca
     1261 acagatacga gacgaatttc tccgggtctt cgctcattgg aaagtggcca aggccctgca
     1321 tgatggtggc cggcgcgccg gtgcgcttcg ccacatcaag ggtggcctcg gtggtgcatg
     1381 aataatcgta ttcgccggtc agtaaaaaga gcggacagca cttgatgtcg atctggtcga
     1441 cacgatcgcg gatatcgcca tcgaccatgt ggaagttgag atcgccctta aagacgccgg
     1501 gcccgctctg catgtagtgc cagagagtct cccagcgttc ggctatcggc gcggtcgggg
//
LOCUS       DATDHO010000270         2464 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_456897, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000270 DATDHO010000000
VERSION     DATDHO010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_456897"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(479..1375)
                     /locus_tag="VIY07_05245"
     CDS             complement(479..1375)
                     /locus_tag="VIY07_05245"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6381191.1"
                     /translation="MSEPPRIAGPIQNPKAPSEKPPAKAWDAHAHIFGPADKFPFAPG
                     RGYTPPDAPVEAYVALLDQLGFAHGLLVQGNAHGYDNRVLLDALVRFPQRLRGVAITD
                     ARIAPATLRDWNRLGMRGLRFHLFSEAGRPGYVRGVGLDVFEVFRSSMRELGWVMQVF
                     CDWRLMSEVAATLREISREMPVIVDHMLNIPANRGVNDTNFQALLRLVGEGHVHVKLS
                     AAYRLSDEFPDYPDARPFHDALLRANPGRLVWGTDWPHPSIHASVMPDDGHLLDLFHR
                     WTSAESARRLILVETPARLFGN"
     gene            complement(1459..2436)
                     /locus_tag="VIY07_05250"
     CDS             complement(1459..2436)
                     /locus_tag="VIY07_05250"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6381192.1"
                     /translation="MAEINLTRRLLLAALGTASFAHLAGAQAAWPSRPVRVMVPYPPA
                     GGADTTARIVFGKLGEMLGQQFVIENRGGAGGTIGEAVVAKADPDGYTVLHDATAFSV
                     NSSLYSNLPFDYNKDFEPVALVSLVPNILVVTPTVPVKTVADVITLAKAAPDGIDMAS
                     SGNGTLQHLSLEMFRHRTGIKISHVPYRGGGLALNDVMSGQVKFFFANGSSVMGLIQG
                     GKVKAIAHTGKGRLTSLPDIPPISETLPGFEAYEWNGVFVPRGTPGEIVQALNRGLNA
                     ALRDPNVMSRFEQLNIDIRTTTPQEFRAFVQEQMTLWSQVIKEANIRLG"
BASE COUNT          512 a          752 c          716 g          484 t
ORIGIN      
        1 ctataagcac gcagaatgca gtccaggcca caacgccggc ggcgatggcg agcgccttcg
       61 tgcgcatgcc gctctgatcc tgcttttctg gcttatcgct cggtggcaaa aaagcatccg
      121 ccatgggttc gtcatccaag cgcatttcgt actgactcga tgtcaaatcc acggcgacgt
      181 gtgacggaac ctcagattcc cccagcgacg gctgaatcgg tggcgcggcg actctgccgt
      241 ttcgccatct cggcggtgca tagaacttgg ggtcttccgg actcagctcc ccatgctgaa
      301 taggtgtact cataccacgc ttactcccgc acaaaactcg acacacggct cacgacaaca
      361 cctaaagccg ggtgcagcgg gcccccacag tggcaagaat ggtaccgatt cttttggatt
      421 attcggaggt atcaaagcac tctggcccgt tgcaacaaaa atacctctgt atggacgctc
      481 aattgccgaa caaccgcgcc ggtgtttcca cgagaataag gcggcgcgcg gattccgcgg
      541 atgtccaccg atgaaacaag tcaaggagat ggccgtcgtc cggcataacg ctggcgtgga
      601 tcgacggatg tggccaatcg gtgccccata ccaaccggcc gggatttgct cgaagcaatg
      661 cgtcatgaaa cggccgcgcg tccgggtagt ccggaaattc atcggatagt cggtacgccg
      721 cggagagttt gacgtggacg tgcccttccc cgacgagtcg caacagcgcc tggaaatttg
      781 tgtcgtttac gcctcggtta gccggaatgt tcaacatgtg gtcgacaatg actggcatct
      841 cgcgtgagat ttcgcgcaag gtcgcagcca cctcgctcat tagccgccag tcgcagaaca
      901 cctgcatgac ccagccgagc tcacgcattg agcttcgaaa cacttcaaac acgtcgaggc
      961 cgacgccccg cacatagccg ggcctgccag cttccgaaaa caagtgaaaa cgcaaaccgc
     1021 gcatccctag cctgttccag tcacgcaagg tggctggcgc aatccgcgcg tcggtgatcg
     1081 cgacgccgcg caagcgctgc ggaaagcgca ccagcgcatc aaggagaacg cgattgtcat
     1141 agccatgcgc attgccctgc acgagcaggc cgtgggcaaa gccaagttga tcgagcagcg
     1201 cgacataggc ttcgactggc gcgtccggcg gggtgtagcc ccgtcccggc gcaaagggga
     1261 atttgtctgc cggcccgaag atatgagcat gtgcatccca tgccttcgcc ggaggttttt
     1321 cgctcggcgc cttcggattc tgtatcgggc cagcgatgcg cggcggctca ctcataacca
     1381 gtgatccgtt ccggttggca acctgtcagc taggtggccg ctacggtggt cgatcaggct
     1441 gttgcgtgag agataagctc agccgagccg gatgtttgct tccttgatca cctggctcca
     1501 caaagtcatc tgctcctgca cgaaagcccg gaattcctgc ggcgttgtgg tgcggatatc
     1561 aatattgagc tgctcaaagc ggctcatgac attaggatca cgaagcgcgg cattaagccc
     1621 gcgattgagc gcctgcacga tctcgccggg cgtgccccgt ggcacgaaaa cgccgttcca
     1681 ctcgtacgcc tcgaagcccg gcagcgtttc cgatatggga ggaatgtcag gcagactggt
     1741 gagcctgccc tttcccgtat gcgcgatggc tttgaccttg ccgccctgga taagacccat
     1801 cacggacgag ccgttggcga aaaagaattt cacttgtcct gacatcacgt cattgagtgc
     1861 aagtccgccg cctcgatagg gtacgtggct gatcttgatg ccggtccggt gccggaacat
     1921 ttccagtgac aggtgctgca acgtgccatt tccagacgat gccatgtcaa tgccgtccgg
     1981 cgctgccttg gcaagcgtaa tgacgtcggc aaccgtcttc acaggaacgg tcggcgtcac
     2041 aacgaggatg ttaggaacca gcgacacgag ggcgaccggc tcgaagtcct tgttgtagtc
     2101 gaacggcaag ttcgaataga gcgacgagtt taccgagaag gccgtcgcgt catgcaagac
     2161 ggtgtatccg tccggatcgg ccttcgccac caccgcctcg ccgattgtgc cgcccgcgcc
     2221 gccgcgattt tcgatgacga actgttggcc gagcatctcc ccgagtttgc cgaagacaat
     2281 gcgcgccgtg gtgtctgcac cgcccgcggg tggatagggc accatgacgc gcacgggccg
     2341 actgggccag gcggcttgcg cgccggccaa atgcgcaaac gacgcagttc ccaatgctgc
     2401 aagcaacagg cgccgcgtaa gattgatttc cgccatccct tcctcccgtt tttcttaagg
     2461 tcaa
//
LOCUS       DATDHO010000271         1508 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_409462, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000271 DATDHO010000000
VERSION     DATDHO010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409462"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1073
                     /locus_tag="VIY07_05255"
     CDS             <1..1073
                     /locus_tag="VIY07_05255"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HEY6381193.1"
                     /translation="GLHADCSLAFQLAGFQESIVTTNWVRRNSIWQCENGPLVDGVEA
                     DRADYAACVLGLRDYVNKNGFPGVVLGLSGGIDSALCTAMAVDALGADRVRCLMLPYK
                     FTSRESLDDAAACAKALDVRYEVLPIAPAVEGFEKALAPIFSGLPRDVTEENLQARAR
                     GTILMAVSNKFNLMVVTTGNKSEMSVGYATLYGDMNGGFNPIKDLYKTEVFRLARLRN
                     TWKPEGAKGPEGRVIPENIITRPPTAELRENQKDQDSLPPYDVLDPILERLVEREEPV
                     SAIVEAGFDRDTVMRVERMINIAEYKRRQAAPGVKVTLKNFGRDRRYPITNRFRDPGT
                     TIPAPKVSVVTGKPTKSEAFDY"
     gene            complement(1085..>1508)
                     /locus_tag="VIY07_05260"
     CDS             complement(1085..>1508)
                     /locus_tag="VIY07_05260"
                     /inference="COORDINATES: protein motif:HMM:NF022515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2865 domain-containing protein"
                     /protein_id="HEY6381194.1"
                     /translation="YTYHNPGEEMAQAVSLGGRLYTELPTAFQYRKSMSPECSCRRPG
                     ESWAQALKAIGPDDTVLPGDVVVTEQNAKQLSQPRAGPDGKPIRSDQRKPSTASPPAT
                     PSTAAAPANTPASETPPSPADPAKRSVRTVGPTFLPTR"
BASE COUNT          295 a          410 c          490 g          313 t
ORIGIN      
        1 tcggtctgca cgcggattgc tcgctggcct ttcagcttgc cggcttccag gaatcgattg
       61 tcacgacgaa ctgggtgcgt cgaaactcga tttggcaatg cgaaaatggt ccactggttg
      121 acggtgtcga agcggatcgc gccgactatg ctgcatgtgt gctcggcctt cgcgactacg
      181 tgaacaaaaa cggatttcca ggtgtcgtat tgggtttgtc gggaggcatc gattctgcat
      241 tatgcacggc gatggcggtc gacgcgctgg gggccgatcg tgttcgctgc ctgatgctgc
      301 cgtacaagtt cacgtcgcgg gaatcgcttg acgatgccgc tgcctgcgca aaagcgctcg
      361 atgtgcgtta cgaggtattg cctatcgcgc ccgcggtcga gggtttcgag aaggcgcttg
      421 ctccgatttt ttccggcctg ccacgcgatg taaccgaaga gaatctgcaa gctcgtgcgc
      481 gcggcacaat ccttatggcc gtctccaaca agttcaacct catggtggtg acgaccggaa
      541 acaagtcgga aatgtcggtc ggctacgcca ctctgtatgg cgacatgaac ggcggcttca
      601 atccgatcaa ggatctctac aagacggagg ttttccggct tgcgcggctg cgcaacacat
      661 ggaagcccga aggtgccaaa gggccggagg ggcgggtcat cccggagaac atcattacgc
      721 ggccaccgac cgcggaattg cgtgaaaatc agaaggatca ggattcgttg ccgccttatg
      781 acgtgcttga tccgattttg gagcgtctgg tcgaacggga ggagccggta tccgctatcg
      841 tggaggcagg cttcgatcgc gacacggtga tgcgggtcga acgcatgatc aacattgccg
      901 aatacaaacg gcgtcaggcg gcgccggggg tcaaggtgac gctcaagaat ttcggtcgtg
      961 atcgtcgtta tccgatcacc aaccgcttcc gcgacccagg cacgacaata cctgcgccaa
     1021 aggtttcggt tgtcacgggc aagcccacaa aatcagaagc gttcgactat tgaaggccaa
     1081 tcgactagcg agttggcaag aacgtcggac cgaccgtgcg aaccgaacgc ttggctggat
     1141 cggccgggct gggaggcgtc tcgcttgcgg gcgtgttcgc aggcgccgcg gcagttgaag
     1201 gcgtagcggg gggcgaggca gttgagggct tgcgctgatc ggatcggatc ggcttgccgt
     1261 ccggcccggc gcgtggctgg gatagctgct tggcattctg ttcggtgact acgacatcgc
     1321 caggcaaaac ggtatcgtca ggtccgatgg ccttaagcgc ttgcgcccag ctttcgccgg
     1381 gccgccggca gctacattcg gggctcatcg atttccggta ttgaaatgcg gtcggcagct
     1441 cggtgtaaag ccggccgccg agcgaaacgg cctgcgccat ttcctcaccg ggattgtgat
     1501 aggtatag
//
LOCUS       DATDHO010000272         1708 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_13117, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000272 DATDHO010000000
VERSION     DATDHO010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1708
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13117"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..1176)
                     /locus_tag="VIY07_05265"
     CDS             complement(13..1176)
                     /locus_tag="VIY07_05265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007702248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HEY6381195.1"
                     /translation="MKTKSGAAGVALALLFVAAVTSMSEAKTFVYVSNSQDGNIDAFL
                     MDTTTGALTSIGKAEAAKMVMPMAVSPSKKNLYAVVRSQPTRVLTYAIDPATGALSQK
                     ASAPLPDSMPYVSTDQAGRFLFTASYGGDKLAVSPIGENGLVESEAIQVIPTGRNAHS
                     IVPDRSNKFIYAATLGANQVLQFTLDSKTGKLTPNEPAAVSPEAGHGPRHMVVSPDNK
                     NLYVLNELSGHVTQYAIDAGKGTLTLVESINSVPAEAGLVWGAPQAPVGAAPASAPAA
                     PKDDRPKVWAADIQITPNGKFIYSTERTTNKIALFTVAPGTGKLAYVANFATEAQPRG
                     IRIDPTGQYLIAAGEKSDRLSVYKIDQGTGKLSEPNRYPAGNGANWVEIVEVQ"
BASE COUNT          326 a          508 c          499 g          375 t
ORIGIN      
        1 gtgtaccacc gctcactgca cctcgacgat ctcgacccag ttcgcgccgt tgccggccgg
       61 ataacgattg ggctcgctca gcttgccggt gccttggtcg atcttgtaga ccgacaggcg
      121 gtccgacttt tcgcccgccg caatgagata ttggccggtg ggatcgatcc tgattccgcg
      181 cggctgagcc tcggtcgcga aatttgcaac gtaggcaagc ttgccggttc caggcgcgac
      241 ggtgaacaac gcgatcttgt tggtcgttcg ctccgtcgaa taaatgaatt tgccattcgg
      301 cgtgatctgg atatcggccg cccacacttt cggcctgtcg tctttcggcg cggccggcgc
      361 agatgccggc gcggcaccga ccggcgcctg cggcgcgccc caaacaaggc cagcttccgc
      421 cggcacggag tttatgctct caacgagggt cagcgtcccc ttgccggcat cgatcgcata
      481 ctgggtaaca tgccccgaca gctcgttcag aacatagaga ttcttgttgt cgggagacac
      541 gaccatgtgg cgcggaccgt ggcctgcttc agggctgact gcggcaggct cgttcggcgt
      601 cagcttcccc gtcttgctgt cgagcgtaaa ctgcagcacc tggttggcgc cgagcgtcgc
      661 ggcatagatg aacttgttgc tgcggtcggg cacgatcgaa tgtgcattgc ggccggtcgg
      721 gatgacctgg atcgcctccg attccaccag gccgttttcg ccgatcgggc tcactgcgag
      781 cttgtcgccg ccgtatgaag ccgtaaacaa aaaccgtccc gcttggtcgg tcgaaacata
      841 cggcatgctg tcgggaagcg gcgccgatgc tttctgcgac agtgcgccgg ttgccggatc
      901 aatggcgtag gtcaacacgc gcgtcggctg cgagcgcacg acggcgtaga gatttttttt
      961 actggggctc acggccatcg gcatgaccat cttggcggcc tcggccttgc caatcgacgt
     1021 gagggcgcca gtggtcgtat ccatcaggaa ggcatcgata ttcccgtctt gcgaattcga
     1081 aacgtagaca aatgtcttgg cctcggacat cgaggttact gcggctacaa acagcagcgc
     1141 gagcgcaacc cccgccgctc cactcttcgt tttcattttc ctctcctgcc ttttggcaaa
     1201 gggcgtcttt cagccgcacc cgcgtttcca gcagaggttg cccgacgcaa aagtgcaatc
     1261 cgcgcaccct ttcgacatgt tataataaaa tcgcgggaat gaacctgctt tcttcggcag
     1321 ggatgggacg attcgtacgt tcggccgccc gcgtgtcttg aagcgcagct tatagaaatt
     1381 gtcagaaacg agccgattga tgtcattata aacttgaggt tgttatgaac gacgtccctc
     1441 acgaaaccga agacgcgatc ttctcgaatg aaatctccga tgacatcctg gaaaccgcag
     1501 cgttctcggg aaacggtcga gtgaataatt tcacccaatg gatgtgcacc gctctgtttt
     1561 tttgccccgg gccctagcgg cgagatcgga tattgcagga catacaattg cgcgatgact
     1621 gatttcaacg gcctgaccca cccgcggcga cgcggccgtc acaccacacg tttaagggcg
     1681 gtgcgcaagt tctcaagggt gcgggtga
//
LOCUS       DATDHO010000273         2795 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_211133, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000273 DATDHO010000000
VERSION     DATDHO010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2795
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211133"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /gene="purQ"
                     /locus_tag="VIY07_05270"
     CDS             complement(<1..419)
                     /gene="purQ"
                     /locus_tag="VIY07_05270"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HEY6381196.1"
                     /translation="MKAAVLVFPGINREQDMARTLRLTSGREPAMVWHADTELPSGTD
                     LVVIPGGFSYGDYLRCGAIAARAPIMDAVRAYSAQGGLVLAVCNGFQIACEAGLLPGV
                     LMRNSRLRFICRDIFLKVERSDTPFTRGYNAGQVIRVP"
     gene            complement(416..658)
                     /gene="purS"
                     /locus_tag="VIY07_05275"
     CDS             complement(416..658)
                     /gene="purS"
                     /locus_tag="VIY07_05275"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEY6381197.1"
                     /translation="MKARVTVTLKSGILDPQGKAIEGALRSLGLSGVSSVRQGKVFDI
                     EIEGGDRARAEALLKQAADKLLANTVIENYRVDLIG"
     gene            complement(917..2383)
                     /locus_tag="VIY07_05280"
     CDS             complement(917..2383)
                     /locus_tag="VIY07_05280"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEY6381198.1"
                     /translation="MNIVEPILFQARHDPPAPAMCAPGTALGIVSYARLARFIHSVGH
                     RAVRLGVAPGQVVAIHVKDHIFHAALALGFMHVGIVTVSIGASLPPGLRADVILTDEP
                     AAFANGRSTKIVAVDLSWMSGKGVPVDERHVYRGNGNDFCRIALTSGSTGEPRAVGFT
                     HNNQLARLARYNHVFGNLFPQYSRFFSDYGLGSSGGFRHILYVLSRGGTMFFPGASPM
                     ETLQTFALYRVQGLIASPGGLSGFLTFYDTNRDFPCSFDIILSAGSPLSDPLSQQVRS
                     RMGSNLIFYYGTTETSTIASAPAHALTGLAGAVGYVTPDVSVQIVDDNGNSVPANREG
                     SVCVRTPVSVRGYLDDPHQAGTPFRDGYFDTGDIGYLTDENMLVISGRKKEILNLGGD
                     KVSPRTIEDALRAFYGIRDAAAFSVANGLGIDEAWALVVPNGRLNEEALQKHCRERLA
                     QTHVPVRFINVANIPRNANGKVDRGRLNAIVQGFTAKL"
     gene            2550..>2795
                     /locus_tag="VIY07_05285"
     CDS             2550..>2795
                     /locus_tag="VIY07_05285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381199.1"
                     /translation="MKRFLLATVSMVALTSATRAADMPATPAPVADWTGIYLGIQGGA
                     VRRDALADLGFLGFRLDGSNTGGTAGAVLGYNWQHGGL"
BASE COUNT          557 a          865 c          877 g          496 t
ORIGIN      
        1 ggcacccgga tcacctgccc cgcattgtag ccgcgggtga acggggtgtc ggaccgctcc
       61 accttgagga agatgtcgcg acaaatgaac ctgagccgtg aattgcgcat cagcacgccg
      121 gggagcaggc ccgcctcgca ggcgatctgg aacccgttgc agacggcgag caccagtccg
      181 ccttgcgccg agtaggcacg gaccgcgtcc atgatcggcg cacgcgcggc aatcgccccg
      241 caccgcagat agtcgccgta ggaaaagccg cccgggatca cgaccaggtc cgtgccggac
      301 ggaagttccg tatcggcgtg ccagaccatc gccggctcgc gccccgatgt caggcgcagc
      361 gtgcgcgcca tgtcctgttc gcggttgatg ccggggaaga cgaggacggc ggctttcatc
      421 cgatcaggtc cacgcgatag ttctcgatca cggtattggc caggagcttg tcggccgcct
      481 gcttaagcag ggcttcggcc ctggcgcggt cgccgccctc gatttcgata tcgaacacct
      541 tgccctgccg cacgctggat acgccggaca gccccagcga gcgcagcgcg ccttcaatgg
      601 ccttgccctg ggggtcgaga atgccggatt tgagggttac ggtgacgcgg gctttcatag
      661 tgggttttca ggcgattcca gcctcggcga cctcacctag catccggcac acgccgcctc
      721 aaccgtgtgg acgagcacta cacaggtcag cacagaggtg ccgtttttca aggcaacaac
      781 acggtcataa accgttctca gctgtcattc cggggcgcga gcaagcgagc gaacccggaa
      841 tccagaacca aacgcggggc atacatctgg attccgggtt ccggccttcg gccggccccg
      901 gaatgacggt gaacagtcag agctttgccg tgaacccctg cactattgcg ttcaatcgac
      961 cgcggtcgac cttgccattt gcgttgcgcg gaatgttcgc gacattgatg aaccgtacgg
     1021 gaacatgtgt ctgcgcgagc ctctcgcggc aatgcttttg caaggcctcc tcgttcagcc
     1081 ggccgttcgg cacgacgagt gcccaggcct cgtcgatgcc aagcccattc gcgacgctga
     1141 acgccgccgc atcgcggatg ccataaaacg ccctcagcgc atcttcgatc gtccgcgggc
     1201 tgaccttgtc gccaccgaga ttcaagatct ctttcttgcg cccgctgatg accagcatgt
     1261 tctcatcggt gagataaccg atatcgccgg tatcgaaata tccatcgcgg aatggcgttc
     1321 ctgcttgatg cggatcgtca agatagcccc tcacgctgac aggggtgcgg acgcataccg
     1381 agccttctcg atttgccggc acgctattcc cgttgtcgtc gacgatctgc accgacacgt
     1441 caggcgtgac atatccaacc gcgcccgcca gcccggtcaa ggcgtgagcc ggtgcagacg
     1501 cgatggtcga ggtttcggtc gtcccgtagt aaaagatcag gttcgagccc atgcgcgagc
     1561 gcacctgttg cgacaatgga tcggacagcg ggctgccggc cgagagaata atgtcgaagc
     1621 tgcagggaaa gtcgcggttg gtgtcataaa aggtcagaaa accgctgagg ccacccggcg
     1681 acgcgatcag gccctgcacc ctgtaaagcg cgaaggtctg caatgtttcc atcggcgagg
     1741 cgccgggaaa aaacatcgtc ccgccacgcg acaacacgta gaggatatgc cggaagccgc
     1801 cactggagcc gagaccatag tcgctgaaga aacgcgaata ctgcggaaag agatttccga
     1861 aaacgtgatt gtagcgcgcg agtcgagcga gctggttgtt gtgcgtgaat ccgaccgccc
     1921 ttggttcgcc ggttgacccg gacgtcagcg cgatgcggca aaagtcgttg ccgttgccac
     1981 gatagacgtg gcgttcgtcg acaggcacgc ccttgcccga catccacgac aggtcgaccg
     2041 cgacaatctt cgtgctccgc ccattggcga acgccgcggg ctcgtcggtg aggatcacat
     2101 cggcccgcag tcccggcggc aggctcgcac cgattgatac ggtgacaata ccgacgtgca
     2161 tgaaccccaa tgcaagcgca gcgtgaaaaa tgtgatcctt gacgtggatg gcgacgacct
     2221 gcccgggtgc aacgccgaga cgcacggcac ggtgcccgac gctgtgaatg aagcgcgcaa
     2281 gcctggcgta gctgacgatg cccagcgcag tgccgggcgc acacatggcc ggtgccggcg
     2341 gatcatgcct tgcctgaaag agaatcggtt cgacgatatt cattggaagt tccgtcgttg
     2401 gccgcacgcg acgttgcggc tcaacgttgc ggatacgcca catacgccgt gggaaacgca
     2461 gccgcgtcat ccgatcagat gacgcagcac gaaaagcaac atggcaagca agcaaaccgg
     2521 actcagcggg gcgaacaagg ttgctgccaa tgaaaagatt tttgctcgca acggtgtcga
     2581 tggtggcgct gacgagcgct actcgcgcgg ccgacatgcc ggcgacgccc gctccggtgg
     2641 cggactggac cggcatttat cttggcattc agggcggcgc cgtgcgtcgc gacgcgctgg
     2701 ctgatcttgg gttcttggga tttaggctcg acggcagcaa caccgggggc accgcgggtg
     2761 ctgtgctggg ttacaactgg cagcacggcg gcttg
//
LOCUS       DATDHO010000274         1535 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_211255, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000274 DATDHO010000000
VERSION     DATDHO010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211255"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..830)
                     /locus_tag="VIY07_05290"
     CDS             complement(<1..830)
                     /locus_tag="VIY07_05290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY6381200.1"
                     /translation="MLVVGAIAAISAVIPSARAQDAVTLHGAVQFNDDHAFNRALLRF
                     EALVKQYYGKPINFVLHRNSELGLEKEYFAYMNQGISVDYAIVSPAHMSTFSKAAPFI
                     DAPFLFRDLDHWNKVLDADLLKPIADEIAQKADVMLIGYAGGGVRNIFANRPVRNLAE
                     MKGLKVRVQGAPIWSRTFTAAGMSPTVIAYNEIYNAIQNGVIAAGENEAAGVEQMKFY
                     EVGPNLNMTQHAITIRPLCFSTKTFNKLPKDLQAAVLKAGKEAGAYGRQVESSEDTAK
                     L"
     gene            complement(1184..>1535)
                     /locus_tag="VIY07_05295"
     CDS             complement(1184..>1535)
                     /locus_tag="VIY07_05295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381201.1"
                     /translation="HPLRTGMIPPQLPGSPSYLRPGTPAIAKVLLDLGYTLIERLNVL
                     NIGRNLMRTLSILIAAVAVLSLSSTFTATQAATTAGVTSTQSTTNTTQVFAAKKKYKK
                     YGHCPPGQAKKFRC"
BASE COUNT          283 a          452 c          459 g          341 t
ORIGIN      
        1 agcttggcgg tgtcctcgct cgactcgacc tgccggccgt aggcgcccgc ttccttgccg
       61 gccttcagga ccgcggcttg caaatccttc ggcagcttgt tgaaggtctt ggtcgagaag
      121 cagagcggcc ggatcgtgat cgcgtgctgc gtcatgttga ggttcggacc gacctcgtag
      181 aacttcatct gctcgacgcc cgcggcctcg ttctcgcccg ctgcgatgac gccattttgg
      241 atggcgttgt agatctcgtt ataggcaatc acggtcggcg acatcccggc cgccgtgaag
      301 gtgcggctcc agatcggcgc gccctgcacg cgcactttga gccccttcat ctcggcgagg
      361 ttgcgaaccg gccggttggc gaaaatgtta cgcacgccgc cgcctgcata gccgatcagc
      421 atcacgtccg ccttctgcgc gatctcgtcg gcgatcggct tgagtagatc ggcgtcgagc
      481 accttgttcc aatggtctag gtcgcggaac aggaacggcg cgtcgatgaa cggagcggcc
      541 ttcgagaagg tcgacatgtg cgccggtgac acaatggcgt agtcgaccga gatgccctgg
      601 ttcatgtagg cgaagtattc cttctccagc cccagctcgc tgttgcggtg gagtacgaag
      661 ttaatcggct tgccgtagta ttgcttgacc agcgcttcga atctgagcag cgccctgttg
      721 aaggcgtgat cgtcgttgaa ctgaaccgca ccgtgcagcg tcaccgcgtc ctgggcgcgc
      781 gcggacggga tgacggcgga aatggctgcg atagcgccga caacgagcac cgttcttagc
      841 gtgctggaca ttgcatcctc cccggatcgt gttctcgttt ggtagcagat agtacgccgg
      901 tgccgctcct tgtccacggt gatgtgatga aacccgccga caactgcgga ccaaatttcc
      961 gtaattcagg ctgatgtccg cgttgcgagc gctattcaat cacctcatca gcaaggggca
     1021 gcaacctggc atgcccgcgg taacgccagc gaaaggcaga tttatgcggc tgacgggtcg
     1081 gattcttttg cgaccatgtc cgctttgggc caatagcgga catcatcatt gtccctgctt
     1141 caaatccagc cagcgcaatg cacgcctttt tcgcctgcgc agactagcaa cggaacttct
     1201 tcgcttgacc cggagggcaa tggccatact ttttgtattt cttcttcgcc gcaaaaactt
     1261 gtgtcgtatt agttgtgctt tgggtgctag tcaccccagc tgttgtagcc gcttgcgtcg
     1321 cagtgaaggt cgaactcaac gaaagcacgg ctaccgctgc aattaggatg ctcagggtgc
     1381 gcattaaatt cctcccaatg ttcaggacgt tcaatcgctc aatcaacgtg tagccgaggt
     1441 cgagcaggac cttggcgatc gccggagtgc cgggtcgcag gtaagacgga ctgcccggca
     1501 actgcggcgg aatcatgccg gtccgcagcg gatgc
//
LOCUS       DATDHO010000275         2729 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_211264, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000275 DATDHO010000000
VERSION     DATDHO010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2729
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211264"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..463)
                     /locus_tag="VIY07_05300"
     CDS             complement(<1..463)
                     /locus_tag="VIY07_05300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase family protein"
                     /protein_id="HEY6381202.1"
                     /translation="MNPLKELLGQGQSVWLDYIRRDLIRTGELKRLVEEDGIRGVTSN
                     PTIFEKAIAGSTDYDDALRALHAKDAKANARNLYEGLAIEDIQMTADVLRPVYDQTEG
                     ADGYVSFEVSPHLAHETQGTINEAKRLREAVDRPNVMIKVPATREGIPAIEE"
     gene            complement(475..933)
                     /gene="rpiB"
                     /locus_tag="VIY07_05305"
     CDS             complement(475..933)
                     /gene="rpiB"
                     /locus_tag="VIY07_05305"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018097878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEY6381203.1"
                     /translation="MRIAIGADHAGFALKQELGSYLHELGHAVIDLGTMNKVPVDYPD
                     YAAAVAGAILEGQAERGVLICGSGVGASVAANKLPGIRAAVCHDTYSARQGVEHDDMN
                     ILVLGARVVGAELARELVRSFLSATFTGEERHVRRLAKIKALEQRFKTLT"
     gene            complement(937..>2729)
                     /gene="tkt"
                     /locus_tag="VIY07_05310"
     CDS             complement(937..>2729)
                     /gene="tkt"
                     /locus_tag="VIY07_05310"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEY6381204.1"
                     /translation="QIQQFRQWDSRTPGHPERGLTPGVETTTGPLGQGFGNGVGMAIA
                     ETYLAARYNRSGFAIVNHFTYGIVSDGDLMEGVAAEAASLAGHLKLGKLVYLYDNNHI
                     SLAAATDLTFTEDCAKRFEAYGWHTQTVEDGNDLEAINRALGAARNETGRPSLVLVRT
                     HIGYGSPGKQDTFEAHGSPLGAEEVKRTKQKLGWLAEPPFLVPQEALARFHESVSRGE
                     KAEAEWKEKFSAYAQKFPELAREFEETMRGQLPKGWDEGIPDFPPDPKGLATRAASGK
                     VLNAIAPKLPTLIGGSADLNPSTFTVLQNLGDFESPERECSDSQGSAGGGWSYAGRNL
                     HFGVREHGMAAALNGMAAHGGIIPFGSTFLMFSDYMRPAIRLAALMELGVIYVFTHDS
                     IGLGEDGPTHQPIEQLAALRAIPQLVVIRPADANETVVAWRVAIESRDRPVALALTRQ
                     NVPTLDRRQLAAAEGLRRGAYVLADAPNGKPDLILIGTGSEVALVVAARQKLAEQNIQ
                     ARVVSMPSWELFELQPREYRESVLPRSIRPRLAVEAALPQGWHRYVGDGGDVVGLDRF
                     GASAPGNVVMEKLGFTVDNVVERALRLMGK"
BASE COUNT          501 a          886 c          772 g          570 t
ORIGIN      
        1 gctcttcgat cgccggaatc ccctcgcgag tcgccgggac tttgatcatg acattgggcc
       61 ggtccactgc ctcccgcaaa cgcttcgcct cgttgatggt tccctgggtc tcatgggcga
      121 gatgcggcga aacttcgaag ctgacgtagc cgtcggcacc ctcggtttgg tcataaacag
      181 gccgcagaac gtccgctgtc atttgaatat cctcgatggc aagtccttcg tagagattcc
      241 gcgcgttcgc ttttgcatcc ttcgcgtgca acgcgcgcag cgcatcgtca tagtcggtgc
      301 tgccggcgat cgctttctca aaaatcgtcg gattgctggt gacgccgcga atgccatcct
      361 cttccaccag ccgtttcaac tcgccggtgc gaatgagatc gcgccggata tagtcaagcc
      421 agacggactg gccctgcccc aatagctctt tcagagggtt catgagcatt ctccttacgt
      481 caacgttttg aagcgttgtt ccaaagcttt aatcttcgcc agacggcgaa cgtggcgctc
      541 ctcccctgtg aacgtcgctg ataaaaaact ccggaccagt tcgcgcgcca actccgcgcc
      601 gaccacgcgt gctcccaaaa ccagaatgtt catatcgtcg tgttcgactc cttgccgcgc
      661 ggaataggta tcatggcata ccgccgcccg aatgcccggc agcttgttcg ccgccaccga
      721 tgcgccaacg ccgctgccgc agatgaggac gcctcgctcc gcctggcctt cgaggatcgc
      781 tccggccaca gctgccgcat agtcgggata atccaccgga actttattca tagtgccgag
      841 gtcgattaca gcgtgaccca gctcgtgcag gtagcttccc agctcttgtt tgagcgcgaa
      901 tccggcgtga tccgcgccga tggcgattcg cattggctat tttcccatta gcctcaaggc
      961 ccgttccacg acgttgtcca cggtgaagcc gagcttttcc atcactacgt ttcccggcgc
     1021 cgatgcgccg aatcgatcca gccccaccac gtcgccgccg tcgccgacgt agcgatgcca
     1081 gccctggggc agagccgctt caaccgcgag tcgcggccga atcgatcgcg gcaaaaccga
     1141 ctcccgatac tcgcgcggct gcagctcgaa caattcccag ctcggcatag aaaccacgcg
     1201 cgcctggata ttttgctccg ccaatttttg ccgcgccgcc acgaccagag ccacctccga
     1261 acccgtgccg atcaaaataa ggtcgggctt tccgttcggc gcgtcagcca aaacgtacgc
     1321 gccccgtcgc agcccctcgg ctgcggcgag ttgacgccga tccaaagtgg ggacgttctg
     1381 gcgggtcaat gccagcgcca ccgggcggtc gcgcgactcg atggcgaccc gccatgcaac
     1441 aaccgtctcg ttggcatcgg cggggcgaat gacaaccagc tgcggtatgg cgcgcaaggc
     1501 ggcgagttgc tcaatgggct gatgcgtcgg gccatcttct ccgagcccaa tgctatcgtg
     1561 ggtgaagacg tagatcacac ccagctccat cagcgccgcc agccgaatcg cgggacgcat
     1621 ataatcggag aacatgagga acgtcgagcc gaaagggatg atcccgccgt gggccgccat
     1681 gccgtttagt gcggcggcca tgccgtgctc gcgcacgccg aagtgtaagt tgcggccggc
     1741 gtagctccag cctccgcccg ctgagccttg gctgtcgctg cactctcgct cgggactttc
     1801 aaaatcgccc aggttttgca acacggtaaa cgtcgatgga ttcaaatctg ccgagccgcc
     1861 gatcaatgtc ggaagcttcg gggcgatggc gttgagcact tttcccgatg cggcccgcgt
     1921 agccaaccct ttggggtcgg gagggaaatc aggaatccct tcatcccaac cctttggcaa
     1981 ctggccgcgc atggtttcct cgaactcgcg cgccagctcg ggaaatttct gcgcataggc
     2041 tgagaatttt tccttccatt ccgcctcggc tttttctccc ctgctgacgc tttcgtggaa
     2101 gcgcgccagc gcctcttggg ggaccaagaa cggcggctcc gccagccagc cgagcttttg
     2161 cttggtccgc tttacttcct ctgcgcccag cggcgacccg tgggcctcga aagtatcttg
     2221 ctttcccggc gatccgtaac cgatatgcgt gcgcaccaga acgagcgagg gccggccggt
     2281 ctcgttgcgc gctgcgccaa gcgcgcgatt gatggcttcg agatcgttgc catcctccac
     2341 cgtttgcgtg tgccacccat aagcctcaaa tcgttttgcg caatcttcgg tgaaggtaag
     2401 atccgtcgca gccgcgagcg agatgtggtt gttgtcgtaa agataaacca gcttgcccaa
     2461 tttaagatgg ccggcgagac tggcggcttc ggcggcgaca ccttccatca ggtcgccatc
     2521 gctgacgatt ccataggtga agtgattgac gatcgcgaat cccgaccggt tatagcgtgc
     2581 cgctagataa gtttcggcga tcgccatacc gactccgttg ccgaagcctt gacccaaagg
     2641 tcccgtcgtc gtctcaactc ccggagtcaa accgcgctcg ggatgtccgg gggtgcggct
     2701 gtcccactgg cggaactgtt ggatctgtt
//
LOCUS       DATDHO010000276         4588 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_60990, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000276 DATDHO010000000
VERSION     DATDHO010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4588)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4588)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4588
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_60990"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..926)
                     /gene="hemH"
                     /locus_tag="VIY07_05315"
     CDS             complement(<1..926)
                     /gene="hemH"
                     /locus_tag="VIY07_05315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEY6381205.1"
                     /translation="MRPDKGPVLSGRIGVLLINLGTPDSTGYWAMRRYLKEFLSDRRV
                     IEENRLKWWLVLNLIVLTVRPGRKGRDYDKIWNRERNESPLKTITRAQSDKLDDIFDK
                     VDKRIRVDWAMRYGNPSIRSRLEALAEQDCERILIVPLYPQYSAATTATVCDEAFRAL
                     KRMRSQPTLRIAAPYYAELVYIDALAASLNAELAKLPFRPEAIIASYHGMPESYVTKG
                     DPYLKHCTETTALLRKKLKLDDKRLIMTFQSRFGTAEWIKPYTDATVKSLAERGVKNL
                     AVITPGFSSDCLETLEEIAMENAEIFRHAGGE"
     gene            complement(923..2152)
                     /locus_tag="VIY07_05320"
     CDS             complement(923..2152)
                     /locus_tag="VIY07_05320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6381206.1"
                     /translation="MPEHYDALETRDPVAREREQFARLSEIVARAMSAPGWAKHLEGI
                     DPKSVTSRASLATLPVMRKSDLATLQKAHPPFGGLNTTAPGRVRRLLMSPGPIFEPEG
                     EGADWWGAARALHAAGFRAGHIVHNSFAYHLTPGGFILESGAHALGCAVIPGGVGNTE
                     QQLDAIAHYRAEGYVGTPDFLKILLDTAQSTGKDASSIKRALVSGAALPASLRQELGH
                     RGVAVLQCYATAELGVIAYESDARDGMIVNETVIVEIVRPGTGDPVPEGEVGEVVVTS
                     FNPDYPMIRFGTGDLSAVMPGVSPCGRTNARLRGWMGRADQTAKVKGMFVHPKQIAEL
                     ASRHPELKRLRLVVGREAEQDYMTLLAESATSDAALESAIAANLQSITKLKGIVKLVA
                     PGSLPNDGKIISDERKS"
     gene            complement(2156..2998)
                     /locus_tag="VIY07_05325"
     CDS             complement(2156..2998)
                     /locus_tag="VIY07_05325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009756455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381207.1"
                     /translation="MSAIEQSPATTAKSQIILSVNNIEVIYDHVILVLKGVSLDVPRG
                     GIVALLGANGAGKTTTLKAISNLLHAERGDVTKGSIVFEGAEVQDLSPNELVRRGCIQ
                     VMEGRHCFGHLTIEENLLTGAFTRRDGKAAIKHDLDLVYSYFPKLGERKSSLAGYTSG
                     GEQQMCAIGRALMSRPKMILLDEPSMGLAPQIVEEIFGIVKNLNEKEGVSFLLAEQNT
                     NMALRFARYGYILENGRVVMDGEATTLAENEDVKEFYLGISEGRRKSFREGKHYRRRK
                     RWLA"
     gene            complement(3069..4403)
                     /locus_tag="VIY07_05330"
     CDS             complement(3069..4403)
                     /locus_tag="VIY07_05330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381208.1"
                     /translation="MKARHFLVGVTCASLVGAAVLVSQAQAQDSIYVPLLTYRTGPYS
                     GSGIPIANGMHDYLAMLNERDGGIGGVKLNVEECETGYDTKKGVECWESIKGKKPAVV
                     NPYSTGITLQIIPKAAVDKIPILSMAYGLSASAVGKDFPWVFNPPATYWDGLSMVMRY
                     IGGKEGGLDKLKGKTIGFIFLESPYGREPLPLLQQFAKDYGFTVKEYSVAGKEMQDQS
                     AQWLAVRRDRPAWMIMWGWGAMNPTAVKRAAENGFPMDHFIGIWWSGSDDDGRGGGQE
                     AKGYLTLNFNGLGSNYPALQDIKKHVVDKGKSQVEKDKFAENFYNRGVYNSVLVAEAI
                     RNAQKLSGKKVVTGEDVRRGLETLNISDARWKELGLPGFGAPISGVNCTDHNGHAPAY
                     MQQWDGAKWVKVSDWIQPMRDKVRPMLEEAAKEYVEKNAGWPKRTEACDKSS"
BASE COUNT          889 a         1422 c         1296 g          981 t
ORIGIN      
        1 ctttccccgc cggcatgccg gaagatctcg gcattctcca tggcgatctc ctcgagggtc
       61 tcaaggcaat ctgaggaaaa tccgggcgtt ataacggcaa gattcttcac gccgcgttcg
      121 gcaagcgact tcaccgtggc atcggtgtaa ggcttgatcc actccgcagt gccgaagcgc
      181 gattggaagg tcatgatcag acgcttgtcg tcgagcttca gcttcttgcg cagcaatgcc
      241 gtcgtctcgg tgcaatgctt gagatacgga tcgcctttgg tcacgtaact ctccggcatt
      301 ccgtgatagg acgcgatgat cgcctcgggc ctgaacggaa gcttcgcaag ctccgcattc
      361 agggaagctg ccaaagcatc gatgtagacc agctcggcat agtaaggcgc ggcgatgcgt
      421 agcgtgggct gggagcgcat gcgctttagc gcgcgaaacg cttcatcgca gacggtagct
      481 gtcgtcgccg cggagtactg cgggtagagg ggaacgatca ggatgcgctc gcaatcctgc
      541 tcggcaagcg cctccagacg cgaacggatc gacggattgc cataacgcat cgcccaatcg
      601 acccggattc gcttatccac cttgtcgaaa atgtcgtcga gcttgtcgga ctgggcgcgc
      661 gtaattgtct tgagcggaga ttcgttccgc tccctgttcc agatcttgtc gtagtcgcgg
      721 cctttgcggc caggtcgaac ggtcaagacg atcaaattga ggacaagcca ccatttcagg
      781 cggttctctt cgatcacgcg acgatcggaa agaaattcct tcaggtatcg gcgcatcgcc
      841 caatagccgg tcgagtccgg cgtaccgaga tttatcagga gaacgccgat ccgaccgctg
      901 aggaccggac ctttatccgg cctcatgact tgcgctcatc ggagatgatc ttgccgtcat
      961 tcggcagcga gcccggcgca accagcttga cgatcccttt gagcttggtg atcgactgca
     1021 gattggcggc aattgcgctt tcaagagctg catccgacgt agcgctttca gccagcaagg
     1081 tcatgtaatc ctgttccgcc tcgcgaccga cgaccagccg caggcgcttg agctcgggat
     1141 ggcgagaggc cagttcggcg atctgctttg gatgaacgaa catgcccttc actttcgctg
     1201 tctggtcagc gcgccccatc cacccccgta gacgggcatt ggtgcgcccg catggagaaa
     1261 cccctggcat gacagccgaa agatcgcccg taccgaaccg gatcatcgga taatccggat
     1321 taaaggaggt gacgacgacc tctcccacct cgccctccgg caccggatca cctgtaccgg
     1381 gccgaacgat ttcgacgatc acggtctcat tcacaatcat gccatcgcgc gcgtcgcttt
     1441 cgtaggcaat caccccgagt tcggcggtgg catagcattg caatacggca acgccacggt
     1501 ggccgagttc ctgacgcagg gaagccggca gcgcggcgcc ggagacaagc gcgcgcttga
     1561 tggaggacgc gtctttcccg gtgctttgag ccgtgtcgag caggatcttg aggaagtccg
     1621 gcgtgccgac atatccctcg gccctatagt gcgcgatcgc atccagttgc tgctcggtat
     1681 tgccgacgcc gcccggaatg acagcgcagc caagcgcgtg cgcacccgat tcaagaatga
     1741 agccgccggg cgtgaggtga taggcaaacg aattatgcac gatatgaccg gcacgaaacc
     1801 cggccgcatg aagagcgcgc gcggctcccc accagtcggc gccctcgcct tcaggttcga
     1861 agatcggccc cggtgacatc agcaaccgcc ggaccctccc cggcgcggtg gtattcagcc
     1921 cgccaaacgg gggatgcgcc ttttgcagtg tcgcaaggtc cgacttgcgc atcaccggca
     1981 acgtcgccag cgacgcacgc gatgtgaccg atttgggatc gatgccctca aggtgcttgg
     2041 cccacccggg cgcactcatg gcgcgcgcga ctatttcgct tagccgcgcg aattgttcgc
     2101 gctcgcgcgc gacgggatca cgggtttcca acgcgtcgta atgttccggc atggcttacg
     2161 ccagccacct cttccgccgc cggtaatgct tgccttcgcg gaacgatttg cgccgacctt
     2221 ctgaaatgcc gaggtagaat tccttgacgt cttcgttctc ggcgagcgtc gtcgcctcgc
     2281 catccatcac gacgcggccg ttctccagaa tatagccgta acgcgcaaag cgcagcgcca
     2341 tattcgtgtt ctgctccgcc aaaagaaaag acacgccttc cttctcattg aggttcttca
     2401 cgattccgaa aatttcctca acaatttgcg gcgcaagccc cattgacggt tcgtcgagca
     2461 ggatcatctt tggccgggac atcaacgcgc ggccgattgc acacatttgc tgctcgcccc
     2521 ccgacgtata gcccgcaagc gaacttttcc gttcgccgag cttgggaaaa tacgaataga
     2581 ccaggtccag atcatgtttg atcgctgcct tgccgtcacg gcgggtgaat gcgcccgtga
     2641 gcaggttctc ctcgattgtg agatggccga agcagtgccg tccttccatc acctggatac
     2701 agccgcgccg caccagttcg tttggggaaa ggtcctggac ttcggcgcct tcgaatacga
     2761 tcgaaccttt ggtgacatca ccacgctcgg catggagcag attggagatt gctttcagcg
     2821 tcgttgtctt tccggcgccg ttggcgccaa gcagggcaac gatgcccccc cttggaacgt
     2881 cgagggaaac tcccttgagc acaaggataa cgtggtcgta gatcacctcg atattattta
     2941 ccgagaggat gatctggctt ttggcggtcg ttgccggact ttgctcgatg gcggacatcg
     3001 gcccatcgct ccgaacagag gaagcctctc tccacgaagg agagaggctc gtttgtcaac
     3061 gcatcaagtt acgatgactt gtcacacgct tcagtgcgct tcggccagcc ggcgttcttt
     3121 tcgacgtatt ctttggccgc ctcttcaagc atcggtcgca ccttgtccct catgggctgg
     3181 atccagtcgg agaccttgac ccacttggcg ccgtcccact gttgcatgta agcgggcgcg
     3241 tggccgttgt gatcggtgca attgactccg gagattggcg ctccaaagcc aggcaagccg
     3301 agttctttcc agcgcgcatc gctgatgttg agcgtctcga ggccgcgccg gacatcctcg
     3361 ccggtcacga ccttcttgcc cgacagtttc tgcgcgttgc ggattgcttc ggcgaccaga
     3421 acggagttgt agacgccgcg gttgtagaaa ttctccgcga acttgtcctt ctcgacctgg
     3481 ctcttgccct tgtccacgac gtgtttcttg atgtcctgga gcgcgggata gttcgagccg
     3541 agtccgttga agttgagcgt gaggtaccct ttggcctcct ggccgccgcc acgcccatca
     3601 tcatccgacc ccgaccacca gatgccgatg aaatgatcca tgggaaagcc gttctcggcc
     3661 gcgcgtttga ccgccgtcgg attcatcgcg ccccatcccc acatgatcat ccacgccgga
     3721 cgatcgcggc ggacggcgag ccattgcgcc gactggtcct gcatttcctt gccggcaacc
     3781 gaatactcct tcaccgtgaa gccatagtcc ttggcaaact gctgcaacag cgggagcggt
     3841 tcgcggccat acgggctttc caggaaaata aagccgatgg tctttccctt gagcttgtct
     3901 aggccgcctt ccttgccgcc gatgtagcgc atgaccatcg acaaaccgtc ccagtaggtg
     3961 gccggcggat tgaacaccca ggggaagtct ttaccgactg ccgatgccga caagccgtag
     4021 gccatcgaca ggatcgggat cttgtcgact gcagccttgg ggatgatctg caaagtgatg
     4081 ccggtcgaat aaggattcac cacggccggc ttcttgcctt tgatcgattc ccagcactca
     4141 acccccttct tggtgtcgta gccggtttcg cattcttcaa cattgagctt cacgccgcca
     4201 atgccgccgt cgcgctcgtt gagcatggcc aaataatcgt gcatgccgtt ggcgatcgga
     4261 atgcctgagc ccgaatacgg ccctgtacgg taggtcagca acggcacata aattgaatcc
     4321 tgcgcctgcg cctggctgac gagcacggct gctcccacca ggctcgcgca ggtcacaccg
     4381 accaaaaaat gtcttgcctt catcatgttc ctcccttcgt tcacgcccgg cggcgcacgt
     4441 ctggtttata aatctcgccc tgtccgactt ggcgaaaagg cgattttcag agccatggcc
     4501 tctgccatgg tcgaagtggg tctattttgc actatcaata aggaaacggc cacaccctca
     4561 gtttttgctt gccaatctgc cacaggcg
//
LOCUS       DATDHO010000277         2735 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_457194, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000277 DATDHO010000000
VERSION     DATDHO010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457194"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..689
                     /locus_tag="VIY07_05335"
     CDS             <1..689
                     /locus_tag="VIY07_05335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY6381209.1"
                     /translation="ADVAHELRNPLTSLRSAVETLPLAKTDQSRQRLLAVIGHDVKRL
                     DRLISDISDASRLDAELQRQEAAPVDFARLLDALVKAANEIRTDDVNVTLSFEGSPLQ
                     NFKVPGHDSRLGQVISNLVDNARSFSPPGATVRITCRRLRDRVEVLVDDDGPGVQPEA
                     LEKIFERFYTDRPEQGFGQNSGLGLSISKQIIEAHGGTIWVENRTSVAGGHDRPRILG
                     ARFIVRLPAT"
     gene            689..1144
                     /locus_tag="VIY07_05340"
     CDS             689..1144
                     /locus_tag="VIY07_05340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphatase C-terminal
                     domain-containing protein"
                     /protein_id="HEY6381210.1"
                     /translation="MDRANSTIHATAVLTGAKATLIRGPAGSGKSELAWSLVTAGARG
                     LLPLARLVADDRAFVEARSGRLLVRPAPELAGRIEIRGVGIRRIEFEPIAVVGLVVDL
                     DAKDAGRLPEQKAANTEICGVRLPRLAVAAGMPALPLVLAVHRTTPTGD"
     gene            1382..1783
                     /locus_tag="VIY07_05345"
     CDS             1382..1783
                     /locus_tag="VIY07_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEY6381211.1"
                     /translation="MIGLVLVTHGRLAIEFRSALEHVVGPQRQIEAITIGPDDDVEQC
                     RKNILEAVKRVDSGEGVAILTDMFGGTPSNLAISVMSQPKVEVLAGINLPMLIKLAKI
                     REICPLQEAVAAAQEAGRKYCTIASRVLNGK"
     gene            1780..2079
                     /locus_tag="VIY07_05350"
     CDS             1780..2079
                     /locus_tag="VIY07_05350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEY6381212.1"
                     /translation="MSPRASADDNPVVREVEIVNKKGLHARASAKFVQTAEKFDAAIT
                     VTRGHETVGGTSIMGLMMLAAAPGVTITIKAIGKDAAVAVETLCKLVADGFGEED"
     gene            2203..>2735
                     /locus_tag="VIY07_05355"
     CDS             2203..>2735
                     /locus_tag="VIY07_05355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HEY6381213.1"
                     /translation="MTAAKPKTKAGDYVVKDISLAAWGRNEINIAETEMPGLMATREE
                     YGSQQPLRGARIAGSLHMTIQTAVLIETLTHLGADVRWASCNIYSTQDHAAAAIADAG
                     VPVFAVKGESLKDYWDYTHRIFEWHDGGGPNMILDDGGDATLLLHLGMQAESNAGVLE
                     HPGNEEEEVLFAAIKKRL"
BASE COUNT          573 a          843 c          832 g          487 t
ORIGIN      
        1 ctgccgacgt ggcgcatgaa ctgcgcaatc ccctcacctc gctgcgctca gccgtggaaa
       61 cgctgccgct ggcgaagacc gaccaaagcc gccagcgtct gctcgccgtc atcgggcatg
      121 atgtcaaacg gctcgaccgg ctgatttcgg atatctccga cgccagccgg cttgatgccg
      181 aactgcagcg acaggaagcc gctccggtcg atttcgccag gttgctcgat gcgcttgtca
      241 aagccgccaa cgaaatccgc actgacgacg tcaatgtgac cctgagtttc gaaggcagcc
      301 cgttgcaaaa tttcaaggtt ccgggccatg actcgcggct tggccaggtc atcagcaacc
      361 tggtcgacaa tgcacgctcg ttctcgccgc ccggcgccac cgtgcgcata acctgccggc
      421 gtctgagaga tcgggtcgaa gttctggtgg atgacgacgg cccaggcgtg cagccggaag
      481 cgctggagaa aattttcgaa cgcttctaca ccgaccggcc ggaacagggc ttcggacaaa
      541 actccggcct cggcctgtcg atctccaagc agattatcga agctcatggc ggcaccatct
      601 gggtggaaaa tcgcaccagc gttgcaggtg gccatgacag gccccgcatc ctcggcgcgc
      661 gctttatcgt ccgattgcca gccacttgat ggaccgcgcc aactccacca tccacgccac
      721 agccgttctc actggcgcaa aggccacgct gatccgtgga cctgctggct ccggcaaatc
      781 ggaacttgcg tggagtctcg tcacggccgg cgcgcgaggt cttttgccat tggcgagact
      841 ggtcgccgat gaccgcgcat ttgtggaagc ccggtcgggc cggctgctgg tccgccccgc
      901 ccccgaactg gccggacgaa tcgaaatccg cggagtcggc atccgccgca tcgaattcga
      961 gccgatcgcg gtcgtgggac tggtcgtgga tctcgatgcc aaggatgcag gcaggctccc
     1021 cgagcaaaag gccgcaaata ccgaaatctg cggggtccgg ttgccgcgac tggcggtcgc
     1081 agccggaatg ccggctttac cgctggtgtt ggctgtccac cgcaccaccc cgacgggcga
     1141 ttgaccggca ccagatggtt gggttacccc gacaccccga acgatcagaa aattaaccat
     1201 acagggccta ggatcgcggc cgcccaaaaa caagcacgca ccgagccccc ttttggcccc
     1261 gtctttccgc agtgcagcag aacgcctata tactggtcga agcccttgca atggggcctc
     1321 agatgggcct gaatgtgcgc cctttcgtgc ggtgcagcgt agcgcccgcg aggagttagg
     1381 gatgatcggc ctcgtacttg tgacccatgg gcggctcgct atcgagttcc gctcagcgct
     1441 ggaacacgtg gtagggcctc agcgccaaat tgaggcaatc acgatcgggc ccgacgatga
     1501 cgtcgagcaa tgtcgcaaga acattcttga agcggtgaag cgtgttgaca gcggcgaagg
     1561 cgtagcgatc ctgaccgaca tgttcggcgg gactccgtcc aacctggcga tctccgtcat
     1621 gagccagcca aaggtcgagg tgctggcggg tatcaatcta ccgatgctga taaagttggc
     1681 caaaatccgc gagatttgcc cattgcagga agcggttgcg gccgctcagg aagccggccg
     1741 caagtactgt acgattgcca gccgggtcct caacggtaaa tgagcccacg cgcgtcagcg
     1801 gacgacaacc ccgtcgtgcg cgaagtagaa atcgtaaaca agaaaggtct gcacgcgcgc
     1861 gcttcggcga aattcgtgca gactgccgaa aaattcgatg ccgccatcac cgtgacccga
     1921 ggtcacgaaa ccgtgggcgg tacatcgatc atggggctga tgatgctggc cgcagctccc
     1981 ggcgtcacca tcaccatcaa ggcgatcggc aaggacgcag cagtggcggt cgagacgctg
     2041 tgcaagcttg tagctgacgg atttggcgaa gaagactaga gaggatcagc gcctctcctt
     2101 cacataaaga aatctttata tatgcgttgc gaggttgccg tcggcctgtt atagccacgg
     2161 gccagccaac caccgccaat tcgtgtctgt agaaggattg ccatgaccgc tgccaagcca
     2221 aagacgaagg ccggcgacta cgtcgtcaaa gacatttcgc tcgcggcctg gggccggaac
     2281 gagatcaata ttgctgaaac cgagatgccc ggtttgatgg cgacgcggga ggagtatggg
     2341 tcgcagcagc cgttgcgcgg cgcgcgaatc gccgggtcgc tccacatgac gatccagacc
     2401 gcggttctca tcgagacgct gacgcatctt ggcgccgatg tgcgctgggc gtcctgcaac
     2461 atctactcga cccaggatca tgctgccgca gccatcgcag atgccggcgt gccggtattc
     2521 gcggtcaagg gcgagagcct gaaagactat tgggattaca cgcaccgcat tttcgagtgg
     2581 cacgacggcg gcggacccaa catgattctc gacgatggcg gcgatgcaac gctgctactc
     2641 cacctcggca tgcaggccga atccaatgcc ggcgtgctcg aacatccggg caacgaggaa
     2701 gaagaggttc tcttcgccgc gatcaagaaa cggct
//
LOCUS       DATDHO010000278         1612 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_261441, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000278 DATDHO010000000
VERSION     DATDHO010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1612
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261441"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="VIY07_05360"
     CDS             <1..511
                     /locus_tag="VIY07_05360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HEY6381214.1"
                     /translation="MKSEQKAPPTTGQATPDSKSTTGQAPKSDADQKAQAPARSMDKD
                     SKPGAATGKSDANGASKTEQKAQSPSGTEQNRTTTGQGAAGSAKLTTEQRTKISSVIK
                     SQKVEPVRLSVSVSVGTRIPADVRLHPLPQQVIVIYPEWRGYDYILVGDQIVIVNPRT
                     HEIVAIVEA"
     gene            687..953
                     /locus_tag="VIY07_05365"
     CDS             687..953
                     /locus_tag="VIY07_05365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381215.1"
                     /translation="MKTLITLTTVAAIAAGISVAQAQGTMGAPSGSMQKAQTVGNSAF
                     CINMSGGGGMNCKYASMAACEKDAKPQNLSCSPNPNKSTTGSKQ"
     gene            1113..1526
                     /locus_tag="VIY07_05370"
     CDS             1113..1526
                     /locus_tag="VIY07_05370"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6381216.1"
                     /translation="METPLHDYRNLKLKLDGIVPPGHGFHRNLLFDALYSSLPRDPQV
                     KVQIYNAEIVPGGYTNWHCHNGAAFFVALQGIFEAHFQEGVLVKAKAGECYSEPIAKF
                     HRGHNPHPDLPYLCIGVCFTSPDREHVTNSVERPW"
BASE COUNT          379 a          478 c          449 g          306 t
ORIGIN      
        1 gatgaagagc gaacaaaaag cgcccccgac gactgggcag gcgacgccgg actcaaagtc
       61 aaccactggg caggcgccca agtccgatgc tgaccagaag gcgcaggctc ccgcgcggtc
      121 catggacaag gacagcaagc caggcgccgc gaccggcaag tctgacgcaa atggcgcgtc
      181 caagaccgag caaaaggccc aaagcccaag tggcacggag caaaatcgca ccaccaccgg
      241 ccagggtgcg gctggatcgg ccaagctgac gaccgagcaa cgcacaaaga tcagttcggt
      301 catcaaatcg cagaaggtcg aaccggttag gttgagcgta tcggtcagcg tcggaacccg
      361 tattccggcc gacgtgcgcc tgcatccgct cccgcagcaa gtgatcgtca tctatccgga
      421 atggcgtgga tatgattaca tcctggtggg tgaccagatc gtgatcgtta atccgcgcac
      481 gcacgagatt gtcgctatcg ttgaggcgta atttctcaat agcgatgacc gtgtgccggc
      541 ggccgggaga aatcccggcc gctgccattt tgtcaccgca tttaaaattt tttccaaaac
      601 ccttgctggt tccgggaacg cggtcgcgct ccttccgttg ttccgattgc cgcaaagccg
      661 gcgccaatcc aacaaggagc cagacgatga agacgttgat cactctcacc acagtcgccg
      721 caatcgctgc gggcatttct gtcgctcaag cgcagggcac gatgggtgcg ccatcgggaa
      781 gtatgcaaaa ggcccagacg gttggaaatt ctgcgttctg catcaacatg tcgggagggg
      841 gtggcatgaa ttgcaaatat gcaagcatgg ccgcctgcga aaaggacgca aaaccacaaa
      901 acctgagttg ttcgccgaat ccgaacaaga gcacgaccgg ctccaagcaa taattgcgcg
      961 ggaacggaac aaagcgaaaa gcccatgccg agcccggcat gggctttcaa tctccctgaa
     1021 agcccggcat tgcgccgggc ttttcgccgt gtgcgcgctt caccttcccg ttgcccacta
     1081 ctaggctgct gttcgctgca cgggaggttc ggatggaaac tccgcttcac gactaccgga
     1141 atctcaagct taaactcgac ggcatcgtgc cgcccggcca cggcttccac cggaatttgc
     1201 ttttcgatgc tctgtacagc tcgttgccaa gggacccgca ggtcaaggtg caaatttaca
     1261 atgccgagat cgtgccagga ggttacacaa actggcattg ccacaatggc gccgccttct
     1321 tcgtcgcatt gcagggcatc ttcgaagcac attttcagga aggcgtgctg gtaaaagcaa
     1381 aggccggcga gtgctattcc gagccgatcg ccaaatttca ccgcgggcac aaccctcatc
     1441 ccgatctgcc gtatctgtgt atcggagtct gcttcacctc tcccgaccgt gagcacgtga
     1501 caaattcggt tgaacggccc tggtaaactc gccttatcag ggtcgcagat ccgcaattac
     1561 cggaagatgg tctgaaagag cccaagcctt tttgtctatg taactgcgca tc
//
LOCUS       DATDHO010000279         1822 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_409758, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000279 DATDHO010000000
VERSION     DATDHO010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1822
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_409758"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..1195
                     /locus_tag="VIY07_05375"
                     /pseudo
     CDS             165..1195
                     /locus_tag="VIY07_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012778812.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            1617..>1822
                     /locus_tag="VIY07_05380"
     CDS             1617..>1822
                     /locus_tag="VIY07_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018238842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEY6381217.1"
                     /translation="MQRRGGSGQASKGQRAARPKAREASNASPKADLQEQLDRRTREL
                     EEALQQQTATSEVLRVISSSPSDL"
BASE COUNT          382 a          516 c          574 g          350 t
ORIGIN      
        1 atacgccaga gcggccaaag ccgcattcgg ggtcttcgct agagcacggt gaactagtgc
       61 agcgcacatg tccgctattg atgctgtgga cggctcctcc accggcacgc gagtgccatg
      121 aaagtgggtg ctgttaaggc ccccacgatt gagaggagcc aattatgcag gcagtcaaga
      181 cgatcggtct cgatattgcg aagtcggtgt ttcaggtgca tggcgttgat gccgatggcc
      241 aggtggtcat tcggcggaag ttgaaacggc gttacttgct ggccttcttc gaaaagctgc
      301 caacgtgcct tgttggtatt gaggcctgcg cgacatcgca tcattggtca cggcaactgc
      361 aggcgcttgg gcatctggtg cgcctgatgc cgccggctta cgtcaagcca tacgtcaagc
      421 gacagaagaa cgatgtcgcc gacgcggagg cgatctgcga ggccgtcacc agggccaata
      481 tgcggtttgt cgagaccaag acggtggagc agcagagttg cctgatgctg catcgtacgc
      541 gccatttgtt catccgcgag caaaccgcag tgattaatgt gatgcgcgcc catctcgcag
      601 agtttgggat cgttgccccg gtcgggcgca agggtgtcga ggagttgctc ggggttgttg
      661 ccgatcgtgc cgataaacgc attcctgaga tagctcgtgc ctgtctcgcg gctttgggaa
      721 ctcaactgca gcggctcaag gagcagcttc ttgagccgac cgtatgatta tggcctggca
      781 ccggtccgat gagaggagcc ggcggctcga tgaggctccc ggcatcggcc cgatgctggc
      841 cacggctgtg gttgctaccg ttgccgatcc aaaggctttc cgatcgggac gtaacttctc
      901 agcctgggtc gggctcgtgc cgaagcaaca ttcaagcggc ggcaaagacc gacttggtca
      961 tatcagcaaa caaggtgacc gctatctgcg cggcctgttc gtcgccggtg cgctcgccgt
     1021 tatccgctac gccaagatct atggcaccag acatcggccc tggcttacgg cattgttggc
     1081 gcggcggcca acaaaggtgg ctgctatcgc gctcgccaac aagatcgcgc ggatgacttg
     1141 ggcaatgatg gtcaagggtg aacgttacaa ggaacccgtc gcgcttgcgg cgtaaacgag
     1201 atcgcgtcgg acagccggcg tgatgtgaag gttgggaggg cgagcagcac gtaatgcaga
     1261 gccggtcgat ctggcgatca ggacaaccca cttaccccga cgcattgtcg aatgcgggct
     1321 ttcgtttggg acctgatccg cggagggcat tatggccagc ggccacgtgt gccgcgcaaa
     1381 aaggccgaac acacgggcgc accgaccaat gctgctgcat atgtgaagaa agctcttgcc
     1441 aactcggagc cgtccacaca cgggggtaaa gcggacatcg cgttgatgcc tcaaaatatc
     1501 cgcttataac ccgacgagaa catcgccagt gccctttgat tgaccctcta ctgccatggc
     1561 gcgaaaccta ggatttgcct aggattgagc atcgtcgtga accgcccggg ggcgacatgc
     1621 agcgacgcgg tggaagcgga caggcgtcca agggccagcg cgcagctagg ccaaaggctc
     1681 gcgaagcatc gaacgcgtct cccaaggccg acctgcaaga acaactcgac cgacgtaccc
     1741 gcgagcttga agaggcgctc cagcagcaga cggcgacctc tgaggtattg cgcgtcattt
     1801 caagctcccc gagcgatctg aa
//
LOCUS       DATDHO010000280         2135 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_13548, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000280 DATDHO010000000
VERSION     DATDHO010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_13548"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..1263
                     /locus_tag="VIY07_05385"
     CDS             202..1263
                     /locus_tag="VIY07_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018324356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6381218.1"
                     /translation="MQNKAVVVGALGVIGRYIAEKLIEEPDWQVVGLSRRKASDGARY
                     RHIAVDLLDAEDTRRKLGQLADVTHVFYAAFQASPGSASNFASNTGPNRDMLVNSVTA
                     IACASPHLKRVVLVTGTKYYGTHLGPTKTPMRETDPRHMPPNYYFDQIDWLTAYQRGK
                     EWDWVELRPQTLCGFAPGSPMSILPAIAVYAAISKELGLPLRFPGKPGAYGTLYQVTE
                     STHFASAALWAATNERCGNEAFNITNGDYFRWRNLWHKIAAVFEMSVGDPQTISLTQH
                     MADKGPLWEEMTTKYKLRRFSYSDLVAWPFADYVFGTDWDVMSDLTKARLFGFHDVVD
                     SEAMFVRLLRRFRDERIVP"
     gene            complement(1329..2030)
                     /locus_tag="VIY07_05390"
     CDS             complement(1329..2030)
                     /locus_tag="VIY07_05390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003498150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381219.1"
                     /translation="MLSIENIRSAYGRIEVLHGVTIHVDAGEIVTLIGANGAGKTTLM
                     HAISGVQPITDGVIRYEGETIEQRPAHARVALGISQVPEGRQIFEPLSVKDNLMLGAW
                     LHPKDDLDKDLARVCALFPMLETMWDVPAGALSGGQQQMLAIGRALMAKPRLLLLDEP
                     SMGLAPNLVDQVLSTIRSLKDENLTILLVEQNARAALSIADRAYVMETGKITLSGTAA
                     EIRSDPRVRAAYLGI"
BASE COUNT          439 a          616 c          616 g          464 t
ORIGIN      
        1 gccgggcaca tggtgcatta ttttacggcg gacgggattg tgaagtcggc ggaggtggtg
       61 agggttgaag cggggccatg atcgcggtgt cggcctctcg cgtttgaatt gttgcccgcc
      121 ttttatcaga tacagtagat acggcattcc aaaaacggga aagcaaaacg tgggccgtaa
      181 agacggccgg gtaagacaat tatgcaaaac aaggcggtcg ttgtcggtgc gcttggtgtc
      241 attgggcgct acatcgccga gaagctcatc gaggagcctg attggcaagt ggtggggctg
      301 tcgcgacgca aggcgtcgga cggggcacgc taccggcaca tcgcggttga tctccttgat
      361 gcagaagaca cgagacgcaa gctcggccag ttggctgacg tcacccacgt cttctacgcc
      421 gccttccagg cttctcctgg aagcgcatcg aacttcgcgt ccaacacggg cccaaatcgc
      481 gacatgctgg tgaactcggt caccgcgata gcttgcgctt caccgcatct gaaacgggtc
      541 gtgctcgtca ccggcacaaa atactacggc acacatcttg gaccgacgaa aactccaatg
      601 cgggagaccg atccccgcca catgccgccc aattattact tcgatcagat tgattggctg
      661 accgcatacc agcgaggaaa agaatgggac tgggtggaac tgcgcccgca aaccctttgc
      721 ggctttgcac ccgggtcgcc aatgagcatt cttccggcaa tcgcggtcta tgctgcaatt
      781 tcgaaagaac tcggtttgcc gctgcgcttt ccgggtaaac ccggtgctta cggcacgctc
      841 tatcaggtaa ctgaatcgac ccattttgcg agtgcagcgt tatgggctgc cacgaacgag
      901 cgatgcggaa atgaagcctt caacattacc aatggcgact attttcgatg gcggaatctt
      961 tggcacaaga tcgcagcggt gttcgaaatg tccgtcgggg atccgcaaac aatttccctc
     1021 acgcagcata tggccgataa gggtccgctc tgggaggaaa tgaccaccaa gtacaagctc
     1081 cggcgctttt cctacagcga tctcgttgcg tggccctttg ccgattatgt ctttggcact
     1141 gactgggacg tgatgtctga tctgaccaag gctcgccttt ttggtttcca tgatgtggtc
     1201 gatagcgagg cgatgtttgt gcgcctgctg cgccgctttc gagacgagcg gatcgtgcct
     1261 tagacgaatg cctgttttct ggcggacatg acccgaacat tgccgaatgt ccgctttccg
     1321 aacgtttttt aaatacccag ataagccgcg cgaacgcgcg gatccgaacg gatttcagcg
     1381 gcggtcccgc ttaacgtgat ttttccggtt tccatgacgt aggcgcggtc cgcgatcgaa
     1441 agcgccgcac gcgcattctg ttccaccagc aggatggtca ggttctcatc tttcagcgaa
     1501 cgaattgtgc tcagcacctg atcaaccagg ttgggagcca ggcccattga cggttcgtca
     1561 agcagcagca gtcgaggctt tgccatcagg gctcggccga ttgcgagcat ttgctgctgc
     1621 ccgccggaca aggcacccgc cggaacgtcc cacatcgttt ccagcatcgg gaacagcgcg
     1681 caaacgcgcg caagatcttt gtccagatcg tccttgggat gcagccaggc gccaagcatc
     1741 agattgtcct tgaccgacaa aggctcgaag atttgccggc cttccgggac ctgcgagatg
     1801 ccgagcgcga cacgcgcatg ggcaggccgt tgctcgattg tctcgccttc gtatcgtatg
     1861 acgccatctg tgatcggctg cacgcccgaa atcgcgtgca tgagcgttgt cttgccggcg
     1921 ccattggctc cgatcagcgt gacaatctcg cccgcatcga cgtggatcgt cacgccgtgc
     1981 aggacttcaa tgcggccata ggcgctcctg atgttttcaa tcgaaagcac tcagagcctc
     2041 ctgcgagccg tgcacgccca gataggcctg gatcactgcc gcatcggacc gcacttgttc
     2101 aggcgtccct tcggcaagtg tccggccgtt cgcca
//
LOCUS       DATDHO010000281         1636 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_310611, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000281 DATDHO010000000
VERSION     DATDHO010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1636)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1636)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1636
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310611"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VIY07_05395"
     CDS             complement(<1..381)
                     /locus_tag="VIY07_05395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381220.1"
                     /translation="MTKASRSFFKLGIICCAASLLLFFPGLALTRDLDGKYSNSPLKQ
                     WFESLASRRGPCCSFADGQSVEDVDWDTKDGNIECDLTANGSRYRPTRLVTVSNKFGV
                     AVVWPYNDYEGRTQIRGFIPGAAGN"
BASE COUNT          329 a          498 c          462 g          347 t
ORIGIN      
        1 gttacccgcc gctccgggga taaagcccct gatctgcgtc cggccctcat agtcgttgta
       61 gggccatact actgccaccc cgaacttgtt tgatacggtt accagccgcg tcgggcggta
      121 cctcgatcca ttggccgtca agtcgcactc gatatttcca tctttcgtat cccaatctac
      181 atcctcaacg ctctggccat cagcaaatga gcagcaaggc cctcttcggc ttgcgaggct
      241 ttcgaaccac tgcttgagcg gcgagtttga atattttccg tcgaggtcgc gggtaagagc
      301 cagtccggga aaaaacagca ataacgatgc cgcgcagcaa ataatgccga gcttgaaaaa
      361 ggaacgcgag gctttcgtca tacgcatcgt ccgatttttt cgatgcatag gccccaagcc
      421 agattaattg ctctagggcg cgcgagcgag ttggaccgta atccaactgg ctccaccaat
      481 gtccgccttc gctcattggc gtttgtcggc gcaatgactc cttgcgtcga ggcggtcctg
      541 ccatgcctta caaaaataga ctaccgccga gccgcgcagc gccagtaacg gtgaccgttt
      601 tgcgtgtagg caacccgtcg catgccgtaa cgggcgcaaa catccgaacg tcgcgctggc
      661 gtttcttgca gcgccacctt gaccggttgt cggtcggcct gtggtgccgc ggcgtaatcg
      721 agcgatacgg cttgcatcag tggtgatgga tcctctgaca acggttgcat cggcaggccg
      781 ccgatgaggc cttctagcgg gtccacgcga cggcactggt attggtaccg gcagcaacgg
      841 cgcgtcggtg gccgcatgcc agcggcgctc gaacccgtcg gtgatggctg cgcccacagt
      901 ctcagcagtc tggtgttttt gcgatatgac cttgcggtca acatcgaccg gcaccgatcg
      961 cgacggccgc agcgtgagcg gcggcgacag cgccaacgat aacgagatca tggcccccgc
     1021 ggccatcgtc actccgcccg acgccagcag ctgcatcatc tgcataaggc gaaatcgttt
     1081 gccccattcg tggcatcgga atgacgcatc tgcccaataa gcggcacgat ggtaccgtct
     1141 ccccttttga ttgtgcagga acatgcaaaa cggcccggcg aaattgggcg attaccattt
     1201 ccgactattc acgaacgacg atgttcgtac gccccgtccg cgcctcagcc gtcgcctgcg
     1261 cgacgatggg gcgcgctccg gtgactggcg gcaaatcgaa tcggtggcgc gcgcatcaga
     1321 aaagcgtggt gacggccacg cgatgactcc catcttcagc gatgcaataa taccaaccga
     1381 ataaaagagt cctgcagtct ggggggccgc aaatgcgcgc cggttgccga tcgggtggac
     1441 ggttgtggta agtgagttga tatcgagcct tgctcgcagc acgcagaatt ttcgtcccca
     1501 ccccattgtg gggctatcta ttctctttcg ccgctactca attcgaacgc agttactctt
     1561 catattgatc gctctctccg cgatcgcatg ggtcgttggc ggagccgtta ccattctgca
     1621 ggccaggaaa tcaacg
//
LOCUS       DATDHO010000282         2267 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_162136, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000282 DATDHO010000000
VERSION     DATDHO010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2267
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162136"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..843)
                     /gene="rfaD"
                     /locus_tag="VIY07_05400"
     CDS             complement(<1..843)
                     /gene="rfaD"
                     /locus_tag="VIY07_05400"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEY6381221.1"
                     /translation="MFLVTGGAGFIGSNIVASLNEAGSTDVVVSDLLGRDDAKWRNLA
                     KHQVADLVPPNELAAWLESRKLDAVIHMGAISDTTATDGDLVMENNFRLSLRLLDWCT
                     TTRTPFIYASSAATYGDGSQGFDDDWSIDALRKLKPMNLYGWSKHLFDLAVVDRYMKK
                     EKMPPHWVGLKFFNVYGPNEYHKAHMASVLAKVFDTARAGSPVRLFKSHREGIADGDQ
                     RRDFIYVDDAVFVLRWLLEATGINGIFNVGTGKAESFRDMIAAMFKALRLPLNIEYIE
                     MPETI"
     gene            1038..2111
                     /gene="waaF"
                     /locus_tag="VIY07_05405"
     CDS             1038..2111
                     /gene="waaF"
                     /locus_tag="VIY07_05405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEY6381222.1"
                     /translation="MSQNFKQGAVRPVLIAPYVWIGDFVRCHSVVQLLRAQNPDRPVD
                     VVSSTLCAPLADYMPGIRRAIVIDLPRGTLGLALQRELARRLREERYEQAIIMSRKWK
                     AALAPWLADIPVRTGFAGEFRFGLLNDVRFGESKLPRMIDQMGALSLPKNALLPNEWP
                     LPELKVPGDEVNAWRGRQGIGNEARPIVTLSPGAVGAGKAWPAAHYGQLARMLVQDGA
                     SVWVLGGPSETSIAQEIAAMAGSRVRDLTSTDLRNAVLALAAADISVTNDSGLMHVSA
                     AIGTPTIAIFGPTSPWHWKPLNPVSAILEPPGDERARERARTDGNIAVRHRRTDDVTV
                     ETVLATVRKVIAQTKINAGRHDR"
BASE COUNT          458 a          691 c          666 g          452 t
ORIGIN      
        1 gattgtctcc ggcatctcga tgtattcgat attcagggga agccgaagcg ctttgaacat
       61 cgcggcgatc atgtcacgga agctttccgc cttgccggta cccacattga agatgccgtt
      121 tattcctgtt gcctcgagca gccagcgcag cacgaaaacg gcgtcatcga cataaatgaa
      181 atcccgtcgc tgatccccgt cggcaatgcc ctcgcggtgc gatttgaaca ggcgcacggg
      241 acttcctgcc ctggccgtat cgaacacttt tgccaggacg cttgccatgt gagccttatg
      301 gtattcgttc ggaccataca cgttgaagaa cttcagtccg acccaatgcg gcggcatctt
      361 ttctttcttc atataccggt cgaccacggc gaggtcgaac agatgcttgc tccagccata
      421 gagattcatc ggcttcagct tacgcaaagc atcgatcgac caatcatcgt cgaacccctg
      481 gctgccgtcg ccgtacgtcg ctgccgagga cgcgtaaata aaaggcgttc gcgtggtcgt
      541 gcaccagtcg agcagcctca gcgataggcg gaaattgttt tccatcacga gatcgccatc
      601 ggttgcagtc gtgtccgata tcgcgcccat gtggatgaca gcatcaagct ttcggctttc
      661 aagccaggcc gccagttcgt tcggtggcac aagatcggca acctggtgct tcgccagatt
      721 gcgccatttg gcgtcgtcgc gacccagcag atcgctcacc acgacatcgg tcgatcccgc
      781 ctcgttgagg ctggcgacga tgttcgaccc tatgaacccg gccccgccgg ttaccaaaaa
      841 catccctgcc ctcgccaccc gatggtcgca ggacagaacc tttgccccag cgcgtcgccc
      901 ggcgcaaatc ctacgatgtt cagggctgcc gatgggtcgg aatagggtaa aaatcgcgac
      961 tggacaggtg gctgtggctc agggtaacgg ctgccccggc ggcctcagag ggataaaggg
     1021 gtgtgcggca ccagtcgatg agccagaact tcaagcaagg agctgtccgg ccggtgctca
     1081 tcgctcccta cgtctggatc ggtgatttcg tccgctgtca ttcggtggtc caacttttgc
     1141 gcgcgcagaa ccccgaccgc ccggtggacg ttgtcagcag cacgctttgc gcgcccctag
     1201 ccgactacat gccgggcata cgccgcgcca ttgtcatcga tttgccgcgt ggaacattgg
     1261 gcctcgctct ccagcgagag ctcgcacgaa ggctgcgaga ggaacgctat gagcaggcga
     1321 tcatcatgtc gcggaaatgg aaagcggcac tcgctccctg gcttgccgat attccggttc
     1381 gtacaggctt tgccggcgag tttcggttcg gcctgcttaa tgacgtgcgt ttcggcgaaa
     1441 gcaaattgcc acgcatgatc gaccagatgg gtgccctatc gctgccgaag aatgcgctac
     1501 tcccaaatga gtggcccttg cccgaattga aggtgcccgg cgacgaagtg aacgcgtggc
     1561 gcggacgtca gggaattggc aatgaagctc ggcccatcgt caccctgtca ccgggcgcgg
     1621 tcggcgccgg caaggcgtgg cccgccgcgc attatggcca gctcgccagg atgctcgtcc
     1681 aggacggggc ttcggtctgg gttttgggcg gaccgagcga aacttcgatc gcacaagaaa
     1741 tagcggcgat ggcgggaagc cgggtgcgag atctgaccag caccgattta cgcaatgcgg
     1801 tcctggctct tgccgcggca gatatttccg tcaccaatga ctccggcctg atgcatgtgt
     1861 cggcggcaat cggtacgcca acgatcgcca tctttgggcc aaccagtcct tggcattgga
     1921 aaccgctcaa tccagtctcc gccatcctgg agccgcccgg cgatgagcgc gcgcgtgagc
     1981 gtgcacgcac cgacggcaat attgccgtgc gccaccgacg caccgatgat gtcaccgttg
     2041 aaacagtgct tgcgaccgtg cggaaagtga ttgcgcaaac aaaaatcaat gctggccggc
     2101 acgaccgcta acgagtaggc gaagcaacct gacgtgaagt tcttttcgtg gtatcaagca
     2161 gcatggccaa accgaaaccc gtcgatgtga ccgctgatcg aacgcaggcg acgattgcgt
     2221 cggcgctccg caccctcgaa gccgagggta gtggcgtcga cgcccta
//
LOCUS       DATDHO010000283         1650 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_261698, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000283 DATDHO010000000
VERSION     DATDHO010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1650
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261698"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1560
                     /gene="recG"
                     /locus_tag="VIY07_05410"
     CDS             <1..1560
                     /gene="recG"
                     /locus_tag="VIY07_05410"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEY6381223.1"
                     /translation="LSDLAEWQDAAWVARERFPTFAAALRNLHRPDQPHDIAPENPAW
                     TRLAYDELLAGQLALALMRSHMRRQAGRGSASEGRLRARILKALPYALTHSQQKAVDD
                     IITDLARPQRMLRLLQGDVGSGKTVVALTAAAAVIEAGRQAAFMAPTEILARQHLATV
                     APLAEAAGIRVAILTGRERGPARKEVLDRLALGDIDLLLGTHALFQEDVVFRDLALAI
                     VDEQHRFGVHQRLALTQKGEAVDVLVLTATPIPRTLVLTFFGDMDISELREKPPGRQP
                     IDTRAIPLSRLEEVEDAVGRVLMDGKRAYWVCPLVDESEKSDLAAAQARFEELRKKFG
                     EQVDLVHGRMKGAEKDAAMARFAAGETQLLIATTVIEVGVDVPEATIMVVEHAERFGL
                     AQLHQLRGRIGRGHGASTCLLLYRAPLGETAKARLAILRQTEDGFRIAEEDLRLRGEG
                     DLLGTRQSGLPGFQIARPEVHGKYLGAARDDAALILSRDATLTTPRGEALRQLLYLFG
                     KDEAIRLIRAG"
BASE COUNT          301 a          534 c          515 g          300 t
ORIGIN      
        1 ctatcggatc tggcggaatg gcaggacgca gcctgggtcg cgcgcgagcg atttcccaca
       61 tttgctgccg ccttgcgtaa tcttcaccgg ccggatcaac cgcatgacat tgcgccggaa
      121 aatcccgcgt ggacgcggct cgcctatgat gagctgcttg caggtcagct cgcgctcgcg
      181 ctcatgcgtt cgcacatgcg acgacaggca ggccgcggct cggccagcga aggccgcttg
      241 cgtgctcgaa tcctgaaagc gctgccttat gcgctcacgc attcgcagca gaaggcggtc
      301 gacgacatca tcacggatct cgcccgtcct cagcgaatgc tgcggctgct gcaaggcgat
      361 gtcgggtcgg gcaaaaccgt agttgctctc actgccgcag cggccgtcat cgaagcgggc
      421 cggcaggccg cattcatggc gcctacggaa attcttgccc gccagcatct cgccaccgtc
      481 gcgccgctgg ccgaagccgc cggcattcgc gtcgcgatac tcactggccg tgaacgtggg
      541 ccggcgcgaa aggaggtcct cgatcgtctc gcgctcggcg acatcgatct tctgctcggg
      601 acccatgcgc ttttccagga ggacgttgtt ttccgcgatc tcgcattggc catcgtcgac
      661 gaacaacacc gcttcggcgt gcatcaacgc cttgcgctga cccagaaggg cgaggcggtg
      721 gacgtgcttg tcctcaccgc tacgccgatc ccccgcacgc tggtgcttac gtttttcggc
      781 gacatggaca tttccgaact gcgcgaaaag cctccgggac ggcaaccgat cgatacccgc
      841 gccattccgc tgtcgcgtct tgaggaggtc gaggatgctg tcgggcgcgt cctcatggac
      901 ggcaagcgcg cctattgggt ctgccctctg gtcgatgaat cagaaaaatc cgatctcgcc
      961 gccgcgcagg cccgcttcga ggaactgcgc aagaaattcg gcgaacaggt tgacctcgtc
     1021 cacggccgca tgaaaggcgc cgaaaaggat gcggccatgg cccgatttgc cgccggcgaa
     1081 acgcaactgc tgatcgccac gaccgtcatc gaggtgggcg tcgacgtgcc ggaagcgaca
     1141 atcatggtcg tcgagcacgc cgaacgcttt ggcctcgcac agttgcatca gctccgcggg
     1201 cgtatcggcc gaggacatgg cgcttcgacc tgcctgttgc tctacagggc tccgctggga
     1261 gagaccgcca aggcgcgtct ggccatcctg cgccaaacgg aagacggctt ccgcatagcc
     1321 gaagaagacc ttcgactgcg cggcgaaggc gatctgctcg ggacgcgcca aagcggcctg
     1381 cccggctttc agatcgcgcg tcccgaagtg cacggcaaat atctcggcgc ggcccgtgac
     1441 gacgcagcac tcattttgtc acgcgatgca acgctgacga cgcctcgcgg cgaggcgctg
     1501 cgtcaattgc tttacctttt cggcaaggac gaggcgatca ggctgatccg cgcggggtga
     1561 aaattatctt gcggccagcg ggttggggcc gaagcggttg cgacctgctg ttccctttgt
     1621 gcaaaaccag acgagcaaca agatgtgacc
//
LOCUS       DATDHO010000284         2120 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_112841, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000284 DATDHO010000000
VERSION     DATDHO010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_112841"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..766)
                     /gene="pgeF"
                     /locus_tag="VIY07_05415"
     CDS             complement(<1..766)
                     /gene="pgeF"
                     /locus_tag="VIY07_05415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEY6381224.1"
                     /translation="MLQAAILAPLANIRHAFFTRYGGVSPGVYASLNGGVGSNDRPEN
                     VAENRARMAAILGVSPDRLLTAYQIQSPDVVVAEEPWTRDTRPRADAIVTRVPRLAIG
                     VSTADCGPLLLADGDARVIGAAHAGWRGALTGVIEATIAAMERIGADRKAMTAALGPT
                     IRQQNYEVGPEFVERFLSADAANARFFAASQKREHALFDLAGYIGACVRRAGIAQFED
                     LGLCTYAEPDRFFSYRRTTHNGEPDYGRHISAIALAD"
     gene            complement(835..1932)
                     /locus_tag="VIY07_05420"
     CDS             complement(835..1932)
                     /locus_tag="VIY07_05420"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEY6381225.1"
                     /translation="MVEQSPLEPEIRRRILAGGPMPVAEYMALCLADPTHGYYTTHDP
                     FGARGDFVTAPEVSQMFGELIGLWVAAVWKQMGAPENVRLIELGPGRGTMMKDALRAV
                     RIVPEFLGAVVVHLVELSPILQAQQEKALADAGVPVFWHSALAGVPKGPAIILANEFF
                     DALPVSQAVKTERGWHERRIQIDASGQLAFTIAPEPIPFFHTLLPPALRAPRAGAIFE
                     WRADTAPMELGRRAADDRGAALVIDYGHTETGLGETLQAVGQHAYADPLASPGSLDLT
                     AHVDFRALTRAVEAMGAIGFGPIEQSQFLRRLGIEHRAAALRAKGAHRREIDSALERL
                     IGHNRSAMGELFKVAAFAHPALGVPPGFETK"
     gene            complement(1911..>2120)
                     /locus_tag="VIY07_05425"
     CDS             complement(1911..>2120)
                     /locus_tag="VIY07_05425"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase family
                     protein"
                     /protein_id="HEY6381226.1"
                     /translation="IGCFAVGYAVARSFCELFREPDAQLGFLWGGATMGQLLSAPLFL
                     AGVGFIVYALRHRPRRSRSWSSSRR"
BASE COUNT          436 a          667 c          641 g          376 t
ORIGIN      
        1 aatcggcgag cgcaatggca ctgatgtgcc ggccgtaatc cggttcgcca ttgtgggttg
       61 tgcgccgata gctgaagaac cggtccggct ctgcgtaagt gcacaggccg agatcttcga
      121 attgggcgat gccggcacgc cgaacgcatg cgccgatgta gccggcgaga tcaaacagcg
      181 cgtgctcccg tttttgcgac gccgcgaaga aacgcgcatt ggctgcatct gccgaaagaa
      241 aacgttcaac gaattccgga ccgacctcat agttttgttg tcggatcgtc ggaccgagcg
      301 cggcggtcat tgctttgcga tcggccccga tgcgctccat cgcagcgatt gtggcttcaa
      361 tcacgcctgt aagtgctccg cgccaaccgg catgggcggc gccgattacg cgcgcatcgc
      421 catccgccag cagcagcggt ccacaatcgg ccgtcgacac cccgattgcc aaccgcggca
      481 cccgcgtgac gattgcgtct gcgcgcgggc gagtatcgcg cgtccatggc tcttcggcca
      541 cgaccacgtc gggcgactgg atctgataag cggtcagcag gcgatcggga ctcacgccca
      601 atattgccgc catccgtgca cggttctcgg caacattttc gggccgatcg ttggatccaa
      661 caccaccgtt gagcgaggca tacacgccgg gcgaaacgcc gccgtagcgc gtaaaaaagg
      721 cgtgacgaat attcgcgagc ggagcgagta tggcggcttg cagcatcgtt cagtctggat
      781 gacccatcac ttcgattggt ccgatagata agatgcccat cgatgtgcga ccagttattt
      841 cgtttcgaag ccggggggca cgccaagcgc gggatgcgcg aaggcagcaa ctttgaacag
      901 ttcacccatg gcgctccgat tatgaccgat cagccgttca agcgcagaat cgatttcacg
      961 gcggtgtgcg cccttggctc tcaaggccgc agcgcggtgc tcgatgccga gacgtcgcag
     1021 gaattgagat tgttcgatcg gcccgaagcc gattgcgccc attgcctcga ccgctcgggt
     1081 cagtgcccga aagtctacgt gagccgtcag gtccaggctg ccgggggacg caagaggatc
     1141 tgcataggca tgctgaccga cagcctgcag ggtttcccca aggcctgttt cggtatgacc
     1201 atagtcgatc acgagcgcgg cgcctcgatc gtctgcggcg cgccgcccaa gctccatggg
     1261 cgcagtgtcg gcgcgccatt caaaaatcgc gccggcccgc ggcgcacgca aggcaggcgg
     1321 taggagcgtg tgaaaaaatg gaattggctc aggggcaatt gtgaaagcca gttgcccaga
     1381 agcgtcaatc tgaatgcgac gctcgtgcca tccacgctct gtttttacgg cctgactgac
     1441 aggcaaagca tcgaaaaact cattggccaa aatgatcgca ggtcctttcg gcactcctgc
     1501 aagggcggaa tgccaaaaga cgggaacacc tgcgtctgcc agcgcctttt cctgttgcgc
     1561 ttgcagaatg gggctgagct ccaccaggtg caccacgacc gccccaagga attccggaac
     1621 aatccgaacc gcgcgcagcg cgtctttcat catcgtgcca cgcccgggac cgagctcgat
     1681 caggcgtacg ttttcaggtg cgcccatctg tttccatacg gcggcaaccc acaagccgat
     1741 cagttcgccg aacatctgac tcacttccgg ggcggtaacg aaatcgcccc gcgcgccaaa
     1801 cggatcatga gtggtgtagt agccgtgcgt gggatccgcg aggcacagcg ccatatactc
     1861 tgcgacgggc attggcccgc ccgccagaat gcgccgccgg atttccggct ctaacggcga
     1921 ctgctcgacc acgatcgact ccgccgcggg cgatgtctca gcgcgtagac gatgaaaccg
     1981 acaccagcca agaagagcgg cgccgacagc aactgcccca tcgtcgcgcc gccccacagg
     2041 aagcccagtt gcgcgtcggg ctcgcggaac agttcgcaaa aactgcgggc gactgcgtag
     2101 cccacagcga agcacccgat
//
LOCUS       DATDHO010000285         3133 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_310695, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000285 DATDHO010000000
VERSION     DATDHO010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3133
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310695"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..827
                     /locus_tag="VIY07_05430"
     CDS             <1..827
                     /locus_tag="VIY07_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381227.1"
                     /translation="GVSVADMGSGGAALSDPRPMRRPAALPVLLPAVSPADPVQSAAR
                     PPVSSFEALDACLEPDVCIDQYLWSLYERAKKVDTVKVTERTKVTVKKKGKTKTVVKT
                     LTKYVTEDFGWKDPIAAEKAGMSLQDYVIGGMDRGFKRKLYHALRAMDDAGLAPGITS
                     AFRDEYRQGIATGIKAATGSSYHGGSRRGGYGHGLAADIVSLKGETRAERYIWSDMLW
                     KWIDAREKELGIARPYLDRDPPHVAPIDGKEYADKRGAAKARLAGLKKPSSSSNRK"
     gene            847..2025
                     /locus_tag="VIY07_05435"
     CDS             847..2025
                     /locus_tag="VIY07_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6381228.1"
                     /translation="MSAVVLRRIIRVVRSLLLAALAVCVLSAGTPAHARSPFWPQFKF
                     WWGDHHFRHKHQHKRTKSDLAKKPQSQDASKAPLQIIISIADQRISVYENGSLIARSS
                     VSTGVERHPTPLGVFSVISKHKWHRSNIYSDAPMPYMQRITWSGIALHAGDLPGYPAS
                     HGCIRLTKDFAIRLWHLTKRGTRVIIAREDIQPVEITNPQLFVPRPRVASASPEAGTA
                     TLVSNDNVTGATTRAPLISNNDEGTKTSDAAPAGARAQKMVPISVFVSRQLSKLFVRK
                     GFTPLFDVPIKIRDPAEPMGTHVFSAMEFQNEGTAMRWNVVSIPEKSSLSQGNPPKLH
                     KGSPIPGKASAALERVEIAQDVVDRISELLTPGSSLIISDHGISHETGRDTDFIVLTH
                     "
     gene            complement(2036..2953)
                     /locus_tag="VIY07_05440"
     CDS             complement(2036..2953)
                     /locus_tag="VIY07_05440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY6381229.1"
                     /translation="MSLSRREFSGLCVAFGSFTAATALDAASSKASATPKRTVKFRDG
                     TVVSALGQGSAGLGKGKRPQAEEQEALRTGLSLGMTVIDTAEIYGSEEFIGRAIAGQR
                     DRVFLVSKVWQNHVAGDGVARACEASLKRLGTDHLDLYLLHWPKGVTNISAVVTAFEK
                     LRTAGKIRAWGVSNFTVSDMEKLFRVPQGDRCATNQLPYSIGDRDIERDVLPWCERHG
                     MPIMAYSPLGGPGAKLLRDPTLGRIATEHGCSAAAVALAWTIRNGNVIAIPESGSVAH
                     VKENAVALSLTLTAQDIQTLEAAHPLPRR"
BASE COUNT          673 a          914 c          921 g          625 t
ORIGIN      
        1 acggtgtctc cgtcgccgat atggggagcg gcggcgccgc cttgtccgac cctcgtccga
       61 tgcggcggcc cgcggcgcta cccgtgctgc tcccggcggt gagtccggct gatccggtgc
      121 agagcgccgc caggccgccc gtgagctcgt tcgaagctct cgatgcgtgc ctcgagccgg
      181 acgtctgcat cgaccaatac ctctggtcgc tgtacgagcg ggcgaagaag gtcgacaccg
      241 tcaaggtgac ggagcggacc aaggtgacgg tcaagaagaa gggcaagacg aagaccgtcg
      301 tcaaaaccct gactaagtac gtcaccgagg acttcgggtg gaaggatccg atcgccgcgg
      361 agaaagccgg catgtcgttg caggactacg tgatcggagg catggatcgg ggcttcaaac
      421 gcaagctgta tcatgcgctt cgcgcgatgg acgacgccgg gcttgcgcct ggcataacca
      481 gcgcattccg cgatgaatac cggcaaggga tcgcaaccgg catcaaggct gcgacgggca
      541 gctcgtacca tggcgggagc cgccgcggcg gctatggtca tgggctcgcg gccgatattg
      601 tgagcctgaa gggcgagaca cgcgcggaga gatatatctg gagtgacatg ttgtggaagt
      661 ggatcgatgc gcgcgaaaag gagcttggga tcgcccgtcc gtatctcgac agggatccgc
      721 cgcatgttgc gccgattgat ggcaaagaat acgccgataa acgcggcgcc gcgaaggcgc
      781 ggctcgctgg attgaaaaag ccatcgtcgt catcaaaccg aaagtgaacc aagttgtgag
      841 cgttggatgt ccgcagtagt tctccgacgc atcatcagag ttgtccgctc cctgttactg
      901 gcagcgcttg ccgtttgcgt gctttcggca gggacgcctg ctcatgcccg atccccgttt
      961 tggccccagt tcaaattttg gtggggtgat caccatttcc ggcacaagca tcaacacaag
     1021 cgcacaaaat ctgatttagc gaagaagcct caatctcaag acgcttccaa ggctcctctt
     1081 cagatcatca tctcgatcgc ggatcagcgg atctcggttt acgaaaatgg gtcgctgatc
     1141 gcacgttctt cagtgtcgac gggtgtcgag cgtcatccaa cgcctctcgg cgtcttcagc
     1201 gtaatcagta agcacaaatg gcatcgctca aacatttata gcgatgcgcc catgccttac
     1261 atgcaacgca taacctggtc gggcatagcg ctgcatgcgg gcgacttgcc cggctacccg
     1321 gcgtcacatg gctgcatccg cctgacaaag gactttgcca ttcgactttg gcatcttact
     1381 aagcggggca cgcgcgtaat tatcgcgcgc gaggatattc aacccgtcga gattactaac
     1441 ccgcaacttt ttgtgccgcg gccaagagtt gcgtccgctt cgccggaagc cggcactgcg
     1501 accctcgtga gtaatgacaa tgtcacaggt gcgacaacgc gtgccccgct aatatcgaac
     1561 aatgacgagg gcaccaaaac ctcagacgcg gctcccgcgg gagccagggc tcaaaagatg
     1621 gtgccaatct ccgtttttgt gagccgccag ttgagcaaac tgttcgtgcg aaagggattc
     1681 acgcccctct ttgacgtccc gatcaagatc cgagatccag cggaaccgat gggaacgcac
     1741 gtttttagtg caatggaatt tcagaacgaa ggcacagcga tgcgctggaa cgtcgtgtcg
     1801 attcccgaga agtcgtctct cagtcaaggg aatccaccta agttgcacaa aggatcgccc
     1861 atcccgggca aagcaagcgc cgccctggag cgcgtcgaaa tagcgcaaga cgtggtcgat
     1921 cgaatttctg aattactgac gcccggctcg tcgctaatca tatccgacca cggcatcagc
     1981 catgagaccg gcagagacac ggatttcatc gtattaacgc actgagagca cgcgcctagc
     2041 gcctgggcag cggatgcgcc gcttccagcg tctgaatatc ctgcgctgtt agtgtcagtg
     2101 agagcgcaac ggcgttctcc ttcacatgcg caaccgaacc ggattcggga attgcaatga
     2161 cattgccgtt acggatggtc caggccagag cgaccgcggc cgccgagcag ccgtgctccg
     2221 tggcgatacg tccaagcgtc ggatcacgca gcaacttggc gccggggccg ccgaggggcg
     2281 agtaagccat tatcggcatg ccgtgccgct cgcaccaagg caacacatca cgttcaatgt
     2341 ctcggtcgcc gatactgtaa ggcaactgat tggtcgcgca gcgatcgcct tgcggaacac
     2401 ggaaaagttt ttccatgtcg ctgactgtga aattggatac accccacgcg cgaatctttc
     2461 ctgctgtgcg taatttttca aacgcggtca caacggcgga aatattggtg accccttttg
     2521 gccaatgcag cagatagaga tcgagatggt cggtgccgag gcgtttgagg cttgcctcgc
     2581 aagcgcgcgc cacgccgtct cccgccacgt ggttttgcca caccttggac accaggaaaa
     2641 cgcgatcgcg ctgaccggcg atcgcgcggc caatgaattc ctcagaaccg taaatttccg
     2701 cagtgtcgat cactgtcatt ccgagagaga ggccagtgcg taacgcttct tgttcctcgg
     2761 cttgagggcg ttttcccttt ccgaggcccg cagaaccctg gcccagggcc gacacgacag
     2821 tgccgtcgcg aaactttacc gtgcgctttg gggtggctga ggctttgctg gaagccgcat
     2881 caagtgccgt tgcagctgta aacgagccaa acgccacgca gagtccactg aattcacgcc
     2941 ggctgaggct catggtcttt acgcttcgct atacgagctc ttccaccata ccaatcgtga
     3001 aggctgcggc tgtctagtca aggaacactg cttgttcgcg ccggtgaggt gatcgactag
     3061 attgcccatg tccgctattg gcccaaagcg gacatgaggt actgcgctgc acatgtccgc
     3121 ttttgggggt aaa
//
LOCUS       DATDHO010000286         2014 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_211710, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000286 DATDHO010000000
VERSION     DATDHO010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211710"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..1639)
                     /gene="xseA"
                     /locus_tag="VIY07_05445"
     CDS             complement(200..1639)
                     /gene="xseA"
                     /locus_tag="VIY07_05445"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEY6381230.1"
                     /translation="MAEPALDNVVEWTVSELSAALRRAVEDAYGYVRVRGEISGFKGP
                     HSSGHAYFALKDEDACIEAVIWRTTYGRMRVKPEEGLEVVVTGRLTTFPARSKYQIVI
                     DSLQPAGVGALMKLLEERKRKLAAEGLFDDARKQLLPFLPEVIGVVTSPTGAVIRDIL
                     HRLEDRFPRRVLVWPVRVQGETASTEIANAIRQFNDFPQDGPLPRPDLIIVARGGGSL
                     EDLWPFNEEIVVRAAAASMIPLISAVGHETDVTLIDFAADRRAPTPTAAAEIAVPVRA
                     ELMISLADLGARKVACWRRNIDRHRKELRLLTRAMPALDELLAIPRQRLDACAGRLPR
                     ALRANAQIHHTHLTRAASRLSPRLLSHRIERCKEQTAGFSGRARRALRIILDRRVQRL
                     RSAGQLLAAYSYRGVLARGFALVRDEEGHPLRSSAAIGAGMRLDIEFSDGRVGATADE
                     ERVLPSAKSKARGRGGGEGPAGQGNLFSS"
     gene            1720..>2014
                     /locus_tag="VIY07_05450"
     CDS             1720..>2014
                     /locus_tag="VIY07_05450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6381231.1"
                     /translation="MNILIIGPGGREHALAWKIAASPLTDKLYCAPGNAGIAREAECV
                     AIDPADHKAVIAFARDRKIDLVVIGPEVPLCAGIVDDLGAAGIKAFGPTKWAAR"
BASE COUNT          414 a          653 c          608 g          339 t
ORIGIN      
        1 ggcacccctg tcacagcgca gcgcacgaag gcacccggcc gcacgacgcg gaaatcgcca
       61 tcgaggtatt ttacctctgc ctcgccgttc atcggcgacg gacggtcata gcggttaagc
      121 aacagagcct ccgattccaa gcgggttgtc cggccaaaca tagtcgttcg cccgcgccag
      181 cgaaaccctc gaattttgct caggagctga acaggttgcc ctggccggca ggcccctcgc
      241 cgccaccgcg accgcgtgcc ttgcttttcg cagacggcaa cacacgttcc tcgtccgctg
      301 tcgcgccgac acggccatcg gaaaattcga tgtcgagccg catgccggcg ccaatggcgg
      361 ccgacgagcg tagtggatga ccttcttcat cgcggacaag cgcgaatcct cgggccagca
      421 cgccacggta ggaataagcc gccagcaatt gcccggcgct ccgcaggcgc tgaacgcgac
      481 gatcgagaat aatccgcaag gcacgtcgcg cgcgcccgct gaagccagct gtctgttcct
      541 tgcagcgttc aatgcgatgc gacaacagcc gcggcgacag gcgtgacgct gcgcgcgtca
      601 agtgcgtgtg gtgaatttgg gcattggcac gcagcgcccg cggcagccgc ccggcgcagg
      661 catccagccg ctggcgtgga atcgccaaca gttcatcgag cgccggcatc gcccgcgtga
      721 gcaggcgaag ctccttccga tgtcgatcga tgtttcgccg ccagcaggca accttgcgtg
      781 cgccaagatc ggcaagggaa atcatcagtt cggcgcgcac cggaactgca atttctgcag
      841 cggcggtagg cgttggcgcg cgccgatcgg cggcaaagtc gatcagcgta acatcggtct
      901 cgtgaccgac agccgagata agcgggatca tgctcgcggc tgccgccctc acgacgatct
      961 cttcgttgaa tggccacaaa tcttcgaggg atccgccccc gcgggcaacg atgatcagat
     1021 cgggccgagg cagcggcccg tcctgaggaa aatcgttgaa ctgacgaatg gcattggcaa
     1081 tctcggtcga cgcggtttcg ccctgtaccc gtaccggcca gaccagcacg cggcgcggaa
     1141 accggtcctc aagacgatgc aaaatgtcgc ggatgactgc gccggttggc gaggtgacga
     1201 ctccgatcac ttcgggaagg aacggcaaaa gctgcttgcg cgcatcatcg aacaatcctt
     1261 cggcggcaag cttccttttg cgttcttcca gaagcttcat cagcgcgccg acaccggcgg
     1321 gctgcaggct atcgatgaca atttggtact tcgagcgggc cggaaatgtc gtcaacctgc
     1381 ccgtgacgac aacttcaagt ccctcctctg gcttgacgcg catgcggcca taggtagttc
     1441 tccagatcac ggcctcgatg caggcgtcct catccttgag agcgaaatag gcatggcccg
     1501 acgaatgcgg acccttgaag ccggaaattt ccccgcgaac gcgcacatag ccgtaagcat
     1561 cctcgacggc gcgcctgagc gcagccgaga gctccgagac ggtccattcc acaacgttat
     1621 cgagcgcagg ctctgccata ggggtcgaat ctcttgcggg cacaacgtgc catggtacac
     1681 caaaccgcaa ccatccacga aagaccagcc gcgaggctca tgaacatcct cattatcggt
     1741 cccggcggac gcgagcacgc attggcctgg aaaatcgccg ccagcccgct gaccgacaaa
     1801 ctttattgcg caccgggcaa cgcgggcatt gcgcgcgagg ctgaatgcgt ggcgatcgac
     1861 cccgctgacc acaaagcggt gatcgcattc gccagggaca gaaaaatcga cctggtcgtg
     1921 atcgggccgg aagtgccctt gtgtgccggc atcgtcgacg atctgggagc cgccggcatc
     1981 aaggcatttg gtccgaccaa atgggcggcg cgtc
//
LOCUS       DATDHO010000287         2115 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_261850, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000287 DATDHO010000000
VERSION     DATDHO010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2115
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_261850"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1396)
                     /locus_tag="VIY07_05455"
     CDS             complement(<1..1396)
                     /locus_tag="VIY07_05455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HEY6381232.1"
                     /translation="MRYIEFSVTSNFSFLRGASHPEELMVQAAHIGLAGLGLCDRNSV
                     AGVVRAHLAKQEQNLSLRYHPGARLVFADGTPDILAYPRDRTGWGRLTRLLTVGNLRA
                     KKGDCVLHLDDLLAHAFGLELIALGAPPRLLARLHEAAPHRVRLAASMLYRGHDRARL
                     ARLKEVARTTGVPLIAVNDVLYHHPDRRPLADVLTCIREKTTIDRAGRKLAANAERYL
                     KPPQEMMRLFRDVPEAIAEPLVLSDALSFSLNELRYEYPDEQVEDFDNAQDALANFTY
                     EGAASRYPQGIPDRVRTNLEHELKLIARLEYEPYFLTVYDIVRFARSKGILCQGRGSA
                     ANSAVCYCLGVTEVDPDRADLLFERFISPERREPPDIDVDFEHERREEVIQYIYGKYG
                     RDRAGIAATVISYRGRSAIREVGKAFGLSEDAIGALSSSIWGGGGGAVSKDAVTRTGL
                     DPQSRRMRQILALAH"
     gene            complement(1448..>2115)
                     /locus_tag="VIY07_05460"
     CDS             complement(1448..>2115)
                     /locus_tag="VIY07_05460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HEY6381233.1"
                     /translation="IAAGTSRPLRNPDDICALFVERLAALGDALDPGFGFDMARLSVV
                     VAEPCLSEQVGMVGGEDAADLCRLVDRLSARLGTRRVRRLTAQDSHIPELAETGLPAQ
                     VVNGDVGWNAFRQYREQANLPPRPLRLLARPEPIEAVAEVPDGPPLRFRWRRALHEVI
                     AAEGPERIEGAWWSEHGGPARDYFRVEDKSGLRFWLFRAGLYRDLAQGAAAPSWFLHG
                     TFA"
BASE COUNT          427 a          656 c          664 g          368 t
ORIGIN      
        1 catgcgcaag cgcaaggatc tggcgcatgc gccggctttg cgggtcgagg ccggttctgg
       61 tcacagcgtc cttcgaaact gcaccgcccc cgccgcccca gatcgaggac gacagggctc
      121 cgatggcgtc ctcgctcaag ccaaaggctt tgccgacctc gcggatcgcc gagcggccgc
      181 gatatgaaat aaccgtggcg gcgatgccgg cgcgatcgcg accatacttg ccgtagatat
      241 attgaatgac ctcttcgcgc cgctcgtgct cgaaatcgac gtcgatatcg ggaggctctc
      301 gccgttctgg ggaaatgaat cgttcgaaca ggaggtcggc gcgatcggga tcgacctcgg
      361 tcacgcccag acagtaacag acggcagaat tcgcagccga accgcggccc tggcaaagaa
      421 tgcccttcga gcgtgcaaac cgcacgatgt cgtaaaccgt gagaaaatag ggctcatatt
      481 ccaaccgggc gatcagcttg agttcatgct cgagattcgt ccgcaccctg tcagggatgc
      541 cctgcggata gcggctagct gcgccttcat aggtgaaatt ggccagcgca tcctgggcat
      601 tgtcgaagtc ctcgacctgt tcgtcgggat attcgtagcg cagctcattg agggagaagg
      661 aaagtgcatc gctgagcacc agcggttccg cgatcgcttc cggcacgtcg cgaaacagtc
      721 tcatcatttc ttgcggcggt ttcagatatc gctcggcatt ggcggcaagc ttgcggccag
      781 cgcgatcaat tgttgtcttc tcgcggatgc aggtgagcac gtcggcgagc ggccgccggt
      841 cgggatgatg atagaggaca tcgttgacag cgatcagcgg cacgccggtg gtgcgcgcga
      901 cttctttcag acgcgccagt cgggcgcggt cgtgcccgcg ataaagcatg gaagcggcaa
      961 gccggacgcg atgcggtgca gcttcgtgca gacgcgccag cagccgggga ggggcgccta
     1021 aggcgatcaa ttccagcccg aaggcatgcg ccagaaggtc gtccagatgc agaacacaat
     1081 cgcccttttt ggcgcgaaga ttccccacgg tgagcaagcg ggtcagcctg ccccatccgg
     1141 tgcgatcgcg cggataggcg agaatatcgg gagtcccgtc ggcgaaaacg agccgtgcgc
     1201 ccgggtgata gcgcagcgat aaattttgct cctgcttggc aaggtgggcg cgcaccacgc
     1261 cagccaccga attgcggtca cagagtccta agcccgccag cccgatatgg gcggcctgaa
     1321 ccatcagttc ttccggatgc gaggccccac gcaggaagga gaaattcgag gtaacggaaa
     1381 attcgatgta acgcatatac tgatcttttg ttgtccgggc gcgccaatcg gaatgacctg
     1441 gaacaagtca cgcaaaggtc ccgtgcagga accagcttgg cgctgctgct ccttgcgcca
     1501 agtcgcggta aagccctgcg cgaaagagcc agaatcgaag tccgcttttg tcctcgacgc
     1561 ggaaataatc ccgcgccggc ccgccgtgtt cgctccacca ggctccttcg atccgttcag
     1621 gaccttcggc tgcgatcact tcgtgcaatg cgcgccgcca tcgaaaacgt aaaggcggac
     1681 catccggcac ttccgccacg gcttcgatcg gctccggccg cgccagcaac cgcagcggac
     1741 gcggcggaag attggcctgc tcgcgatatt ggcggaacgc attccagccc acatcgccat
     1801 tgacgacttg cgcggggagg cccgtctctg ccagttcggg aatatgactg tcttgcgccg
     1861 tcagccggcg tacgcgacgc gtgcccaggc gcgcgctcag gcggtcgacc aggcgacaaa
     1921 ggtcggccgc atcctccccg ccgaccatgc caacttgttc agaaaggcag ggttcggcga
     1981 caacgaccga tagccgtgcc atgtcaaagc caaagccggg atcgagcgca tcgccgagcg
     2041 cggcgagccg ctccacgaac agcgcgcaga tgtcgtccgg attgcgcaac ggccgtgacg
     2101 tgccggcggc gatgc
//
LOCUS       DATDHO010000288         4762 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_211843, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000288 DATDHO010000000
VERSION     DATDHO010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4762
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211843"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="VIY07_05465"
     CDS             complement(<1..207)
                     /locus_tag="VIY07_05465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381234.1"
                     /translation="MKVAIVNLGQIVSGDWREPFAQGDTIIVDGEKIASVGTASAVAT
                     EAADVVIDADGMTAIPGLIDSHVHI"
     gene            complement(227..1705)
                     /locus_tag="VIY07_05470"
     CDS             complement(227..1705)
                     /locus_tag="VIY07_05470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6381235.1"
                     /translation="MTDCKTGAEHIRSLKDGRTVYIDGKLVPDVTEHQAFRLSVKSAA
                     MLYDYQAQPENIELMTFLPEGSNRRINRAWQMPRNYAEMLQRRKAMQAWARLSYGFMG
                     RSPDHLASALVGQRMGIEVFQKHGSERAKALHGYFEEASRNDYFLTYVIINPQAERAK
                     DWGEQKEELVARIVDEDSGGLTIRGAKMLGTSSIMANEVFVANLQPLKPGEEDLAFSC
                     ALPMNAKGMRVLSRKSYEAAAVSIFDNPISSRFDENDALIYFDDVKVPWERVFVYRDP
                     DMCRAQFHDTAGHIYQNYQSQIRLSVKIKFLVGLAHRITEAIGTTNIPSVRDQLGYLA
                     AHSSMVNAMMAGMEAEGSMRGEWYVPNKHFMYSAQVLTQDLYPRVVNTLRELSGGALI
                     MLPSSIHDFKEPKLKRIIELTQRAAKMGPEEKVKFLKATWDAVGSEFGSRHTQYEMFY
                     AGARFVTTGHSYRTFDWDGATGLVDSLMESYRLEDELGRKPN"
     gene            complement(1753..2376)
                     /locus_tag="VIY07_05475"
     CDS             complement(1753..2376)
                     /locus_tag="VIY07_05475"
                     /inference="COORDINATES: protein motif:HMM:NF018399.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid synthesis family protein"
                     /protein_id="HEY6381236.1"
                     /translation="MTDLFANKQKGYWEALSMQIKRTLTFIEEIAEEAGQRADPPLRK
                     VAVAAIIDNPFAGGFERDLKPLTDASAGIGRTICLLAISMLAPHKAQSYGKAAIIGVN
                     GEQEHGVSMLTTVFGNVMRDVAGGGKAWISSITKRAAAGATIDIPLAHKDALYVRSHY
                     DGITITLPDAPLPNEIALICAFANRGRPNHRVGGLAAGEIKGVDGLT"
     gene            2441..3316
                     /locus_tag="VIY07_05480"
     CDS             2441..3316
                     /locus_tag="VIY07_05480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY6381237.1"
                     /translation="MKPATFEYVVADSVVKAVNVLSEARGEAKILAGGQSLVPMLNFR
                     LVRPAILVDINRIPNLAFIEETGDTIRVGALTRHYQLEISPLVAKRLPALASAMTHVA
                     HLAIRNRGTIGGSLSHADPAAELPMMALLLNAKLHVNSSKGERTVAASDFFRDALTVD
                     LGEDEIVTEIHLPKLPPNTGWGFEEVARRAGDFALAAVAATVTASDGKIAEARIALTG
                     VGPTPVRARKAEALLRGEKIETKLIERVIEAVRVAIAPDSDLHASSDYRRHLAGVLTG
                     RAVSAAWKRATESIA"
     gene            3313..3789
                     /locus_tag="VIY07_05485"
     CDS             3313..3789
                     /locus_tag="VIY07_05485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY6381238.1"
                     /translation="MTRTRDINVTVNGKAYERAVEPRLLLADFLRQSLGLTGTHVGCE
                     HGVCGACTVLVDGDSVRACLMFAVQADGCTVETVESLGRIGKLNPLQESFHTHHALQC
                     GFCTPGMLITVMDLLKKYPLATDDEIREGISGNLCRCTGYEYIVKAIRAVKARAAS"
     gene            3786..4547
                     /locus_tag="VIY07_05490"
     CDS             3786..4547
                     /locus_tag="VIY07_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004674371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HEY6381239.1"
                     /translation="MKMHLLSGGRLRLRKSIYFPDANRSETMDVPVSCALLRHRQGNV
                     LFDTGCHPSVPDDPKARWGDLAKIMVPIMPNGDNVVTGLAGIGLQCEDIDIVVCSHLH
                     PDHCGCNTLFKRASFIIHKKEIEAARVPGAKNAGYLAGEWEQSAPTEELDAERDLFGD
                     GRIVLIPLPGHTPGTTGVLVALDRSGKFLLASDSVSVRATLDRDIIPRNTWNASALAK
                     SLAQIRRFQQQGVTVLCGHDDAQWQSLRKGADAYD"
     gene            4540..>4762
                     /locus_tag="VIY07_05495"
     CDS             4540..>4762
                     /locus_tag="VIY07_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydrogenase"
                     /protein_id="HEY6381240.1"
                     /translation="MTDGTEIHVRPKIVGEPVKRTEDPRLLTGLGSYTDDRQVARVLH
                     VAFRRSDQSHARILAIDCNAARAAPGIVAV"
BASE COUNT          918 a         1445 c         1412 g          987 t
ORIGIN      
        1 aatgtgcaca tgtgagtcga tcaggccggg gatcgcggtc ataccatcgg cgtcaatcac
       61 gacgtcagct gcctccgtcg caaccgcgga tgctgtgccg accgaagcga tcttctcgcc
      121 gtcaacgatg atcgtatcgc cttgagcaaa cggctcgcgc caatcgccgg agacgatctg
      181 gccgagattg acaatcgcga ctttcatggc cccagccgtt ccttccttaa ttcggcttgc
      241 ggccaagctc gtcttctagc cggtaggatt ccattaggct gtccacgagg cccgtagcgc
      301 catcccagtc gaaggtgcgg tagctgtggc cggtagtaac aaatcgcgcc cccgcataga
      361 acatctcata ttgtgtgtgg cgcgaaccga actcggaccc gaccgcgtcc cacgtggctt
      421 tcaggaattt caccttctct tccgggccca tcttcgctgc gcgctgcgtc aactcgatga
      481 tgcgctttag ctttggctcc ttaaagtcgt ggatcgatga cggcagcatg atcagcgcgc
      541 cgccggacaa ttcacgcagc gtgttgacga cgcgcggata gaggtcctga gtcagcacct
      601 gagcggaata catgaagtgc ttgttcggca cgtaccattc gccgcgcatc gagccttccg
      661 cctccatgcc tgccatcatg gcgttgacca tgctgctgtg cgcggcgagg tagccgagct
      721 gatcgcgcac cgaagggatg ttcgtggtac cgatcgcctc agtgatgcgg tgcgcgaggc
      781 cgaccaagaa cttgatctta actgacaagc gaatttgcga ttggtagttc tggtagatat
      841 ggccggcagt gtcgtgaaac tgggcgcggc acatgtcggg gtcgcggtac acgaacacgc
      901 gctcccacgg caccttcacg tcatcaaaat atatgagcgc gtcgttctcg tcgaagcgcg
      961 aggagatcgg gttatcgaaa atcgagacag cggccgcctc gtaggacttg cgcgacaaca
     1021 cgcgcatgcc tttagcgttc attggcaacg cgcatgaaaa ggcaaggtct tcctcgccag
     1081 gcttcagggg ctgcaagttg gcgacgaaca cctcgttcgc catgatggag ctcgtgccca
     1141 gcatcttagc gccgcggatg gtgagtccgc ctgagtcctc gtcgacgatg cgcgcgacaa
     1201 gctcttcctt ctgctcgccc cagtccttgg cgcgctcggc ctgaggattg attatcacgt
     1261 aggtgagaaa gtaatcgttc cggctcgcct cctcaaaata tccatgcaac gcctttgcgc
     1321 gctcggatcc gtgcttctgg aacacctcga tccccatgcg ttggccgact agcgcagagg
     1381 cgaggtggtc cggtgagcgc cccatgaagc cgtaggagag tcgggcccat gcctgcatcg
     1441 ctttgcgccg ctggagcatc tcggcgtagt tgcggggcat ctgccaggcg cggttgatgc
     1501 gccggttcga gccttccggc aggaacgtca ttagctcgat gttttccggc tgcgcctgat
     1561 agtcgtaaag cattgccgcc gacttcaccg aaaggcggaa cgcttgatgc tcggtgacgt
     1621 ctggcacgag cttgccgtcg atgtaaacgg tgcggccgtc cttgagcgac ctgatgtgct
     1681 ctgcacccgt cttgcaatcg gtcatggccg gctccctttt ccgtgacgcg ctcaacgctt
     1741 tcttcgccta catcatgtca gcccgtcgac gcctttgatc tcgcccgccg caaggccgcc
     1801 cacgcgatga ttggggcggc cacggttggc gaacgcgcag atgagggcga tctcgttcgg
     1861 cagcggcgca tccggcagcg tgatggtgat gccgtcgtag tgtgagcgga cataaagcgc
     1921 gtccttgtgc gcaagcggaa tatctatggt ggcgcccgcc gctgcgcgct tggtgatcga
     1981 agagatccac gctttgccgc cgcccgcaac gtcgcgcatc acgttgccga atacggtggt
     2041 gagcatcgag acgccgtgct cctgctcgcc gttaacaccg atgattgcgg ccttcccata
     2101 gctctgcgcc ttgtgaggcg cgagcatgga aatcgcgagc aagcagatag tgcgtccgat
     2161 gccggcgctg gcgtcggtga gcggtttcaa atcgcgctcg aagccgcctg cgaacggatt
     2221 gtcgataatg gcggcaaccg cgaccttgcg cagcggcgga tcggcgcgct gtccggcttc
     2281 ctccgcgatt tcctcgatga aggtcagcgt gcgcttgatc tgcatcgata atgcctccca
     2341 atatcctttt tgtttgttgg caaaaagatc ggtcacgata gactggatag tctaattatg
     2401 aaagtcagta gtcgccgaca cgttgacgag ttcttcaacc atgaaaccag caacgtttga
     2461 gtacgtggtt gccgacagcg tagtgaaggc cgtgaacgtg ctgtcggagg cccgtggcga
     2521 ggctaagatt cttgccggtg ggcaaagcct cgtcccaatg ctcaacttcc ggctggtccg
     2581 acccgcgatc cttgtcgata tcaatcgtat tcccaatctc gctttcatcg aggagacggg
     2641 cgatacgatc agagtaggcg cgctcacgcg tcattatcag cttgagattt ctccgttggt
     2701 cgcaaagcgt ctgccggcac ttgcctcggc gatgacccac gtcgcgcatt tggcaatccg
     2761 taatcgtggc accatcggcg gaagcctatc gcatgccgat ccggctgccg aacttcccat
     2821 gatggcgctt ctgctcaatg caaaactgca tgtaaattca agtaaaggcg aacgtacagt
     2881 tgcagcgtca gattttttcc gcgatgcgct taccgtcgat ctaggcgaag acgaaatcgt
     2941 aactgaaatt catttgccga agttgccgcc gaataccggc tggggcttcg aagaagtggc
     3001 tcgacgcgcc ggcgatttcg cgttagcggc cgtcgctgca accgtgacgg cctctgatgg
     3061 caagatcgcg gaagcgcgca ttgcgctaac tggcgtcggc ccgactcctg tgcgagcgcg
     3121 aaaagccgaa gcgctgcttc gcggggagaa aatcgaaaca aaactgatcg agcgcgtgat
     3181 tgaagcggtt cgtgtcgcga tcgcaccgga ttccgatctg catgcttcgt ccgactatcg
     3241 gcggcatctt gccggtgtgc ttacgggtag ggctgtcagt gcggcatgga aacgcgcgac
     3301 cgagagtatc gcatgacgag aacacgcgac atcaatgtta ccgtcaatgg caaggcctac
     3361 gaacgtgcag tcgagccgcg gctgctgctc gccgatttcc tgcgccagtc actggggctt
     3421 accggtacgc atgtcggctg cgagcacggc gtttgcggcg cttgcacggt actggtcgat
     3481 ggcgacagcg ttcgagcgtg cttgatgttt gcggtgcagg ccgatggctg cacggtcgag
     3541 acggtcgaaa gccttggccg catcggcaag ctcaacccct tgcaggagtc cttccacacg
     3601 catcacgccc tgcaatgcgg gttctgtacc cccggcatgc tcatcaccgt gatggatctt
     3661 ttgaaaaaat atccgctcgc cacggacgat gagatccgcg aaggcatctc cggcaatctc
     3721 tgtcgctgca ccggctatga gtacattgtc aaagcaatcc gcgcagtgaa agccagagcc
     3781 gcatcatgaa aatgcatctt ctttccggtg gccgactgcg cctgcgcaag agtatctatt
     3841 ttccggacgc caaccgcagt gagaccatgg atgttccggt ctcctgcgcg ctcttgcggc
     3901 accgtcaagg caacgtcctg ttcgacaccg gctgccatcc gtcggtgccg gacgatccga
     3961 aggcgcgctg gggcgatctc gcgaagatca tggtgccgat catgccgaac ggcgacaatg
     4021 tggtgacggg tctcgccggc attggcttgc aatgcgaaga catcgacatt gtcgtttgct
     4081 cacatctgca tcccgaccac tgtggctgca acacgctgtt caaacgcgcg agcttcatca
     4141 ttcacaaaaa agaaatcgaa gcggcacgcg tgccgggcgc caagaatgcc ggttatcttg
     4201 cgggggagtg ggagcaatcg gcgccgactg aggaactcga cgccgagcgc gacctttttg
     4261 gtgacgggcg catcgtcctg atcccgctgc ccggccacac gccgggcacg accggggtgc
     4321 ttgtcgccct cgaccgctcc ggcaaattcc tacttgcctc cgactccgtg agcgtgcgcg
     4381 ccacgctcga ccgcgacatc atcccacgca atacctggaa cgcctccgca ctcgccaaat
     4441 cgctcgccca aatcagacgc ttccagcagc agggcgttac cgtgctatgc ggccacgacg
     4501 acgcacagtg gcaaagcttg cgcaaaggtg cggacgccta tgactgacgg caccgaaatc
     4561 cacgtgcggc caaagatcgt cggcgaaccc gttaagcgca ccgaggatcc gcgtttgctt
     4621 accggactcg gcagctacac tgatgaccga caggtcgctc gcgtgctgca cgttgccttc
     4681 cgtcgcagcg atcagtcgca cgcgcgcatc ctcgcaatcg attgcaacgc cgcgcgcgct
     4741 gcgccgggca ttgtcgccgt gt
//
LOCUS       DATDHO010000289         5807 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_310870, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000289 DATDHO010000000
VERSION     DATDHO010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5807)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5807)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5807
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_310870"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..757
                     /locus_tag="VIY07_05500"
     CDS             <1..757
                     /locus_tag="VIY07_05500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HEY6381241.1"
                     /translation="EVLKVDNSAVRQKQLEKLARLKAERDPVPLKEALDALTRAADRG
                     NGNLLALAVDAARAKATVGEISSALEKVFGRHRAEIKAITGVYKREVGMTDAVERVRS
                     AVEAFETAEGRRPRLLVAKIGQDGHDRGQKVIASAFADLGFDVDIGPLFATPAEAARQ
                     AIENDVHILGVSSLAAAHLTLVPELKSELTKQGRGDIMIVVGGVVPPQDYDALLQAGA
                     EAIFPPGTVIAEAAEKLLKTLNKRLGHGKEAAE"
     gene            754..1296
                     /locus_tag="VIY07_05505"
     CDS             754..1296
                     /locus_tag="VIY07_05505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381242.1"
                     /translation="MSSVTVRAAAAALWGLSLCSCIDSSGPILTDARPLFGQQLQLQF
                     YTLRKGFADEPEQALFKWDGERYIHAGGGMTDITAFTVHRLEGRAYIVQSSAAKRPNI
                     IEYAVAHELTGGVYQVTPIDENDADGATRARNCTRIDDSPCRITSQRQLIAFARATEA
                     RQKGEGGLVLRLANSSESRR"
     gene            1305..2291
                     /gene="meaB"
                     /locus_tag="VIY07_05510"
     CDS             1305..2291
                     /gene="meaB"
                     /locus_tag="VIY07_05510"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HEY6381243.1"
                     /translation="MASRSLPPSDLVRGIRAGDRATLARAITLIESKRADHRRTAHHL
                     VQELLPRTGKAVRLGITGAPGVGKSTTIDVLGTYLTGKGHKVAVLAVDPSSTRTGGSI
                     LGDKTRMARLSSDPDAFVRPSPSSGTLGGVAAKTRETMLVCEAAGYDVVMVETVGIGQ
                     SETAVADMTDCFLVLMLPGAGDELQGLKKGIVELADMIAVNKADGNNVERARLAAAEY
                     RAALNILTPHSPTWSPPVVTYSALAQDGIAELWAQVLSHKAKMTESGELAARRRHQQV
                     KWMWTMLEERLTARLRSDASVRTKLRQAEAQVAAGKLAPMLAVEEIAQLLGV"
     gene            2291..2959
                     /locus_tag="VIY07_05515"
     CDS             2291..2959
                     /locus_tag="VIY07_05515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HEY6381244.1"
                     /translation="MAATILVTGFGPFPGAPFNPTGALVEKLARLRRPILADVTIVPH
                     IFRTSYAVVDDELPKLIAKHKPDALLMFGLAPRAKAVRIETRARNALTSFPDVSGHSL
                     NRRSIVSGGPPALPMPARTRHLFAAARNARIPVLVSRDAGRYLCNYLCWRASEASGQN
                     GPRFAAFVHVPLTSRTARRSKKRGVLTLDELLRAAEQFLVVLATATQRTPRLGRKAAV
                     VAQS"
     gene            2956..3738
                     /locus_tag="VIY07_05520"
     CDS             2956..3738
                     /locus_tag="VIY07_05520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3750 domain-containing protein"
                     /protein_id="HEY6381245.1"
                     /translation="MTFNQRSQSRTVVMLIILVVFLAPILARALIYAVGNNPRSWRDA
                     DWSSTGILPAASDFQPARIVVFTSTAGAWKGVFSVHSWIAVKRANETRWSRYDVVGWG
                     NPVRVNNWPVDGRWYGNAPVILADIAGPEAEMLIPRIEATVKAYDYAHAGDYRIWPGP
                     NSNSFIAAVLRATPELGVMLPPNAIGRDFRGSFYAGRTDSGTGVELNLRGYAGVKVGW
                     VEGVEVNLLGLVAGFDLRHPGIKLPGFGRIGIEPPVTTAQAR"
     gene            3835..4806
                     /gene="arsS"
                     /locus_tag="VIY07_05525"
     CDS             3835..4806
                     /gene="arsS"
                     /locus_tag="VIY07_05525"
                     /inference="COORDINATES: protein motif:HMM:TIGR04167.1"
                     /note="Some members of this family are selenoproteins;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenosugar biosynthesis radical SAM
                     (seleno)protein ArsS"
                     /protein_id="HEY6381246.1"
                     /translation="MRDTAPLLDKIRFPAIRRGKLETLQVNVGYRCNQSCFHCHVNAG
                     PTRTEEMTSEIADMVLEFLRRQKIAILDITGGAPELNPHFRRLVQEARRLGSNVIDRC
                     NLTILEQPGQEELAEFLASERVEVVASMPCYLRDNVEHQRGKGVFDASIRGLRRLNAL
                     GYGRDPTLTLNLVYNPQGPSLPPPQAALEIDYKRVLGEQYGISFNKLYVLANMPIQRF
                     GSTLVTKGEFETYLGLLQDAHLDANLAGVMCRNLISVDWRGYIYDCDFNQMLDLPMSR
                     GPHHRVHLADLLDDDIDGNPVRVAGHCYGCTAGQGSSCGGALKEAAE"
     gene            4803..5501
                     /locus_tag="VIY07_05530"
     CDS             4803..5501
                     /locus_tag="VIY07_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007067760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04283 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEY6381247.1"
                     /translation="MSGARLSIIMPVLNEAANIEEALAALKPYQERGVEVIVVDGGSR
                     DTTPARARPFADHVCVASRGRAMQMNAGRAVALGEVFLFLHADTRLPDNADALLLDGL
                     ARSGRVWGRFDVRFDSDGLLTLVAAMMNLRSRLTGIATGDQALFVTRAAFDAAGGFPP
                     IPLMEDISLSKHLKRIGPPLCLRARVTTSARRWQANGTLRTILLMWRLRLAYFFGADP
                     ARLARQYGYASAEQ"
     gene            5482..>5807
                     /locus_tag="VIY07_05535"
     CDS             5482..>5807
                     /locus_tag="VIY07_05535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381248.1"
                     /translation="MPPPNNNFVSIAILAKAPIPGLAKTRLIPAIGAHAAAVLQERLT
                     ERAVATALAANVGPVTLWCAPDSTHTSFLKLVAGSRITLRPQPDGDLGARMLAATAAS
                     RGPVLV"
BASE COUNT         1101 a         1780 c         1764 g         1162 t
ORIGIN      
        1 cgaagtatta aaggtggata attccgccgt gcggcagaag cagctcgaga agcttgcgcg
       61 actcaaagcc gagcgcgatc ctgttccatt aaaagaggcg cttgatgcgc tcacccgcgc
      121 cgccgatcga ggcaacggca acctcctggc actcgctgtg gatgccgcgc gggccaaagc
      181 gacggttggc gaaatttcct cggcgctgga aaaggtcttt ggccgtcatc gcgcagagat
      241 caaggccatt accggggttt acaagcggga ggtcgggatg accgacgccg tcgaacgagt
      301 ccgaagcgca gtcgaggcat tcgaaactgc cgagggccgc cgcccgcgct tgttggtcgc
      361 caaaatcggg caggatggcc acgaccgcgg tcagaaggtg attgcttcgg ccttcgcgga
      421 tctcggtttc gacgttgaca tcggacccct gtttgcaacg cccgcggaag cggcgcggca
      481 ggcaatcgag aacgacgtgc acattcttgg cgtgtcttca ttggccgctg cccacctgac
      541 cctggtgccg gaattgaagt ccgaactcac caagcaaggt cggggcgaca tcatgatcgt
      601 ggttggtggc gtggtgccgc cccaggacta cgatgccctc ctgcaggcgg gcgctgaagc
      661 tatatttccc ccgggcacgg taatcgccga ggccgccgaa aagctcctca agactttgaa
      721 caaacggctc ggtcacggca aagaggcggc cgagtgagtt cagtcaccgt ccgcgcggcc
      781 gcagccgcac tttgggggct atcgttatgc agttgtattg attcctcggg tccgattctg
      841 accgacgcac gcccgctgtt cggccaacaa ctgcaactgc agttctatac gctacgcaag
      901 ggcttcgcgg atgagcccga acaagccttg ttcaagtggg atggcgagcg atacatccat
      961 gccggcggtg gcatgaccga cattaccgcc tttactgtgc accggcttga aggccgcgcc
     1021 tatatcgtgc agagctcggc agccaaacgg ccaaatatca tcgaatacgc ggtcgcacat
     1081 gaactgaccg gaggcgtcta tcaggttact cccatcgacg agaatgatgc cgacggcgct
     1141 actcgcgcgc gcaattgcac gcggattgac gattctcctt gccggatcac gtcacaaagg
     1201 caactgatcg cctttgcacg cgccactgag gcccggcaga aaggtgaagg cggtctggtg
     1261 cttcgccttg cgaatagctc ggaatctcgg cgctagagac atcgatggct tcacgcagtc
     1321 tcccaccttc agatctggtt cggggcatcc gcgcgggcga ccgcgcgact ctggcgcgcg
     1381 caatcacgct catcgagagc aagcgcgccg accaccgcag aacagcgcat cacctcgtgc
     1441 aggagctttt gccgcgcacg ggcaaggccg ttcgcctcgg catcactggt gcaccggggg
     1501 tcggtaaatc aacgacaatc gacgtccttg gcacttacct cacgggcaaa gggcacaagg
     1561 ttgccgtgct tgcggtcgat ccgtcttcga ctcgcacagg tggctcaatt ctcggcgaca
     1621 agacgcgcat ggcgcggctc tcaagcgacc ccgacgcatt cgtccgacca tcgccatctt
     1681 ccgggacgct cggtggcgtc gccgccaaga cacgcgaaac aatgcttgtg tgcgaggctg
     1741 ccggctatga tgtggtgatg gtggagaccg ttggcatcgg ccaatcggaa accgcagttg
     1801 ccgacatgac cgattgtttt cttgttctga tgctgccagg tgccggcgat gaattgcagg
     1861 gtctcaaaaa aggcatcgtc gaacttgccg atatgattgc ggtcaacaag gccgatggca
     1921 acaacgttga gcgagcccgg ctggcagcag cggaatatcg tgcggcactc aatattttga
     1981 cgccgcactc tccgacatgg tcgccgccgg tcgtcaccta ctctgcgctc gctcaagacg
     2041 gcatcgcgga attgtgggct caagttctct cgcacaaagc aaaaatgacg gaatcggggg
     2101 agttagcggc gcgacggcga caccaacagg tcaaatggat gtggacgatg ctcgaggagc
     2161 ggcttaccgc acggctgcgc agtgacgcgt ctgtgcggac gaaattgcgg caggccgaag
     2221 cgcaggtggc cgcaggaaaa cttgcgccca tgctcgcggt cgaagaaatc gcgcaactgc
     2281 ttggcgtctg atggccgcaa cgatcctcgt caccggcttc gggccatttc caggcgcccc
     2341 attcaacccg acaggagcac tggtcgaaaa gctggcccgg ctacgcaggc ccatcttggc
     2401 cgatgtgacc atcgtgccgc atatttttcg gaccagttac gccgttgttg acgacgaact
     2461 cccaaagctg atcgcaaagc acaagcccga tgcgcttctc atgttcgggc tcgccccgcg
     2521 cgcaaaggcg gtccgcatcg aaacgcgcgc acggaatgcg ctgacgtcct ttccggatgt
     2581 ctcgggccat tcgttgaata ggcggtcaat tgtcagcggc ggtccccctg ccttgccgat
     2641 gcccgcgcga acccgacatt tgtttgctgc cgcccgcaac gcacggatcc ccgtcctggt
     2701 ctcgcgcgac gcgggtcgct acctctgcaa ttatctgtgc tggcgcgcga gcgaggcgtc
     2761 agggcaaaat ggcccgcgtt ttgctgcttt cgtgcacgtg cccctcacct cacgcaccgc
     2821 tcgaaggtcg aaaaagcgcg gggttttgac cctcgacgag cttttacgtg ccgcggagca
     2881 attcctggtt gtccttgcaa ctgcaacgca acggacgcca cgtttaggcc ggaaagccgc
     2941 tgtagtggcg cagtcatgac cttcaatcag cgctcccaat caagaactgt cgtgatgctc
     3001 atcattctgg tcgtctttct tgcacccatt ctcgcgcgcg cactcatcta cgcagtcggc
     3061 aacaatccgc gctcatggcg cgatgccgat tggtcgagca cggggatcct gcccgcagca
     3121 agtgactttc aacccgcccg tatcgtcgta ttcactagca ccgcgggcgc gtggaaaggc
     3181 gtcttctcgg tgcacagctg gatcgctgtg aagcgcgcga atgaaacgcg ctggagtcgc
     3241 tatgacgtcg ttggctgggg caatcccgtg cgcgtgaaca actggccggt cgacggccgc
     3301 tggtacggga acgccccggt gattctggca gacatcgccg gccccgaggc tgaaatgctc
     3361 atcccgcgca tcgaagcgac cgtaaaggcc tacgattatg cgcatgccgg cgactaccga
     3421 atttggccgg gaccgaacag caacagcttc atcgcggccg ttctgcgcgc caccccggag
     3481 ttgggcgtga tgttgccgcc aaacgcgatc gggcgcgact tccggggcag cttttatgcg
     3541 ggacgaaccg acagcggaac gggagtcgaa ctgaatctgc gcgggtacgc gggcgtcaag
     3601 gtaggatggg tcgaaggggt cgaggtcaat ctgttgggcc tggttgccgg cttcgacctg
     3661 cgtcatccgg gtatcaagtt gcccggcttc ggccgtatcg gcatcgaacc gcctgtgaca
     3721 accgcacaag cgcgttgaag cgagccgatc tcacggcgat ttgtcctgca ggaccttttg
     3781 ctaggatgac gtggtggctc gcgccatggc aacttggcca agttgaggct gccgatgcgc
     3841 gatacggctc cgttgctcga caagattcgt tttcccgcca tccgtcgcgg caagcttgaa
     3901 acgctgcagg tcaacgttgg ctaccgctgc aaccagtcct gttttcactg ccacgtcaat
     3961 gcgggtccta cccgaaccga ggagatgacg agcgaaatcg cggatatggt gctggaattt
     4021 cttcgccgtc agaagattgc aatcctcgac atcacgggcg gcgccccaga gctcaatcca
     4081 cactttcgga gattggtgca ggaagcgcgc aggctgggct cgaatgtcat cgaccgctgc
     4141 aatctcacga ttctggagca acctggccag gaagagctgg cggaattcct ggcgagcgag
     4201 cgcgtcgagg tggttgcgtc aatgccgtgc tacctgcgag acaacgtcga gcatcagcgt
     4261 ggcaagggcg tgttcgatgc ttcgatccgc ggccttcggc gcctcaatgc actcggctac
     4321 gggcgcgacc cgacactgac tctcaatctc gtttacaatc cgcagggacc atcgctgcct
     4381 ccgccgcagg ccgcgctgga aatcgattac aagcgggtgc tcggtgagca atatggcatt
     4441 tcgtttaaca aactttatgt cctcgccaac atgccaattc agcgtttcgg ctccactctc
     4501 gtcacgaagg gcgaattcga aacctatctt ggtctcctcc aagatgccca tctcgatgcc
     4561 aaccttgccg gtgtcatgtg ccgcaacctg atttcagttg attggcgcgg ctacatctat
     4621 gattgcgatt tcaaccagat gcttgatctg ccgatgtcgc gggggccgca tcaccgtgtg
     4681 caccttgccg atctgctgga cgatgatatc gatggcaacc cggttcgggt cgcaggccac
     4741 tgctacggtt gcaccgcggg ccaaggctca agctgcggcg gcgctttgaa agaggcggcg
     4801 gaatgagcgg cgcgagatta tcgatcatca tgccggtgct gaacgaggcc gcaaatatcg
     4861 aggaagcatt ggcggcgctg aagccttacc aggagcgtgg cgttgaagtc atcgtcgtgg
     4921 acggagggag ccgcgatacc acgcctgccc gcgcccgtcc ttttgccgat cacgtttgcg
     4981 tcgcatcgcg cggtcgcgcg atgcagatga atgccggtcg cgcggttgcg cttggcgagg
     5041 tttttttgtt cctgcacgcg gatacccgcc ttccggataa tgcggatgcc ctccttcttg
     5101 atggccttgc ccgctccggc cgcgtctggg gacgctttga cgtgcgcttt gattctgatg
     5161 ggttgcttac cctggtcgca gccatgatga acctgcgctc gcgcttgacc ggtattgcta
     5221 ccggcgatca ggcgttgttt gtcacgcgcg ctgctttcga tgccgccggg ggcttcccgc
     5281 caattcccct tatggaagat atttcgctgt cgaagcatct gaagcgcatt gggcctccgc
     5341 tttgcctccg cgcacgtgtt acgacctcag cacgccgctg gcaggcaaac gggacactcc
     5401 gcacgatcct gttgatgtgg cggctgcggc tggcctactt cttcggcgcc gaccccgcgc
     5461 ggcttgcgcg acagtacggc tatgcctccg ccgaacaata acttcgtctc gattgctatt
     5521 ctggcgaaag ctccaattcc cgggctcgcc aaaactcgtc ttattccggc aattggcgcc
     5581 cacgcggcgg cggtgctgca ggagcgcctg acggagcgcg cggttgcgac cgctctcgcc
     5641 gccaatgtgg gacccgttac gctgtggtgc gcgcctgaca gcacacacac ttcgtttctc
     5701 aaactggtcg caggctcgcg cattactctc aggccgcagc ctgatggcga tctgggagcg
     5761 cgcatgctgg cggcaacagc cgcgagtcgt ggacccgtac tggtaat
//
LOCUS       DATDHO010000290         1958 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_457708, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000290 DATDHO010000000
VERSION     DATDHO010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_457708"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="VIY07_05540"
     CDS             complement(<1..381)
                     /locus_tag="VIY07_05540"
                     /inference="COORDINATES: protein motif:HMM:NF018960.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEY6381249.1"
                     /translation="MLSARAFRAQLVMLGQRELFDYWLRAADGRRMPARSDLDPLKVP
                     RLLPHMGLIDLRTGPAEAAFRLAGTRLHEIYGQEITGLRADDVFSGDAAPYWRRVHDR
                     VAERRVPLHGVVKGPARGRDHIVLF"
     gene            complement(614..1021)
                     /locus_tag="VIY07_05545"
     CDS             complement(614..1021)
                     /locus_tag="VIY07_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008190661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HEY6381250.1"
                     /translation="METNLEKNELVELTAEIVSAYVSNNTVVAGDLPGVIHNVFDALS
                     RASTATGLPIREELRPAVPLKKSVTPEYIVCLEDGKKFKSLKRHLRTHYDLSPEDYRE
                     KWGLPHDYPMVAPNYAAARSDLAKRMGLGQRRR"
     gene            1516..>1958
                     /gene="msrB"
                     /locus_tag="VIY07_05550"
     CDS             1516..>1958
                     /gene="msrB"
                     /locus_tag="VIY07_05550"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019997811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEY6381251.1"
                     /translation="MSKAETRGKTDQTKVAMSDEEWRSKLTPEQFYVTREHGTERAFS
                     HPYYEEKDAGMYRCVCCGEPVFSSETKFDSGTGWPSFYAPATRGAVSEHDDRSFFMRR
                     TEVRCAKCDAHLGHVFPDGPKPTGARYCINGVALQLDKDAKPAKG"
BASE COUNT          404 a          590 c          575 g          389 t
ORIGIN      
        1 aaacagcacg atatgatcgc ggccacgggc cgggcctttg accacgccgt ggagcggaac
       61 gcgcctctcc gccacgcggt catgaacgcg gcgccaatag ggggcggcat cgccggaaaa
      121 gacgtcgtcg gcgcgcagac ccgtgatctc ctgcccgtag atctcgtgga gcctcgtgcc
      181 cgcgagcctg aacgcagcct cggcggggcc ggtcctcaag tcgatcagtc ccatatgagg
      241 caggaggcgc ggcaccttca gcggatcgag atcagaccgc gcgggcatgc gccgtccatc
      301 ggctgcgcgg agccaataat cgaacagttc gcgctgcccc agcatgacca gctgggcccg
      361 aaaagcgcgt gccgacagca tttccctccc ccgccgcaag gccgcgaaac ggtcccgcga
      421 atcacttgcc tgtctcgact atgtggagtt cggtgttacc gcgcaagcca agaaagccag
      481 attcactagg aatcacactg gattgtggta acacttatgg cagcgacccg atcttggaga
      541 aggcgatcgg cgcgccgcgt ctggctcgag aggcgacgcg ccgatgcggc gcctctcgcg
      601 cttaagcggc agactagcgg cgcctctggc caagacccat gcgcttggcg agatcggagc
      661 gggccgcggc gtagttcggg gcaaccatcg ggtaatcgtg tgggagaccc catttttcgc
      721 gatagtcctc cggcgacagg tcgtaatgcg tgcgcaagtg acgcttcagc gatttgaact
      781 ttttgccgtc ctcgagacag acgatgtatt cgggcgtgac cgatttcttc aacggcacgg
      841 cgggtctcaa ttcttcgcgg attggcaggc ccgttgccgt tgacgctctg ctcagcgcgt
      901 cgaagacgtt atggatgacg ccgggaaggt cacccgcgac aacagtgttg ttgctcacat
      961 aggcggagac gatctcggcc gtgagctcaa cgagttcgtt cttctccaga ttcgtttcca
     1021 tgaaaaactc ctcagtcctg gccggtcgtc tgtcccaaca cccacctcaa gtcctctatt
     1081 cgggtgctcg cgtgtttact tggcgcgcac gtctttagag tcaccagatt acgccgtttt
     1141 tatgacgagt agttacaatg tctatcaact acaaaatata gatggatcca acgtttgaag
     1201 ctgatctgtt ttctatcgtc agtttctgca tgaatcggct atgcggctgt tctcaatgaa
     1261 gactggcgcc tagccagctc gataagcgaa gcctagactt cgcttagcca aattggttcc
     1321 catcgctgct caacattagt cggcagcgtg ctttgactat ttagcgattt tccccgttcg
     1381 cccaaacaag gcgaagatgc aacttgatcg ggaatcaacc ttgcgtgagc ggcgcatcgc
     1441 ccacttcggt cgagcatccc cgataactat atttgcaacc gaataaatgc cgaccaaccc
     1501 gaaagtgttc catcgatgag caaagctgaa acgcgcggaa agaccgatca gaccaaggtc
     1561 gcgatgtcgg acgaggagtg gcgcagcaag cttacgcccg agcagttcta cgtgacgcga
     1621 gagcacggga ccgagcgggc cttcagccac ccctattacg aggagaagga cgccggcatg
     1681 tatcgttgcg tctgctgcgg cgagcccgtg ttcagctccg agaccaaatt cgattcaggc
     1741 acgggctggc cgagcttcta cgcgccggcg acccgcggcg cggtcagcga gcacgatgac
     1801 cggtcgttct ttatgcgccg caccgaggtt cgctgcgcca aatgcgacgc gcatctcggt
     1861 cacgtcttcc cggatggacc gaagccgacg ggtgcgcgtt attgcatcaa cggtgtcgcc
     1921 ttacagctcg acaaggatgc gaagcccgcc aagggcag
//
LOCUS       DATDHO010000291         1597 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_211981, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000291 DATDHO010000000
VERSION     DATDHO010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1597
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_211981"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1487
                     /locus_tag="VIY07_05555"
     CDS             171..1487
                     /locus_tag="VIY07_05555"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY6381252.1"
                     /translation="MSDLSTRTKPRVVIVGGGFGGLSAAKGLAHAPFEVTLIDRNNHH
                     LFQPLLYQVATAALSPADIAAPIRSILGKQRNVRIMLAEVSGVDTARKEVIADGRRVG
                     YDYLVLATGARHAYFGHDDWAIFAPGLKTIDDATYLRRRILLAFERAENETDAEERRR
                     LTTFVVVGGGPTGVEMAGAIAELAKRALASDFRSIDPLCANIILVEAAQRLLTPFDPL
                     LSDKARLSLAQLGVEVRLGVSVTDCSCEGVRLGDEFIPTRTIVWAAGVMASPAGRWLG
                     AEIDRAGRVKVRADLSVSGHPEVFVIGDTAAVTDTNGVILPGVAPVAKQQGLYVARAL
                     TARHQGRTAAVFRYRDFGSLATIGRSRAVAQFGKLRLSGFPAWALWSVAHVYFLIGFR
                     NRFVVALNWAWSYVTFQRGSRLITGLYARLEDLRQLPKPDLRSKAS"
     gene            1525..>1597
                     /locus_tag="VIY07_05560"
     CDS             1525..>1597
                     /locus_tag="VIY07_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY6381253.1"
                     /translation="MEMHQVRYFLAVARTLNFTRAAEE"
BASE COUNT          303 a          478 c          463 g          353 t
ORIGIN      
        1 accacaaaaa tcggcagtct tcatcaacga tcaattgcga gcgtgaggcg gtcaaccaag
       61 gcatgacgaa cgccccggac tttgagccaa aattcttcaa cctgctgatt tccgatgacg
      121 ttgttgtcgt tttggaaaca cagcagtggt gagcaagcat ggagccgacg atgagcgacc
      181 tgagcacacg gaccaaaccc cgagttgtaa ttgttggcgg cggctttggc gggctgtcgg
      241 ctgccaaagg tcttgcgcac gctccgtttg aggtcacatt aatcgatcgc aacaaccacc
      301 atctgtttca acccctgctc tatcaggtcg caactgccgc gctttcgcct gctgatattg
      361 cggcgcccat tcgcagcatc ctcggtaaac aacgaaatgt caggatcatg ctcgcggaag
      421 tgtcgggggt cgacactgca cgcaaggagg tgatcgcaga cggaaggcgt gtaggttacg
      481 attacctggt attggccacc ggtgcacgtc atgcgtattt cggccacgac gactgggcaa
      541 tatttgcacc cgggctgaaa accatcgacg acgcaactta cttgcgtcgc cgcatcctgc
      601 ttgctttcga gcgagccgaa aacgagaccg acgccgaaga gcgacgacgg ctgacgactt
      661 tcgtggtcgt aggcggtggc ccgaccggtg tcgagatggc cggtgccatt gccgaacttg
      721 ccaagcgggc tttggcctct gacttccggt caatcgatcc gctctgcgcc aacatcattc
      781 tcgtcgaggc cgcccaacgc ctacttaccc cgttcgaccc cttgctatcg gataaggccc
      841 gcctctcgct cgcacagctc ggtgttgaag tccgccttgg agtatctgtc accgattgca
      901 gctgtgaagg cgtgcgcctg ggcgatgaat tcattccgac tcggactatt gtctgggccg
      961 ccggcgtgat ggcatctccg gcgggccgtt ggctcggcgc tgaaatcgat cgcgccggaa
     1021 gggtgaaagt tcgcgccgat ctgtcggtgt ccggtcatcc agaagtcttc gtgatcggcg
     1081 acactgcggc ggtcacggac actaatggag tcatcctccc cggcgtcgcc cctgtggcca
     1141 aacaacaggg cctgtacgtc gctcgcgcac tcacggcgcg acatcaagga cgtacagccg
     1201 cggtatttcg ctatcgcgat ttcggttcgc tcgccactat cggccgctca cgggctgtcg
     1261 cccagttcgg caaactccga ctttcgggct tcccggcctg ggcgctctgg agcgttgccc
     1321 atgtctactt tctgattggt ttccgaaacc ggtttgtggt cgccctcaat tgggcgtgga
     1381 gctacgttac cttccaaaga ggcagtcgcc tcatcaccgg cctgtatgcg cgtctggagg
     1441 acttgcgcca gttgccgaag cccgatcttc gttcgaaagc gagctaaaat attctgtttt
     1501 gttgacgtcc ggggggacgt tcgcatggag atgcaccagg ttcgatactt cctcgccgtc
     1561 gcgcggacgc tgaatttcac ccgtgcggct gaagagt
//
LOCUS       DATDHO010000292         2346 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_212066, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000292 DATDHO010000000
VERSION     DATDHO010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2346
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212066"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..905)
                     /gene="trpA"
                     /locus_tag="VIY07_05565"
     CDS             complement(66..905)
                     /gene="trpA"
                     /locus_tag="VIY07_05565"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEY6381254.1"
                     /translation="MSTRIERRFAALKKESRAALVTFTMAGDPDYDTSLAIAKALPKA
                     GADIIELGMPFTDPMADGPAIQAAGLRALKSGQRMTRTLQLVREFRKDDNETPIVLMG
                     YYNPIYIYGNERFLADARAAGVDGLIVVDLPPEEDEELCLPVLQAGLNFIRLATPTTD
                     DKRLPKVLTNTSGFVYYVSITGITGAAAPDTAKVTAAVARIKRHTKLPVAVGFGVKTA
                     DHARAIAEGADGVVVGSALVEALRQSLDTKGNAGSGTVKAVTGLVSALAQGVHAARRV
                     AAE"
     gene            complement(902..2119)
                     /gene="trpB"
                     /locus_tag="VIY07_05570"
     CDS             complement(902..2119)
                     /gene="trpB"
                     /locus_tag="VIY07_05570"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEY6381255.1"
                     /translation="MTVQQPNSFRTGPDERGQFGIYGGRFVAETLMPLILELEKAYTK
                     AKTDPSFQKEMNHHLATYVGRPSPLYFAQRFTEHCGGAKIYFKREDLNHTGAHKVNNV
                     LGQIMLALRMGKTRIIAETGAGMHGVATATLCAKFGLPCIVYMGAVDVERQKPNVLRM
                     RILGAEVRPVESGARTLKDAMNEALRDWVTNVSDTFYCIGTVAGPHPYPAMVRDFQSI
                     IGHETREQLLAAEGRLPDSLIACIGGGSNAMGLFHPFLDERSIEIYGVEAAGHGLNSK
                     HAASIAGGRPGVLHGNRTYLLMNDDGQIEEAHSISAGLDYPGIGPEHAWLNDVGRVKF
                     LSATDDEAVAAFRLCSELEGIIPALEAAHALAKVPELAAKKPKDHLMVVNLSGRGDKD
                     LASVEAFLEGRKR"
     gene            complement(2132..>2346)
                     /locus_tag="VIY07_05575"
     CDS             complement(2132..>2346)
                     /locus_tag="VIY07_05575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381256.1"
                     /translation="SGGLDADNVLEALRITRAPGVDVSSGVERSPGEKDPDKIRAFIR
                     AARVAEAEHFSAPLQLGESSIVRSVK"
BASE COUNT          446 a          731 c          687 g          482 t
ORIGIN      
        1 cagttcatag ccctgctcta tacggtcgat tcgaccaaat tataacaacg agcggcgcgg
       61 gaggtttact ccgccgcaac acgacgggca gcatgcacac cttgcgccag cgccgatacc
      121 agtccggtca ccgccttgac cgttcccgag ccggcgttgc ctttcgtatc caggctttgc
      181 cgcagcgcct cgaccagcgc ggaccccacc accacgccat cagcgccctc ggcaatggca
      241 cgcgcatgat cggcggtctt taccccgaac ccaaccgcta caggcagctt tgtgtgacgt
      301 tttatccgcg cgactgccgc cgtaaccttg gcggtatctg gcgcagcggc acctgtaata
      361 ccggtaatag acacgtaata cacaaagccc gacgtgttgg tgagaacctt gggcagccgc
      421 ttgtcgtcag ttgtgggcgt ggccagccgg atgaagttga gccccgcctg taataccgga
      481 agacatagct cctcgtcctc ctcgggcggc aggtccacga caatgagccc gtcgacgccg
      541 gccgccctgg catcggcgag aaaacgttcg ttgccgtaaa tgtagatcgg gttgtagtag
      601 cccatcaaca cgatgggcgt ttcgttatcg tctttgcgaa attcgcgtac gagttggagc
      661 gtcctggtca tgcgctgacc cgatttgagc gcgcgcagac ccgccgcctg gatcgcaggg
      721 ccgtcggcca tcgggtcggt gaagggcatg ccgagctcga tgatgtcggc tcccgctttc
      781 ggcaaagctt tggcgattgc gagcgaggtg tcgtagtccg gatcgcctgc catagtgaaa
      841 gtcacgagcg cagcacggct ctcttttttc agggcagcga agcgcctctc gattcgcgtg
      901 ctcatcgctt cctgccttcg agaaaggctt cgaccgacgc caaatccttg tcaccccgac
      961 ccgaaagatt gacgaccatc aagtgatctt tcggtttctt cgctgcaagc tcgggtactt
     1021 ttgccaaggc gtgcgcggcc tccagcgccg gaatgatccc ttccagctcg ctgcacaacc
     1081 ggaacgcggc gacggcttcg tcgtcggttg cagacagaaa cttcactcga cccacgtcat
     1141 tcagccaggc gtgttcggga ccaatgcctg gataatcgag gcctgccgaa atcgagtgcg
     1201 cttcctcgat ctggccgtcg tcattcatca gcaagtaggt gcggttaccg tgaagcacgc
     1261 cagggcgtcc gccggcgatc gaggcagcat gcttgctgtt gagtccgtga ccggccgctt
     1321 cgacgccgta gatttcgatc gaccgctcgt cgaggaacgg gtggaagaga cccatcgcgt
     1381 tcgaaccccc gccgatgcag gcgatcaggg aatcgggaag ccggccttcg gcagccagca
     1441 gctgctcgcg cgtttcatgg ccgataatcg actggaagtc ccgtaccatt gcgggataag
     1501 gatgcggacc ggcgaccgtt ccgatgcaat agaacgtgtc gctgacattg gtgacccagt
     1561 cgcgcagcgc ctcgttcatg gcgtccttga gcgtgcgcgc gcccgattct accgggcgca
     1621 cttcggcgcc gagaattctc attcttagaa cattcggctt ttgccgttcg acgtcgacgg
     1681 cccccatata cacgatgcaa ggcaatccga acttcgcgca aagcgtcgct gtcgcgacgc
     1741 catgcatgcc ggcgccggtc tcggcaatga tgcgcgtttt gcccatgcgc aaagccagca
     1801 tgatctggcc cagcacattg ttcaccttgt gcgcgccggt atggttcaga tcttcccgct
     1861 tgaagtaaat ctttgcgccg ccgcaatgct cggtgaaacg ttgggcgaaa taaagcggcg
     1921 atggacgtcc gacataggtc gcgagatggt ggttcatctc tttctggaag ctggggtcgg
     1981 tcttggcctt cgtgtaagcc ttttcgagct cgagaatgag cggcatgagc gtctcggcga
     2041 caaaacggcc gccatagatg ccgaattgcc cgcgctcgtc gggaccggtc cggaaagaat
     2101 ttggctgctg cacggtcatt cgggcccgcc tttatttgac tgaccggact atcgaagact
     2161 ctccaagctg aagaggcgcg gaaaaatgct ccgcctcggc tacgcgggcc gcccggataa
     2221 acgctcgaat cttgtcagga tccttttcgc ccgggctccg ctctacgcca gaggatacat
     2281 cgacacccgg tgcgcgcgtt atccggagag cctccaatac gttgtcggca tccagcccgc
     2341 cggaca
//
LOCUS       DATDHO010000293         4074 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_162603, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000293 DATDHO010000000
VERSION     DATDHO010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4074)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4074)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4074
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162603"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..677
                     /locus_tag="VIY07_05580"
     CDS             <1..677
                     /locus_tag="VIY07_05580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY6381257.1"
                     /translation="DAPANRIMLSFALPPLVIITLVALFSRAYANWAATGAISATILA
                     AAVLVQARAWRWLVFSIVLGLLVQVALLVGDAAAYRLAVPLLPSGKSDVYQRTLGFRA
                     LANEASQFVAATRAPTIAGEDRKTVAALLYYMRDQPLQILAWPSPDVPTFDMTRPLTK
                     EARQPIVFLTECASARRLAVHYANVEKIGEIHPTTGPTSSRHYTVFRLSGPKGEFAAL
                     PACTPD"
     gene            complement(691..2187)
                     /locus_tag="VIY07_05585"
     CDS             complement(691..2187)
                     /locus_tag="VIY07_05585"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEY6381258.1"
                     /translation="MTDALKLGFAPFGTPAKGVLLVFCDEGLKFGPATRRALGEAAGV
                     VQRAAKAERFTGKQNSALDLPVPAGLKVARLVVIGVGKTADLKPTDFLKLGGVAFGKL
                     PNAASDATVFAELPGVKSTQVADLAQGMRLRAYSFDRYKTKRKDDEKLPVTRHVTVAV
                     GDVAAARKAYDPRLAVSDGVLLARDLVNEPANVLYPEEFARRAGALKKLRVSVEVLDT
                     KAIKKLGMNALLGVGQGSAHESRVVVMRWNGGKAGEPPAAFIGKGVCFDTGGISIKPA
                     ASMEDMKGDMAGAACVVGLMHALAARKARINAVGVIGLVENMPDGNAQRPGDIVKSMS
                     GQTVEIINTDAEGRLVLADVIWYAAQRFKPKFIVDLATLTGAIIVALGQEYAGMFSNN
                     DQLAERLTKSGIETGELVWRMPLKAEYDKMIDSKFADMKNTGGSRWAGAITAAQFIKR
                     FVDDKTPWAHLDIAGTGFDSRQTDINKSWGSGWGVRLLDRLVADYYER"
     gene            2552..3721
                     /gene="lptF"
                     /locus_tag="VIY07_05590"
     CDS             2552..3721
                     /gene="lptF"
                     /locus_tag="VIY07_05590"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEY6381259.1"
                     /translation="MLRMGSIGRYIFRTTLGAFLIVLISLTAVIWVTQALRDIDIMTS
                     QGQSILVFVGITSLLIPMLILLIAPIALLIAVAHVLNKMSNDSEVIVMNAAGMSPWVL
                     FRPFMAAAIVVSLLVAAISAYFAPKGLRMLRDWVTEVRANVVSTIVQPGRFRAIEAGV
                     TIHIRERRPNGQLAGIFLDDRRNPNERITVLAEIGELVDNPSGTYLVLQKGNVQRYEA
                     GQRDPAMVAFDRYAFDLSQFAGGGQAVKYSIRERFLWQLLFPDSKDQSYIDQPDQFRA
                     ELSDRLMAPLYPIAFVVIAYAYLGAPRTTRQSRTLSMVGAVGGVALLRFIGFVSTVIG
                     ASVPWMLALQYLAVAAAIGGGLYVIRRGLILEPPTFITDWLAMLTERLSQRLAPS"
     gene            3731..>4074
                     /locus_tag="VIY07_05595"
     CDS             3731..>4074
                     /locus_tag="VIY07_05595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEY6381260.1"
                     /translation="MPIFLGTLARYFGLRFLIAVLIVFAGIFALVALIDYVEMMRRAG
                     DIANAPVALIAKTSIYRVPQVVERILPFCVLIGAMSCYLNLSRRLELVVARSAGLSAW
                     QFVAPALLVAFVL"
BASE COUNT          761 a         1249 c         1145 g          919 t
ORIGIN      
        1 aagacgctcc cgcaaacagg atcatgctct cgttcgcatt gccgccgctg gtcatcatca
       61 cgcttgtcgc gctgttctcc cgtgcctacg ccaactgggc ggcaaccggg gcaatttcgg
      121 cgacaattct cgcggccgca gtgctcgtac aggccagagc ctggcggtgg ttggtttttt
      181 cgatcgtgct cggcctcctc gtgcaagtag cgctcttggt cggcgatgca gcagcctatc
      241 ggctcgctgt accgcttctg ccatctggca aatcagatgt ttatcagcga acgcttgggt
      301 ttagagcgct cgcgaacgaa gccagccagt ttgtcgcagc tacacgggca ccgactattg
      361 ccggcgagga ccgcaagacg gtggcagctt tgctctacta catgcgcgac cagccattgc
      421 agattttggc ctggccttca cctgatgttc cgacgttcga tatgactagg ccactcacaa
      481 aggaagcgcg gcaaccgatc gtcttcctga ctgaatgcgc atcagccagg cgtctcgccg
      541 ttcactatgc aaacgtagag aaaatcgggg aaattcatcc aactacagga ccgacttcaa
      601 gcagacatta cacagtcttt cgactgagcg gcccgaaagg cgaatttgct gcgctgccgg
      661 catgcacgcc ggactaggca aacgcatttt tcacctctcg taataatccg ccactagccg
      721 gtccagcagc cgcacgcccc accctgagcc ccagctcttg ttgatgtcgg tctggcgcga
      781 gtcaaaaccg gtcccggcaa tatcgagatg cgcccagggc gtcttgtcat caacgaagcg
      841 cttgatgaac tgcgccgcag tgatcgctcc cgcccacctg ctgccgcctg tatttttcat
      901 gtcggcgaat ttcgaatcga tcattttgtc gtactcggcc ttgagtggca tccgccaaac
      961 caattcgccg gtttcaattc cggatttcgt caggcgttcg gcgagttgat cattgtttga
     1021 gaacatgccc gcatattcct gaccgagcgc gacgatgatg gcgccggtca gagtggcgag
     1081 atccacgata aatttgggct taaagcgctg cgcggcgtac caaatcacat cggcgagaac
     1141 gagcctgcct tcggcgtcgg tattgatgat ttcgacggtc tgtccagaca tcgacttcac
     1201 gatatcgccg ggccgctgcg cattgccgtc gggcatattt tcgaccaggc cgataacacc
     1261 caccgcattg atgcgcgcct tgcgggcggc aagcgcatgc atcaagccca cgacgcaggc
     1321 ggcaccggcc atgtcgcctt tcatgtcctc catgctggcg gccggcttta tcgaaatccc
     1381 gcctgtatcg aagcacacgc ctttgccgat gaatgcagcc ggcggttccc ctgcctttcc
     1441 gccgttccat cgcataacca ccacgcgact ctcgtgtgcc gaaccttggc cgacgccaag
     1501 caatgcattc atgccaagct tcttgatcgc cttcgtgtcg aggacttcta ctgaaacccg
     1561 gagtttcttt aacgcgcccg cacggcgcgc aaattcttcc gggtagagaa cgttggccgg
     1621 ctcgttgacg agatcgcgcg cgagcagcac gccgtcggaa acggccaaac gtggatcgta
     1681 ggctttgcgc gcagccgcca catcgccgac tgcgactgtg acatgccgcg taacgggcag
     1741 cttctcgtcg tccttgcgtt tggttttgta acgatcaaac gagtaagcgc gcagacgcat
     1801 gccctgcgcc aggtcggcga cctgcgtcga tttcacgcct ggcaattcgg cgaacacagt
     1861 cgcgtcactc gcagcgttcg gtaatttgcc gaaggcaact ccgcccaatt tgagaaaatc
     1921 ggtgggcttg aggtccgccg tcttgccgac acctatcacg acaaggcggg ccaccttgag
     1981 acctgcggga accggaaggt cgagcgccga attctgtttg ccggtaaacc gctccgcctt
     2041 cgcggcccgc tgcacaactc cggcagcctc gcctaaagcc cttcgcgtgg ccgggccgaa
     2101 cttcaacccc tcgtcgcaga acacgagaag gacgcctttt gcgggagtgc caaatggcgc
     2161 aaagccgagc ttcaaggcgt cggtcatcga ggtcctcttt cggctgatcc tagaaaatca
     2221 cggcccctta tggcccggcc ttggcaccac tgcaaaggcc acaactgacc ggaatcccgg
     2281 caatttttcg aactcccccg tacattggcc cagggacggg tcgtttgtag gtggccttcg
     2341 aatccggacg atgcccacag gcccgaaagt ccatcggcta aaaggccaca catttacatt
     2401 ttgatgtgca tgttcaacgg ctttgccttt gcccggccac tttgtggagc gatcaaaggt
     2461 gcgtctgacg ggggttgagt tctaagctga aatcggtcgc gttcggttag gaaccgaacg
     2521 cgcggtccgg tttgtgccgg atcaggggac gatgctgcgg atggggtcga tcggccgata
     2581 tatttttcgc accactttgg gtgcgttcct gatcgtattg atcagtctga ccgcggtcat
     2641 ctgggtcacc caggcgctcc gcgacatcga catcatgacg agccaaggcc aatcgattct
     2701 ggtcttcgtc ggtatcacca gccttctcat tccgatgctc atcctcctga tcgcgccgat
     2761 tgcgctgctg atcgcggtcg cgcacgtgct caacaagatg tcgaatgact ccgaagtaat
     2821 cgtgatgaat gcggcgggca tgtcgccgtg ggtcctgttc cggccattca tggcggctgc
     2881 gatcgttgtc tcactgctcg tcgccgcgat aagcgcctat ttcgcgccga agggtttgcg
     2941 gatgctgcgc gattgggtga cggaggtgcg cgcgaatgtc gtcagcacca tcgttcagcc
     3001 tggccgcttc agagccatcg aagccggcgt aaccatccac attcgcgagc gccgcccaaa
     3061 cggacagctt gctggcatct ttctcgacga ccggcggaac cccaatgagc gcattaccgt
     3121 gctcgcagag attggtgaac tggtggacaa ccccagtggc acctacctcg tactacagaa
     3181 agggaatgtg cagcggtacg aggcgggcca gcgcgatccc gccatggtgg cgttcgatcg
     3241 ctatgcattc gatctctcgc aattcgccgg cgggggacaa gctgtaaagt attcgatccg
     3301 ggagcgattt ctctggcagc tgctgtttcc ggattcgaag gatcaatcct acatcgacca
     3361 gcccgaccag tttcgagccg aactctccga ccggttgatg gcaccgcttt atccaattgc
     3421 ctttgtcgtg atcgcctacg cctatctcgg ggctccacgc actactcgtc aaagtcggac
     3481 gctctcgatg gtgggcgccg tcggtggcgt cgccttgttg cgcttcatag gtttcgtatc
     3541 caccgtgatc ggcgcttccg tcccctggat gctggcgctg caatacctcg ccgtggctgc
     3601 tgcaatcggc gggggcctgt acgtcattcg ccgcggcctg atattggagc cgcccacctt
     3661 cattaccgac tggctcgcaa tgctgactga gcgcctgagt cagcgtttgg caccttcgtg
     3721 atgtgacatc atgccgatct ttcttggaac actggcgcga tatttcggac tgcgttttct
     3781 aatcgcggtg ctgatagtat ttgccggaat attcgcactg gtcgcattga tcgattacgt
     3841 cgaaatgatg cgtcgggccg gcgatattgc caacgcgccg gtggcactca tcgcgaaaac
     3901 gtcgatttat cgcgtgccgc aagtagtcga acgcatcctc ccgttctgcg tccttatcgg
     3961 tgcgatgtct tgttacctca acttgtcgcg gcgactggag ttggtcgtcg cccgctctgc
     4021 cggtttgtcg gcttggcaat tcgtcgcgcc ggcgcttctg gtggcatttg tcct
//
LOCUS       DATDHO010000294         5312 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_113294, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000294 DATDHO010000000
VERSION     DATDHO010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5312
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_113294"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(136..432)
                     /locus_tag="VIY07_05600"
     CDS             complement(136..432)
                     /locus_tag="VIY07_05600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381261.1"
                     /translation="MSASHASASHEVHVVQNYADLSVDPDDEDCPHATPGEQHHQDND
                     LCKRCCSACLGATLIPAAPVATLLLSGPRDVLFTPEDALVARAVPTEPGIPKPL"
     gene            complement(615..1193)
                     /locus_tag="VIY07_05605"
     CDS             complement(615..1193)
                     /locus_tag="VIY07_05605"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY6381262.1"
                     /translation="MFRAIQFVLFVAFMLAGGAANAADESAAWDALRADGYVALIRHA
                     SAPGPAGDPANYKLDDCATQRNLSEQGRADARALGERFRTQRVKVGKIVSSEWCRCKQ
                     TAELMNIGQVEVAPTFNNAFVLNAMRDTLTAGARATISAWRGPGTMVVVTHGQNIMAM
                     LSIHPREGEVIVVAPDPASDNKMKLIGRIGSF"
     gene            complement(2100..3650)
                     /locus_tag="VIY07_05610"
     CDS             complement(2100..3650)
                     /locus_tag="VIY07_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018495120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEY6381263.1"
                     /translation="MVAATEHHPSEAVTAAVWTGFAMMCIGMFMAILDVQVVATSLAT
                     IQQALDIAQDQMSWIQTAYLIAEIISIPLTGFLTRLLTMRWLFVVAVSVFTLASIACA
                     ASTSFSSLIIFRVLQGFSGGTLIPLVFSAVFLLFPVRLQTLATMIAGVLAVLAPTVGP
                     VVGGWITETFSWHWLFLINVLPGAVAALAASVTLPNGQTSFDEARHLDVISLALGAVA
                     LAALEIAIKEAPKQGWTSPVSAGLLCLCLITAAAFAARTLRAARPLVNLRTFRDRNFA
                     IGCLLSFVLGIGLFGSIYLMPVFLAYVRSHNALEIGKIMLVTGVAQLIVAPLAALLVR
                     RIDERLLTAFGFLLFGIGLAMSSVQTKATDFDEMFWPQLVRGSAIMFCILPPTQLALG
                     HLAKAAIDDASGLFNLMRNLGGAIGIAVIDTVIYTRGPEHAQKIVNRLTAGDMDTVRS
                     LDIPPDVLAAAMLDPGKHAMLAPYIDKVAFVDAINEAWALVALLTIAALVALPFARRA
                     PKAAAIDR"
     gene            complement(3812..4066)
                     /locus_tag="VIY07_05615"
     CDS             complement(3812..4066)
                     /locus_tag="VIY07_05615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381264.1"
                     /translation="MRTILITAAALTVIAMPAFAQSFDPDVGTGNILPFVSNQGGASA
                     YARVPDYDARYSRAQTVRRMHQPAHRAHGKKIIHREDGNE"
     gene            complement(4290..4487)
                     /locus_tag="VIY07_05620"
     CDS             complement(4290..4487)
                     /locus_tag="VIY07_05620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381265.1"
                     /translation="MTQREEYLLRAAELSARAQAESDAARKVEFENMARAYLRLAEQA
                     KRNSLTDIVYETPPKKDSDQA"
     gene            complement(4687..4896)
                     /locus_tag="VIY07_05625"
     CDS             complement(4687..4896)
                     /locus_tag="VIY07_05625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381266.1"
                     /translation="MARPENRSEARALSLTLPIETFNYLVLLATLGKLGRTENEVATH
                     ILVREAYAMFERGFHEERIPAADVE"
     gene            5128..>5312
                     /locus_tag="VIY07_05630"
     CDS             5128..>5312
                     /locus_tag="VIY07_05630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381267.1"
                     /translation="MAGSQSDRGMRLGVHGNACRAAPIFAVGLGPASRFNASCAFVRP
                     RPARRPSLAAATGHEAN"
BASE COUNT         1147 a         1542 c         1590 g         1033 t
ORIGIN      
        1 cctgtagacg ggcagaccca acagagcgca acgagactca tggcggcaag gaagccgcgc
       61 aaaatggaat gcgtaagcat ggaagcccct catcgaaagg accttgggcc gcaatgcggc
      121 aatgaatgcg tccgatcaga gaggcttggg tattccgggt tcggtcggca cggcacgcgc
      181 gacaagcgcg tcttcgggcg taaacaggac gtcgcgaggt cctgagagca agagagtggc
      241 gacaggtgca gccggtatca gagtggcgcc aaggcaggcc gagcagcacc tcttgcagag
      301 atcgttatcc tgatgatgct gctctccggg cgtggcgtgg gggcagtctt cgtcatcagg
      361 gtcgacagac aaatcggcgt agttctgcac aacgtgaact tcgtgtgacg cgcttgcatg
      421 agacgcagac atccgggcgt gcgacaaaac aggtgtactt gcggctaatg agaccgctag
      481 gagcagcgcc agaagtttct tcaaggcgtg ccgcattgtc cgtccccgga tcggcatcct
      541 agctggctgt ctctggcacg caacaggaat gagacgctgg tctgaatacc tggctttgac
      601 cggatgccca gcgcttagaa cgacccaatc cggccgataa gtttcatctt attatcgctg
      661 gccggatccg gcgccaccac aatgacttct ccttcccgcg ggtggatgct gagcattgcc
      721 ataatgtttt ggccgtgggt gaccaccacc atcgtgcccg gcccacgcca cgcgctgatt
      781 gtcgcacgcg caccagcggt cagtgtgtcg cgcatggcgt tcaatacgaa ggcattgttg
      841 aacgtgggtg caacttcaac ctgaccgata ttcattaact cggcggtctg cttgcagcgg
      901 caccactcgg agctgacaat cttgccgacc tttacccgct gcgtgcgaaa gcgttcgccg
      961 agagcgcgcg cgtccgcgcg gccttgttca ctcaagttgc gttgggtcgc gcaatcatcg
     1021 agcttgtagt tggccgggtc gccggccgga cccggcgccg acgcatggcg gatcaacgca
     1081 acatagccgt cggcgcgcag cgcgtcccaa gcagcactct cgtcggcggc attggctgcg
     1141 ccacctgcaa gcataaacgc gacgaaaagc acgaactgga tcgcgcggaa catgggggca
     1201 ttctagccgc aatcgcgagg ggagtcgcag gttcaaattc tgccagtccg actattcgct
     1261 ttatcaaaag gttcaagcgt ttggtgaact tcctgaagct tcgcaagaag ttgaacgtga
     1321 cgcaccgaaa gcgggcgcat tccgcgtgac gcgaaaactc tcgttaacgc accttcacca
     1381 ccacgcgcga cctcgacacg atgtttggca cgtggtgcgc gtggacacat tgtaaaatgt
     1441 ggcgctgtcg caatcgccga accaactgcc cgagataagc ctgacaggct ggccggggac
     1501 ccagcgcaga caagcagggg cgacaccgtc gtaccgaaag ccattgatga caagccgccc
     1561 gctgtaaggc ggtgcaacaa gttcaacgac atggggggcg gccgagtagt agcggtgacg
     1621 atgccgcgtg gagcccggct cgtctgcaaa ggcggactga caaagcagca aagcaacgca
     1681 agtcactgaa gcgacgcgga cgatcatttt gattctccgg cgtgtgagcg aaataaagct
     1741 ccgtacgttc actcgttcgc gcaaatatcc attcgagcat atccgcttgg agccctccga
     1801 gtctggcctg aactaacatt gtctcaaagt ttcagttcca gcagacttga tatcgggccg
     1861 cctcccggac aaatagacca gcgccttgat gcaaaacctg cgctcgaaaa tctcaaagat
     1921 ttcaatggtt gaccggcggg tatgtaacct ccggccatcg gcttcgcgaa ccacttcaag
     1981 cgtttagcga acctcctgaa ccttcgcagg agcatgaagg aagaccaaca acgtgctgcg
     2041 ccagcttgtt cgagaagcca ggatcgcgtt gtcgggcctg ttgaaggaat aggttcattt
     2101 cagcgatcaa tcgccgccgc tttcggcgcc cgcctcgcga acggcagagc gacaagcgcc
     2161 gcgattgtca gcagggcaac gagagcccag gcctcgttga tggcatcgac gaaggccacc
     2221 ttgtcaatgt acggggccag catggcgtgc tttccggggt cgagcatcgc tgcggccaga
     2281 acgtccggcg gaatatcgag cgaccgcacg gtatccatat cgccggcggt gaggcggttg
     2341 acgatcttct gcgcatgttc ggggccgcgc gtgtagatga cggtgtcgat cactgcaatt
     2401 ccgatggcgc cgccgagatt gcgcataagg ttgaacaatc cgctcgcatc gtcgatggcg
     2461 gcctttgcca aatgtccgag ggcgagctgc gtagggggca gaatacaaaa catgatggca
     2521 gagccgcgca ccagctgggg ccagaacatt tcgtcaaaat ctgtggcctt cgtttgaacg
     2581 gagctcatcg cgagtcctat tccaaacagc aggaagccaa acgcggtcaa aagccgttcg
     2641 tcgatgcgcc gcaccagcaa ggccgcaagc ggggcaacga ttagctgcgc cacgcccgtc
     2701 accagcatga tcttgccgat ttcgagcgcg ttgtgagatc tcacgtaagc cagaaagacg
     2761 ggcatcagat agatcgatcc gaagaggcct atgccgagaa caaagctgag cagacaacca
     2821 atcgcaaaat ttcggtcgcg aaaggtgcgc aggttcacca acggtctcgc cgcgcgcagg
     2881 gtccgggctg caaatgctgc cgcggtgatc aggcacaagc agagaaggcc cgcggacacc
     2941 ggtgaagtcc atccctgctt gggcgcctcc ttgatggcga tttccagggc ggcgagggcg
     3001 accgccccaa gcgccagtga gatcacgtcc agatggcgcg cttcatcaaa agaagtctgt
     3061 ccgttcggca gcgttaccga cgctgccagg gcagcaaccg cgccaggcaa aacattgatc
     3121 aggaaaagcc agtgccatga aaacgtctcg gtgatccagc ctccgacgac cggcccgacg
     3181 gtcggagcga gaacggccag cacgccggcg atcatggtcg cgagcgtctg aagccggacc
     3241 ggaaaaagca ggaaaacggc agagaaaacg agcgggatca gcgtgccgcc ggaaaatccc
     3301 tgcaagacgc gaaagatgat gagagacgaa aagctcgtac ttgcggcgca ggcgatcgac
     3361 gcgagcgtga acaccgacac ggcaacaaca aaaagccacc gcatcgtcag caagcgggtc
     3421 aggaacccgg tgagcggaat cgagatgatt tctgcgatca gatatgcggt ctgaatccag
     3481 ctcatctgat cctgggcgat atccagcgcc tgctggatgg tagccagcga cgttgccacg
     3541 acctgcacgt ccagaatcgc catgaacatg ccgatgcaca tcatggcgaa accagtccac
     3601 accgccgcgg ttacggcttc ggagggatga tgttcagttg cggcaaccat tcccgctttt
     3661 gcgcagatgt ccggcgcgag cgcaaggagg gtaggaaagt gcgttaatgc ggcgcggagc
     3721 tatggcaccc cgcgaaggct tgggtccgga tgtggccgtg aaaagaagaa ggccccgatt
     3781 ctattcgagg ccttctttgc cgcccggagc gctactcgtt gccatcctcg cgatggatga
     3841 ttttcttgcc gtgtgctctg tgtgccggct gatgcatccg gcgaacagtt tgcgcacggc
     3901 tgtatcgcgc gtcgtagtca ggcacccggg cgtacgcgct tgcaccaccc tggttgctga
     3961 cgaacgggag aatgttgccg gtgccgacat cgggatcgaa ggattgcgca aaggccggca
     4021 tcgcaatgac agtcagagca gccgcagtga tgagaatcgt tctcataagt cttccttttt
     4081 gatgttactg ggagcccgcc cgtcgcgttt tcctgtccgc cgtgcatcgc cctttttagt
     4141 tattgttgca ccgacgacag acgacgctcc aacacatgcg ccgatcgatc gttccattcg
     4201 cctatttgct aatgccggcg ggaactagaa catttccggc tgcaaccgtt tggaatgtga
     4261 aactgaaata tgctcgtacg cgatagcagc tatgcttgat cgctgtcttt ctttggcggc
     4321 gtctcgtaga cgatatcggt gaggctgttg cgtttcgctt gttcagccaa tcgcagatag
     4381 gcgcgcgcca tgttttcaaa ttcaactttt cgcgcggcat cactttcagc ctgagccctg
     4441 gcgctgagct cagccgccct caacagatac tcttcacgtt gggtcatccc ctccgaccct
     4501 gaactcccag cggtcccacc gctacaatgt gttttttgac atatcgttcc gctcgccgcg
     4561 gctgaaacgt aattctttgt ctcagtgcag gcactcaatt accttcaatc gtagaaatag
     4621 ttgtcgagtc ttctgctagg tcagagacac gacattctgc tgaaggtcag tcgcgcgaat
     4681 gcggcgctat tccacgtcgg cagccggaat tcgctcctcg tgaaagccgc gctcgaacat
     4741 cgcgtaggct tcgcggacga ggatgtgggt cgcgacttcg ttttcggtgc gcccaagctt
     4801 tccgagagtc gcaagaagta ccaggtaatt aaatgtttcg attgggagcg tcagactgag
     4861 tgctcgcgct tccgagcggt tttcgggtcg cgccatggga ctacacctca ccgattacaa
     4921 cgccgttatt atgccattat aacccttgct gtgcgaatcg aatcgtggaa cgcttgattc
     4981 ggcgacggtt ttcgcttcga caccaagcag acccgcgctt ttcgggccgg cagaaagccg
     5041 gtcggcgggg cacccctgaa gcggggcgtc tgactgcaga ccggtcgtcg ttcggtcgaa
     5101 ggcgcggacc ctgggatcga aatcagaatg gcgggctcgc agtccgatcg cgggatgcgg
     5161 ctcggtgtcc acggcaatgc gtgccgggcg gcaccgattt tcgcggtcgg ccttggcccg
     5221 gcatcccggt tcaacgcgtc ttgcgcgttc gtgcgacctc gtcctgcccg gcggcccagt
     5281 ctggctgcag caaccggtca cgaggccaac at
//
LOCUS       DATDHO010000295         2337 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_410441, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000295 DATDHO010000000
VERSION     DATDHO010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2337
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410441"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..558)
                     /locus_tag="VIY07_05635"
     CDS             complement(103..558)
                     /locus_tag="VIY07_05635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HEY6381268.1"
                     /translation="MPQFSTKRRVPHAATDMFDLVADVEKYPQFVPLCSAMKVKSRTE
                     KDGVTVLVADMTVAYKIIRETFTSRVTLDRPDLRIFVEYLSGPFKRMQNRWRFVPVGE
                     DACEIEFFIDYEFRSRTLAAVMGAVFDAAFRKFAVAFERRADEVYGRPA"
     gene            complement(565..1512)
                     /gene="lipA"
                     /locus_tag="VIY07_05640"
     CDS             complement(565..1512)
                     /gene="lipA"
                     /locus_tag="VIY07_05640"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEY6381269.1"
                     /translation="MPVVLDLVKSPRPRHPEKAHRPDSAVLPKPAWIRVKAPVSPGYF
                     ATQKIMRDNGLHTVCEEAGCPNIGECWEKRHATFMIMGDTCTRACTFCNVKTGLPVAL
                     DPDEPARVADATAKLGLAHIVVTSVDRDDLADGGAQHFADTIRAIRGRCSQTTIEVLT
                     PDFLRKDRALELVVAARPDVFNHNLETVPSLYLTVRPGARYFHSLRLLQQVKELDPAM
                     FTKSGIMVGLGEERNEVLQVMDDLRSANVDFLTIGQYLQPTRKHHEVKRFVPPDEFKA
                     LESIAYSKGFLMVAASPLTRSSHHAGEDFARLKAARAAR"
     gene            complement(1554..1796)
                     /locus_tag="VIY07_05645"
     CDS             complement(1554..1796)
                     /locus_tag="VIY07_05645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019966307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEY6381270.1"
                     /translation="MSVIAWIVIGLLAGWLATRIMGGRGGLMRNLAVGLVGAIVGGFL
                     FEKLRLEVVPDFWGNLITATVGAVVFLLIWRAIRGA"
     gene            1902..>2337
                     /locus_tag="VIY07_05650"
     CDS             1902..>2337
                     /locus_tag="VIY07_05650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381271.1"
                     /translation="MTRQPRRRSRANAHEHGPWPLLAVYIAAVFLSALLLFSVQPMFT
                     RMVLPRLGGSPSVWSVAMVFFQTMLLAGYAYAHVLTRLRQRYAPVVIHLGVLGASMLA
                     LPLAIAERWGNPPNTAAAPFWLLGLFAFSIGLPFFALTANNPL"
BASE COUNT          455 a          727 c          688 g          467 t
ORIGIN      
        1 aaccccaagg cagctctggc aattgagcag cttgagacgc tggtcgataa gtcttaggcc
       61 aaagctgaag gtcgacgttt ttctgccgcc gcgtaagcgc gtctatgccg ggcggccgta
      121 gacctcgtcg gcgcgccgct cgaacgcgac ggcaaatttc cggaacgctg cgtcgaacac
      181 cgctcccatg accgcggcga gcgtgcggct gcgaaattca tagtcgatga agaactcaat
      241 ctcgcaggcg tcctccccga ccggcacaaa acgccagcgg ttctgcatgc gcttgaacgg
      301 tccgctgaga tattcgacaa aaatcctcag atctggccga tcgagcgtga cgcggctcgt
      361 gaaggtttcg cgaataatct tgtaggccac cgtcatgtcg gcgaccagga cggtgacgcc
      421 gtctttctcg gttcggctct tcactttcat cgcgctgcag agaggcacaa attgcggata
      481 tttttcgaca tccgcgacca ggtcgaacat atcggtggcg gcgtgcggga cgcgacgctt
      541 ggtcgagaat tgcggcattg aggactatct agcggcgcgc gcagctttca gccgcgcgaa
      601 atcttcgccc gcgtgatgcg acgagcgcgt gaggggcgag gcggccacca tcagaaaacc
      661 cttgctgtag gcaatgctct cgagtgcctt gaactcgtca ggcggcacga agcgtttgac
      721 ttcgtggtgc ttgcgcgtgg gctgcagata ttgcccgatg gtcaggaagt cgacattggc
      781 cgagcgcaga tcatccatca cctgcagaac ttcgtttcgc tcctcgccaa gaccgaccat
      841 aatgcccgac ttggtgaaca tcgccggatc cagttccttc acctgctgga gaagccgcag
      901 ggagtggaaa tatcgcgcac cgggccgcac cgtcagatag agcgagggca ccgtctcgag
      961 attgtgattg aacacgtcag gccttgctgc gaccacgagc tcaagcgctc tgtccttgcg
     1021 caggaaatcc ggggtgagaa cctcgatggt cgtctgcgaa caacgcccgc ggatggcgcg
     1081 aatggtatcg gcgaaatgct gcgcgccacc gtctgccaga tcgtcccgat cgaccgaggt
     1141 cacgacaata tgcgccaggc ccaatttggc cgtcgcatcg gccacgcggg ccggctcatc
     1201 cggatcgagc gcgacaggaa gcccggtctt gacgttgcag aacgtgcaag cgcgcgtgca
     1261 ggtatccccc atgatcatga aggttgcgtg tctcttctcc cagcactcgc cgatgttggg
     1321 acagccggcc tcctcgcaca cggtgtgcag gccgttgtcc cgcatgattt tttgtgtcgc
     1381 gaaatagccc ggcgataccg gcgccttgac acgaatccag gcaggcttgg gcagaaccgc
     1441 ggaatccggc ctgtgtgcct tttcggggtg ccgtggacgt gggcttttca caaggtcaag
     1501 gacaaccggc atgacatcta cttacggccg ctgctccgtc ctcgcaaggc gggtcaggcg
     1561 ccccggatcg cccgccagat cagcaggaat acgaccgcgc caacggttgc tgtgatcaga
     1621 ttgccccaga aatccggcac aacctcgagc cttagttttt cgaacaggaa cccgccgacg
     1681 attgcaccca cgaggcccac cgcaagattg cgcatcaggc cgccccgacc acccataatg
     1741 cgggtggcga gccatccggc gagcaagcca atgacgatcc aggcgatgac gctcatatcc
     1801 ctctcccgaa ttaagatgca gcggcgagcc aaaatctata caaccagcag ccaaaagcga
     1861 gcgaacctgc gctggcttgt gtgccggttt ccagcacaac gatgacacga cagccacgac
     1921 gacgttcgag agcgaacgcc catgagcatg gcccttggcc tctcctcgcc gtctatatcg
     1981 ccgcggtgtt tctgagcgcg ctgctattgt tcagcgtgca gccgatgttc acccgcatgg
     2041 tgttgccgag attaggcggc tcaccatcgg tctggtcggt ggcgatggtt ttcttccaga
     2101 cgatgctcct tgccggctat gcctatgcgc atgttttgac acgcttgcgg cagcggtacg
     2161 caccggttgt catccatctc ggcgtgttgg gcgcatcgat gctggcactt cccctggcca
     2221 ttgccgagag atggggcaat ccgccgaaca ccgccgccgc tcctttctgg ttgcttgggc
     2281 tgttcgcgtt ttcaatcggc ctgccgtttt tcgcgctcac cgccaacaat ccgctct
//
LOCUS       DATDHO010000296         1759 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_360190, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000296 DATDHO010000000
VERSION     DATDHO010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1759)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1759)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1759
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360190"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1230)
                     /gene="sucA"
                     /locus_tag="VIY07_05655"
     CDS             complement(<1..1230)
                     /gene="sucA"
                     /locus_tag="VIY07_05655"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609293.1"
                     /note="SucA; E1 component of the oxoglutarate
                     dehydrogenase complex which catalyzes the formation of
                     succinyl-CoA from 2-oxoglutarate; SucA catalyzes the
                     reaction of 2-oxoglutarate with dihydrolipoamide
                     succinyltransferase-lipoate to form dihydrolipoamide
                     succinyltransferase-succinyldihydrolipoate and carbon
                     dioxide; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEY6381272.1"
                     /translation="MTRQDTNAIFANTSFLYGGNAAYIEDLHAKYEKDPASVDAEWRA
                     FFQSLKDEKPDVLKSAGGPSWKKPDWPPRPSGDLVAALDGQWAETEKKLADKIVATAR
                     AKGVELFSPDVMQATRDSIHALMLIRAYRIRGHFHAKLDPLGLEPEKNEEELDPRSYG
                     FTEADLDRKIFLDNVLGLEFATMREIVAILRRTYCQTLGVEFMHISNAAQKSWIQARI
                     EGRDKEITFTREGKRAILNKLVEVEGFEKFLDIKYTGTKRFGLDGAESLIPALEQIIK
                     RGGNLGVKEICIGMPHRGRLNVLTQVMGKPHRALFHEFKGGSATPDEIEGSGDVKYHL
                     GASSDREFDNNKVHLSLTANPSHLEIVDPVTLGKVRAKQDQHHAKPDERTMVMPLLIH
                     GDAAFAGQGVVAECFGLS"
     gene            complement(1466..>1759)
                     /locus_tag="VIY07_05660"
     CDS             complement(1466..>1759)
                     /locus_tag="VIY07_05660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381273.1"
                     /translation="FKAVNFLAANTLGLPLPAAFSIAENSYTGWFLGSGYEYRFDWLP
                     GLYWKTEYRFSSFNKHDNPFLINGVAQPNAFIHSEKFIQTVTSSLVWRFNWWR"
BASE COUNT          350 a          486 c          522 g          401 t
ORIGIN      
        1 ggataggccg aagcattccg cgaccacgcc ctgccccgca aatgccgcgt cgccgtggat
       61 caatagcggc atcaccatgg tgcgctcgtc gggcttcgca tggtgctggt cctgtttggc
      121 gcggaccttg cccagggtga ccggatcgac gatttccaga tgcgacgggt tcgcggtgag
      181 cgacaagtgg accttgttgt tgtcgaactc acgatcggat gacgcaccga ggtgatattt
      241 cacgtcgccg gacccttcga tttcgtccgg agttgccgag ccgcccttga attcgtgaaa
      301 cagcgcgcgg tgcggctttc ccatcacctg agtaaggacg ttgagccgac cacggtgcgg
      361 catgccgatg cagatctcct ttacgccgag attgcccccg cgcttgatga tctgctcaag
      421 ggcggggatc agcgattccg cgccatcgag gccaaatcgc ttggtgccgg tatatttgat
      481 gtcgagaaac ttctcgaagc cttccacttc caccagcttg ttcagaatcg cgcgcttgcc
      541 ttcgcgcgtg aatgtaatct ccttgtcgcg accctcgatg cgcgcctgga tccagctttt
      601 ctgcgccgcg tttgagatgt gcatgaattc aacgccaagc gtctggcagt aggtgcggcg
      661 caggatggcg acgatctccc gcatggtcgc gaattcgagg ccaagcacgt tgtcgagaaa
      721 aatcttgcgg tcgagatcgg cctcggtaaa tccgtacgag cgcggatcga gctcttcctc
      781 gtttttctcc ggctcgagac cgagcggatc gagcttggca tggaagtggc cgcggatgcg
      841 gtaggcgcgg atgagcatca acgcatggat cgaatcgcgc gtcgcctgca tcacgtcggg
      901 ggagaaaagc tcgacgccct tcgcccgcgc ggtggcgacg attttatcgg ccagtttctt
      961 ttcggtctcg gcccactggc cgtcgagcgc cgcaaccaga tcgccgcttg gacgcggcgg
     1021 ccagtccggt ttcttccagg acggcccccc ggcgcttttc agaacatccg gtttctcgtc
     1081 cttcaggctc tgaaaaaagg cgcgccactc ggcatcgacc gacgccgggt ctttctcgta
     1141 tttggcgtgg aggtcttcga tgtaggccgc attgcccccg taaaggaagg atgtattggc
     1201 gaaaatggcg ttggtgtcct ggcgcgtcat ggtggtttct caaatccttg cgcggaggga
     1261 gatgcgttta cccgaaaaaa gggcaggcga cgcaatccct ttcttttacc tctatttatg
     1321 acgtgtgtaa gtcggcaaaa ggggtacgtt tgaaccgaga ttcaatgctt gcggtattag
     1381 caggctcttt atcggtgccg cgaaatcgca aaaagagagg gcctcggaaa tgccgaggcc
     1441 ctctaattac gttcgcagtg tcagatcagc gccaccagtt gaagcgccag accagcgaag
     1501 aggtgaccgt ctggatgaat ttctcggagt ggataaatgc gttgggctgc gcaacgccat
     1561 ttatgagaaa tggattgtca tgtttgttaa aactgctgaa ccggtactca gtcttccagt
     1621 agagtcctgg caaccagtcg aacctgtact cgtagccact gcccaggaac caacctgtat
     1681 aactgttttc tgctatagaa aaggcagctg gcaaaggtag tccgagggtg ttggccgcta
     1741 aaaaattcac ggctttgaa
//
LOCUS       DATDHO010000297         8042 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_162692, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000297 DATDHO010000000
VERSION     DATDHO010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8042)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8042)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8042
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162692"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..3578)
                     /locus_tag="VIY07_05665"
     CDS             complement(75..3578)
                     /locus_tag="VIY07_05665"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEY6381274.1"
                     /translation="MQTTLLGLAIAIILALVAALVGPMLIDWGNHRALFEAEASRLIG
                     VNVRVTGPISARLLPSPQLTLNEISIGEGRDRIRARSLGIEFGLGPLMRGEWRAAEMH
                     LIGPQVSLALDASGRVRAPNLAVAFKPDELSIDRLSIEGGTIVLTNEVNSATVALERV
                     WFTGEARSLAGPLKGEGGVIVAGQAYPYRVALGRLNDDGALKLRANVDPADHPLGFEA
                     DGTLTFVAAEPRFEGVLSVSRAVGIAQRNPGQSVQPLTQPWRASAKVKATGRSALMEN
                     IEFQYGSEDQGTKLSGVANFDFGARPRLSAVLSGRQIDLDRAVSGSGGSKQLVGDTVR
                     KLAELGASTLRTTLPVQLGVSIDLVTLGGNTIQNLRGDISNRGDGWDLDRLEFRAPGM
                     TQMRVSGHLAVSADSFRFNGPTELESSDVKALTAWLEGRSENQPGDLRPMSLSGEVAI
                     AADRIAVDGLKLEFNRRPLTGRFAYFVRSGDRPPRLEAQLSAQQFDFDAALDFGKALL
                     AGSAIERPGEISLVADVGRATFAGNEAGDLHARIKSDGNGLQFERLSVGDFAGGSFAL
                     SGRIETGGRAPRGMLSLDCEAKQTQVIAAAAAKLSPKTAAPFVSLIERAGRAKFRATL
                     DLSGDDKSATVAQLAMTGDLDDLRIDVRARARGDWAKPSAAEVRVEATVDSPRSASLL
                     KFMNLDGIVTAGNEPAQLKLQLAGPLSSDVRFDASLSGDGLSARATGSGRLAEDQGIK
                     VAANLQVREADVRPLRSIVGTAGGGAALPFKLTARLSGAGNAITIDDIDAKLAGSAIR
                     GRLAFGDVTPRRIDGMLELDAADIPALIARGIGLQPEPTAKGAAWSWSSDPFDSRLLG
                     KFAGQVRLKIKRADLLPQLAASDLSATLRLGKDELSLENVAGALAGGRLSGSITFHQA
                     TDGLTAQVQGSIAGANAAALLASATKPPISGAVELTADMIGTGLSPVALIGSLKGSGK
                     AVLINGRIANLDPRAFDVVTRAVDQGLIIDNGRISDLAAKSLEGGQLSLKRAESVLQI
                     AAGQVRLTSVSVDSKDTPLSAVSTLDLTDGSLAARVDLSGLHEAAGARPKIFVALNGP
                     LTAPTRSIDVSALTGWLTLRAVENQTKKLRAFENVPPQPQDRGMPKTKQAPALPAPID
                     IRPVPAPRSAGQPAPSVRSQN"
     gene            complement(3704..5125)
                     /locus_tag="VIY07_05670"
     CDS             complement(3704..5125)
                     /locus_tag="VIY07_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY6381275.1"
                     /translation="MVLAPIAAEQKTRNPAAIRKAVAELTAAFGNRVVTSQAVREQHG
                     NTVTWIVNQPPDAVVYPQSTEEVQQIVRICGANGVAVVPFGVGTSLEGHVNAPVGGIS
                     IDFRDMSRILAVHAEDLDCVIEPGITRKALNEQLRDSGLFFPIDPGADASLGGMAATR
                     CSGTNAVRYGTMKDNVVALKVVLANGEVIDTARRAKKTAAGYDLTRLMVGSEGTLGVI
                     TQLTLKLSGIPEAISGGTCPFPSVEACCTTTIQTIQSGIPVARIELLDALQVRACNMH
                     SNLGLPETPMLFLEFHGTEASVAEQSKRFGEIAAEFGGGPFTWTTRPEERSRLWEARH
                     HAALSNFALRPGAAMVPTDVCVPISRLAECVTETQRDIAESRILAPIVGHVGDGNFHL
                     TLLIDMDDDDEVKRAKALSERLVERALSMDGTCTGEHGVGQGKMKYMAAEYGTAALEV
                     MASIKRALDPQNIMNPGKIVALG"
     gene            complement(5252..5986)
                     /locus_tag="VIY07_05675"
     CDS             complement(5252..5986)
                     /locus_tag="VIY07_05675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HEY6381276.1"
                     /translation="MGKIIAVLYGIVAYLAFAITIVYAIGFVTGIGVPKTIDSGAVGE
                     PMGAISVNLLLMSLFAIQHSVMARPQFKKWWTRIVPVSVERSTFVLFSSLALMLLFWQ
                     WRPMPAVIWQVTNPQIAASLLGLSLIGWVLVFVSTFLINHFELFGLHQVANNLAGKPM
                     PAVRFKTPLLYNLVRHPIYLGFIIGFWATPAMTAGHLLFAAVTTAYIFVGIALEEHDL
                     VELFGDEYRRYRQRVSMIVPFLGRSS"
     gene            complement(6011..6271)
                     /locus_tag="VIY07_05680"
     CDS             complement(6011..6271)
                     /locus_tag="VIY07_05680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381277.1"
                     /translation="MHNDNVRLRENGTIDIDFYRREASILRRETTNRVLRRAARLGRP
                     LIRATTIVLTYALVAPRDPLPSGTDSIFVSADVPLIPTETKK"
     gene            complement(6273..6920)
                     /locus_tag="VIY07_05685"
     CDS             complement(6273..6920)
                     /locus_tag="VIY07_05685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3455 domain-containing protein"
                     /protein_id="HEY6381278.1"
                     /translation="MQIDSARRETDCHRQEALSLRAQTSTRFFRQLGRVARPLTGSVA
                     IIAAYIFALRLISLPAAAEVPSAIAAPGETLVVMAHAVGAQVYECKSDSAGKLAWQFR
                     EPIATLLIDGKTVGRHYAGPTWEMSDGSAVSAKVSSRAPGAAPGDIPLLKLEATAWNG
                     SGKLNGIATIQRLNTHGGSAEGACNSSGAFLSVPTAPTTLFSEKPANHIELANGE"
     gene            7074..>8042
                     /locus_tag="VIY07_05690"
     CDS             7074..>8042
                     /locus_tag="VIY07_05690"
                     /inference="COORDINATES: protein motif:HMM:NF012698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HEY6381279.1"
                     /translation="MLFLFNNFALDCERRELRAGGSAVPVEPQVFDLLVYLITNRDRV
                     VSKDDLIASVWGGRIVSDSTLDSRINAARKAVGDSGRKQNLIKTSARKGFRFVGEVQE
                     DAQTPAANGSNESRMPGVDPLPPLVSDRPSIAVLRFENLSEDRALELIANGLTEDIIA
                     QLARVPGFFVIARASSFAYSQRNADTRRVGAELGVRYLVTGSARSSADRVRVAVQLVE
                     AESGNQLWAGRYDVERSDTLDLQDEIARRIMVELEPALTKADLSVIHRRRIESVDAWS
                     HFRRAAGAIATQGWNESSVDEALSRSRQAIAIDPDFALARAFIALLN"
BASE COUNT         1541 a         2477 c         2431 g         1593 t
ORIGIN      
        1 actatcgggt ccacggcgag gagcgcatcc cgcaaagtga accccgcgag ttgcaaagct
       61 cgcgcgtggt ccactcagtt ctgcgagcgg actgagggcg caggctggcc cgcgcttcga
      121 ggcgcgggca ccggcctgat atcgatgggt gccggcagag caggcgcttg cttggtcttc
      181 ggcatccctc gatcttgagg ctggggcggc acattctcaa aggcacgcag cttcttcgtc
      241 tgattttcga ccgcgcgcaa cgtcagccat ccagttagcg ctgacacatc aatgctgcgc
      301 gtgggcgccg tcaatgggcc attcaacgcc acgaaaatct tcgggcgtgc accggcggct
      361 tcgtgcaagc cggacagatc gacgcgcgcc gcgagcgatc catcggtgag gtccagcgtg
      421 ctgaccgcgg aaagcggtgt atccttgctg tcgaccgaga cgctggtgag ccgaacctga
      481 ccggcagcaa tttgcaggac tgattcagcg cgcttcaagg acagttgccc cccttcaagt
      541 gatttggccg caaggtccga aatgcgcccg ttgtctatga taaggccctg atcaacggct
      601 cgtgtgacca catcgaaagc ccgcgggtcc aggttggcaa tccgcccatt gatcagcacg
      661 gccttgccgg agcctttcag cgagccaatg agcgccaccg ggctcagacc ggtcccaatc
      721 atgtcggcgg tcaactcaac cgctccgctg atgggtggct ttgtcgccga ggctaatagc
      781 gctgcggcat tggcgccggc aattgaaccc tggacttgtg cggtcaatcc atccgtcgcc
      841 tggtggaatg taatgcttcc ggacaaacga ccgcccgcca aagcgccggc aacattctcc
      901 aatgacaatt catctttgcc gaggcgcaac gtggcgctga ggtcgctggc cgcaagctgg
      961 ggcaacaagt ccgcacgctt gattttgagt ctcacctggc ccgcaaactt tccgagtaat
     1021 ctggagtcga acggatcgct ggaccaactc caggcggcgc ctttggcggt cggctccggc
     1081 tgcaagccga tcccgcgagc gatcagtgcc gggatgtccg cggcgtcaag ctcgagcatg
     1141 ccgtcgattc gccggggcgt gacatcgccg aacgcgaggc gaccgcgaat tgcagaaccg
     1201 gcgagcttcg cgtcgatatc atcgattgtg atcgcattgc ctgcaccgga caagcgcgca
     1261 gtcagcttga acggcaaagc ggcgccaccg ccagctgtgc cgacaatgga tcgcaggggt
     1321 cgcacatcag cttcgcgtac ctgcaaattc gcggcgacct tgatgccttg atcttcagca
     1381 agacgtccgc tgccggtcgc gcgcgcggat aagccatcgc cagacaagct cgcgtcaaac
     1441 ctgacgtcgc tgctgagcgg cccggctaac tggagtttca gctgagccgg ttcatttccg
     1501 gccgtcacga tgccgtcgag gttcatgaac ttgagtaacg acgcagaccg aggtgaatcg
     1561 accgtggcct cgacacggac ctccgcggcg gaaggtttgg cccaatcacc acgtgcccgc
     1621 gcccgcacat cgatgcgcaa atcgtcaaga tcgccggtca tcgccagttg cgcgacagtc
     1681 gcggacttgt catcaccgct caaatcgagc gtggcgcgga acttggcgcg gccggcccgt
     1741 tcgatgaggc tcacaaaggg agcggccgtc ttcgggctca atttcgccgc cgcagccgca
     1801 atgacttggg tctgcttcgc ctcgcaatcg agggaaagca tgccgcgtgg tgctcgcccg
     1861 cctgtttcga tccgtccgct tagcgcgaaa ctgccgccag caaaatcgcc gactgacagg
     1921 cgctcgaatt gcaagccatt gccgtcagat ttgatgcgcg catgcaaatc accggcctca
     1981 ttcccggcga aggtggcccg gccgacatcc gccacgaggc ttatctcgcc gggccgctcg
     2041 atcgcggatc ccgccagcaa ggctttgccg aaatcgaggg ccgcgtcgaa atcgaactgc
     2101 tgcgcgctca actgtgcttc gaggcgcgga ggccggtcgc ctgaacggac gaaatacgcg
     2161 aagcgtcctg tgagaggcct ccgattgaac tccagcttga ggccgtcgac cgcaatcctg
     2221 tcggcggcga tcgccacctc cccgcttaga ctcatcggcc gcaggtcgcc tggctgattt
     2281 tcgctacggc cttcgagcca cgccgtcagt gctttaacat ctgatgactc gagctcggta
     2341 ggcccgttaa atctgaacga gtcagctgag accgccagat ggccactgac gcgcatctgc
     2401 gtcatcccgg gggcgcggaa ttcgagtcgg tcgagatccc atccatcgcc gcggttgctg
     2461 atgtcgccac gcagattctg gatggtgttt ccgccgagcg taaccaaatc gatgctgaca
     2521 ccgagttgaa cgggcagcgt cgtgcgaagt gttgaggcac ccagttctgc cagtttgcgc
     2581 acggtatcgc caaccagttg cttcgatccg ccactaccgg aaaccgcacg gtcgagatca
     2641 atttggcggc cagacagaac tgcgctgaga cgcggacgcg ccccaaaatc aaaattggcg
     2701 actcccgata gcttggtccc ctgatcttca gaaccgtatt gaaactcgat gttctccatc
     2761 agtgccgagc ggccggtcgc cttgaccttt gcgcttgccc gccacggctg cgtcagcggc
     2821 tgaacgcttt ggccggggtt tcgctgcgca atgccaactg cacgcgatac actaagaact
     2881 ccttcaaaac gcggttcggc ggcaacaaag gtcaaggtgc cgtcagcttc aaagccgagc
     2941 gggtgatccg ccggatcgac attggcgcgc agcttgagcg cgccatcgtc attcagacgg
     3001 ccgagcgcaa cgcggtaagg ataggcttgg ccagcaacga tgacgccgcc ctcgcctttt
     3061 agtggaccgg caagcgagcg ggcttcgccg gtgaaccaaa cccgctcaag cgcgacggtc
     3121 gcactattga cctcgttggt gagcacgatc gtgccgccct cgatgcttag ccggtcgatc
     3181 gatagttcgt cgggcttgaa tgcgacggcg agatttggcg cgcgcacgcg gccggacgca
     3241 tccagagcaa ggctgacctg tggccctatc aggtgcattt cggcggcacg ccattcgcca
     3301 cgcatcagcg gaccgaggcc gaattcgatt ccaagcgacc gagcccggat tctgtcgcgc
     3361 ccttcgccga ttgagatctc atttaaggta agttgcggcg acggcagaag gcgcgcacta
     3421 attgggcctg tcacccgcac gttgacgccg atcagacggc tcgcctcggc ctcgaacagc
     3481 gcgcgatgat tgccccagtc gatcagcatt ggaccgacca gcgccgctac aagcgccagg
     3541 atgatcgcaa tcgccaatcc aagcagggtt gtttgcaaaa cagactccaa cgccgaatct
     3601 gagtccggcg ggggacctca gccagccgtg aatctaggct atattcgcaa attatggcgg
     3661 cgaatctgtg tcgcgccgct gccccgccaa ttcggcgcgt ggctcagccc agcgcgacga
     3721 tcttccccgg gttcattatg ttttgcgggt cgagcgcccg cttgatcgag gccatgactt
     3781 caagcgccgc ggttccatac tcggcggcca tgtacttcat cttgccctgt ccgaccccgt
     3841 gctcgccggt gcaggtcccg tccatcgaaa gcgcccgttc gaccagccgc tcagacagcg
     3901 ccttggcccg cttgacctcg tcgtcgtcat ccatatcgat cagcagggtc aggtggaagt
     3961 tgccgtcacc cacatgcccg acgatgggtg ccaggatacg gctttccgct atgtcgcgct
     4021 gcgtttcggt gacgcattcc gcgagccgcg atattggaac gcagacatct gtgggcacca
     4081 tggctgcgcc cggccgcagc gcgaaattcg acagtgctgc gtgatgacgc gcctcccata
     4141 gacgcgagcg ttcctcgggc cgcgtggtcc acgtaaaagg gccgccgccg aattccgccg
     4201 cgatctcgcc gaaacgcttt gactgctcgg cgaccgatgc ttccgtgccg tggaattcaa
     4261 gaaagagcat tggcgtctcc ggcagaccaa gattggaatg catattgcag gcgcgcacct
     4321 gcagcgcgtc gagcagctca atacgcgcca ccggtatgcc ggactgaatt gtttggatcg
     4381 tcgtggtgca gcatgcctcg accgaaggaa acggacaggt gccgccggag atcgcttccg
     4441 ggatccccga gagcttcaag gtcagttgcg taataactcc gagggtgccc tcggagccaa
     4501 ccatgaggcg agtcaggtcg taaccggcgg cggttttctt cgcacgccgc gcggtatcga
     4561 tcacttcccc gttcgcgagc accactttga gcgcgaccac gttatctttc atggtcccgt
     4621 agcgcacggc atttgttccg gagcagcgcg tcgctgccat cccgccaagt gaagcatcag
     4681 cgccgggatc gatcggaaag aaaagaccac tgtcgcgtag ctgttcgttg agcgcctttc
     4741 gcgtgattcc cggctcgata acgcagtcaa ggtcctcggc atgcacggca agaattctgc
     4801 tcatgtcgcg gaagtcgatc gatatgccac cgaccggggc gttcacgtgg ccttcgagcg
     4861 aggtcccgac cccaaacgga acaacggcga caccgtttgc cccgcagatg cgtacgatct
     4921 gctgcacttc ttcagtgctt tgcggataga cgacagcatc ggggggctga ttgacaatcc
     4981 aggtgacggt gttgccatgt tgctcgcgca ccgcttgcga ggtaacgacg cgattaccga
     5041 acgcggctgt cagctctgca accgcttttc ttatcgctgc aggatttctg gttttttgct
     5101 cggcagcgat cggcgccaat accattcggt tgtcctctgc tacgtccggc aaacgttagc
     5161 agaggacagg tttgggtgaa acgaggccgg cgccggcgga gttgcgggga caaccaccgt
     5221 gatcggctat gccgccaggc gccggccgcg tctacgacga tctcccgagg aacggaacga
     5281 tcatcgatac cctttgccgg tagcggcgat attcgtctcc gaatagctcg accaggtcat
     5341 gttcctcgag cgcaatcccg acgaagatgt aggccgtggt aactgcggca aacagcaggt
     5401 gcccggctgt catggccgga gtcgcccaaa acccgatgat gaatccgaga tagatggggt
     5461 gacgcacaag gttatagagc agcggcgtct tgaagcggac cgcaggcatc ggcttgccgg
     5521 cgagattgtt ggcaacctga tgcaggccga acaattcgaa gtggttaatc aaaaaggtgc
     5581 tgacaaagac caggacccag ccaatcaagc tcaggcccag gagcgaggca gcgatctgtg
     5641 gattcgtcac ctgccagatc actgccggca tcggccgcca ttgccagaac agcaacatga
     5701 gcgcgaggct tgagaaaagc acgaaggtgc tgcgttccac ggacaccggc acgatacgcg
     5761 tccaccactt cttgaactgg ggtctcgcca tgacgctgtg ctggattgcg aacagcgaca
     5821 tcagcagcag gttgacgctg attgccccca tcggctcccc gacagccccg gagtcgatcg
     5881 tcttcggcac cccgatcccg gtgacgaagc cgattgcgta gacaatcgta atcgcgaacg
     5941 cgagatacgc gacgatgccg tacaaaaccg cgatgatttt tcccatgaat cctctccttt
     6001 tttcttccga ttatttcttt gtctcggttg gaattagcgg cacatcggcc gacacgaata
     6061 tggagtccgt gcccgacggc aacggatcgc gtggcgccac caaagcgtag gtcaggacga
     6121 ttgtcgtggc cctgatgagc ggtcgcccga gtcgtgcggc acgccgtaag actctgttcg
     6181 ttgtttccct ccggagaatg gaggcttccc ggcgatagaa atcgatgtcg atggtgccgt
     6241 tctcgcgtag gcgaacattg tcgttgtgca ttttattctc cattcgccag ttcaatgtga
     6301 ttggccggct tttctgaaaa aagtgtagtc ggcgctgtag gaacgctgag gaatgcgccg
     6361 gacgagttac acgcgccttc ggcgctgcca ccgtgcgtgt tgagtctttg gatcgtggcg
     6421 atgccgttta gttttccgct gccattccag gcggtggcct caagcttgag gagcggaata
     6481 tcgcccggcg cagctcccgg cgcgcgcgat gagactttcg cgctgaccgc gctgccgtcg
     6541 ctcatttccc aggtcggacc tgcatagtgc cggccaaccg tttttccatc gatgagcaat
     6601 gtcgcgattg gctcgcgaaa ctgccacgcg agcttgccgg ccgaatccga tttgcactcg
     6661 taaacctgcg ctcccacggc gtgagccatt acaaccaaag tttccccagg cgcggcaatg
     6721 gcactgggca cctcggctgc cgccggaagc gagatcagtc tcagagcaaa aatgtatgcc
     6781 gcgattatcg cgacgcttcc cgtcagcgga cgcgcgacac ggcccagttg tctgaaaaac
     6841 cgggtactgg tctgggcgcg gaggctgagt gcttcctgtc gatggcaatc ggtctcgcgg
     6901 cgggcgctat cgatctgcat gcgcgactcc tttggattct tgcgcctgat caatgcgcct
     6961 tgtgcgagct aaaggctttg agtcccgctt gatttgtcct tgaggaagtc ttgatttcgc
     7021 tttagacggc cagccggtat gatttggcag cggtttcagt tgcggggcgc aacgtgctgt
     7081 ttttattcaa taatttcgcg cttgattgcg agcgccgcga gttgcgcgcg ggtggctcgg
     7141 ccgtacctgt tgagccacag gtgtttgatc ttctcgtcta tctgatcacg aaccgagacc
     7201 gtgtggtcag caaggatgac ctcattgcct ctgtgtgggg cggtcgcatc gtttcggact
     7261 cgacgctcga cagccgcatc aacgcggcgc gcaaggccgt gggcgacagc ggcagaaaac
     7321 agaaccttat aaaaacgtca gcgcgcaagg gcttccggtt cgtcggcgaa gtgcaggagg
     7381 acgcgcagac ccccgcagcc aatggctcca atgagtcccg gatgccgggc gtcgatccct
     7441 tgccgccgct tgtttccgac cgtccctcga tcgcagtgct gcgatttgaa aacctttccg
     7501 aggatcgcgc gctcgaattg atcgccaacg gactcaccga agacatcatt gcgcagcttg
     7561 cgcgtgtgcc gggatttttc gtcatcgccc gtgcgtcctc atttgcctat tcgcagcgga
     7621 atgctgacac gcggcgggtc ggcgccgaat taggagtgcg ttaccttgtc acaggcagcg
     7681 cgcgcagctc tgccgatcgc gtgcgcgtgg cagtccagct cgtcgaagcc gaaagcggca
     7741 accagctctg ggccggacgc tatgacgtgg agcgcagcga cacgctggat cttcaggacg
     7801 agatcgcgcg ccgcatcatg gtcgaactgg agccggcgct gaccaaggcg gatctttcgg
     7861 tgattcaccg gcggagaatc gagagtgttg atgcctggtc gcattttcgt cgggcggccg
     7921 gcgctatcgc aacgcaaggc tggaacgaga gctccgtcga tgaggcgttg agccggtcgc
     7981 gccaggcgat cgcgattgat ccggactttg ccttggcccg cgcgttcata gccttgctca
     8041 ac
//
LOCUS       DATDHO010000298         7233 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_410489, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000298 DATDHO010000000
VERSION     DATDHO010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7233)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7233)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7233
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410489"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(215..628)
                     /locus_tag="VIY07_05695"
     CDS             complement(215..628)
                     /locus_tag="VIY07_05695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin"
                     /protein_id="HEY6381280.1"
                     /translation="MPKFEMPKFEVPAAFREFAEKGVAQAKENYEKVKSAAEKATDVL
                     EDTYSTASKGCASYGLKVIETTRANSDAAFDLLTEVMTAKSYSEVVELYSAYLRRQFD
                     AFITQAKELSEHAQKVATETAEPIKVSIGTFNKAA"
     gene            complement(955..1332)
                     /gene="phaP"
                     /locus_tag="VIY07_05700"
     CDS             complement(955..1332)
                     /gene="phaP"
                     /locus_tag="VIY07_05700"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Members of this family are phasins (small proteins
                     associated with inclusions such as PHA granules). Note
                     that several different families of phasins have been named
                     PhaP despite very little sequence similarity to each
                     other; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01841 family phasin"
                     /protein_id="HEY6381281.1"
                     /translation="MAKEGTPRFEIPADMRALAEKNVEQAKQAFDIFIPAAQHAVSTA
                     ENQAATMQAGAKQVAELAMGFAERNITSSFEFAQRLLQAKDPKDIMALHADYVNSQIA
                     ALTEQGKELGERMAKMTGQGSKR"
     gene            1491..4364
                     /locus_tag="VIY07_05705"
     CDS             1491..4364
                     /locus_tag="VIY07_05705"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEY6381282.1"
                     /translation="MRALSADVSAAMTTEADMQLAYLRDPRLAAQALSPTPAWLWRED
                     AKQILWANPAGGSIFGAASPGMLAAMRFDSDHSAAAQVRRLSGTLPRAEASRLERLRG
                     FGAHTAAVLVCLCSRVTLADNSAAILVISTERAGRDLALPDRARCLLQDLDQPAAMFT
                     ADGELIEEQPAAQTLLGRRRDILALGAGKLAREASLNGSAEGRIGAGSIEILKLGAGR
                     TFALLVVFTKSIVCPCVSSREHITGIASSSKPNFPALAVHPHHFPFRFVWQTDADTHF
                     SVANQEFADLLGPNTAGVFGRSWPDIAQTLNVDPQGQISNAIGARETFSGIVLLWPVD
                     DVDERLPIEMSGLPVFDRDRQFKGFRGFGICRDLDRLQEIRQRRMLQPSAQTPPPTEA
                     PSKILPFHPTPEPRAEEPKLNPRERSAFQELARELSERLKRTSTAARTPVPDDFGSEP
                     AVPIAQPVREPMKIAADAQDTRPILDRLPVGILIYRLNTLMYANRAFLDWTGYHSLEA
                     LNEAGGLDSLFIESKPRTSGKKNAGKSLTIATVSGKQKPVEGRLFSATWNNDSALVLM
                     IDTRAGASDANEKSAEVSSPRTDEENRELRAILDTATDGVLVIDRTGRILSANRSAEA
                     LFGYSDLTDRSLGDLLAPESRGSAAEHLDRIAHSTGADVLDAGYEAIGRVRQGGLVPL
                     YITIGRIEGGEKLCAVLRDLTSWNLTAEELTRAKQAAEKASIAKSEFIAKISHEIRTP
                     LNAIIGFSEVMMSERFGPIGNERYRQYLKDIHASGGHLISLLNDLVDLSKIEAGKLEL
                     TFTSVNLNDLIQQCVAIIQHQANRERVIIRTALSAGLPQVIADARSMRQIALNLLSNS
                     ITFTGAGGQVIVSTTLTDEQEVVLRVRDTGSGISEKDLQTVLKPFGQTASAVRWTPGG
                     TGLGLPITKALVEANHACLRIASEVGDGTLVEIAFPSTRMLAQ"
     gene            4391..5167
                     /locus_tag="VIY07_05710"
     CDS             4391..5167
                     /locus_tag="VIY07_05710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HEY6381283.1"
                     /translation="MNRLFRRTSIMLVLALAAFGAWPARAAQPVDLLLVLAADVSRSI
                     DSQKFQLQREGYAAALANPRVLEAIRSGRQGRIGVLFLEWSGFGNQKVVIDWTMIDGQ
                     AAAQAFGDRLLESPRSYADRTSISGGIDAAVAQLARAPFEAGRRAIDVSGDGTNNSGR
                     DVTNARDEAVALGISINGLVILSETPLPWNPEHTNPPGGLPKYYRDNVIGGPGSFVLE
                     AKDFNSFGEAIVKKMIAEIAGVHPSDRHIHSNLNPLNLQP"
     gene            5258..7195
                     /locus_tag="VIY07_05715"
     CDS             5258..7195
                     /locus_tag="VIY07_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEY6381284.1"
                     /translation="MTTANGLKRLGFILLAVIAGGLAVLTTAGYLVSADAVRQQVLAE
                     IREVTGLEPVFRGKASVSLFPTGSVNFADVVLGDAKEPALSAERLTARLRFFPLLIGR
                     VEIADVALENPRIAIDFRPNGQSNWSALIEALTRSQTTAHRLTAFSEMRINGGTVVIR
                     DEARQLNETLYGVEFSLAWPSISKSFGATGRFVWHDAPMDASLTLADFAAALAGNRSG
                     LKLRVSGEPMKAAFEGAISLKPTLKIEGTLAADAASLRSALVWTGQKPLPGGGFGRFA
                     IKAKTNVVGGSISLSSVNVELDGNAAEGVLTFAGDGRKILQGTLAADALDLAPYVSTI
                     RLLTANERAWNNGRITLDGLAGLDIDLRLSAANVTVSTAKLGRTAVAANLRGGQLMIT
                     IGEAQAYNGVIKGSLALASSEHSVDVKSQLQFTDVDLESCLGQLFGLRRLEGKGNIQL
                     AVEGTGDSILAVTQTLSGTATLTGTNGALAGLNVEQLLRRLERRPLSGGGEFRSGRTP
                     YDKITVALKINQGTVTAEDVKVEGATVVLGLVGSASIPARELDFKGTAALVAPPKPGV
                     APFELPFIVQGSWDDPIMLPDPESLIRRSGAAAPLLNAVRDRSTRDSVRSAIERLTGG
                     GAASGTAAGQSSTQPAAGKPE"
BASE COUNT         1412 a         2220 c         2135 g         1466 t
ORIGIN      
        1 ttgaaccacc gacctctggt tccacagacc agcgctctaa ccaactgagc tacgcctgca
       61 cgatcggctt cgtcggacac tcgatccaag cggccggaac ctaggtgccg gccgccgttt
      121 tggcaagcgg cccggcgttt cttcgttcca aacgaaaacc cgggcatttc tgcccgggct
      181 tcgcaccact atctccaagc gccgacgcct ggcgtcaggc cgccttgttg aatgtgccga
      241 tgctgacctt gatcggctcg gcagtttcag tagccacctt ctgtgcatgc tcggacaatt
      301 ccttggcctg cgtgatgaag gcatcgaatt gcctgcgcag gtaggcgctg taaagttcaa
      361 ccacttcgga ataggacttc gccgtcatga cctcggtgag caggtcaaac gcagcgtcgc
      421 tgtttgcgcg cgtggtctcg atcactttga gcccgtagct cgcgcagccc ttggaagccg
      481 ttgaataggt gtcttcaagc acatcggtcg ccttctcggc cgcgctcttg accttctcgt
      541 aattctcttt ggcctgcgcg acgcccttct ccgcgaactc gcggaaggcc gccggaacct
      601 caaatttcgg catttcgaac ttgggcatct caaacttcgg catttctaaa gctggggcgc
      661 tcacggcgac cggctttggt ttggattttg aagccgaaga agtagtcgtt tcagccataa
      721 gaaagcatcc tttgatagcg agggcattcc agatcggacc gtccgccctc ggaaaatcgg
      781 ccctgtgaat ggaggtcgcc acgcaccgtg cttacgcctg gtgcgccgcg atcacttgac
      841 caatgcttat acattcattt ttgatgcatt gcaacaaaaa tattgcgatg cacaaaaaga
      901 cattccccgt cgcattgcgg gcgggttccg ccgcgttgcc gatcgttgaa cggttcagcg
      961 cttggagccc tgcccagtca tcttcgccat ccgttcgcca agttccttac cctgttccgt
     1021 aagagccgcg atctgggagt tcacgtagtc cgcatgcagc gccatgatgt ccttagggtc
     1081 tttggcctgt aaaaggcgtt gcgcaaattc gaacgaggac gtgatgtttc gctccgcgaa
     1141 ccccatcgcc agttcggcaa cttgcttggc gccggcttgc atagtggccg cctgattttc
     1201 cgccgtgctg acggcgtgct gcgccgctgg aatgaaaata tcgaaagcct gcttggcctg
     1261 ctcgacgttc ttttccgcca gtgcccgcat atcggccgga atttcgaacc gaggggttcc
     1321 ttctttcgcc atgacaccct cctgcatgtc ctaccggctg cccagccgta ggtctgaact
     1381 ctatctaggt ttgtgcgccg aacgtgccag tcacgggctg cattaacgtt atttgcgcat
     1441 gcaaccggct tgcgtttcgc gcgccgtgga cgccgcactt cggcggccct atgagggcct
     1501 tatcagccga cgtttccgcc gcgatgacga ccgaagccga catgcagcta gcctatcttc
     1561 gcgatccgcg cttggcggca caggctctta gtccgacgcc ggcttggctg tggcgcgaag
     1621 atgcaaagca aattctgtgg gccaatccag cgggtgggtc gattttcgga gctgcgtcgc
     1681 ccggcatgct tgcggcaatg cgcttcgact ccgatcattc cgcggcggca caggtcagac
     1741 gcctttcagg aacattgccg cgtgcggagg cgtcgcggct ggagcgcttg cgcggctttg
     1801 gcgcccacac cgcggctgtg ctggtatgtc tatgctcccg cgtcacgctg gccgataaca
     1861 gtgcagcgat actggtcatc tcaacggagc gtgctggccg cgaccttgcc ttgcctgatc
     1921 gggcacgctg tctgcttcag gatctcgacc aaccggcggc gatgtttact gctgacggcg
     1981 aactgatcga ggagcagccc gccgcacaaa cactgctcgg caggcggcgc gacattctgg
     2041 cgcttggcgc cggaaagctc gcccgcgagg caagcctcaa tggcagcgca gaaggcagga
     2101 ttggggcggg ctcgatcgag attcttaagc tcggagcagg ccggactttc gcgttgcttg
     2161 tcgtcttcac caaatctatc gtgtgtccct gcgtcagctc gcgcgagcac ataacgggaa
     2221 ttgcgtcttc atcaaaaccc aattttccgg cattggcagt gcacccgcac cattttccct
     2281 tccggtttgt ttggcagact gatgccgata cgcacttcag cgttgcaaat caggaattcg
     2341 ccgatctgct ggggccgaac acggcgggtg tttttggccg cagctggcct gatattgcgc
     2401 aaaccctgaa tgtcgatcca cagggacaaa tctcaaacgc gatcggagcg cgcgagacct
     2461 tcagcggtat cgttctcctg tggccggtgg atgatgtcga cgagcgcctg cccattgaaa
     2521 tgtccggctt gcccgtgttc gacagggacc ggcaattcaa gggtttccgc ggtttcggca
     2581 tttgccgcga tctggaccgg ttgcaggaga tacggcagcg ccgcatgctt cagccctctg
     2641 cgcagacgcc cccgccaacg gaggcgccat ccaaaatcct tcccttccat ccgacacccg
     2701 agccgcgtgc ggaggagcca aaactgaatc cgcgcgagcg aagcgcattt caggagctcg
     2761 ctcgcgagct cagcgaacgc ttgaagagaa cgtcaaccgc ggcccgcacg cctgtcccgg
     2821 acgatttcgg ctccgaaccg gctgtcccga tcgctcagcc tgttcgcgag ccgatgaaaa
     2881 tagccgccga cgctcaggac acgcggccaa ttctcgatcg tctgccagtc ggcatcctca
     2941 tctaccggct gaacaccctg atgtatgcca accgcgcctt ccttgactgg accggttatc
     3001 actccctgga agccctgaat gaggccggcg gcctcgacag tcttttcatc gaaagcaagc
     3061 ccagaacctc aggaaagaaa aatgccggca agtctctcac gattgccacg gtcagcggca
     3121 agcaaaagcc ggttgaggga cgtctgttca gcgcaacatg gaataacgac agcgcgctcg
     3181 tgctgatgat cgacacgcgc gcgggtgcga gcgatgcgaa cgaaaaatcg gcggaagttt
     3241 cctcgccccg gaccgacgaa gagaatcgcg agctcagggc aatcctggat accgccacgg
     3301 atggcgtgct ggtgattgac cgaaccggtc gcatactttc ggcgaatcgc agcgccgagg
     3361 ctttgttcgg gtattccgat ctgaccgacc gttcgctcgg cgatctgttg gcaccggaaa
     3421 gccgaggctc cgccgcggaa catctggacc ggatcgccca cagcacaggt gccgatgtcc
     3481 tcgatgccgg ttacgaagcg atcggacggg tccgccaggg cgggttggtt ccgctataca
     3541 tcaccatcgg tcgcatcgaa ggaggcgaaa agctttgcgc ggtgctgcgt gaccttacct
     3601 catggaacct taccgcggag gagttgacga gggcaaagca ggccgccgag aaggcttcga
     3661 tcgccaaatc tgagttcatc gcgaagatca gtcacgaaat tcgcacgccg ctgaatgcca
     3721 tcatcggctt ctccgaggta atgatgagcg agcgcttcgg cccgatcggc aacgagcgat
     3781 atcggcagta cctgaaggat attcatgcat ccggaggcca cctgatctcg ctcctcaacg
     3841 accttgtgga tctgtcgaaa attgaagccg gcaaacttga gctcaccttc acgagcgtca
     3901 atttgaacga tctgatccag caatgcgtcg cgatcatcca gcatcaggca aatcgcgaac
     3961 gtgtcatcat ccgtacggcg ctctccgccg gcctcccgca ggttatcgct gatgcgcgct
     4021 ccatgcgtca gatcgcccta aatctcttgt ccaattccat cacgtttaca ggcgccggag
     4081 gacaggtcat cgtctcaaca acgttgaccg acgagcagga ggtcgtgctc cgcgtacgcg
     4141 ataccggttc cgggataagc gagaaggact tgcagaccgt gcttaagcct ttcggacaga
     4201 ccgcttcagc ggtgcgttgg acgcctggtg gaaccggtct tggcctcccg attaccaaag
     4261 cgctggtcga ggccaatcac gcctgcttgc gcattgcgag cgaggtaggt gatggaacgc
     4321 tggtcgagat cgcattccca agcacacgga tgctggcgca gtaattccga aatcggctag
     4381 gctcctcgcc atgaaccgac tgtttcgccg cacatcgatc atgctggtgc ttgctctcgc
     4441 agcgttcggc gcttggccgg cgcgcgcggc gcagcccgtc gatcttcttc tggtactggc
     4501 ggccgacgtc tcgcgcagca tcgacagcca gaaattccag ctgcagcgcg aaggttatgc
     4561 cgcggctctc gccaatcctc gcgtcctcga agccatacgg tccggacggc agggtcgcat
     4621 cggtgtgttg tttctggagt ggtccggttt tggaaaccag aaggttgtaa tcgactggac
     4681 aatgatcgac ggccaggcgg ctgctcaggc attcggcgac cggctgcttg aatcgccacg
     4741 ctcttatgcc gatcgcacgt cgatcagcgg ggggatcgat gcagctgtgg cgcagcttgc
     4801 tcgtgctccc tttgaagccg gacgtcgcgc catcgacgta tcgggtgacg gcacaaacaa
     4861 ctccggccgc gacgtcacaa acgctcgcga tgaggcagtg gcattaggca tcagcatcaa
     4921 cgggctggtg atcctgagcg agaccccgct gccgtggaac cccgaacaca caaacccgcc
     4981 aggggggcta ccgaaatact atcgcgacaa tgtaatcggc gggcccggca gctttgtcct
     5041 tgaagccaag gacttcaatt cgttcggcga ggcgatcgtc aagaaaatga tcgcggaaat
     5101 cgcgggtgtt cacccatcag accgccatat acacagcaat cttaacccat tgaacctcca
     5161 gccttgaaag ggtcacagag cccggccaag gttggccgga gcgggaccga tgcttatagt
     5221 tcgtgggcat cgacggcgaa gacaaccgga acctccattg acaacggcca acggcttgaa
     5281 gcgcctggga tttatcctgc tcgcagtgat tgcgggcggc ttggccgtgc ttacgaccgc
     5341 tggttacctg gtatcggccg atgcggtacg gcaacaggtt ctggcagaga tccgcgaagt
     5401 caccggcctt gagccggttt ttcgcggcaa agccagcgtt tccctgtttc ccacaggcag
     5461 cgtcaacttt gccgacgttg tgcttggcga tgccaaagaa cctgctctga gcgcggagcg
     5521 tctgacggcg cgcctgcgct ttttcccgtt gctgatcggg cgcgtcgaga tcgcggatgt
     5581 cgctctggaa aatcccagaa ttgcgatcga cttccggccc aatggtcagt ccaattggtc
     5641 ggctctgatc gaagcactca cgcgcagcca gacgaccgcg catcggctta ctgcgttttc
     5701 cgaaatgcgg atcaacggcg gcacggtcgt gatccgggac gaggctcggc aactcaacga
     5761 aacattgtac ggggtggaat tctcgctggc ctggccgtca atctcaaaga gtttcggcgc
     5821 caccggccgc ttcgtctggc acgacgcgcc aatggatgcg agcttgacgc ttgccgattt
     5881 cgccgccgcg ctcgccggca accgcagcgg cttgaaactc cgcgtctcag gcgagccgat
     5941 gaaggctgcc ttcgaaggcg ctatcagtct gaaaccgacc ctgaaaatcg aaggtaccct
     6001 tgcggcagat gccgcttcgt tacgcagcgc attggtgtgg acgggacaaa agcctttacc
     6061 cgggggcggc ttcggccggt tcgccatcaa agcgaaaacc aatgtggttg gcggcagcat
     6121 cagtctgtcc agcgtcaatg tggagctcga cggcaatgcc gccgaaggcg tgcttacatt
     6181 cgccggcgat ggacgaaaga tcctgcaggg cacgcttgcc gccgacgcgc tcgacctggc
     6241 gccctatgtt tcgactatcc ggcttctcac cgcgaatgag cgcgcatgga acaatggccg
     6301 catcacgctt gatgggcttg cgggactcga tatcgacttg cgcctgtcgg ctgcaaacgt
     6361 caccgtctcc actgccaagc ttggacgcac cgccgttgcc gcaaacctgc gtggcggaca
     6421 gctgatgatc acaatcggag aggctcaggc ttataacgga gtcatcaaag gctctctcgc
     6481 gctcgccagt tccgaacaca gcgtcgacgt caaatcgcag ttgcagttta ccgatgtcga
     6541 ccttgaaagc tgcctcggcc aattgttcgg actgcgccgg ctcgaaggaa aagggaatat
     6601 ccagctcgcc gttgaaggta cgggcgacag catactggct gtgacgcaga cattaagcgg
     6661 cacagccaca ttgaccggga cgaacggtgc gctcgcgggg ctcaatgtcg aacagttgct
     6721 ccggagactg gaacggcgcc cactttccgg tggcggcgaa ttccgcagcg gacggacgcc
     6781 ctacgacaag atcaccgtcg ctttgaagat caaccagggt acggtcacgg ccgaagacgt
     6841 aaaggtcgag ggcgctacag ttgttctggg gctcgtgggc tcggcttcga ttccagcgcg
     6901 cgagcttgat tttaagggca ccgccgcgct tgtggcacct ccgaagccgg gtgtggcacc
     6961 cttcgagctg ccgttcatcg tgcaaggctc gtgggacgac ccgatcatgc tgcccgaccc
     7021 ggaatctctg atccggcgct cgggggcggc cgcgccgctc ctcaacgcgg tgcgcgatcg
     7081 cagcacgcgc gactccgtgc gatcggctat tgaacggttg acgggcggtg gcgcagcctc
     7141 cggcacggct gccggccagt cgtctacaca accggcggcg ggaaagccgg aataacagcg
     7201 actacacggt cggctcttca gcagcgactg atc
//
LOCUS       DATDHO010000299         3751 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_162710, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000299 DATDHO010000000
VERSION     DATDHO010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3751
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162710"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1221
                     /locus_tag="VIY07_05720"
     CDS             <1..1221
                     /locus_tag="VIY07_05720"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEY6381285.1"
                     /translation="LFDAKGSVVGVATGDMGVGRNGEPKDSFTRGMELRAKYTLLAEG
                     ARGNLAKQLIAKFGLANAREPQKFGLGLKELWQVAPEKHRKGLVQHTFGWPLDNSTGG
                     GSFLYHLDENLVSVGFVLHLNYANPYLSPFEEFQRLKTHPKIRDTFDGGKRVAYGARA
                     LTEGGYQSVPKLSFPGGVLIGCDAGFMNVPRIKGSHNAMLSGIMAAEAAAAALASGRS
                     HDELVDYDAGWRQSAIGQDLWKVRNAKPLWSKFGTLGGIMLGGLDMWTNTVGFSVFGT
                     LGHGKPDYATLKPASECTPVSYPRPDGKITFDRLSSVFLSNTNHEEDQPVHLLVADLA
                     LQKKSEHDVFAGPSARYCPAGVYEWVDEAGVPKFVINAQNCVHCKTCDIKDPNQNINW
                     VPPEGGGGPNYPNM"
     gene            1464..3131
                     /locus_tag="VIY07_05725"
     CDS             1464..3131
                     /locus_tag="VIY07_05725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6381286.1"
                     /translation="MDAQPSSALQSTNTSASGSYLAARHAGQQRDAAAAAAYYRAALK
                     RDPNNAELLDRAFLSFLVDGDVDEAVKFAERVAQADKNDRVARLVLGVNALKRKQYGT
                     AKRDLAQSIRGPITDLTASLLSAWSTFAANDSKGAIAAIDHLAGPDWYAIFKDLHAGL
                     IYDLAGNQKEAGKRLERAHKLDSTALRVVQAYGSWLSRNRSPKEALAIFEAFDKTLPR
                     HPLVMESMEKLKAGEKLPALVTNAQAGAAEALYGLGASLGRRGGEDLGLVYLQLSLFL
                     SPSHPLALLSLADLYEALKKPELAIKIYERVPPSSPLHRNAAIQMAANLDSLERADDA
                     QKHLEALIKQNPDDLEAIMALGNVLRGHKKFAECANVYSKGIATISKPEKANWIVFYF
                     RGICYERSKQWAKAEIDLKKALELFPDQPHVLNYLGYSWIDQGVKLDEGMEMIKKAVQ
                     QRPDDGYIVDSLGWAYYRLGNYEEATKQLERAIELKPEDPTINDHLGDAYWRVGRILE
                     AKFQWAHARDLKPDAEELPKIEEKLKSGLPDETSSQAKAVRKSGDGG"
     gene            3161..>3751
                     /locus_tag="VIY07_05730"
     CDS             3161..>3751
                     /locus_tag="VIY07_05730"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: protein motif:HMM:NF011202.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEY6381287.1"
                     /translation="MGVTLLEKAPAKINLTLRVLGRRADGYHELESLVAFADVADTLT
                     LEPDTKDTLEITGPFAADSGAIPDNLVLKALAAARICIGAVKAGRFSLEKNIPVAAGL
                     GGGSADAAATLRLIAGVNEIALDDARIMSAAQAVGADVPVCVASRPRIMRGVGELLSD
                     PVDLPPLAGVLVNPRIPLSTRDVFGKFVRAQGGNDLG"
BASE COUNT          762 a         1102 c         1146 g          741 t
ORIGIN      
        1 ctctttgacg caaaaggttc ggttgtgggc gttgcgacag gtgatatggg tgtcggcagg
       61 aatggcgagc ccaaggacag cttcacccgc ggcatggaat tgcgggctaa atacacgctg
      121 ttggcggaag gtgcgcgcgg caatctcgcc aaacagctga ttgcaaagtt tggtctggcg
      181 aacgctcgtg aaccacaaaa attcgggcta ggcctcaagg agctctggca ggtcgcgccg
      241 gaaaagcatc gcaagggtct ggtccagcac acattcggct ggccgctcga taattccacc
      301 ggtggcggct catttcttta tcaccttgac gaaaacctgg tgtcggtcgg gtttgtgctg
      361 cacctcaact atgccaatcc gtatctgtcg ccgtttgagg aattccagcg cttaaagacc
      421 catcccaaga ttcgagacac tttcgatggc ggcaagcgtg tcgcatatgg cgcgcgtgcc
      481 ttgaccgagg gcggttacca gtcggtgccg aagctttcgt ttcctggggg ggtgctgatc
      541 ggctgcgacg ccggatttat gaatgtgccg cgcatcaagg gcagccacaa cgcgatgctg
      601 tcgggaataa tggctgccga agcggccgct gccgcactcg cttccggccg cagccacgat
      661 gagcttgtgg attacgatgc gggctggcgt caatcggcca tcggtcagga cctatggaag
      721 gtccgtaacg caaagccgtt gtggtcgaaa ttcgggactc ttggggggat catgcttggc
      781 gggctcgaca tgtggacaaa cactgtcggt ttttcggtat tcggcacgct tggccacggc
      841 aagccggatt atgccaccct gaagcccgcc tcagaatgca cgccggtttc gtatccgagg
      901 cctgatggca aaattacctt cgaccggctt tcttccgttt ttctgtcaaa tacgaatcat
      961 gaggaagatc agccggttca cctcctcgtc gccgacctcg cattgcagaa aaaatccgag
     1021 catgacgtct tcgcaggccc ctcggcgcgt tattgccctg cgggtgtcta cgaatgggtc
     1081 gatgaagccg gcgtcccaaa gttcgtgatc aatgcccaaa actgcgttca ctgcaaaacc
     1141 tgtgacatca aggacccaaa ccagaatatt aattgggttc cccccgaagg cggcggaggg
     1201 ccaaactatc caaatatgtg atcagccggg cggaattcgg tcacgatccc gccacccgga
     1261 cgcgtcaagg tcgttccgct cgcactgcgc gacgttcttg cggttgcggc gcaaaaaggc
     1321 cattctcggc gtcacattcg gtggttcgcg cgcaagcgcg cgaccgccac ctcattggag
     1381 catcgcccgt gaccgttttg agcttcaggc gctgcactgc tagcagcgca ctggccgcct
     1441 ttctggcggt agcaccattt caaattgacg cgcagccatc cagcgccctg caatccacga
     1501 atacaagcgc atcgggcagc taccttgctg cgcggcatgc ggggcagcag cgggatgctg
     1561 ccgctgcggc cgcctattac cgggcggcgc tcaagcgcga tccaaacaac gccgaattgc
     1621 tcgatcgcgc cttcctgtcg tttctggtcg atggagacgt cgacgaagcg gtgaagtttg
     1681 ccgagcgcgt ggcgcaggcc gacaagaacg atcgcgtcgc ccgtctagtg ctcggtgtga
     1741 acgcgctcaa gcgcaagcaa tatggcaccg caaagcgcga tctggcgcaa tccatccgtg
     1801 gtccgatcac ggaccttacg gcatccctcc tgtccgcctg gagcaccttc gccgccaacg
     1861 acagcaaggg agcgatcgcg gcaattgatc acctggccgg gccggactgg tacgcgatct
     1921 tcaaggatct gcatgccggt ttgatctatg acctcgccgg gaaccagaaa gaggcgggca
     1981 agcgactcga gcgcgcccac aagctcgatt ccactgcgtt acgagtcgtg caggcttacg
     2041 gcagctggct ttcgcgcaat cgctccccga aggaagcgct ggccatattc gaggctttcg
     2101 acaagaccct gccgcgccac ccgctggtga tggaatcgat ggaaaagctc aaggcgggtg
     2161 aaaaactgcc ggcgcttgtc acgaatgctc aggcgggcgc tgctgaagcg ctctatggcc
     2221 tcggtgcgtc gctcggccgc cgtggtggcg aagatctggg cctcgtttac ctgcaactgt
     2281 ccctgtttct cagccccagc catccgcttg cgctgctctc gctcgccgat ctgtacgagg
     2341 ccctcaagaa gccggaactg gcaatcaaga tttacgagcg ggtgccgcca agttcgccgc
     2401 tgcatcgcaa cgccgccata cagatggcag ctaatctcga tagcctcgaa cgagcggacg
     2461 acgcgcagaa gcatctcgag gccctgatca agcaaaatcc ggatgatctg gaagccatca
     2521 tggcgttggg caacgtgctg cgcgggcaca agaagtttgc ggaatgcgcc aacgtctact
     2581 ccaagggcat tgcgaccatt tcgaagccgg aaaaagcgaa ctggatcgtc ttttatttcc
     2641 gcggcatttg ttacgagcgc tcgaagcagt gggcgaaggc tgagatagac ctcaagaaag
     2701 cgctcgagct gttccccgat cagccgcacg tgctcaatta cctcggttat tcctggatag
     2761 accagggcgt caagctggac gagggcatgg agatgatcaa gaaggccgtc cagcagcggc
     2821 ctgatgacgg ctatatcgtc gactctctcg gctgggccta ttaccgcctc ggcaattacg
     2881 aggaagccac caagcagctc gagcgcgcga tcgaactcaa gccggaggat ccgacgatca
     2941 acgaccacct aggcgatgct tactggaggg tcggtcggat actcgaggcc aaattccagt
     3001 gggcccatgc gcgtgatctt aaacctgacg cggaggagct cccgaagatc gaggagaaac
     3061 tcaagtcagg cttgcccgac gagacttcat cgcaggccaa ggccgtgagg aaaagcgggg
     3121 acggcggctg atagctgacg cgtaagcgat aggtcttcgt gtgggcgtga cgctgctcga
     3181 gaaggctcct gccaaaatca acctgacatt gcgagtgctc ggccgccgcg ccgacggcta
     3241 tcacgaactg gaaagtctcg tggcatttgc ggacgtggcc gatacgctga cacttgagcc
     3301 tgacaccaag gatacgcttg agatcactgg tcctttcgcg gccgatagcg gggccattcc
     3361 cgacaacctg gtgctgaagg cgcttgccgc tgcgcgcatt tgtatcgggg cggtcaaggc
     3421 tggccgcttt tcgcttgaaa aaaacattcc ggtagcagcc ggtctcggcg gcggttcggc
     3481 cgacgccgcg gcgacgttgc ggctgattgc cggcgtcaat gaaattgctc tcgatgatgc
     3541 gcgcatcatg tcggcggcgc aggccgtggg cgccgatgtg ccggtctgtg ttgcatcgcg
     3601 cccgcgcatc atgcgcggtg tcggcgagtt gctctctgat ccggtagacc tgccgccgct
     3661 ggcgggagta ctggtcaatc cgcgtatccc cctgtcgacc cgcgatgtgt tcggaaaatt
     3721 tgtcagggcg cagggcggaa atgatctcgg g
//
LOCUS       DATDHO010000300         1992 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_410520, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000300 DATDHO010000000
VERSION     DATDHO010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1992
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410520"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(76..>1992)
                     /locus_tag="VIY07_05735"
     CDS             complement(76..>1992)
                     /locus_tag="VIY07_05735"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HEY6381288.1"
                     /translation="QWFDVIPPLLGIATIIYALMQGDDFTDRAAVPEKWDVILGAIFI
                     VLVLEAARRTTGWIMPLVAVCFILYAYFGPSLPPPWTHRGYDVSRLVGHLFITLEGIF
                     GVPIDVSATLIIMFTIYGAILLHSGAGKFFIDFSMGIMGGKPSSAGRAVVASSFLLGG
                     PSGSGVATTVMIGTVAYPMLAKAGFEKNAAGGLLAAGGLGAIISPPVLGAAAFLIAEF
                     LKISYLDVIWMATIPTCLYYLSLLFMVELDALRFGAHEVAFKPEMSVWEMTRRYGFHF
                     VSLVAVVVFMVIGYSPMLSVFYSTILAFAMSALQPDTSLGPRNVLLPILFVGFAAAVL
                     FTIPPIGASAFAAAFEAYFPMLVLLVIAVVAVIGLTPAGQQLIPTSKKLTAAMADGSI
                     GVLSAATTCAAAGIIVGIVTLTGLGLKFSSIVIAFAGGSLLLTAIYTALVVWIIGLAV
                     PVTASYIICAVIAAPALTKLGVPDFAAHMFIFYYAVLSEVSPPTALSPFAAAAITGGD
                     PYATTLQAWKYTLPAFLVPFVFVLDPQGVGLLMNIPKDGSLYDLIWITLKTAIGLAAL
                     AAAAQNWALRRNTRAERGLWLLAGLLLVFPSLLEGLAETITGLDIPYPAPFGLALVAA
                     ILLKQRFVPAKLPA"
BASE COUNT          481 a          579 c          592 g          340 t
ORIGIN      
        1 gtcagacctg tttttttgcc attcgtgaag cgcttcgaca ttcatagtcc tccctttgac
       61 tcttgttctt gtgcactatg caggaagttt cgccggaaca aatcgctgtt tcaataggat
      121 tgcggcgacc aaggctaagc cgaatggcgc gggataggga atatcgaggc cggtgatcgt
      181 ctcggccagg ccctccagca ggctggggaa caccagcagc agccctgcca gcaaccataa
      241 cccccgctca gcccgggtgt tccttcgcag cgcccagttc tgcgccgccg ctgcaagtgc
      301 tgcaagtccg attgcggttt taagggttat ccagatgagg tcatagagcg atccgtcttt
      361 cgggatattc atcagcagac cgacgccctg cggatcgagc acaaatacga atgggacgag
      421 gaatgccggc aatgtgtatt tccaggcctg caaggtggtg gcgtatggat caccgccagt
      481 gatggctgcg gcggcgaatg gcgacagcgc cgtcggaggc gatacctccg acaggaccgc
      541 gtagtaaaat atgaacatat gcgccgcaaa gtcggggacg ccgagcttgg tcaaagcggg
      601 cgcggcaatc actgcgcaaa taatgtagga ggcggtcacc ggcacagcga gcccgatgat
      661 ccagaccacg agcgccgtgt agatcgcggt cagcagcagg ctgccgccgg cgaaagcgat
      721 cacgatcgac gagaacttca gtccgagacc ggtgagcgtc acgatgccta cgatgatgcc
      781 ggcggccgcg caggtcgtcg cggcgctcag cacgccgatc gacccatcgg ccatggcggc
      841 ggtgagcttc ttggacgtcg ggatcagttg ctgcccggcc ggcgtcaggc caatgaccgc
      901 aaccactgcg atcacgagca aaaccagcat cgggaagtag gcttcgaatg ccgctgcgaa
      961 cgccgaagcg ccgatcggag gaattgtaaa cagcaccgcg gcggcgaacc cgacgaacag
     1021 aattggaagc agcacattgc gaggaccgag actcgtgtcg ggctgaagcg cactcatcgc
     1081 aaacgcaagt atggtcgagt agaaaaccga aagcatcggc gaatagccga tcaccatgaa
     1141 gaccacgacc gccacgagcg atacgaagtg gaaaccgtag cgcctggtca tctcccagac
     1201 cgacatttcg ggcttgaaag ccacctcgtg cgcgccgaaa cgcagcgcgt cgagctcaac
     1261 catgaacagc agtgaaaggt aatagaggca tgtcgggatg gtcgccatcc agatcacatc
     1321 gaggtaactg atcttcagaa actcggcgat caggaacgcg gctgctccca gcaccggtgg
     1381 ggaaattatc gcgccaagtc ctcccgctgc cagcaagccg cccgctgcat ttttctcaaa
     1441 accggccttg gccaacatcg gataagccac ggtgccgatc atcactgtcg tcgcaactcc
     1501 cgagccggat ggaccgccga gaagaaacga agatgcgact accgcgcggc ctgcactcga
     1561 tggtttgcct cccattatgc ccatggagaa atcgataaag aacttgccgg cacccgaatg
     1621 cagcaggatc gcgccgtaaa tggtgaacat gatgatcagc gttgctgata catcgatggg
     1681 tacgccaaaa attccttcca gcgtgatgaa cagatggccg accagccgcg agacgtcgta
     1741 gccgcgatgt gtccagggcg gcggcaagct gggtccgaaa taagcgtaga gaatgaaaca
     1801 gactgcaacc agcggcatga tccagccggt ggtacgccgg gcagcttcca aaaccagcac
     1861 aatgaagatc gcaccgagga tgacgtccca tttttccggc acggctgcgc ggtcggtgaa
     1921 atcgtcccct tgcatcaagg cataaatgat tgtcgcaatg ccgagcagcg gcggaatcac
     1981 gtcgaaccac tg
//
LOCUS       DATDHO010000301         1600 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_162775, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000301 DATDHO010000000
VERSION     DATDHO010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_162775"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VIY07_05740"
     CDS             <1..219
                     /locus_tag="VIY07_05740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381289.1"
                     /translation="KAILAFRRSGVTILLVEQNARVALALSERGYVIETGRVVLSDDS
                     ASLKRNPRVIASYLGGSSSAGANGRRVH"
     gene            286..1419
                     /locus_tag="VIY07_05745"
     CDS             286..1419
                     /locus_tag="VIY07_05745"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381290.1"
                     /translation="MTRLMKLGCQLHALAVIALILAAAGTARADIKIGVFGPMTGDAA
                     GYGQSLREAVELVVNEKNAAGGLLGQKISVVYGDDAGKPEQAVSVAKRLTANDEVLIM
                     LGSISSPASLAASQVAQQSETPQIVISGTAQRITTQGNKWVFRSAIPDTTFAADLVDF
                     INEKFPGKKKVAFIYVNDDFGKGGFEGFKTRGQKYGLQIVAEERYTRGDLDFTSQLSR
                     IKESGADFMVDWSRYAEGALIIKQMKQMGINMPYFGSDGQAHPKFRELGASATEGAYY
                     PTHFSVTAIGGNKVAQDFTAKIRAAYNKDPDFVHAQAFDAMTATIMAIQKAGAADRTK
                     IRDALRSVEFDSVRGRFKFDEKGDPTLQATVVIVKDNKEANAR"
BASE COUNT          374 a          430 c          480 g          316 t
ORIGIN      
        1 aaagcaatcc ttgcctttcg gcgttcggga gtgacgatcc tgctcgtcga gcaaaacgcg
       61 cgcgtcgccc ttgcgctgtc tgaacgcggt tatgtgatcg aaaccggccg ggtcgtcctg
      121 tcggacgatt ccgccagtct gaagcgcaat ccgagagtga tcgcaagcta tctcggcggt
      181 agttcgagcg ctggcgctaa tggcagaagg gtgcattgaa aaacttgaac gagaggaccg
      241 tgaaggtttc gtatcgaaat aatcaagccc cgcatggagg tgaacatgac aagattgatg
      301 aagctcggtt gtcaattgca tgcattagca gtgatcgcac tgattttggc tgccgccggc
      361 accgcgcgtg cagacatcaa gatcggcgtc ttcggcccca tgaccggcga tgccgctggc
      421 tacggtcaaa gcctgcgcga ggccgtcgaa ctcgtggtca atgaaaagaa cgcggccggc
      481 gggttgctcg gccaaaaaat cagcgtggtc tacggcgacg atgcgggcaa gccggaacag
      541 gccgtcagcg tggccaagcg cctcacggcg aacgatgaag tcctcatcat gctcggcagc
      601 atttctagtc cggcaagtct cgcggcttca caggtggccc agcagagcga aacaccgcag
      661 atcgtaatat ctggtaccgc tcaaaggatt accacgcagg gcaacaagtg ggtttttcgc
      721 tcggcgattc ctgacaccac gttcgccgcg gacctcgttg acttcatcaa cgagaagttt
      781 cctggcaaga aaaaggtcgc cttcatttac gtcaatgacg acttcgggaa gggcggcttc
      841 gagggattca agacaagagg acagaaatac ggcctgcaaa tcgtcgccga agagcgttac
      901 acgcgcggcg atctcgactt caccagtcag ttgagccgta tcaaggaatc tggcgcggac
      961 ttcatggtcg actggtcgcg ctacgcggaa ggcgcactca tcatcaagca gatgaagcag
     1021 atgggcatca acatgcccta tttcggttcg gacgggcagg cgcatccgaa attccgcgaa
     1081 ttgggggcaa gcgctacgga aggtgcgtac tacccgaccc acttcagcgt tactgccatc
     1141 ggcggcaaca aggtcgcgca agacttcacc gctaaaatcc gcgccgcgta caataaggat
     1201 ccagacttcg tccacgctca agctttcgac gcgatgacgg caaccatcat ggcaattcag
     1261 aaagctggcg cggccgacag aacgaagatc cgtgacgcac ttcgatctgt cgagttcgac
     1321 agcgttcgtg gccgctttaa gttcgacgaa aagggtgacc cgaccctgca ggcgaccgta
     1381 gtcattgtta aggacaacaa ggaggctaat gcgcgctgac gccgtcgtgg atggtgaaag
     1441 ctgtttttgg ttcggcggaa ttagtcgaat cgaatggtct gtatagatcc ggaagcgcgg
     1501 accgggcgat cggggccgcg ctgccgtgcg ttttgtccgt aactgttctc gtggatggtg
     1561 gggagagttc tcatggcaga caagatcaat ctaaagcgat
//
LOCUS       DATDHO010000302         2665 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_61807, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000302 DATDHO010000000
VERSION     DATDHO010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2665
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61807"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..237)
                     /locus_tag="VIY07_05750"
     CDS             complement(<1..237)
                     /locus_tag="VIY07_05750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine 2,3-aminomutase"
                     /protein_id="HEY6381291.1"
                     /translation="MTITSKALRTPADLCARGLVPPERQPDLDAVVARYAVALPEPLS
                     QLIDPNDPDDPIARQFVPDPAELEHQAVESADPIG"
     gene            complement(376..1383)
                     /gene="epmA"
                     /locus_tag="VIY07_05755"
     CDS             complement(376..1383)
                     /gene="epmA"
                     /locus_tag="VIY07_05755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003599277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P lysine aminoacylase EpmA"
                     /protein_id="HEY6381292.1"
                     /translation="MNVPKSPSFWAPGAYAARRSYLLARGRIIAALRTWFAKQGFVEV
                     ETAAIQVSPGNETHLHAFATELIAPGGGRQQVFLHTSPEFACKKLLAAGESRLVSFAR
                     VFRNKERGALHHPEFTMLEWYRANETYETLMDDCVAILAETARAAGTEEFQFRGKTID
                     PFAPAERLTVADAFGRYAGVDLLGTVKTGRGDRGALAAEADRIGVATAADDTWGDIFS
                     RILAERIDPQLGIGRATILCEYPLPLAALARRKADSDAVAERFELYACGVELANAFGE
                     LTDVAEQRARFEAAMAEKERIHGERYPIDEDFLAALGQMPPASGVALGFDRLVMLATG
                     A"
     gene            1486..2055
                     /gene="efp"
                     /locus_tag="VIY07_05760"
     CDS             1486..2055
                     /gene="efp"
                     /locus_tag="VIY07_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010968469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEY6381293.1"
                     /translation="MVKVIASSLRKGNIVEVDGKLYVVLTAENFHPGKGTPTTQVDMR
                     RISDGVKTSQRYKTTDQVERAHVEDHEFSYLYQDGDGFHFMNQETYDQVHVPADVVGD
                     FAVYLQEGMVVNMSVHEGVPVAIELPQKVTLEIVDTEPVVKGQTASGSFKPAKLSNGV
                     RTMVPTHITTGTRVVVSTADGSYVERAKD"
     gene            complement(2249..2548)
                     /locus_tag="VIY07_05765"
     CDS             complement(2249..2548)
                     /locus_tag="VIY07_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381294.1"
                     /translation="MISSYTEIIRLAALSCKPKPSLAELKELDYGLSEIGDAASRLVV
                     MARKLMKGKPFRVLSNDPELLREYRALGKALGAQINVVEQDDWPTELHFTPRLPQ"
BASE COUNT          540 a          805 c          765 g          555 t
ORIGIN      
        1 accgatcggg tcggcgcttt cgacggcttg gtgctcaagt tcagccggat cgggaacaaa
       61 ctgccgcgcg attggatcat ccggatcatt cggatcgatt aattgggaca ggggctccgg
      121 cagcgcgacg gcatagcggg cgacaacggc gtccaggtcg ggctgccgtt cgggcggaac
      181 gaggcctcgc gcgcaaaggt ccgcaggcgt gcgaagggcc tttgaagtta tcgtcatgac
      241 ctgcctgtcc attcgtggat gcccgccttg tgccgggcat caacgtcctt aacaagagaa
      301 aaatgggcgt ggatggccga gccaagccac gccttaaccg tcggcaaccg gcgtccagat
      361 cacctgatcg atacgttacg cgcccgtcgc cagcatcacc agccgatcaa atccgagcgc
      421 aaccccgctt gcgggcggca tttgcccgag agccgcgaga aaatcttcat cgatcgggta
      481 acgctcacca tggatccgtt ctttttccgc catcgccgcc tcgaaacggg cccgctgctc
      541 cgccacatcg gtcagctcgc caaaggcgtt ggcgagctcc acgccgcacg cataaagctc
      601 aaagcgctct gcgaccgcat cgctgtccgc tttgcgtcgt gcgagcgctg ccagcggcag
      661 cgggtattca cataggatgg tggcgcgacc aattccgagt tgcggatcga tgcgttcggc
      721 caggatgcgg ctgaagatat ccccccaggt gtcatcggcg gcagttgcaa cgccgatcct
      781 gtccgcttcc gcagcgagcg cgccacgatc gcccctgccc gttttgaccg tgcccaacaa
      841 gtcgactccg gcataacgac caaaggcatc ggccaccgtc agtcgttcag ccggcgcgaa
      901 gggatcgata gtcttgcctc gaaattggaa ttcctctgtg cccgccgcgc gtgcggtctc
      961 tgccaggatc gccacgcagt catccatcag cgtctcatac gtctcattcg cccgatacca
     1021 ttccagcatg gtgaattcag gatgatggag cgcgcctcgc tccttgttgc ggaacacgcg
     1081 ggcaaagctg acgaggcggc tttcaccggc ggccaggagt ttcttgcagg caaattccgg
     1141 cgaggtatga aggaatacct gctggcgccc tcctcccgga gcaatcagct cggttgcgaa
     1201 ggcgtgcaga tgggtttcgt ttcccggcga aacctgaatt gccgcggttt cgacttcaac
     1261 aaaaccttgc tttgcaaacc aggtgcgaag agccgcaatg atgcgcccgc gcgccaggag
     1321 ataggacctg cgcgccgcat aggcgccggg agcccagaag gatgggcttt tcggcacgtt
     1381 cacctcggcc cgcgaacacg cgggaaaagc tggcatcggc cgagaagatc gctatgttgc
     1441 cgcccgaaac cgcggccgac ggccgccaat acatcaggga tcattatcgt gaaggtcatc
     1501 gcttcatcgc tccgtaaagg caatatcgtc gaggttgacg gcaagctcta tgtcgttctc
     1561 acggcagaaa attttcaccc tggcaaaggg acgccgacca cacaggtcga tatgcgccgg
     1621 atttccgacg gcgtgaagac ctctcagcgc tataagacca ccgaccaggt ggagcgtgcc
     1681 cacgtcgagg atcacgaatt cagctatctc tatcaggatg gcgacggttt ccacttcatg
     1741 aaccaggaga cttacgacca ggttcacgtg cccgctgacg tcgtcggcga ttttgccgtt
     1801 tatctccagg aaggcatggt cgtgaatatg agcgtccacg aaggcgtccc ggtcgccatc
     1861 gaactgccgc agaaagtcac gctcgaaatc gtcgacacag agccggtggt gaaaggccag
     1921 accgcgtcgg gctcattcaa accggccaag ctttcgaatg gcgtgcgcac aatggtgccg
     1981 acccatatca ctacgggcac ccgggtggtc gtgagtactg ccgatggctc ctatgtcgag
     2041 cgcgccaagg attgaacgta acgcccgtaa cgttctttat cggacactga gctggcctgt
     2101 gtggaccaga atttatttca cagtgatgat tgcgatttgg cttgccgccg cttggtttct
     2161 tttgtttggc ccgaagccag tttcgctcat gggctctata ccttcgatct ggccgttcta
     2221 gtcgttgccg ctcaactggc gagaacgatt actgtgggag cctgggcgtg aaatgcagtt
     2281 cggtcggcca atcgtcttgt tcaacgacat tgatttgagc accaagtgcc ttaccaagcg
     2341 cacggtactc gcgaagtaat tcaggatcgt tgcttaggac ccgaaagggc tttcccttca
     2401 tcagtttccg agccatgacg actagccttg aggccgcgtc tccaatttcg gagaggccat
     2461 agtccaattc tttgagttcg gccaacgatg gttttggctt gcacgacagc gccgccagtc
     2521 tgatgatttc cgtataactg ctgatcatgt gtcgcccccc tcggaaataa tctatcacgt
     2581 gttcggctgt ttgactgccc agccgtgacc ataccttctc tcctcttcac ggacaccgca
     2641 cggatacgct gaggtacggc tggca
//
LOCUS       DATDHO010000303         1698 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_212328, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000303 DATDHO010000000
VERSION     DATDHO010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212328"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1078..>1698
                     /locus_tag="VIY07_05770"
     CDS             1078..>1698
                     /locus_tag="VIY07_05770"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6381295.1"
                     /translation="MAIHFNQSTVAPIVSADGVARQALLNKQRVPGILFELDRLTVQS
                     GGHMALAIAPRELGWFQMIGGTATIRAAGRQLSVTTDHIGLLPPGFEGSLASDAGATL
                     LLASVPDAERLDPTIRTGPPPFRLMDWQDEPLLQSEQDARKRIYIVTPKMFGTRAIRG
                     EMIIYPPGTECPVHHHKGGAHFMFFLSGRGTCYAGADQVTPVQPGDV"
BASE COUNT          324 a          522 c          494 g          358 t
ORIGIN      
        1 gaaagtaacg cgcctgaggt tgaacggctg gccgccctct tgattgaaca aaggcgacta
       61 ggcgaaggcg gaattgctta ggcaacaatg ttcctctcga ataagctgtt gcaggcgcgt
      121 tttgggatat ccattttttg atttcactcg ccgtaaccgc aggaactttc accgctgaaa
      181 ttaccgccgg cgagccgtgc ggtttttcgc caatgagcgc aggaatagct gtcgaaggtc
      241 gttagtgact acatggacga gccacatgcg cgcagcgtac gaattatttt gattattatc
      301 atcgtagtga tgaccgcaat cctagttggg tcctacctgt ggtaagaacg ttactgcaat
      361 gcggttttga ttttcatcaa acgtcgagac gaaacgaata cagagaaagc ctgccggtcc
      421 ggtaatcacc ggcgcataca caggccggtg gctgccgtct cctgagtggc acatttcgcg
      481 ccatcggccg cgccgttcgc acacaccagt gaaaccaaag cttcatcgtc tccgcatcga
      541 acggtgcctg taccggtcac gacccgcaaa gccgcggccg ggcccgcatc tcccttcggg
      601 ccggcatctc ccttcgcgcc gggaggtccg gcgggacccg ctggtccttg tggaccttgc
      661 gctccggcag ttccagccgg cccttgcggg ccttgcgcac cggcaggacc acccggtcct
      721 tgtggtcctt gtggcccttg tgcaccaaca gcgccagccg gcccttgtgg gccttcggga
      781 cctggtgtgg gttgcccgca tccggtgacc gcaagtatca tgacgatggc gaaaaagctc
      841 agaagtcgct gcatcggcgc gcccccacta aattgaattg ataacttgca cccgccaatt
      901 catcgccgtc aatgatccgc ctgcgacgtg atgtccgccc ctgggctgac attcaactgc
      961 gacgtcaacg tctgctttcc gggcaccgcc gacctaagac aaactcacag agtgaccgct
     1021 tcacgcggtc aggagcacct ctttaagcga gccggttgag ccggtacgat gaggccgatg
     1081 gcgatccatt tcaaccagag tacggtcgcg ccgattgttt cggcagatgg cgtggcgcgc
     1141 caagcgttgc tgaacaaaca gcgtgtcccg ggcattctgt tcgagctcga tcgcctgacg
     1201 gttcagtcgg gtggccacat ggcgctggcg attgcgcctc gtgaactcgg ctggtttcag
     1261 atgatcggcg gcactgcgac cattcgcgcc gcggggcgcc agttgtcggt tacaaccgac
     1321 catatcgggt tactgcctcc aggtttcgag ggctcgctcg caagcgatgc cggggcgacc
     1381 ctgttgctcg cttcggtgcc cgacgcggaa agactcgatc ccactattcg taccggtccg
     1441 ccaccttttc gtctcatgga ttggcaagac gaaccactgc tgcaatccga gcaggatgct
     1501 cgcaagcgca tctatatcgt gacgccgaag atgttcggga cgcgggccat ccgtggggaa
     1561 atgattatct atccgccggg tactgaatgc cccgtgcacc accacaaggg tggcgcccat
     1621 ttcatgttct tcctcagtgg gcgcggcacc tgctacgcgg gcgctgacca ggtcacgccg
     1681 gtgcagcccg gcgacgtc
//
LOCUS       DATDHO010000304         2552 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_61835, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000304 DATDHO010000000
VERSION     DATDHO010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2552)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2552)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2552
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_61835"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..183)
                     /locus_tag="VIY07_05775"
     CDS             complement(<1..183)
                     /locus_tag="VIY07_05775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6381296.1"
                     /translation="MSAAQVTLRGVTKVFPATGGGEPVHALGPIDIEIRKGEFFAVVG
                     PSGCGKSTLLELIAGLT"
     gene            complement(211..411)
                     /locus_tag="VIY07_05780"
     CDS             complement(211..411)
                     /locus_tag="VIY07_05780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381297.1"
                     /translation="MATSAIKNLINSTTEGIPYWGEGDIHLDGMKRIIEVQKSVGALT
                     GDIDLSKIIDTRFLPDDLKKVK"
     gene            complement(384..1196)
                     /locus_tag="VIY07_05785"
     CDS             complement(384..1196)
                     /locus_tag="VIY07_05785"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381298.1"
                     /translation="MIGRMFARFMFPSLVLMLATHVASAESIAIGNYGSSANGMPFGI
                     ALAKGYFQEEGANVTGIIASEGGGTSVRNAMAGVAYGEANPGAIAVAIQQGADLRIVS
                     DNVLTIAEFAWMVKKDSPIKTIADLKGKKIGYTNPRSTSQALDILLLNKAGLKPEDAE
                     LVKTGGFGPMVAALELGHIDVAPVTEPLWSKMKDKFRVLITGSEALPPLDNVVGVATA
                     QAVATRGDFISAVIRARRRAIAFMRANPEEAGEILPSPSTSLRKWQQARSRT"
     gene            complement(1300..2196)
                     /locus_tag="VIY07_05790"
     CDS             complement(1300..2196)
                     /locus_tag="VIY07_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007199049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY6381299.1"
                     /translation="MANPMIPRDRADYSAIVDRPPLKLPGNARIVFWTIVNYEVWDIG
                     KPMARQLLPAPTGVQLMPDVVHWAFHEYGMRVGCWRFFELFKRLGIKPTLAANARICE
                     DYPRVAEEARDAGWEFMGHAYEQGPIHKEADQAGMIRRTMDILTKFTGKKPVGWLGPG
                     LTQTLDTPELLAAAGVKYIGDWVYDDEPTVIRTANGPLVTLPYTVELNDIPMMLIQHH
                     ESDYLLKRTIDQFDRLYAESAKRAKFCALAIHPYISGQPHRIKYLEQIYDYVNKHEGV
                     LHWNGEQILEWYRSIAKVEAAA"
     gene            complement(2336..>2552)
                     /locus_tag="VIY07_05795"
     CDS             complement(2336..>2552)
                     /locus_tag="VIY07_05795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381300.1"
                     /translation="DELIAAMKTMLADRRIAIILVEQHTDIALEMTANAIVLERGAVA
                     HRATSAELLKDTATLERLVGLRVAATA"
BASE COUNT          451 a          775 c          781 g          545 t
ORIGIN      
        1 ggtgaggccg gcgatgagct cgagcagcgt cgattttccg caaccggatg gaccgacaac
       61 ggcgaaaaat tcgccctttc tgatctcgat atcgattggc ccgagggcgt gcacgggctc
      121 gccgccgcca gtagcgggaa atactttcgt cactccgcgc agcgtcacct gtgccgcgga
      181 cacgcgatca tcctccgtgc gcgcggtgtc ctatttcact tttttgaggt catccggcag
      241 gaaccgggta tcgatgatct tggacagatc gatgtccccg gtcagcgcac ccacgctttt
      301 ctgcacctcg atgatgcgct tcatcccgtc gaggtggata tcgccctcgc cccaataggg
      361 aatgccctcg gtggtgctgt tgatcaggtt cttgatcgcg cttgttgcca cttccggagt
      421 gatgttgaag ggcttgggag gatctcgccg gcttcttcgg gattggctcg catgaacgcg
      481 atggcacgcc ggcgcgcgcg aatcacggcg ctgatgaagt cgccgcgcgt cgccaccgcc
      541 tgggccgtcg ctacgccgac cacgttgtcg agtgggggca acgcctccga accggtgatg
      601 agcacgcgga acttgtcttt cattttcgac cagagcggct cggtgaccgg cgcgacatcg
      661 atgtgcccaa gctcaagggc tgcaaccatc ggtccgaagc cgccggtctt cacaagctcg
      721 gcatcctccg gcttgagccc tgccttattg agcaaaagga tgtcgagcgc ctggctggtc
      781 gagcgcggat tggtgtagcc aatcttcttg cccttgaggt cggcaattgt cttgatcggc
      841 gaatccttct tcaccatcca ggcgaattcg gcgatggtca gcacgttatc gctcacgatc
      901 cgcagatcgg cgccttgctg gatggcgaca gcgattgcgc cgggattggc ctcaccatag
      961 gccacgccgg ccatcgcatt gcggaccgac gtaccgccgc cttcggaagc gatgatgccg
     1021 gtgacattgg cgccttcttc ctgaaagtat cccttggcta acgcaattcc gaacggcatc
     1081 ccgtttgcgg atgaaccgta attgccgatg gcaatacttt ctgcgcttgc cacatgggtg
     1141 gcgagcatca gaactaatga tggaaacatg aaacgcgcaa acattcggcc aatcatcgtt
     1201 tcctcctgcc cgtaatccgc cggattaatc cggccttgtc gtgtggcgat tctcgatttc
     1261 cctctctcgt cggggatttc agaagaagaa ccaatgccgc tatgcggcag cctcgacctt
     1321 ggcgatgctg cggtaccatt cgaggatctg ctcgccgttc cagtgcagca caccttcgtg
     1381 cttgttcacg tagtcgtaaa tctgctcgag atatttgatc cggtgcggct gcccgctgat
     1441 atacggatga atcgccagcg cgcagaactt tgcgcgcttt gcgctttcgg catagagccg
     1501 gtcgaactgg tcgatggtgc gcttgagcag atagtcgctc tcgtgatgct ggatcagcat
     1561 catcggaata tcgttgagct cgacggtgta gggcagggtg acgagcggcc cgttggcggt
     1621 gcggatcacc gtcggctcgt cgtcatagac ccagtcgccg atgtatttca cgcctgctgc
     1681 cgcgagcagt tccggcgtgt ccaacgtctg cgtaagtccc ggacccagcc agccgacggg
     1741 cttcttgccg gtgaatttgg tcagaatgtc catggtccgc cggatcatgc cggcctggtc
     1801 ggcctccttg tggatcggac cctgctcata ggcgtggccc atgaattccc agccggcatc
     1861 gcgcgcctct tcggcgacgc gcggatagtc ctcgcagatg cgggcattgg cggcgagcgt
     1921 cggcttgatg ccaaggcgct tgaatagttc gaagaaacgc cagcagccga cccgcatgcc
     1981 gtattcgtgg aaggcccaat ggacgacgtc aggcatcagc tgaacccccg tcggggccgg
     2041 gagcagctgg cgcgccatcg gcttgccgat atcccagacc tcgtagttca cgatggtcca
     2101 gaacacgatg cgggcgttac ccggcagctt gagcggaggg cgatccacga tcgcggaata
     2161 gtcggcacgg tcgcggggaa tcatggggtt ggccatgcag gacttccttt tcgaggtcat
     2221 tccggggcgc gggcgaagcc tgcgaacccg gaatccagaa tttatgcaac gctttgcaat
     2281 agcgctggat tccaggtccg cgccttcggc gcgtcccgga atgaccggta ctttctcacg
     2341 ccgttgcggc gacgcgcaag ccgaccagcc gctcgagcgt ggcggtgtct ttcagcagct
     2401 cggccgaagt cgcacgatgc gccacggcgc cgcgctccag cacgatggca ttggcggtca
     2461 tttccagcgc gatatcggtg tgctgctcga ccaggatgat ggcgatgcgg cggtcggcca
     2521 gcatcgtctt catcgccgca ataagctcgt cc
//
LOCUS       DATDHO010000305         3747 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_360456, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000305 DATDHO010000000
VERSION     DATDHO010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3747)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3747)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3747
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360456"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..633)
                     /locus_tag="VIY07_05800"
     CDS             complement(4..633)
                     /locus_tag="VIY07_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY6381301.1"
                     /translation="MYTLYSMQRSGNSYKVRLALARLGIPYNLVEIDILKGESRTPEF
                     LSKNPNGQVPLLEVAPGRHLAESNAILWYVAGGSTLAPEDRIARAEALQWMFFEQHSL
                     EPNIGAAYFWLTMIKGGRELQSHALEDWMENGYRALGVMETHLSRFPYFVANHFTIAD
                     IALYAYTHVAEQADFHLSRFPAIRAWLARIADEPGYIPMTWQPELVPAK"
     gene            1141..2346
                     /locus_tag="VIY07_05805"
     CDS             1141..2346
                     /locus_tag="VIY07_05805"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEY6381302.1"
                     /translation="MAFLADQLKRIKPSATIAVTDKARALKLAGRNVIGLGAGEPDFD
                     TPDNIKQAAVKAIESGKASKYTNVDGIAELKDAIVKKFKRENQLDYKSSQVTVGTGGK
                     QVLYNAFVASLNPGDEVVIPAPYWVSYPDMVLLAGGEPVEVVTSMSNGFKMTAEQLER
                     AITPKTKWVLLNSPSNPTGAAYTRAELKALTDVLVKHPHVHVMTDDMYEHLVYDDFVF
                     TTPAQVEPSLYPRTLTINGCSKAYCMTGWRIGYAGGPEPLIKAMAMIQSQSTSNPAAV
                     SQWAAVEALNGPQDFIAKHNKIFKERRDLVVSMLNQANGIKCPTPEGAFYVYPSCAGT
                     MGKTAPTGKKLATDEDFVTELLEAEGVAVVQGTAFGLGPAFRISYATKTEDLEEACRR
                     IQRFCGNLK"
     gene            2515..3519
                     /locus_tag="VIY07_05810"
     CDS             2515..3519
                     /locus_tag="VIY07_05810"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381303.1"
                     /translation="MSRLKFALLCIVIGLPSPAAAQERVLVGTQRLAENGALFLAAAQ
                     GYFKAEGIDLGMTAYESDQAVAETLAAGTTDFGLAGFTPAAFNAGGKGLIKAIAAQVR
                     EKRYYEGSELVASNFGFAKGLRTFADVANKSVAISALGSASHYQLEQIARIKQIDVNR
                     ISVKPMSTLDAIARAVGTNQVDAAILPSRYARELLAANHAKLVGWYSELDEQQLGALF
                     VSSKMIATRRSVVEKFVRAYRRGVADYSAALLRKDIHSKRTSDMKSHEAATTIARYVY
                     PDRGESGAAAVEASAYFIEPQSQIDLADLERQVAWHKARGRIDKNVTAREVVDLSFIK
                     "
BASE COUNT          808 a         1092 c         1105 g          742 t
ORIGIN      
        1 gcgttatttc gccggcacca gctccggctg ccaggtcata gggatgtagc ccggctcgtc
       61 ggcaatgcgg gcaagccagg cgcgaatcgc cggaaatcgg ctgaggtgga aatcggcctg
      121 ttcggcgacg tgtgtgtagg cgtacaacgc gatgtccgcg atggtgaagt ggttcgcgac
      181 gaaatacgga aaacggctga ggtgggtttc catcacgcca agtgcgcgat agccattttc
      241 catccaatct tcgagggcat ggctttgcag ctcgcggccg cccttgatca tcgtaagcca
      301 gaaataagca gccccgatgt tcggctcgag gctatgttgc tcgaagaaca tccattgcaa
      361 cgcttcggcg cgtgcaatgc ggtcttccgg cgccagagtt gagccgccgg cgacgtacca
      421 aaggatggca tttgattcgg cgagatgccg cccaggtgcg acttccagca gcggcacctg
      481 tccattcgga ttcttgctga gaaattccgg cgtgcggctt tcacccttga ggatgtcgat
      541 ctccacaagg ttgtacggga ttccgagccg ggcgagcgca agacgcacct tgtagctatt
      601 cccggagcgc tgcattgaat agagcgtata cattcagact aagatccgta tgcgcgtagc
      661 ctatccgaga gctggttcga accgctcaag gtcgaggact aacattgtcg tgcagcaccc
      721 ccgaagcgta cgtcgatacg atagaacgga taaagtctgg caattgcaag gccacccgcc
      781 acttcacgaa aatatcaaat gcactcggtg cagcgcagcg agcgaatgca aatttcccgc
      841 gctgcagtaa atggaaattt tgttctttcg ctcatgccgt gcctgatgcc gccgctgtat
      901 tgatggggta cgaggatgtt tcgccaccgc cgcgtatttg gaagatgatc gaagcaggcc
      961 tcgagcaggt agtagggtca aaagcctgtt gctgtggccc tcaggcttcg tgcccttgga
     1021 cgaatgatcg gtaggaacga tcgaattgat cgaatttctt taacaaatcg ccccttgctg
     1081 gactcgtcgg tccgcattac cacagggatg tacgccgcac tgcggcaaag gagagtttcg
     1141 atggccttcc tcgcggacca gctcaagcgc atcaagccgt cggcgaccat tgcggtgacg
     1201 gacaaggcgc gcgcgctcaa actggccggc cgcaacgtga tcggcctcgg cgccggcgag
     1261 cccgattttg atacgcccga caatatcaag caggcggcgg tgaaagcgat cgaaagcggc
     1321 aaggcctcga agtacacgaa tgtggacggc atcgccgagc tgaaagacgc catcgtcaag
     1381 aagttcaaac gcgagaacca gctcgactat aagtcgagcc aggtgacggt gggcaccggc
     1441 ggcaaacagg tgctgtacaa cgccttcgtc gcgagcttga acccgggcga cgaggtcgtc
     1501 atcccggccc cgtactgggt cagctatccc gacatggtcc ttctggccgg tggcgagccc
     1561 gtggaggtcg tcaccagcat gtcgaatggt ttcaagatga ccgcggagca gctcgagcgc
     1621 gcgatcacgc caaagaccaa atgggtgctg ttgaactcgc cgtctaaccc gacgggggca
     1681 gcctacacgc gcgccgaatt gaaagcgttg accgacgtgc tcgtgaaaca tccgcatgtc
     1741 cacgtgatga cggatgatat gtacgaacac ctggtctacg atgactttgt gttcacgacg
     1801 ccggctcagg tcgagccttc cctttatcca cgcacgttga ccatcaacgg ttgctcgaag
     1861 gcctattgca tgacgggctg gcgcatcggt tatgccggcg gtcccgagcc tttgatcaag
     1921 gcgatggcga tgatccagtc acaatcgacc tcaaacccgg cggcggtctc gcaatgggct
     1981 gcggtggaag cactgaacgg cccgcaggat ttcatcgcca agcacaacaa gatcttcaag
     2041 gagcgccgcg acctcgtggt gtcgatgctc aaccaggcca acggcatcaa gtgtccgacg
     2101 ccggaaggtg ctttctatgt ctacccatcc tgcgccggca cgatgggcaa aaccgcaccc
     2161 accggaaaga aactcgccac cgacgaggat ttcgtcaccg aactcctcga ggccgagggc
     2221 gtggcggtcg tgcagggtac cgcattcgga ttgggcccgg cttttcgcat ttcctatgcg
     2281 acgaagaccg aggatctcga ggaagcatgc cggcgcatcc agcgcttctg cggcaacttg
     2341 aaatagactc cagcttggcc gggatccggg caaacatact ccgttcattc ccgcgtaagc
     2401 ggaaatccag cactgggtcc ccgctttcgc cgaatggaga attgtctttg aaaaacagtg
     2461 accggtttcc ctattcatct tttcttatgc aggacatcgc taacctgcag gaaaatgagc
     2521 cgtcttaagt ttgcgcttct ttgcattgtc atcggcttgc cgagccctgc cgccgcgcag
     2581 gagcgcgttc tcgtcggcac acagcggctg gccgagaatg gcgcgttgtt tctggccgcg
     2641 gcgcaaggct atttcaaagc cgaagggatc gatctgggca tgaccgccta cgagtccgat
     2701 caagcggtgg ccgaaacgct cgctgccggc acaaccgatt tcggccttgc cggtttcaca
     2761 cccgcggctt tcaacgccgg cggcaaaggc ctgatcaagg cgatcgcagc gcaagttcgc
     2821 gaaaagcgct attacgaggg cagcgagctc gtcgcctcaa attttggctt tgccaaagga
     2881 ttgcgtacgt ttgctgatgt cgcgaacaaa tccgtcgcca tcagcgcact cggatccgcc
     2941 tctcactatc aactcgagca gattgcccgc atcaagcaaa tcgatgtcaa tcgcatcagc
     3001 gtgaagccga tgtctacgct ggatgccatc gcacgcgcgg ttggcaccaa ccaggtcgac
     3061 gccgcgatct tgccctcgcg ctatgcacgc gaactccttg cggccaatca cgccaagctc
     3121 gtcggctggt actcggaact cgacgagcaa cagctgggcg cactgtttgt ctcgagtaaa
     3181 atgatcgcga cgcgacgctc agtggtggaa aaattcgttc gggcctaccg ccgtggggtc
     3241 gccgactaca gtgccgcgct gctgcgcaag gatatccact ctaagcgcac ctctgacatg
     3301 aagtcgcacg aggccgcgac aacgatcgcg cgttatgttt atccggaccg cggcgaaagc
     3361 ggcgcggctg cggtcgaagc cagtgcatat ttcattgagc cgcagtcgca gatcgatctg
     3421 gcggacctcg aacgtcaggt cgcatggcac aaggcccggg ggcggatcga caagaatgtc
     3481 accgcgcgtg aagtggttga tctgagcttc atcaaataaa ttattttgag cgcggcaact
     3541 ctccgctctt gccagcctcc ccgttgcctg agacgataat gtgacagggc cgggaaacca
     3601 ggtccgacct cccggccggc aagggaggga attatgggac aaaacggcgc tggtcccaat
     3661 ggcacgagga actcgggtcc ccggtgcatt gcgctggtgg gcccttttca aagcggtaaa
     3721 acgacacttt tggaggcaat tctcgct
//
LOCUS       DATDHO010000306         1688 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_410774, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000306 DATDHO010000000
VERSION     DATDHO010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410774"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..1586
                     /locus_tag="VIY07_05815"
     CDS             66..1586
                     /locus_tag="VIY07_05815"
                     /inference="COORDINATES: protein motif:HMM:NF006124.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase"
                     /protein_id="HEY6381304.1"
                     /translation="MTFDLSKSDVVVAVFGAGTMGRGIAQVCAQAGLATMLFDSRKGA
                     VEEAIAGVDKALAGLVSKGRMSSDAKHNVLDHIRPIHSLDQAKNADIVIEAIVEDVNA
                     KRELFRELERHLSHDAVLATNTSSLSVTEVAAACKRPERVGGLHFFNPPPLMRLVEVI
                     NGLRSDPALVEALTGFVKRINKHPVVAADTPGFVVNHAGRAYGPEALRIVSQGIASSR
                     EVDLLMKEAAGFRMGPFELLDLVGGDVAHAVMVSIFDQYFGEPMYQPSAQLAVRVAGG
                     LLGRKTGRGFYDYAGPAAVTPPTISVSSQPVPTSAWVADEDGGRELAEWLKSAGVMIQ
                     LGGQPPARGPCFVTPLGEDASSAAVRLKLDPARTVAVDMLGRFEGRRTVMKTPLTSAE
                     MLGAAVAALSAGNTPVTAINDSPGFVVQRILAMIVNIGTRIAEFRIAAPADIDTAVEL
                     GLNYPKGPLALGDNLGGARVLSVLDEMHAITHDPKYRATTWLRRRARLGLSLHAPD"
BASE COUNT          329 a          497 c          531 g          331 t
ORIGIN      
        1 atcagaagga aggcatgcgt gccttcctgg aaaagcgaaa gccgaagttc gaagggcagt
       61 gatgcgtgac atttgatctt tccaagtcag acgtcgtcgt tgcggtgttt ggggcaggca
      121 ccatggggcg cgggatcgcg caggtctgtg cgcaagcagg cctggccacc atgctgtttg
      181 attcgcgaaa gggagccgtg gaggaggcga ttgcaggggt ggacaaagct ctcgcaggcc
      241 tggtgtcgaa agggcgaatg tcgtccgacg caaagcacaa cgtgctcgat cacatcagac
      301 cgatccattc tttggaccag gcaaagaacg cggacattgt catcgaagcc atcgttgagg
      361 acgtcaatgc aaagcgagag ctgttccgcg aactggaaag gcatttgtcg catgacgccg
      421 tgcttgctac caacacatcg tcgctttcag tgacggaggt agccgccgct tgcaaaagac
      481 cggagcgtgt cggcggattg cattttttca atccgccgcc gctgatgcgc cttgttgagg
      541 tgatcaacgg cttgcggagc gaccccgcac tggtggaagc gctcaccggc ttcgtgaagc
      601 gcatcaacaa gcatccggtc gttgccgccg acacgcctgg ctttgttgtc aaccacgccg
      661 gccgcgccta cgggcccgaa gccctgcgga tcgtatcgca aggcatcgcg agctcgcgcg
      721 aggtcgatct cctgatgaag gaggctgccg ggttccggat gggcccgttt gaattgcttg
      781 atctcgtcgg cggcgacgtc gcccacgccg tgatggtgag catattcgac cagtattttg
      841 gcgagccaat gtaccaaccc tcggctcaac tggccgtgcg ggtcgccggt ggcttgttgg
      901 gccgcaagac cgggcgcggt ttctacgact atgccggtcc ggcggctgta acgccgccga
      961 cgatttcggt gtcctcacaa cccgtgccga catcggcctg ggttgcggac gaggatggtg
     1021 gccgcgagct cgcggaatgg ctgaagtccg cgggcgtaat gatccagctc ggcggacagc
     1081 cgcccgcgag ggggccctgt ttcgtcacgc cgttgggcga ggatgcctcg agcgccgcag
     1141 ttcgcctgaa gcttgatccg gcgcgcacgg ttgccgtcga catgctcggg cgcttcgaag
     1201 gccgccgcac agtgatgaaa actccgctga caagtgcgga aatgctgggt gcagccgttg
     1261 cggccctctc agctggcaat acgcctgtga ctgcgatcaa tgacagtccc gggttcgtcg
     1321 tgcagcgcat ccttgccatg atcgtcaaca tcggcacgcg tatcgccgaa ttccgcattg
     1381 cggcgccagc tgacatcgac actgcggttg agctcggcct gaactatccg aaaggcccct
     1441 tggcccttgg cgacaatctg ggaggtgctc gtgtgctttc cgtgctcgat gaaatgcacg
     1501 cgatcacaca tgatccgaaa tatcgcgcca ccacttggct gcgccggcgc gcgcggctcg
     1561 ggctttcatt gcacgcgccg gattaattgg caccaacaca agaaatcagg cctgcctcaa
     1621 ggaaaaatcg aagttatctc caagcttgcc gccgtccggg cagctatacc caaaaaacgc
     1681 caatactt
//
LOCUS       DATDHO010000307         2963 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_163007, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000307 DATDHO010000000
VERSION     DATDHO010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2963
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163007"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..813)
                     /locus_tag="VIY07_05820"
     CDS             complement(<1..813)
                     /locus_tag="VIY07_05820"
                     /inference="COORDINATES: protein motif:HMM:NF016289.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY6381305.1"
                     /translation="MQASVALTQDLVRFRTINPPGDERACAERLASLLEGAGFAVDVV
                     PFGNGRAQLVARIGGAAGKPPLGFTGHLDTVPLGAQPWSVDPFAAEILDGKLYGRGSS
                     DMKSGVAAFVAACVALADKLAGTAGVVLLITAGEETGCTGAADRPEPGRRFLRSARLS
                     WRSQPATMRWLATRERYGLKRSRPVSPRTAQCPKKASTRFTRRRAITALQDFDFNFAR
                     HDVLGGPTLNVGTIHGGLNINSVPDRAAIGIDIRTIPGQSHAKIRDQLASYLG"
     gene            complement(818..1528)
                     /locus_tag="VIY07_05825"
     CDS             complement(818..1528)
                     /locus_tag="VIY07_05825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381306.1"
                     /translation="MSGTLEIDSVYTAYDKADVLQGVSLKVEGGTITCLLGSNGSGKT
                     TLVRSILGLTPPRAGRIVFDGTDITHLPTHRIIAAGIACIPEGRKVFPKLTVEENLRV
                     GGYQERSDKVTSTRLAEILQVFPRLAERRRQLAGTMSGGEQAMVSIGRGLMCAPKLLL
                     IDEPSLGLSPRLVKENFNIIRRISERGITVLLVEQNVHQTLAISHHGFVLSKGRVAAS
                     GTPAELASRQDVREAYFG"
     gene            complement(1528..2301)
                     /locus_tag="VIY07_05830"
     CDS             complement(1528..2301)
                     /locus_tag="VIY07_05830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381307.1"
                     /translation="MTALLEAHGLSKHFGGVLALDGLDLTVTPNEILGLIGPNGSGKT
                     TFFNVITGIYRADAGQVIFDGANMTNASGRAVYLAGMSRTFQRSRLSLPLSIFDNIMI
                     GNHKRLNQGLWFNLVARRAFKHEFEESYAAARALVEVFEPALADRMFEPVAGLPMIDR
                     RRIEICRALISSPKLLLLDEPSAGMTHDETAELMNDILLVRARNQNLTIIIVEHEMGV
                     IERITNRCVVLNFGRKIAEGPYRTVAANPQVQEAYLGAA"
     gene            complement(2298..>2963)
                     /locus_tag="VIY07_05835"
     CDS             complement(2298..>2963)
                     /locus_tag="VIY07_05835"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381308.1"
                     /translation="PVLRTRGHYAAVVTIAFALLFKTFLEVNDVLGGPQGMQVKGMKI
                     LGWSFNDNIKFAGVSLSFYMNYFVVSLLLLVGAFVLVRRLERSWIGLNLDALRLDETA
                     ANCFGLDVVRWKITAFLIGNFLIGVAGALFGMVGGFVAPNNYTFADSLILVSILLLGG
                     IGNPWGLVVATIIVVVVPEKLQTIQEYRFLLYALLVIAVLLFRPEGLLPRPVRRYFPG
                     WRP"
BASE COUNT          611 a          895 c          918 g          539 t
ORIGIN      
        1 tccgagataa ctcgcgagct gatcacgaat tttcgcgtgg ctttgtcctg ggattgtgcg
       61 gatgtcgatg ccgatcgcgg cgcggtccgg cactgaattg atgttgagcc ctccatgaat
      121 cgtaccgacg ttgagagtcg gtccgccaag gacatcgtgc cgcgcgaaat tgaaatcgaa
      181 atcctgcagg gccgtgatgg cgcgccgcct tgtgaaccgc gttgacgcct ttttcgggca
      241 ttgagccgtg cgcggtgata ccggtcgtga ccgcttcaag ccatagcgct cccttgtggc
      301 caaccagcgc atggttgccg gttggctccg ccacgacaag cgcgccgacc tgaggaagcg
      361 gcgtcctggt tcgggccggt ccgcggcacc cgtgcagcct gtttcctcgc cggcggtgat
      421 gagcagaacc acgccggccg tgcccgccag cttgtcagcc aatgcgacgc atgcggctac
      481 gaacgcggcc acgccgcttt tcatgtcgga tgagccgcgc ccatacagct tgccgtcaag
      541 gatctcggca gcgaacgggt cgaccgacca aggctgtgcg ccgagcggca ccgtatcgag
      601 atgcccggta aagccgagcg gcggcttgcc tgcagcgcca ccgatgcggg cgaccagttg
      661 tgcccgtcca tttccgaaag gcacgacgtc caccgcaaat cccgcgcctt caagcaggga
      721 agccagccgc tcggcgcaag cgcgctcgtc cccgggcggg ttgatggtcc tgaaacggac
      781 gagatcctgg gtcagtgcga ctgaggcctg catggtttta tccaaagtat gcttcgcgca
      841 cgtcctggcg cgatgcaagc tccgctggcg tgccgcttgc cgccacgcga cctttcgaaa
      901 gcacgaagcc atgatgggaa atggcgagtg tctggtgcac gttctgctcg acgagaagca
      961 cggtgatccc gcgctcgctg atgcggcgaa tgatattgaa attttccttc accaggcgcg
     1021 gcgacagccc aagcgagggc tcatcgatca acagcagctt tggtgcacac atcaggccgc
     1081 ggccgatcga gaccatcgct tgctctccgc cggacatcgt tccggcaagc tgcctgcgcc
     1141 gctcggcgag gcgcgggaaa acctgcagga tctcggccag gcgcgtcgag gtgaccttgt
     1201 ccgagcgctc ctggtagccg ccgacccgaa ggttttcctc caccgtgagc ttgggaaaaa
     1261 ccttgcgccc ctcgggaatg caggcgatgc cggctgcgat gatcctgtgc gtcggcaggt
     1321 gcgtgatgtc ggtgccgtcg aatacgatgc ggccggcgcg cggaggcgtc aatccgagaa
     1381 tcgagcgtac caaggtcgtc ttgcccgagc cattggaacc aagcaagcaa gtgatagtgc
     1441 cgccctccac cttgagcgac acgccttgca gcacgtcggc cttgtcatag gccgtgtata
     1501 cgctatcgat ctcgagcgtg ccgctcatca tgctgctccg agataggctt cctgcacctg
     1561 cggattggcc gcaacggtac gataggggcc ttcggcgatc ttgcggccga aattgagaac
     1621 gacgcacctg ttggtgatgc gctcgatcac gcccatttca tgttcgacga taatgatcgt
     1681 gagattctgg ttgcgcgcgc ggacaagcag gatgtcgttc atcagctccg cggtctcgtc
     1741 gtgcgtcatg ccggccgaag gctcgtcgag cagcagcagc ttgggcgaac tgatgagggc
     1801 gcggcagatc tcgatgcgac ggcggtcgat catgggcagg ccggcgaccg gctcgaacat
     1861 gcgatcagcc agcgcaggct cgaaaacctc gacgagcgcg cgcgccgctg cgtagctttc
     1921 ctcgaactca tgcttgaaag cgcgtcgcgc caccagattg aaccaaagcc cctgatttag
     1981 acgcttgtga tttccgatca tgatgttgtc gaagatcgat agcggcagcg aaaggcggga
     2041 gcgctgaaac gttcgcgaca tgccggcgag gtaaaccgcc cggccgctcg catttgtcat
     2101 gttagcccca tcgaagatga cctgcccggc atcggcgcgg tagatgccgg taatgacatt
     2161 gaagaacgtg gtcttgccgg agccgttcgg accgatcagc ccgagaattt cgttcggggt
     2221 caccgtcagg tcgaggccgt caagcgccag gacgccgccg aaatgcttgg ataagccatg
     2281 cgcctcgagc agtgcggtca tggccgccac ccggggaaat agcggcgcac gggtcgcggc
     2341 aggagcccct ccggccggaa cagcaataca gcgatgacca acaacgcgta gagcaggaag
     2401 cgatattcct ggatggtttg cagcttctcg ggcacgacca caacgatgat cgtcgctaca
     2461 accaggcccc agggatttcc gatgccacca agaagcagga tggaaaccag aatgagcgaa
     2521 tcggcgaagg tatagttatt gggcgcgaca aatcctccga ccatgccaaa cagcgcaccc
     2581 gcgacaccga taaggaaatt gccgatgaga aacgcggtaa tcttccagcg cacgacatcg
     2641 agcccaaagc aattcgctgc cgtttcatcg agccgcaagg catcgagatt gaggccgatc
     2701 catgagcgtt cgagccgccg cacgagtaca aaggcgccga cgagcagcag caggctgaca
     2761 acaaaatagt tcatgtagaa agagagcgag acgccggcga atttgatgtt gtcgttgaat
     2821 gaccagccaa gaatcttcat gcctttcact tgcatgccct gtggcccgcc aagcacgtca
     2881 ttgacttcga gaaatgtctt gaacagcaag gcaaatgcaa ttgtgacaac ggcagcatag
     2941 tgtccgcgcg tgcgcagcac cgg
//
LOCUS       DATDHO010000308         1602 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_311567, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000308 DATDHO010000000
VERSION     DATDHO010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_311567"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VIY07_05840"
     CDS             <1..537
                     /locus_tag="VIY07_05840"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6381309.1"
                     /translation="NIVYPISQLIWMIAHPENGQPNDTQLDRAAALGIGYHLTFSGVR
                     NGQTGPRFRSTMESGVRMCLASDAMNVAPYAPFQNLWYVTTGQTLLPGVPGVPVAQRL
                     TREEALRHATVECAWFLGQEGKLGSLEAGKHADLIVLSDDYFAVADNAIKDVRSVLTV
                     VAGRIVYADAEYTGLEQN"
     gene            complement(792..>1602)
                     /locus_tag="VIY07_05845"
     CDS             complement(792..>1602)
                     /locus_tag="VIY07_05845"
                     /inference="COORDINATES: protein motif:HMM:NF012385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HEY6381310.1"
                     /translation="TINCAAIPAALMESEFFGHEKGAFTGATQKREGRFALADHGTIF
                     LDEIAELSLDLQAKLLRVLQEGEFAPVGSSQTKKVDVRVIAATNRDLNQTVRDGNFRE
                     DLYYRLNVFPIEVPPLKQRSDDVILLATAFAAKFAQRLGRKIEPLSDEYKRRLLAYSW
                     PGNVRELQNVIERAVITARDGRLNLDRALPDTGGETIPEKPPAEETTPESSKRILRIR
                     DLQQLERENILRALESTAWRVAGKDGAAALLGMNPSTLNSRIRALRIQRPK"
BASE COUNT          325 a          461 c          479 g          337 t
ORIGIN      
        1 aacatcgtgt atccaatctc ccagttgatc tggatgatcg cacaccccga aaacggtcag
       61 ccaaacgaca cgcagcttga tcgcgcagcg gccctaggga tcggttacca cttgacattc
      121 tcgggggtga ggaacgggca aacgggtccg cggtttcgta gcacgatgga gagcggcgta
      181 cgcatgtgcc tggcctcgga tgcgatgaac gtcgcgccgt atgcaccgtt ccaaaacctg
      241 tggtacgtca cgaccggcca aacgcttctt ccgggtgtgc caggagtacc cgtggcccag
      301 cggctcacgc gtgaagaggc gcttcgacac gccactgtcg agtgcgcttg gttcctcggc
      361 caagagggca aactggggtc gctagaagcc ggcaagcacg ccgacctcat cgtgctaagc
      421 gatgactact tcgccgtggc ggacaatgcg atcaaggacg tccgctccgt acttacggtc
      481 gttgccggcc gcattgtcta cgccgacgcg gagtataccg gcctggaaca gaactaaaag
      541 acactgactg acgccggctc tcgcgggcag cagagagccg gcgtcttcga gattgcaaca
      601 gaaccgaagt ctaggcgctt tctttgcccg atgaaccgcc gaatttcagt cgcagtgtgt
      661 cggaaatgat cggcagcatt tagagaaccc tagacgttcg caaaggtcta actaattgaa
      721 cgacgcttgg gggacaatcc gacaactggc aggctcgcgc gtaaccctag aattgttggg
      781 gatgagtaaa tttactttgg acgctggatg cgcagggctc tgatgcggga gttgagcgtc
      841 gagggattca tgccgagcag cgcggcggcg ccgtctttgc ccgccacgcg ccaggccgtg
      901 gattccaggg cccgcaggat attttcccgc tcgagctgtt ggagatcgcg aattcgaaga
      961 atgcgttttg acgattccgg cgttgtctcc tcggctggag gcttttccgg aattgtctcc
     1021 ccgccggtat ccggtagagc acggtccaaa ttgagtcggc cgtcccgggc ggtaatgacc
     1081 gcgcgctcga tgacgttttg cagctcgcgc acgttgcccg gccatgaata agccaggagc
     1141 cgtcgcttgt attcgtcgga taacggctcg atctttcgcc ccaaccgttg ggcgaacttg
     1201 gcggcgaagg cggtggcgag cagaatgaca tcatcgctcc gctgctttaa gggcggcact
     1261 tcgatgggga aaacgttcaa tcgataatag agatcttctc tgaagttccc gtctcttaca
     1321 gtttggttga ggtcgcggtt cgtcgcggcg atcacgcgaa cgtccacttt tttcgtctgg
     1381 gagcttccaa cgggtgcgaa ctcgccctcc tgcagcacgc gcaaaagttt ggcttgcagg
     1441 tcgagggaca attccgcaat ctcgtcgaga aaaatggttc catgatccgc cagcgcaaag
     1501 cgcccctccc gcttttgcgt cgccccggta aaagcgccct tttcatgtcc gaaaaattcg
     1561 ctctccatta gcgcagccgg gatcgccgca cagttgatcg tg
//
LOCUS       DATDHO010000309         2152 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_410968, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000309 DATDHO010000000
VERSION     DATDHO010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2152)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2152)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2152
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410968"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..845
                     /locus_tag="VIY07_05850"
     CDS             <1..845
                     /locus_tag="VIY07_05850"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEY6381311.1"
                     /translation="TAFWANVYRHARRHGYRRSIKPSPMNRHVINDKSQVQVIARAAT
                     ILRALEEENAGLSLGQIAQKVNLARSTVQRIVAALETEKLVIAATPNGRVRLGPTILR
                     LAASVRSDFIALARPFLERLSEELHETVDLSTVKKNHLVFIDQVIGSQRLRAVSAVGD
                     TFPLYCTANGKAYLAQLTDDAIEALIGRAYEARTPHTLTRLDALLGDLKTARKSGVAY
                     DREEHTLGICAAGVALHDPLGNAVAISVPVPTQRFKEHQALIAELLVATKNALENHMT
                     SAAA"
     gene            888..1730
                     /locus_tag="VIY07_05855"
     CDS             888..1730
                     /locus_tag="VIY07_05855"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY6381312.1"
                     /translation="MGKRIRGVMLEENLRNSMGLEFYNLSHRFGYQSPNWPYFEDVKI
                     ERIHYMAKSGVLSQRITTSMHNTTHIDAPAHVVQGTPFIDEVPLPHFFGSGIVVSIPK
                     NKWEPITGDDLEAACGKIVQPRDVLIVNTGWHKFYEDSEDYFCRAPGFVPSAGEWFVE
                     KKVKVVGHDTQANDHPLATAIGPQRNGPLHPHLAEEYREWSGGRDWKDDFPEWEPVHR
                     ILFKNGILGIENVGGDIDKVTGKRCTFAYFPWNWERGDGCIVRLVAIVDPSGKYRIER
                     GKKF"
     gene            1786..2130
                     /locus_tag="VIY07_05860"
     CDS             1786..2130
                     /locus_tag="VIY07_05860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6381313.1"
                     /translation="MHVKRFSDAKPYDAPNHRNYTSLRLFGAEAGGTKGLVFGYSHFL
                     PGGGAGPDASPPEKVYFVLRGELTVIVDGKETVLKANDSCVIEPNETREIVNRGNEVC
                     SIVVAVANPPAK"
BASE COUNT          467 a          649 c          627 g          409 t
ORIGIN      
        1 gtaccgcatt ttgggctaac gtgtaccgac atgcaaggcg ccatggatac cgccggagca
       61 tcaagccgtc gccaatgaac cgccacgtca tcaacgacaa aagccaggtc caggtcatcg
      121 cgcgtgcggc caccattctg cgcgcactcg aagaggagaa tgccgggctc agcctcggcc
      181 agatcgcgca aaaggtgaat ctcgcgcggt ccacggtgca gcgcattgtc gcggcactcg
      241 agaccgaaaa gcttgtcatt gcagcaacgc cgaacgggcg cgtacggctc ggacccacga
      301 ttcttcgact tgctgcctcg gtgcgcagcg atttcatcgc actggcgcgt ccttttctcg
      361 agcggctttc cgaggagctg catgagaccg tcgatctatc gacagtgaag aaaaatcatc
      421 tcgtttttat cgatcaggtc atcgggtcgc agcgcttgcg tgccgtctcc gcggtcgggg
      481 acacctttcc gctctactgc accgcgaacg ggaaagccta tctggcgcag cttaccgatg
      541 acgccatcga ggctctcatc ggccgcgctt acgaagcgcg cacgccgcac acgctcacac
      601 gactggatgc gctcctcggc gatctcaaga ccgcgcgaaa aagcggcgtc gcctatgacc
      661 gtgaagaaca cacgctcgga atttgcgcgg ctggagttgc gttgcacgat ccgcttggta
      721 acgcggtcgc tatatccgtg ccggtgccga ctcagcgatt caaggagcat caggcactga
      781 tcgccgagct gctggtcgca accaaaaacg cattggagaa ccatatgact tcagccgccg
      841 cctgaggccg ggcagcggat caccaggcgc gaacaaggga ggatgccgtg ggcaaaagaa
      901 ttcgcggcgt gatgctcgaa gagaacctca ggaattccat gggactcgag ttttataact
      961 tgtcccaccg ttttggctac cagtcgccga actggcccta tttcgaagac gtcaaaattg
     1021 agcgcatcca ctacatggcc aagtcgggcg tgctctcaca gcgcatcacg acatcgatgc
     1081 acaatacgac ccacatcgac gcgcccgcac atgtggtgca aggcacgcca tttatcgacg
     1141 aagtgcccct gccgcatttc ttcggctcgg gcatcgtggt ttcgattcca aaaaacaagt
     1201 gggaaccgat caccggagac gacctcgagg ctgcctgcgg caagatcgtg cagccccgcg
     1261 atgtccttat cgtcaatacc ggctggcaca agttctacga agacagcgaa gattacttct
     1321 gccgtgcgcc cggctttgtt ccctcggccg gggaatggtt cgtggagaag aaggtcaagg
     1381 tggtcggcca cgacacgcag gccaatgatc acccgctcgc aaccgccatc ggccctcagc
     1441 gcaacgggcc tttgcacccg catctcgccg aggaataccg cgagtggtcg gggggacggg
     1501 actggaaaga cgatttcccc gaatgggagc ccgtccatcg catcctgttc aagaacggca
     1561 ttctcggcat cgagaatgtc ggcggcgaca tcgacaaggt gaccggcaaa cgctgcacgt
     1621 tcgcttactt tccgtggaat tgggagcgcg gcgacggttg cattgtgcgc ctggttgcta
     1681 ttgtcgatcc aagcgggaaa taccgcatcg agcgcgggaa gaaattctag cgcttcgaaa
     1741 cgcgcaacaa caaagtcgtg gagttgatcc agggaggagc ttcgaatgca cgtcaaacgt
     1801 ttttccgacg ccaagcccta cgatgcgccc aatcaccgca attacacatc gttgcgtctg
     1861 ttcggagccg aagcgggcgg caccaaaggg ctcgtgttcg gttattcgca ctttctgccg
     1921 gggggtggcg cggggccgga cgcctctccg ccggaaaagg tctatttcgt gctgcgcggc
     1981 gagctgaccg tcatcgtcga tggcaaggaa accgttctca aggccaacga ctcctgcgtc
     2041 atcgagccca atgaaacgcg cgagatcgtc aatcgcggca acgaagtttg ctcgattgtg
     2101 gttgcagtcg ccaatccgcc ggcgaaatga tttcacgacg tcatcctgag gt
//
LOCUS       DATDHO010000310         2189 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_360666, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000310 DATDHO010000000
VERSION     DATDHO010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2189
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360666"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1599
                     /gene="acnA"
                     /locus_tag="VIY07_05865"
     CDS             <1..1599
                     /gene="acnA"
                     /locus_tag="VIY07_05865"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007067244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEY6381314.1"
                     /translation="VPLREVGKNFHDSLPTLMKAKPTAPIAPPPDVRNHWEAEGGHTF
                     GGGAAVAAPPERTQGGLSHGSVVIAAITSCTNTSNPSVMLGAGLLAQKAVEAGLSRRP
                     WVKTSLAPGSQVVGEYLGKSGLQKDLDKLGFNLVGFGCTTCIGNSGPLPPENSKAIND
                     NDLVAAAVLSGNRNFEGRVNADVRANYLASPPLVVSYAIAGSMNVDIARDPLGTDQKG
                     KKIFLKDIWPSNKEIGDFVAKNITRQMFSKKYADVFKGDSNWRKISVKGGVTYDWDKK
                     STYVQNPPYFVGMGRYPKQLEDIVDARVLALLLDSITTDHISPAGSIKVDSPAGKYLV
                     EHKVKPADFNQYGTRRGNHQVMMRGTFANIRIKNQMVPGVEGGVTIHHPSKQRMPIYD
                     AAMKYEAGGVPLVVFAGKEYGSGSSRDWAAKGSVLLGIRAVVAQSFERIHRSNLVGMG
                     VMPLVFEEGTSWQSLGLKGDEQVTIRGLHGELKPHQRLIAEIVSGNGTLKRVPLLCRI
                     DTLDELDYFKNGGILRYVLRQLAG"
     gene            1713..>2189
                     /locus_tag="VIY07_05870"
     CDS             1713..>2189
                     /locus_tag="VIY07_05870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HEY6381315.1"
                     /translation="MNYRHITFAFAFICSTTAASATEPRAVIELFTSQGCSSCPAADK
                     LLGELSRDPSLVTMSLAVDYWDYLGWKDTLALHGHSVRQRAYAEARGDREVYTPQVVV
                     NGAVHVLGSDKAAIEKAIMQTRRNSAVLALPVQMNVADGKVTVNVPAAQGEYRSGEV"
BASE COUNT          453 a          635 c          679 g          422 t
ORIGIN      
        1 gtgccgctgc gcgaggtcgg gaagaacttc cacgactcgc tcccgaccct catgaaagca
       61 aagccgacgg cgccgatcgc gccgccgccc gacgtacgta accattggga ggccgaaggc
      121 gggcacacgt tcggcggcgg cgcggccgta gccgcgcccc cagaacggac gcaaggaggc
      181 ctgagccacg gctcggtggt catcgccgcg atcacgagct gcaccaacac gtcgaacccg
      241 tcggtgatgc ttggggccgg gctgctggcg cagaaggccg tcgaggccgg gctgagccgg
      301 cgcccgtggg tcaagacctc gcttgcgccc ggctcgcagg tcgttggcga gtatctcggc
      361 aagtccggcc tgcaaaagga tctcgacaag cttggcttca atctcgtcgg cttcggctgc
      421 acgacgtgca tcgggaattc gggtccactt ccgccggaga attcaaaggc gatcaatgac
      481 aatgaccttg tggcggcagc cgtgctgtcc ggcaatcgca atttcgaagg ccgcgtcaat
      541 gccgatgtgc gcgccaacta cctcgcttct ccgccgttgg tcgtctctta tgcgatagcg
      601 ggctcgatga atgtcgatat tgcgcgggat ccgctcggca ccgaccagaa gggcaaaaaa
      661 atattcctca aggacatctg gccatcaaac aaggagatcg gagacttcgt tgcgaaaaac
      721 atcacccgcc agatgttctc aaagaaatac gccgatgtgt tcaagggcga ctccaactgg
      781 cgaaaaatca gtgtgaaagg cggagtgacg tacgattggg acaagaaatc tacctacgtg
      841 cagaacccac cgtacttcgt cggaatgggg cgctatccca agcagctcga agatatcgtc
      901 gatgcgcggg tactcgcttt gctcctcgat tcaatcacga ccgaccacat ttcacccgcc
      961 ggttcaatca aggttgattc gccagccggc aaatatcttg tcgaacacaa ggtgaagcct
     1021 gctgacttca atcagtacgg cacgcgtcgt ggcaaccacc aagtgatgat gcgcggcacc
     1081 ttcgccaata tccgtatcaa gaaccagatg gtgccgggcg tcgaaggtgg cgtcaccatc
     1141 catcatccgt cgaagcagcg catgccgatc tatgacgcgg cgatgaagta tgaggccggc
     1201 ggagttcctt tggttgtttt cgcggggaaa gaatacggca gcggctcttc gcgcgactgg
     1261 gcagccaaag gttctgttct gctgggaatc cgcgccgtgg ttgcgcagtc tttcgagcgc
     1321 attcaccgtt ccaatctcgt cggcatgggc gtgatgccct tggtattcga agaaggaact
     1381 tcctggcaat cgcttgggct caagggcgac gagcaggtca caatccgggg attgcacggc
     1441 gagctcaagc ctcaccaacg tttgatcgcc gagatcgtgt cgggtaatgg caccctcaag
     1501 cgggtccccc tgctctgccg catcgatact ttggacgagc tggattactt caagaacggc
     1561 ggcattttgc ggtacgtcct gcgtcaattg gctggttagt cggcgccgcc cactggtggt
     1621 gggcaggagg gggcactcac cgcgaagtga gtggcgggtg atcgagagag cgatctataa
     1681 atcgcgggcg aggcaaggat tgcggtaacg atatgaacta tcgccacatc acctttgcgt
     1741 tcgcgttcat ttgcagcacg actgcagcgt cggccaccga gccacgtgcg gttatcgaac
     1801 tgttcacaag tcagggctgt tcgtcttgtc cggccgccga caagctgctc ggcgagctgt
     1861 cgcgcgaccc ttcgctggtg accatgagtc tcgcggttga ctactgggat taccttggct
     1921 ggaaggacac cctggcgctg cacgggcatt ccgttcggca acgcgcatat gccgaagctc
     1981 gcggcgaccg cgaggtctat acgccgcagg tcgtcgtgaa tggcgccgtg catgtgctcg
     2041 gaagcgacaa ggccgcgatt gaaaaagcca tcatgcaaac gcggcgcaat tctgcggtgc
     2101 tcgcgttgcc cgtgcaaatg aacgtggccg acgggaaggt aacagtgaat gtgcctgctg
     2161 cccagggcga gtaccgcagc ggggaggtt
//
LOCUS       DATDHO010000311         3062 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_212739, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000311 DATDHO010000000
VERSION     DATDHO010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3062
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212739"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            25..1005
                     /locus_tag="VIY07_05875"
     CDS             25..1005
                     /locus_tag="VIY07_05875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6381316.1"
                     /translation="MIAAGTAVAAMTLAGAPAMAWEPSKPVEIVVAAGAGGASDQMAR
                     MIQATVQKHNLMKQPMVVSLKGGASGGEALMYMKSSEGDSNKVLIAYSLIYMLPLSAK
                     IPFNWRELTPVSVIAMDQFVLWDNTTLPYKNVKEFIDAAKASSTPFKMGGTGSKREDH
                     VLTVFMEKKTGAKFAYLPYKSGGEAATQLVGNHTASNVNNPSENLEVWRAGQVRALCV
                     FDKERISYKAKVTDTQSWNDVPTCKEEGLDVQYLMLRAMFLPGKVTPEQTAFYVDLFK
                     KVSETPEYKDYMEKQALKPIFLTGKDMVKFLEEDDKLNSSLMQEAGFVAQ"
     gene            1133..1672
                     /locus_tag="VIY07_05880"
     CDS             1133..1672
                     /locus_tag="VIY07_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY6381317.1"
                     /translation="MSSDQEIIVEDPDAPVEESPAVAGVRTVETVVYLLLMALALLLA
                     FDNWRTGMGWASDGPQAGYFPFYLSVILVAACVYGLASIFVSRLDEGKVFVTRDQLRR
                     VMQVFVPTFLFCLFVQWLGIYVASFLLIAGFMWMVGRIALWKSLLTSFVFSMAMFITF
                     DIAFDVIMPKGPLEALFGF"
     gene            1677..>3062
                     /locus_tag="VIY07_05885"
     CDS             1677..>3062
                     /locus_tag="VIY07_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY6381318.1"
                     /translation="MEAFGLLLDGFAVLLTWKTLTLMMVGLVLGIFVGVLPGLGGPNG
                     VAILLPLTFTMDPTSAIVMLSCIYWGALFGGAITSILFNIPGEAWSVATTFDGYPMAQ
                     QGRAAEALTAAFTSSFVGSLFAVLLITFLAPGIASFALRFGPPEFFSVYLLTFCSFVG
                     LGREAKHKTIISMALGLLLAGVGMDTVSGQLRMTFGYSDLLRGINFLVAVIGLFGISE
                     ILLTMEERLALRGHAARISLRVLWNVWKDLPRYWITLLRSSAIGAWLGITPGGAIAAS
                     FMGYNLAKRFSKDPESFGKGRIEGVFAPETAAHASGTAALLPMLALGIPGSGTAAILL
                     GGLMVWGLNPGPLLFVEHKDFVWGLIASMYLGNIVGLVIVLTTVPAFAAVLRVPFAAI
                     APMIVVSCAIGAYAIQNAMFDIWLMLLFGVVGYVFKKLDYPLAPLVLALVLGDKAEDS
                     FRQAMLVSQGDV"
BASE COUNT          549 a          881 c          938 g          694 t
ORIGIN      
        1 cttagggagg atgcgatgaa aaacatgatt gcggccggca cggccgttgc ggccatgacg
       61 ctggctggcg cgccggcgat ggcatgggaa ccaagcaagc cggttgaaat cgtcgtggct
      121 gcgggtgcgg gcggcgcttc cgatcagatg gcgcgcatga ttcaggccac cgtccagaag
      181 cacaacttga tgaagcagcc gatggtggtg tcgctcaagg gcggtgcctc cggtggcgaa
      241 gctctgatgt acatgaagtc gagcgagggc gattccaaca aggtgctgat tgcctattcg
      301 ctgatctaca tgctgccgct gtccgccaag attccgttca actggcgcga gctcacgccg
      361 gtttcggtga tcgcgatgga tcagttcgtt ctttgggaca acaccacact gccgtataaa
      421 aatgtaaagg agttcattga cgctgcgaaa gcgtcttcga cgccattcaa gatgggtggc
      481 accggctcca agcgcgagga ccatgtcctc accgtgttca tggagaagaa gaccggcgcg
      541 aagttcgcct atctgccgta caagtcgggt ggcgaggcgg cgacgcagct ggtcggaaat
      601 cacacggcgt cgaatgtgaa caatccgtcg gaaaatcttg aagtatggcg tgccggccag
      661 gttcgcgcgc tatgcgtgtt cgataaagaa cgcatctcgt acaaggcaaa ggtgaccgac
      721 acgcaatcgt ggaatgacgt gccgacatgc aaggaggaag gtctcgacgt gcaatatctg
      781 atgttgcgcg ccatgttctt gcccgggaag gttacgcccg agcagactgc cttttacgtc
      841 gacctgttca agaaggtttc cgagacgccg gaatacaaag actacatgga aaaacaggcg
      901 ctcaagccca tcttcctgac cggcaaggac atggtcaaat ttctcgagga agacgacaag
      961 ttgaactcga gcctgatgca agaagccggc ttcgtcgcgc agtaaaaaaa tactgattaa
     1021 tccgggccgg cacgcttgtg ccggacccgg aatccagatg ctcgcatcga cgtgtcgctc
     1081 tggattccgg aggcacgcgg ggcgcgtcct ggaatctcaa gataggtaag caatgtcctc
     1141 cgatcaggaa attattgttg aagatccgga tgccccggtc gaggaatcgc cggccgtcgc
     1201 tggagtgcgc accgtcgaaa cggtggtcta tctgctgctg atggctctcg cgcttctgct
     1261 ggcttttgac aactggcgca ccggcatggg atgggcttcc gacggtcccc aggccggata
     1321 ttttcccttc tacctctccg tcattttggt ggcagcctgc gtctatggac tggcctcaat
     1381 cttcgtaagc cgattggacg aaggcaaggt tttcgtcacc cgcgatcaat tgcgccgcgt
     1441 gatgcaggtg ttcgttccga cattcttgtt ttgtctgttc gtccagtggc tcggaatcta
     1501 cgtcgcaagc ttcctgctga tcgcaggctt catgtggatg gtcggtcgta tcgcgttgtg
     1561 gaaatcgctg ttgaccagct tcgtgttctc gatggccatg ttcatcactt tcgatatcgc
     1621 cttcgacgtg atcatgccga aggggccgct cgaagccctg tttggattct gaccccatgg
     1681 aagccttcgg cctgcttctt gacggatttg ccgtcctgct gacctggaaa acgctgaccc
     1741 tgatgatggt cggcctggtg ctcggcattt tcgtgggcgt gttgccgggt ctgggtggac
     1801 cgaatggcgt cgccatcctg ctgccgctta ccttcacgat ggaccccacc tcggccatcg
     1861 tcatgctgtc gtgcatctac tggggcgcgc tgtttggcgg ggcaatcacc tcgatcctgt
     1921 tcaatattcc cggcgaggcc tggtcagtcg cgaccacgtt cgacgggtat ccgatggcgc
     1981 agcagggacg cgcggcggaa gccctcacgg cggcgttcac gtcttcattc gtcggctcgc
     2041 ttttcgcggt gcttctcatc acctttcttg cgccagggat cgcctcgttc gcgctgcgat
     2101 ttgggccgcc cgagtttttc tccgtttatc tgctcacctt ctgttcgttc gtaggcctgg
     2161 gccgcgaagc gaaacacaaa accatcattt caatggcgct cggcctgctg ctcgccggcg
     2221 tcggaatgga tacggtatcc ggtcaactgc gaatgacctt cgggtacagc gacctgttac
     2281 gcggcatcaa ctttctcgtt gcggtcatcg ggctgttcgg catcagcgaa attctgctca
     2341 ccatggagga gcggctggcg ctccgcggcc acgcagcgcg catcagcctg cgcgtactgt
     2401 ggaacgtatg gaaagatttg ccacggtact ggataacgct gctgcggtct tcggccatcg
     2461 gtgcctggct cggcattacc cctggcgggg cgatcgccgc ctcgttcatg ggctacaacc
     2521 ttgccaagcg cttctcgaag gatccggaaa gtttcggcaa ggggcgcatc gaaggcgtat
     2581 tcgcgccgga gaccgcggcg catgcgtcgg gcacggcggc tctgctgccg atgctcgcgt
     2641 tgggcattcc cggttcgggc acggctgcca tcctccttgg cgggctgatg gtgtggggcc
     2701 tcaatcccgg gccgcttctg ttcgtcgagc acaaggattt cgtatggggc ctgatcgcct
     2761 cgatgtatct cggcaatatc gtcgggttgg tcatagtgct gaccacggtc cccgcattcg
     2821 ccgcggtgct gcgcgtgcca ttcgcagcca tcgcacccat gatcgtcgtg tcctgcgcga
     2881 tcggcgccta cgccatccag aacgccatgt tcgacatctg gctgatgctg ctgttcggcg
     2941 tcgtcggcta tgtcttcaag aagctcgact atccgctcgc gccgctggtg ctggcgctgg
     3001 tgctaggcga caaggccgag gactccttcc gccaggcgat gctggtctcg cagggcgacg
     3061 tg
//
LOCUS       DATDHO010000312         2235 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_360768, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000312 DATDHO010000000
VERSION     DATDHO010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2235
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_360768"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1713)
                     /locus_tag="VIY07_05890"
     CDS             complement(106..1713)
                     /locus_tag="VIY07_05890"
                     /inference="COORDINATES: protein motif:HMM:NF024842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY6381319.1"
                     /translation="MTETYDGIILGAGHNGMILQAYLGKAGLKVLAIERKAVTGGGLS
                     TLEDPRHPGFLHNTHAFFQRAITTMPWYADLELARYGAHYIEPELNVALLTKDGGMLG
                     WWTDIERTVESFERFSRKDAETVRRWQHEFVPIVNNILSWEAKAPPLPPEERRPLLER
                     SAAGRRLLEVSALSPLEFVQREFEHPTVQAGLLFFNGLREVDLRVRGFGHHIAALLAS
                     PAKAQMSRGGTAALARALEACVRETGGEFRLMTEPKRIVVEAGRAIGVETTDGNFVRA
                     RHFVVSSLNPHQTFLDLLDDTLVPTDIRAKVKAFRYNLLAPLFALHLNLREPPKYSAS
                     AEFPELAHALMVIMGLDHASQFDDIVRHHEAGTIPPTVMWGSCPTVFDPSQAPPGQHT
                     GFMWEKLPYRLKGNPHWSGNRGDKHGRLMLALWRQHAPNLANAVLDSFTRTPVDTERS
                     LPNMREGDLLVGAFTNGQIGHHRPFVGAGTYRGHLPGLYLCGSSSHPGGNITGLPGYN
                     AAQVILADLGIQTDWVPPPIADRLASV"
     gene            complement(1732..>2235)
                     /locus_tag="VIY07_05895"
     CDS             complement(1732..>2235)
                     /locus_tag="VIY07_05895"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381320.1"
                     /translation="PLLLKWRRVIDNVLLPVEILGLPMAESRSRARDLLQLVGLKGAE
                     DKFPYELSGGMQQRAAIARALIHDPKLILMDEPFGALDALTREKMNLELLRIWQEARK
                     TIVFVTHGITEAVFLGTRVVVLTAGPARMADNFRVELPHPRPLEIKTTEKFGEYSRRI
                     YRLLGME"
BASE COUNT          471 a          639 c          669 g          456 t
ORIGIN      
        1 aaccacactg cttcatttca aacaaatcat aaattcgcaa agccctgcac gcgacgaaat
       61 cggattcgca gaatgagaga ttacggaata attgatctgt ttacttcata cactcgccag
      121 ccgatctgcg atcggcggcg gtacccagtc cgtttggatg ccgagatcgg ccaagatgac
      181 ctgggccgcg ttatatccag gaagtccggt gatgttgccg ccaggatggc tgctcgaacc
      241 gcaaaggtag agtcctggca gatgcccgcg gtaagtgccg gccccgacaa aggggcgatg
      301 gtggccgatc tgtccgttgg taaaagcgcc gactaagaga tcgccctcgc gcatgttagg
      361 caacgaccgc tcggtatcca cgggcgtccg tgtaaatgaa tccagcacag cgttggcgag
      421 attgggcgca tgctgacgcc agagtgcgag cattaagcgg ccgtgtttgt cgcccctgtt
      481 tcctgaccag tgcggatttc ctttcaatcg atagggcagc ttctcccaca tgaagccagt
      541 gtgttgcccg ggcggcgcct ggctgggatc gaacactgtt gggcaggagc cccacattac
      601 agtaggggga atcgtgccgg cctcgtgatg gcggacgatg tcgtcgaact ggcttgcgtg
      661 atcgagtccc atgatcacca tcagagcatg cgccaattcg ggaaattcag cacttgcgga
      721 gtatttcggg ggctcgcgta gattgagatg aagcgcgaac agcggtgcta gcaggttgta
      781 acggaaggcc ttcaccttgg cacgaatgtc ggtgggcact agcgtgtcat cgagcagatc
      841 gaggaaggtc tgatgcggat taagcgagga cacgacgaag tgccgcgccc ggacaaaatt
      901 gccgtccgtg gtctcaacgc cgatggcgcg accggcttcc acgacgatgc gcttaggctc
      961 ggtcatcagg cggaactcgc cgccggtctc acgcacgcaa gcctctaatg cgcgggcaag
     1021 cgccgccgtg cccccgcgtg acatctgcgc tttcgctggg ctggccagga gcgctgcaat
     1081 gtggtggccg aagccgcgga cgcgaagatc aacttcacgc aggccgttga agaacaaaag
     1141 gccggcctgc acggttggat gctcgaactc ccgttgcaca aattcaagcg gtgatagcgc
     1201 gctgacttca agcaagcggc ggccggcggc gcttcgttcc aacagcggac gtcgctcctc
     1261 cggcggcaat ggaggagctt tggcttccca gctcaggata ttgttgacga tgggaacaaa
     1321 ctcatgctgc cagcggcgta ccgtttcagc gtcctttcgg ctgaatcgct cgaacgattc
     1381 tacggtacgt tcgatgtccg tccaccaacc gagcataccc ccatctttgg tcagcaacgc
     1441 tacatttaat tcgggctcga tgtagtgcgc accataccgc gccagttcca aatcggcgta
     1501 ccacggcatc gtagtgatag cgcgctgaaa gaatgcatgg gtattgtgaa gaaagccggg
     1561 atggcgcggg tcttcgagtg tcgaaagacc gccgccggtc accgccttgc gctcgatcgc
     1621 tagaaccttc agtccagcct ttccgaggta ggcttgaagg atcattccat tgtggccggc
     1681 accaaggatg atgccgtcat aggtctccgt catccgttgc cccgagcctg actattccat
     1741 gccgagcaag cgatagattc ggcggctgta ttcgccgaat ttctcagttg tcttgatctc
     1801 gagtggacga ggatgtggca gttcaacgcg gaaattgtct gccatgcgag cggggccggc
     1861 ggtgagcacg accacgcgtg taccgaggaa taccgcctcg gtgatgccat gggtaacgaa
     1921 gacaatggtt ttgcgggctt cctgccagat ccgcagcaat tcgagattca ttttctcacg
     1981 ggtcagcgca tcaagcgcgc cgaacggctc atccatcaga atgagcttgg gatcatggat
     2041 cagtgcgcgg gcaatggcag cccgctgctg catccccccc gatagctcat agggaaactt
     2101 gtcttctgct cccttgaggc cgaccagttg cagcaaatcg cgtgcgcgcg accgactttc
     2161 ggccatcggc aatccgagga tttccactgg cagcagcacg ttgtcgatca cgcgccgcca
     2221 cttcaacagt aacgg
//
LOCUS       DATDHO010000313         2473 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_14798, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000313 DATDHO010000000
VERSION     DATDHO010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_14798"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1240
                     /gene="kdpB"
                     /locus_tag="VIY07_05900"
     CDS             <1..1240
                     /gene="kdpB"
                     /locus_tag="VIY07_05900"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006469031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HEY6381321.1"
                     /translation="LSAIGIAGIDRLLRKNVLAMSGRAVEAAGDVDTLLLDKTGTITL
                     GNRMATEFIPIDGVGAEALADAAQLASLADETPEGRSIVVLAKEKYRLRGRDVTEIGA
                     RFIPFSAETRMSGCDLDGRKIRKGAADAIVAYVHELGGTVSSQVEGVTHGISDSGGTP
                     LVVAEGNRILGIIHLKDVVKGGISERFERFRAMGIRTVMITGDNPRTAAAIAREAGVD
                     DFLAQATPEAKMRLIREEQAKGKLVAMTGDGTNDAPALAQADVGVAMNTGTQAAKEAG
                     NMVDLDSNPTKLLEVVEIGKQMLMTRGVLTTFSIANDVAKYFAIIPAMFMSVYPEIAP
                     LNVMRLASPQSAILSAVIFNAIIIILLIPLALRGVRYRPIGAGPLLARSLLIYGVGGV
                     IAPFIGIKLIDLALEAFGLI"
     gene            1251..1868
                     /gene="kdpC"
                     /locus_tag="VIY07_05905"
     CDS             1251..1868
                     /gene="kdpC"
                     /locus_tag="VIY07_05905"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF001454.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HEY6381322.1"
                     /translation="MKSVLGVAVRTTIVTLVLTGLIYPFVMTGLAQILFPWRANGSLV
                     TDEKGQVVGSELIAQGFANPAYFQPRPSAAGEKGYDAAASSGSNLGPTSKKLRDRITE
                     DVKRLKEENPEASDAMPADLVTASGSGLDPHLSPQAVLWQAPRVAKARGITAERVKAV
                     VSSNVEGRTFGILGEPRVNVLLVNLALDRQFGRPAPLPIQQKKDG"
     gene            1916..>2473
                     /locus_tag="VIY07_05910"
     CDS             1916..>2473
                     /locus_tag="VIY07_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HEY6381323.1"
                     /translation="MVERAKRGRLKVYIGSAAGVGKTYQMLEEAHALKMRGVDVVLAF
                     IEPHGRLDTIALIEGLEVVLRQRVEYRGVMVEEMDLDAVLKRSPQVAIVDELAHTNAP
                     FCRNKKRYQDVLELLDAGINVICAFNVQHLESLNDMVKQATSVVVRETVPDSILKRAD
                     QVVDIDLAVEDLIDRLRAGKIYAPDK"
BASE COUNT          539 a          641 c          772 g          521 t
ORIGIN      
        1 cctttccgcc atcggaatcg ccggcatcga ccgcctgctg aggaagaatg tccttgccat
       61 gagtggccgc gcggtcgaag cggcgggcga tgtcgataca ttgcttttgg acaagaccgg
      121 tacgatcacg ctcggcaacc gcatggcgac cgaatttatt cccatcgacg gtgtgggcgc
      181 cgaggcgctg gcggacgcag cgcaattggc gagcctcgcg gacgagacac ccgaaggccg
      241 atcgattgtc gttctcgcca aggagaaata caggctacgg gggcgggatg tgacggagat
      301 cggcgcccgc ttcattccct tcagcgcgga aacccggatg agcggctgcg atcttgacgg
      361 gcgcaaaatt cgcaagggtg ccgccgatgc gatcgtagcg tacgttcacg agttaggcgg
      421 cacggtcagt tctcaagtcg aaggcgtcac tcacgggatc tcggattccg gaggaacccc
      481 gctggtggtt gccgagggaa ataggatcct cggtattatc catcttaagg acgtggtcaa
      541 gggcggcatc agcgagcgtt tcgagcgctt tcgggccatg ggtattcgca cggtgatgat
      601 taccggagac aatccgcgca ctgccgcggc gatcgctagg gaagcgggtg tcgatgattt
      661 cctcgcgcaa gcgacgccgg aagcgaagat gcggctcatc agagaagagc aagcgaaggg
      721 caagctcgtg gcgatgaccg gcgatggcac caacgacgcc ccggcgctgg cgcaggcaga
      781 tgtcggcgtc gccatgaata ccggaactca agcagcaaaa gaggccggca acatggtcga
      841 tttagactcg aatccgacca agctcttgga agtggtcgaa atcggcaagc aaatgctcat
      901 gacgcgaggc gtactgacga ctttttcaat tgccaatgat gtagccaagt actttgcgat
      961 cattccggcc atgtttatga gtgtttaccc ggagatcgcg ccgctcaacg tgatgcgttt
     1021 ggcgtcgccc caaagcgcga tactttcggc agtcatcttc aatgcaatca tcatcatctt
     1081 gcttattccg ctggcgctgc gtggtgtgcg gtatcgtcct atcggcgctg gaccgttgct
     1141 ggcacgttcc ctgctgattt acggcgtcgg aggagtcatc gcgcctttta tcgggattaa
     1201 actgatcgat ctcgctttag aagcttttgg gcttatctga ggagacaaat atgaaaagcg
     1261 tattgggtgt agcggttaga acgacgattg tcactcttgt tcttacggga ctgatctatc
     1321 cttttgtgat gaccggactc gctcaaatct tatttccgtg gagagcgaac ggtagtctgg
     1381 tgacggacga gaagggacag gtggttggct cggagctcat cgcgcaggga ttcgcgaacc
     1441 cagcctactt tcagccccgg ccgtcggcgg caggtgagaa aggctatgac gccgcggctt
     1501 catccggatc caatctgggg ccaacctcga aaaagcttcg ggatcgtata actgaagatg
     1561 taaaacggct taaagaagag aatcctgaag catcagatgc catgcctgcc gacctggtaa
     1621 ccgcgtccgg cagtggactc gacccgcatc tttcacctca agctgtgctc tggcaggcgc
     1681 cgcgagttgc aaaagcacgc ggcatcaccg cggagcgtgt aaaagccgtc gtcagttcga
     1741 atgtggaagg gagaaccttc ggcatcttag gcgaacctcg agtcaatgtg ctgctggtga
     1801 atttggcact tgatcgccaa ttcggccggc cagctccgtt acccattcaa caaaagaaag
     1861 atggctgacc ttgctcatgg ccgtggaacg taagcgaccc gaagattttc tcgagttggt
     1921 cgagcgcgcg aaacgcggcc ggctgaaggt ttatattggc tcagcggccg gcgttggcaa
     1981 aacctaccag atgctggaag aggcacacgc gctgaaaatg cgcggtgttg atgtggtgtt
     2041 ggcattcatc gaaccgcacg gccggctcga tactatcgcg ctgatcgagg ggctggaggt
     2101 ggtgctgcgc cagcgggtcg agtatcgtgg cgtcatggtg gaagagatgg acctcgatgc
     2161 ggttctcaag aggagtcccc aggtggccat cgtcgatgag ctggcgcata ccaatgcacc
     2221 gttttgccgc aataagaaac gctaccagga cgttctggag ttgctcgacg ccggtatcaa
     2281 tgtgatctgc gcgtttaatg tgcagcatct tgagagcctc aacgatatgg tcaagcaggc
     2341 gaccagtgtc gtcgtgcgcg agactgtgcc ggattcgatc ctgaagcggg cagaccaagt
     2401 ggttgatatc gatttggcag ttgaagatct gatcgatcgg ctgcgggcag gaaagatcta
     2461 tgcgccggat aag
//
LOCUS       DATDHO010000314        15432 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_212820, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000314 DATDHO010000000
VERSION     DATDHO010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 15432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15432
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_212820"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..263)
                     /locus_tag="VIY07_05915"
     CDS             complement(<1..263)
                     /locus_tag="VIY07_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbQ family protein"
                     /protein_id="HEY6381324.1"
                     /translation="MSPIIEAKLELIASTTLHVQTQGTGFIDITSNAVNFIDQTGAGD
                     VILLVYLRHTSASLAIQENADPDVQTDLIAALDRLAPENAPWV"
     gene            complement(298..834)
                     /locus_tag="VIY07_05920"
     CDS             complement(298..834)
                     /locus_tag="VIY07_05920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381325.1"
                     /translation="MIGIDDQKLERAPEQDRKPAQAEEQTPNRTKENLQVSTPSRFSF
                     NRVENGFLRLDNSTGEVAYCSQAAGWTCQVVPIDGASNVESAKKDLSVLNGLRTEIAR
                     LQEDIAALKKEIAALNEPPPPRPPADLAPPSDKAPDVTIKLPSPEEMARAREFIESTW
                     RRLVEMIVTMQKDLMRKS"
     gene            1168..1527
                     /locus_tag="VIY07_05925"
     CDS             1168..1527
                     /locus_tag="VIY07_05925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HEY6381326.1"
                     /translation="MTDGTRGPDDRNEPPDDEAALSARLQRLGRRLANANRPSENGSG
                     PRQTADPSAIARGFRLSTELVAGVLVGAAIGWLLDRWLGISPLGLIVFLLLGFAAGVL
                     NVMRAAGVVRERELNDR"
     gene            1530..2282
                     /locus_tag="VIY07_05930"
     CDS             1530..2282
                     /locus_tag="VIY07_05930"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEY6381327.1"
                     /translation="MAVDPIHQFQIRELFPIAQIGNTEIAFTNSAAYMVAAVAVITLF
                     LLGGTAKRSLVPDRLQSTAELTYEFVANTIRSTAGSEGMRFFPFVFTLFMFILTVNII
                     GLIPYAFTVTTHIIITATLALTVFLTVLVYGFWKHGLHFFNLFVPKGIPLYILPLIVF
                     IEVLSFLSRPISHSVRLFANMLAGHITLKVFASFITLLGGAGIIGMVGATLPLALVVA
                     LTALELLVAFLQAYVFAILTCIYLNDAIHPGH"
     gene            2315..2542
                     /locus_tag="VIY07_05935"
     CDS             2315..2542
                     /locus_tag="VIY07_05935"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEY6381328.1"
                     /translation="MDPIAAKYIGAGIACIGMGGAGVGVGAIFGHYLAAALRNPSAAQ
                     GQFGNLIFGFAVTEALGIFSLLIALLLLFAL"
     gene            2564..3097
                     /locus_tag="VIY07_05940"
     CDS             2564..3097
                     /locus_tag="VIY07_05940"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEY6381329.1"
                     /translation="MATTAHTQAPSEHKGAFPPFDSSTFASQLVWLVITFVLLYALMA
                     KVALPRVGSIIAQRQNRIDEDLAQANAFKAQSDAALAAYEKALADARARAQAIAGEMR
                     DKQAAETEATRKKLEGQLNTKLAEAEKIIGASKQAAMANVRNIAADAAKAIVERLIGT
                     KPADSAVAAAVKDALKS"
     gene            3109..3600
                     /locus_tag="VIY07_05945"
     CDS             3109..3600
                     /locus_tag="VIY07_05945"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663913.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. Subunit B is part of the
                     membrane proton channel; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit B"
                     /protein_id="HEY6381330.1"
                     /translation="MELLRDPETWVAVAFVIFLGVLAYLGAHKMIMKALDDRAERIKA
                     ELGEARRLKDEAAELLAEYQRKRQAAEAEAQDIIEGAKAEADRLATEAKGRIEDFVAR
                     RTALAETKIAQAEAQATADVRSAAADAAIAAAEKILSAETKGKLAAELIAKGIDDVRK
                     KLN"
     gene            complement(3613..4230)
                     /locus_tag="VIY07_05950"
     CDS             complement(3613..4230)
                     /locus_tag="VIY07_05950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381331.1"
                     /translation="MTGLLLVLAGCGSSNPLSGSALDLFSTSSKASAGSEASAESAAD
                     VECPNVIVRTGAATLMIGSKPAEGEPTALDLRYQATIVRTARECRVNSGIMTMKVGIE
                     GRVITGPAGGPGTVNVPVRLALVQEGVNPKTILSKFANQQVEITGSVNSVPFTHIDPE
                     ITFPLPQPIANIDSYVVYVGFDPTGAQQEKRKPAGKPKPSKPRQS"
     gene            complement(4327..4911)
                     /locus_tag="VIY07_05955"
     CDS             complement(4327..4911)
                     /locus_tag="VIY07_05955"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HEY6381332.1"
                     /translation="MAFFRTVSSNDNLPAITGKGIMLRVPHSGDFAEWANLREVSRRF
                     LVPWEPIWPADDLTRGAFRRRLKRYAEDQRSDLAYAYLIFRTEDNAMVGGLTVANIRR
                     GVAQAGSIGYWIGEPFAHRGYMTAAVRALIPYSFTTLRLHRLEAACIPDNIASVRLLE
                     KTGFRQEGYARGYLCINGTWQDHLLYARLKDDAG"
     gene            complement(4938..6209)
                     /locus_tag="VIY07_05960"
     CDS             complement(4938..6209)
                     /locus_tag="VIY07_05960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY6381333.1"
                     /translation="MSVEVTRLPSGLSVVTDRMPHLETASLGVWIGSGSRSEKPDEHG
                     ISHLLEHMAFKGTKRRSARQIAETIEAVGGDLNAATSVESTGYFARVLRADVLLALDV
                     LSDILSEPTFDGDELRREQNVIVQEIGATEDAPDDLVFDRLQETAFPQQSIGRSILGT
                     PETVRSFNPTRLRSYLARNYRAPDMVVAAAGAVEHQAIVAEVDKRLAGFKGPAAPEPE
                     AAHFRGGTRVETRDLEQVHIAMALQGLPVRDEQLYSLQVFTSVLGGGMSSRLFQEVRE
                     KRGLCYAIHAFHMPFADTGLFALYAGTDESDAPELMRVVIDQIGNATETLNDTEINRA
                     KAQMKAGLLMALESSEARVGQLARQMLAYGRPIPLDEVVAKIDAVTVDSARAAGRALI
                     GRAKPAIAALGPGSGLASTAAIAESLVRRAA"
     gene            complement(6206..7621)
                     /gene="thrC"
                     /locus_tag="VIY07_05965"
     CDS             complement(6206..7621)
                     /gene="thrC"
                     /locus_tag="VIY07_05965"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEY6381334.1"
                     /translation="MRYVSTRGEVPALDFVEVLLAGLARDGGLYVPEHWPVLNRGAVE
                     SFAGKPYAEVAVEVVRPFVGDGIAETDLARMAREAYGNFRHPAVAPLTQLAPNLFVLE
                     LFHGPTLAFKDLAMQFVARLMDHVLHQRGERTTIVVATSGDTGAAAIEAFRGRGQADL
                     VVLFPQGRISDVQRRMMTTIPDANVHAIAIEGTFDDCQALVKSMFNHHVFRDRLRLSG
                     VNSINWARIVAQAVYYFTAAVALGAPHRKVAFTVPTGNFGDVYAGYVASRMGLPVDRL
                     VVATNINDILVRTFTTGAYEVRNVVATTSPSMDIQVSSNFERVLFDVCGRDAQAVRGL
                     MASLAQSRRFVLPAAALKQLRFLFAADRADEQESAAEVRAWMREANYCVDPHTAVALA
                     VAEKETRDPSVPMVVLSTAHPAKFPDAVRAACGVVPPLPDRLADLAKRNERVTVLPAD
                     QAAVERYVTSVSRASREGAAA"
     gene            complement(7708..8460)
                     /locus_tag="VIY07_05970"
     CDS             complement(7708..8460)
                     /locus_tag="VIY07_05970"
                     /inference="COORDINATES: protein motif:HMM:NF014193.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HEY6381335.1"
                     /translation="MSKALRRPKGSVLDATLLAIAGVAILIGLGVWQLDRKVWKENLI
                     TTINARLARAPENLPPRASWPALREDGAEFRRVVFPAEFLDGEEALVYTAGSPLRPDV
                     KGPGYWVFAPARLAGGSIILINRGFVPAERKDPGTRAEGNPRGIIDVVGVLRWPETRG
                     SFTPADDPKNNVWFLRDSNSIAAFKKWATAAPFYIDQEGPVPSGSWPKPGKLEAHLPD
                     NHLQYAITWFGLALALAGVYVVWLARHLFRRD"
     gene            complement(8457..8843)
                     /locus_tag="VIY07_05975"
     CDS             complement(8457..8843)
                     /locus_tag="VIY07_05975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HEY6381336.1"
                     /translation="MANEASHNALPIGQGLRGRCPRCGEGHLFQGFLSLRPACECCGL
                     DYSFADAGDGPAVFGILIGGFIVVFAALITEIVYRPPYWVHAALWLPLILVVTLVPLR
                     AIKGLLIALQYHHKAAEGRLTDRSET"
     gene            complement(8916..9761)
                     /locus_tag="VIY07_05980"
     CDS             complement(8916..9761)
                     /locus_tag="VIY07_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HEY6381337.1"
                     /translation="MADVHAKQHDYHLVDPSPWPAVGAVSAFILAVGAISWMHHMYAA
                     APVVFGIGVLGVLYTFVAWWRDVIREAEVDGFHTRVVQISHRYGMILFIASEVMFFVA
                     WFWAYFNTALFPGDPQEIGRLAATGGVWPPKGIETFDPWHLPLLNTLILLTSGTTVTW
                     AHHALLENDRQGLKWGLVLTIALGLAFTCVQAYEYSHAHFAFKGNIYGATFFMATGFH
                     GAHVIIGSIFLIVCLFRALAGHFTPKQHLGFEFAAWYWHFVDVVWLFLFACIYVWGSG
                     PAHAG"
     gene            complement(9776..10381)
                     /locus_tag="VIY07_05985"
     CDS             complement(9776..10381)
                     /locus_tag="VIY07_05985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HEY6381338.1"
                     /translation="MTERSRHAEQKPLRRDLLVAACCGALVVGMVGAAYAAVPLYNWF
                     CKTTGFGGTPQVSEKAPDHVLGRTLTIRFDSNVAPGLPWRFQPEQNHIQVRIGEVATV
                     HYKVINEAARDVSGQASYNVSPPTVGGYFNKINCFCFTEQRLKAGETREMAVVFYIDP
                     SIANDRDQNDLSTITLSYTFYRQRESERPIAEAPERNSNRL"
     gene            complement(10401..10565)
                     /locus_tag="VIY07_05990"
     CDS             complement(10401..10565)
                     /locus_tag="VIY07_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018460005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoxF protein"
                     /protein_id="HEY6381339.1"
                     /translation="MNERRDDDGIVLTEAQKRARRSRSIAIALALAALVILFYVMTLV
                     KGPGVLMRPI"
     gene            complement(10580..11536)
                     /locus_tag="VIY07_05995"
     CDS             complement(10580..11536)
                     /locus_tag="VIY07_05995"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HEY6381340.1"
                     /translation="MSLVSAGTDVRGPLGTAGPAEPSLATVGDYIALMKPRVMSLVVF
                     TALVGLAVAPGHLHPITGFTALLCIAVGAGAAGALNMWYDADIDAVMTRTARRPVPMG
                     RVLPGEAFSFGLTLAGFSIVTLGLLVNWLAAGLLAFTIFFYVAVYTVWLKRSTAQNIV
                     IGGAAGAFPPMIGWAAATGSLTLEPVVLFLIIFFWTPPHFWALALYRTEDYARAGVPM
                     LPVVAGDISTRRQILLYTAILVPLGIAPWLLGYADALYGITAVAAGAIMMALGWQVLR
                     EQRPAERASRNLFAFSILYLFLLFAVLLVERGWGGLIARLAA"
     gene            complement(11555..13192)
                     /gene="ctaD"
                     /locus_tag="VIY07_06000"
     CDS             complement(11555..13192)
                     /gene="ctaD"
                     /locus_tag="VIY07_06000"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEY6381341.1"
                     /translation="MASNTAASHSARDAHVHDAHDAHEHHPTGWRRFVYSTNHKDIGT
                     MYLVFALVAGVIGAAMSIAIRMELQNPGVTIFPTPHEYNVFVTAHGLIMIFFMVMPAM
                     IGGFGNWFVPLMIGAPDMAFPRMNNISFWLLPASFALLLTSAFVEGEPGSNGVGAGWT
                     LYAPLSTSGHPGPAVDFGILSLHLAGASSILGAINFITTIFNMRAPGMTLHKMPLFVW
                     SILVTVFLLLLALPVLAGAITMLLTDRNFGTTFFSNEGGGDPILYQHLFWFFGHPEVY
                     ILILPGFGMISQIVATFSRKPVFGYLGMAYAMVAIGGIGFVVWAHHMYTVGMSTGAQA
                     YFIAATMVIAVPTGVKIFSWIATMWGGSIEFRTPMLWALGFIFLFTVGGVTGVVLANA
                     GVDRVLQDTYYVVAHFHYVLSLGAVFAIFGGWYYWFPKMTGYMYNETIGKLHFWFTFI
                     GVNLVFFPQHFLGLAGMPRRYVDYPDAFHGWNLVSSYGSYISGFGVLIFFFGMVEAFV
                     RKRVAGNNPWGVGATTLEWTLSSPPPFHQFETLPRIK"
     gene            complement(13231..14019)
                     /gene="coxB"
                     /locus_tag="VIY07_06005"
     CDS             complement(13231..14019)
                     /gene="coxB"
                     /locus_tag="VIY07_06005"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEY6381342.1"
                     /translation="MIAGVALAASGQPEPWQMGLQKGATPVMDDIIWFHDFLLWLITA
                     ITLFVLALLVIVMVKFNARSNPVPSRTTHNTAIEVLWTVVPVLILVTIAVPSFRLLFF
                     QLNMPKADLTLKATGKQWFWSYSYPDSKIEFDSLMVQDKDLKAGQPRLLTVDNELVVP
                     VNKVVHVLTTGADVIHAFTVPAFGIKIDAIPGRINETWFKAEREGVYYGQCSELCGKD
                     HAFMPIAVRVLSEKDYAAWLEEAKKKFATDGSRPTAVAAGGAAN"
     gene            14472..15011
                     /locus_tag="VIY07_06010"
     CDS             14472..15011
                     /locus_tag="VIY07_06010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEY6381343.1"
                     /translation="MMGILEHGRRIIACATRLAAVTLIAGLMLAPAESVLAQGAVKSV
                     HKDWQIRCDTPPGAKAEQCALIQSVTAEDRANVGLTVIVLKTADQKSRLMRVVAPLGV
                     LLPSGLGLKIDQADIGRAGFVRCLPNGCIAEVVMDDELIKKLRSGKAATFIIFQTPEE
                     GIGFPMSLAGFGEGYDKLP"
     gene            complement(15016..15402)
                     /locus_tag="VIY07_06015"
     CDS             complement(15016..15402)
                     /locus_tag="VIY07_06015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HEY6381344.1"
                     /translation="MPLIRIDLAKGMSAQFRKTLGDIVYKAMIDIIDVPKDDKFQIIT
                     EHPPEELNYAPSYLGIEHSSGLVLIQVTMSVGRTVQAKQAFYREIAERLHAQLGIRKE
                     DVFINLVETARENWSFGNGIAQYVTA"
BASE COUNT         3244 a         4637 c         4592 g         2959 t
ORIGIN      
        1 tgcacccagg gcgcgttttc cggtgcgagc cgatcgagcg ccgcaatcag atcggtctgc
       61 acgtcgggat cggcgttttc ctggatcgca agggaagccg aggtgtggcg caggtaaacc
      121 aacaaaataa cgtcacccgc gccggtctgg tcgatgaaat tcactgcatt gcttgtgatg
      181 tcgataaatc ccgtcccctg agtttgaacg tgcaaggtcg tgctggcgat cagctccagc
      241 ttggcctcga tgatagggga cattcgggcc ggcatgacgt gaggctgaag cttccgttca
      301 gctcttgcgc atcagatctt tttgcatcgt gacaatcatc tcgaccagtc ggcgccaggt
      361 cgattcaata aactcacgcg cacgcgccat ttcctccggg cttggcagtt tgatcgtcac
      421 atcaggggcc ttgtcggacg gcggcgccag atctgccggc gggcgcggcg gcggaggttc
      481 gttcagggcg gcaatttcct tcttcagtgc cgcaatgtct tcctgcaatc gggcaatttc
      541 agttctcagt ccgttcagaa ccgaaaggtc cttttttgca ctttcaacat tcgacgcacc
      601 atcgatcgga acaacctgac aagtccagcc tgcggcctgg ctacagtaag cgacctcgcc
      661 tgtgctgtta tcgagccgca ggaaaccatt ctccacccgg ttaaagctga aacgacttgg
      721 cgtactgacc tgcagattct cctttgtccg atttggagtc tgctcttccg cttgggcggg
      781 cttccgatcc tgttcggggg cgcgctcgag cttctggtcg tcgatgccga tcaccgtctg
      841 cgccggcgca gcgcttgctg cgaaggtcag catcaaagtc aatgcgggca tcaagatgcg
      901 catggattgc ctttaaacca gttgcgggtc tcagtcagcg tagcaccgca tttttccatt
      961 ctgaactcat gcttcgacct tttggagact ttggcgatgc acacaacggt tggattggat
     1021 tgtcgaaaat catgcctttt ttgatccaga tcaaacactt atgccgcagt tgccgttcct
     1081 tgactcgctg aaacccgatc agtatggtcc gcgcggcttt tagggcggcg gaacacgcga
     1141 aacctgaaat ccacgcgggt cgaaagcatg actgacggca cgcgcggccc agatgatcgc
     1201 aacgaaccgc cggacgacga ggctgctctc tccgcgaggc tccagcgtct cggcagacgg
     1261 ctcgcgaacg cgaaccggcc atccgaaaac ggctccggtc ctcgtcagac cgccgatcct
     1321 tccgcgattg ctcgcggttt ccggttgtcg accgaactgg ttgccggggt gcttgtgggc
     1381 gcggcgatcg gctggctgct cgatcgctgg ctgggaattt cgccgttggg cctcatcgta
     1441 tttctattgc tcggcttcgc agcgggcgtg ctgaatgtga tgcgagcggc gggggtcgtt
     1501 cgcgaacgag aattgaacga ccggtagtca tggctgtcga tccaatccac caattccaga
     1561 tccgcgagct gtttccgatc gcccagatcg gcaataccga gatcgccttc accaattcgg
     1621 cagcctacat ggtcgcggcc gtagccgtaa tcacgctatt tcttcttggc ggcaccgcca
     1681 aacgaagcct ggtaccagac cgcctgcaat ctacggcgga actgacctac gagtttgtcg
     1741 ccaataccat aagaagcacg gccggcagcg aaggcatgcg cttcttcccc ttcgtgttca
     1801 cgctgttcat gttcattctg accgtgaaca tcatcggcct tattccatat gccttcaccg
     1861 tcaccactca catcatcata acggcgaccc tggcattgac ggtcttcctc accgtcctgg
     1921 tttacggctt ttggaagcat gggctgcact tcttcaacct gttcgtgccc aagggcatcc
     1981 cgctctatat cctgcccctg atcgtgttca tcgaggtgct atcgttcctc tcgcgcccga
     2041 tttcgcacag cgtccgtctg ttcgccaata tgctggcggg acacatcacg ctgaaggtgt
     2101 tcgcaagctt catcaccttg cttgggggag ccggaatcat cggcatggtc ggcgccacgc
     2161 tgccactggc attggtcgtc gcgctcaccg ctttggagct gctggtcgcc ttcctgcagg
     2221 cgtacgtgtt tgcaatcctc acctgcatct atctcaacga tgccatccat ccaggccatt
     2281 gagagccggt cacgattaaa caaaggagtt catcatggat ccaatcgcag caaaatatat
     2341 cggtgccgga attgcctgca tcggaatggg cggcgccggc gtcggcgtgg gcgccatctt
     2401 cggtcattac ctggccgcgg cacttcgcaa tccatccgcc gcacagggac aattcggcaa
     2461 cctgattttc gggttcgccg tcaccgaagc gctcggcatc ttttcgctgc tgatcgcgct
     2521 cctgctcctt ttcgcgctgt aagacggcag tccgtaatcc gcaatggcga ccaccgccca
     2581 tactcaagcg ccgagcgagc acaagggtgc gttcccaccc ttcgattcca gcacgtttgc
     2641 ttcgcagctc gtatggctcg tcatcacttt cgtcctgctt tatgcgttga tggctaaggt
     2701 cgccctgccc cgcgtcggca gcatcatcgc tcagcgccaa aaccggattg acgaagacct
     2761 ggcgcaggcc aatgccttca aggcgcaatc cgacgcagcg cttgcggcct acgaaaaagc
     2821 tttggccgat gcccgcgccc gcgcgcaggc gatcgcgggc gaaatgcggg acaaacaagc
     2881 tgcagaaaca gaggccacgc gtaaaaagct ggagggacag ctcaacacca agctggcgga
     2941 ggccgagaag atcatcggcg cctccaagca ggcagccatg gcgaacgtgc gcaacattgc
     3001 ggccgatgcg gccaaggcca tcgtcgaacg gctgatcggg acgaagccgg ccgatagtgc
     3061 cgttgctgcg gcagtcaaag acgcgctcaa aagctgacgg aaaagacaat ggaattgctg
     3121 cgcgatccgg aaacttgggt agccgttgca ttcgtgatct tcctgggcgt tctggcctat
     3181 ttgggcgctc ataagatgat catgaaggca ttggatgacc gtgccgagcg catcaaggcg
     3241 gagctcggcg aagcgcggag gctcaaggac gaggcggccg agcttttggc tgagtatcag
     3301 cgcaagcgac aggctgcaga agcagaagcg caggacatta tagagggggc caaagccgaa
     3361 gccgatcggc tcgcgacgga ggcgaaaggg cgcatcgaag atttcgtcgc ccgtcgaact
     3421 gccttggcgg aaaccaagat tgcccaggca gaagcacagg cgacggctga cgtccgcagc
     3481 gctgccgccg acgccgctat cgctgccgcg gagaagatcc tcagtgcgga aaccaaagga
     3541 aagcttgctg ccgaactcat cgccaagggc atcgacgatg tccgcaagaa gctgaactag
     3601 gcgcggtttc gatcagcttt gacgcggctt cgacggcttt ggttttcctg cgggcttcct
     3661 tttttcctgc tgcgcccccg tgggatcgaa gcccacatag acgacatagg aatcgatatt
     3721 cgcgatcggt tgcggcagag gaaatgttat ttcaggatca atgtgtgtga acggaacgct
     3781 attcaccgaa ccagtaattt cgacttgctg gttcgcgaat ttcgagagaa tggttttcgg
     3841 gtttacgcct tcctgaacca gggcgaggcg aaccggcacg ttgacggtac ccggacctcc
     3901 cgctgggccg gtaataacac ggccctcgat cccaaccttc atggtcatga tgccggagtt
     3961 aacccgacac tcacgcgcgg tgcggacaat cgtggcctga taacgcagat cgagcgcggt
     4021 cggctcgcct tcggcgggct tgctgccgat catcagggta gcggcgccgg tgcgtacgat
     4081 cacgttggga cattcgacat cggcagcaga ttcggcgctg gcctcgctgc cggcgcttgc
     4141 ctttgaagac gtactgaaaa gatccagggc ggagccactg agcgggttgc tcgagccgca
     4201 accggcgagc accaacagta atcctgtcat cgctcctatc ccggccgctg actgcgcgac
     4261 ttgtccattt ttctgttcgg gcattttttc ttgccgcctt ttttctctct gcgttaaccg
     4321 gtgccttcaa ccagcatcat ccttgagccg tgcatacagc aaatgatcct gccaagtccc
     4381 gttgatgcac agatatccgc gcgcataacc ctcttgccgg aagccggtct tttccaatag
     4441 acggaccgag gcgatgttgt cgggaatgca ggctgcttcc aggcgatgca ggcgcagcgt
     4501 cgtgaagctg tacggtatca gggcgcgcac cgctgcggtc atatagcctc tgtgggcgaa
     4561 gggctcgcca atccaatacc cgatactgcc cgcttgagcc acgccgcgcc gaatattggc
     4621 gacggtcaat ccgcccacca tggcattatc ctcggtgcgg aagatcaggt aggcgtaggc
     4681 cagatcgctg cgctgatcct ccgcgtatcg cttgagtctt cgacgaaatg cgccacgcgt
     4741 cagatcatcg gctggccaga tcggctccca cgggaccaga aagcggcggc tcacctcacg
     4801 caagtttgcc cattcggcga agtctccgct gtgaggcacg cgcagcatga ttcccttgcc
     4861 ggtgatagcc ggcaggttgt cattggaact gacggttcta aagaaggcca tggaggtgtc
     4921 agctgagccc tcgcccgtca cgcggcgcgg cgaaccagac tttcagcgat tgcagcggtg
     4981 cttgcaaggc cgctgcctgg cccgagtgcg gcaattgcag gttttgcgcg gccgatgagg
     5041 gcacgaccag ctgcgcgtgc gctgtcgacg gtgacagcgt cgatcttggc aacgacttca
     5101 tcgagcggaa ttgggcgccc atacgcgagc atctggcggg ccaattggcc gacgcgcgcc
     5161 tcggagcttt ccagcgccat caataggcca gctttcatct gcgccttggc acgattgatt
     5221 tccgtgtcgt tcagcgtttc ggtggcgttg ccaatctggt cgatgacgac gcgcatgagc
     5281 tcgggagcgt cggattcgtc cgttccggca taaagagcga acagtcctgt gtctgcaaag
     5341 ggcatgtgga aggcgtgaat cgcgtagcaa agtccgcgct tctctcgcac ctcctggaac
     5401 agacgcgatg acattccgcc gcccagaacg cttgtgaaca cctgcaagct gtaaagctgc
     5461 tcgtcgcgaa cgggcagtcc ctggagcgcc atggcaatgt gcacttgctc gaggtcgcgg
     5521 gtttccactc tggtgccgcc gcggaaatgc gccgcttcgg gctctggagc agcagggccc
     5581 ttgaacccgg ccaggcgctt atcgacttcg gcaacgatcg cctggtgctc aacggcaccg
     5641 gcggcggcta ccaccatgtc gggtgcgcga tagttgcgtg ccaaatagct ccgcagccgc
     5701 gtcgggttaa acgagcgcac ggtttccggt gtgccgagaa tggagcgacc gatcgattgc
     5761 tgaggaaacg ccgtctcctg caagcgatcg aaaacgaggt catcgggcgc atcctcggta
     5821 gccccaattt cctgaacaat cacattctgc tcgcgccgca attcgtcgcc atcgaaagtg
     5881 ggctcggaca gaatgtcgga caacacatcc agcgcaagaa ggacgtcggc cctgagcact
     5941 cgcgcaaaat aaccggtcga ttcgacgctg gttgccgcat tcaggtctcc gccgaccgcc
     6001 tcaattgtct ccgcgatctg ccgggcgctt cggcgcttgg ttcccttgaa cgccatatgt
     6061 tcgagcaaat gcgagatccc gtgctcgtcc ggcttctcgc tgcggctgcc cgaaccgatc
     6121 cagacgccaa gggaggcggt ttcaagatgc ggcattcggt cggtcaccac cgaaaggcca
     6181 gaaggaagac gggtcacttc gacgctcatg cagctgctcc ttcacgcgaa gcgcgtgata
     6241 ctgacgtcac atatcgttcc actgcggcct gatctgccgg cagcacggta acgcgttcgt
     6301 tgcgctttgc cagatcagca agtctgtccg gcagaggcgg tacaacgccg caagccgctc
     6361 tcaccgcatc gggaaattta gccggatgtg ccgtcgacag tacgaccatc ggaaccgaag
     6421 gatcgcgggt ctccttttcg gctactgcga gggcaaccgc ggtgtgcggg tccacgcaat
     6481 aattggcctc gcgcatccag gcgcgaactt cagccgcgct ctcctgctcg tcggcacgat
     6541 cggcggcaaa cagaaatcgc aactgcttga gcgccgccgc aggcaacaca aaacgtcggg
     6601 attgggccaa cgaggccatc aatccgcgga ccgcttgggc gtcccggcca cagacatcga
     6661 acagcacgcg ttcgaagttc gatgaaacct ggatatccat cgatggcgag gtcgtggcaa
     6721 cgacattgcg aacctcgtag gcaccggtgg tgaaggtgcg gacgaggatg tcattgatgt
     6781 ttgtcgccac caccaatcga tcaaccggca aacccatgcg cgaagcgaca tagcccgcgt
     6841 atacgtcgcc aaaatttcct gtcggaaccg tgaacgcgac ctttcggtgt ggcgctccga
     6901 gtgcgacggc agcagtaaaa taatagaccg cctgcgcgac aatgcgcgcc caattgatcg
     6961 aattgacgcc ggaaagccgc aagcgatcgc gaaagacatg atgattgaac atggacttta
     7021 cgagtgcctg gcagtcgtca aacgtgcctt caatggcaat cgcatgcacg ttcgcgtccg
     7081 gtatcgtggt catcatccgc cgctgcacgt cggagatgcg tccttgcgga aagagaacca
     7141 cgagatccgc ctgcccacga ccgcgaaagg cttcgatggc ggctgcgccg gtgtcaccgg
     7201 atgtcgcaac gacgatggtg gttcgttcgc cgcgttgatg caaaacatgg tccatcagcc
     7261 gcgccacgaa ctgcatcgcc aaatccttga aggcgagcgt gggtccgtgg aaaagctcca
     7321 ggacgaacaa gttcggcgcg agttgagtga gcggggccac tgccggatgc ctgaaattgc
     7381 catacgcttc gcgggccatg cgcgcgagat ccgtctcggc aattccatct ccgacgaagg
     7441 gccggaccac ctcgactgcg acttcggcgt aaggcttccc cgcgaagctt tcgaccgcgc
     7501 cgcgattgag gactggccaa tgttccggca cgtaaagacc gccgtcgcgg gcgaggcctg
     7561 cgagcagtac ctcgacgaaa tcgagcgctg gaacttcgcc ccgagtggag acgtaacgca
     7621 ttgatctggc tttactttat gacccaataa cattcttggc ggctggcgca cagtagcctt
     7681 gagcgctgcc tttcacaagg aaaccgctca gtcccggcga aagaggtgcc gggcaagcca
     7741 caccacatag acacccgcaa gggccagggc gaggccgaac cacgtaatgg cgtattgcag
     7801 atgattgtcg ggcaaatgcg cttcaagctt gcccggtttc ggccagctgc ccgagggaac
     7861 cggtccctcc tggtcaatat agaaaggggc ggcggtcgcc catttcttga atgccgcaat
     7921 cgaattcgaa tcgcgcagaa accagacatt gtttttcggg tcatcagccg gggtaaagga
     7981 cccgcgcgtc tccggccaac gcagaacgcc gaccacatcg atgatgccac gcggattacc
     8041 ttctgcgcgc gtgccaggat ccttgcgctc ggccggcacg aaaccgcgat tgatgagaat
     8101 gatgctgccg cccgcgagcc gggcgggcgc gaagacccag taccccggcc ctttcacatc
     8161 gggccgcaag ggagagccgg cggtatacac aagcgcttcc tcgccatcga ggaactcggc
     8221 agggaaaaca acgcggcgaa attctgcgcc atcctcccgc agcgcgggcc agctcgcgcg
     8281 aggtggcaga ttttcgggcg cgcgggcaag ccgggcattg atcgttgtga tcagattttc
     8341 tttccagacc ttgcggtcga gttgccagac ccccaacccg atcagaatcg cgacccccgc
     8401 gatggcgaga agtgtcgcat cgagcacgct gccttttggt cttcgcagcg ccttgctcac
     8461 gtctcgctcc gatctgtgag ccggccctcg gccgccttgt gatgatattg cagcgcaatc
     8521 agcaaacctt tgatcgcacg caagggaaca agcgtcacca ccaggatcaa gggcaaccac
     8581 agggctgcat gcacccaata tggtgggcgg tacacgatct cggtgatcaa cgccgcgaat
     8641 acaacgataa atccgccaat caggatcccg aatacagctg gaccatcgcc cgcatcagcg
     8701 aagctgtagt cgaggccgca gcattcgcac gctggccgca atgacagaaa gccctgaaat
     8761 aaatgcccct cgccgcagcg cgggcagcgg ccacgcaggc cctgaccaat cggcagggcg
     8821 ttatgtgatg cttcgttggc catagcgtca gaaaaaggac gaaaacaaaa gggcggcgtg
     8881 atgacgccgc cccttcaagg aaacctacat gataatcaac cagcgtgcgc cgggcccgat
     8941 ccccaaacgt atatgcacgc gaagaggaac agccatacca cgtcgacgaa atgccagtac
     9001 caggcggcga attcgaagcc gagatgctgt ttgggggtga agtggcccgc caacgctcgg
     9061 aacagacaaa cgatgaggaa aatcgagccg atgatcacgt gggcaccatg aaatcctgtc
     9121 gccatgaaaa acgtggcgcc gtaaatgttg cctttgaaag cgaagtgcgc gtgcgagtac
     9181 tcgtaagcct gcacgcaggt gaaggcgagg ccgagcgcga tggtcaggac caggccccat
     9241 ttcagtccct ggcgatcatt ttcaagcaga gcatggtgcg cccaggtcac cgtcgtgccc
     9301 gatgtgagaa ggatcaacgt gttcagtagc ggcaggtgcc aggggtcaaa cgtctcgatg
     9361 cccttcggcg gccacacgcc acccgtagcg gcaaggcgac caatctcctg gggatcaccc
     9421 gggaacaatg cagtgttgaa atacgcccag aaccaggcga cgaagaacat cacctcggag
     9481 gcgatgaaca ggatcattcc gtagcgatgg gagatctgca ccacgcgcgt gtggaaaccg
     9541 tcgacttcgg cctcacggat gacatcgcgc caccacgcca cgaaggtgta gagcaccccg
     9601 aggaccccaa tgccaaacac caccggagcg gcagcgtaca tatgatgcat ccagctgatg
     9661 gcgccgaccg ccaggatgaa agcggacacc gcaccgactg ccggccacgg actcggatcg
     9721 accaggtggt agtcgtgctg cttggcgtgg acgtcggcca tcgtcttggt ctccgttaaa
     9781 gcctgttcga atttctctcc ggcgcctcgg cgatcggccg ctcggattcg cgctgccggt
     9841 agaaagtgta ggacagcgta atggtgctga gatcattctg gtcgcggtcg ttcgcaatcg
     9901 acggatcaat gtagaaaacg acggccatct cccgcgtctc gcctgctttc aggcgctgct
     9961 ccgtaaagca gaagcagttg atcttgttga agtagccccc aaccgtcggt ggcgagacat
    10021 tgtatgacgc ttgcccggac acgtcgcgcg cagcttcgtt gatgactttg taatgcacgg
    10081 tcgcgacttc gccgatacgg acctgaatgt ggttctgctc cggctgaaat cgccagggca
    10141 gccccggcgc cacgttcgaa tcaaatcgga tagtgagggt ccgccctagc acatgatccg
    10201 gagctttttc cgaaacctgg ggggtgccgc cgaagccggt ggtcttgcag aaccagttgt
    10261 aaagcggaac cgctgcatag gcagcgccaa ccatgccgac aaccaacgcg ccgcagcaag
    10321 cagccacgag cagatcgcgg cgcagcggct tttgttcggc atggcgagag cgttcggtca
    10381 tcgatcggca cagctcatgg tcagattggg cgcatcagga cgcccggccc tttcaccagc
    10441 gtcatcacat agaacaagat aaccaatgcg gcgagcgcaa gcgcgatcgc gatcgagcgc
    10501 gaacgacgcg cgcgtttctg cgcttccgtt agcacgatcc cgtcgtcgtc acgtcgttca
    10561 ttcatggcga taccgagagt cacgccgcca atcgggcaat cagcccgccc catccacgct
    10621 cgaccagcaa gactgcgaac aaaaggaaca gataaaggat cgagaaggcg aagaggttcc
    10681 ggctcgcgcg ctcggcgggc ctttgctcgc gcaggacctg ccagcccagc gccatcataa
    10741 tcgcgcctgc ggcaaccgca gtgatgccgt agagcgcgtc ggcgtagccg agaagccatg
    10801 gcgcgatgcc aagcggcacg aggattgcag tgtagagcag gatctgacgt cgcgtgctga
    10861 tgtcgccggc gacgacaggc aacatcggaa cgccggcgcg cgcgtagtcc tccgtacgat
    10921 acagcgccag cgcccagaag tgcggcggag tccagaagaa gatgatgaga aacaggacta
    10981 cgggctcaag cgtcagcgaa ccggtggccg ccgcccagcc gatcatgggc ggaaaagcgc
    11041 cggcagcgcc cccgatgacg atattctgcg cggtcgagcg cttgagccac acggtataca
    11101 ccgcgacgta gaagaagatt gtgaaggcaa gcaggcctgc ggcgagccag ttcaccagca
    11161 aacccagtgt gacaatcgag aatcccgcaa gtgtaagtcc gaaggaaaac gcctcccccg
    11221 gaagcacgcg gcccattggc acaggtcgac gtgcggttct ggtcatcacc gcatcgatgt
    11281 cggcgtcgta ccacatattc agcgcgccgg cggccccggc tcccacggct atgcacagga
    11341 gcgcggtaaa tccggttatc gggtgcaagt ggccgggagc gacggcaagg cccacaagcg
    11401 ccgtgaatac cacgagcgac atgacccgcg gcttcatcag cgcaatgtag tcgccgaccg
    11461 tcgcgaggct cggctctgcc gggccggctg tgccaagcgg cccacggacg tctgtgcctg
    11521 cgctgacaag cgacatgatc ggaccgagtc gttcctattt gatccgcggc agcgtttcga
    11581 actggtggaa cggcggcggc gacgaaagcg tccattcgag cgtggtcgcg ccgacgcccc
    11641 acgggttatt gcccgcgacc ctcttcctca cgaaagcttc gaccattccg aagaagaaga
    11701 tcagcacgcc gaatcccgaa atgtaggaac cgtacgagga gaccaggttc cagccatgaa
    11761 aggcgtccgg gtagtccaca tatcggcgcg gcatgccggc gagacccagg aagtgctgcg
    11821 ggaagaacac caggttcacg ccgataaagg tgaaccagaa gtgcagcttg ccgatggtct
    11881 cgttgtacat gtaccccgtc atcttcggga accaatagta ccagccgccg aaaatagcga
    11941 agacggcgcc gagcgagagc acgtagtgga agtgcgccac tacataataa gtgtcctgca
    12001 gcacgcgatc gacgccggca ttggccaaaa ccacgccggt cactccaccg accgtgaaca
    12061 ggaagataaa gccgagggcc cagagcatcg gcgtgcggaa ttcgatcgat ccgccccaca
    12121 tggtggcgat ccacgagaaa atcttcacgc cggtcggcac cgcgatgacc atggtggccg
    12181 cgatgaaata agcctgggca ccggtcgaca tgccgaccgt gtacatgtga tgcgcccaga
    12241 ccacgaagcc gatgccgccg atggcgacca tcgcgtaagc catcccgaga tagccgaaca
    12301 ccggcttgcg gctgaaggtg gcgacaatct ggctgatcat gccgaagccg ggaagaataa
    12361 ggatgtaaac ttccggatgg ccgaagaacc agaacaggtg ctgatagagg atcggatcgc
    12421 cgccgccttc attggaaaag aatgtcgtgc cgaaattgcg gtcggtcagt agcatcgtaa
    12481 tcgcgccggc caggacgggc agcgcgagca gcaacaagaa taccgtcacg agaattgacc
    12541 acacgaacag cggcatcttg tgcagcgtca tgccgggtgc gcgcatgttg aagattgtcg
    12601 tgatgaaatt gatggcgccg aggatcgacg aggcgccggc cagatgcagc gacaggatgc
    12661 cgaaatcgac cgccggtccc ggatggccgc tggtcgatag cggcgcatat agcgtccagc
    12721 cggccccgac tccgttggaa cccggttcgc cttcgacgaa agccgaggtc agcagaagcg
    12781 caaaggaggc agggagcagc cagaacgaaa tgttgttcat gcgcgggaag gccatgtccg
    12841 gcgcaccgat catcaatggc acaaaccagt tgccgaagcc cccgatcatc gccggcatca
    12901 ccatgaagaa gatcatgatc aggccgtgcg cggtgacgaa cacgttgtat tcgtgcggcg
    12961 tggggaagat ggtgacgccg gggttctgca gttccatgcg gatggcgatg gacatcgccg
    13021 cgccgatcac gccggcaacc agcgcaaaga caaggtacat cgtgccgatg tccttgtggt
    13081 tggtcgaata aacgaagcgg cgccatccgg tgggatggtg ctcatgcgca tcgtgagcat
    13141 catgtacatg cgcatcgcgt gcgctgtggg aagccgccgt gttgctagcc atcgttattg
    13201 tccttcgacc tcgtcgttgt cgcccgcgtc tcagtttgca gcgccgcccg cagccaccgc
    13261 ggttgggcga ctgccgtctg ttgcgaattt ctttttcgcc tcctcgagcc atgccgcata
    13321 gtctttttcg ctgagcaccc ggaccgcgat cggcatgaac gcgtgatcct tgccgcacag
    13381 ctcggagcat tgtccgtaat agaccccttc gcgctccgct ttgaaccagg tctcgttgat
    13441 gcggcccggg atcgcgtcga tcttgatgcc aaatgccggc accgtaaatg cgtggatcac
    13501 gtcggcgccc gtcgtgagga cgtgcacgac cttgttcacg ggcaccacca gttcgttgtc
    13561 aacggtgagt agccgcggct gaccggcctt aagatccttg tcctgcacca tcagcgagtc
    13621 gaattcgatt ttgctgtccg gatagctgta gctccagaac cactgtttgc cggtggcctt
    13681 caacgtcaga tccgcctttg gcatgttgag ctgaaagaac agcagccgaa acgacgggac
    13741 cgcaattgtc acaagaataa gaacgggaac gaccgtccag agtacctcga tagcggtgtt
    13801 gtgagttgtt cgtgagggca ccggattgct tcgagcgttg aacttcacca tgacgatgac
    13861 caggagcgcc aatacgaaca gcgtaatcgc agttatcagc caaagcagga agtcgtggaa
    13921 ccagatgatg tcatccatta ccggcgtggc acccttttgc aggcccatct gccacggctc
    13981 cggctggccc gatgcggcga gcgccactcc cgcgatcatt acgggcaaac ccgtggcgat
    14041 gaatgtgatc aaccgcttga gcaccagcat tgttcaatgc gctccttcga gaaaaacggc
    14101 cttgttcagg ccccctttgc cgcccaccac tgacatgatg ttcggcacga tcccgctgag
    14161 cacggcattt gccacgggcg tggcagcctg ggcggtgcgg cgggatgggg agaaatcccg
    14221 gcctctcaaa ccacaattcc agctttgccg caatgagcct aataggcgcc gggatgcgac
    14281 aaacggtgta tccaaaaggg ctccatcagg ccattttgca ggcatcttgc tggcggcccg
    14341 ccagacgcgt catgccttgc ttcacagagc ctttccgggc atgacccacg cgggcgaagt
    14401 aaaatgcagg tggcgattcg tctgacctgc gttggtatat gggccagcgc gaccggatgc
    14461 caagggattg gatgatggga atactggagc acggcaggcg gataattgcc tgcgcaacgc
    14521 gcctcgcagc tgtcacactg attgcggggc tgatgctcgc acccgctgag tctgtcctgg
    14581 ctcagggcgc cgtcaaatcc gtgcacaagg attggcagat tcgctgcgac accccgcccg
    14641 gagccaaggc cgagcagtgc gccctcattc agagtgtgac ggcggaagat cgcgccaatg
    14701 tcggcttgac ggtgattgtt cttaaaaccg ccgaccagaa gagccggttg atgcgcgtcg
    14761 tcgcgccgct gggcgtcctg ctgccctccg ggctcggcct caagatcgat caggccgata
    14821 tcggccgtgc cggtttcgtg cgctgtcttc cgaatggttg catcgctgaa gtcgtgatgg
    14881 acgacgagct catcaagaag ctgcgcagtg gcaaggctgc gaccttcatt attttccaga
    14941 ctccggaaga aggcattggc tttccaatga gccttgccgg cttcggggag ggctacgaca
    15001 agctgccgta gggcctcagg cggtcacgta ctgtgcaatg ccgttgccga acgaccagtt
    15061 ttccctcgcc gtctctacca ggtttatgaa cacatcctct ttgcggatgc cgagctgagc
    15121 gtgaagtcgc tctgcaattt ccctgtaaaa tgcttgcttg gcctgaacag tcctccccac
    15181 actcattgtg acctgaatca aaacgagacc tgacgagtgc tcgatcccga gataggaggg
    15241 cgcgtaattc agttcctcag gcgggtgctc cgtaatgatt tgaaacttgt catctttcgg
    15301 cacatcgatg atgtcgatca tcgctttgta gacgatgtcg ccaagcgtct tgcggaattg
    15361 agcggacatt cccttggcga ggtcgattcg aatgagcggc atcggggctc tctttcttta
    15421 agtcgtgggc ag
//
LOCUS       DATDHO010000315         1935 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_262918, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000315 DATDHO010000000
VERSION     DATDHO010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1935
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_262918"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1161
                     /gene="purD"
                     /locus_tag="VIY07_06020"
     CDS             <1..1161
                     /gene="purD"
                     /locus_tag="VIY07_06020"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEY6381345.1"
                     /translation="REAECVAIDPADHNAVIAFAKDRKIELVVIGPEVPLCAGIVDDL
                     EAAGIKAFGPTKWAARLEGSKGFTKDLCKANNIPTAAYERFKGASAAKDYVRKKGAPI
                     VVKADGLAAGKGVVVAETIAEAEAAIDMMFGGGLGAPAWEIVVEECLVGEEASFFALC
                     DGETAIQLASAQDHKRVDDGDKGPNTGGMGAYSPAPVMTEDMNRRVMDEIIHPTVRAL
                     KRAGAPYKGVLFAGLMITKEGPKLIEYNVRFGDPECQVLMLRLMSDLVPALLAARDGQ
                     LKNFDLRWYPDAALTVVMAAKGYPGNYNKGSTIVGLDAAAQIEGVQIFHAGTKADGGR
                     IVANGGRVLNVSARGKTVREAQARAYAAIDRINWPDGFCRRDIGWRAIEREK"
     gene            1228..1890
                     /locus_tag="VIY07_06025"
     CDS             1228..1890
                     /locus_tag="VIY07_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381346.1"
                     /translation="MHPVLRLYEDVLSNADKSGFRLPPAPRFIFVVHGTAAIGDQPVN
                     EGEAWQGETAVTVKPSAAGVTCWRWELARGDQGAVTANAPGMITHEKLSAFLETMPKG
                     DLLMRGDSVAFPPGGCAYLHRHQGPGIRCLIEGGIRIDTHGRSTSFGPGGAWYESGPE
                     AVFAQAAPDKPSRFIRVMILPRELQGKSSIQYVNEDDKAKPKSQQYKIYADAPISFEA
                     RK"
BASE COUNT          401 a          546 c          627 g          361 t
ORIGIN      
        1 cgcgaggctg agtgcgtggc gatcgacccc gcggaccaca atgcggtgat cgcattcgcc
       61 aaggaccgaa aaatcgaact ggtcgtgatc gggccggaag tgccgttgtg tgccgggatc
      121 gtcgacgatc tggaagccgc cggcatcaag gcatttggtc cgaccaaatg ggcagcgcga
      181 ctcgaaggct cgaaaggctt caccaaggac ctgtgcaagg ccaataacat tcccacagcc
      241 gcttacgaac gcttcaaagg cgcgagcgcg gcgaaggatt acgtccgcaa aaaaggcgct
      301 cccatcgttg tgaaagccga cgggcttgcc gccgggaaag gcgttgttgt tgcggaaacg
      361 atcgcggagg ccgaggcggc catcgacatg atgttcggcg gcggtctcgg cgctcctgct
      421 tgggagatcg tggtcgagga atgcctcgtc ggcgaagagg cctcgttttt cgcgctttgt
      481 gacggggaga ccgctatcca gcttgcgtcg gcgcaagacc acaagcgcgt cgacgacggc
      541 gacaagggtc cgaacacggg tggcatgggc gcatattcgc ctgcaccggt catgaccgag
      601 gatatgaatc ggcgcgtgat ggacgagatc atccatccca ccgtgcgagc gcttaaacgt
      661 gccggcgcgc cgtacaaggg cgtgctgttt gccggattga tgattaccaa ggagggcccg
      721 aagctcatcg aatacaatgt gcgtttcgga gacccggaat gccaggtcct gatgctgcgc
      781 ctgatgtccg acctggtgcc tgcgcttctc gcagcgcgcg acggacagct aaagaatttt
      841 gatttgcgct ggtatcccga cgccgcgctg acggtggtaa tggcagcgaa aggctatccg
      901 ggcaactaca acaaaggttc gaccattgtg ggtctcgatg cggccgcgca gatcgagggc
      961 gtgcagattt ttcatgccgg cacgaaggcc gatggcggcc ggattgtcgc caatggcggg
     1021 cgcgtgctca atgtctctgc gcgcggcaag accgttcgcg aggcgcaagc ccgcgcttat
     1081 gccgccatcg atcgcatcaa ttggcctgac ggcttttgcc gccgcgatat tggctggcgc
     1141 gccattgagc gggagaagta aactttattc acgatagacg aacggcaatg cagaaccgtt
     1201 cgcgaattgg agggcaggag atcgataatg catccggtgt tgcggcttta cgaagatgtc
     1261 ctttcgaacg ccgacaaatc cggatttcga ctgccgcccg cgccccgctt tatttttgtc
     1321 gtgcacggga ccgccgcaat cggcgatcaa ccggtgaacg aaggcgaagc ctggcagggt
     1381 gagaccgcag tcacggtcaa gccgagtgcg gctggcgtca cgtgctggcg gtgggaactc
     1441 gcccgcggcg atcagggcgc cgtcaccgcc aacgcgccag gcatgatcac gcatgaaaaa
     1501 ttgagtgctt ttctggaaac gatgccgaag ggcgatcttt tgatgcgcgg cgatagtgtc
     1561 gctttcccgc ctggcggatg cgcctatctg catcgccacc agggcccagg aatacggtgt
     1621 ctgatcgagg gtggcatacg catcgatacc cacggccggt cgacgtcgtt cggccctgga
     1681 ggcgcgtggt atgaatccgg tccggaggcg gtgttcgctc aagccgcgcc tgacaagcca
     1741 agccgcttta ttcgcgtgat gatcctgccg cgcgaactcc agggcaaaag ctcaattcaa
     1801 tatgtgaacg aagacgacaa ggcgaagccc aagtcacagc agtataagat ctacgcggat
     1861 gcgccgatct cgttcgaagc gcggaaatga ttccaggcga tgacgtcgat cgaccgacag
     1921 caggcttttt cgggc
//
LOCUS       DATDHO010000316         1793 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_411380, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000316 DATDHO010000000
VERSION     DATDHO010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411380"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..715)
                     /locus_tag="VIY07_06030"
     CDS             complement(<1..715)
                     /locus_tag="VIY07_06030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007801178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY6381347.1"
                     /translation="MKAYRKIVLGLIALFAAAIVMASMPAAAQQQQQQRRPNILVIMG
                     DDVGWFNIGAYHQGIMSGKTPNLDKLASEGMRFTDYYAEASCTAGRANFITGQLPIRT
                     GLTTVGQAGADVGIPAQAVTLATVLRAQGYVTGQFGKNHLGDLNKFLPTLHGFDEFFG
                     YLYHLDAMSDPYWFSFPVDEKYYNTYGPRSLVRSFATDRDDPTEMPRWGKIGKQRVVD
                     EGPLPPFPNMSNVQNMHDIP"
     gene            complement(905..1645)
                     /locus_tag="VIY07_06035"
     CDS             complement(905..1645)
                     /locus_tag="VIY07_06035"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEY6381348.1"
                     /translation="MHRLVYFALILLGLVPVQSRGETACIDSALLAHSTVGITRYFDN
                     AERAAQPDLLGIQGTGWFRSPTSLVTVEHVVAAMGLSTEEWKVLTIQDVAESHSIPVR
                     IQRVAGAGPEKLAVLELQTAISTARSVPIRMSPLVPDDRIVTMAYPNRQRRAVTGRFV
                     QYATDGKLAGTGLLEIYEGNNRLVIDHGASGAPVFDCEGRIAAVISTVITQIFRTPFG
                     EQRISTAWGTPNVVSVPIRELVGSLESQ"
BASE COUNT          366 a          510 c          538 g          379 t
ORIGIN      
        1 aagggatgtc gtgcatgttc tgcacgttcg acatgttcgg gaacggcggg aggggacctt
       61 catcgacgac cctctgtttg ccgatcttgc cccagcgcgg catctcggtg ggatcgtccc
      121 ggtccgtcgc aaagctgcgg accaggctgc gtggaccgta cgtgttgtag tacttctcgt
      181 cgaccgggaa ggagaaccag tacggatcgg acattgcatc gaggtggtac aggtatccga
      241 aaaattcatc gaagccgtgc aacgtcggga gaaatttgtt caggtcaccg agatggttct
      301 tgccgaattg cccggtgaca tagccctgcg ctctcagaac agtggcgagt gtcactgcct
      361 gtgccgggat accgacgtcc gccccagcct ggcccaccgt tgtcaggccc gtacgtatcg
      421 gcaactgacc ggtaatgaaa ttcgcccgac cggccgtgca gcttgcttcg gcatagtagt
      481 cggtgaaccg cattccttcg gaggcgagct tgtcgaggtt cggcgtcttg ccggacatga
      541 tcccttggtg ataggcgccg atattgaacc agcctacatc gtcgcccatg atgacgagga
      601 tgttgggtct tcgctgctgt tgttgctgct gtgcggcagc cggcatgctc gccatcacga
      661 tcgctgcggc gaacagcgca atcaaaccga gcacaatttt tctgtaggcc ttcatgatcg
      721 aatttccttc gcgttattca aggttgaatg caccgcatct gctgacggtg aacccgcggg
      781 aaatttgagc cctgaacggc gggaataata ttgacctttg gggcaatgca acggtttgac
      841 ggtattaccg ccgcgtaaat agagccaatg cgcttaatgt gacggggccg tcgcgccgac
      901 gcgctcactg gctttcgaga gaccccacca gctcgcggat cggcacggac acgacgttgg
      961 gcgtgcccca ggctgtcgaa atgcgttgct cgccgaatgg cgtgcggaaa atctgcgtga
     1021 tcacagtgct gatcacggct gcgatccggc cttcgcaatc gaacacaggt gcgccggaag
     1081 cgccgtggtc gatgacgaga cggttattcc cctcgtatat ttcaagaaga ccggtacccg
     1141 cgagtttgcc atcggttgcg tattgcacaa agcggccagt tacagcgcgc cgttggcgat
     1201 tgggataggc catcgtcacg atgcgatcgt ccggcacgag cggcgacatc cggatcggga
     1261 cgctgcgcgc ggtggagatc gcggtttgca gttcaagcac ggccagcttt tccggcccgg
     1321 cacccgccac gcgctgaatg cgaacaggaa tcgaatggct ctcggcgacg tcctggattg
     1381 tgagaacctt ccattcctcg gtggaaagcc ccattgcggc gacgacatgt tcgacggtta
     1441 cgagactggt gggcgaccgg aaccagccgg tgccctggat accaagcaag tcgggttgcg
     1501 ctgcgcgctc cgcgttgtcg aagtatcgcg taatgcctac cgttgaatgg gccagcagcg
     1561 ctgaatcaat gcatgccgtt tcgccgcgcg actggacagg aaccaaaccg agcaaaatca
     1621 gcgcaaagta aaccagccgg tgcattccga taatcgcccc ttcccctatc caaaaggagc
     1681 gtagaatcgg gaatgcaaca agaacggttg gccgattatc cgaagaaatt cactggcgtt
     1741 cgcgtttttt tcgccgagag tcactttttt gcgacgcact cacgatctcc gct
//
LOCUS       DATDHO010000317         3239 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_411413, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000317 DATDHO010000000
VERSION     DATDHO010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3239)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3239)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3239
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411413"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1028
                     /locus_tag="VIY07_06040"
     CDS             <1..1028
                     /locus_tag="VIY07_06040"
                     /inference="COORDINATES: protein motif:HMM:NF039736.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF6352 family protein"
                     /protein_id="HEY6381349.1"
                     /translation="GRARAQMNDFWISSGHHLLDRDENRGLHVTDEFLKLYLARPELL
                     PPPEACAVERTLHASLMADPCRPIASSDIKLIADADARENWQLLIDFRDHLLRHKTLE
                     AAFSALVRKGMSNVPPLFINQLVHVILRNALDGVADTRVLRAAELFFRTQRVTLHDGS
                     LIVADEETIGGLNATPVTPLVSMLGIPAEANIDIINAENARNYWQRSDQFDMALDLTA
                     GREGLEALAQAMQHWIDHLIGVGVTIEPLKELNDINLVWYVGLDADGTKIGDMLWHGE
                     DIDETTMSRVIGLFRLNFHDPELMLEKIKGEPVYLILAMTSDKTIRMKPQNLLTSLPI
                     RHLEPVS"
     gene            1025..1534
                     /locus_tag="VIY07_06045"
     CDS             1025..1534
                     /locus_tag="VIY07_06045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3305 domain-containing protein"
                     /protein_id="HEY6381350.1"
                     /translation="MTALVTIPVGVVVERSKSASQWVDFHWRPVGVLSGVPEASPWTK
                     LSDDGERATFYAGAMQVELFRTETANYRENLRLEPPLLWITLRPVDGDPPYELASVTA
                     DPAEGEAMSEAGANVVETVAMPISMQETIAAFVAEHHVEREFVKRKRDRADPEALARR
                     GPSAREDHK"
     gene            1531..2187
                     /locus_tag="VIY07_06050"
     CDS             1531..2187
                     /locus_tag="VIY07_06050"
                     /inference="COORDINATES: protein motif:HMM:NF023176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3306 domain-containing protein"
                     /protein_id="HEY6381351.1"
                     /translation="MNDRENFISRWSRRKREAADEKAQGEQPGIADAAKETDRSASLN
                     SEESKLANADAAEFDPASLPPIESIEAGTDISAFLRDGVPSELRHAALRRAWSADASI
                     RDFVGLNENYWSDVTGPAGVAGFGDLDPGVDVKRMVSELFGESPSKKAEHDSSNASAA
                     SAAVPRPTSEPKPASVPDQNTTEGDRSDATKIAASQNNPADDPVEQRATRRHGSALPE
                     "
     gene            2292..3068
                     /locus_tag="VIY07_06055"
     CDS             2292..3068
                     /locus_tag="VIY07_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HEY6381352.1"
                     /translation="MREPGLMEAIRAAGGVGQLARQIGISQPSVSNWTRVPAERVVSV
                     EAVTGVDRSVLRPDLYGGKELSGEVDEVDLARAQEYALLAALLMRAPDAGFLAKISEL
                     RADASPLGLAHAALAEAAERTTAEKVEREYFDLFIGLGRGELMPYGSYYLTGFMLERP
                     LARLRDDLAKIGIDRAEGVVEPEDHAGILCEIMSGLASRRLPVPSGSDRMIFDKHMAP
                     WIGRFFNDLENAAAADFYKRVGALGRVYVNIEAEAFDLPT"
BASE COUNT          695 a          907 c          999 g          638 t
ORIGIN      
        1 acggtcgagc gagagcgcaa atgaacgatt tctggatttc cagcggtcac catctgctcg
       61 atcgggacga gaatagaggc ctgcacgtga ccgacgagtt cctgaaattg tatctcgcca
      121 ggccggaatt gctgccgcca cccgaggctt gcgcggtcga gcgcacgctg cacgccagct
      181 tgatggccga tccgtgtcgg ccaatcgctt catcggacat aaagctcatc gccgatgcgg
      241 atgcgcgcga aaattggcag ctgctgatcg acttccgcga tcatttgctg cggcacaaga
      301 cacttgaggc tgctttcagc gctcttgtgc gcaaaggaat gagcaacgtt cctccgctct
      361 tcatcaatca gcttgtacat gtgattctgc gcaatgcgct cgatggcgtc gcggatacac
      421 gtgtgttgcg cgccgccgag ctgttcttcc gcacccagcg cgtcactctc cacgatggct
      481 cactgattgt cgccgacgaa gagacgatcg gcggtctgaa tgcgacgccg gtgactccgc
      541 ttgtgtcgat gctcggcatt cccgccgagg ctaatatcga tatcattaac gccgagaatg
      601 cgcgcaacta ttggcagcgc agcgatcagt tcgacatggc actcgatctg actgcgggtc
      661 gtgaaggact cgaggcgctc gcgcaggcga tgcagcactg gatcgaccac ctgattgggg
      721 taggtgtcac catcgagccg ttgaaggaac tgaatgacat taatctcgtc tggtatgtcg
      781 ggctcgacgc cgatggcacc aaaatcgggg acatgctctg gcacggagaa gatattgatg
      841 aaacgaccat gtcccgtgtg atcggattgt ttcggctgaa ctttcacgac cccgagctca
      901 tgcttgagaa gataaaaggc gaaccggttt acctgatcct ggcgatgacg tctgacaaga
      961 ccatccgcat gaaaccccag aatctgttga ccagtctgcc cattcggcat ctggagccag
     1021 taagttgacc gcacttgtga ccattccagt cggcgtcgtt gtggagcgca gcaagagcgc
     1081 cagtcagtgg gtggactttc attggcgtcc ggtcggcgtg cttagcggag ttccggaggc
     1141 atcgccgtgg accaaactgt ccgacgacgg cgaacgcgcg acattctatg cgggtgcaat
     1201 gcaggtcgag ctgttccgaa cggaaactgc caactataga gagaacctgc gcctggaacc
     1261 gccgctgctg tggatcacgt tgcggcccgt cgatggcgat ccgccctatg aattggcatc
     1321 ggttaccgcc gatccggcag aaggcgaagc catgtctgaa gccggcgcca atgtggttga
     1381 aacggtggca atgccaattt cgatgcagga gacgattgca gccttcgttg ccgagcacca
     1441 cgttgagcgg gaattcgtga aaagaaagcg cgaccgcgct gacccggaag cactggcacg
     1501 tcgaggcccg tcggcgcgtg aggatcacaa atgaacgatc gtgaaaattt catcagccgc
     1561 tggtcgcgcc gtaagcgcga agctgccgat gaaaaagccc aaggcgaaca gccaggcatt
     1621 gcggacgcgg ccaaggagac tgatcggagc gccagtctga actccgaaga atccaaactg
     1681 gcgaacgcgg acgctgccga attcgatccg gccagcctgc cgccaattga atcgatcgag
     1741 gcaggcaccg acatctccgc gttcttgcgg gacggcgtgc cgtcggagct taggcatgcg
     1801 gcccttcgtc gcgcctggtc tgccgatgca tcaattcgcg actttgtcgg tctgaatgaa
     1861 aactactgga gtgatgtgac ggggcccgcc ggagtcgccg gcttcggcga tcttgatccc
     1921 ggtgtcgacg tcaagcggat ggtctcggag ttgttcggcg aaagcccctc aaagaaggct
     1981 gaacatgatt cttcaaatgc ttctgctgcc tcagcagcgg ttccgcgccc gacgagtgaa
     2041 ccaaagcctg cgagcgtgcc ggaccagaat accaccgagg gtgatcgatc cgacgctacc
     2101 aagattgctg catcgcaaaa caatcccgcc gacgatccgg tagagcagcg cgctacgcga
     2161 cgtcatggct ccgcgctgcc ggaatgaaaa tcgcgcagga ttgtttgcgc ttatagcctc
     2221 aagctattga cccgacttgc ggtgggccgg tacgctttca gtgtgataat tcaaaacaag
     2281 aacaaagtgt gatgagggaa cccgggctaa tggaagcgat tcgcgccgct ggcggcgtgg
     2341 gtcagcttgc acgccaaata ggcatttccc aaccgtcggt atcgaactgg actcgcgtgc
     2401 cggccgaaag ggtcgtttcc gttgaagcag tcacgggggt cgaccgttcc gtgctgcggc
     2461 cggatctcta cggtgggaaa gagctatcag gggaggtcga cgaagtagat ctcgcccgag
     2521 cgcaggaata tgcgctgctc gccgcgttgc tcatgcgtgc gcccgatgca ggcttcttgg
     2581 caaagatatc cgagttgcgt gccgatgcct caccgctcgg cttggcacat gctgcgctgg
     2641 ctgaagctgc agaaagaacc acagccgaaa aggtcgagcg cgaatatttc gatcttttta
     2701 tcgggctcgg ccgcggcgag ttgatgcctt acggctcgta ctaccttacc gggttcatgc
     2761 tcgagcggcc gctggcgcga ttgcgcgacg atctggcgaa aatcgggatt gatcgcgccg
     2821 aaggtgtcgt cgagccggaa gatcatgccg gcattctgtg cgaaataatg tcgggtcttg
     2881 cgagccgaag gctgccggtg ccgtctggct ccgaccgcat gatcttcgac aagcacatgg
     2941 ctccatggat cggtcgattc tttaacgacc ttgaaaatgc cgcagccgca gatttctaca
     3001 agcgggtggg agcactcggc cgcgtgtacg tgaacattga agcggaggcc ttcgatctgc
     3061 cgacttgaga cagtcgaagg aaaactggac gaattcgagg agagaacggc gatgaaagaa
     3121 catgaaaagt caaaggtggg tcgtcgcgac ttcctgcgtg caatgggcgc aggcgcgggt
     3181 ctggcggtag cgacggccgc gccgctcgcg accgaagccg ctgcggccga aaccgatgc
//
LOCUS       DATDHO010000318         7256 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_163594, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000318 DATDHO010000000
VERSION     DATDHO010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7256
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163594"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1546
                     /locus_tag="VIY07_06060"
     CDS             <1..1546
                     /locus_tag="VIY07_06060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HEY6381353.1"
                     /translation="VKLVSEVGVGTVAAGVSKARADHVTIAGFEGGTGASPLTSIKHA
                     GSPWEIGLAETHQTLVVNRLRGRISVQVDGGIRTGRDVAVGALLGADEFGFATAPLIA
                     AGCVMMRKCHLNTCPVGVATQDPVLRKRFRGQPEHVINYFFFVAEEVRELMAALGFRT
                     FNEMVGQMQMLDRRKLVEHWKAKGLDFSKLFTKPPAEKGTAIYKCEPQDHKIKDILDR
                     KLIAESQAALDRGAPVRLQAVIRNTDRACGGMLSGEVAKRYGHEGLPDDTIYVRFTGT
                     AGQSFGAWLARGITFELDGDANDYVGKGLSGGRLIIRSPADSGVVPEESIIVGNTVLY
                     GAIEGQCYFRGVAGERFAVRNSGAIAVIEGAGDHCCEYMTGGIVVVLGRTGRNFAAGM
                     SGGVAYVLDEDGTFKSRCNMAMIELEPVPEEEQIAQQEFGHYNDLESHGRVDVMSDLT
                     IKDAERLKLLIVNHARYTGSKRAAEILANWDTYRPLFRKVMPVEYRRALAEMAKEKAA
                     TMQAAE"
     gene            1548..2990
                     /locus_tag="VIY07_06065"
     CDS             1548..2990
                     /locus_tag="VIY07_06065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEY6381354.1"
                     /translation="MGKVTGFLEIEREDRDYQPVAERVKHWREFVLPLPEKELRNQAA
                     RCMDCGVPYCHGTSRITGAPTGCPVNNQIPDWNDLVYRGNWEEAARNLHSTNNFPEFT
                     GRVCPAPCEASCTLNIDENPVTIKTIECEIADRAIAQGLKPDKPQRTTGKKVAIVGSG
                     PAGLACAQQLARAGHEVHVYERWAKAGGLLRYGIPDFKMEKIHVDRRIEQMQGEGVVF
                     HYNADVGVNVPAEKLVKDHDAVVLTGGSEKPRDLPIPGRELKGIHFAMDFLPQQNRRV
                     SNEPQGDVEPILAKGKKVVVIGGGDTGSDCIGTSIRQGAVSVTNFEIMPEPPERENKM
                     LTWPDWPLKLRISSSHEEGVSREFAVLTQNFSGENGRVTKLHCTHVDAAFKPVPGTEF
                     EVEGDLVLLAMGFVHPVHEGMLKDLGVALDPRGNVSADTTAYQTSLPNVFAAGDMRRG
                     QSLVVWAIREGRQAAHAVDKFLMGTTTLPR"
     gene            complement(2994..4604)
                     /locus_tag="VIY07_06070"
     CDS             complement(2994..4604)
                     /locus_tag="VIY07_06070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEY6381355.1"
                     /translation="MTGKHRFSRWLLGAALFAAADCAAVIAIETALVSPAQAQFPFFG
                     GQQQQRSRSGGGFFGGLFGGFDRHSEPYEQQQAPVDNSRAPPPRKADPKADPITVTTS
                     VVVLGDAMADWLAYGMEDAFSDSPEIAIVRKNKLHSGLIRYEQKGDLDWGRVARDILA
                     QEKANYVVMMLGVSDRQSIRERDTAKEAEKKKGKDHKDQKDQKDQADKPAAEKEAQSK
                     EQFGEQETAAAAPETQPGKKTGGVAEFRTDQWAEIYSKRIDDTIAALKSKGVPVFWVG
                     LPSMRGAKATADTVYLNDLYRARAERAGVVYIDIWDGFVDESGKYSNFGPDYEGQVRR
                     LRSQDGVYFTKFGALKLAHYVAREIRRHMNSRVTPVALPSGPLAPTAPDGKPAARPVA
                     GPVIPLTVLPGNSEELLGGAGNSSPQGDAIATRVLVKGEPVEAPRGRADNFALQPGHD
                     DSSAAPLAVTPAGSLAAAPAEAARIEPAAAEAASSPEKKTSAPKTTTAERTAQNTASR
                     PRPPRPPQRDDVPRPPLGIPFGGGWPFR"
     gene            complement(4721..6049)
                     /locus_tag="VIY07_06075"
     CDS             complement(4721..6049)
                     /locus_tag="VIY07_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEY6381356.1"
                     /translation="MRTAWPFLIGAAIVAAGCGFVAAQDAADGRSPVTTGTLPPTAQA
                     APPWSGESGASGHPLMTADAIRAAAANFRDCIERLWPAAAHRGVSRSVFQKYAGSLTP
                     DLRIMDLLDNQPEFTKSFWDYLDILVNPERIEQGRALLEKYRGTFDAVERAYGVDRYT
                     IAAIWGVETNYGTLIGERPVIRSTATLACIGRRQNFFREEFLSTLEILQRGDVRPDHL
                     VGSWAGAFGPTQFMPTSFKKYAVDFDRDGRRDVVDSLPDIIASTANNLKQDGWIPGRS
                     WGYEVVVPTTFNFLLADHARPMSIREWERHGIRRANGQPFARSDDQAFLLVPAGIQGP
                     GFLMLANFNVIMKYNPAEAYALAIGHLADRLRGSGPFVQEWPRYERVLSRVERLELQQ
                     LLSRHGFDVGEPDGLLGVKTRSAIREFQVKNGRIPDGFASAGVLDQLRAR"
     gene            6200..7081
                     /gene="galU"
                     /locus_tag="VIY07_06080"
     CDS             6200..7081
                     /gene="galU"
                     /locus_tag="VIY07_06080"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEY6381357.1"
                     /translation="MTHIRKAIFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQHVVDE
                     ARQAGIEHFIFVTGRNKSVIEDHFDRQFELELTLIERGKKTELALLSEDLPEAGTVSF
                     TRQQSPLGLGHAVWCARELVGHEPFALLLPDVLVQHTRGCLAQMIDAAKQLDANANIV
                     AVEKVPRERVHMYGVVGVGAPKGKAFAITKMVEKPKASEAPSNLSITGRYILQPQIFE
                     LLEKQAAGTGGEIQLTDAMLALSHSQPFYGLEFEGRSFDCGSKIGFLAANVAYGLERA
                     DIAPDLRTEMRRLLDGK"
     gene            complement(7101..>7256)
                     /locus_tag="VIY07_06085"
     CDS             complement(7101..>7256)
                     /locus_tag="VIY07_06085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEY6381358.1"
                     /translation="LETLEEIAMENAEIFRHAGGESFAAIPCLNDTPGGMAVIRDIVA
                     RELKGWA"
BASE COUNT         1408 a         2237 c         2272 g         1339 t
ORIGIN      
        1 ggtcaagctt gtctccgagg tcggcgtcgg caccgtcgct gccggcgttt cgaaggcgcg
       61 cgccgatcac gtcacgatcg ctggcttcga gggtggtacg ggcgcaagcc cgctgacctc
      121 gatcaagcat gcgggcagcc catgggaaat cggcctcgcc gagacgcatc agacgctggt
      181 cgtcaaccgc ctgcgtggcc gcatctcggt tcaggtggac ggcggtatcc gcaccggccg
      241 ggacgtggcg gttggcgcgc tgttgggcgc agacgagttt ggcttcgcga ccgcgccgct
      301 gatcgcggcc ggctgcgtca tgatgcgcaa gtgccacctc aatacttgcc cggtgggcgt
      361 cgccacccag gatccggtgc tgcgcaagcg cttcagaggc cagcccgagc acgtcatcaa
      421 ttactttttc tttgttgccg aagaagtgcg ggagctgatg gccgcgctcg gattccgcac
      481 cttcaatgaa atggtcgggc agatgcagat gctcgatcgc cggaaactcg tggagcattg
      541 gaaggccaaa ggcctcgatt tctccaagct gttcacgaag ccgccagccg aaaagggcac
      601 ggccatctac aagtgcgaac cgcaggatca caagattaag gacattctcg atcgcaagct
      661 catcgcagaa tcgcaggccg cccttgatcg tggtgcgcca gtgcggcttc aggccgtcat
      721 ccgcaatacc gatcgcgcct gtggcggcat gctctccggt gaagtggcca agcgctatgg
      781 ccacgaaggc ttgccggacg acaccattta cgtccgcttc accggcacgg cagggcaaag
      841 cttcggcgcc tggcttgccc gcggcatcac cttcgagctt gacggcgacg ccaacgatta
      901 tgtcggcaag ggcctgtccg gcggacgcct catcatccgc tccccggcgg actcaggtgt
      961 tgtgccggag gaatcgatca tcgtcggcaa taccgttctc tacggcgcaa tcgaaggcca
     1021 atgctatttc cggggtgttg ccggcgaacg cttcgccgtg cgcaattccg gcgccatcgc
     1081 ggtgatcgag ggtgccggcg accactgctg cgaatacatg acgggcggca ttgtcgtggt
     1141 gctggggcga acaggccgca attttgcggc aggcatgtca ggcggcgtcg cctacgtgct
     1201 ggacgaggac ggaacattca agtcgcgctg taacatggcc atgatcgagc tcgagccggt
     1261 gcccgaagaa gagcaaatcg ctcagcagga gttcggccac tacaacgatc tcgaaagtca
     1321 tgggcgcgtc gacgtcatgt cagacctgac gatcaaagac gccgaacggc tgaaattgct
     1381 gatcgtcaat cacgcgcgct acaccggatc gaagcgcgcc gctgaaatcc ttgctaactg
     1441 ggatacctat cgcccgctat tccgcaaagt gatgccggtc gaataccgcc gcgcgctggc
     1501 cgaaatggca aaggagaagg ccgcgacgat gcaggccgcg gaatagtatg ggtaaggtca
     1561 ccgggtttct ggaaatcgag cgtgaggatc gcgactatca accggtcgcg gagcgcgtga
     1621 agcattggcg cgaattcgtg ctgccgcttc cggaaaagga acttcgcaat caagccgcgc
     1681 gctgcatgga ttgtggcgtg ccctattgtc atggcaccag ccgcatcacc ggcgcgccga
     1741 ccggctgccc ggtcaacaac cagattccgg actggaacga tctggtctat cgcggcaact
     1801 gggaggaagc cgcgcgcaat ctgcattcaa ccaacaattt tccggagttc accggccgag
     1861 tgtgtccggc gccgtgcgag gcatcgtgca cgctcaacat cgacgagaat cccgtcacca
     1921 tcaagacaat cgagtgcgag atcgcagacc gcgcgatcgc tcagggtctc aagcccgaca
     1981 agccgcaacg cacgaccggc aaaaaagtag cgattgtcgg atcagggccg gcgggccttg
     2041 cgtgcgcgca acagctcgcg cgtgccggcc atgaggtgca tgtctacgaa cgctgggcga
     2101 aagcgggcgg actgctccgt tacggcattc ccgatttcaa gatggaaaag atccacgtcg
     2161 accgccgcat cgagcagatg cagggcgaag gcgtcgtctt ccactacaac gcagatgtcg
     2221 gcgtaaacgt cccggcggag aaattggtca aagaccacga tgccgtcgtg ctgaccggcg
     2281 gaagcgagaa gccgcgcgat ctgccgatcc ccggccgcga gctgaaagga attcatttcg
     2341 cgatggattt tctgccgcag cagaaccggc gcgtgagtaa tgagccgcag ggtgacgtcg
     2401 agccaattct cgccaagggc aagaaggtcg ttgtcatcgg cgggggcgat acgggttccg
     2461 actgcatcgg gacctcgatc cgccagggcg cggtttcggt caccaacttc gagatcatgc
     2521 cggagccccc cgagcgggaa aacaagatgc tcacgtggcc ggattggccg ctcaagctcc
     2581 gcatctcttc cagccacgag gaaggcgttt cccgcgagtt cgcagtcctg acgcaaaatt
     2641 tttccggcga gaacggccgg gtgacgaagc ttcattgcac gcatgtggat gcagcattca
     2701 aacccgtgcc cggcaccgag ttcgaggtcg agggcgatct ggttctcctc gccatgggtt
     2761 tcgtgcaccc ggtgcacgag ggcatgctga aggaccttgg cgtggcccta gacccgcgcg
     2821 gcaacgtatc cgcggacacc acggcgtatc agacgtcact gccgaatgtg ttcgctgccg
     2881 gcgacatgcg ccgcggacag tcactggtgg tttgggccat ccgcgaaggc cgtcaggccg
     2941 cgcacgccgt cgacaaattc ctgatgggaa caacgacgct gccgcgctga ggttcagcga
     3001 aacggccagc ctccgccgaa gggaatgccc aggggtggac gaggcacgtc atcccgttgc
     3061 gggggacgcg gcggcctggg cctgctggcc gtattctgcg cagttcgctc ggctgtggtg
     3121 gttttcggtg cggaggtctt tttctccgga gaagacgccg cctcggcggc tgctggctcg
     3181 atgcgcgcag cttcagcggg tgccgccgcg agggagcctg ccggcgtcac cgccagcgga
     3241 gccgctgagc tgtcatcgtg gccaggctgg agggcgaaat tgtcggcccg tccgcgcgga
     3301 gcctcgaccg gctctccctt gacaagaacg cgcgtggcga ttgcgtcgcc ctgcggtgag
     3361 ctgttgccgg cgccgccgag caattcctcg gagtttccgg gcaggacggt cagggggatc
     3421 acaggccccg ccaccggccg ggcggccggc ttgccgtcgg gcgccgtggg cgcgagcggg
     3481 ccggaaggaa gcgcaaccgg cgtcacgcgg ctgttcatgt gacgccgaat ttcgcgcgcg
     3541 acatagtgcg caagcttcag cgcaccgaat tttgtgaagt aaacaccatc ttgcgaccga
     3601 agcctgcgta cctggccttc gtagtcgggg ccaaagttcg aatatttgcc ggattcgtcg
     3661 acgaagccat cccagatatc gatatagacg acgccggcgc gttcggcgcg ggcgcggtaa
     3721 agatcattga gatagaccgt gtcagccgtg gccttggcgc cgcgcatcga gggcaagcct
     3781 acccaaaaga ccggcacgcc cttgcttttg agggcggcga tcgtgtcatc gatacgcttg
     3841 gaataaatct ccgcccattg atcggtgcga aactcagcga ctccaccggt ctttttgcct
     3901 ggctgtgtct ccggcgcagc tgcggcggtc tcctgttcgc caaactgttc cttgctttgc
     3961 gcttcctttt cggcggcagg cttgtccgcc tgatcctttt gatccttttg atccttgtga
     4021 tccttgccct tctttttttc ggcttccttg gcggtgtcgc gctcccggat cgactgccgg
     4081 tcgctgacgc caagcatcat cacaacgtaa ttcgccttct cctgcgcgag gatgtcgcgc
     4141 gcaacgcgtc cccagtcgag atcgcctttc tgctcatacc ggatgagccc ggaatgaagc
     4201 ttgttcttgc ggacgatcgc gatctcgggc gaatcggaaa atgcatcttc cattccgtag
     4261 gccagccagt ccgccatggc atcgccaagg acgacaaccg acgtcgtcac ggtaatcggg
     4321 tctgctttcg gatccgcctt gcgtggcggt ggcgcgcgag agttatcgac cggcgcctgc
     4381 tgctgttcgt aaggctcaga gtgacgatca aagcctccga acaatccacc aaaaaatccg
     4441 cctccggagc gcgaacgctg ctgctgttgt ccgccgaaaa acggaaattg cgcctgagct
     4501 ggcgatacca gagcggtttc gatggcgatg acggcggcgc agtcggccgc ggcgaacagc
     4561 gccgcaccga ggagccaacg cgaaaaccgg tgtttgccag tcatgctgac cgctcactgc
     4621 gtgacgaatt cggcgtgtgt gaaggcttgc cctcgccgcc caccgccatg gactaacagc
     4681 gccagcgaaa tgtcaactca aagttggcga aataccatcg ttaacgcgcc cgcaattgat
     4741 cgagcacgcc cgcggaggcg aacccgtccg gaattcggcc gtttttgacc tggaattcgc
     4801 gaatcgcgga acgggtcttg acgccgagaa gcccgtccgg ctcgccgaca tcaaagccgt
     4861 ggcgcgaaag cagttgctgc agttccagcc tctcgacccg cgacaacacg cgctcgtacc
     4921 gtggccattc ctggacaaag gggccgctgc cccgcagccg gtcggccaga tgtccgatcg
     4981 cgagcgcata ggcctcggca ggattgtatt tcatgatgac gttgaaattg gcgagcatca
     5041 ggaaacccgg tccctggata ccggccggga cgaggaggaa agcctgatca tcggaccggg
     5101 caaacggctg gccgttcgcg cgcctgatcc cgtgccgctc ccactcgcga atgctcatcg
     5161 gccgcgcgtg atcggcaagc aggaagttga acgtcgtcgg caccaccacc tcgtagcccc
     5221 agctgcggcc cgggatccaa ccatcctgct tcaggttgtt ggcggtggaa gcaatgatgt
     5281 ccggcagcga atcgacgacg tcgcggcgtc catcgcggtc aaagtccacc gcatatttct
     5341 tgaacgaggt aggcatgaac tgagtcgggc cgaatgcacc ggcccaggaa ccgaccagat
     5401 gatcggggcg gacatcgccg cgttggagaa tttcgagcgt cgagagaaat tcctcgcgga
     5461 aaaagttttg cctccggccg atgcaggcaa gggtggcggt tgaacgaatc acaggccgtt
     5521 cgccgatgag tgttccgtag ttggtttcga cgccccagat cgccgcgatc gtgtagcgat
     5581 cgacaccata ggcgcgttcc acggcgtcaa aggtcccgcg atatttctcg agcagcgcgc
     5641 ggccctgctc gatccgctcg gggttcacca agatgtccag gtaatcccaa aaggacttgg
     5701 tgaactcggg ctggttgtcg agcaaatcca tgattcgcag gtcgggtgtc agcgaaccgg
     5761 catatttctg gaacacgctt cgcgagacgc cgcggtgcgc ggcggcgggc catagccgtt
     5821 caatgcagtc gcggaaattt gcggccgcgg cgcgaatggc gtccgccgtc atcagcgggt
     5881 gaccggacgc gcccgattcc ccgctccacg gcggcgctgc ctgcgccgtc ggcggcagag
     5941 tgccggtcgt gaccggagaa cggccatccg ccgcgtcctg tgccgccaca aagccacaac
     6001 cggccgccac gatcgctgcg ccgatcaaaa aaggccaagc tgtgcgcatt ccctcccctc
     6061 gacccataac ccgatagcct gaatatatgg ctgacccgat atcatttcag cagcgttaat
     6121 ggtgtagttt cttggcagaa acatgctttt ctagcggccg ccatggcgtc ccgacgcata
     6181 tgaccctgaa aatcctcgca tgacacatat tcgaaaagcc atatttcccg tcgccgggct
     6241 tggaacccgc tttttgccgg cgaccaaggc catgccaaaa gaaatgctac cagtggtcga
     6301 ccggccgctc attcagcacg ttgtggacga ggcacggcag gccgggatcg agcacttcat
     6361 ctttgtgacc ggtcgaaaca agagcgtgat cgaggaccat ttcgaccgcc agttcgaact
     6421 cgagttgacc ttgatagagc gcggaaagaa gaccgagctc gcgctgctgt cggaggacct
     6481 ccctgaggcc ggcaccgtca gcttcacccg ccagcaatct ccgctcggcc ttgggcacgc
     6541 ggtgtggtgc gcgcgggagt tggttggcca tgaaccgttc gcgctgttgt tgccggacgt
     6601 cctcgtccag cacacccgag gatgcctcgc gcagatgatc gacgcggcga agcaactcga
     6661 cgccaatgcc aatatcgttg ccgttgagaa ggtgccgcgg gagcgggtcc acatgtacgg
     6721 cgttgtcggc gttggcgctc cgaaggggaa agcgtttgcg atcaccaaga tggttgaaaa
     6781 gccgaaagcg agcgaagcgc cgtccaatct ttcgattacc ggacgataca tcctgcagcc
     6841 gcagattttt gagctgctgg aaaagcaggc ggccggcacc ggcggcgaga ttcagctcac
     6901 cgacgccatg ctcgcgctgt cacattccca acctttctat ggtcttgaat tcgaggggcg
     6961 cagcttcgac tgcggctcca agatcggctt cctcgcggcc aatgtggcct acggcctcga
     7021 gcgtgcagat atcgcgccag acttgcgcac cgaaatgcgc cgcctgctcg atggcaaata
     7081 gcggccgacc gaatatgtga tcaagcccaa cccttgagtt cgcgggcgac gatgtcgcgg
     7141 attaccgcca tgccgccggg cgtatcattg aggcagggga tagcggcgaa actttccccg
     7201 ccggcatgcc ggaagatctc ggcattctcc atggcgatct cctcgagggt ctcaag
//
LOCUS       DATDHO010000319         1767 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_213145, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000319 DATDHO010000000
VERSION     DATDHO010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1767)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1767)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1767
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213145"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VIY07_06090"
     CDS             complement(<1..260)
                     /locus_tag="VIY07_06090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381359.1"
                     /translation="MRTFIAISCAVIGASILSFPALAQQKTVKACEAEWRANKDANQA
                     QGITLKAYVTRCRAGASAAQPSQPATTTAAAPAAAGQKTVKT"
     gene            complement(291..533)
                     /locus_tag="VIY07_06095"
     CDS             complement(291..533)
                     /locus_tag="VIY07_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381360.1"
                     /translation="MKRIFVALLITSFSVGTAMAQSCATKAVSKEGKPLTGAAKTSFI
                     KKCKEDACESKAVSKDGKPLSGAAKTSFMKKCERAA"
     gene            complement(744..1163)
                     /locus_tag="VIY07_06100"
     CDS             complement(744..1163)
                     /locus_tag="VIY07_06100"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6381361.1"
                     /translation="MPRAPIRVAIVDDEPAVRTALARLLEASSFETATYGSAREFIDS
                     MRRGLPECLIVDVHMPDFSGLDLQRYLNRIDKKIPTIVITAFDDAGIRERSAASGAKA
                     FLTKPLHGPTLIDAIMNAMMDSREEGAAVLKKNGTNQ"
     gene            complement(1249..>1767)
                     /locus_tag="VIY07_06105"
     CDS             complement(1249..>1767)
                     /locus_tag="VIY07_06105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR C-terminal-related transcriptional
                     regulator"
                     /protein_id="HEY6381362.1"
                     /translation="EFLSSHDPAVPGCAIIDLVMSELDGLHLQQALIDTGSDRPIIFL
                     TGKGDISASVKAMKAGAVDFLTKPVQREALFSAVKRAANVDAVSRQRRNESKSIGERI
                     STLTHREREVLEYVIAGRLNKQIAASLGTVEKTVKVHRGRMMAKLGVRTVADLVRLAD
                     KAGIAPAHSMVG"
BASE COUNT          324 a          530 c          519 g          394 t
ORIGIN      
        1 catgtcttga ccgttttttg tcccgccgca gccggcgctg ctgctgttgt cgtcgccggc
       61 tgtgagggtt gcgcggcgct agcccccgcg cggcaccgcg tgacgtaggc cttcagggtt
      121 attccctggg cctggttcgc atccttgttg gcccgccatt cagcctcgca ggccttgact
      181 gtcttttgct gcgcaagagc cggaaaagac agaattgacg cgccgataac ggcgcagctg
      241 atcgcgatga aggttcgcat gtcttaactc ctggcttgag ccggcagcga ctacgccgcc
      301 cgttcgcact ttttcatgaa gctggttttt gccgctccgg agagcggctt gccgtccttg
      361 ctgacggctt tcgactcgca cgcatcctcc ttgcacttct tgatgaagct cgtcttggcc
      421 gcgccggtca gaggcttgcc ttccttgctc acggccttgg tggcgcagga ctgcgccatc
      481 gctgtcccga ctgaaaaaga cgtgatcagg agagcgacga aaatgcgttt cattattacc
      541 tccgtatgtt gcagtgcgat tgaaagcatc cgcagcattt tggagaaaac tgccgcacgc
      601 cgcactgcgg ggttccgcga gcaaccaaac tccgcaattc tcgaagagtt ccgctctgtc
      661 ggcaggataa ttttctagga tcagccggtt cgccgtgaag ttggaccgtg gtccaacgag
      721 gatcacgcgg ccgctgccgc gtcttattga ttggtcccgt tcttcttcaa aacggcggca
      781 ccctcttccc gggaatccat catcgcgttc atgatggcgt cgatcagcgt cgggccatgc
      841 agcggcttgg tgaggaaggc cttcgcgccg gatgccgcgc ttcgctcgcg aatgcctgca
      901 tcgtcgaatg ccgtaatgac gattgtcgga atctttttgt cgatgcggtt gagataccgc
      961 tgcagatcga gcccgctgaa gtccggcata tgcacgtcga cgatgagaca ctcgggcaag
     1021 ccgcgtcgca tggaatcgat gaactcccgc gccgaaccat aggtcgccgt ctcaaaggac
     1081 gacgcctcaa gcaggcgagc cagggcggtg cgcactgctg gctcgtcgtc gacgattgca
     1141 acccgtatgg gggctcttgg catatcgccg aaagtgtcag gcaaacggat aagcccgtcg
     1201 agttgcccta agggcctaca tcgtcggttt cccaacgtag tgtgtcggct atcccaccat
     1261 ggagtgggca ggcgcaattc cggctttgtc agccagccgg accaggtcgg caaccgtacg
     1321 aacaccaagc ttagccatca tgcgcccgcg gtggactttg actgtctttt ccacggtccc
     1381 gaggctggcg gcgatctgct tgttcagccg gccggcgatg acgtattcca gtacttccct
     1441 ttcgcgatgg gtcagggtgg aaatgcgctc gccgatcgat ttcgattcat tgcgtctctg
     1501 gcgcgacaca gcatccacat tggccgcgcg cttcactgcg gaaaaaagcg cttcgcgctg
     1561 gaccggtttg gtgagaaaat cgacggcgcc cgccttcatg gcttttacgc ttgccgaaat
     1621 atcacccttg cccgtcaaaa aaattatcgg ccggtccgaa cccgtgtcga tcagagcctg
     1681 ctgcagatgc aggccgtcga gttcagacat gacaaggtcg atgattgcac agccggggac
     1741 ggccgggtca tgcgacgaca gaaattc
//
LOCUS       DATDHO010000320         2442 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_263154, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000320 DATDHO010000000
VERSION     DATDHO010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263154"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..635
                     /locus_tag="VIY07_06110"
     CDS             <1..635
                     /locus_tag="VIY07_06110"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009061 - anaerobic respiration [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HEY6381363.1"
                     /translation="RFVHWMTATCFIILALSGLNITFGKPLLLPLLGPEAFTTWSELA
                     KYAHNYLSFPFTIGVVLIFLIWIGGNIPNRVDVEWVKRGGGIVGHDHPPAYRFNAGQK
                     MIYWIVVIGGGASAVTGYLLLFPFYGTGIEGMQVAQVVHAVVAMLFIAAMLAHIYIGT
                     VGMEGAFEAMGEGTVDVNWAREHHRLWLEDELARTGPNESRRQPMATPAE"
     gene            700..1233
                     /gene="mobB"
                     /locus_tag="VIY07_06115"
     CDS             700..1233
                     /gene="mobB"
                     /locus_tag="VIY07_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEY6381364.1"
                     /translation="MRIIGLAGWSGSGKTTLITKLIPRLIARGVKVSTLKHAHHGFDL
                     DQPGKDSFFHRAAGATEVIISSAKRWAILHELREEPEWDLGGLVAKMSPVDLVLVEGF
                     KRDVFPKLEIHRAANGKPLIHPDDPHIVAIASDIALPQAKVPVIDLNDIEAIAELLLK
                     RAVPVGAAEATAAARSR"
     gene            1233..>2442
                     /gene="glp"
                     /locus_tag="VIY07_06120"
     CDS             1233..>2442
                     /gene="glp"
                     /locus_tag="VIY07_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEY6381365.1"
                     /translation="MAQLTDDCFAFSGPLLRLDDMERLIADRIEPVPESERVPLHGAR
                     GRVVAHDVKAPVDLPPFDNSAVDGYAVRHADLRPDAETTLAVVGRLTAGTGTQLALKP
                     GQAIRIFTGAAMPKGADTVFMQEDVTVADERVTVPKGLKLGANRRVAGEDVPAGAVVF
                     PAGTVLEAQHIALAAALGMTDITVRRRLKVAVFSTGDEVVEPGSKRGEAAIYDSNRFL
                     LTELLERLGVIVTDLGILADDPERLSLRLRESANAHDLIVTTGGVSTGEADYVRSAVE
                     GIGRLVFWRVAIKPGRPVALGVIPAASGHSAALVGLPGNPVAVFVTFVHVVKPLLRRL
                     SGARPDRLIPLPVRVAFAYKKKKDRREYVRVALQRAADGEIEAVKHPQDGAGILTSLT
                     ETDGLLEFPEE"
BASE COUNT          448 a          729 c          768 g          497 t
ORIGIN      
        1 aacgctttgt tcactggatg acggcaacct gctttatcat cctggcgctg tcgggcctca
       61 acatcacgtt tggcaagccg ctgctgctgc cattgctcgg gcctgaagct ttcacgacct
      121 ggtcggagct cgcgaagtat gcgcacaatt atctgagctt ccccttcacc atcggtgtag
      181 tgctgatctt cctgatatgg atcggcggga atatccccaa ccgcgtcgat gtcgaatggg
      241 tcaagcgtgg cggtggcatc gtcggacatg accatcctcc cgcgtaccga ttcaatgcgg
      301 gccagaagat gatctactgg atcgtggtga tcggcggcgg tgcctcggcg gtgaccggat
      361 atctgctgct gttccccttc tacgggaccg gcatcgaagg aatgcaggta gctcaggttg
      421 tgcacgcggt cgtcgccatg ctgttcatcg ccgccatgct tgcccacatc tacatcggca
      481 ccgtcggcat ggaaggcgct ttcgaggcga tgggcgaagg cacggtggat gtcaattggg
      541 cgagggaaca tcaccggctg tggctggagg acgagttggc gcgcacagga ccgaacgagt
      601 cccggcgcca gccaatggca acccccgccg aatagcgcag ttaaatacct tccaaaacgc
      661 ccggcctttg cggtcgggcg ttttgctata tagggcacca tgcgcattat cggcctcgcc
      721 ggctggagcg gttctggcaa aaccacgctg atcaccaagc tgatcccgcg tctgatcgcg
      781 cgcggggtga aagtctcgac gctcaagcac gcgcatcatg gctttgacct cgatcagccc
      841 ggcaaggact ctttcttcca tcgcgcggcc ggcgccaccg aagtcattat ttcatcggcc
      901 aagcgctggg ccatcctgca tgagctgcgc gaggagcccg aatgggatct gggcggcctg
      961 gtggccaaga tgtctcccgt cgacctggtg ctggtcgagg ggttcaaacg cgacgtcttt
     1021 ccgaaactgg aaatccatcg cgcagcgaac ggcaagccgc ttatccatcc cgatgacccg
     1081 cacattgtcg cgatcgcttc tgacattgcg ctgccgcagg caaaggtccc cgtcattgac
     1141 ctcaatgata tcgaggcgat cgccgagctg ttgctgaagc gtgccgtgcc ggtcggtgca
     1201 gcagaagcga ctgcagctgc aaggagccgc tgatggcgca gctcaccgac gattgcttcg
     1261 ctttttcggg accgctgttg cgcctcgacg acatggaacg gctgatcgcg gatcggatcg
     1321 agccagttcc cgagtccgag cgcgttccgt tgcatggagc gcgaggccgt gtcgtcgccc
     1381 atgatgtcaa agcgccagtc gatttgccgc ctttcgacaa ttcggccgtc gatgggtacg
     1441 ccgtgcggca cgccgatttg cgacccgatg ccgaaaccac gctcgctgtt gtgggtcgcc
     1501 tgactgcagg cacgggcacc caacttgcgc tcaaaccggg gcaagcgatt cgcattttta
     1561 ccggcgccgc catgcccaaa ggcgcggaca ccgtcttcat gcaagaagat gtgacagttg
     1621 ccgacgaacg agtgacggtg cctaaaggac ttaagctcgg cgccaaccgc cgtgtcgcgg
     1681 gcgaagacgt gccagccggc gccgtggtgt tcccggctgg aacggtgttg gaggcccagc
     1741 acattgccct cgctgctgcg ctcgggatga ccgacatcac tgtgcgccgg cggttgaaag
     1801 ttgcggtgtt ttcgaccggc gacgaagttg tggagcccgg ctcgaaacga ggcgaagctg
     1861 cgatctatga ttccaatcgc tttctactta cggagttgct ggagcggctc ggcgtgatcg
     1921 ttacggatct cgggattctc gccgacgatc cggaaagatt atcgctcagg ttgcgggaat
     1981 cagcgaacgc ccacgatctc atcgtgacca cgggtggcgt atcaaccggc gaggctgact
     2041 atgtgcgcag cgcggtcgag ggcattggca ggcttgtgtt ctggcgtgtc gccatcaagc
     2101 cgggtcgacc tgttgcgctt ggcgtgattc cagcggcatc cggacacagc gcagcactcg
     2161 tgggattgcc cggcaacccg gtggccgtct tcgtcacatt cgtgcatgtt gtgaagccgc
     2221 tgttgcgccg gctttcgggt gcgcgcccgg accggctcat accgctgccc gtgcgagtgg
     2281 cttttgccta caagaaaaag aaggatcgcc gcgaatatgt ccgcgtggca ctccagcgtg
     2341 ccgccgacgg cgaaatagag gcggtcaagc atccgcagga cggtgctgga attctcacct
     2401 cgttgactga aacagatggc ttgctggaat tcccggagga gg
//
LOCUS       DATDHO010000321         3059 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_458682, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000321 DATDHO010000000
VERSION     DATDHO010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3059)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3059)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3059
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_458682"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1431)
                     /gene="acnA"
                     /locus_tag="VIY07_06125"
     CDS             complement(<1..1431)
                     /gene="acnA"
                     /locus_tag="VIY07_06125"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEY6381366.1"
                     /translation="MTSLDNFRCCKTLQIGSKTYAYFSLPTAERSGLKGISRLPFSMK
                     VLLENLLRNEDGRTVTKDDIKAVAEWLKTKTSDREIAFRPARVLMQDFTGVPAVVDLA
                     AMRDAMKQLGGDPKKINPQVPVDLVIDHSVAVTFFGNNAAFKKNVEEEYRQNQERYKF
                     LKWAQRSFDNFRVVPPGTGICHQVNLEYLSRVVWNRKDKVKVDGKTVTMEVAYPDTLV
                     GTDSHTTMVNGLSVLGWGVGGIEAEAAMLGQPLSMVLPEVIGFRLAGKLKEGVTATDL
                     VLTVTEMLRKRGVVGKFVEFFGPGLEYLTIADRATLGNMSPEYGATCGFSPIDDDTIR
                     YMKDTGRPSDLVALVAAYAKAQGMYRVKTTPDPLFTDVLKLELSSVEPSLAGPKRPQD
                     RVALKEVKAGFAQSLDKEFGKSAEAKKRVKVSGKNYDLGHGDVVIAAITSCTNTSNPN
                     VMIGAGLLARKAAAKGLAAKPWVKTSL"
     gene            1685..2284
                     /gene="ccmA"
                     /locus_tag="VIY07_06130"
     CDS             1685..2284
                     /gene="ccmA"
                     /locus_tag="VIY07_06130"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HEY6381367.1"
                     /translation="MQLKAENLSCNRGGREVFRDLSFGVQTSEAMVVTGRNGAGKSSL
                     LRMIAGLVRIASGRLSLEGGEPDIPIGEQAHYLGHQDAFKPTLTVGQNLQFWSGFLGD
                     GRTVERALHAVDLAPLTDLPAAVLAAGPRRRLSIARLLAVPRPIWLLDEPTSSLDAPS
                     QQRLAELMHVHLVDGGMIIAAAHGAIGLERARELKLGLA"
     gene            2281..2949
                     /gene="ccmB"
                     /locus_tag="VIY07_06135"
     CDS             2281..2949
                     /gene="ccmB"
                     /locus_tag="VIY07_06135"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HEY6381368.1"
                     /translation="MRSFNALLVRDVQLATRVGGGALMGALFFLIVVTMIPFAIGPDL
                     ALLRRIGPAILWLGALLASLLALDRLFAADQDDGSLDLLMMAAMPLELTVATKAIAHW
                     ITTGLPLVVIAPLLGLMLNVELHAAGWLALTLAAGTPALTFIGLVGAALSVALRRGGL
                     LLAVLVLPLTVPVLIFGVAAANAAILGSGPFGPPFTILCALSLVGLVLGPIAAAAALR
                     HGLE"
BASE COUNT          530 a          909 c          923 g          697 t
ORIGIN      
        1 aagcgaggtc ttgacccagg gcttcgcggc caggcctttc gccgcagcct tgcgggcgag
       61 caggccggcg ccgatcatca cattgggatt ggaggtattg gtgcaggatg tgatcgccgc
      121 gatgacgaca tcgccatgcc caagatcata gttcttgcct gaaaccttga cgcgcttctt
      181 ggcctcggcg ctcttgccga attccttatc cagcgactgc gcaaagcctg ccttgacttc
      241 ctttaatgct acccggtcct gcggacgctt cggcccggcg agcgacggct cgaccgagct
      301 caattccagc ttcagcacgt ccgtgaaaag cggatcgggc gtcgttttca cccgatacat
      361 gccctgggct ttcgcatagg ccgcgaccag tgcaaccaga tcggagggac ggcccgtgtc
      421 tttcatgtag cggatcgtat cgtcgtcgat cggcgagaac ccgcatgtag cgccgtattc
      481 cggcgacatg ttgccgagtg tcgcccggtc ggcaatggtg agatactcca gtcccgggcc
      541 aaagaattcg acgaactttc cgaccacgcc gcgcttgcgg agcatctcgg tgaccgtcag
      601 cacgagatcg gtggcggtga caccctcttt cagcttgccg gccagcctga agccgatcac
      661 ctcgggcagc accattgaca gcggctgacc gagcatcgct gcctccgctt cgatgccgcc
      721 gacgccccaa ccgagcacgg agaggccatt caccatggtc gtgtgcgaat cggtgcccac
      781 cagagtgtcg ggataggcaa cctccatggt cacggtcttt ccgtcgacct tcaccttatc
      841 cttgcggttc cagacaacgc gcgagagata ttcaaggttg acctgatggc agatgccggt
      901 ccctggcggc acgactctga aattgtcgaa tgatcgctgc gcccatttca ggaatttgta
      961 gcgctcctga ttctgccgat attcctcctc gacgtttttc ttgaaggcag cgttgttgcc
     1021 gaagaaggtg accgccactg aatgatcgat gaccaggtcg acgggcactt gcgggttgat
     1081 tttctttgga tcgccgccga gctgcttcat cgcatcgcgc atggcggcaa gatcaacgac
     1141 tgcaggcacg ccggtaaaat cctgcatcag cacgcgagcg gggcggaatg ctatctcccg
     1201 gtcggaagtt ttggtcttga gccactcggc aacggccttg atgtcgtctt tggtgacggt
     1261 gcgcccatcc tcgttgcgca acaaattctc gagcagcact ttcatcgaaa agggcaagcg
     1321 agaaattccc ttgaggccgc ttcgctcggc cgtgggaaga ctgaagtacg cgtacgtctt
     1381 gctgccaatc tgaagcgtct tgcagcatct gaagttgtcg agcgaagtca tttgagcgtt
     1441 tccattcccg gccggttgag cggcgctggt tcggactaag ctattggcaa ggcggagttt
     1501 ttcttgctgg cgagacttgc gtccgaattc gaattacgta acgtcgcagt tcggggctta
     1561 taagggcttt tcttgcgata cgctacattg accggggaac cgcgccaaaa atgctcgtaa
     1621 aatcggggtt ttccgcctcc cgtgcagtcc tgacctcctc ggcgaatggg cggccgcacc
     1681 ggtgatgcaa ctcaaagctg aaaacctgtc ctgcaatcga ggcgggcgcg aggtcttccg
     1741 ggacctgagc ttcggcgtac aaacgagcga agcgatggtg gtaaccggcc gcaacggggc
     1801 tggaaaatcc tccctgctgc ggatgattgc cggcttggtc cggatcgcct cgggtcggct
     1861 cagtcttgaa ggcggcgaac ccgacattcc gataggcgag caggcccact atctcggtca
     1921 ccaggacgcg ttcaagccta cgcttacggt tggccagaac ctgcaattct ggagtggatt
     1981 tctcggtgac ggtcgcaccg tcgaaagggc actgcacgct gtggatcttg caccgctgac
     2041 agatttgcct gccgctgttc tcgcggccgg cccgcggcgc cgactatcga ttgctcgtct
     2101 cttggcggtg ccgcggccga tttggctgct tgacgagccg acgtcttcgc ttgatgcgcc
     2161 atcgcagcag cgcctcgcgg agctgatgca cgttcacttg gtcgatggcg ggatgatcat
     2221 cgcggctgca catggcgcga ttggtctgga acgcgcacgt gagctgaaat taggcttggc
     2281 atgagatcgt tcaacgcgct tcttgtccgt gacgtgcaac tggcgactcg tgtcggcgga
     2341 ggcgcgctca tgggcgcgtt attttttctg atcgtggtca ccatgatccc tttcgcaatc
     2401 ggtcccgatc tcgcgctgct caggcgtatc ggaccggcaa tcctttggct tggtgcattg
     2461 ctcgcgagct tgcttgccct cgaccggcta tttgccgccg accaggatga tggctcgctc
     2521 gatctcctga tgatggcggc aatgccgctc gaattgacgg ttgccacgaa agcgatcgcg
     2581 cactggatca cgactggatt gccgctggtg gtgatcgccc ccctgctcgg gttgatgctc
     2641 aatgtcgagt tgcacgcggc tggctggctg gcgctgactc tcgccgcggg cacgccggcg
     2701 ctcaccttca tcggtctggt tggcgctgcg ctctcggttg ccctgcgccg cggtggcttg
     2761 ctgcttgcag tattggtgct gcctctcact gtcccggtgc tgatcttcgg tgttgccgcc
     2821 gcgaatgcgg cgatccttgg atccgggcca tttggtccac ctttcaccat cctttgtgcg
     2881 ctaagtttgg ttggcttggt gcttggcccg attgcggcag cggcagcact acgacacgga
     2941 ctggaatgac atacatgagg acagtagcga cattgatgag aaaccgcgca tgccgatgat
     3001 cgatcttgcg aacccgtcgc gctttttgag tttcgtcaac cggctgctgc cctggctga
//
LOCUS       DATDHO010000322         5599 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_213161, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000322 DATDHO010000000
VERSION     DATDHO010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5599
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213161"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            264..446
                     /locus_tag="VIY07_06140"
     CDS             264..446
                     /locus_tag="VIY07_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2093 domain-containing protein"
                     /protein_id="HEY6381369.1"
                     /translation="MNGEAEVKYLDGDFRVVRPGAFVRCAVTGVPIPLEELKYWSVDL
                     QEAYATPEAVLQRHRG"
     gene            complement(468..1469)
                     /gene="lpxK"
                     /locus_tag="VIY07_06145"
     CDS             complement(468..1469)
                     /gene="lpxK"
                     /locus_tag="VIY07_06145"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEY6381370.1"
                     /translation="MMREPAFWWRKAGFTAGMLGPLGRIYGAVAARRMSATGARAGIP
                     VICVGNFTLGGAGKTPTVMMLAGLFASAGKRAFCLSRGYGGDVAGAKLVDVHADNAAQ
                     VGDEALLIAHVAPVIVARDRVAGAALAREHGAELIIMDDGLQNPSLMKDFTLAVVDAR
                     RGIGNGLVFPAGPLRAPLAAQLAQADGLLVVGDGNNAETVSDQCRSRGLPVFHGHLVP
                     DPAAVESLKGRRVLAFAGIGDPEKFFATAVEAGIEVAQRCAFADHHRFTAEEAAELIM
                     QAEHSGLALLTTEKDHARMAGDPLLEALALRSHTLRVSLVVEQADELQRFMTSSLRH"
     gene            complement(1459..2763)
                     /locus_tag="VIY07_06150"
     CDS             complement(1459..2763)
                     /locus_tag="VIY07_06150"
                     /EC_number="2.4.99.12"
                     /EC_number="2.4.99.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HEY6381371.1"
                     /translation="MSGKLPTGLRMYRLLSAAAGPFTPILLARRLKRGKEHKQRLPER
                     RGESRIARPDGPLVWLHGASVGELASVLPLIDRIRARGIGMLVTTGTVTSGGLAEQRL
                     HRGVIHQFVPLDISRFVRRFLNHWHPDLALFVESELWPNMMVEASARGIPMILVNGRL
                     SELSFKRWRRAPNSIASLLRRLDLCLAGTASDAARLSELGAANVVTTGNLKLDVPPPP
                     ADSAALERLQNAVGRRPVIAAASTHTGEEQAIIEAHLRLRKNFPDLLTLIAPRHPDRG
                     PGIVGIAAAAGLAPSLRSRGELLSPTTQIYVVDTMGELGLVYRLASAVFIGGSLVKHG
                     GQNPIEAAKLSTAILHGPHVWNFGEIYAALDSARGAETVESVDRLTAHLAAWLADPDA
                     RARAAEAAGIVVRNLGGALDRTLASLDPYLMELQLRQRVHDA"
     gene            complement(2760..3416)
                     /locus_tag="VIY07_06155"
     CDS             complement(2760..3416)
                     /locus_tag="VIY07_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY6381372.1"
                     /translation="MAAASYLRLVWRTSRVTVEPADIYEQVEMPVILAMWHGQHFMAP
                     FIKKPGNPRHRAKVLISRHRDGEINARAAERLKIGTIRGSGAHDGGFHHKGGAVAFTE
                     MLEAIKDGYNIAMTADVPKVARRAGLGVVKLAQHSGRPIYGVAMASSRRVELDNWDRT
                     TINLPFGRMGVVASDPIFVPPDADRDALETARQRVESELNRVTRRAYEIADTTGSSGP
                     "
     gene            complement(3481..3732)
                     /locus_tag="VIY07_06160"
     CDS             complement(3481..3732)
                     /locus_tag="VIY07_06160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4170 domain-containing protein"
                     /protein_id="HEY6381373.1"
                     /translation="MSAELSKKQLLHLVLGGELTELGGNEFKDLDKIDIVGVFPNYAS
                     AYVAWKAKAQQTVDNAHMRYFIVHLHRLLDPDATSQPVR"
     gene            complement(3787..4542)
                     /locus_tag="VIY07_06165"
     CDS             complement(3787..4542)
                     /locus_tag="VIY07_06165"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HEY6381374.1"
                     /translation="MREAGERARATARQPFRRWTKGTEGSPVTEGDIVVNDFLHGQLS
                     KLVHSAAWLSEESHDDPPDRGSPLVWIVDPIDGTRAYISGRADWTISVALAEHGRPQI
                     AVLYAPVTDEMFLAVRDAGATLNGMPVHVSPGETLAGARLAGPKSYVDRLLRIAPAIV
                     LQPKVHSLALRIARVAQGSFEAALASGGSHDWDLAAADLLVHEAGGALTDFAGQEPKY
                     NEPRAAHGALVAAGRARHAAIIELVRDREIEFA"
     gene            complement(4577..>5599)
                     /locus_tag="VIY07_06170"
     CDS             complement(4577..>5599)
                     /locus_tag="VIY07_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HEY6381375.1"
                     /translation="AHDFPDLDLIDPKLPAVTELEAQARAAEEAALAVKGVSKSGGAS
                     ASAGIGGMVLVTSHGFRGAYIGSNHGLSVTAIAGEGTGMERDYDYSSVRHATDLESPE
                     KIGRNAGTRAVSRLNPRKVSTRKVPVVFDARSAGSLVSHLASAANGASVARKTSFLRD
                     KMGAKLFADGIHIIDDPLRRRGLRSHPFDGEGVACKRLALVENGVLRSWLLDSATARE
                     LGLVTTGNAQRGGSSVTTPGPSNMHLQPGHLAPDALIADIADGFYVTDLIGVGANMVT
                     GDYSRGASGFWIENGKRTYPVSEVTIAGNLLDMFRTLTPANDLEFRFATNAPTLRVEG
                     LTVAGQ"
BASE COUNT         1101 a         1747 c         1714 g         1037 t
ORIGIN      
        1 ttggcgccgg catgcggctc gacatcgaat tttccgatgg ccgtgtaggc gcgacaacag
       61 acggggaagg tgtgttgccg tctgcgaaaa gcaaggcccg cggtcgcggt ggcggcgagg
      121 ggcctgccgg ccagggcaac ctgttcggct cttgagcaaa attcgagggt ttcgctgacg
      181 cgggcgaacg attatgtttg gccggacaac ccgcttggaa tcggaggctt ctgttgctta
      241 accgctatga tcgtccgtcg ccgatgaacg gcgaggctga ggtaaaatac ctcgatggcg
      301 atttccgcgt cgtgcggccg ggtgccttcg tgcgctgcgc tgtgacaggg gtgccgattc
      361 cgcttgagga gctcaaatac tggagcgttg atctgcagga agcctatgcg acccccgagg
      421 cggtcctgca gcgccatcgg ggatagctcg tagccaaaaa gcagatgcta gtgcctgagg
      481 cttgacgtca taaaccgctg caattcatcg gcttgttcga ccactaagga tacgcgcaat
      541 gtatgcgatc gtaaggcgag agcctcgagc aaggggtcac cggccattcg tgcgtgatcc
      601 ttttcggtgg tgagaagtgc aagaccgctg tgctcggcct gcataatgag ctccgccgct
      661 tcttccgctg taaaacgatg atgatcagca aacgcgcaac gctgcgcgac ctcgatgccc
      721 gcctccacag cagtagcaaa gaacttttcg ggatcaccga tgcctgcaaa ggcaaggacg
      781 cgacgccctt tcaaagactc gacggcggct ggatcaggga cgaggtgccc gtgaaacacc
      841 ggaaggccgc gtgagcgaca ttgatccgac acagtctcgg cattgttgcc gtcgccaacc
      901 accagtaacc cgtcggcttg agcgagctgt gccgctaacg gggcccgcag tggtccggca
      961 gggaatacaa gcccgttgcc gatgccgcgt cgtgcatcga ccaccgcgag agtgaagtcc
     1021 ttcatcaagg aggggttctg tagtccgtca tccatgatta tgagctcagc gccatgctcg
     1081 cgcgccaggg cggcacccgc cacccggtct cgcgccacaa tgaccggcgc gacgtgggca
     1141 atcagcagcg cctcatcgcc aacctgagct gcattgtcgg cgtgaacatc cacaagcttg
     1201 gcacccgcga catcgccgcc ataacctcgg ctgagacaaa atgcgcgctt gccagcgctc
     1261 gcgaacaatc ctgccagcat catcaccgtt ggcgtcttcc ctgcgccgcc gagcgtgaaa
     1321 ttgcccacgc aaatgacagg aattccggct cgggctccgg ttgccgacat gcgcctcgct
     1381 gcaacggcgc cgtagatgcg ccccagcgga ccgagcatgc ctgcagtgaa gcccgccttg
     1441 cgccaccaga atgccggctc acgcatcatg gacccgttgt cgcaattgca gttccatcag
     1501 atagggatcg agcgatgcca gggtgcggtc cagtgcgcca cccaagttcc gcaccacgat
     1561 gccggccgct tcggccgcgc gcgcacgagc atcagggtcg gcgagccagg cggcgagatg
     1621 tgccgtcagg cgatcgacgc tttcgaccgt ttctgccccg cgcgcactgt cgagtgcggc
     1681 gtagatctcg ccgaaattcc agacatgcgg gccatgcagg attgcggtgc tcaacttggc
     1741 ggcctcaatc gggttttggc cgccgtgttt gaccagcgag ccgccaatga acacggcaga
     1801 tgccagccga tagacgaggc cgagttctcc catcgtgtcc acgacataaa tctgcgtcgt
     1861 ggggctgagc agctcccctc gcgagcgcag gcttggcgcg agacctgcgg cggccgcgat
     1921 cccgacgatt cccgggccgc ggtcaggatg acgcggggcg atcagagtca acaaatcagg
     1981 aaaattcttg cgcaggcgga gatgagcttc gatgatcgcc tgttcctcgc cagtatgggt
     2041 cgaagcggct gcaataaccg gacggcggcc taccgcgttc tgcaatcttt cgagtgcagc
     2101 ggagtcggcg ggcggcggcg gcacgtcaag cttgagattg cctgtggtca ccacgttcgc
     2161 tgcacccaat tcgctcagtc gcgctgcatc cgaggccgtt ccagcaagac aaagatcgag
     2221 acgccgaagc aggctggcaa tggaattcgg cgcgcgcctc caacgcttga acgaaagttc
     2281 ggagagccgg ccattgacca gaatcatcgg gattccacgc gccgaggctt ccaccatcat
     2341 gttcggccaa agctcggact ccacgaacaa cgcgagatcc ggatgccagt ggttgagaaa
     2401 acgacgcacg aaccgggaaa tatcaagtgg aacgaattgg tggatcaccc cgcggtgcag
     2461 gcgctgctcg gccaggccgc ctgatgtgac agtgcccgtc gtgaccagca tgccgatccc
     2521 acgggcgcgg attcgatcga ttaaaggcaa gacactcgca agctcgccga cgctggcgcc
     2581 atgcagccag acaagggggc cgtccggccg cgcaatgcga ctttcaccac ggcgctcggg
     2641 cagacgctgc ttgtgttcct tgccgcgctt gagtcgtcgg gccaggagaa taggagtgaa
     2701 cggtcctgcc gccgcggaca acagccgata catccgcaaa ccggtcggca atttgccgct
     2761 caaggtccgc tgctccccgt cgtgtcagcg atctcgtaag cgcgtcttgt aactcgattg
     2821 agctcgcttt ccacccgttg gcgcgccgtc tccagcgcgt cacggtcagc atcgggcggc
     2881 acaaaaatgg ggtcgctcgc gaccactccc attcggccaa atgggaggtt aatcgtcgtg
     2941 cgatcccaat tgtcgagctc gacgcgccgg ctcgaagcca tcgccacccc atagatcggc
     3001 cgcccggagt gctgcgccag cttcaccaca cccagccccg cgcggcgtgc gacctttggt
     3061 acatcggcgg tcattgcgat attgtagccg tctttgatgg cctcaagcat ctccgtgaag
     3121 gccacggcgc cgcccttgtg gtgaaaaccg ccatcgtggg cgccggagcc ccgaatagtc
     3181 ccgattttca gtcgctcggc agcacgtgca ttgatctcgc cgtcgcggtg acgggagatc
     3241 agcaccttgg cgcgatggcg tggattaccc ggttttttaa taaacggtgc catgaaatgc
     3301 tggccatgcc acatcgcgag gatgaccggc atttctacct gttcgtagat atccgcaggt
     3361 tccaccgtga ccctgctcgt gcgccagacc agccgtagat acgaggctgc tgccatgccg
     3421 acagcctcgt gaaagacggg cgaagtgacg attttacgcc tgaaggaccg catcatcgtt
     3481 tcagcgcact ggctggctcg tggcgtccgg atcgagcagg cgatgcagat gcacgatgaa
     3541 ataacgcatg tgagcgttgt cgacagtctg ctgtgccttc gccttccagg caacataggc
     3601 actggcataa ttcgggaaca cgccgacaat gtcgattttg tccagatctt taaactcgtt
     3661 cccaccaagc tcggtaagct cgccgccgag gacgagatgc agcaattgtt tttttgacag
     3721 ttctgcggac acggatggac ccctggtcaa tgccccggcg gcgaatggac aatgtgattg
     3781 tcgagcttac gcgaattcga tttcgcggtc gcgcacgagc tcgattatgg cggcgtgacg
     3841 ggcccggccg gcagccacca gcgcgccatg cgccgctcgc ggctcattgt acttcggctc
     3901 ctgaccggcg aagtcggtga gcgcaccgcc ggcttcgtgc accaaaagat cggccgctgc
     3961 aaggtcccag tcgtgactgc cgcccgaggc caaagccgcc tcaaatgatc cttgcgcaac
     4021 ccgcgcaatc cgcagtgcaa gagaatgcac cttgggctga agcactatcg cgggtgcgat
     4081 tctcaacagc cgatcgacgt agctcttggg tcccgccagc ctggctccgg ccaaggtctc
     4141 gccgggggag acatggaccg gcatgccgtt gagcgttgca cctgcgtcgc gcacagcgag
     4201 aaacatttcg tcagtgaccg gcgcgtagag aaccgcaatc tgcggtcggc cgtgttcggc
     4261 cagcgcgacc gaaatggtcc agtcagcgcg acctgaaata taggcccggg ttccgtcgat
     4321 cggatcgacg atccagacca gtggcgagcc acgatcgggc ggatcgtcgt gcgattcctc
     4381 ggaaagccat gcggcactat gaacgagctt cgaaagctgt ccgtggagga aatcgttcac
     4441 cacgatatct ccttcggtca ccggtgagcc ttcggtgcct ttggtccatc gtctgaacgg
     4501 ctggcgcgcc gttgcacgcg cgcgctcccc ggcttcgcgc attatcgcct caagcggcgc
     4561 gcttaaagcg aggacatcat tgaccggcaa cggtcaagcc ctccacgcgc aatgtcgggg
     4621 catttgttgc aaagcgaaat tcaagatcat tggccggagt gagcgtgcgg aacatatcga
     4681 gcagattgcc cgcaatcgtg acctcgctca cggggtaggt gcgcttgcca ttttcaatcc
     4741 agaatccaga cgcgccgcga ctgtagtcgc cggttaccat gttcgctccc acgccgatga
     4801 gatcggtcac ataaaaacca tcggcgatgt ccgcgatcag cgcatctgga gccaagtggc
     4861 ccggctgcaa atgcatattg cttggtcctg gtgtcgttac agaagaaccg ccccgctggg
     4921 catttccggt cgtgacgagt ccgagttcgc gagcggtcgc gctgtcaagc agccacgagc
     4981 gcagtacgcc gttctcgacc agggcgagcc gcttgcaggc gacgccttcg ccgtcgaaag
     5041 ggtgtgagcg cagaccacgc ctgcgcaacg gatcgtcgat aatatgaatg ccatccgcga
     5101 acaacttggc gcccatcttg tcgcggagaa aactggtctt ccgcgcaacc gaagcgccgt
     5161 ttgccgcgct tgccagatgc gaaaccagcg agccggccga ccgcgcatcg aacacgaccg
     5221 gtaccttgcg ggtcgaaacc ttccttgggt taagccgcga gacggctcgg gtaccggcgt
     5281 tgcggccgat tttttcggga ctttcgagat cggtcgcgtg acgcacggag gaataatcgt
     5341 agtcgcgctc catcccggtg ccctcgccgg cgatcgcggt caccgaaagg ccgtggttcg
     5401 atccaatata ggcgccgcgg aaaccgtggc tggttaccag caccatcccg ccgatcccgg
     5461 ccgaagcaga agccccgccc gacttgctca cgcccttgac ggcaagagcc gcttcctcgg
     5521 cggctcgcgc ttgtgcttcg agctcggtca cggccggcag tttgggatcg atcaaatcga
     5581 ggtcaggaaa gtcgtgcgc
//
LOCUS       DATDHO010000323         3322 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_15399, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000323 DATDHO010000000
VERSION     DATDHO010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3322)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3322)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3322
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15399"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(63..953)
                     /locus_tag="VIY07_06175"
     CDS             complement(63..953)
                     /locus_tag="VIY07_06175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015886715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0018576 - catechol 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0009712 - catechol-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEY6381376.1"
                     /translation="MIIQRQEDVTGAVTEAFKNTQPPRLREILISLVTHLHAFARDVH
                     LTEEEFEKAVQYVARLGQKTDDKHNEVVLMSGSLGFSTLICLLNNGNNGQTETTANLL
                     GPFWRMHSPRTENGGSIVRSPTPGPALFVKCHVKDQNGKPIAGAEVDVWHSSPEGFYE
                     QQDPKQAPMNLRGKFMTDAEGHFAFRSVKPAGYPIPVDGPVGDLVRATGRHNYRPAHL
                     HFLIFKEGFKTLISQVYVNDDEKLETDVQFGVTRALVGNYVRHDEAAPAAGVTGDWYS
                     LDQTFVMEPGKSRLPKPPIQ"
     gene            complement(967..2958)
                     /gene="uvrC"
                     /locus_tag="VIY07_06180"
     CDS             complement(967..2958)
                     /gene="uvrC"
                     /locus_tag="VIY07_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEY6381377.1"
                     /translation="MNGINKDIDPASELREEDEESSLPEIELESVPTGTLTAGRAAIL
                     RFAKLAPSAPGVYRMIDSQGDVLYVGKAKSIKKRVTAYARPAGHDSRIARMIAATATL
                     EFVSTKTETEALLLEANLIKRLRPRFNVLLRDDKSFPFILITSDHWAPQILKHRGART
                     RPGRYYGPFASAGSVNRTINALERAFLLRSCSDSYFEARTRPCLLHQIKRCSAPCTGE
                     IDFAGYTQLVTEANEFLSGRSQSVQKELADEMDRASNALDFERAAIYRDRLAALSAIQ
                     SHQGINPRSIEEADVFAVHQAGGFSCVEVFFFRTGQNWGNRAYFPKADRTIGASEVLG
                     AFLAQFYDDKPAPRCILVSHDFEERELLAKALTAKSERKVEVVVPTRGERKELVEHAL
                     ANAREALGRKLAETSSQQKLLGAMTETFSLPRVPRRIEVYDNSHISGTNAVGAMIVAG
                     PEGFRKNQYRKFNIRSSDIAPGDDYGMLREVLQRRFKRLLEENPRAVAGDVDVVGGDG
                     EDQPWPDLVLIDGGQGQLKTAQETLSALGVTDVPLVAIAKGPDRDTGRETFFVPGRDP
                     FKLPPRDPLLYFIERLRDEAHRFAVGSHRVRRKKDIREAGLQEIPGIGPTRKRALLRH
                     FGTVKAIERASLPDLAQVPGINAETARKIYEFFHDSAAQ"
     gene            complement(3026..>3322)
                     /locus_tag="VIY07_06185"
     CDS             complement(3026..>3322)
                     /locus_tag="VIY07_06185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6381378.1"
                     /translation="TLSKAALQTATITLAQALAPRIRVNAVAPGPTLPSARQTDIQFA
                     AQAESLPLQRGPRPDDIAAAVIYLAQANTITGVTLPVDGGQHLSWRTPDSEVVE"
BASE COUNT          657 a         1007 c          962 g          696 t
ORIGIN      
        1 acacccatgc cgcggtcagg tcaaccgggc acagtgacca aatccccgct gattacgaca
       61 gattattgaa ttggtggctt cggaaggcgg cttttgcccg gctccatcac gaaagtctga
      121 tcgagcgaat accagtcgcc tgttacgccg gctgccgggg ctgcttcgtc gtgccgcacg
      181 taattgccga cgagggcgcg ggtcacgccg aactgcacgt ccgtctcgag tttctcatcg
      241 tcattgacat agacctgcga gataagagtt ttgaagcctt ccttgaaaat caaaaaatgc
      301 agatgagccg ggcgataatt gtgacgtccc gtggcgcgca ccagatcgcc gaccggaccg
      361 tcgaccggga tgggatagcc tgcgggctta acactgcgga aggcgaaatg accttcagca
      421 tcggtcatga attttccacg caaattcatt ggcgcctgct tgggatcctg ctgctcataa
      481 aatccttccg gagaggagtg ccatacatcg acttccgcgc cggcgatcgg cttcccgttc
      541 tggtccttga cgtggcactt gacgaacagc gctgggccgg gagtcgggga gcgcacgatc
      601 gaaccgccgt tttcggttcg gggtgaatgc atgcgccaga acggtccaag caggttggcc
      661 gtggtttcgg tctggccgtt gttgccattg ttcaggaggc agatcagcgt ggagaagccg
      721 agcgatcctg acatcagcac cacttcattg tgtttgtcgt cggttttctg tcccagcctg
      781 gcgacgtact ggactgcctt ctcgaactcc tcttctgtca ggtgcacatc gcgcgcgaac
      841 gcatgcagat gcgtcaccag cgatatcaga atttcccgca gccgcggagg ctgcgtgttc
      901 ttgaaggctt ccgtcaccgc cccggtgaca tcttcctggc gctgaataat cattactgct
      961 tcctgttcat tgagcggccg agtcgtggaa aaactcatat atctttcgcg cggtctccgc
     1021 attaattccg gggacctggg ccagatcggg cagactcgcc cgttcgattg ctttcacagt
     1081 gccaaaatgg cgcagcaagg cgcgtttgcg agtcggacca attccgggaa tttcctgcaa
     1141 acccgcttcg cgaatgtcct tcttgcgccg cacgcgatga gaccccacgg caaagcggtg
     1201 ggcctcatcc cgcagccgct cgatgaaata aagtaaggga tcccgtggcg gcaacttgaa
     1261 cgggtcgcga ccgggcacga aaaaagtctc ccggcccgta tcccgatccg gccccttcgc
     1321 aatcgccacc aatggcacat ccgtaacgcc aagtgcgctc agcgtttcct gcgcggtctt
     1381 gagttggcct tgacctccgt cgatcagcac cagatccggc cagggttgat cttcgccgtc
     1441 ccctccgacg acgtcgacat cgcccgcaac agcgcgcggg ttctcctcaa gcagtcgctt
     1501 gaaccgacgc tgaagtactt ctcgcagcat tccgtagtcg tcgcctggcg cgatatccga
     1561 tgagcggatg ttgaatttgc ggtactgatt tttgcgaaag ccctccggcc cggccacgat
     1621 catggcgccg accgcgttgg tgccgctgat gtggctgttg tcgtagacct cgatgcggcg
     1681 cggaacacgc ggcaaagaga atgtctccgt catcgcgccg agcaacttct gctgtgagga
     1741 tgtttcggca agcttgcgac ccagcgcctc acgcgcattg gccagcgcat gctcgaccaa
     1801 ttccttgcgc tcgccacgcg tcggaacgac gacttccact ttgcgctccg actttgccgt
     1861 aagcgccttt gcaagcaatt cacgttcctc gaaatcgtgc gatacgagaa tgcaacgtgg
     1921 ggccggcttg tcgtcataga actgtgcaag gaatgcgccc agaacctcgc tcgcgcctat
     1981 cgtacggtca gctttcggaa agtatgcgcg gttgccccag ttctgccctg tgcggaagaa
     2041 gaatacttcc acgcatgaga atccgcccgc ctgatgcaca gcgaatacat cggcctcttc
     2101 aatgctgcga ggattgatcc cctggtgaga ctgaattgcc gacaacgcgg caagccgatc
     2161 gcgataaatc gcagcgcgct cgaaatcgag agcatttgac gctctatcca tttcgtcggc
     2221 cagttccttc tgcaccgact ggctgcgccc ggagagaaac tcattggcct cagtcaccag
     2281 ctgcgtgtag ccggcaaaat cgatttctcc ggtgcaaggc gccgagcagc gcttgatctg
     2341 atggagcagg cacggtcttg tccgggcttc gaaatatgaa tccgagcagg agcgcaacag
     2401 gaatgcgcgt tcaagcgcat tgatcgtccg gttgaccgac ccggccgaag caaacggccc
     2461 atagtaacgc cccggtctcg tgcgagcgcc acgatgcttc aggatttgcg gcgcccaatg
     2521 gtcggaggtg atcaggataa acgggaaaga cttgtcgtcg cgtaacagca cattgaaacg
     2581 tggccgcaag cgtttgatca ggttggcttc gagcaggagc gcctcggtct ccgtcttggt
     2641 ggacacaaac tcgagcgtcg cggtcgccgc aatcatgcgc gcaatccggc tgtcgtgccc
     2701 ggcgggccgg gcatacgccg tcacacgctt tttgatgctc ttggctttgc cgacataaag
     2761 cacgtctcct tgcgaatcga tcatgcggta aacgcccgga gcagagggag ccaacttcgc
     2821 gaaccgcagg atcgcagcgc gcccggctgt aagcgtaccg gtgggcacgc tttcaagctc
     2881 gatttccggc aaggacgatt cctcgtcctc ctcgcgaagt tcgcttgccg gatcgatgtc
     2941 tttattgatg ccgttcatgg atacaagata atgcgcggat gacttttgcg catggtctta
     3001 tccgacggca aatgcaaggc gagtgctatt ccacaacctc gctgtccggg gtacgccagg
     3061 acagatgctg cccgccgtcg acaggaagcg tgaccccggt aatagtgttc gcctgcgcga
     3121 gatagatgac ggccgccgca atgtcgtccg gccgaggccc ccgctgaagc ggcaagctct
     3181 cagcctgcgc ggcaaactgt atatcggtct gacgcgcact cggcagagtc ggacccggcg
     3241 ccaccgcgtt cacacgaatc cgcggcgcca gcgcctgggc cagcgtgatc gtggctgttt
     3301 gcaacgcagc cttgctcaag gt
//
LOCUS       DATDHO010000324         2028 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_163888, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000324 DATDHO010000000
VERSION     DATDHO010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_163888"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..348)
                     /locus_tag="VIY07_06190"
     CDS             complement(<1..348)
                     /locus_tag="VIY07_06190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381379.1"
                     /translation="MRGKLFTILICAGTVVAFRSALAGEPIILREMGSFHVGGRVVEI
                     SGKPLKEVVFSAGGVPAKIDPNGLYQVEQMYVQYFLPQDRKGGLTGVTYEAPLTAGKA
                     GSIFSSARAGTSTI"
     gene            complement(449..1168)
                     /locus_tag="VIY07_06195"
     CDS             complement(449..1168)
                     /locus_tag="VIY07_06195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2470 domain-containing protein"
                     /protein_id="HEY6381380.1"
                     /translation="MKPDSAFDPRLAAKKLLREARSGALATLFPGSGDPYCSLVNVAT
                     SVDGAPLFLLSSLALHTKNMMADPRVSLMLDERKEGDPLEGARVMLMGKCAKTDSSAA
                     QPYLRRHPEAEMFANFGDFAFYRMEISRAHLVAGFGRIVDVRPQDLLADISDAEALIE
                     SETDAITHMNADHADACRLYATKLLGGSDGDWRCVGIDPEGLELQQGRTALRLPFPRR
                     VTAPGQLRAILKQLAEQARAT"
     gene            1323..2021
                     /locus_tag="VIY07_06200"
     CDS             1323..2021
                     /locus_tag="VIY07_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008385075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY6381381.1"
                     /translation="MPTIALVDDDRNILTSVSMALEAEGYRIMTYTDGASALDGFKTS
                     PPDLAILDIKMPRMDGMETLRRLRQKTDVPVIFLTSKDEEIDELFGLKMGADDFIRKP
                     FSQRLLVERVKAVLRRSSPKDGTPPKEVDSAKVLERGQLRMDPERHTCTWKGEPVTLT
                     VTEFLILQALATRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKVVDDDFE
                     MIETLYGVGYRFKE"
BASE COUNT          434 a          592 c          587 g          415 t
ORIGIN      
        1 aattgtagac gtcccagccc ttgcggatga aaatattgag ccagccttcc cggccgtcag
       61 gggtgcttca taggtcacgc cggtaagtcc gcccttgcgg tcctgcggca ggaaatactg
      121 cacatacatc tgctcgacct ggtacagacc gttcggatcg atcttggccg gcacaccgcc
      181 ggcgctgaac acgacctctt tcaggggctt tccggatatc tccacgaccc gtccaccgac
      241 gtggaaagat cccatctcgc gcaagatgat tggctctccg gccaatgccg atctgaacgc
      301 aacgaccgtg cccgcacaaa ttagaatcgt gaacagcttt ccgcgcattg tttcgctccc
      361 gggcgataag gattgaacga tagtctgagt catccgcaca agcttgacga aaatgcgccg
      421 gtcctgggcg gaccttgggc cagtgcgatc aagttgcccg ggcctgttcg gccagttgtt
      481 tcagaatggc acgcagctgg cccggcgcgg tgacccgtcg cgggaatggc aaccgcaacg
      541 ccgtccggcc ttgttgcagc tcgagacctt caggatcgat gccgacgcaa cgccagtctc
      601 catctgagcc gccgagcagt tttgtcgcat acaatcggca ggcgtctgca tgatctgcgt
      661 tcatgtgcgt gattgcgtcc gtttcggatt cgataagcgc ctcggcgtcc gagatgtcgg
      721 caagcagatc ttgcggtctg acatccacga tgcgtccaaa acccgcaacc aaatgcgcgc
      781 gggaaatttc catccgataa aatgcgaagt cgccaaagtt tgcgaacatc tcggcttcgg
      841 gatgacgacg caggtagggt tgcgcggccg aggaatccgt cttcgcacat ttgcccatca
      901 gcatgacgcg tgcgccttcg agcggatccc cctccttgcg ctcatcgagc atcagcgaaa
      961 cacgtgggtc ggccatcata ttctttgtgt gcagcgcgag gctcgacaac agaaaaagcg
     1021 gcgcgccatc gactgaggtc gcaacgttca ccagtgaaca atatggatcc cccgagccgg
     1081 ggaacaatgt cgcaagcgct ccggagcgtg cctcgcgcag gagcttcttg gcggcgagac
     1141 gaggatcgaa ggcgctatcg ggcttcattt ttgcgctcgc acgctagtga tcgggctccg
     1201 ccaaaatttt acgtgcttgg ggttgaaatc gctaccgaat cacatagttg ttgcaaagag
     1261 gccacatttc agacccggtt tatagggttc aaaatgcgcg ggacgtgacg gaagaggggc
     1321 tcatgccgac aatcgctctc gtcgacgacg accgcaatat tctgacttcc gtgtcgatgg
     1381 cgctcgaagc cgagggctat cgcatcatga catataccga cggcgcctcg gcgctggacg
     1441 gtttcaagac gtcgccgccg gatcttgcga ttctggatat caagatgccg cgcatggacg
     1501 gcatggagac gttgagacgt ctgcgacaga aaaccgacgt tcccgtcatc ttcctcacgt
     1561 ccaaggacga ggagatcgac gagttattcg gcctcaagat gggcgccgac gatttcatcc
     1621 gtaaaccgtt ctcgcagcgg ctacttgtcg agcgcgtgaa ggctgtgctt cgccggtcga
     1681 gtccgaaaga cggcactcct ccgaaggagg tcgattcggc aaaggtcctg gagcgcggcc
     1741 agctgcgcat ggaccccgag cgacatacct gcacgtggaa gggcgagccc gtcactctca
     1801 cggtcaccga atttctcatc ctgcaggcgc tcgcgactcg tcctggcgtg gtcaaaagcc
     1861 gcaacgcgct gatggacgca gcgtatgatg accaggttta tgtcgacgac cgcacgatcg
     1921 acagccacat caagcggctg cgcaagaaat tcaaggtcgt tgacgacgat ttcgagatga
     1981 ttgagacgct ttacggcgtc ggttatcgtt ttaaagaatg acatattg
//
LOCUS       DATDHO010000325         3986 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_213389, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000325 DATDHO010000000
VERSION     DATDHO010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3986)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3986)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3986
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_213389"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..699)
                     /locus_tag="VIY07_06205"
     CDS             complement(<1..699)
                     /locus_tag="VIY07_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEY6381382.1"
                     /translation="MNDHSLPSTADERYGALALIRRLLTEQGFAHWRRYAGAFALMAV
                     AAGCTAASAWVIGDVINEAYINRNVSGIVTLGIITVALFATKGLATYGHSVMLSRIGN
                     RIVADNQRAVFSKLLNEGLGFFSDRHSTEFIARLSTGAAAATQVINLLITSVGRDLLS
                     LIGLLFVMVVQEPLMSFFSFVVVPPAFFVLRKLIRRIYSIARTQFHGGTRIIETLQET
                     LQGVRIVKAFTLEDI"
     gene            complement(814..1815)
                     /gene="galE"
                     /locus_tag="VIY07_06210"
     CDS             complement(814..1815)
                     /gene="galE"
                     /locus_tag="VIY07_06210"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEY6381383.1"
                     /translation="MTVLVTGGAGYIGSHMVHQLADAGEPVVVLDNLSTGFRFLIPAS
                     VPFIAGTTGDRALVNDIIGHYGVTAIVHFAASIVVPESVSDPLAYYANNTMNTCALLD
                     AAIKAGVRHFIFSSTAAVYGATEAGPISENAPTAPVSPYGTSKLMTEIMLHDAARAHG
                     LRFVTLRYFNVAGADPKMRAGQATLTATHLIKVACETAIGKRPKLEIFGTDYPTPDGT
                     CIRDYIHVSDLVDAHSSALAYLRSGGASATLNCGYGRGSSVLEVIDAVRRASGRDFPV
                     EVSRRRPGDPPALVANVERIHATLPWRPRFQNLDTIVAHALAWEKQLASRRKDAVSS"
     gene            1943..2893
                     /gene="waaC"
                     /locus_tag="VIY07_06215"
     CDS             1943..2893
                     /gene="waaC"
                     /locus_tag="VIY07_06215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEY6381384.1"
                     /translation="MTNILFIKTSSLGDVIHHMPALTDARSARADATFSWLVEEQFAP
                     LVRLHPAVTEVIPVAWRRWRKSVLTPATMAEMGKSFRTVRACQYSDIVDTQGLLRSGL
                     LSRMARGRRHGYDASSIREPLASLFYDARHRVDRRLHAVERNRILSGLALGYVPQGAP
                     DFGLDRTSFGGGASRYAVFLHATARAEKEWPEAQWIALGRALGQDHKLEIILPWGSEI
                     ERRRSENIAREVPEARVPERAPLDEVAKMIGGARFVVGVDTGLLHLAAALAVPLVAIF
                     AGSKPDLTGPVGSGPRSILGNRGMPPTVDEVLGAVSTMTR"
     gene            complement(2902..3906)
                     /locus_tag="VIY07_06220"
     CDS             complement(2902..3906)
                     /locus_tag="VIY07_06220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEY6381385.1"
                     /translation="MARPKPVDMTADRTQATIASALRTLEAEGSGVDALAAALRDGLG
                     TSFAAAIDMIRAAEGRVIVTGMGKSGHVARKIASTFASTGTPAFFVHPGEASHGDLGM
                     IGNHDVILALSWSGETAELKNIADYSRRHNIKLIAMTAIPDSALAKVADVVLALPQAR
                     EACPHNLAPTTSSLMQLALGDALAIALLESHGFTAVDFGLLHPGGKLGTLLKTVGDIM
                     HTGAAMPLSPLGARMSEAILEMTAKGFGCVGITDPGGLLVGIITDGDLRRHMHNKLLD
                     ASVDEVMTRGPKTVRRDQLLSETLDMLNTMKVTALFAIEGGKPVGIIHVHDLLRAGTA
                     "
BASE COUNT          768 a         1176 c         1267 g          775 t
ORIGIN      
        1 gatgtcttca agtgtgaatg ctttcacgat gcggacaccc tgcaacgttt cctgcaacgt
       61 ctcgatgatg cgggttccgc catggaattg cgtccgcgcg atagaataaa tgcgccggat
      121 gagcttgcgc agaacgaaga aagccggcgg aacgaccacg aagctgaaga acgacatcag
      181 cggctcctgc accaccatga caaagagcag gccgatcagt gacagcaggt ctcgtcccac
      241 cgaggtaatc agcagattga tgacctgtgt cgccgccgcc gcgccagtcg acagccgcgc
      301 gatgaactcc gtcgagtgcc gatcggagaa aaagccaagg ccctcattca gcagcttgga
      361 aaagactgcg cgctgattgt cggcaacaat acggttgccg atgcgcgaca gcatgacgct
      421 gtggccgtaa gttgcgagtc ctttggtcgc gaacaacgcg accgtgatga tgccaagggt
      481 gacgattccg ctcacgttgc gattgatgta ggcctcgttg atgacgtcgc cgatgaccca
      541 ggcactggcg gccgtgcaac ccgcggccac tgccataagc gcgaaggcgc ccgcgtatcg
      601 ccgccagtgc gcgaacccct gttcggtgag caagcgccgg atcagggcga gggcgccgta
      661 acgctcgtcg gctgtcgatg gcaagctgtg atcgttcatc cgccctcagt gagctgcgaa
      721 tagggcccgt cggggcagga gcgggcattc cttgcctgcg gccaagggat ttttcaagct
      781 aaaacggcct ttggctgccg aaagcctgca aatttatgaa gaaacggcgt ctttgcggcg
      841 gcttgccagc tgcttttccc atgcaagcgc gtgcgcgacg atcgtatcga gattctggaa
      901 tcgcgggcgc caaggcagcg ttgcgtggat gcgctcgaca tttgcgacaa gcgccggggg
      961 atcgcctgga cgacggcgcg aaacctcaac ggggaaatcg cgtccgcttg cgcgccggac
     1021 agcgtcgatg acctcgagga ctgaagagcc gcgaccatag ccgcagttta gcgttgcgct
     1081 ggccccgccg cttcgcaaat aggcaagcgc tgaagaatgc gcatcaacca gatcgctcac
     1141 gtgaatgtag tcccggatgc aggtgccatc cggcgtggga tagtccgttc cgaatatttc
     1201 caattttgga cgcttgccga tcgccgtttc gcaggcgacc ttgatgagat gcgttgcggt
     1261 caacgtcgcc tgtccggcgc gcatttttgg atcggcgcct gcgacgttga agtagcgcaa
     1321 ggttacgaaa cgcaggccgt gagccctggc ggcgtcgtgc agcatgattt ccgtcatcag
     1381 cttcgacgtg ccgtaagggg agaccggtgc tgtcggtgcg ttctcactga tcgggccagc
     1441 ctccgtcgcg ccgtagactg cggccgtcga agaaaaaatg aagtgccgaa cgccggcctt
     1501 gatcgcggca tcaagcagcg cgcacgtgtt catggtgttg ttggcgtaat acgccagcgg
     1561 gtcggaaacg gattccggca cgacgatcga ggcggcaaaa tggacaatgg cggtcacgcc
     1621 gtaatgcccg atgatgtcat tcaccagggc ccggtcgcct gtggtgccgg cgataaaggg
     1681 tacggaggcc ggaattagaa agcggaatcc tgtcgacaaa ttatcgagca cgactaccgg
     1741 ctcgcccgca tcggcgagtt ggtgcaccat atggctgccg atatagccgg cgcccccggt
     1801 gaccaaaacc gtcatttcaa cagatccttt gagttcgagc gaacgtgtcc cacgcccatg
     1861 atatccgcgt tttcatcccg tgatgatggc atggttatag cggccattcc taaggccggg
     1921 tatatgcatg cccagacgcg caatgaccaa cattcttttc atcaagactt cctcgcttgg
     1981 cgacgtgatc catcacatgc cggcattgac cgatgcgcga tcggcgcggg cagacgcgac
     2041 gttcagctgg ctggtcgaag aacagtttgc gccactggtg cgactccatc cagccgtgac
     2101 cgaagtcatc ccggtagcat ggcgacgctg gcgaaagtcg gttttgacgc cggccaccat
     2161 ggcagagatg ggcaagagtt tccgcactgt ccgggcctgc cagtacagcg acattgtcga
     2221 tacccagggg cttttgcgta gcggtctgct ctcgcggatg gcgcgcggac gccggcacgg
     2281 gtacgacgct tcgagcatcc gagaacctct ggcgtcgctt ttttatgatg cgcgccatcg
     2341 tgtcgaccgt cgtctacatg cggtggagcg caacaggatc ctgagcgggc tggcattggg
     2401 ttatgttccg cagggagctc ccgacttcgg ccttgatcgc acgagctttg gaggcggcgc
     2461 gtcgcgctat gccgtctttt tgcacgcgac tgcgcgtgcc gaaaaggagt ggcccgaggc
     2521 gcagtggatc gcgctggggc gggcactcgg tcaggatcat aaactcgaga ttattctgcc
     2581 ctggggcagc gagatcgagc gcaggcgcag cgagaacatt gcgcgcgagg tgccagaggc
     2641 gcgcgtgccg gagcgagcgc ccctcgacga ggtcgcgaag atgataggcg gcgcgcggtt
     2701 cgttgtcggc gtggacaccg ggcttctgca ccttgctgcc gcgcttgctg tcccgctggt
     2761 cgcgatcttt gccggcagca agcctgacct gaccgggccg gtcggcagcg gcccacgctc
     2821 gatcctgggc aacaggggaa tgccgccgac cgtcgatgag gttctcggcg ctgtctcaac
     2881 aatgacccga tagatttttg tttacgccgt gccggcccgc agcagatcgt ggacgtgaat
     2941 gatgccgacc ggtttgccgc cctcgatggc aaacagcgcg gtgactttca tcgtgttgag
     3001 catatcgagg gtctcgctga gcagttgatc gcggcgcact gtctttggtc cacgcgtcat
     3061 gacctcgtcg acgctggcgt cgagcaactt gttgtgcatg tgtcgacgca ggtcgccgtc
     3121 ggtaatgatt cccacgagca atccgcccgg atcggtgatg ccaacacagc cgaagccctt
     3181 cgctgtcatt tccaggatcg cctccgacat ccgcgcgccg agcggcgaca gcggcattgc
     3241 cgcgcccgta tgcatgatgt cgccgaccgt tttcagaagg gtgcccagct tgccgcccgg
     3301 atgcagcaga ccgaaatcga cagccgtaaa accatggctt tccaggagcg cgatggccaa
     3361 ggcatcgccg agggcaagct gcatcagaga ggaggttgtc ggcgcaagat tgtgcgggca
     3421 tgcctcgcgc gcctgtggca gggcgagcac gacgtccgca acctttgcca aagcgctgtc
     3481 cgggatcgcc gtcatcgcga tcaacttgat gttatggcgg cgggaataat cggcgatgtt
     3541 tttcaactcg gccgtttcgc cagaccacga aagcgccagg atgacgtcgt ggttgccgat
     3601 catcccaagg tcgccgtggc tcgcctcgcc gggatgcacg aaaaacgccg gagtgccggt
     3661 ggaggcgaaa gtggacgcga tcttgcgtgc aacatgaccg gacttcccca tgccggtcac
     3721 gatcacccgg ccttccgcgg cgcggatcat atcgatggca gcggcaaatg aagtgccgag
     3781 gccatcgcgc aatgccgcgg ctagcgcgtc gacgccgctg ccctcggctt caagggtgcg
     3841 gagcgccgac gcaatcgtcg cctgcgttcg atcggcggtc atatcgacgg gtttcggtct
     3901 ggccatgctg cttgatatca cgaaaagaac ttcacgtctt gcttcgctta ctcgttaacg
     3961 gtcgtgccgg ctagcattga tttttg
//
LOCUS       DATDHO010000326         4120 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_62706, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000326 DATDHO010000000
VERSION     DATDHO010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4120
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_62706"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            253..606
                     /locus_tag="VIY07_06225"
     CDS             253..606
                     /locus_tag="VIY07_06225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381386.1"
                     /translation="MSEQIVRRTERIVDAQSAMPWLVAVGVYALLTAVGPKLLSDPDT
                     YSHIALGRWILEHGTVPAIDPFSATLRGTHWVAFEWLSQVVFAIAHAAAGWTGVVAVT
                     AVAMATALGLLSRFL"
     gene            628..1695
                     /locus_tag="VIY07_06230"
     CDS             628..1695
                     /locus_tag="VIY07_06230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381387.1"
                     /translation="MLVAVLCVILLTAPHILARPHILALPVTVAWIALLIRAVDTRSS
                     PPWLLLPLMPLWANLHGSFTFGLAMIAPIACDALWRAPQSERLGVARQWSFFAVLAFG
                     AACLNPYGPEIILVTFRTVALGAALTTITEWRPQDFTHLGAFELIMLGAFGFALYRGV
                     TLPWLRIVMLLGVLHLSLSQVRHADLLGLLAPIFLARPLAEQFKEIAADQAGSGMRRP
                     AWVAAAALVVLTGITGFASMRSVTPADRITPARAISAVDIVQAGPILNDYDFGGYLDF
                     VGIPPFIDGRSELYGQAYILRHDRALSLQNLPDFLRLLDDYSIRATLLAPSTPAVALL
                     DRLPDWRRAYADDIAVVHMRR"
     gene            1815..2069
                     /locus_tag="VIY07_06235"
     CDS             1815..2069
                     /locus_tag="VIY07_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002964913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEY6381388.1"
                     /translation="MSLQALIILIIVGAIAGWLAGVIVKGVGFGLIGNIIVGIVGAFI
                     GTWVLGALGVMIGGGVIASIINATIGAVILLLIISLVKRA"
     gene            2186..>4120
                     /locus_tag="VIY07_06240"
     CDS             2186..>4120
                     /locus_tag="VIY07_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein meaA"
                     /protein_id="HEY6381389.1"
                     /translation="MRDKTQRDKPWIFRTYAGHSTAADSNALYRKNLAKGQTGLSVAF
                     DLPTQTGYDSDHVLAKGEVGKVGVPICHLGDMRALFDGIPLDSMNTSMTINATAAWLM
                     ALYIAVADEQDAPRAALQGTIQNDIIKEYLSRGTYVFPPAPSMRLIKDVILFTTKEIP
                     KWNPINVCSYHLQEAGATPVQELAFALATAIAVLDTVKASGEVSSDKFGDVVGRISFF
                     VNAGLRFITELCKMRAFTELWNEITRERYGITDPKQRLFRYGVQVNSLGLTEPQPENN
                     VARILIEMLAVTLSRNARARAVQLPAWNEALGLPRPWDQQWSLRMQQILAYETDLLEY
                     GDIFDGSDEIAQKVEDLKQQAREELRRIEEMGGAVAAVDMGYMKQQLVESNTARLEAI
                     ERGEQTVVGVNKYLESEPSPLAGAADAILTVSENAERGQIERLKAWRGSRDNAAVAEA
                     LKDLKRAATSGGNIMPASIVCAKAGVTTGEWGWTLREAFGEYRAPTGVGRAMRNDVAG
                     LDDIRADVDRVSRKLGRRLTFLVGKPGLDGHSNGAEQIAVRARDAGMQVVYEGIRLTP
                     EEIVEAARKEKAHVVGLSVLSGSHLPLVEDVVDRMKRAGLDVPVVVGGIIPPEDAAEL
                     EKAGVAAVYTPKDFELNRIMS"
BASE COUNT          779 a         1222 c         1270 g          849 t
ORIGIN      
        1 ccaatcccgt aaaaatcctt gagaggggca acatctctcg gcttagcgac agccggcatc
       61 gtcattctcc ctgcctgata acactctgac ctaaattatg ttgcatcgca atatttggtt
      121 gatatcggcg tggaaatcgt cagcacgcca gcgggttatg ggcgcccgac gtccctgcac
      181 cacaagcgag acccttaagg gatttgcaat gcgagccgcc tagcgtggac atgcaactca
      241 tctgggcgcg gcatgtctga acagatcgtt cgccggacgg aacggattgt ggacgcacag
      301 tccgccatgc cgtggcttgt ggccgtcggc gtgtacgccc tgctgacggc tgttgggccc
      361 aaactgctgt ccgatcccga cacttattcg cacatcgcgc tcgggcgctg gatcctcgaa
      421 cacggcacag tccctgcaat cgatccattt tcagccacgt tgcgcggaac ccattgggtt
      481 gcattcgagt ggctctcaca ggtcgtgttt gcaatagctc atgcggccgc aggttggacc
      541 ggcgtcgtcg cagtgacagc agtcgcgatg gcgacggcat tgggtctgtt aagtcgattt
      601 ctgtagcgcg agtggcagcc aaccgccgtg ctggtcgcgg tactatgtgt gatcttgctc
      661 accgcgccgc acatcctggc gcgacctcac attcttgcgc ttccggtgac ggttgcgtgg
      721 atcgccctgt tgatccgcgc cgtcgacacg cgcagttcgc ccccgtggct tctgcttccg
      781 ctgatgccac tgtgggccaa cctgcacggc agttttacgt ttggtctcgc aatgatcgcg
      841 cccatcgcct gcgatgcgct gtggcgcgcg ccgcaatcag agcgacttgg cgtagcccga
      901 cagtggtcct ttttcgctgt gctcgctttc ggcgctgcct gtctcaatcc atacggtcca
      961 gaaattatcc tggtgacatt ccgcactgtg gcgctggggg cagcgttgac cacaattact
     1021 gagtggcgtc cgcaggattt cacccatctt ggagcgttcg agctgataat gctcggcgcc
     1081 ttcggcttcg cgctttaccg aggcgtgacg ctgccctggt tgcgaatcgt gatgttgctc
     1141 ggcgtgttgc atctgagcct gtcgcaagtg cgtcacgccg atcttcttgg attgctggcg
     1201 ccgatctttc tcgcccggcc cctcgctgaa caattcaagg aaattgccgc ggatcaagcc
     1261 ggctcgggca tgcgcaggcc ggcatgggtg gcggccgcgg ccctggttgt cctgacgggg
     1321 atcaccggct ttgcatcgat gcgaagcgtc acgcctgcag atagaattac gccagcacgt
     1381 gcaatcagtg cagtcgacat cgttcaggca ggtccaattc tcaatgacta cgattttggc
     1441 ggctatctgg attttgtggg aattccgcca ttcatcgatg gccgctccga gctttacggt
     1501 caggcttaca tccttcgcca tgaccgggca ttgagcctgc aaaatctgcc ggatttcctg
     1561 cggctgctcg atgactacag catacgtgca actttgctcg cgccttccac gccggccgtc
     1621 gctttgctcg accggctgcc agattggagg cgcgcctacg ccgacgatat cgccgtcgtc
     1681 catatgcgac gctgaacatt tccacagacc accggccgca cttgcgagcc gtcgacggga
     1741 cgccggcttt ggtattcaat cggacgtcag cggccgcctt cgagaggcac gccgttattc
     1801 gggggaagaa agccatgtca ttgcaagcat tgatcatcct catcatcgtc ggtgcgatcg
     1861 ccggctggct cgcgggtgtc atcgtcaaag gcgttggttt tgggctgatt ggtaacatca
     1921 ttgttggaat cgtgggcgcg ttcatcggca cctgggtgct cggggcgctg ggcgtcatga
     1981 tcgggggcgg agtaatcgct tccatcatca acgccacgat cggagccgtc attctgctat
     2041 tgatcatcag cttggtgaaa cgggcgtaga tccgctccat cgggagcctg gaagccgtat
     2101 agccggcagg gacgctggtc ccgccggagg tggtgatgtt gcgttgcaac aagcagtgag
     2161 ccaaaatgtc gccgtcaggc gatcgatgcg agacaaaacc caacgcgata agccgtggat
     2221 tttccgcacc tatgccggcc actcgacggc cgcggattcc aatgcgcttt accgcaagaa
     2281 cctggccaag ggccaaaccg gtctttcggt tgctttcgat ctgccaacgc agaccggcta
     2341 cgactccgat cacgtcctgg ccaaaggaga agtcggcaag gtcggggtgc cgatctgcca
     2401 cctcggcgac atgcgagcgc tgttcgacgg cattccgtta gacagcatga atacctcgat
     2461 gaccatcaac gccaccgcgg cgtggctgat ggcgctttac atcgctgttg ccgacgaaca
     2521 ggacgcgccg cgcgccgcgc tgcaaggcac gatccagaac gacatcatca aggaatatct
     2581 ttcgcgcggc acctacgtct ttccgccggc gccctcgatg cggctgatca aggacgtaat
     2641 cctgtttacg accaaagaga ttccgaaatg gaatccgatc aatgtctgct cctaccatct
     2701 gcaagaggca ggagcgacgc cggtgcagga gctcgctttc gcgcttgcaa ccgcgattgc
     2761 ggtactcgat accgtcaagg cctccggcga ggtctcttcg gataaattcg gcgacgtggt
     2821 cggccggatt tcattcttcg tgaatgcggg cctgcgattc atcaccgaat tgtgcaagat
     2881 gcgcgcattc accgagctat ggaacgagat aacgcgcgaa cggtacggca tcaccgatcc
     2941 caagcagcgc ctgttccgct acggcgtaca ggtcaattcg ttggggctga ccgagccgca
     3001 gcctgaaaat aacgttgcgc gcattctcat cgagatgctt gccgtcacct tgtcgagaaa
     3061 tgcgcgcgcg cgggccgtgc agctgccggc gtggaatgag gcgctgggat tgccgcggcc
     3121 atgggaccag cagtggtcgt tgcgcatgca gcagatcctc gcttacgaga ccgacctgct
     3181 cgagtatggc gacattttcg acggctccga cgaaattgcg caaaaggtag aagacttgaa
     3241 gcagcaggcg cgggaagagc tcaggcgcat cgaagagatg ggcggtgcgg ttgcggcagt
     3301 cgatatgggt tacatgaagc agcaactggt tgaatcgaat accgcgcgcc tggaagcgat
     3361 cgagcgcggc gagcagaccg tggttggggt gaacaagtat ctcgaaagcg agccctcgcc
     3421 gctggcgggc gccgccgacg ccatcctgac cgtgtcggag aatgccgaac gcggacaaat
     3481 cgagcgtctc aaggcatggc gtggatcgcg ggacaatgca gccgttgctg aagcactgaa
     3541 agatttgaag cgcgcggcga ccagcggcgg caacatcatg ccggcctcaa ttgtttgtgc
     3601 caaagcaggt gtcacgaccg gtgagtgggg ttggacgctg cgcgaggcct tcggcgaata
     3661 ccgcgcaccg accggggttg gccgcgccat gcgcaacgac gtggccggcc tcgatgacat
     3721 tcgcgccgac gtcgaccgcg tctcgcggaa gttgggccgg aggctcacgt tcctcgtcgg
     3781 caaaccgggg ctcgatggcc attccaacgg cgccgagcag atcgccgtgc gcgcacgcga
     3841 tgccggcatg caggtcgtct acgagggcat ccggctcacc ccggaggaaa tcgtcgaggc
     3901 ggcgcgcaag gagaaagcgc atgtggtggg cctgtccgta ctgtcaggca gtcatcttcc
     3961 gctggtcgaa gacgtcgtcg accgcatgaa acgggccgga cttgacgtac ctgtggtggt
     4021 cggcgggatc attccgcccg aagacgcggc ggaactggaa aaggccggcg tcgctgcggt
     4081 ttacaccccg aaggattttg agttgaaccg catcatgtcc
//
LOCUS       DATDHO010000327        11425 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_411861, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000327 DATDHO010000000
VERSION     DATDHO010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 11425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11425
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411861"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(23..1210)
                     /gene="alr"
                     /locus_tag="VIY07_06245"
     CDS             complement(23..1210)
                     /gene="alr"
                     /locus_tag="VIY07_06245"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009800112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEY6381390.1"
                     /translation="MAKAETALHADLPVETASQGRRTESSRFDSPAGGILTIDLGAMV
                     SNWQDLARRSMPSECAAVIKADGYGCGIDPVARALAAAGCRTFFVADLAEARHVRAVA
                     SEPVIYVLNGLLPGSVDAFAAVRARPVIGSLVELAEWDAFCAANGWRGGAALHVDTGM
                     NRLGVSAEEAVALAPRIRAANHGINLLMSHLVSAEQPDHPLNERQMNLFREVRFLYRG
                     IPSSLANSSGIFLGSAAHCDMVRPGAALFGINPTPGHRNPMRPVVELQARVLQVRTVP
                     KGETVGYNATWTAKHLTRVAIVAVGYADGYPRAASATDAAPGASAIVSGTRCPLAGRV
                     SMDLLAIDITALPDHSVRRGDLVTLIGGDMGVDALAAAAGTIGYEILTSLGSRYRRAY
                     REG"
     gene            complement(1256..2755)
                     /locus_tag="VIY07_06250"
     CDS             complement(1256..2755)
                     /locus_tag="VIY07_06250"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEY6381391.1"
                     /translation="MALADSTARKQVEEPAPLYRSAPHNIEAEQALLGAILVNNEAFY
                     RVSDFLEPAHFFEPIHQKVYQLSRDLIRAGKLATPVTLKTFLDGNIDISGLTVSQYLA
                     RLAAEATTIINAEDYGHTVYDLSIRRALIQVGEDMVNVAYDAPVDFSPRAQIEDAERR
                     LYELAETGRYDGGFQRFAQALTTAIDMAAHAFQRDGKLSGTATGLDDLDRMMGGLQQS
                     DLVILAGRPGMGKTALATNIGYNVAKAWRGEIKPDGHTNTVNGGIVGFFSLEMSAEQL
                     ATRIIAEQTGIPSNQIRRGGISESDFEKIKDYSIELQNIPLYVDETGGLSVAQLAARA
                     RRLKRQRGLDLVIIDYLQLLQGSTRRSAENRVQEITEITTKLKALAKELNVPILALSQ
                     LSRQVESRDDKRPQLSDLRESGSIEQDADVVLFVYREEYYHQMRKPLESNREKFAEWL
                     AEADKVHGKAEVIIGKQRHGPTGTVELQFDAAVTRFSSLAREARLPERM"
     gene            complement(2915..4165)
                     /locus_tag="VIY07_06255"
     CDS             complement(2915..4165)
                     /locus_tag="VIY07_06255"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEY6381392.1"
                     /translation="MDRLLQTLLGEFIRRGTFKLTTSRGTTLTFGDGTGAPVAVRLTT
                     RAAELGILFDPELKFGEVYMDGTLVIEQGTIADVLAVLLGQENEVPNWGRAQWLLRYV
                     GRRLAQFNPRRRARRNVAHHYDLDSRLYALFLDADRQYSCAYFETPDMSLDDAQLAKK
                     RHLAAKLRLEPDQRVLDIGSGWGGLGLYLAEVGGANVTGITLSQEQHAIANERAAEKR
                     LSNRARFLLRDYRDVRDEFDRIVSVGMFEHVGVGHYDAFFSKCAELLNDNGVMVLHSI
                     GRSEGPNVTNPWIAKYIFPGGYIPALSEVVPAIERAGLLVTDIEILRMHYAETLKAWR
                     ERFLAHRENVERIYEPNFVRMWEFYLAASEMSFREQNMMVMQIQLAKRQGVVPITRDY
                     ISREERRLAAAEGKRKPPLRLAGE"
     gene            complement(4925..5599)
                     /gene="rplI"
                     /locus_tag="VIY07_06260"
     CDS             complement(4925..5599)
                     /gene="rplI"
                     /locus_tag="VIY07_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEY6381393.1"
                     /translation="MEVILLERIGKLGQMGDVVRVKDGFARNFLLPRGKALRATVDNK
                     KRFEEMKAELQVRNLEMKGEAGKLAGKLDGKSFVVLRQASEAGQLFGSVSARDIAVLL
                     KDDGAEIARSLIALNAPIKTIGQYKVPLALHPEVEVAITITVARSADEAQRIARGEDV
                     TVRRTDAEEAAAVAAAAAEAMFEPEAASARRDREDTGATPAAGAEAAETPAKPAKAKK
                     KKSEEA"
     gene            complement(5645..6631)
                     /locus_tag="VIY07_06265"
     CDS             complement(5645..6631)
                     /locus_tag="VIY07_06265"
                     /inference="COORDINATES: protein motif:HMM:NF021506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2232 domain-containing protein"
                     /protein_id="HEY6381394.1"
                     /translation="MMHLAVIGIGAGAAAALLFASVTSGTLLSIPLFYLAPLPIMIAG
                     LGWSHWAALTAALAGSVALGIFFGVVFLFAFMVGAGIPGWWLGYLAMLARPAAPAADA
                     PEHQTAVEWYPPGRLVLWAAILGAMVVLVAIPNFGTDAESFRTGLRSALSMILRTQVG
                     SPGNESVDVPGAGKADRLIDFLVTAIPVAAAVLATITNLLNLWLAARIVKFSGRLSRP
                     WPELSAMTFPPAIIAALALAIALSFVDGLLGIVAGVFSASLLLAYGVLGFAVLHAITA
                     GMNMRGLVLALAYAAVIVLGWPLLALCLLGLFDSVVDLRGQVARKRGPPALS"
     gene            complement(6725..6973)
                     /gene="rpsR"
                     /locus_tag="VIY07_06270"
     CDS             complement(6725..6973)
                     /gene="rpsR"
                     /locus_tag="VIY07_06270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007561044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEY6381395.1"
                     /translation="MAFAPQGGARRPFFRRRKTCPFSGANAPKIDYKDVKLLQRYVSE
                     RGKIVPSRITAVSAKKQRELAQAIKRARFLGLLPYVIQ"
     gene            complement(6977..7378)
                     /gene="rpsF"
                     /locus_tag="VIY07_06275"
     CDS             complement(6977..7378)
                     /gene="rpsF"
                     /locus_tag="VIY07_06275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEY6381396.1"
                     /translation="MPLYEHVYLARQDLSAQQVEDLTTQLSGVIGQMGGKVTKNEYWG
                     LKSLTYRIRKNRKAHMTLINVDAPAAALNEIERQERLNEDVLRYLTIRVEAHEEGPSA
                     MVRKSDRDRDERGRGERRRGDEIEDVGVSEE"
     gene            complement(7638..7865)
                     /locus_tag="VIY07_06280"
     CDS             complement(7638..7865)
                     /locus_tag="VIY07_06280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381397.1"
                     /translation="MYDPVTEDELVRARIDPVFRRQFLAQNLNRLLEALKRLRLAQQN
                     GDTARQIREGADLAVKLADRLQSDEGGTHAV"
     gene            8010..8957
                     /gene="fabD"
                     /locus_tag="VIY07_06285"
     CDS             8010..8957
                     /gene="fabD"
                     /locus_tag="VIY07_06285"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEY6381398.1"
                     /translation="MSVAFVFPGQGSQFVGMGKSLAANFTAAQDVFDEVDTALDGKLS
                     TVIFEGPTDTLMLTENAQPALMAVSLAAFRVLEQEAGFRLKSDAQFVAGHSLGEYSAL
                     AAAGAFTIAEAARLLRTRGQAMQKAVPVGEGAMAALIGLEFDAASAVASQAAQGEVCQ
                     AANDNGGGQVVVSGSKRAVERAVEIAKTRGAKRAMLLPVSAPFHCALMQPAADVMAEA
                     LANVSIKAPSVPIVANVLASPVQDPAQIVRALVAQVTGTVRWRESIAYMAGAGVTSFY
                     EVGAGKVLSGLIKRIADGATTGAIGSAEDVASFKAGRTP"
     gene            8957..9694
                     /gene="fabG"
                     /locus_tag="VIY07_06290"
     CDS             8957..9694
                     /gene="fabG"
                     /locus_tag="VIY07_06290"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEY6381399.1"
                     /translation="MFDLTGKTALVTGASGSIGGAIARALHAQGAIVAVSGTRQDALD
                     SIAAALRDRVHVLPCDLADKDAVEALVPSAEEKMEKLDILVANAGVNRDNLFVQLRDE
                     DWDKVIAVNLTATFRLTRAAVSRMMRRRWGRVIAISSVVGFTGNPGQGNYTASKAGMV
                     GMIKSVAAEYAKRNITANCIAPGLIASAMTDKLNDKQREAIFARIPAAKLGTPDDVAA
                     ATVFLASNEAGYVNGQTIHVNGGMAMI"
     gene            9977..10216
                     /locus_tag="VIY07_06295"
     CDS             9977..10216
                     /locus_tag="VIY07_06295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEY6381400.1"
                     /translation="MSDIGERVKKIVVEHLGVEPDKVTDQASFIDDLGADSLDTVELV
                     MAFEEEFGCEIPDDAAETILTVGDAVKFLEKNAKS"
     gene            10309..>11425
                     /gene="fabF"
                     /locus_tag="VIY07_06300"
     CDS             10309..>11425
                     /gene="fabF"
                     /locus_tag="VIY07_06300"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEY6381401.1"
                     /translation="MRRVVVTGLGMLTPLGCGVEPTWTRLLNGESGAKKIDHFDVSDI
                     ACKIACVIPRGDGSNATYNPDQWMEPKEQRKVDEFIVFAMCAARQALDDAGWHPESYE
                     DQTGTGVLIGSGIGGIEGIAETAIALHEKGPRRVSPFFIPGRIINLASGFVSIAFGLK
                     GPNHAVVTACSTGAHAIGDAARLVALGDAEVMVAGGAESPVNRISLAGFSALRALSTN
                     FNDDPTRASRPYDKDRDGFVMGEGAGIVVLESLEHAKARGAKIYAELIGYGLSGDAYH
                     ITAPSPDGDGALRCMSAAIRRAGISTGDIDYINAHGTSTLLGDEIELGAVQKLVGNAA
                     GRMSMSSTKSCIGHLLGAAGAVEAIFSVLAIRDQVAPP"
BASE COUNT         2293 a         3410 c         3502 g         2220 t
ORIGIN      
        1 gatcaggaca ttaaagaggc cctcaaccct cccgataggc gcgccggtat cgcgagccca
       61 ggctggtcag tatctcgtat ccgatcgtgc ctgcggccgc tgccagggcg tccacgccca
      121 tgtccccgcc gatcagagtg acaaggtctc cgcgcctgac agaatggtcg ggcagggccg
      181 ttatgtcgat cgcgagaagg tccatagaga cgcgtccggc caagggacag cgtgtgcctg
      241 aaacaatggc gcttgcgcct ggggctgcat cggtggcact ggccgcgcgc ggatagccat
      301 cggcatagcc gaccgcaact atcgcaacgc gcgtgagatg cttggctgtc caggttgcgt
      361 tgtaaccgac cgtttcgcct ttcggcacgg tgcgcacctg caggacgcgt gcctggagtt
      421 caacgaccgg gcgcattgga ttgcgatggc cgggcgtcgg attgatccca aatagcgccg
      481 caccgggacg caccatgtcg caatgggcag cactgccgag gaagataccg gacgaattgg
      541 cgagcgaact tgggatgcca cggtaaagaa accggacctc acggaataaa ttcatctgac
      601 gttcgttgag cgggtggtcg ggttgctcgg cggagacgag atggctcatc agcaggttga
      661 tgccgtggtt tgccgcacgg atgcgtggcg ccagtgctac ggcctcctca gcggagacgc
      721 ccagccggtt cattccggta tcgacatgga gcgcggcgcc accacgccat ccgttggccg
      781 cgcaaaatgc atcccattcc gcgagttcga ccaggctgcc gatcaccggc cgagcacgaa
      841 ccgcggcaaa cgcgtccacg cttccgggca aaagtccgtt gagcacgtag atgacaggtt
      901 ctgacgcaac ggcgcgcacg tgccgggcct cggcgagatc ggcaacaaag aacgtcctgc
      961 atccagcggc ggcaagcgcg cgggcaactg gatcgatgcc acagccgtag ccgtccgcct
     1021 tgatgacagc cgcgcattcc gacggcatcg accggcgggc caggtcctgc caattggata
     1081 ccatggcccc cagatcgatc gtcagtatcc cgccagccgg tgaatcgaac cgcgacgatt
     1141 cggtccggcg gccttgggag gctgtctcca ccggcaagtc ggcgtgtagg gctgtttcgg
     1201 ccttggccat ggtgttcggt ttagctgccc gtggcactcc agtccatgtg gcgtcttaca
     1261 tccgttcggg caaacgagct tcgcgggcaa gcgatgagaa gcgggtcact gcggcatcga
     1321 actgcaattc gaccgtgccg gtcgggccat ggcgttgttt gccaatgata acttcggcct
     1381 tgccgtgcac cttgtccgct tccgccagcc actccgcaaa cttctcgcgg ttcgactcca
     1441 gcggcttgcg catctggtga taatattcct cgcggtagac gaataggacg acgtcggcgt
     1501 cctgctcgat ggaaccggat tctcgcaggt ccgacagctg gggccttttg tcgtcgcggc
     1561 tttccacttg gcgcgaaagc tgcgagagcg ccagaatcgg cacattaagt tcttttgcca
     1621 aggccttgag cttggtggtg atctcggtaa tttcctgtac ccggttttcc gccgagcgcc
     1681 gcgtcgagcc ctgcaggagc tgcaaatagt cgatgatcac caaatccagg ccgcgctggc
     1741 gcttgagccg tcgcgcgcga gccgccagtt gcgcaaccga caggccaccc gtttcgtcga
     1801 cataaagcgg aatgttctgc agttcgatcg agtaatcctt aattttttcg aaatcacttt
     1861 cactgatgcc gccgcgccga atctggtttg acgggatgcc cgtctgctcg gcgatgatac
     1921 gggtggcgag ctgctcggct gacatttcga gcgagaagaa cccgacaatc ccgccattca
     1981 ccgtgttggt atgcccgtct ggcttgatct cgccacgcca ggctttcgca acattgtatc
     2041 cgatattcgt ggcgagcgcg gttttgccca tgccggggcg gccggccaga ataaccaggt
     2101 cggattgctg caggcccccc atcatccggt cgaggtcatc gagcccggtg gcggtaccgg
     2161 aaagcttgcc atcgcgctgg aacgcatgcg cggccatatc gatggctgta gtgagcgcct
     2221 gcgcgaaacg ctggaagccc ccgtcgtacc gaccggtttc cgccagctcg taaagccttc
     2281 gctccgcatc ttcgatttga gcccgcggag aaaaatcgac aggcgcatcg tacgcgacgt
     2341 tgaccatatc ctcgccgacc tggatgagcg cacgacggat cgacaggtcg taaaccgtat
     2401 gcccgtagtc ttcggcgttg atgattgttg tcgcctcggc ggcgagccgc gccagatatt
     2461 gactgacagt gaggccgcta atgtcgatgt taccgtcaag aaacgtcttc agtgtaacag
     2521 gcgtcgccag cttgccggcc cgtatgaggt cacgtgaaag ctgatagacc ttctgatgga
     2581 tcggttcgaa aaagtgcgcc ggttcgagaa aatccgaaac gcgataaaag gcttcgttgt
     2641 tgacgaggat tgcgcctaaa agcgcctgtt ccgcctcgat attatgcgga gccgagcggt
     2701 agagcggagc aggttcttcg acctgcttgc gggctgtcga atcagcgagt gccatggaaa
     2761 ttcggtgctt acccggaaat tgtggcatag cacgcgtttt gtgagggaac cgcactgcgg
     2821 acgaggttgc cccgcaattc acaagccgca cggagcggtg ggtaagtggg ttttcttgac
     2881 cgcggagatc tatgcaagcg ggtttcagac gaagctattc accggcaagg cgaagcggtg
     2941 gcttgcgctt gccttcagcg gcggcgagcc gcctttcctc gcgcgaaata tagtcccgcg
     3001 tgatagggac gacgccctgg cgcttggcaa gctggatctg catcaccatc atgttctgct
     3061 cgcggaagga catttctgaa gccgcgagat agaattccca catacgcacg aaattcggct
     3121 cgtatatccg ttcgacgttc tcgcgatgag ccagaaaccg ctcacgccag gccttcagcg
     3181 tctcggcata gtgcatgcga agaatttcaa tatccgtgac aagcaggcca gcgcgttcga
     3241 tcgccggcac cacctccgac agcgccggaa tatagccacc cgggaaaata tatttcgcaa
     3301 tccatggatt ggtgacgttc ggcccttccg agcggccgat tgaatgcagc accatcacgc
     3361 cgttgtcgtt gagcagctcg gcgcatttgc taaaaaaagc atcgtaatgg ccgacgccga
     3421 cgtgttcgaa catgcccacg gaaacgatgc gatcaaattc atcgcgcaca tcccgataat
     3481 cccgcagcag gaatcgcgcg cgattgctta gtctcttttc ggcggcacgt tcattggcga
     3541 tcgcgtgctg ctcttgcgat agggtgatcc ccgtcacgtt ggcgccgccg acttcggcca
     3601 gataaaggcc caggccgccc caaccggaac caatgtcgag gacacgttgg tctggctcga
     3661 gtcggagctt ggcggcgagg tgacgtttct tggcgagctg tgcgtcgtcg agtgacatgt
     3721 ccggcgtttc gaaatatgcg cagctgtatt gcctgtccgc gtcgagaaag agcgcgtaca
     3781 gacggctgtc caggtcgtaa tggtgcgcga cattgcgtcg cgcgcgccta cgcggattaa
     3841 actgggctaa tcgacgcccg acgtagcgta gaagccattg cgcgcgcccc caattgggca
     3901 cctcgttttc ctggccgagc aggacggcaa gtacgtcggc gattgtgccc tgctcaatga
     3961 ccaacgtgcc atccatatac acttcgccga acttgagctc ggggtcgaac agtatcccga
     4021 gttcagcggc gcgcgtcgtg agacgcactg caaccggcgc gccagtgcca tcgccaaatg
     4081 taagagtcgt cccccgcgag gtggtgagct tgaacgtacc ccgccggatg aattccccga
     4141 gcaaagtctg aagcaaccgg tccatcggcc gcctccatca cccaatccgc gcgcctctac
     4201 cggctctttt cgaaatgaca acgcagcgga tgtacaaacg ttcttaggta tttaatcaaa
     4261 gttaccaagc gccagcaatg ctgcaaaaac gcaatgccac cattcgtctg aacgcagtca
     4321 caatagtaag ataatgcgct agcaaggtat tacatcgtcg agcagatgga cgccaaggga
     4381 gtgtaaaaac ggatgaatct aaaaagacgc gtctgcagga caggtctcgt gagcggcatc
     4441 atagtggcat tcctaggcag cagcgcgggc gcgcaggaaa gcctcgatcg gggcaaaagt
     4501 ccggcccagc tattcgcctc ccactgttcg gcttgtcaca aatcgccccg cgggttggcc
     4561 aaatcgggcg ggctattcgg tctcgatggt ttcctgcgcg agcattatat gacagccgcg
     4621 aaacagccgc tgccatgtcc agttatctga gaggatggga cagcgggcct gctccggcgc
     4681 gcgcatcaaa gcgtgcggcc agaggcgacg acaatgcgaa gctcaatgaa aggaaaaagc
     4741 cggcgtccaa gccaggcgag gcgaggggag ccggggagtc caaggcgtcc gagtccaagc
     4801 ccgctgatat ccttgcgccc gaacctggat cggcggcccg gaagccgagc gcgcccgcgg
     4861 caggcgaggc aaagcccgtc gaaggcacca ggcagcgata aatcgaacca gcgggcgacg
     4921 cggctcaggc ctcttcgctc tttttctttt tggcttttgc aggcttggcg ggggtctcgg
     4981 cggcttccgc cccggccgcc ggcgtcgctc ctgtgtcctc gcgatcgcgc cgcgcacttg
     5041 cggcctcggg ctcaaacatc gcttccgcag cggccgccgc aacagccgca gcttcctcgg
     5101 cgtctgtacg cctcactgtc acgtcctcac cacgcgcaat gcgctgcgct tcgtctgcgc
     5161 tacgcgcgac tgtaatggtg attgccacct cgacttcggg gtgaagtgcc aatggcactt
     5221 tgtattggcc gatcgttttg attggtgcat tgagcgcaat cagcgagcgc gcgatctctg
     5281 ctccgtcatc tttgagcaag acagcaatat cacgcgcgga aacagagcca aacaattggc
     5341 ctgcttcgct cgcctgacgc agcaccacga agctcttgcc gtcgagcttg cccgcaagct
     5401 tgccggcttc gcccttcatt tcgaggttgc gcacctgaag ctcagccttc atctcctcga
     5461 atcgcttctt gttgtcgacc gtcgctcgca aggccttgcc gcgcgggagc aaaaagttgc
     5521 gcgcaaaccc atcctttaca cgcacgacat cgcccatttg tccgagcttt ccgatacgct
     5581 cgagcagaat cacttccatt tttgtttctc cttcttaatc tgaattttcg tcaccgattt
     5641 gatctcacga aagggcggga gggccgcgtt tgcgcgcgac ctgccctcgt aagtcaacaa
     5701 ccgaatcgaa gagaccgagc aggcagagcg cgagcagtgg ccaaccaagc acgatcacag
     5761 ccgcataagc gagtgcgagc accaagccgc gcatgttcat gcccgcggtt attgcgtgca
     5821 ggaccgcgaa gccgagcacg ccataagcga gcagcagact tgccgaaaaa acacccgcca
     5881 cgatcccgag caatccgtcg acaaagctca gggcaatcgc gagtgcgagt gcggcaatga
     5941 tggccggggg aaaggtcatg gcggaaagtt ccggccaggg ccgtgagagg cgacccgaaa
     6001 acttaacgat cctcgcagcc agccaaaggt tgagcagatt tgtaatcgtg gcgagcaccg
     6061 ccgccgcaac cggtatcgcg gtgaccagga aatcgatcag ccgatcggct ttgcccgcgc
     6121 caggcacgtc aaccgactcg ttgccagggc tgccgacctg ggtgcgcaga atcatgctca
     6181 gcgcgctgcg cagtccggtc cgaaaacttt cagcgtcggt gccaaaattc gggatcgcga
     6241 cgagcacaac cattgcgcca agaatcgccg cccacaggac cagccgcccg gggggatacc
     6301 attcgactgc cgtttgatgc tcgggcgcgt ccgcggctgg cgccgcaggc cgagcaagca
     6361 tcgcaaggta tccgagccac caccccggaa tgcctgcacc gaccatgaat gcaaacagga
     6421 aaacgacgcc gaaaaagatg cccagagcga ccgaaccggc aagggccgcg gtcaatgcgg
     6481 cccaatgact ccacccgaga ccggcgatca tgatcggcag cggcgccaga tagaacaacg
     6541 ggatcgataa caacgtgccc gaggtcaccg acgcgaatag cagggccgcc gcggccccgg
     6601 caccaatgcc tataactgcc agatgcatca tcacgagctg tcccgctcct tgagcggtta
     6661 gaggcggatc gaacctccgc cccaaccatc ggctttccgg taagcggaaa gcctcgctaa
     6721 tcttctactg tatcacataa ggcagaaggc cgagaaagcg cgcgcgctta atagcttgcg
     6781 ccagctcgcg ctgctttttt gccgacaccg cggtgatgcg actggggacg attttgcctc
     6841 gctccgatac gtagcgctgc agcagcttca cgtccttgta gtcgatcttc ggggcgttcg
     6901 cgccggagaa agggcaggtc ttgcgacggc ggaagaacgg acggcgagcg ccgccttgcg
     6961 gtgcgaatgc catggcttat tcctccgaga cgccgacgtc ttcgatttca tcgccgcgtc
     7021 gcctctcacc gcgtccgcgt tcgtcgcggt cgcgatcgga cttgcgcacc atcgcagacg
     7081 gaccttcctc gtgtgcttca acgcggatgg tgagatagcg cagcacatct tcgttgaggc
     7141 gctcttggcg ctcaatttcg ttgagagctg ccgccggcgc atccacgttg atcagcgtca
     7201 tatgcgcttt gcggttcttg cgaatccgat aagtgaggga cttcaaaccc caatattcgt
     7261 tcttcgtgac cttgccaccc atctgcccga taacgccgga cagttgcgtg gtcaaatcct
     7321 caacctgctg cgcgctcaga tcctggcgcg caagatagac atgttcgtat agcggcatga
     7381 atgcctttcc cttgttcaaa tccctgtcct cgatctcggc gccaagcccc tcgagccctt
     7441 cgggaaaggc tcgaatgctc tgaaggcgga agcacgggac gccggaccaa caggtcctgc
     7501 cggcttgaat tcgggccagc cgtccgttca gctcccaacc aggatcgatg gagcccgggg
     7561 tttatagggt tttttgccga aaaggcaagg caaaacaacg ctgcacgctt ttgcgatccg
     7621 cgcgcgcaat acgacctcta tacagcgtgt gtcccgccct cgtcgctttg aagccgatcg
     7681 gccagcttta cggcgaggtc ggcgccttcg cggatttgcc gtgcggtgtc accgttctgc
     7741 tgggccagac gcaatctttt gagtgcctcg aggagccggt tcaaattttg cgccaggaac
     7801 tgccggcgaa agaccggatc gatccgtgcc cgaacaagct catcctcggt aaccgggtcg
     7861 tacatcgcgc attggctcgc cgaatacagc tggaaatcat actcacaagt gtttgtcgca
     7921 aggttactgg aggcgggaaa cttgacagga ccgccggcga aggtgtcttt cggcccgatt
     7981 tatgggtgcg ggggaccagc ggacacagca tgtcagtcgc ttttgtattt ccgggccaag
     8041 gcagtcagtt tgttggaatg ggcaagtcgc tggcggcgaa cttcaccgcc gcgcaggatg
     8101 tcttcgacga agtggatacc gctctcgacg gcaaactcag cacggtcata ttcgaaggac
     8161 ccaccgatac gcttatgctc accgaaaatg cgcagcctgc cctgatggcg gtttcgttgg
     8221 ccgcgtttcg ggtgctggag caagaagcgg gcttcaggct gaagagcgat gcgcagttcg
     8281 tcgccggtca ttcgcttggt gagtattctg ccttggccgc ggcgggagcc ttcactatcg
     8341 ccgaggcggc gaggctgctg cgaacccgcg ggcaggcgat gcagaaggcc gtgccggtcg
     8401 gcgaaggcgc catggcggcg ctgatcgggc ttgaattcga cgcggcctcg gctgtcgcct
     8461 cgcaagccgc acagggcgaa gtgtgtcagg cggccaatga caatggtggc ggacaggtgg
     8521 tcgtttccgg ctcgaagcgg gcggtcgagc gtgcagtcga gatcgccaaa acgagaggtg
     8581 ccaaacgcgc aatgcttctc cccgtgtcgg cccccttcca ttgtgcgctg atgcagccgg
     8641 ctgccgatgt gatggccgag gcgttggcaa acgtgtcgat caaggcacca tcggtaccga
     8701 ttgtggcgaa cgttcttgcc tcgccggtgc aggatccggc gcagatcgtg cgcgccttgg
     8761 tcgcccaggt gaccggcacg gtgcgttggc gcgagtcgat tgcgtacatg gccggtgctg
     8821 gtgtcacgag tttctatgag gtcggtgccg gcaaggtgct cagtggcttg atcaagcgga
     8881 ttgccgacgg agccaccacc ggcgccatcg gcagcgcgga ggacgtcgcg tccttcaagg
     8941 cggggaggac cccatgatgt ttgatttgac cggcaagacg gcgttggtga cgggcgcgag
     9001 cggatcgatc ggtggcgcga tcgcgcgcgc tttacacgcc caaggtgcca tcgtggcggt
     9061 ctctggcacg cgccaagacg cgctcgatag catcgcggct gcgctgcgtg atcgcgtgca
     9121 tgttttgcct tgcgatcttg cggacaagga cgcagtggaa gcactggtgc ctagcgcgga
     9181 agaaaaaatg gagaagctgg atattctggt cgccaatgcc ggggtcaatc gcgataactt
     9241 gttcgtgcaa ttgcgcgacg aagattggga caaggttatc gcggtcaatc tcacggccac
     9301 gttccgactg actcgtgccg ccgtgtcgcg catgatgcgc cgccgctggg gtcgcgtgat
     9361 cgcgatttcg tcggtggtag gatttaccgg caatccgggg cagggaaact acaccgcctc
     9421 caaagccggc atggtgggaa tgataaaatc ggttgccgct gaatatgcca agcgcaacat
     9481 cacggcaaac tgcattgcgc ccggcctgat cgcttcggcc atgaccgaca agctcaacga
     9541 taagcagcgt gaggccattt tcgcgcgcat tcccgcagcc aagttgggca ctcccgacga
     9601 cgtagccgcg gccacggttt tcctagcctc gaatgaagcc ggttacgtca acggccaaac
     9661 catacacgtg aacggcggga tggccatgat ttagggcgtg tggtcggaaa tggaggtctc
     9721 gcgaagttca tgcgaggaga aggcggaaat gctgcccttt cagggcttgc tcgcctagcg
     9781 ttcgcgcgct agtcaacgct tttgaagtat ggtaaccgaa ctttggcccg gctggggcgg
     9841 ctaatcgcgg aagtcgttcc cgatattccg caattgggga tcgtctcatc accgtcaaac
     9901 acgacgaggc cgtaccgcga tggttgcgat ccagacttgg atggcagccc aatctaaaaa
     9961 gcacgaggtt ggaacgatga gtgacattgg cgagcgggtg aaaaagatcg tcgtggaaca
    10021 cctgggcgta gagcctgaca aggtgaccga tcaagcgagt ttcatcgacg atcttggcgc
    10081 cgacagcctc gacaccgtcg agctcgtgat ggccttcgaa gaggaattcg gctgcgaaat
    10141 tcccgatgat gccgccgaga cgatcctgac cgtcggcgac gcagtcaagt ttctcgaaaa
    10201 aaacgcaaaa agctgagcaa gcgggcacgg gcgctgctca atcgcttcgc cagattggct
    10261 attgagctgc gcaatgcagc ggcgcaataa tttcgcgcgg agccgggtat gagacgtgtc
    10321 gtcgtcacag gattgggaat gctcacgccg cttggctgcg gcgtggagcc gacctggacg
    10381 cgcctgctca acggcgagag cggcgccaag aaaatcgacc atttcgacgt ctcggacatc
    10441 gcctgcaaga ttgcttgcgt gattccacgg ggcgatggtt cgaacgcgac ctacaatccc
    10501 gatcagtgga tggagccgaa ggaacagcgc aaggttgacg agttcatcgt ctttgcaatg
    10561 tgcgccgctc ggcaggcgct cgatgatgcc ggatggcatc ccgagagtta tgaggatcag
    10621 accggcaccg gggtattgat cggttcgggc atcggcggga tcgaaggcat tgcggaaacc
    10681 gctattgcgc tgcacgagaa aggcccgcgg cgagtgtcgc cattcttcat accgggccgc
    10741 atcatcaatc tggcctccgg gttcgtatcg attgcattcg gattgaaagg gccaaaccac
    10801 gcggtcgtca ccgcgtgttc gaccggagct cacgctatcg gcgacgctgc ccgtctggtt
    10861 gctctcggcg atgccgaagt catggtggcc ggcggagcgg agtcgccggt gaatcgaata
    10921 tcgctggcgg gcttctcagc gctgcgcgcg ctctcgacga acttcaatga cgatccgact
    10981 cgcgcctcgc gtccttacga caaagaccga gatggctttg tgatgggaga aggcgcgggg
    11041 atcgtcgtgc tggaatcgtt ggagcacgcc aaagcgcgcg gcgcgaagat ctatgccgag
    11101 ctcatcggct acggtttgtc gggcgatgct tatcacataa cggcgccatc gccggacggc
    11161 gacggcgctt tgcgctgcat gagcgccgcc attcgccgcg ccggcatttc aaccggggac
    11221 atcgattaca tcaacgcgca cggcacctcg acgctgctag gcgacgagat cgaattgggc
    11281 gctgtacaga agctggtcgg caatgccgcc ggccgcatgt cgatgtcgtc caccaaatcc
    11341 tgtatcggac atcttctcgg cgcggctgga gccgtcgagg cgattttctc cgtcctcgcg
    11401 attcgcgacc aggttgcgcc gccta
//
LOCUS       DATDHO010000328         2797 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_263600, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000328 DATDHO010000000
VERSION     DATDHO010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2797)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2797)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2797
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263600"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            611..>2797
                     /locus_tag="VIY07_06305"
     CDS             611..>2797
                     /locus_tag="VIY07_06305"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY6381402.1"
                     /translation="MLTHDLSEALEQQMATSEVLKVVSQSGLELAPVLDKLVATAAGI
                     CLADSGFIFRLQGGLCRMVASFGIPPAYKDFQLRNPIVPDRGTLAGRTVLTRDTVHIE
                     DVTADPEYTRIEAVQLGHQRTMLGVPLVRDSALIGALTLARSRVAPFTNKQIALVQNF
                     ASQAVIAIENARLLSELRERTTELAESLEQQTATSEVLQVISSSRGGLEPVLQAILAH
                     ATRLCEANYGAMWLKEGDRFRNVAFHGELAAAYIEMWRNATISRAAPMGRVAQSRKPL
                     QIADLREDQSYLDGHPLTLTAVHAAGIHTLAIVPMLKEDEFVGAISLYRKEIRPFSDK
                     QIELVQNFASQAVIAIENTRLVNELRQRTDDLTTTLEQQTATADVLKVISRSTFDLKT
                     VLQTLIESAARLSEADQAIITRQIGGKFVRAEAYGFSSEFINYVRDVPVAPERGTVPG
                     RALLEGKIIHIPDVLADTDYTWSQAQRLGGFRTMLGVPMLREGVPIGVMVLTRSEVWP
                     FTDKQIELVATFADQAAIAIENVRLFEEEATARTAAEAARDAAERARTEAAASRDAAE
                     QARCEAEAANLAKSTFLATMSHEIRTPMNGVLGMIEVLERQGLTKDQRRIVVTMRESA
                     QALLRIIDDVLDFSKIEAGRLELEATSFSLSGLVEGVLDTFRPQVLAKGLTLDAEIDA
                     GSQDALVGDPTRVRQILFNLLSNAIKFTDDGGVRVHAGTMPLGGGST"
BASE COUNT          599 a          826 c          823 g          549 t
ORIGIN      
        1 cgctgcgtcg gctcatcctc gactacggca atgtgtgggc gaggctccat tttctgcgcc
       61 ttcagccccc tcggtgaagc tgggaagtgc tcaccagatg tccgctccaa gctaacactt
      121 gcgatttaat ttatcagcaa agccgttgcg tgccaccccc gcgaaaacga gcacggaacc
      181 ccaggcgtcg cggaacgtag ggccagcatc ttgggggcct tgcgcggtgt cacgatacga
      241 acgatacaaa tcacggcgcc ggcgacacac gcacgatacg ctggacggcc aaaatgccgc
      301 gccgcccaaa caccagtctt gtgtcacaga gttatggcag ctgcatctcg cttggaaatc
      361 gaccagagac cgccgtgtgt cggatcgcca tggccgtcct gtacccgaca attctggttg
      421 gtcctagtat ttaactgctt ccacttcact aggctgttgc cggtgcatga ttttctgctc
      481 atcgacaagc cacgtaacca tggtcaaacg ccttagaaaa ccagcatcgg ggtccgcttc
      541 gcggacccgg cgctcagcgc cccgaagctc gcgcaagccg cacgatgcgg atgccgaaac
      601 gaacgttgca gtgctcacgc acgatctttc cgaggcgctg gaacagcaga tggcgacctc
      661 cgaggtgctt aaggttgtta gtcagtctgg tctcgagctg gcgccggtgt tggacaaact
      721 ggtcgcgaca gcagccggta tttgtctcgc cgattcgggg ttcatcttcc gactccaagg
      781 cggcctctgc cgaatggttg cttcgtttgg aataccgccg gcatacaaag attttcagct
      841 gcgcaaccca attgtgccag atcgtgggac attagccggg cgaacggtcc tcacgcggga
      901 cacggtacat atagaagatg tgaccgccga tcctgaatac actcggattg aagcagtaca
      961 gctaggccac cagcggacaa tgctcggggt gccattggtc cgcgatagtg cgctgatcgg
     1021 cgcattaacg cttgcccggt cgagggtggc gcctttcacc aacaaacaga tcgcgctggt
     1081 ccaaaacttc gcctcccagg cggtcatcgc aatcgagaac gcgcggctac tcagtgaact
     1141 acgcgagcgc accactgagc tcgccgagtc tttggaacag cagacggcga cctccgaagt
     1201 attacaagtc atctccagtt cgcggggtgg gctggagccg gttttgcagg caattctcgc
     1261 gcacgcgacg cggctgtgcg aagccaacta cggagctatg tggctcaaag aaggagatcg
     1321 cttccgcaac gttgcattcc acggggagtt ggctgcggca tacattgaga tgtggcgaaa
     1381 cgctacgata agccgcgcgg cccctatggg ccgcgttgct caatcccgaa agccgcttca
     1441 gatcgctgac ctgcgagaag atcagagcta tctcgacggc catccattga ctcttactgc
     1501 cgtccacgcc gccggcattc acacattggc tattgtacct atgctcaaag aggatgagtt
     1561 cgttggcgcc atttcccttt atcgtaagga gatccgtccg ttcagcgaca agcagatcga
     1621 gctggtccag aacttcgcca gccaagctgt gattgctatc gagaacacgc ggctggtcaa
     1681 cgagctgcgc cagcgcactg acgacctcac cacgacattg gagcagcaga cggccactgc
     1741 ggatgtgctc aaagttatca gccgttcgac attcgacctc aagacggtgc ttcagacgct
     1801 gattgaatca gccgcgcgac tgtctgaggc cgatcaagcc atcataacgc ggcagatcgg
     1861 gggcaagttc gttcgcgcag aggcttatgg tttttcttcc gagttcatca attacgtcag
     1921 agacgtaccc gttgcgccag aacgtgggac ggttcctggc agagcactgc ttgagggcaa
     1981 gattatccat atccccgatg tattagctga cacggactac acctggtcgc aggcgcagag
     2041 actgggtggg tttcgcacca tgctcggggt tccaatgttg cgcgagggcg ttccaattgg
     2101 cgttatggta ttgacgcgct ccgaggtctg gccatttacc gacaaacaga tcgagctggt
     2161 cgccaccttc gccgatcagg cagcaatcgc gatcgaaaac gtgcggctct tcgaggaaga
     2221 ggccacggcg aggacagccg ccgaagccgc gcgtgacgcg gctgaacggg cacgcaccga
     2281 ggcggcggcc tcgcgcgacg cagccgagca ggcgcggtgc gaggcagagg ccgccaactt
     2341 ggcgaaatcg accttcctcg ccaccatgag tcacgaaatc cgaacgccta tgaacggcgt
     2401 gcttggcatg atcgaggtgc tggagcggca ggggctcacg aaggatcagc ggcgcatcgt
     2461 cgtcactatg cgagaatcgg ctcaagcatt gctgcgcatc attgacgacg tgctcgactt
     2521 ctcgaagatc gaggccggac gcctagaact cgaggctaca tctttctcgc tgagcggtct
     2581 ggtcgaaggc gtactagaca cattccgacc gcaggtgctc gccaaaggcc tcacgcttga
     2641 cgccgagatc gacgccggat cgcaggacgc tttggtcggc gatccgacac gggtacggca
     2701 aattctgttc aatctgttaa gcaatgccat taagttcaca gacgacggcg gggtgcgggt
     2761 gcacgcgggc accatgccac tcggaggcgg gagtact
//
LOCUS       DATDHO010000329         1641 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_411916, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000329 DATDHO010000000
VERSION     DATDHO010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1641)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1641)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1641
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_411916"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..124)
                     /locus_tag="VIY07_06310"
     CDS             complement(<1..124)
                     /locus_tag="VIY07_06310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2007 domain-containing protein"
                     /protein_id="HEY6381403.1"
                     /translation="MRELIRTNDAVLVSAVVALLESAGIRSLVFDQNMSVLEGSL"
     gene            242..1252
                     /locus_tag="VIY07_06315"
     CDS             242..1252
                     /locus_tag="VIY07_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEY6381404.1"
                     /translation="MAVVLPFESPNLASINRLSDLVAADMERVNSTILARTGSEVAMI
                     PEVANHLISSGGKRLRPMLTLAMAQLGGYSGDGHIKLAAAVEFMHTATLLHDDVVDES
                     DMRRGKIAARMLWGNEASVLVGDFLLGQAFKMMVEVGNLHALEILSSAAAVIAEGEVM
                     QLGTAKNTATNEDEYLAVIRAKTAELFAAACEVGPALAARKKAELAACRSFGMNLGIA
                     FQLIDDALDYGGKSAKLGKNVGDDFREGKITLPVVLSFRRGTESERVFWNRTLGQGDI
                     RDDDLDQAIALMAKYHSIEDTVGRARHYGAIAIDALALVPPSEIKTALEEAVAFCIGR
                     AH"
     gene            complement(1418..>1641)
                     /locus_tag="VIY07_06320"
     CDS             complement(1418..>1641)
                     /locus_tag="VIY07_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003612916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEY6381405.1"
                     /translation="LTPAARACSPVVGEVLQALETLPGVRLIRMSGSGPTCFALFSTP
                     SEAATAAQKLARERKDWWVQAATIGSGEL"
BASE COUNT          334 a          497 c          500 g          310 t
ORIGIN      
        1 cgagcgagcc ttccagcaca ctcatgttct ggtcgaacac cagcgaacga atgccggcac
       61 tttccaggag ggccactacc gcggagacca gaaccgcatc atttgtgcga atgagttcac
      121 gcatcgccaa gctaccctcg acacaaccct gccgctcaat tgcggaacac ggcaatctaa
      181 cgcacttgcc gcattggcgc agcgttcata tgctcgccct ttctcaattc cggagctgaa
      241 tttggctgtc gttctcccat ttgaaagtcc caacctcgcg tctatcaacc gcttgtccga
      301 tctggtggca gcggacatgg aacgggtcaa ctcgaccatt ctggcgcgca ccggctccga
      361 ggtcgccatg atccccgagg tcgccaacca cctgatttcc tcgggcggaa aaaggctccg
      421 tccgatgctg accttggcga tggcccagct cggcggctac tccggcgatg ggcacatcaa
      481 gctcgcagcc gccgttgaat tcatgcatac cgccaccctt ttgcacgacg atgtggtcga
      541 tgaaagcgat atgcgccgcg gcaagatcgc ggcacgcatg ctttggggca acgaggcaag
      601 cgtgctcgtc ggcgattttc tgcttggcca agccttcaag atgatggtcg aggtcgggaa
      661 cctgcatgca ctcgaaattt tgtcttcggc ggcggcggtg atcgcggaag gcgaggtgat
      721 gcaactcggc accgcgaaaa acaccgcgac caatgaagac gaatacctgg cagtcattcg
      781 cgccaagacc gccgaattgt ttgcggcggc ttgcgaagtc gggccggcgc tggcggcacg
      841 aaaaaaggcc gagctggcgg cctgccgctc gttcgggatg aatctcggca ttgcctttca
      901 gctcatcgac gatgcgctcg attacggcgg caagtccgca aagctgggca aaaatgtcgg
      961 cgacgatttc cgtgagggaa aaatcactct gccggttgtc ctgtccttcc gtcggggcac
     1021 ggaaagcgag cgcgtgttct ggaaccgaac gctggggcaa ggtgacatcc gcgacgacga
     1081 tcttgatcag gcaattgccc ttatggcgaa gtaccactcg atcgaagaca cggtcggacg
     1141 ggcgcgccac tatggcgcaa tcgccatcga tgcactggcg ttggtgccgc cgtccgagat
     1201 caagacggca ttggaagagg cagtcgcgtt ttgcatcggc cgcgcgcact aggcgggcaa
     1261 atccccctgg gcagtcacaa cggggaaggt gtgtagcaaa gcggcaattt ttccgttcat
     1321 tcccgcgtag gcgggaatcc agacgctgga tgtaaattgc aaagagcctg gggccccgct
     1381 ttcgcgggga cggacggaag aggtctctcg gtctcgatca cagctccccg gagccgattg
     1441 tcgcggcctg cacccaccaa tccttgcgct cacgggccag tttttgcgcc gccgttgcgg
     1501 cttcgctcgg cgtggagaac agggcaaagc acgtggggcc tgatcctgac atgcggataa
     1561 gcctgacgcc cggcagggtt tccaaggcct ggaggacctc acccaccact ggtgaacagg
     1621 cacgggccgc cggcgtgagg t
//
LOCUS       DATDHO010000330         2131 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_15738, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000330 DATDHO010000000
VERSION     DATDHO010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15738"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..495
                     /locus_tag="VIY07_06325"
     CDS             <1..495
                     /locus_tag="VIY07_06325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6381406.1"
                     /translation="WQGKIGEVDEAVLRESFELNFFAHQKVAQAAVNIMLKQGIGGCL
                     LFNISKQAVNPGPEFGPYGLPKAATLLLMRQYALDYGADGIRSNAVNADRIRSGLLTA
                     DFIAQRAKARGVSEKEYMAGNLLRREVTAEDVAQAFLHQALELKTTANVTTVDGGNIA
                     AALR"
     gene            565..786
                     /locus_tag="VIY07_06330"
     CDS             565..786
                     /locus_tag="VIY07_06330"
                     /inference="COORDINATES: protein motif:HMM:NF019389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PsiF family protein"
                     /protein_id="HEY6381407.1"
                     /translation="MLRILAIALVPVVLVATSAAAVTSEEKMETCKVGAESQKLQGAK
                     RDAFIKKCMAGGNYEPAARKNPGKQAKPQ"
     gene            complement(804..1814)
                     /locus_tag="VIY07_06335"
     CDS             complement(804..1814)
                     /locus_tag="VIY07_06335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY6381408.1"
                     /translation="MLDFASSSDVGDIGEAVIPPSSDTEILDAYSRAVTAVADTVGPA
                     VVRVEVRNEKGRPGGVGSGVIIAPDGLVLTNSHVVEGAKEVRLQDADGRVMDARRLGI
                     DPDTDLALLRAGSARDLPSAVLGDSKKLKRGQLVVAIGNPLGFESTVTAGVISALGRS
                     LRSRTGRLIEEVIQTDAALNPGNSGGPLVSSRGEVIGINTAVIMGAQGICFAVASNTA
                     QFVLSELIQHGRVRRAYIGVSAQTTAVPRRYARLAEIENSSGAMITALEPSGPAALSG
                     LMSLDTIVSADGEPIAGVDDLIRLLNGERIGRPVTINVLRRGALRSFEVKPLERPAAR
                     TA"
BASE COUNT          422 a          669 c          666 g          374 t
ORIGIN      
        1 tggcagggca agatcggcga ggtcgacgaa gctgtgctgc gcgaaagctt cgagctaaat
       61 tttttcgctc accagaaagt cgcgcaggcg gccgtgaaca tcatgctcaa gcagggcatc
      121 ggcgggtgtc tgctgttcaa catttcgaag caggcggtca acccggggcc ggaattcgga
      181 ccctatggtt tgcccaaggc agcgacattg ctcctgatgc gccagtatgc gctcgactat
      241 ggagccgacg gcatccgctc aaatgccgtg aacgccgatc gcatccgttc cggcctgctg
      301 accgcggact ttatcgcgca gcgcgccaag gcgcgcgggg tcagcgaaaa ggaatatatg
      361 gccggcaatc tgctgcggcg tgaggtaacg gccgaggatg tcgcgcaggc cttccttcac
      421 caggcacttg aattgaaaac caccgccaat gtcaccacgg tggacggcgg aaatatcgcc
      481 gccgcattgc ggtaacgggc gcgccattgt ccggggccgc gctatccttt attgcacttc
      541 gagatcaaaa aggagccaac aacgatgctg cgaatactgg ctattgccct cgtccccgtt
      601 gtgcttgtgg cgacctccgc tgcggccgtg acctccgagg aaaaaatgga gacatgcaag
      661 gtcggcgccg aaagccagaa attgcagggt gccaagcggg atgcgttcat caagaagtgc
      721 atggcgggcg gcaactatga gccggccgcg cggaagaacc cgggcaagca ggccaaaccg
      781 caatagcccc gccccggccc gacttacgcg gtgcgcgccg ctggccgctc cagcggcttc
      841 acctcgaagc tgcgcagcgc gcctcgccgc aagacattga ttgtgacagg ccttccgatc
      901 cgctcgccat tgagcagccg gataaggtcg tccacgccgg caatgggttc gccgtcggcg
      961 gacacaatgg tgtcgagact catcaatccc gacagggccg ccggcccgct cggctcgagc
     1021 gcggtaatca tcgcccctga cgaattttcg atctcggcca aacgcgcata tcgcctgggc
     1081 actgccgtcg tttgggccga cacaccgatg taggcgcgac gtacgcgacc gtgctggatc
     1141 agttcgctca gcacgaactg cgcggtattg ctcgcgaccg caaagcagat gccttgcgcg
     1201 cccatgatca cggcggtgtt gatgccgatg acttcaccgc gcgaggacac gaggggaccg
     1261 ccggaattgc cgggattgag cgcggcatcg gtctgaatca cttcctcgat caagcggccg
     1321 gtgcgcgagc gcagggaacg cccgagcgcc gatatcaccc ccgcagtcac ggtcgattcg
     1381 aacccgagcg gattgccgat cgccaccacg agctggccgc gcttgagctt cttggagtct
     1441 cccaacaccg cgctgggcag atcgcgcgcc gaaccggcgc gcaggagcgc caggtcagtg
     1501 tcaggatcga tgccgaggcg gcgcgcatcc atcacgcgcc cgtcggcatc ctgcaaacgc
     1561 acctctttgg cgccctcgac gacgtgagaa ttcgtgagca ccagaccgtc aggcgcgatt
     1621 atcacgccgg agccgacgcc gcccgggcgg cctttctcgt tgcggacctc aacgcgcacg
     1681 accgcgggac cgacagtgtc ggccacggca gtcacggcgc gagagtatgc gtcgaggatc
     1741 tcggtgtcag aggagggcgg tatcacagcc tcgccgatgt ccccgacatc ggacgacgaa
     1801 gcaaaatcga gcattggatc tcggggggtt gtggagcgtg aagctatgta ggtgcgcgcc
     1861 ggctgaaatg gaaggtgcgg gcagttttca ttcaaattgc gatcaattcc ttcaggctcc
     1921 ttcaagccca gcgagttaaa ttttcattca aagtggccat gttacggatc acctcatgac
     1981 gaccgggtca gtcacgccca agccccgccg cgccaagggc agcttcacgg gcggcgaagt
     2041 tacgcgcgct ttgatcgctt cggcggccat tggcggcata ctcttgctgg cggtcttcgt
     2101 gaccaccggc tcgtatttct ctgccgaaaa t
//
LOCUS       DATDHO010000331         2200 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_312734, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000331 DATDHO010000000
VERSION     DATDHO010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_312734"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(200..841)
                     /locus_tag="VIY07_06340"
     CDS             complement(200..841)
                     /locus_tag="VIY07_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY6381409.1"
                     /translation="MVQSAMLDNIPRKSADTRERLLELAESAVLAKGFAATSIDELIA
                     AAGISKSGFFYHFKDKSELAKGLLLRYLQQDRQLLEDIFRRGDDLNEDPLHGFLVGLK
                     LFAEMLADLPQAHPGCLAASFAYQDQLFNAEMRKLNADGMLAWRTRFRERLRIIAERY
                     PPRHEVDLDALADTAYTLVEGGLILGRVLQDTTILPRQILLFRDFVRMIFMPV"
     gene            1015..1980
                     /locus_tag="VIY07_06345"
     CDS             1015..1980
                     /locus_tag="VIY07_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018497356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HEY6381410.1"
                     /translation="MSKYRNSLPQLSGGLFLTDGGLETTLIFHDGIDLPLFASFDLLK
                     SERGTAVIRDYYERYIAIAKRNGTGFLLEGATWRASPDWAEKLGYSRTQLADVNRAAV
                     KLMAELRSKHETAQMPMVISANIGPRGDGYKIDKAMTAAEAEDYHGWQVSVFRDTEAD
                     LISAFTINYAEEGIGVARACKRAGIPSVISFTVETDGKLPSGQTIRDAIEQTDRETGN
                     APAYYMLNCAHPTHFADALRKGEAWTARLRGLRANASTRSHAELDAAPDLDIGDPADL
                     GRRYGALCRQFGHFTVLGGCCGTDHRHIEQISLACVPVDEAHARA"
BASE COUNT          433 a          696 c          698 g          373 t
ORIGIN      
        1 tttaatgtat gcgcgcgggc aggggtgtca atgcggcccg cggttcgaat acctgccatg
       61 aatctcactc cgttcgtccc cgcgcatagc cgtctgaagg acggcgtgct tccgcacgcc
      121 tatgcgggga cccagcgctg acgttgtgcc gaaagactag atgcccgctt tcgcgggcac
      181 gaacggagag tgggcggaac tagacaggca taaaaatcat gcgcacgaaa tcgcggaaca
      241 gcaggatctg ccgcggcagg atcgtagtgt cctgcaacac gcggcccagg atcaatccgc
      301 cttcgaccag cgtgtaggcc gtgtcggcca gagcatcgag atcaacctcg tggcgcggcg
      361 gatagcgctc ggcgatgatg cgcaggcgct cgcgaaaccg cgtgcgccag gcgagcatgc
      421 cgtctgcatt gagcttgcgc atctcggcgt tgaacagctg atcctggtac gcgaaggagg
      481 ctgcaagaca gccgggatgc gcctgcggaa ggtccgcgag catttcggcg aacaacttca
      541 gcccgaccag gaagccgtgc agcgggtctt cgttgaggtc gtcgccgcgg cggaaaatgt
      601 cttcgagcag ctgccgatcc tgctggaggt accgcagcag cagccccttg gcgagttcgc
      661 tcttgtcctt gaaatgatag aagaagccac ttttggaaat gccggctgcc gcgatcagct
      721 catcgatcga ggtcgccgcg aagcccttgg caagcacggc gctttccgcg agctcaagca
      781 ggcgctcccg ggtgtcggcg ctcttgcgag gaatattatc gagcatggcg gactgtacca
      841 tgagtgcagt tgcgcgcccg ccgccgcgcc gaaacgccgc gccccgcgat tatcccgtta
      901 gaatttcaca cgaaaaaatc cggcttggct tgaccgcgag taggcttacc aagcggcggc
      961 atgcgcgata gttgtcccgc caagccaaat cattcacgaa cgacggaacg tgccatgtcg
     1021 aaataccgca actcgttacc gcaactgtcg ggaggcctgt ttctcaccga cggcggcctt
     1081 gagaccacgt tgatcttcca cgacgggatc gacctgccat tgttcgcgag cttcgacctc
     1141 ctcaagagcg agagaggcac cgccgtcatt cgcgactatt acgagcgcta cattgcgatc
     1201 gcaaagcgca acggcaccgg gttcctgctg gaaggcgcca cctggcgcgc cagcccggac
     1261 tgggccgaga agctcggcta ctcgcgcacg caactcgccg acgtgaaccg cgcggcggtg
     1321 aagctgatgg cggagctgcg gagcaagcac gaaaccgcac agatgccgat ggtgatttcc
     1381 gccaacatcg gaccgcgcgg tgacggctac aagatcgaca aggcgatgac cgccgccgag
     1441 gccgaggact atcacggctg gcaggtgagc gtgttccgcg ataccgaggc ggatctcatc
     1501 agcgccttca cgatcaacta tgccgaggag ggcatcggcg tggcgcgcgc gtgcaagcgc
     1561 gccggcatac cgtcggtgat ttcattcacg gtcgagaccg acgggaagct gccaagcggg
     1621 cagacgatcc gcgacgccat cgagcagacc gatcgcgaga ccggcaacgc gcccgcctat
     1681 tacatgttga actgtgcgca tcccacgcat tttgccgatg cgctgcggaa gggcgaagcc
     1741 tggaccgcgc ggctgcgcgg cctgcgggcg aatgcctcga cgcgcagtca tgccgagctc
     1801 gatgcagcac ccgatctcga catcggcgat ccagccgatc tcggccggcg ctatggcgcg
     1861 ctgtgtcggc agttcgggca cttcaccgtg ctcggcggtt gctgcggcac cgaccaccga
     1921 cacattgaac agatttcgct cgcttgcgtg cccgtcgacg aggctcacgc gcgcgcctga
     1981 gggttcggtc tggttaccgg cggttacaaa tcccgtttca tccccgtact cgggtccagc
     2041 cttcggctgg cccgagcaca ggccccagcg ggatccagtg ctgacgctgt gccagctaaa
     2101 actgggtgcc cgcttgcgcg ggcacgaacg gagaatggga agagcgtgca caaactctcg
     2161 cccgttcgtc ctcgcaaaag cggggaccca gcagacactt
//
LOCUS       DATDHO010000332         2172 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_15877, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000332 DATDHO010000000
VERSION     DATDHO010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2172
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_15877"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1123)
                     /locus_tag="VIY07_06350"
     CDS             complement(<1..1123)
                     /locus_tag="VIY07_06350"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEY6381411.1"
                     /translation="MSYSSPQYYPAVEGVRQAEPKARSAAAISRHLQRTHNGYTLAHG
                     GHQIRIGPVAFWIVVGALVIMAVWSIATGTYFAFRDNVLTRLIGRQTEMQFAYEDRIA
                     ELRSQVDRIMSRQLLDQEQFEKKLNTLLQRQATLEQRTAALSGDPSTTGTIKPARTAP
                     AAIIPAEKPARVRPISDTVIFVAPPDREARLQSRELLTTATRIAESAAAGGVGGALAR
                     ISLSLDKVEQKQAATLTNLEERIDTRARRMQSVLADLGISAGRLPAEGATGGPFVPLK
                     PPQSGASAFERQLYRVHMARAQIDRYRQTLTAVPVRKPVAGETDMSSPFGMRMDPFLG
                     RPAVHTGIDLRGDVGEPVRATATGKVSIAGREGGYGNMVE"
     gene            complement(1248..1718)
                     /locus_tag="VIY07_06355"
     CDS             complement(1248..1718)
                     /locus_tag="VIY07_06355"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF020123.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY6381412.1"
                     /translation="MARELVAGAKAPPFTLPGDGSSKVSLKDFKGSNLVLYFYPKADT
                     PGCTKEAIAFSRLRGDFAKAGTAILGVSADPVAAQDKFKSKHKLSIALGSDETRKMLA
                     AYGAWGEKSMYGRKFMGVLRKTFLIDGAGRIVRIWPKVSVAGHAEDVLAAAREL"
BASE COUNT          386 a          647 c          687 g          452 t
ORIGIN      
        1 tctcgaccat gtttccatag ccgccctccc gaccggcgat gctcaccttg ccggtcgctg
       61 tcgcgcgcac gggctcaccg acatcgccgc gcagatcgat gccggtatga accgccggtc
      121 gacctaaaaa cggatccatg cgcatgccaa atggcgagct catgtcagtt tcgccggcga
      181 cgggctttcg cacgggcacc gccgtcagcg tctggcggta ccggtcgatt tgcgcgcgcg
      241 ccatgtggac gcggtaaagc tgccgctcga acgcgctggc gccgctttgc ggcggcttga
      301 gcggaacgaa cggtccgccg gtcgctccct cggccggcag acgaccggcg ctaattccga
      361 ggtcagccag cacgctctgc atccggcgcg ctcgcgtgtc gatgcgctct tcaagattag
      421 tgagggtggc agcttgtttt tgctcgactt tgtcgagcga caatgaaatg cgagccaacg
      481 cgccaccgac gccgcccgcc gcggcgcttt cggcaatgcg agtcgcggtt gtcagcaatt
      541 cgcgagattg cagccgcgct tcgcgatccg gaggagctac gaagatcacg gtgtcgctga
      601 tagggcgaac ccgcgcaggt ttctccgccg gaataatcgc cgctggtgcg gtgcgcgcag
      661 gtttgatggt gccggtggtc gatggatcgc cgctgagtgc cgcggtacgt tgttcaagcg
      721 ttgcctgtcg ttgaagcagt gtgttgagtt ttttctcgaa ctgctcctga tcgaggagct
      781 ggcgactcat gatgcgatcg acctgggagc gcagttcggc aatgcggtcc tcatacgcga
      841 attgcatttc ggtttgccgt ccgatcaatc gggtcaggac gttgtcgcga aatgcaaaat
      901 aggtgccggt cgcaattgac caaaccgcca tgatcacgag tgcgccgaca acgatccaaa
      961 aggccaccgg gccaatccgg atttgatgcc cgccatgcgc aagcgtgtag ccgttgtgtg
     1021 tccgctgcag gtgacgggag atagcggcgg ctgaccgcgc ctttggctcc gcctggcgaa
     1081 ctccctcgac ggctggataa tattgagggg acgaatacga catcgacgct ccgcggccct
     1141 ggccgctgtc gagccatagg tccagcgcat cgatatcagt cggatatagt taagaaacct
     1201 gtaatcccga tggggtattg atttcgttca tcggtcactg cagggactta gagttcgcgg
     1261 gcagcagcca gcacatcttc cgcatggcct gcgacgctga ctttcggcca gatccggaca
     1321 atccggccgg cgccatcgat cagaaaggtc ttacggagga cgcccatgaa tttgcgcccg
     1381 tacatcgatt tttctcccca ggcgccatag gctgccagca tctttctggt ttcgtcagat
     1441 ccaagggcaa tggagagctt atgcttcgac ttgaacttgt cctgggctgc tacggggtcg
     1501 gccgaaaccc cgaggatcgc ggttccggcc ttggcaaaat cgccgcgcaa gcgtgagaat
     1561 gcgatcgcct ccttggtgca gccgggagta tcggcttttg gatagaaata aaggacgaga
     1621 ttgctgccct tgaaatcctt gagcgagacc ttgctgctgc cgtcgccggg cagcgtaaaa
     1681 ggcggcgctt tcgcgcctgc aacgagttct cgcgccatat gccttccttt cgtcgctttc
     1741 gagcggtcat gtcgggcatg ccatttgcgt gggaggggcg caacgggttc catatttttg
     1801 tgccgtgagc cgcgcccggt atttgtccgc ccaccggaaa cgtacgcgtg catcgccaga
     1861 cgaagggcgc aacctatatt atgacgggga gcgagcacga acacgggcac cgcgcccacg
     1921 ctgtcgccgc gggtcatgcg ccgcaccgac gtcgaatgaa gcctcgactt gctcgatggc
     1981 atcgacattg gaccggtctg tggggccagc ggtggactgg cctatggtct caaagttgga
     2041 tcggtcgatg gccccgagag tggaccggcc tatggccgcg aaagtggacg ggcctgcggc
     2101 gctggacatt caagtttgtt cgctcgcggc tcgcgctgcg gctgcttatg ggctcggccg
     2161 tctgctttgc ca
//
LOCUS       DATDHO010000333         8332 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_361853, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000333 DATDHO010000000
VERSION     DATDHO010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8332
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_361853"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="VIY07_06360"
     CDS             <1..291
                     /locus_tag="VIY07_06360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381413.1"
                     /translation="NLMEEPPLVSLNTMSVRQTFWGRTREPPARSSLFMVERPPAIKF
                     DNRAKVPWGMVIGSSSACASTYLKLLIKLRGVRQIAISFRQKITAIHSVTGD"
     gene            419..2212
                     /locus_tag="VIY07_06365"
     CDS             419..2212
                     /locus_tag="VIY07_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY6381414.1"
                     /translation="MPRMKGADVIIEYLIESKIPHVFGLCGHGNVGILDSLYEARDRI
                     TLISPRHEQVAAHMADAYFRVRHEAVATLTSCGPGSCNIVMPLAVALSDSSALLAITA
                     NVPTSQFNRSPFQEINRHFQADFPNIIRPVVKRSFQPTRVDMLPLALRQATTTMLSGR
                     PGPVNLDVPFNVFQEEGDIEMPQPSPPLNAQRSGASPDEITACLDLILKSKRPVLFVG
                     HGVTLSEASRELTEFAHRLQIPVISSPNGMGTLDMADPLSLGFIGRNGAYPANEAGRR
                     ADLVIAIGARFDDRSASSWMPGYSWNFPHTKLIHADVDAAELGRNYPPDIGVLADART
                     FLRQLLAEIERRNLRREAPQAWRADIQKWQAEWEKFTRPNFEVHASPIRPERVVADCQ
                     AVLPSDAILCCDVGVNHNWYMQFWKARRPQTMLNSWGFSGMGFGAAGALGAKLAAPDR
                     PVVAVTGDGCFTMVPHVLCTAVEYKIPVVWLIWNNFGWVSIRDIQLGMFGGREHGTMF
                     HEGPNNKPYNPDFAAWARAAGVDAITVTKSQDLKGALEHAVQANKPFVLDVHVDAEVR
                     PPSTGAWQLPPTPYKEPVFGKRFVPDAAPAK"
     gene            2256..3128
                     /locus_tag="VIY07_06370"
     CDS             2256..3128
                     /locus_tag="VIY07_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEY6381415.1"
                     /translation="MRAQRKQRAAAAGRPGASSRIAAMRDVARDHQRVGVQSLARAFT
                     IMEEIARNRDGIGLAELSKRVGLHNSTTFHLVKTMVSLGYVRQMKDSKRYRIGRPLFA
                     LAASALDEVEMVSLATPVLEELSRETGESAHFAVRQGDAVVVLARTGGKGAFQLTDRA
                     GALRPAHCTALGKIMLAALTPEHFEQFIARAALEAHTPKSITSAELLRREIAEVRRSG
                     IAFDDGEFDAEVRCAALPVRDFSGQVTGAIGVSGPIWRLSIEALQKRARQVRFAADRL
                     SAEFGYAGDIKAAV"
     gene            3146..4099
                     /locus_tag="VIY07_06375"
     CDS             3146..4099
                     /locus_tag="VIY07_06375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010909834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEY6381416.1"
                     /translation="MLRHANYVPQGVIPAVLLPFDNDFAIDQTSFRKHLRDVAAVEGL
                     SAITVNAHSTEVGSCSFEEQKRVLEVAQDEIGARLPLVNGIWADGSIEAARIARMATQ
                     GGASALLVFPPAPFTLGQSPAMALAHFKRIADVSDLPLIVFQYPLATRQGYPKETLLK
                     LCEEVPSIRAIKDWIGNVPHHEWHVRALQNLPRPVNVLTTHSSWLFPSLVLGCNGLLS
                     GSGSVIADLQAKLFRAVKNNDLAEAKRLNDRIEPTARVFYADPFVDMHNRMKEALVLL
                     GKLPRAVVRPPLVKLERREIALIRQALIEAGLLDKNARDAA"
     gene            complement(4118..4933)
                     /locus_tag="VIY07_06380"
     CDS             complement(4118..4933)
                     /locus_tag="VIY07_06380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydro-lyase"
                     /protein_id="HEY6381417.1"
                     /translation="MSLASQRRKDQSEPSSGLSARLAIRAGTHRGPTAGLAPGNVQGN
                     LAILPQALAADFLHFCHLNPKPCPLIGTSAPGDPRVPALGDDLDIRTDLPRYRVWKNG
                     ELVAEPEDVRQFWRDDLVSFVIGCSFSFEEALLAEGIELRHITRGCNVPMYRTSIATK
                     EVGPFHGPMVVSMRPMTPRDAIRAVQITTRFPSVHGAPVHIGKPELIGIKDISKPDYG
                     DAVEVRNDELPVFWACGVTPQAVIATVKPEFCITHYPGSMLVTDRKNTEFAIL"
     gene            5307..6608
                     /locus_tag="VIY07_06385"
     CDS             5307..6608
                     /locus_tag="VIY07_06385"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381418.1"
                     /translation="MSEKWKEEGWAQDFWYSGKVTRRRIVGWGGGAIGALMLVPAPWR
                     EAFGQAKPYKIGAINPLSGAAAAGGKTALVGVQMAVDRINKAGGVNGRPIELIIADDE
                     SKPDVGRRKTSKLVDEDLIDAHCGGFLSNICLACMPVWEEAKIVNMISVCLDTTLTTT
                     KCNRYSFRVHDYAPAQAVAISPYLISKMGKKWHIAFADYSWGQSTRDAYADQIKKAGG
                     EIVGTTGIPLGTADMTPFLSKITGEFDGLFGIFFGKDGVTIGNQAYDLGLTRKYKWAG
                     DGAIAESTNLPALGNKIEGFVGINRYIPVQAGPFDTPQHKKFFDEAKERLAKIDPSGP
                     LPDRYVQSNFEAMNALKVGMEKSKFRGREDTMKLIEALEGLQMKLSDDFPTGDKLLRK
                     EDHQAFPLQVIFDIKDGKHRILETIPGDKTFFPPACKFATT"
     gene            6615..7406
                     /locus_tag="VIY07_06390"
     CDS             6615..7406
                     /locus_tag="VIY07_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020094436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381419.1"
                     /translation="MQPVVDVAAPASNAGAGTQVPVLSTEGLTRRFGGLTAVNNVNFQ
                     VNREEIRAIIGPNGAGKSTFFNCLTGVIPPSSGRIFFNGEDITGLPPDRISLKGIARS
                     YQITNILPNATTLENVRIAAQSRRHAWNMLKHRNAFHDIIEKAEAVLKSVSLYAKADE
                     LAANLSHGEQRNLEIGIALATEPQLLCLDEPTAGMSSAETRDTVQLVRSIAKNLTILI
                     VEHDMEVVMGLADRITVLNYGQVLAEGTPAEIQSNPKVLEVYLKT"
     gene            7403..8137
                     /locus_tag="VIY07_06395"
     CDS             7403..8137
                     /locus_tag="VIY07_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381420.1"
                     /translation="MNSSANSLPLIAVEDLHTYYGKSHILHGVTLHVGPGEVVGLLGR
                     NGVGKSTTLKTIMGLVRPTEGSVRLGGQPITGLAAHKLARLGIGYVPEDRRIFRLLTV
                     MENLRTGLDRQGVADAKKQELLDKVFTYFPVLAERRNQAGGTLSGGEQQMLAIARAMM
                     LEPKIILLDEPTEGLMPRMVSQIRNIVDVLHRDNVAILLVEQNVPLTLEASDRVYIME
                     KGAVRHHAAARDLKVDDAIIHQYLGV"
     gene            8139..>8332
                     /locus_tag="VIY07_06400"
     CDS             8139..>8332
                     /locus_tag="VIY07_06400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381421.1"
                     /translation="MELIAILNAIPWDQILIQTVNGIVTGMILALIASGLTLIFGIMD
                     VVNFAHGELFMLGAYIGVVVL"
BASE COUNT         1717 a         2438 c         2523 g         1654 t
ORIGIN      
        1 aacctcatgg aagagccacc gttggtaagc ctcaacacca tgagcgttcg ccagacattt
       61 tggggcagaa cccgcgaacc tcccgcccgc tccagcctat tcatggtgga gcgcccgcca
      121 gcaattaaat tcgataatcg agcgaaagtt ccctggggaa tggttatcgg cagtagttcc
      181 gcctgcgcct ctacgtattt gaaattattg ataaaattac gtggcgtacg gcaaatagca
      241 atctctttca ggcaaaaaat taccgcaatt cactcagtta ccggcgatta agtgagccgc
      301 gtcgttgagc tcttttggag aaaagtggct tcggccccca cattgtcggg actagccgat
      361 atggtaaaaa acgctctcgc attatcgcaa gcaattttag aagtgagggg cgccaacgat
      421 gccgcgcatg aagggtgccg atgtcattat cgagtatctg atcgaaagca aaatcccaca
      481 cgtttttgga ctctgtggtc acggaaacgt tggcattctt gattctcttt atgaggcgcg
      541 cgaccgcatc acattgattt cgccgcgcca tgagcaggtc gcagcgcaca tggccgacgc
      601 gtatttccgc gtaaggcatg aggcggtggc gacactgaca tcctgtgggc ccggctcctg
      661 caacatcgtg atgccgcttg cggtggccct ttccgattct tcggcgctcc tggcaattac
      721 cgcaaacgtt ccgacctcac agttcaatcg cagtccgttt caggaaatca acaggcactt
      781 ccaggccgat tttccgaaca tcattcgacc cgtagtcaaa cgcagcttcc agccgacccg
      841 cgtggatatg ttgccgcttg ctttgcgtca ggcgacgacg accatgttgt ccggccggcc
      901 gggtccggtg aatctcgacg tgccgtttaa cgtttttcag gaagagggcg acattgaaat
      961 gccgcagccg tcgccgccgc tgaatgccca gcgcagcggc gcgtcgccgg acgaaatcac
     1021 cgcctgcctc gatctgattt tgaaatcgaa gcggccggtg cttttcgtcg gacatggcgt
     1081 cacgttatcg gaggcatcgc gcgagctcac ggaattcgct cacaggctac agatcccggt
     1141 gatctcatcg cccaacggca tgggcacgct tgatatggca gatccattgt cgctcggttt
     1201 catcggccgc aacggagcct atcctgcaaa cgaggcaggc cgccgggccg atctggtgat
     1261 agcgatcggc gcgcggttcg atgaccgttc ggcatcgtca tggatgcctg gctattcctg
     1321 gaattttccg cacaccaaac tgatccatgc ggatgtcgat gcggccgagc ttggtcgcaa
     1381 ctatccgccc gatattggcg tgctggcgga tgcgcgcacc ttcctgcggc aattgctcgc
     1441 cgagatcgag aggcgcaatc tgagacgcga ggcccctcag gcctggcgcg cggacattca
     1501 gaaatggcag gccgagtggg aaaagttcac tagacccaat ttcgaagtac acgcttcgcc
     1561 gatcaggccg gaaagggtcg tcgcagattg ccaggcggta ctgccctcag acgctattct
     1621 gtgctgcgat gtcggggtca atcacaactg gtacatgcag ttctggaagg cgcgccgccc
     1681 acagaccatg ctcaactcct ggggcttttc cggcatgggg ttcggggcgg cgggcgcgct
     1741 tggggccaag ctggcggcgc ccgacaggcc ggttgttgcg gttaccggcg atggctgctt
     1801 cacgatggtg ccgcacgttc tgtgcacggc ggtcgaatac aaaattccgg tcgtctggtt
     1861 gatctggaac aattttggtt gggtttccat tcgcgacatc cagctcggaa tgttcggcgg
     1921 ccgcgagcac gggacgatgt tccacgaggg acccaataac aaaccataca atcccgactt
     1981 tgcagcctgg gcgcgtgcag ccggtgtcga cgcaataacc gtgacaaaat cgcaggatct
     2041 caagggcgca ctcgagcacg ccgttcaagc gaacaagcct ttcgttctcg atgtacacgt
     2101 cgacgcagaa gtgcggccac catcgaccgg cgcctggcag ttgccgccga cgccttacaa
     2161 agagccggtg ttcggcaagc gctttgtgcc cgatgccgct ccagcgaaat gaaaaggcaa
     2221 aactagctgc cggggcagcg aatggagacg acttcgtgag agcgcaacgc aaacagagag
     2281 cggctgctgc cggccgacca ggagcctcgt cgcgcatcgc tgccatgcgc gacgtcgcac
     2341 gggaccatca gcgtgtcggc gtacagtccc ttgcgcgggc tttcacgatc atggaagaaa
     2401 tcgcgcgcaa tcgcgacggc ataggtttag ccgaattgag caaacgcgtc ggactgcaca
     2461 attcgacgac tttccatctc gtgaaaacca tggtgtcgct cggctacgtg cggcagatga
     2521 aggattcgaa gcgctatcgc attggccgtc cgttgttcgc cctggcggcc agtgctctcg
     2581 acgaagtgga gatggtcagt ctggcaacgc ctgttctcga agagctatcg cgggagaccg
     2641 gcgagagcgc gcattttgcc gtgcgccagg gcgatgccgt ggtcgtgctc gcccgcacgg
     2701 gcgggaaggg tgcctttcag ctgaccgatc gcgcaggcgc gctgagaccc gcgcactgca
     2761 ccgcgctcgg caagatcatg ctggccgctc tgacacccga gcatttcgaa caattcattg
     2821 cgcgcgccgc gcttgaggcg cacacgccga agtcgatcac gtcggcggaa ctgcttcgcc
     2881 gcgagattgc cgaagtgcgt cgctcgggca ttgccttcga cgatggtgag ttcgatgccg
     2941 aggtccgctg tgccgcgctg ccggtgcgcg atttcagcgg acaagtcaca ggcgccattg
     3001 gcgtttccgg gcctatctgg cggttatcca ttgaagcatt gcaaaaacgc gcgcggcaag
     3061 tgcggtttgc tgccgatcgc ctttccgcgg aattcggcta cgctggcgat atcaaggcag
     3121 ctgtgtagat cgggaggaac tcaccatgct acggcacgcg aactatgttc cccaaggcgt
     3181 gattccggct gtactgctgc cgttcgataa tgattttgca atcgaccaaa cgagcttccg
     3241 caaacatctg cgtgacgtgg cagcggtgga aggcctgtct gcgattactg tgaacgcgca
     3301 ctccaccgag gtcggctcgt gcagtttcga ggagcagaaa cgcgtgctcg aggtcgcgca
     3361 ggacgagatc ggtgctcggc tgccactggt caatggcatc tgggccgacg gcagcatcga
     3421 agccgcgcgc atcgctcgca tggcgacgca gggcggtgct tcggcgctgc ttgtgtttcc
     3481 gcccgcgcca ttcacgctcg gacagtcacc ggcgatggcg cttgcgcact tcaaacgcat
     3541 cgccgacgta agcgatctcc cgctgatcgt gtttcaatat ccgctggcaa cgcgtcaagg
     3601 ttatccgaag gagacgttgc tgaagctctg cgaggaagtg ccgtcgatcc gcgcgatcaa
     3661 ggactggatc ggcaacgtgc cgcatcatga atggcacgtg cgcgcgttgc aaaatctgcc
     3721 gcgtccggta aacgtgctga ccactcacag ctcgtggctg ttcccgtctc tcgtgctcgg
     3781 ctgcaacgga ttgctgtcag gctccggcag cgtgatcgcc gatttgcagg cgaaattgtt
     3841 tcgcgctgtt aagaacaatg atcttgcaga agcgaagcgc ctcaacgacc ggatcgaacc
     3901 gactgcgcgc gtgttctacg ccgatccgtt tgtcgacatg cataaccgca tgaaggaagc
     3961 attggtcctt ctcggcaagc tgccccgcgc cgtggtgcgc ccgcctctgg tcaagcttga
     4021 gcgacgcgag attgccctta tccgtcaggc gctgatcgag gcgggtttgc tggacaagaa
     4081 tgcaagagac gcggcttgag cctgtcgtca ccaacgctca caaaatcgca aactcggtat
     4141 tcttcctgtc cgtcaccagc atgctgcctg gatagtgcgt aatgcagaat tccggcttca
     4201 ctgttgcgat caccgcctga ggcgtcacac cgcaggccca gaatacaggc agctcatcgt
     4261 tgcggacctc gacagcatcg ccgtagtccg gcttgcttat gtccttaatc ccgatcagct
     4321 ccggtttgcc gatgtgaacc ggcgcgccat gcacggatgg aaaccgcgta gtgatctgaa
     4381 ccgcgcgaat ggcgtcgcgc ggcgtcattg gccgcattga tacgaccatc ggtccgtgga
     4441 aaggcccaac ctccttcgtg gcgatcgacg tgcgatacat tgggacattg cagccgcgcg
     4501 tgatgtggcg cagctcgatg ccttcggcca gcaaagcctc ctcgaatgaa aacgagcagc
     4561 caatcacgaa gctgacgaga tcatcgcgcc agaactgacg cacatcctcc ggctcggcga
     4621 caagttcgcc gtttttccac acgcggtagc gcggcagatc cgtgcggata tcgagatcgt
     4681 cgcccagtgc cggcacgcgc ggatcgcccg gggcggaggt gccgatcagc ggacagggtt
     4741 tgggattgag gtggcagaag tgcaggaaat cggccgccag cgcctgcggc aaaatggcaa
     4801 ggttaccctg cacgttgcca ggcgcgaggc cggccgtagg accgcgatgc gttccggccc
     4861 tgattgcaag gcgcgccgaa agcccgctgc tgggctccga ttggtctttt cggcgctgcg
     4921 aggcaaggct catcaacctc tccgttgcgg cgagcctaac atcagctgcc gcttcgttcg
     4981 agcgttctgc ttaattcacg ggcagccgca tacgaccatg tgagtggcgt tgcatcaata
     5041 tgcatatatc ggttgaaagt tgcggcggga tcgcgtttgc taatggcatc aagagcctga
     5101 acaggggccg gcaggggagg atcggcaatg ccgcgtcgtg ccatcgggca taggcgtgcg
     5161 agcgcttccg tggtttcacc ctggcgtgcc gtgctgccgg catttgggcc aaacagcttt
     5221 tttactgccg cgtgcggctc tgcctctgac gttcgcacgg acgcgaactg atcggcacgc
     5281 atgcgatcca gagggaggat catgagatga gtgagaagtg gaaagaggag gggtgggcgc
     5341 aggacttctg gtacagcggc aaagtgactc gtcgccgtat cgttggctgg ggcggcggcg
     5401 cgattggcgc gctgatgctg gttccggcgc catggcggga ggccttcggg caagccaagc
     5461 catacaagat cggtgccatc aatccgcttt caggcgcggc tgccgcgggt ggcaaaaccg
     5521 cactggtcgg cgtccagatg gctgtcgatc gcatcaacaa ggcaggcggc gtgaacggtc
     5581 gcccgatcga actgatcatc gcggacgatg aatcgaagcc tgatgtggga cgccgcaaaa
     5641 caagcaagtt ggtcgacgag gatctgatcg acgctcattg cggcggcttc ctgtcgaaca
     5701 tctgcctggc ctgtatgccg gtctgggaag aagccaagat tgtcaacatg atcagcgttt
     5761 gcctcgacac gacgctgacg acaacgaagt gcaatcgcta cagcttccgc gtccatgact
     5821 acgcgccggc gcaggccgtt gccatttcgc cctatctcat cagcaagatg ggcaagaaat
     5881 ggcacatcgc gtttgcggac tattcctggg gccagtccac gcgcgatgct tatgcggatc
     5941 agatcaaaaa ggctggggga gaaatcgtcg gcacgaccgg cattccgctc ggtaccgccg
     6001 acatgactcc gttcctctcc aagattacgg gcgagttcga cggactcttc ggaatcttct
     6061 ttggcaagga cggcgtcacc atcggcaacc aggcctacga tctgggcttg accagaaagt
     6121 acaaatgggc cggtgacgga gcgatcgcag aatcaacgaa ccttcctgcg ctcggcaaca
     6181 agatcgaggg ctttgtcggc attaaccgct acattcccgt tcaggcaggc ccgttcgaca
     6241 caccgcagca caagaagttc tttgacgagg cgaaggagcg actggcgaag attgatccgt
     6301 caggaccgct gcccgatcga tacgtccaat cgaactttga agccatgaat gcgctcaaag
     6361 tcggcatgga gaaatcgaaa ttccgcggcc gcgaagacac gatgaagctc atcgaggctc
     6421 tcgaaggcct gcagatgaag ctgagcgacg acttcccgac cggcgacaag ctgcttcgca
     6481 aggaagatca ccaggcattc ccgttgcagg tcattttcga catcaaggac gggaagcatc
     6541 gcattcttga aacgataccc ggcgacaaga cgttcttccc gccggcgtgc aagttcgcca
     6601 cgacctaagc gtcgatgcag cctgttgttg acgtggccgc cccggccagc aatgccgggg
     6661 cgggtacaca agtccccgtg ctgagcaccg aggggctgac gcggaggttt ggcggactca
     6721 ccgcggtcaa caacgtcaat tttcaggtca accgcgagga aattcgcgcg atcatcgggc
     6781 cgaatggcgc cggcaaaagc acgttcttta attgcctgac gggagtgata ccgccgagct
     6841 ctggtcgcat cttctttaac ggcgaggata ttaccggact tccgcccgac aggatttcgc
     6901 tcaaggggat cgcgcgctcc tatcagatca ccaacattct gccgaatgcg acaacgcttg
     6961 aaaacgtgcg catcgccgca caatcgcgcc ggcatgcctg gaatatgctt aagcaccgca
     7021 acgcttttca cgacatcatc gagaaagccg aggcggtgct taagtccgtg agcctttacg
     7081 ccaaagccga cgaactcgcc gctaatcttt cgcatgggga gcagcgcaac ctcgaaatcg
     7141 gcatcgctct cgccaccgag ccgcaattgc tctgcctcga tgagcccacc gccggaatga
     7201 gttcggcgga aacgcgcgat acggtgcagc tggtgcgtag catcgccaag aatctgacca
     7261 tcctgatcgt agagcacgat atggaggtcg tcatgggact ggcggaccgg attacggtgc
     7321 tcaactacgg ccaggttctg gccgaaggca cgccggcaga aatccaaagc aatccgaagg
     7381 tgctggaggt ctatctcaag acatgaattc ctccgccaat agcctgccgc tgatcgcggt
     7441 ggaggatctg cacacctact acggcaagag ccacatcttg cacggtgtga cgctgcatgt
     7501 cggcccaggg gaggtggtcg ggctgctcgg ccgaaacggc gtcggcaaga gcaccacgct
     7561 gaaaaccatc atgggccttg tgcgtccgac cgaaggcagc gtccggctgg gcggacaacc
     7621 aatcaccgga ctggcggcgc acaagctggc tcgtctcggc atcgggtacg tgccggagga
     7681 tcggcggata tttcggctgc tgacagtgat ggagaacctg cgcacgggcc tcgaccgcca
     7741 gggcgtagcc gacgcgaaaa agcaggaatt gctcgacaag gtgtttactt attttcccgt
     7801 ccttgcagag cggcgcaatc aggctggcgg cacactctcc ggcggcgagc agcagatgct
     7861 ggcgatcgcg cgcgccatga tgctggagcc gaagattatc ctgcttgacg agccgaccga
     7921 aggcctgatg ccgcgaatgg tttcgcagat ccgaaacatc gtcgatgtcc tgcatcggga
     7981 caatgtcgcc attctgctgg tcgagcagaa cgtgccgctg acacttgagg caagcgatcg
     8041 cgtctacatc atggaaaaag gcgcggtgcg ccatcatgct gctgcccgcg atctgaaggt
     8101 ggatgacgcg atcattcacc agtatctggg ggtctaggat ggagcttatc gcgatcctca
     8161 atgccattcc gtgggatcag atcctgattc aaacggtgaa cggcatcgtc accgggatga
     8221 tcctcgcgct gatcgcttcc gggctgaccc tcatttttgg catcatggat gtggtcaatt
     8281 ttgcccatgg cgagctgttc atgctcggcg cctatatcgg cgtggtcgtt ct
//
LOCUS       DATDHO010000334         2144 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_459294, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000334 DATDHO010000000
VERSION     DATDHO010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2144)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2144)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2144
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459294"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..189
                     /locus_tag="VIY07_06405"
     CDS             <1..189
                     /locus_tag="VIY07_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY6381422.1"
                     /translation="GLGIAVLPDYLVEENGGLVQLFGDADTLALDAYFVYPEELKSVA
                     RIQVFRDFLVANAQRWHF"
     gene            complement(493..1104)
                     /locus_tag="VIY07_06410"
     CDS             complement(493..1104)
                     /locus_tag="VIY07_06410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY6381423.1"
                     /translation="MTCGLLRRTAFAAAFVCAVSAPSFGETVAERAAPCLACHGESGQ
                     SETADVPSLGGQPASYLLIQLYLFREQQRVSPARKNDQMIQVMFEMTRGFTDDDLRSF
                     SDLLAKLPPPKPLADNGDAARMQQAAVLITQNRCNSCHGLDLAGRDNIPRIAAQREDY
                     LVKTMREYKSNDRRGYDAAMADVLASVSDQQIADLAYYIARFR"
     gene            complement(1165..>2144)
                     /locus_tag="VIY07_06415"
     CDS             complement(1165..>2144)
                     /locus_tag="VIY07_06415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HEY6381424.1"
                     /translation="NARSLRIGDKGTVFVGTRLANKVTAIVKKDGKTEIKTVAEGLYR
                     PNGLALHNGTLYIAELSQISKIENIENVLDKPPKPTVIYTDLPKDEAHGWKFIAVGPD
                     NKLYVPVGQPGNNVLHSPAHGQIRRINLDGSGAEVIARGVRNTVGFDWNPVNKQLYFS
                     DHGRDWLSEDAPQDELNRITKDGQHFGEPYCHQGNILDPEFGWGRSCSEFTPPIALTG
                     PHSAGVGLRFYTKNMFPAKYKNAIFLARRGSWNRTNKFGADVVAVFLNKDGTVKSIEP
                     FITGFIENNEYIGRPVDVELMADGSMLVSDDFNGAIYRVTYGKPRVAGR"
BASE COUNT          409 a          631 c          631 g          473 t
ORIGIN      
        1 ggactcggca tcgccgtgct gcccgactac ctggtcgaag agaacggcgg cctcgtgcag
       61 ctgttcggcg acgccgacac gctcgccctc gatgcctatt ttgtgtatcc ggaagagctc
      121 aagtcggtgg cccgcatcca ggtattccgc gacttcctgg ttgcgaatgc acagcgttgg
      181 cacttctgac ccgttgccac aattccacaa tcaaagtcgt cgcttgggtt gcgaaagaac
      241 agtggaattt gtggggttcc caacgacttg cgattgcgca tggctgacat gcgacgattg
      301 gcgttgtcgc actgccgcac gcttcgcata cttggggctc gctgttgcgc cgggtatatc
      361 ctcccagaat caccggcctg cagcatgttc ccctctggaa gatattgccg gcccccacgt
      421 cggcaattac tgaaaccggg cccctcgtgg ggtccggttt ttttcccggc caatccaatc
      481 caaacaactc aatcagcgaa agcgcgcgat gtagtaagcg agatcggcaa tctgctggtc
      541 gctcactgac gcaaggacgt ctgccatggc ggcgtcatag ccgcggcgat cgttgctttt
      601 gtattcccgc atcgttttga cgaggtagtc ctcacgctgc gcggcgatgc gcggaatgtt
      661 gtcacggccg gccagatcga gaccgtgaca actgttgcat cgattctgcg tgatcaggac
      721 ggccgcctgc tgcatgcgtg ccgcatctcc attgtcggcg agcggctttg gcgggggcaa
      781 tttggcgagt aggtcggaaa aacttcgcag gtcgtcgtcc gtgaatcccc tggtcatctc
      841 gaacatgacc tggatcatct gatcgttctt ccttgccggg gagacacgtt gctgctcccg
      901 aaaaagatag agctgaatca acaaatatga cgcaggttgt ccaccaagcg acgggacatc
      961 ggctgtttcc gactggccgc tttcgccgtg acaggcaaga cacggcgcgg cacgctcggc
     1021 aaccgtctcg ccgaatgacg gcgcactcac cgcgcaaacg aacgccgccg cgaacgcggt
     1081 gcgacgaaga agaccacacg tcatgtcatg cgatatcaag tgggatcggc cgggggccaa
     1141 aggcccccag ccgcggtagt gacgctaacg gccggccaca cgcggcttgc cgtaagtgac
     1201 gcgatagatc gcaccgttaa agtcgtccga caccagcatc gagccgtccg ccatgagctc
     1261 cacgtcaacc ggccggccga tgtactcgtt gttctcgatg aatccggtga taaacggttc
     1321 gatcgatttc accgttccgt ccttgttcag gaagacggcg acaacgtccg cgccgaactt
     1381 gttcgtgcgg ttccatgatc cgcgtcgcgc aagaaagatt gcgttcttgt atttggccgg
     1441 aaacatattc tttgtgtaga agcgcagccc cacgccggcc gagtgcgggc cggttaacgc
     1501 gatcgggggc gtgaactcgc tgcagctgcg gccccaaccg aattccgggt caagtatgtt
     1561 gccctggtgg caatagggtt cgccgaaatg ttgaccatcc tttgttatgc ggttgagttc
     1621 atcctgtggt gcatcttccg aaagccagtc tcggccatgg tccgagaaat agagctgctt
     1681 gttcaccgga ttccagtcga agccgaccgt attgcgaacg ccccttgcaa tgacttccgc
     1741 tcccgatccg tccagattga tgcgccggat ttgcccatgc gcgggactgt gcagcacgtt
     1801 attgccgggc tgcccaacgg gtacgtagag cttgttgtcg gggccgacgg cgatgaactt
     1861 ccagccatgc gcctcatctt tcggcaaatc ggtatagatg actgtcggtt tgggcggttt
     1921 gtcgagcacg ttctcgatat tctcgatctt ggagatctgc gagagctcgg cgatgtagag
     1981 cgtaccgttg tgtagggcga gaccattcgg gcgataaagg ccttccgcca ctgtcttgat
     2041 ctcggtcttg ccgtccttct tgacgattgc ggtgaccttg ttggccaggc gggtgccgac
     2101 aaagaccgtg cccttgtcgc cgatacgcaa cgaacgcgca ttcg
//
LOCUS       DATDHO010000335         2984 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_263864, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000335 DATDHO010000000
VERSION     DATDHO010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_263864"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            207..1547
                     /locus_tag="VIY07_06420"
     CDS             207..1547
                     /locus_tag="VIY07_06420"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: protein motif:HMM:NF006696.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEY6381425.1"
                     /translation="MASPESPLTTDLYELNMVQAYLDRGEDKEAVFEFFVRRLPARRN
                     FLVAAGLEDALVYLETLRFPAHEIDWLKNTGRFRSNLLDYLAGLRFTGDVHAIPEGTI
                     CFPHEPLIRITAPLPIAQLVETRLINILHFQTMIASKAARMVLAAPGKILSDFGLRTA
                     HGAEAGLFSARASYIAGFFGAANVLAGERYGIPIVGTMAHSFVQVHDDEMTAFENFAR
                     ARPEGVILLIDTYDTEAGARKVVQLAPKLKAEGITIRGVRIDSGDLAAMARKVRGILD
                     AGGLNDVIILVSGGINEDVLQTMTRTRAPIDGYGIGVHLDASIDAPSLDCAYKLQEYA
                     GRPRRKLSEGKVTWPGRKQVWRNFGGDGRMSGDIISLENDSQKGDLLVVPVMRAGKRI
                     APAPTLSQIREHAARELARLPERLRRLEESDDYPVRLSEKLKTLAAEIAAKAAR"
     gene            complement(1621..2811)
                     /locus_tag="VIY07_06425"
     CDS             complement(1621..2811)
                     /locus_tag="VIY07_06425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008874195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HEY6381426.1"
                     /translation="MNIKAQPSSGLAIPFDHHRLDRLMEEAGIDVVIATSKHNVQYLL
                     GGHRADFFDYMDATGVTRYLPVFVYPKGTPEKAAYIGHRLEKFQREVKPMWTPETQTN
                     TWGSVDALQKAVEYMRKIGLKPKRIAAEFGFLPYDASQVLRAAFPDAEWVDALYVLER
                     QRVKKSAEELKLLKFASEAVIDSMKMVIAGSKPGVTKADVVEALRCEETNRGLTFEYC
                     LITCGTGMNRAPSDQRWEKGDIMSIDSGGNYEGYIGDVCRMAIQGEPDAELEDLLGEI
                     ETIQRAAMKPIRAGVIGGEIYAAAKPLVQKSKHHNHMEFLAHGMGMVSHEAPRLTDRG
                     PVPYPAEYADRPLEAGMVVSVETTLMHPARGFIKLEDTVVVHDAGHEVYGEGARGWNR
                     AGVR"
BASE COUNT          596 a          925 c          860 g          603 t
ORIGIN      
        1 acggctgtca ccaaaagacc gacagctgcc gcgctcagaa agagagtccg caataccttc
       61 atagtgtcct cctcgcacaa aaattcgttg ggtcaaagcc tatcaaccaa tgggtaatta
      121 cgtaaagcaa cttgccgatg aatggccaag ggctgcgcag aataagagag ttggattctc
      181 tcacaaattg gcggtaactc tgcggcatgg cgtcccccga aagtccgctc accaccgacc
      241 tctacgagct caacatggtc caggcctatc tggatcgcgg cgaggacaag gaagccgtgt
      301 tcgaattctt cgtgcggcgg ctgccggcgc gacgcaattt tctggttgca gccggtctcg
      361 aggatgcgct cgtctatctc gagacactgc gctttcccgc ccacgagatt gactggctca
      421 aaaacaccgg tcgctttcga agcaatctcc tcgactatct cgccggactg cgtttcaccg
      481 gtgacgtcca cgccatcccg gaaggcacaa tatgctttcc gcacgaacct ctcatccgga
      541 tcaccgcgcc gctgcccata gcacaactgg tcgagacccg gctgatcaac attttgcatt
      601 tccagaccat gatcgcctcc aaggcggcac gcatggtgct cgcagcgccg ggaaaaattc
      661 tgtcggactt tggactgcgc acggcgcacg gcgctgaggc ggggctcttt tcggcacgcg
      721 cgagctacat cgccgggttc ttcggcgccg ccaatgtgct tgccggtgag cgttacggaa
      781 ttccgattgt cggcaccatg gcgcactctt ttgtgcaggt gcatgacgac gagatgaccg
      841 ctttcgagaa tttcgcgcgc gcgcgcccgg agggcgtcat tcttctcatc gatacctacg
      901 acacggaagc gggcgcgcgc aaagtcgtcc agcttgcgcc gaaactgaaa gccgagggca
      961 tcacgatccg cggtgtgcgc atcgacagcg gtgatctggc cgcgatggcc agaaaagttc
     1021 gcggaatcct cgatgccggg ggattgaacg atgtcattat tctcgtgagc ggcggcatta
     1081 acgaagacgt gctgcaaacg atgacgagga ccagagcgcc gatcgatggc tacggaatcg
     1141 gcgtccacct cgatgcctcg atcgacgcgc catcgctcga ttgcgcctac aagcttcagg
     1201 agtacgccgg cagaccgaga cgaaagttgt ccgaaggcaa ggtcacctgg cccggacgca
     1261 aacaggtctg gcgcaacttc ggcggcgacg ggcgaatgtc cggggacatt atctccctgg
     1321 agaatgactc acaaaaaggc gatctcctgg tcgtgccggt gatgcgcgcg gggaaacgca
     1381 ttgcgccagc gccgacgctc tcccaaatcc gcgagcatgc agcgcgtgaa ctcgcgcgtc
     1441 tgcccgagcg actccggcgg cttgaagaga gcgacgatta tcctgttcgg ctttctgaga
     1501 agctgaaaac gctggcggcg gaaatagctg ccaaggcagc gcgataattc tccgttcatt
     1561 cccgcgcaag cgggaatgca agaacagctg cgtgctttgc agtcttgcgc tgcgtcgccg
     1621 ctatcgcacg cctgccctgt tccagcctcg agctccttcg ccgtagacct catggccggc
     1681 atcgtggacg accacggtgt cctcgagctt gatgaagcct cgtgccggat gcatgagcgt
     1741 cgtttcgacc gacaccacca ttcccgcttc aagaggccga tctgcatatt cggccggata
     1801 aggcaccggc ccgcggtcgg tcagccgcgg cgcctcgtgg ctgaccattc ccatgccgtg
     1861 ggcgagaaat tccatgtggt tgtgatgctt cgatttctgc accaggggct tggccgcggc
     1921 atagatctcg ccgccaatga cgccggcgcg gatcggcttc attgcggcac gctggatggt
     1981 ttcgatctcg ccgagcagat cttccagttc ggcgtccggc tcgccctgga tcgccatgcg
     2041 gcacacgtcg ccgatatagc cctcatagtt gccgccggaa tcgatcgaca tgatgtcgcc
     2101 tttctcccac ctttgatcgg agggcgcgcg gttcatgcca gtgccgcagg tgatcaggca
     2161 gtattcaaag gtcagtccgc ggtttgtttc ctcgcatcgc agcgcctcaa ccacatcagc
     2221 cttcgtgacg ccgggcttgc tgccggcaat caccatcttc atggaatcga tcacggcctc
     2281 cgaggcgaat ttcaataatt tcagctcttc ggccgacttc ttcacgcgct gccgctcgag
     2341 cacgtacaac gcgtccaccc actcagcatc cggaaaagcg gcacgcagca cctgcgatgc
     2401 gtcatagggc agaaagccaa actcggcagc aatacgcttc ggcttgaggc cgatcttgcg
     2461 catatactcg accgccttct gcagggcatc gacagagccc caggtattgg tctgcgtttc
     2521 cggcgtccac atcggcttca cctcgcgctg gaatttctcc aggcggtggc cgatgtaggc
     2581 ggccttctcc ggcgtgccct tcggatagac gaaaaccggc agatagcggg tgacgccggt
     2641 tgcgtccatg taatcgaaga aatccgcgcg gtggccgccg agcagatact gcacattgtg
     2701 cttcgacgtc gcgatcacga cgtcaattcc ggcttcttcc atcagccggt cgaggcggtg
     2761 atggtcgaac ggaattgcaa gaccactcga cggctgagcc ttgatattca tgagatccgg
     2821 tctcctgctg gtccgttcat tcccgcgcaa gcggcggatt gctaattcac gtacgagact
     2881 atgaccagag gtccgtgctc gcaaggtacc atccatcggt tcgtccccgc gaaagcgggg
     2941 acccagaacg ttgtttaatt ccggattccc gcttgcgcgg gaaa
//
LOCUS       DATDHO010000336         3532 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_412244, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000336 DATDHO010000000
VERSION     DATDHO010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3532
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_412244"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(36..365)
                     /locus_tag="VIY07_06430"
     CDS             complement(36..365)
                     /locus_tag="VIY07_06430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381427.1"
                     /translation="MKRHGGSGKPGKGRRTEPARKALTGRASVADLQKQLIRRTRERD
                     EALEQQGATADVLKVISRSTFDLQAVLDTLTESAARLCEADQAFLFRRAGDNYVWAAS
                     MAFRKSL"
     gene            712..2325
                     /locus_tag="VIY07_06435"
     CDS             712..2325
                     /locus_tag="VIY07_06435"
                     /inference="COORDINATES: protein motif:HMM:NF023273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6381428.1"
                     /translation="MNLQLRHSLKWQMIGPIPFMVIAAIAAIWFMVPRKIAESAADQA
                     VIAGRSIATQFKTLREYYTENVVDKVLSDGTFRASSDHRGDAKAIPLPATMILDLSAM
                     LAKQNTAISLYSKFPFPNRENRRLDAFQQGAWDFLVRNPEETYSRREMLDGRHVVRVA
                     VADTMVVEACVNCHNTIAESPKKDWKLGDVRGVLEVTSVIDAELANGAALSRFIIVGA
                     ALIGLGLLVMALFVAGSVTRPIENLIGAMQKVAAGNFETALPGLERKDEIGRLAGGFN
                     HMVSELGAAREREVVDRARTARMQAELTRVARLTTMGRLAASMAHEINQPLAAIVANG
                     NAGLRWLARTPPNFDETREALDQIVKDGHRASDTIEGIRAIFRKGDEQRAPLDVNELI
                     GEVLRLTHGEIQNGRVSVQTQLSNDLPNVMGNRVQLQLVFRNLIVNAVEAMSSVTDRA
                     RMLHVISAITPSGVRIAVEDSGTGIDRESIDRIFDTFFTTKSHGMGMGLSICRSIIEA
                     HGGKLSASPSHPHGSIFEIDLPAAKMDDQ"
     gene            complement(2445..3511)
                     /locus_tag="VIY07_06440"
                     /pseudo
     CDS             complement(2445..3511)
                     /locus_tag="VIY07_06440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314451.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
BASE COUNT          704 a         1062 c         1076 g          690 t
ORIGIN      
        1 atcactggct ctttgtggtc gattctttct aaattctaca aactcttgcg aaaagccatg
       61 cttgcagccc agacataatt gtcgcctgcg cgccggaaca agaaggcttg atccgcctca
      121 cacaggcgag cggccgactc agtcagcgta tccagcaccg cctgcaagtc gaatgtcgag
      181 cgactgatga ccttcaggac gtcggcggtc gcgccctgtt gctctagcgc ctcgtcgcgc
      241 tcgcgggttc gccggatgag ttgtttttgc aggtcggcga cggatgcgcg tccagtcaac
      301 gccttgcgag ccggctcggt gcgccgccct ttccccggct ttccgcttcc accgtgtctc
      361 ttcatccgct tcacgcccct gcacctaagt tcatcctaca ggtctaattt gggattttgg
      421 aagagcattg gtcgggtgcg gtcatgtgtc aggggcgcgt gcgtgccaat ttggccctaa
      481 tgacgctttt gtaaaacgag ttttgagttc gccatttgaa tcccccctaa agcgaacatt
      541 cgcgctgcac aaattaatgt ccgctaaggg ccaagagcgg acatcgccaa tctatcgcta
      601 gtgctcgaca agggcacagt cctgcggaac gtcatttcga cgccgccaac acttccgtaa
      661 tatcctcctc aggccattcc tggatcgagg acacaagctc gagaggcgat catgaatttg
      721 caactgcggc atagccttaa gtggcagatg atcggaccca ttccattcat ggtgatcgcc
      781 gcaattgctg cgatctggtt catggttccg cgcaagattg ccgagagcgc agccgatcag
      841 gcagtgattg ctggccgcag catcgcaact caattcaaaa ctcttcgcga gtactacact
      901 gaaaacgtcg tcgacaaggt cctcagcgac ggaacgttta gggcttcgtc cgatcacaga
      961 ggcgatgcca aggcgatccc tctaccggcg acgatgattc tcgatttaag cgcaatgtta
     1021 gcgaagcaga atacggcaat cagcctctac agcaagtttc catttcccaa ccgagagaac
     1081 cggcggctcg atgcattcca acagggggcc tgggattttc tagtcaggaa tccagaggaa
     1141 acgtattccc gccgagagat gcttgacgga aggcacgttg tgcgtgtggc tgtggcagat
     1201 accatggtgg tggaggcttg cgtcaactgt cacaacacaa ttgcagagtc gccaaagaag
     1261 gattggaagc tcggcgacgt gcgtggtgtt ctggaagtca cctcggtcat cgatgcggag
     1321 cttgccaacg gcgcggcgtt gagccgtttc atcattgtcg gtgccgctct gattgggctg
     1381 ggattgctgg tcatggccct tttcgtggcg ggcagtgtga cgcggccaat tgaaaattta
     1441 atcggcgcga tgcaaaaggt cgcggccggc aattttgaaa cagctctccc cggcctcgag
     1501 cgcaaagatg agatcggtcg gctggcaggc ggcttcaatc acatggtctc tgaactcggc
     1561 gctgcgcgag agcgtgaggt cgtggatcga gcccggaccg caaggatgca ggctgagctc
     1621 acgcgcgtcg cgcggttgac cacaatggga cgattggcgg cctcaatggc tcacgagatc
     1681 aaccagccct tagccgcgat cgtggcgaat ggcaacgcgg gcttgcgctg gcttgcgcgt
     1741 acgccgccga atttcgacga aaccagggaa gctttggatc aaatcgtcaa ggacggacat
     1801 cgcgccagcg acacgatcga gggtattcgt gcgattttca ggaagggtga cgagcaacgg
     1861 gcccctctcg acgtcaacga acttattgga gaggtcctac ggctgacgca cggcgagatt
     1921 cagaatggac gagtctcggt tcaaacccaa ctgagcaacg accttcccaa cgtgatgggc
     1981 aaccgagtcc aattgcaact ggtcttccga aacttgatcg tgaatgccgt cgaggcgatg
     2041 agttccgtga ccgaccgggc acgaatgctg cacgtcatct ccgcgatcac gccctccggc
     2101 gtgcggatag cggtagaaga ttccggaacg ggcatcgacc gggagagcat agaccgtatc
     2161 tttgatacgt tcttcaccac caagtctcat ggaatgggga tggggctttc gatttgtcgg
     2221 tcgatcatcg aagcccatgg tgggaagctg tcagcgtcgc cctcacatcc acacggatcg
     2281 atctttgaaa tcgacttgcc tgcggccaaa atggacgatc agtgagaaga gctggccccc
     2341 tccgtcgaag cgcgcgagca gccgcggatc ggcaaccgtg acgatcaccg tgcgttctgc
     2401 tttgcgggcc ggggcacgcg cgcaaatttg gtcgcaatga cgcttcagag ccctcgcacg
     2461 cgtggttgtc cccgcccggt gcgggcggtc agctcggtca cggcccacac caatgcgtca
     2521 agccggtcgg gcgacgcgcc ggaggaaagg ccggccatgc caaagtcgca catttcatct
     2581 tcaagcgcga cgagtggcgg atcgacgtgt ttgaccctgc cctgctggta cagcatggcg
     2641 atcggctcgg cgcgcagcca ttttcccctc gtcgcgcgga cggtgcgcag tggaatggag
     2701 cgatccacct gctcaagcac cgcgcgcacc atgtcgccgc cctggttcac ctcggcgact
     2761 agcgcatccg cattgagacg cctgaacatc cccaccgcct tcatggccca gccgcccggt
     2821 gcaaggccct gcacgctcgc atcttccagc acatagatgc gctcatcctc ggcaatgccc
     2881 gccgccacga cgccgcaggc gtccgcgccc ggcgcgcaga gcccggcgga tcgactccga
     2941 tgacgaagcg cgacaacgga ggggcgcgcg aaacgcgcga cgcctcgatg atcgcgcggg
     3001 tccataatgc atcggcgcgg tcctcgacga tttcaccgtc gatctcctga cgcccgagcc
     3061 gcgtcccggc atagcgcgcg aggacttcgg cgagaaaggc gggtgacagg tgcgcggcgt
     3121 tcgcatgggt cgcggcgcgc gtcaccgcgg tgcgaggatc ggcgaggagc cgcttgatca
     3181 gcgggatcgg acgcggcgtg gtggtgacga gctgacgcgg cctctgtccg agccgcagcc
     3241 cgaactgcag catgtcgaag gtggcatcga cgtagtgcca tttcgcgagt tcgtcgcacc
     3301 aggcagcatc gaattgcggg ccgcggagct gctcggggtc ctccgccgaa aatgcaaaag
     3361 ccaccgcgcc gttcggccat tcgagccgtc gtcgtgatgc ggcccatcgc ggacgctcgc
     3421 tgggcggtga aatgcgcaga agcccggcag ggccttcgat catgacctcg cgcacgtcgt
     3481 gctcggtttc gccaaccaat gcgatctgca gcgatcgttc gctggcatag gg
//
LOCUS       DATDHO010000337         2543 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_459428, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000337 DATDHO010000000
VERSION     DATDHO010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2543)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2543)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2543
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459428"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..816)
                     /locus_tag="VIY07_06445"
     CDS             complement(<1..816)
                     /locus_tag="VIY07_06445"
                     /inference="COORDINATES: protein motif:HMM:NF018178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 16 glycoside hydrolase"
                     /protein_id="HEY6381429.1"
                     /translation="MAKTSRRTTQLAVSLSILGLVANYAVPKAAGQEAGWITLFDGKS
                     LDGWDQLGESNWRVEDGAIVVDKMAGKDAGYLVSKNSYKNFIVRVEFFPSDNANSGIY
                     FRCLDPKKITDRTCYEANIFDQRTDPSYGTGAITRYVEVNPMPKAGGKWNTYEVTANG
                     RDVTVVLNGETTAKLRNGMFDEGPIVLQHGAGFDQVPQGGSQTAVKRGAADWRDGMDV
                     AIVGGGICGLSLALNLKERGIACRVYERAPEIKELGVGITLLPHAMREFSALGL"
     gene            939..1322
                     /locus_tag="VIY07_06450"
     CDS             939..1322
                     /locus_tag="VIY07_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010974483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY6381430.1"
                     /translation="MDKALYDRGMAMRRKVLGDEYVDRAVANTDDFNRQFQELLTTYC
                     WGAVWGDDALKPRERSILNLGMIACLGRMHEFEAHFRGALRNGLTPNELSAILRQVAV
                     YCGFPAAVDCHRVAKQVLAAEAKKS"
     gene            1438..2514
                     /locus_tag="VIY07_06455"
     CDS             1438..2514
                     /locus_tag="VIY07_06455"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6381431.1"
                     /translation="MIRFSGALLLALPAAAGFVAGPAMAQYTRPPPSIYYEERLPPVV
                     GGYDDEDLLPPPRRGVRPGQRGRVLPYPDDEPELPPPTGLFGSPDQRPGAYNRQVNPQ
                     QLQQAPQGAPGRATNEPDAFRPPGAIGAAPQGTPPSVTAALPPDYQPETGKPKELPAN
                     LKKQLVDFSTKEPTGTIIIDTANTYLYLALGGGKALRYGIGVGRDGFTWAGSERVSKM
                     SEWPDWHPPSEMIDRQPYLPRFMAGGPGNPLGARALYLGKTLYRIHGTNQPSTIGTFV
                     SSGCIRLLNEDIEDLYSRVQVGTRVVVLPGKPPEHVANTGAQPAANGSAPAGAPANIT
                     APSTVPAARSNSSAITSSPLPPIR"
BASE COUNT          466 a          790 c          764 g          523 t
ORIGIN      
        1 cagtcctagc gcgctgaact cccgcatggc gtgcgggagc agcgtgatgc cgaccccgag
       61 ctccttgatc tcgggggcgc gttcatacac gcggcaggcg atgccgcgtt ctttcagatt
      121 gagggcgagc gatagcccgc agatgccgcc gccgacgatc gctacgtcca ttccgtcacg
      181 ccaatccgct gctccccgct ttacagcggt ttgacttcca ccttgcggaa cttgatcgaa
      241 cccggcgccg tgctgcagca caattggacc ttcgtcgaac atgccattgc gcagctttgc
      301 cgtcgtttcg ccgttgagca cgaccgtaac gtcgcggcca ttggcagtga cttcataggt
      361 attccattta ccgccggcct ttggcatcgg attgacctcg acgtaacggg tgatcgcccc
      421 ggtgccatag cttggatcgg tacgctggtc gaaaatattt gcctcgtaac aggtccggtc
      481 ggtgatcttt ttcggatcaa ggcagcggaa ataaatgccg ctattggcat tgtcactggg
      541 gaaaaattcg acgcgcacga tgaagttctt gtacgagttc ttgctgacga ggtaaccggc
      601 gtccttgccg gccatcttgt cgacgacgat ggcgccatcc tcgacccgcc agttcgattc
      661 gccgagctga tcccacccgt caaggctttt gccgtcgaac agcgtaatcc agccggcctc
      721 ctggccggca gctttcggta ccgcgtagtt tgcgaccagg cccagaatgc tgagcgagac
      781 tgcaagttgg gtcgtgcgcc tcgatgtctt cgccatgtcc ttcctcccga cggttttgaa
      841 ttgttgttca attcgccgca agaatggacg agatcgctcg aactctgtca acatggcttg
      901 atcgcgaaac aactgacgcc atttggggag gtttgatcat ggacaaggca ctgtacgatc
      961 gtggaatggc catgcgccgc aaggtgctgg gcgacgagta tgtggaccgg gccgtcgcta
     1021 ataccgatga cttcaatcgc cagttccagg aattgctgac tacgtattgc tggggcgccg
     1081 tatggggcga cgatgccctg aagccgcgcg agcgcagcat cctgaacctc ggcatgatcg
     1141 cctgtctcgg tcggatgcat gagttcgagg cgcattttcg gggcgcgctg cggaacgggc
     1201 ttacgccgaa cgagctgtcc gcaatcttgc ggcaggtagc cgtttattgc gggttcccgg
     1261 ccgcggtgga ctgtcatcgc gtggccaagc aggttttggc ggctgaagcc aagaaatctt
     1321 gacggcgcaa agcaaagggt cgttaacgag atggccctaa tctggtcttg aatgtgcctt
     1381 catcccgggg caatcaggga tacggtttgg cggctgcttc gctgccaagg gtggacgatg
     1441 atccgatttt ccggtgcttt actgctggcc ttgccagctg ccgcgggctt tgtcgctggg
     1501 ccagcgatgg cgcagtacac ccggccgcct ccaagcatct attacgaaga gcgtttgccg
     1561 ccggtggttg gcggctacga cgatgaagat ctgcttcccc cgccacggcg tggcgtgcgt
     1621 cccggccaac gtggccgtgt ccttccctat ccggacgacg aaccggagct gcctccgcca
     1681 acaggtcttt tcggctcgcc cgatcagagg cccggcgcct ataaccgcca ggtgaatccg
     1741 cagcagctgc agcaggcgcc gcagggtgcg ccaggcaggg caaccaacga acccgacgct
     1801 tttcggccgc cgggtgccat cggcgcggcg ccgcagggaa cgccgccttc agtcaccgcg
     1861 gcgcttcccc ctgactatca gccggagaca ggcaaaccga aagagctgcc tgctaacctc
     1921 aaaaaacaat tggtcgattt ttccaccaag gaaccgaccg gcacgatcat catcgatacc
     1981 gcaaacacct atctctatct ggcgcttggt ggtgggaagg cattgcgtta cggcatcggt
     2041 gtaggccgcg acggattcac ctgggcgggc agcgagcgcg tcagcaagat gtcggaatgg
     2101 ccggactggc atccgccgtc tgagatgatc gatcgtcaac cgtatttgcc gcgcttcatg
     2161 gcaggcgggc cgggcaatcc gctcggcgct cgcgcgctct atctcggcaa gacgctatat
     2221 cgcattcatg gcacgaacca gccttcgacc atcggcacgt tcgtgtcgtc cgggtgcatc
     2281 cgattgctca acgaggatat cgaagatctc tacagccgag tgcaggtagg gacccgcgtc
     2341 gtagtgctgc ccggcaagcc gcccgagcat gtcgccaaca cgggggcgca gccggccgca
     2401 aacggttcgg cgcccgccgg tgctccggcc aatatcaccg cgccgagtac ggttcctgca
     2461 gcgcgcagca actccagcgc aatcacgtcc tcgccgttgc cgcccatccg ttagatcgcg
     2521 ctgcatcctt tccccgttag tcc
//
LOCUS       DATDHO010000338         2681 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_16203, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000338 DATDHO010000000
VERSION     DATDHO010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2681
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16203"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            546..776
                     /locus_tag="VIY07_06460"
     CDS             546..776
                     /locus_tag="VIY07_06460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381432.1"
                     /translation="MKAAWQAMKAAQLEHAEFRRALQNKIGAELRVMYEHVVNQRPST
                     RLLDLLSRLDEGKKPDLGTGSELKEGTRRPHG"
     gene            complement(1269..1634)
                     /locus_tag="VIY07_06465"
     CDS             complement(1269..1634)
                     /locus_tag="VIY07_06465"
                     /inference="COORDINATES: protein motif:HMM:NF018527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HEY6381433.1"
                     /translation="MTKFLVNIVASVILSATFAANAQTPSQQEFAPAARVNLTLEQRH
                     IIRELIKDLKIEPTKTSTQPSVGDPLPQDVTLRSMPNEIGRKVPQIRAHRFVITPDQI
                     VIVDPKDNRVAELIDLEAN"
     gene            1970..2158
                     /locus_tag="VIY07_06470"
     CDS             1970..2158
                     /locus_tag="VIY07_06470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381434.1"
                     /translation="MTDSQGSNGTLGPIIGTLIAVGLAVILLVGDEYLGKKTVSSDAD
                     LPPVATGPKVPDAGKISK"
     gene            complement(2457..>2681)
                     /locus_tag="VIY07_06475"
     CDS             complement(2457..>2681)
                     /locus_tag="VIY07_06475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381435.1"
                     /translation="SEVIEAMSVAFEDACRTLGLAQRDDRLRDIVAHKVIELAEAGER
                     DPLRLRDHVLASFGKEPQNGGAPREAPFGC"
BASE COUNT          571 a          759 c          820 g          531 t
ORIGIN      
        1 gctctcccat cggggagcgc cgctgccccg acaaccggga acaagatgcg atggttccgt
       61 cgggcagcgg tccgggtcat gtgggtcagg aaaaaggccc cgcagggcgg cggggccgag
      121 gtgccaaagc ggcggcgagg ggtgcgtaca atctcgccgc cgatatcaga ctaccacgaa
      181 ccgcagcacc ccgcacgcaa ggctccgcct tcccgacgca ccgccggcgc tcgctgcgcg
      241 ggttccaacg gatgaacttt tgggacggcc gccgtggttc tgtcacggct ccctagacct
      301 tccctagacc acaataccaa gtcatccgaa aggcgcggct gggcagcccc tagcgggaac
      361 cagcaccatt ccctcgcgtt tcttttctta agagtgagtg tcctttgacg gagggccaaa
      421 tgaatcacta tgccggggtg cggaaagaag cgcacgagac catgtacttg tgggctgcgg
      481 cgggtgtgag cattgctgtg atcttcgtcg ttgttgctct gtgatatcag acatttaggg
      541 aggcaatgaa ggctgcttgg caggcaatga aggctgcaca gttggaacac gccgagtttc
      601 gccgagcctt acaaaacaag atcggcgcgg aactccgtgt gatgtatgag cacgtggtca
      661 atcaaagacc ttctacaagg ctgctcgatc ttttgagccg tcttgatgaa ggaaaaaagc
      721 cagacctcgg aactggatcg gaattgaaag agggcacccg gaggccgcac ggttgagatt
      781 tgggaagaac cgcaaagtgc cagttggctc caagaaaaag acaatattcc gggggaggtt
      841 ccaagagacg ttgtttccca gcaacctcga tcgtggtgag gggaacatgc ttggaattgg
      901 caacttgatc ccgagaccct cgtaagtctg gaaaccgcct ttgatgaagc gtggataacg
      961 ctcaagacta ccggcagcgc taacatcagg cccgacgaac tcgcgcgacg catcttccat
     1021 ctcgcgatgg aaggagagcg tgaccccgtg cgactgcacg acggggcgct ttcggatctg
     1081 atcccggcag cgaaatggcg cgaagcaagc taagcagaac caacgatgtt tgccagcggc
     1141 ctccgtcccc tgctatcggc agtagctgct ctgcggctgg tttggcgcag atcggagcat
     1201 ggaatgaccc ccgcggcact aacctccttt gcgatttgga acggcttggc gtgccggatt
     1261 gatctcgatc agttcgcttc gaggtcgatc agttcggcga ccctgttgtc cttcgggtct
     1321 acaatcacaa tctggtcagg agtgatcaca aatcgatgcg ccctgatttg cggcaccttc
     1381 cggccgatct cgttcggcat ggaccgcaag gtgacgtcct gcggaagcgg atctcctacg
     1441 gacggctgcg tggacgtctt ggtcggttcg attttcaaat ccttgatcag ttcccggata
     1501 atgtgccttt gctccagcgt gagattgaca cgggccgccg gcgcgaactc ctgctgcgaa
     1561 ggcgtttgag cgttcgccgc gaaagtggct gacaatatca ccgatgcaac gatgtttacc
     1621 aggaacttgg tcatgcggcc gctcccgcgt agcgccgagc tgaaccggga tttcccgaat
     1681 agacctcgaa tggaagtgaa tgatagcgat ttcctggatt gcttggaagg cggattcgag
     1741 gtgtcggggc tcccggtatt cgggacgcac gacgtggcgg agcatggcga acatcgtctt
     1801 gcaacgcggg caccgtcaac acatgacctt acgggatcaa atcttttttc gaattgttgt
     1861 tggaactacg cgaagccgct cacgacaagt ccacccatcg tgcgcggcgc agggaacctc
     1921 gatccgatgc cggcgttggc ccgataggtc cggactagcg gaggttagta tgactgacag
     1981 ccagggttcg aacggaacgc tcggccccat catcggcacg ctgatcgcgg ttggcctcgc
     2041 cgtaatcctg ctcgtgggcg acgaatatct gggcaagaag acggtcagca gtgacgccga
     2101 tcttccgccg gtcgcaacgg ggccaaaggt tcccgacgcc ggaaaaattt ccaaatgatg
     2161 agtgtgacca ccgtcacagg tgggggcgag tttttgcact atgcgaaggg agagcgggcg
     2221 aagggcgccc gccattgcca tatcaaccgg gcaggctcgc ttatgctgaa gatgccatca
     2281 caaaccgaac caccaatttg taggcattgt ggaactcaga tgcgggaagt agcacgcata
     2341 gcgcccttcg cagatcagcc tggattgcgt gcttacgagt gtccaaggtg tgggtgcgta
     2401 tcgagcgtgc ttgatgtgcc cgatccaccg cgcggaggtt cgcgccacat cgcgcgttaa
     2461 caaccaaagg gcgcttcgcg cggcgctccg ccgttctgag gctccttgcc gaatgacgcc
     2521 agcacatgat cgcgtaagcg aagcggatcg cgttcgccgg cctcggcaag ctcgataacc
     2581 ttgtgtgcta ctatgtctcg cagccggtcg tcgcgttggg ccagcccaag agtacggcaa
     2641 gcatcctcga aagccacaga catggcctcg atcacctccg a
//
LOCUS       DATDHO010000339         4382 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_115571, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000339 DATDHO010000000
VERSION     DATDHO010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4382)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4382)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4382
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115571"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..314
                     /locus_tag="VIY07_06480"
     CDS             <1..314
                     /locus_tag="VIY07_06480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381436.1"
                     /translation="RWTIQGPLDVRVKWKVKMTEEDTNELIRYETVTSPGLRTYWEIH
                     FAQGSDAGQTELREVMKTPLGRVGRAALALIGKFPSEEVSANLHRLKEVMETGRVGVK
                     Q"
     gene            329..733
                     /locus_tag="VIY07_06485"
     CDS             329..733
                     /locus_tag="VIY07_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6381437.1"
                     /translation="MGSVGLALTAIALSVSPGLTQNVEQVKPVFEHVIPNVEGKSMVA
                     VVVTYPPGGKSLAHHHARSAFIYAYVLSGAIRSQVDDQPAKVYQVGEGFTEMPGSYHR
                     ISENASNRDPASLLAVFVVDSKDKPLTIPDKK"
     gene            923..1534
                     /gene="wrbA"
                     /locus_tag="VIY07_06490"
     CDS             923..1534
                     /gene="wrbA"
                     /locus_tag="VIY07_06490"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: protein motif:HMM:NF002999.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003955 - NAD(P)H dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HEY6381438.1"
                     /translation="MKVLIVYYSTHGNVYRMATLVAEGVKEIPGAQPVVRTVPELIPK
                     SVIDSREDMRAGRAMQQDVPLVTADDFREAGAIVFGTPTRFGNVSAQLKNQIDQLTSL
                     WLKGELEGKPAGVFVSTGSSHGGQETTALTLMAPLLHLGMILVGVPYSIQELFTTQGG
                     GSPYGPGHVAGKDNKRPIDEQEAAICRALGRRLAAIGLRLRQP"
     gene            complement(1575..1772)
                     /locus_tag="VIY07_06495"
     CDS             complement(1575..1772)
                     /locus_tag="VIY07_06495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381439.1"
                     /translation="MTMTFCTVIIHALPLIPILHFLRYELRLGRAGVLFWRDVGIVAG
                     VTVVALAAHLIAVAAWAIVHT"
     gene            complement(2087..2695)
                     /locus_tag="VIY07_06500"
     CDS             complement(2087..2695)
                     /locus_tag="VIY07_06500"
                     /inference="COORDINATES: protein motif:HMM:NF015823.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-type transport auxiliary lipoprotein family
                     protein"
                     /protein_id="HEY6381440.1"
                     /translation="MRLIRLAFVVCACVVIAGCSIGAPIPQATTYVIELPATTPATAR
                     HPETLRMGNVRVAAPFAGDALVYRMDEVRYIADPYNAFIAEPARMLGSRMAEWLDRAG
                     PFQSVAQPDSVRAASYILEATVSDLYGDFRPGHAPAAVVTVQFALIDLTSARSKVVLE
                     RTIGRRVAIQQATPDALVRGYGEALAEILVQLVPNLGDERVK"
     gene            complement(2692..3750)
                     /locus_tag="VIY07_06505"
     CDS             complement(2692..3750)
                     /locus_tag="VIY07_06505"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEY6381441.1"
                     /translation="MDEKQNYRRLGLFVLVTLALLAAILFVLGGRSLFQPTFTFETYF
                     NESVAGLEIGAPVNFRGVPLGQVTEIVTASALYQRDVPLVKRTSYIVVRAKISGSSAA
                     QTAQMREDTQKNVELGLRVLTQLAGITGQQYLAFDYFDPKTHPPLEFDWTPKYPYVPS
                     EPSLTGTIIANAQRFIASLNDADVKDLGQNLNKLVVNLNAKLDKVPVAEISTELEGAL
                     KSARRTIDRVDRVIAGAPIDETVQNLASASARLDKLLANPGLHQTVDNVAALTERLRK
                     IGESGELDRVVRNIDEAVQRLDAMLGDNQYDVRTILQDLRVTANNLRTLSETVKRYPA
                     GALIGGPPEKVVLPKDSK"
     gene            complement(3753..>4382)
                     /locus_tag="VIY07_06510"
     CDS             complement(3753..>4382)
                     /locus_tag="VIY07_06510"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6381442.1"
                     /translation="KNIIGLYRPMDGDILIDGTSIVRARVPDKARLQRKLGVMYQSGA
                     LFGSLTVLENVRFPLDQFTDLGLGEKNLTARMLLRQVEMGYAEGFMPGALSGGMLKRA
                     GIARAMALGSDILTLDEPSAGLDPITAANLDRTILSLRENLGFTFVVVTHELQSIFAI
                     ADRAIMLDPVSRSIIAEGKPSELRDHTDDPRVRQFFNRQSDAAMHKAIS"
BASE COUNT          948 a         1262 c         1313 g          859 t
ORIGIN      
        1 atcgatggac gatacaaggc ccgctggacg ttcgagtgaa gtggaaggtg aaaatgactg
       61 aggaggacac aaacgagttg attcgttacg aaaccgtcac ctcacctggg ctgagaacct
      121 actgggaaat ccatttcgcc cagggatctg atgcgggtca gacggaactt cgcgaagtga
      181 tgaaaacacc tctcgggcga gtcggacgcg cggcccttgc gctgatcgga aagttccctt
      241 ccgaagaagt gtctgcgaat ctgcacaggc tcaaggaggt catggaaacg ggaagagtgg
      301 gggtaaaaca atgaggagag taatacgaat gggctcagta gggttagcat tgacggcaat
      361 agcactaagt gtttcacccg ggcttacgca gaatgtggag caggtgaaac ccgtcttcga
      421 gcacgtaatc ccgaacgtcg aaggaaagag catggttgcc gtcgtcgtga cctatcctcc
      481 aggcggcaaa tcgctagccc atcaccatgc ccggtcggca ttcatctacg cttacgtgct
      541 gtcaggcgct attcgaagcc aggttgacga tcagcccgct aaagtctacc aggtcggcga
      601 aggcttcacc gaaatgcccg gctcgtatca caggatcagt gagaatgcga gtaacaggga
      661 ccctgcgagc ctattggctg tcttcgtcgt cgattccaaa gacaagccac tgactatacc
      721 ggacaagaag tagggctcgc gataaacggc taaggagcat gaaatggcta ccagcatcgt
      781 tgatcaaacc aaagaggacc agactcattc atcaatgatg gcctggcgcg tgcatgagtt
      841 tgggccacca gacgtcatga ggttcgaatc gtacgttcct caagctgcag cgaaccgccg
      901 ctttgggaaa ggagactaaa ggatgaaggt tcttatcgtc tattacagca cccacggcaa
      961 tgtctaccgt atggctactc ttgttgctga aggggtgaaa gaaattccgg gagcccaacc
     1021 cgtggtccgc acggtgcccg aactcatacc gaagtcagtg atcgattctc gggaagacat
     1081 gagggccgga agggcgatgc agcaggacgt gcctttggtg actgcggatg atttccgcga
     1141 agcgggtgcc atcgttttcg gcactccgac gcgtttcgga aacgtatcgg cgcaactcaa
     1201 gaaccaaatc gaccaactga cgtcgctctg gctcaaggga gaactggaag gcaagccggc
     1261 cggtgtcttc gtttccacag gaagctcgca cggcggccag gaaacaacag cactgacgct
     1321 aatggcgcca ctgcttcacc tggggatgat tcttgtcggt gtcccgtatt ccattcagga
     1381 actgtttacc acgcagggcg gcggctcgcc gtacggtcca gggcacgtcg cggggaaaga
     1441 taacaagcgc cctatcgacg aacaggaagc agcgatctgt cgcgctcttg gccgccgcct
     1501 agccgcaatc ggtctgagac tgcgccaacc ctgatgaaaa aatgcgcgcc ggcacctagc
     1561 aatgtcggac taggttaagt atggacgatt gcccacgctg ctaccgcaat cagatgcgcg
     1621 gcaagtgcga ccaccgtgac tccggctacg atccccacgt ctctccagaa caggaccccg
     1681 gcgcgaccaa gccttaactc gtagcgcaag aagtggagga tcggtatcag gggcagcgcg
     1741 tgaatgatga ccgtgcagaa ggtcattgtc atggccacgc ctacaggcaa caaaataact
     1801 acgcgatcag gtgaggaggt catattgtcc tagcggcctt agcatcgcct tcgagtggat
     1861 aagcgctgcg cttttgagcc gtgcaaagcc gtgacatgca ggtgatcgca ccgtaaccac
     1921 cctgcgtgct cctcaagcgt ggcggtcgat atcgcaccgc actctcgctt acaggagcgg
     1981 ccagatactt tgcgacggct agctcaaaac taaagtgcat ccgctcccgc ataatcggcg
     2041 gctcttaagt gagttaatga tacggttcaa tatcaggttt acgcgcctat ttgacccttt
     2101 catcgccgag gttgggaacg agctgcacca ggatttccgc aagcgcctcg ccatacccgc
     2161 gcaccagcgc atctggcgtg gcctgctgga ttgcgacgcg gcggccaatg gtgcgctcaa
     2221 gcaccacctt gcttctcgcg ctcgtcaggt cgataagcgc gaattgcacc gtaacgaccg
     2281 cggcgggcgc gtggcctggg cggaaatcgc cgtagagatc actcacggtc gcctcgagaa
     2341 tgtaggacgc cgctcgcacg ctgtcgggct gggcgacgga ctggaatggc cccgcgcggt
     2401 cgagccattc ggccatgcgg ctcccgagca tgcgggcggg ttcagcgatg aaggcgttgt
     2461 acggatcggc gatataccgt acctcgtcca tgcggtagac gagcgcgtct ccagcgaagg
     2521 gggccgccac gcgaacgttg cccatccgaa gtgtctctgg gtggcgcgca gttgcgggcg
     2581 tggtcgccgg cagctcgatg acataggtcg tcgcctgtgg tatcggcgcg ccgatcgagc
     2641 agccggcgat tacgacgcag gcgcagacca caaacgcgag gcggatcaat ctcatttcga
     2701 gtccttcgga agcacgactt tctccggcgg cccacctatt agcgcgcccg ctggatagcg
     2761 cttgacggtt tccgacaacg tgcgcaaatt attagcggtc acccgcaagt cctggaggat
     2821 cgtccgcaca tcgtactgat tgtccccgag catggcgtcg aggcgctgga ccgcttcgtc
     2881 gatgttccgg acgactcgat ccagctcgcc cgattcgccg attttacgca ggcgttcggt
     2941 gagggccgct acgttgtcca ccgtctgatg caaacccggg ttggcgagca gcttgtcgag
     3001 ccgggccgaa gccgacgcga ggttttgcac cgtctcgtcg atcggcgcgc cggcaatgac
     3061 ccggtccacg cgatcgatcg ttcggcgcgc gcttttgagc gcaccctcca attccgtgga
     3121 aatctccgcg accggcacct tgtcgagttt ggcattgagg ttgacgacca acttgtttag
     3181 gttctggccc agatctttga catcggcgtc gttcaggctc gctataaaac gttgagcatt
     3241 ggcgatgatc gtgccagtga ggctcggctc cgacggaacg tacgggtact tcggcgtcca
     3301 atcaaactcg agcggtggat gcgttttcgg atcgaaatag tcaaacgcga gatactgctg
     3361 gccggtaatt ccggcaagct gggtcagaac gcgcaatcct agctccacat tcttttgagt
     3421 gtcctctcgc atctgcgcgg tctgcgccgc gctgctgccg gagatcttgg ctcggacgac
     3481 gatataactc gtgcgtttaa cgagcggcac gtcgcgctgg tacaaagctg aggccgtcac
     3541 gatctcggtt acctggccga gcggcacccc gcggaagtta accggggcgc cgatctccag
     3601 ccccgcaacc gactcgttga agtaagtctc gaacgtgaag gtcggctgaa acagcgatcg
     3661 gccgcccaga acgaacaaga tcgcagccaa gagcgcgagg gtaacgagca cgaacaggcc
     3721 gagtcggcga tagttttgtt tttcgtccat aatcaagata tcgctttgtg catggccgcg
     3781 tcggactggc gattaaagaa ctggcgtacc cgcgggtcgt ccgtatggtc gcgcagctca
     3841 gagggcttgc cttccgcgat aatactgcgc gagaccggat cgagcatgat cgcccggtca
     3901 gcgatggcaa agatgctttg caactcgtga gtcacgacca caaaggtgaa ccccaggttt
     3961 tcgcgcaacg acaggatcgt ccggtccagg ttcgccgcag taatcgggtc gaggcccgcc
     4021 gacggttcgt cgagggtcag gatgtcggag ccaagcgcca tggcgcgggc gatcccggca
     4081 cgcttgagca taccgcctga aagtgctccg ggcatgaacc cttcggcata gcccatttcc
     4141 acctgcctca gcagcatacg cgcggttagg ttcttttctc ccagtcccag atcggtgaac
     4201 tgatccagag gaaaacgcac gttctcgagc accgtgagcg agccaaagag cgcgccgctc
     4261 tggtacatca ccccgagttt gcgttgcagg cgcgctttgt ccggcacacg ggcgcgcacg
     4321 atactcgtcc cgtcgatcag gatgtctccg tccatcggcc ggtacagtcc aatgatgttc
     4381 tt
//
LOCUS       DATDHO010000340         1652 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_63297, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000340 DATDHO010000000
VERSION     DATDHO010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63297"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..221)
                     /locus_tag="VIY07_06515"
     CDS             complement(<1..221)
                     /locus_tag="VIY07_06515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381443.1"
                     /translation="MNKLSYYKIGLFAISAIVLAVIGVIVLGAGTLFQRTALVETYIE
                     ESVQGLDIGSPMKFRGVLVGKVEEITLTSA"
     gene            complement(273..1034)
                     /locus_tag="VIY07_06520"
     CDS             complement(273..1034)
                     /locus_tag="VIY07_06520"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6381444.1"
                     /translation="MSSQREAIIRVEDFTAAYNGQVVLEDVNFEVFTGEIFFILGSSG
                     SGKSTLLKHMIGLYQPAAGRIIIEGHNIAAAQGEERREILKTFGVMYQSGALFGSMTL
                     LENVSLPLEEFTDLPPDAIRLIALMKLKQVGLENYGDLMPSELSGGMQKRGAIARAMA
                     LDPRVLFLDELSAGLDPVTSAELDELVLRLSRSLKITFVVVTHELPSIFAIADRIIML
                     DKQAKGIVAIGNPAELRDHSDNPQVRQFFSRQAPT"
     gene            complement(1041..>1652)
                     /locus_tag="VIY07_06525"
     CDS             complement(1041..>1652)
                     /locus_tag="VIY07_06525"
                     /inference="COORDINATES: protein motif:HMM:TIGR00056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6381445.1"
                     /translation="IIVLVSFLMGVIMAFQGAISLRRFGADIFVANLVGLAMLRELGP
                     LMTAIILAGRSGSAFAAELGTMKVREEIDALKTMGLDPVRFLVVTRVVAAVVMTPLLT
                     VFADLLGLIGGALVMRSFGVPLITFYHQVQYQVSYSSFVGGLVKSFVFGILVAAIGCL
                     RGLQTTTGASAVGESTTRAVVSGIVLIVVTDGIFSVVFYYLNV"
BASE COUNT          419 a          490 c          430 g          313 t
ORIGIN      
        1 gcgctcgtaa gcgtaatctc ctccaccttc ccgaccagca cgccgcgaaa tttcatcggc
       61 gaaccgatat ccaatccctg caccgattct tcgatataag tttccacaag ggccgtgcgt
      121 tgaaacagag tgccggcgcc cagaacgatg acgccaatga cggccaacac aatggcgcta
      181 atcgcaaata acccaatttt atagtagctg agcttgttca tgacagaaag tcagtatatt
      241 tcggcaacct aatggcccag aggtctgtaa tgctacgtcg gagcctgacg agagaagaat
      301 tggcgcacct gcggattgtc gctgtggtcg cgcaattccg cgggattacc gatcgccacg
      361 atgcccttcg cttgtttatc caacataatg atgcgatccg caattgcaaa gatgctcggt
      421 agctcgtggg tcacgaccac gaaggtgatc ttcaagctgc gcgagagacg taagaccagc
      481 tcgtccagtt ccgccgaagt cacaggatcc aaccccgccg acaattcgtc gagaaacagc
      541 acccggggat cgagcgccat ggcgcgggca atggcgccac gcttctgcat tccgccgctg
      601 agctctgacg gcataagatc gccgtagttt tcaagtccga cctgtttgag cttcatcagc
      661 gcgatcaacc gaatcgcgtc tggcggcaga tccgtgaatt cttccagcgg cagagagacg
      721 ttctcgagca aggtcatcga gccgaacagg gcgccgcttt gatacatgac accaaaggtc
      781 ttgagaatct cacgacgctc ctcgccctgc gccgcggcga tattgtggcc ttcgataatg
      841 atcctgcccg ccgcgggttg atacaggccg atcatatgct tcagcaatgt gctcttgccc
      901 gaaccggagc ttcccaggat aaaaaaaatc tcgcccgtga agacttcaaa gttcacatct
      961 tcgagcacga cttggccgtt ataggccgcg gtgaaatctt ccacacgaat aatggcttcc
     1021 cgctggctgc tcatggctgc tcaaacgtta agataataaa aaaccacgga aaaaattccg
     1081 tcggtgacaa cgatgagaac aatgccgctc accacagccc gggtcgtgga ttcacccacg
     1141 gcgctcgcgc cggtggtggt ttgcaatccg cgcaggcaac cgatggcggc caccaggatg
     1201 ccgaaaacaa aggacttcac caagccgccg acgaacgaac tgtagctgac ctgatactga
     1261 acctggtgat agaaagtgat caggggaacg ccgaatgagc gcatcaccaa ggcaccaccg
     1321 atgagaccca gtaagtcggc aaacactgtc agcagcggtg tcatgacaac ggcggcgacg
     1381 acccgcgtca caaccagaaa gcgaaccgga tccagcccca tggttttgag cgcgtcgatc
     1441 tcttcgcgaa ctttcatcgt tccaagctcg gcggcgaagg ccgatccgga gcgtccggcg
     1501 agaataatcg ccgtcatcag tggacctagc tcgcgcagca tcgccaggcc gacaagattc
     1561 gcgacaaaga tgtcggctcc gaatcggcgc agcgaaatcg ccccttgaaa agccatgatc
     1621 acgcccatca gaaaactcac taagacgata at
//
LOCUS       DATDHO010000341         2947 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_362302, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000341 DATDHO010000000
VERSION     DATDHO010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2947
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362302"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..790)
                     /locus_tag="VIY07_06530"
     CDS             complement(5..790)
                     /locus_tag="VIY07_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6381446.1"
                     /translation="MSGPPPIEVRGLRKVFRQTTTGQSVIAIDRLDLTISPREVVAIV
                     GQTGCGKSTFFDLMIGLEAPTEGLIHIGDRSPHADFDYFRGKIATVFQQDRLLPWRTA
                     LDNARLPLELIGLPEAEQRERALNWLNRLGLSQFTNAYPHELSGGMRQRVAIARAFAV
                     EPDILLADEAFGHLDEVTAAELRETFLRLARECGSTAILITHQLEEAIGVGDRIVVFG
                     RSAKLLADIQVSRWKKESRPLLREAIQSTLQNNRADPRLAGTS"
     gene            complement(787..1557)
                     /locus_tag="VIY07_06535"
     CDS             complement(787..1557)
                     /locus_tag="VIY07_06535"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6381447.1"
                     /translation="MTEEYRESVPALTFPRQTFVSLLVFALVWETLSYLAPYLGIPPF
                     AIPSFVRIAKSVATITPIDIVVTLARVIAALIISFVLGLALAMAMYRSESLNKYLHPM
                     IRLFMAVPVVSWILFAVLWFPGVEFRIAFVLVIVCGPVFLIDTLDAMHGVPRDLRRMM
                     QSFRPTTWQYFFKLMLPAIVPTIFTSWKVNISLAIRVVTIAELVGAVTGIGHQLSVAQ
                     ELFSVADVFAWTLVLVALLFLLEAIVARVETRVLRWRA"
     gene            complement(1579..2565)
                     /locus_tag="VIY07_06540"
     CDS             complement(1579..2565)
                     /locus_tag="VIY07_06540"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381448.1"
                     /translation="MLRLSRRGVAALTVALTITAGGIASSPVNAQQKPVIRVSSLTLP
                     VFNPLVWNIMKARGFDAKNGFELDARAYPSISAFYAAFATGETDVLIGGPTILQKLYQ
                     EGVPVRIVATGFTLADLVIFTKNDKIKSLLDMKGKQLAVDMGGSQFQVTKIYTAAKGI
                     DLGKDITVVNANFAVARAQLEADRVDAALVIEPLASIIIKQNPDWKVIFNGAEGWKEI
                     TGQDGWEIVTAMRGDAIAKVPNAPKMLIAALQDVAQFMKTDTAEADKIANETLKLPPG
                     ILTAALASNRLQMIIHPAWEPATRKSITDMMERAVKAGFYEKMPDEKIIYSP"
     gene            2703..>2947
                     /locus_tag="VIY07_06545"
     CDS             2703..>2947
                     /locus_tag="VIY07_06545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6381449.1"
                     /translation="MPHIAAPDGTRLYYEEAGSGTPVIFIHEYAGDYRTWEMQMRFFS
                     RAHRCITYSQRGYPPSDIPQDGAKYSQDIARADALAV"
BASE COUNT          609 a          860 c          901 g          577 t
ORIGIN      
        1 gacctcagga cgtgccggcg aggcgcggat ccgcacggtt gttctgcagc gttgactgta
       61 tcgcttcgcg aagaagcggg cggctttctt ttttccaccg gcttacctgg atgtcggcaa
      121 gaagttttgc cgacctgcca aacaccacga tgcgatcacc gacaccgatc gcttcctcca
      181 gctgatgcgt gatcaggatc gcggtcgagc cgcattcgcg cgccaacctg agaaatgttt
      241 ctcgtaactc ggccgccgtc acctcatcga ggtggccgaa agcttcgtcg gccaggagaa
      301 tatcgggctc gaccgcaaac gcgcgcgcaa tggccacgcg ctgccgcatg cctcctgaca
      361 gttcatgcgg ataggcattg gtgaactggc tcaggccaag ccggttgagc cagttgagtg
      421 cacgttcgcg ctgctccgcc tcgggcaggc caataagctc gagcggcagc cgggcattgt
      481 cgagagccgt gcgccacggc agcaatcggt cctgctggaa gacggttgcg atcttgccgc
      541 ggaaataatc gaaatcggcg tgcggacttc ggtccccgat atggatcagt ccctccgtcg
      601 gcgcctcgag gccgatcatc aggtcgaaaa aagtggactt tccgcaaccg gtctgaccga
      661 cgattgccac gacctcgcgc ggcgatatgg tcagatcgag acggtcgatt gcgatcacgg
      721 attgcccggt cgttgtctgg cgaaagacct tgcgcagacc gcgcacttcg ataggcgggg
      781 ggccactcat gctcgccacc ggagaacgcg agtctcgacg cgcgcgacga ttgcctcgag
      841 caggaacagc aatgccacca ggaccagcgt ccaggcgaat acgtcggcga ccgagaacaa
      901 ttcctgcgca accgacaatt gatgtccgat gccggtcacc gcgccaacaa gctcggcgat
      961 cgtcacgaca cggattgcca ggctgatatt gaccttccag ctggtgaaga tcgtcggcac
     1021 gatcgcggga agcatcagct tgaagaaata ttgccaggtc gtcggccgga aagactgcat
     1081 catgcgacga agatcgcgcg gcacgccgtg catggcatcg agcgtgtcga tcagaaacac
     1141 gggtccgcac acgatcacca gcacgaaagc gatgcggaat tccacgcccg gaaaccacag
     1201 caccgcgaac aggatccagg aaaccaccgg cactgccatg aacaggcgga tcatggggtg
     1261 gagatatttg ttcagggatt cggagcggta catggccatc gcaagcgcaa gcccgagcac
     1321 gaaggaaatg atcagggccg cgatcacgcg cgccagcgtg acgacaatgt cgatgggcgt
     1381 aatggttgcg acgcttttgg cgatacgcac aaagctcggt attgcgaacg gcggaatccc
     1441 gagatagggc gccaaatacg agagcgtttc ccaaacgagt gcaaagacca gaagagagac
     1501 gaaggtctgg cgcggaaagg tcagggccgg gacagactcg cggtactcct cagtcatcgt
     1561 gcaggcgcgc ttacgcgctt acggggaata gatgattttc tcgtccggca tcttttcgta
     1621 gaagcccgcc ttgaccgcgc gctccatcat gtcggtgatc gacttgcggg tggcgggctc
     1681 ccatgcggga tggatgatca tttgcaggcg gttgcttgcc agcgcggcag tcaggatgcc
     1741 gggcggaagc ttgagtgttt cgttggcaat cttgtccgct tccgccgtat cggtcttcat
     1801 gaattgggcg acgtcctgca gggcggcgat cagcattttt ggcgcgttgg gaactttcgc
     1861 gatcgcgtcc ccgcgcatgg cggtcacgat ttcccaaccg tcctggcccg tgatttcctt
     1921 ccatccttcg gcgccgttga aaatcacctt ccagtcgggg ttttgcttga tgatgatgct
     1981 ggcgagcggc tcgatgacca gcgccgcatc cacacggtcg gcctcgagtt gcgcgcgggc
     2041 gacggcaaaa tttgcgttga ccacagtgat gtctttgccg agatcgatac ccttggcggc
     2101 ggtgtagatc ttggtgacct ggaactgcga accgcccatg tccacggcaa gctgcttgcc
     2161 cttcatgtcg agcagcgatt tgatcttgtc gttcttggtg aatatgacga ggtcagccag
     2221 cgtgaagccg gtcgcaacga tacgaaccgg cacgccttcc tgataaagct tctgcaagat
     2281 cgtggggccg ccgatcagta cgtcggtctc accggtggcg aaggcggcat aaaaagccga
     2341 aatcgatgga taagctcttg cgtcaagttc gaagccgttt ttggcatcga agccgcgtgc
     2401 cttcatgatg ttccagacca gcgggttgaa caccggtaag gtaaggctcg aaaccctgat
     2461 caccggcttt tgctgtgcgt tcaccggcga cgacgcgatc ccgccggccg ttatcgtgag
     2521 agcaaccgtg agcgcggcaa cgccgcggcg agacaacctg agcatcgaca gttccccctc
     2581 gtggtcgttc aagctgtggt cttgctggtc aattggctgg tcacttggct tgaatgcgag
     2641 cgcgacttta ctctgctttc atttgcgtgc aaataattga tcgcgagtag ccggagggcg
     2701 tgatgccgca catcgctgcg ccagatggaa cgcggcttta ctacgaagaa gccggaagcg
     2761 gcacaccggt gatcttcata catgaatacg ccggcgacta ccgcacgtgg gagatgcaga
     2821 tgcggttttt ctcccgcgct caccgctgca tcacttacag ccagcgaggc tatccgcctt
     2881 ccgacattcc gcaggacggg gcgaaataca gccaggacat cgcgcgcgcc gacgcgctcg
     2941 cagtcat
//
LOCUS       DATDHO010000342         4371 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_63393, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000342 DATDHO010000000
VERSION     DATDHO010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4371
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_63393"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..250
                     /locus_tag="VIY07_06550"
     CDS             <1..250
                     /locus_tag="VIY07_06550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381450.1"
                     /translation="TGYPEKILSDSYDFMVKECIWDANSGLSTERINFTADLMTKVGN
                     IKEGKTPTYEDVVDTTFAKKAIEQLGEWKGPICPTAAF"
     gene            335..1162
                     /locus_tag="VIY07_06555"
     CDS             335..1162
                     /locus_tag="VIY07_06555"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6381451.1"
                     /translation="MTVANQVEADSVAEGEPRAAAVTAAWWERPALFRYGFVLLILVI
                     WEIVGPFINPIFFTYPTKIAAAFYTTTVSGELPYFLAQSLEVMVYGLSIALIVGIPLG
                     IAMARVRWLDWALDLPINALYATPLVAVVPLLVLWFGIYLKAKIIVVFLFAVFPVLIN
                     TYQGVRECDKNMLEVAYSFRSSEWRVWQDVLLPFSVPYIIAGIRLAIGRGLIGMIIAE
                     FYTTISGLGFMITRYANVFEMDKTFVPVIVLMVLGVSLTSLLKWAGRRIAPWSSANR"
     gene            1243..1746
                     /locus_tag="VIY07_06560"
     CDS             1243..1746
                     /locus_tag="VIY07_06560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381452.1"
                     /translation="MILGLSVQNFTIVHVVISLMAIASGILVLIGMFGSRRLPGWTAF
                     FLLTTVLTSLTGFLFPIRGFTPALGTGIVSCVLLALALYALYGKRLAGAWRWIYVATA
                     SSALYLNVLVLIVQSFQKLPFLKPLAPTQSEPPFLIAQVIALIVFLLAGIAAALKFRP
                     ANDLPAG"
     gene            complement(1831..1992)
                     /locus_tag="VIY07_06565"
     CDS             complement(1831..1992)
                     /locus_tag="VIY07_06565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEY6381453.1"
                     /translation="MSKVVSFLKDESGATAIEYGLIAAGISVVIIATVNAIGSSLNAK
                     FDSISTQLK"
     gene            complement(2309..3001)
                     /locus_tag="VIY07_06570"
     CDS             complement(2309..3001)
                     /locus_tag="VIY07_06570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047443 -
                     4-hydroxy-4-methyl-2-oxoglutarate aldolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-carboxy-4-hydroxy-2-oxoadipate
                     aldolase/oxaloacetate decarboxylase"
                     /protein_id="HEY6381454.1"
                     /translation="MKPVVIRNINRADSNAIGTLAAVGVSTAHEALGRSGLMKPYMRP
                     IWPGAQIAGPAVTVLAQPGDNWMIHVAVEQCQKGDVLVVGCTADNTDGMFGELLATAL
                     RARGVIGLVIDAGCRDVRPISEMRFPVWSKAISAKGTVKATLGAVNVPVVCAGVNVEP
                     GDVVVADDDGVVVIPKKLATETAQKAQKRKDDEDAKRKQLEAGTLSLDMYKMREPLAK
                     AGLIYVDRAEDS"
     gene            complement(2998..3720)
                     /locus_tag="VIY07_06575"
     CDS             complement(2998..3720)
                     /locus_tag="VIY07_06575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018493053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L deacetylase family protein"
                     /protein_id="HEY6381455.1"
                     /translation="MPDQKTGLVITAHPGDFVWRAGGAIALHAKRGYRVKIVCLSYGE
                     RGESQFAWKEPGATLEKVKAGRRDEAERAAKLLGAEIEFFDCGDYPLNLNETHFDRMV
                     DIYRELGPSFVLTHALEDPYNFDHPNAAHFAQETRVVAQAMGHKPDAKYKYSAPPVFL
                     FEPHQPEMCNYKPNLILKIDEVWEQKYKAFQILAAQKHLWAYYERVALNRGIQGSRNT
                     GVPMTYGEAYQRLFPTVEEILQ"
     gene            3813..>4371
                     /locus_tag="VIY07_06580"
     CDS             3813..>4371
                     /locus_tag="VIY07_06580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381456.1"
                     /translation="MANPPATTLRVAIGDYPHTLPLKRGEIVSPWLKLEFIEVKPMHQ
                     AFKPMVREHAYDASEMALVTYFQAKDHEKGLVLLPAAMLARFQHGTMLFNAERGILAP
                     KDLPGRRIGVRSYSQTTGVWVRGILQNDYGIDLGEVQWVTFEDGHVAEAKDPPGVIRA
                     RADQDITTMLIAGELDAAIYGAALPK"
BASE COUNT          830 a         1308 c         1269 g          964 t
ORIGIN      
        1 aaccggctat ccggagaaaa tcctgtccga cagctacgat ttcatggtca aggaatgcat
       61 ttgggacgcc aacagcggac tcagcaccga gcggatcaat ttcaccgccg acctcatgac
      121 caaagttggc aatatcaaag agggcaagac gccgacatat gaggacgtgg tcgatacgac
      181 gttcgcaaaa aaggcgatcg agcaactcgg cgaatggaaa gggccgatct gtccgaccgc
      241 ggcgttctga gcggcgctga tcacgctggc cgggcgccgc catcggcggc gcccgtcgca
      301 ctagaggatc aatgtggccc cgggaaacac gacgatgacc gttgccaatc aagtcgaggc
      361 tgattcagtt gccgagggcg agccgcgagc cgcggcggtc acagcagcgt ggtgggaacg
      421 gcctgcgctt ttccgctatg gctttgtcct cctgatcctt gtcatctggg aaatcgtcgg
      481 tcccttcatc aaccccatct tctttaccta tcccacgaag attgccgccg ccttctacac
      541 aacgacggta tccggcgaat tgccgtactt tctcgcgcaa agcctggagg ttatggttta
      601 tggcctcagc attgcgctca tcgtcggcat ccctctcggc atcgcgatgg cgcgcgtgcg
      661 ctggctcgac tgggcgctcg atctgccaat caacgcactt tatgcaaccc cattggtcgc
      721 cgtcgtaccg ctgctggtgc tgtggttcgg catctacctg aaagccaaga tcattgtcgt
      781 gtttctgttc gccgtgtttc cggtcctgat caacacttac cagggcgtcc gcgagtgcga
      841 caaaaacatg ctcgaagtgg cgtattcgtt tcgctcgagc gaatggcgag tatggcagga
      901 cgttctgctg ccgttttcag tgccgtacat aatcgccggg atacgcctcg cgatcgggcg
      961 cggactgatc ggcatgatca ttgccgagtt ctatacgacc atttcaggcc tgggcttcat
     1021 gatcacgcgc tacgccaatg tgttcgagat ggacaagacc tttgttcccg tgatcgtgct
     1081 gatggtgctg ggcgtgtcgc tgacctcgct gctgaaatgg gccggccgtc gcatcgcgcc
     1141 ctggagcagc gccaaccgtt aggctttccg tcgtattgaa tttgtcgtgc cgccgcgcaa
     1201 acttgccccg ccggcatttc accacgtctg cggaggcgcg tcatgatcct gggcctgtca
     1261 gttcagaatt ttacgatcgt tcacgtcgtc atcagcctga tggcaattgc aagcggtata
     1321 ctggtgttga tcggtatgtt tggctcgcgc cgactcccag gctggaccgc attttttctg
     1381 ctcacgacag tgctcaccag ccttaccggg tttttgtttc cgatccgcgg ttttacgccg
     1441 gcgctcggaa ccggaatcgt ctcgtgcgtg ctgctggcgt tggcgcttta tgccctctac
     1501 ggcaagcgcc tcgcgggcgc atggcgctgg atctacgttg ccactgcctc gagcgcactt
     1561 tatctcaacg tgctggtcct catcgtgcaa tcgttccaga aattaccgtt cctcaagccg
     1621 ctggcgccga cccagtccga gccgccgttc ctgatcgcgc aagttatcgc gctcattgtc
     1681 ttccttttgg caggcattgc cgctgcgctt aagtttcgtc cggccaatga cctgcctgcg
     1741 ggttgattga aacgcgtcgg caggggatgc ccaaaatgga agaagccgcc ggtatcggcg
     1801 gcttcaaacc aagtttcgaa cgtgcgacgc ttacttaagc tgcgtcgaga tgctgtcgaa
     1861 cttcgcgttc aggctcgagc cgatcgcgtt cacggtcgca atgatcacaa ccgaaatgcc
     1921 agcagcgatg aggccatact cgatcgcggt ggcgcccgac tcgtccttca ggaaggaaac
     1981 aaccttagac atgagacatc ctccatgtgg ccagtaatca tctgtacaga tgatggcagc
     2041 accgtaccgc ccgcccgtta aaaagacgct tcgtcggagc agaggaaatt gtttcaaatt
     2101 ttatcgaaac aggcgtggct ttttttccgc tagggcggcg aaagcaaagc gattggcgcc
     2161 caagcccatt tttcaagtga atccgtatca agtcggctcg agatcgaacg gtggacagtt
     2221 cacggctgcc gcgaagcacg cccgatatta acgagccatt atccacaccg aaaaagagtt
     2281 tgaagttcgt gggtgccaga cagttccact aactgtcttc ggcgcgatca acatagatca
     2341 agcccgcctt ggccagcggc tcgcgcattt tgtacatgtc caggctcagc gtgccggcct
     2401 cgagctgctt gcgcttggca tcctcgtcat ccttgcgctt ttgcgctttc tgggcggttt
     2461 cggtcgcgag tttcttcgga atcacgacga cgccgtcgtc atccgcaacc acaacgtcgc
     2521 ccggttcgac gttgacgccc gcgcagacaa ccggaacgtt gaccgcgccg agggtcgctt
     2581 tcaccgtacc cttggccgag atcgcctttg accaaaccgg aaaacgcatt tcggaaatcg
     2641 gacggacgtc tcgacaaccc gcgtcaatga cgagcccgat caccccgcga gcacgcaacg
     2701 ctgtcgccag cagttcgccg aacatgccgt ccgtattgtc cgcggtgcat ccgacaacga
     2761 gaacgtcgcc tttctggcat tgctcgacgg cgacgtggat catccagttg tcgcccggct
     2821 gcgccagcac ggtgaccgcc ggccccgcga tctgcgcgcc gggccagatc ggacgcatat
     2881 agggcttcat gagaccggat cggccgaggg cctcgtgcgc ggtggagacg ccgactgctg
     2941 caagcgtgcc gatggcattg ctgtcggccc gattgatgtt tcggataacg acgggcttca
     3001 ttgcagtatt tcctctacgg tcggaaagag cctttggtag gcctcgccat atgtcatcgg
     3061 cactcccgtg ttgcggctgc cctggatgcc ccggttgagc gccacgcgtt catagtacgc
     3121 ccacagatgt ttttgggctg cgagtatctg gaacgccttg tacttttgct cccacacctc
     3181 gtcgatcttc aaaatgagat tgggcttgta attgcacatt tcaggttggt gcggctcgaa
     3241 cagaaatacc ggcggagcag aatacttgta ttttgcatca ggcttgtgcc ccattgcttg
     3301 agcgaccacc cgcgtctcct gtgcgaagtg cgcggcgttt gggtgatcaa agttgtaggg
     3361 gtcctcaagc gcgtgagtga gcacaaagga ggggccaagt tccctataga tatcaaccat
     3421 acggtcgaaa tgcgtttcat tcaggttgag cggatagtcg ccgcagtcga agaattcgat
     3481 ttccgctccg agaagctttg cggcccgttc ggcttcgtcc ctgcggccgg cctttacttt
     3541 ttcaagcgtg gcgcccggct ccttccacgc gaactggctc tccccacgct cgccatacga
     3601 caggcagaca atcttgacgc ggtaaccccg cttggcatgc agggcgatcg cgccgccggc
     3661 gcgccaaaca aaatcgccgg gatgagctgt gatgacgagc ccggtcttct gatccggcat
     3721 tgcgcgctcc ttttccgtgc cggcttgtta aactaggttg agtggcgggc ggtcaagccg
     3781 tgtgtggccg cgttcgagcg gagcgtttca caatggcaaa tccccctgcg accactctgc
     3841 gcgtcgcgat cggcgactat ccgcacacgc tgccgctcaa gcgcggagag atcgtctcgc
     3901 cgtggctgaa gcttgaattc atcgaggtga agccgatgca ccaggcgttc aagcccatgg
     3961 tgcgggagca tgcctatgat gccagcgaga tggcgctggt gacctatttc caggccaagg
     4021 atcacgagaa ggggctagtt ctgcttcccg ccgcgatgct cgcgcgcttc cagcacggca
     4081 ctatgctgtt caatgcggaa cgcggcatcc ttgctccgaa ggacctgcca ggccgccgca
     4141 tcggcgtgcg ctcgtacagc cagaccaccg gtgtgtgggt ccgcggcatt ctgcagaatg
     4201 actacgggat cgatctcggc gaagtacagt gggtgacgtt cgaggatggt cacgtcgctg
     4261 aggcgaaaga tccgccgggc gtgatccggg cgcgtgccga tcaggacatc accaccatgc
     4321 tcattgccgg ggagttggat gccgcgatct atggcgcggc gctgccgaag g
//
LOCUS       DATDHO010000343         5145 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_362486, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000343 DATDHO010000000
VERSION     DATDHO010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5145
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362486"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VIY07_06585"
     CDS             complement(<1..458)
                     /locus_tag="VIY07_06585"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY6381457.1"
                     /translation="MASVGHNLKRIGAEVLAEMLAGYGVTHVFMVPAVLRRTFAEMER
                     RTEIARVHCHGEKSAAYMADGYARASGKPGVCMAQVIGALNLAAGLRDAYLAHSPIIA
                     MTGGRDPKTKFRKVYQEVDDVPAFEPVTKMNVTIDDVSRIPDMLRQAFRTA"
     gene            complement(458..856)
                     /gene="msrB"
                     /locus_tag="VIY07_06590"
     CDS             complement(458..856)
                     /gene="msrB"
                     /locus_tag="VIY07_06590"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019172366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEY6381458.1"
                     /translation="MQKQYPVTHTEAEWRKILTPEQYAIMREHGTEMPGSCALLHEKR
                     AGTFRCAACDQPLFVSKVKFESGTGWPSFNDPLPGAIETETDRSHGMVRDEVHCGRCG
                     SHLGHVFDDGPPPTHLRYCINGVALKFEPA"
     gene            complement(919..1890)
                     /locus_tag="VIY07_06595"
     CDS             complement(919..1890)
                     /locus_tag="VIY07_06595"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY6381459.1"
                     /translation="MPARKITRQDMREAAEKYKNWGKWGPNDEIGTLNYTAPEDIIGA
                     ARLVRKGKVISLALNFDHTGPQGAKSKYPAMGRTNPIHTMLRTGTDAYSGALDKRGIR
                     AADDMVTMPLQCGTQWDGLGHVFYENYMWNGYDCREVTSAGAQKCGIEKTKNRMVGRG
                     VFLDVARYKGVESLHDGYGITNDDLYGTAKKQNVELKRGDYIIVRTGMMERCQKAGSW
                     DGYPGGDAPGFAFETLDFVRDTQLAALASDTWGCEVRPNESEEGINQPWHWITIPIMG
                     MTMGEIFNLKELADDCEQDKVYEFLFVAPAIPITGAVGSPVNPLAIK"
     gene            2017..2994
                     /locus_tag="VIY07_06600"
     CDS             2017..2994
                     /locus_tag="VIY07_06600"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6381460.1"
                     /translation="MHSRAKLAAICAAFSALALGIFPAAAGYPEKAVKIVVPFAPAGP
                     TDVMARLIAQKLSESLKQQFYVENHPGAGGNIGMMQVAKSAPDGYTLLVTSSAFMVNP
                     SLYAKNPYDPFKDFAPVTLAAASPNILVVNADFPAKTVKELVELIKKEPGKYNYAMPG
                     AGTTPHLAGELFKLTFKLDLATVPFNGAGPAIQSAVAGHTPVALTALPPTAPQIQAGK
                     LRGLAVTATKRSAALPDVPTMAEAGVSGQESETMQGIFLPAGTPKAIVDLLNSEIVKA
                     MALPDLKEKCAQLGFEVVANKPDEFTAYIKKEVDKWGKVIKDANIPQIQ"
     gene            3015..4184
                     /locus_tag="VIY07_06605"
     CDS             3015..4184
                     /locus_tag="VIY07_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HEY6381461.1"
                     /translation="MRIVGIRETAIPLKSTLANSSFDFTEMTTSVVAVITDVVRNGRP
                     VCGFAFNSTGRYACGAQMRARFIPRILSADPGSLLDDSGDNLDPTKIFNCMMRREKAG
                     GHSERSIAIGTIEVAVWDAVAKIADKPLHVVLSERFNGGKPAEQVFCYVGGGWYWPGQ
                     TVRDLQDEMRYHLDAGYTMVKMKVGGLPLEDDVRRLEAVLEVVGSGDNLAVDANCKFG
                     RDEALRYARALAPFNLRWFEEPCDPLDFALFSELATHYENPLATGENLFSTPDVENLV
                     RFGGFRAERDVIQIDPPQAYGIGQYATTIEMLAGHGWSRASLFPHGGNQMSLAIAAGF
                     GLGGAESYPGVFGDFGGFADDAKIENGAISLSDRPGIGFEGQARLYRIMRELAAI"
     gene            4328..4687
                     /locus_tag="VIY07_06610"
     CDS             4328..4687
                     /locus_tag="VIY07_06610"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY6381462.1"
                     /translation="MSAVKPPTVAFVIPCYNEQAGIQHTLTCLLADITRLEKSKAISP
                     GSYVTLVDDGSTDRAWTLIEKISRAHPKRVHGLKLSRNVGHQNGCWPGCSPRSEKRTL
                     SFRLTQTCRTTCLSSQG"
     gene            4666..>5145
                     /locus_tag="VIY07_06615"
     CDS             4666..>5145
                     /locus_tag="VIY07_06615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381463.1"
                     /translation="MSVVARMIENFAGGAEIVFAVRKKRTSYSWFKRSSADLYYRILN
                     WLGAEIIPHHADFRLMSDRALRALSLYGEAHVFLRGLAVQLGFTTATVSYDRLPRLHG
                     DTKYTLAKMVALAVNGITFADGAANPNDCLDGHHPVRRVPRMSVWVFVNWIAGHTVQG
                     "
BASE COUNT         1001 a         1578 c         1499 g         1067 t
ORIGIN      
        1 gcggtgcgaa aggcctgccg cagcatgtcg ggaatacgcg acacatcgtc gatggtgaca
       61 ttcatttttg tcaccggttc gaacgcgggg acgtcgtcga cttcctgata gaccttgcgg
      121 aattttgtct tcggatcgcg cccgcccgtc atggcgatga tcggcgaatg cgccagatac
      181 gcatcgcgca ggccggccgc gagattgaga gccccgatca cttgcgccat gcagaccccg
      241 ggcttgccgg acgcgcgcgc atagccatcg gccatgtagg ccgccgattt ttcgccatgg
      301 caatgcacgc gcgcgatctc ggtccgccgc tccatctcgg caaaggttcg ccgcagcacg
      361 gcgggcacca tgaatacgtg cgtgacaccg tagcctgcca gcatctcggc gagaacctcg
      421 gctccaatgc gcttgagatt gtgtccgaca ctcgccatca ggcgggctcg aatttcagcg
      481 cgacaccgtt gatgcagtag cgcaaatggg tcggcggcgg tccgtcgtcg aacacatgtc
      541 cgagatgact cccacagcgg ccgcaatgga cttcgtcacg aaccatgccg tggcttcgat
      601 cggtctcggt ctcgatcgcg ccaggcaagg gatcgttgaa acttggccat cccgtcccgc
      661 tttcgaattt caccttcgag acaaacaaag gctggtcaca ggcggcgcag cggaaagtgc
      721 ccgcgcgctt ctcgtgcaac agcgcacagc ttccgggcat ctccgtacca tgctcgcgca
      781 tgattgcgta ttgctcgggc gtcaggattt tgcgccactc cgcttcggtg tgtgtgacgg
      841 gatattgctt ctgcatgttc aaattccttt ctcggctcat ccccgggtca ttgcgcagaa
      901 cgccactcgg aggagccgtc acttgatcgc cagcggattg actggagagc ccaccgcccc
      961 ggtgattgga atggccggcg ccacgaacag aaattcgtag actttgtcct gctcgcagtc
     1021 gtcggccagt tctttcaggt taaagatctc gcccatggtc attcccatga tgggaattgt
     1081 gatccaatgc cagggctgat tgatcccctc ctcgctttcg ttcggacgca cctcgcagcc
     1141 ccaggtgtcg ctggcaagcg cggccagttg cgtgtccctg acgaaatcaa gcgtctcgaa
     1201 agcaaagccc ggcgcgtcgc cgccgggata gccatcccag ctccccgcct tctggcagcg
     1261 ctccatcatg ccggttcgca cgatgatata gtcgccgcgc ttgagctcga cgttttgctt
     1321 cttcgcggtt ccgtaaaggt catcgttggt gattccgtag ccgtcatgga gcgactcgac
     1381 gcccttgtag cgcgccacgt cgagaaacac gccgcgaccc accatccggt tcttagtttt
     1441 ctcgatgccg catttctgcg cccctgccga cgtcacctcg cggcaatcgt agccattcca
     1501 catgtagttc tcataaaaga catggccaag gccgtcccat tgcgtgccac actggagcgg
     1561 catcgtcacc atgtcgtcgg cggcacgaat gcctcgcttg tcgagcgcac ccgaataggc
     1621 gtccgtgccg gtgcgcagca tggtatggat cggattggtg cgccccattg cgggatattt
     1681 gctctttgcg ccctgcgggc cggtgtgatc gaagttcagt gcaagcgaga tcactttgcc
     1741 tttcctgacc aggcgcgcag caccaatgat gtcctctgga gccgtgtagt tgagcgtgcc
     1801 gatctcgtca ttcggtcccc acttgcccca attcttgtac ttctcagcgg cctcgcgcat
     1861 gtcctgacgg gtgatctttc tcgccggcat tgaatttcct ctgacgaaaa taagaagatg
     1921 ttggccggcg aaatacagcc tgtagccgcg accgatgcaa gtcccgctgg caaggtcgtc
     1981 gtgcaatgct acgatgacaa aaatgggagg aaccacatgc attcgagggc aaagctcgct
     2041 gcgatttgtg ctgcattttc cgcgctggca ctcggcattt ttccagcggc agccggatat
     2101 cccgagaaag cggtaaagat cgtcgtgccc ttcgcacccg caggcccgac cgacgtcatg
     2161 gcgcgcttga ttgcacaaaa actttcggag tcgctgaaac agcagttcta tgtcgaaaac
     2221 catcccggtg cgggcggcaa catcggaatg atgcaggtcg caaagtcggc gcccgacgga
     2281 tacaccttgc tggtgacaag ctcggcattt atggtcaatc cgagccttta cgccaagaat
     2341 ccctacgatc cattcaagga tttcgcgccg gtcacgcttg cggcggcttc accgaatatc
     2401 ctcgtagtca acgcggattt cccggccaag acggtgaagg agctcgtcga gctcatcaag
     2461 aaagagcctg gcaaatacaa ctatgcaatg cctggcgcag gaacgacgcc gcatcttgca
     2521 ggggaattgt tcaaactcac gttcaagctc gatctcgcga ccgtgccgtt caatggggcc
     2581 ggtccggcaa tccagtcggc ggtcgccggc catacgccgg tcgccttgac cgcgctgccg
     2641 ccgactgcgc cgcagataca ggccggcaag ctgcgcggcc tcgcagtcac cgcgaccaag
     2701 cgctcggccg cgctgcccga cgtgccgacc atggccgagg ccggcgtgtc ggggcaggaa
     2761 tccgagacca tgcaaggcat cttcctgccg gccggaacgc caaaagcaat tgtcgacctg
     2821 ctcaacagcg agattgtcaa ggccatggcg ctgccggacc tcaaggaaaa atgcgctcaa
     2881 ctcggcttcg aggtggttgc aaacaagccg gacgaattca ccgcgtacat caagaaagaa
     2941 gtcgacaagt ggggcaaggt gatcaaggac gccaacatcc cgcagattca gtagctctca
     3001 ggcctgcctg agcaatgcgc atcgtcggca tccgcgagac ggcaatcccg ttgaagtcga
     3061 cgcttgccaa ttcgagcttc gacttcaccg aaatgacgac gtcggtcgtc gcggtcatca
     3121 ccgatgtcgt tcgcaacggc agaccggtct gcggattcgc gttcaactcg actggccgct
     3181 acgcctgcgg cgcgcagatg cgcgcccgtt ttatcccgcg cattctttcc gccgatccag
     3241 gatcgctgct cgatgactcc ggcgacaacc tggacccgac aaagattttc aattgcatga
     3301 tgcggcggga aaaagcgggt ggccattccg agcggtcgat cgccatcggc accatcgaag
     3361 tggcggtttg ggatgccgtc gccaagatcg ccgacaagcc attgcacgtc gtgctgtccg
     3421 agcggttcaa cggcggaaaa cctgcagagc aggttttctg ttatgtcggc ggcggctggt
     3481 actggccggg tcagaccgtc cgcgaccttc aggacgagat gcggtatcat ctcgacgccg
     3541 gctatacgat ggtcaagatg aaagtcggcg gccttcccct tgaggacgat gtgcgccggc
     3601 ttgaggccgt gctcgaagtc gtcgggtcgg gagacaatct cgccgtcgat gcgaactgca
     3661 aattcggccg cgatgaggcg ctccgctatg ccagggcgct tgcccctttc aatctgcgct
     3721 ggttcgagga gccgtgcgat ccgctcgatt tcgcgctttt ttccgagctt gcgacgcact
     3781 acgagaaccc gttggcgacc ggcgaaaatc tcttctcgac gcccgatgtc gaaaacctgg
     3841 tccggttcgg cggttttcgc gccgaacgcg acgtgatcca gatcgacccg ccgcaggcct
     3901 acggcatcgg acaatacgcc accacgattg aaatgctcgc cgggcacggc tggagccgcg
     3961 cgtcgctttt tccccatggc ggcaaccaga tgtcgctcgc gatcgcggcc ggtttcggcc
     4021 tgggcggagc ggagtcctat cccggcgtat ttggcgactt cggcggattt gctgacgatg
     4081 ccaagatcga gaatggcgca atttcgctct ccgaccggcc cggcattggc ttcgaaggcc
     4141 aggctcgcct ctatcggatc atgcgcgaac tggcggcgat ctgagccttt ccggcaagga
     4201 acagccgggt ttcagaaact gttagagaat gcggcgcagt aaaagctttg taaacgctgc
     4261 cgcggcacac tttcgtaacg tggttgtgag acatgattgg agaattccaa actccggttg
     4321 cctggttatg tctgcagtca agccacccac cgtcgcgttt gtcattccct gctacaacga
     4381 gcaggctggc attcagcaca cgctcacgtg cctgctcgcc gacatcacca ggcttgaaaa
     4441 atcgaaggcc atctcgccgg gaagttatgt gactttggtc gatgacggga gcacggaccg
     4501 cgcctggacc ctgatcgaga aaatctcgcg cgcgcacccg aaacgcgtgc atggtctcaa
     4561 attgtcacgc aatgtcggac accagaatgg ctgctggccg ggctgctcgc ccagatcgga
     4621 aaagcggacg ctgtcatttc gcttgacgca gacttgcagg acgacatgtc tgtcgtcgca
     4681 aggatgatcg agaattttgc cggtggagcg gaaattgttt tcgccgtccg gaagaaacga
     4741 accagctaca gctggttcaa gcgatccagc gctgacctct actaccgcat tctcaattgg
     4801 ctgggtgccg agatcatccc gcaccatgct gacttccgtc tgatgagcga tcgcgcgctg
     4861 cgcgcgctgt cgctatacgg tgaggcgcac gtattcctgc gcggtcttgc tgttcagctc
     4921 ggcttcacga ccgcgaccgt ttcctacgac aggcttcccc ggctgcatgg cgatacgaag
     4981 tatacgctcg cgaagatggt ggcgctcgcc gtcaacggga tcaccttcgc tgacggtgcg
     5041 gccaatccga atgattgcct tgatgggcat catcctgttc gtcgtgttcc tcggatgagt
     5101 gtctgggtat ttgtaaactg gatcgccggc cacactgtgc aagga
//
LOCUS       DATDHO010000344         1519 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_264543, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000344 DATDHO010000000
VERSION     DATDHO010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1519
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264543"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(228..1241)
                     /locus_tag="VIY07_06620"
     CDS             complement(228..1241)
                     /locus_tag="VIY07_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEY6381464.1"
                     /translation="MEYFAGLDVSMDETHICVVDRNGGIVLETRASSSAEAIAAGLTK
                     APKCQQIVFETGRMAPTLYHGLDALGLPVTCIESRQAYQALKSLGTHKTDRNDARGLA
                     HLARTGFFKPVHVKSLPAHAVRALIIARKKLVGQRVTLENQIRGLAVVFGVRLPRGLS
                     PAFAEQAISSSEGIAGLSGAMRGLLAARNAVLKAIAAIDGDLKRLARSSEACRRLMTI
                     PGVGQLTALAFIAAIDEPQRFRRSRDVGAYLGLVPRRYQSGEIDYTGSISKCGDRRVR
                     TLLYEAANVMLTRYKPPLKLKDWALAIAKRSTMRKARIALARRLAIIMHAMLRHGTEF
                     KTA"
BASE COUNT          275 a          483 c          451 g          310 t
ORIGIN      
        1 ggtcaagggg cggctgctcg gatcctgagc ggttttgtgc ctccgttctc tacgtgctcg
       61 atggcacttg atggggtcag ctgggtgtgg ggcggcttgg ttgaaatcgc agtcagccga
      121 ttggatcgac cgcatgcttc agaattggcg ccgtcatcca ctccctccct cgggcagcgc
      181 tccgctcggg agcttgtctc ggcctcttgt ctccttccgc gttgatccta ggcggttttg
      241 aattcggtac cgtgccgaag catggcgtgc atgatgatcg cgagccggcg cgcgagcgcg
      301 atccgcgcct tacgcatcgt tgagcgcttc gcgatggcaa gcgcccagtc cttcagtttc
      361 agtgggggtt tgtagcgcgt cagcattaca ttggccgcct cataaagcag ggtgcggacg
      421 cggcggtcgc cgcattttga gatactgccg gtatagtcga tctcgcccga ctggtagcgc
      481 ctgggcacca agcccagata tgcgccgacg tcgcgcgatc tccggaagcg ttgcggctcg
      541 tcgatggcgg cgatgaaggc aagagcagtg agctgcccga cgccaggtat cgtcatcagc
      601 cttctgcaag cctccgatga gcgggcgaga cgctttaggt cgccatcgat cgcggcgatc
      661 gctttgagca cagcgttgcg cgcggcgagc agcccacgca tcgcaccaga cagccccgcg
      721 atgccttcgc tgctgctgat agcctgttcc gcgaatgccg gactaagtcc gcgcgggagc
      781 cggacaccga acacaacggc caggccgcgt atctggttct cgagcgtgac gcgctgtccg
      841 acgagcttct tgcgtgcgat gatcagcgcc cgaacggcat gggccggaag cgacttcaca
      901 tggacgggtt tgaagaagcc agtccgggca agatgtgcca acccacgcgc atcgttacgg
      961 tcggtcttgt gcgtccccag cgacttcagc gcctgatagg cttgccggct ctcgatgcag
     1021 gtgaccggca gccccagcgc atcaagaccg tgatacagcg tcggcgccat gcgccccgtc
     1081 tcgaatacga tctgctgaca cttcggtgct ttcgtcagtc ccgccgcgat tgcctcggcg
     1141 gagctgctcg ctcttgtctc cagaactatc ccaccgttac ggtcgacaac gcagatatgc
     1201 gtttcgtcca tcgatacgtc caacccagca aaatactcca tcgctgctct cctcctcgaa
     1261 tcagtgagcc gacactatcg gccccttcga agagcagccg tcccattacc caatgttgaa
     1321 aaactccctc cgagcctcaa tccgaaaatt ttctggcgtt gtgagccgcc caggagactc
     1381 aatcaatagc gcgcgtcttc ggccccgtcg ggacaagtgc ccccactaaa agctcttctg
     1441 gagtcgtagc gagatcacac gcccatagag gttgaacagc agatcgcagg cacacggatt
     1501 accgccgccg gtgctgatg
//
LOCUS       DATDHO010000345         2874 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_459866, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000345 DATDHO010000000
VERSION     DATDHO010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2874
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_459866"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..165)
                     /locus_tag="VIY07_06625"
     tRNA            complement(89..165)
                     /locus_tag="VIY07_06625"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(129..131),aa:Pro,seq:tgg)
     gene            complement(231..641)
                     /locus_tag="VIY07_06630"
     CDS             complement(231..641)
                     /locus_tag="VIY07_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HEY6381465.1"
                     /translation="MAFAVPVWPAGKQTLEIASKSGVHVFSVEIADNDAERAKGLMYR
                     KDLPEGQGMLFDFHREQEVSFWMQNTYIPLDMVFIRADGRILRIAENTEPLSTKLIPS
                     GGPVRAVLEVIGGTTRKLGIAPGDRVASPIFSAR"
     gene            complement(738..1313)
                     /locus_tag="VIY07_06635"
     CDS             complement(738..1313)
                     /locus_tag="VIY07_06635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEY6381466.1"
                     /translation="MSGANLRPGAVRELVDDTATNLIELTGVIKWFDVAKGFGFIVPD
                     NGMPDILLHVTCLRRDGYQTAYEGARVLCEVLQRPKGLQAFRILSMDESTAVHPAQMP
                     PARTHVTVTPTSGLERAQVKWFNRLRGFGFLTRGEGTPDIFVHMETLRRYGIAELRPG
                     QTVLVRFGPGPKGLMAAEVRPDGGPLGLASH"
     gene            complement(1484..2245)
                     /locus_tag="VIY07_06640"
     CDS             complement(1484..2245)
                     /locus_tag="VIY07_06640"
                     /EC_number="2.3.1.286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HEY6381467.1"
                     /translation="MMASDLTTAIARLRDLIDDASVIVPFTGAGISTECGIPDFRSPG
                     GLWTRNQPIPFDAFVSSQEMRDEAWRRRFAMEEKFAQAKPGRGHRALASLYRSGKSPG
                     LITQNIDNLHQASGIDAGDVIELHGNTTYALCLDCLRRYELSWVKEKFEAAGQRAPDC
                     ACGGYIKTATVSFGQAMPPEAMERAEDLTKSCDLFLAVGSSLVVWPAAGFPLMAKRNG
                     AVLVIINREATEFDDIADLVVRNDIGDTLGPFITV"
     gene            2287..2742
                     /locus_tag="VIY07_06645"
     CDS             2287..2742
                     /locus_tag="VIY07_06645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6381468.1"
                     /translation="MRYLHTMLRVRDLDAALDFYCNKLGLKETRRRVDEKNRYTLVFL
                     AGPKDENLVEESKKSGRPGPEVELTYNWDTEDYGEARHFGHLAFEVDDIYATCERLMK
                     AGVTINRPPRDGVMAFVRSPDKHSIELLQKGAAKPPQEPWKSMANTGKW"
BASE COUNT          618 a          868 c          821 g          567 t
ORIGIN      
        1 gtgccatggg ttactccacg gtcactgtcc caatactcga gcaacgttgg cctcgtcgga
       61 agttggaagc taaaatgcgt ggggtaaatg gtcggggcag caggatttga acctgcgacc
      121 ttctggtccc aaaccagacg cgctaccaga ctgcgctatg ccccgccgga caccggcgtt
      181 cgatacacac ttcggtgcga tgcggcaagc aagcctggcc ggggttgagc tcagcgggcg
      241 ctgaaaatcg gtgaggcaac gcggtcgcct ggagcaattc cgagctttcg cgtcgtgccg
      301 ccgatgactt ctaatactgc gcgcaccggc cctcccgatg ggataagctt ggttgacagc
      361 ggttccgtgt tttccgcaat gcgaagaatc cgcccatcgg cgcggataaa caccatgtcg
      421 agtggaatat aggtgttttg catccagaag ctgacttcct gttcgcgatg gaagtcgaac
      481 aacatgccct gcccttccgg caaatccttg cggtacatca ggcctttcgc ccgttccgca
      541 tcattgtcag caatctcgac tgaaaagacg tgaaccccgc tcttgctggc gatctcgagc
      601 gtctgcttcc ccgccggcca gaccgggacg gcaaaagcca ttataccgac gagaacgaaa
      661 acgaatgacc ttatggcgcg catgggcacg cctttacgcg gcctcgctcg ccgcagcaat
      721 cgcaaaatcg aggactttta gtgggaggct agtcccagcg ggccaccgtc gggccggacc
      781 tccgcggcca tgaggccttt tggtccgggc ccaaaccgca ccaggactgt ctggcctgga
      841 cgcagctccg caatgccgta gcggcgcagg gtttccatgt gaacgaagat gtcaggcgtt
      901 ccttcgccgc gcgtcaggaa gccaaaccca cgcaggcggt tgaaccattt gacctgggcg
      961 cgctccagcc cgctcgtcgg cgtgaccgta acatgcgtgc gcgccggcgg catctgcgcg
     1021 ggatgcaccg cagtcgattc atccatcgac agaattcgga aggcctgaag cccttttgga
     1081 cgctgcagca cctcgcagag cacgcgggcg ccctcgtagg ctgtttgata gccgtcgcgc
     1141 cggagacagg tcacgtgcaa aaggatatcg ggcatcccat tgtcagggac aatgaatccg
     1201 aatccttttg cgacatcgaa ccatttaatg acgccagtca gctcgatgag attagtcgcc
     1261 gtgtcgtcga cgagttctct gaccgcccct ggccggagat ttgccccaga catttttgat
     1321 tcgatcccgt ccgacgccat gacgccgtac actgccgctg tctggcgcct cttacgggcg
     1381 cttgaacgaa tctttgtgga atcgaagata acaccagccc tcaaagccga aagcgcaaaa
     1441 tgggcttgca cacagctcta tacacagcgc agctgagggc gaatcagacg gtaatgaaag
     1501 gaccgagcgt gtcaccgatg tcgtttcgca cgaccagatc ggcaatatcg tcgaactcgg
     1561 tggcctcgcg attgatgatg acgagcaccg cgccattgcg cttggccatc agagggaaac
     1621 ccgccgccgg ccacacaacc agcgaggaac cgacggctag aaacagatca cagcttttgg
     1681 tcaagtcctc ggcgcgctcc attgcttcag gtggcatcgc ctgtccgaac gacactgtcg
     1741 ctgtcttgat gtaaccgccg catgcgcaat cgggtgcgcg ctggcctgct gcttcgaatt
     1801 tttctttgac ccaggacaac tcatagcgcc ttaagcaatc gagacacagc gcgtaggtgg
     1861 tgttgccatg cagctcgatg acatcgccgg catcgattcc agaggcttga tgtaaattgt
     1921 cgatattctg cgtgataagg ccgggacttt tgcctgaacg atacagactc gccagcgctc
     1981 gatgcccacg gcccggcttg gcctgagcga acttttcctc catagcgaaa cgacgccgcc
     2041 aagcctcgtc gcgcatctcc tggctcgaca caaacgcatc gaacgggatc ggctgattcc
     2101 tggtccacaa ccctccgggc gaacgaaagt ccgggatgcc gcattcggta gaaattcccg
     2161 ccccggtaaa cgggacgatt acggaggcat cgtcaatgag atcccgcagg cgagcgattg
     2221 cggtcgtaag atcggaggcc atcattatgt atactgagtt ccctatcagc cagtgaggtt
     2281 tagcctatgc gatatcttca cactatgctg cgcgtccgtg atctcgatgc ggcgctcgat
     2341 ttttattgca acaagcttgg gttaaaggaa acccgccgcc gggtggacga gaagaaccgc
     2401 tacacgctgg ttttcctggc aggcccaaaa gacgaaaacc tcgtcgaaga aagcaagaaa
     2461 tccggccgcc cgggccccga ggtggaactc acatacaatt gggataccga agactacggc
     2521 gaggcgcgcc actttggcca cctcgcattc gaggtggacg atatctacgc gacctgcgag
     2581 cggcttatga aggctggggt gaccattaat cggcctccgc gcgatggtgt gatggccttc
     2641 gtgcggtccc ccgacaagca ttcgatcgaa ttgctgcaga aaggcgcggc caaaccgccc
     2701 caggagccct ggaaatcgat ggcaaacacc gggaaatggt agcggctgtt cgcttgccgc
     2761 tggcagcgaa ggcctttata tcccaccacc tgcatcagtg cctgaccgga acaggttacg
     2821 gcagcgcttc tgcgcccttc gtctagaggc ctaggacatc gccctttcac ggcg
//
LOCUS       DATDHO010000346         7018 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_362567, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000346 DATDHO010000000
VERSION     DATDHO010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7018
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362567"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..517)
                     /locus_tag="VIY07_06650"
     CDS             complement(<1..517)
                     /locus_tag="VIY07_06650"
                     /inference="COORDINATES: protein motif:HMM:NF024798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEY6381469.1"
                     /translation="MPKKSLALALLALASSLSGEALGSHCRNTGSYERWLEDFKKEAA
                     AQGISPRVIAAAAPSMTFDPAIIRRDHGQAVFNQTFLQFSDRMVGGGRIPTGLAKIKQ
                     HAALFARIEQKYGVPAPVLTAFWGLESDYGATFGKYNILSATASLAYDCRRPDFFRQQ
                     LFDALRIIERGD"
     gene            complement(596..1315)
                     /locus_tag="VIY07_06655"
     CDS             complement(596..1315)
                     /locus_tag="VIY07_06655"
                     /inference="COORDINATES: protein motif:HMM:NF022515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2865 domain-containing protein"
                     /protein_id="HEY6381470.1"
                     /translation="MLCGGDEGLSRSALGIACLVVALSFSAPASAGFLERLFGAFRHS
                     HHAPRAPAVMQPFADPSGDFPMAREVGPAVGYCVRSCDGHYFPVNAQPGLSAAEACRS
                     FCPAARTQVYSGGSIDTAIAANGGRYADLANAYLYRKQAVAGCSCNGRDTFGLARIDA
                     KSDPTLRPGDIVATENGFVAFTGGRNQAAFTPVKVYHGLSRRERGKVSELKVSRSAGR
                     TATTPSTSLQKTDDRSAQLEK"
     gene            1540..2019
                     /locus_tag="VIY07_06660"
     CDS             1540..2019
                     /locus_tag="VIY07_06660"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY6381471.1"
                     /translation="MASNVRFSNPKTLAKPPGYSYVVEATGPNRLIFIAGQLGLDMEN
                     KLVGAPGDFRAQAEKAVENLELALADAGATLKDVVKINNYLVDMSHLSIFREVRDKHF
                     NMSAPPASTTVAISQLARPGALFEIEAIAVLPAKAAKATRAAARRGGRKVKARRRRR"
     gene            complement(2052..5087)
                     /gene="polA"
                     /locus_tag="VIY07_06665"
     CDS             complement(2052..5087)
                     /gene="polA"
                     /locus_tag="VIY07_06665"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEY6381472.1"
                     /translation="MPAPAKSSPRPKTAPPPVPGKIAPRPLKKGDHLFLVDGSGYIFR
                     AYHAIRFEPRTPDGTHVNAVYGFCNMLWKLLKEMKPEERPTHLAVVFDKSEQTFRTEM
                     FKEYKAHRPPPPDDLIPQFPLIREAVRAFEIPCLEQAGYEADDLIATYARMACEAGAT
                     ATIVSSDKDLMQLVNDCVIMYDTMKDVRIGIPEVIEKFGVPPAKVIEVQALIGDSTDN
                     VPGVPGIGVKTAAQLIVEYGDLETLLQRAGEIKQEKRRQALIDNAEAARISKKLVTLD
                     DRVPLEVPVDNLGVNEPDYRTLITFLKAMGFKTLMQRVAEKGGVDASQIESTSTTAAG
                     SGRAADAMPVPSGRTGGQGQLPLGAPPRKAAAGATPGSSPLTPISLAERRLEALRATR
                     LDAAKYETITTLERLRHWIDRAHDTGLLALKAETTGLDPMQTALCGLALAVAPNEAAY
                     LPLGHREANEGETTGLFAAKLSAGQIAEQQALDALKSVLEDECVVKIGHDVKRDWLIL
                     ARRGIRLGATDDTMLMSYVLDAGKGSHDMDSVATRYFGRSPSRFNDMKNKDKALFTPE
                     ATPIARTAAYAAEDADVTLRLWQALKPRMAAEKVTRVYETLERPMPRVLACMEERGIS
                     VNPAVLSQLSNDFGKKQSVLEQEINRIAGTQVNPGSPKQLGDILFGQMGLPGGTKTKT
                     GQWSTGARTLEELAEQGHKLPQVILDWRQVSKLRSTYTEALPNYVNPKTHRVHTSYAL
                     ASTSTGRLSSSEPNLQNIPIRTEDGRKIRRAFVAAPGKKLVSADYSQIELRLLSEVAN
                     VPTLRKAFQDGVDIHAMTASEMFGVPVKDMPPDIRRRAKAINFGIIYGISAFGLAAQL
                     GIDGKEAGAYIKKYFERFPGIRDYMDETREFCREHGYVLTLFGRKCHYPDIRASNPSI
                     RSFNERAAINARLQGSAADIIRRAMIRIEPELKKDKLTAQMLLQVHDELIFEVPEDEI
                     ERTIPIIKSVMQSAPDPAVVLHVPLQVDARAADNWDEAH"
     gene            5248..6558
                     /locus_tag="VIY07_06670"
     CDS             5248..6558
                     /locus_tag="VIY07_06670"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HEY6381473.1"
                     /translation="MRVAMIGTGYVGLVSGACFADFGHEVICVDKDKAKIAALLRGEM
                     PIYEPGLNDMVGANMRAARLKFTSELAAAVADADAVFIAVGTPSRRGDGFADLSFVYD
                     AAREIARALDGYTVVITKSTVPVGTGDEVERIIQETRPDVACAVVSNPEFLREGAAIR
                     DFKHPDRIVIGTTDARARELMSELYRPLYLNRSPIMFTDRRTAELIKYAANAFLATKI
                     TFINEIADLAEKVGADVQEVARGMGLDNRIGSKFLHAGPGFGGSCFPKDTVALIKTAQ
                     DHASPLRIVEAVAAVNDARKRAMARKVSAALGGELRGKTVAVLGLTFKPNTDDMREAP
                     SIPLITALQDLGAKVRAYDPAGMEQAKSVIANVTFCGDAYSCAEGASVLVIVTEWEQF
                     RALDFDRLKTVMAQPIVVDLRNVYRAEEIVRQGFVYESVGRPRK"
     gene            6681..>7018
                     /locus_tag="VIY07_06675"
     CDS             6681..>7018
                     /locus_tag="VIY07_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HEY6381474.1"
                     /translation="MARTFETPLPIDSALPDVAAALSTNNAAVLVAPPGAGKTTRVPL
                     ALLDEAWATNRKILVLEPRRLAARAAAVRMASTLDEEVGDTVGLRVRFGSKISRRTRI
                     EVVTEGVFTRL"
BASE COUNT         1339 a         2105 c         2178 g         1396 t
ORIGIN      
        1 gatcgccgcg ctcgatgata cgcagtgcat cgaaaagctg ctggcgaaag aaatcggggc
       61 gccggcagtc ataggcgagc gacgctgtag cgctcaagat attgtactta ccgaaggtcg
      121 cgccgtagtc gctctcgaga ccccaaaacg cggtcaggac cggagcaggc acgccgtact
      181 tctgctcgat gcgtgcaaac agggccgcat gctgcttgat cttggcaagt cccgttggaa
      241 ttcggccgcc gccgaccatg cgatccgaga attgcaggaa ggtctgattg aacacggcct
      301 gaccgtggtc gcggcggatg atcgcagggt cgaaagtcat gcttggcgcc gcggcggcaa
      361 tcacacgcgg cgaaatgccc tgcgcagccg cctctttctt gaagtcctcc agccagcgct
      421 cgtagctgcc ggtattgcgg cagtgggagc ccaaggcttc gccagaaagg ctcgacgcga
      481 gtgcaagcaa tgccagtgcc aggctctttt tcggcatcgt ccccgtccgc tggtgattcg
      541 tgaggtgaaa tttgcccgtt accccgtcgg ggtcaagcga gactgcacag caaaattatt
      601 tttcgagttg ggcgctgcgg tcgtccgttt tttggagact ggtcgagggc gtcgtcgccg
      661 tccgtccagc ggacctcgac accttcaatt ccgacacttt gccgcgttcg cgccgcgaaa
      721 ggccgtgata gaccttgacc ggcgtgaagg cagcctggtt cctgccgcca gtaaaagcga
      781 cgaaaccgtt ttcggttgcg acaatatcgc caggccggag cgtcgggtcg ctctttgcat
      841 caattcgggc aaggccgaag gtatcacgac cattgcatga gcagcctgcc accgcctgct
      901 tgcgatagag ataggcattg gcaaggtctg catagcggcc gccatttgcg gcgatagccg
      961 tgtcgatgct gccgccggaa tacacttgag ttctggccgc ggggcagaac gagcgacacg
     1021 cttcagccgc gctcaatccc ggctgagcgt ttacaggaaa gtagtggccg tcgcagctcc
     1081 gcacgcaata accaaccgct gggccaacct ctcgcgccat cggaaaatcg ccggatggat
     1141 ccgcgaaagg ctgcatgacg gccggcgcgc gcggcgcgtg gtgtgagtgg cgaaatgcgc
     1201 cgaaaaggcg ctccagaaaa cccgcggagg ccggtgccga gaaactcagc gctacgacaa
     1261 gacacgcgat cccaagcgcc gaacgcgata agccctcgtc accaccgcac aacatagttg
     1321 cctccgcact cttgtgagcg cgagaaaaca acgtttatac gaacggaaag ttgcgccagt
     1381 cggcgctttt gcggtgcgtg tcacgccttg tcatatggca gcgcgtcggg cagcatttcg
     1441 cgcgtttgct gcgacaaaac gataagcaaa agcggtgaag cttcgtccga gacgaggaaa
     1501 ggctgatttc agttcgacca gatttaaagg agggtaccaa tggcctcgaa tgtccgcttc
     1561 tcaaacccca aaacgctcgc caagccgcca ggctacagct acgtcgtcga ggccaccggg
     1621 cccaaccggc tgattttcat tgccgggcaa ctggggctcg atatggaaaa caagctggtc
     1681 ggcgcaccag gcgattttcg cgcccaggct gagaaggcag tcgaaaacct ggagctcgcg
     1741 cttgccgacg ccggagcgac gcttaaggac gtggtgaaga tcaacaacta cctcgtcgac
     1801 atgtcccacc tctcgatctt ccgcgaggta cgcgataagc acttcaacat gtcagcgccg
     1861 ccggcgagca cgacagtcgc catctcgcag ctggcgcggc ccggcgcctt gttcgagatc
     1921 gaggctatcg cggtgctacc ggcaaaagcc gcgaaagcga caagggccgc tgcgcgacga
     1981 ggcgggagaa aggtcaaggc acggcgtcgc cgcaggtgag cggcagcaac aggggcagat
     2041 gaaagcaagc gctagtgcgc ttcatcccag ttgtctgcag cgcgcgcatc gacctgtaac
     2101 ggcacatgca atacgacggc aggatcggga gcgctctgca tcacgctctt gatgatggga
     2161 attgtgcgct cgatctcgtc ttctggcacc tcgaagatga gctcgtcgtg cacctgcagc
     2221 aacatctgcg cggttaactt gtctttcttc agctccggct cgatgcgaat catggcgcgg
     2281 cggataatat cggcggccga gccctgcaag cgcgcattga tggcggcgcg ttcgttgaag
     2341 gagcggatcg acggattgct ggctcggata tccgggtagt ggcacttgcg gccaaacaag
     2401 gtgagcacgt agccatgctc gcggcagaac tcgcgtgttt cgtccatata gtcgcgaatc
     2461 cccgggaagc gctcaaaata tttcttgata tatgccccgg cttccttgcc atcgatcccg
     2521 agctgcgcgg cgagcccaaa tgccgaaatg ccgtagatga tgccgaaatt gatcgccttg
     2581 gctcgtcggc ggatgtcggg cggcatgtcc ttgactggaa cgccgaacat ctcggacgcg
     2641 gtcattgcgt gaatatcgac gccatcctgg aacgccttgc ggagcgtggg gacattggcg
     2701 acttcggaca aaagccgaag ttcaatttgc gagtagtccg ccgacacaag ttttttgccc
     2761 ggcgctgcaa cgaaggctcg gcgaatcttg cggccgtcct ctgtgcggat cgggatgttt
     2821 tgcaaattcg gttctgacga cgacaaccgg ccggtcgagg tagacgcgag cgcgtaactc
     2881 gtatggacgc gatgagtttt cgggttgacg tagttcggca gtgcctcggt ataggtcgag
     2941 cgcagctttg acacctgccg ccaatcgaga atcacctgcg gaagcttgtg cccctgctca
     3001 gctagctcct cgagtgtgcg cgcgccggtc gaccattgcc cggttttggt tttggttccg
     3061 ccgggcaatc ccatctgtcc gaacaggatg tcgcccaact gcttcgggct gcccggattg
     3121 acctgcgtgc cggcaatcct gttgatttcc tgttcgagca cactctgttt cttgccgaag
     3181 tcgttggaga gctgcgacag cacggctggg ttgaccgaaa tgccgcgctc ctccatgcac
     3241 gcgagaacgc gcggcatggg ccgttccaga gtctcgtaca cgcgggtaac tttttcggca
     3301 gccatccgcg gcttcaacgc ctgccagagg cgcagcgtca catcggcatc ctcagcggca
     3361 tacgcggcgg tgcgcgcgat cggcgtcgct tccggggtga aaagcgcctt gtccttgttc
     3421 ttcatatcgt tgaagcgcga cgggctgcgc ccgaaataac gggtcgcaac actgtccatg
     3481 tcgtgcgagc ccttgccagc atcgagcacg taggacatca acatcgtatc gtccgttgcg
     3541 cccagccgga ttcctcggcg cgccaggatc agccaatccc gtttcacatc gtgtccgatc
     3601 ttgacgacac attcgtcttc gagaacggac ttcaatgcat caagggcctg ttgctcggcg
     3661 atctgtccgg cgctgagttt cgccgcgaac agtcctgtcg tctcgccctc gttggcctcg
     3721 cggtggccga gcggcaaata cgcggcttcg ttcggcgcga cggcaagggc caggccgcac
     3781 agcgcggttt gcatcgggtc gaggccggtg gtttcggcct tgagggccaa taaaccggta
     3841 tcgtgggccc ggtcgatcca atgtcgaagg cgctcgaggg ttgtgatcgt ttcgtacttc
     3901 gcagcgtcga gcctggtcgc ccgcaacgcc tccagtcgcc gctcggcgag agagatcggc
     3961 gtaagcgggg aggaaccggg agtcgcgcct gctgcggcct tgcgcggagg cgcgccgagc
     4021 ggcagttggc cttgtcctcc ggtgcggccc gacggaacgg gcatggcatc cgccgctctg
     4081 ccagagccgg ccgccgtcgt ggatgtcgat tcgatctgac tcgcatcgac gccgcccttt
     4141 tccgcgacgc gttgcatcag cgtcttgaac cccatcgctt tgagaaaggt gatcagcgtc
     4201 ctgtaatcgg gttcgttcac gccaaggttg tcaaccggca cttcgagcgg cacccgatca
     4261 tcaagcgtca caagcttctt cgaaattcgc gcagcttcgg cgttgtcaat gagcgcctgg
     4321 cggcgcttct cctgcttgat ctcgccggcc ctctgcagaa gtgtttccag atcgccatat
     4381 tcgacgatca gctgcgccgc agtctttacg ccaatgccgg ggacgccggg cacattgtcc
     4441 gtcgaatcgc caatgagcgc ctgcacctcg atgacctttg ccggcggcac gccgaatttc
     4501 tcgatcactt caggaatgcc gatacggaca tccttcatcg tgtcgtacat gatgacgcag
     4561 tcattcacga gctgcatgag atccttgtcg gacgacacaa tggtggctgt cgcgccggcc
     4621 tcgcaggcca tgcgtgcgta cgttgcgatc aggtcatcgg cttcgtaacc ggcttgctcg
     4681 aggcatggaa tctcgaaagc ccgcacggct tcgcggatca gcggaaactg cggaatgagg
     4741 tcgtcgggcg ggggcggtcg gtgagccttg tactccttga acatctctgt gcggaaggtc
     4801 tgctccgact tgtcgaagac aaccgcgaga tgcgtcggcc gctcttcggg cttcatctcc
     4861 ttgagaagct tccacagcat gttgcagaag ccgtagacgg cgttgacatg cgtgccgtcc
     4921 ggagtccgcg gctcgaacct gatcgcgtga taggcgcgaa agatgtagcc ggagccgtct
     4981 accaggaaca gatgatcgcc tttcttcagc ggccgcggag cgatttttcc cggaacaggc
     5041 ggaggcgcgg ttttcggtct ggggcttgat tttgcgggcg ctggcatggg ccgaatgtgg
     5101 ggccggatgc ggcgttaatc aatcggccaa aaatgccggg ccacagaaaa tggccggtgt
     5161 cctggggctc tcgccactgc gaatggcgtc tgctattcag acgccattcg gctttgaccg
     5221 gttcgtcatc ttcatgatgg atttcacatg cgcgttgcca tgatcggcac cggctacgtt
     5281 ggccttgttt ccggcgcctg cttcgccgat ttcggccacg aggtcatttg cgtcgacaag
     5341 gataaagcga aaatcgctgc ccttctgcgg ggcgaaatgc cgatttacga acccgggctc
     5401 aatgacatgg ttggcgccaa tatgcgcgcc gcccggctga aattcaccag cgagcttgcg
     5461 gccgcagtcg cggatgccga cgcggtcttc atcgcggttg gaactccctc gcgtcgcggc
     5521 gacggcttcg ctgatctgag cttcgtctat gacgccgcgc gcgagatcgc gcgagcgctc
     5581 gatggctata ccgttgtgat cacaaaatcg accgtgccgg ttggtaccgg tgacgaggtt
     5641 gaacgcatca tccaagagac gcggccggac gtcgcctgcg cagtggtgtc gaaccccgag
     5701 ttcctgcgcg aaggggcagc gatccgggat ttcaagcatc ccgaccggat cgtgatcggc
     5761 actaccgacg cgcgggcgcg cgaattgatg agcgaactgt accggccgct ctacttgaac
     5821 cgctcgccga tcatgttcac cgaccgacgc accgccgaat tgatcaaata cgcagccaat
     5881 gcatttctgg ccaccaagat caccttcatc aacgagattg ccgatctcgc ggaaaaagtc
     5941 ggagccgacg tgcaggaggt cgcgcgcgga atggggctgg acaaccggat cggctcgaag
     6001 ttcttgcacg ccggcccggg ctttggcggg tcctgctttc cgaaggacac ggttgcgctg
     6061 atcaagaccg cacaagacca tgcctcgccg ttgcgcatcg tcgaggcggt tgcggcggtc
     6121 aacgacgcgc gcaagcgcgc gatggcccgc aaggtatccg cggcgctcgg aggcgagctg
     6181 cgcggcaaaa cggtcgctgt cctcggcctg acattcaagc ccaacactga cgatatgcgc
     6241 gaagcgccgt cgattccgct catcacggcg ctgcaggacc tgggcgccaa ggtacgtgcc
     6301 tatgatccgg ccggcatgga acaggccaag agcgtcattg ccaacgttac cttctgcggc
     6361 gatgcctaca gctgtgccga gggcgcctct gttctggtca tcgtcaccga atgggagcag
     6421 tttcgcgcgc tcgattttga tcggctgaag accgtgatgg cgcagccgat tgttgtcgat
     6481 ctgcgcaatg tgtatcgcgc tgaagaaatt gtccggcagg gctttgttta tgaaagcgta
     6541 ggacggccgc gaaaatgatt ttttacagaa gttgtcacgc cccgcggaag cggggcagcc
     6601 agtaacctcc gaactcgatt tcaatcgcat catgtgttta ctggattatc cgctcgcgcg
     6661 ggtagtgaca ggccgtaacc gtggcacgaa ccttcgaaac accgctcccg atagactccg
     6721 cactgccgga tgtcgccgca gcgctgtcca ccaacaatgc cgccgtcctg gtcgctccgc
     6781 cgggtgccgg caagacgacc cgcgtgcccc tggccctgct tgatgaagca tgggctacga
     6841 acaggaaaat tcttgtgctt gaaccgcggc gcctcgcggc gcgtgcggcg gccgtgcgca
     6901 tggcatcgac attggacgag gaggttggcg atacggttgg cctgcgcgtg cgcttcggct
     6961 caaaaatttc gaggcgcacg cgcatcgagg tggttaccga gggcgtgttc acgcgtct
//
LOCUS       DATDHO010000347         6216 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_16638, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000347 DATDHO010000000
VERSION     DATDHO010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6216)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6216)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6216
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16638"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(127..1545)
                     /gene="lpdA"
                     /locus_tag="VIY07_06680"
     CDS             complement(127..1545)
                     /gene="lpdA"
                     /locus_tag="VIY07_06680"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEY6381475.1"
                     /translation="MADSSFDVLIIGAGPGGYVTAIRASQLGYKTAIIERDYLGGICL
                     NWGCIPTKALLRSAEIFHYFQHAKDYGLKADNVGYDAKGVVARSRAVSKRLNDGVGFL
                     MKKNKVSVIWGEASIDAPGKVTVKASKSEAPKGALGAGSYQAKHIIIATGARPRVLPG
                     IEPDKKLVWTYFEAMVPDRVPKSLLVIGSGAIGIEFASFYRTLGSEVTVVEVLPQILP
                     VEDHDIQTFARKSFEKQGIKIHTNAKITKLDKKGDSVVATMEEGGKTQTITVERVISA
                     VGVVGNIENLGLEKLGVKTDRGTILVDEYNKTNVPGIYAIGDVSGPPMLAHKAEHEGV
                     VCVEAIKGLHPHPMNKLMIPGCTYCSPQIASVGLTEQAAKEKKLDIRVGRFPFIGNGK
                     AIALGEDQGLVKVIFDKKTGQLLGAHMVGAEVTELIQGYVVAMNLETTEEELMHTVFP
                     HPTLSEMMKEAVLDAYGRVLNI"
     gene            complement(1571..2929)
                     /locus_tag="VIY07_06685"
     CDS             complement(1571..2929)
                     /locus_tag="VIY07_06685"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex dihydrolipoamide
                     acetyltransferase"
                     /protein_id="HEY6381476.1"
                     /translation="MPTNILMPALSPTMEKGNLARWLKKEGDKIKSGDVIAEIETDKA
                     TMEYEAIEDGTLAKIVVPEGTQDVAVNSVIAVLAGEGEDVKAAASAAKSAPPQKTAEK
                     KGEPIAAAPQPSPQKPAEAPGAAPRPQRPSPPTVEAVPATRGNRIFSSPLARRLAKEA
                     NIDLNRVQGSGPHGRIIARDIEQAKSGKGLRAPSAAPAGGAVIAPAMSDAQVRALFAD
                     GSYELIPHDNMRRTIAQRLTASIQTIPHFYETMDCDIGRLTAAREEINAAVPKGKDGK
                     PAYKLSVNDFVIKALAVALQRIPDANVSWTEAGLLKHKHSDIGVAVALPGGLITPIVR
                     HAESKSLSAISNEMRDLAARARERKLKPNEYQGGTSSVSNLGMYGIKDFTAVINPPQS
                     TILAVGAGEERAVVRNGQLAVATIMSVTLSCDHRAIDGALGAELIREFKTLVENPVMM
                     VV"
     gene            complement(2949..3242)
                     /locus_tag="VIY07_06690"
     CDS             complement(2949..3242)
                     /locus_tag="VIY07_06690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5076 domain-containing protein"
                     /protein_id="HEY6381477.1"
                     /translation="MSLSFNALNAPPAALEKGGDEVLRAAVVEGALHVSLIRAFDDPG
                     LWGVALADITRHVARIYATEHNIPERKVIDHIRMAFDGELDTPTDLGVTSAIS"
     gene            complement(3251..4663)
                     /locus_tag="VIY07_06695"
     CDS             complement(3251..4663)
                     /locus_tag="VIY07_06695"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HEY6381478.1"
                     /translation="MPTEVLMPALSPTMEKGNLAKWLKKEGDKIKSGDVIAEIETDKA
                     TMEVEAADEGTLGKILVPEGTADVAVNTPIAVILGEGEDKAAIKATKPSQQQKAAESA
                     PPVQAQKQEAKVQEAPAPKPSKAPEAPVQHIASDPDIPEGTEMVTMTMREALRDAMAE
                     EMRRDKGVFVMGEEVAEYQGAYKVTQGLLQEFGANRVIDTPITEHGFAGLGIGAGLAG
                     LKPIVEFMTFNFAMQALDQIINSAAKTLYMSGGQMGCQIVFRGPNGAAARVAAQHSQD
                     YSAWYSHIPGLKVIAPSTAADAKGLLKAAIRDPNPVIFLENEILYGHSSPVPKLDDFV
                     LPIGKAKIVRPGNDVTIVSWAMGMTYALKAAEELANEGIDAEVIDLRTIRPMDTETII
                     ASVQKTGRVVTVEEGWQQSGVGAEIAARIMEHAFDYLDAPVARVAGKDVPMPYAANLE
                     KLALPSVAEVVEAAKLVCYA"
     gene            complement(4694..5704)
                     /gene="pdhA"
                     /locus_tag="VIY07_06700"
     CDS             complement(4694..5704)
                     /gene="pdhA"
                     /locus_tag="VIY07_06700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011580968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEY6381479.1"
                     /translation="MAVAQKTPTPEPKVVITEFSKEEELSAYRTMLTIRRFEEKAGQM
                     YGMGLIGGFCHLYIGQEAVVVGMQMTLKPGDQVITGYRDHGHMIATGMDLKGIMAELT
                     GRAHGYSKGKGGSMHMFSVEKGFYGGHGIVGAQVPLGTGLAFADRYRGTDNLSLTYFG
                     DGAANQGQVYESFNMASLWKLPVIYVIENNRYAMGTAITRSHAEVNLSRRGLSFNIPG
                     DQVDGMDVRAVKAAGEKAAQWCRTGKGPYILEMLTYRYRGHSMSDPAKYRTREEVDEI
                     RTHHDPIDMARQRILEKKFANEEALKKIDAEVRDQVNQAAEFATHDPEPDVSELYTDV
                     YR"
     gene            complement(5890..>6216)
                     /locus_tag="VIY07_06705"
     CDS             complement(5890..>6216)
                     /locus_tag="VIY07_06705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEY6381480.1"
                     /translation="LPAMVTHRRRRTILTVLGLYVFAALFIGYFAANAFTGNHGLRAQ
                     QDLEQQLAVMKSELTELKAERAHWERRVSLLRADRIDPDMLDERVRALIGYVDRRDLT
                     LLLNPR"
BASE COUNT         1145 a         1900 c         1788 g         1383 t
ORIGIN      
        1 tggcaaacag cgaatcgtgg acattgaccg agccaaatcc gtctgtacgg acctggactg
       61 acgattattc gaatgtcgcc ggcgcgatct ggcgcaaata tgtcaggtga gctgtctaac
      121 ctgaccctag atgttcagca cacggccata tgcgtcgagc accgcttcct tcatcatttc
      181 agacaaggtc ggatgcggga agaccgtatg catcagctct tcctcggtgg tctcgaggtt
      241 catcgcgacc acatagccct ggatcaactc ggtcacttcg gcgccgacca tgtgggcgcc
      301 aagcagctgg ccggttttct tgtcgaagat aaccttcacc aggccttgat cttcgcccag
      361 cgcaatggcc ttgccgttgc cgatgaaagg aaagcggccg acacgaatgt cgagcttctt
      421 ttccttggcg gcctgctctg tcaggccgac cgaggcaatt tgcggggagc aataggtgca
      481 gcccggaatc atcaatttgt tcatcggatg cggatgcaat cccttgattg cttcgacgca
      541 aaccacgcct tcgtgctcgg ccttgtgcgc cagcatcggc gggcccgaga cgtcgccgat
      601 ggcatagatg ccaggcacgt ttgtcttgtt gtactcgtcg acgagaatgg tgccgcggtc
      661 ggttttcacg ccgagttttt cgagcccgag attctcgata ttgccgacca cgccgaccgc
      721 ggagatcacg cgctcaacgg tgatggtttg cgttttcccg ccctcctcca tcgtcgcaac
      781 gacgctgtcg cctttcttgt ccagctttgt gatcttcgcg ttcgtatgga ttttgatgcc
      841 ctgtttctcg aagctcttgc gcgcaaaggt ctggatatcg tgatcctcga ccggcagaat
      901 ttgcggcagc acttcgacca ccgtgacctc ggatccgagc gtgcgataga acgaagcgaa
      961 ttcgatgccg atcgcgccgg aaccaatcac cagcagtgac ttgggcaccc gatccggcac
     1021 catggcctcg aaataggtcc acacaagctt cttgtcgggc tcaatgcccg gcagcacgcg
     1081 cggccgcgct cctgtggcaa tgatgatgtg cttggcctga tagctgccgg cccccaatgc
     1141 gccctttggc gcttcgctct tcgaggcctt gaccgtgacc ttgcccggcg catcgatcga
     1201 agcttcgccc cagatcaccg agaccttgtt ctttttcatc aggaatccga cgccatcgtt
     1261 gaggcgtttg gacaccgcgc gtgaacgcgc caccacgcct ttggcgtcgt agccgacatt
     1321 gtcggccttc aggccataat cttttgcgtg ctggaaatag tggaagatct ctgcggagcg
     1381 aagcagggcc ttggtgggga tgcagcccca attgagacag atgccaccga ggtagtcgcg
     1441 ctcgataatc gctgtcttgt agccgagctg gcttgcccgg attgcagtca cgtacccgcc
     1501 ggggccggcg ccgataatca ggacgtcgaa ggaactatct gccacacagc actccgcaat
     1561 ttcctgatag ctacacgacc atcatcaccg gattttcgac caaggtcttg aactcgcgaa
     1621 tgagctcggc gccgagcgca ccatcgatcg cgcgatgatc gcatgacagc gtcacgctca
     1681 tgatggtcgc aacggcaagc tggccgttgc gtaccaccgc acgctcttcc cctgctccaa
     1741 cggccaagat cgtcgattgc ggcggattga tcaccgccgt gaaatccttg atgccgtaca
     1801 ttccgaggtt cgacacagac gaggtgccgc cctgatattc gttcggcttg agtttgcgct
     1861 ctcttgcgcg cgccgccaga tcgcgcatct cgttggaaat cgccgacagc gatttgcttt
     1921 cggcatggcg cacgatcggg gtgatcagcc ctcccggcaa tgctacggca accccgatat
     1981 cggaatgctt gtgcttgagc aatccggcct cggtccagct tacattggca tcgggaatgc
     2041 gctggagtgc gaccgcaagc gccttgatga cgaagtcatt gacggaaagt ttgtaggccg
     2101 gcttgccgtc cttccccttt ggcacggcgg cattaatctc ttcgcgcgca gctgtcaggc
     2161 gaccgatgtc gcaatccatc gtttcgtaga aatgcgggat ggtctgtatc gaggccgtga
     2221 gccgctgcgc aatggtccga cgcatgttgt cgtgcggaat gagctcgtat gagccgtccg
     2281 caaagagcgc gcggacctgc gcatcggaca ttgccggagc aatcacggct ccgccggccg
     2341 gcgcagcgct cggtgcgcgc aagcccttcc cggatttcgc ctgctcgata tcgcgcgcaa
     2401 tgatgcggcc gtgcggaccc gagccttgta cccggttgag gtcgatgttg gcttctttcg
     2461 ccaatcgacg cgcgagcggc gaggaaaaga tgcggtttcc acgcgtggcc ggtaccgcct
     2521 caaccgtcgg cggcgacggc ctctgggggc gtggcgccgc gcctggggct tccgctggct
     2581 tttgaggcga aggctgcggc gcagcggcaa tgggttcgcc ttttttctcg gctgtctttt
     2641 ggggcggcgc gctctttgcc gcgctcgcgg ccgctttcac atcttcgcct tcgcccgcca
     2701 gaacggcaat tacggaattt accgcgacgt cctgtgtgcc ctccggcaca acgatcttgg
     2761 ccaacgtgcc gtcctcgatc gcctcgtact ccatcgtcgc cttatcggtt tcgatttcgg
     2821 cgatgacatc gccagacttg atcttgtcac cctctttctt gagccagcgc gcaagattgc
     2881 ccttttccat tgtgggcgac agcgcgggca tgaggatgtt agtgggcacg gggcggctct
     2941 ctgagtcctc aacttatcgc cgaggtcacg ccgaggtcgg tcggcgtatc gagctcgcca
     3001 tcaaatgcca tgcggatgtg gtcgataacc tttcgctcgg gaatattatg ttcggtcgca
     3061 taaatacgag cgacatggcg cgtaatgtcg gcgagcgcca cgccccataa ccctgggtcg
     3121 tcaaacgcgc ggattagcga gacgtgcaag gcaccctcga ccacggcggc acggagcacc
     3181 tcatcgccac ccttctcgag cgctgctggc ggcgcattga gagcgttaaa tgacagactc
     3241 atggcgtttc ctatgcataa cagaccaatt tagctgcctc gacgacttcc gcgaccgaag
     3301 gcagcgccag cttctcgaga ttggcggcgt aaggcatcgg cacatctttt cccgccacgc
     3361 gcgcgaccgg cgcgtcgaga tagtcgaagg cgtgctccat gatgcgcgca gcaatttccg
     3421 cgcccacgcc ggactgttgc caaccttcct caaccgttac aacccgaccg gttttttgaa
     3481 cggaagcaat aatcgtttcc gtgtccatcg gccttatcgt gcgcaggtcg attacctcgg
     3541 cgtcgatgcc ctcgttcgcc agctcttcgg ccgctttgag cgcgtaggtc atccccatgg
     3601 cccaggatac gatggtcaca tcgttgcccg gccgcacaat ttttgctttt ccgatcggca
     3661 acacgaaatc atcgagtttc gggaccggtg atgaatgccc gtacaaaatt tcattttcga
     3721 ggaagatcac cggattgggg tcgcggatgg ccgcttttaa gagacccttc gcatccgcgg
     3781 cggtcgaggg tgcaattacc ttcaagccgg gaatgtgcga ataccaggcc gaatagtcct
     3841 ggctgtgctg cgcggcgacg cgcgctgcag caccattcgg accgcggaaa acaatctgac
     3901 accccatctg cccgccggac atgtaaagcg ttttggccgc ggagttgata atttgatcca
     3961 atgcctgcat ggcgaaattg aaagtcatga actcgacaat aggcttcagc ccggcaagcc
     4021 cggcgccgat acccagacca gcaaagccat gctcggtgat cggagtatcg atcactcggt
     4081 tggcgccgaa ctcctgcaag agcccctgcg tgaccttgta ggcgccctga tattcggcga
     4141 cctcttcgcc catgacgaag acgcccttgt cgcgccgcat ttcctcggcc atggcgtcac
     4201 gcaacgcctc gcgcatcgtc atggtcacca tttcggtgcc ttcaggaatg tcaggatcgc
     4261 tggcgatgtg ctggacgggc gcctcaggag ccttggacgg ttttggcgcc ggcgcctcct
     4321 gtacctttgc ctcctgtttc tgggcttgta ccggcggcgc ggactcggct gctttttgct
     4381 gttgagaggg ctttgtcgcc ttgattgccg ccttgtcctc gccttcgccg aggatcaccg
     4441 cgatcggcgt attgaccgca acatcggcag tgccttcggg caccaggatc ttgccgagcg
     4501 tgccctcgtc cgccgcctcg acttccatcg tcgccttgtc ggtttcgatc tccgcaatca
     4561 cgtcgcccga tttaatcttg tcgccttctt tcttcagcca ttttgcaagg ttgcccttct
     4621 ccatcgtggg cgacaacgcg ggcatgagca cttcggtcgg catgggcttt atggctttga
     4681 ggacaacacg aacttagcga taaacatcgg tataaagttc tgagacgtct ggctccggat
     4741 catgcgtggc gaactcggcg gcttgattga cctggtcgcg tacctcggcg tcgattttct
     4801 ttagcgcctc ctcattggcg aatttctttt caaggatgcg ctgccgcgcc atgtcgatcg
     4861 gatcatgatg cgtgcggatc tcgtccacct cttcacgggt gcgatacttg gccggatctg
     4921 acatcgaatg cccgcggtat cgataggtga gcatttcgag aatatagggg cctttgccgg
     4981 tgcggcacca ttgagcggcc ttttcgccag ccgctttcac tgcgcgcaca tccatgccgt
     5041 ctacctgatc accgggaatg ttgaaggaca agccgcgacg ggacaggttc acttccgcat
     5101 gcgatcgcgt gatcgccgtg cccatcgcgt agcgattatt ttcgatcacg tagatcacgg
     5161 gcagcttcca cagcgaagcc atgttgaagc tctcgtagac ctggccctgg ttggccgcgc
     5221 cgtcaccgaa ataggtaagt gaaaggttgt cggtaccgcg atagcgatcg gcgaaggcaa
     5281 gtcctgtccc cagcggcact tgcgcaccaa ctatgccgtg tcccccataa aaccctttct
     5341 cgacgctgaa catatgcatc gagccgcctt tgcctttgga gtagccatgg gcgcggcccg
     5401 tcagctcggc catgattccc ttcagatcca tgcccgttgc aatcatgtgg ccgtggtccc
     5461 gatagccggt aatgacctgg tcacccggct tcagcgtcat ctgcatcccg acgacgacgg
     5521 cctcctggcc gatataaagg tggcaaaatc cgccgatgag acccatgccg tacatctgcc
     5581 cggccttctc ctcgaagcgg cggatggtca gcatggtgcg ataagcggag agctcttctt
     5641 ccttgctgaa ctcggtgatg acgaccttgg gttccggggt cggagttttt tgggcgaccg
     5701 ccattcgcac tcccttcgaa agcgtccggc tattgtgacg ggcgtcggtg ggctttccca
     5761 aaccccaata gcttaaattc tgcggcggcg aaagcgtcgg gctgtcgcca aggattgcgc
     5821 aaaatgcctt gaatttggcc aaaaatttca acgcaacccg tggataaacc ggctgctcgc
     5881 cggcggttgc taccggggat ttagcaggag ggtcagatcg cgccggtcga catatccgat
     5941 cagagcgcgg acccgttcgt ccaacatatc ggggtcgatg cggtcggcgc gcagaagtga
     6001 gacccgacgt tcccaatgcg cccgctccgc cttgagctcg gtgagctcgg acttcattac
     6061 cgcaagctgc tgctcgagat cctgctgcgc ccgcagccca tgatttccag taaacgcgtt
     6121 ggcggcgaaa tagccgatga acaaggccgc aaaaacgtag agaccgagaa cggtcaagat
     6181 ggtgcggcgg cgacgatggg tgaccatggc cggcag
//
LOCUS       DATDHO010000348         3805 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_264613, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000348 DATDHO010000000
VERSION     DATDHO010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3805
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_264613"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..164)
                     /locus_tag="VIY07_06710"
     CDS             complement(<1..164)
                     /locus_tag="VIY07_06710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY6381481.1"
                     /translation="MAGSIETKLASLGITLPAPASPIANYVPFVRSGKMLVVSGQICF
                     GDDGKLVAKG"
     gene            336..1202
                     /locus_tag="VIY07_06715"
     CDS             336..1202
                     /locus_tag="VIY07_06715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity EipB family protein"
                     /protein_id="HEY6381482.1"
                     /translation="MNTVARVRFFSLSMITVVLSAAAVERSPAAPPADRVLLAPHRAI
                     YDLKLAKSHGSRGIEAIRGRILYDFSGNACEGFELKFRQVSEIDSGEGKAALSDLRST
                     TWEDGDAKKFRFSSENLFNERSTDVVDGLAERNAQAVAVRLSKPKQKNFTVPSGAVFP
                     TEHMRRIITAAREGRSVLEFPVYDGSETGDKLYNTLTVIGHSIAPGEKTPTDAGAKTL
                     ANLTRWPVTISYFDKLDAKSEQGGEQTPVYSIGFELYENGVSRALVLAYPDFIINGEM
                     TSLEMKAEKPCP"
     gene            complement(1210..2457)
                     /locus_tag="VIY07_06720"
     CDS             complement(1210..2457)
                     /locus_tag="VIY07_06720"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEY6381483.1"
                     /translation="MTFCRDCLVDAADQATRCPRCASPRLVRHPEAASLSIAHIDCDA
                     FYATIEKRDDPTLADKPVIVGGGKRGVVAAACYVARTYGIRSAMPMFEARRRCPDAVV
                     IKPNMAKYVQVGREVRKAMFALTPLVEPLSIDEAFLDLTGTQRLHGMSAAKVLARFAS
                     EVERRLGITVSIGLSVNKFLAKIASDLDKPRGFAVLGQSEAVTFLAEKPVGFIYGVGA
                     VSAAKLASDGFRTIADLQRGEERDLMRRYGEEGARLWRLARGIDNRSVDPERDTKSVS
                     AETTFERDIGEFRPLEQYLWELTERVSMRLKANALAGSTVTLKLKSADFKIRTRARAL
                     GTPTQLASRIFAAGRDLLKHEVGTTRFRLIGIGVSNLEDAEGDDYADLIDRRAAEAEH
                     AVDRLRSKFGRNAVVKGLALDEN"
     gene            complement(2454..2750)
                     /locus_tag="VIY07_06725"
     CDS             complement(2454..2750)
                     /locus_tag="VIY07_06725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3572 domain-containing protein"
                     /protein_id="HEY6381484.1"
                     /translation="MKGRPALTREQAEALAIQALTFIGGDAERLGRFLAVTGIGPVEI
                     RSAASQPGFLGGVLEYMASDERLIAAFAAENNLDPADVDRGRLVLADVWERDLP"
     gene            2864..3235
                     /locus_tag="VIY07_06730"
     CDS             2864..3235
                     /locus_tag="VIY07_06730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6381485.1"
                     /translation="MPKTVLIVEDNELNMKLFHDLLEAHGYNTVGTRNGIEALDLARK
                     HRPDLILMDIQLPEVSGLEVTKWLKDDAELKAIPVVAITAFAMKGDEERIREGGCEAY
                     LSKPISVGKFIETIRHFLGSG"
     gene            complement(3518..>3805)
                     /locus_tag="VIY07_06735"
     CDS             complement(3518..>3805)
                     /locus_tag="VIY07_06735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381486.1"
                     /translation="IEVLFRQRQQIDIQIVAFNAGLHMLRDDTSPVKPRLKSFKEGMP
                     NVSFMACENTLDAMTRREGKEPTLVDNVQRVKAGVVTLIELGEKGWTIVRP"
BASE COUNT          750 a         1145 c         1132 g          778 t
ORIGIN      
        1 tgacctttgg cgacaagttt cccgtcgtcc ccgaagcaga tctgtccgga tacgaccagc
       61 attttaccgc tgcggacaaa tggcacgtag ttcgcaatcg gacttgcggg agcgggcagg
      121 gtgatgccaa ggcttgcgag cttcgtttca atcgatccgg ccatgcgatc ctccgcggcg
      181 tgagactgga tgcgatcctt ggccgattga atggcggcac gcaaggcgtc caccggaatg
      241 gttgccggaa tccgccaccg cctctatcct gcccagatcc tgcatctttc tgctccagga
      301 ggcggcgttt gggccgcggg ggagaggtca gaatcatgaa caccgtcgcc agagtcagat
      361 ttttctctct ctccatgata acagttgtac tgagcgctgc tgcggtcgag cgttcgccgg
      421 cagctccgcc tgccgaccgc gtgctgctcg cgcctcatcg ggcaatctat gatctcaaat
      481 tggccaagtc ccacggcagc cgtggcattg aggcaattcg cggtcgtatt ctttatgatt
      541 tttccggaaa cgcctgcgag ggcttcgagc tgaaattccg gcaggtctct gaaatcgatt
      601 ccggagaagg caaggcggca ctgagcgacc tgcgctcgac cacgtgggaa gacggggacg
      661 ccaaaaagtt tcgtttcagt tccgaaaacc tgttcaatga gcgctccacc gatgttgtcg
      721 acggtctggc cgagcgcaat gctcaggcag ttgcggtacg gctgagtaag ccgaagcaaa
      781 agaattttac cgtcccgagt ggagcagttt ttccaaccga acacatgcgg cgaattatta
      841 ccgctgcacg tgagggccgg tctgtcctgg aatttcccgt ctatgacggt tcggaaacgg
      901 gcgacaagct ctacaacacg ctcaccgtta tagggcattc gatcgcgccc ggcgaaaaaa
      961 ccccgaccga tgcgggggcc aagaccttgg ctaacctcac gcggtggccc gttacgatca
     1021 gctacttcga caaattggac gcgaagtccg agcaaggtgg cgagcaaacg ccggtctatt
     1081 ccatcggttt cgagctttac gagaacggcg tttcgcgggc gctggtgctc gcctatccgg
     1141 atttcataat caacggcgag atgacctcat tggagatgaa agccgagaaa ccgtgcccgt
     1201 aaagggagcc tagttctcat ccagtgccag gcctttgacc accgcgttgc ggccgaactt
     1261 cgaacgcagc cggtccaccg cgtgttcagc ttccgccgcg cggcgatcta tcagatccgc
     1321 gtaatcgtcg ccctcggcgt cttccagatt gctgacgccg atgccgatca gccggaaacg
     1381 cgtggttccg acttcgtgct tgagcaggtc gcggcctgcg gcaaagatcc gggacgcgag
     1441 ctgggtcggt gtgccgagcg cccgcgcccg ggtgcgaatc ttgaagtcgg cacttttcag
     1501 cttgagcgtc acggttgaac cggccagtgc gttggctttg agccgcattg agacacgctc
     1561 ggtcaattcc cagaggtatt gttcgagtgg ccgaaattcg ccgatatcgc gctcaaaagt
     1621 cgtttcggcc gaaacgcttt tcgtgtcgcg ctccggatcg actgatcgat tatcaatccc
     1681 gcgcgccagg cgccacaggc gcgcgccttc ctctccgtat ctgcgcatga ggtcgcgttc
     1741 ctcgccgcgc tgcagatcgg caatcgtccg gaagccgtcc gaggcgagct tggccgcgct
     1801 gaccgcgcct acgccgtaaa tgaacccaac cggtttttcc gcgagaaacg tcactgcctc
     1861 gctttggccc aggactgcga agccgcgggg cttatcgagg tccgaggcaa tcttggcgag
     1921 gaatttgttg acggacaggc cgatcgaaac cgttatgcca agccgacgct cgacttcgct
     1981 tgcgaaacgc gccagcacct tcgccgcgct catcccgtgc agccgctggg tgcctgtcag
     2041 gtcgagaaat gcctcatcga tggacagcgg ctcgaccagc ggcgtgagag caaacatcgc
     2101 cttgcgcact tcgcgaccaa cctgaacgta ttttgccatg tttggcttta tcacgacggc
     2161 atccggacaa cgccgtctgg cctcgaacat cggcattgcc gaacgaatgc cgtaggtgcg
     2221 tgcgacatag caggcagcag ccaccacgcc gcgcttgccg ccgccgacaa tcaccggttt
     2281 gtcggccagc gtgggatcgt ctcgcttctc gatcgtggcg taaaatgcgt cgcaatcgat
     2341 gtgagcaatg ctgagagacg ccgcctcggg gtggcgcacc agacgcggtg aggcgcagcg
     2401 tggacagcgc gttgcctgat ctgcggcgtc gacaagacaa tcccggcaga aggtcatggc
     2461 aggtcacgct cccaaacatc tgcaagtaca agccgccctc ggtcgacgtc tgcaggatcg
     2521 agattgtttt ccgcggcgaa cgcagcgatc agtcgttcgt cggaagccat gtattccaga
     2581 acgccgccga ggaaaccggg ctggctcgcg gccgagcgaa tctccaccgg tccaatgccg
     2641 gttaccgcca gaaaccgccc gagtcgttct gcgtcgccgc cgatgaacgt aagcgcctga
     2701 atcgcaagcg cttcagcctg ttctcgtgtg agtgcagggc ggcctttcat cggctagatt
     2761 tgcctttccg taagaaatcg gcattacggt tgccgatcat gcccgagcat ggccgcgctg
     2821 gcgactgccg gctgtgtgca acggggaaat gggcggaaag ggaatgccaa agaccgtcct
     2881 gattgtggaa gacaacgagc tcaacatgaa gctctttcac gatctcctcg aagcgcacgg
     2941 ttacaatacc gtcggcactc gcaacgggat cgaggcactc gacctcgcgc gcaagcatcg
     3001 gcccgatctc atcctgatgg acattcagct gccggaagtc tccggcctcg aagtgaccaa
     3061 gtggctcaag gacgacgccg agctcaaagc cattccggtg gttgcaatta cggcattcgc
     3121 catgaagggc gacgaggagc gcattcgcga aggcggctgt gaggcttacc tatcgaagcc
     3181 gatctcggtt ggaaaattca tcgagaccat ccgccatttc ctcggatcag gctgacgccg
     3241 agagcggcgc aggacttcgc gaggcgtgat tgcccaagca ttccagcact ttaacggagc
     3301 gtttggtcag accgcgagct tagtctagcc tatcagtgac acatttgatt cggcgcgacg
     3361 acggtgcgcg ccctcaaggt ttctgcaata ccctgcggag tagctcaggt ccgccgcatc
     3421 tcctgggtcc gtggggttcg gccggcccgg gagcggcatg agtggcctcc tcatgccgtc
     3481 gcttcgggcc ggccacctgt ttcgcggaac atttttgcta gggtcggacg atggtccagc
     3541 ccttttcgcc gagctcaatc agagtgacca cgccggcctt cacgcgctga acattgtcca
     3601 cgagcgtcgg ttccttgcct tccctgcgcg tcattgcgtc gagcgtattc tcgcaggcca
     3661 tgaacgagac gttcggcatg ccctccttga aggacttgag cctcggcttc acgggagagg
     3721 tatcatcgcg caacatatgg agtccggcat tgaaggcaac gatctggata tcgatttgtt
     3781 gcctttgtcg gaatagaact tcgat
//
LOCUS       DATDHO010000349         3282 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_115986, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000349 DATDHO010000000
VERSION     DATDHO010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3282)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3282)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3282
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115986"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VIY07_06740"
     CDS             <1..544
                     /locus_tag="VIY07_06740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IB family phosphatase"
                     /protein_id="HEY6381487.1"
                     /translation="AMRGDIAFEPALRERVALLKGLPAKVIDEVIDRHIRLTPGGRTL
                     VATMRAHGAFTCLVSGGFTLFTDRIAAMIGFNETHANTLALEGDKLAGTVVEPIFGRD
                     AKRATLVSLRARLKLSKDETLVAGDGANDLDMILDAGLGVAFRAKPKIAAAAPARIDH
                     SDLTALLYVQGYHQKEFVSA"
     gene            complement(561..2009)
                     /locus_tag="VIY07_06745"
     CDS             complement(561..2009)
                     /locus_tag="VIY07_06745"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HEY6381488.1"
                     /translation="MAWPALTGPAAARGPDGIADVAEQVIDAVVNVSTKQSVDLRSGA
                     MPQLPPGSPFEEFFEEFFKNRRGQPGQKGENNQNGQNNQSPMPRRVNSLGSGFIVDPA
                     GLVVTNNHVIADADEVNVILNDGSTLKAEVVGRDQRTDLALLRVKPTKLLKAVKFGDS
                     DKLRLGEWVIAIGNPFSLGGSVTAGIVSARNRDIQSGPYDNYIQTDAAINRGNSGGPL
                     FNLNGEVIGVNTAIISPSGGSIGIGFAVPSKTALAVIDQLREFREVRRGWLGVRIQQV
                     SDEIAESLSVKPARGALVAGIDEKGPAKPAGIEPGDVIVKFDGKDVKEMRDLPKIVAD
                     TPVGKDVEVVVIRKGKEETKSVKLGRLEDEKKQAALTDKKDSTPEEKPVVKKALGLDL
                     ANLTDELRKKHNIKDKVKGVLITGVDPNSAAAEKRLAPGMVIAEVQQQPVTSATELQQ
                     RIEKLKKDGKKAAVLLVVSPDGDPSFVALSLQ"
     gene            complement(2181..2366)
                     /locus_tag="VIY07_06750"
     CDS             complement(2181..2366)
                     /locus_tag="VIY07_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HEY6381489.1"
                     /translation="MSDFLAALGLVFVIEGLIFAAFPEAAKRAMTSVLETPDISVRLI
                     GVGSAVVGLIIVWLARG"
     gene            complement(2383..>3282)
                     /gene="hflC"
                     /locus_tag="VIY07_06755"
     CDS             complement(2383..>3282)
                     /gene="hflC"
                     /locus_tag="VIY07_06755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HEY6381490.1"
                     /translation="GGILAVLIVAALIIGYSSLFTVYQTQQALVIRLGQPVKVVNEPG
                     LNVKAPFIDSVVYLDKRILDLEAPPQEVIASDQKRLVVDAFARYRIQDALRFYQTLGS
                     INGANSQISILLNSALRRVLGEVTFTHVVRDQRADLMSRIRELVDREAMGYGVQVVDV
                     RIRRADLPEQNSQAVYQRMQTERQREAAEFRAQGAQRAQEIRSRADRDVTVLVAEATS
                     KADQIRGEGDATRNQIFADAFNQDQDFFAFYRSMQAYEQGLKSNDTRMLLSPDSSFFR
                     YFGDPSGKLRGKTAPPSAQAPTR"
BASE COUNT          611 a         1046 c          971 g          654 t
ORIGIN      
        1 tgccatgcgg ggcgacatcg cgttcgagcc ggccctgcgg gagcgcgtgg ccttgctgaa
       61 aggcttgcct gccaaggtca ttgacgaagt catcgatcgg cacatcaggc tgacgcccgg
      121 tggccgcacg cttgtggcca ccatgcgcgc gcacggcgcc ttcacgtgcc tggtgtcagg
      181 cggcttcacg ctgttcacgg accggatcgc cgccatgatc ggcttcaacg aaactcacgc
      241 caacacgctg gcgctcgaag gcgacaagct ggcgggcacc gtggtcgagc cgatcttcgg
      301 tcgcgatgcc aagcgggcca ccctggtgtc cctgcgagcg cgcctaaaac tgagcaagga
      361 cgagacgctc gtcgccggcg acggcgcaaa tgatctcgac atgatcctgg acgcggggct
      421 cggtgtcgcc tttcgcgcca agccgaaaat tgccgctgcc gcgcccgcgc ggatcgacca
      481 cagcgatctc accgccctgc tctacgtgca aggctaccac cagaaggaat tcgtgagcgc
      541 gtagcgcgct gacagcctga ttactgcaag ctcagcgcca cgaaactcgg atctccgtca
      601 ggcgagacca cgagcagcac cgcggccttc tttccatcct tcttgagttt ctcgatccgc
      661 tgctgaagct ccgttgcgct cgtcaccggt tgctgctgga cttcggcgat caccattccg
      721 ggcgcgagac gtttctccgc cgccgcggaa ttcgggtcga ccccggtgat cagcacacct
      781 ttcaccttgt ccttgatgtt gtgcttcttg cgcagctcat cggtgaggtt cgcaagatcc
      841 aatccaagcg ccttcttgac gacgggcttt tcctccggcg tcgaatcctt cttgtcggtg
      901 agcgccgcct gcttcttctc gtcttcaagg cgaccgagct tgacggactt tgtctcttcc
      961 ttgcccttgc gaatgaccac cacctcgaca tccttgccga ccggcgtgtc ggcaacgatc
     1021 ttgggcaggt cgcgcatttc tttcacgtcc ttgccgtcga acttgacgat gacgtcgccc
     1081 ggctcgatgc cggcgggctt ggccggtcct ttttcgtcga tgccggcaac gagagcgccg
     1141 cgcgccggct tgacgctgag gctctccgca atttcatcgc tcacctgctg gatgcgcacg
     1201 ccgagccagc cgcggcgcac ttccctgaac tcacgcaact ggtcgatcac cgccagcgcc
     1261 gtctttgacg ggacggcaaa gccgatgccg atcgagccgc ctgacggcga gatgatcgcc
     1321 gtatttacgc cgatcacttc gccattgaga ttgaacaatg gccctccgga attgccgcga
     1381 ttgatggcgg cgtcggtctg gatgtaattg tcgtaggggc cggactggat gtcccgattg
     1441 cgggccgaga cgatcccggc ggtgaccgac ccaccaaggc tgaacggatt accgatagcg
     1501 atcacccatt cgccgagccg caacttgtcg ctgtccccga acttcacggc ctttagcagc
     1561 ttggtcggct tgaccctgag cagcgcgaga tcggtcctct gatcgcggcc gacaacttcg
     1621 gccttcagcg tcgacccatc gttcaggatg acgttgacct cgtcggcatc ggcgatcacg
     1681 tgattattgg tcacgaccag gcccgctgga tcgacgatga agcccgaacc caacgagttg
     1741 acgcgccgcg gcatcggcga ctgattgttc tgcccgttct ggttgttttc gcccttctgc
     1801 cccggctggc cacgccgatt cttgaagaat tcttcaaaga actcctcgaa tggcgaccct
     1861 ggcggcaatt gaggcatcgc gccactgcgc aaatcgacgg attgcttggt cgacacgttg
     1921 accacggcgt ctatgacctg ttcggccacg tccgcgatgc cgtccggtcc acgggccgca
     1981 gccggaccgg tcagtgccgg ccaagccatg acagcagcag tgaaaattgc caggccagcg
     2041 cggccggtcg aggttctaga gcggaagaaa tgtgcgccca ttggcgtcga ttctcctagg
     2101 ggtaagcttt cgatgagagt ggccccgact tcgaggcgtt tcaagggcat ctcgatcaat
     2161 accacgggaa gcccgatact tcatcctctg gccagccaga caataatcag tccgacgacc
     2221 gcagaaccaa ccccgatcaa ccggaccgag atatccggcg tctccaatac gctggtcatg
     2281 gcccgtttgg cggcctccgg aaacgcggcg aagatcaagc cttcgatgac aaacaccaat
     2341 ccgagcgcgg ccagaaagtc ggacatgcga ctcgcgcgtt tgctatcggg ttggcgcctg
     2401 ggcagacggt ggcgctgtct ttccccgcaa cttgccggaa ggatcgccga aatagcggaa
     2461 aaagctcgaa tcgggcgaga gcagcattcg cgtgtcgttg cttttcagcc cttgttcgta
     2521 agcctgcatc gaacggtaga acgcgaagaa atcctgatcc tggttgaagg catcggcaaa
     2581 gatctggttg cgcgtcgcat cgccttcacc gcgaatctgg tccgcttttg aagtcgcctc
     2641 cgcaaccagc acggtaacgt cgcgatcggc gcgcgagcgg atctcctgtg cgcgctgcgc
     2701 accctgggcg cggaactctg cggcttcgcg ctgccgctcg gtttgcatgc gctgatacac
     2761 ggcctggctg ttttgttcag gcagatcggc gcgccggatg cgaacgtcga cgacctgtac
     2821 gccgtagccc atggcttcgc ggtcaaccaa ttcgcggatg cgactcatca ggtcggcacg
     2881 ctgatcccgc acaacatgcg tgaacgtcac ttcgccgagg acccggcgaa gcgcggaatt
     2941 caggaggatg gatatttgcg aattggcgcc attgatggag cccagcgtct gatagaagcg
     3001 cagcgcgtcc tggatgcggt agcgcgcgaa agcatccacc accagtcgct tctggtccga
     3061 ggcgatcact tcctgtggcg gcgcttccag atcaagtatc cgcttgtcga ggtagacgac
     3121 cgagtcaatg aatggagctt tgacattcag gccgggctca ttgaccacct tgaccggctg
     3181 accgagacga atgaccagcg cttgctgcgt ctgataaaca gtgaacagag aggagtatcc
     3241 aatgatcagc gcagccacaa tgaggactgc gaggatcccg cc
//
LOCUS       DATDHO010000350         4777 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_115993, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000350 DATDHO010000000
VERSION     DATDHO010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4777
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_115993"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..326
                     /locus_tag="VIY07_06760"
     CDS             <1..326
                     /locus_tag="VIY07_06760"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY6381491.1"
                     /translation="GYLSESMAEAVSPGGRVLGLDISKDILEFARRRNANPSLSYRQG
                     DAMALSEPDGSFDVAVSMQVLEYIPDADLGMREWRECLSQADVRWWWPLTGTPSCGIR
                     KIRSA"
     gene            323..637
                     /locus_tag="VIY07_06765"
     CDS             323..637
                     /locus_tag="VIY07_06765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381492.1"
                     /translation="MRQVLHAWERHCTDPHLPRTMISRMKAAGLSVGGVRGYPIINTR
                     LGEDVYSDGILRLIVDFVHKQDLVDQETLESWSAEQRVMSDEGRYFFGTMRYFFPARK
                     PR"
     gene            complement(677..817)
                     /locus_tag="VIY07_06770"
     CDS             complement(677..817)
                     /locus_tag="VIY07_06770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381493.1"
                     /translation="MKFILGVFVGAALMVGSAYVHDTGMVKAGPQQPFVNWDTVIGML
                     GR"
     gene            1070..1570
                     /locus_tag="VIY07_06775"
     CDS             1070..1570
                     /locus_tag="VIY07_06775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381494.1"
                     /translation="MRHRMIAVLVAAILPFAVGAQETQRAKDAPKEAAKDLPKTYLPG
                     LEQFMNVILIEHNKLWFAGQARNWPLAAYELGEIKEVMSDVQDHIPTFKNLPLADMLD
                     AVITKEIVALEKAIDAKDYKSFAAGYDQLTAACNTCHQGTENGFIVIKRPTRPAFTNQ
                     DYLPRK"
     gene            1634..2362
                     /locus_tag="VIY07_06780"
     CDS             1634..2362
                     /locus_tag="VIY07_06780"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY6381495.1"
                     /translation="MTTPEELKQLAPTGKLRGGVVTAPAASAFFAIRDGKGELKGVTV
                     DLIRSFSSALKLPLALQVYDNSGQVTDAVAKGECDIAFMPQDAERAKRVDFGPVYYFI
                     ESTYLVPAGSTIKSIDEVNRPGRRIIAISNTTTARSARRTAPSANVEEVASVEQMTEL
                     AKQGLGDAFALSHDSFAGLLPKLPGARVLPGNFQQTGIAIAVPKGRPVALKIASELLE
                     IAKTSGVVRRALDAAGFREASVSP"
     gene            complement(2366..3337)
                     /locus_tag="VIY07_06785"
     CDS             complement(2366..3337)
                     /locus_tag="VIY07_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017277311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone reductase"
                     /protein_id="HEY6381496.1"
                     /translation="MQAVYYERNGAAREVLQIGEIQTPRPGPGEVRVKLVASGVNPSD
                     VKSRQGTTRKIAFPRVIPHSDGAGVIDEVGDGVSRSRIGERVWVWNGQWKRAFGTAAE
                     CIVLPSVQAVALPGNVGFEAGACLGIPAMTAVHAVVLANASTDTTLLVAGGAGAVSQY
                     AIQFAKARGAKVIATVSSPEKAGIAQEAGAQHVIDYKRENVGDRVMEITGKRGVDAVI
                     EMDLSANAKLIPGVLRPKGTVVVYGTGPEAVLPAAFCLVNSLRLQFFLVYELDSVERD
                     RAVAAVNDALRNGLLNRVARPTFALADTVAAHEAVQRGTIGNVIITM"
     gene            3462..3698
                     /locus_tag="VIY07_06790"
     CDS             3462..3698
                     /locus_tag="VIY07_06790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381497.1"
                     /translation="MNFRVYSGPKGSADVSPIEKSQLLFKEFATLDDALSWARHLEGT
                     GRMPLLIEGDDGTRMNRRAIADALGVGMREQLDR"
     gene            4340..4564
                     /locus_tag="VIY07_06795"
     CDS             4340..4564
                     /locus_tag="VIY07_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381498.1"
                     /translation="MQPTAMAELPVRSHKYQVGETVYYTSPTFGRAAATGSYLVVKLL
                     PSEGDDYQYRIKSSGEAFERVAKESQLDRA"
BASE COUNT         1001 a         1426 c         1413 g          937 t
ORIGIN      
        1 cgggctacct aagcgaaagc atggcagagg cggtctcgcc cggcggccgt gtgcttggcc
       61 ttgatatctc caaagacatt ctggagttcg cccggcggcg aaacgcaaac ccgtcgctgt
      121 cgtatcggca aggggacgcg atggccctat ccgagccgga cggctccttc gatgttgctg
      181 tcagcatgca ggtgcttgaa tacatcccag acgccgatct cggcatgcgc gaatggcgcg
      241 agtgcttaag ccaggcggac gtgcgttggt ggtggccact gactgggacg ccctcgtgtg
      301 gcattcggaa aatccgcagc gcatgagaca ggtgctgcat gcctgggagc ggcattgcac
      361 cgatccacat ttgccgcgca cgatgatttc ccgtatgaaa gctgccgggc tgtcagtcgg
      421 cggcgtccgt ggatacccaa tcatcaacac gcggctcggc gaagatgttt acagcgatgg
      481 tattcttcgg ctgatcgtcg actttgtgca caagcaagac ctcgttgatc aagaaacgct
      541 tgagtcgtgg agcgctgagc aacgcgtgat gagcgatgaa ggtcgctatt ttttcggtac
      601 gatgcgctat ttcttcccgg ctcgaaagcc gcgctagccc gcgcgcgccg acccgtcggc
      661 caacaacagc caccgtttac cggccaagca tcccaatgac cgtatcccag ttcacgaagg
      721 gctgctgcgg acctgctttg accatcccgg tatcatggac ataggcgctc cccaccatca
      781 gcgctgcacc aacaaaaacg cccaggatga atttcatgcg ctgcctcccc aagttttggc
      841 tgcaagcctc gaatgtacgt aagggagtct tatattgttt catgccaccg gcggcggtaa
      901 taccaggcgc tcgcaatgcg agggcgagcc tgctggcgac acgggctttt gccgccgccg
      961 gattttgaat tagacaaatt ccaaagttat ttccgtatct tgcaatgttg ctcgcgcaat
     1021 gacagagatg cggtgcgcgc ctccgcgctt cgcgaagcga gaacgccgca tgcgtcaccg
     1081 aatgattgcc gtccttgtcg ccgcaatttt gccttttgcc gtaggcgctc aggaaacaca
     1141 gcgagccaag gatgctccga aagaggcggc aaaagatttg ccgaaaactt atttgcccgg
     1201 acttgagcag ttcatgaatg tgatcctgat cgagcacaac aagctttggt tcgccgggca
     1261 agcgcgcaac tggccactcg ccgcctacga gctcggagaa ataaaggaag tcatgtcgga
     1321 cgtgcaggat cacataccga ccttcaagaa cctaccgctc gccgacatgc tcgacgccgt
     1381 cattaccaag gaaatcgtcg cgcttgagaa ggcgatcgat gcaaaggact acaagagttt
     1441 tgcggctggg tacgatcagc tcactgcggc atgcaatacg tgtcaccagg gcactgaaaa
     1501 cggcttcatc gttatcaagc gtccgactcg gccagccttt acaaatcagg actacctccc
     1561 gcgcaaatag gagcgggcat ccaactctgg tggagaccgt agcccgtcgc atgagcgcat
     1621 gttaaggcgg gtcatgacca ctccggagga gctcaagcag ctggcgccga cagggaaatt
     1681 gcgtggtggg gtcgtcacgg cgcctgcagc ctctgccttt ttcgcaatca gggacggcaa
     1741 gggcgaactg aagggcgtca cagtcgacct gatccgcagc ttctccagcg cactgaagct
     1801 gccgctggcg ctgcaggtct acgacaattc cgggcaggtc acggatgccg tagccaaagg
     1861 ggagtgcgac atcgctttca tgccgcaaga tgccgaacgc gcgaaacgcg tcgacttcgg
     1921 accggtctac tatttcattg aaagcactta cctggtgccg gcggggtcga cgatcaaaag
     1981 catcgacgag gtcaatcgac cggggcgccg gatcatcgcc atctccaaca ccacgacggc
     2041 gcgcagtgcg cgccgcacgg caccaagcgc caacgttgag gaagtcgcga gcgtcgaaca
     2101 gatgaccgag ctggccaagc aagggctagg cgatgcgttt gccctgtcac acgattcttt
     2161 tgcggggctg ctgccaaaac tgccgggtgc acgcgtgctg ccgggcaatt tccagcagac
     2221 cggcattgcg atcgcggtgc cgaagggacg gcccgttgcg ctcaagatcg ccagcgaact
     2281 gctcgaaatc gcgaaaacct cgggagtggt gcgacgcgcc cttgatgccg ccggatttcg
     2341 cgaagcttcg gtgtcgcctt aaatttcaca tcgtgatgat cacattgcca atggtcccgc
     2401 gctggacagc ttcgtgcgcg gcaacggtgt cggcaagtgc aaaagtgggt cgggctaccc
     2461 ggttaagcaa cccgtttctg agcgcatcat tcacggccgc cacggcccgg tcgcgttcga
     2521 cggaatcaag ctcgtatacg aggaagaatt ggagacggag agaattgacg agacaaaacg
     2581 cggcaggcag aaccgcttct ggtcccgtgc catagacgac gacagtgccc tttggccgca
     2641 gcacgcccgg tataagcttg gcgttcgcgc tgagatccat ctcaatcacc gcgtcgacgc
     2701 cgcgtttgcc ggtgatctcc atgacacgat caccgacatt ctcgcgcttg tagtcgatga
     2761 cgtgctgcgc ccccgcttcc tgcgcgatcc cggctttttc cggcgaggat acggtcgcga
     2821 ttacctttgc gcctcgcgct tttgcgaatt gaatggcgta ttggctgacc gcgccggcgc
     2881 cgcccgccac caatagcgtc gtatccgtcg atgcatttgc gagaacgaca gcgtgcacag
     2941 ccgtcattgc gggaattccc aggcatgcgc cggcttcaaa tcccacgttt ccaggcagtg
     3001 ccaccgcttg cacggacggc agcacgatac attcggccgc ggtgccaaat gcacgcttcc
     3061 attgtccgtt ccaaacccaa accctttcgc cgatgcggga tcttgatacg ccgtcgccga
     3121 cctcatcaat tacgccggcg ccgtcgctat gcggaatgac gcgcgggaaa gcgattttgc
     3181 gggtcgtgcc ctggcgtgat ttcacgtcgg acggattgac gcccgaagcg accagcttga
     3241 cccgtacctc gccagggccg ggacgcggcg tctgaatctc gccgatctgc agcacttcgc
     3301 gggcggcgcc attgcgctcg taatagacgg cttgcatgga ttctacccct tggtacccgc
     3361 aggataacat gaggaggccc ggttcaattg atctgaacct cacatcctat tgggcgttag
     3421 ccctctcggc tccggagcgg ggcggaagcg tgaggtacaa tatgaatttt cgtgtttata
     3481 gcggccccaa aggatcggcg gatgtgtcgc caatcgaaaa atcgcaactg ctgttcaagg
     3541 agtttgccac tctcgatgac gcgttgtcct gggcgcgcca tctggaaggc actgggcgca
     3601 tgcccctgct catcgagggt gacgatggga cgagaatgaa tcggcgcgcc attgctgacg
     3661 cgctgggagt tggtatgcgc gagcaactcg acaggtaggc gcgcgggctc gctcagctgc
     3721 tggctaaccg gttccactcc gcacgggcgc gggctgtcag gcggttccag ttgttgctga
     3781 cgacgtccca gttcaccatc gggcgctccg tgctcgcggt gctcgtgggc gcctgtgggg
     3841 tatgcgagtc ataaaggtat gccccaccga cggtgaggac tacgccgagg ataattccga
     3901 tgaggacgcg catgatgaaa ctccgttccc gacctgaaac gcagccgatt aggtgcggtt
     3961 cccatgcttt ttaaggttct agccgctaat tgtgaccgca aaccaaccga ttttcggcac
     4021 ccctttagtt gacgttagac cggcattgcg cgtatcttaa cctattgaaa tcacttgcgt
     4081 tccagcccaa aaaactttgc ccgcaaatga aatttgctgc tatattgaag taatgagcaa
     4141 acattcaaca aaagcggccg ggcggtcggc caagacggca aggcgaaccg ccaaaaaagc
     4201 cgcaaagagc gtccgcgccg cgacaaaaaa ggcctcaaag tcggctcgcc atccggtggg
     4261 tacagccacg cggccagcga gaacgacggt tctcagtccg gcgaaaccgg caagcatgcc
     4321 ccgcacgccg agtccgccga tgcagccgac cgcgatggcg gagcttcccg tgcgttcgca
     4381 caaatatcag gtcggagaga ccgtttatta cacctcgccg acctttggcc gtgccgccgc
     4441 gaccggaagc tatctcgtcg tcaagctgct gccttccgaa ggcgacgact atcagtaccg
     4501 gatcaagagc tccggcgaag ccttcgaacg cgtggcgaaa gaaagtcagc tcgatcgcgc
     4561 ctgatcgtgg cgccgatatc ccgtcgcgat tttgccgcgg gctttcccta ccatggcgcg
     4621 cacttgcagc tgcgatgccg cgggaggcga tccatgccga tttatatcac tcaagggcgt
     4681 tatacccgcg aggcgatcaa ggggatgatc gtcaaaccgg aggatcgcgc cgatgctgtg
     4741 gcgcgactac tgtccaaagc cggaggacgg ttgttgg
//
LOCUS       DATDHO010000351         1561 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_362681, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000351 DATDHO010000000
VERSION     DATDHO010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362681"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..907
                     /locus_tag="VIY07_06800"
     CDS             80..907
                     /locus_tag="VIY07_06800"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY6381499.1"
                     /translation="MPNALDEARRELALANRIVANEGVIDAFGHVSMRHPENQNRYLL
                     SRSRAPELVTPDDFIEYDLDSQPLRDPGVGQYSERVIHGEIYKARPEVNSVCHHHCPA
                     FMPLLATGTDYMPVFHLGAVGGIRPPFWDQRDEFGDTNMLVVKPEEGASLARALGKHW
                     MVLMMRHGVTVAGTSLRDCVFRSVFSARNAEYQVRALTIGTDIAMLSPGETKLAGQIS
                     SKTTGLMRSWEYWSMRVANKAAAPASVASKAGPPRTKTSRMRSKARPKRAAKTRRRR"
     gene            972..>1561
                     /locus_tag="VIY07_06805"
     CDS             972..>1561
                     /locus_tag="VIY07_06805"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381500.1"
                     /translation="MNRVMNLAGAIGLIAPLALAADSASAEDTLKVVIGQINNWENQA
                     PTLGQDAGIFKKHGLVLENTGTQGAGETIQAVISGSADIGAGVGAAGVMRAFSKGAPV
                     RILAPAFTGTGDLYWYVKPDSKIQSLKDTTPENTIAYSTNGSSSHNIVVAFTSELGAK
                     AKPTATGGPAGTLTAVMSGQVDIGWAAPPFGLNEIK"
BASE COUNT          315 a          483 c          479 g          284 t
ORIGIN      
        1 caagctccgg gcatgctggc ccggcgtttt cattgcccta taatgcacgc atcatcagaa
       61 ttcttgaaag gaaaacgttg tgccgaacgc acttgacgaa gcccgccggg agctcgcact
      121 cgccaatcgg attgttgcca acgagggcgt cattgacgcc ttcggccacg tcagcatgcg
      181 tcatcccgag aaccaaaatc gttatctgct gtctcgatcc cgcgcgcccg agctggtgac
      241 gccggacgat ttcattgaat acgacctcga ctcgcagccg ctgcgcgacc ccggcgtcgg
      301 ccaatattcg gagcgggtga tccacggtga aatctacaag gcgcggccgg aagttaattc
      361 ggtctgccat catcattgtc cggcattcat gcccttgctt gccaccggca ccgactacat
      421 gcccgttttc cacctcggag ccgtcggcgg gatccgcccg ccgttctggg accagcggga
      481 cgaatttggc gataccaaca tgctggtcgt aaagccggag gagggcgctt cgctcgcccg
      541 cgcgcttggc aagcattgga tggtgctgat gatgcgacat ggcgtcactg tcgccggcac
      601 cagcttgcgg gactgtgttt tccgctcggt gttttcggcg cgcaatgccg agtaccaggt
      661 gcgagcgctg acgatcggca ccgacatcgc catgctgtcc ccgggcgaga caaaactggc
      721 tggccagatc agttccaaga ccacgggcct catgcgctcg tgggaatatt ggtccatgcg
      781 tgtggccaac aaggcagcgg ctcctgcctc tgttgccagc aaggccggac cgccgcgcac
      841 aaaaaccagt cggatgcgca gcaaggccag gccgaaacgg gccgccaaga cgcgacgccg
      901 acgttgagct attgaatgca gccccgcaga ggccgtaccg tcgcgtcaac aagtataaag
      961 ggaggacacg catgaacagg gtcatgaatc tggctggcgc gatcggcttg atcgcgccgc
     1021 tcgcgctcgc cgcagattcc gcgtcggcgg aggacacgct caaggtggtc atcgggcaga
     1081 tcaacaattg ggaaaaccag gcgccgacgc ttgggcagga cgcgggcatc ttcaagaagc
     1141 atgggcttgt gctcgaaaat accggcacgc agggcgctgg cgagacgatc caggcagtca
     1201 tctccggcag cgccgatatc ggcgcaggcg ttggtgctgc cggtgtgatg cgtgccttct
     1261 cgaaaggcgc gccggtgcgc attctggcgc ccgcctttac cggcaccggc gatctctatt
     1321 ggtacgtcaa gccagattcg aagattcaaa gtctgaagga taccacgccc gaaaacacga
     1381 tcgcctattc gaccaatggt tcgagctcgc acaacattgt cgtggccttc accagcgaac
     1441 tcggcgcgaa ggcaaagcca acggccaccg gtggccccgc tggaaccctc actgctgtga
     1501 tgtccggtca ggtcgacatt ggctgggcgg cgccgccgtt cgggctgaac gagatcaagg
     1561 a
//
LOCUS       DATDHO010000352         2676 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_460059, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000352 DATDHO010000000
VERSION     DATDHO010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_460059"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..646)
                     /locus_tag="VIY07_06810"
     CDS             complement(<1..646)
                     /locus_tag="VIY07_06810"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-32"
                     /protein_id="HEY6381501.1"
                     /translation="MARTAALPALKAESGLSHYLDEIRRFPMLEPQEEYMLARSWREH
                     GDREAAHKLVTSHLRLVAKIAMGYRGYGLPISEVISEGNVGLMQAVKRFEPEKGFRLA
                     TYAMWWIKAAIQEYILRSWSLVKMGTTANQKKLFFNLRKAKSKISALDEGDLRPEQVQ
                     TIAKRLGVTEQDVIEMNRRLGGDVSLNAPIREDGDSGEWQDWLVDESSSQEARLV"
     gene            complement(862..1884)
                     /locus_tag="VIY07_06815"
     CDS             complement(862..1884)
                     /locus_tag="VIY07_06815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEY6381502.1"
                     /translation="MTNSITETVTIADAEAGSRLDRVLAGRIATVSRSHLKALILAGQ
                     VKIAARTIRDPAATVKSGDVVTVTLPPPEPASPKGETIPLNIVYEDEAIIVIDKPKGL
                     VVHPAAGHASGTLVNALIAHCGASLSGIGGVKRPGIVHRLDKDTTGLMVIAKTDKAHR
                     ALAKQFAEKTEGPLRRGYLAFVWGAPDRPKGTIEAPIGRHPHARDKQAIRESGRPAVT
                     RWQALERFAGLDGKPIASLLACTLETGRTHQIRVHLAHIGHPILGDATYGTGFRTKAS
                     RLGPKARASLEALERQALHAYLLVVQHPGTSDILEFQSELPGDLRCLRDALHTESREA
                     GPEPRK"
     gene            1894..2229
                     /locus_tag="VIY07_06820"
     CDS             1894..2229
                     /locus_tag="VIY07_06820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381503.1"
                     /translation="MSDDPEKPLDPEAARIVAKVRRLMMIASVTTFIAVAVVIGVIGY
                     RVFKGEGRAQAGLDADAPWPNGARIVSSAMNDERLALTIETPNGLEVRFFDLRTFKPS
                     GRLPLGGKP"
     gene            2343..>2676
                     /locus_tag="VIY07_06825"
     CDS             2343..>2676
                     /locus_tag="VIY07_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HEY6381504.1"
                     /translation="MVDDPAKTNSVIVGKSAKYEVLDLHFGNRHGLVAGATGTGKTVS
                     LQVLAEGLSKAGVPVFAADIKGDLSGIAAEGEMKDALVERAKGMGLNYQPDQYPVVFW
                     DVFGEQGHP"
BASE COUNT          491 a          827 c          839 g          519 t
ORIGIN      
        1 cgacgaggcg cgcctcctgg ctcgaactct cgtcgacgag ccagtcctgc cactcgccgg
       61 aatcgccgtc ttcgcgaatg ggagcattga gcgagacgtc gccgcccagg cggcggttca
      121 tctcgatcac gtcctgctcg gtgacgccga ggcgcttggc gatcgtctgc acctgttcgg
      181 gccgcaggtc gccttcatcg agcgctgaaa tcttgctctt cgccttgcgc aggttgaaga
      241 acagcttctt ctgattggcg gtggtgccca tcttcaccag cgaccacgag cgcaggatgt
      301 attcctggat cgcggccttg atccaccaca tcgcataagt ggcgaggcga aaacccttct
      361 cgggctcaaa gcgcttgacc gcctgcatca gcccgacgtt gccttccgaa atcacttcgg
      421 aaatcggcag gccatagccg cgatagccca tggcgatctt ggcgacgagc cgcaaatgac
      481 tggtgacgag cttgtgcgct gcttcgcggt cgccgtgctc ccgccagctg cgcgccaaca
      541 tgtattcctc ctgcggttcc aacatcggga accgccggat ctcgtcgagg tagtgtgaaa
      601 ggccggattc ggccttgagt gccggcagtg cggcggtacg ggccatgaca gcgccctcct
      661 tacttgcccc cggtttacgg caggcggttg tcgccgccgc tccccgagcc gacggcgcgc
      721 attcaatgtt gcgactgcga aatccctcag tcgcaatcgc acaatagcta ctcgaccgca
      781 tgaaagatag cggtcggccc ctcacgtcac tgtgacgcgg tcatgcgccc agtacgtcgc
      841 caaaccattg atttggctgg tctatttgcg cggctcgggc ccggcttcac ggctctccgt
      901 gtgtagggca tctcgtaaac aacgcaaatc acccggcagt tccgattgga actccaggat
      961 gtcgctagtt ccggggtgtt gtaccactaa caaataggcg tgcagggcct gcctttcaag
     1021 tgcctccaag gaggcgcgcg ccttcggccc taaccggctt gctttggtcc tgaacccggt
     1081 accgtaggtg gcgtcgccca gaatggggtg cccaatatgg gcaagatgca cgcggatttg
     1141 gtgcgtgcgc cctgtttcca gagtgcaagc gaggagactc gcaatcggct ttccatccag
     1201 cccggcaaaa cgctcaaggg cctgccagcg cgtgacggcg ggacggccac tttcgcgtat
     1261 ggcctgcttg tcgcgcgcat ggggatgccg gccgataggc gcctcgatcg tgcccttcgg
     1321 gcggtccggt gcgccccaga caaaagcaag atagccgcgt cgcagcggtc cctcagtttt
     1381 ttcggcgaac tgcttcgcga gagcgcggtg tgccttgtcg gtcttggcaa tcaccatcag
     1441 gccagtggtg tccttgtcga gccggtggac aatacccgga cgcttgacac ccccgatccc
     1501 cgacaggctg gcgccgcagt gggcgatcag cgcattgacc agagtgccgg aagcgtgacc
     1561 cgcggccgga tggacaacca gtcctttcgg cttgtcgatg acaatgattg cctcgtcctc
     1621 gtagacgata ttgagcggga tcgtctcgcc ctttggcgag gccggttcgg gcggcggcaa
     1681 tgtcacggtg acaacatcgc cggatttgac ggttgccgcc ggatcgcgga tcgtgcgcgc
     1741 cgcgatcttc acctggccgg caaggatcaa ggccttcagg tgcgagcgcg aaacagtcgc
     1801 gatacgtccg gcaagcacac gatccagccg ggatcctgcc tccgcgtcgg caatcgtgac
     1861 tgtctcggta atgctattcg tcatggttca tgaatgtctg acgaccccga aaagcctctc
     1921 gacccagaag cagcccgcat cgtcgccaag gtgcgccggc tgatgatgat cgcaagcgtg
     1981 acgactttca ttgcggttgc cgtcgtgatc ggggtcatcg gctatcgtgt tttcaagggc
     2041 gagggaaggg cacaagcggg cctggatgcc gatgcgccat ggccgaatgg tgcgcgcatc
     2101 gtatcgagcg ccatgaatga cgagcggctc gcgctgacga tcgagacccc gaacgggctc
     2161 gaggtgcgct tcttcgatct gaggacattc aagccttccg ggcggctgcc gctcggcggc
     2221 aagccatagg tcgcggttgc agcgggcgtg gctgtgcatg ttaaaatgcc acctgagaaa
     2281 gtccccgcgt aggagacgtc atggcgaaaa ccaaaaagtc cgctcgggcg ccggcggcag
     2341 caatggtcga cgatcccgcc aagaccaact cggtcattgt cggcaagagc gccaaatacg
     2401 aagtgctcga ccttcatttc ggcaaccggc acggcctggt cgccggcgcg accggaaccg
     2461 gtaagacagt atcgcttcag gtgttggcgg aaggcctttc gaaggcgggc gtaccggtct
     2521 ttgccgccga catcaaaggc gacctgtccg gtatcgccgc cgaaggcgaa atgaaggatg
     2581 ccctggtaga gcgcgccaag ggcatgggac tgaactatca gccggatcag tacccggtgg
     2641 ttttctggga cgttttcggc gagcagggac atccca
//
LOCUS       DATDHO010000353         2054 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_165374, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000353 DATDHO010000000
VERSION     DATDHO010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2054)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2054)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2054
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165374"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..525)
                     /locus_tag="VIY07_06830"
     CDS             complement(88..525)
                     /locus_tag="VIY07_06830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381505.1"
                     /translation="MKKHLLAIAAWLSLFLALFVVSASAGTAKHLTITVPFDFKVEKT
                     TLPAGTYTIYRTATNDAHGFLIRDESGRAEVLFITHSVQTRDVPARGRLEFRRFGDQY
                     FLARFWWDGDNTGRELAYYHVELEIAGGPAEKVAPPEVISIAQ"
     gene            768..1337
                     /locus_tag="VIY07_06835"
     CDS             768..1337
                     /locus_tag="VIY07_06835"
                     /inference="COORDINATES: protein motif:HMM:TIGR02999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY6381506.1"
                     /translation="MATAGSQQITHLLLAWGDGDQTALEKLMPLVYEELRRVAARHMR
                     RQGPGHTLQTTALVNEAYVRLIDSSQVRWQNRAHFFAVSAQMMRRILIDFARSRRYLK
                     RGGGVHQVSLDETLAVAPERGSDLLELDEALTRLAALSGRQAQIVELRYFGGLSEEEA
                     AEALKISVRTVQRDWNLARLWLYRELSKK"
     gene            1409..>2054
                     /locus_tag="VIY07_06840"
     CDS             1409..>2054
                     /locus_tag="VIY07_06840"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: protein motif:HMM:NF012298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine-protein kinase"
                     /protein_id="HEY6381507.1"
                     /translation="MTPERWEQIGGLYEAAKELESSSERAAFLDQACAGDEALRREVE
                     SLLAAEQSVGGFITAPALRDAAQLLTGESPEAMVGKQLGHYQILSFIGAGGMGEVYAA
                     KDTRLGRRVAVKLLHASVSRDADRLRRFGQEAKTIGMLNHPNILTIHDVGTYEGSPYI
                     VSELLEGETLREQTKDGAIAPSRAADFALQITRGLAAAHERGLAHRDLKPENLFI"
BASE COUNT          421 a          589 c          631 g          413 t
ORIGIN      
        1 actgcgtgct gttccgaaaa agtaaggatt gcgactgaag tgcgaggtgg ttgggttttg
       61 ttccaccgcc ccaaccacct gtccctttca ctgggcgatg gagatgacct cagggggagc
      121 aaccttctct gccggacctc cggcgatctc aagctcgaca tggtaatacg cgagttcgcg
      181 accggtgtta tccccatccc accagaatcg cgcgaggaag tactggtcgc caaagcggcg
      241 aaactcgagt cgacccctgg ccggcacatc tctcgtctga accgaatgcg tgatgaagag
      301 cacctccgcg cggccgcttt cgtcgcgtat caaaaaacca tgcgcgtcgt tggtggcggt
      361 acggtaaatc gtataagtac cggccggaag cgtcgtcttt tccaccttga agtcgaatgg
      421 aacggtgatg gtcaagtgct ttgctgttcc cgccgaggcg gaaaccacga atagtgccag
      481 aaacaggctc aaccaggctg cgatagcaag taaatgtttt ttcattgacc cctcttgcgg
      541 ttagacaccg gcctggccgg cgtgcggttt ttgttgcgca gtggtcggcg aaccagctgc
      601 ttcctgaccg tgaggccggc cttgctccgg ctcactccat aagacgcgat ccgtcatcga
      661 aacccgccac gcccgcaaaa aatcttccta tcgcatcaac gtctcgaaga gagggttcgg
      721 cccgcttgtg gtaaattgtt gttttctatt gtctttcgag gcgaaagatg gcaacagccg
      781 gttcacagca aatcacgcat ctgcttctgg cctggggcga cggcgaccag accgcgcttg
      841 aaaagttgat gccgctggtc tacgaggagc tgcgtcgagt ggcggcgcgc cacatgcggc
      901 ggcaggggcc gggccacacg ctacagacta ccgcgttggt taacgaggcc tacgtgcggt
      961 tgattgactc aagccaggtg cgctggcaga accgcgcgca tttcttcgcg gtctcggcgc
     1021 agatgatgcg gcgcattctg atcgattttg cccggtcgcg ccgctacctc aagcgcggcg
     1081 ggggcgtgca ccaggtttca ctcgatgaaa cgctggcagt cgcgccggag cgtgggtcgg
     1141 atttgctgga gttagacgag gcacttacga ggttggcggc actcagtgga cgacaggccc
     1201 agatcgtgga gttgcggtac ttcggcgggc tgagcgagga agaggcggcg gaggcgctca
     1261 agatctcggt acgcaccgtg cagcgcgatt ggaaccttgc gcgtctctgg ctctaccgcg
     1321 aattaagtaa aaagtaaaaa atgctgagta aagagtggct cagcactttc tactttctac
     1381 tcagcacttt taacttttta cttggaacat gacgcctgaa cgctgggaac agatcggcgg
     1441 gctttacgaa gcggcgaagg agctcgagtc atcatccgag cgcgcggcct tcctcgacca
     1501 ggcttgcgcg ggtgacgaag ccttacgccg cgaggtcgaa tcgctgctcg cggcagagca
     1561 atcggtcgga ggcttcatca cagcgcctgc gttgagagat gcagctcagt tgctgaccgg
     1621 tgaatcaccg gaagcgatgg tcggaaagca actcggccac taccagatcc tctcgtttat
     1681 cggcgcgggc gggatgggcg aggtctacgc cgccaaagac acgcggctgg gtcgcagagt
     1741 cgccgtcaag ctgctgcatg cttccgtctc gcgcgatgcc gaccggcttc gacgcttcgg
     1801 gcaggaggcg aagaccatcg ggatgctcaa tcacccgaac atcctcacta ttcacgacgt
     1861 cggcacatac gaaggctcgc cgtacattgt ctcggagctg ctcgaaggcg agacgttgcg
     1921 cgagcagacc aaggacggag ccatagcgcc ctccagggcc gcggacttcg cattgcagat
     1981 cacacgggga ctcgctgcgg cgcacgaacg cgggcttgcc catcgagatt tgaagccgga
     2041 gaaccttttt atca
//
LOCUS       DATDHO010000354         4337 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_16927, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000354 DATDHO010000000
VERSION     DATDHO010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4337)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4337)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4337
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_16927"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            180..1730
                     /locus_tag="VIY07_06845"
     CDS             180..1730
                     /locus_tag="VIY07_06845"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4118 domain-containing protein"
                     /protein_id="HEY6381508.1"
                     /translation="MRDALKLDFIRNQLPGVFLTLGLVAILTAVLFTLVWEIGLAHGS
                     VLYLIPVVIAATRWGIVPAVVAAVCGVVASAFFFYEPAYSFRIKDPQEVIDLILFIFV
                     AVAVSQLATRLKRQLEMARQREIDMRDLYAFSRRLAVAFDVSDIHAAIEDHLASVMQR
                     NVVLFPGAREAANSSGRRAGVTVPERVLAEVVEVASGHRDTTGSMVTAATGEMWLVRA
                     VSPKSPEFGVIAINLGRESKERSDELRIRVDAVLSDATATLERLGVAHAISEARMRSQ
                     TDQLREALIGSVSHELRTPLASILGAATVLSAAPALRNEKKLTALVHDVRDEAERLNY
                     DIQNLLDATRISSDGVKPHSEWADPADIINSALERCRHRLADRRLTVDLPSDLPLIHV
                     DPVLVQQALIQIFDNAVKYSVSGSRIAVDASTRDGCLVISITDHGAGLTNAEKTKIWD
                     RFARGERHAATTSGSGLGLWIANAFVAANEGKVTAFSEGPGLGTRVTIELPVTQAAVP
                     QLESDTDE"
     gene            1723..2472
                     /locus_tag="VIY07_06850"
     CDS             1723..2472
                     /locus_tag="VIY07_06850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY6381509.1"
                     /translation="MSEPSPIVLVVDDEIQIRRFLRTGFELNGFVVHEAGTGAEAIRS
                     ATLRPIDLVIADLGLPDMDGAEVVERIRSWSTVPIIVLSVRSNEAEKVRLLELGADDY
                     VVKPFGMAELLARVRVALRRQMRAVSGEPTVKAGPLTIDLAARAVFLNDKRLTLTPKE
                     YRLLQVLAQHAGNVVTHQHLLKEVWGSIHVHDTHYLRIFVRKLRQKIEPHPDSPKILV
                     TELGVGYRLVQSGNEVEAPAWPDSTPAKTET"
     gene            2667..3146
                     /gene="rplU"
                     /locus_tag="VIY07_06855"
     CDS             2667..3146
                     /gene="rplU"
                     /locus_tag="VIY07_06855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEY6381510.1"
                     /translation="MFAVIRTGGKQYRVAAEDVIRVDRLNGQPGEIVEFGEVLVVGGD
                     APQLGTPTVAGATVAGEVLQHTRGDKVIAFKKRRRKNSRRKRGYRHEFSVIRITEILT
                     GGAKPSKTAAPRPRREPKPVETAAPEAEAKPAKTKAKKPAKAAAKKPAKGATKSKKK"
     gene            3200..3472
                     /gene="rpmA"
                     /locus_tag="VIY07_06860"
     CDS             3200..3472
                     /gene="rpmA"
                     /locus_tag="VIY07_06860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEY6381511.1"
                     /translation="MAHKKAGGSSRNGRDSAGRRLGLKSTGGEIVLAGNIIARQRGTK
                     WHAGRNVGTGKDHTLFALINGKVQFATKAKGRTYVSVVPMTEAAAE"
     gene            3598..4197
                     /locus_tag="VIY07_06865"
     CDS             3598..4197
                     /locus_tag="VIY07_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6381512.1"
                     /translation="MTLLEEIPREPYREGSIPVLETKRLALRAARLEDAKAVAALAND
                     RRIAENTARIPHPYKIADAEKFIGGANKDGEAAFLITLRDKTVIGACGIMFHFDDAPE
                     LGYWLGVPYWNQGYATEALHALIDYAFTDLSHEALQAGSRVTNPASRRVLEKCGFQWT
                     GVGLYRINSIKSSAPIDRFRLERRIWSALKTWGRMKKVM"
BASE COUNT          879 a         1353 c         1341 g          764 t
ORIGIN      
        1 cgataccctt gcgagtatgc cgcatttcga gtgcggtgct ttcaaccact cagccacctc
       61 tccggggccc gaaacgggcc tacaaagacc ctgaatggac cggcgctatg taaccaacgg
      121 cgccaagaca gacaagggtc gggcagcgta tattgcgcgc gcttgagtga acccgcccga
      181 tgcgtgacgc cttgaaactc gacttcatcc gcaaccagct gcccggcgtc ttccttacgc
      241 ttggtctcgt cgcgattctc acggcggtgc ttttcacgct ggtttgggaa atcgggcttg
      301 cccacggttc ggtcctttac ctcatccctg tcgtgatcgc ggccacccga tgggggatcg
      361 tgccagcggt cgttgcagca gtctgcgggg tggttgcctc cgcgttcttt ttctacgagc
      421 cggcctacag cttccgcatc aaggatccgc aggaagtcat cgacctgatc ctgttcattt
      481 tcgtcgcggt ggccgtgagc cagctcgcga cgcgcctcaa acgccagctt gaaatggccc
      541 gccagcgcga gatcgacatg cgcgacctct acgccttctc gcggcgcctg gctgtcgcgt
      601 tcgacgtctc cgacattcat gcggcaatcg aggatcacct cgcgagcgtc atgcaacgca
      661 acgttgtgct gttcccgggc gcgcgcgaag cggcgaacag cagcgggcgg cgcgccgggg
      721 tgacagtgcc agagcgggtt ctcgccgaag tcgtggaggt cgcatccggt caccgcgaca
      781 caacaggctc catggtgacg gcagctaccg gcgaaatgtg gcttgtgcgc gctgtctcgc
      841 cgaagagtcc cgagttcggt gtcatcgcca tcaatctcgg gcgtgaatcg aaggaacgtt
      901 ctgacgaact gcgcatccgc gtggatgcag tcctgtcaga tgcgaccgcg acgctcgaac
      961 ggcttggcgt cgcccacgcc atcagcgaag cgcgcatgcg ctcgcagacc gaccaattgc
     1021 gcgaggcgct gatcgggtcc gtcagccacg agctgcgcac gccacttgct tcgatcctcg
     1081 gcgcggcaac cgttctgagc gcggcaccgg cgctgcgcaa tgagaagaag ctgactgcgt
     1141 tggtacatga cgttcgcgac gaagccgagc ggctcaatta cgacattcag aatctgctcg
     1201 acgccacccg catcagcagc gatggcgtca agccgcattc cgaatgggcg gatccggccg
     1261 acatcatcaa ctccgcgctg gaacgctgcc gccaccgcct tgccgatcgg cgcctcacgg
     1321 ttgacctgcc gtcagacctg ccgttgatcc atgtcgatcc cgtactcgtg cagcaggcgc
     1381 tgattcagat tttcgacaac gcggtgaaat actccgtctc cggttcccgc atcgcggtcg
     1441 atgcaagcac gcgcgacggc tgcctggtca tcagcatcac tgatcatggc gctggattga
     1501 cgaatgccga gaagacaaag atctgggacc ggttcgcccg cggcgagcgg cacgcggcga
     1561 ccacgagtgg ctcggggctg ggactgtgga tcgccaatgc ttttgttgca gccaacgaag
     1621 gaaaggtaac cgccttcagc gaaggccctg gccttggcac cagagtgacc atcgaattac
     1681 cggtcacgca ggcagccgtt ccgcaactag agagtgacac cgatgagtga gccatccccc
     1741 atcgttctcg tcgtagacga cgagattcaa atccgccggt ttctgcgcac gggcttcgag
     1801 ctcaacggtt tcgttgttca cgaagccggg accggagcgg aagcgatccg ctcggcgacg
     1861 ctgcgcccga tcgacctggt catcgccgac ctgggcttgc ccgacatgga tggcgccgag
     1921 gtggtggaac gcattcggtc ttggtcaacc gtccccatca tcgtcttgtc ggtgcgctcg
     1981 aacgaagcgg aaaaagttcg tctgctcgag ctcggtgcag acgattatgt ggtgaagcct
     2041 ttcgggatgg cggagttgct ggcacgggtg cgcgtggcgc tgaggcgcca gatgcgcgcc
     2101 gtatcaggtg agccaaccgt caaagcgggc ccgctcacca ttgatctcgc tgcccgcgcg
     2161 gtgttcctga acgacaaacg cctgacgctg acaccgaagg aataccggct gctgcaggtg
     2221 ctcgcccagc acgcgggcaa cgtggtcacc caccagcatc tgctgaagga agtctggggc
     2281 tcgatccacg tgcatgacac tcattacctc cgcattttcg tgcgcaagct gcgccagaag
     2341 atcgagccgc atccggactc gccgaagata ctcgtgaccg agttgggcgt cggctaccga
     2401 ctggttcagt cgggcaatga agtcgaggct ccggcctggc ccgattcgac gcccgcaaag
     2461 accgaaacct gatggcgatg gcagttgttc gaacagcctt ccttgacaga atgagtgttt
     2521 ccccgccata agcatgtcgc gcgggccctt gggtccgcgc gctttttcga gggccgatca
     2581 agcccttcaa aacaaacgac aaaaccgact gaaagaagcc ggtccggatt atccgagcac
     2641 cgggatcgaa cacacgagga cgaaagatgt tcgcagtcat caggacaggc ggcaaacagt
     2701 atcgggtcgc cgccgaggac gtgatccggg tcgaccggct caacggccag cccggcgaga
     2761 tcgtcgagtt cggcgaggtg ctggtcgtcg gcggcgacgc gccgcagctc ggcacgccaa
     2821 ccgttgcagg cgccaccgtt gccggcgagg tgcttcagca tacgcgcggc gacaaggtga
     2881 tcgcgttcaa gaagcgccgg cgcaagaatt cacgccgcaa gcgcggctat cgccacgagt
     2941 tttcggtgat ccgcatcacc gaaattctca ccggcggggc caagccgtcg aagacggcgg
     3001 cgccgcggcc caggcgcgag ccgaaaccgg ttgagaccgc agctccggaa gcggaggcaa
     3061 aaccggccaa aaccaaggca aagaagccgg ccaaagcggc cgcaaaaaaa cccgccaagg
     3121 gcgctacaaa gagcaagaag aagtgagatg attccttcac ggaatcggtg tacagactaa
     3181 gagaattcga gaaaccacta tggcgcacaa gaaggcaggc ggatcttcac gaaacggccg
     3241 cgactccgcg ggccggcggc tcggcttgaa gtcgaccggc ggcgagatcg tgcttgccgg
     3301 caatatcatt gcgcgccagc gcggcaccaa atggcacgcc ggccgcaatg tcggtaccgg
     3361 caaggatcac accctcttcg cactcatcaa tggaaaggtt cagttcgcaa cgaaagcaaa
     3421 aggccgcacc tacgtgtcag tcgtaccgat gacggaggct gcggccgaat aagacggtgg
     3481 acataacgag gtccgccggt cattccagtc aaaccggcgg ggccttgtaa ggctctgaga
     3541 gggggagacg ggtgaccggc tccccctctc aacttttcaa aacctggagc ctgtaccatg
     3601 acactactag aggaaattcc gagagagcct taccgcgagg gaagtattcc cgtcctcgag
     3661 accaagcgcc ttgccttgcg cgcggcgcgc ctcgaggacg ctaaagcggt agcagcgctc
     3721 gccaacgacc gccgtatcgc agaaaacacc gcgcgcattc cgcatccgta caagatcgcg
     3781 gatgccgaga agttcatcgg tggggcgaac aaggacggcg aggcagcatt cctgatcacg
     3841 ctgcgcgaca agaccgttat cggcgcgtgc ggcatcatgt tccacttcga cgatgcaccg
     3901 gagctcggct actggctcgg cgtgccgtac tggaatcagg gctacgccac cgaggcgctg
     3961 catgcattga tcgactacgc cttcaccgac ctttcgcacg aggcgttgca ggccggatcg
     4021 cgggtgacca atccggcttc gcgtcgggtg ctggagaagt gcggattcca gtggaccggc
     4081 gtcggtctct atcgcatcaa ctcgatcaag tcgtcggcgc cgatcgatcg cttccggctt
     4141 gaacggcgca tctggtcggc gctcaagacc tggggccgga tgaagaaggt gatgtgagca
     4201 gtctttctcc gttcattccc tccccgccca cgcgggggca ggctccagcg ggaagcccag
     4261 agaacacatt gtatctctgg gtccccactt tcgcggggac gaacggaaga tggccttaaa
     4321 tccagattcg tgggtgg
//
LOCUS       DATDHO010000355         2602 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_265050, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000355 DATDHO010000000
VERSION     DATDHO010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2602
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265050"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..860
                     /locus_tag="VIY07_06870"
                     /pseudo
     CDS             1..860
                     /locus_tag="VIY07_06870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157391.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
     gene            1565..1750
                     /locus_tag="VIY07_06875"
     CDS             1565..1750
                     /locus_tag="VIY07_06875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381513.1"
                     /translation="MPDLIRIFTERGDLAHLALLLWATSASALAWFVLRELAAASRRF
                     DDFVRELARFNELFGDH"
     gene            1750..1911
                     /locus_tag="VIY07_06880"
     CDS             1750..1911
                     /locus_tag="VIY07_06880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381514.1"
                     /translation="MINRNSGSRSGRRETEERRDHLDIFREFLDHLGRVSRERSDKTS
                     PREDLRIQR"
     gene            2024..2515
                     /locus_tag="VIY07_06885"
     CDS             2024..2515
                     /locus_tag="VIY07_06885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA];
                     GO_process: GO:0019082 - viral protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEY6381515.1"
                     /translation="MLAPTFEPTVASVFAPRTTIDACGSVEGYASLFGEIDHARDMVM
                     RGAFAETLATRGIRRIPMLFQHDPSEPVGIWLELREDHRGLFARGRLIPEVARGRELL
                     SLLRAGAIDGLSIGFRTAKARIDPRTRIRRLYAVDLWEISIVTFPMLAEARVRNVKCS
                     NRK"
BASE COUNT          500 a          767 c          774 g          561 t
ORIGIN      
        1 aatgcctata tcgaggctgt cggtccgggc aacgagagtc tccaggtgcg cgagctttat
       61 gcactgcggc ccgaccgaat gaaactggtg cctggctcgg acggttggcc acgggcctac
      121 gaatatacgg tcgccggttc gacgatgcgt tttgatcaaa gcgcagcctt gccgccgatt
      181 ttgcatctca cgtttttcaa tccactcgac gatcactatg gcctgagccc gcttgaagcg
      241 gccgccatgg ccgtcgacac ccacaacgcc gcggcttgct ggaacaaagc gctgctcgac
      301 aacgccgccc gtccttccgg cgcgctcgtt tacgacggcg gcgagggcgc tgttctgtcg
      361 acgctgcaat atgagcgttt gaagcgggaa tttgcagatc attatcaagg ccacggcaat
      421 gccgggcgac cactcgtgct cgaagggggc tcgattggag gccgatgtcg ttaaccccgc
      481 gggatatgga ttttctagaa gcaaaacacg ctgccgcacg ggagattgcg ctggcgttcg
      541 gggtgccgcc aatgcttctc gcaattcctg gcgataatac atattccaat taccaggaag
      601 ccaatcgtgt gttctggcgt caaagcgttc tgccgctcgc ctctcgcatc acctgcgcgc
      661 tcacgcattt gctggcgcca gtctttggtg aagggttcgt attggccgcc gacattgacc
      721 ggatcgaggc actgagcgcc gaccgcgcgg cgctgtggga ccgcgtgaac aaagcgcaat
      781 tcctcagcgt caacgagaag cggctcgctg tcggctacgg cgccatcgaa ggtggggacg
      841 tgttccgtcc gccgcattag gaacaaacat tggccgctcg ccgtttcttc tggtgacgca
      901 ggggggcgag ctcaatggaa ctcaaggtgg aactccgatg acctggaaaa cagcgtccaa
      961 agacgacgcg gccggggaag atcgcgaacg agaccctgcc ggttctgcaa aagcatccgc
     1021 agacggcgca atctctcgcg cagaaataat cctcttgagg agggtcggca ggtattgcag
     1081 ctgatccgga tgacgcccgg ttgcaggtcc ccgcaatcgg gcgtcatttt tttgtaaaca
     1141 gttcagatat ctagaatctc gcggggtttg cccaacgcgc tttgaattcg cgcattgcct
     1201 gctcgcagct tacggcgtag ccgcgatttt gcgcactctc cggtcgtgca gtaatctccc
     1261 acagccacgg catgccttga gggccttgcg cggtaagcac gatacggccg acccgtcgat
     1321 tgccttccaa tacgtcgtat tcatcggcgg accattcccc ctcacgcgtt ttgaccgcgc
     1381 gtgtgaggct cagcttgctt gcgtcgctga aagcgcttgt tcctgaagtc cgcgagtgct
     1441 tcgggcctcc acgtaggggc aggaaaaaag ggccatcgtg gtccgatgaa ctcatggcgt
     1501 tgaatcatac cagcttatcg aacccgccgt cccgctttgt ttgcccagga gccgacttgt
     1561 tctgatgccc gacttgattc gcattttcac tgagcggggt gacctcgcac atctggccct
     1621 gctgttgtgg gcgacgtcgg caagcgcgct tgcctggttc gtactgcgcg agctggctgc
     1681 cgccagccgc cgcttcgacg atttcgtacg cgagctcgcg cgcttcaacg agctttttgg
     1741 agatcattga tgatcaatcg gaatagtggg tctcgctcgg gccggagaga gaccgaggaa
     1801 cgacgagacc atctcgatat ttttcgcgaa ttcctcgacc atctcggtcg tgtctcgcgc
     1861 gagcgaagtg acaagacatc cccgcgggaa gacctgcgca tccagcgcta gttactgcct
     1921 ctaaccaccc cggccggagc ttgagccggc catccatgac gcccacggca agctgatgct
     1981 ccgcgggcaa cagtcatgac ttgccagaga acgagatcag gaaatgctcg cacctacgtt
     2041 cgaaccgacg gtggcgtccg tttttgcgcc tcgcaccact atcgatgcgt gcggaagcgt
     2101 cgaaggttac gccagcctgt tcggcgagat cgaccacgcc cgtgacatgg ttatgcgcgg
     2161 cgcgtttgcc gagacgctcg ctacgcgtgg gattcgccgc attccaatgc tgtttcagca
     2221 cgatccttcc gaaccagtcg gaatctggct tgagctgcgc gaggatcacc gcggactttt
     2281 tgcgcgcggc cgtctcatac cggaggtcgc gcgtggacgc gaactgctgt cattgctgcg
     2341 cgcaggagcc atagatgggt tgtcgatcgg tttccgtacg gcaaaagcac gcattgatcc
     2401 gaggactcgc atccgccgac tttatgcggt ggatctttgg gagatctcca ttgttacgtt
     2461 ccccatgctg gcggaagcgc gcgtgcgaaa tgtgaagtgt tcgaaccgca agtagtgcat
     2521 ggcgattttt caaattcagc gtaagatgta ttttcgagga ggttggcact ctctgcaaat
     2581 gctcaagggc cgcgcgaaac gc
//
LOCUS       DATDHO010000356         4124 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_17063, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000356 DATDHO010000000
VERSION     DATDHO010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4124)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4124)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_17063"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(8..298)
                     /locus_tag="VIY07_06890"
     CDS             complement(8..298)
                     /locus_tag="VIY07_06890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007566791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEY6381516.1"
                     /translation="MATTETGIASVYSGEKTANGEYAHAHALTAAHKTLPFGTKVKVT
                     NVHNGRSVIVRINDRGPYIKGRIIDLTPAGARAIGSAGLAQVELTVLASNAS"
     gene            complement(644..1534)
                     /locus_tag="VIY07_06895"
     CDS             complement(644..1534)
                     /locus_tag="VIY07_06895"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY6381517.1"
                     /translation="MRYARSILAAIFVVLLLAGEAGAAATTSRSSLCLMQESAARANG
                     IPTGFLVRVIWRESRFDPHAIGPRTRSGAHAQGIAQFMAGTAAERALTNPFDPVQALP
                     KAAEYLRELRDEFGNLGLAAAAYNAGPGRVRGWLEGARTLPDETQRYVQAITGRSVAD
                     WARAGSVSMVAPEVDCLELVASLEQGPSSFFYELEERITAAIGLPWGVELVASFSRDR
                     VLATYARLMEKLSGLIGEHDPIITVALLRSRGTRPFYQARIGAESRISANGICKQVKS
                     TGVACLVLRNKQSSIQKDQP"
     gene            1645..2682
                     /locus_tag="VIY07_06900"
     CDS             1645..2682
                     /locus_tag="VIY07_06900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6381518.1"
                     /translation="MIFRQLFDQVSSTYSYLLARRPGGEALVIDPVLEKVDRYLHLVH
                     ELDLKLVKAVDTHLHADHITGLGALRDHTHCITVMGEQTKADVVSMRLSDGDKLTIEG
                     LTLHAIYTPGHTDDSYCFVLPDRVFTGDTLLIRGTGRTDFQNGDARQQYESIFNRLLK
                     LPDSTLVYPAHDYKGDTVSTIGEEKSFNPRLQVKSVDEYVELMSNLKLPNPKMMDIAV
                     PANIKIGLAQGKIALRGWAMAASGAIALVGKPDVALIDLREHSERERHGTIPGSLHVP
                     YPALQENISEGGMLSELAKATGKRLLFYCAFGERSAMAVQAAQDAGLTSACHIEGGID
                     AWKRVGGPLAR"
     gene            3779..>4124
                     /locus_tag="VIY07_06905"
     CDS             3779..>4124
                     /locus_tag="VIY07_06905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381519.1"
                     /translation="MRTFFLYFRSALRMFASAFAGLIDLDSLAADDSGGLAFVQVLTG
                     LFGGLHAFDTFGGLDILGALARLNSLDALGLDALDALNWFSSLAALQVFAAEISKLLL
                     KLGILELHAAVMR"
BASE COUNT          848 a         1181 c         1148 g          947 t
ORIGIN      
        1 gtaccggtca gctcgcgttg ctggccagca ccgtgagttc gacctgcgcg agaccggccg
       61 acccgattgc gcgcgcgccg gctggcgtaa ggtcgataat ccggcccttg atataaggcc
      121 cacgatcatt gatgcggacg atcacggaac ggccattgtg cacgtttgtg acttttacct
      181 tcgttccaaa tggaagcgtc ttatgcgccg ctgttaacgc atgggcgtgc gcatattcgc
      241 catttgccgt tttctctccg ctatagaccg aggcaattcc cgtttcggta gtcgccataa
      301 cttgcgaaga cgctgtaaac attcccactg aagcaagaac acaaagcatc acgcgacaac
      361 gatttctcat tctctccgct cataagttgt tggggatacg caccgaccga cggcacggcg
      421 ccggccgaag cggattgact tctataagcg gagttcgcga acgtcttgtt gcaatatgcc
      481 aagagattgt tgacgcgtgc cagcttgtcg cgattttgaa aaatcaccgg ccgcgccaga
      541 aattcttatt cgaaagaaga atgtgttcga gttggcgagg tattcgaata aaccgaagac
      601 attttgttac aaggaagaga tgcgctggag caacgcaacg aaactacggc tgatcttttt
      661 gaatacttga ttgcttgttt cgcaggacga gacacgcgac accggtgctt ttaacttgct
      721 tacaaatacc gttcgcagat attcggctct cggcgccaat tctggcttga taaaacgggc
      781 gcgtaccgcg gctgcgcagc agcgcgacgg taatgatggg gtcatgttcg cctatcaatc
      841 ctgatagttt ctccatcagc cgcgcatagg ttgcgagcac gcggtcacgc gaaaaactcg
      901 ccaccagctc cacgccccat ggtaggccaa tcgccgccgt tatgcgttct tccagctcgt
      961 agaaaaaact gcttggcccc tgctccagcg aggccacaag ttcgagacag tcaacttcag
     1021 gcgcaaccat cgaaacactc cccgcacgcg cccaatccgc gacacttcgt cctgtgatcg
     1081 cctgcacata acgctgggtc tcatccggaa gtgtgcgcgc gccctcaagc cagccgcgaa
     1141 cgcggccagg accggcgttg taggctgcag ctgcaagccc gagattgccg aattcgtcac
     1201 gaagctcgcg caggtattcg gctgcctttg gcaatgcctg aaccggatcg aagggattgg
     1261 tcagagcgcg ctcggcggcc gtgcccgcca tgaactgggc aatgccttgc gcatgcgcgc
     1321 cacttcgggt tcgcggcccg attgcatgag gatcaaacct gctttcgcgc cagatgaccc
     1381 gaaccaagaa tccagtcggt atcccattcg cccgggcggc cgattcctgc atcaaacaaa
     1441 gcgaggaacg cgaggtcgtt gccgcggccc cggcttcgcc cgcaagcagc agcacaacaa
     1501 aaatcgcggc caaaatcgag cgggcatacc gcatcgcgat ggaaaaaccg acggatgcaa
     1561 ttcgttccag tctaggcccc gagattatgg gcgggtagtg ccgccggatt gcctcatgct
     1621 cccaatccgg aatacgattt taagatgatc ttccgtcagc tgttcgacca agtgtccagc
     1681 acttattcct atctgctcgc gaggcgtccg ggcggtgaag cactggtcat tgatcctgtc
     1741 ctggaaaagg tggaccggta tctccacctc gtccatgagc tcgatctcaa gctggtgaaa
     1801 gccgtcgata cgcacttaca tgccgaccat atcaccgggt tgggcgcact gcgtgatcac
     1861 acccactgca tcacggtgat gggcgaacag acgaaggctg atgttgtttc aatgcgcctg
     1921 tccgatggtg acaagcttac gatcgagggg ctcacgctcc acgcgatcta cacgccgggg
     1981 cacactgacg attcctactg ctttgtcttg ccggaccgtg tattcaccgg ggatacatta
     2041 ctcatccgcg gtaccggccg aactgatttc cagaacggcg atgcgcgcca gcagtacgaa
     2101 tcgatattca acaggttgct gaagttgcca gattcaactc tggtttatcc ggcgcacgac
     2161 tacaagggcg acaccgtctc caccatcggc gaggaaaaat ccttcaatcc gcggctgcag
     2221 gtcaaatcgg tcgacgaata tgttgagctg atgagcaatc tcaaacttcc caacccgaag
     2281 atgatggaca ttgcagttcc tgccaacatc aagattggcc tcgcgcaagg gaagattgcc
     2341 cttcgcggct gggcgatggc agcgagtggc gcgatcgcgc ttgtaggaaa gccggacgtc
     2401 gcactaatcg acttgcgcga acattcggaa cgcgagcgcc atggcacaat cccggggtct
     2461 ctgcacgtgc cctacccggc cctgcaggaa aacatcagcg aaggtggcat gctgagcgag
     2521 cttgccaaag cgaccggtaa acgtcttttg ttctattgcg cgttcggcga gcggtcagcg
     2581 atggccgtgc aggcggcgca ggacgccggt cttacttcag cgtgtcatat tgaaggtggc
     2641 atcgacgcct ggaaacgggt tggtggaccg ctggcgcgct aacttgtgct atgtccagtt
     2701 cgatttgcga aattgcttta aatagcccga tcgctgtcac cgctgcttgg ttgaagtcgt
     2761 tgttgtcgaa cgaatgtttc cccaaggatc attcgatttt ttctgatcgg gaattttttc
     2821 catcgtcgac ttgtaggctt catcgatggc ttttcgcttt gcttgttcgt ccgggtccag
     2881 aggtcgtcga gcatccggct gcagacttat gcctggcttg agatcctgcg cagacgtcgg
     2941 cccgcttgaa aacaggatga ttgcgccggc caaacaaata tacctgctgt aagccatgcc
     3001 ccaactatgc ggcaaagctg gcggtaccgc cagagggtcg gcgacaaacg tgcgaatcta
     3061 ggccgggcgc gatccgcctt tatcggttgt atcgatgata ccgataactt caccggtaac
     3121 agggtcaatc cgtctcactg gggatgccgc cccttgcgag ccgaacagtc gctcgaaggc
     3181 acgtttgtat tccgctgtcg ccgccgcccg ataacctggc gctcgccgct ttgcttcggg
     3241 cttgcgacga cggtttttgt tgagaaaaag tgatggccgc atgtgtgttg atttccatca
     3301 aaccgcggag gtagcaactt cagtcaatgc aaaattgcgc aatcggactt ggttgcggtg
     3361 tccggccgcg gcgagttcaa gcatgcgcgc tgcaagcgct gtccggctta cgcgcgcctg
     3421 tcgtttcggc tgcaaacaag cccacgtgtc gtcgaatgtt atttgtaaga ttttcaggat
     3481 atcaggatca aacgcggacg cttgacgcat tgcacatcaa cctaattgtc cccgcatttg
     3541 actttgtgcc aaacactctg gctcgtctgt ccgctagctg acacagccgc acggaatatt
     3601 ttcactcaag ggtggaaccg tttgcgaatt ggcgcacttg ctcagtgacc gagcgcggac
     3661 cccctagccc ccttaccccc caaggtcccg cacggtcaga tgggcgagag ggccgcgcgg
     3721 ttcgcgcggc ccgtgagcat ttgcagagag tgccaaccgt tcaggcgggc gacggtcagt
     3781 gcggaccttt tttctttatt ttcgctccgc cctgcgcatg tttgccagcg cttttgccgg
     3841 gctgattgat ctggattcgc tggctgctga cgactctggt ggtcttgctt ttgttcaggt
     3901 tctgaccggt ctttttggag gtctgcacgc cttcgacacg tttggcggtc tggatattct
     3961 gggcgccctt gcccgtttga attccctgga tgctcttggt ctggacgcct tggatgccct
     4021 gaattggttt tccagtctgg ctgccttgca ggtttttgcc gctgagattt ccaaactgct
     4081 gctgaagctt ggtattcttg aactgcacgc cgccgtgatg agac
//
LOCUS       DATDHO010000357         1681 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_165651, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000357 DATDHO010000000
VERSION     DATDHO010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1681
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_165651"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..462
                     /locus_tag="VIY07_06910"
     CDS             <1..462
                     /locus_tag="VIY07_06910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEY6381520.1"
                     /translation="TENEHRDHILKISRVPAKVTPALAREARLVATRIARAFDYVGVL
                     AVEMFVVRAGRRRTVLVTENAPRVHNSGHWTIDAATVSQFEQHIRSVAGWPFAKPLRL
                     GRKVEILNLIGAEVNDAARWLTVPGTSVHIYGKGEAQPGRKMGHVTRIWPR"
     gene            690..971
                     /gene="rpsU"
                     /locus_tag="VIY07_06915"
     CDS             690..971
                     /gene="rpsU"
                     /locus_tag="VIY07_06915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEY6381521.1"
                     /translation="MQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKA
                     REKAEAIRRARKLARKKMQREGLLPTKPRPTPGAGPGGGGGYHRGPRMG"
     gene            complement(1039..>1681)
                     /locus_tag="VIY07_06920"
     CDS             complement(1039..>1681)
                     /locus_tag="VIY07_06920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381522.1"
                     /translation="AEPVRHIGIHVQPFYEAALTPDGRPQVSVGKQYSALLGSNRRED
                     IIAARDLITARPGVVTPMTMMVLAIRLYDVGLRDEAVFWFYVAKERYIVMSEVLNVKT
                     PALAQADDAVRSFATLAGPIINGYAFCDLARQKEQHAKAVEWVEANPYEVMFMASAPA
                     LPGDRAANARRAIANAKERGARERAYFDDVKVREAYYATRKQNDADAKFCWRD"
BASE COUNT          341 a          512 c          510 g          318 t
ORIGIN      
        1 accgagaacg aacaccgcga tcatattttg aaaatctcgc gagtgccggc aaaagtgacc
       61 cctgcactcg cccgcgaggc gcgcctggtc gccacccgca tcgccagggc attcgattat
      121 gtcggggtgc tggcggtgga aatgttcgtc gtcagggcgg ggcgtcggcg gacggtgctg
      181 gtgactgaga acgctccgcg cgtgcacaat tctggccact ggactatcga cgccgcgacg
      241 gtatcacagt tcgagcaaca catccggtcg gtggcaggat ggccgtttgc caagcccctt
      301 cggcttggcc gcaaggttga gatactgaac ctgatcggcg ccgaagtgaa cgatgccgct
      361 cgatggctca cggtgccggg aacgtccgtg catatctatg gcaaggggga ggcccaaccc
      421 gggcgcaaaa tgggacacgt cacgcggata tggccacgct gacactctga aacggtcccc
      481 gtagcgcgac cgcgggcatt tgcgacgaaa tctataatcg tcatcggcgg ttatgcggtc
      541 cgggcggccg cgcattgtat cttggctcga agccgacggt ttgctcgaat ggactcttaa
      601 cgccttttct gctagagccg cgcgactcaa agccccgcct gcggggccct tttaacttaa
      661 cccgtcggac tcacaacgaa ggagcaagcg tgcaagttct cgttcgcgac aacaacgttg
      721 accaggccct caaggcgctg aagaagaaga tgcagcgcga ggggattttc cgcgagatga
      781 agcttcgcgg ccactacgag aaaccatcgg aaaaaaaggc gcgggaaaag gcggaagcga
      841 tccgccgggc ccgcaagctc gcgcgcaaga agatgcagcg cgaaggtttg ctgccgacca
      901 agccacgccc gacacccgga gccggcccag gcggcggcgg aggctatcat cgcggtccgc
      961 gcatgggctg ataatctaga ttttctcgaa tttccgaggc gcgggcccaa gtcgcccgcg
     1021 ccattgtttt ggggccgact agtcccgcca gcagaatttg gcatcagcgt cgttctgttt
     1081 gcgcgtggca taatacgcct cgcgtacctt gacgtcgtcg aaataagcgc gctccctggc
     1141 gccgcgttcc tttgcgttgg caatcgcgcg tcttgcattt gcagcgcgat cgccaggcaa
     1201 ggccggtgcc gatgccatga acatcacctc ataagggttg gcttccaccc actcgaccgc
     1261 ctttgcgtgc tgctctttct gtctcgcgag atcgcagaag gcataaccgt tgattatcgg
     1321 cccggccaat gtcgcaaagc tgcgtactgc gtcatcggct tgcgcaagcg caggcgtctt
     1381 cacgttcaac acttccgaca tcacgatgta tcgttccttg gcgacgtaga accaaaatac
     1441 cgcctcgtcg cgcaagccga cgtcatagag cctgatcgcc agcaccatca tggtcatggg
     1501 cgtaaccacg cccggcctcg cggtaatcaa gtctcgcgcg gcaatgatgt cctcgcggcg
     1561 gttggagccg agcagagcgc tgtattgttt gccgacggaa acctgcggcc tcccatccgg
     1621 cgtgagcgcg gcttcataga aaggctgcac atgaatgcca atgtggcgaa ctggctcggc
     1681 a
//
LOCUS       DATDHO010000358         3420 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_265167, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000358 DATDHO010000000
VERSION     DATDHO010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3420
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265167"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            330..1907
                     /locus_tag="VIY07_06925"
     CDS             330..1907
                     /locus_tag="VIY07_06925"
                     /inference="COORDINATES: protein motif:HMM:NF012312.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381523.1"
                     /translation="MIALIAAGYFFDVIDFTIFGSLVPYILSSKFASGAEVALVGAAT
                     IFGMFIGTAGQGQFSDRFGRRFIYQFNLLLFGVFTILGALAPNVTMLVICRFIAGIGL
                     GAEQPLAFAYAGEYSPKRIRGRILAIVHFIGGACVWPIGTALVLLLGTTIFPTSPDTV
                     WRAAWLIIGVGALIVWVFRFTLPESPRYLATHGRGQEALDVLKRLDIPSVPALSTLST
                     DAASNTKSDPFAVVFRMFPRRVIAGMICFTAFFGVAVGLGAWLPNMMNEKGFTITKSL
                     QYTLAMNFAVPCASIFMMYALDKWGRKITSVCAFIGAAIMAVVFANAGAPMELMVAGF
                     IMVFFIQVAGNAMQIFTSEVFPTNARASGFGWAAGVGRLATAFIMPSILLIQQTYGLM
                     TVFVCLAILLLIAAASVTQLGPEAKQRGLDEIAPPTRRLIEADNAFWLTLSGAVCVLL
                     SVSWWLYFYLAAKQISSTLVCLLYTNDTCQQLVSAATAAGKVGYYPFLTWIGLALILA
                     GVFMTMRKPAAVEKKAA"
     gene            1979..3214
                     /locus_tag="VIY07_06930"
     CDS             1979..3214
                     /locus_tag="VIY07_06930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381524.1"
                     /translation="MNSPEGATASNIRFLSSNDQGGRPDGVQVMLHKGHAFIGHMFSD
                     GYSVVDVRDPLNPKTVAFVGAPKNTRSHHLQIHDDILLAVNGPNIWAMQQYATQQDYY
                     AKSLIDSVQTEQPFAAGLRVFDVSKPASPREIAFLHIPGFGAHRIWWVGGRHAYASVH
                     FEGFIDHALAVIDVSDPARPALVGRWWLPGMNRAGGETPPASFGKRTALHHLISAGSL
                     GYAAWRDGGFTVHDLSDPPNPKLISHRNYAPPFAGGAHTPLPLANRNLLVLADEATSA
                     NCANGLAYTWLIDVREPSNPVSIATLPTPAEEDFCAKGAKFGPHNLHENRPGSMQTED
                     LIFATYHNAGLRIYDIRDAFAPKQVGYYVPPAPEKIVDQRPNPARVIQSCDVFVDPNG
                     MMYLTDTNAGLYILQYEGQ"
     gene            3229..>3420
                     /locus_tag="VIY07_06935"
     CDS             3229..>3420
                     /locus_tag="VIY07_06935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381525.1"
                     /translation="MSNRFGRLALHMWTIDTTPLDTALDAAKQAGFDAVELRRIDFKR
                     CFEAGMSNAQVLDLIKKNGI"
BASE COUNT          614 a         1107 c         1017 g          682 t
ORIGIN      
        1 atggcaatcc tttgggcctc catggtattg tcgtcgttct tccgggcgaa caacaacaac
       61 ccggcaatac cgaactgaag acctcgataa acggccgtcc cttccccaaa tttcgcaggc
      121 cgaaatcgcg agacgttcgc accaggaaca gttgtccgca actccccaaa ttgactggcc
      181 aatcctcaat ttctggctca tcctatcgac ggttgctggg tgaccgccaa aaaaacaggg
      241 acgagggagg aatagccgtg gctcagacca tagaggcata cgtcggcaat tcgctcgacg
      301 aagcgaagat atcgccgctt caccgcagag tgatcgcgct gatcgcggct ggatacttct
      361 tcgacgtcat cgatttcacc atcttcggct cgctcgtgcc gtatattctg tcgtcgaagt
      421 tcgcgagcgg cgcagaggtc gccctggtcg gcgccgcgac catcttcggc atgttcatcg
      481 gcaccgcggg ccagggccag ttcagcgacc ggttcggccg ccgcttcatc tatcagttca
      541 acctgctgct cttcggcgtg ttcaccatcc tcggtgcgct cgcgccgaac gtcacgatgc
      601 ttgtcatctg ccgtttcatc gcgggcatcg gtcttggggc cgagcagccg ctggcgtttg
      661 cctatgccgg cgaatattcg cccaagcgaa tccgcggacg cattctcgcg atcgtgcatt
      721 tcatcggcgg cgcctgcgtg tggccgatcg gaacggcgct ggtgctgttg ctgggcacga
      781 caattttccc cacctcgccg gacaccgtct ggcgggccgc gtggctcatt atcggcgtcg
      841 gcgccctgat cgtatgggtg ttccgtttca cgctgccgga gtcgccgcgc tatctcgcga
      901 cgcacggccg cggccaggaa gcgctcgacg tgctcaagcg actcgacatt ccgagcgtgc
      961 cggcgctcag cacgctctcg accgatgccg ccagcaacac caagagcgac cccttcgcgg
     1021 tcgtgttccg gatgttcccc aggcgcgtca tcgccggcat gatctgcttt accgcgttct
     1081 tcggtgtcgc cgtcggcctc ggggcgtggc tgccgaacat gatgaacgag aagggcttca
     1141 cgatcacgaa gtcgcttcaa tacaccctgg cgatgaattt cgcggtgccc tgcgcgagca
     1201 tcttcatgat gtacgcgctc gacaaatggg gccgcaaaat cacctcggtc tgcgcgttta
     1261 tcggcgccgc catcatggcg gtcgtgttcg cgaatgccgg cgcgccgatg gagttgatgg
     1321 tggccggttt catcatggtg tttttcatcc aggtggccgg caacgccatg cagatcttca
     1381 cgtcggaggt gtttccgacc aacgcgcgcg cctcaggctt cggctgggcc gccggcgtgg
     1441 gtcggctggc gacggcattc atcatgccgt cgatcctgct gatccagcag acctatgggc
     1501 tcatgaccgt gttcgtttgc ctggcgatcc tgctgctgat cgccgcggca tcggtcaccc
     1561 agctgggccc cgaggcgaag cagagaggcc ttgatgaaat cgcgccaccg acgcgccgtt
     1621 tgatcgaggc cgacaatgcc ttctggctca ctttgagcgg cgcggtgtgc gtgttgctgt
     1681 cggtgagctg gtggctctac ttctatctgg ccgccaagca gatctcgagc acgctggtgt
     1741 gcctgctcta caccaacgac acctgccagc agctggtgag cgcagcaact gccgcgggca
     1801 aggtcggcta ctacccgttc ctgacctgga tcgggcttgc cctgatcctt gccggcgtct
     1861 tcatgacgat gcgcaagccg gcggcggtgg aaaaaaaggc ggcctgaacc ggcagcatca
     1921 cctgatgggg cccggttggc gttaagtcgg ccgggccccg aaatttgcga gctctgtgat
     1981 gaattcgccc gaaggcgcca ccgcgtccaa tatccgcttc ctgtcgagca acgaccaggg
     2041 cggccgaccg gatggcgtgc aggttatgct gcacaagggg cacgccttca tcggccacat
     2101 gttcagcgat ggctattcgg tcgtcgacgt gcgcgatcca ctcaatccga agacggtcgc
     2161 cttcgtcggt gcgccgaaga acacccgatc gcaccacctg caaattcacg atgacatcct
     2221 gctcgccgtc aacgggccca atatctgggc catgcagcag tatgcgacgc agcaggacta
     2281 ctacgcgaaa tcgctgatcg actcggtgca gaccgagcag cctttcgccg cgggcttgcg
     2341 ggtgttcgac gtgtcaaagc ccgcctcccc gcgcgaaatc gctttccttc acatccctgg
     2401 cttcggtgcc catcgcatct ggtgggtcgg cggccgccat gcctacgcgt cggtccactt
     2461 cgagggcttc atcgatcatg ccctggccgt gatcgatgtc tcagatcccg cgcggccggc
     2521 gctggtcggg cggtggtggt tgcccggcat gaaccgggct ggcggcgaga cgccgcccgc
     2581 gtcattcggc aagcgcaccg cgctgcatca tctcatcagc gccggaagcc tcggttacgc
     2641 ggcgtggcgc gacggcggtt tcacggtgca cgatctgagc gacccgccaa atccgaagct
     2701 aatcagtcat cgcaactatg ccccgccatt cgccggcggc gcgcacacgc ccctgccgct
     2761 ggcgaaccgc aacctcttgg tgcttgctga cgaggcgaca tccgcgaatt gcgccaacgg
     2821 cctcgcttat acctggctga tcgacgtgag ggagccgtcc aatccggttt cgatcgccac
     2881 cctgcccact cccgccgaag aagacttctg cgccaaaggc gcgaaattcg gaccgcacaa
     2941 tctgcacgag aaccgcccgg gctcgatgca gacggaggac ctgatcttcg cgacctatca
     3001 caatgccggg ctgcgcattt acgacatccg tgacgctttt gcgccgaagc aggtcggcta
     3061 ctacgtgccc ccggcgcctg aaaaaattgt cgaccagcga ccaaacccgg ccagagtcat
     3121 tcagtcgtgt gatgtctttg tcgatccgaa cggcatgatg tatctcaccg acacgaacgc
     3181 cggcctctac atcctgcaat atgaaggaca atgacggagc gctgaggaat gtcgaacagg
     3241 tttggccgcc ttgccctgca tatgtggacg atcgacacga cgcctttgga caccgcgctc
     3301 gatgccgcaa agcaggcggg tttcgacgcg gtcgaactgc gccggatcga tttcaagcga
     3361 tgcttcgagg ctggcatgag caatgcccag gtgctcgacc tcatcaagaa aaacggcatt
//
LOCUS       DATDHO010000359         1939 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_413388, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000359 DATDHO010000000
VERSION     DATDHO010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1939
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413388"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..615)
                     /locus_tag="VIY07_06940"
     CDS             complement(172..615)
                     /locus_tag="VIY07_06940"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY6381526.1"
                     /translation="MKIGEFLKRSRQQLVTCLPDSSLAAIAKLMYAHGIGAMPVCEEG
                     NRMIGIVSERDLVRVFARTDWSELQYLRARDVMTTRVVSCGPEDTMRAAQDLMRTNHF
                     RHLPVVQDGRVQGMLSLRDTLALRLQESEDEMNFLRDAVVAARQH"
     gene            complement(848..1576)
                     /locus_tag="VIY07_06945"
     CDS             complement(848..1576)
                     /locus_tag="VIY07_06945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEY6381527.1"
                     /translation="MITISNVSKWYGKVQVLKNCSTDVAKGEVVVVCGPSGSGKSTLI
                     KCVNALEPFQEGTITVEGISVGDPKTNLPKLRSRIGMVFQHFELFPHLSVRRNLTLSQ
                     IKVLGRDPKIAAEKGMKLLERVGLTAHADKYPGQLSGGQQQRVAIARALAMDPIAMLF
                     DEPTSALDPEMINEVLDVMVNLAKEGMTMIVVTHEMGFARKVANRVVFMDRGEIVEDA
                     PTAEFFGKPRSERAQLFLSKILQH"
     gene            complement(1583..>1939)
                     /locus_tag="VIY07_06950"
     CDS             complement(1583..>1939)
                     /locus_tag="VIY07_06950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6381528.1"
                     /translation="AYFAEIMRAGIQSIPRGQVWSGYALGLNYWQTMGSVVLPQAFRN
                     MLPVLLTQTIILFQDTSLVYVISVTDFLGAASKIAQRDGRLVEMYLFAALVYFVISLA
                     ASYGVRRLQQRIAIIR"
BASE COUNT          384 a          588 c          573 g          394 t
ORIGIN      
        1 gcacgaagac ggtcgccagc caagaaaaca tttgtgtttt tatgcgcggc ctctcgcccg
       61 tcatgcccgc ggtactcgtg ggcatccacg ttttttcttc agcatgtcga caagcaagac
      121 gtggatggcc gggacgagcc cggccatgac gagtcgaaat gtacttgcct ctcaatgttg
      181 acgtgcggcg acgacggcgt cccggaggaa attcatttcg tcctccgact cctggaggcg
      241 caacgccagc gtatcgcgta gcgaaagcat gccttgcacc cgtccatcct ggacaacagg
      301 cagatgccgg aagtgatttg tccgcatcag gtcctgtgcg gcccgcatcg tgtcttcggg
      361 tccgcaactt acaacccggg tcgtcatgac gtcgcgcgcg cgcagatact gcagctcgct
      421 ccagtccgtt ctcgcgaaga cccgcacaag gtcccgttca gagacaatgc cgatcatgcg
      481 gtttccttcc tcgcagaccg gcattgcgcc gataccatgt gcgtacataa gctttgcgat
      541 cgccgccaag ctgctgtcgg gcaggcatgt cacaagctgt tgacgtgagc gcttgagaaa
      601 ctcaccaatc ttcatggggt ccctccggaa ttcacttgtg tgttttctgg tgctgccgat
      661 gccgcgcggg ctacctccgg cctagccaag ggtcaaacaa cgataacgcc gcgaaagccg
      721 ttggggcaaa tcagaattgt tcagcctgtc caccgccgga acgacgaccg acaaggccat
      781 tgcggggcac gcggttaccg tcggcgcgaa cgtctcccga caggttccgc ctcgatgacc
      841 tgcggaatca gtgctgcaga atttttgaca agaacagttg cgcgcgctcg ctgcgcggct
      901 tgccaaagaa ctccgccgtt ggcgcgtcct cgacgatctc gcccctgtcc ataaacacga
      961 cgcgatttgc gaccttgcgc gcaaagccca tttcgtgcgt caccacgatc atggtcatgc
     1021 cttccttggc aagattcacc atgacgtcga gcacttcgtt gatcatttcc ggatcgagcg
     1081 ccgaggtcgg ttcgtcgaac agcatggcga tcgggtccat tgccagcgcc cgtgcgatgg
     1141 cgacgcgctg ctgctgaccg cccgaaagct ggccgggata tttgtcggcg tgcgcggtca
     1201 agccgacgcg ctcgagaagc ttcatgccct tctcggccgc aattttcggg tcgcgtccga
     1261 gcaccttgat ctgtgacagt gtgagattgc gtctgacgga aagatgaggg aacagctcga
     1321 agtgctggaa taccatgccg atgcgggacc gcagctttgg cagattggtc ttcgggtcgc
     1381 cgaccgaaat cccctccacc gtgatggtgc cttcctggaa cggttcgagt gcgttgacgc
     1441 atttgatcaa cgtcgatttg ccggaccccg atgggccgca caccacgacg acctcgcctt
     1501 tggcgacgtc ggtcgaacaa tttttcagca cctgaacctt gccgtaccac ttgctgacgt
     1561 tgctgatcgt aatcatgggc gctcaacgga tgatggcgat gcgttgttgc aggcggcgca
     1621 caccgtagga tgcggcgagc gagatgacga agtagacgag tgcggcgaac agatacatct
     1681 cgaccaggcg tccgtcgcgc tgggcaatct tggatgccgc gccgagaaaa tcggtgaccg
     1741 agatcacgta gaccagcgat gtgtcctgaa acaatatgat ggtctgcgtc agcaagaccg
     1801 gcagcatgtt gcggaaagcc tgcggcagca ccacgctgcc catcgtctgc cagtagttga
     1861 gcccgagggc gtagcccgac cacacctggc cgcgcgggat cgactggatg ccggcgcgca
     1921 tgatctcggc gaaataggc
//
LOCUS       DATDHO010000360         2405 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_265187, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000360 DATDHO010000000
VERSION     DATDHO010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2405)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2405)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2405
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265187"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(35..1090)
                     /gene="hypE"
                     /locus_tag="VIY07_06955"
     CDS             complement(35..1090)
                     /gene="hypE"
                     /locus_tag="VIY07_06955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein HypE"
                     /protein_id="HEY6381529.1"
                     /translation="MSGPKDFNQICPIPLGQYPQVTLAHGGGGKLMHQLIERMFTPAF
                     SNPLLSARHDGATFSVNGARLAFTTDSYVVSPLFFPGGNIGLLAVNGTVNDLAMCGAR
                     PLYLSAGFILEEGLPMETLWSVVQSMRCAADEASVQLVTGDTKVVDKGKGDGIFINTA
                     GIGVVEHDLSISPASVRPGAVVLLNGDLGRHGIAIMAEREGLAFESAIESDCAPLGDL
                     VMRLIDSKIEILCMRDLTRGGLASALVEIAEAAKVQIKIDENSIPVREEVRGACEILG
                     FDPLYLANEGRFVAFIAASDADRALDILRSHPLGDGSCLIGKVTNDSSPAVVMRSRIG
                     ATRMIDMLSGEQLPRIC"
     gene            complement(1094..1438)
                     /locus_tag="VIY07_06960"
     CDS             complement(1094..1438)
                     /locus_tag="VIY07_06960"
                     /inference="COORDINATES: protein motif:HMM:NF014034.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381530.1"
                     /translation="MRSFASCRAKWRGLGAIQRSGLGLSEKFVNYDAEARFGVADYTA
                     EEPAECISGLIMQGVKKPHECSAFGKRCTPEYPLGAPMVSNEGACAAYYRYRKVQIAV
                     NIERNTAPAMEA"
     gene            complement(1344..2228)
                     /gene="hypD"
                     /locus_tag="VIY07_06965"
     CDS             complement(1344..2228)
                     /gene="hypD"
                     /locus_tag="VIY07_06965"
                     /inference="COORDINATES: protein motif:HMM:TIGR00075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HEY6381531.1"
                     /translation="MKYIDEYRDAKMAEECAQAIAAAATKPWTLMEVCGGQTHTIVKF
                     GIDELLPDKITLVHGPGCPVCVTPIELIDKAIEIAARPDVIFCSFGDMLRVPGTQKDL
                     LVVKAGGGDLRVVYSPLDCLKIARENSGKQVVFFAAGFETTAPANAMAVYQAHQHGVT
                     NFSILVSHVLVPPAMEAILSSPSNRVQGFLGAGHVCTVMGYTEYEPIAAKYRVPIVVT
                     GFEPLDILMGVLMCVRQLEEGRAQVENQYARSVRREGNRYAQQIISEVFRIVPRKMAR
                     PRRHSAKRPGLEREVREL"
     gene            complement(2225..>2405)
                     /locus_tag="VIY07_06970"
     CDS             complement(2225..>2405)
                     /locus_tag="VIY07_06970"
                     /inference="COORDINATES: protein motif:HMM:NF013611.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HypC/HybG/HupF family hydrogenase formation
                     chaperone"
                     /protein_id="HEY6381532.1"
                     /translation="VKRVNLSYVPEAKIDDYVVVHVGFALSIVDEEEAEQVFEYLKTI
                     GEVREIECESNSEPG"
BASE COUNT          490 a          763 c          642 g          510 t
ORIGIN      
        1 atgacgctcc ggaatgactg atctgctaac aaattcagca tatgcgtggc agttgctcgc
       61 cgctgagcat atcaatcatg cgcgtggcgc caatcctgct tctcattacc actgccggcg
      121 aagagtcatt cgtaactttc ccgatcaggc aagagccatc gcccaacgga tgtgatctca
      181 aaatgtccag ggcacggtca gcgtctgacg cagcgataaa tgccacgaac cttccttcgt
      241 tcgccaggta gagcgggtcg aagcccagga tctcacacgc gcctcgcact tcttcgcgaa
      301 ccggaatgga gttttcatcg atcttgatct ggaccttcgc cgcttcggca atctccacca
      361 acgcgctcgc caaccctccg cgagtcaggt cgcgcatgca aagtatctca atcttcgagt
      421 caatcagcct catcaccagg tcgccgagcg gcgcgcagtc gctctcaatc gcgctctcaa
      481 acgccagccc ttcgcgctct gccataatcg ctatgccatg acggcccagg tcgccattca
      541 gcagaaccac ggcgccggga cgcacgctcg caggcgaaat cgaaagatcg tgttcgacca
      601 cgccgattcc ggcggtattg atgaagattc cgtcgccttt gcccttgtcc acgaccttag
      661 tatcaccggt gacaagctgg acgcttgcct cgtcggctgc gcaacgcata gactgcacga
      721 cactccagag cgtctccatc ggcaatccct cttcgagtat gaacccggcg ctcaggtaga
      781 gcggccgcgc gccgcacatc gccagatcgt tgaccgtgcc gttgaccgcc aggaggccga
      841 tgttaccgcc aggaaagaag agcgggctga ccacgtaaga atcggtcgtg aaggccagcc
      901 tcgccccatt aacgctgaac gtcgccccgt cgtgccgcgc gctcagcaac gggttcgaaa
      961 acgctggtgt gaacatacgc tcgataagct gatgcatcag cttgccgcct cccccgtggg
     1021 caagcgtcac ctgaggatat tgcccaagcg gaatcgggca gatttggttg aaatcttttg
     1081 ggccgctcat gggtcaagcc tccatcgccg gcgccgtgtt ccgctcaatg ttcacagcga
     1141 tttggacctt gcggtagcgg taataggccg cacatgcgcc ttcgttcgac accatcggcg
     1201 cgcccagcgg atattcgggt gtgcatcgtt tgccaaaggc cgaacattca tgcggtttct
     1261 tcacaccttg cataatcaat ccgctgatgc attccgccgg ctcctcggcg gtgtaatccg
     1321 cgacgccgaa tcgcgcttcg gcgtcatagt tcacgaactt ctcgctcaag cccaggccgc
     1381 ttcgctgaat ggcgccgagg cctcgccatt ttgcgcggca cgatgcgaaa gacctcactg
     1441 attatttgtt gggcgtagcg attgccttcg cgccggactg atcgcgcgta ctggttttcc
     1501 acctgggcgc ggccttcttc gagttgcctc acacacatca atacgcccat caatatgtcc
     1561 agtggctcaa agccggtgac gacaatcggg acacggtact tcgccgctat cggctcgtat
     1621 tcggtgtaac ccatcactgt gcaaacgtgt cccgccccca ggaatccctg cacccggttc
     1681 gacggcgacg aaaggatcgc ctccatcgcc ggaggcacga gcacgtgtga aaccaggatg
     1741 gagaaattcg tgacgccatg ctgatgcgcc tgataaacgg ccatggcgtt ggcgggcgcg
     1801 gtcgtttcaa acccggccgc gaagaagacg acctgtttcc ctgagttttc gcgcgcgatc
     1861 ttcagacaat cgagcggcga ataaacaacg cgcagatctc cgcctccggc cttcacgacc
     1921 aataaatcct tctgcgttcc gggcacgcgg agcatatcgc cgaacgagca gaagatgaca
     1981 tcgggtcgcg ctgcgatctc gatcgccttg tcaatcagct cgatcggcgt gacgcagacc
     2041 gggcagccgg ggccgtgaac caaagtgatc ttgtcgggca gcagctcgtc aatgccgaat
     2101 ttgacaatcg tatgagtctg gccgccacag acttccatca acgtccaggg ctttgtcgcg
     2161 gctgcggcga tggcttgcgc gcactcttcc gccatttttg cgtcgcggta ttcgtcaatg
     2221 tatttcatcc gggctccgaa ttcgattcgc attcgatctc gcgaacctcg ccaatcgttt
     2281 tcaggtattc gaagacctgt tcggcctctt cttcgtcaac tatgctgagc gcgaagccaa
     2341 catgcacgac gacgtaatcg tcaatcttcg cttcgggcac gtagcttaaa ttgacccgct
     2401 tgacg
//
LOCUS       DATDHO010000361        10024 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_314288, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000361 DATDHO010000000
VERSION     DATDHO010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 10024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10024
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_314288"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            417..1241
                     /locus_tag="VIY07_06975"
     CDS             417..1241
                     /locus_tag="VIY07_06975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY6381533.1"
                     /translation="MQMIEAHGARIPQIGLGTMTLKDDVCVQAVQTALQMGYRHLDTA
                     AFYANEKENGEGLRQSGVKREDVFICTKVRQGDLMPDAFAKVLEQSLINLKLPYVELL
                     LIHWNNPDIPLKLSVGALCKAKKEGKTKHIGVANFTTTMLDEAWAVTTEPLVCNQIEM
                     HPFINQDKVLAACKKHGMAVVAYCPIARGKVPGADVLERIGKAHGKTAAQVSLRYLVQ
                     MGVCPIPRTANPEHLKQNADVFDFSLSDAEMAELKKLNAANMRVVNPPHAPKWDAA"
     gene            1282..2097
                     /locus_tag="VIY07_06980"
     CDS             1282..2097
                     /locus_tag="VIY07_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY6381534.1"
                     /translation="MHAVEAKGFKIPTVGLGTWALRGRDCARLTEQAIHIGYRHIDTA
                     QMYDNEREVGEGVRVSGLRADVMVTTKVQPTMLSPHDLERSVKESLARLRLDAIDLLL
                     IHWPNPRVPLAETLGAMAKMKREGYTRQIGVSNFTVALLDEANKISSEPLACDQIECH
                     PFLDQDKVISACRRHGMAVVAYSPIARGGAQGNKVLEKIGRSHGKSAAQVCLRWLIQQ
                     GIVVIPRTSRVERLKENFDIFDFELSDAEMREIRGLAHGSGRIVDWTWSPRWD"
     gene            2114..2824
                     /gene="queC"
                     /locus_tag="VIY07_06985"
     CDS             2114..2824
                     /gene="queC"
                     /locus_tag="VIY07_06985"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012336229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEY6381535.1"
                     /translation="MTISADSALVLFSGGQDSTVCLAWALERFARVETVGFDYSQRHA
                     VELSVRGRLRDKLAGLNPDWTRRLGDDHVIRLGALAAVSETALTRETAIEIADSGLPT
                     TFVPGRNLIFFCFAGALAYRRGARHLVAGMCETDYSGYPDCRDDTVKAIQVALSLGLD
                     KRVTIHTPLMWVDKADTFAMAEQIGGKAFLDLVIEDSHSCYLGDRAQRHDWGYGCGTC
                     PACRLRAEGFAKFIGRKM"
     gene            2824..3387
                     /locus_tag="VIY07_06990"
     CDS             2824..3387
                     /locus_tag="VIY07_06990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014761232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VUT family protein"
                     /protein_id="HEY6381536.1"
                     /translation="MDNEKRRSVEGGIFLVLFCLTIPAANWMIGNVGTVCVSHGPCLV
                     PVAPGIMAPSGVLMVGAALVLRDLVQRRLGVEFGIGAILAGAAISAGLAPPSLVIASA
                     AAFLLSEFADFAVYTPLARRRLVAAVIASSVVGLVVDSIVFLWLAFGSLEFLIGQIIG
                     KLWMVLLAVPFVSYLRRRDERLGLKAA"
     gene            3395..4090
                     /locus_tag="VIY07_06995"
     CDS             3395..4090
                     /locus_tag="VIY07_06995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HEY6381537.1"
                     /translation="MSSPLEILHNVTTGTITTMLLKKGIRRSWMNGAMPFGFSGKRAV
                     GPAFTLRFVPVREDLATPESWSKPISTRGAIEAMPENCVVVADAMGITGAGIFGDILC
                     MRMVKRGVTALITDGVMRDKHGVLATGLPVWCAGVAAPASVNQLTFVGWNEPIGCGGC
                     AIFPDDIIVADDDGAVVIPKELVDFVAHEGAEHELLESWLVQEVQKGEKLPGLYPPNE
                     ENKKRYETWKKTR"
     gene            4090..4881
                     /locus_tag="VIY07_07000"
     CDS             4090..4881
                     /locus_tag="VIY07_07000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEY6381538.1"
                     /translation="MFFLLSKSVAFLLLPSNILIGVAAVGAVLLAAGKKRAGMGLLLA
                     SIILLAIAGWWPTGNLLIHALESRFPQWDTSRGAPDGVVVLGGAIESRLSREFGEPAI
                     GGDGNRIVALGKLARTYPDARIIYSGGDSSLLGNQPPEAEFVYQLLDSLGVPRGRILL
                     EPRSRNTAENAAFTKALANPRGGERWLLVTSAQHMPRAVGSFRRVGFPVEAYPVGWRT
                     GSHADLGVPLAFGDALARFDSGAREWIGLLVYWATGKTSALLPSP"
     gene            complement(4888..5232)
                     /locus_tag="VIY07_07005"
     CDS             complement(4888..5232)
                     /locus_tag="VIY07_07005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEY6381539.1"
                     /translation="MELHRLEGRTQSSELDRMVENAQRASNFLKALAHESRLMILCIL
                     AEGEKSVSELEDLLNLRQPTVSQQLARLRADGLVSTRRDGKTIYYNLASEEARIIIGA
                     IYDVFCRKVRKR"
     gene            complement(5274..5657)
                     /locus_tag="VIY07_07010"
     CDS             complement(5274..5657)
                     /locus_tag="VIY07_07010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEY6381540.1"
                     /translation="MSGAIFIAIAIAKTGAAELVMFEQAGCGWCETFDREIAPVYPKT
                     AEGQRAPLRRVTIDRPVPPDLSFIQVERLAPLFVLVNNGEEIGRIRGYPGEDHFWGLL
                     SVIIKKLDAAAPGDQEQQNSLRPDG"
     gene            complement(5800..6552)
                     /locus_tag="VIY07_07015"
     CDS             complement(5800..6552)
                     /locus_tag="VIY07_07015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381541.1"
                     /translation="MCVKISLMSMTCVARIACLVLTLLGGTLAHGDVLEDFNAAVEAA
                     SAHNRVAIGYLRTGNADLASLEMDRLRDRWLQLTERFSGTRPSAFEGNALYSKLFTAV
                     SARLVGADIMLKTGRLDAARDALDAIRGDLYELRKASGVVVLADCIRDANAMMDALMV
                     YNNRALDWDNSDTRSSLALKAVNYAAGLDRCDGTASEAVRAAPEFRRLIDGAKASLEL
                     IPKAIASRDADLLHRILIELRSFDNLLAFRYG"
     gene            6624..7196
                     /locus_tag="VIY07_07020"
     CDS             6624..7196
                     /locus_tag="VIY07_07020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEY6381542.1"
                     /translation="MIARRNLLAGIAASGALLAFGARAEQPILTDDGLYKQPWFLESF
                     LDLAEDLEGARKDGKRFVIMWELRGCPYCKETHLVNFAQPRISDYVKANFEVLQLNII
                     GSRKVTDFDGTELSEKELAAKYGVRFTPTFQFFAEEAAALKSLPPAKREVARSPGYMR
                     PDDFLAMFRYVREKAYEGKSFRDYLKATPS"
     gene            7307..7762
                     /gene="soxY"
                     /locus_tag="VIY07_07025"
     CDS             7307..7762
                     /gene="soxY"
                     /locus_tag="VIY07_07025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier protein SoxY"
                     /protein_id="HEY6381543.1"
                     /translation="MHQLSRRDALALGASGAALTLIGLEDRASAAAKEAADLINQFTG
                     GKTPANGKVSIELPEIAENGNTVPLSVAVDAPMTADNYVSEIIVVADGNPNPGVATFH
                     FSSLSGKAVASTRIRLAATQNIIAVAKTSKGEFFTNQKLVKVTIGGCGG"
     gene            7788..8111
                     /gene="soxZ"
                     /locus_tag="VIY07_07030"
     CDS             7788..8111
                     /gene="soxZ"
                     /locus_tag="VIY07_07030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003597861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate oxidation carrier complex protein
                     SoxZ"
                     /protein_id="HEY6381544.1"
                     /translation="MAEKPRLKLPSEIKKGEVIEIKTLLPHVMESGQRKDKDGKTIPR
                     KIINKFACEFNGKPVFSANMEPAIAANPYIQFHAKIEESGTFKFTWTDDDGTVTTAEE
                     KVTVS"
     gene            8172..9440
                     /gene="soxA"
                     /locus_tag="VIY07_07035"
     CDS             8172..9440
                     /gene="soxA"
                     /locus_tag="VIY07_07035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016669 - oxidoreductase activity, acting
                     on a sulfur group of donors, cytochrome as acceptor
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0019417 - sulfur oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur oxidation c-type cytochrome SoxA"
                     /protein_id="HEY6381545.1"
                     /translation="MARGGILATSAAIIVALAGGVFVAESGVHAQATKKEAPLELKED
                     ASARPWKRYAGWPTRDYSKYNTIGNLATPPAPKEPRKITGPITGDAKKGAEMVADRNR
                     GGSCLACHVMGPAGGANLPGNVGPDLSEIGNAGREDEWLFNYVYDGRVYNPETVMPPW
                     GSHGFFDDQEINDIVAFLKTLKSPASFKTELDDPTKRPPPVEKRDNLDAIENPGMWAV
                     DKAQELWMQKGSVGFSCNSCHSEPKTAFKTWAASMPKWEPRLNKVLGVEEFVTRHAKT
                     TTGHVWLMETDENRAMSVYLHFLANGTPIKIDTTSAEAKAAIERGKELSARKVGQLNM
                     ACTDCHGKSANHWIRGQWLGEPKGQYDHFPTWRTNLQAIWDIRQRFQWCQVNIRADDL
                     PPDAKEYGDLEFYLATQNEGQKLSVPGIRH"
     gene            9502..>10024
                     /locus_tag="VIY07_07040"
     CDS             9502..>10024
                     /locus_tag="VIY07_07040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfohydrolase SoxB"
                     /protein_id="HEY6381546.1"
                     /translation="MITRRDIVQLGAATAALIAGDGPFSRAMAQQRLTESELLKFDPL
                     GNVTLLHVADIHGQLLPVYFREPAVNLGVGEARGQPPHITGEAFLRRFGIPGKTASAY
                     ALTDQDFEALAKTYGRIGGLDRLATVINRVRAERGNDKVLFLDGGDTWQGSFAANASR
                     GHDMVDCMALLRPD"
BASE COUNT         2099 a         2826 c         3068 g         2031 t
ORIGIN      
        1 aatctgcacc cgcttgttgg ccggcacttt gacctcggca ggcgtgaact gatggttctt
       61 gatcgtgatg gtcaaatcct gggcacgcag gctcgccgaa gcgaggacga tggccgcgac
      121 ggtgctgact agaacaagaa aggtgcgcat acggtttccc caacggtgaa cggccctcac
      181 aaaagcacta aacctcattg atgcaagtcc ttatttttac tcttgaatta ttccaatgta
      241 agaactgagg gcaaaagctt ggaggccaaa gtattgcgaa gccctacagc acagaaacta
      301 ttttcatcgc accagggtcc gcacttctgg aacaagaaac cccggttggc agagccatga
      361 gggcggggca ttctccaccg cccgcccgcg gatccgttct aacaaaggag atttggatgc
      421 aaatgattga agcccatggc gcccgcattc cgcaaatcgg tctgggcacc atgacactga
      481 aagacgatgt ctgcgtgcag gcggtccaaa cagcgctcca gatgggctat cggcatctcg
      541 atacggccgc cttctatgcc aatgaaaagg agaatggaga agggctccgg caatcgggcg
      601 tgaaacggga ggatgtattc atttgtacaa aggtccggca gggcgacctg atgcctgacg
      661 cgttcgccaa agtgctggag caaagcctga tcaatctgaa attaccctac gtggagctcc
      721 tgctgatcca ttggaacaat ccggacattc cattgaagct ttcggtcggc gcactctgca
      781 aagcgaaaaa ggaaggcaag accaagcata ttggcgtcgc caatttcacc acaacgatgc
      841 tcgatgaagc ctgggcggtg acgaccgagc ccctggtctg caaccagatc gagatgcacc
      901 ccttcatcaa ccaggacaag gtgctcgccg catgcaagaa acacggtatg gccgtcgttg
      961 cttattgccc gattgcgcgc ggcaaggttc ctggcgcgga cgtgctggaa cgcatcggaa
     1021 aggcccacgg caaaaccgcc gcgcaggtgt cgcttcgcta tctggtgcag atgggggtct
     1081 gccccattcc gcgcacggca aatcctgaac acctgaaaca gaatgccgac gtattcgact
     1141 ttagcctttc tgacgccgaa atggccgaac tcaagaaact taacgcagcc aacatgcgcg
     1201 tggtgaatcc cccgcacgca ccaaaatggg atgctgcgtg agagcgctct ccacatgatt
     1261 tcaaaagtaa gtcaaagcgt aatgcacgcg gtcgaagcca aaggtttcaa gattccgact
     1321 gttgggcttg gcacgtgggc cttgcgcggc cgtgactgcg cgcgcctgac ggagcaggcg
     1381 attcacatcg gatatcgcca catcgacacc gcgcaaatgt acgacaatga gcgcgaggtc
     1441 ggcgagggcg tgcgcgtgtc tgggctgcgg gcggatgtca tggtgacaac caaggtgcag
     1501 ccgacaatgc tttcaccgca cgatctcgag cgctcggtga aggaaagtct ggcgaggttg
     1561 cgcctcgatg cgatcgacct gctgctgatc cattggccga acccgcgtgt gccgcttgcg
     1621 gaaacgctcg gcgcaatggc aaagatgaaa cgcgagggct atacgcggca aatcggggtt
     1681 tcgaatttca ccgtcgcgct gcttgatgag gccaacaaga tttcaagcga gcctttggcc
     1741 tgcgatcaga tcgaatgtca tcccttcctg gatcaggaca aggtcatcag cgcatgccgc
     1801 aggcacggga tggccgtggt ggcctacagt ccgatcgcgc gcggcggcgc ccaaggcaac
     1861 aaagtattgg aaaagatcgg caggtctcac ggcaagagcg cggcacaggt ttgcctgcgt
     1921 tggctcattc agcagggaat tgttgtcatt ccgcgcacga gcagggtcga gcggctcaag
     1981 gaaaattttg acatattcga ttttgaattg agcgatgccg agatgcgcga gatcaggggt
     2041 ctggcgcatg gcagcgggcg tattgtcgac tggacctggt cgccaaggtg ggactgaagc
     2101 taaggcctcg accgtgacaa tttccgccga ttcagccctg gttctttttt ccggcgggca
     2161 ggactcgacg gtttgccttg cttgggcgct tgagcgcttc gcgcgcgtcg agacggtcgg
     2221 cttcgactac agtcagcggc acgcggtcga gctcagcgtg cgggggcgat tgcgcgacaa
     2281 gttggcaggc ctgaacccgg actggacccg tcgtctgggc gatgatcatg ttatcaggct
     2341 tggcgcgctg gcggccgtct cggaaaccgc tcttacgcgc gagacggcga tcgagattgc
     2401 cgacagcggt cttcccacca ctttcgtgcc gggccgcaac ttgattttct tttgctttgc
     2461 cggggcattg gcgtatcggc gcggggcccg ccacctggtg gccggcatgt gcgagacgga
     2521 ctattccggc tatccagact gccgcgacga caccgtcaaa gccatccagg ttgcgttgtc
     2581 tctcggcctc gacaagcgcg tgactatcca caccccgctg atgtgggtcg acaaggccga
     2641 caccttcgcc atggccgagc agattggggg caaagcattc cttgatctcg tcatcgagga
     2701 cagccatagc tgctaccttg gcgaccgcgc tcaacggcac gattggggct acgggtgcgg
     2761 aacttgcccc gcctgtcggc tccgggcaga aggatttgca aagttcatcg gacggaagat
     2821 gtgatggata acgagaagcg cagaagcgtc gaaggcggca tttttcttgt gctgttttgt
     2881 ctgaccattc ctgccgccaa ctggatgatc gggaatgtcg gcaccgtttg tgtttcccat
     2941 ggcccttgtc tcgtgccggt ggcgcccggc atcatggcac catccggtgt gctcatggtc
     3001 ggcgcggcgc tggtgctgcg cgatctggtg cagcggcggc tgggtgtcga atttggcatt
     3061 ggcgcgatcc tcgccggcgc ggcaatttcg gccggcttgg cgccgccatc cctggtgatt
     3121 gcctcggcag ccgcgttctt gctgtcggaa ttcgccgact tcgccgtcta cacgccgctc
     3181 gcccgccgcc ggctggtcgc agcggtgatt gcctcgagcg tggtcggact ggttgtcgac
     3241 tccattgtgt ttctttggct cgcgttcggg tcgctggagt tcttgatcgg ccagattatc
     3301 ggcaagctct ggatggttct gctcgccgtg ccgttcgttt cgtatctgcg ccgccgcgac
     3361 gagcggctcg ggttgaaagc tgcgtgaggc caacatgagt tcgccgctcg agatcctgca
     3421 caatgtgacc accggtacta ttacaacaat gctgctgaag aagggcattc gccgttcctg
     3481 gatgaatggt gcgatgccgt ttggcttttc cgggaagcgc gcggtggggc cagcttttac
     3541 cctgcgcttt gttcctgtac gcgaagatct tgcgacgccc gagagctggt cgaagccgat
     3601 ttcgacccgt ggggcgatcg aggccatgcc cgagaattgc gtggtggtgg cggatgcgat
     3661 gggcatcacc ggcgcgggaa ttttcggcga catcttgtgc atgcgcatgg tcaagcgcgg
     3721 ggtgaccgcg ctcattaccg atggcgtcat gcgagacaag cacggcgtgc tggcgacggg
     3781 cttacctgtg tggtgtgcgg gcgttgcagc gccggcttcc gtcaaccagc tgacgttcgt
     3841 gggctggaac gaaccaatcg gttgtggcgg ctgcgcgatt tttccggacg acattatcgt
     3901 tgcggacgac gacggcgcgg tggtcatccc aaaggagctc gtggatttcg tcgctcatga
     3961 aggagccgag cacgaactac tcgagagctg gctggttcag gaggtgcaaa aaggggagaa
     4021 gcttcccggc ctttatccgc ccaacgaaga aaataaaaag cgatacgaga cctggaagaa
     4081 gacgcgctga tgttctttct gctctccaag agcgttgcgt ttctgttgtt gccttccaat
     4141 atcctgatcg gagtcgctgc tgtaggtgcc gtgctgctgg cagccggcaa aaagcgagcc
     4201 ggcatgggtc tattactggc aagcattatc ctgcttgcga ttgcgggctg gtggccgacc
     4261 ggaaatctgc tgattcacgc cctcgaaagc cgctttccac agtgggatac aagtcgcggc
     4321 gcgccggacg gcgttgtcgt attgggcggt gcgatcgagt cccggttgtc gcgtgagttt
     4381 ggggaacctg cgatcggggg cgacggaaac cgcatcgttg ccttggggaa gcttgcgcgc
     4441 acctatccgg atgcgcggat catatattcc ggaggcgatt cgagcctcct cggtaatcag
     4501 ccaccggaag cggagttcgt ctatcagctg cttgatagtc tcggcgtccc gcgcggtcgc
     4561 atcctgttgg agccgcgctc ccgcaacacc gctgaaaatg ctgcttttac aaaagcgctt
     4621 gcgaacccga gagggggcga gcgctggctc ctcgtaacct cggcacagca catgccgcgc
     4681 gcggtcggct ctttccggcg agtcgggttt ccggttgagg cttatcctgt gggctggcgc
     4741 acgggctcgc atgcggacct cggggtgccc ctggcgtttg gtgacgcgct ggcgcgattt
     4801 gattctggcg ctcgcgagtg gatcggcttg cttgtctatt gggcaacagg caagacaagc
     4861 gcgctccttc catcgccata ggcccggcta gcgtttgcgc acctttcggc agaacacgtc
     4921 gtagattgca ccgatgatga tgcgtgcctc ttcgctggcc agattgtaat agattgtctt
     4981 gccgtcacgc cgcgtcgaca ccaggccatc cgctcggaga cgggccagtt gttgagacac
     5041 ggtgggctgc cgcaggttca atagatcttc cagctcgctt actgatttct caccctcggc
     5101 aaggatgcag aggatcatca gccggctttc gtgcgcgagc gccttgagaa aattgctggc
     5161 gcgctgggcg ttttcgacca tgcggtcgag ttcgctcgac tgtgttcggc cttcaaggcg
     5221 atgcaattcc atagacacac cacaatattc acgcgttctc cggatatcga tgatcaacca
     5281 tccgggcgca aggagttttg ctgttcttga tcgcccggtg cggcggcatc aagtttcttg
     5341 attattaccg agagcaatcc ccagaagtga tcctctcccg gatagccgcg gatgcggcca
     5401 atttcctcgc cattgttgac caagacgaat agcggcgcga gccgttcaac ctggatgaag
     5461 gaaagatccg gaggcactgg gcggtcgata gtgacgcggc gcaggggcgc gcgctggccc
     5521 tccgctgttt tggggtagac gggtgcgatt tcacggtcaa aggtctcgca ccatccgcag
     5581 cccgcctgtt cgaacatcac aagttcggcc gcgccagttt ttgcaatcgc aatggcgatg
     5641 aatattgcgc cggacacaac gcatcgagaa aaaaatttcc agatttgccg agcgcagacc
     5701 aacttcttct ctcgctcaaa cagaggacac ttcgccaacg cgaaggtggg cgatttatat
     5761 cacagaagcg agccatgtcg acgcaacagc atggaggcgt caaccgtagc ggaacgccaa
     5821 aagattatcg aatgacctga gttcgatgag aatacgatgc aacagatcgg catcgcggct
     5881 ggcaatcgct ttcgggataa gctccagact tgccttggcg ccatcgatca gccgacgaaa
     5941 ctcgggcgca gcgcggacgg cctcgctcgc tgttccgtcg caccggtcaa gtccggcggc
     6001 gtagtttacg gctttcaggg cgagggagga gcgtgtatcc gaattgtccc agtcgagcgc
     6061 gcggttattg tagaccatga gcgcgtccat catcgcgttg gcatcgcgga tgcaatcggc
     6121 caacacgacg acgccgctcg ccttgcgcag ctcatagagg tcgccccgga tggcatcgag
     6181 cgcgtcgcgg gcagcgtcga gtcgtcctgt cttgagcatg atgtcggcgc cgacaagccg
     6241 tgcgctcacc gcagtgaaca gcttgctgta aagcgcattg ccttcaaacg cgcttggtcg
     6301 cgtgccggaa aaccgctcgg tgagctggag ccacctgtcg cgcagccgat ccatttcaag
     6361 ggaggcgagg tcggcattgc cggtgcgcaa atagccgatg gcgacccggt tgtgggcgct
     6421 cgccgcttct actgcagcat taaagtcctc gagaacatcg ccatgggcca atgtgccacc
     6481 cagcagggtc agcacgaggc atgcgatacg ggcaacgcag gtcatcgaca tcaacgatat
     6541 tttgacgcac atatgttcct agatataccc acgtcctgca gtaaacggga tcaagttgcc
     6601 tgcgtggttt atgagaattg tccatgattg ccaggcgtaa cctgctggcc ggaattgcag
     6661 catccggtgc gctgctggcc tttggcgcgc gcgcggagca accgattctg accgacgatg
     6721 ggctctacaa gcagccatgg tttctggaaa gctttcttga ccttgccgag gatcttgagg
     6781 gagcccgcaa ggacggtaag cgctttgtga ttatgtggga gctgagaggt tgtccgtatt
     6841 gcaaggaaac ccacctggtc aatttcgcac aaccgcgaat atcggactat gtaaaggcca
     6901 attttgaagt gctgcagctc aacatcattg gatcgcgaaa ggtcaccgat tttgacggga
     6961 ccgagttgtc ggaaaaggaa ttggccgcga aatacggtgt gcgatttacg cccacgtttc
     7021 agttcttcgc ggaagaggcc gcggcgctga aaagcctgcc gccggccaaa cgcgaagtgg
     7081 cccgttcccc cggctatatg cgtccggatg atttcctcgc gatgtttcgc tacgtgcgcg
     7141 agaaagccta tgagggcaaa agctttcgcg actacctgaa ggcaacccca agctgaggaa
     7201 agccgcgacg gaatattctt ttttacgaat atgatttgat cggccagcgt agcaaagcta
     7261 tcttcaactc gaaggaccat gtacgaacgt cctggaggaa gagttcatgc accaattgtc
     7321 ccgtcgcgat gccttggcgc ttggcgcttc gggggcggcg ctcacgttga ttggcttgga
     7381 agaccgtgct tcggctgcag ccaaggaggc ggctgacttg atcaaccaat ttaccggcgg
     7441 caagacgccg gcaaatggca aggtttcaat tgagttgccc gagattgccg agaacggcaa
     7501 caccgttcca ctctctgtcg cggtcgatgc tccgatgaca gccgacaatt acgtgagcga
     7561 gatcatcgtc gtcgctgacg gaaatcccaa cccgggcgtt gccacgtttc acttttcttc
     7621 gctatcgggc aaggcagtgg cctcaacccg aatccggctc gccgccacgc agaacatcat
     7681 tgcagtggca aaaaccagca agggtgagtt cttcacaaat cagaagctgg tgaaggtcac
     7741 catcggcggc tgcggcggtt gatcgaaaaa ggaatcggga gacaatcatg gcggaaaagc
     7801 cgaggctcaa gcttccctcc gaaatcaaga agggcgaggt cattgaaatc aagacgctgc
     7861 tgccgcacgt gatggagtcg ggccagcgca aggacaagga tggcaaaacc atcccgcgca
     7921 agatcatcaa caagtttgct tgcgagttca atggcaagcc tgtgttctcg gccaatatgg
     7981 aaccggcgat tgccgcaaat ccttacatcc aattccacgc caagattgaa gagagcggaa
     8041 cgttcaagtt cacctggacc gatgacgacg ggacagtgac cacggcggaa gaaaaggtaa
     8101 ccgtgagctg agcttgattc cgcccgggca gaagcgccgg gcggcaaata ataattgggc
     8161 gggagggtcg aatggcgcgc ggaggaattc tggcaacgag cgcggcaatc atcgttgctt
     8221 tggctggtgg cgttttcgtt gcggaatccg gtgtccatgc acaggcaaca aaaaaagagg
     8281 cgccgcttga gctgaaggag gatgcgtcgg caagaccgtg gaagcgttat gccggatggc
     8341 cgacgcgtga ctattcgaaa tacaacacga tcggcaatct ggcgacgcct cccgctccga
     8401 aggagccacg caagatcacc ggtccaatca ccggcgatgc aaagaaaggg gccgagatgg
     8461 tcgccgatcg caatcgcggc ggctcgtgcc ttgcctgcca cgtcatgggc ccagccggcg
     8521 gcgccaacct gcccggcaat gtcggtcccg acctttccga aatcggaaat gccggccggg
     8581 aagacgagtg gctgttcaat tacgtctacg atgggcgggt ctacaatcct gagaccgtga
     8641 tgcccccctg gggcagtcat ggcttctttg acgatcagga gatcaacgac atcgtggctt
     8701 tcctgaaaac tttgaagtcg cccgccagct tcaagaccga gctcgacgac cccaccaagc
     8761 ggccgcctcc ggttgagaag cgcgacaatc tcgatgcgat tgaaaaccct ggcatgtggg
     8821 cagtggacaa ggcgcaggaa ctctggatgc aaaaaggctc ggtcggcttt tcgtgcaaca
     8881 gctgccatag cgagccgaaa actgctttca agacctgggc cgcttcgatg ccgaaatggg
     8941 aaccgcggct caacaaggta ctgggcgtcg aggaatttgt gacgcggcat gccaagacca
     9001 cgacgggcca cgtctggctg atggaaaccg atgaaaaccg cgctatgtcg gtttatctgc
     9061 attttctcgc caatggaacg ccgatcaaga tcgatacgac aagcgccgaa gccaaggccg
     9121 cgatcgagcg cggcaaggag ttgagcgcgc gcaaagtcgg ccagctcaac atggcctgca
     9181 ccgactgcca tgggaaatct gccaaccatt ggatccgggg acagtggctg ggtgagccga
     9241 aaggacagta cgatcatttc ccgacctggc gcacgaatct tcaggcaatt tgggacattc
     9301 gacagcgttt ccagtggtgc caggtcaaca ttcgcgccga tgatctgccg cccgacgcca
     9361 aggaatacgg tgatctcgag ttctatctcg ccacgcagaa cgagggtcag aagctcagcg
     9421 tacccggcat caggcattag aatcgtcatc gcgggctacc gggagcaatc ggcttgtgaa
     9481 ggctgataac gtggacgcgt catgatcacc cgccgggaca ttgttcagct cggcgccgca
     9541 accgccgcac tgattgctgg tgatggcccg ttctcgcgcg cgatggcgca acagcgcctc
     9601 accgaatcgg agctgctcaa gttcgacccg ctcggcaacg tgacgctgct tcacgtggcc
     9661 gacattcacg ggcagctcct gcccgtctat ttccgcgagc cggcagtcaa tctcggcgtc
     9721 ggcgaggcga ggggacagcc gccccacatt accggcgagg cattcctcag gcgtttcgga
     9781 attcccggaa aaacggcctc agcctatgcg ctgaccgatc aggatttcga agcgcttgcc
     9841 aaaacctacg gccgcatcgg aggactcgac cggcttgcca cggtgatcaa tcgcgttcgc
     9901 gccgaacgtg gcaacgacaa ggttctgttt ctcgatggcg gcgacacctg gcagggctcg
     9961 ttcgcagcca atgcaagtcg gggccacgac atggtcgact gcatggcctt gctaagaccg
    10021 gatg
//
LOCUS       DATDHO010000362         1911 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_64214, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000362 DATDHO010000000
VERSION     DATDHO010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1911
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64214"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..778)
                     /locus_tag="VIY07_07045"
     CDS             complement(2..778)
                     /locus_tag="VIY07_07045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEY6381547.1"
                     /translation="MNRTGLICVLAIAVAAGLLFGLYPELDLQVARHFHAVETPDQDG
                     FALRYYPSLVRARNFCLWIPALLVAPAAGALLIKLILPWRKLLMPGRAVVFLIATMIL
                     APGIMANVILKEHWGRSRPVNVTQFGGNGHFVPWWDRRGDCPENCSFVSGDVAGAFWT
                     LAPAALAPLQWRALAYVAAFALGTGMAALRMMIGAHFPTDVIFAGVFTYLIVWIAYAF
                     IYRWPRTRLSDDDVDWSLSRLTLPAYNFVAGLFGRKPKLY"
     gene            850..1449
                     /locus_tag="VIY07_07050"
     CDS             850..1449
                     /locus_tag="VIY07_07050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HEY6381548.1"
                     /translation="MTTRTVDFWFEFGSTYSYPAAMRLAPLAKAAGIAVRWRPFMLGP
                     IFRDQGWDTSPFNLYPAKGRNMWRDLERICLALNLQFIRPNPFPQNTLQAARIALIGL
                     AESWGENYCRAIYRAEFGEGRNVENEETIADVLQNLGQDARAVLQRARSDEIKTQLRA
                     QTEEARQLDIFGSPSFVTADGELFWGNDRLEAALNWATR"
     gene            complement(1446..1895)
                     /locus_tag="VIY07_07055"
     CDS             complement(1446..1895)
                     /locus_tag="VIY07_07055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381549.1"
                     /translation="MSLFGRIIVILVALILAIMAAGITLAIGIIAPDWAGIDSDPVER
                     LSFFIVSFFATSFVGAVAILPAALLIVISEAARLRSFLFYGVGGALVGLASYYGSDIS
                     VRLENTTDVPPVANALQLAAAAGIIGGLVYWLIAGRNAGRWHEPKSA"
BASE COUNT          476 a          570 c          547 g          318 t
ORIGIN      
        1 cttaatacaa tttcggcttt cgaccgaata atcccgcaac aaaattatac gccggcaagg
       61 tcaggcgact aagcgaccaa tcgacatcat catccgacag gcgcgtgcgc ggccagcgat
      121 agatgaaggc gtatgcaatc caaacgatga gataggtgaa gacgccggcg aagatcacat
      181 cggtaggaaa atgcgcgccg atcatcatgc ggagcgctgc catgcccgtg ccgagggcaa
      241 aggcggcaac ataggccaga gcacgccatt gcagaggagc caatgcagcc ggcgcaagag
      301 tccagaaagc ccctgcgacg tcgcccgaca caaacgagca gttttctggg caatcgccgc
      361 ggcggtccca ccacggcacg aaatgtccgt tgcctccgaa ttgagtgacg ttgaccggcc
      421 gcgagcgacc ccaatgctcc ttgagaatca cattggccat aatgcctggt gccaaaatca
      481 tcgtcgcaat gagaaaaacg accgctcggc ccggcatcaa caatttgcgc cacggcaaga
      541 tgagcttgat caaaagggca ccggccgcag gggccaccag cagtgccgga atccacaggc
      601 agaaattgcg tgcccgtacc aacgacggat aataacgcag cgcaaatcca tcttggtccg
      661 gcgtctcgac tgcatgaaaa tgccgggcga cttgcaaatc gagttcggga taaagaccaa
      721 agagcaaacc agccgctacg gctatcgcca gcacacaaat gagccccgtc cgattcatgc
      781 gcgtctcgtc tagccgagga actcaaaaat agaaaggcga catactgcgc gagtgactat
      841 attgcgccca tgacgacgcg aaccgtcgac ttctggtttg aattcggatc gacttattcc
      901 tatccggcag caatgcgtct ggcgccattg gcgaaagcgg caggcatcgc cgtgcgctgg
      961 cgtcccttca tgctggggcc gatattcagg gaccagggct gggacacatc tccgttcaac
     1021 ttatacccgg ccaagggccg caatatgtgg cgggacctgg agcgtatttg tcttgcgctg
     1081 aatttgcagt tcatacggcc caatcctttt ccgcaaaaca cgctccaggc cgcgcggatc
     1141 gcgctgattg ggcttgccga aagttgggga gagaactatt gccgcgccat ttatcgcgcc
     1201 gaattcggcg aaggccgcaa tgtcgagaac gaggagacga ttgcagacgt tctgcaaaat
     1261 ctcggacagg acgcgcgcgc cgtgctgcaa cgagctcgat cggacgaaat aaagacgcaa
     1321 cttcgcgcgc aaaccgagga agcgcggcag ctcgacatat ttggctcacc gagcttcgtc
     1381 actgccgacg gtgagctctt ttggggcaac gaccggctgg aagccgcgct gaattgggct
     1441 acccgctagg cgctctttgg ctcgtgccag cggcccgcgt tgcggccggc aatcaaccag
     1501 tagacaagcc cgccgatgat cccggctgcc gccgccagct gcagcgcatt cgcgacaggc
     1561 ggcacatcgg tcgtgttctc gagccgcacg gagatatccg agccgtaata cgacgccaga
     1621 ccgaccaggg cgcctcccac gccatagaaa agaaaactgc gcaagcgtgc cgcttccgag
     1681 ataacgatga gcagcgccgc cggcagtatt gccaccgctc caacgaagct ggtagcgaag
     1741 aacgaaacga tgaagaaact cagccgctcg accggatcgg agtcgatccc tgcccagtcc
     1801 ggcgcaatga tcccgatcgc aagcgtaatg cctgcggcca tgatagccag gataagcgcc
     1861 acgaggatca cgatgatgcg gccgaagagg gacatgattt aatcctgaaa a
//
LOCUS       DATDHO010000363         9845 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_413654, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000363 DATDHO010000000
VERSION     DATDHO010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 9845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9845
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413654"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..990
                     /locus_tag="VIY07_07060"
     CDS             <1..990
                     /locus_tag="VIY07_07060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEY6381550.1"
                     /translation="LTTAPDGGEFCLRPDLTIPVSRDYLASSSAGNAAGYCYLGPVFR
                     YRADAPPEFLQAGIESFGRSDKAAADAEMLSLGLEATAHYGVASPDIQIGDVALFASL
                     IAGLDLPPAWKRRLVKDFNRKSNLVQDLDRLVLGGNNARPEYQGVLAALAGSDPKGAH
                     ALITDLLSIAGINAVGGRSVGEIAGRFLEQSALGASARLPQEVRGLIERFLTIQGNPD
                     EAAADLRALAHDSKMTPALAPALDHFESRTGFLEARGVDVKRVRFSTAFGRGFDYYTG
                     MVFELTDPDRTGDPLVAGGRYDDLLTRLGAPDPIAAVGFAVWIERLAIYGGGS"
     gene            987..1961
                     /gene="hisG"
                     /locus_tag="VIY07_07065"
     CDS             987..1961
                     /gene="hisG"
                     /locus_tag="VIY07_07065"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEY6381551.1"
                     /translation="MNAPLIVAVPAKGRLQENAEAFFGRAGLTLMKPRGARDYRGAIA
                     GLDGVEVAYLSAAEITSQLAAGGVHLGVTGEDLVREMIPDADKRVVLIEGLGFGFANV
                     VVAVPQAWIDVRTMADIDDVATAFRHHHERKMRVATKYINLTRDFFSSHGVIDYRIVE
                     SSGATEGAPAAGTAEMIVDITTSGATLAANGLKVVEDGTILRSQANLIAARKAPWGET
                     ERNLARVILDRVAAQARARAFREVRARFAAGTDMLVENAKQKFSIETPFGGPTSSGML
                     ILHCPPDQVYALTSFLRESGAEAVAVADLDYVFSRDNPLYARLEAGLA"
     gene            complement(1972..2940)
                     /locus_tag="VIY07_07070"
     CDS             complement(1972..2940)
                     /locus_tag="VIY07_07070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein BugD"
                     /protein_id="HEY6381552.1"
                     /translation="MKKLIAALVTALASIGIAGADTFPSRSITIIVPFSAGGPTDALA
                     RTLGDRMRQTLGQPIVIENVTGAGGTIGVARAVQAAPDGYTLSIGHLGTHVVNGAIYP
                     LTFDLVKGFEPVAMIASNPMMIVTKNDVPAKNLKELIAWLKTNDGKATAGTAGVGSGS
                     HFSGVYFSQLIGAKFQFVPYRGTGPALLDLVSGQIDFIVDQASNSMAQVKAGKIRPYA
                     ITSDKRLAAAPEIPTVDEAGLPGFHVELWSGVWVPKGTPKSIIGKLNAAIRDALADPT
                     VRKRLEETGLDIPAREKQTPEALGAHQQAEVKKWWPMIKAAQVKAE"
     gene            complement(2993..4234)
                     /locus_tag="VIY07_07075"
     CDS             complement(2993..4234)
                     /locus_tag="VIY07_07075"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEY6381553.1"
                     /translation="MQHDENLKVDRPSFVTHLECAMTGERHEADQVHNLSRAGKPLLV
                     RYDLAGIRNALKKEMLAERPADLWRYREMLPVRHADDIVSLGEMMTPIVRMPRLSAKL
                     GGGEILVKDEGRLPTGSFKARGLVMAVSMAKALGIKHMAMPTNGNAGAALAAYASRAG
                     IKTTIFCPEDTPEVNVSEIALQGATVYRVNGLIDDCGEIVAEGKAKVGWFDTSTLKEP
                     YRIEGKKTMGLELAEQFGWQLPDAIFYPTGGGTGLIGMWKAFAELEAIGFIGKKRPRM
                     IAVQAAGCAPMVKAFEAGEEHAPRWENAHTIAAGIRVPQAIGDFLILRAVRESGGFAI
                     AVSDETISAALDEMAREEGFLLCPEGAATYAAYKQSLADGRVKRTDQVVLFNCASGLK
                     HPLPPVRRTLDRHKPIDFASL"
     gene            complement(4260..4721)
                     /locus_tag="VIY07_07080"
     CDS             complement(4260..4721)
                     /locus_tag="VIY07_07080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HEY6381554.1"
                     /translation="MIPAPLQNVLDRLTLAWHERAIALKAVSFAFVGVLNTAIDFCVF
                     WTTVTYLHWPLVPANVLAWIVAVTFSYTMNSFITFGPESGRVLRWRDYASFAASGIAG
                     MMSSTATLFALSYFVPVLLAKLVSILVSFAVNFSLSHFVVFRPRRPRGDAR"
     gene            4829..5872
                     /locus_tag="VIY07_07085"
     CDS             4829..5872
                     /locus_tag="VIY07_07085"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY6381555.1"
                     /translation="MAVKATKGTSRTRASPSEPTLSVVVPLFNEAKSLPGLHERVAEV
                     ARYLQTRRGLSVEVVYVDDGSSDDTADIAKSLPAIPLDIQVIILSRNFGKEAALLAGL
                     DHARPGAVLFMDGDGQHPADLIDTLVARWLDDGYDVVYTAKANRENESWLRRMGVRSF
                     YALLNWGARHKIPEDAGDFRLLSARAAAALRQMPERNRFFKGLSSWIGFRQVRVDYEP
                     AVREHGRSSWNLWTLIGLSIEGLTSFSVAPLRVASLLGVLLALTALFFGSWIVLETLL
                     YGKDVPGYPSLVVSVMVIGGVQLILIGVLGEYIGKLLSEIKGRPVYFVAEHSVKRASE
                     SAKPRQMTSRAAE"
     gene            5881..6723
                     /locus_tag="VIY07_07090"
     CDS             5881..6723
                     /locus_tag="VIY07_07090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChbG/HpnK family deacetylase"
                     /protein_id="HEY6381556.1"
                     /translation="MRTRHIWLCADDYGISPGVNAAIRELITGGRINATSVMVTAPHF
                     NSGEAAALDGLNAREKRAAIGLHVTLTSPFQPLSAGFSPLRNGRFLPVNDLLRGATAR
                     RLRSEFLIAEIASQLRAFADIFGRPPDFLDGHQHVHLFPQIRDAFLRVVAQQAPNVWV
                     RQCGRAKSGRRLHDHKGLTLDILSIGFRRKAKRLGIATNPAFAGTYSFSSRANFAKIF
                     PRFLSGLPDRGLIMCHPGFVDAELIGLDSLTALREQEFAYFSSDAFMKVLADHGAALA
                     RPHW"
     gene            6774..7469
                     /locus_tag="VIY07_07095"
     CDS             6774..7469
                     /locus_tag="VIY07_07095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2076 domain-containing protein"
                     /protein_id="HEY6381557.1"
                     /translation="MTPQERQLVDDLFDRLAGLENAPRDPEAERTISEGLARAPHAIY
                     PLVQTVLVQDEALKRADARIRELTGEDTPGASGGFLDSMRQAMTGRATSVPSVRQGAP
                     DPRWNTGGTFTAAGPSPGGSFLGTAAASAAGVIGGALLLNSISSMFGRHGASAFAGVP
                     PEGSPWDNKAAGSDLAREAGLNDIGTGGRGSSERASLFGNDDDTDSSDLEDDFSDDSG
                     GDSGGDFGGGDSA"
     gene            complement(7476..8207)
                     /locus_tag="VIY07_07100"
     CDS             complement(7476..8207)
                     /locus_tag="VIY07_07100"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6381558.1"
                     /translation="MSNIASAQSLFSAVDPAPETGSVVVVAAAAEVPPNPIAGFIEFL
                     FGDAGRQSQRGSQQWFGAPPRQDSRDEQDGRLAYANASSDDPLPDQRSDDRIDPRLLR
                     QEVVYSGTEAPGTVVIDTPNHHLYLVQAEGRAIRYGIGVGRPGFTWSGKHSISAKKEW
                     PDWVPPDQMIKRQPYLPHFVAGGPNNPLGARALYLGSTLYRIHGSNEPWTIGRNVSSG
                     CIRMRNADIIDLYERVKVGTKVVVL"
     gene            8426..9040
                     /locus_tag="VIY07_07105"
     CDS             8426..9040
                     /locus_tag="VIY07_07105"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF016247.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009288 - bacterial-type flagellum
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0050920 - regulation of chemotaxis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HEY6381559.1"
                     /translation="MQRKVFRIEQMVEAGRASGLGSQHDDASDSHRRPEIRPVITREF
                     AAIKSALESNARELAVLINDGKDRRMTRAAGDLGAAIEGMETATQKILASAEAIDDCA
                     RALASALSNDYHHGLAQDVQDHVVRIYEACNFQDLAGQRIGKVIAILMMIEDRLMAMI
                     ARHNGSEEQPVRHGETSRERLVNGPRLDGETGYASQGDIDVMFA"
     gene            complement(9037..>9845)
                     /locus_tag="VIY07_07110"
     CDS             complement(9037..>9845)
                     /locus_tag="VIY07_07110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381560.1"
                     /translation="GRIFGIGARRPITALTLAGGFASTVSWPATHVLIERVGWSDTYL
                     VYAALLAVIAAPLHALALPRGRFETEVEVLGGQKEPAKLLPSRGWPFVLVASAFACYA
                     FVPSGLSAHLLAIFARAGIDAGTVVWIGALFGPAQVGARLLEFTFGRNLHPLWVVRFA
                     LSTLLCAFVMLALAGVSAPTAAAFALMFGGANGLVTITRGAVPLALFGASGYGRLIGR
                     FAGPFLLMQSAAPLVMAFVVQYTSDAAALTLAASFALVALICFVAIRRPN"
BASE COUNT         1943 a         3048 c         3009 g         1845 t
ORIGIN      
        1 ctcactaccg ccccggatgg cggcgagttc tgcctccgcc ccgatctcac gattccggtg
       61 tcgcgcgatt acctcgcttc cagctcagca ggaaacgcgg ccggctattg ttatctcggt
      121 ccggttttcc gctaccgcgc cgacgcgccg ccggaatttt tgcaagccgg catagagtcc
      181 ttcgggcgct ccgacaaagc agcagccgac gcagaaatgc tttcgcttgg cctggaagca
      241 actgcgcatt atggcgttgc ttcacccgat atccagattg gcgatgttgc tttgtttgcg
      301 agtctcatcg ccgggctcga tttgccgcct gcatggaagc ggaggctggt caaggatttc
      361 aaccgcaaga gcaatctggt gcaggatctc gatcgcctcg tgctcggcgg caacaacgcc
      421 cgccccgaat atcagggtgt gctcgcggcg cttgccggtt ccgatccaaa gggtgcgcat
      481 gcgctgatca ccgacctgtt gtcgattgcc ggcatcaatg cagtcggcgg gcgttcggtc
      541 ggcgaaattg cagggcgttt cctcgaacaa tcggcgctcg gggccagcgc caggttgccg
      601 caggaagtaa ggggcctgat cgagcgcttt ctgaccattc agggcaatcc ggacgaggcc
      661 gccgccgatc tgcgcgcgct cgcgcacgat tccaaaatga cgccggcgct cgcgcccgcg
      721 ctcgaccact tcgaaagccg caccggattt ctggaagcgc gcggcgtcga tgtaaagcgc
      781 gtgcgcttct ccaccgcgtt tggccgtggc ttcgactact acacgggcat ggtctttgaa
      841 ttgaccgatc ccgatcgtac cggcgatccg ctggtcgcgg gcggccggta cgatgacttg
      901 ctgacgcggc ttggcgcgcc cgaccccatt gcggcggtcg ggttcgccgt ctggatcgaa
      961 aggctggcga tttatggagg cgggtcatga acgcgcccct gatcgtcgcc gttcccgcca
     1021 aaggccgcct gcaggagaac gccgaggcgt tctttgggcg cgccgggctg acgctcatga
     1081 agcctcgggg cgcgcgtgac tatcgcgggg caatcgcggg cctcgatggg gtcgaagtgg
     1141 catatttgtc ggcggctgaa atcaccagcc aacttgctgc gggaggtgtc catcttggcg
     1201 tcacgggcga agatctcgtt cgcgagatga tccccgacgc ggacaagcgc gtggtgctga
     1261 tcgaaggact tggctttggt ttcgccaacg tcgttgtggc ggtgccgcag gcctggatcg
     1321 acgtgcgcac gatggccgat atcgatgacg tcgccaccgc tttccgccac caccatgaac
     1381 gcaagatgcg ggtggcgacc aaatacatca acctgacgcg cgactttttc tcctcgcacg
     1441 gagtcattga ctatcgcatc gtcgaaagct caggcgcgac tgaaggtgcg cccgctgccg
     1501 gtacggcaga aatgattgtc gacatcacca cgagcggcgc aacgcttgcc gccaacgggc
     1561 tgaaagtcgt tgaggacggc accatcctgc gatcgcaggc aaacctgatc gcagcgcgaa
     1621 aggccccctg gggcgaaacc gagcgcaatc tcgcccgcgt tattctcgac agggtcgcgg
     1681 cgcaggcacg cgcgcgggca tttcgggagg tgcgcgcgcg ctttgcggca ggcaccgaca
     1741 tgctggtcga gaatgccaaa caaaaatttt caatcgagac gccgttcggc ggccctacgt
     1801 cttccggcat gctcatcctg cattgcccgc cggatcaggt ttacgcgctg acgagttttc
     1861 tgcgcgagag cggcgcagaa gctgtcgcgg tggctgatct cgattacgtc ttctcccgcg
     1921 acaatccgct ctatgccagg ctcgaagcag gtcttgcctg atagctcgct gctattcggc
     1981 cttgacctgc gccgccttga tcatgggcca ccattttttc acttcggctt gctgatgcgc
     2041 gccgagcgct tccggggtct gcttctcgcg cgccggaatg tccagaccgg tttcttccag
     2101 ccgcttgcgc actgtcggat cggccaaggc atctctgatc gcggcgttaa gcttgccgat
     2161 gatgcttttg ggcgttcctt tcggcaccca aactcctgac cacagttcga catgaaatcc
     2221 gggaagaccg gcttcgtcga cggtcggaat ttccggcgcg gcggcgagcc gcttgtcgga
     2281 cgtaatagca tagggacgga tcttgccggc cttgacctgc gccatggagt tcgaggcctg
     2341 atccacgatg aaatcgatct ggccggatac gagatcgagc agcgccgggc cggtgcctct
     2401 atacggaacg aactggaatt tggccccgat cagctggcta aaataaaccc ccgaaaaatg
     2461 cgagcccgaa ccgacacccg ccgtgccggc cgtcgccttg ccatcattcg ttttaagcca
     2521 ggcaatcagt tccttcagat tttttgccgg cacatcgttc ttggtcacga tcatcatcgg
     2581 attgctggcg atcatcgcaa ccggctcgaa acccttcacc aaatcgaaag tcagagggta
     2641 aatcgcgccg ttgacgacgt gtgttccgag gtgcccgatg ctcagcgtgt acccgtccgg
     2701 tgccgcctgc accgcgcggg cgacgccgat tgtgccgcct gcaccggtga cgttctcgat
     2761 cacgatcggc tggccgagcg tctgccgcat gcgatcgccg agagtacgcg cgagcgcatc
     2821 ggtcgggcct ccggcggaga acggcacgat gatggtgatg gatcgcgacg gaaaggtatc
     2881 cgcgccggct atcccaatac tcgcaagtgc cgtgacaagg gcggcaatca gttttttcat
     2941 tgcttcctcc caggacggcg ttttctgcgc acgcttggca ggaagcatcc gattataagg
     3001 acgcaaaatc aatcggcttg tgccgatcca gcgtgcggcg cacgggcgga agcggatgtt
     3061 tcaagccgct ggcgcaattg aacaggacga cctgatcggt gcgcttcaca cgcccatcgg
     3121 ccaggctctg cttgtaggcc gcatacgttg cagcgccctc cggacatagg aggaagccct
     3181 cctcgcgcgc catttcgtcg agcgctgcgc tgatcgtttc gtccgacact gcaatagcga
     3241 agcctccgct ttcccgcacg gcgcgcaaaa tgagaaagtc gccgatggcc tgcggcacgc
     3301 ggatgcctgc ggcaatggtg tgcgcattct cccagcgtgg cgcgtgttcc tcgccggcct
     3361 cgaaagcctt caccattggc gcacagccgg cggcctgcac ggcgatcatg cgcggacgtt
     3421 tcttgccgat aaagccgatg gcctccagtt ctgcgaacgc cttccacatg ccgatcagcc
     3481 cggtgccccc gcccgttgga tagaaaatcg cgtcaggcag ctgccagccg aattgttcgg
     3541 ccagttcaag tcccatggtt ttcttgccct cgatccggta gggctctttc aaggtcgatg
     3601 tgtcgaacca gccgactttc gcctttccct cggcgacgat ctcgccgcaa tcatcgatca
     3661 gcccattcac gcgatagaca gtggcgccct gcagcgcgat ctcgctcaca ttcacttccg
     3721 gggtgtcttc cgggcagaaa atcgtggtct tgatgccggc acgcgacgca taggctgcaa
     3781 gcgcggcgcc cgcgttgccg ttggtcggca tggccatatg cttgatgccg agcgctttcg
     3841 ccatcgagac ggccatgaca aggccgcgcg ccttgaatga gccggtcggc agccgacctt
     3901 cgtcctttac aaggatttcg ccgccgccaa gctttgcgga aaggcgaggc atccgcacga
     3961 tgggcgtcat catctcaccc aggctgacaa tgtcgtcagc gtggcgcaca ggcagcattt
     4021 cgcgatagcg ccagagatcg gccggacgct cagccagcat ttcttttttc agcgcgttgc
     4081 gaatccccgc gagatcgtat cgcaccagca gcggtttgcc cgcccgcgac aaattatgga
     4141 cctgatcggc ctcatgacgc tcgccggtca tcgcgcattc gaggtgcgtg acaaaactgg
     4201 gacgatcgac cttcagattc tcgtcgtgct gcatggtccg gatccggctt gcgcgtgcct
     4261 tatcgggcat ctccccgcgg ccgccgcggg cggaacacca cgaagtgcga cagggagaag
     4321 ttgaccgcga agctgaccag aatcgacacc agcttcgcga gcagaacggg aacgaaatag
     4381 gacagcgcga acaatgtcgc ggtgctcgac atcatcccgg caatgcccga ggcggcgaaa
     4441 ctcgcatagt cgcgccagcg cagcacgcgg ccggattcgg ggccgaacgt gatgaacgaa
     4501 ttcatcgtgt aggaaaacgt cacggccacg atccacgcca acacgttcgc cggcacgagg
     4561 ggccagtgca ggtaggtaac cgtcgtccag aaaacgcaga aatcgatagc cgtattcagg
     4621 acgccgacga aggcaaaact gaccgccttg agcgcaatgg cgcgctcatg ccaggccagc
     4681 gtgagacggt ctaggacatt ttggagaggg gccgggatca tcgtcggcct tcgcttagca
     4741 cggcaaatca tatcccggta ggccgggcgc gacagtgccg ctcgggtgcg gtatagatcg
     4801 cggaaacggc gcgacaggct ggacagagat ggcagtaaaa gcgacgaaag gaacctcacg
     4861 cacgcgagcg tcgccgtccg aaccgacgtt gtcggtggtg gtgcctttgt tcaatgaggc
     4921 gaaaagtctg cccggcctgc acgagcgggt tgccgaggtc gcgcgctatt tgcagaccag
     4981 gcgtggcctg agtgttgaag tcgtgtacgt cgatgacggc agcagcgatg acacggccga
     5041 catcgcaaaa tcactgcccg caatcccgct cgacatccag gtcatcatct tgtcgcgaaa
     5101 tttcggcaag gaagccgcgc tgctcgctgg ccttgatcac gcgcggcctg gcgccgtgtt
     5161 gttcatggac ggcgatggac agcatccggc tgacttgatc gatacgctcg tcgcccgctg
     5221 gctcgatgac ggttatgacg tcgtctacac cgccaaagct aatcgcgaga atgaatcctg
     5281 gctcaggcga atgggcgtgc gctcgttcta cgcgctcctg aactgggggg cacgtcacaa
     5341 aattccggaa gacgccggcg attttcgctt gctgtcggcg cgcgccgctg ctgcgctgcg
     5401 ccagatgccg gagcgcaacc gcttcttcaa gggcctttcg agctggatcg gtttccgcca
     5461 ggttcgcgtc gactacgaac ctgccgtccg cgagcacggc cgcagtagct ggaacctatg
     5521 gacgctgatc gggctgtcca ttgaaggact cacgtcattt tcagtggcgc ccctgcgcgt
     5581 cgccagcctc cttggcgtcc ttctggcgct gacagcgctg tttttcggca gctggatcgt
     5641 gctggaaacg ctcttgtacg gtaaggatgt ccccggctac ccgtcgctcg tggtcagcgt
     5701 gatggttatt ggcggcgttc agctcattct gattggggtg ttgggcgaat acatcggcaa
     5761 gctgttgtcg gaaatcaaag gccggccggt ctatttcgtc gccgaacaca gcgtgaagcg
     5821 cgcgagtgaa tccgccaagc cccggcagat gacatctcgc gcggccgaat aagacagact
     5881 atgcgcacgc gccacatctg gctgtgcgcc gatgactacg gaatttctcc gggggtcaac
     5941 gccgccatcc gcgaactcat cactggcgga cgcatcaacg ctacatcggt catggtcacc
     6001 gcgcctcatt tcaacagcgg cgaagcagcg gcactcgatg ggctcaacgc aagggaaaaa
     6061 cgcgccgcta tcggattgca cgtgaccctt acgtcgccgt ttcagccgct gagcgcgggt
     6121 ttttcgcctc tgcgcaacgg gcggtttttg ccggtcaacg accttctgag gggcgcaacc
     6181 gcgcgccgct tgcggtcgga attcctgatt gcagagatcg ccagccagct gcgcgcgttt
     6241 gccgacatct tcgggcgacc gcctgatttc cttgatgggc accagcacgt tcatttgttt
     6301 ccccagatac gcgacgcatt tttgcgggtt gtggcgcagc aagcgccaaa cgtctgggtg
     6361 agacaatgcg ggcgcgcaaa atcgggccga cgccttcacg atcacaaagg ccttaccctt
     6421 gacatcctga gcatcggctt tcgtcgaaag gcaaaaaggc tgggaatcgc aaccaatccg
     6481 gctttcgcag gaacttatag tttcagttca agagcgaatt tcgccaaaat cttcccgcgc
     6541 tttctctccg ggctaccgga caggggcctc atcatgtgtc atccgggctt cgtcgatgcc
     6601 gagctaatag ggctcgattc gctcaccgca ctgcgggagc aggaattcgc ctacttcagt
     6661 tccgatgctt tcatgaaagt gttggcggac cacggcgcgg ctcttgcgcg cccccactgg
     6721 taaagcccgc cgcgtcacct aaataacttc gccgacggtc atgggaggat gatatgaccc
     6781 cgcaagaacg ccagttggtt gacgacttgt ttgatcggct cgccgggctg gagaacgcgc
     6841 ctcgcgaccc agaagccgag cgtacgattt cagaggggct ggcgcgcgcg ccgcacgcga
     6901 tctatccgct tgttcagacg gtacttgtcc aggacgaagc gctcaagcgc gccgatgcgc
     6961 gcatccggga gcttacagga gaggacacgc ccggggcttc tggcggattt ctcgacagca
     7021 tgcggcaggc gatgactggc cgcgcaacgt ctgtgcccag cgtgcgccaa ggcgcgcccg
     7081 atccgcgctg gaacaccggc ggtactttta cagccgcggg tccatcgccg ggcggctcat
     7141 tcctgggcac cgccgcagcc tctgccgctg gagtgattgg cggcgcgctg cttctgaatt
     7201 cgatcagttc gatgttcggc cgccatggtg caagcgcgtt tgccggggtg ccccccgaag
     7261 gctcgccatg ggacaacaag gccgctggca gcgacctcgc tcgcgaggcg ggactcaacg
     7321 acatagggac gggcgggcgc gggagctccg agcgtgcctc cctgttcggg aacgatgacg
     7381 atacagattc gtccgatctc gaggacgatt tcagcgacga ttcgggcgga gattccggcg
     7441 gcgattttgg cggcggcgac agcgcctgag caaggctaga gcaccacgac tttggtgccg
     7501 accttcacgc gctcgtaaag atcgatgatg tccgcattgc gcatccggat gcaacccgag
     7561 gacacgtttc taccgattgt ccacggctca ttcgagccgt ggatacggta aagcgtcgaa
     7621 ccaaggtaaa gcgcgcgcgc acccagcgga ttattcgggc cgccggcaac aaaatgcgga
     7681 agataaggct ggcgcttgat catttgatcg ggcggcaccc aatccggcca ttcctttttt
     7741 gccgaaatcg aatgctttcc cgaccacgtg aaaccggggc ggcccacgcc tatgccatat
     7801 cggattgcgc gaccctcggc ttggaccaga tagagatgat ggttcggcgt gtcgatgacg
     7861 acagtgccgg gcgcttctgt cccgctatag acgacctcct ggcgcaaaag acgcggatca
     7921 atccgatcgt cggatcgctg gtctggcagc ggatcgtccg acgacgcgtt cgcataggcc
     7981 agccgcccgt cctgttcgtc gcgtgagtcc tgccgcggtg gggccccaaa ccactgctgc
     8041 gatccgcgct gtgactgtcg cccggcgtcg ccgaacagaa attctatgaa accggcaatc
     8101 gggttgggtg gcacttccgc cgccgccgcg acgacgacaa cggacccggt ttccggtgcg
     8161 ggatcgaccg cagaaaacag cgactgcgcg gacgcaatgt tcgacacgga cagcaccaaa
     8221 ctaccaaaga cgaccgaacg ccacatagac tcaccattgc cgtttcactc gacgcctcga
     8281 gtaaaaagcc aaagacgcaa ccgattggta aattgccgta aaccacgatc cttcatggta
     8341 aacgatcggt ttttaaggcg ggcgcgcaac gcggcgttaa tgccggttcc ggtaataaca
     8401 gacgccgaaa tgcagggcac agggcgtgca acgcaaagta tttcgtatcg agcagatggt
     8461 cgaagccggt cgcgcctccg gtctgggcag ccagcacgac gatgccagcg actctcatcg
     8521 gcggccggag atcagaccgg tcattacgcg cgagttcgct gcgatcaaat ctgcgcttga
     8581 aagcaacgct cgcgaacttg cagtgctcat caacgacggc aaggaccggc gcatgacccg
     8641 cgcggccggt gatctcggcg ccgctatcga aggcatggaa acggctaccc aaaaaattct
     8701 ggcatcggct gaggcgatcg atgactgcgc gcgagctctc gcctctgcct tgagcaatga
     8761 ctaccaccat ggcctggcgc aggatgtgca ggaccacgtg gtccgcattt acgaagcttg
     8821 caatttccag gacctcgcag ggcaacgtat cggcaaagtg atcgccattt tgatgatgat
     8881 cgaggaccgc cttatggcaa tgatcgcccg ccacaacggc agcgaagagc agcctgtgag
     8941 gcacggcgag acgtcacgcg aaaggcttgt caacgggccc cggctcgacg gcgaaacggg
     9001 ctacgccagc cagggcgaca tcgacgtgat gtttgcctag tttggcctgc ggatcgcgac
     9061 gaagcagatc agcgcaacca atgcgaagct ggccgcaagc gtcaaagctg ccgcatcgga
     9121 cgtatactga accacaaagg ccatgaccaa aggcgccgcg gattgcatca gcaagaacgg
     9181 cccggcgaac cggcctatta ggcgcccgta tccggatgcg ccaaacaatg ccagcggcac
     9241 tgcgccacgt gtgatggtga caaggccgtt agcgcctccg aacatcagcg cgaacgcagc
     9301 tgccgttggc gctgacacgc ccgcgagcgc cagcattacg aaggcacata aaagcgtgct
     9361 gagcgcgaaa cgtacgaccc agagaggatg cagattgcgc ccgaaggtaa actccaaaag
     9421 ccgggcgccg acctgcgctg gaccgaacaa ggcgccaatc cagacaaccg ttccggcgtc
     9481 gataccggca cgcgcaaata ttgcgagcag atgagccgag agtcccgaag gaacgaatgc
     9541 atagcaagca aatgctgacg caacgaggac aaacggccag ccgcgagacg gcagcaattt
     9601 tgctggctct ttctggccac ccagaacctc gacttcagtt tcgaagcgtc cgcgcggcag
     9661 agccaatgca tgcagcggag ccgctataac ggcaagcagc gcggcgtaca caagataggt
     9721 gtctgaccaa ccgacacgct cgatgagaac atgcgtggca ggccagctca ccgtagaggc
     9781 aaagccgccg gcgagcgtga gcgccgtaat cggccgtcgc gcgccgatgc cgaagatacg
     9841 gccca
//
LOCUS       DATDHO010000364         1952 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_64364, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000364 DATDHO010000000
VERSION     DATDHO010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1952
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64364"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1715
                     /locus_tag="VIY07_07115"
     CDS             <1..1715
                     /locus_tag="VIY07_07115"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEY6381561.1"
                     /translation="HREALAQILRAAALANDSTLAQRDGRWAVQGDPTEGALVVAARK
                     FGIGTSDLERFPRLAEIPFTSERKRHTTVHVDRDNPAELHVFVKGAPEILLAKCRYVM
                     GSGKAEPLTDARRTEFLQRNEGLARQALRTLAIAMRTVSPASLGIDPKTAAASAVEPP
                     ESVEQELILLGVAGMIDPPRTEARDAVITAKRAHIRSVMITGDHPATAEAIARELTIF
                     EPGSRLVTGSDLRAMDDAALDAIVEDVRVFARVDPEHKLRIVGALQRKGHIVAMTGDG
                     INDAPALKAANIGVAMGITGTDVSKEAADMVLTDDNFASIVKAIEEGRGIYDNIRKYL
                     IYLLSSNAGELLTMFAGVMLAGMLGLTSVDAGLFLPLLAAQLLWINLVTDGPPALALG
                     VDPRDPDVMQREPRQRGKGVLTTEDWFRLGAIGAVMMVGTLAVLDAYYPGGLFTLFAK
                     GSAPNAADETYARTMAFTTLMMFQLFNVYNCRSSWRSAFSGFFDNKWLLVAVLLSLGT
                     HILVIYVPFLQVAFHTVALTLTDWMVTTLVAAVLLVGMEIVKLSMRAKPQHARRIGRA
                     APAE"
BASE COUNT          364 a          634 c          601 g          353 t
ORIGIN      
        1 cgcaccgaga ggctttggcg cagatcctga gagccgcggc gcttgccaac gattcgacgc
       61 tggcgcagcg cgacggccgc tgggcagtgc agggcgaccc gactgaaggc gcgctggttg
      121 tcgccgcgcg taagttcggg atcggcacat ccgatctcga acggtttccg cgcctcgccg
      181 aaattccgtt cacgtcggag cgcaagcgcc acaccactgt ccatgttgat cgcgacaacc
      241 cggccgagtt gcacgtcttc gtcaagggcg cgccggaaat cctgctcgcc aaatgccgct
      301 atgtcatggg atccggcaag gctgaaccgc tcaccgacgc ccgccgcacc gaatttctac
      361 agcgcaacga agggcttgcc cggcaagctt tgcggacgct tgccatcgcc atgcggactg
      421 tgtcgccggc aagcctcggc atcgatccga agacagccgc tgcaagcgct gtcgagccgc
      481 ccgagagcgt cgagcaagag ctaatcctgc tcggagttgc cggcatgatc gatccgccgc
      541 gcaccgaagc gcgggatgcg gtgatcactg ccaagcgcgc gcatattcgc tcggtgatga
      601 tcaccgggga tcatccggcg accgctgaag ccatcgcccg tgagctcact atcttcgagc
      661 cgggttcgcg gctcgtcacc ggcagcgatc tccgcgccat ggacgacgcg gcgctcgacg
      721 ccatcgtcga ggacgtgcgc gtattcgccc gcgttgaccc cgagcacaag ctccgcatcg
      781 tcggcgcgct ccagcgcaag gggcacatcg tcgccatgac tggagacggc atcaacgatg
      841 cgcccgcact caaagccgcc aacatcggcg ttgccatggg catcaccggc accgatgtct
      901 ccaaggaggc agccgacatg gtgctgactg acgacaactt cgccagcatc gtgaaggcta
      961 tcgaggaagg ccgggggatc tacgacaaca ttcgcaagta cctgatctac ctcctctctt
     1021 cgaatgccgg agagctgctg actatgttcg cgggcgtgat gctcgcaggt atgcttgggc
     1081 ttacctcggt cgatgcgggc ctgttcctgc cgctgctcgc ggcgcagctg ctctggatta
     1141 acctcgtcac cgacgggccg cccgcgctgg cgctgggcgt cgatccgcgc gaccccgacg
     1201 tcatgcagcg cgagccgcga cagcgcggca aaggggtgct cacgaccgag gactggtttc
     1261 ggcttggcgc gatcggcgca gtgatgatgg tcggcacgct cgccgtgctc gatgcctatt
     1321 atccgggcgg gctgttcact ctgttcgcca agggctcagc gccaaatgcg gcggacgaga
     1381 cctacgcccg caccatggcg ttcaccacgc tgatgatgtt ccagctgttc aacgtctaca
     1441 actgccgctc gagctggcgc agcgcgttta gcggcttctt cgacaacaaa tggttgcttg
     1501 tggcggtgct gttgtcgctc ggcactcaca tactggtgat ctacgtgccg tttctgcagg
     1561 tggctttcca caccgttgca ttgacgctga cggattggat ggtcacgacc ttggtcgcag
     1621 cggtgctgtt ggtcgggatg gaaatagtga agctgtcgat gcgggcgaag ccgcagcacg
     1681 cccgtcggat aggccgagcc gctcccgcgg agtaaccacc gcaaacgcgc cggcaacgat
     1741 gcttgggccc gaataaaacg gcagcccaag cacgtgcaaa tctactgttg cagcctgtcg
     1801 ccaggccaaa agcgcgccaa tccgccgttc ctatcaatgg cgcgctttga aaatcctact
     1861 ggacaaccct ttcacagcga gcgaccattc ttgcccgcaa aacgcagcga gcacgtggcg
     1921 aagactctgt aatttgagtc catcaaagcg ga
//
LOCUS       DATDHO010000365         4351 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_265550, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000365 DATDHO010000000
VERSION     DATDHO010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4351
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_265550"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..610)
                     /locus_tag="VIY07_07120"
     CDS             complement(<1..610)
                     /locus_tag="VIY07_07120"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6381562.1"
                     /translation="MRIGVAGLGVMGAAVAARLMEVGHEVTVWNRTPAKTKPLADAGA
                     KVAATPAELASAVDATITMLTDAAAIDAVYNGPNGLLSGDVKGKLLIEMSTVSPNVPK
                     ELAPKIRAKGAAMVECPVGGSTAPARQGKLLGLMGAEPADAERAKPILNQLCRRLEHC
                     GPIGTGASMKLAINLPLMVAWQAYGEAFAIAGAAGWEPKRLLD"
     gene            762..1664
                     /locus_tag="VIY07_07125"
     CDS             762..1664
                     /locus_tag="VIY07_07125"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6381563.1"
                     /translation="MATRKTKGAVGVIGLGIMGGAFARNLAAADWHVVGYDTSPARQR
                     EARRTGVEVMRNAAEVAAAVPIILTSLPKPQALMETVQKIVAAKLSKKVLVEMSTFTI
                     SDKEKAARMAEKTGHVMIDCPVSGTGSQAKNRDLVFYASGDAPTIAKLRPVLMAFGRQ
                     VFDVGAFGNGSRMKYVANLLVAINNVAAAEAMVLGMKAGLDPRMIVDLVTAGAGNSRV
                     FELRAPMMAKGRYDDVTMKISVWDKDMQVIGDYACKIRVPTPIFNATKGIYLKAMKNG
                     LGGQDTAAVCAVLEKMAKVKRRRP"
     gene            1840..3606
                     /locus_tag="VIY07_07130"
     CDS             1840..3606
                     /locus_tag="VIY07_07130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEY6381564.1"
                     /translation="MASLQQRTEVRGGMRIDWNVPITMDDGLVLRADIFRPVKDGKFP
                     VILSYGPYAKNLAFQDGYPSAWQRMAEKHPDVTAGSSNLYQNWEVVDPEKWVPHDYAC
                     VRVDSRGTGCSPGFIDHFSPRETKDFYNCIEWAGVQPWSNGKVGLNGISYYGINQWHV
                     ASLQPPHLTAMCIWEGAADWYRDMTHHGGILSTFWENWYDMQVKTVQYGAGERGKRSR
                     VHGELVCGPETLSDEELAKNRAEFGAEIVSHPLDDEYHKARSPRWDKIVTPLFTAANW
                     GGQGLHPRGNFEGYVRAASRQKWLEAHGIEHWTHFYTDYGREQQLRFFDHFLHGKKDV
                     WAKQPKVQLQVRHIDKFEPRAEAEWPLKRTRWTKFYLDPASMTLTTKKPPGVAQLKFA
                     AMGDGLTFLTPPLAKETEITGPSALKLYASSSTSDADFFIVLRVFTGDLKEIVFQGAI
                     DPHTPVAQGWLRASHRKLDRKLSKPYRPYHTHDEKQPLKKGEPVELDIELWPTSIVVP
                     AGYRIGLSIRGKDYEYGGASGGRLSNFKNELKGCGPFLHDDPRDRPPAIFNGTTSLHF
                     GRGKTPHLLLPIIPPKKQAGRK"
     gene            3728..>4351
                     /locus_tag="VIY07_07135"
     CDS             3728..>4351
                     /locus_tag="VIY07_07135"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381565.1"
                     /translation="MNTQFWLVQAFNGISYGALLFLVGAGLSLIFGVMRIVNLSHGSY
                     FLLGGYVALSVIGTTGSWLLSIPIAALTIAVVGLIMERLFLRPEGHAKLVRDAVIALG
                     IALVIRLLIGPILPRLLPGQIGAIIQLTLVVIALSIPIFLLLQRISAVAIEADVLRQV
                     LMTVGFAFLFQQAALDIWGGNNFDIQPPSALTQSLVIGGIYLPLYRLF"
BASE COUNT          867 a         1323 c         1294 g          867 t
ORIGIN      
        1 ggtcaagcag ccgcttcggc tcccagccag cggcgcccgc gatggcgaag gcctcgccgt
       61 aagcctgcca ggccaccatc agaggcaggt tgattgcgag cttcatggaa gcgccggttc
      121 cgatcggacc gcaatgttcg agccgtctgc acagctggtt aagaatgggc tttgcccgtt
      181 cggcatccgc cggctcagcg cccatcaggc cgagcagttt tccctggcgc gcgggagcgg
      241 tcgagccccc gacaggacac tcgaccatcg ccgcgccttt cgcgcgtatc ttcggagcga
      301 gctccttcgg cacgttgggc gacactgtgc tcatttcaat gagcagcttg cctttcacgt
      361 ctcccgaaag aagtccgttc ggcccgttgt acacggcatc gatcgcagct gcgtcggtca
      421 gcatggtgat ggtcgcatca accgcgctcg ccagttccgc cggcgttgcc gccaccttgg
      481 cgccggcatc agccaaaggc ttggtcttcg caggtgtgcg attccacact gtcacctcgt
      541 gcccgacctc catgagccgt gccgcaacgg cagcgcccat gactccaaga cctgcaacgc
      601 caattcgcat acatcctcct tagatgctcc ggtcgccgac gataggcgat cacggatgcg
      661 ctttaaagcg ccttgcatgc ctcgcgactc gacagtcttc cggtcagcgc ataagacggg
      721 acggacaaat ttgatgcgct tccgtttcgg ggagatggtg aatggcgaca agaaagacca
      781 aaggcgcggt cggcgtgatc gggctcggca tcatgggcgg tgcgtttgcg agaaatctgg
      841 cggctgccga ctggcacgtg gtcggttacg acaccagtcc tgcgcgacag cgggaagcac
      901 gccgcaccgg tgtcgaggtc atgcgcaatg ctgctgaagt ggctgccgcg gtgccgatca
      961 ttctcaccag cctccccaag ccacaggcgc tgatggaaac cgtccagaaa attgtcgccg
     1021 ccaagctcag caagaaggtg ctggttgaaa tgagcacctt cacgatttca gataaggaaa
     1081 aagctgcgcg catggcggag aagactggcc acgtcatgat cgattgtccg gtcagcggca
     1141 cagggtcgca agcgaagaac cgcgaccttg ttttctatgc cagtggcgat gccccaacca
     1201 tcgcgaagct gcgtccggtg ctgatggctt tcggccgtca ggtcttcgat gtcggcgcct
     1261 tcggcaatgg cagccgcatg aaatacgtcg ccaacctgct ggttgccatc aacaatgtcg
     1321 ccgccgcgga ggcaatggtt ctcgggatga aagccggtct cgatccgcga atgattgtcg
     1381 atctcgtgac cgccggcgca ggcaattcgc gggtcttcga gctgcgcgcg ccgatgatgg
     1441 ccaaaggccg ctacgacgac gtcaccatga agatttccgt gtgggacaag gacatgcagg
     1501 ttatcggcga ttatgcatgc aagatccgcg tgccaacgcc gatattcaac gcaaccaaag
     1561 gcatctatct caaggcgatg aaaaacggcc tcggtggtca ggacaccgcc gccgtctgcg
     1621 ccgtgcttga gaagatggca aaggtgaagc gacgcaggcc ttagtcgtca cgagccacct
     1681 accgttcatt cccgcgcacg cgggaatcca ggagacaatg ctactgctgg gtccccgctt
     1741 tcgcggggac gagcggaaat gctcgcgtct tcttcacgct tgcgtcctgc gtccccttcg
     1801 atagcctgcg cgcccgtgaa tttcgttcga gaggatgtaa tggcgtcgtt gcaacagcga
     1861 accgaagtcc gcggcggcat gcggattgac tggaacgtgc cgatcacgat ggacgatggg
     1921 ctggtgctcc gcgccgatat ctttcgcccg gtgaaagacg gaaagtttcc ggtcattctt
     1981 tcctacggtc cctacgcgaa gaatcttgcg tttcaggacg gctacccaag cgcgtggcag
     2041 cgcatggcgg agaagcaccc cgacgtgacc gccggatcaa gcaatctcta ccagaactgg
     2101 gaagtagtcg atccggagaa atgggtgccg cacgattacg cctgcgtgcg cgtcgactcg
     2161 cgcgggacag ggtgctcgcc gggcttcatc gatcatttct cgccacgcga gacaaaggat
     2221 ttttacaact gcatcgaatg ggccggcgtg cagccctggt ccaacggcaa ggtcggtctc
     2281 aacgggatct cttattacgg gatcaatcag tggcacgtgg cttcgttgca gccgccccac
     2341 ctcaccgcga tgtgcatctg ggaaggcgct gccgactggt atcgcgacat gacgcatcac
     2401 ggcggcattc tctcgacgtt ttgggagaac tggtacgaca tgcaggtcaa gaccgtgcag
     2461 tacggagccg gcgagcgtgg caagcgcagc cgtgttcacg gcgagctggt atgcgggccc
     2521 gagaccttgt ccgatgaaga gctcgccaag aaccgtgccg aattcggcgc cgaaatcgta
     2581 tcccatccgc tggacgacga gtaccacaag gcacgctcgc ccaggtggga caagatcgtc
     2641 acgccgctgt tcaccgcagc caattggggt ggccagggtc tgcatccacg cggcaatttc
     2701 gagggctacg tgcgggctgc ctccaggcag aaatggctgg aagcgcacgg catcgagcac
     2761 tggactcact tttacacgga ttacgggcgc gagcagcagt tgcgcttctt cgaccatttc
     2821 ctgcacggca agaaggatgt ctgggcaaag cagcccaagg tgcagttgca agtgcgtcac
     2881 atcgacaagt ttgagccgcg cgccgaggct gaatggccgc tcaagcgcac gcgctggacc
     2941 aagttctatc ttgatccggc gtcgatgacg ctcacgacca agaagccgcc aggagtggcg
     3001 caactgaagt ttgcagcgat gggcgacggt cttacgttcc tgaccccacc cctcgccaag
     3061 gaaacagaaa tcaccgggcc gtcggcgctg aagctgtacg cctcgtcttc gacgtccgac
     3121 gcggattttt tcatcgtgct gcgcgtgttc accggcgacc tcaaggagat cgtgtttcag
     3181 ggcgcaatcg acccgcacac ccccgtcgcg cagggatggc tacgtgcgtc gcaccgcaag
     3241 ctcgacagga aattgtcgaa gccataccgc ccctatcaca ctcacgacga gaagcagcct
     3301 ctgaagaaag gagagccggt ggagctggac atcgaactct ggccgacttc gatcgttgtt
     3361 ccggccggtt atcgcatcgg gttgtcgatc cggggaaaag attacgaata cggcggggcg
     3421 agcggcggca ggctgtcgaa cttcaaaaat gagctaaaag ggtgcggtcc ctttctgcat
     3481 gacgatcctc gcgatcgccc gcccgctatt tttaatggca ccacgagcct gcatttcggc
     3541 cgcggcaaga cgcctcattt gctattgccg atcattccgc cgaaaaaaca agcaggtcga
     3601 aagtgaaaac tttggcttgc cgcggcacga aaccacaatt ccggctgcgg ccaattaggg
     3661 tattaattct cctcgaacct aaggtaagct tcgtgcaacc ttcgagtaac agaaggaaca
     3721 ggggggaatg aatacgcaat tctggttggt gcaggccttc aatggcattt cctacggcgc
     3781 actgcttttt ctcgtcgggg ccggcctgtc gctgatcttt ggcgtgatgc gcatcgtcaa
     3841 tctgtcgcac ggctcctact ttttgctcgg tggctacgtc gccctctccg tcatcggaac
     3901 caccggctcc tggctgctgt ccataccgat tgccgcgctc accatcgctg tcgtcggctt
     3961 gatcatggaa cgcctgttcc tgcggccgga aggccacgcc aagctcgtgc gcgacgcggt
     4021 tatcgcgctt gggatcgcgc tcgtgatccg gctactgatc ggaccaatcc tgccacgact
     4081 gctgcccggc cagatcggcg ccattattca gctcacgctg gtcgtgatcg ccttatccat
     4141 tccgattttc ctgcttttac aacgtatatc cgccgtcgca atcgaagccg acgtattgcg
     4201 acaggtgttg atgactgtcg gcttcgcgtt cctgtttcag caggccgcgc tcgacatctg
     4261 gggcggcaac aatttcgaca tccagccgcc gagcgcgctg acgcaaagtc tggtgatcgg
     4321 aggcatttac ctgccgctct accggctgtt c
//
LOCUS       DATDHO010000366         1737 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_363779, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000366 DATDHO010000000
VERSION     DATDHO010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363779"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1111
                     /locus_tag="VIY07_07140"
     CDS             <1..1111
                     /locus_tag="VIY07_07140"
                     /inference="COORDINATES: protein motif:HMM:NF020119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HEY6381566.1"
                     /translation="RGPRSRITGELVCGPETLSEDELARNREEMWAELLAHPLDGPYY
                     RERSADWSKVTVPLLSAANWGGQGLHTRGNFEGFMRAASKHKWLEVHGGSHWAPFYTD
                     YGIKLQKRFFDYHLKGINNDWESQPRIQLQVRHIDRFVERHENEWPLARTRWTCFHLD
                     PHDMRLSPKPVSSDKSLEYSALGDGVTFSTPPLEAETEITGPSALKLFVSSSTADTDI
                     FAILRVFAPEGHEVVFQGALDPHTPIGQGWLRASHRRLERALSTPYCPYHTHDEIQPL
                     TPGEIAELDIEIWPTCIVVPRGYRVALTIRGKDYEYDGPGATLSNMKNVMRGCGPFVH
                     DDPVDRPPAVFGGKVTLHFGPNRSAHIVLPVIPPK"
     gene            1132..>1737
                     /locus_tag="VIY07_07145"
     CDS             1132..>1737
                     /locus_tag="VIY07_07145"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6381567.1"
                     /translation="MKQRRKTNARKRAAVLARRSRHIIPAIDIHAHFVPEEYLRLIEA
                     EGEPYGVRLRPGANGPMIVVGQAVIGPITAHYHNLDVRLKAMDAQRVTVHALSLNPPM
                     VYWADNALGLRLARLVNDALAEANRAHPDRFVALATLPLQDPEAAVTEAERAVTELGC
                     RGIYLGTNVRGKELSDSSFLPVFERIHALGAPIFLHPFNVIG"
BASE COUNT          359 a          556 c          492 g          330 t
ORIGIN      
        1 ccgtgggccg cgaagccgta ttaccggcga gctggtctgc ggtcccgaga cgctttccga
       61 ggacgagctt gcccgcaacc gcgaggagat gtgggccgag ctgctcgccc atcctctcga
      121 cgggccttat taccgcgagc ggtcggccga ctggtcaaag gtcacagtgc cgctgctttc
      181 cgccgccaac tggggcggcc aaggattgca cactcggggg aacttcgagg gcttcatgcg
      241 cgcggcctcc aagcacaagt ggctcgaggt gcatggcggc tcgcactggg cgccgtttta
      301 caccgattac ggcatcaaac tgcagaagcg cttcttcgac taccacctga agggcatcaa
      361 caatgactgg gaaagccaac cgcggatcca gctccaggtc cgccacattg atcgattcgt
      421 cgaacgccac gagaatgaat ggccgcttgc ccgcacacgc tggacttgct ttcatcttga
      481 tccgcacgac atgcgacttt cgccaaagcc tgtctcttcc gacaaatccc tcgagtacag
      541 cgcactcggc gacggcgtca ccttttccac gccgccgctc gaagcagaga ctgagatcac
      601 aggaccgtcg gcgctgaaac tgtttgtttc atcatcgacc gccgacaccg acattttcgc
      661 gatcttgcgc gtgtttgcgc cggagggcca cgaagttgtg tttcaaggcg cgctcgatcc
      721 gcatacgccg atcggccagg gttggctgcg cgcttcgcac agaaggctag aacgagcgct
      781 cagcacgccc tactgcccgt atcacacgca cgacgagatc cagccactca cgccgggtga
      841 gatcgcagaa ctggacatcg aaatctggcc cacttgcatc gtggttccgc gcggctaccg
      901 cgtcgcgctc acaatccgcg ggaaggatta cgaatacgac ggtccgggag caacgctgtc
      961 gaacatgaag aacgtcatgc gcggctgcgg gcctttcgtg catgatgacc ccgtcgatcg
     1021 cccgcccgcc gtattcggag gcaaggttac attgcacttc ggcccaaatc gatcggctca
     1081 tatagtgctg ccggtaattc caccgaaata gaccccaagg aaacagaagc catgaagcaa
     1141 cgaagaaaaa ccaatgcacg aaaacgggcc gccgtcctgg cacggcgttc gcggcatata
     1201 atccccgcca tcgacattca cgcccacttt gtccctgaag agtatctccg gctcatcgag
     1261 gcggaaggag aaccgtacgg cgtgaggctg cgccccggtg cgaatggacc gatgatcgtc
     1321 gtaggtcagg cggtaatcgg ccccatcacc gcgcactacc acaatctcga tgtacggctg
     1381 aaagcaatgg acgcgcaaag ggtaaccgtt catgctctct cgctcaatcc gccgatggtc
     1441 tattgggcgg ataatgctct cggtttgcgt ctcgccaggc tcgtcaacga cgcattggcc
     1501 gaagcgaacc gggcgcatcc agaccgcttc gtggcgctgg caacccttcc cttgcaagat
     1561 cccgaggcgg ccgtcactga agcggagcgc gctgtcacgg agctcggttg ccgcggcatc
     1621 tatctcggca ccaatgtccg gggaaaagag ctgtccgact cttcattcct gccagtcttc
     1681 gagcggattc atgctctggg agccccgatt tttctccatc catttaatgt catcggc
//
LOCUS       DATDHO010000367         1998 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_413944, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000367 DATDHO010000000
VERSION     DATDHO010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413944"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1005)
                     /locus_tag="VIY07_07150"
     CDS             complement(<1..1005)
                     /locus_tag="VIY07_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009467584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381568.1"
                     /translation="MLYREAGQFKTSYATDQAIFPILQDRIGIIIILVIAFVGIPLIG
                     NDFLTNAVMIPFLIFSLAAIGLNLLTGYTGLLSLGTGAFMGVGAYACYKLTTIFPNVN
                     IIIWVIASGFFSAAVGVAFGLPSLRIKGFYLAIATLAAQFFLEWCFIRIPWLYNYNVS
                     AAIEVPQRELFGIIITGPRASAETRYLIVLTIVVIMTWMASNIVHGRIGRMWMAVRDM
                     DIAAELMGIRLLPTKLLAFAVSSFYCGVAGALLVFLWYGGAESTVFSINESFTVLFMI
                     IIGGLGSLLGSFLGAALIYILPIILRFVPPQLGLPLHAATVEHLTFMITGALIVFFLI
                     A"
     gene            complement(1012..1968)
                     /locus_tag="VIY07_07155"
     CDS             complement(1012..1968)
                     /locus_tag="VIY07_07155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381569.1"
                     /translation="MDLLYKIFLDPFVQMGTAPDLLVQTLWEGMVGGVLYALIALGFV
                     LIFKASGVFNFAQGIMVVFAALTLVGLYNAGIPAFLALGLTIAVMFALAFTVERVVLR
                     PLINQSDIILFMATFGLTYFLIGFGQFVFGGDPKVMITEQLYLPKGTVTYKALGGIIS
                     VQKLDIAAAVIASVMVAGLAVFFSKTRIGRALRAVADSHEAALSVGISLEQIWVIVWF
                     AAGLVALVTGIMWGARSDVSFALEVIALKALPVLILGGLTSIPGAIVGGLIIGVGEKL
                     WEFYWGPLIGGGTDSWFAFVLALVFLLFRPQGLFGERIIERV"
BASE COUNT          516 a          588 c          582 g          312 t
ORIGIN      
        1 cgcgataagg aagaacacga tcagggcacc cgtaatcatg aacgtcagat gttcgaccgt
       61 tgcggcgtgc aaaggcaggc caagctgggg cggcacgaaa cgcaggataa tcggcaggat
      121 gtagatcaac gccgccccga ggaaggagcc caggaggctt ccgagccctc caataatgat
      181 catgaacagg accgtgaaac tctcattgat cgagaagacg gtggactccg cgcccccgta
      241 ccagaggaag accaacagcg cgcctgcaac gccgcagtag aatgaagaca ctgcgaaggc
      301 gagcaatttc gtcggcagca ggcgaattcc catcagctca gcggcaatat ccatgtcgcg
      361 taccgccatc cacatgcggc caatgcgccc atgcacgata ttcgaggcca tccaggtcat
      421 gattacgacg atcgtcagca cgatcagata gcgcgtctcg gcgctcgcgc gcggaccggt
      481 gatgatgatg ccgaacagct cgcgttgcgg gacctcgatg gctgccgaca cattgtaatt
      541 gtaaagccag ggaattcgga tgaagcacca ttccagaaag aactgcgccg cgagggtcgc
      601 aatcgcgaga taaaaaccct tgatgcgcaa ggagggcagg ccgaacgcga caccgacagc
      661 cgcggagaag aagccggacg cgatcaccca tatgatgatg ttcacgttgg gaaagatcgt
      721 ggtcagcttg tagcaggcat aagccccaac tcccatgaaa gcgccggtgc cgagggaaag
      781 aagcccggta tagccggtga gcagattgag tccgatcgcc gccagcgaga aaatcaggaa
      841 tggaatcatc accgcgttgg tgaggaagtc attgccgata agcggaatgc cgacgaaggc
      901 gatgacgagg atgatgataa tgccgatgcg gtcttgcaga atcggaaaaa tcgcctggtc
      961 cgtggcgtag ctggtcttga actggccggc ctcgcggtaa agcatcgctt gtcacacccg
     1021 ttcgattatg cgttcgccaa acaggccttg tggccggaac agcaggaaca ccagcgcgag
     1081 gacaaaggcg aaccaggaat cggtgcctcc gccgatcaac ggcccccagt agaattccca
     1141 tagcttctca ccgacgccga tgatcaatcc tccaacgatg gcgccgggaa tcgaggtcag
     1201 gccgccgaga atgaggacag gcagtgcctt gagcgcgatc acctcgagcg caaacgagac
     1261 atccgagcgc gcgccccaca tgatccccgt aaccaatgcc acaaggccgg cggcaaacca
     1321 tacgatcacc caaatctgct cgagtgaaat gccgaccgac agtgcggcct cgtggctgtc
     1381 cgccaccgcg cgaagagccc gaccgatcct tgttttcgag aaaaacaccg ccaacccggc
     1441 caccatgacc gacgcaatga cggccgcggc gatgtcgagt ttctgcacgg agattatccc
     1501 gccgagcgcc ttgtaggtga ccgtgccttt cggcaggtaa agctgctcgg tgatcatgac
     1561 ttttgggtcg ccgccgaaga caaattgccc aaacccaata aggaagtagg tcagaccgaa
     1621 cgtcgccatg aacaggatga tgtcggattg gttgatcagc ggccgcaaga cgacgcgctc
     1681 gaccgtgaag gcaagcgcga acatcaccgc aatggtcaat ccaagcgcta gaaaggccgg
     1741 tatcccggca ttgtacagtc caaccagtgt gagcgccgcg aagaccacca tgatcccctg
     1801 cgcgaagttg aagacccccg aagccttgaa aatcagcacg aagcctagcg cgatcagcgc
     1861 gtaaagcacc ccgccaacca tcccttccca cagcgtctgc acgagcagat cgggcgccgt
     1921 gcccatttgc acgaaaggat cgagaaagat cttgtagagg aggtccatgc gtcctcagtg
     1981 ggccacgccg agataggc
//
LOCUS       DATDHO010000368         3349 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_216069, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000368 DATDHO010000000
VERSION     DATDHO010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3349)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3349)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3349
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216069"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..1070
                     /locus_tag="VIY07_07160"
     CDS             78..1070
                     /locus_tag="VIY07_07160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009032174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY6381570.1"
                     /translation="MIKARIASATVGVLFAAALASSPALAQQKLVLKATDVHPLGYPT
                     VEAVVQMGKKLEAATNGRLSVQMYPSMQLGGEKEMIEQAQVGALAIARISVGPMGPIV
                     PELNVFNLPFMFRDDAHMEKVIDGPIGDELLKKLSESKANLIGLCWMNAGTRNVYNSK
                     KPIQSVDDLKGLKIRMMGNPVFVDTMNSLGGNGVSMGFDQLINAMQTGVVDGAENNYP
                     TYESGQHYRYAKYYSKTGHLMIPEILVFSKKVWDELSKDDQALILKVAKEAQQEERKL
                     WYDREKESLKKMVESGAIVNEVADKKPFQAAVKPVWDKYGAQHEALIKRIQDVK"
     gene            1142..1660
                     /locus_tag="VIY07_07165"
     CDS             1142..1660
                     /locus_tag="VIY07_07165"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY6381571.1"
                     /translation="MKAQYFRLMDKVHQACLFIAGSCLVIITLIIPYGVFCRYVLNSA
                     ASWPEPLAILLMIVMSFLSAVVCYREHLHIGVGVLPAFLSEPAKSYLGWFLEVCMLVT
                     NLFMLWWGIKLVQTTWYQAIPEFPIVWVGLAYMPIPIGGALTTLLVIERFLTRKFFAE
                     PDPETVSQLQSE"
     gene            1676..2959
                     /locus_tag="VIY07_07170"
     CDS             1676..2959
                     /locus_tag="VIY07_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEY6381572.1"
                     /translation="MDIAILIGSFAIVCLLGMPVAYALGLAAILAALWVGIPLEAVML
                     KVSGGMSAFSLLAIPFFILAGAIMAVGGMAERLVNLAKVFVGFIRGGMALVNIVASTM
                     FGCISGSSVADTAAVGSVMIPQMIKNGYPRLFAVNVTISGSLQPLLVPPSHNMIIYSI
                     AAGGTISVAHLFMGGIIPALLLGLSLIILVLIIAHRNNYPKGEVIPFRQALKIALDAV
                     WGMITIAIILGGILSGVFTPTESAAVAVVYAFLVTMFVYRDVKWRQLPALIARVVRTV
                     GMVMIMIGFSIAFGYMMAIMRIPAMATEFFIAISSDKYTFLLYINILLLLLGTFMDLA
                     PMLLICTPIFLPVIKTFGIDPVHFGIIMILNLGIGLLTPPVGPTMVVGCAIGKVSMEA
                     VSRSILVFYIPMVIVLLLVTYIPALSLWLPRLVLD"
BASE COUNT          634 a          992 c          996 g          727 t
ORIGIN      
        1 catatgacct gataacatgc acggcggcat caaatcaatc ggccgtgccc gggacctcac
       61 cagggaggaa ggtactcatg atcaaggctc gcattgcgtc cgcgaccgtc ggcgtgctct
      121 tcgccgcggc tttggcatcc agccctgccc ttgcgcagca gaagctcgtg ctcaaggcga
      181 ccgacgtgca tccgctcggc tatccgacgg tggaagcagt cgtgcaaatg ggcaagaagc
      241 tcgaggctgc aacgaacgga cgtctgagcg tccagatgta tccgtcgatg cagcttggcg
      301 gcgagaagga gatgatcgag caggcgcaag tcggagcgct cgcgatcgcg cgtatcagcg
      361 tcggtccaat gggcccgatc gtgccggagt tgaatgtgtt caacctgccc ttcatgttcc
      421 gcgacgacgc gcacatggag aaggtcatcg atgggccgat cggcgatgaa ctgctcaaga
      481 aactctcgga gtcgaaggcg aatctgatcg gattatgctg gatgaatgcc gggacgcgca
      541 acgtctacaa cagcaagaaa ccgatccaga gtgtcgacga cctgaagggg ttgaagatcc
      601 gaatgatggg caaccccgtg ttcgtcgaca cgatgaactc cctcggtggc aacggcgtct
      661 cgatgggctt cgatcagctc atcaatgcca tgcagaccgg cgtagtcgac ggcgcggaga
      721 acaactatcc gacctacgag agcgggcagc actatcgtta tgcgaagtac tactcgaaga
      781 ccggccacct gatgatcccg gagatcctcg tcttctcgaa gaaggtttgg gacgaattgt
      841 cgaaggacga ccaggctttg atcctcaagg tcgccaagga agcgcagcag gaggagcgca
      901 agctctggta cgaccgcgaa aaggaatctc ttaagaagat ggtcgaatcc ggggcaattg
      961 tgaacgaagt tgccgacaag aagccgttcc aggccgcggt caagccggtg tgggacaaat
     1021 acggtgcgca gcacgaagca ctgatcaagc gcattcagga cgtgaagtga cgcttcggaa
     1081 ttagagagcc ggcccgcgcc gacgaacggc gtcgggtcgg tttctttttt gtgaggggga
     1141 catgaaggcg caatacttcc ggctgatgga caaggtccat caggcatgcc tgttcatcgc
     1201 aggttcgtgt ctcgtaatca tcacgctgat catcccttac ggcgtgttct gccgctacgt
     1261 gctcaacagc gcggcgtcct ggccggagcc gctcgcgatc ttgctcatga tcgtgatgtc
     1321 gtttctgtcg gcggtcgttt gctatcgcga acacctgcat atcggcgtcg gcgttctgcc
     1381 tgcctttctg agcgaaccgg ccaagtccta tctcggatgg ttcctggaag tctgcatgct
     1441 ggtgaccaac cttttcatgc tctggtgggg catcaagctg gtccagacga cctggtacca
     1501 ggctattccg gaattcccga tcgtgtgggt tggcctcgcc tacatgccga tcccgatcgg
     1561 cggtgcgctc acgaccctgc tcgtgatcga gcgctttctt acgcgaaagt ttttcgcgga
     1621 gccggatccc gagaccgtca gtcaacttca gagcgaatag cgatcgggtc gggtcatgga
     1681 catcgccatc ctcatcggca gtttcgcgat cgtctgtctg ctgggcatgc cggtcgcgta
     1741 cgcgctcggc ctcgccgcca ttctcgcggc actctgggtc ggaattccac ttgaagcggt
     1801 gatgctcaaa gtgtcggggg gcatgagcgc tttctcgttg ctcgcaatcc cgttcttcat
     1861 tctcgccggt gcgatcatgg cggtcggggg catggccgag cgtctggtca atctagccaa
     1921 ggtgttcgtg ggctttattc gcggcggcat ggcgctggtg aatattgtcg cgtccacgat
     1981 gttcggctgt atctccggct catcggtcgc cgacacggcc gcggtgggct ctgtgatgat
     2041 cccgcagatg atcaagaacg gttatccgcg cctgttcgcg gtgaacgtca cgatttccgg
     2101 atcgcttcag cccctgctcg ttccgccatc ccacaacatg atcatctact cgatcgcggc
     2161 cggcggaacg atatcggtcg cacacctgtt catgggcgga atcattccgg cgctcctgct
     2221 cggtctgtcc ctcatcattc tcgtcctcat catcgcgcac cgaaacaatt acccgaaagg
     2281 agaagtgata ccgttccgtc aggcgctcaa gatcgcgctc gacgcggttt ggggaatgat
     2341 cacgatcgcc atcattcttg gcggcattct ctccggcgtt ttcacgccaa cagagtcggc
     2401 ggcagtcgcg gtcgtctacg cgttcctggt gacgatgttt gtctatcgcg acgtgaagtg
     2461 gcgccaactg ccggctctca tcgcgcgcgt cgtgcgcacg gtcggcatgg ttatgatcat
     2521 gatcggcttc tcgatcgcct tcggatacat gatggcgatc atgcgtattc cggcgatggc
     2581 gacggagttc ttcatcgcca tctcgagtga caagtatacg ttcctgctct acatcaacat
     2641 tcttcttctg ctgctcggca ccttcatgga tctggcgccg atgctcctga tctgcacgcc
     2701 tatcttcctg ccggtgataa agacattcgg catcgacccc gtgcacttcg ggatcatcat
     2761 gatcctcaat ctcggcatcg gcctgctcac ccctccggtg gggccaacca tggtcgtcgg
     2821 ctgtgcgatc gggaaggtgt cgatggaggc cgtctcgagg agcatcctcg tgttctacat
     2881 tccgatggtg atcgtgctct tgctggttac ctatattccg gctttgtcgc tgtggctgcc
     2941 tcgcctggtg ctggactgag cagggcatgc tggcacgcgg aagcccgcct ttccccgctg
     3001 acaccattca gcagattcgc cgccccgccc tggagtggac gcaagcgaac cggttagctc
     3061 cttgtccgga gccggtgatt tggacttgtc gaaaggaccg ccgtttaatg tggcgtaaac
     3121 caaacatctg cttgcagaca cgcaaccgcc gggtcgcggc gcccgggagc gccagccaac
     3181 ggcctagcca gttaagggcc tgtcggtcac tggccgacta gccccagcca acggcctagc
     3241 cggtcagggg cctgtcggcc actggccgac tagcttccct gccaggcaga tcgaggctaa
     3301 tcggcgcaac gccctcaagg gcaagcacgc tacaatgccg tccgacatt
//
LOCUS       DATDHO010000369         1978 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_64591, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000369 DATDHO010000000
VERSION     DATDHO010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64591"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..>1978
                     /locus_tag="VIY07_07175"
     CDS             186..>1978
                     /locus_tag="VIY07_07175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381573.1"
                     /translation="MVATRRFAAVATVWSLIAGPFFALPFSAGESQAKDPSGICEETS
                     AIAVLPSPVAPWKGAPLRVLFVAEHPLEGELSLVAPDGKLSTKSRERLGGQPYFWLAE
                     VASPAAGTWRATLARDRAPAECSTITREITVRNDEPPRPGTTSGSVWPVRTAWNRATE
                     NLFSAWIEKLFDAPLDASPSWPALHEVLRDRSRNFLFNHLGLGEDEMKMVLRPDCADL
                     PYFLRAYFAFKMGLPFGYSKCSRGGGGKPPKCFGWSGIQNAEAGKRPGLAASFSDYLR
                     TLGDGVHSGTGRTQANDDNTDYYPVSLKQETLRPGTVYADPYGHILMLVRRIPQAGGG
                     AGVFLAVDGQPDGTVARKRFWRGNFLFARDPALGSPGFKRFRPIVLENGALRRLTNGE
                     IAKNPQYADYSLDQSRLGIEAFYDRMDDVMSPAPLDPLRALKEAITALEEQVKARVTS
                     VENGRKFQNSGRGEAEMPDGAAIFETTGAWEDFATPARDLRLLIAIDVVRGFPERIAR
                     RPERYAMPRGKSVADVKAELDNMLASELAARKFSYTRSDGSSWTLSLKDVADRTTALE
                     MAYNLNDCVELRWGAPEKSEEASTCKRRAPSG"
BASE COUNT          367 a          564 c          666 g          381 t
ORIGIN      
        1 ttttcagcag tttggacggc cattgtggct gcctccgccg gcatccggtg cgcgcaaggg
       61 cttctttggc cgccggaata cttcatggac ggtggtaact tcgggcgagg cattttgcca
      121 ttattcagcc aacggttttg cggtattgtt cggggcaagg gaacctttcc aggaaggggg
      181 atcaagtggt tgcaacgcgc cggttcgctg cggtcgcgac ggtatggtcg ctgatcgcag
      241 gtccattttt tgctctccca ttctctgcgg gggagtcgca ggccaaagat ccatccggca
      301 tttgtgaaga gacgtcggcg atcgcggtct tgccgtcgcc ggttgcgccg tggaagggcg
      361 cgcctttgcg cgtcctcttt gtcgcggaac acccactcga gggcgagctt tcactggtcg
      421 cgcccgatgg gaagctctcg accaaatcgc gcgaacggct cggagggcaa ccgtacttct
      481 ggctggccga ggttgcttct ccggccgccg ggacctggcg ggcaacgctc gcccgagatc
      541 gggcgcctgc cgaatgcagc acgatcacgc gcgaaatcac cgtgcgaaac gacgagccgc
      601 cgcggccagg cactacttca ggcagcgtct ggccggtgcg gactgcttgg aatcgggcga
      661 ctgaaaacct gttttcggct tggatcgaga agctctttga cgcgccgctc gatgcctcgc
      721 cgtcatggcc tgcactgcat gaagtgctgc gcgatcgatc gcgcaacttc ctgttcaacc
      781 atttgggact tggcgaagac gagatgaaga tggtccttcg cccggactgc gccgatcttc
      841 catatttttt acgggcgtac ttcgcgttca agatgggatt gccgttcgga tactcgaagt
      901 gctcgcgcgg cggcggcggc aagccgccga agtgcttcgg gtggtcaggc attcagaatg
      961 ccgaggcagg aaaacggccc gggctcgctg cgtcattcag cgactatttg cgcaccttgg
     1021 gggacggcgt tcattccgga actggtcgaa cacaggctaa tgacgacaac accgactact
     1081 accctgtgtc gctgaaacag gagacgctgc gtccgggaac ggtttatgcg gatccctacg
     1141 ggcacattct gatgctggtg cggcgcatac cgcaagcggg tggcggagcg ggggtgttcc
     1201 tggcggtcga cggacagccc gacggaacgg tcgcgcgaaa acggttctgg cgcggcaatt
     1261 tcctgttcgc ccgggatccg gcgctcggca gcccgggatt caagcgcttt cggccgatcg
     1321 tgctcgagaa cggtgcgctg cggcgactga ccaacggcga gatcgcgaaa aatccgcagt
     1381 atgccgacta ttcgctggat cagtcgcggc tcgggatcga agccttttac gatcgaatgg
     1441 atgacgtgat gtcgccggcg ccgctcgatc ctttgcgtgc gctgaaggag gcgatcacgg
     1501 cgctcgagga gcaggtaaag gcgcgcgtga cgtcggtcga aaacggacga aaatttcaga
     1561 acagcggacg cggcgaggcg gagatgccgg acggcgcggc gatcttcgag acgaccggcg
     1621 catgggaaga cttcgcgacg ccagcgcgcg atctgcgtct attgatcgcg atcgacgtcg
     1681 tacggggatt cccggagcga atagcgcggc gtccggagcg gtatgccatg ccgagaggga
     1741 agagcgttgc ggacgtaaaa gcagaattgg ataacatgct tgcctctgag cttgcggccc
     1801 gcaagttttc ctacacgcgc agcgatggtt cgtcatggac gctgtcgctg aaggatgtcg
     1861 ccgaccgcac gacagcactg gagatggcat acaacctcaa cgactgcgtt gagctgcgat
     1921 ggggcgcccc cgagaagagc gaagaggcgt cgacgtgcaa gcgacgagcg ccctcggg
//
LOCUS       DATDHO010000370         4406 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_117236, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000370 DATDHO010000000
VERSION     DATDHO010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4406
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117236"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..2448)
                     /locus_tag="VIY07_07180"
     CDS             complement(28..2448)
                     /locus_tag="VIY07_07180"
                     /EC_number="1.2.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020044288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobic carbon-monoxide dehydrogenase large
                     subunit"
                     /protein_id="HEY6381574.1"
                     /translation="MNDTTPTSAERAEKLQGMGCKRKRVEDIRFVQGKGNYVDDLKLP
                     GMLYGDFTRSPHAHARVKKIDTAKAAAVPGVVAVITAETLKTVNLAWMPTLAGDVQMV
                     LADGKVLFQNQEVAFVIAEDRYTAADAADLVEVEYEALPCNVDPLKAMAADAPVIRED
                     VKDKKEGAHGPRKHYNHVFNWQAGEKAKADAAFAKADVTIKEMIVYPRVHPCPLETCQ
                     CVASFDKIKGELTLWGTFQAPHVIRTVGSLISKIPEHKIHVIAPDIGGGFGNKVGAYP
                     GYICAIVASIVTGRPVKWVEDRIENLSTTAFARDFYMETEIAATKDGKVTGLRCYTVA
                     DHGAFDACANATKWPAGLFSIISGSYDFPAAHVSVDGVYTNKAPGGVAYRCSFRVTEA
                     AYAIERAMDVMAQKLKMDPAEFRMKNLIRREQFPYTSTFGWVYDSGDYHTALTKAMET
                     VGYKKLREEQKKRQEAFKRGETRELMGIGVAFFTEIVGAGPSRNCDILGIAMFDSAEI
                     RIHPTGSGICRLGTKSQGQGHETTYAQIIATELGLPADNIKVEDGNTDTAPYGLGTYG
                     SRSTPVSGAATAMACRKIKAKAQMIAAYMLEVHDDDLEWDVDRFRVKGNPERFKTMTE
                     LAWAAYHEVPPGMEPGLEAINYYDPPNFTYPFGAYICVVDVDVDTGSTKVRRFYALDD
                     CGTRINPMIIEGQIHGGLTEAFGIAMGQEIHYDDDGNVTTASLMDYFLPTAVETPKWE
                     VDFTTTPSPHHPIGAKGVGESPNVGGVPCFSNAVNDAFAFLGSTNIPMPHDNWRTWMA
                     ADKLGLHP"
     gene            complement(2445..2945)
                     /locus_tag="VIY07_07185"
     CDS             complement(2445..2945)
                     /locus_tag="VIY07_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY6381575.1"
                     /translation="MAKSQVSMTVNGKKVEELVEPRTLLIHFLREQLNLTGPHIGCET
                     SHCGACTVDLDGKSVKSCTMFAVQANGADIRTIEGMAAADGTLHVLQDAFREMHGLQC
                     GFCTPGMITRAYRLLQENKNPTEEEIRFGIAGNLCRCTGYQNIVKAIQYAAAKINGVP
                     FQEAAE"
     gene            complement(2962..3828)
                     /locus_tag="VIY07_07190"
     CDS             complement(2962..3828)
                     /locus_tag="VIY07_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY6381576.1"
                     /translation="MIPGPFAYHRPTSVKDAVSLLGSLGEDARAIAGGHSLIPMMKLR
                     LASPAHLIDLSGVGDLRGIREDGRDIVVGAMTTQHELVGSELLTNKIPILRETSLQIA
                     DPQVRYVGTIGGNIANGDPGNDMPAVMMCLNATYHAMSKSGERRIAAREFYQGAYVTA
                     LKPGELVTAIRIPVPAAGHGYAYEKLKRKIGDYATAAAAVVLTMSGGKVATCSVGLTN
                     VAETPLWAEEAGKILTGSALDAATVKKAVAAAETITSPASDGRGPAAYRTKMAGVMLT
                     RAIARAKARAGA"
     gene            complement(4126..>4406)
                     /locus_tag="VIY07_07195"
     CDS             complement(4126..>4406)
                     /locus_tag="VIY07_07195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007702248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-propeller fold lactonase family protein"
                     /protein_id="HEY6381577.1"
                     /translation="KFIYSTERTTNKIALFTVAPGTGKLAYVANFATEAQPRGIRIDP
                     TGQYLIAAGEKSDRLSVYKIDQATGKLSEPNRYPAGNGANWVEIVEVQ"
BASE COUNT          803 a         1333 c         1318 g          952 t
ORIGIN      
        1 gccgcaaatt cagtgcggcc tgtattctca cgggtgcaga ccgagcttgt ccgcggccat
       61 ccatgtgcgc caattgtcat gcggcatcgg gatgttggtc gagcccagga aagcaaacgc
      121 gtcgttcacc gcattggaaa agcacggcac accaccgaca ttcgggcttt ctcccacgcc
      181 tttagcgccg atcggatggt gcggtgacgg cgttgtcgta aaatcgacct cccatttcgg
      241 ggtttcgact gccgtcggca ggaagtaatc catcaacgac gcggtggtca cgttgccgtc
      301 gtcgtcgtaa tgaatctcct ggcccatggc gatgccgaag gcttcggtca ggccgccgtg
      361 aatctgaccc tcgataatca tcggattgat gcgcgtgccg caatcatcga gcgcataaaa
      421 ccgccgcacc ttggtcgagc cggtatccac gtccacgtca acgacgcaga tgtaggcacc
      481 gaatggatag gtgaaattcg gcgggtcgta atagttgatc gcctccagcc cgggctccat
      541 tccaggcggg acttcgtggt aggccgccca ggcgagctcg gtcatagtct tgaaccgttc
      601 gggattccct ttcacgcgga aacggtcgac gtcccattcg agatcgtcat cgtggacttc
      661 cagcatgtag gcggcgatca tttgcgcctt cgccttgatc ttgcggcagg ccattgcggt
      721 cgcagcgccc gagaccgggg tcgaacgcga gccgtaagtg ccgagaccat acggcgccgt
      781 gtcggtgttg ccatcctcga ccttgatgtt atcggctggc aatcccagtt cggttgcgat
      841 gatctgggcg taggtcgtct cgtggccctg cccctgcgac ttggtgccaa ggcggcaaat
      901 gccggacccg gtcggatgga tccggatctc tgcggaatcg aacatcgcaa tgcctaggat
      961 gtcgcaattg cgcgacggtc ccgctcctac gatctcggta aagaatgcga cgccgatgcc
     1021 catcaactcg cgcgtctcgc cgcgcttgaa agcttcctgt cgcttctttt gctcttcgcg
     1081 gagcttcttg taaccgactg tctccatcgc cttggtcaga gcggtgtgat agtcgccgga
     1141 atcgtaaacc cagccgaacg tcgaggtgta cgggaactgc tcgcgccgga tgaggttttt
     1201 catgcggaat tcagccggat ccattttcag tttctgcgcc atgacatcca tggcgcgttc
     1261 aatggcataa gcagcttcgg tcacgcggaa cgagcagcga taagcgacgc cgcccggtgc
     1321 cttgttcgtg taaacaccgt caacggatac atgcgcggcc gggaagtcat atgagccgct
     1381 gatgatgctg aacaggccgg ccggccattt ggtggcattg gcgcacgcat cgaatgcgcc
     1441 gtggtcagcg acggtgtagc aacgcaggcc ggtcaccttg ccgtccttgg tcgccgcgat
     1501 ctccgtctcc atgtaaaagt cgcgcgcaaa agcagtggtc gaaagatttt caatgcggtc
     1561 ttcgacccat ttcaccgggc gaccggtcac gatcgatgcg acgatcgcac agatatagcc
     1621 gggataggcg ccgaccttgt tgccgaagcc gccgccgata tcaggtgcga tcacatggat
     1681 cttgtgctcg ggaatctttg agatcagcga accgacggtg cgaatgacgt gcggcgcctg
     1741 gaatgtgccc cacagcgtca gctcaccttt gatcttgtcg aaggatgcca cgcattggca
     1801 ggtttcgagc gggcaaggat gcacgcgcgg atagacgatc atctccttga tggtgacatc
     1861 ggccttcgca aacgccgcgt cagccttggc cttttcgcca gcctgccagt tgaagacgtg
     1921 attgtagtgc ttgcgagggc cgtgcgcgcc ctccttcttg tccttgacgt cctcacggat
     1981 taccggagca tcggccgcca tggccttgag cggatcgaca ttgcacggca atgcctcgta
     2041 ttcgacttcg accaggtcgg cggcgtccgc cgccgtgtaa cggtcctcgg cgataacgaa
     2101 agcgacctcc tggttctgga acaggacctt gccgtcggcc agcaccatct gcacatcgcc
     2161 ggcaagcgtc ggcatccagg cgagattgac ggtcttgagc gtttccgcgg tgatgaccgc
     2221 gactacgccg ggaaccgctg ccgccttggc cgtgtcgatc ttcttgacgc gggcgtgggc
     2281 gtgcggtgaa cgggtaaaat cgccgtacaa catgccgggc aacttgaggt cgtcgacgta
     2341 gttgcccttg ccttgaacga atcgaatgtc ttcaacgcgc ttgcgcttgc agcccatgcc
     2401 ctgaagcttt tcggcgcgtt cggcggaggt gggggttgta tcgttcattc tgcggcctcc
     2461 tggaacggca cgccattgat tttggcggca gcgtattgaa tggctttgac gatgttctgg
     2521 tagcccgtgc atcggcacag gttgcctgcg atgccgaagc gaatttcctc ctcggtcgga
     2581 ttcttgtttt cctgcagcag gcggtaggcc cgcgtgatca tgcccggcgt gcaaaacccg
     2641 cactgcaggc cgtgcatttc acggaaagcg tcctgcagca cgtgcagcgt gccgtccgcc
     2701 gcggccatgc cttcgatggt gcggatatcg gcgccgttcg cctgcaccgc gaacattgtg
     2761 caggatttca ccgacttgcc gtcgagatcg accgtgcagg cgccgcagtg gctggtttcg
     2821 caaccgatat gcggacctgt aagattcaat tgctcgcgca ggaaatggat gagcagcgtg
     2881 cgcggttcga ccagttcctc cactttcttg ccattcacgg tcatggaaac ctgcgatttc
     2941 gccattggtc cctcccgaaa atcaggcgcc cgcgcgcgct ttggcgcggg cgatggcgcg
     3001 ggtcagcatc acgcccgcca tttttgtccg gtacgccgcc ggcccgcggc catcggaggc
     3061 cggcgacgtg atcgtttctg cagctgccac cgcctttttc acggtcgcgg catcgagcgc
     3121 cgaaccagtc aggatcttcc cggcttcttc agcccacagc ggcgtttccg cgacgttggt
     3181 caggccgaca gagcaagtgg cgaccttgcc gccactcatg gtcaatacga ccgctgctgc
     3241 cgccgtcgcg tagtcgccga tcttgcgctt cagtttctcg taggcataac cgtgtccggc
     3301 cgccggcacc ggaatgcgaa tggcagtcac aagctcgccc ggcttcagcg ccgtcacata
     3361 cgcgccctgg taaaattcgc gcgccgcaat gcggcgctcg ccggatttgc tcatggcgtg
     3421 atatgtcgca ttgaggcaca tcatgactgc cggcatgtca ttgccggggt cgccattggc
     3481 gatgttgcct ccgatcgtgc ccacataacg aacttgcgga tctgcaattt gcagcgaggt
     3541 ttcgcgcaag attggaatct tgttggtcag cagttccgag ccgacaagct catgctgtgt
     3601 cgtcatcgct ccaacgacga tgtcgcgacc gtcttcgcga atccccctga gatcgccaac
     3661 gccggaaaga tctatgagat gcgccgggct cgcgagccgc agtttcatca ttgggataag
     3721 actatgcccg ccggcaatgg cacgggcgtc ttcgcccagg ctgcccagta ggctgaccgc
     3781 atccttgaca gatgtgggac gatggtaggc aaacggccca ggtatcatag gcatacctcc
     3841 ccggacgccc cgaccggtcg gcttttacag cccactcgca gtccctgagg cgggcatcct
     3901 gttaatatga ttgccggaag cgtgacgaaa gtgcgtcgca gcagcagtac gcgggctgca
     3961 aacggtgtcc tcttccggtt cgcgatgttc gtcgcagcga cggcaagtat aagttggaac
     4021 aatcctgatt caaatatagt tctgccgcat cggacaaaaa cagagccccg gacattggtc
     4081 cggggctctg caccgcatgc gagctgttag tgggtgtacc accgctcact gcacctcgac
     4141 gatctcgacc cagttcgcgc cgttgccggc cggatagcga ttgggctcgc tcagctttcc
     4201 ggtggcttgg tcgatcttgt agaccgacag gcgatccgac ttttcgcccg ccgcaatgag
     4261 atattggccg gtgggatcga tcctgattcc gcgcggctga gcctcagtcg cgaaatttgc
     4321 aacgtaggca agcttgcccg ttccaggcgc gacggtgaac aacgcgatct tgttggtcgt
     4381 tcgctccgtc gaataaatga atttgc
//
LOCUS       DATDHO010000371         5874 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_216200, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000371 DATDHO010000000
VERSION     DATDHO010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5874
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216200"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..487
                     /locus_tag="VIY07_07200"
     CDS             <1..487
                     /locus_tag="VIY07_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6381578.1"
                     /translation="FGRKAPLGAFLADHFGIVFSFRWTGAALACGIMAFPLMVRAIRL
                     SVEAIDRRLEDAAATLGANSVWTFITVTLPLALPGIIAGMMLAFARALGEFGATITFV
                     SNIPGETQTISAAIYTLLQVPGGDADALKLVVISLVICFAALLASEWLARRATARLHG
                     A"
     gene            490..1179
                     /gene="modC"
                     /locus_tag="VIY07_07205"
     CDS             490..1179
                     /gene="modC"
                     /locus_tag="VIY07_07205"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein"
                     /protein_id="HEY6381579.1"
                     /translation="MLAVQVEKTLGETFSLKAAFTSASRATALFGASGAGKTSVINMI
                     AGLLKPDRGRIELDGEVLFDEAERIDLPAFRRRIGYVFQEGRLFPHLSIRRNLDFGRW
                     MSGQKEDGKLFSHVVEMLDIGQLLDRRPGKLSGGERQRVAVGRALLMRPRLLLLDEPL
                     ASLDVARKRDILPYLERLRDGAQVPMIYVSHNPAEVKRIASRVVCLDAGKVVAAGGPE
                     LLDAAHIDVLA"
     gene            1183..1980
                     /locus_tag="VIY07_07210"
     CDS             1183..1980
                     /locus_tag="VIY07_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-binding protein"
                     /protein_id="HEY6381580.1"
                     /translation="MFPPQRIVCLTEETVETLYLLGEEDRIVGVSGYAVRPAQVRREK
                     PRVSAFISADIPKILALKPDLVLTFSDLQADIVAELIRNNVAVHAFNQRDVAGIFDMI
                     RVLGALVGASDKAETLARSLAARVNAVHERALSLPCRPRVYFEEWDEPMISGIAWVSE
                     LIEAAGGIDVFPHLAERKNAKDRIVSADAVIAARPDIIVGSWCGKKFVPAKVAARPGF
                     ADVPAVGAGWLREIKSTLILQPGPAALTEGLDQLARIVSEWVEQHTT"
     gene            2067..2612
                     /locus_tag="VIY07_07215"
     CDS             2067..2612
                     /locus_tag="VIY07_07215"
                     /inference="COORDINATES: protein motif:HMM:NF042461.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6580 family putative transport protein"
                     /protein_id="HEY6381581.1"
                     /translation="MQLNKTRSDIWMDLLLVALLIGLNVATRLLPHVPGVLPVAASGL
                     FAARVLCIPALALIVPLLGMALSDMALPGEDWRIALVGFVAISIPALAGIFTRRWHGA
                     LPVAATMVACSLLFFLLSNGAVWAFSGMYPPTWQGLTQCYIAALPFLEKTVLGDLFWT
                     AVLFGGAWLVQHRPSFSRRAL"
     gene            complement(2609..4387)
                     /locus_tag="VIY07_07220"
     CDS             complement(2609..4387)
                     /locus_tag="VIY07_07220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HEY6381582.1"
                     /translation="MSSLDAVSLAILLGSLLVLTGILSSLIALRFGAPLLLVFLLVGM
                     LAGEGGPGGIKFDDVGATYTVGSIALALILFDGGLRTRFASLRNVLWPAVMLSTVGVL
                     ITTLLTAPVAKFALGIGWIESMLIGAVVASTDAAAVFFLINARGLRLRPRVRAVLEVE
                     SGTNDPFAIFLALILVEILLLGGQTWSHALMSFVREAVLGFIIGFAGGQIIVLVLNRM
                     ALAQGLHAPFVAVSALVVFAFANAVYASGFLAVYLAGLVVGNNQTRAHNSVVVFLDAV
                     TWLSQIVMFVMLGLLAWPHRLTETLFGAIAVALMLMFVARPAAVFLCLAPFKFHLNEK
                     IFISWVGLRGAVGIFLASIPLLVGVPGAHIYFDVAFVVVLLSLLVQGWTVAVAARRLD
                     IAFTRADITPRRVELDLPGQLAREIVGYPVPANSPFLRRGLIPNWARPTLVIRNEEIL
                     TPTEAEPVREGDYIYLLAPPEKAQALDRFFVRMPPPALPDPRLLGDFFVPGTATLGAL
                     AEIYGLQVAADHTDVTLADYFSEQLRRRPRIGDIVALGPIALLAHKVDGGTVTTVGLR
                     LAEPEASNDLAGRAKALWKRAQAYFD"
     gene            complement(4466..5401)
                     /locus_tag="VIY07_07225"
     CDS             complement(4466..5401)
                     /locus_tag="VIY07_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HEY6381583.1"
                     /translation="MAKSRKVVITCAVTGSIHTPSMSPHLPVTAQEIADAAIGAAEAG
                     AAIVHLHARNPQDGRPDQTPEAFAPFLKVIKQRSNVVVNITTGGAPTMTAEERVRPAA
                     TFKPEVASLNMGTMNFGLYPMIPRYKGKFKYDWEEPYLENSKKGMFKNTFADIEYILT
                     TCAGNGTRFEIECYDIGHLYTLRHFLDRGLVKPPLFVQSVFGILGGIGPHPEDVMMMK
                     RTADRLLGDNYHWSVLGAGANQMRVAAIAAAMGGNVRVGMEDSLWIGAGKLAESNAQQ
                     VTQVRKILEGLGLDIATSDEAREILSLKGGDKVAF"
     gene            5514..>5874
                     /locus_tag="VIY07_07230"
     CDS             5514..>5874
                     /locus_tag="VIY07_07230"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEY6381584.1"
                     /translation="MAAPEKVHRPTLIIGIVCGTLAALAWAAGFVVAKHGIEIGFSPA
                     DIAFHRFFWSGLLVLPLIVRDGLRDLGGIGWGRGLVLSILSGPPQSLLAYSGFILVPL
                     GHGTTIQPACAALSGMVL"
BASE COUNT         1144 a         1825 c         1761 g         1144 t
ORIGIN      
        1 cttcggtcga aaggcgccgc tcggtgcctt tcttgccgat catttcggta tcgtgttttc
       61 gttccgctgg accggcgccg cacttgcatg cggcatcatg gcatttccgc tgatggtgcg
      121 ggcaatccgc ttgtcggtcg aagccatcga ccggcgactg gaagacgcag cggcaacact
      181 gggcgccaat tccgtctgga ctttcatcac ggtcacgttg ccgctggcgc tgccgggcat
      241 aattgccggc atgatgctcg ctttcgcgcg cgcgctcggc gagttcggcg ccacaatcac
      301 cttcgtgtcc aacattccgg gcgaaacgca aacgatatcc gcggcaatct atacgctgct
      361 tcaagtgccg ggcggggacg cagatgctct caagctcgtc gtcatatcgc ttgtcatctg
      421 cttcgctgcc ctgctggcgt cggaatggct ggcacggcgc gcaacggcgc gcctccacgg
      481 ggcttagcca tgcttgccgt tcaggtcgaa aagacgcttg gcgagacttt ctccttgaag
      541 gcggcgttca cgagcgcaag ccgggcaaca gccttgttcg gggcatcggg tgccgggaaa
      601 accagcgtga tcaacatgat cgccggcctg ttgaagccgg accggggccg catagagctg
      661 gatggcgagg tgctgttcga cgaagccgaa cgcatcgacc tgccggcgtt tcgccggcgt
      721 attggctacg tgtttcagga aggccggttg tttccgcatt tgtcgatcag gcgcaatctc
      781 gacttcggcc gctggatgag cggccaaaag gaggacggca aattgttcag ccacgtcgtg
      841 gaaatgctcg atatcggcca gctgctcgat cgtcggcccg gcaagctgtc gggcggcgaa
      901 cgccaacgtg tcgcggtcgg ccgagccttg ctgatgcgcc cgcgcctgct gctgctcgac
      961 gagcctcttg cctccctcga cgtcgcgcgc aagcgcgaca ttcttcccta tcttgaacgc
     1021 ctgcgtgacg gggcgcaggt gccgatgatc tatgtcagcc acaatcccgc cgaggtcaaa
     1081 cgcattgcca gccgcgtggt ttgcctcgac gccggaaagg tcgtcgcagc gggtggaccc
     1141 gagctgctcg acgcagccca catcgatgtg cttgcttaag gcatgtttcc cccgcagcga
     1201 atcgtttgcc tgaccgagga aaccgtcgag acgctttatc ttctcggcga ggaagaccgc
     1261 attgtcggcg tgtcaggcta tgccgtgcgg cctgcccagg ttcgacgcga gaagccgcgg
     1321 gtctcggcgt tcatctcagc cgacattccg aagattctcg cgctcaagcc agatcttgtc
     1381 ctgacctttt ccgatctgca ggccgacatc gtcgccgagc tgatccgcaa caatgtggcc
     1441 gttcacgcct tcaatcagcg tgacgtcgcc ggcatcttcg acatgatccg cgtgcttggt
     1501 gcattggtcg gcgcgagcga caaagccgag acgctggcgc gctcgcttgc cgcgcgagtc
     1561 aatgccgtgc atgaacgcgc actcagcctg ccgtgccggc cgcgcgtcta tttcgaagag
     1621 tgggacgaac ccatgatctc cggcatagcc tgggtgtcgg aattgatcga ggccgccggc
     1681 ggaatcgacg tgttccccca ccttgccgag cgcaagaacg ccaaggaccg catcgtatct
     1741 gccgatgccg tgatcgccgc gcgccccgat atcatcgttg ggtcctggtg cggaaagaaa
     1801 ttcgttcctg ccaaggttgc agcgcgtccc ggctttgccg atgttcccgc cgtcggcgcc
     1861 ggctggctgc gcgagatcaa atcaaccctt attcttcagc cgggccccgc tgcgctgacc
     1921 gaggggctcg atcagctggc tcgaatcgtt tccgaatggg tcgaacaaca cacgacctag
     1981 gccgatgaat cttgcgacgg gtggtaggaa gtccgcaccc cgccgtgcta tgtagtgagt
     2041 gaactcacgc aacccggatg actgaaatgc agctgaacaa gacccgaagc gacatttgga
     2101 tggacttgct gctggtggca ttgctgattg gcctgaacgt ggcgactcgc ctgctgccgc
     2161 acgtaccggg cgtcctgccg gtggcagcca gtggcctgtt tgccgcgaga gtcttgtgca
     2221 tccctgcatt ggctctgatc gtgcctttgc ttggcatggc tctgagcgac atggccctcc
     2281 cgggcgagga ttggcgcatc gcgctggtag gttttgttgc gatctcaatc ccggcgctcg
     2341 ccggaatttt cacaaggcgc tggcacggcg ctttgccggt cgctgccacg atggtggctt
     2401 gctcactcct gttcttcctg ctgtccaatg gcgccgtctg ggcattcagc ggcatgtacc
     2461 cgcccacatg gcaaggcctg acgcagtgct acatcgcggc tctgccgttc ctcgaaaaaa
     2521 ccgtgcttgg cgatcttttc tggacggcgg tcctgttcgg cggcgcctgg ttggtacagc
     2581 acaggccgtc attctcgagg cgcgctctct agtcgaaata cgcctgcgcg cgtttccaca
     2641 gcgctttggc tcggccggca aggtcgtttg acgcttccgg ctcggcaagg cgcaggccca
     2701 ccgtcgtgac cgtgccgccg tcgaccttgt gcgccagcaa tgcgatcgga ccaagcgcga
     2761 caatgtcgcc gattctcggg cggcgcctga gttgttcgct gaaataatca gcgagcgtta
     2821 catcggtgtg atccgcagcg acctgcaggc catagatttc cgctagcgcc cccaatgtcg
     2881 cagtcccggg cacgaaaaag tcgccgagca gccgcggatc gggcaatgcg ggcggcggca
     2941 tcctgacgaa aaaacgatcg agtgcctggg ccttttccgg cggcgcgaga agataaatgt
     3001 agtcgccctc gcgcacaggc tccgcttcag taggcgtaag aatctcctcg ttccgaatga
     3061 ccagggtcgg tcgcgcccag ttcgggatta ggccgcggcg gagaaatggg ctattcgcag
     3121 gcacgggata gccgacgatc tcgcgcgcga gctggcccgg cagatcaagc tcgaccctgc
     3181 gcggagtgat atcggcgcgc gtgaaggcga tgtcgagtct gcgggcggcc accgccaccg
     3241 tccagccctg caccagcagt gacaacagca cgacgacgaa cgcaacgtcg aagtaaatgt
     3301 gcgctcctgg cacgccgact agcagcggaa tcgaagcaag gaagatgccc actgcaccac
     3361 ggagtcctac ccaggatatg aaaattttct cgttcagatg aaacttgaac ggcgcgaggc
     3421 acaaaaatac tgccgcagga cgcgcgacga acataagcat aagcgccacc gctatggcgc
     3481 cgaacagggt ttcggtgagc cgatgcggcc acgccaacaa cccgagcata acaaacatca
     3541 cgatttgcga cagccatgtg acggcatcaa gaaatacgac gacagaatta tgcgcacgcg
     3601 tctgattgtt gccgaccacc agcccggcaa gataaacggc caaaaacccc gacgcataca
     3661 ccgcattggc gaaagcgaaa acaacgagcg cactgactgc cacaaatggc gcgtgcaagc
     3721 cctgcgccaa cgccatccga ttgagaacca atactatgat ttgaccaccg gcaaagccga
     3781 tgatgaaacc aaggacggcc tcgcgcacga agctcatcag cgcgtgcgac caggtttgcc
     3841 cgccaagcaa caatatctcg accaggataa gcgcgagaaa gatcgcaaac ggatcgttgg
     3901 tgcccgactc gacttcgagt acggcacgca ccctcggccg cagtctcaag cccctggcat
     3961 tgatcaggaa gaacacggcc gctgcgtcgg tcgaggccac aacagccccg atcaacatgg
     4021 actcgatcca tccgatgccg agggcaaatt ttgccaccgg agcggtcagc agcgtggtga
     4081 tcagcacgcc tacggtcgac agcataactg ccggccatag tacgttcctc aagctggcaa
     4141 aacgggtacg taggccgccg tcgaacagga tcaatgcaag cgcgatcgaa ccgaccgtat
     4201 aggtagcgcc aacgtcgtca aacttgatgc ccccgggccc gccttcgccg gcgagcatgc
     4261 cgacgagcag aaagaccagc agcaggggtg cgccaaatcg cagcgcgata aggctcgaca
     4321 ggatgccggt gagaaccagc aggctgccca gcaatatggc gaggctgacc gcgtcaagcg
     4381 aactcattcc acgaatctcc ttccgctata ggaaggtttc gcgggcgcaa gagcaacgga
     4441 aactttgccg ctgctcagtc gacagtcaaa atgccacctt gtcgccgccc ttgagcgaaa
     4501 ggatctcgcg cgcttcgtcc gatgtcgcga tgtcaaggcc gagcccctcg agaatctttc
     4561 gcacctgggt cacctgctga gcgttcgatt cagccagctt gccggcacca atccagagcg
     4621 aatcctccat gccgacccgg acgttgccgc ccattgcggc ggcaatggcg gcgacccgca
     4681 tctggttggc gcctgcgccg agcaccgacc aatgataatt gtcgccaagc agacgatcgg
     4741 ccgtgcgctt catcatcatc acatcctccg gatgcgggcc gatgccgccg agaataccga
     4801 atacggattg tacaaataac ggcggcttca ccaagccgcg gtcgagaaag tgtcgcagcg
     4861 tatagagatg cccgatgtcg tagcactcga tttcgaagcg ggtgccgttg cccgcacacg
     4921 tggtcagaat gtattcgatg tcggcaaacg tgttcttgaa catgcccttc ttcgaatttt
     4981 cgagatacgg ctcttcccaa tcatatttga acttgccctt gtagcgcggg atcatcgggt
     5041 acaagccgaa gttcatcgta cccatgttca gcgaagcaac ttccggcttg aaggtcgcag
     5101 ccggccgcac gcgctcttct gcagtcattg tgggtgcgcc gccagttgtg atgtttacca
     5161 ccacgttgga acgctgcttg atcaccttga ggaatggagc aaaggcctcc ggcgtctggt
     5221 ccgggcgacc gtcctgggga ttgcgcgcat ggaggtgcac gatcgccgcc cctgcctcag
     5281 ctgccccgat ggcggcatcc gcgatttcct gcgccgtcac cggaagatgc ggtgacatcg
     5341 acggcgtgtg gatcgagccg gtaacagcac aggtaataac gactttgcgc gacttcgcca
     5401 tgactttcca tccaatgaag tgagggttgc tgattggcaa atggacttcg tcatcgatcc
     5461 tagagtatca gccatagcga agtcaccctg ctcggcttga ccctttgaac gccatggccg
     5521 cacccgagaa agtgcatagg ccgacactga tcatcggcat cgtctgcggc acgctggcag
     5581 ccctcgcgtg ggcggcaggc tttgtggtcg cgaagcacgg gatcgagatc ggcttttcac
     5641 ccgcggatat cgcgtttcat cgcttcttct ggtcgggcct gctggtgctg ccgctgatcg
     5701 tgcgtgacgg cttgcgcgat cttggcggca tcggctgggg acgtggtctt gtgttgagca
     5761 tcctgtcggg ccccccgcag tcgctgctcg cctatagcgg cttcatactg gtgccgctcg
     5821 gtcatggcac cacaatccaa ccggcttgcg cggctctgtc aggcatggtc ctcg
//
LOCUS       DATDHO010000372         2355 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_64723, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000372 DATDHO010000000
VERSION     DATDHO010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_64723"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VIY07_07235"
     CDS             <1..262
                     /locus_tag="VIY07_07235"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY6381585.1"
                     /translation="VSIAGREGGYGNMVEISHGNGLATRYGHLSEISVKIGQVVRIGE
                     IMGRIGSTGRSTGPHLHYETRVKGEAVDPQKFLRAGLRLGDV"
     gene            complement(263..1394)
                     /gene="prfB"
                     /locus_tag="VIY07_07240"
     CDS             complement(join(263..1324,1326..1394))
                     /gene="prfB"
                     /locus_tag="VIY07_07240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502756.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEY6381586.1"
                     /translation="MRAETQSLVEEIKQSVRLLRRHLDVDAATRRLAELNKESEDPNL
                     WNDQQRAQRIMRERDALDDQLKAIGRIEQELEDQLTLLELGEAEKHEGTIAEAEAALK
                     RLKVEVARRELEALLSGEADPNDCYLEVHAGAGGTESQDWASMLMRMYVRWAEAHGYK
                     VEWIEETEGEGAGIKSATVVVKGHNAYGWLKSENGVHRLVRISPFDANARRHTSFASV
                     TVYPVVDDRIKIDIKESDVRTDVMRSGGAGGQHVNKTESAVRLTHVPTNIVVKCQSDR
                     SQHRNRSMAWDMLRAKLFEIEIKKREEKAAAEQAAKTDIGWGHQIRSYVLQPYQMVKD
                     LRTGVSTSNTAGVLDGDLDEFMQAALAQKAFGGAPEQVEDVD"
     gene            1568..2071
                     /locus_tag="VIY07_07245"
     CDS             1568..2071
                     /locus_tag="VIY07_07245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008126293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEY6381587.1"
                     /translation="MGLFTKDIQTLDDLFVHQLRDIYYAEKQIVQSLPDMIEKATDSN
                     LKRGFETHLGETKTHVKRLEQVFKMHGVEAKGIDCPAIDGIIEEADDVVADVEDKKVL
                     DAALIAAAQAVEHYEITRYGTLIAWAKQLGRPDCASVLQQNLDEEKATDAKLTSLAER
                     NVNVKAA"
BASE COUNT          486 a          699 c          658 g          512 t
ORIGIN      
        1 ggtgagcatc gccggtcggg agggcggcta tggaaacatg gtcgagatca gccatggcaa
       61 cggacttgcg acccgctacg gccatttgtc cgagatcagc gtgaaaatcg gccaggtcgt
      121 ccgtatcggc gaaatcatgg gcaggattgg atcgaccggc cgctcgacag gtccacacct
      181 tcactatgag actcgggtca agggcgaggc ggtcgatccg cagaaatttc tgcgcgcagg
      241 attaaggctg ggcgacgtct agctagtcca catcttcgac ctgttcaggc gcgcccccga
      301 aagctttttg cgcaagcgct gcctgcatga attcatcgag atcgccatca agcacgcccg
      361 ctgtattcga cgtcgaaacg cccgtgcgca ggtcctttac catctggtag ggctgcaaca
      421 cgtacgaccg gatttgatgg ccccaaccga tgtcggtctt ggcggcctgc tcggcggccg
      481 ccttctcctc gcgctttttt atttcgattt caaacaactt tgcacgaagc atgtcccagg
      541 ccatcgagcg attgcgatgt tgggaacgat cgctctggca tttcaccact atgtttgtcg
      601 gaacatgcgt gaggcgcacc gccgactcgg tcttgttgac gtgctggccg ccggcaccgc
      661 ccgaccgcat gacatcggta cgcacgtcgc tttccttgat gtcgatttta atgcggtcat
      721 cgaccaccgg atagacggtt acgctggcaa atgaggtgtg gcgtcgcgcg ttggcatcga
      781 aaggcgaaat gcgcacgagg cgatgcacgc cattctcgct cttcagccat ccataggcat
      841 tgtggccttt gacgacgact gtcgccgatt tgattccggc cccctcgcct tccgtttctt
      901 cgatccactc taccttgtac ccgtgcgcct cggcccagcg gacgtacatg cgcatgagca
      961 tgctggccca gtcctggctc tctgtcccgc ctgcgccggc gtgaacttca agatagcaat
     1021 cgttgggatc ggcttcgccc gacagcaatg cctcaagctc gcgccgagcg acctcgacct
     1081 ttaggcgttt aagcgcggcc tctgcctcag cgatcgtgcc ttcgtgcttt tcggcctctc
     1141 caagctcgag caatgtcagc tggtcttcaa gttcctgttc gatccggcca atcgccttga
     1201 gctgatcatc aagcgcgtcg cgctctcgca tgatgcgttg cgcgcgctgc tggtcgttcc
     1261 aaagattcgg atcctcggat tccttgttca gttcagcaag gcgccgggtc gcagcatcga
     1321 cgtcaaagat gcctcctcag cagccgcacg gactgcttga tttcctcgac aaggctctga
     1381 gtttctgcgc gcatcgatgc ttccctggct cgaattgttc cgccatgtag cctcccgcaa
     1441 cccgtcctgc aaccctcatc ctgagcgcag caagggaacc gcgccgatgc cggaaccatg
     1501 ggcgtaacca tgaattgacc ttgacgagca tgcgctctcc caaaaaatca caaacaacga
     1561 ggatcacatg ggcttgttta ctaaagacat ccaaactctc gatgacctgt tcgtgcatca
     1621 gctgcgggac atctactacg ccgaaaagca gatcgtgcag tcgttgccgg atatgatcga
     1681 aaaagcgacc gattcgaacc tcaagcgagg gttcgagacg catctcggtg aaaccaagac
     1741 tcatgtcaaa cgactggagc aggtgttcaa gatgcacggc gtcgaggcca aggggattga
     1801 ttgcccggcg attgacggaa ttatcgagga agccgacgac gtcgttgccg atgtcgaaga
     1861 caagaaagtg ctcgacgcag cattgatcgc tgcggcgcag gcggtggaac attatgagat
     1921 tacccgctac ggcacattga tcgcgtgggc gaaacaactc ggccggcctg actgcgccag
     1981 tgtcttgcaa cagaaccttg atgaagaaaa agccaccgat gcgaagttga cgtcgctcgc
     2041 cgaacgcaat gtaaatgtga aagccgcata acaggcagcc aaactaacgt ctaagcgcat
     2101 gtttctattg ttttattttt agaggccccg tccacagtct acaatcgcgt caacggtcga
     2161 tttggggcca acttttcctc accgcttgcc gttgctggcc gggtgttgct tgccatcctg
     2221 agcggggccg ccgcaagggc gaagagcagc gaccccgtac accgaccctt gggagggggt
     2281 gagagagaat cggtgactgc tacatcctgg cacttcctaa cgctgggttc agttcggtgt
     2341 ccgacgtacg ggaac
//
LOCUS       DATDHO010000373         2177 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_117326, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000373 DATDHO010000000
VERSION     DATDHO010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_117326"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(158..973)
                     /locus_tag="VIY07_07250"
     CDS             complement(158..973)
                     /locus_tag="VIY07_07250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009469400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HEY6381588.1"
                     /translation="MTVRIEKDGSVWTVIHDRPEARNAMDPKSADALTAAFLEFDADK
                     NASVAVLHGAGGAFCAGWDLKYVSTLNADYPLGELDIPTARPRGNGGEIPRGPLGPTR
                     LELDKPVIAAIEGPAVAGGMELGLWCDFRVMAEQSYFGVYCRRWGVPLIDGGTVRLPR
                     IVGQGRALEIILTGRKVPAEDCLNIGLCEYVTPKGGARKRAEELAHEIARFPQVCVRA
                     DRRSAIKGHGLTVREALIQEWYNGRQALIEDGVAGASRFKDGLGRHGDFSKIR"
     gene            complement(1069..2001)
                     /locus_tag="VIY07_07255"
     CDS             complement(1069..2001)
                     /locus_tag="VIY07_07255"
                     /inference="COORDINATES: protein motif:HMM:NF013530.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY6381589.1"
                     /translation="MARILVTGASGFVGRALVDELANAGHVVRAAMRQPADIFPRSVE
                     VVAVADLTRPFEWRPLLRDVETVIHLAGIAHAESQIAEQAYDRVNRLATAELATAARA
                     HGIKHLIFMSSIRAQSGPASIEALRETDSPRPTDAYGRSKLAAEEAVRSAGVPFTILR
                     PVLIYGPGVKGNFARLMELARKPWPLPLGLCRNRRSLLSRRSLIDAVHLVVASPAAKG
                     QTYIVADRAPLTLAEIIAALRAGEGRRAGLLPVPPSLIGLAARRAGRAEEWQRLGGTL
                     VADPAKFVQAGWKPADTRAGLAELVRATIAQSAA"
BASE COUNT          409 a          714 c          648 g          406 t
ORIGIN      
        1 aaggcggccg ctggtgcgat tcggattacg gccacgcgca ggtcggcgta accgccgctg
       61 cgtgctcgga taagatccgc atcgtccggc aataaagacg tttgtcacgt cacagtgact
      121 tccattctgc tgtcgtcgca gcgcgggtgt tgcgcggtta tcgaatcttg ctgaaatcgc
      181 cgtgtcggcc gaggccgtcc ttgaagcggc ttgcgcccgc cacgccgtcc tcgatcagcg
      241 cttggcgccc attgtaccat tcctggatga gcgcctcgcg cacggtcagc ccgtgaccct
      301 tgatcgcgga acgtcgatcg gctcgcacgc aaacttgcgg aaaccgggcg atctcgtgcg
      361 ccaattcctc agcccttttg cgcgcaccgc ctttgggcgt gacgtattcg cataacccga
      421 tattcaggca gtcttcagcg ggcacctttc ggccggtcag aatgatctcg agggcgcgac
      481 cctgcccgac gattcggggc agtcgcaccg ttcctccgtc gatcagcggc acgccccacc
      541 gccgacagta gacgccaaaa taggattgct ccgccatgac ccggaaatcg caccacagtc
      601 cgagttccat gccgcccgca acggcaggcc cttcgattgc ggcaataacg ggtttgtcga
      661 gttcgagtcg ggttggcccc agcggcccgc gcggaatctc cccgccattg ccccgcggtc
      721 gcgcggtcgg gatatcgagc tcgccaagcg gatagtcggc gttcaacgtg ctgacgtatt
      781 tcaaatccca gccggcgcaa aatgcgccgc ccgcgccatg caggaccgca acggaggcat
      841 tcttgtctgc gtcgaattcg agaaaagctg ccgtgagcgc gtcggcgctt ttcgggtcca
      901 tcgcgttgcg ggcctcgggc cgatcatgga tcactgtcca caccgatccg tctttttcga
      961 tcctgacagt catgaagaca tcctccttgt gcggcgtcgt cgatacaacg aaccggcaaa
     1021 ttccgagcat gccggttcga atcggcatcg acgccttcgt acggcaactc aagccgcgct
     1081 ttgagcgatg gttgcgcgaa ccagctccgc gagacccgcg cgcgtgtccg ccggcttcca
     1141 gccggcctgc acgaatttgg cgggatccgc gacaagtgtc cctccgagac gctgccattc
     1201 ttcggcgcgg ccggctctcc tggccgcaag accgatgagc gaaggcggaa caggcagcaa
     1261 tcccgcccgc cgtccctcgc cggcacgcaa ggcggcgatg atctcggcca atgtcagcgg
     1321 cgcccgatcc gccacaatat atgtctgacc cttcgccgcg ggcgacgcca cgacaagatg
     1381 aacggcatcg atgagactgc gacgtgacag cagcgaccgg cggttacgac acagccccag
     1441 cggcagcggc cagggtttcc gcgcgagctc catcaagcgc gcgaaattgc ccttgacccc
     1501 ggggccatag atgaggaccg gccgcagaat cgtgaatggc accccggcgc tccgaacggc
     1561 ttcttccgct gcaagttttg agcgtccata agcgtccgtt ggccggggcg aatcggtttc
     1621 gcgcagggct tcaatggatg ccggtccgct ttgcgcgcgg atcgacgaca tgaaaatgag
     1681 atgcttgatg ccgtgcgccc gcgcggccgt tgccagttcg gcggtggcga gacggttcac
     1741 ccggtcatag gcttgctcgg caatctgtga ttctgcgtgc gcaataccgg ctaggtgaat
     1801 cacggtctca acatccctga gcagcggcct ccattcaaac ggacgcgtca gatcggcgac
     1861 ggcaacaacc tcgaccgacc gcggaaaaat atccgccggc tgccgcatcg cggcccgcac
     1921 cacatgtccg gcgttggcaa gttcgtcgac cagggctcgt ccgacaaagc ccgatgcgcc
     1981 cgtcacaagt atgcgcgcca cgatgtcccc cggggcgaaa cagcgacgac agatccacct
     2041 tagatacgtc aagagtccgg cgacgccaat cgcattgggt tcgttttgcc aaaatttgag
     2101 ttcgtgctga caaagtcaga aaactgggtt cgttttgcca aaatcagttt gggagatcct
     2161 aggattattg ccccgac
//
LOCUS       DATDHO010000374         1910 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_166707, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000374 DATDHO010000000
VERSION     DATDHO010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1910
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166707"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1023
                     /locus_tag="VIY07_07260"
     CDS             <1..1023
                     /locus_tag="VIY07_07260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6381590.1"
                     /translation="SRPGADAAKFRKKFMALVRYFAALVFLASLVAITAPVTNADEYP
                     SRPVKVIVPFGAGGPTDVYTRAIAEELRKSLHQPFIMENRPGAGTTIGTDTVAKSPPD
                     GYTLLMVSGTQAVNETLYVHKPYQLMRDLVPIAPLIDTDLVLVVHPSVPAKNLGELLA
                     LARAKPGTLNYGSSGPGSNYHMAGELLKNLAGIDIVHVPYKGSTGARNDILSGQVQML
                     FDSVPTMTPMIKAGLVRALGTSGKTRSPTLPDVPTIAEAGVAGFNATLWVGFMAPAAT
                     PQPIVDKLNREITKILARPDIKEAWEKTGATPIVMTQPEFKAFMDAQVAKWANVIKTN
                     QIPPIN"
     gene            1044..>1910
                     /locus_tag="VIY07_07265"
     CDS             1044..>1910
                     /locus_tag="VIY07_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6381591.1"
                     /translation="MNEMSKPAPAIKSEDHWTTRDGGVKLFLFEKCAGDPAKSIGTIL
                     FVHGSSMASQPTFDLQVPGRPDSSAMDHFARRGYDCWCVDMEGYGRSTKDRDNNAPIS
                     QGADDCHAAALYIQKLRGKRPFLVYGISSGALRAAMFAERHPEMVARLALDAMVWTGE
                     GSPTLEQRRKKLAEFTAKNRRPIDKAFIHSVFDRDHPDTAERRVIDAFADAVTALDDS
                     VPTGTYVDMCSKLPVVNPEKITVPTLIMRGQHDGIASLDDLLKFFEKLPNPDKQFTIM
                     PGISHASFQQKNY"
BASE COUNT          420 a          590 c          547 g          353 t
ORIGIN      
        1 agtcgccccg gggcagacgc ggccaaattc aggaaaaaat tcatggctct tgtgcgatat
       61 ttcgcagccc tggtcttcct cgcgagtttg gtcgcaatca ccgcgccagt gacgaatgcg
      121 gacgagtacc cctcacgccc tgtgaaggtc attgtcccgt ttggcgcggg aggaccaacc
      181 gacgtctata cgcgcgccat cgccgaagag ttgcgcaaat ccctgcatca accattcatc
      241 atggaaaacc ggccgggcgc cggcactacg atcggcaccg acacggtcgc caagtcgccg
      301 cctgacggct acacgctgct gatggtctcc ggcacgcagg ccgtcaacga aactttgtac
      361 gtccacaagc cctaccagct catgcgtgac ctggtgccga tcgcaccgct gatcgacacc
      421 gacctggtcc tcgtggtgca tccatcggtg cctgccaaaa acctgggcga gctccttgcg
      481 ctggcccgcg caaagcccgg cacgctcaac tatggctcgt ccggtcccgg ctcgaactat
      541 cacatggccg gtgagctgct gaagaatctt gccggtatcg acattgtcca tgtgccctac
      601 aaaggctcga cgggggcccg caatgacatc ctgagcggcc aggtccagat gctgttcgac
      661 tccgtgccga caatgacgcc gatgatcaag gccggattgg tgcgcgcgct gggcaccagc
      721 ggcaagacgc gatcaccgac gttgccggac gtgccgacaa ttgcggaagc cggcgttgcg
      781 ggctttaacg caacgttatg ggttggcttc atggcgccgg ccgcgacccc gcaaccgatt
      841 gtcgacaaac tcaatcgtga gatcacaaaa attctggcgc gtcccgacat caaagaggcc
      901 tgggaaaaaa ccggcgcgac gccgatcgtg atgacgcagc cggaattcaa agccttcatg
      961 gacgcccagg ttgcgaaatg ggcgaatgtc atcaagacca atcagattcc accgatcaat
     1021 tgacgggtat tgcgagcaaa gccatgaatg aaatgagcaa gcctgccccc gccatcaaaa
     1081 gcgaggacca ttggacgacc agggacggcg gagtgaagtt gttcctgttc gaaaaatgcg
     1141 ccggtgatcc tgccaaaagc atcggcacaa ttctctttgt gcacggctcg tcgatggctt
     1201 cacagccgac gtttgatttg caggtgcccg ggcgtccgga ttcatcggca atggatcact
     1261 tcgcgcgacg cggctacgac tgctggtgcg tcgacatgga aggctatggc cgctcgacca
     1321 aggatcgcga caacaacgca ccaatctcgc agggcgcgga cgactgtcac gcggctgccc
     1381 tctatatcca gaagctgcgc ggaaaacgtc cgtttcttgt ttacggaata tcttcaggcg
     1441 cgctgcgcgc cgcgatgttt gccgaacggc atcccgaaat ggtcgcaagg cttgcgctcg
     1501 atgccatggt gtggaccggc gaaggctcgc cgacgctcga gcagcgacga aaaaagctcg
     1561 cggagttcac cgccaaaaac cgccggccga tcgacaaggc tttcatccat tcggtattcg
     1621 atcgcgacca tcccgacacg gccgaacgcc gggtgatcga tgcattcgcc gacgccgtca
     1681 ccgcgctcga cgattcagtt ccgacgggaa cgtatgtcga catgtgctcg aagttgcccg
     1741 tcgtgaaccc tgaaaagatc acggtgccga cgcttatcat gcgcgggcag cacgatggca
     1801 ttgcgtcgct ggacgacttg ttgaagtttt tcgagaaact gccgaacccc gacaagcagt
     1861 tcaccatcat gccgggcatt tcacacgcga gtttccagca gaagaactac
//
LOCUS       DATDHO010000375         2563 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_216502, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000375 DATDHO010000000
VERSION     DATDHO010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_216502"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..1545)
                     /locus_tag="VIY07_07270"
     CDS             complement(151..1545)
                     /locus_tag="VIY07_07270"
                     /inference="COORDINATES: protein motif:HMM:TIGR01845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HEY6381592.1"
                     /translation="MKRPAFVAVFALIVSGCMVGPDYSRPPVLIPDNYRGVIGAPTAE
                     SFADLPWFEVFRDPVLQDLVREALENNYDLRVAAARVEEARAQIGIARSFLYPQINFN
                     GGGSAQQVSRATDPPESFGANRNFQNWLLGFGLAWEFDVFGRIRREAEAATSIFLATE
                     QGQRGVLITLVADVAQSYFTLRELDLELEIARRTVQVNDETVQFYQTRLEGGVSNRLE
                     LDTAISNRSRTASTIPELERQIAIQENQINLLLGRNPGPIPRGTALTEQYSPPNIPPG
                     LPSALLERRPDIKAAEDLLVSANADIGAAKALFFPNFSLTAALGGASHNLSNIADRRA
                     AIWSVAGGVLQPIFQGWRITSNYEAAKARFEQAVAQYQRSAQNGFREVADALVTIEKL
                     EGVRVELEIGVRALQDATNLARLRYDTGLANYLEILIADQELFNQELALARVRGGQLN
                     AVVQLYRSLGGGWQ"
     gene            complement(1547..>2563)
                     /locus_tag="VIY07_07275"
     CDS             complement(1547..>2563)
                     /locus_tag="VIY07_07275"
                     /inference="COORDINATES: protein motif:HMM:NF013069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6381593.1"
                     /translation="LFTSFDPRYPQVKVDLDREKARKLGVPINEVFQALSASLGGSYV
                     NDFNRFGRLYRVYVQADADYRRKAKDIGDIYVRSERTKSMIPLSTLVTITSESGTEVT
                     NRFNLFRSVEINGVPGRGYTSGQALATLEDVFKQTMPKEMGFAFASLSYQEKVAPPAG
                     PTFVLAIVFVFLLLAAMYESWRLPWAVLLGSPLVALGAFFGVWLMGYDNNVYVQIGNI
                     MLIGLAAKNAILIVEFAKAKHEEGMSLEDAALESARLRFRPILMTAFAFILGVVPLML
                     ASGAGAGAQNVMGTAVFWGMLVATCLGVFLIPGNFAFVEGLGRKRKTAPRVVPVAPSH
                     EVAH"
BASE COUNT          569 a          749 c          743 g          502 t
ORIGIN      
        1 ggcacagccc gccggatcgt cagtgagata ggaccaaccc ttggcatagg cgaaagtgta
       61 gacgccaatc ccaacggcaa tgccgatcac caccccaagc aggatgcctt gaatcgtgcg
      121 cggtgtcatc ttactgttct caccctgcct ttactgccag ccgccgccga gagaacggta
      181 gagttgcacc acggcgttga gctgacctcc gcgtacgcgg gccaatgcca gctcctgatt
      241 gaagagctcc tggtcggcga tcaaaatctc tagatagttt gccagcccgg tgtcgtagcg
      301 cagccgcgct aggttggtag catcctgcaa agccctcacg ccgatttcta gctcgacgcg
      361 cacaccctcg agtttttcaa tagtcacgag cgcatccgcc acttcccgaa atccgttctg
      421 cgccgacctt tgatattgag caaccgcctg ttcgaagcga gcttttgctg cctcgtagtt
      481 ggacgtaata cgccagccct ggaaaatggg ctgcagcacg ccgcccgcaa ctgaccaaat
      541 ggcggcgcgc ctgtcggcta tgttggataa attatggctc gcgccaccga gcgccgcggt
      601 cagcgagaaa ttgggaaaga aaagggcctt ggcggcgcca atgtccgcgt tggccgaaac
      661 caacaagtcc tccgcagctt tgatatcggg acgccgctcg aggagcgccg acggtaagcc
      721 cgggggaatg ttgggcggag agtactgttc ggtcagagcc gtgccccgtg gaatagggcc
      781 ggggttgcgc ccgagcagca aattaatttg gttctcttga atagcgatct ggcgctccag
      841 ttcagggatt gtggaggcag tgcgcgagcg gttagagatg gccgtgtcca gttccagccg
      901 gttagagaca cccccctcga gccgcgtctg ataaaattgc acggtctcgt cgttaacctg
      961 cacggtgcgc cgggctattt cgagctctaa atccagctcc cgcagggtga aataggactg
     1021 ggctacgtca gccactagag taataagaac acctcgctgg ccctgttccg tagcgaggaa
     1081 tattgaggtc gcggcttccg cttcgcgccg gattctgccg aagacatcga actcccatgc
     1141 caggccgaat cctaagagcc agttttgaaa attacggttg gcgccgaatg actccggcgg
     1201 atcagtggct cgtgaaacct gttgcgcact gcctccgcca ttgaaattga tctgcggata
     1261 caggaaagac cgcgctatgc cgatctgcgc ccgcgcctcc tctaccctag ctgcagcaac
     1321 acgcagatca tagttatttt ctagcgcttc ccggacaagg tcttgcagta ccggatcgcg
     1381 aaaaacttcg aaccagggaa gatcggcaaa cgattctgcg gtaggtgctc caatgacccc
     1441 gcgataatta tccggaatta agactggcgg ccggctgtag tcggggccca ccatgcagcc
     1501 ggacacgata agcgcaaaga cggcaacgaa agcgggtcgt ttcatctcag tgcgccacct
     1561 cgtgtgatgg cgcgacagga accacccttg gggccgtctt ccgttttctc ccaaggccct
     1621 cgacgaacgc aaagttgcca ggaatgagga acacgccgag acaggtagcg accagcattc
     1681 cccagaagac ggcggtgccc atgacgttct gcgcaccggc gcccgctccg cttgcgagca
     1741 tgaggggtac cacgccgagg atgaaggcga aggcggtcat gagaatcggc cgaaaacgca
     1801 ggcgggctga ctccagcgcg gcatcctcaa gagacatacc ttcttcgtgt tttgccttgg
     1861 caaattctac gatcaggatc gcgttcttcg ccgcgaggcc aatgagcatg atgttgccga
     1921 tttgaacgta aacattgttg tcgtaaccca tcagccaaac gccaaagaat gctccgaggg
     1981 ccaccagcgg agagccgagc aaaaccgccc acggcagtcg ccaactctcg tacatagcgg
     2041 cgagcaatag aaaaacgaac acgatggcca ggacaaacgt cggtcccgcg ggtggcgcga
     2101 ctttctcctg gtacgacaag ctggcaaagg caaaacccat ttccttcggc atcgtctgtt
     2161 tgaagacgtc ctccagagtg gccaaagcct ggccggaagt atagccgcgc ccgggcacgc
     2221 cgttgatttc cacggagcgg aacaaattga agcggttggt gacctcggtg ccgctttcag
     2281 aagtgatggt taccaacgta gagagcggga tcatgctctt ggtcctttcg ctgcgcacgt
     2341 agatgtcacc gatgtccttg gccttgcggc ggtagtcggc atccgcctgg acatagacgc
     2401 gatagagccg gccaaagcga ttgaagtcgt tcacgtagct gccgcctaga ctggcggaca
     2461 gcgcttgaaa cacctcgttg atcggcactc cgagtttgcg cgccttttct cggtcgaggt
     2521 ccaccttgac ttgaggatag cggggatcaa acgaagtgaa gag
//
LOCUS       DATDHO010000376         2371 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_65010, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000376 DATDHO010000000
VERSION     DATDHO010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2371
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_65010"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..777)
                     /locus_tag="VIY07_07280"
     CDS             complement(<1..777)
                     /locus_tag="VIY07_07280"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381594.1"
                     /translation="MRKTFGILVALTASLMLPSAALAQTKIVIGIPTSPPNIVHMPPI
                     VAKELGLYKKAGIDAEIVSLGDGTKVFRALLAENIDFGLTPGAPTIIGRSNGATVKAL
                     TANLPKFEASMIVRANVKTMQDLKGKRIGIQEPGGFADILSRAILRVAKIDPKEVNFV
                     SIASEDVPALVADQVDTAILHVEQEMLAKSKVPDLHAIGRMWELQPKTLYTFLSVNEK
                     TIRDKPALVQAVVSANIEATRIIYTEKAKIMPILVKQTGYP"
     gene            968..1684
                     /locus_tag="VIY07_07285"
     CDS             968..1684
                     /locus_tag="VIY07_07285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF938 domain-containing protein"
                     /protein_id="HEY6381595.1"
                     /translation="MVKFIVEYGKGREPPAADARLDGPAYHRNHEPIWSAISGFLSAQ
                     SGDVLEIGSGTGQHATEFARRAPQLNWWPSDIYDSHLKSIAARRTHSGLANLRAPQRI
                     DLSDPHWTWTGDSGKGGALTAMLCINVLHISPWPISQNLIAGAGRLLKDDGCLFVYGP
                     FKRGGRHTAPSNAQFDATLRAENRQWGVRDVDDLNVLAQDAGLTAAEIVPMPANNLVL
                     VFVRTLRQNSPNNPEESHGN"
     gene            1674..>2371
                     /locus_tag="VIY07_07290"
     CDS             1674..>2371
                     /locus_tag="VIY07_07290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6381596.1"
                     /translation="MATEPIHDIAHLGHVELLTPKFEESRKFFIDVMGMTQSGAKGDS
                     VYLRGWDDYERYSLKLTASNSSGLGHAAFRTRSPQALERRATALKGSGFDLGWSDGDL
                     GHGKTFVFTDPDGHKFEIYYETEWYEAPPELKPALKNQAQRFPARGINVRRIDHFNGL
                     AVDIKANREFFQNYLGFKLTEQIVLDDGSEAGMWMTATNKSYDFAYTRDHTGTKGRLH
                     HVTFALDAREDVLRA"
BASE COUNT          482 a          731 c          677 g          481 t
ORIGIN      
        1 cggatagccg gtttgcttca ccaggatcgg catgatcttc gccttttccg tgtagatgat
       61 ccgggtcgcc tcgatattgg ccgagacgac cgcctgcacg agcgcgggct tgtccctgat
      121 ggtcttttcg ttgaccgaca ggaaagtata cagcgtcttc ggttgcaact cccacatgcg
      181 gccgatcgcg tgcagatccg gtaccttgct cttggcaagc atctcctgct cgacgtgcag
      241 gatcgcggta tcgacctggt cggcgacgag cgccggaacg tcttcgctcg cgatactgac
      301 gaagttgacc tccttgggat ctatcttcgc cacccgcaat atggcgcggc tcaggatgtc
      361 ggcaaaacct ccgggctcct ggatcccgat gcgcttgccc ttgagatcct gcatggtctt
      421 gacgttggcg cgcacgatca tcgaggcttc gaacttcggc agattggcgg tcaacgcttt
      481 cacggttgcg ccgtttgatc ggccgatgat ggtcggcgcg cccggcgtca ggccgaaatc
      541 gatgttttcc gccagcagcg cgcggaaaac cttggtgcca tcgccgagcg acacgatctc
      601 cgcatcaatt ccggcctttt tgtagaggcc cagctctttc gcaacgatcg gcggcatgtg
      661 aacgatgtta ggcggcgagg tcggtatgcc gatcacgatc ttggtctgcg cgagagccgc
      721 actcggcagc atcaagctgg ccgtcagcgc gaccaaaatc ccaaaagtct tgcgcatgtt
      781 gtcctcccag gtttttgcgc tcgcgcggta tcccgcgtcg tccggcaaca gaacgccgga
      841 aaacccgatt ttgcccgatc gccctggtaa aaacaacgaa tgctcaaagt agttcatccc
      901 ggggcgcggg cgcctttgac cgcggcgacc ggtcatgcct aattgcaatg cttttgggtc
      961 ctcaaccatg gtcaaattta tcgtcgagta cggcaagggc cgcgagccgc ccgccgccga
     1021 cgcccggctg gacggcccgg cttaccaccg caatcacgag ccgatctggt cggcaatttc
     1081 gggttttctc tcggcgcaat ccggcgatgt gctcgagatc ggcagtggga ccggtcagca
     1141 tgcgaccgaa tttgcccgac gcgcgccgca attgaactgg tggccgagtg atatttatga
     1201 ctctcacttg aagagcatcg ccgccaggcg aacccattca ggacttgcaa atttgcgcgc
     1261 gccgcagcga atcgatcttt ccgatccaca ctggacatgg acgggagaca gcggcaaagg
     1321 cggcgcgctc accgccatgc tttgcataaa cgtgctgcac atttcgccgt ggccgatatc
     1381 gcaaaatctg atagctggtg caggccggct gttgaaagac gacggctgtc tttttgtcta
     1441 cggaccattc aagcgtggcg gcaggcacac cgcgccgagc aatgcgcaat tcgatgccac
     1501 gctgcgtgcc gaaaatcggc aatggggcgt gcgcgatgtt gacgacctca atgtgttggc
     1561 gcaagacgcc ggcttaaccg cggccgaaat agtcccaatg cccgccaaca accttgtact
     1621 ggttttcgtt cgcacgcttc ggcagaattc accaaacaac ccagaagaaa gccatggcaa
     1681 ctgaaccaat tcacgacatt gctcatctcg gccatgtcga acttctgact cccaaattcg
     1741 aggaaagccg caagttcttc atcgacgtga tgggcatgac ccagagcggc gcgaaaggtg
     1801 acagcgtcta cctgcgagga tgggacgact atgagcgtta ttcgctcaag ctgacggctt
     1861 cgaactcatc cggtctcggc catgccgcct tccgaacgcg ctcgccgcag gcgctggaac
     1921 ggcgtgccac cgcgttgaag ggttccggct tcgacctcgg ctggagcgac ggcgatcttg
     1981 gtcacggcaa gacatttgta ttcaccgacc ccgacggcca taaattcgag atctactacg
     2041 aaaccgagtg gtacgaggcg ccgcccgaac tcaagcccgc tctcaagaat caggcgcagc
     2101 gttttcccgc gcgcggcatc aacgttcgca ggatcgacca tttcaacggg cttgcggtcg
     2161 acatcaaggc caaccgcgaa ttcttccaga actatctcgg cttcaagctg accgagcaga
     2221 ttgtgctcga cgacggcagc gaagccggca tgtggatgac agcgaccaac aagagctacg
     2281 attttgccta cacgcgcgac cacaccggca ccaaaggccg tctgcaccat gtcaccttcg
     2341 cgctcgatgc gcgcgaggac gtgcttcgtg c
//
LOCUS       DATDHO010000377         3728 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_461348, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000377 DATDHO010000000
VERSION     DATDHO010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3728)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3728)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3728
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461348"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VIY07_07295"
     CDS             <1..564
                     /locus_tag="VIY07_07295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381597.1"
                     /translation="EFVTAEAAQARWRALAAFVEKNGHFLVTNGPYRLAQWNSESVVL
                     QAVREVTYPLGFGTFDRFVHPPRAVIESLAHEDGTIAVRANAEMVLRTGRDYKLMKEP
                     LLRTTMRGTFGLLVVSRYLLIDPDGKVRNLDKMHWEDDGRFTIKLPERLPPGEYTVNL
                     AVFLDGNSVAPSAKSLRLRVGGTGSPN"
     gene            623..1498
                     /locus_tag="VIY07_07300"
     CDS             623..1498
                     /locus_tag="VIY07_07300"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381598.1"
                     /translation="MDILIIQILNSIFYACILFLIAAGLSLIYGVMRIVNLAHGSLYA
                     LGAYVTAWAIGTFAAGAPLWVLFLLLPVGAIVVAAVGALIEPTLLRPLYKRPEEYQLL
                     ITFALLLILEDVMHFLFGGVPLTAGAVIDSMGTMRVMNLRYPVYNLVVIAIGIASAVF
                     LWAVIYRTRFGVILRATSQNMRMASALGLNVKWVYVQAFALGCFMAGLGGAVVVPAQA
                     AVLGMGVEALILAFVVVVIGGLGSLEGALIGALIVSFVRTAGIQFFPEIELAVLYLIA
                     ALVLLIKPTGLFGRA"
     gene            1501..2505
                     /locus_tag="VIY07_07305"
     CDS             1501..2505
                     /locus_tag="VIY07_07305"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381599.1"
                     /translation="MQDNAARTGPSTRLIVACAIPILIVLLALPRFLDVYQTQLFTYG
                     LIYAIAALGFNLLLGYTGLLSFGHSAYFGLGAYSAAFLVKYFGVGSIEIYILVGLLIT
                     GLISAAFGYVCVRHTRIFFGILTLALSQVLWTLAYKFFWVTGGTDGLRVAFANLTLLG
                     GLIEFKGRNAYQSFVQSYYYYVLFLFCVCTILMWVIVHSPFGKALQAIRDNETRAQFL
                     GIPIRRYRWIAFLLSGSFTGLAGILWVPLNGLVTPDILYWPFSGEIVFMTVLGGFRTF
                     TGPIIGAIVFNYLKVYAVASTAYWQFMLGAVLVVLVLALPTGIVGTLARQFGKLRKRG
                     "
     gene            2507..3280
                     /locus_tag="VIY07_07310"
     CDS             2507..3280
                     /locus_tag="VIY07_07310"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381600.1"
                     /translation="MNLLETINLKKYFGDTRAVDNVNLSIAEREFVSLVGPNGAGKTS
                     LVNVISALLPSDSGKILFKGDDITQATVTDRVRAGIARSFQIVNLFDDLTAFDNVTLA
                     IFSREGKTTNLMALAHLDHAVSTEADNVLRNFNLSDKRNERARDLSQGERKLLDVALA
                     YALRPKLLFLDEPTSGVSTRDKGQIMDTIASVVRGEGITAVIVEHDMDVVFKYSDRIV
                     VMQQGAILAQGTPDEIRKNDQVAMVLLGTSGPDAFTRKD"
     gene            3286..>3728
                     /locus_tag="VIY07_07315"
     CDS             3286..>3728
                     /locus_tag="VIY07_07315"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6381601.1"
                     /translation="MLELKAIDTYRGPAHILYGVSLHVEKQEVVCLVGRNGAGKTTTI
                     ESIMGFLPLRSGQILFADEDLTKLPPHERAKRGIGFSPEDCGVFPELTVSENLMISRW
                     LGDEVARKRDGAERPNPEAQAFGIFPEVQALLQREGLHLSGGQRK"
BASE COUNT          693 a         1057 c         1083 g          895 t
ORIGIN      
        1 gaattcgtga ccgccgaagc tgcgcaggca cgctggcgtg cgcttgccgc ttttgtcgaa
       61 aagaacggac attttctcgt gaccaacggg ccgtatcggc tggcgcaatg gaactccgag
      121 tcggtcgtgc tgcaggcagt ccgcgaggtc acttatccac tcggcttcgg caccttcgac
      181 cgcttcgtcc acccgccgcg cgcagtaatc gagtccctcg cgcatgagga tggcacgatc
      241 gccgttcgcg ccaacgcgga aatggttttg cggacggggc gtgattacaa gttgatgaaa
      301 gaacccctgc tacgaactac catgcgggga acctttgggc tgctggtggt gtcgcgttat
      361 cttctgatcg atcccgatgg caaagtgcgc aatctcgaca agatgcattg ggaggacgac
      421 ggacgcttca cgattaaact ccccgagcgg ctgccgccag gtgagtacac ggtgaatctc
      481 gcggtcttcc tcgacggcaa ctccgtggct ccctcggcta agtcgttgcg cttgcgcgtt
      541 ggcggaacag gatcgccgaa ttagtggaaa tgtgaatgtt ggggcacatg cacgcgagac
      601 agtaaaattc ggcggggcaa atatggatat cctgatcatt caaattctga attctatttt
      661 ctacgcctgt attctgttcc tcattgccgc cgggctcagt ctcatctacg gcgtcatgcg
      721 gatcgtcaac cttgcgcatg gcagcctcta cgcgctcggc gcttatgtca cagcttgggc
      781 catcggcacg ttcgcggcgg gagcccctct ttgggtgctg ttcctgttgc tacctgtagg
      841 cgcaatcgtg gtcgccgccg tcggcgccct gatcgagccg acacttctgc ggccgcttta
      901 taagcgtccc gaggagtatc agcttttgat cactttcgcg ctgttgctga tcctcgagga
      961 cgtcatgcac ttcctgttcg gaggcgtgcc gctgacagcg ggtgccgtca tcgacagcat
     1021 gggcaccatg cgagtcatga acctgcggta tccggtctat aatctcgtgg tcattgccat
     1081 cggcatcgcg tccgccgttt tcctgtgggc cgtcatttat cgcacaaggt ttggcgtcat
     1141 cctcagggct acatcgcaga acatgcgcat ggcgtccgca ctaggtctga acgtcaagtg
     1201 ggtttacgtc caggcattcg ctcttggctg ctttatggct ggtctcggag gcgcggtggt
     1261 cgtacctgcg caggcagccg tgcttggtat gggcgtcgaa gccctgatcc ttgcgttcgt
     1321 cgtcgtcgtt ataggtggcc tcggcagcct cgaaggcgct ttgattggag cgcttatcgt
     1381 gagcttcgtg cgcacagccg gcatccagtt ctttcccgaa atcgaactgg cggttctcta
     1441 tctgattgca gctcttgtcc tgctgataaa gcccaccggt ctgttcggga gggcgtgacg
     1501 atgcaggaca acgctgcacg cactggacca tcgactcggt tgatcgttgc ttgcgcgatt
     1561 ccgattctca ttgtgctttt ggccttgccg agatttctcg atgtctatca gacgcagctg
     1621 ttcacctacg gactgatcta tgcgatcgca gcgctcggat tcaatttgct gctcggctac
     1681 acgggcctgc tctccttcgg ccattcggca tatttcggtc ttggcgctta ctccgccgcc
     1741 ttcctggtca aatatttcgg cgttggctcg atagagatct acattctcgt tgggctcctc
     1801 atcaccggtc tgatttcggc ggcgtttggc tatgtctgtg tccgccacac ccgcatattc
     1861 ttcggcatcc tgacgttggc actgtcgcag gtgctgtgga cgctggccta caaattcttc
     1921 tgggtgaccg gtggaaccga cggcctgcgc gtggccttcg ccaatttgac actgcttggt
     1981 ggcctgatcg aattcaaggg ccgcaatgct taccagtcgt tcgtgcaatc ctactattat
     2041 tacgtgctgt tcctattctg cgtctgcacg attctcatgt gggtgatcgt gcactcgcca
     2101 ttcggcaagg cgttacaagc gattcgcgac aacgagaccc gcgcgcagtt cctgggcatt
     2161 cccattcgac gttatcgctg gatcgcattt ctgctgtcgg gcagcttcac cggtcttgcc
     2221 ggtatcctgt gggtgccgct gaatggcttg gtcacgcccg atattttgta ttggccgttc
     2281 tccggcgaga ttgtgttcat gacggtgctc ggcggctttc gcaccttcac cgggccgatc
     2341 atcggcgcga tagtgttcaa ttatcttaag gtttacgccg tcgccagtac cgcctattgg
     2401 caattcatgc ttggtgcggt gcttgtggtg ctggtactgg cgctgccgac aggtatcgtc
     2461 ggaacgcttg cgcgccaatt cggcaagctc agaaagaggg ggtgacatga atctcctcga
     2521 aaccatcaat ctgaagaaat atttcggcga cacgcgcgcc gtcgataacg ttaatctgag
     2581 catcgccgaa cgtgaattcg tctcgttggt tggccccaac ggcgccggca agacctcgct
     2641 ggtcaatgtg atcagtgcgc tgcttccatc cgactcggga aagatcctgt tcaagggcga
     2701 cgacatcact caggctactg tgacggatcg cgtcagggca ggaatcgcgc gaagcttcca
     2761 gattgtaaac ctgttcgatg acctcactgc gttcgataac gtaacgctgg ctatcttttc
     2821 gcgtgagggc aagaccacca atctaatggc tctcgcccac ctcgatcacg cggtgagcac
     2881 cgaagccgat aatgtgctgc gcaacttcaa cctttcggac aaacgcaacg agcgcgcgcg
     2941 cgatctttcg cagggtgagc gaaagctgct tgatgtggcg ctggcctacg cgctgaggcc
     3001 gaaactgctg ttcctcgatg aaccgacgag cggcgtcagc acgcgcgaca aaggtcaaat
     3061 tatggatacg atagcctccg tggtacgggg cgaaggcatc acggccgtga ttgttgagca
     3121 cgatatggac gtcgtgttca aatattcaga tcgcatcgta gttatgcaac agggtgcaat
     3181 tctcgcccag ggcacgcccg atgagattag gaaaaatgat caggtcgcca tggtcctgct
     3241 cggcacttcc gggccggatg catttactcg aaaggattga tcgacgtgct tgagctcaag
     3301 gcgatcgata cctatcgcgg gccagcccac attctctacg gcgtgtccct gcacgtcgaa
     3361 aagcaggaag tcgtgtgcct ggtcggacga aatggcgccg gcaagaccac cacgatcgaa
     3421 agcatcatgg gatttctgcc actgcgttcc ggccagatcc tttttgccga cgaagatctg
     3481 acaaaacttc cgccgcacga acgggccaaa cgcggcatcg gcttttcgcc ggaagactgt
     3541 ggggtttttc cggaactgac ggtaagcgag aacttgatga tcagccgctg gctgggtgac
     3601 gaagtcgccc ggaaacggga cggcgcggag cggccgaatc cggaagcgca ggcttttggc
     3661 atttttcccg aagtccaggc tctactgcag cgggaggggc tgcatctcag cggcggtcag
     3721 cgcaagat
//
LOCUS       DATDHO010000378         2606 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_166847, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000378 DATDHO010000000
VERSION     DATDHO010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2606
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_166847"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..720
                     /locus_tag="VIY07_07320"
     CDS             <1..720
                     /locus_tag="VIY07_07320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEY6381602.1"
                     /translation="FNTFMSAMAREAAAAGVSRSVIDSAFAGVTPDPAVLAFDRRQRG
                     TFRKSFEEYASTRVVPVRINRAKRLMQTHASLLSRVERQFGVPRELLMAIWTLESDNG
                     TGDMGKLPVVRTIATLAHDCRRTELFQNELISALKIVQRGDLPLRDLVGAYAGEIGQT
                     QFLPSSYIKYGVDYDGNGHIDLRHSVPDVLASTANLLKVNGWRAGAPFGEGTDNFQVM
                     REWNRSEVYRKTMVLFSERLK"
     gene            1068..>2606
                     /locus_tag="VIY07_07325"
     CDS             1068..>2606
                     /locus_tag="VIY07_07325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003586266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase family protein"
                     /protein_id="HEY6381603.1"
                     /translation="MIKDLWYKNSIIYCLSVATYMDANADGIGDFQGLMRRLDYLHGI
                     GITAIWLMPFQKSPGKDDGYDISDYYAVNPAFGSIGDFVEFTHGAKQRGIRVLIDLVV
                     NHTSNEHPWFQEARRDPDSKFRNWYVWSKKRPAHAEKGMVFPGVQKSTWTYDSVAKQW
                     YFHRFYDFQPDLNTSNPEVQAEILKIMGFWIQLGVSGFRMDAVPFIIGTKGADVEKPR
                     EQYNMLRSLREFLQWRVGDSIILAEANVLPHTDMDYFGEDGDRMHMMFNFQVNQNLFY
                     AIAASDTRPLARALDRTRERPASAQWGIFLRNHDELDLGRLTEKQRQRVFEAFGPNPE
                     DQLYDRGIRRRLAPMLGGDKRRLQLAYSLMFTLPGTPVLRYGDELAMGDDLSLPERTC
                     CRTPMQWSTEPNGGFTKSNKPVVPVISGGPYGFEHVNAADQRRDPNSMLNWTERIIRM
                     RKEVPEIGWGDFEVLKTGDWAVFGIRYDWRNNSVLFLHNLAHEPREVEFSVGVKGDTG
                     KLLVN"
BASE COUNT          535 a          798 c          780 g          493 t
ORIGIN      
        1 ttcaacacct tcatgtccgc catggcgcgc gaagccgcgg ccgccggcgt ctcgcgcagc
       61 gtgatcgaca gcgcgtttgc cggcgtcacg cccgaccccg cggtgctggc cttcgaccgg
      121 cgccagcgcg gcacgttccg caagagcttc gaggaatacg caagcacgcg cgtcgtcccg
      181 gtccgcatca accgcgccaa gcggctgatg cagacccatg cctcgctgct ctcgcgcgtc
      241 gagcggcaat tcggcgtgcc gcgggaattg ctgatggcga tctggacgct cgaaagcgac
      301 aacggcaccg gcgacatggg caagctgccg gtggtccgca ccatcgcgac gctggcgcat
      361 gactgccgcc gcaccgagct gttccagaac gaactgatct ccgcgctcaa aatcgtccag
      421 cgcggagacc tgccgttgcg cgacctcgtc ggcgcctatg ccggcgagat cggccagacg
      481 cagttcctgc cgtcgtccta catcaagtac ggcgtcgact acgacggcaa cggtcatatc
      541 gatctgcgcc acagtgtgcc ggacgtgctc gcgtccaccg caaaccttct gaaggtgaac
      601 ggctggcgcg ccggcgcgcc gttcggcgaa ggcacagaca atttccaggt gatgcgcgag
      661 tggaacagat ccgaggtcta tcgcaagacg atggtgttgt tctcggagcg gctgaagtag
      721 tagctcacga accttccaag caacgaatat catggtgcag tcatgcccgg ctaaatgccg
      781 ggcatccacg tcttcctacc cctgctgcat agacgtggat ggccgggaca agcccggcca
      841 tgacgttgag aagccacgcg ggaacgaacg gggacgagac atcgcatccg ttcgtccccg
      901 cgaaagcggg gacccatttc caggcacaaa ctggattccc gcttacgcgg gaatgaacgg
      961 gggggacgag acaccgggca tccacgtctt ttgcgcaccg cggagggaac tctttgagtg
     1021 cccccgcttt aacgcgtggc ggctttgcga agtaaccgtg cgcggcgatg atcaaggacc
     1081 tctggtacaa gaactcaatc atctattgcc tgtcggtcgc cacttacatg gacgccaacg
     1141 ccgacggcat aggtgatttc cagggcctca tgcggcgcct tgactatctg catggtatcg
     1201 gcatcacggc gatctggctg atgcctttcc agaaatcgcc aggcaaggat gacggctacg
     1261 acatctccga ttactacgct gtcaatccgg cttttggatc tatcggcgat ttcgtcgaat
     1321 tcactcacgg cgccaagcag cgcggcattc gcgtactcat cgatcttgtc gtcaaccaca
     1381 cgtccaatga acatccgtgg tttcaggagg cgcgccgcga cccggattcg aaatttcgca
     1441 attggtacgt ctggtcaaaa aaacgtccgg cccacgccga gaagggcatg gtgtttcccg
     1501 gcgtacagaa atccacctgg acctatgact cggtggcgaa gcaatggtat ttccatcgct
     1561 tctacgattt ccagccagac ctcaacacgt cgaatccgga agtccaggcc gaaatactga
     1621 aaatcatggg cttctggatc cagcttgggg tttcgggttt ccgcatggat gccgtgccct
     1681 tcattatcgg caccaagggt gcggacgtgg agaagccgcg cgagcagtac aatatgcttc
     1741 gctcgttgcg cgaattcctg cagtggcgtg tcggcgactc catcattctc gccgaagcaa
     1801 acgtattgcc gcacaccgac atggactatt tcggcgagga cggcgaccgc atgcacatga
     1861 tgttcaattt tcaggtcaat cagaatctgt tctatgcgat tgcggcgtcc gatacgcggc
     1921 cacttgcaag ggcactcgac aggacaaggg aaaggccagc cagcgcgcag tggggaatct
     1981 tcctgcgcaa tcacgatgag ctcgatctcg gccgtcttac cgagaagcag cggcagcgcg
     2041 tgttcgaggc gttcggaccc aatcccgagg accagcttta cgatcgaggc atccgacggc
     2101 ggctcgcgcc gatgctcgga ggtgacaagc ggcgcctgca gcttgcctac agcttgatgt
     2161 tcacgctccc gggcacgccc gtcctgcgct atggcgacga actcgcaatg ggggacgatc
     2221 tgtcgttgcc cgagcggaca tgttgccgga caccgatgca atggtcgacc gagccgaatg
     2281 gcggcttcac caagagcaac aaaccggtcg tgcctgtcat cagcggtggt ccctatggct
     2341 tcgagcacgt caacgccgcc gatcagcggc gtgatccaaa ttcgatgctg aactggactg
     2401 agcggattat ccgcatgcgc aaggaagtgc cggaaatcgg atggggcgat ttcgaagtcc
     2461 tgaagaccgg cgactgggcg gtgttcggca tccgctatga ctggcgcaac aactccgtcc
     2521 tgttcctgca caaccttgcg cacgagccgc gggaggtcga gttctctgtg ggggtaaaag
     2581 gcgacaccgg aaagttgctc gtcaac
//
LOCUS       DATDHO010000379         5459 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_461356, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000379 DATDHO010000000
VERSION     DATDHO010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5459
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461356"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(94..1512)
                     /locus_tag="VIY07_07330"
     CDS             complement(94..1512)
                     /locus_tag="VIY07_07330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="circularly permuted type 2 ATP-grasp protein"
                     /protein_id="HEY6381604.1"
                     /translation="MTVAFDEMKGHDGGVRPAYGELSRWLAEVPADVLDYRRREAELI
                     FRRIGITFAVYGEAEAQERLIPFDVIPRIMSGSEWRLLEKGLTQRVSALNAFIKDIYG
                     AREILRAGVVPDDLVFRNPAFRPEMSGQEAPHDIYVHVAGIDIVRVDAETFYVLEDNA
                     RTPSGVSYMLENREIMMRLFPELFSRHRIAPVENYPDELLATLKSVAPLSASRDPNVV
                     LLTPGVFNSAYYEHSFLADKLGVELVEGRDLFVKDEIVYMRTTQGPHRVDVIYRRIDD
                     DFLDPLTFRPDSALGVPGLMSAYKAGNVTLANAVGTGIADDKAVYSFMPAIVKFYLGE
                     EPLLRNVPTWRCRDEEHLAYVLDHLHELVVKEVHGSGGYGMLVGPAASKVAIEQFRAK
                     LKTSPKNFIAQPTLALSTCPTCVEEGVAPRHVDLRPFVLTGLNRVRIVPGGLTRVALK
                     PGSLVVNSSQGGGTKDTWVLDG"
     gene            1753..2517
                     /locus_tag="VIY07_07335"
     CDS             1753..2517
                     /locus_tag="VIY07_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HEY6381605.1"
                     /translation="MNAKPDIVTAAVLVIGDEILSGRTKDRNIGYIADYLTAIGIDLR
                     EVRVVADDAAAIVDAVNALRAKYTYVFTTGGIGPTHDDITADCVAEAFSVPLEFHPDA
                     IAVIKQRLAKTGGELNEARLRMARIPRGAELVANKVSGAPGFWIGNVITMAGIPAVMQ
                     AMLDEVAPKLKTGTKLLSETIRADAKEGDVGTELGAIAKAHPETIIGSYPFIDEKQGP
                     NTNIVVRSRDAEKLAAVKAEVETMLVKVKSQLGIAR"
     gene            2606..3130
                     /gene="gpt"
                     /locus_tag="VIY07_07340"
     CDS             2606..3130
                     /gene="gpt"
                     /locus_tag="VIY07_07340"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000310 - xanthine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HEY6381606.1"
                     /translation="MVNSIAEKKPPRPEKIFPVSWDQFHRDSRALAWRLHDAGPFDAI
                     VCITRGGLVPAAIVARELNVRMIETISVLSYRDYDNQGEVSVIKGIAPEVTGLHAKGK
                     RVLIVDDLVDTGKTARVVRDLLPNAHFATVYAKPMGRPLVVTFITEVSQDTWIYFPWD
                     TGLAFQPPIRPGGD"
     gene            3161..4150
                     /locus_tag="VIY07_07345"
     CDS             3161..4150
                     /locus_tag="VIY07_07345"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6381607.1"
                     /translation="MLTRRHLLATAGAAAWTVAISGAGAQKYASQPIHILVGYAAGGG
                     VDIVARLLQEPMKSALGQPIVIENRTGASAMLATNAVAKAAPDGYTLLMAASGEVAIN
                     HFLFKDKMSYEPTKELVPIAMIGIVPCVVVVADATPIRSPKDLIAYAKANPGKASFSS
                     SGIGNPQQLAGELMNTMAGTQVLHVPYRGSAPAVTDVATGAVTMSFSSLAAALPLIQA
                     GKVRAVAVTSRERMPQLPDVAPLREGAPGLADYELLNWFAMFGTAGTPPEIVERLNGI
                     VNAALKDPPIADKLLPQGIVPKPMKVAEFKAFVDSERTKFGKIVEQANIKLSN"
     gene            4204..4659
                     /locus_tag="VIY07_07350"
     CDS             4204..4659
                     /locus_tag="VIY07_07350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6381608.1"
                     /translation="MNVKPNTKDASPVDDKRSHHVRPQDLPWEKMRFAGCQFKTLLFD
                     PKSGLATVLMRMEPGATLPDHEHVLIEQTYVLEGSLVDREGPDAGLEIKAGEFVWRPA
                     GSRHVAWCPNGGTMIAIFQVPNKFFEQDGKVTDAGGKDWQSAWGHVLSK"
     gene            4721..4807
                     /locus_tag="VIY07_07355"
     tRNA            4721..4807
                     /locus_tag="VIY07_07355"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4754..4756,aa:Leu,seq:taa)
     gene            4924..5274
                     /locus_tag="VIY07_07360"
     CDS             4924..5274
                     /locus_tag="VIY07_07360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003167771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY6381609.1"
                     /translation="MKWQVFFHSEFQAEFEQLKEEVQDELLALGELGPNLGRPNVDTL
                     TGSKFKNMKELRFQLDGVWRFAFAFDPQRNAIVLCGGDKENENSKRFYDQLIETADRR
                     FTAHIASQRKVAKE"
     gene            5279..>5459
                     /locus_tag="VIY07_07365"
     CDS             5279..>5459
                     /locus_tag="VIY07_07365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEY6381610.1"
                     /translation="MKNLNQIIGELSPERRAKIEGRARQLIGEEMALQQLRKARKLTQ
                     KQMARALKIGQDSVSR"
BASE COUNT         1214 a         1549 c         1652 g         1044 t
ORIGIN      
        1 gcacctcagg gtgacggcgg aataacgttt cgtcatcctg aggcgcctgc gtgcagcgcg
       61 ggcctcgaag gatggccgct ctggttgatc gcatcatccg tccagcaccc atgtatcctt
      121 cgtgccgccg ccctggctgg aattgaccac cagtgaaccc ggcttgagcg cgacacgcgt
      181 cagtccgccc ggcacgatcc gcacgcgatt gagtcctgtg agcacgaacg gccgcaagtc
      241 gacatggcgc ggcgcgacgc cttcttccac acatgtcggg cacgtagaga gcgcgagcgt
      301 cggctgggcg atgaaattct tcggcgatgt tttgagcttg gcgcgaaatt gctcgattgc
      361 gactttgctg gcagcagggc cgacaagcat cccgtatccg ccggagccat gcacttcctt
      421 caccaccagc tcgtgcagat gatcgagaac ataggcgaga tgctcttcgt cgcggcagcg
      481 ccaggttggc acatttctca gcagcggttc ttcgccaaga tagaatttca caatcgccgg
      541 catgaaactg taaaccgcct tgtcgtcggc aattccggtg cctacggcat tggcaagcgt
      601 gacgttgccg gctttgtatg ccgacatgag cccgggcact cctaaagcgg aatccggtcg
      661 gaaggtgagg ggatccagga aatcgtcatc gatgcgacga tagatgacgt cgacccgatg
      721 cgggccctgc gttgtccgca tgtagacgat ctcgtccttg acgaagagat cgcggccttc
      781 gaccagctcg acgccgagtt tatcagcgag aaatgaatgc tcgtaatagg ccgagttgaa
      841 cacgcctggc gtgagcagga ccacgttcgg gtcccgcgac gccgacaatg gcgcgaccga
      901 tttcagcgtc gcaagcaact catccggata attctcgacg ggcgctatgc gatggcgcga
      961 aaacagttcc gggaaaagcc gcatcatgat ttcgcggttt tcgagcatgt atgagacgcc
     1021 ggacggcgtg cgtgcattgt cttccagaac gtaaaaggtc tcggcgtcga cgcgcacgat
     1081 gtcgatcccg gcaacatgca cataaatatc gtgcggtgcc tcctggccgc tcatctcggg
     1141 acggaaagcg ggattgcgaa atacgaggtc atccgggacc acgcccgcgc gcaaaatctc
     1201 gcgcgcaccg taaatgtcct tgatgaaagc attgagcgcg ctgacacgct gggtcagccc
     1261 cttttccagc agcctccatt cgctgcccga catgatgcgt ggaatgacgt cgaacgggat
     1321 caggcgttcc tgggcctcag cttcgccgta aaccgcgaag gtgatcccga tgcggcggaa
     1381 gatgagttcg gcttcacgcc gccggtagtc gagcacgtcg gccggcacct cggcgagcca
     1441 gcgggagagt tccccgtagg ccggacgaac gccgccgtca tgtcccttca tctcgtcgaa
     1501 ggcgacagtc atacgattcc cccactgact gccgggtacg caactcaccg cccggcagga
     1561 ccagtctcga tgttaccctc tatctcctgc aagcttcagg ccagggaaaa taccagtgaa
     1621 aacgggattt tagccgctcg ggccgaaaac tcgcacaggc gctgcccaat aattgagcgt
     1681 tcaggcgggt ggcggcttga gcggccacct aggccacgct aggtctttgc atctgcccgc
     1741 taggaaatgc gcatgaatgc caagcccgac atcgtcaccg ctgccgtgct ggtcatcggc
     1801 gacgagatcc tgtcgggccg caccaaggac aggaatatcg ggtatatcgc cgattatctc
     1861 acggccatcg ggattgacct gagagaagtg cgggtggtcg ccgatgacgc cgcggcaatc
     1921 gtggacgcgg tcaacgcgct ccgtgccaaa tatacctatg tattcaccac gggcggcatc
     1981 gggccgacgc atgatgacat aacggcagat tgtgtggcgg aagcattcag cgtgccactg
     2041 gaattccatc cggacgcgat agcagtcatc aagcaacgtc tcgccaagac cggtggtgaa
     2101 ttgaacgagg cgcgcctgcg catggcgcgc attccgcgtg gagccgagct tgttgcgaac
     2161 aaagtatcgg gtgcacccgg cttctggatc ggcaacgtga ttaccatggc cgggattcct
     2221 gccgtgatgc aggcgatgct cgatgaggtc gcgccgaagc tcaaaaccgg caccaagttg
     2281 ctgtcggaaa caatccgggc cgacgcgaag gaaggcgatg tcggtaccga gctcggagcg
     2341 atcgccaagg cgcatccgga aacgatcatt ggcagctatc cattcatcga cgaaaaacag
     2401 gggccgaata ccaatattgt ggtccgatca cgcgatgcgg agaagcttgc cgcggtgaag
     2461 gccgaggtcg agacaatgct tgtgaaggtc aagtcgcagt tggggatcgc gcgctaggat
     2521 gttgaccgag ccacaaactc cgttcattcc cgcggaagcg ggagcctccc gcggtacgca
     2581 gggacgaatg gtgtgaggcc cgcagatggt caattcgatt gcggaaaaaa agccacctcg
     2641 tccggaaaaa atctttcctg tttcatggga ccagttccac cgcgactcgc gcgctctcgc
     2701 ctggcgcctg catgatgccg gaccgtttga tgcaattgtt tgcatcacac gcggcggtct
     2761 ggtgcctgcg gccatcgtcg cgcgcgaact caacgtgaga atgatcgaaa ccatatcggt
     2821 gctgagctac cgcgactacg acaaccaggg cgaagtttcg gtgattaaag ggatcgctcc
     2881 cgaggtgacg ggactgcacg cgaagggaaa gcgcgtgctg atcgtcgacg atctggtcga
     2941 taccggcaag accgcgcgcg tcgtgcgaga cttgttgccg aacgcgcatt tcgccaccgt
     3001 gtatgcaaag ccgatgggac gccccctggt cgtcacattc atcaccgagg tctcgcaaga
     3061 tacctggatc tattttcctt gggatacggg cctggcgttc caaccgccga tccgtccggg
     3121 cggagactga ccaaacagaa aagatttcgg aggaaacaca atgctgacac gacgccatct
     3181 gctcgcgact gccggtgctg ctgcgtggac cgtcgccata tctggagccg gtgcgcagaa
     3241 atacgcgagc cagccaattc acattcttgt cggctatgcc gcgggagggg gcgtcgacat
     3301 tgtcgccagg ttgttgcagg agccgatgaa atcggcgctc ggccaaccca tcgtcattga
     3361 aaatcgtacc ggcgcgagcg ccatgctggc gacgaatgcg gtcgcgaagg cggcgcccga
     3421 tggctatacg ctgctgatgg cggcgtccgg cgaagtcgcc atcaatcatt tcctgttcaa
     3481 ggacaagatg agctacgagc ccacgaagga attggtgccg attgcaatga tcggcatcgt
     3541 accctgcgtc gttgtagtcg ccgacgcaac tccgatccgg agcccgaaag acctgatcgc
     3601 ctacgccaag gcaaatccgg gcaaggcatc gttttcgtca tccgggatcg ggaatcctca
     3661 acagctcgcc ggcgaactca tgaacaccat ggcgggcacg caagtcttgc acgtgccgta
     3721 tcgcggctcg gcgccggcgg tgacggacgt cgcgaccggc gccgtcacca tgagcttctc
     3781 gagcctcgct gccgcgttgc cgctgataca ggcgggcaag gtccgcgccg ttgcggtcac
     3841 ctcacgcgaa aggatgccgc agctgccgga tgttgcgccg ctgcgcgaag gcgcgcccgg
     3901 gctcgccgac tatgagctgc tcaattggtt cgcaatgttc ggcacggccg ggacgccgcc
     3961 cgagattgtc gaacgcctga acgggatcgt gaacgcggca ctgaaagatc caccaatcgc
     4021 cgacaaactg ctgccgcagg gaatcgtgcc aaagccgatg aaagttgccg agttcaaggc
     4081 tttcgtggat tccgagcgca cgaagttcgg aaagatcgtg gagcaggcca atatcaaatt
     4141 gagcaattga tcgcgtttgg gtgtattgtt gctgaaggaa aaagctccgc cgggaggacg
     4201 ccaatgaacg tcaagccgaa taccaaggat gccagcccag ttgacgacaa gcgctcacat
     4261 cacgtgcggc cgcaggacct gccgtgggaa aaaatgcgct tcgcaggctg ccagttcaag
     4321 acgctgctgt tcgatcccaa gagcggcctt gcgactgtcc tgatgaggat ggagcccggc
     4381 gcgaccttgc ccgaccacga gcatgtcctg atcgagcaga cgtatgtcct ggaaggatcg
     4441 ttggtggaca gggaaggtcc agatgccggt cttgagatca aggcaggcga attcgtctgg
     4501 cgtcccgccg ggagcaggca cgtggcctgg tgtcccaatg gcggcaccat gatcgcgatc
     4561 ttccaggtgc ccaacaagtt ctttgaacag gacggcaagg tgactgatgc cggcggcaag
     4621 gactggcagt cggcgtgggg acacgtgtta tcgaaataat ctgactcgcc gtcgcgtggg
     4681 cctggccgcc gcgcgccggc gggcgctcaa ggtttgccac gcggacgtgg cggaatggta
     4741 gacgcaaggg acttaaaatc ccttgggatg ttttcccgtg agggttcgaa tccctccgtc
     4801 cgcaccaaga caaaaaattc actaaaatca aatacttata gtgataatga cgtaggtcgc
     4861 cctttgttaa ggcactgaat aatatggact tgaaaccata tggcttgcag tgcattatat
     4921 gccatgaagt ggcaggtctt ttttcactct gaatttcaag ccgaatttga acaactaaag
     4981 gaggaagttc aggacgaact tttggcactg ggcgaactag ggcccaacct tggtcgcccg
     5041 aacgttgata ccctgaccgg ctctaagttc aagaatatga aggaacttag atttcaactt
     5101 gatggagttt ggcggtttgc gttcgctttt gacccacaga gaaatgcgat tgtcctctgt
     5161 ggcggagata aggaaaacga gaactcaaag agattttatg accaactgat agagacagcc
     5221 gataggagat ttacggctca cattgcgagc caacggaagg tagcgaagga gtagagccat
     5281 gaaaaacctc aaccaaatca ttggtgagct gtcgcctgag cgacgtgcga agattgaggg
     5341 tcgcgctcgt caactaatcg gcgaggaaat ggcccttcag caacttcgca aggcacgaaa
     5401 actcacacag aagcaaatgg cccgtgcgct taagatcgga caagatagcg tgtctcgct
//
LOCUS       DATDHO010000380         2560 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_18405, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000380 DATDHO010000000
VERSION     DATDHO010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2560
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18405"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1541)
                     /locus_tag="VIY07_07370"
     CDS             complement(<1..1541)
                     /locus_tag="VIY07_07370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6381611.1"
                     /translation="MPIYKAPVDDALFLLNDVFHLDHYGNLPGFSDASPDVVEAVLRE
                     AAKFSEEVLTPLNRVGDKEGCKRGADGSVTTPKGFKEAYTRIVEGGWTGISVPPEFGG
                     QGLPATLTELVNEFFCSANMAFAMYSGLTQGAIAALLAHAPDEIKQKYLPKMVEGVWT
                     GTMNLTEPHCGTDLGLLRSKAVKQTDGSYKISGTKIFISAGEHDLSENIIHLVLARIE
                     GAPMGTKGISLFVVPKVLVKDDGSLGARNAVSCGSIEEKMGIHGNSTCVMNYDGAIGW
                     LVGEENRGLNAMFTMMNEARLGVGVQGLALSEVAYQNAAAYAKERLQGRSISGAKYPD
                     KAADPIIVHPDVRRALMSMRAFNEAGRALVMWTALKSDVAHRSEDEKERRSADDHMGL
                     LTPVIKGVLTDGGFANAVLAQQIFGGHGYIAEHGMEQFVRDARIAQIYEGANGIQALD
                     LVGRKLGKDGGRAIMAFFNEVQSYLKERTGSDDMNVYLKPLGQSLAHLQEASMWFMQN
                     AIAKP"
     gene            complement(1720..2202)
                     /locus_tag="VIY07_07375"
     CDS             complement(1720..2202)
                     /locus_tag="VIY07_07375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013164917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEY6381612.1"
                     /translation="MANQYRAHAHAGMDRAGDVAEVPTGAREDGSLTIGELARDAGVT
                     LRALRFYQSKGLLTPRRNGSARLFSHDDRERLSLILQGKRLGFTLTEIREMLAARARG
                     CNKTLPIDRRKCVEQINLLERQRRDIDGALAELRQIYTEMFVASDFVEAPKVAASGKS
                     "
BASE COUNT          487 a          797 c          745 g          531 t
ORIGIN      
        1 tccggcttgg cgatggcgtt ctgcatgaac cacatcgacg cctcctgcag atgcgcgagc
       61 gattggccaa gaggcttcaa atagacattc atgtcatcgc tgccggtacg ctccttgagg
      121 tagctctgaa cctcgttgaa gaaggccata atggcacgcc cgccatcctt gccgagcttg
      181 cggccaacga ggtcgagcgc ctgtatgcca ttggctccct cgtaaatctg cgcgatccgg
      241 gcatcgcgca cgaactgctc catcccgtgc tcggcgatgt acccgtgccc cccgaaaatt
      301 tgttgcgcca acaccgcgtt ggcgaacccg ccgtcagtga ggacaccttt gatcaccggg
      361 gtcaggaggc ccatgtgatc gtcggcgctc ctgcgctctt tttcgtcctc ggatcggtgg
      421 gcgacatcgc tcttgagcgc agtccacatg accagcgcgc gtccggcttc gttgaaggcg
      481 cgcatgctca tcagcgcgcg ccgcacatcc ggatgcacga tgatcgggtc agccgcttta
      541 tcgggatatt tggcgccgga gatagaccgt ccctgcaggc gctctttcgc ataggccgca
      601 gcattctggt aagccacttc ggacagcgcg agaccctgca cgccgacgcc gagtcgcgcc
      661 tcgttcatca tcgtaaacat ggcgttgagg ccgcggtttt cctcgccgac cagccagcca
      721 atggcgccgt cgtaattcat gacgcaggtc gagttgccgt ggatccccat cttctcttcg
      781 atcgagccgc agctgacggc attgcgggct cccagagacc cgtcgtcctt gacgagaacc
      841 ttggggacca caaaaagtga gatgcccttg gtgcccatcg gagcgccttc gatccgcgcg
      901 agcaccaggt ggatgatatt ttcggacagg tcgtgctcgc ctgccgagat gaagatcttg
      961 gtaccgctga ttttgtagct gccgtccgtc tgcttcaccg cctttgatcg cagcagcccc
     1021 aggtcagtgc cgcagtgcgg ctccgtcaga ttcatcgtgc cggtccagac gccttcaacc
     1081 atcttcggca gatacttctg ctttatctcg tcgggagcat gagccaacag ggctgcaatg
     1141 gcgccttgcg taaggcccga gtacatcgcg aaagccatgt tggcggagca aaagaactcg
     1201 ttgaccagtt cggtcagtgt cgccggcaag ccctgccccc cgaattccgg agggacggat
     1261 atcccggtcc agccgccttc aacgatccgc gtgtaagctt ccttgaaacc tttgggagtc
     1321 gttacgctgc catcggcccc gcgcttgcag ccttctttgt cgccaacgcg attgagtggt
     1381 gtcagcactt cctcgctgaa ttttgctgct tcgcgcagca ccgcttccac cacgtcgggc
     1441 gaggcgtcgg agaaacccgg aagattgccg taatgatcga gatgaaagac gtcgttgagc
     1501 aggaacaacg catcgtcgac tggcgcctta tagatcggca tggtttgtct ccgcggcagg
     1561 agcgccgcaa ggtattactg gatgaggaag ctcgcgtctc ccctactcgc accgccccaa
     1621 cacggtcgca tgtgcgcagg ccacggcggt acgtcaatat gacgtagccg gtttacacct
     1681 atgttaaggg atggggaacg ccggaaatac cgataagtat caggactttc ccgaggccgc
     1741 gaccttgggt gcctcaacaa aatcagaggc aacaaacatc tccgtgtaga tttggcgcaa
     1801 ttcggcaagc gctccatcga tgtcacgccg ctgacgctcc agcagattga tctgctcgac
     1861 acatttgcgc cggtcgattg gcagagtttt gttacaaccg cgtgcgcgcg cagccagcat
     1921 ttcgcggatt tcggtcagcg tgaaacccag ccgcttgcct tgcaagatca gcgacaggcg
     1981 ctcgcgatcg tcatgactga agagccgggc cgaaccgttc cgccgcggcg tcagcaagcc
     2041 cttgctctgg taaaaacgta gagccctcag cgtcacgcct gcgtcgcggg cgagttctcc
     2101 gatggtaagg ctgccgtctt cgcgcgcgcc cgtcggtacc tcggcaacgt cacccgcgcg
     2161 atccatacca gcgtgagcat gcgcgcggta ttggttggcc atgtccccgt tccccggtac
     2221 cgaatcgtgt gaatcctagt catgcaacct gggagcgcgg tagcattcgg gtgttccgcc
     2281 cagaaaatat tacagtcaaa gcacagtggc ggtgacccgc atggctgacc tgccgccgga
     2341 ttagcgggcc tcactctgag caacgttaac cacttgttta ccgtgacagg caaaaagttg
     2401 gggcgtggac gaaggaccga gccccgtatc cacacggcgt tcccgcgccg gattccacga
     2461 gagtcgagcc cggctcttgg cgtctccacc tcggatgtgg gtgtgggcat gaaatttgac
     2521 ttttcgtgga gcgtcaaagg cgttcggccg gacgcgcgca
//
LOCUS       DATDHO010000381         2378 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_315323, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000381 DATDHO010000000
VERSION     DATDHO010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315323"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..641)
                     /locus_tag="VIY07_07380"
     CDS             complement(<1..641)
                     /locus_tag="VIY07_07380"
                     /inference="COORDINATES: protein motif:HMM:NF024299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6381613.1"
                     /translation="MAAEKLGIALKACLQAPMSEPQTAAELIQEGLVHHRAGQVSLAM
                     DRYTQVLRNDPRNADALYYIAVIACHEGQYQQGIDLARRSLSFRPRQAQAHNLIGQAL
                     HRMGKIKDALESFDNAIECDTNFADAYSNRANMLSDLGRNSEALSSFDRALALNPNSA
                     GDWLNRGATLHGAGRPAEAIASYDKAIALDPDFCISHCNRAHALCDLDRDAEAL"
     gene            750..2282
                     /locus_tag="VIY07_07385"
     CDS             750..2282
                     /locus_tag="VIY07_07385"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007563612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HEY6381614.1"
                     /translation="MKDILDRLEKRREEARLGGGKARIEAQHKRGKLTARERIELLLD
                     KGSFEEFDMFVEHRSNEFGMEKSKIPGDGVVTGWGTVNGRAVYLFSKDFTVFGGSLSE
                     THAQKIIKVQDMAMKARCPIIGLFDAGGARIQEGVAALGGYGEVFKRNVVASGVIPQI
                     SVIMGPCAGGDVYSPAMTDFIFMVKDTSYMFVTGPDVVKTVTNEVVTAEELGGASVHT
                     TKSGVSDGAFENDVECLLQMRRLIDFLPSNNESGVPEWPAYDETDRIDESLDTLIPDN
                     PNKPYDIKELILKVADEGDFFELSAAYAKNIVTGFGRIAGRTVGFVANQPMVLAGVLD
                     SDASRKAARFVRFCDAFGIPIVTFVDVPGFLPGTDQEYGGLIKHGAKLLFSYSQCTVP
                     LITVITRKAFGGAYDVMASKHVGGDVNYAWPTAQIAVMGAKGAVEIIFRADLEDPKKI
                     AARTKEYEERFLSPFVAAERGYIDDVIMPHSTRRRIARALAMLRNKHVEMPARKHDNL
                     PV"
BASE COUNT          464 a          662 c          778 g          474 t
ORIGIN      
        1 agcgcttctg cgtcgcggtc gaggtcgcac aaggcgtgag cccggttgca atgtgaaata
       61 cagaagtccg gatcgagggc gatcgccttg tcgtaacttg caatcgcctc cgcgggtcgt
      121 cctgcgccgt gcagcgtcgc gccgcggttg agccagtcgc cggctgaatt gggattgagc
      181 gccagtgcgc ggtcaaagct ggacagggcc tcgctgttac ggccgagatc actgagcatg
      241 tttgcgcgat tgctgtacgc atccgcgaaa ttcgtgtcgc actcgattgc gttatcgaag
      301 ctctcgagtg cgtccttgat cttgcccatt cggtgcagcg cctgcccgat gaggttgtgc
      361 gcctgcgcct gccgcgggcg gaaggagagg gagcggcggg caagatcgat gccctgctgg
      421 tactggccct cgtggcaggc gatcaccgcg atgtaataga gcgcatcggc attgcgtggg
      481 tcgttgcgca gcacctgcgt atagcggtcc atcgccaatg aaacctggcc ggcccggtga
      541 tggaccaggc cttcctggat aagctcggcg gctgtctgcg gttcgctcat gggggcttgt
      601 aagcaggctt tgagcgcgat gccaagcttt tccgctgcca ttccgggttc gctcgcttaa
      661 cgggcgtccg gaatgacgat aggtgggtct catggtatgc cttttcaggg actgaaatct
      721 cactgtggcg ggcaggggcc aaaatagaaa tgaaagacat cctcgacagg ctcgagaaac
      781 ggcgtgaaga ggcccgcctt ggcgggggca aggcgcgcat cgaggcccag cacaagcgcg
      841 gcaagctgac agcccgcgag cgcattgagc tgttgctcga caagggatcg ttcgaagagt
      901 tcgacatgtt cgttgagcac cggtcgaacg aattcggaat ggagaagtcg aaaattcccg
      961 gcgacggcgt cgtcaccggc tggggcaccg tcaacgggcg tgcggtttat ctcttttcaa
     1021 aagatttcac cgtcttcggc ggttcgctgt ctgaaacgca cgcgcagaag atcatcaagg
     1081 tgcaggacat ggcaatgaag gcgcgttgcc cgatcattgg cctgttcgat gccggcggtg
     1141 cgcgcatcca ggagggcgtg gccgcgcttg gcggctatgg agaagtattc aagcgcaacg
     1201 tggttgcatc gggcgtcatc ccgcagatca gcgtgatcat gggtccctgc gcgggcgggg
     1261 acgtctattc gccggcgatg accgacttca tcttcatggt gaaggacacg agctacatgt
     1321 tcgtgaccgg tccggacgtc gtgaagaccg tcaccaacga agtcgtcacc gcggaggagc
     1381 ttggcggggc ttcggtgcat acgacgaagt cgggcgtgtc tgacggcgcg ttcgagaacg
     1441 acgtcgagtg cctcctgcag atgcggaggc tgatcgattt tctgccgtcg aacaacgaga
     1501 gcggcgtgcc ggagtggccg gcctatgacg aaacagaccg aatcgatgaa tctctcgata
     1561 cgctaattcc cgacaatccg aacaagccct acgacatcaa ggaattgatc ctgaaggttg
     1621 ccgacgaggg cgactttttc gagctctccg cggcgtatgc gaagaatatc gtcactgggt
     1681 tcggccgcat cgccggtcgt accgtgggat tcgtcgccaa ccagcccatg gtgctcgccg
     1741 gtgtgcttga cagcgatgcc tcgcgaaagg cggcgcgatt cgttcgcttt tgcgacgcgt
     1801 tcggcattcc gatcgtcacc ttcgtcgatg tgcccggttt tttgcccggc accgaccagg
     1861 aatatggcgg gctgatcaag catggcgcca agctgctgtt ttcctacagc cagtgcacgg
     1921 tgccgttgat aaccgtgatc acgcgcaaag ctttcggcgg ggcctatgac gtgatggcat
     1981 cgaagcacgt tggcggggac gttaactacg cctggccaac ggcgcagatc gccgtgatgg
     2041 gcgccaaagg cgcggtcgag atcatcttcc gcgccgattt ggaggatccg aaaaagattg
     2101 ccgcgcggac caaggagtac gaggaacgtt ttctgtcacc gttcgtggcg gccgagcgcg
     2161 gatatatcga cgatgtgatc atgccgcact cgacacgccg ccgcatcgcg cgtgcgcttg
     2221 cgatgttgcg caacaagcat gtggagatgc cggcgcggaa gcatgacaat ttaccggtgt
     2281 aaaaagagag ggctgccatg ttcgagcagg ccattcgcga ggcgatggac aacgcctcca
     2341 aagccatcac tgccgatccc gacaaagcgc gcgttaag
//
LOCUS       DATDHO010000382         7939 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_315426, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000382 DATDHO010000000
VERSION     DATDHO010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7939)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7939)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7939
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_315426"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..249
                     /locus_tag="VIY07_07390"
     CDS             <1..249
                     /locus_tag="VIY07_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008196659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HEY6381615.1"
                     /translation="YLKEAHRLYKVLNTRLEGREFVADQYSIADIAIWPWISRFEWQT
                     IDMKQYPNVKRWYETIAARPAVQKGYKVPKDMGPVPVP"
     gene            369..1028
                     /locus_tag="VIY07_07395"
     CDS             369..1028
                     /locus_tag="VIY07_07395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEY6381616.1"
                     /translation="MASRPKQAAPRPPPRLYLITPQIADASAFSAQLISALEAGDVAA
                     VLLRLGDGSERAQINCAKSLAGPVQSKECALLIDGRFDLVARAGADGAHLTGVAAFTD
                     AIGQLKPERIAGAGGLVSRHDAMVVAEQGADYVMFGEPDAIGRGPSLSAIEERIGWWA
                     EVFEIPCVGYAASLDEIAPLALAGADFVALGDFVWRDDDAIASVIAEAGRALRLPEPA
                     A"
     gene            1025..2017
                     /locus_tag="VIY07_07400"
     CDS             1025..2017
                     /locus_tag="VIY07_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6381617.1"
                     /translation="MRQNTRDFTLGVLLTIALIAPTALAQAPKNAPPQWPAPPQPSAN
                     NTDQSNIDIAYGAYQRGLYITAFNEATKRAQQNDAAAMVLLGEMYAQGLGVGRDDAMA
                     SQWYKAAAEKGNRDALFALALFSFQGRAGPSNQAEAARLLEAAAKLGHAGAAYNLALL
                     YLQGQQFPQDFRRAGELFTAAAEAGNSEAQYALATLYKEGRGVTKDLSKAMRLMQQAS
                     IAGNVDAMVEFAIAQFNGDGVNKDEAASAQLFLKAAHLGNPVAQNRLARILMAGRGMP
                     ADATEAVKWHIVAKAGGASDPDLDVFAAKQTPAIREAADKVARKWLSTVTPARP"
     gene            2052..2849
                     /locus_tag="VIY07_07405"
     CDS             2052..2849
                     /locus_tag="VIY07_07405"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEY6381618.1"
                     /translation="MQHSALLNVMIGAARKAARALKRDFGELEKLQVSMKGPANFVSA
                     ADHRAEETLHAELMKARPGYGFLGEEGGRRVGADKTHTWIVDPLDGTTNFLHGIPQFA
                     ISIALERDATIVAGLIYNPANDEMFVAERGKGAFLNDQRIRVAARRRLVYAVIACGLP
                     HHGHGDIGLSRKEVGAMQEHVAGLRRFGAAALDLAWVAAGRIDGYWERHLKPWDLAAG
                     LIMVREAGGFVSDCDGGDDIFEKGHVVAGNEIIHKELVAVLKGAGKG"
     gene            2978..3958
                     /locus_tag="VIY07_07410"
     CDS             2978..3958
                     /locus_tag="VIY07_07410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotA"
                     /protein_id="HEY6381619.1"
                     /translation="MAKQLDPLKLSSPRIFLFRMLVFVILVGLITFVLHKQIQVAFMA
                     NPGLNALIIGVLAIGIVLSFRQVLRLYPEIAWVNNFRLADPGLAVERAPVLLAPMAAI
                     LGSRVGRMAMSSQLMRGILDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVTS
                     VGSVIQGLKANGDSGSMFDSLRDGLAAPLSGMGISFSSSLFGLAGSLVLGFLDLQSSQ
                     AQNRFYTELEDWLSTTVYDQAAEPALGAGVGGEVRSAIERLRGAVDQFEAGKSASAAM
                     ANLAEAIQGLVHHMRTEQQMIRDWVDSQAAQQREIKKLLEVLVREHAKLS"
     gene            3963..4988
                     /locus_tag="VIY07_07415"
     CDS             3963..4988
                     /locus_tag="VIY07_07415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan -binding protein"
                     /protein_id="HEY6381620.1"
                     /translation="MALARTRRSESGMNYWPGFVDALSTLILGIIFLLTVFVVVQFYL
                     QQEVAGKDTALNRLNAQIAQLTELLGLEKSGKAGLEDQLAQLRATLAVAESERDRLRS
                     SADSAGAGAAAAQGRASELAGQLEGEKKITARALAQVEVLNQQIAALRRQLAALEQTL
                     DATEKKDKESQSRITELGQRLNLALAERVNELKRYRSDFFGKLREILGDRSDVRVVGD
                     RFVLQSEVFFDTGRADLKPEGVVELDKVAMALVELEKKIPSDLAWVLRVDGHTDVRPI
                     TGLFRSNWDLSAARAIAVVQYLIARGVSPQHLVAAGFGEFQPIDLGRTEDSYRRNRRI
                     EFKLTER"
     gene            4985..5440
                     /locus_tag="VIY07_07420"
     CDS             4985..5440
                     /locus_tag="VIY07_07420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6381621.1"
                     /translation="MSEKRYTLRRYTAADEDAAIELWRRTWSKHYPHLDFNARLAWWR
                     ERWRNELVPVAQIVLAEGGDDLIGFVTVDPKTMYLDQIVVAPEYWGSDIATALLDEAK
                     RLSPKGLDLLVNKDNFRAIRFYEKHGFMYAGEDKNPVSGIAVNRMAWRS"
     gene            complement(5437..7245)
                     /locus_tag="VIY07_07425"
     CDS             complement(5437..7245)
                     /locus_tag="VIY07_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HEY6381622.1"
                     /translation="MSFSTDGRGLDVASAPARGEPRKLRIKPLARLIPYIARYRGRAF
                     AALAALMVAALTTLVVPVAVRRMIDFGFSDKAVELIDSYFAVMIGVVALLAISSALRY
                     YLVTTLGERIVADLRSDVFAHLTRLSSAFFDTARTGEIVSRLTADTTQIKSAVGASVS
                     IALRNLLLFLGGAAMMVVTSPRLSLFVLGAIPVIVLPLVAFGRAVRRRGRAAQDTLAD
                     ASGYADEMIGAVRTLQAYTNEKLAQSRFSSAVEDAYAAARDATKARGVLTAVVIFLVF
                     ASIVVVLWVGAQDVLAGDITPGRLGQFVLYAVFAAGGLSELSQVWGEIAQASGAAERL
                     FEIIDAEPQIKSPPRPVALPKPAAGEVEFRDVNFAYPGRPNLQVLDQVSFRVAPGEKL
                     ALVGPSGSGKSTIFHLIQRFYDPSSGAISFDGIRLTEVDPEALREQIALVPQDAVVFG
                     VSVRENIQFGRPDATDQEIEKAAEAAHAAEFIRRLPSGYDTPVGERGVTLSGGQRQRI
                     AIARAILRKAPLLLLDEATSSLDAESETLVQQALKRLMLDRTSIVIAHRLATVQTCDR
                     ILVLDHGRIVEQGNHASLASAGGLYARLAKLQFEMA"
     gene            7400..7636
                     /gene="rpmE"
                     /locus_tag="VIY07_07430"
     CDS             7400..7636
                     /gene="rpmE"
                     /locus_tag="VIY07_07430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HEY6381623.1"
                     /translation="MKQDIHPGYHTIKVVMTDGSEFTTRSTWGKEGDVLHLDIDPKSH
                     PAWTGGQQQIVDRGGRVSRFQKKFSGFLKGDEKK"
     gene            complement(7702..>7939)
                     /locus_tag="VIY07_07435"
     CDS             complement(7702..>7939)
                     /locus_tag="VIY07_07435"
                     /inference="COORDINATES: protein motif:HMM:NF018972.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1465 family protein"
                     /protein_id="HEY6381624.1"
                     /translation="KEKTKVKLACTDGHDPANVELLPPTLRGLIERSQKLYAKVRRLD
                     ATMYNQNSSERPAPANPVERQLGLLKAAFGADSV"
BASE COUNT         1633 a         2375 c         2387 g         1544 t
ORIGIN      
        1 tatctgaaag aggctcatcg actttacaag gtgctcaata cgcgcctgga aggtcgcgag
       61 ttcgtggctg atcaatattc cattgccgac attgcaatct ggccgtggat ttcgcgcttc
      121 gaatggcaaa ccatagacat gaagcaatat cccaacgtga agcgttggta tgaaaccatt
      181 gccgcgcgtc cggcagttca gaagggctac aaggtaccga aggacatggg tcctgtgccg
      241 gtgccctgac gccgtcatcg ggaccgtgcc cgtagtcgcg agaggctgtt cgcaaacgcg
      301 caaaaacgcc gcagtaaact ccctcttcgg gtcaattttc cgccggattg ggttagcatg
      361 cgaagatcat ggcttcgcga cctaaacagg cagcccctcg tccgccgccg cgactttacc
      421 tcatcacgcc gcaaatcgcg gacgcatctg cattttccgc ccagttgatc tctgcgctgg
      481 aagcgggaga cgttgcggcg gttctgctgc gccttggcga tggctccgag cgtgcgcaga
      541 tcaattgcgc gaagtcactc gccggcccgg tgcaaagcaa ggaatgtgca cttttgatcg
      601 acggtcgctt tgaccttgtc gcacgcgccg gagccgacgg ggcgcatctg accggggtcg
      661 cggccttcac ggacgcgatc ggccaactta agcctgaacg cattgccggc gcgggcggac
      721 tcgtgagccg gcacgacgcg atggtcgtcg cggagcaagg agcggattac gtcatgttcg
      781 gagagccgga tgcgataggc agaggtccgt ccttgtccgc gatcgaagaa cgcatcgggt
      841 ggtgggcgga ggtgttcgaa attccgtgcg tcggatatgc ggcatcgctc gatgaaattg
      901 cgccgctcgc actcgccggc gccgatttcg tcgcgcttgg agattttgtc tggcgggacg
      961 acgacgcgat cgcatcggtc attgcggagg ccggtcgggc gctgcggctg ccggagccgg
     1021 ccgcatgagg caaaacactc gcgacttcac gcttggcgtg cttttgacga tcgcattaat
     1081 tgcaccaacc gcgctcgcac aggctcccaa aaacgcgccg ccacagtggc ccgcgccgcc
     1141 acagccatcg gcgaacaaca ctgaccagtc caacatcgac attgcctacg gagcctatca
     1201 gcgcgggctt tacatcacgg cgttcaacga ggcgaccaaa cgcgcgcaac agaatgatgc
     1261 ggccgctatg gtcttgctcg gcgagatgta tgcacaaggt ctcggcgtcg gtcgcgacga
     1321 tgcgatggcg tcgcagtggt acaaggcggc cgccgagaaa ggtaaccgcg acgcgctgtt
     1381 cgcgctggca ttgttcagtt ttcaggggcg ggcgggcccg agcaatcaag ccgaggcggc
     1441 gcgacttctc gaggccgctg ccaagctcgg ccacgcggga gccgcgtata acctcgccct
     1501 gctttatctc cagggtcagc agtttccgca ggatttcagg cgcgccggcg aactcttcac
     1561 agccgccgcg gaagctggca attccgaagc acagtatgcg ctggcgacat tgtacaagga
     1621 aggtcgtgga gtaaccaaag atttaagcaa ggctatgcgg ctgatgcagc aggcatctat
     1681 cgccggcaat gtcgatgcaa tggtggaatt cgcaattgcc cagttcaacg gtgacggcgt
     1741 caacaaagac gaggctgcct ccgcgcaact gtttctgaaa gctgcccatc ttggcaatcc
     1801 ggtcgcgcaa aatcgactcg cgaggatcct tatggccggt cgaggcatgc ctgctgacgc
     1861 gaccgaagcg gttaaatggc acatcgttgc gaaggcaggt ggcgcaagcg acccggacct
     1921 cgacgtattc gctgccaaac aaacacctgc catacgcgaa gccgcagaca aggtagccag
     1981 aaaatggttg tcgacagtga cgccggcgcg cccttgacgg cgcctgccat cacaggcaga
     2041 tcgcacgcgt catgcagcat tccgcactgc tcaacgtgat gatcggcgcc gcgcgcaagg
     2101 ctgcgcgcgc gctcaaacgc gacttcggcg agttagaaaa attgcaggtt tcaatgaaag
     2161 gtcccgccaa cttcgtctca gcggcggatc atcgggccga agaaacgctc catgcggaac
     2221 tgatgaaggc caggcctggg tatggctttc tcggagaaga aggcgggcgt cgcgtaggtg
     2281 ctgacaaaac ccacacctgg attgtggatc cgctcgatgg cacgacgaat tttctgcacg
     2341 gcatccccca gttcgcgatc tcgatcgcgc ttgagcggga cgcaaccata gtagctgggc
     2401 tgatctacaa tcctgcgaac gacgaaatgt ttgttgcgga gcgcggcaaa ggcgcgttcc
     2461 tcaacgacca gcgcatccgg gtcgcagcgc ggagacgcct tgtctacgca gtgattgcct
     2521 gcggactacc gcatcatggc catggggata tcggactttc gcgaaaagaa gtgggcgcga
     2581 tgcaggaaca cgttgccggt ctgcgccgtt tcggcgcagc cgcgcttgat ttggcctggg
     2641 tcgcggctgg gcggatcgac ggttattggg agcgacacct caaaccctgg gacctggcgg
     2701 cgggattgat catggtacgc gaagccggtg gcttcgtttc cgattgtgac ggcggcgacg
     2761 acattttcga gaaaggtcac gtcgtcgctg ggaatgaaat catccacaag gagctggtcg
     2821 ctgtgcttaa aggggctggc aagggctagt cttccgcaat ttcaactcaa tcagcggctt
     2881 aatcctgacg cctagttcca ccacaactgc tttttccctg tcaccagtct gtgtcatagt
     2941 actcggcagg ctatattcgg cttaactcct gaacctaatg gccaaacaac tagaccccct
     3001 caagctctcg tccccccgga ttttcctgtt caggatgctc gttttcgtca tcctggtcgg
     3061 gcttatcacc ttcgtgctgc acaagcagat ccaagtggcg ttcatggcaa atccaggcct
     3121 gaatgcgctg atcatcgggg ttctggccat tggcattgtg ctgtcatttc gtcaggtgct
     3181 gcggctttat ccggaaattg cctgggtcaa caacttccgt cttgccgacc ccgggctcgc
     3241 ggtcgaaaga gcgcctgtcc tactcgcgcc gatggctgca attctcggaa gccgcgtcgg
     3301 gcgcatggcg atgtcctcgc aactgatgcg cggcatcctc gattcaatcg caacccggct
     3361 tgatgaagct cgcgacattt cccggtatat gaccggtctg cttgttttcc tgggcctgct
     3421 tggcacgttc tggggcctga tcgagaccgt cacctcggtc ggctcagtca ttcagggact
     3481 aaaggcaaac ggcgacagcg gatccatgtt cgattcgctg cgcgacggct tggctgcgcc
     3541 actctccggc atgggcattt cgttctcgtc gtcgctattt ggtctggccg gctcgctcgt
     3601 gctcggcttc ctcgatctgc aatccagcca ggcgcagaac cgcttctata cagaacttga
     3661 agattggcta tccacgacag tctacgatca ggctgcggag cccgcgcttg gcgccggcgt
     3721 cggcggcgag gtgcgttccg caatcgagcg gttgcgaggc gcagtcgacc agtttgaggc
     3781 aggaaagtcg gcctctgctg ccatggcgaa tctcgccgag gccattcagg gcctggtcca
     3841 tcatatgcgc accgaacagc agatgatccg tgattgggtc gactcgcaag ccgcccagca
     3901 acgcgagatc aagaagttgt tggaggttct ggtgcgggag cacgcaaagt tgagctgaag
     3961 cgatggcgtt ggcacgaacc cgccgcagtg aaagcggcat gaactactgg ccgggcttcg
     4021 tcgacgcgct gtcgacgctg atactcggta tcattttcct gcttaccgta ttcgtggtgg
     4081 tgcagttcta tttgcagcag gaagttgccg ggaaggatac cgcactcaat cggttgaacg
     4141 cccagatagc acagctcacc gagctgctgg ggcttgaaaa atccggaaag gccgggctcg
     4201 aagatcaact ggcgcagttg cgagcgacgc tcgccgtcgc cgagagcgag cgggatcggt
     4261 tgaggagttc cgccgacagc gccggtgcgg gagccgcagc ggctcaaggc agggcttcag
     4321 agctggcggg tcagctcgaa ggcgagaaaa aaatcacggc gcgagcgctc gcccaagtcg
     4381 aggtgctgaa ccaacagatt gcagcattgc gccgtcaact cgccgccctc gagcagacat
     4441 tggacgcgac cgaaaagaag gacaaggagt ctcagagccg catcaccgag cttggtcagc
     4501 ggcttaatct tgcgctcgcc gagcgcgtta atgaattgaa gcggtatcgc tcggatttct
     4561 tcggcaagct tcgggaaatt ctcggcgacc gttcagatgt ccgcgtggtg ggagaccgtt
     4621 tcgttctcca atccgaggta ttcttcgaca ccggccgggc cgatctcaag cccgagggcg
     4681 tcgttgaact tgataaggtg gccatggcat tggttgagct ggaaaagaaa ataccttccg
     4741 accttgcctg ggttttgcgc gtcgacggcc ataccgacgt aagaccgatt accgggctgt
     4801 tcagatcgaa ctgggatttg tcggccgcgc gcgccatcgc ggttgtgcaa tatctcatcg
     4861 cgagaggtgt atctccacag caccttgttg ccgccggctt cggcgaattt cagccgatcg
     4921 atctcggcag gaccgaggat tcttacaggc gcaatcgtcg catcgagttc aagctgaccg
     4981 aacggtgagc gaaaaacgct acacgctccg ccgttacacc gcggccgatg aagacgcggc
     5041 aattgaattg tggcggcgca cctggtcgaa gcactacccg catcttgatt ttaatgcgcg
     5101 cctggcgtgg tggcgcgagc gttggcgcaa cgagctggta ccggtagcgc aaatcgttct
     5161 tgccgaaggt ggcgatgatc tgatcggctt tgtcaccgtc gatccaaaga cgatgtatct
     5221 cgatcagatc gtcgttgcgc ctgaatattg gggttcggac atcgcgactg ccttgctgga
     5281 tgaggccaaa cgcctttcgc cgaagggcct cgatcttctg gtcaacaagg ataacttccg
     5341 cgccatccgg ttctacgaga agcacggctt tatgtacgcc ggcgaagata aaaacccggt
     5401 gtccggaata gccgtcaacc ggatggcctg gcgctcctaa gccatctcga attgcaattt
     5461 cgccagcctg gcgtagagcc cgccggcgga cgccagcgac gcatgattgc cctgttcgac
     5521 gatgcggccg tgatcgagca ccaggatgcg atcgcaagtc tgcaccgtgg cgaggcgatg
     5581 cgcgatcacg atacttgttc gatcgagcat cagccgcttg agagcctgct gcaccagagt
     5641 ttcgctttcc gcatccagtg acgatgtcgc ctcgtcgagc aataacagcg gtgctttccg
     5701 caaaatggcg cgcgcaatcg cgatacgctg ccgctgaccg cccgataacg tcacccctcg
     5761 ttcgccgacc ggcgtgtcat agccgctcgg caatcgccgt atgaactcgg cggcgtgcgc
     5821 tgcctccgca gccttttcaa tctcctggtc ggtcgcgtcc ggccggccaa attggatgtt
     5881 ttcccgcacg ctgacgccaa acacgacggc atcctgcggc accagcgcga tttgctcgcg
     5941 cagagcctcc ggatcgactt cggtgagtcg aatgccgtcg aaactgatgg cccccgacga
     6001 cggatcatag aaccgctgaa tcaagtgaaa gatggtgctc ttgcccgagc ctgatggacc
     6061 cacaagtgcg agcttctcac cgggcgccac ccgaaatgaa acctgatcga gaacctgcaa
     6121 gttgggccga cccggatacg caaagttcac atcgcggaat tcgacctcgc cggcagcggg
     6181 ctttggcaac gcgaccggcc gcggcggcga cttgatctgc ggctccgcat caatgatttc
     6241 gaaaagacgt tctgccgctc cggacgcctg tgcgatttct ccccagacct ggctgagctc
     6301 actgaggccg cccgccgcga acacagcata gagaacaaac tgcccgagcc gcccgggcgt
     6361 gatgtcaccg gcgagcacgt cttgcgcgcc gacccatagg accacaacga tgctggcaaa
     6421 caccagaaag atcacgacgg cagtcagcac accgcgtgcc ttggtggcat cgcgcgccgc
     6481 agcataagcg tcctccacgg cggaggagaa acgcgactgc gcgagtttct cattggtgta
     6541 agcctgcagc gtgcgaaccg ccccgatcat ttcatcggcg tagccagacg catcggcaag
     6601 cgtgtcctga gcggcacgac cgcgtctgcg aaccgcgcgt ccgaaagcga ccaacggaag
     6661 cacgatcacc ggaattgcac ccagcacgaa tagcgacagc cgggggcttg tgacgaccat
     6721 catggcggca ccgcccagga acagcaggag gttacgcaat gcaatcgaaa ccgaggcgcc
     6781 gacggcagat ttgatctgcg tcgtgtcggc tgtcagccgt gacacaattt ccccggttcg
     6841 tgccgtatcg aaaaaggcag atgacagacg cgtgagatgg gcgaatacgt ccgagcgcaa
     6901 gtcggccacg atgcgttcgc ccagcgtggt caccaggtaa taacgcagcg cgctggagat
     6961 cgcgagcaag gcgacgacac cgatcatcac cgcgaaatag ctgtcgatca gctccaccgc
     7021 tttgtcggag aagccaaaat cgatcatccg gcgtactgcg accggcacaa caagcgtggt
     7081 aagcgcggcg accatcagcg ccgccagtgc cgcgaaggcg cggccacgat agcgcgcgat
     7141 atagggtatc aggcgagcta acggcttgat cctcagcttg cgcggctctc ctcgcgccgg
     7201 cgcgctcgca acatccagcc ccctcccgtc ggtggaaaaa ctcatgcaaa ccctctgcca
     7261 ccgcccccac gttccttaat gccttgcggc cccgatggcg gtcaattgcc gtggcttgcc
     7321 gcctgcaatc tgctgctgta taggagcggc caaattcagc cctctatcgg cgcgataaac
     7381 gcgcccacgg aaaacaacga tgaaacagga tatccatccg ggctatcaca ccatcaaggt
     7441 ggtgatgacc gacggcagcg aattcaccac ccgctccacc tggggcaagg aaggtgatgt
     7501 cctgcacctc gatattgatc cgaagtcgca tccggcatgg accggcggtc agcagcaaat
     7561 cgtggaccgc ggtggccgcg tatcgcgctt ccagaaaaag ttctccggtt tccttaaagg
     7621 cgacgagaag aaataagcga gagtttcgta aaatctaaaa cccccgcctc gtgcgggggt
     7681 ttttgcttgc cgatttgtct cctagacgct gtcggctccg aatgcggcct ttaacaaacc
     7741 aagctggcgc tcaaccggat tggcaggtgc aggacgctcg gaactgttct ggttgtacat
     7801 cgtcgcatcg agacgccgca ccttcgcata gagcttctgc gaacgctcga tgagcccgcg
     7861 cagtgtcggc ggcagcagtt cgacgttggc gggatcgtgg ccgtccgtgc acgcaagctt
     7921 gaccttcgtc ttttccttg
//
LOCUS       DATDHO010000383         3133 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_364609, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000383 DATDHO010000000
VERSION     DATDHO010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3133
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_364609"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VIY07_07440"
     CDS             complement(<1..226)
                     /locus_tag="VIY07_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6381625.1"
                     /translation="MRALPVFISATFLFAATALAQDAAATFPSKPIKIIVCVPAGGGV
                     DTVTRIVAEGLHQKLGQPVIVENRAGAAGNI"
     gene            complement(251..1465)
                     /locus_tag="VIY07_07445"
     CDS             complement(251..1465)
                     /locus_tag="VIY07_07445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007761608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6381626.1"
                     /translation="MDLPLSEFRRMEVEEFDTPKLLAHASKQAAERGYRNFPIVDVDS
                     HHYESESIEEILEYMDDPVLQQLARSARQANAKSVGMLPAGVGYQDMGGRVMRYAVRG
                     LEKTQRGEQRDIALTRRWMDAIGIDVAVMFPTPMLQLGLHPQIEVEIALARAYNRWLT
                     ERVLAHEPRIRSMLYLPFNDADAALRTVQEFGRCKGVVGFMVTSARYRPVHHNSYMKT
                     YALLEEMQLPLAFHAGYNWNDQTVGMMNRFISVHALGFVFYNMVHLANWITNGLPERF
                     PKLKILWVESGLAWVPFMMQRFDNEYMMRSSEAPALKKKPSEYMRDMYFSSQPMEKAD
                     MAALEQTFRMIKAETQLLYSSDYPHWDFDLPSTIYDLPFLNEQAKRNILGGNAIRLFG
                     LKLPAQKLARVA"
     gene            complement(1605..1853)
                     /locus_tag="VIY07_07450"
     CDS             complement(1605..1853)
                     /locus_tag="VIY07_07450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381627.1"
                     /translation="MSWQAEATASTAERPSDAQVQDMLANAVRLYAERAAERDAALPA
                     FAPDAVSATEVMVTVTAMLKAVNVQVFELGMWQAWGGR"
     gene            complement(1837..2205)
                     /locus_tag="VIY07_07455"
     CDS             complement(1837..2205)
                     /locus_tag="VIY07_07455"
                     /inference="COORDINATES: protein motif:HMM:NF012575.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEY6381628.1"
                     /translation="MPEVFVAKAAEFPDGERRIVTHKGHEIGVFHWQGKFYAYENLCV
                     HQGGPACEGIMMHKVEDVIGPDRSWLGQKFSADEIHFVCPWHGYEYDLKTGECAADRS
                     LRLKSFEVIRRGEDIYVVAG"
     gene            2346..3089
                     /locus_tag="VIY07_07460"
     CDS             2346..3089
                     /locus_tag="VIY07_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY6381629.1"
                     /translation="MDSAAILAAIAGAFLLAGFVKGVIGLGLPTVSIGLLGLVMTPAQ
                     AAAILVVPSLVTNVWQAAVGGGLLALTRRLWPMLAGICVGTVVGVMLLPHDDSGRATV
                     WLGLALVIYAVFGLVKGHFVVPPSMEMWLGLLMGAVTGAITVATGIFVIPGTPYLHSL
                     SFERDKLVQALGLSFTVSTVTLAAALAYTGHLGTSLVGPSIGALAAALVGMWLGQLTR
                     GKIREETFRVWFFIGLLLLGGHLALRGVL"
BASE COUNT          574 a          942 c          944 g          673 t
ORIGIN      
        1 caatattacc agcggcgcct gcgcgatttt cgacgatcac aggctggcct aacttctggt
       61 gcagtccctc ggcgacgatg cgggtcactg tatcgacgcc gccgcccgcg ggcacgcaaa
      121 caatgatctt gatcggcttg ctggggaacg tggctgcggc atcctgcgcc agcgcggttg
      181 ctgcgaagag gaacgtggcc gaaataaaaa caggaagcgc gcgcaccttg ttctccttac
      241 ccgcccgcaa ttacgcgacc cgggcgagct tttgagccgg caacttgaga ccgaacagcc
      301 ggatggcatt tcccccgaga atattgcgtt tcgcctgctc gttcaaaaag ggcagatcgt
      361 agattgtcga gggcaggtcg aaatcccagt gcggatagtc ggatgagtag aggagttgcg
      421 tctccgcctt gatcatgcgg aaagtctgtt ccagcgcagc catgtcggcc ttttccatcg
      481 gctgcgagga aaaatacatg tcgcgcatgt attcgctcgg ctttttcttc aatgcaggcg
      541 cttccgaaga acgcatcatg tattcattgt cgaatcgctg catcatgaac ggcacccacg
      601 ccaacccgct ttcgacccac agtatcttca atttgggaaa ccgctccggc agcccattgg
      661 tgatccagtt ggcgaggtga accatattgt agaacacgaa gccgagagcg tgcaccgaga
      721 tgaaacggtt catcatgccg accgtctggt cgttccaatt gtagccggca tgaaacgcta
      781 gcggcagctg catttcttcc agcagggcgt aggtcttcat gtatgaattg tggtgtacgg
      841 gacgatagcg cgccgacgtc accatgaatc cgacgacgcc cttgcatcgg ccgaattcct
      901 gcaccgtccg caacgcggcg tcggcgtcgt tgaagggcag gtacaacatg gaacggatgc
      961 gcggctcgtg cgccagcacg cgttcggtga gccaacgatt ataggcgcgc gccagcgcga
     1021 tctcgacttc gatctgcgga tgcagcccga gctgcagcat cggcgtggga aacatgacag
     1081 ccacgtcgat gccgatggcg tccatccatc gccgcgtcag cgcgatatcg cgttgctcgc
     1141 cgcgttgggt tttctcgagg ccgcgcactg cgtagcgcat gacccgaccg cccatgtcct
     1201 ggtagccgac gccggcggga agcatgccga cgctcttggc gttggcctgc cgcgcactgc
     1261 gcgcaagctg ctgcagcacc ggatcatcca tgtattcgag aatttcctcg atggattcac
     1321 tttcgtaatg gtgtgaatcc acgtcgacga tggggaaatt cctgtagccg cgctcggccg
     1381 cctgcttgct cgcatgcgcc agcagcttcg gggtgtcgaa ctcctcgacc tccatgcggc
     1441 gaaactcgct gagggggaga tccatctttt actccatgtc attccggggc cggccgaagg
     1501 ccggagcccg gaatccagag gtttgcacgc tgggtgttct tttctggatt ccgggtccgg
     1561 ccctgcgggc cgtcccggaa tgacaaccta ggaatgcacg cattttaacg tccaccccac
     1621 gcttgccaca tgccgagctc gaagacctgc acattgacgg ctttgagcat ggcggtgacc
     1681 gtgaccatca cctcggtcgc gctgacagcg tcaggcgcaa aagccggcaa cgcggcgtcg
     1741 cgttctgctg cccgctcggc gtagagccgg actgcgttcg ccagcatgtc ctgaacctgg
     1801 gcatcgcttg gccgctccgc ggtcgatgcc gtcgcctcag cctgccacga cataaatatc
     1861 ctccccgcgc cgtatgacct cgaaactttt gagtctcaga cttcgatccg cggcgcattc
     1921 gcccgtcttg agatcgtatt cgtatccatg ccacgggcag acgaaatgga tttcgtcagc
     1981 ggaaaatttc tgtcccagcc agctgcggtc gggaccgatc acatcctcga ccttgtgcat
     2041 catgatgcct tcgcaggccg gcccaccctg atgcacgcac aggttttcat aagcgtaaaa
     2101 cttgccctgc caatggaaca cgccgatttc atgccccttg tgggtcacga tgcggcgctc
     2161 gccatcagga aattccgctg ccttggcaac aaacacttcc ggcattcgga aagtatgaca
     2221 ctgaacggca cgaggcggca acgaagcagg attcgcgaaa atcagaacca gacttgcggt
     2281 gatccgcatt gtgtcgccat gcgctctcga gcaatgtgcg ctcatcgcaa acgagaggcg
     2341 ccggggtgga ttcagccgca attctcgccg ccattgccgg ggcctttctg ctggcgggtt
     2401 tcgtcaaggg cgtgatcggt cttggcctgc cgacggtgtc gattggcttg cttggcctcg
     2461 tgatgacgcc ggcgcaggcc gccgcgatcc tcgtcgtccc gtcccttgtc acaaatgtct
     2521 ggcaggccgc ggtcggcggc gggctgctcg ccctgacgcg gcggctatgg ccgatgctgg
     2581 ccggaatttg tgtcgggacc gttgtcggtg tgatgctttt gccgcatgac gacagcggac
     2641 gggccacggt atggctcggc ctcgcgcttg tgatctacgc cgtatttggt ttggtgaaag
     2701 gtcatttcgt cgtgccgccg agcatggaaa tgtggctcgg cctgctgatg ggcgcggtga
     2761 ccggtgcaat aaccgtggcc acgggcattt tcgtgatacc cggaacgccc tatttgcatt
     2821 cgctgtcctt tgagcgggac aaacttgtgc aggccttggg gctgtcgttc accgtttcaa
     2881 cagtcacgct tgctgcggcg ctcgcctata cggggcattt aggaacgtcg ctggtcgggc
     2941 cttcgattgg cgcactcgct gccgcgcttg tcggaatgtg gctgggacaa ctcacacgcg
     3001 gcaagatcag ggaagaaacg ttccgggtgt ggttcttcat cggcctgctg ctgctcggcg
     3061 gccatctggc gctgcgcggg gtcttatgat cgattaggcg gcgttccatt cgatcggcag
     3121 gaccaatgcg atg
//
LOCUS       DATDHO010000384         2591 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_167006, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000384 DATDHO010000000
VERSION     DATDHO010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167006"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..660
                     /locus_tag="VIY07_07465"
     CDS             199..660
                     /locus_tag="VIY07_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY6381630.1"
                     /translation="MAKSPSSHPALSYTDDIAASWTDVVLLAGRIFLGWLFLAAGYGK
                     LGNISGTVAYFTNLGMSPPGFWAWFAGCAEVALGAALILGIATRYAAVATFVWVFVAT
                     AIAHRYWTYPPPAQAAQYNNFLKNIAIMGGALCAFVTGAGRYSIDAMLAKR"
     gene            complement(736..1038)
                     /locus_tag="VIY07_07470"
     CDS             complement(736..1038)
                     /locus_tag="VIY07_07470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381631.1"
                     /translation="MHRLLTGLVVLLCLAGTAHAERRTFVIANDADGYGIDRCLASGA
                     KCGAAVANAYCKMQAFAEAATFHKAESTDITNAVASDATGVCRGNNCAVVAIVCTR"
     gene            1356..>2591
                     /gene="cysS"
                     /locus_tag="VIY07_07475"
     CDS             1356..>2591
                     /gene="cysS"
                     /locus_tag="VIY07_07475"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012170312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEY6381632.1"
                     /translation="MELRLYDTLTREKRVFAPLDPSRVRMYVCGPTVYDFAHIGNARP
                     VIVFDVLFRLLRHIYGEAHVTYVRNVTDVDDKINARAAERGVSIRDLTEETYKYFKED
                     VAALGCLPPNVEPRATEHIDEMKTLIERLVKHGCAYVAADHVLFEVKKMQGYGKLSKR
                     SLDEMIAGARVEIAPFKRDPMDFVLWKPSRAGEPAWPSPAGIEVPGRPGWHIECSAMS
                     WKHLGETFDIHGGGIDLVCPHHENEIAQSRCAFHTPLMANFWMHNGFLQVEGDKMSKS
                     LGNFFTIRELLADWPGEVLRLNMLRTHYRQPLDWTVKGLEESQKILDDWHHLLADMEM
                     PTNEKSDAEVLNSLCDDLNTPNVLTRLHALASEIRGPASGPQAIQLKRTLKTSGILLG
                     LLGQKEADYLRSHPRSVVVN"
BASE COUNT          531 a          716 c          800 g          544 t
ORIGIN      
        1 gtgatctgga ccgccgagcg cggcaaggaa atgtgggccg cattgcgggg gacgtgaaca
       61 tcaaaggtgc tttcgctagt cgcgatttct ttccataaaa atcgttgatt tgcctcaggg
      121 acgtctggcg gttgacgccg ggctcaaggt aacattggtg caaaagaagt tgctcaatga
      181 cgcatggagg ggaagcgcat ggcaaaatca ccatcttcgc atccggctct ttcgtacacg
      241 gatgacattg ccgcgagttg gacagacgtc gttttgttgg ccggccggat attcttgggg
      301 tggctgtttc tggcggccgg ctatggaaaa cttgggaaca tatcggggac cgtcgcctat
      361 ttcacgaatc tggggatgtc cccgcccggt ttctgggcct ggtttgcggg ctgcgctgag
      421 gtggcactgg gcgccgctct gatcctgggt attgcgacgc gttacgcagc tgttgccacg
      481 ttcgtgtggg tgttcgtagc gactgccatt gcgcaccgct actggacgta ccccccgcct
      541 gcacaggctg cgcaatataa caatttcttg aaaaacatcg cgatcatggg cggtgcgctg
      601 tgcgccttcg tcacgggagc agggcgctac tcaatcgacg cgatgcttgc aaaacgatga
      661 gtgcgagcca gcgcggcgta gaacaaagcg tccggcccgc gccggacgct tcatatcggc
      721 aatgaacgtt cgcccttaac gcgtgcaaac gatcgcgaca acggcgcaat tgttgccgcg
      781 gcaaacgccc gtggcgtcac ttgcaacagc gtttgtgatg tcggtgctct cggccttgtg
      841 aaaggtcgcg gcttccgcga aagcctgcat cttgcaatag gcgttcgcga cggctgcgcc
      901 acactttgca cctgaggcga gacagcggtc tatgccgtat ccgtctgcat cgttggcgat
      961 gacgaaggtg cgtcgctcgg catgcgcggt gccggcgagg cacagcagaa cgacaagacc
     1021 ggtcagaagt ctgtgcattg gggagctcgg ggaattgttc ggcgcccggc gtcgcggcgc
     1081 caatgcccac aatgcccgca aaagcgttaa acgacgctta accctgtcga ccgccggcgg
     1141 tcatcaaatt tttcccgtat tttgcacgag ttccgcgacc accttgacgg cttgcatgcg
     1201 acaaatcatt gtgccgccat gaacggcctt aaccatatct gcggcatttg ccgggagatt
     1261 attcgctagc gctgtccgcg ctggtcacgg ccgtctttct caaagttgag atagcaggac
     1321 agcccggcca gcggggccga tgggtgtcat ttgctatgga actcaggctc tacgatacgc
     1381 tgacgcggga gaagcgggta ttcgcgccgc tcgacccttc acgcgtccgt atgtacgtgt
     1441 gcggaccgac cgtctacgac tttgcccaca tcggcaatgc gcgaccggtc atcgtgttcg
     1501 acgtgctgtt ccggttgctg cgccacatct atggcgaagc ccacgtcacg tatgttcgca
     1561 atgtcacgga tgtcgatgac aagatcaatg cgcgcgcggc ggagcgcggt gtttctatcc
     1621 gcgatctgac tgaagagaca tacaaatact tcaaggagga cgtggcggct ctcggatgtt
     1681 tgccgccgaa cgtcgagccg cgcgcgactg agcacatcga tgaaatgaaa acgctgatcg
     1741 agcggctggt caagcatggg tgtgcgtacg tcgcggcgga ccatgtgctc ttcgaagtca
     1801 agaaaatgca gggctacggg aagctctcga agagatcctt agacgaaatg attgccggtg
     1861 cgcgcgtgga aatcgcaccg ttcaagagag atccaatgga cttcgtgctg tggaagccat
     1921 ccagggcggg cgagccggca tggccgtccc ccgcgggcat cgaggttccg ggacggccgg
     1981 gctggcatat cgaatgctcg gcaatgtcgt ggaagcacct gggcgaaacg ttcgatattc
     2041 acggcggagg catcgatctg gtgtgtcccc accatgagaa tgaaattgcg caatcgcgct
     2101 gcgcctttca caccccgctg atggcgaatt tctggatgca caatggcttt ctgcaggtcg
     2161 aaggcgacaa gatgtcgaag agcctcggca acttcttcac cattcgcgaa ttgctggccg
     2221 actggccggg agaggtgctg cgcttgaaca tgctgcgcac gcactatcgc cagcccttgg
     2281 actggacggt gaagggtctc gaagagagcc agaagatttt ggatgattgg catcaccttc
     2341 tcgcggacat ggagatgccg accaatgaaa agtccgacgc agaggtacta aattcgcttt
     2401 gtgacgatct gaacacgccg aatgtattga cgcggctgca tgcgcttgcg agcgaaattc
     2461 gcggacccgc atccggaccg caagcgatcc agctcaaacg cacgctgaag acttcgggga
     2521 ttctcttggg cctgcttggc cagaaggaag ccgactactt gagaagtcat ccccgtagcg
     2581 tcgtcgtcaa t
//
LOCUS       DATDHO010000385         1702 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_461758, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000385 DATDHO010000000
VERSION     DATDHO010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1702
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_461758"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..812
                     /locus_tag="VIY07_07480"
     CDS             <1..812
                     /locus_tag="VIY07_07480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEY6381633.1"
                     /translation="FRALHQSGCFVIPNPWNVGSARYLQGLGFKALATTSAGYAHSIG
                     YSDGDVTRDMVLAHCREIAQATDVPVNADFEGGYADDPDEVAANVRLCIDTGVAGLSI
                     EDFTGNDADPLYDFDLAVRRVRAARNAIDKAGGDVVFTARTEGFIRNRPDLDETIRRL
                     KAFADAGADCLYSPGIRTPEQIAATVKAVSPKPINFLNSGAFGYTLDDLAALGVRRIS
                     VGGTLSRVAMHAFVQSSRQLAEGKFDSFAGIISNAELNKFFHEDLPSRSKT"
     gene            817..>1702
                     /locus_tag="VIY07_07485"
     CDS             817..>1702
                     /locus_tag="VIY07_07485"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381634.1"
                     /translation="MNSATATSSRLTEQRPFVLFWLARLASTMGYQMLALTIGWQIYE
                     LTNSALDLGLVGLIQFVPAVVLTLLIGHVADRYDRRLIVRAAHSVYAAAALMITAAFV
                     TGMLSRDLLFTAVFVIGCARAFELPTAHALAPTLVPQSLISRAVAAWTSANQAAVICG
                     PALGGLIYAVSPVLIGLACLIFFAASITLVSLVHAKGPAPSREQPTLASVLAGFHCIR
                     SRRRLLGVITLDLFVVILGRATALLPVYARDILAVGPIGLGLLRSAPAVGALIISIVL
                     ARFPIERHIGHKMFAVVGI"
BASE COUNT          291 a          534 c          503 g          374 t
ORIGIN      
        1 cgttccgtgc gttgcatcag agtggctgct ttgtcattcc caatccatgg aatgtcggca
       61 gcgcccgcta cctgcagggg ctcggcttca aggctttggc gacgacgagt gcgggttacg
      121 cccattcgat aggctattcc gatggcgacg tgacgcgcga catggtgctc gcgcattgcc
      181 gcgaaatcgc acaggcaacc gacgtgccgg tgaatgcgga ctttgaaggc ggctacgccg
      241 atgatccgga tgaggttgcg gccaacgttc gactctgtat cgacaccggc gtggcgggat
      301 tatccatcga agatttcacc ggcaacgatg ccgatccgct ttacgacttc gatctcgcgg
      361 tgaggcgtgt tcgcgcagca cgcaacgcaa tcgacaaggc cggcggcgac gtggtcttca
      421 cagcacgcac ggagggattc atcaggaatc gacccgacct ggacgaaact atccggcgcc
      481 tgaaagcctt cgccgatgcg ggggccgatt gcctgtattc gccgggaatc cgaacccccg
      541 agcagatcgc ggcgacggtc aaggcggtgt cgcccaagcc gatcaatttt ctcaacagcg
      601 gcgcgttcgg ctataccctc gacgacctcg ccgcgttagg cgtgcgtcgc atcagcgtcg
      661 gcggcacgct gtcacgtgtc gccatgcacg cgttcgtgca atcgagtcga caactggcgg
      721 aaggcaagtt cgacagtttt gccggcatca tatcgaacgc cgagctgaac aagttcttcc
      781 acgaagatct gccgagtcga tcaaaaactt gacagaatga actctgccac cgccacttcg
      841 tctcgcctga ccgaacagcg gccctttgtg ctgttctggc tggcaaggct cgcctcgacg
      901 atgggctatc agatgctggc cctcacgatc gggtggcaga tctatgagct taccaacagc
      961 gccttggacc tcgggcttgt cggccttatt caattcgtcc ccgctgtcgt gcttaccctt
     1021 ctgatcggtc atgttgcaga ccgatacgat cgcagattga tcgtacgcgc cgcgcacagc
     1081 gtctacgcag ccgccgcgct gatgatcacg gcggcatttg taacggggat gctcagccgt
     1141 gacctgctgt tcaccgccgt cttcgtcatc ggctgcgcac gcgcgttcga attgcccacg
     1201 gcgcatgcgc ttgcgccgac gcttgtgccg cagtcattga tctcgcgcgc ggttgctgca
     1261 tggacttcgg ccaatcaggc tgccgtgatt tgcggccctg cgcttggagg tctgatttac
     1321 gcagtaagcc cggtgctgat cggcctcgct tgcctgatct tcttcgccgc ttcgatcact
     1381 ttggtcagtc tggtgcacgc gaaaggaccg gcgccatccc gtgaacagcc cacattggcg
     1441 tcggtcctcg ccggcttcca ttgcatccgc agccgacgcc gattgctcgg ggtgattacc
     1501 ttggatcttt ttgtagtcat tctcggccgc gccaccgcgc tgctgccggt ctatgcccgg
     1561 gatatcctcg ccgttggacc gatcggtctc ggcctgttgc ggtcggcacc cgctgtcggc
     1621 gcactgatca tttcaatcgt gctggcccgc tttccgatcg agcggcatat cggccacaag
     1681 atgttcgccg tggtcggaat tt
//
LOCUS       DATDHO010000386         4184 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_18989, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000386 DATDHO010000000
VERSION     DATDHO010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4184)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4184)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4184
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_18989"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1074
                     /locus_tag="VIY07_07490"
     CDS             <1..1074
                     /locus_tag="VIY07_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007692229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6381635.1"
                     /translation="VAIRAQGGVALPNGDRVMPDPILVGRNAEKVAALARRYGIERST
                     TDLDAALKNQDDTVFFDAATTQMRADLLTRAIEAGKHVYCEKPVADALDKAIAVAKLA
                     KAKKVKNGVVQDKLFLPGLRKIRMLRDSGFFGRMFAVRGEFGYWVFEGDWGQPAQRPS
                     WNYKKSEGGGIVLDMLCHWRYVFDNLFGKVQAVTCLGATHIPKRVDENGKAYDADADD
                     AAYATFRLENGVIAHMNSSWCVRVRRDDLVTFQVDGTHGSAVAGLTRCWTQHRVNTPR
                     PVWNPDVPQTTDFQSQWEEVPENIVYENGFKLQWEDFIRHVAADTPWHHGIIEGVKGV
                     QLAELGLQSWKERRWIDVPDLKL"
     gene            1084..2250
                     /locus_tag="VIY07_07495"
     CDS             1084..2250
                     /locus_tag="VIY07_07495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017989906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEY6381636.1"
                     /translation="MTTLVLPTTDRKLEPYTTGEPIIFPSKEATKNFNRIAFAAAHVV
                     ADPLADTNPWLDTAIDWEKTVHFRHYLWDLGLGVAEAMDTAQRGGGLDWAAAQEQIRH
                     TLEAAKGRPGVKVCCGIGTDHLDPGPEVRIDDIIRAYEEQIETIEAMGGRLVVMASRA
                     LAAAAKSPDDYARVYRRILRQVREPVIIHWLGEMFDPALAGYWGSADHAAAMESCLGI
                     IHDSATKIDGVKISLLSKEKEIEMRRKLPAGVRMYTGDDFNYAELIAGDDQGYSDALL
                     GIFDAIAPAASAGLARLSAGDLQGFHGVLEPTVPLSRHIFQAPTRFYKTGVVFLAWLN
                     GLQDHFIMVGGQESARSLLHLAELFRLADKARVLHDPELAAARMNKLLTVHGVA"
     gene            2247..3071
                     /locus_tag="VIY07_07500"
     CDS             2247..3071
                     /locus_tag="VIY07_07500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007537788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase family
                     protein"
                     /protein_id="HEY6381637.1"
                     /translation="MNTDGLSINLATVRQQWNLREAVEACARHGIKAVDPWRDQVAAL
                     GLEESVRVIRANGMRVTGYCRGGMFPAADEAGRRAAIDDNKRALDEAAALGAECLVLV
                     AGGLPKGSRDIGSAREMIQEGLAAILPHARACDVPLAIEPLHPMYAGDRSCVNTLAQA
                     LDLCDVLGAGTGVAIDAYHVWWDPDLAAQIARAGANNRILAYHICDWLVPTRDLLLDR
                     GMMGDGVIELPRIRELVHHAGYRGLTEVEIFSAENWWKKPGDDVLRTCIERFNTAS"
     gene            complement(3118..3918)
                     /locus_tag="VIY07_07505"
     CDS             complement(3118..3918)
                     /locus_tag="VIY07_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6381638.1"
                     /translation="MTGRLQNRIAIVTGAGCVGPGWGNGRAIAVRFAEEGARIFAVDR
                     DLDSVRETIGRVKAVGGEIVTHQCDVTGAASVEAMVKTCLDRFGRIDILINNVGGSAH
                     GGPVEMSEDAWDAQVDHNLKSVFLTLKYVLPVMERQKSGAVVNIASTSGLRWTGAAQV
                     AYAATKAGVIQLSRVVAVQYADKGIRVNTVVPGQLHTPMVEARLAGQRAGGDVEALLK
                     SRLERIPIGFMGDGRDTANAALFLASDEARFVTGTEIVVDGGMTARCD"
     gene            complement(3915..>4184)
                     /locus_tag="VIY07_07510"
     CDS             complement(3915..>4184)
                     /locus_tag="VIY07_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6381639.1"
                     /translation="PERMSIAGAPYDDVVPFAKTLVEKFPDRVIWGTDWPHPNHPGPV
                     PDDGVLVDILTEIAPSDAARQAILVDNPQRFYRFAPARRLMSESS"
BASE COUNT          809 a         1263 c         1316 g          796 t
ORIGIN      
        1 gtggcgatcc gggctcaagg cggcgtcgcg ttgccaaacg gcgaccgcgt gatgcccgat
       61 ccgattttgg tcggccgcaa tgccgaaaaa gttgcggcgc tggcgcgccg ctacggaatc
      121 gaacgctcca ccaccgatct cgacgcggcg ttgaaaaatc aggatgacac agtgttcttc
      181 gatgcggcga caacccagat gcgcgccgat ctgctcaccc gcgcaatcga agccggcaag
      241 catgtctatt gcgagaagcc ggtagccgac gctctcgaca aggcgattgc cgtagcaaag
      301 ctcgctaaag cgaagaaagt caaaaatggt gttgtgcagg acaagttatt tctgcccggc
      361 ctgcgtaaga tcaggatgtt gcgtgattcc ggcttcttcg ggcggatgtt cgcggttcgc
      421 ggagaattcg gctactgggt gttcgaaggc gactggggcc agccggccca gcggccaagc
      481 tggaactaca agaaatcgga aggcggcggc atcgttctcg atatgctctg ccactggcgc
      541 tatgtcttcg ataatctttt cggcaaagtg caggcagtga cctgtctcgg cgccacacac
      601 attccgaagc gagtggacga gaacggaaaa gcttacgatg ccgatgcgga cgatgcggct
      661 tatgcgacct tcaggcttga gaacggcgtg atcgcgcaca tgaattcgtc ctggtgcgta
      721 cgcgtgcgcc gcgacgacct ggtcacgttc caggtcgatg gtacccatgg ctcggcggtg
      781 gccggcttga ccaggtgctg gacgcagcat cgggtcaaca cgccgcggcc ggtctggaat
      841 cccgacgttc cgcaaacgac ggatttccag tcgcaatggg aggaggtgcc ggaaaatatc
      901 gtctacgaga acggcttcaa attgcagtgg gaggatttca ttcgccacgt ggccgcggat
      961 acgccctggc accacggaat tatcgagggc gtcaaaggtg ttcagctcgc tgaacttggc
     1021 ttgcaaagct ggaaagagcg acgctggatc gacgtgcccg acctcaagct ataggagcga
     1081 ggcgtgacca cgcttgtcct gcctacaacc gatcgcaaac ttgagcctta tacgacgggc
     1141 gagccgatca tttttccttc caaggaggcg accaaaaatt tcaaccgcat cgcgtttgcg
     1201 gccgcgcacg tcgtagcgga tccactggcc gataccaatc cctggctcga cactgcgatc
     1261 gattgggaga agaccgtcca ttttcggcac tatctttggg atttgggcct cggcgttgcc
     1321 gaagcaatgg atacagcaca gcggggtggc gggctcgatt gggcggctgc acaagagcag
     1381 atacgccaca cccttgaagc tgcaaagggt cgtccgggcg tgaaggtctg ctgcgggatc
     1441 ggcaccgacc atctcgatcc gggtccagag gtccgtatcg acgacatcat tcgcgcctac
     1501 gaagagcaga tcgagacaat cgaagcgatg ggtggccggc ttgtggtgat ggccagccgc
     1561 gcgcttgcgg cggcggcaaa aagccccgac gactatgcga gggtctacag acgcatcctg
     1621 cgccaggtgc gagagccggt catcattcat tggctcgggg agatgtttga tccggcgctt
     1681 gccggctact ggggctctgc cgatcacgcg gcagccatgg agagctgtct cggcatcatt
     1741 cacgatagcg cgacgaagat cgacggggtg aagatatcgc tgctctcgaa agagaaggaa
     1801 atcgagatgc gccggaaatt gcctgccggc gtgcgaatgt ataccggcga cgacttcaac
     1861 tatgccgagc tgatcgccgg cgacgatcag ggttattcgg atgcgctctt gggcattttc
     1921 gacgccatcg cgcctgccgc atcggcgggg ctcgcgcggc tgtcagccgg tgacctgcag
     1981 ggcttccacg gagttttgga gccgacggtg cccttgtccc gacacatctt tcaggcaccg
     2041 acgcgtttct acaagacggg agtcgtgttc cttgcctggc tcaacggctt gcaggaccat
     2101 ttcatcatgg tcggcgggca ggaaagcgct cgctcgctgc tgcatcttgc cgagctattt
     2161 cgtctcgccg acaaggcgcg cgtactgcac gatccggaat tggccgcggc ccgcatgaac
     2221 aagctgctga cggtgcatgg agtggcatga acaccgacgg tctgtcgatc aatcttgcga
     2281 ccgtgcgtca gcagtggaat ctgcgcgaag ctgtcgaggc ttgcgcacgc catggcatca
     2341 aggctgtcga tccgtggcgc gatcaggttg ccgcactcgg actagaggaa tcggttcggg
     2401 ttatcagagc gaatggaatg cgcgtcacgg gctactgccg gggcggcatg tttcctgcag
     2461 ccgacgaggc aggccggcgc gcggcgatcg acgacaacaa acgcgccctc gatgaggcgg
     2521 cggcattggg cgcggaatgc ctggttctcg ttgcgggcgg cttgcccaag ggctcgcggg
     2581 acatcggatc cgcgcgtgag atgatacagg aggggttggc tgcgatccta ccgcacgctc
     2641 gggcgtgcga cgtgccgctc gccatcgagc cacttcaccc gatgtatgcc ggcgaccgct
     2701 cctgcgttaa cacgctcgct caggcgctgg atctctgcga tgttctgggc gcgggcaccg
     2761 gtgttgccat cgatgcgtac cacgtctggt gggatcccga tctcgcggcg cagattgcac
     2821 gtgccggagc caacaaccgc atcctggcct accacatttg cgactggttg gtgccgacgc
     2881 gcgatttgct gctcgatcgc ggcatgatgg gtgacggtgt cattgagttg ccgcgcatcc
     2941 gggaactggt gcatcacgcc ggctaccgcg gcctgaccga ggtcgaaatt ttctccgccg
     3001 agaactggtg gaagaagccc ggcgacgacg tcctgcgcac ctgcatcgag cggttcaaca
     3061 cggcttctta aatagagcac tcatgcctgc cttgtgcggg catcccgtaa agccgctcta
     3121 atcgcagcgc gctgtcattc caccatccac cacgatttcc gtgccggtga cgaagcgcgc
     3181 ctcatcagag gcaagaaaca gggcggcgtt agctgtatcg cggccatcgc ccatgaatcc
     3241 gatcgggatt cgctcgagcc ggcttttgag cagcgcttcc acatcgccgc cggcgcgctg
     3301 gcccgcaagc cgcgcctcga ccatcggcgt atgcagttgt ccagggacga ccgtattcac
     3361 gcgtataccc ttgtccgcgt attgcacggc cacgacgcgc gataactgga tcacgccagc
     3421 cttggtcgcg gcataggcga cctgcgctgc gccggtccaa cgaagcccgg aggtcgatgc
     3481 gatattaacg acagcgccgc tcttttggcg ttccatcacc ggcaggacgt acttcaacgt
     3541 caggaagacg ctcttcaggt tgtgatcgac ctgcgcatcc caggcatctt cgctcatttc
     3601 gaccggtccg ccgtgagccg agccgccgac attgttgatc aatatgtcga tgcgtccgaa
     3661 acgatcgaga catgtcttca ccatcgcctc gacggatgcc gcgccggtaa cgtcacattg
     3721 atgcgtgaca atctcaccac ccaccgcctt gacgcgaccg atggtctccc tgacggagtc
     3781 gagatcgcgg tcgaccgcga aaatcctggc gccttcctcg gcgaaacgca cggcgatagc
     3841 gcgcccgttg ccccagccgg ggccgacgca gccggcgccg gtcacgattg caatccgatt
     3901 ctgcaggcgg ccggtcacga tgactcgctc atcaggcgcc gcgccggcgc gaaacgatag
     3961 aaacgttgcg gattgtccac caggattgcc tgccgcgcgg cgtcactcgg cgcgatttcc
     4021 gtgaggatat cgaccagaac gccatcgtct ggaaccggcc ctggatgatt gggatgcggc
     4081 caatcggtgc cccagatcac ccggtcggga aacttctcga ccagggtctt ggcgaacggc
     4141 acgacgtcgt catagggcgc cccggcgatg gacatccgct ccgg
//
LOCUS       DATDHO010000387         1731 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_118425, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000387 DATDHO010000000
VERSION     DATDHO010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118425"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1252
                     /locus_tag="VIY07_07515"
     CDS             <1..1252
                     /locus_tag="VIY07_07515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381640.1"
                     /translation="QMRREVTMPNQKNSLSRRQVLATTALGVAAAASGSIAMPSVLRA
                     QGAPVKLGVLHPVTGALSYSGQQGRLGATMAIEEINAAGGIKGLGQIDPVLGDAQSTP
                     DGGTAEVEKMNSANVVCIVGGYASNICLATTQAAARYELPYVVDVGVADGIVTRSLKN
                     TFRFGPGFGVISKTALTNLAAINDQAGKPAKTVMIVHEDSLFGSGLAKLLNAQLPQQG
                     FEILETIPHPTPTRDFNNVVLKIKAQNPDLVIPANYYNEYVLLARTMQQQQVKTKGIY
                     SVLGGAASSYKFVKEFPEAARYIMDCNHWFDPRNDKALALKKKVEAKDQFYTYEVYMN
                     YSCIYLVADALERAGAADRAKLTDALASSTFSGHLMPYGPTKFVNGQNEGAAPVNTQV
                     LDNDIKVILPATFANAKPVFPRPA"
     gene            1323..>1731
                     /locus_tag="VIY07_07520"
     CDS             1323..>1731
                     /locus_tag="VIY07_07520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381641.1"
                     /translation="MLSSVILIPAVLNGLLIGAIYALVALGLTLIYGVLHIINFAHGA
                     LLSAALFAAFFSFRLLGLDPYVAVFLLAPIFFVIGYALQRFIIGPASHGDDRNMLLVT
                     LGIAVVVENVLLYSFRADTRTIDVPYAFQTIDVG"
BASE COUNT          348 a          536 c          486 g          361 t
ORIGIN      
        1 ccaaatgagg agggaagtta ccatgccgaa ccagaaaaat tcgctcagcc gccgccaggt
       61 gctcgcgacg acggcactgg gcgtcgcggc tgcggcaagc ggcagcattg cgatgccttc
      121 cgtgctgcgc gcgcaaggtg cacctgtgaa actcggcgtg ctgcatccgg tcaccggcgc
      181 gctgtcttat tccggccagc agggccgtct cggcgcgacc atggcgatcg aggagatcaa
      241 cgctgccggc ggcatcaagg gcttgggcca gatcgaccca gtacttggcg acgcgcaatc
      301 gaccccggac ggcggaaccg ccgaggtcga gaaaatgaac tcggctaacg tggtctgcat
      361 tgtcggcggc tacgccagca acatctgtct cgccaccacg caggcggcgg cgcgctacga
      421 gttgccttat gtcgtcgatg tcggtgttgc cgacggaatc gtgacgcgaa gtctgaaaaa
      481 caccttccgt tttggaccgg gcttcggcgt catttccaag accgctctga ccaatctcgc
      541 ggccatcaac gatcaggcag gcaagcccgc caagactgtg atgatcgtgc acgaagattc
      601 gttgtttggc tccggcctcg ccaagctgct caacgcgcag ctcccacagc agggtttcga
      661 aatcctcgag acgatcccgc atccgacgcc aacccgcgac ttcaacaacg tcgtgctcaa
      721 gatcaaggcg cagaacccgg atctcgtcat cccggccaac tactacaatg agtatgtcct
      781 gcttgcccgc accatgcagc agcaacaggt gaaaacgaaa ggcatctatt cggtgcttgg
      841 cggcgccgcc tcgtcctaca agttcgtcaa ggaattcccc gaagcagcca gatacatcat
      901 ggactgcaat cactggttcg atccgcgcaa tgacaaggcg ctcgcgctga agaagaaggt
      961 cgaagcgaag gaccagttct atacgtacga agtttacatg aattacagct gcatctacct
     1021 ggtcgccgac gcgctcgagc gtgccggcgc tgcggatcgc gccaagttga ctgatgcgct
     1081 ggcaagttcg accttttcgg gccacctgat gccttacgga ccgaccaagt tcgtcaatgg
     1141 ccagaatgag ggtgctgcgc cggtcaatac gcaggtactt gacaacgaca tcaaggtcat
     1201 actgcccgcc acgttcgcga acgcgaagcc agtgttcccg cggccggctt aagcgtacat
     1261 aggtcgcgag cgacgcatcc aacggcgccg ctcgcgaccg taactttcaa agcattgcgc
     1321 ccgtgctctc gtccgtcatc ctgattccag cggtcctcaa tggactgctg atcggcgcaa
     1381 tctatgcact cgttgcattg gggctcacgc tgatctacgg cgtgctgcac atcatcaatt
     1441 tcgcgcacgg cgcgttgttg agcgccgcac tatttgccgc ttttttttcc tttcgactgc
     1501 ttggccttga tccatacgtt gctgtgtttc tgcttgcgcc gattttcttt gtgattggct
     1561 atgccttgca gcgattcatc atcggcccgg cttcgcatgg cgacgaccgc aacatgctgc
     1621 tggtgaccct cgggatcgcc gttgtcgttg aaaacgtgct tctctattca ttccgggccg
     1681 atacccggac catcgatgtg ccgtacgcgt tccagacgat cgacgttgga t
//
LOCUS       DATDHO010000388         2362 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_267123, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000388 DATDHO010000000
VERSION     DATDHO010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2362)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2362)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2362
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267123"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..666)
                     /locus_tag="VIY07_07525"
                     /pseudo
     CDS             complement(22..666)
                     /locus_tag="VIY07_07525"
                     /inference="COORDINATES: protein motif:HMM:NF014425.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
     gene            complement(700..843)
                     /locus_tag="VIY07_07530"
     CDS             complement(700..843)
                     /locus_tag="VIY07_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381642.1"
                     /translation="MVELTHTVTRDKTESSLIVIAGIFVLKTLVRLAGLATSNVDLFT
                     DEA"
     gene            883..1335
                     /locus_tag="VIY07_07535"
     CDS             883..1335
                     /locus_tag="VIY07_07535"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEY6381643.1"
                     /translation="MTEILFYQLQGQKLEGVLPPLLEKSLERGWKVVVQGSSEERLEA
                     LDAHLWTYRDDGFLPHGTWRDPEASSQPVLFTINESNPNGAVVRFLIDGAPMPADPET
                     YQRIVLLFDADDAEAVAAARDHWSAAKQRGLETTYWQADERGRWAKKA"
     gene            1807..2181
                     /locus_tag="VIY07_07540"
     CDS             1807..2181
                     /locus_tag="VIY07_07540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381644.1"
                     /translation="MAGDLAGAPMPGATPASVGSGPGLQRLEPAPVPLTSGGIALGMT
                     ECQTVQRAGTPSNVAISTGEKGERKVVLTYLSGPWPGIYTFAGGRLNVVERAPEQPKP
                     EKKKTPKKKPANTAQSGRNYVQ"
BASE COUNT          573 a          656 c          728 g          405 t
ORIGIN      
        1 cttcccaaga ccggacccgg gctattgcaa gcaagaaggc cgtgaaaacg acaggaccaa
       61 agacggcgaa ctgggcggcc agaactcgag cgccgcgagc ggatgcagtc gaggtccgct
      121 gtcggtttgc acaacggcgg cgacgttctt gaaggtgacg aagtcgtggt gcaacaccca
      181 gatgagattt ggtgcagcaa taaccagggc aattccaagc gccagccaga cgaggcgatt
      241 tctgagcagg tctcgcgcgc tgcggtcaaa cactgccgca agcaacatgc cgagcacgaa
      301 atatcccatg gcgtacttgg caagcagacc gaggccgatc gacgcgccga gtgtcacggc
      361 ccacggccat gacgcccgtt cgagcagatt gacataggcc caaagcgcca gcgcccagaa
      421 aaacaggagc ggcacatcgg ttgagataat ccgagaagaa aattcgagcg cgatcccgaa
      481 catcatcagg agcgcagccc ataacccgac gaccgagcca taaagtttgc ggccgatcag
      541 gtaaatgacg acacaggttc caaagtagaa aattggcgaa ggtgctcgga cgcacgcttc
      601 actgctgccg cacactgact cggcaacgtg gatgatccat gcgatgaggg gtggcttgga
      661 gaagtaaccc cagctgagct cgcgagacca actccagtat taggcctcgt ccgtgaacag
      721 atccacgttg gacgttgcaa ggccggcaag ccggacaagg gttttgagga cgaaaatacc
      781 ggcgatgaca atcaggctgg actcggtttt gtcgcgcgtc acagtatgtg taagttccac
      841 cactgacggc tcagataccc gatcgctagc acgcgctcat aaatgacaga aatcctgttt
      901 tatcaactcc agggccaaaa attggaaggc gttcttcccc cgttgcttga gaaatcgctg
      961 gagcgcgggt ggaaagtggt cgtgcagggg tcatcggagg agcggctcga ggcattggac
     1021 gcgcatttgt ggacctatcg tgatgatggt tttctgccac atgggacatg gagagatcct
     1081 gaagcatcca gccagccggt ccttttcaca atcaacgaaa gcaacccgaa tggggcggtc
     1141 gtacgcttcc tgattgacgg tgcgccgatg cctgccgacc ccgagaccta tcagcgcatc
     1201 gtacttttgt tcgatgcaga cgacgctgag gcggtggcgg ccgcccgcga ccactggtca
     1261 gcagctaagc aaaggggact ggaaacgact tattggcaag cagacgaacg aggacgttgg
     1321 gcaaaaaagg cgtgagccaa gagcccccgt caatggctta ctcggtcgct gcacgataag
     1381 ccaatgaccc actgaggtaa tccattggac gacagaacga ccgaatcttg cgacgcgcca
     1441 tcgtcatgac gcaaaatatg ttttaggaga tagacgaaaa ccaggacatc cgttttgccg
     1501 cgccatcgcg tccaactcac aattgcgctt gcttgcaccg cagccttggg cttgggcggc
     1561 tgtaccaagg gattcgaaga tcaaaatgat ggcggctggt tttcgcggcc tgcctttacc
     1621 aaaccagatt gggcgaagcc gggcacgggg aagataaacc ttagtctcat ggggccggta
     1681 aacgcggaag atttggtaag caccgagggg caatgcgcag cgccagctgc tgtgggcgta
     1741 caaaccgccg aagcatcgcc gtcaaccaac gaaccgcctt agccggcgga ccgggctgtc
     1801 gggtcggtgg cgggcgatct tgcgggcgca cccatgccgg gggcgacgcc tgcgtccgtg
     1861 ggcagcggtc cgggcctgca acgactggag ccggcccctg tgccgctgac gagcggcggc
     1921 attgcgcttg ggatgaccga gtgccagacg gtccaacgcg cagggacccc gagcaatgtt
     1981 gcgatcagta caggcgagaa gggcgaacgc aaagtcgtgc tcacctatct gagcggaccc
     2041 tggccaggga tctacacctt tgcgggagga cgtctgaacg tcgtcgaacg ggcacccgag
     2101 cagccgaaac cggaaaagaa aaagactccc aagaaaaagc cggcgaatac ggcccaatca
     2161 ggtcgcaact acgtccagta atccgtcagg tgatcttgcg cagtgcgccg ccgccggttt
     2221 cacgctgata gatgatcagg tcgaagctgg gtgtcagctc gttgcccgaa atggcgctta
     2281 gaagtgcatg cgcctggccg cgatggtggg tttggtgatt gaaaaaatga tcaagccccg
     2341 gagcaagcgg ctgctcgata tc
//
LOCUS       DATDHO010000389         3168 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_365242, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000389 DATDHO010000000
VERSION     DATDHO010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3168
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_365242"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..959
                     /locus_tag="VIY07_07545"
     CDS             <1..959
                     /locus_tag="VIY07_07545"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEY6381645.1"
                     /translation="SDVLLDILYCGVCHTDIHYIRNDWGASRYPCIPGHEIVGRVEAV
                     GKGVTKFKVGDIAGVGTMVDSCRTCENCLANREQNCLNAVTFTYNSPDRVSGGHTFGG
                     YSDKIVVTEHFVIRIPPDADLAATAPLLCAGITTFSPMQHWKLTSGQRVSVIGLGGLG
                     HVAVKLAVARKAEVTVFTTTPGKVADAQRLGAQEALLWSDTAAMKRLANHFNLMISTV
                     PTAYPMQPFVDLLKLDGTLVNVGAMEDLQSVSGRSLIFGRKSIAGSVVGGIAETQELI
                     DYCTARNIKADIELIRPTEINRAYERVVDKDARYRFVVDMTH"
     gene            1089..1475
                     /locus_tag="VIY07_07550"
                     /pseudo
     CDS             1089..1475
                     /locus_tag="VIY07_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002972037.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
     gene            1479..2204
                     /locus_tag="VIY07_07555"
     CDS             1479..2204
                     /locus_tag="VIY07_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY6381646.1"
                     /translation="MTNTRKSDAFPAMLTLDDVRVVAPALERYTEGTLGDLWKRPGLS
                     LRDRSLITVAVLISRNQRTELPSHLNLALDNGVKASEISEVITHLAFYSGWASAMSAV
                     AVAKDVFRARGIGADQLPSASGPLLPIDEASEARRVAFVEQSVGPVAPGVVQYTTDPL
                     FHDLWLRPALAPRDRSLVTVTALVATGQVAQLSAHLNRAMDNGLTRAEASEALTHLLF
                     YAGWPNVFSAVPVAKDVFEKRPE"
     gene            2185..>3168
                     /locus_tag="VIY07_07560"
     CDS             2185..>3168
                     /locus_tag="VIY07_07560"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015241445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY6381647.1"
                     /translation="MRNVPNSRLEAPESSSVDAALAGAERKGFRLAVIGRTCALVVIG
                     CFYLTALRYPNNIYVATLILTSAALGLAPLGLVGRRYERIGRYALFAFDAAVISAILA
                     LAPLSSGGDVPQNLVFLSSRPEHYFVLVAISILALSPALVLWTGLCAVVGLAGAAAWI
                     MAGMERIVSLGDLPPSYSREDYLAVVLNPDFLGIPFRVSEGVVLALVTCIAALAVHRA
                     RNVVRAHAAAEAEQARIRQIFGRYVPALVAEQLIHAGQLVPQQREASIIFADIEGFTH
                     LAESLPPSQVIGLLNIFFSAVTAIVDERGGIVVNHVGDALIAAFNAPLPIDA"
BASE COUNT          620 a          919 c          946 g          683 t
ORIGIN      
        1 caagcgatgt gttgcttgat atcctatatt gcggggtatg ccacaccgat atccattata
       61 ttcgcaacga ttggggtgcg agcaggtatc catgcattcc tggtcacgaa atcgtggggc
      121 gtgtggaggc ggtgggcaaa ggggttacga agttcaaggt gggagatatt gccggggtcg
      181 gtacaatggt tgactcgtgc cgcacatgcg agaactgcct ggcgaatcgc gagcagaact
      241 gcctgaacgc cgtcaccttt acttacaact cgccggaccg cgtgtctgga ggccacactt
      301 tcggtggcta ttccgacaag attgtcgtca ctgagcactt cgtgatccgc atcccgccgg
      361 acgcggatct cgcggcaaca gccccgctgt tatgcgcggg gattacgacc ttctcgccga
      421 tgcagcactg gaagctaacg agcggtcagc gcgtgagcgt catcggtctg ggtggcttgg
      481 gccatgtagc tgtcaaactg gcagtagcgc gcaaagccga agtcaccgtg ttcacaacca
      541 ccccaggaaa ggttgccgat gcgcagcggc tcggagcgca ggaagcgttg ctgtggagcg
      601 acaccgcggc gatgaagcgg ctcgccaatc acttcaatct gatgatctcc acagttccca
      661 cagcataccc gatgcaacct ttcgttgacc ttctcaagct cgatgggact ctggtcaatg
      721 ttggtgccat ggaagacctt cagagcgtga gcggcaggag tttgatattt gggcgaaaga
      781 gcatcgcagg ctcagtggtg ggcggcattg ccgaaactca ggaacttatc gactactgca
      841 cggcccgaaa cattaaagct gacatcgaac tgatccgacc aaccgagatc aaccgagcgt
      901 acgagcgggt cgtggacaaa gacgcgcgct atcgcttcgt cgtcgatatg actcactagg
      961 gaaggaataa aatgaaaccg ttcgcgctga cgctcatatc cctttttcta tttgctccgg
     1021 catgcgccgg tatcaataag gccaaaatta ggtcgacccc catcgccgcg agcaagcagg
     1081 cgcagataat ggaaattacg cgcagcggct ctcaacagtc tcggcaggcg ccggccgagt
     1141 attttactgg ttcggtgcgc atcgatcctt tgttccaagc gaaagaccca tcgcgcacgt
     1201 cagcctccta tgtcaccttc gagcccgctg cccgctctgc atggcatatg catccgctcg
     1261 gtcagatcct gatcgtcaca gctgggactg ggtgggtgca gcaagagggt ggtgaaaagc
     1321 aagagatcaa gccgggcgat gccatatgga cacccccggg cgtgaagcat tggcatggcg
     1381 ctacccccgc caccactatg acgcacatcg ccattcaggg atccgtggac agtaagaacg
     1441 ttgattggat ggaaaaggtt agcgaggagg aatacaaaat gacgaacacg cgcaaatcgg
     1501 atgctttccc ggcaatgctg acgcttgatg atgttcgggt agtcgcgccg gcgctcgagc
     1561 gatacacgga aggcactctt ggcgatctgt ggaagcgccc tgggttatcg ctgcgagatc
     1621 gtagtctcat taccgtcgcg gtcctgatct cgcgcaatca gaggacggag ttaccgtcgc
     1681 atctcaacct ggcactggat aacggcgtca aagcgagcga gatctccgag gtcatcacgc
     1741 atctcgcgtt ttactccggc tgggcgagcg cgatgtcggc ggttgcagtc gcgaaagatg
     1801 tctttagggc gcgtggaatc ggagccgatc agcttccatc ggcgtcaggc ccgcttcttc
     1861 ccatcgacga ggcttcagag gcgcgacgag tggcctttgt cgagcaaagt gtcggaccgg
     1921 tcgctcccgg agtcgtgcag tacaccactg acccgttgtt tcatgatctg tggctgcgcc
     1981 cggcgctcgc gccgagggat cggagcctcg ttactgtcac tgctctcgtc gcaacaggac
     2041 aggtggcaca actgtcggct cacctcaaca gggcaatgga taacggcctg acgagagctg
     2101 aagcgtcgga ggcgctcaca cacctgctct tttacgccgg ttggccgaac gttttttccg
     2161 cagtaccggt ggcgaaggat gtctttgaga aacgtcccga atagcaggct ggaggcgcca
     2221 gagtcgtcct cggtcgacgc cgccctcgct ggcgctgaac gcaaaggatt tcgcctggcc
     2281 gtgatcggcc ggacctgtgc ccttgttgtg atcggctgtt tttatctgac agccttgcgc
     2341 tatccgaaca acatctacgt agcaacgctg atcctgacga gcgctgcact tggccttgcg
     2401 ccactcgggt tggtcggccg ccgctatgag cgcatcggac gctacgctct tttcgccttc
     2461 gatgcggcgg ttatcagtgc catacttgct ctcgcgccgc tgagcagcgg cggcgatgtt
     2521 cctcagaacc tggtctttct ctccagccgc cctgaacact acttcgtact cgtagcgatc
     2581 tccattttgg cgctatcgcc tgctctcgtc ctctggactg gcctttgcgc cgtggtcggt
     2641 ctcgccggtg ccgcggcctg gatcatggcc ggtatggagc gcatcgtcag cctcggagat
     2701 ctgccgccgt cgtattcgcg cgaagattat ctcgcggtcg tgctcaatcc tgacttcctc
     2761 ggcattccct tccgcgtaag cgagggggta gtgcttgcac tggtgacgtg catcgcggcg
     2821 ctggccgttc atcgcgcacg caacgtggtc cgggcccatg cagccgccga ggccgagcaa
     2881 gcccgtatcc ggcaaatttt tggccgctat gtcccggcgc tggtggccga gcaactcatc
     2941 catgcgggac agcttgtgcc tcagcagcgc gaggcgagca tcatctttgc cgatattgaa
     3001 gggttcacac atctggcaga atccttgcca ccctctcaag tgatcgggct cctcaacatt
     3061 tttttcagcg cggtgacggc gatcgtcgat gagcggggtg ggatcgtcgt gaaccatgtc
     3121 ggcgatgcgt tgatcgcggc gtttaatgcg cctcttccta tcgacgcg
//
LOCUS       DATDHO010000390         2284 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_167607, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000390 DATDHO010000000
VERSION     DATDHO010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2284
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167607"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1059
                     /locus_tag="VIY07_07565"
     CDS             <1..1059
                     /locus_tag="VIY07_07565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY6381648.1"
                     /translation="RVRPPDNPAFCKKGSNHPSAKVFPLERATRHLSMYDPKTKQFTL
                     ISTCFATHHLVFAEDVDHTLWTSAGGAGQGAIGWLNRKMFEDTGDEEKSQGWAPFILD
                     TNGNGKRDEWVEPNEPVDAAKDKRVVIGYYGVAVNPVDGSVWGTSLGFPGYVTRFDPG
                     PNPTETGLTEIYEAPVEMNGYGVRGMDIDRNGVAWVSLSSGHLGSFDRRKCKVINGPT
                     ATGKHCPEGWTLYQLPGPQFQNLTEPGSIESSYYTWVDQFDTFGLGRDVPIATGNLND
                     ALLALVDGKFVVLRVPYPLGFYTKWMDGRIDDPKAGWKGKGLWATHGTRAPFHLEGGK
                     GTKPKVVKFQLRPDPLAK"
     gene            1140..>2284
                     /locus_tag="VIY07_07570"
     CDS             1140..>2284
                     /locus_tag="VIY07_07570"
                     /inference="COORDINATES: protein motif:HMM:NF014795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HEY6381649.1"
                     /translation="MPKITLKNVTVSDAYMTLLADRGIDYWFANAGTDFAPVVETLAK
                     AEILETKVPKPVTCPHENTAMHMAIGYFLVTGKPQAVMVHVNVGTANGMNGLLNAARG
                     HVPVLFTAGRTPTNEDGLAGHRSLDIHWTQEMFDQAGMLRESVKWDYELRNGLQLETV
                     VDRALTIAKSEPMGPVYLSLPREVLAQTMAEFTYTTPSRQHAAAPAFPNGEAVEQLAA
                     LLAAAENPLIITSSAGRDPRAWSALADFAQRYAIPVIQYRNRYMSIPSNHPMNLGYEL
                     SPLLENADVILAIDVPVPWLPAYDKVRDDAKVIHMGPDPLHGYVPVRGHPCDIALACA
                     TAEGLRVLNESMAQHEGKAKMRIDKRRAALAEQWRTLRENWRKKLESV"
BASE COUNT          517 a          655 c          675 g          437 t
ORIGIN      
        1 cgagtgcggc cgccggataa tccagccttc tgcaagaaag gctcgaacca tccatcggcc
       61 aaagtctttc cgctcgaaag ggctacccgc cacctctcca tgtacgatcc taaaactaag
      121 cagttcaccc tgatcagcac ctgtttcgcc acgcaccatt tggtgtttgc ggaggatgtt
      181 gatcataccc tctggacgag tgccggcggc gccggccagg gtgccatcgg ctggctaaat
      241 cgcaagatgt tcgaggacac cggcgacgaa gaaaaatcac aagggtgggc gccgttcatc
      301 ctcgacacca acggcaacgg taagcgagac gaatgggtcg agcccaacga gcccgtggat
      361 gcggcgaaag acaaacgggt ggtcatcggt tactacggcg tggccgtcaa tcccgtagac
      421 ggttccgtct ggggaacgtc gcttggtttt cccggctacg tcactaggtt cgacccggga
      481 cccaacccca ccgaaaccgg cctgacggag atctacgaag cgccggtcga aatgaacggt
      541 tacggcgttc gcggcatgga tatcgatcgc aatggcgtcg cctgggtatc gctatccagc
      601 gggcatctcg gaagcttcga ccgacgcaaa tgcaaggtca taaacgggcc aacggcgacg
      661 ggaaagcact gccccgaagg ttggacgctg taccaattgc caggaccaca attccagaat
      721 ttgactgaac ctggcagcat cgaatccagc tactacacct gggtcgatca gttcgacact
      781 tttggtttgg gccgggacgt gcccatcgcc acgggaaact tgaatgatgc gctgctggca
      841 ttagtcgatg gaaagtttgt tgtcctacgc gttccctatc cactgggatt ttacaccaag
      901 tggatggacg gtcgcataga cgatccgaaa gctggctgga agggcaaggg actgtgggca
      961 acccacggca cgcgagcgcc ttttcacctc gaaggcggca aggggacaaa gcccaaggtc
     1021 gtgaagttcc agctgcgacc tgatccgttg gcaaaatgaa cagatctgga gtacggcata
     1081 caaatatacc gacttttcgg tgttaacaca gcaaacttac ctggaaagga tcaaatacta
     1141 tgccgaagat tacccttaaa aacgttacgg tctccgacgc ttatatgaca ttgctcgccg
     1201 accggggaat cgactactgg tttgccaatg ccgggaccga tttcgctccc gtggtcgaga
     1261 ctttggcgaa ggcggaaatt ttggaaacga aggtgcccaa gcctgtgacc tgtccgcatg
     1321 aaaataccgc gatgcacatg gcgattggat atttcctcgt gaccggaaaa ccgcaggcgg
     1381 tcatggtgca cgtcaacgtc ggcacggcta acgggatgaa cggcctgctc aacgccgcgc
     1441 ggggtcacgt gccggtgttg ttcaccgcgg gccgaacgcc gactaacgaa gacggcttgg
     1501 ccggccatcg cagcctcgat attcattgga cccaggagat gttcgatcag gcgggaatgc
     1561 tgcgtgagtc ggtcaaatgg gactatgagc tgcgcaacgg cctgcaactc gaaaccgtcg
     1621 tcgacagggc gttgacgatc gccaagagcg agcccatggg cccggtctat ctttccctgc
     1681 cgcgggaggt gctggcgcag acgatggcgg agttcaccta taccacgccg tcacgtcaac
     1741 atgctgctgc tccggcgttt cccaacggtg aagcagtcga acagctggcg gcgctgctgg
     1801 ctgctgccga gaacccgctc atcatcacca gctcggccgg tagagatcct agagcctggt
     1861 cggcactagc cgactttgcc cagcgctacg cgatccctgt gattcagtat cgcaaccgct
     1921 acatgtcgat tcccagcaac cacccgatga atttgggcta cgagctctcg ccgttgcttg
     1981 aaaatgccga cgttattttg gcgatcgacg tccctgtgcc gtggttaccg gcctacgaca
     2041 aggtgcgcga cgacgccaag gtcatccaca tggggcccga tccgctgcac ggatacgtgc
     2101 cggttcgcgg tcacccgtgc gatatcgcat tagcctgcgc gaccgccgaa ggattgcggg
     2161 tgctaaatga atcaatggcg cagcacgaag gcaaggcaaa gatgcgcatc gataagcggc
     2221 gcgcggcgct tgcggagcag tggagaacgt tgcgcgagaa ttggcgcaag aaactcgagt
     2281 cggt
//
LOCUS       DATDHO010000391         7031 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_19258, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000391 DATDHO010000000
VERSION     DATDHO010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7031
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19258"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            250..1353
                     /locus_tag="VIY07_07575"
     CDS             250..1353
                     /locus_tag="VIY07_07575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY6381650.1"
                     /translation="MPPCTGDHIKCGTPAILAALTLFLASGCSPQTDTAAPQPRPVRT
                     VTVEQRAAGATITLTGRIEAEDEVALAFRISGRVLENDRKLGDRIEAGQVVARLESQN
                     ERNALRAAQANLIASQGQLTQARNHFERQDTLLKQGWTTRANHDQAKQAQQTAESQVD
                     AAEAQVKTAYDQVSFTELKADAPGVVTAVGPGAGEVVQAGQMIVRVARRGGRDAVFDV
                     PAQVLRTAASDPRITVSLTDDPKVTTTGRVREVSPQADPVTRTFAVKVGLNDPPPAML
                     LGATVTGRMEGDSVPVIDIPATALTKFNSQPAVWIVDPSNRTVSIRNVDVLRFDPARV
                     AVSGGLTTGEVIVTAGVQALHPGQKVRLLGLEP"
     gene            1355..4417
                     /locus_tag="VIY07_07580"
     CDS             1355..4417
                     /locus_tag="VIY07_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6381651.1"
                     /translation="MGFNLSEWALNNRSLTVYLMIVAVLAGLFAFVRLGRNEDPSFVI
                     KTMVVQAAWPGASVDDMLKQVTERLERTLQETPELDFLRSFTRAGVTTIFVNLKDSTG
                     AREIPDIWYHVRKSIGDMRHTLPAGVVGPGFNDEFGDTFGIIYGFTADGFTHRELRDY
                     VEDVRSKLLHVRDVSKIEILGAQDEKIFVEFSMEELASLGIDRSALISALQAQNVVQP
                     AGTIQTGNETLSLRVSGAFRSEEDVANVNFAVGGRMLRLSDIARVRRGFADPPQPLFR
                     VNGQPAIGLAIAMRDGGDILALGKNVQRAIAEITADLPVGIEPKLVADQPATVEGAIS
                     EFMTSLWQAVAIILLASFVSLGFRPGLVIASAIPLTLVVVFSIMLMSGIDMQRISLGA
                     LIIALALMVDDAMTTTDAMLTRLAQGDDKVQAATFAFRTYAFAMLAGTLVTIAGFVPV
                     GFAASGAGEYTFSLFAVVTIALIVSWFVAVLFAPLLGVAILTPPRAATSSEPGWVFRT
                     YRAFLTGALRARWLTIALTLAMFVASVFAIRLIPNQFFPSSDRPELLVDLTLPQNASI
                     FASETVARRLDDVLKDDPDVARWSTNVGRGAIRFYLPLNVQLPNNFFSQAVVVAKDVP
                     ARERLRQKLEKILADEFPNLVSRVSTLELGPPVGWPVQYRVSGPDIAQVRDIALKLAQ
                     AVAKDQQVVHVNYDWFEPARQVRIRIDQNEARLLGLSSQALASVLNTVISGSAITQVR
                     DDIYLVDVITRATDEERVSLDTLRSIQVPLANGRTVPLSQFASFTYDQEQPLIWRRDR
                     VPTLTVQADVKSGVLPATVVDALAPSIAELNKTLPRPYRIAAGGVVEDSAKAQASVIA
                     VVPAMLLIMLTVLMVQLRSFSLLFIVLSVGPLGLIGVVGALLLSGKPLGFVAILGILA
                     LLGMITKNAVILIGQIEAERSQGKDIWQAAVDASSTRFRPIMLTAISTVLGMIPIAPT
                     VFWGPMAFAIMGGLLVGTILTLVFLPTLYVTWFRGKEVRSEAKLATVH"
     gene            4463..5500
                     /locus_tag="VIY07_07585"
     CDS             4463..5500
                     /locus_tag="VIY07_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY6381652.1"
                     /translation="MAKQPKSDRDAVLVDLALQGGGSHGAFTWGVLDRLLEEPWLRID
                     GISGTSAGAMNGAVLVAGFSAGGAEGARSALDAFWKRVSHSARFSPIRRSPLDIMLGR
                     WTLDTSPFYLAFDLASRVFSPYDLTPRGSNPLRDVLAESVDFDQVKRAPIRLFVTATN
                     VRTGRGRVFRNDEITPEVLLASACLPTLFQAIEIEGEPYWDGGYSGNPTITPLVRECK
                     SRDTLLVAVNPVERPGTPRSAREILDRLNEVSFNATLLKELRMIALLRQVADPGSSEG
                     AQWAHMRIHLIASSVLPTLGASSKFNAEWDFLCMLRDEGRRCAEAFLSTHAGNLGKQS
                     SIDLDVLLRQV"
     gene            5505..6959
                     /locus_tag="VIY07_07590"
     CDS             5505..6959
                     /locus_tag="VIY07_07590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEY6381653.1"
                     /translation="MGLIGILAALGLLIWLSFRGWSVLLLAPAVALVAAAAAREPLLA
                     HWTQTFMGSAAQFVAQFFPIFLLGALFGKLMDDSGSVQSIAKFMSEKLGHQRAILAVV
                     LAGALVTYGGVSLFVAFFVLAPMARALFQAANIPQRLMPAAIALGTSTFTMSAMPGTP
                     AIQNTIPMPFFGTTPFAAPGLGIIASAIMLAFGLWWLGRAEASARRSGEGFGGEVDVV
                     PKQVADDQFIRERATAAHEFDPAEIAHGKHADTAPSVGMAIIPLLVVVAFNLLLSIFI
                     LPRLDFSFLAEERWGGTSLAAVAGVWSVAVALAAASATLIVINWQRLPDLRASMDAGA
                     NAAVLPIFAVASLVGFGAVVAALPAFAMVRDWVLSIAGGPLVSLAIATNVLAALTGSA
                     SGGLTIALDALGATYLRLAAETGIDPALMHRIAVIGSGTLDSLPHNGAVVTLLAVCGS
                     THRKSYFDMVMANIVGPILALVAVIFLGSTLGSF"
BASE COUNT         1291 a         2114 c         2104 g         1522 t
ORIGIN      
        1 aaaatcatcg gcgaaatgtc aaaggtgata ttgggcgact gaaacgaaat tgggtccaaa
       61 attgggtcca gttctgcctc tgttccgact acgtcactga taagccaact tgaataagta
      121 ctgtgggacc gaggtccaat atctggggct ctcggtgcta cggtaatctg gctgcaatgc
      181 agcaattcct gcgcacagcc agccaacgct ttcatcatcc gcattgactc aaaggagaag
      241 actcggtcca tgcctccgtg caccggcgat cacatcaagt gcggtacgcc tgccatcttg
      301 gctgcgctga cacttttctt agcgtcgggt tgttcgccac aaaccgatac cgcagcacca
      361 cagcctcgtc cggttcgaac cgtcacagtc gagcaacgcg ccgccggcgc gaccatcact
      421 ttgaccggac gaatcgaggc ggaggacgaa gttgcgctcg cattccgcat ctccggtcgg
      481 gtgctcgaaa acgatcgcaa gcttggagat cggatcgagg caggacaggt cgtcgcgcgg
      541 ctggaatccc agaatgaacg gaatgcactg cgtgccgcgc aagccaacct cattgcctcg
      601 caaggtcaac tgacgcaggc gcgcaatcat ttcgaacgac aggacacgct tctcaagcaa
      661 ggctggacca cgcgggcaaa ccatgaccag gccaagcagg cgcagcaaac tgcagagtcg
      721 caggtcgatg ctgccgaggc acaagtgaag actgcttacg accaagtgag ctttaccgaa
      781 ctcaaggcgg atgcacctgg agtcgtcact gccgttggtc ctggcgcggg tgaagtcgtg
      841 caggccggcc agatgattgt tcgagttgcc cggagaggtg gacgcgacgc ggtattcgat
      901 gtgccggcac aggtactccg cacggcggca agtgatcctc gtattaccgt gagtctcacc
      961 gacgatccaa aagtcaccac gaccggtcgc gtgcgcgaag tctcgcccca ggccgatcct
     1021 gtgacacgga ctttcgcggt caaggtcggc ctgaacgatc ctccgccggc aatgctgctt
     1081 ggcgcgacgg tgacggggcg tatggaaggc gattcagtgc ccgtcatcga catccctgca
     1141 acggcgctga cgaagttcaa tagtcaacca gccgtctgga tcgtcgaccc atcaaaccgc
     1201 acggtttcga ttcgcaatgt cgacgtgttg cgtttcgacc cggcgagagt tgcggtctcg
     1261 ggcggtctta cgaccggcga ggtcatcgtc actgcgggcg tgcaagccct gcaccccggc
     1321 cagaaggtgc ggttgctcgg gttggagccg taatatgggc ttcaatcttt ctgaatgggc
     1381 gctcaataat cggtcgctca cggtctacct gatgatcgtg gcggtgctcg cgggtctctt
     1441 cgctttcgtc aggctcggcc gcaatgaaga tccatcgttt gtcatcaaga cgatggtggt
     1501 gcaggccgca tggcccggcg ccagtgtcga cgacatgctt aagcaggtta ccgaacgact
     1561 cgaacggacg ttgcaggaaa cgccagaact cgacttcctg cgcagcttca cgcgggccgg
     1621 cgtgaccacg atcttcgtca atctcaagga cagcacgggc gccagggaga ttccggacat
     1681 ctggtaccat gtccgcaaaa gcatcggcga catgcgtcat accttgccgg cgggcgttgt
     1741 cgggccgggc ttcaatgatg agttcggcga cacattcggg atcatttacg gcttcaccgc
     1801 cgacggattt acgcatcggg agcttcgcga ctatgtcgag gatgtccgct cgaagctcct
     1861 gcacgtccgc gacgtttcca agatcgaaat tctcggcgcc caggacgaaa agatcttcgt
     1921 cgaattctcg atggaagagc tggccagtct tgggattgac cggtcggctc tgatctcggc
     1981 gctgcaggcg cagaacgtcg tgcagccggc cggcacgata cagaccggca acgaaacact
     2041 gtcacttcgc gtgtcgggcg cattccgctc cgaagaggac gtggcgaacg tcaacttcgc
     2101 ggtcggcggg cgcatgctgc gcctgagcga cattgcacgc gtcagacggg gctttgcgga
     2161 tcctccgcag ccgttgtttc gggtcaacgg gcagccggcc atcgggcttg ccatcgccat
     2221 gcgcgatggt ggtgacatcc tggccctggg caagaatgtt caacgcgcta ttgccgagat
     2281 caccgcggat ttgccggtcg gcattgaacc gaagctcgtg gcggatcagc cagcaacggt
     2341 cgaaggcgcc atttccgaat tcatgacgtc gctgtggcag gcggtcgcga tcattctcct
     2401 ggcaagtttc gtcagcctcg gctttcgtcc cggtctggta atcgcctccg ccattcctct
     2461 tacgctcgtc gtggtttttt ccatcatgct gatgtccggc atcgacatgc agcgcatttc
     2521 gctcggcgct ctcatcatcg cgcttgcttt gatggtcgac gatgccatga cgaccacgga
     2581 tgccatgctg acacggctgg cacagggtga cgacaaggtg caggccgcga cgttcgcatt
     2641 ccgcacctat gcattcgcca tgctggccgg cacgctggta acgatcgcag gctttgtccc
     2701 cgttggcttt gccgccagcg gcgcaggcga atacaccttc tcgctttttg ccgttgtcac
     2761 catcgcgttg attgtgtcct ggttcgtcgc cgtcctgttc gcgccgttgc tgggggttgc
     2821 tatcctcact ccacccaggg cggcaacgtc atccgaaccg ggctgggtgt tccgaaccta
     2881 ccgggcgttc ctcaccggag cgttgcgggc aagatggctg acaatcgccc tcacgctcgc
     2941 aatgtttgtc gcttccgtgt tcgcgatacg actcattccc aatcagttct ttccgtcgtc
     3001 ggaccgcccc gagctgctcg ttgatctgac gctgccgcaa aatgcctcga tttttgccag
     3061 cgagaccgtg gcgcgccggc ttgacgatgt cctcaaggat gaccctgacg tcgcacgctg
     3121 gagcaccaac gtggggcgcg gtgcaatccg gttctatctg ccgttaaacg ttcagcttcc
     3181 gaataacttc ttcagccagg cggtcgtcgt cgccaaggac gtccccgcgc gcgaacgcct
     3241 gcggcagaag cttgaaaaga ttctggccga cgaattcccg aaccttgtca gccgcgtttc
     3301 cacgcttgag ctcggcccgc cggtcggatg gccggttcag taccgcgtca gtgggcctga
     3361 catcgcacag gtgcgagaca ttgccctgaa gctggctcag gccgtcgcaa aagatcagca
     3421 ggtggtgcac gtcaactacg actggttcga gcccgcacga caggtgcgca tccggatcga
     3481 tcagaacgag gcgcgtctgc tggggctaag ctcgcaagcg ctcgcgagcg tgctcaacac
     3541 cgtcatttcg ggcagcgcca tcacgcaagt gcgcgacgac atttatctgg tcgacgtcat
     3601 tacgcgcgcg accgacgaag aacgagtctc gctcgatacc ttgcggtcca tccaggtccc
     3661 gcttgcaaac ggacggaccg tgccgctgag tcaatttgcg tcgttcacct atgaccagga
     3721 gcagcccctg atctggcgcc gtgaccgcgt tccaacactc acagtacagg ccgacgtcaa
     3781 atcgggagtg cttcccgcaa cggtcgttga cgcgttggcg ccgtcgatcg cggagctgaa
     3841 caagaccctg ccgcgaccct accggattgc agcgggaggc gtcgtggagg acagcgcgaa
     3901 ggcacaggct tcggtgattg ccgtcgtgcc agcgatgctt ctgatcatgt tgaccgttct
     3961 gatggtgcag ctgcgaagct tctcccttct gttcatcgtc ctcagcgttg ggccgctcgg
     4021 gttgatcggc gtcgtggggg ctctgttgtt gtccggcaag ccgcttggct tcgtcgctat
     4081 cctcggcatt ctggcgctgc tcggcatgat caccaagaac gccgtaatcc tcatcggcca
     4141 aattgaagct gaaagaagtc agggcaagga tatttggcaa gcggcggtcg acgccagcag
     4201 tacgcgcttc cgcccgatca tgctgacggc gatttcaacg gttctcggca tgattccgat
     4261 cgcaccaacg gtgttttggg gaccgatggc cttcgccatc atgggaggat tgcttgttgg
     4321 aacaatcctt acgctggttt ttcttccgac actgtatgtg acctggttcc gcggaaagga
     4381 agttcgttcg gaagcgaagc tcgcaacggt gcactagcgc aaagcgcggg tcagccgata
     4441 gcgcgtcaaa tacgaggtta cgatggcgaa acaaccgaag tccgatcgtg atgcagtact
     4501 cgtagacctt gcgttgcagg gaggcgggtc tcacggcgcc ttcacgtggg gtgtgctgga
     4561 tcggctcctc gaagaaccct ggctccgcat cgatggcata tctggtactt ccgcaggagc
     4621 aatgaatggt gccgtgctag tcgcgggatt ttccgcgggc ggtgccgaag gcgccaggtc
     4681 tgcgctcgat gctttctgga aacgtgtttc gcactcggcg cgatttagtc ccattcggcg
     4741 cagcccgctg gacatcatgc tgggccggtg gacgctcgat acatcgccgt tttacctcgc
     4801 cttcgacctc gcgagccgcg ttttctcgcc ctacgatttg accccgcgcg gcagcaatcc
     4861 gctgcgcgat gtcctcgctg agtccgttga ctttgatcag gtaaagcgag ccccgatccg
     4921 gctgtttgta acagccacca atgtccgtac gggtcgcgga cgtgtctttc gcaacgacga
     4981 gattacgccc gaggttcttc tggcgtcggc ctgtctgcca acgctattcc aggcgatcga
     5041 aatcgaagga gaaccgtatt gggatggcgg ctattccggc aatccgacaa tcactcccct
     5101 cgtccgcgag tgcaagtcgc gagacacact gcttgtcgcg gtcaatcccg tcgaacggcc
     5161 cggcaccccg cgatcggcgc gcgaaattct tgatcgattg aacgaggtct catttaacgc
     5221 gacgctgctc aaggagctgc gcatgatcgc gctgttgcga caagtagcgg atccgggaag
     5281 cagcgagggc gcgcagtggg ctcacatgcg cattcatctg atcgcgagct cggtgcttcc
     5341 cacgcttgga gcatcgtcca aattcaatgc ggaatgggac tttctgtgca tgttgcgcga
     5401 tgaaggccgg cgttgcgccg aagccttcct gagcacccat gcagggaatc taggcaagca
     5461 atcttctatc gatctcgacg ttctacttcg gcaggtctga tgcaatgggt ctcatcggca
     5521 tcctcgctgc acttggactt cttatctggc tgtcttttcg aggctggagc gtgcttctcc
     5581 tcgccccggc cgttgcgttg gtggccgccg ccgccgcgag agagcccctt ctcgcccact
     5641 ggacgcagac cttcatgggc agcgcggcac aattcgtcgc acaattcttt cccatatttc
     5701 tgctcggcgc gctgtttgga aaactgatgg acgacagcgg atcggtgcag tccatcgcga
     5761 aatttatgag tgaaaagctt gggcaccagc gcgcgatcct ggctgtcgtg ctggccggtg
     5821 cactggtcac ctacggcggc gtgagtcttt tcgttgcctt ttttgtgctg gcgccgatgg
     5881 cacgcgcgct attccaggca gccaacatac cgcagcggct gatgccggca gcgattgctc
     5941 tcggaacgtc gacattcacc atgtcggcaa tgccaggaac ccctgcgatc cagaacacga
     6001 ttccgatgcc gttttttggc accacgccat ttgcagcgcc cggattggga atcattgcat
     6061 cggcgatcat gctggcattc gggctgtggt ggctcggtcg cgccgaagct tcggcgcgca
     6121 ggtccggtga aggcttcggt ggcgaggttg atgtcgtacc caagcaggtc gccgacgatc
     6181 agttcattcg tgaacgcgcg acggccgcgc atgagttcga tccggctgag attgcgcatg
     6241 gaaagcatgc cgacacggca ccatcggtcg gcatggcaat tattccgctt ttggtggtcg
     6301 ttgcgttcaa cctactgctg tcaatcttca tcctgccgcg tctcgatttc tcattcctgg
     6361 ctgaagagcg ttggggcggc acgtcgcttg ctgccgtcgc aggagtatgg tcggtcgcgg
     6421 tagcgctcgc tgccgccagt gccacgctca ttgtcatcaa ctggcagcgc cttcccgatc
     6481 tgcgggccag catggatgcg ggcgcgaatg cggctgtgct gcccattttt gccgtcgcaa
     6541 gcctggtcgg attcggcgcg gtcgttgccg cgctccccgc attcgcgatg gtgcgggact
     6601 gggtgctatc gattgccggg ggaccacttg tttcactcgc tatcgccacg aatgttcttg
     6661 ccgccttgac cggctccgcc tccggcgggt tgaccatcgc cctcgatgcg cttggcgcga
     6721 cctatttgcg tcttgccgcc gaaaccggaa tagatccggc gttgatgcat cgcattgctg
     6781 tgattggctc gggtacgctc gacagcctgc cccacaatgg cgccgttgtg acccttctcg
     6841 ccgtctgtgg atcaacgcac cgcaaaagtt atttcgatat ggtcatggcc aatattgtgg
     6901 gtccgatttt ggccttggtc gccgtgatat ttttaggttc gacgctcgga tcgttttagc
     6961 ggcaggctgg ccgtaccgat cagttgacca aagccaagcg gacgcctcca ccggcgacat
     7021 ataaaacaag a
//
LOCUS       DATDHO010000392         2464 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_118703, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000392 DATDHO010000000
VERSION     DATDHO010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_118703"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1212
                     /locus_tag="VIY07_07595"
     CDS             <1..1212
                     /locus_tag="VIY07_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381654.1"
                     /translation="ELRITHLDVAADARPLDRRVVITALGIAQILAWGTSFYFPAVFA
                     EPIVAETGWSLGFVVGGTSIGLLTAGLISPQVGRAIDVHGGRPVLLASSLFYAAGLAL
                     VGFSPALPIYLAGWVLIGIGMGSGLYDAVFAALGRMYGSEARGPITNLTLFGGFASTV
                     CWPLSAFMIEQFGWRSACFIYAAIHLFVMLPLQAAVVGSVRKVEKPHTTPTAAADASR
                     INNEALIFALLALVLSIAAGIGSIVVVHLLIFLQARRVDFATAVSLGTLFGPAQVGAR
                     VVESLFGKRYHPIWTMIASCTLMAVGLLLLFGAVPALILVILLYGAGYGISWIGRGTL
                     PLALFGPVRFPRLMGKLAFPSLIVQALAPSAGALLLEAKGADTTIGVLTLFALINAAL
                     IASLWWLCRKP"
     gene            1915..2370
                     /locus_tag="VIY07_07600"
     CDS             1915..2370
                     /locus_tag="VIY07_07600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY6381655.1"
                     /translation="MLTLRMLYFEDLSVGMTETLSKIIDASDVVGFAEVTGDRNPVHL
                     SEHFAAKTPFGTRIAHGLYTASLISAVLGTRLPGPGAVYISQTLNFRAPVKIGDTVDV
                     KVLVAELMPDKFRARLTCTCSVGDEVVLDGEAWVKVPTKESGGRPLPRI"
BASE COUNT          450 a          696 c          746 g          572 t
ORIGIN      
        1 gaactaagga ttacgcattt ggatgtggcc gcagacgcgc gcccgcttga tcggcgcgtt
       61 gtcattaccg cgctgggcat cgctcaaatc ctggcttggg ggacatcgtt ctatttcccc
      121 gcggtgtttg ctgagccgat tgtcgccgag actggctggt cacttggttt tgtcgtcggc
      181 ggcacatcaa tcggcttgct cacggcaggt ctgatttccc cgcaggtcgg tcgcgctatc
      241 gatgtccacg gcgggcggcc tgtgctgctg gcgagctcgt tgttctacgc ggcgggcctc
      301 gcgctggtgg gcttttcacc ggcgctgccg atttatctgg ccgggtgggt gctgatcggc
      361 attggcatgg gcagcggcct ttatgatgcg gtgttcgctg cgcttggccg catgtatggc
      421 agcgaggcgc gcggacccat caccaatctc acgctgttcg gaggctttgc cagcacggtc
      481 tgttggccgc tgagcgcttt catgatcgag caattcggct ggcgcagcgc ctgctttatc
      541 tatgcggcga ttcacctgtt cgtcatgctc cccttgcagg ctgcggtggt gggctctgtg
      601 cgcaaagttg agaagccgca caccacgcca acggctgccg ctgacgcgtc acggataaac
      661 aatgaagcgc tgattttcgc tctgctcgcg ctcgtgcttt cgattgccgc cggcatcgga
      721 tcgatcgtcg tcgttcatct gctgattttc ctgcaggcca ggcgcgttga ctttgcgacg
      781 gcggtaagcc tcggcaccct attcggaccc gcgcaagtcg gcgcgcgagt agtcgagagc
      841 cttttcggca aacgctatca cccgatctgg actatgattg cctcctgcac gttgatggcc
      901 gtcggacttt tgttgctgtt cggagccgta ccagccctca ttctggtgat cctcctttat
      961 ggcgcgggct atggaatttc gtggatcggc cgcggcacct tgccgctcgc cctgttcggg
     1021 ccagtgcgat ttccgcgcct gatgggcaaa cttgcttttc caagcctgat cgtgcaggcg
     1081 cttgcgccgt cggctggcgc gcttctgctc gaggcaaaag gcgcggacac gaccatcggc
     1141 gtattgacgc ttttcgcgct gatcaatgca gcgctgatcg cttcactgtg gtggctttgc
     1201 cgcaagcctt aatcagggct tgcccgtgcc ccactgcgtg cactgcttgt caggcagctt
     1261 gtgaaatagc tcacataggg atcaaagtct ttcgtctata agtgtaagtc gcaggcatgg
     1321 cgatttaccg acgatgaggg gattggcgct atggaaaata attgcgatca gaccgagttt
     1381 ggggcgtttg ggtccgagat ttccgatgag gcattggaga ttgcggcgac aaacagcgcg
     1441 gacaaggctt gggccaacat caccatgtat tactgcacgg cgctatattt ttgcccggga
     1501 ccctagcgat cgttctggcg aaatgaaaaa acgccgacac gctttgtcgg cccaaaaaga
     1561 gctttttgtg attgccaaca cagcgcgacc cgagatcagg cctattctgg catcacccga
     1621 tcaggaatat gggccgcgca atgaaagaga cagcttccgt ccccagcaag gcactcgctc
     1681 acgagggagc gatcaggatt ccgcccaaag aatcaggcga accggacttt tccaagggag
     1741 ctgcaggtaa cgatcgcaaa aattggctct tctggttggc cgcataaggc cgttcctcac
     1801 caaaccccaa acctgtattt atccataaga ccaggggata aaatcttccc gcagtcttcc
     1861 cgcgtggatc cttgggaaga tcggggcttc aatgggcacg atcgggtatt gaaaatgctg
     1921 acattacgga tgctttactt cgaggacctc tctgtcggca tgacagagac cctcagtaaa
     1981 atcattgacg cctccgacgt cgtgggattt gccgaggtga cgggggatcg caacccggtt
     2041 catttgtccg agcattttgc ggccaagacg ccgtttggca cgcgcattgc gcacgggctc
     2101 tataccgcca gcctgatctc ggcggtgctg ggcacacgac tgccggggcc gggggcggtc
     2161 tatatctctc aaacgttgaa ttttcgcgca cccgtgaaaa tcggcgacac ggtcgacgtc
     2221 aaggttttgg tagccgagct gatgccggat aaattccggg cgcggttgac gtgcacctgc
     2281 tctgtcggcg acgaggttgt tcttgacgga gaagcctggg tgaaagtgcc gacgaaagaa
     2341 tccggcgggc gcccgctgcc cagaatttga cggcgagcct tatggccggc gaccacgtcg
     2401 gagctgcgct aattcttctt ggagccacca tcatcgggtt gatcgtgagg ggacgcagcc
     2461 cgat
//
LOCUS       DATDHO010000393         1532 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_267393, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000393 DATDHO010000000
VERSION     DATDHO010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1532
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267393"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(217..1011)
                     /locus_tag="VIY07_07605"
     CDS             complement(217..1011)
                     /locus_tag="VIY07_07605"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEY6381656.1"
                     /translation="MTPERDLLIFYAEAGVDALLGEVPVDRFASAEDTAPAGRAVRQS
                     PTPDPRPAMRASPPPPPPPPDEAASDARTAAKSAATLDELRGILERFEGCSLKPTATQ
                     LVFADGNPKARLMFVGEAPGRDEDIEGLPFVGRSGKLLDRMLAAIGLDRTSVYIANIV
                     PWRPPGNRTPTPQESQICLPFILRQIELADPEILVCLGGPSAQTLLGIKDGITKTRGR
                     WFSFHTGKREIRAMPTFHPAFLLRSPLQKRFAWRDFLAIKKALDQR"
     gene            1166..>1532
                     /locus_tag="VIY07_07610"
     CDS             1166..>1532
                     /locus_tag="VIY07_07610"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018325647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY6381657.1"
                     /translation="MPELPAREAMEFDVVVVGAGPSGLAAAIRLKQINPDIAVVVVEK
                     GSEVGAHILSGAVIDPVGLDRLLPDWRSEDTPIKTPVTDDRFYYLTAAGAVRLPNFIM
                     PPLMSNHGNFIVSLGSVCRW"
BASE COUNT          276 a          444 c          500 g          312 t
ORIGIN      
        1 aatgccgctg acctattcga ttgcgaccgg gattggcctc ggctttatta cgtacgcgct
       61 ggccaagctt gtttctggaa agccacgcga ggcttcgcct gcggtgatcg tgttggcgct
      121 gctgtttgca atcaagtttg ccgtcaccgg gtgattttgc atgaccctga actggcttgg
      181 tgtggtcctg atcgcgaccg gcgcaattct gatcacctat cgctgatcga gcgccttttt
      241 gatcgccagg aaatcgcgcc aggcaaaccg cttctggagc ggactgcgca agaggaaagc
      301 cgggtgaaac gttggcattg cgcgaatctc gcgcttgccc gtgtgaaaac tgaaccaccg
      361 ccctcgtgtc ttggtgatgc cgtccttgat gccgaggagt gtctgcgcag acggaccgcc
      421 aagacagacc aggatttcgg gatcggcgag ttcgatctga cgcaggatga aaggcagaca
      481 gatttgcgat tcctgcgggg tcggcgtgcg attgcccggc ggccgccacg ggacgatgtt
      541 cgcgatgtat acagatgtac ggtcgaggcc gatcgcggcc agcatgcggt caagtaattt
      601 gccggagcgg ccgacgaagg gaaggccctc gatgtcttcg tcgcggcccg gcgcttcgcc
      661 gacaaacatc agccgcgcct tcgggttgcc atcggcgaac acaagctgtg tagccgtggg
      721 cttcaaactg cagccttcga atctctcaag aatgccgcgc agctcgtcca gcgtcgccgc
      781 gctttttgca gcggtgcggg cgtcgctggc cgcttcatcg gggggaggag gtggtggtgg
      841 tggcgacgct cgcatcgcgg ggcgggggtc cggcgtcggg gactgccgaa cagcgcggcc
      901 agcgggcgcc gtgtcctcag ccgacgcaaa acggtcgacg ggtacttcgc ccagaagggc
      961 atcgacgccg gcctcggcat agaagatcag aaggtcacgt tcgggagtca ttgcggcgaa
     1021 caaaatacag tctgtcgggt tgccgcgcac ccggatagag caccaaagat ggtcgatgtg
     1081 ggcattctcg ccatattttt gcacactcct cgagcaagca aacgcaccaa actcgcgcta
     1141 gacttgcgag atcgaggaga cgcctatgcc tgagctgccc gcccgggagg caatggaatt
     1201 cgatgtggtt gttgtcggcg ccgggccgtc agggctcgcg gcggccatcc gcctcaagca
     1261 gatcaatccg gacattgcgg tggtggtggt ggagaagggg tccgaggtgg gcgcccacat
     1321 tctctccgga gccgtcatcg atccggtcgg gctcgatcgt ctgttgcctg actggcgctc
     1381 ggaagacacg ccgatcaaga cgcctgtcac ggacgatcgc ttttattatc tcacggctgc
     1441 cggtgccgtt cggctgccca atttcatcat gccgccgctg atgagtaacc acggcaactt
     1501 catcgtttcg ctcggcagtg tctgtcgctg gc
//
LOCUS       DATDHO010000394         1558 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_19417, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000394 DATDHO010000000
VERSION     DATDHO010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19417"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            33..>1558
                     /locus_tag="VIY07_07615"
     CDS             33..>1558
                     /locus_tag="VIY07_07615"
                     /inference="COORDINATES: protein motif:HMM:NF019223.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1553 domain-containing protein"
                     /protein_id="HEY6381658.1"
                     /translation="MADIAAFRLELMTDPNLPLGGPGRSYKGSCGLTEFEVEAAPAAS
                     NKGEEKKAAKLKIARATADVNPPEVEVEMKFNDKSGRRRVTGPIDFAIDGKDETGWSI
                     DAGPGLRNQPRKAVFNLEKPLANAGGATLTFYLSQRHGGTNNNDNEQQGIGRFRLSMT
                     SALDAVADSVPAGVREIFGVPREQRTKAQVEAVFSYWRTTVPEFAGYNRQIDALWRQH
                     PEGASQLVMNERAEARDSFTLKRGDFLRPDQLVTPGVPAFLHPLPTTASANRLTFARW
                     LVDRQAATTARAQVNRLWQAYFGTGIVATAEDLGKQSEMPSHPELLDWLAVELMDGGS
                     DAANFKSRSSPSASSKWALKHIHRLIVTSATYRQASKATPRLLEKDPRNRLLARAPRL
                     RVEGEIVRDIALAASGLLNPRIGGPSVFPPSPEFLYLPPASCGTKSWREEKGENRYRR
                     ALYTFRFRSVPYPVLQTFDVPNGDVSCVIRARSNTSLQALTTLNETLFMEAARALAMK
                     T"
BASE COUNT          323 a          490 c          469 g          276 t
ORIGIN      
        1 agcatcgcgt gaagctgatc tggcctacgg acgtggctga catcgcggcc tttcgacttg
       61 agttgatgac cgatccgaat ttgccgctcg gcggccccgg ccgctcgtat aaaggctcgt
      121 gcgggctgac cgaatttgaa gtcgaagccg cgccagccgc ctcaaacaag ggcgaggaga
      181 agaaggccgc aaagctcaaa atcgcccgag cgaccgccga tgtgaatccg cccgaagtcg
      241 aggttgagat gaaattcaac gacaagagcg gcaggcggcg cgtaacaggg ccgatagatt
      301 ttgcgattga cggcaaggac gagaccggct ggagtattga cgccggtccc gggcttcgca
      361 atcaacctcg caaggccgtc ttcaacctgg aaaagccgct tgccaatgca ggcggcgcaa
      421 cgctgacgtt ctacctgagc cagcggcacg gcggaactaa caacaacgac aacgaacagc
      481 aaggcatcgg gcggttccgc ctgtcaatga cgtcggcgtt ggatgcagtc gccgactccg
      541 tgccggcggg tgtgcgcgaa atattcggcg tcccgcgcga gcaacgcaca aaagcccagg
      601 ttgaggccgt gttcagttac tggcgcacga ccgtccccga attcgccggc tacaaccggc
      661 agatcgacgc gctctggaga cagcaccccg aaggcgcttc acaactggtc atgaacgagc
      721 gcgccgaagc gcgcgactcc ttcacgctca agcgaggcga tttcctgcgc ccggatcaac
      781 tggtcacgcc cggcgtgccc gcgtttttgc acccgcttcc caccaccgcg tccgccaatc
      841 gcctgacgtt cgcgagatgg ttggtcgatc gtcaggcggc gacgacggcg cgcgcgcagg
      901 tcaatcgttt gtggcaggct tatttcggca cagggatagt ggcgacggcg gaagacctgg
      961 gcaaacagag cgaaatgccg tcacatcccg aattgttgga ttggctcgcg gtcgaattga
     1021 tggatggcgg gagcgacgcc gcgaatttca aatcccgaag ctctccatcc gcatcctcca
     1081 aatgggcgct caagcacatt caccgtctga tcgtcacgtc agcgacatat cgccaggcat
     1141 caaaagccac cccgcgatta cttgaaaagg acccgcggaa ccggctgctg gcgcgcgcgc
     1201 cgcgtttgcg cgtcgaaggc gaaatcgtgc gcgatatcgc cctggcggcc agcggcctgc
     1261 tcaacccgcg catcggtggc cccagtgtct ttcccccttc gccggagttt ttatacctgc
     1321 cgccggcgag ttgtggaacc aaatcctggc gcgaagaaaa aggcgagaat cgttaccgcc
     1381 gcgccctcta caccttccgt tttcggtccg tgccataccc ggtgctgcag acgtttgacg
     1441 tccccaatgg ggatgtttcg tgcgtcatcc gcgcgcgctc caacacgtcg ttgcaagcgt
     1501 tgaccacgct taacgagacc ttgtttatgg aagcggctcg cgcgctggcc atgaaaac
//
LOCUS       DATDHO010000395         5719 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_19418, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000395 DATDHO010000000
VERSION     DATDHO010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5719
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19418"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..1058
                     /locus_tag="VIY07_07620"
     CDS             126..1058
                     /locus_tag="VIY07_07620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY6381659.1"
                     /translation="MRPTIGLALGGGAARGFAHIGVIRKLLEHGIVPDVIVGTSIGAV
                     VGGCYAAKEMDNLETWARTLTVRGVLSYLDLSLSGSGLIGGGHLASRLESGLKDTRID
                     DLPIRFAAIATEFNTGHEIWLTRGRLSEALRASYSLPGIFPPVLIGGRWLVDGALVNP
                     VPVSAARALGARLVIAVNLNGDLFGRGTIIASHGSDDGEAVSAQPKSNGLRGMFAGDR
                     SLRRQFFGRRGRPGLPTVMVEAFNVMQDRITRARLAGDPPDVLISPRLGGIGWFDFHR
                     AHEAIQIGSEFTEKAISAVSEAVTALSQPANGSL"
     gene            complement(1067..1504)
                     /locus_tag="VIY07_07625"
     CDS             complement(1067..1504)
                     /locus_tag="VIY07_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY6381660.1"
                     /translation="MNVKAILAAKKLGGDIISIEPTADLATAAKLLSKHRIGAVLIRG
                     AGERLAGILSERDIVRALSEHGADALALPVGQVMTREVATCGEDDTCASIMERMTAGK
                     FRHMPVIANGQLVGLISIGDVVKQRVEEIEGESEAMRDYIRTA"
     gene            complement(1664..2407)
                     /locus_tag="VIY07_07630"
     CDS             complement(1664..2407)
                     /locus_tag="VIY07_07630"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEY6381661.1"
                     /translation="MKREPLFNIPSVLVAVLAVLVLVHGYTLLLSDEQKLEFLLSFAF
                     IPARYDTSNVLAGMLPGGGADIWTFVTYALIHADWTHLAVNAIWLLPFGSAVARRFGS
                     TRFLAFFVVTAAAGAAAHLATHSGEQFPMIGASAVVSGTMAAAMRFAFQRGGPLTLLG
                     RADEESYRVPAVPLRGVLSETRVMLFVAVWFGINILFGLGSLPITGEEHQVAWEAHIG
                     GFLAGLLLFSWFDPAPQPPPSEDSAATRH"
     gene            complement(2912..3277)
                     /locus_tag="VIY07_07635"
     CDS             complement(2912..3277)
                     /locus_tag="VIY07_07635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381662.1"
                     /translation="MLHRDIPKRPDVELGQRAFPQPIRLRQRSYDAKSSSAGPFVMCK
                     RQQQQFQLNFRPIFGAAKNAGHEGLIFINHRGQDRIDLISARITPNAFEGLAFELTRK
                     QCADSSARKTKPYLVSEIC"
     gene            3455..4078
                     /locus_tag="VIY07_07640"
     CDS             3455..4078
                     /locus_tag="VIY07_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HEY6381663.1"
                     /translation="MALPLTKPVFLPLAEERRRHQRVKVNLLGRYMLADRREFPCQVI
                     DMSPGGMALIAPIAGQPGERVIAYVDHLGRLEGKIARVLENGFAMTISATLRKRDKLA
                     AQLTWLANRQILNLPEDRRHDRFTPRKTVARLVLPNGTNVACRVIDLSQSGAAIGVTP
                     DLRPAVGVVVTVGKTQGRVVRHIEDGFAIEFMRLQHPDFVEDNVTSE"
     gene            4408..5076
                     /locus_tag="VIY07_07645"
     CDS             4408..5076
                     /locus_tag="VIY07_07645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like cysteine peptidase"
                     /protein_id="HEY6381664.1"
                     /translation="MAGRLKQAFRAGSALAVASVAVAISTAAAAAGESTASLGGSWDP
                     GGRPVYLSVGEPTRAPIGWVDFCITYKAECATRLSEPRDVVLTAKAWTDMVKVNDWVN
                     ESIKPMTDLEHWGVVERWNYPDDGFGDCEDYVLLKRRLLMQAGWPREALLITVVRDRK
                     GDGHAVLTVRTDRGEFILDNQESQVFPWAKTGYRFVKRQSQSDPNLWVSLGEPIAPAT
                     VSSR"
BASE COUNT         1184 a         1736 c         1680 g         1119 t
ORIGIN      
        1 ccggagcctt cttcggcaga gagcgcgcta aggagataac gttcgttgtc ttcgagggct
       61 tgttcgcgcg aacgcgaaat ggcgaccgtg cggcggaagc gacgacgcaa ccgcagccgg
      121 cggccgtgcg cccgaccatc ggcctggcgc tcggcggcgg tgccgcgcgt ggttttgccc
      181 atatcggcgt catccgtaaa ctgctggagc acggcatcgt ccccgatgtg atcgtcggga
      241 cctcgatcgg cgcggttgtc ggcggatgtt atgccgccaa ggaaatggac aaccttgaaa
      301 cctgggcccg tactctcacc gtgcgcggcg tgctcagcta tctcgacctc agcctctctg
      361 gatccggact gatcggaggc ggccatcttg cgagccgcct tgaatccggg ctgaaggaca
      421 cccgcataga cgatctcccc atccgcttcg ctgcgatcgc tactgaattc aacacgggcc
      481 acgaaatatg gctcacgcgg ggtcgtctaa gcgaggcttt gcgtgcatcc tattcgctgc
      541 cgggaatatt tccgcctgtc ctgattggcg gacgctggct tgttgacggc gcgctggtca
      601 atcctgtgcc ggtctcggcc gcccgagctt taggcgctcg cctggtgatc gcggtcaacc
      661 tcaacggcga tcttttcgga cgtggtacga tcatcgcgag tcacgggtcg gacgacggcg
      721 aggctgtcag cgcgcagccg aaatccaatg gcctgcgtgg catgtttgcc ggcgatcgct
      781 cattgcgccg gcaatttttc ggccgacgcg gccgtcccgg actgccgacc gtcatggtcg
      841 aagccttcaa cgtcatgcaa gatcgcatca cacgcgcacg gttggccggc gatccaccgg
      901 atgtgctcat aagtccgcgg cttggcggca tcggctggtt cgacttccac cgtgcgcacg
      961 aagcaatcca gatcggctct gagtttaccg aaaaagccat cagcgcggtc agcgaggccg
     1021 tgaccgcgct gtcgcagccc gccaacggat cgctttaggt tggctgttac gccgtgcgga
     1081 tataatcgcg catcgcctcg gattcgccct cgatctcttc gacgcgctgc ttcacgacgt
     1141 caccgatgga gataagtcca actaattgtc cgttcgcaat taccggcatg tgacgaaatt
     1201 ttccggcggt catgcgttcc atgatgctgg cgcacgtgtc gtcctcgccg caggtcgcaa
     1261 cctctcgcgt catgacctgg ccgaccggca aagcaagcgc atctgcgccg tgctccgaca
     1321 gtgcccgcac gatgtcacgc tcggacaaga tccccgcgag acgttctccc gccccacgga
     1381 taaggactgc accgatacga tgcttggata gcaattttgc cgccgtcgcc agatcggccg
     1441 tcggctcgat gctgatgatg tcgccgccca atttcttggc ggccaggatc gccttgacgt
     1501 tcatggcagc ctccctggcg catgattatt gttcatggag tcatgcgcag aaaatacgcg
     1561 ccggctcaca acacaggtcg cagccggttt tgggaaacga tcatgctgag ccagcggttc
     1621 cgtcaagacg taaatgtgca acgcgtcttg ccggccaatc ccgttaatga cgcgttgcag
     1681 cagagtcctc ggacggcgga ggttgcggcg ctggatcgaa ccaggaaaaa agcaacagtc
     1741 ccgcgagaaa cccgccgata tgcgcctccc aagccacttg gtgttcctcg ccggtaatcg
     1801 gcaacgaccc aagtccgaac aggatattga taccgaacca taccgccacg aaaagcatca
     1861 cgcgcgtttc tgacagtaca ccgcgtagcg gaacggccgg gacgcggtag ctctcctcgt
     1921 cggcccggcc cagcagcgtc agcggacccc cacgttgaaa tgcaaaacgc atggcggccg
     1981 ccatggtgcc cgagacaacc gccgacgcgc ctatcatcgg aaattgttcg cctgagtgcg
     2041 tcgccagatg cgctgctgcc ccagcagcag cagtcacgac aaaaaaggca agaaaacgtg
     2101 tggagccaaa acggcgcgcc accgcgctgc cgaaaggcag aagccatatc gcattgacgg
     2161 caagatgggt ccagtcagca tggatgagag cgtaagtaac gaaggtccat atatcggccc
     2221 cgccgccggg cagcatgcct gcaagcacat tcgacgtgtc gtaacgcgcc ggaataaaag
     2281 cgaagctcaa caaaaattcc agcttctgtt cgtcgctcag caggagcgta tatccatgca
     2341 caagcacgag cacagccagc accgcgacga gcactgaagg gatgttgaaa agcggttcgc
     2401 gcttcacgag acaatccgga ggggcacgac tgagttacgc cgctttgctg ctccgccgca
     2461 agacagattt ttcgctgaga aaagggaggg cttttcgccc tccctttgag ccgagttacg
     2521 gggtgtcgcc gtagttaacg gtcagtcaca tcccctccgc ctccccgagg ctctcagctt
     2581 ttgagaaccc gccgtcggga attgcggcgg gccagccaca tggatgacgc gaaccatagc
     2641 cgggcggcat gcgatccgcc aacgcgactc tggttttaac gctaaccgca gttcacgggc
     2701 agcggtgggg tgtgcggcac gaaatgtgtt ctttagatta tggcatcgtc aaaccgcgcg
     2761 gcgcgccctg tcccaatcga ctatgaaaca cgattcaacc cgtaaattgt ttgactactg
     2821 gaatcggagg cgaggccgac gcctggtcgc ggcacgttcg gatatcgatc cgacagatat
     2881 ccgtgatgta ttgccggatg cattcctgct gtcagcagat ttcactgacg agataaggtt
     2941 tcgtcttgcg ggcactcgag tctgcgcatt gtttgcgcgt gagctcaaag gcgaggcctt
     3001 caaaagcgtt tggagtgatg cgagccgaaa tcaggtcgat gcgatcctga cctctgtgat
     3061 tgatgaaaat gaggccctcg tggccggcgt tcttggccgc accgaagatg gggcggaagt
     3121 tgagctggaa ttgctgctgt tgcctcttgc acatcacgaa cggacccgca ctcgagctct
     3181 tggcatcata gctccgttga cgcagccgta ttggctgcgg gaacgccctt tgaccgagct
     3241 cgacgtccgg acgcttcgga atatcgcggt ggagcaatct ttcgcctccg ccactcattt
     3301 ccaggcgcgg caaggagaac cgcgcacacg gcacggtttt cttgtctata gaggcggacg
     3361 agatttgcgg ccggatgagc gaagcggcta acgcatcgtt aacgatagcc taatacgctg
     3421 gccattacgg aaattgtttc cgatctcagc acctatggcg ttgcctttga ccaaaccggt
     3481 gttcctgcct ctcgccgagg aacgccggcg ccatcaacgc gtgaaggtaa accttctcgg
     3541 tcgctacatg ttggctgacc ggcgcgaatt tccgtgccag gtcatcgata tgtctcccgg
     3601 tggcatggct ttgatcgcgc cgatcgcagg ccagccgggt gaacgggtga ttgcgtatgt
     3661 ggatcatctc ggcaggctcg aaggcaaaat tgcgcgcgtg ctggaaaatg gttttgcgat
     3721 gaccatctcg gcaacgctgc gcaagcggga caagctcgca gcacagctga cctggctcgc
     3781 caaccggcag atcctgaact tgcctgaaga tcgccgtcat gaccgcttca ccccgcgaaa
     3841 gacggtggcc cggctggtct tgccaaatgg cacgaatgtt gcgtgccggg tgatcgatct
     3901 ttcacagtcg ggtgccgcca tcggtgtaac gccggatctc cgtccggccg tcggcgtcgt
     3961 cgtaacggtc ggcaagacgc aaggccgtgt tgtccgccat atcgaggatg gcttcgccat
     4021 cgaattcatg cgtctccagc atcccgactt cgtcgaagac aacgtgacca gcgaatagcg
     4081 tcacttttcg ataaacgctg cgcagggccg tcaaagttaa gcctggcggc cagctacaga
     4141 tccttgccaa gcatcccgcg ggcccgcgcc ggctaaacgc tgcgcgcaag ttcgcgcttg
     4201 gcagccatga cgcatcgagc gggtccccaa atgcgcgcaa tttgactcaa tttgcattgc
     4261 ttaggttttt aatcgaattc gaatccaaat ttcgcagtat tcttgtctgt ctttacttga
     4321 attatactaa aaatgacttc tcaaacttag cgccaataca aaggctttgt gagaaatgtg
     4381 gccccaacaa caggggaagg ggccgcaatg gccgggcgtc tcaaacaggc atttcgagcc
     4441 ggcagcgcgc tggctgtcgc cagcgtcgct gtggcgatat ccacggccgc tgcggccgcc
     4501 ggtgaatcca ccgcgtctct tggcggatca tgggatccgg gaggtcggcc ggtttatctc
     4561 tcggtcggag agcccacgcg cgcgccaatc ggctgggtcg acttctgcat cacgtacaag
     4621 gcggaatgcg cgacaaggct atcggagcca cgggacgttg ttctcaccgc caaggcctgg
     4681 acagacatgg tcaaggtcaa cgactgggtg aacgaatcga tcaagcccat gaccgacctc
     4741 gaacactggg gcgtggtgga acgctggaac taccctgacg acggctttgg cgattgcgaa
     4801 gactatgtgc tgctgaagcg tcgcctcctc atgcaggcgg gatggccgcg cgaggcactc
     4861 ctgatcacag tcgtgcgtga caggaagggc gatggtcatg cggtccttac cgtaaggacc
     4921 gatcgcggcg aattcattct cgacaatcag gaatcccagg tcttcccctg ggcgaagacg
     4981 ggctatcgct tcgtgaaacg acaatcacaa tccgatccga acctgtgggt ttcgctcggt
     5041 gaaccgatcg ctccggcgac cgtttcttcg cgctgacagg acaggaattc gcgctcccgg
     5101 tcacgtcccc acccctcccc gtccccagac cgggttcgcg agcggccggg cctcccccag
     5161 ggcccggccg cacactggac gcctcgcgat ttctctatct gtttgaccgc gctgattgag
     5221 acgcaattgc gcttgccgaa cgttgcccgg cgcgctttgc ccgaaccacg ctacggtggc
     5281 cgctggtgcg tttgcttcgc aagtcgggga cgcacgcaag caagcgcgag aacgagtgcc
     5341 aaaaatgcgc aactaaccca aaaccccgaa aaccgaacgg taccttgacg acgatgaaaa
     5401 ataagagtgc cgccatcgcg gcgagcacta tcattcggtc gctttgcaat tgatgatcat
     5461 ccaacgcaac tgccgcgcac agcagtatgg caaccaggac agggacagcg tgatatggct
     5521 cgagccaagg gctgaacggc aatggagcaa gcataagcac aacccaatcc gccagtgcag
     5581 cccgagaggg aatcggcaca caaaaggtcc ctcggcagcg ccacgcatat acgagcaacg
     5641 ccgcaagcca gatggtttca attgccaata gccacgcgcg cgttgtgtcg gatccgaatt
     5701 ctgcgccggt gagattcac
//
LOCUS       DATDHO010000396         1950 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_267483, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000396 DATDHO010000000
VERSION     DATDHO010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1950)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1950)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1950
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267483"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="VIY07_07650"
     CDS             complement(<1..240)
                     /locus_tag="VIY07_07650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY6381665.1"
                     /translation="MSEGANTSANRGGFRFKVRGPRDFYGGLALIGLAILAIWASGDL
                     PGMHGFAFGPGTAPRLFASLLVVVGALVALSGLLFD"
     gene            complement(360..890)
                     /locus_tag="VIY07_07655"
     CDS             complement(360..890)
                     /locus_tag="VIY07_07655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEY6381666.1"
                     /translation="MNDNPLIALAGYFALLSLFAVGGANAAIPEMHRIAVEVMHWMSD
                     RQFADSFAISQVSPGPNIIIVTLIGYHVAGLPGAAVATAAMCGPTCVLAFVVARTWDR
                     FKEARWRIAIQAGLVPVSLGLIAASAFVLARSADHNIYAAGITGITAIVGFATRINPL
                     WIFAVGGLLGLSGWLS"
     gene            complement(887..1456)
                     /locus_tag="VIY07_07660"
     CDS             complement(887..1456)
                     /locus_tag="VIY07_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate transporter"
                     /protein_id="HEY6381667.1"
                     /translation="MSASAGAAAPPVNRPTLSELFRAFVIVSISGFGGALPWARRMIV
                     EQRRWMTAEQFNEAFALSQFLPGPNVVNFSVVFGSRFGGAPGAAVALAGLMGPPLIIV
                     TILAFLYARFGDLEVLGRILAGITAAAVGLLIAVVAKMAAPLFRKRWDWAPLVAIAAF
                     IGVAIIQWPLPWVFIVLAPISIALAWIKR"
     gene            1611..1853
                     /locus_tag="VIY07_07665"
     CDS             1611..1853
                     /locus_tag="VIY07_07665"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381668.1"
                     /translation="MAARPVLIAQISDLHITRPGVLAYDRVDTAAAPLRSIDTLNAMS
                     PEADLVVISGDIADSALPEEYEHARTLLGALQIPLP"
BASE COUNT          433 a          615 c          587 g          315 t
ORIGIN      
        1 gtcgaagagc aggccgctga gagcaaccaa cgcgccgacg accacgagga ggctggcaaa
       61 gaggcgcggt gcggtgcctg gaccgaatgc gaagccgtgc atgcccggaa gatcgcccga
      121 ggcccagatt gcgaggatgg caagcccgat taacgcgagg ccaccgtaaa aatcgcgcgg
      181 cccgcgtacc ttaaagcgaa acccgcccct gttcgcggaa gtgttcgccc cctcggacat
      241 cctgttcctc cctgctcctt aattcttttg ttcttgcttc ttctgttggg ccggcccccg
      301 ccaattactc ccctagcaca cgatatggct ctgccggaag cacggatgtt cgaaagcggt
      361 caactcagcc agcccgacag gcccagcaga ccgccaaccg cgaaaatcca tagtgggttg
      421 atgcgggtcg caaatccgac aatcgcggtt atccctgtaa tcccagcggc ataaatgttg
      481 tgatctgcgc tgcgcgcgag cacaaaggcg ctggcggcta tcaatcccag cgacacgggg
      541 acgagccccg cctggatggc gatccgccag cgcgcctcct tgaagcgatc ccatgtgcgg
      601 gccacgacaa acgccagcac gcaagtcggc ccgcacatcg cggcggtcgc aacggccgca
      661 ccgggcaggc cggcgacgtg atatccgatc aacgttacaa tgatgatgtt cggtccgggc
      721 gaaacttgcg aaatcgcgaa gctgtcggcg aactgccgat cgctcatcca atgcatcacc
      781 tcgaccgcaa tgcgatgcat ctccggaatc gctgcgttgg cgccgccgac cgcaaacaac
      841 gacagcagtg caaagtaacc ggccagcgcg atcagcggat tgtcattcat cgttttatcc
      901 acgcgagtgc gatgctgatc ggcgcaagca caataaacac ccacggcaat ggccactgga
      961 tgatcgcgac gccgatgaag gcagcgatcg caacgagagg cgcccaatcc caacgcttgc
     1021 gaaacaatgg agccgccatt ttcgcgacga ccgcgatcag cagaccgacg gcagctgcgg
     1081 tgatgccggc caggatacgg ccaagcactt caagatcgcc gaagcgcgca tagagaaaag
     1141 caaggatggt gacgatgatc agcggcggcc ccatcaggcc ggcgagcgcg accgcggcac
     1201 ccggtgcacc gccaaagcgc gatccaaaaa cgacggagaa attgacgacg ttggggcccg
     1261 gcaggaactg tgacagggca aaggcctcgt tgaattgctc tgccgtcatc caccggcgtt
     1321 gttcgacgat cattcgccgc gcccacggaa gcgcgccgcc gaatccggaa atcgagacga
     1381 tgacaaatgc gcgaaacagt tcagacagag tggggcgatt aacgggtggc gcggccgcgc
     1441 ctgcggaagc ggacatgacg acgaaattta tcccggccgg acaagaccga ctagggcacc
     1501 gatagcgcga ccccaatgcg gctccggaat agcgttgggc ctcggttcgc tgaacatcga
     1561 atgttcacga tgtcgtgcca taagcggcgg cgatcccagt ggaggtggtc ttggctgcgc
     1621 gccccgttct gatcgcccag atttccgacc tgcacatcac gcgtccaggc gtgttggctt
     1681 acgatcgcgt cgataccgcg gcggcgccgc tgcgctcgat cgatacgctg aacgccatgt
     1741 cgccggaggc agacctcgtg gtgatttcgg gcgacatcgc cgattcagcg ctgccggaag
     1801 aatatgagca tgcaaggacc ttgctcggcg cgttgcaaat tccgttgccg tgatccctgg
     1861 caaccacgat cgccgaacgc caatgcgaaa gatctttccc ggttcatcct atgggccggg
     1921 agacagtcgc gctcaattcc acgaggagcg
//
LOCUS       DATDHO010000397         4021 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_415582, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000397 DATDHO010000000
VERSION     DATDHO010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415582"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..894)
                     /locus_tag="VIY07_07670"
     CDS             complement(<1..894)
                     /locus_tag="VIY07_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6381669.1"
                     /translation="MAELVGISALLLVFLTVLLAGGVWIAMALMATGYVGMQFIGGGI
                     PSGPVLATTIWGNSNSWTLAALPLFIWMGEILFRTRLSEEMFRGLAPWLNRIPGRLMH
                     VNVLACGIFGSVSGSSAATCATVAKIALPELKKRGYDEMVSLGSLAGAGTLGILIPPS
                     ITMVVYAVAANVSIIQIFLAGFLPGFLVMALYSGYIAGWSLANPEKTPPPEPPMTFRE
                     KLHESRQLIPLALLILLVFLSLLLGWATATECAAWGVMGSLAIAWWHNALTWESFWAS
                     VMGTVRVNCMIMLILAGASYMS"
     gene            complement(896..1441)
                     /locus_tag="VIY07_07675"
     CDS             complement(896..1441)
                     /locus_tag="VIY07_07675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY6381670.1"
                     /translation="MIRVFLDRLYLFAGYAAGGFLLAIFVLMMLLSAGRPLGLNIPAG
                     DDLVSWCMVATSFLGLAHTFRHGEMIRVGLLIDRLEGRTRHVVEIAALLIGGFFVAFF
                     AYYATLLTYDSWRFHDMAQGVLPVPLWIPQLGYSGGLLILLVAFIDELIHVVRGNPPR
                     YEKPKPKTAEEVVEQAIQSGV"
     gene            complement(1531..2280)
                     /locus_tag="VIY07_07680"
     CDS             complement(1531..2280)
                     /locus_tag="VIY07_07680"
                     /inference="COORDINATES: protein motif:HMM:NF024921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY6381671.1"
                     /translation="MTWMKILCAFVVVSLGAASFSQAAEIKVLSGNGPKAAVRELCAQ
                     FEKATGNTIDLRFGVNVDVKKKIEGGERFDVVIGNPPIIDALIKDGAVIGPRADIGRS
                     GLGVAVRAGETKPDIATVDSFKRTLLAAKAVAYPGRGASGIYFVSLLERLGIKGEMQG
                     KLKPMEAEDTVEVVARGEADMVVVVATRISDVPGVELVGPIPEELQTKIGFAAGLATS
                     AKDSEPAKALVRFLTAPAAAVTLRAKGVDPI"
     gene            2364..>4021
                     /locus_tag="VIY07_07685"
     CDS             2364..>4021
                     /locus_tag="VIY07_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007879426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEY6381672.1"
                     /translation="MPKQSSPRLWDFWIDRGGTFTDVVGRRPDGTLVAHKLLSENPEA
                     YADAAVQGIRNLLGLTSGEEIPSGRVGAVKMGTTVATNALLERKGERTLLLVTKGFRD
                     AFKIGYQARPKIFARQIIKPDMLYERVIEVDERVRADGTVEQEPDLDALRADLEGAKW
                     TGIKGVAIVFMHAYRFPEHEKRVAALAREMGFAQVSVSHEVSPLIKLVGRGDTTVVDA
                     YLSPILRRYVAQVDKDLDTKRSAARLMFMMSSGGLTAASLFQGKDAILSGPAGGVVGM
                     AETGRQAGFDHLIGFDMGGTSTDVSHFEGEYERAFETEVAGVRMRAPMMLIHTVAAGG
                     GSVLHFDGARFRVGPDSAGANPGPTCYRRGGPLAVTDANVMVGKLIPDYFPKIFGPAQ
                     NLPLDAQAVRNAFADLAQQVGGRTAEGVADGFIKIAVENMANAIKKISVQRGYDVTRY
                     ALNCFGGAGGQHACLVADALGMTRVLMHPFSSLLSAYGMGLADIRATREQAIELPFGK
                     KALQMIARVGKSLGKTTKAEVAGQGVSAGKIRIFVRAHIRYAGT"
BASE COUNT          828 a         1237 c         1226 g          730 t
ORIGIN      
        1 cgacatgtag gacgcgcccg ccaggatcag catgatcatg cagttgacgc gaaccgttcc
       61 catgacgctg gcccagaagg attcccaggt cagggcattg tgccaccagg caatggccaa
      121 cgatcccatc acgccccagg ccgcgcactc ggttgcggtc gcccagccca gcagcaacga
      181 aagaaagaca agaaggatga gcaaagccag cggaataagt tgcctggatt cgtgcagctt
      241 ctcgcggaaa gtcatcggcg gttccggcgg cggcgttttt tccggattcg cgagcgacca
      301 gccggcgatg tagcccgagt aaagcgccat caccagaaag cccggcagga agccggcaag
      361 gaatatctgg atgatcgaaa cgttggcggc gaccgcgtag accaccatgg tgatcgacgg
      421 cggaatcaga attcccagcg tgccggcgcc ggcaagcgag ccgagggaaa ccatttcgtc
      481 gtagccgcgc tttttcaact ccggcaaggc gatcttggcg acggttgcgc aggtggcggc
      541 cgaggagccg gacacggagc caaaaatgcc gcacgccagc acgttcacgt gcatcaggcg
      601 tcccggaatt ctgttgagcc acggcgccaa gccacgaaac atttcctccg acaacctggt
      661 gcggaacagg atttcaccca tccagatgaa aagcggcagc gccgccaatg tccacgagtt
      721 gctgttgccc cagatggtgg tggcaagaac cgggccggac ggaatgccgc cgccaatgaa
      781 ttgcatgccg acatacccgg tcgccatcag agccatggcg atccatactc cgcccgcgag
      841 caggaccgtc agaaagacaa gcagcagcgc cgagatgccg accagttcag ccatctcaaa
      901 caccgctctg aatagcctgc tcgacaacct cttcggccgt cttcggcttc ggcttttcgt
      961 atcgtggtgg attgccgcgc acgacgtgga tgagttcgtc gataaaggcg accagcagaa
     1021 tcaataagcc gccgctgtat ccgagctgcg gaatccacag cggcacaggc aatacacctt
     1081 gagccatgtc gtgaaagcgc caggaatcgt aggtcagcag cgtggcgtaa taggcaaaga
     1141 aagcgacgaa gaacccgccg atcagcagcg cggcgatttc gacaacgtgg cgagtgcgac
     1201 cttccagccg atcgatcaga agtccgaccc ggatcatctc gccgtgacga aacgtgtgcg
     1261 ccagcccgag aaatgacgtc gccaccatgc accaggagac aagatcgtca ccggcgggaa
     1321 tattcagccc caagggacgg ccggccgata gcagcatcat caagacgaag atggccagca
     1381 ggaagcctcc cgcggcatag ccggcgaaga gatacagcct gtcgagaaaa acgcgtatca
     1441 tgcgcgatcc ccctagcgca tgatgacgcg gggcttggtt cgcaggcaat agtctttgga
     1501 aatgcgctgt ttcgacttgg gacaggcgcg tcaaatcgga tcgacaccct tggcgcgcag
     1561 cgtcactgcc gcagcagggg cggtcagaaa gcggaccaaa gcctttgctg gctcggagtc
     1621 ttttgccgag gttgccaggc cggcggcgaa tccgatcttc gtttgcagtt cttcagggat
     1681 cggtccaaca agctcgacgc ccgggacgtc ggaaatgcgc gttgcgacca caacgaccat
     1741 gtcggcttcg ccacgcgcga caacctcgac cgtgtcctct gcttccatcg gcttgagctt
     1801 gccttgcatt tcccccttga tccccaggcg ctcgagcagg ctcacgaaat atatgccgct
     1861 ggctcctctg ccggggtagg cgaccgcctt cgccgcgagc agcgtgcgtt tgaatgagtc
     1921 gactgtggca atgtccggtt tcgtctcgcc cgcacgtacc gcgacgccga ggccggaacg
     1981 gccgatatcg gcccgtggcc cgatgactgc tccgtccttt atcagcgcat cgataatcgg
     2041 gggattcccg atcaccacat cgaagcgctc gccgccttcg atctttttct tgacatcgac
     2101 gttgacgccg aagcgaagat cgatcgtgtt cccggtcgcc ttttcaaact gcgcgcaaag
     2161 ctcgcgcacc gccgcctttg gaccgttgcc gctgagtact ttgatttccg ccgcctgcga
     2221 gaacgacgcg gcgcccaacg acacaaccac aaatgcgcac aatatcttca tccaggtcat
     2281 caacttttcc cccgactgag cctagcaggc ttgttttgac cccgacaggc cggacatagt
     2341 ggtgttttcg cgccgccaag ctcatgccca aacaatcttc accacgcctc tgggacttct
     2401 ggatcgatcg cggcggcacc tttaccgacg tggtcgggcg gcgcccggac ggcacactgg
     2461 tcgcccacaa gttgctgtca gagaatccgg aggcctatgc cgatgcggcg gtgcaaggca
     2521 ttcgcaattt gcttgggctc acctcgggcg aggaaatccc gtcggggcgt gttggcgcgg
     2581 tgaagatggg caccactgtc gccaccaacg cccttctcga acgcaagggt gaacgcacac
     2641 tccttcttgt gacgaagggc ttccgtgacg ctttcaagat cggctatcag gcgcgcccga
     2701 agattttcgc gcgtcagatc atcaagcccg acatgctcta tgagcgtgtc atcgaagtag
     2761 atgagcgcgt gcgcgcggac ggcacggtgg agcaggaacc ggacctcgac gccctgcgag
     2821 ccgatctcga aggcgcgaaa tggaccggca tcaagggcgt ggcgatcgtg ttcatgcacg
     2881 cttatcgctt tccggagcac gagaaacgtg tcgccgcgct cgcgcgtgaa atgggctttg
     2941 cgcaagtttc ggtgagccat gaggtctccc cgctgatcaa gctggtcggc cgtggcgaca
     3001 ccacggttgt ggatgcctat ttgtcgccga tccttcgtcg ttacgtggcc caggtggaca
     3061 aggacctcga cacaaaacgc tctgcagcgc gtctgatgtt catgatgtcg tccggcggac
     3121 tgacggccgc cagtctgttc cagggcaaag atgcaattct ctccgggccc gcgggcggag
     3181 tcgttggaat ggcggaaacc ggacggcaag ccggtttcga tcacctgatc ggcttcgata
     3241 tgggcggcac ctcgaccgat gtgtcccatt tcgagggtga gtacgaacgc gcgttcgaaa
     3301 ccgaagttgc cggcgtgcgg atgcgcgcgc cgatgatgct cattcatacg gtggcggcag
     3361 gcggtggttc ggtcctgcat ttcgatggag cacgtttccg tgtcgggcct gattccgcgg
     3421 gcgccaatcc cgggccgaca tgttaccgac gcggaggtcc attggccgtc accgacgcga
     3481 atgtgatggt cggcaagctt atcccggatt acttcccgaa gatcttcggc cctgcgcaga
     3541 atctaccgct cgacgcgcaa gccgtgcgca atgcgttcgc ggacctggcg cagcaggtcg
     3601 ggggccgcac ggcggaaggg gttgccgacg gattcatcaa gatcgccgtg gaaaacatgg
     3661 caaacgccat caagaagatc tctgtgcagc gtgggtatga cgtcacgcgc tacgcgctca
     3721 attgcttcgg cggcgccggc ggccagcacg cgtgcctggt cgccgatgcg ctcggcatga
     3781 cccgcgtgct catgcatccg ttctcgtcgc tgctgtcggc ctatggcatg ggtctggccg
     3841 acatccgcgc cacacgcgaa caggcaatcg agttgccctt cggcaagaag gcactgcaga
     3901 tgatcgcgcg cgtcggcaag tcgcttggca aaacgacaaa agccgaagtt gccggccagg
     3961 gcgtgtcggc gggcaagatc aggatattcg tgcgcgcgca tatacgctac gcgggtaccg
     4021 a
//
LOCUS       DATDHO010000398         2406 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_267590, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000398 DATDHO010000000
VERSION     DATDHO010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2406
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_267590"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            154..1212
                     /locus_tag="VIY07_07690"
     CDS             154..1212
                     /locus_tag="VIY07_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY6381673.1"
                     /translation="MTKKFTKRDVLRGAGALGFSAFAVRVAAAPAAEAVTSALIETAK
                     KEGRVSFYTAMDLEFAERLGKAFEAKYPGIAVRVERSGAERVFTRIAQEYSSNIRAVD
                     VVNTSDQAHCIIWKRNDWLAPYLPEEVVKHYDKRYYDPDGLHVTTRILISPLAYNTNL
                     VKKEDAPKGFKDLLDPKWAGKLVKAHPAYSGTIMNATFEIARDLGWDYFVKLATQNVM
                     QVQSATDTPKRISIGERAVMVDGAGYLVIRYKEAGQPVDIIYPEEGTPLATGPSAVFR
                     GAPNPNAARLFQNWMHSREAQQILVDYARQYSPHSQTVEKPGVRRLADIRLMKEDPEG
                     LLSQAETVKKRYSEIFKV"
     gene            complement(1385..1618)
                     /locus_tag="VIY07_07695"
     CDS             complement(1385..1618)
                     /locus_tag="VIY07_07695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381674.1"
                     /translation="MKTVVLTLAVLLSATTISFAQSLPNFGPNAPWYGDSYGKPVSGT
                     YPPVGYGGYAYQPYRHYHQRRYGHRYRHYRYWW"
     gene            1926..>2406
                     /locus_tag="VIY07_07700"
     CDS             1926..>2406
                     /locus_tag="VIY07_07700"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY6381675.1"
                     /translation="MRRRDFIKFLGGAAAGWPLAAHAQQSTGRRRIGALMNIAENDPQ
                     SLVWASAFERGLRERGWTLGNNLQVEYRWANDENLYRRFAHELVALSPEVVLAVSGSS
                     ATALQEATKTIPVVFMGTSDPVNRRLIAALEKPGGNFTGFIEFESSIGGKWLELLKLI
                     "
BASE COUNT          539 a          669 c          729 g          469 t
ORIGIN      
        1 cgtcaaccga ttgttcgcgg tcagcaatga tgagttgccg ccctgtctcg aaggcgaccg
       61 ccgacgaatt cacgctagct cggtgacctt actgtgccga ccttccgggt ctaaggtacg
      121 acccctttgg cctagggaaa gatcgaggac gccatgacca aaaagtttac gaaacgtgat
      181 gtgcttaggg gcgctggggc gcttggcttc agcgcctttg cagttcgggt cgctgcggcg
      241 cctgcagcgg aagcagttac gtcggccttg atcgagacgg cgaaaaagga aggcagggtt
      301 tcgttttata cggcgatgga cctggagttc gctgaacggc ttggcaaggc attcgaggca
      361 aagtaccccg gcattgccgt gcgcgtggag cgatccggtg ccgagcgtgt ctttactcgc
      421 atcgcacagg aatattcctc caacatccgc gccgtcgacg ttgtcaacac gtccgaccag
      481 gcccattgca tcatttggaa acgcaacgac tggctcgcgc cgtacctgcc ggaagaggtc
      541 gtgaagcact acgacaagcg ttactacgac cccgacgggc tgcatgtaac gacacgtatt
      601 ctgatctctc cgctcgccta caacaccaac cttgtaaaga aggaagatgc gccgaaaggc
      661 ttcaaagacc tgctcgatcc gaaatgggcg ggtaagttgg tcaaggcgca tccggcctat
      721 agcggcacga tcatgaatgc gacgttcgag atcgcgcgcg atctgggctg ggactatttc
      781 gtgaaactgg cgacgcagaa tgtcatgcag gtccagtcgg ccaccgacac gccgaagaga
      841 atttcgatcg gcgaacgcgc ggtcatggtg gatggcgcag gctacctcgt catccgctac
      901 aaggaggcgg gtcaaccggt cgacataatt tatcctgagg agggtacccc gctcgccacc
      961 ggcccaagtg cggtctttag gggcgctccc aatccgaacg ccgcgcgcct gtttcagaac
     1021 tggatgcact cgcgtgaggc gcagcagata ctcgtcgact atgcccgcca gtactcgcca
     1081 cattcccaga ccgtggaaaa gcccggcgtc cgcaggctcg cggacatcag gctgatgaag
     1141 gaggatccgg aaggtctgct ttcgcaggcg gagacggtca agaaacggta ctcggaaatt
     1201 ttcaaggtgt gatgacaaac tgttcgctcg cggaggcgag gcgatcaaac gggcatgcgg
     1261 cgttatccac cactggccct tgcgggactt tccagacgtg cagccaatgg gagcaaagcc
     1321 gacaccactt cgaccttgcc cagcgcccgc ccgttagtaa gcgctgcact tattcaaagc
     1381 tctgtcacca ccagtatcga taatgccgat atcggtggcc ataacgacgc tgatgataat
     1441 gccggtatgg ctggtacgca tatccgccat aacccacggg agggtaggtg ccgctcaccg
     1501 gtttgccgta actgtcgccg taccaaggcg cgttggggcc gaagttcgga aggctttgcg
     1561 cgaacgagat agtcgtcgcg ctcaagagca ccgccaatgt caaaacgacc gtcttcatgg
     1621 tccaattctc cgatgtcgat taatcagaga accggaaaag ccgcggttgt gttcctgagg
     1681 tttgccgagt tctcgaaaca gagcggtgcg gctcaagttc cctagaaagg ccgcgtacga
     1741 gaacgggcgt tgaaggcacc gcgtccgcgt cacgtcggca tatcgagcgc gacaaggtgg
     1801 attcacgcga tgccgcagaa tgtccgctaa tgacccaaga cgggcatcga cctgtgccca
     1861 agccccttcc agcgggccag caagaagagg tagaatgata cgggtttaga cttgggagct
     1921 gggggatgag acggcgcgat ttcattaaat ttctcggcgg agcggcggcc gggtggccgc
     1981 ttgctgcgca cgcgcaacaa tccacgggga ggcggcggat cggcgcgctt atgaacatcg
     2041 ctgaaaacga tccgcaatca ctcgtctggg cttcggcttt cgagcgcggt ttgcgggaac
     2101 gaggctggac actcggaaac aacctgcagg tcgaatatcg ctgggccaac gacgaaaacc
     2161 tttacaggag atttgcgcac gaactggttg cacttagtcc cgaggttgtt ctggctgtga
     2221 gcggatcaag cgcaactgcg ttgcaggagg cgaccaagac gattcccgtc gtattcatgg
     2281 gaaccagtga tccggtcaat cgcagactga tcgccgcctt ggaaaaacca ggcggcaact
     2341 tcacggggtt tatcgagttc gaatccagta taggcggaaa gtggctggag ttacttaagc
     2401 taattt
//
LOCUS       DATDHO010000399         3608 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_19537, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000399 DATDHO010000000
VERSION     DATDHO010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3608
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19537"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..766
                     /locus_tag="VIY07_07705"
     CDS             <1..766
                     /locus_tag="VIY07_07705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEY6381676.1"
                     /translation="PAVIATGADAAQIKALYEGIVYEEVPLSSMRRTIATRLVEAKQT
                     VPHFYLTTDLDVGRLMAMREEANAAAPKSKDGQLAFKLSLNDFVIKAWAAALQRIPAA
                     NAVWAGDRILQFRNSDIGVAVALDGGLITPVIRNVETKSLTAISAEMRDLADRARHKK
                     LRPNEYQGGSSAISNLGMYCVREFSAIINPPHATILAVGATRRAPIEAVDGSVKFISQ
                     MTVTLSCDHRVVDGGLGAELLAAFKKFVEAPVTALV"
     gene            782..1756
                     /locus_tag="VIY07_07710"
     CDS             782..1756
                     /locus_tag="VIY07_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEY6381677.1"
                     /translation="MAGDKPDVLLVGAKKPVMMKGFEGKVTLHHWLDAKDKAAFIKEV
                     GDKIKAIAIAYTANKVDGNFLRQFPNLEQVSSFGVGYDHIDAKWAGDQGIVVTNTPEV
                     LNEEVADTALGLLLCTVREFPQSDRYLRAGKWKEAHYPLTKATLRDRTVGMVGMGRIG
                     KAIARRLEAFGMPIVYHSRNQQPGVNYKYYPKLLDMARDVDTLMVIVPGGAGTKNMIT
                     AEVLKALGPRGVLINMARGSVVDESALIEALQNRTIYSAGLDVFANEPEVPKELIAMD
                     HIVLFPHLGSSTEATRAAMDQLVVDNVLAWAAGKPPLTPVPETPWPPK"
     gene            1797..2480
                     /locus_tag="VIY07_07715"
     CDS             1797..2480
                     /locus_tag="VIY07_07715"
                     /inference="COORDINATES: protein motif:HMM:NF014968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AprI/Inh family metalloprotease inhibitor"
                     /protein_id="HEY6381678.1"
                     /translation="MIRLAIGLATVCLSGVALAHPAGLNESAKRLIGSWEFSNADRDR
                     ICTATFKSDSTPVGFKVEFDANCANLFPLVRDITAWKFPENDLLYLLDARGRTLVEFS
                     EVEDSIFEAPTPGVGVLFLQNAAAAGAAPRPPEQFAGDWAIVRKAGPPVCGLTLAMTK
                     ASDGFAVTVKPGCEQAIARLNFAQWRIDRDQIMLVPSRGNPWRFEEVDNTTWRRVPES
                     ADQITLVRQ"
     gene            complement(2484..3206)
                     /gene="radC"
                     /locus_tag="VIY07_07720"
     CDS             complement(2484..3206)
                     /gene="radC"
                     /locus_tag="VIY07_07720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEY6381679.1"
                     /translation="MTNKIAKKGRAAGLSEAPPHYHGHRERLRDRFRQAGAEAVSDYE
                     LLELVLFRAIPQRDVKPLAKDLISKFGSFPEVIAAPPARLAEIKGIGDAAITELTVVH
                     AAPSRMARDQVQKRPVLSSWSSVIDYCRTAMAFAEKEQFRVLFLDKRNQLIADELQQV
                     GTVDHTPVYPREVVKRALELSATALILVHNHPSGDPTPSHADIQMTQTIIDVARPLGI
                     AVHDHIVVGKEGHASFKSLRLI"
     gene            complement(3305..>3608)
                     /locus_tag="VIY07_07725"
     CDS             complement(3305..>3608)
                     /locus_tag="VIY07_07725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011438960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEY6381680.1"
                     /translation="SVVRDFCGHGLGRLFHDEPNVVHVGRPGEGIVLKPGMFFTVEPM
                     INLGRPHVKVLSDGWTAVTRDRSLSAQFEHTVGVTNDGVEVFTFSPAGLHKPPYKR"
BASE COUNT          732 a         1061 c         1096 g          719 t
ORIGIN      
        1 tccggctgtc atcgccacgg gcgccgacgc agcccagatc aaggccctgt acgaggggat
       61 cgtttatgag gaagttcctc tcagctcgat gcgccggacc atcgccacgc gcctggtcga
      121 ggcaaagcaa accgttccgc acttctatct cacgaccgat ctcgacgtcg gccgcctgat
      181 ggcaatgcgt gaggaagcga atgcagctgc gccgaaaagc aaagacggcc agctggcgtt
      241 caagctgtcg ctcaacgatt tcgtcatcaa ggcctgggct gcggcgctgc agcgcattcc
      301 cgctgccaat gcagtttggg ccggcgatcg cattctgcag ttccgcaatt ccgatattgg
      361 cgtggccgtt gccctcgacg gcgggcttat caccccggtt atccggaatg tcgagacaaa
      421 atcgctgacc gcaatttcag ccgagatgcg cgatctcgcg gatcgcgcgc ggcacaagaa
      481 gctcaggcca aacgaatatc aaggtggctc gagcgccatc tccaatctcg gcatgtattg
      541 cgtgcgcgaa ttttccgcca tcatcaatcc gccgcacgca acaattctcg ccgtcggtgc
      601 gactcgccgg gcgccgatcg aggcggtgga cggcagcgta aagttcatca gccagatgac
      661 cgtcactttg tcgtgcgacc accgggtcgt cgacggtggg cttggggctg aattgctcgc
      721 ggcgttcaaa aaattcgtcg aggcgccggt gacggcgctg gtttaggcag gagatcacga
      781 aatggctggc gataagccgg atgtactatt ggtcggtgcc aagaagccgg tgatgatgaa
      841 gggcttcgaa gggaaggtca cgcttcacca ctggctcgac gccaaggaca aggcggcctt
      901 tattaaggaa gtcggcgaca agatcaaggc aatcgcgatt gcctataccg ccaacaaggt
      961 cgacggaaac ttccttcggc aattccccaa cctcgagcag gtctcgagct ttggcgtcgg
     1021 ctacgatcat atcgacgcaa aatgggcggg cgatcagggc atcgttgtca ccaacacgcc
     1081 cgaagtgctg aatgaagagg tcgcggacac cgcgctcggt ctgttgctct gcaccgtgcg
     1141 ggaattcccc cagtcagatc gttaccttcg cgccggcaaa tggaaggaag ctcactatcc
     1201 gctcacaaag gcgacgctgc gcgatcgtac ggttggaatg gttggaatgg ggcgaattgg
     1261 caaggcgatc gcgcggcgcc tcgaagcgtt cggcatgccg atcgtgtacc acagccgcaa
     1321 ccagcagccg ggcgtcaact acaagtatta tccgaagctc ctcgacatgg cgcgcgacgt
     1381 cgacacgctt atggtgatcg tgccgggcgg cgccggcacc aagaatatga tcactgccga
     1441 agtgctcaag gcgctcggtc cacgcggtgt cctgatcaac atggcgcgtg gctcggtggt
     1501 cgacgagtct gccctgatcg aggctctaca aaatcgcacg atttactctg ccggccttga
     1561 cgtgttcgcc aacgagcccg aggttcccaa ggaattgatc gcaatggacc acatcgtgtt
     1621 gtttcctcat ctcggctcat cgaccgaggc gactcgtgca gcgatggatc agctggtagt
     1681 agacaacgtt ctggcctggg ccgcgggcaa gcctccgctc acgccggttc ccgaaacgcc
     1741 atggccgccg aaatgacagg cgagcggcca acaagcccgg gtgctatagt ctgtccatga
     1801 tccgtcttgc gatcggtctt gcgacggtct gtctcagcgg cgttgcgctt gcgcaccccg
     1861 cgggtctcaa tgaatcggcc aagcggctga tcggcagctg ggaattttcc aatgccgatc
     1921 gtgacaggat ttgtaccgcc accttcaaaa gcgattcaac tccggtcggc ttcaaagtcg
     1981 aattcgacgc caactgcgcg aatctgttcc cgctggtccg tgacattacc gcatggaagt
     2041 tccccgaaaa tgatctgctt tatctgctcg atgcgcgcgg cagaaccctc gtcgaattca
     2101 gcgaggtcga agacagcatc ttcgaggcgc cgacgcctgg cgtcggcgtg ctgtttctgc
     2161 aaaatgcggc cgcagcgggg gcggcaccaa gaccgcccga acagttcgcc ggcgattggg
     2221 cgattgtgcg caaagctggc ccgccagttt gtggcctgac tctggcaatg acaaaggcca
     2281 gcgacggatt cgccgttaca gtcaagcctg gctgcgagca ggcgattgct cgtctcaatt
     2341 tcgcgcaatg gcgcatcgac cgcgaccaga tcatgctggt gccatcacgc ggcaatccgt
     2401 ggcgcttcga ggaagtcgac aacacgacat ggcggcgcgt gccggagagc gccgatcaga
     2461 tcacactggt gcggcagtag ctctcagatc aaccgcaggc ttttgaagct cgcgtggcct
     2521 tctttgccga ccacgatgtg gtcgtgcact gcgatgccaa gtggtcgggc aacatcgata
     2581 atcgtctgcg tcatctggat gtcggcgtgc gacggcgtcg gatcgcctga tggatgattg
     2641 tgcaccagga ttaatgcagt cgcggagagc tcaagcgcac gcttgaccac ctcgcgcggg
     2701 tagactggcg tgtgatcgac agtgccgacc tgttgcagtt catcagcgat caactgattg
     2761 cgcttgtcga ggaagagaac acgaaactgc tccttctcgg cgaaagccat cgccgtgcgg
     2821 cagtagtcga tcacactcga ccaggatgac agcaccggcc gtttttgaac ctggtcgcgc
     2881 gccatgcggc ttggggcggc atgtacaacc gtgagctcag tgatggcggc gtcgcctatg
     2941 ccttttattt ccgcaagccg ggccgggggc gccgcaatga cttcggggaa ggatccgaat
     3001 ttcgagatga ggtctttggc cagcggtttg acgtcgcgtt gcgggatggc gcggaacagc
     3061 acgagctcca gcaactcgta atcgctcact gcttcggcgc cggcctgccg gaagcggtcg
     3121 cgcagccgtt cccgatggcc gtgatagtga ggtggcgcct cggaaaggcc ggccgcccgg
     3181 ccctttttgg caatcttgtt cgtcatgaat gtatcggcta ttgactgcac gtaatacttg
     3241 taattcttta taagcacaac tcaagcctga agcttgtttt cgcgggggag aaaaggggta
     3301 ggctttagcg cttatacggc ggcttatgca ggccggcggg tgagaatgta aacacttcga
     3361 cgccgtcgtt ggtaacccca actgtgtgtt cgaactgcgc tgacaaagat cgatcgcgcg
     3421 tgaccgcggt ccatccgtcg gacagcacct tcacgtgcgg gcggccgaga ttgatcatcg
     3481 gctcgacagt gaaaaacatt cccggcttca gaacgattcc ttcacccggt cgtccgacgt
     3541 gcaccacatt gggctcatca tggaacagtc ggccgaggcc atgcccgcag aagtcgcgca
     3601 ccacgctc
//
LOCUS       DATDHO010000400         4859 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_316516, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000400 DATDHO010000000
VERSION     DATDHO010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4859
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316516"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..981)
                     /locus_tag="VIY07_07730"
     CDS             complement(<1..981)
                     /locus_tag="VIY07_07730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381681.1"
                     /translation="MAGGNTTVERLRQFLRELSPSAHSMLVGELERSVLRGHEVAGAD
                     LVLQELRRILREQRDDVHNIDQSAQLLFKPLEPFLVDDRGDHQHPGRVARSSLEALWN
                     WVRRDLLPDDANSMTLDVGKAMLDGDQAKIERLTRIFQDRVAAAIEASYSAAAEDGRL
                     RRRLLQQIGTPRAAEEIAALKCALKGRDVLASLASRLPLQIGNLANDQLDECQALIEG
                     AAARDGELFLYALLTVMSRMTAPWQLIRLGVKAAGSDTAARVAETNYGVAVNIVIAEL
                     ERMVAELREDLRTGQGIAVRSLLKTIHDSARGLRTELALPVDSTWGRTLAA"
     gene            complement(1280..1786)
                     /locus_tag="VIY07_07735"
     CDS             complement(1280..1786)
                     /locus_tag="VIY07_07735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RT0821/Lpp0805 family surface protein"
                     /protein_id="HEY6381682.1"
                     /translation="MPTPRFAAVAVIGLTLAACASGPDVSPGPGPAAGPKETGGTLVG
                     AGTGALLGAAVAGGGTGSRIAGAAIGGVLGGLIGNRIGAALDDEDKQRAYAAQMDALE
                     RGQSGAPVSWRNPDSGRYGTVVPGPAYQQAGRNCRSFTHTIYIDGQPQTARGTACRNP
                     DSTWTAVG"
     gene            complement(1895..3277)
                     /locus_tag="VIY07_07740"
     CDS             complement(1895..3277)
                     /locus_tag="VIY07_07740"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEY6381683.1"
                     /translation="MRANSLALRLFLSATAWTVIILLITGIVLSSLYRQAVERAFDRR
                     LGVYLRTLVADVASPEEGSEKFPQSLGEPLFELPLSGWYWQVTRLDGPKGEVRASRSL
                     WDGGLPHLQDHGIAAGPNGSREGYVSGPEDQRLRLVERNIDLGDEGRYLVAIAGDAAE
                     ISDEMRSFDQALIITFSILAAVLLLTAVFQVRFGLAPLKRITDDLAAIRSGSSERLTG
                     TFPEEIAPLARETNALIEANRQIVERARTHVGNLAHALKTPLSVMVNEATTRDGEPFA
                     EKVLEQADIMRDQVARHLERAHLAARATVVGSVTEVKPVVTALARTMEKIHRDKNLTI
                     DVHADESAQFQGERPDLEEMMGNLVDNACKWATSRVSIEVVCEATDRVNDRQAIRMIV
                     DDDGRGLSPSEREQVAKRGQRLDETKPGSGLGLSIVVELAALYGGSLTLGTAPLGGLR
                     AELVLPATPT"
     gene            complement(3282..3950)
                     /locus_tag="VIY07_07745"
     CDS             complement(3282..3950)
                     /locus_tag="VIY07_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY6381684.1"
                     /translation="MRLLVIEDDPDLNRQLATALTDAGYVVDRAFDGEEGHYLGESEP
                     YDAVILDIGLPKMDGISVLEAWRRTGRAMPVLMLTARDRWSDKVQGFDAGADDYVAKP
                     FHLEEVLARVRALLRRSAGHAKSEFNCGPVRLDTRTGRVSVNGNPVKLTSHEYRLLAY
                     LMHHTGRVVSRTELVEHLYDQDFDRDSNTVEVFVGRIRKKLGVEIIQTVRGLGYLLTP
                     PDAR"
     gene            complement(3966..4166)
                     /locus_tag="VIY07_07750"
     CDS             complement(3966..4166)
                     /locus_tag="VIY07_07750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381685.1"
                     /translation="MDDHRAISLGQAIKSLRQHRKYSEVVRARLCRKDDKLVYVLTLL
                     GRSGKVVDVTVDAINGEFNAGS"
     gene            complement(4346..>4859)
                     /locus_tag="VIY07_07755"
     CDS             complement(4346..>4859)
                     /locus_tag="VIY07_07755"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEY6381686.1"
                     /translation="DLKAALAPRMATELPKGEGTDYTIYPEPLTAPYRERRFTVGELL
                     YRSIKVSREDKSARYRQYARNYQFFGAPVALFFAREKDHGPAQWADIGGFLQTVALLA
                     RGYGLHTCPQQAWVSFHRTVRAFLRLPDNLMIYSGMALGYEDRAAPINSWRSPRAVMD
                     AFASFEGFES"
BASE COUNT         1035 a         1439 c         1409 g          976 t
ORIGIN      
        1 tgccgcgagc gtacggcccc atgtgctgtc caccggcagc gccagctcgg tgcgcaggcc
       61 gcgtgccgaa tcgtggatcg tcttgagcaa cgagcggacc gcaatgcctt ggccagtgcg
      121 cagatcttct cgcaactcag caaccattct ttcaagttct gcgataacaa tgtttacggc
      181 aacaccataa tttgtttccg caacacgcgc agcagtgtcg ctacctgcgg ccttcactcc
      241 aagtcggatc agttgccatg gcgcggtcat tcggctcata actgtcagca atgcatacag
      301 aaacaactca ccatcacgcg cagcggcacc ctcgatcaat gcctgacatt catcgagctg
      361 gtcattggcc aaattaccga tctgcaatgg caaacgggaa gcaagcgatg cgagaacgtc
      421 ccgccctttg agagcgcatt tgagtgcggc aatttcttcg gctgcgcgtg gcgtgccgat
      481 ttgttgcaaa agccgtcttc gaagtcttcc atcctctgcc gcggcagaat aacttgcctc
      541 gattgccgcg gcgacccggt cttgaaaaat gcgggtgagc cgttcgattt ttgcctggtc
      601 accgtcgagc attgccttgc cgacatccaa agtcatcgaa ttggcatcgt ccggcaagag
      661 atcgcgccga acccaattcc acaatgcttc gagcgaggag cgcgcgacgc gacccggatg
      721 ctggtgatcg ccgcgatcgt cgacgagaaa cggctcaagt ggcttgaaga ggagttgagc
      781 agactggtcg atattatgaa cgtcgtcacg ttgctcgcgt aagatgcggc gcaattcctg
      841 caagacaaga tcggcgcccg cgacctcatg gccgcgaagc acgcttcgct cgagctcacc
      901 gaccagcatc gaatgcgcgc tgggcgaaag ttcgcgcaga aattgccgca gccgctcgac
      961 ggtcgtgttg ccgcccgcca tcccggtaat ccgaattcaa gccttggctt gatacggcgc
     1021 gtcgcgttaa ggctctatta atcgtagatg tcgcccagcg atttgttttt attggttttt
     1081 tggttgtgcc aacttttgca aactgacgac acggtcattt agctggtctt tggggggact
     1141 gctcgccgca atcctgctgc taaacgcctt tgatgtgatt gtgacttacc agcatgagtc
     1201 ggtggtgaga acgtcctgga tcaatttgat ccccagacct taccgcgatt acaactgatg
     1261 tccgtgctta ccgggaagat cagccgaccg ctgtccaggt gctgtccggg ttgcggcagg
     1321 ccgtgccgcg agcggtctgt ggctgaccgt caatatagat cgtgtgagtg aatgaacggc
     1381 aattgcgacc agcctgctgg tatgccggtc cagggacgac agtgccatag cgaccggaat
     1441 cgggatttcg ccaggatact ggagcgcctg attggccacg ttccaacgca tccatttgcg
     1501 ccgcgtaagc gcgttgcttg tcctcatcgt cgagggccgc cccgatgcga ttgccgatca
     1561 atccgcccaa gaccccgcca atcgccgcac cagcgattcg acttcccgtt cccccacctg
     1621 ccaccgccgc tcctagcaag gcgccggtgc cagcccccac cagggttccg ccggtctcct
     1681 ttggacccgc cgccggtcct ggccccgggc tcacgtccgg gccggaagcg caggcagcga
     1741 gagtaagacc gataaccgca acagcagcga acctgggcgt gggcattttg atccccgaaa
     1801 cggcttgaga aaaacaaaac gaaacagtgt caggacgcta gtcttatcga gagaggacga
     1861 atagggcaaa actccggcgc atcacccgat agaattacgt cggcgttgcc ggcaggacaa
     1921 gttctgcgcg caatccgcca agtggcgcgg tgccgagcgt caggctaccg ccatagagcg
     1981 ccgcaagttc gaccacgatc gaaagaccca ggccggagcc aggcttggtt tcgtcgagcc
     2041 gttggcctcg ttttgcaacc tgttcgcgct cggatggaga caggccgcgc ccatcatcat
     2101 caacgatcat tcgaatagcc tgacggtcat tgacccgatc cgtcgcctca cagaccacct
     2161 cgatcgaaac gcgagacgtt gcccatttgc aggcattgtc aacaagattt cccatcatct
     2221 cttcaaggtc agggcgctcg ccctgaaatt gggcgctttc gtcggcgtgc acgtcgatcg
     2281 taagattctt gtcgcggtgg attttttcca tcgtgcgggc cagcgcagta acgacaggct
     2341 taacttcggt gactgaaccg acaacggtgg cgcgagcggc aagatgcgcg cgctcgagat
     2401 ggcgggcgac ctggtcgcgc atgatgtcag cttgttcaag caccttttcg gcaaatggct
     2461 cgccgtctcg ggtcgtagct tcgttcacca tcacggacag cggagttttc agggcatgag
     2521 ccagattgcc gacatgcgtg cgggcccgct ctacgatttg tctattggct tcaatcagag
     2581 cattcgtttc gcgtgccagc ggagcaattt cttcggggaa cgtccccgtc aggcgttcag
     2641 agctgccaga acgtatagct gccaagtcgt ccgtgatccg tttaagcggg gcaagcccaa
     2701 aacgaacctg aaacacagcg gtgagcagca gcactgcagc aaggatggaa aaggtaataa
     2761 tgagcgcctg gtcgaacgag cgcatttcgt cggaaatctc ggcggcgtcg ccggcaatcg
     2821 caacgaggta acggccttcg tcgccgaggt ctatatttct ctcgacgagc cggagccgct
     2881 gatcctcagg cccggataca tatccctcgc gggagccatt ggggccggcg gcaataccat
     2941 ggtcttgcag gtgcggcaga ccgccatccc aaagcgatcg cgacgctcgc acttcgcctt
     3001 ttgggccgtc caaccgagtg acttgccaat accaacctga cagaggcagt tcgaacaatg
     3061 gttcgccaag agactgcgga aatttttcgc ttccctcttc tggcgaagca acatccgcca
     3121 ccagcgtacg caagtaaacg ccgagacggc ggtcgaacgc gcgttccacc gcctgccgat
     3181 ataaagacga caacacaatt ccagtgatca gaagaatgat cacagtccaa gcggtggcgg
     3241 acaggaaaag acgcagcgca agagagttgg ctcgcatccc atcaacgtgc gtcaggtgga
     3301 gtgagcaagt atcccaggcc gcgcacggtc tgaatgatct caaccccgag ttttttgcgg
     3361 atgcggccga cgaacacctc gaccgtgttg gaatcacgat cgaaatcctg atcgtagaga
     3421 tgctcgacca actcggtgcg cgagacgacg cggccggtgt gatgcattaa atacgcgagc
     3481 agccgatatt cgtggctggt gagcttgact ggattgccgt tgaccgacac gcggccagtg
     3541 cgcgtatcaa gccgcaccgg cccgcaattg aattcgcttt tcgcatggcc tgctgagcgg
     3601 cgcagaagag cgcgtacccg ggcgaggact tcctccaggt gaaaaggctt tgcaacatag
     3661 tcatcggccc ccgcgtcgaa gccctgtacc ttgtcgctcc accgatcgcg cgcggtaagc
     3721 atgagcacgg gcatggcgcg tccggtccga cgccaagctt ccaatactga tatgccatcc
     3781 atcttgggca atccgatatc aaggatgacg gcgtcatagg gttcggattc cccaagataa
     3841 tggccctcct cgccatcgaa ggcgcggtcg acgacgtagc cggcgtcggt gagcgcagtg
     3901 gcgagttggc ggttcaggtc tggatcgtcc tcgattacga ggaggcgcaa ggcattgttc
     3961 tccactcacg agccggcatt gaactcgcca tttatggcgt caacggtcac gtcgaccact
     4021 ttgccactgc ggccgagcag agtcagcacg tagacgagct tatcgtcctt tcggcagagg
     4081 cgagcacgca caacttcgga gtatttacga tgttggcgca gggatttgat ggcctgaccg
     4141 agtgaaattg cccggtggtc gtccaccgca gcgcgctgct ccgcccttgt gaggcacgca
     4201 ccatgggagg cctcggcacc aatggctggg cagccgatag aacaaaggag taatacggcc
     4261 ggggtgagtc ggggaaccgg catggggggg tgttagcgac gcgccggtga acgttgcctg
     4321 aacgctcgta aatacctttt ttccgctagc tctcgaagcc ctcaaacgat gcaaaagcat
     4381 ccataacagc gcgcggagag cgccaggaat tgattggtgc ggcccgatct tcatagccga
     4441 gggccatgcc cgaatagatc atcaaattgt cgggaagcct caggaacgcc cgcacagtgc
     4501 ggtgaaaaga gacccatgcc tgttgtggac acgtgtgcaa gccatatccg cgcgccagca
     4561 gcgcaaccgt ctgaagaaag ccaccaatgt cggcccattg cgcgggtcca tggtcctttt
     4621 cgcgggcgaa gaatagtgcg acgggcgctc cgaaaaactg atagttgcgc gcatactgcc
     4681 tgtaccgtgc agacttgtct tcacgcgaca ctttgatcga ccgatacagc aattccccta
     4741 ccgtgaaacg gcgttcccga tagggcgcgg tcagcggttc gggataaatg gtgtagtcgg
     4801 taccctcgcc tttcggcaat tcggtcgcca ttcgtggagc caacgcggcc ttgagatcc
//
LOCUS       DATDHO010000401         4295 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_167994, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000401 DATDHO010000000
VERSION     DATDHO010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4295
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_167994"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..605
                     /gene="mbhE"
                     /locus_tag="VIY07_07760"
     CDS             <1..605
                     /gene="mbhE"
                     /locus_tag="VIY07_07760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016555163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydrogen gas-evolving membrane-bound hydrogenase
                     subunit E"
                     /protein_id="HEY6381687.1"
                     /translation="LAESYVRLVPQSLGAPNVITGILLTYRGFDTLGEVAVLFMVAAS
                     VGLVLGTERSRRTVSSEDRPDEARPSSEIVRTGTEILVPLISIFAAYIIMNGHLSAGG
                     GFQGGAVIASGVLLMLLAYPQHQPNLEFLSVTESVAGALFVLVGIAGLIVAGGFLDNR
                     ILPLGQFGAFFSAGAIPLLSVLLGIKVGCELSVILAKFRP"
     gene            621..980
                     /locus_tag="VIY07_07765"
     CDS             621..980
                     /locus_tag="VIY07_07765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEY6381688.1"
                     /translation="MISSIVLITGLLLILIGLWGLLTHRNILRIIISFSLMGTVTHIV
                     TVAIGYVRNGTAPIIDRALNMSEATSRVVDPIPSALVVTAIVIGMAVTAVMLAFAIRL
                     YDSKKTLSIDAFTESKW"
     gene            974..4063
                     /locus_tag="VIY07_07770"
     CDS             974..4063
                     /locus_tag="VIY07_07770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016555165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HEY6381689.1"
                     /translation="MVASLLHPLNIFIVGLGAGFLIPLFYRLGKSWVTAVFILALATM
                     TLISGYAVLTLLQGAAPIESLTGGANPPYAINLRMGLAESIFAFCINLVALLGATYVA
                     RERYAVLLLSLLLVMGIQGMVMTRDLFNLFVFLEIVSIATYGLLGLRDTPAALSATFK
                     FLMATVLASTFFLIGTVLLYAATGILNIDDLIANRDAISGPIGFAALMFLLACLLLEL
                     KPFPANGWGLDVYETARSDIAAMISGGVSAGVFYALLKLLPLFDDQLEIIAVLGAVTF
                     VFSNLIGLRQTKAQRLLGYSSVGQIALLTIAASLLYWLDAEDDVLVVGGLFVNHLFAK
                     VGLFWLAGYVGKERLKDWSILAGKPGVILLFGILIVAISGLPPFPGFWAKWQLVMMLA
                     ANGLYLWIAVVLVGSLLEAAYMFRWLGLSLQPSAEVDTAVRRQADLLPVVGMAVLLAV
                     SGYFAAELAGLSALWVYLPLVAGVAVYLLAGLPSLAQGVATLVLVLAGGSWLLLGLSG
                     LNYLFAVLLLAGGLVVSIACLARADQRPGLYPMLAIMLLSLPALASATTSLEFIFIWE
                     LITLSSYFLILRRSEAAPHALKYLLFSLAAAFFLLCAFAVLQAQTNSVSLSALRFAGP
                     DSAPVFVLLAIGLLIKAGAVGVHVWLPDAYAQADDDVSAVLSAVISKVAIFGLLVGTY
                     VAIRSEVSLNLALVLGWIGMLTTLAGAMLAVQEDDMKRMLAYSSMSQLGYIVAAIALM
                     SHLGWVTALYLVANHLLVKGILFLVAAAVIVRTGTRRLADLGGLAHAMPLTFASAAIA
                     IIAMSGLPPLAGFGGKWLLLSAMMEKGWYGPAVMTLLATFVGFLYMARFIQAIFFGSS
                     KARHHSVTEAPLLLLIPQYLLVAGILMMSFFPKLLIEPISQAIDPQFASTLVWQGMSL
                     EMIYGYWNPLPVMAFAVIVSAIIFGLFWLIRRAGWVFSSGATPAGLRHFFVPVFTALT
                     PPFAAAFWDGLSAATTSIAQRSRTLYTGNGQTYSLYILYYFLVLYVAGGGVRLALVN"
     gene            complement(4085..>4295)
                     /locus_tag="VIY07_07775"
     CDS             complement(4085..>4295)
                     /locus_tag="VIY07_07775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HEY6381690.1"
                     /translation="IDPALMHRIAVIGSGTLDSLPHNGAVVTLLAVCGSTHRKSYFDL
                     VMANIVGPILALVAVIFLGSTLGSF"
BASE COUNT          700 a         1277 c         1209 g         1109 t
ORIGIN      
        1 cattggcgga aagctatgtc aggctcgtcc cgcagtcgct tggcgcaccg aacgtcatta
       61 ccggcatcct cctaacttac cgcggcttcg atacgctcgg agaggtcgcc gttctgttta
      121 tggtggcagc gagcgtcggc ctcgtgctgg gtacggaacg ctcgcgacgc acggtgtcct
      181 cagaggatcg tcccgacgag gcccgaccgt cgtcggaaat cgtgcgaact ggaactgaaa
      241 ttctcgttcc gctcatttcc atttttgcgg cctacatcat catgaatggt catctgtccg
      301 cgggcggcgg cttccagggc ggcgccgtga tcgcctccgg cgttctactg atgctgctgg
      361 cctatccgca acatcagccc aatctcgaat tcctcagcgt caccgagtcc gtcgccgggg
      421 cgctcttcgt gctcgtaggc attgcggggc tgattgtggc cggcggcttt ctggataacc
      481 gcatccttcc gcttggacag tttggtgcct tctttagcgc cggcgccatc cctcttttgt
      541 cggtactcct gggcatcaag gttggctgcg agctgagcgt catcctggca aaattccgtc
      601 cctgaaggct gggccgattg atgatctcaa gcatcgtcct cataacaggt cttttgctga
      661 tccttatcgg actttggggt ttgctcaccc accgcaatat tctgcggatc attattagct
      721 tctctctgat ggggacagtc acccatattg tcaccgtcgc aattggctat gtcagaaatg
      781 gcacggcgcc gatcatcgat cgcgcactga atatgtcgga agccacgtcg cgagttgtcg
      841 atccgatacc ttctgcgctc gtggtgacgg ctatcgtgat cggtatggct gtaacggcag
      901 tcatgcttgc ctttgccatt cgactctatg actccaagaa gacgctgtcg atcgacgcct
      961 tcacggagtc gaaatggtag ccagtcttct tcatcccctg aacatcttca ttgtgggcct
     1021 gggcgcggga tttttgattc cgctgttcta ccgtctcggc aagtcctggg ttacggccgt
     1081 ctttattctt gcgctcgcaa ccatgaccct gatctctggc tacgctgtat tgacgctcct
     1141 gcaaggcgcg gcgccgatcg agagtttgac ggggggtgcg aaccctccct atgcaatcaa
     1201 tctgcgcatg ggtcttgccg aaagtatttt tgcattctgt atcaacctgg tcgcactcct
     1261 tggtgccacg tacgtcgcgc gcgaacgata cgcagtattg ctgctctccc tgctgcttgt
     1321 catgggcatc cagggcatgg tgatgacccg cgatctcttc aatctctttg tgttcctgga
     1381 gattgtttct atcgccacct atggccttct cggattgcgc gatacgcctg cagcattgtc
     1441 ggcgacattc aaatttctca tggccacggt cctggcatcg acattcttcc tgattgggac
     1501 cgtgctgctt tatgcagcta cgggcatcct taacatcgac gatctgatcg caaatcgcga
     1561 cgcgatctcc ggcccgattg gtttcgccgc actgatgttc ctgctggcct gcctgctgtt
     1621 ggagctgaag ccgttcccgg cgaatggatg gggcctcgac gtatacgaaa cggcgcgcag
     1681 cgacatcgcc gcgatgatct cgggcggcgt gtcagccggt gtcttctatg cgctgctcaa
     1741 gttactgccg ctgttcgacg atcagcttga aatcattgca gtcctcggtg ccgtgacatt
     1801 cgtcttctca aatctcatcg gtctccggca gacgaaagcg caacggctcc ttggctattc
     1861 ctcggtcggt cagattgcgc tcctgaccat cgccgcttcc ttgctctact ggctggatgc
     1921 ggaagatgac gtcctcgtgg tcggcggcct cttcgtcaac cacctgtttg cgaaagtcgg
     1981 actcttctgg ctcgccggtt acgtcggcaa ggaacgcttg aaggactggt cgattctcgc
     2041 tggaaagccg ggcgtgatcc ttctgttcgg aatattgatc gttgcaattt cgggtttgcc
     2101 gccattcccc ggattctggg cgaagtggca actcgtcatg atgctggccg ccaacggact
     2161 ctatctgtgg atcgccgttg tgctcgtcgg ctcgctcctg gaagcggcgt acatgtttcg
     2221 ctggcttggc ttaagccttc aaccgtccgc cgaagtggat acagcggtgc gcaggcaggc
     2281 cgatttgctc ccggtcgttg gaatggctgt tctacttgct gttagcggtt atttcgccgc
     2341 cgaacttgct ggcctctctg ctctgtgggt gtacctgccg ctggttgcgg gtgtcgccgt
     2401 gtacctgctc gccggattgc ccagccttgc gcaaggcgtc gcaacccttg ttcttgtgct
     2461 cgccggcggc agctggctcc tcctcggttt gtctggtctg aactatctct tcgctgtcct
     2521 tttgctcgcc ggcggcctcg tcgtgtcgat cgcctgcctc gcccgcgcgg accagcgtcc
     2581 cggcctctat ccgatgctgg ccatcatgct gctgtcgttg ccggcgctcg caagcgccac
     2641 gacgagcctt gagttcatct tcatttggga actgatcacg ctgtcttcct atttcctgat
     2701 attgcgaaga tccgaagccg caccgcatgc gctgaagtac ctgctgttct cgcttgccgc
     2761 agccttcttc ctgctgtgtg ctttcgcagt gttgcaagcg cagaccaaca gcgtgtcgct
     2821 gtcggcgctg cgcttcgcgg gtccagacag cgctcctgtc tttgtgctgc tggccattgg
     2881 cctgctgatc aaggccggtg ccgtcggcgt tcacgtctgg ctgccagacg cctatgcgca
     2941 agccgatgat gacgtgtcag cagtgctttc ggccgttatt agcaaggtag ccatcttcgg
     3001 attgctggtc ggaacctatg tcgcgatccg ttccgaggtg agcctcaatc tggctctggt
     3061 cctcggctgg atcggcatgc tgaccacgct ggccggcgcc atgctggcgg tacaggagga
     3121 cgacatgaag cgcatgctcg cctattcgag catgagccag cttggctaca ttgttgccgc
     3181 gatcgcgctg atgagccatc tgggctgggt cacggcgctg tatcttgtcg ccaatcatct
     3241 cttggtgaaa ggcatcttgt tcctcgtcgc tgctgcggtg atcgtccgaa ccggcacacg
     3301 tcgacttgcc gatcttggcg gccttgccca cgcgatgcct ctcacgttcg cctccgcggc
     3361 catcgccatt attgcgatgt cggggttacc gccgcttgcg ggtttcggcg gcaagtggct
     3421 tctgctgagc gcgatgatgg aaaagggctg gtacgggccg gccgtgatga cgctgctagc
     3481 gacttttgtc ggcttcctct acatggcacg ctttatccag gcgatctttt tcggatctag
     3541 caaggccaga catcacagcg tgaccgaagc accactcctc ttgctgatac cgcaatatct
     3601 tctggtcgca ggcatcttga tgatgtcttt ttttccaaag cttctgatcg agccgatctc
     3661 ccaggcgatc gatccgcaat ttgcttcgac gctggtgtgg cagggcatgt cgctggagat
     3721 gatctacggc tactggaatc ctctcccggt catggcgttt gcagtgatcg tttcggcgat
     3781 aatatttgga ttgttctggt tgatacgacg ggccggctgg gtgttttcgt ccggagccac
     3841 gcctgccggc ctgcgtcatt tcttcgtgcc ggtcttcacg gctttgacgc cgccttttgc
     3901 cgcggcattc tgggacggcc tgagcgctgc caccacgtcg atcgcgcaac gctcgcgaac
     3961 gctctacaca ggcaacggcc agacatacag tttgtacatc ctgtattact ttcttgtttt
     4021 atatgtcgcc ggtggaggcg tccgcttggc tttggtcaac tgataggaac ggccagccta
     4081 atcactaaaa cgatccgagc gtcgaaccta aaaatatcac ggcgaccaag gccaaaatcg
     4141 gccccacgat attggccatg accaaatcga aataactttt acggtgcgtt gatccacaga
     4201 cggcgagcag ggtcacaacg gcgccattgt ggggcaggct gtcgagcgta cccgagccaa
     4261 tcacagcaat gcgatgcatc aacgccggat ctatt
//
LOCUS       DATDHO010000402         6856 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_168079, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000402 DATDHO010000000
VERSION     DATDHO010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6856
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168079"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            326..1102
                     /locus_tag="VIY07_07780"
     CDS             326..1102
                     /locus_tag="VIY07_07780"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HEY6381691.1"
                     /translation="MSGPLIFDIGCHKGEDSDFYLRKGFTVVAVEANPALCARLKQRF
                     LNQIAERRFFLIDKAIAERTGEVTFFTNMDASIWGTIREDWARRNARRGARSEKITVP
                     SIRFSSLIEEFGVPYYLKIDIEGADSLCLGGLLHFEGHPRFVSFEIEHWSLLRKEMNI
                     LTKLGYKKFKIVNQGLVHEQVPPWPAREGIYVDYRFEDDASGLFGNELGGDWTNRAGI
                     IAQLYQLIGRKIVTGVAKRLPAANRLVPRYSSWYDMHAAL"
     gene            complement(1204..1614)
                     /locus_tag="VIY07_07785"
     CDS             complement(1204..1614)
                     /locus_tag="VIY07_07785"
                     /inference="COORDINATES: protein motif:HMM:NF037472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rap1a/Tai family immunity protein"
                     /protein_id="HEY6381692.1"
                     /translation="MSAKRLHVILMGAVVILPTIAPVSTFAEFEEKTEWDVQELYKQC
                     RSRKGSLDEIFCLEFVSAVARQVFRNGMALKENKNRHDSMTLSISPACPKTAVSNDAM
                     VEAFREWANEHIEKWRANAQTGVMQAMRDTWPCF"
     gene            2055..2435
                     /locus_tag="VIY07_07790"
     CDS             2055..2435
                     /locus_tag="VIY07_07790"
                     /inference="COORDINATES: protein motif:HMM:NF042549.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6632 domain-containing protein"
                     /protein_id="HEY6381693.1"
                     /translation="MSDANRLLFLRIALVVIGLTFIFGIYALGIVWPSGWTWGHGHSH
                     YLLMIIGVYATLGVFLLIASRDPYAYKGIIWFTVWSSVVHGAIMGVQAFNDPAERGHL
                     IADVPALFLVAIVLAVLMPRKAQA"
     gene            2893..4401
                     /locus_tag="VIY07_07795"
     CDS             2893..4401
                     /locus_tag="VIY07_07795"
                     /inference="COORDINATES: protein motif:HMM:NF009120.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY6381694.1"
                     /translation="MKSYVFKPKHKQSGLRLAHIAFAGLAALLAASDRTDAAKVRHEQ
                     SVATRPTGEAIMAIVSLRDQQITVYDDKGWIMRAPVSTGQKGRETPAGIFSIIQKKAE
                     HYSNLYDDAYMPHMQRITWSGIALHGGQLPGYPASHGCIRMPYDFAGRLFGVTKLGMR
                     LIVAPGSAAPPVAIEHPALFRPKTGQVAAAAAAAAAKAEEATRKADQARLAAVTANRE
                     SVAAMTAVRKAENLKLRAETELTSVERAIASAASPEAKEQAEGIKAKVTARISELEAQ
                     LVAGKSELQPKLDAVMAAREAAAAAESARVVATDAARKAARDLEPVSVFVSRKTQRLY
                     VRQAFQPILDIPITVNDADRPIGTHIFTATERVGTDIRWSVVSLVGGRAEGSGDEPSG
                     SKGRERAVVATGADLESAKAALGRITIPQDSLDLIAEKMSPRSSLIISDEALSSETGN
                     GTEFVVALSGEPQGGLKNRRPSSQMEVRYDRPSMRYWRAPFAQQNFNRWPRF"
     gene            complement(4411..4620)
                     /locus_tag="VIY07_07800"
     CDS             complement(4411..4620)
                     /locus_tag="VIY07_07800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381695.1"
                     /translation="MADDSDHYEDVDVVLSMLKAVYCRDGADVAVQAAKHMIAAAAAL
                     VTCENGPDETRRILRIVGEAQGKTS"
     gene            4759..6537
                     /locus_tag="VIY07_07805"
     CDS             4759..6537
                     /locus_tag="VIY07_07805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011090391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY6381696.1"
                     /translation="MANPHVERRLAAILAADVAGYSRLMGADEEGTHAALKVYRHEII
                     DPKITEHRGRVVRIIGDGLLVEFASVIAAVRWAVDVQRAIGERNAGLPQEKRIEFRMG
                     INAGDIIIDGTDIWGDGVNVAARLEALAEPGGICVSGRVQEDVHGSLEIAFDDIGEQQ
                     LKNIARPVRVYRVRLKGAGKAMPSLHQPTKPSIVVLPFNNMSGDPEQEYFADGMVEEI
                     TTALSRTRWLLVIARNSSFTYKGRAVDVKQVGRELGVRYVLEGGVRKAADRVRITAQL
                     IDASTGAHLWADRFDGPLQDIFELQDQVTAIVVGAIAPRLEQAEVERAKHKPTESLDA
                     YDYFLRGIASLHSWTKESNDEALRLFTKAIELDPDFASAYGMASWCYVRRKGSRWIVD
                     RAQETAETARLARRAAELGWDDAVALAWGGFALAYVVHDVEVGAALVDRALQLNPNLA
                     EAWHFSGWVRIYLGEPEIAIEHLTHAMRLSPLDPLTFVAQMAIAFAYFFAGRYDDASS
                     WAEKALATSPPGLRERPVYHPALLIAAASYSFAGRLEEASKAIARLRQLNPTAHISNL
                     KNQVPLRRPEDLARYAEGLRKAGLPD"
BASE COUNT         1480 a         1897 c         2008 g         1471 t
ORIGIN      
        1 cgctttttcg gagtaacaat tttgcctatc gagcgatctc gcgactcgaa gcaattcgcc
       61 gctttcgaac tatcgggctg ggacagcaat attggcgtgc cgcgtgttcc ttccgacagg
      121 aatggcgcgt tgccgacgcg gatcgttacg ttggatccat acttaccgga gccgtccgcg
      181 cctgtgcgtc gcctcgttga aaacggccgt tgggcaccag cctgcgggcg agttcaaccg
      241 cctcggcgga gaagtcgagg gcttagaaaa gcgtttgacg caaaggcatt cacaaatgac
      301 catctaaaga agcgggggtc tcaatttgtc aggtccgctt atcttcgaca ttggctgtca
      361 caaaggcgag gattctgact tctatctgag aaagggcttt acggttgtgg ccgtagaagc
      421 gaacccggcc ttatgtgcca ggctaaagca gcgatttttg aatcaaattg cagagcggcg
      481 gtttttcttg atcgacaaag cgatcgctga acggaccgga gaggtcactt tctttaccaa
      541 catggacgct agtatttggg gaacaatcag agaagactgg gctcggcgaa acgcccgccg
      601 gggcgctagg tccgagaaga taacggtgcc ttccattcgc ttttcctcgc taatcgaaga
      661 atttggcgtt ccctattatc tcaagattga tattgagggc gccgattcgc tttgtctcgg
      721 cggactattg cactttgaag gccacccacg atttgtctcg tttgagatcg agcactggtc
      781 tttattgcga aaagagatga atattttgac gaagctgggc tacaaaaagt tcaagatcgt
      841 caatcaagga ctagttcatg agcaagtgcc gccatggccg gccagagaag gcatatacgt
      901 cgattatcga tttgaagacg atgcatctgg tttatttggc aacgaattag gaggcgattg
      961 gaccaatcgc gctgggatta tcgcgcagct ttatcaatta atcggtcgga aaattgttac
     1021 gggtgtggca aagcggcttc ctgcagcaaa tcgactcgtg ccgagatatt cttcctggta
     1081 tgacatgcac gcggcactct agctggagcg ggattagata cacgggcgca ggagttttcc
     1141 taaaggcact tcaagctccg atgtgcattt gctcgcgata aagctctgaa tgactccagg
     1201 gactcaaaaa cacggccatg tgtcgcgcat ggcttgcatt actcctgttt gtgcgtttgc
     1261 cctccacttc tcaatgtgtt cgtttgccca ttcgcggaag gcttccacca tcgcgtcatt
     1321 tgatacagct gtttttggac atgcaggaga aatagacagc gtcattgaat catggcgatt
     1381 tttattctct ttcaatgcca ttccattcct gaagacctga cgtgccacgg cggaaacgaa
     1441 ttccagacaa aaaatttcat caagacttcc ttttcgactt ctgcactgtt tgtacagttc
     1501 ttgaacatcc cattcagttt tctcctcaaa ttctgcaaat gttgaaacag gcgcaattgt
     1561 tgggaggata acgaccgctc ccatcagtat cacgtgaagt cgtttcgcgc tcattgctgc
     1621 ctgtcccctc aacgatggtg gtaatttcga caatgaccac acatcaaacg ccgcgcgtcg
     1681 cttaggcggg catcgcgact gccagtacga ggaacaaagt caacacgctg agcataatga
     1741 cttcctcaat aaaactgcga tcaaattcgt ttgacatctg ccgctcccta tagtcacaca
     1801 tgacaattcg catgcgaata atgtatcggc ccgccggcat ccctgtgtga ggtagctcac
     1861 acgaaagtgg aacttttttc gtgaaaatga gagggtctgc tggtgttatc gccgcaaagc
     1921 gtgccggcgg gagaaaggaa tttcaggaaa taatcaaaag tatctcagga gcaaatcaag
     1981 cttttggcaa agtctttcgg gccggctttt ggcatccagg tttgatccga accttgtacg
     2041 gggagggtgc caacatgtct gatgcaaatc gcctgctttt tctccgtatc gccctggtcg
     2101 tcatcggtct gacgttcata tttggcatat atgcgttggg cattgtgtgg ccgtcgggct
     2161 ggacttgggg ccacggacat tcgcactatc tgctgatgat catcggagtg tatgcgacac
     2221 taggcgtgtt tctgctcatc gcatcccgag atccctatgc gtacaagggc atcatctggt
     2281 ttaccgtgtg gtcgagcgtg gttcacggcg cgatcatggg tgttcaggcc ttcaatgatc
     2341 cggctgaacg cggccatttg attgcagatg tgcctgcgct cttcctcgtg gcgatcgttc
     2401 ttgcagtctt gatgccccgg aaggcgcaag catgagtacg gtcggctaat tctgcttaag
     2461 gcctgagcgg acgtgtgtca gtcgcatgtc cgcttccgga gtcgacgctt gggcgtaagt
     2521 attgacgggc tggaacgcaa ctcttgatcc cgtgaaacgc ggcgctgaac gccctcgttc
     2581 agttagtccc gacgtcaaat ggaatagagc cccaaaaccc cggcaatgct ccgaggtttt
     2641 tgtttaggac ggctcggtcg ctgtcgggcc ttagcggaca tggtcacgcc gatgaatgtc
     2701 tccttttggg acaaaagcca acatcgcctt cgacgtgcgc ttatgaccgg gaacggacct
     2761 aagcgtccga cgtgtctagg taccggcgcc gcaatcaaaa ctgtggtatt cctacctcat
     2821 gcccggcgtg gccttcggca gtccattgaa cgggtggcgt gggttgacac agcccgatca
     2881 gatggcggcc acatgaaatc ttatgtcttc aaacccaagc ataaacaaag cggattacgc
     2941 cttgcccata ttgcgtttgc cggcctggcc gccttgctag cggcgagcga tcgaacggac
     3001 gccgcaaagg tccggcatga acagtcggta gcgacgcgtc cgactggcga ggcgatcatg
     3061 gcgatcgttt cgctgcgcga ccaacagatc actgtctacg atgacaaagg ctggattatg
     3121 cgagcgccgg tgtcgaccgg ccaaaaagga cgcgagacgc cggccggtat cttcagcatc
     3181 atccagaaaa aggccgagca ctactccaac ctttatgacg atgcctacat gcctcacatg
     3241 cagcgtatca cctggtcggg catcgcgctc cacggcggac aactgccagg ataccctgcg
     3301 tcgcacggct gcatccggat gccctacgac tttgccggac ggctgttcgg cgtgacaaag
     3361 ctcggcatgc gcttgattgt ggcgccgggc agcgctgcgc cgcccgtcgc gattgagcat
     3421 ccggcgctat tccggcccaa gacaggtcag gtagctgccg cagcggcggc ggcagctgca
     3481 aaagcggagg aggcgacccg caaggccgat caggcgaggc ttgctgccgt aaccgctaac
     3541 cgcgaatcgg tggccgcaat gacggcggtg cgcaaagcgg aaaacctgaa gctcagagcc
     3601 gaaacggagt tgacgtcggt cgagcgtgcg attgcctctg ccgcctcgcc cgaggcgaag
     3661 gagcaggctg agggtatcaa ggcaaaagtg accgcgcgga tcagcgagct cgaagctcaa
     3721 ctggtcgcgg gcaaatccga gctgcaaccg aagctcgatg cggtgatggc agcccgcgaa
     3781 gcagccgctg cggcggagag cgcgcgcgtc gtcgctaccg acgcggcacg caaagccgcg
     3841 cgcgacctcg aacccgtgtc tgtctttgtt agccgaaaga cccagcgcct ttacgtccgc
     3901 caagcctttc agccgatact ggacatccca atcaccgtaa atgatgccga ccgtccgatt
     3961 ggcacgcata tcttcaccgc aacggaacgc gtcgggaccg acatacgatg gagcgtggtg
     4021 tcgttggttg gcggacgtgc cgaggggagc ggagatgagc caagcggctc taaaggccgc
     4081 gagagggctg tcgtcgcaac gggtgccgac ctggaaagcg cgaaagcagc gcttggccgc
     4141 atcacaattc ctcaggattc cctcgatctt atcgcagaga agatgtcgcc acgatcttcc
     4201 ctaatcatat cggacgaggc attgagctcg gagacaggca acggcacaga attcgtggtc
     4261 gccttgagcg gcgagccgca gggaggtctc aagaatcgac gtccctcgtc acagatggaa
     4321 gtccgttacg atcgtccaag tatgcgttat tggcgcgcgc cattcgcgca gcagaatttc
     4381 aatcggtggc ctcgtttttg aataaaccgt tcaggatgtt ttcccctgcg cctcacctac
     4441 aatccgcaaa atgcgacgcg tttcatccgg cccattttca cacgtgacga gggcggcagc
     4501 cgccgcgatc atgtgcttcg ccgcctgcac cgctacgtct gcgccgtcgc ggcaataaac
     4561 cgctttgagc atggatagga cgacgtccac gtcttcgtaa tggtccgaat catcagccat
     4621 gccgcgacag catgcgccca tggctatggt cacggcaact tcgcccaata tccgcaaatg
     4681 accaaagcgg acattgttgc tcgatagaca caccgccccc ccgaccataa actccgctcg
     4741 aagtcaggga cgctgcttat ggccaacccg cacgtcgaac ggcgtttggc cgccatcctc
     4801 gcggccgatg ttgcaggcta tagccggctg atgggcgctg atgaggaagg tactcacgcg
     4861 gcgctcaaag tgtatcgcca cgaaatcatc gatcccaaaa taacggaaca ccgcggccgc
     4921 gtcgtgcgga tcatcggcga tggtctcctg gtggagtttg ccagtgtgat agcggcggtg
     4981 cgctgggccg tcgacgtcca acgtgcgatc ggcgaacgaa acgccggcct gcctcaggag
     5041 aagcggatcg agttccgtat gggcatcaac gccggggaca tcattattga cggcactgac
     5101 atttggggcg acggcgtgaa cgtagcggca cgattggaag ctctggccga acctggcgga
     5161 atttgtgttt ctggccgggt gcaagaggat gtccacggga gtctcgaaat cgccttcgac
     5221 gatattggcg agcagcagct caagaacatt gcgcggccgg tgcgggtcta ccgagtgcgg
     5281 ctcaaggggg cagggaaggc aatgccttcg ttgcatcagc ccaccaaacc gtcgatcgtc
     5341 gtcctgccct tcaacaacat gagcggcgac cctgagcagg agtacttcgc cgatggcatg
     5401 gtcgaagaaa tcacgacagc cttgtcgcgc acgcgctggt tactcgtaat tgcgcgcaat
     5461 tcgagcttca catacaaggg ccgggccgta gacgtgaaac aagtcggtcg tgaactgggg
     5521 gtgcgctacg tgctcgaagg cggcgtgcgc aaggccgcgg accgggtgcg tatcacggca
     5581 cagctcatcg atgcgtcaac tggagcgcac ctctgggcag atcgcttcga tggaccgctg
     5641 caggatatct ttgagctgca agaccaggtc accgcaatcg tggtgggagc aatcgccccc
     5701 agattggaac aagccgaggt cgagcgtgcg aagcacaagc cgactgagag ccttgatgca
     5761 tacgactatt ttttgcgagg gattgcgagc cttcattcct ggacgaaaga gagcaacgac
     5821 gaagcgctgc ggctattcac taaagccatt gaactcgatc ctgattttgc gtcggcctat
     5881 ggcatggcgt cttggtgtta cgtccgccgc aagggaagtc gttggatagt tgaccgcgcg
     5941 caagagaccg ccgaaaccgc acggctggct cgtcgtgcgg ctgagttagg ctgggatgac
     6001 gcggttgcgc tcgcttgggg aggctttgcg cttgcatatg ttgtccatga cgtcgaagtc
     6061 ggcgcagccc tcgtcgatcg tgctctccaa ctcaatccga acctggcgga ggcgtggcat
     6121 tttagcggct gggtgagaat ctatttgggc gagcccgaaa ttgccatcga gcacttgacg
     6181 catgccatgc ggctgagccc gctcgatcca ctcactttcg tggcgcaaat ggcgatcgca
     6241 ttcgcgtatt tcttcgccgg ccgctacgat gatgcatcgt catgggcgga aaaggcgttg
     6301 gcgacatcgc cgcccggact gcgggaaagg ccggtgtatc accccgcact gctcatcgct
     6361 gcggcaagct attcatttgc cgggcggctc gaggaggcgt cgaaagcaat agcgcggttg
     6421 cgccaactca atccgacggc ccatatctcg aatctaaaga atcaagttcc gcttcgtcgg
     6481 ccagaggatc ttgccaggta cgccgagggc ctgcgaaaag cgggactacc ggattaggcc
     6541 ttgcaaggca cccaaggtgc cgctcgcgaa gaatgcattc gcagcgccga aggtcagcgt
     6601 tctagcgtaa agcgagcatg ccaaatgcgc tgcgggacgt ccgatccttg cgctggcgga
     6661 catcccgcag actttattca acgccgtagt aagcggccga tccgtgagcg cggctcaagg
     6721 attggtagac gtggtgttgc tgcgaccctt gcgatcgatc ggcgcggcct gtgcctgcga
     6781 aggatccgtt gcgccgttgc cctgtccgtt gacgctaacg gactgtgccg gtgagcgctt
     6841 cgccggaacg agcgag
//
LOCUS       DATDHO010000403         3466 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_415821, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000403 DATDHO010000000
VERSION     DATDHO010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3466
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_415821"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1321)
                     /locus_tag="VIY07_07810"
     CDS             complement(<1..1321)
                     /locus_tag="VIY07_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6381697.1"
                     /translation="MNFSYPFIRRPIGTTLLAIGVFLVGAVAYTFLPVASLPNVEFPT
                     INITANLPGADPNVMAATVAAPIERRVGEISGVTELTSVTTLGQSRITVQFDLSRSIE
                     GAARDVQAALNAALSDLPTDMPQLPTFRKANPASAPILILALTSKTMQPSAIYDVADS
                     IIAQRLSQVDGVADVTVAGSEQPAIRVRVDPARLSAMGLSMEDVRTAISNSNAVGPIG
                     AFDGDKRGVTIGINDQLRNASEYDPLVVKTANGTVIRLSSIATIRPSVRNSRAAGWYN
                     RDPSVLLVITKQGDANVIDTVDRINELLPELRQWVPAGLDISVLTDRTQTIRASVRDM
                     QLTLAATIALVMLVVFLFLRRAAPTAAAGVTVPLALSGTCAAMWVAGFSIDNLSLMAL
                     AVSVGFVVDDAIVMIENAFRHLERGASPLRATLLGARQIGFTVVSISI"
     gene            complement(1318..>3466)
                     /locus_tag="VIY07_07815"
     CDS             complement(1318..>3466)
                     /locus_tag="VIY07_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6381698.1"
                     /translation="TIIAGVALPLSLIATFGVMWFCGFSLDNLSLMALTIGTGFVVDD
                     AIVMIENIVRHMENGEGPLQAALRGAREIGFTVISLTLSLIAVFIPLLFMTGLVGRMF
                     REFALTLTIAVVASAVVSLTLTPMMCARLLRHVENPGRRPSNALTVHFHQLIDRTVEA
                     YRRSLEWVLRRQPETLVVTLATLVATILLYIVVPKGFLPLQDTGLITAVTEAGTDVSF
                     TEMQRRQRLVEDAIRSDHDVAGVVSVIGVSPINATPNTGRLAITLKPRDDRTARVDEI
                     VARLKQAVAGVAGMTVYFQAAQDIQISTRVSRAQYQYTLVSTDRDEVIEWSDKLVRHL
                     RGNSVFREVASEAQEGAPRVQVEVDREQAGRLGVSMQSVTDTLNDAFGQRQVSTIYGQ
                     ANQYRVILEAQPRYQQDPNALSKLYVTGTNTSTGTVATVGNTATGTTNTNTTATPNAV
                     TSSNQVPLSSFARFVPTSAPLAIAHQEQFPSVTISFDLMEGYALSDAVAAIRAAERDI
                     GMPSSVTGSYSGDTAEFAKSLAGEPWLILAAAIAIYIVLGVLYESFIHPLTILSTLPS
                     AGVGALLALMLLGYDLSVIALIGIVLLMGIVKKNAILMIDFAIDAERYQGLSPQESIV
                     QAALLRFRPIMMTTLAALFGALPLALESGTGSELRNPLGITIIGGLLLSQLLTLYTTP
                     VIYLYMERLRARVAPAPSSPPPRRIGRPARGRP"
BASE COUNT          716 a         1011 c         1123 g          616 t
ORIGIN      
        1 aaatcgaaat cgacacgacg gtgaagccga tctgtcttgc ccccagcaag gtcgcccgca
       61 ggggcgacgc tccccgctcg agatgacgga aggcgttttc gatcatgacg atggcgtcat
      121 cgacgacgaa acccacgctc accgcgagcg ccatcagcga taaattgtcg atggagaagc
      181 cggcgaccca cattgccgcg cacgtgcccg agagtgccag cggcacggta acgccggctg
      241 ccgcagtggg ggccgcacgc cgcagaaaaa gaaatacgac cagcatcacc agggcgatgg
      301 tggcggcgag cgtaagctgc atgtcgcgca cgctggcacg gattgtttgc gtgcggtcgg
      361 ttaacacgga aatatcgagg ccggccggca cccactgccg aagctcaggc aagagctcgt
      421 tgatgcgatc gaccgtgtcg atgacgttgg cgtcgccctg cttggtgata acgaggagga
      481 ccgaagggtc ccggttgtac cagccggcgg cacggctgtt gcgcacgctc gggcggatcg
      541 tggcaatgct tgacaggcgg atgacggtgc cgtttgccgt cttcaccacc aatggatcgt
      601 attcgctggc gttgcgcagc tggtcgttaa tgccgatggt gaccccgcgc ttgtcgccat
      661 cgaaggcccc gattgggccg acggcgttgg aatttgaaat cgccgtgcgc acgtcctcca
      721 ttgatagtcc catggcggac aagcgtgccg gatcgacgcg cacgcggatc gccggctgct
      781 cggatccggc taccgtgaca tcggccacgc catcgacctg cgacaaccgt tgcgcaatga
      841 tgctgtcggc aacgtcatag attgcgctgg gctgcatggt ttttgaggtc agcgccaaga
      901 tcaggatagg agccgaggcc gggttagctt tacggaatgt cggcaattgc ggcatgtccg
      961 tcggcaagtc gctgagcgct gcgttaagcg ccgcctgtac atcgcgagca gcgccttcga
     1021 tgctgcggct cagatcgaac tggacggtga tgcgcgactg accgagcgtg gtgaccgaag
     1081 tcagttcggt cacgccggaa atctccccaa ctcgtcgttc aattggagcg gcgaccgttg
     1141 ccgccattac gttgggatcg gcgccaggca aattggcggt aatgttgatc gtcggaaatt
     1201 cgacattcgg caggctggcg acaggaagaa aggtataggc aacagcgccc acgagaaata
     1261 cgccgatagc cagcagcgtc gtgccgatcg gccggcgaat gaaggggtag gaaaaattca
     1321 cggccggcct cgggctggac ggcctatccg gcgaggcggc gggctggatg gtgcgggcgc
     1381 aacgcgcgcg cgcagacgct ccatgtaaag gtaaatcacc ggagtggtgt acagcgtcag
     1441 caactgggag agcagcaatc cgccgatgat ggtgatgcca agcggattgc gcagctcgga
     1501 ccccgtgccg ctttcaagcg ccagcggcaa agcgccgaag agggctgcca gggtcgtcat
     1561 catgatcggc cggaagcgca acagcgccgc ctgcacgatg gattcttgcg gcgaaaggcc
     1621 ttgataccgc tcggcgtcga tcgcgaagtc gatcatcaga atcgcgttct tcttcacgat
     1681 gcccatcagc aatacgatgc cgatcaacgc gatgaccgaa agatcgtagc cgagcagcat
     1741 cagggccagc agcgcgccaa caccggcgga aggcagcgtg gaaagaatcg taagtggatg
     1801 aatgaaactc tcgtacaaga cgccaagcac gatgtagatc gcgatcgctg cggcaaggat
     1861 gagccacggc tcgcccgcca gggatttggc gaattcggcg gtgtcgccgg aataactgcc
     1921 cgttaccgag gacggcatgc cgatgtcgcg ttcggcggcg cggatggccg cgaccgcgtc
     1981 agagagtgca tagccctcca taagatcgaa gctgatggtg acggacggaa actgctcttg
     2041 atgcgcgatc gcgagcggcg ccgatgtcgg gacaaaacgc gcgaacgatg acaggggcac
     2101 ctggttgctg ctggtcacgg cgttaggcgt ggcggtggtg ttggtattgg ttgttccggt
     2161 cgccgtgttg ccgacggttg cgaccgtacc ggtcgatgta ttggtgcccg tgacgtacaa
     2221 cttcgacaac gcattcgggt cctgctggta ccgcggttga gcttcaagaa tgacgcgata
     2281 ttggttggcc tggccgtata tcgtggaaac ctgccgctgg ccgaaagcat cgttaagcgt
     2341 gtcggtgacg ctctgcattg agacgccgag ccgtccggcc tgctcgcggt caacttccac
     2401 ctgtacccgg ggggctccct cctgcgcttc ggatgcgacc tcgcggaaca cagaatttcc
     2461 gcgcaggtgt cgcaccaact tgtcggacca ttcgatgact tcgtcgcggt cggtggaaac
     2521 cagcgtgtat tgatattgcg cgcgactcac gcgggtcgaa atctgaatgt cttgcgcggc
     2581 ctggaaatac acggtcatgc cggcgacgcc ggcgacggcc tgtttgagcc gcgccacgat
     2641 ctcatcgacc cgggccgtgc ggtcgtcgcg cggcttcaag gttatggcga gccgaccggt
     2701 atttggggtg gcattgatcg ggctcacgcc aataacggac acgacacccg ccacgtcgtg
     2761 atcggacctg atcgcgtctt cgacgagacg ctggcggcgt tgcatttccg tgaacgacac
     2821 atcggtaccg gcttctgtca ctgcggtgat caggccggtg tcctgtaaag gcaggaagcc
     2881 ttttggtacc acgatataaa gcaggatcgt ggcgacaagg gtcgccagcg tgacgacaag
     2941 cgtctcgggc tgacgacgca gcacccattc gagacttcgc cggtacgcct cgacagtccg
     3001 atcgatcagc tggtggaagt ggacagtgag cgcgttagac gggcggcgcc ctggattttc
     3061 gacatggcgc aacagccgcg cgcacatcat gggcgtgagc gtcagcgaga cgaccgccga
     3121 agcaaccacc gcgatcgtca gagtcagcgc aaattcgcgg aacatgcgtc cgaccaggcc
     3181 cgtcatgaag agcaacggga tgaacacggc aatgagcgac aacgtcagcg aaatcaccgt
     3241 gaagccgatt tcccgcgcgc cgcgcagcgc tgcctgcagc ggaccttcgc cattctccat
     3301 atgccgcacg atgttttcga tcatgacgat ggcatcgtcg accacgaagc ccgtaccgat
     3361 cgtcaacgcc atcagcgaca gattgtcgag cgagaagccg caaaaccaca tcactccgaa
     3421 cgtcgcgatc agcgacagcg gcaatgccac gccggcaatg atggtg
//
LOCUS       DATDHO010000404         1561 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_119270, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000404 DATDHO010000000
VERSION     DATDHO010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1561)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1561)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1561
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119270"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..511)
                     /locus_tag="VIY07_07820"
     CDS             complement(<1..511)
                     /locus_tag="VIY07_07820"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY6381699.1"
                     /translation="MSDSISRRRMLVGAANAVGAGSLLLSTPSRVFGQSVKPITVGFI
                     YAATRNDYGWNQAHAVAARRIAALPGVKLVEQERVPETAQVERVMESMIQLDGAKVLF
                     PTSFGFWPFIQKIAPKYADVLFVHAGGLWKEGDAKNTIGYRGYMEEPHYLCGIAAGMM
                     SKTGKLGFIG"
     gene            545..949
                     /locus_tag="VIY07_07825"
     CDS             545..949
                     /locus_tag="VIY07_07825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381700.1"
                     /translation="MSPDHLHIRSNPTGLVNSADGSDDAELVAGRAAVFIMALSRAYL
                     AAVKASVCCVISSAPGTRAAKSGGALFSMRSRVVGTHHHLTAHLPVAFAAPHWTTNPS
                     MPSAVQALLYDALKGNFLVPVLVPFIPKTVYP"
     gene            959..1315
                     /locus_tag="VIY07_07830"
     CDS             959..1315
                     /locus_tag="VIY07_07830"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381701.1"
                     /translation="MLPLSAAILDVSLQATCLGARVVVPVGAPLKAALDAAKKQGPLI
                     LVSTDNRPWTPDGFRASWGKACAKAGIIGVTFNDLRDGRNAASAGRMHRGGDRDDHRT
                     LAPGRSHDPRFALPAS"
BASE COUNT          319 a          494 c          436 g          312 t
ORIGIN      
        1 agccgatgaa gccgagtttg ccggtcttgc tcatcatccc agcggcaatt ccgcacaggt
       61 aatgcggctc ttccatgtac ccgcgatagc cgatcgtatt tttcgcatcg ccctccttcc
      121 acaagccgcc ggcgtggaca aaaagcacgt cggcatattt tggcgctatc ttctggatga
      181 acggccagaa tccgaaggac gtcgggaaca ggactttggc gccgtcgagc tggatcatgc
      241 tttccatcac ccgctcgacc tgcgcggttt ccggcacccg ctcttgctca accagcttga
      301 ccccgggcaa cgccgcgatc cgtcgcgccg cgacggcgtg cgcctgattc cagccgtagt
      361 cattgcgcgt ggcagcgtag ataaaaccca ccgtgatcgg cttgacggat tggccaaaca
      421 ctcgcgaggg ggtgctcaac agaagggaac ccgcccccac tgcgttggcg gctcctacca
      481 acatgcgccg gcgcgaaata gaatcggaca tcgtgatctc ccctcgctgc tgcagaaaac
      541 tgcggtgtca cccgaccatc tgcacattcg atcgaacccg acaggcctcg tcaacagtgc
      601 tgatggcagc gacgatgcgg agctggtcgc cggccgggcc gctgtgttca taatggccct
      661 ttctcgggcc tatttggccg ctgtgaaggc cagtgtgtgt tgcgtgatct ccagcgcgcc
      721 ggggaccaga gcggctaagt cgggtggcgc gctgttctcg atgcgatcgc gggtggtcgg
      781 aacgcaccat catctgactg cgcatctccc tgtggccttt gccgccccgc attggacaac
      841 aaatccctcg atgccgtccg cagttcaagc gctactgtac gacgcactca aaggcaattt
      901 tctggtaccg gtactggtgc ccttcattcc aaagaccgtt tatccttgag ccgtttacgt
      961 gctgcctcta tccgcagcaa tacttgatgt ctctcttcaa gcgacgtgtc tcggcgcccg
     1021 tgtcgtggtt ccggtcggcg cgccactcaa ggccgcgctc gatgctgcga aaaaacaagg
     1081 cccgctcatt ctcgtatcga ccgacaatcg gccatggacg ccggatggat tccgcgcgtc
     1141 atggggcaag gcttgcgcca aggctggcat cattggcgtg acgttcaacg atcttcgcga
     1201 cggccgtaac gcggctagcg ctggccgaat gcaccgaggc ggagatcgcg acgatcaccg
     1261 gacactcgct ccgggacgtt cgcacgatcc tcgattcgca ctacctgcat cgtgatccag
     1321 ggctcgctga gaacgcgatc aggaagctcg aaaagagaac aaaactcccg actaagctcc
     1381 cgactaagct cccgactggt ccaacctgtt ctaagactga cggggaaaag agcaataaaa
     1441 tcaatggctg aggatgcagt ccgatgccaa cccgtctccg cacccaaatt ccctgctaac
     1501 agggaaaaga acagggaatt tcgccggaaa caggccctcg ctgggatttt gacggtccaa
     1561 t
//
LOCUS       DATDHO010000405         2969 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_316833, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000405 DATDHO010000000
VERSION     DATDHO010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2969)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2969)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2969
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316833"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..76)
                     /locus_tag="VIY07_07835"
     CDS             complement(<1..76)
                     /locus_tag="VIY07_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEY6381702.1"
                     /translation="MSFTLPDLPYAHDALAPYMSRETLE"
     gene            396..1289
                     /locus_tag="VIY07_07840"
     CDS             396..1289
                     /locus_tag="VIY07_07840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381703.1"
                     /translation="MPALLYGIGIFALFAGLMMVGFGIPINEFSFGNTLISAGTTAAV
                     GGLIIIGLGVLTGQVRRLSQTLAMQEPGQRQPIETPEIADATAQVRVPFPARSRPEPH
                     TAAHAGAAMSTAAPFEDLAESVVPTLRNPDESTVAAEDDVSLSPRHPLAPASPGAGDL
                     GGPRAGSGPAPGSMPDKSREPAAGWRSVAVSSTSASQERPIHTANFDAMWPAEVKLPK
                     ASTGTPLEAKPEPSSHDTVSRRREAEPQKARSPAVLRSGVVDGMGYTLYVDGSIEAEL
                     PQGTLRFASINELRSHLAKKS"
     gene            1505..1924
                     /locus_tag="VIY07_07845"
     CDS             1505..1924
                     /locus_tag="VIY07_07845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HEY6381704.1"
                     /translation="MSDSTVDGNFIELTAEIVSAYVSNNTVPAGEIPSLINQVHAALS
                     RVSGKSAEGPTEPLKPAVSVKKSITPEYIVCLEDGKKFKSLKRHLRTQYNMTPEQYRE
                     KWGLSADYPMVAPNYAAARSQLAKQMGLGQQRRRRAK"
     gene            complement(1962..2297)
                     /locus_tag="VIY07_07850"
     CDS             complement(1962..2297)
                     /locus_tag="VIY07_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381705.1"
                     /translation="MDFLFHQRQRSRGHLQSRPAVAPKQVVERESNQPLVPADCGLRP
                     IFFVVCRELSTCARGAEIAAVVASVAPGPESAAIVSVAAWHDHSSLAAFLGVGLFTYT
                     TAANKVPLK"
     gene            2246..2440
                     /locus_tag="VIY07_07855"
                     /pseudo
     CDS             2246..2440
                     /locus_tag="VIY07_07855"
                     /inference="COORDINATES: protein motif:HMM:NF040428.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6456 domain-containing protein"
     gene            2560..2766
                     /locus_tag="VIY07_07860"
     CDS             2560..2766
                     /locus_tag="VIY07_07860"
                     /inference="COORDINATES: protein motif:HMM:NF040428.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6456 domain-containing protein"
                     /protein_id="HEY6381706.1"
                     /translation="MVDVCCFLKGLEAIERDRAWPSRSGKVVPQLALDRLARHYGYAA
                     RARGPARSQLRAWSADGADSGDSG"
     gene            complement(2767..>2969)
                     /locus_tag="VIY07_07865"
     CDS             complement(2767..>2969)
                     /locus_tag="VIY07_07865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HEY6381707.1"
                     /translation="IVRGLIAILFALYSGKTARDILAIDSLALFDRIGLRENLTPQRS
                     NGLRSMVERIRAEAKAALAEAA"
BASE COUNT          651 a          819 c          887 g          612 t
ORIGIN      
        1 actcaagcgt ctcgcgagac atatagggtg cgagcgcatc gtgggcataa ggcaggtcag
       61 gcagggtgaa cgacattatg tcctccttga tccacaaacg ataaatggga aataagccgg
      121 cagttggatg aaacccggct atcccgaatg agttcctcaa taagctaatt aggcggtggc
      181 gcgttctggg gcaacggctg accgattact ggcggcggaa tccgaatgtc gcccgcccca
      241 aagcggccgc gccgcaagtt tccttaagcg gagtgcgttt tagtcctaac tttagttgtt
      301 gccgccaagg gtcgaacagg cgagaatttg acgttgccag aaggttttag cttgtcgatt
      361 gcagaaatag tcgctgattg aggaaggata aaagcatgcc ggctttattg tatggtatcg
      421 ggatctttgc cctttttgcg gggcttatga tggtcgggtt tggcatcccg atcaatgaat
      481 ttagcttcgg aaatactctc atcagcgccg gcacgaccgc tgcagtgggc ggcctcatca
      541 tcatcggtct gggggtcttg accggacagg tgcgccggct ttcacaaacg ttggctatgc
      601 aagagcccgg tcaacggcag ccaatagaga cgccagaaat tgcggatgcg acggcacaag
      661 tccgcgtgcc attccctgct agatcgagac ctgagcctca cacagcggct cacgcgggcg
      721 ccgcaatgtc aaccgcggcg ccattcgagg atctggctga gtcggttgtg ccgactttgc
      781 gtaatccgga tgagtcgaca gtggcagccg aggacgacgt ttccctgtca ccacgtcacc
      841 ccttggctcc ggcgtcgccg ggcgccggcg acctcggcgg accgcgggca ggctcaggtc
      901 ctgcgcccgg atccatgcct gacaagagtc gcgagccggc ggcgggctgg cgatcagtag
      961 cggtttcctc aacttctgca tcccaggagc ggcccattca cacagccaat ttcgacgcca
     1021 tgtggccggc tgaagtgaag ctgccgaaag cttcgaccgg cactccgctg gaagcaaagc
     1081 ccgagccgtc atcacacgat accgtttccc gacgccgtga agcggaaccg caaaaagccc
     1141 gctcgcccgc cgtgctgaga tcgggtgttg tcgacgggat gggctacacg ctttatgtcg
     1201 acggttcgat cgaagccgaa ctgccgcagg gaacgttgcg ctttgcctcg atcaacgagt
     1261 tgcgtagcca ccttgcaaag aaatcgtgac ctttgaccat cgttttccgc ttattatttt
     1321 atttcttctt gtgctggtcg tattcgccca ataattgtcg ccgaagacag ctatcttttt
     1381 cttgcggatt ctaaaattgg atagtagttt taaaatatag gcttgatctc gatactcgct
     1441 tgttgcgatc gatgggattg agcgactttc gccggcgcga tgtcgcgcga cacgaggccc
     1501 atccatgagt gacagcacgg tcgatggcaa tttcatagaa ctgaccgcgg agatcgtctc
     1561 tgcctacgtg agcaacaata cggtgcccgc aggcgaaatt ccgagtctga tcaatcaggt
     1621 gcacgcggcg ctgagcaggg tctctggaaa gtctgctgag ggtcctaccg agccgctaaa
     1681 gccagctgtg tcggtgaaaa aatcaatcac gcccgaatac atcgtctgtt tggaggacgg
     1741 aaagaaattc aaatcgctaa agcgtcacct gcgcacgcag tacaacatga ctcctgagca
     1801 gtatcgggaa aaatggggct tgagtgccga ttaccccatg gtggctccaa attatgccgc
     1861 cgcccggtcc caacttgcca agcaaatggg gttgggacag caacgacggc gacgggcgaa
     1921 ataactggct gatttctaga aattgtggaa atcggtgccc gctattttag cgggacttta
     1981 ttggcagccg tggtgtaggt aaataatcct acaccaagaa aggccgccaa tgatgagtga
     2041 tcatgccaag ccgcaacaga cacaattgcc gcactctccg gaccaggagc aaccgacgca
     2101 accacggcgg ctatctcggc gccgcgggcg caggtcgaaa gttcgcggca aacgacgaaa
     2161 aaaatgggcc gcaatccaca gtcagcagga accagtggtt gattgctttc gcgctcaaca
     2221 acttgttttg gcgcaacggc aggtcgtgac tgaagatggc cgcgcgaacg ttgtcgttga
     2281 tgaaacagaa agtccactga gctggctcgc cagccgacgt ggacgcgatg gccgcgcgct
     2341 gatcgaagcg catcagttgg aggcgggcga gcggctgcgg gccgatttta cccgagcaaa
     2401 tctaatgccg cgcataacgt ctgattggtc aaacccgtcg tcagccgggc gccgcgccag
     2461 gggtggcgaa cgggcggacc tgctgacaga tacgatagtt gcctcgcggc aacgcgtaat
     2521 caggcgttgg atgctgtcgg tcccgaattc gcggggctat tggtcgacgt ctgctgcttt
     2581 cttaaaggct tggaagccat cgagcgtgac cgagcgtggc cgtcgcgttc gggcaaggtg
     2641 gtgccgcaac ttgcccttga tcggctcgcc cgacactacg gctacgctgc gcgagcacgc
     2701 gggccggcac ggtcgcaact gagagcctgg tcggctgatg gcgccgattc cggcgatagc
     2761 ggctaattat gcagcttcgg ccaaagccgc cttggcctcg gcgcggatgc gttcgaccat
     2821 tgagcgcaac ccgttcgagc gctgcggtgt aagattctcc ctcaggccaa tgcggtcaaa
     2881 cagcgccagg gaatcgatcg ccagaatgtc tcgcgcggtt ttgcccgagt agagtgcaaa
     2941 aagaatcgcg atcaaacctc gtacaatgt
//
LOCUS       DATDHO010000406         2334 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_462642, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000406 DATDHO010000000
VERSION     DATDHO010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462642"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="VIY07_07870"
     CDS             <1..201
                     /locus_tag="VIY07_07870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381708.1"
                     /translation="RRCRRRPLPSFESMFTDRVNRPLAQTVSNLWGAPSATTPAQTQK
                     VQVFDLFTDTRPNERKLRGDKA"
     gene            330..1523
                     /locus_tag="VIY07_07875"
     CDS             330..1523
                     /locus_tag="VIY07_07875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HEY6381709.1"
                     /translation="MIVRQFLQWVRQAPPGERAEATSALARAYLYSDLSHDDLAAAEG
                     AMIMLLDDPSPLVRRALSEVFASCEQAPQVVVHALAADQPDVALPVLEFSPLLREDDL
                     VDLIATGRAEAQIAVAKRCLLTRGAAAAMAEVGEADACLALLENPGADIPRFSIDRII
                     ERFGHLAPIRENLLAREDLSTPMRQALLSKLSQTLAGFVTARQWLESEHAEFTAREAC
                     EKATVALAADTSYDEVAALVRYLRQSGQLTAGMLLRALLSGNVVLFEEALAELSGISI
                     DRVTAYIHDKNISGFRALYREAGLPDTAYPAFREALAAMRAGFLVGEQGGAARLKRRM
                     VERVLGACAHERGEDTAALLALLRRFAVEAAREEARLFCDDLVAEAAILQADESYVEE
                     HLAAA"
     gene            complement(1542..2114)
                     /locus_tag="VIY07_07880"
     CDS             complement(1542..2114)
                     /locus_tag="VIY07_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEY6381710.1"
                     /translation="MRHAKDAIAIVTYGDHEVITPENRLSGAVSTNTPGEPHDDPVAR
                     AEKALAQLSCEFGSWMDSECDRLDKARRAFAKDVARSNADALFHAAHDIKGEAATFGY
                     PAIASAAESLCRLIEYTPDTARIPLKLIDQHVDAVRAIYREYARSDAKELAATLTKHL
                     HEVTGEFLRHENRGRSEVLDQLKGPSIVPE"
     gene            complement(2132..>2334)
                     /locus_tag="VIY07_07885"
     CDS             complement(2132..>2334)
                     /locus_tag="VIY07_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6381711.1"
                     /translation="ISAKGLYQRIINVVANPRPFIKTKTYFGPDRRRNVNSNYIGPER
                     RKGGKADVIRQTPLLEKARAPV"
BASE COUNT          396 a          685 c          756 g          497 t
ORIGIN      
        1 agacgttgcc gccgccgccc gctgccatct ttcgagtcca tgtttacgga ccgggtcaat
       61 cgcccattgg cgcagaccgt gagcaacctt tggggcgcgc cttccgccac gacgccagcg
      121 caaacgcaaa aggtgcaggt cttcgatctg ttcaccgaca cgcggcccaa tgaacggaag
      181 ctgcggggcg acaaggcctg acttccgcgc caccgcggct cgcatgctta acagtccatc
      241 aatttctatg gtgaacgctt tgttaaggct cctccggtag cctgatgctg ccgtcaaaag
      301 gggcgacggt tctatcgtag cgtcttgcca tgatcgttcg tcagtttttg caatgggtgc
      361 gccaggcacc gcccggggag cgggcggagg ccacttcggc attggcgcgc gcctatctct
      421 actccgatct gtcacacgac gatctcgctg ctgcggaagg cgcgatgatc atgctgctgg
      481 acgatccatc gccgctggtt cgccgcgcgc tttcggaagt atttgcatcg tgtgagcagg
      541 ccccacaggt cgtcgtgcat gccctggctg cggaccagcc cgatgtggcg ctgccggtac
      601 tggagttttc gccactgctg cgggaagacg atctggttga tcttatcgcg accggacgag
      661 ccgaagcaca gattgccgtc gcgaaacggt gcctgttgac gcggggggct gccgcagcga
      721 tggccgaggt tggcgaagct gacgcgtgtc tcgccttgct ggaaaatccg ggcgccgata
      781 tcccgcggtt ctccattgac cggatcatcg aacgcttcgg gcacctggca ccgatccgcg
      841 agaatctttt ggcgcgagag gatttgtcga cgccgatgcg gcaagctctt ctctcgaagc
      901 tgtcccagac gctggctggt tttgtaacgg cgcggcaatg gctcgagtcg gagcatgctg
      961 aatttaccgc gagggaagcg tgcgaaaagg cgacggtggc gctcgctgcc gatacgagtt
     1021 acgacgaagt ggctgcgctg gtgcggtatc ttcggcaaag cgggcagctt accgcgggaa
     1081 tgcttttgcg ggcgctgttg tccggcaatg tcgtcctgtt cgaggaagcg ctggcagagt
     1141 tgtccggcat atcgatcgac cgcgtgacgg cttacatcca cgacaaaaac atttcaggat
     1201 ttcgcgcgct ttaccgcgag gccggcctgc ccgacacggc atatccggcc ttccgggaag
     1261 cgctcgcggc aatgcgcgcc ggcttcttgg tcggcgagca gggcggggcg gcccggctca
     1321 agcgtcgcat ggtcgagcgc gtgctcggcg cttgcgccca tgaacgcggg gaggacactg
     1381 cagcgctcct cgctctgttg cggcgctttg ccgtggaagc ggcgcgcgag gaggctcggc
     1441 tgttctgcga tgacctggtg gcggaagccg caattcttca ggccgacgaa tcgtatgtcg
     1501 aggagcatct ggcggcggcg tagccgtcat ttgcgcgttg cctactcggg cacgatcgag
     1561 gggcctttaa gctggtcgag aacttcggaa cgcccgcgat tttcgtgccg gagaaactcg
     1621 cccgtgactt cgtgcaggtg tttggtcaag gtcgccgcaa gctctttggc gtcggaacgc
     1681 gcatattcac gatagatcgc acgcaccgca tcgacgtgtt ggtcgatcag tttaagcggg
     1741 atgcgggcgg tatcgggcgt gtactcgatc agccggcaaa gactctcagc cgcggatgcg
     1801 atggcgggat atccgaacgt cgccgcttcg cccttgatgt catgcgcggc gtgaaagagc
     1861 gcgtctgcat tggaccgggc gacatccttg gcgaaagcac ggcgggcctt gtccagccga
     1921 tcacattcgg aatccatcca actgccgaat tcacaggata gttgggcgag cgccttttca
     1981 gcccgcgcca cgggatcgtc atgcggttcg ccgggcgtgt tcgtcgacac tgcaccgctt
     2041 agtctgtttt ccggcgtaat cacctcgtga tcgccgtaag tgacgatcgc gattgcatcc
     2101 tttgcgtggc gcatcctttt cggtgtcttc atcagacggg ggcacgcgct ttttcgagca
     2161 acggcgtctg ccgaatgacg tcggccttgc cgccctttcg gcgctccgga ccgatatagt
     2221 tcgaattgac attgcgtcgc cgatccggtc cgaaataggt cttggtcttg atgaagggac
     2281 gcggattggc gactacgttg atgatgcgct ggtaaagtcc ctttgccgag attg
//
LOCUS       DATDHO010000407         2120 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_462651, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000407 DATDHO010000000
VERSION     DATDHO010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2120
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462651"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..930)
                     /gene="ftsZ"
                     /locus_tag="VIY07_07890"
     CDS             complement(<1..930)
                     /gene="ftsZ"
                     /locus_tag="VIY07_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEY6381712.1"
                     /translation="MTNIADIREMKARLTVFGVGGAGGNAINNMIAAGLQGVDFVVAN
                     TDAQALTRCKAQHIIQMGPRTTQGLGAGAQPEIGRAAAEEVVDAIRAHLAGAHMVFIT
                     AGLGGGTGTGAAPVIAETARELGILTIGVVTKPFHFEGQRRMRLAEAGIAELQKVVDT
                     LLIIPNQNLFRVAVEKTTFADAFAMADQVLYSGVACITDLIVKEGLINLDFADVRAVV
                     REKGKAMMGMGEASGENRVLTAAEAAISNPLIEDPSIKRASGLLISITGGKDMTLFEV
                     DEAAARIREEADQDANIIVGAIFDESLEGIVRVS"
     gene            complement(953..1447)
                     /locus_tag="VIY07_07895"
     CDS             complement(953..1447)
                     /locus_tag="VIY07_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381713.1"
                     /translation="MSVETLTYAALGARLKVSPEAARSLAKRVGLPRSRGPDGKVLVS
                     VDLAEIRHTPRPPSTRQADNIVLLTTKIETLQAEIARLETMVASHRIDFERERERADR
                     LMVELFQTSAETMAAKEATARLEGELAALRTGDRAASSQAQAARRLGHLAASIVEADR
                     KACR"
     gene            complement(1789..>2120)
                     /locus_tag="VIY07_07900"
     CDS             complement(1789..>2120)
                     /locus_tag="VIY07_07900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381714.1"
                     /translation="RTLDYLALIIRRFHHLPESLPVPSDFCTLIQFFDGMLGASPSRS
                     SGRREWRFISVYALEVSDLERLVVERLVRAIKPVRRKRSLAACRNPIRLQSIGRHRPN
                     ALLSAAN"
BASE COUNT          400 a          615 c          660 g          445 t
ORIGIN      
        1 cgacacgcgg acgatgccct ccagactttc atcgaagatg gcgccgacga tgatgttggc
       61 gtcctggtcg gcctcttcac ggatgcgagc agcggcttcg tcgacctcga ataacgtcat
      121 gtccttgccg ccggtgatcg agatgagcag gccgctggcg cgcttgatcg aggggtcctc
      181 gatcagcgga ttggaaatcg cagcctcagc ggcggtgagc acgcggtttt cgccggaagc
      241 ctcgcccatg cccatcatcg ccttgccctt ctcgcgcacg acggcacgca catcggcaaa
      301 gtcgagattg atcagacctt ccttgactat caggtcggtg atgcaggcca cacccgaata
      361 aagaacctgg tctgccatgg cgaaggcgtc ggcaaaagtg gtcttctcga cggctacccg
      421 gaacaggttt tggttcggga taatcagcag cgtgtccacc accttctgca gttctgcgat
      481 gccggcttcg gcaaggcgca tgcgccgctg gccctcgaag tggaatggct tggtgaccac
      541 gccaattgtg agaatgccta gctctcgcgc cgtctcagca ataacgggag ccgcgccggt
      601 gccggtgcca ccgcccaggc cggcggtgat gaacaccatg tgtgcgccag ccaaatgagc
      661 acggatcgca tcgacgactt cttcggctgc ggcgcgtcct atttcaggct gcgcgccagc
      721 gccgaggcct tgggtcgtcc gagggcccat ttggataatg tgctgtgcct tgcacctggt
      781 gagcgcctgg gcatcggtgt tggcgacgac gaaatcaacg ccctgcaggc cggccgcgat
      841 catgttgttg atggcattgc cgccggcgcc gccgacgccg aacacggtaa ggcgtgcctt
      901 catctcgcga atgtcggcga tgttagtcat gtgtgcctca caagaggggt cgtcacctgc
      961 aggccttgcg gtctgcctcc actatggacg cggctagatg tcccagtcgg cgtgcagctt
     1021 gtgcttggga actggccgct cggtcaccgg tccgcagagc ggccagttcg ccttcaagtc
     1081 gcgccgtcgc ttccttcgct gccatggtct cggcactcgt ctggaacagc tccaccatca
     1141 ggcggtctgc gcgctcgcgc tcgcgctcga agtctatccg atgacttgcc accattgttt
     1201 cgagccgcgc gatctccgcc tgcaatgtct cgatttttgt cgttagcaga acgatgttgt
     1261 ctgcctggcg agtgcttggg ggtcggggcg tgtgccgtat ctcagcgaga tcgacgctca
     1321 ccaggacttt gccgtccggc ccgcgtgagc gtggcaatcc gactcgctta gcgagcgaac
     1381 gagcggcctc tggtgagact ttgaggcgag cacctagcgc agcatatgtc agcgtttcga
     1441 cggacattgg ctctccagga ataaaccgag tggtaatggg ctgatgaccg ggcgatgacc
     1501 gcaggctagg ctgtgttggt taatggcccg ttaacgggcg agcggcgatc tgccatcagg
     1561 cgttgcggcg tgccgggtca acggttgaaa atttgaaggt cgtgtcgaat tcgctctcag
     1621 ttttagcttg cctaccagac atgttgagag cggtgggtaa gcagcacgag cgttttcgtt
     1681 aatagcgccg cctccgacac cgggcaggca ggcagcagtg gtttgtgggc cggcgtcccg
     1741 ccacgtcgcc aatatttttt tcattcgatg aggggggcca aagaatgttt aattggccgc
     1801 tgaaagtaaa gcgttgggcc ggtgccgccc gatggattgg agacgaattg gattccgaca
     1861 ggcggcaaga gaccgcttcc ggcgtaccgg ttttatggcc cggacgagcc gttctacaac
     1921 aagacgttca agatcgctga cttcgagcgc gtagactgag atgaagcgcc attcacggcg
     1981 accactcgat cgcgacgggc ttgctccaag cattccgtca aaaaactgga tcaaggtaca
     2041 aaaatccgaa ggcaccggta gcgactcggg caagtgatgg aaccttctaa taatcagagc
     2101 gagataatct agcgtcctaa
//
LOCUS       DATDHO010000408         3368 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_19821, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000408 DATDHO010000000
VERSION     DATDHO010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3368)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3368)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3368
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19821"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1005
                     /locus_tag="VIY07_07905"
     CDS             <1..1005
                     /locus_tag="VIY07_07905"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEY6381715.1"
                     /translation="GIVAAFTPWNFPTLTPVRKIAGALAAGCSIIIKASEETPGGCVE
                     LVKCFADAGLPAGVLNLVFGVPAEVSEHLIPQKAVKKISFTGSVPVGKHLAGLAAKGM
                     KKATMELGGHSPVVVFDDADPEKTADTIAAFKYRNAGQVCISPTRFYVHEKNYSKFLA
                     RFTEYAKGLKLGDGLEKGVTLGPLANPRRLDAMESFVNDAKDRGGKIVTGGARHGNQG
                     FFYEPTVITDVPDDSKIMTEEPFGPVAPIVTFKTFDEVVERANSLQFGLAAYAFTSSE
                     KNAAAISDALQSGMVGVNSVAISTPETPFGGVKESGYGSEGGIEGLQAYMNVKFISQA
                     "
     gene            complement(1174..>3368)
                     /locus_tag="VIY07_07910"
     CDS             complement(1174..>3368)
                     /locus_tag="VIY07_07910"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY6381716.1"
                     /translation="HAHARVVSVNTEEARKAKKVLAVLTAADMKAANVGSVSRHPPVQ
                     GRAGAKMIMPFRPSLAGEKVMHVGDPVAMVVAETLAAAQDAADLVQVEYAELPAVISL
                     DDAMKDGATQLYSEAPGNLCVDWPGPVPDEQNERDVAGIIASAPHVAKVRVANQRMVV
                     ASMETRGATGVYDKASDAYTLYVCSQSADSLRNLTAAVMGVPNEKLRVITEDVGGAFG
                     MKTPPYPEYPALLVAARTFGRPVRWQSTRSEAFVTDTQARDTVTEAELAIDDKGKFLA
                     LRVRHLCNQGAYVSTAGININTNNFARCLPGMYRIPKVDVSVACYFSNTTPIGPYRGA
                     GRPEANYALERLVEEAARVTGIAPVRLRKKNLIPPSAMPFKTPINTYDSGDFPAIVDR
                     ALELADFDNFNKRRRESAKRKKLRGIGVSCMLEHAGAMPMEQASLSFPGGDQLILGCN
                     VQSTGQGHATVFPRLLASKLGIDPAKIQHRHGDTALGLTGFASVGSRSAMCAGSAIVH
                     NADVMLTKGKKLASALLEASEADIQYRNGSFEVVGTDRKISLFETARRAKEKGESLDT
                     REKIETPLTFPNGCHIAEVEIDPDTGAVDLVAYTAVDDPGVMLDQMIVEGQVQGSIAN
                     GLGQALTENAVYDAGSGQLIAGSFMDYGMPRAHHMPVELREAVHSVPATSNPLGVKGT
                     GEAGTTAAIAAVMNAISNAIPNGAADHMDMPATPAKVWAACQRGLAAK"
BASE COUNT          592 a         1052 c         1058 g          666 t
ORIGIN      
        1 gggattgtcg cggcgttcac gccgtggaat ttcccgacgc tgaccccggt ccgaaagatt
       61 gcgggtgcat tggcggccgg atgttccatc atcatcaagg cctcggaaga gacaccaggc
      121 ggctgcgtgg agctggtgaa atgtttcgcc gatgccggcc tgccggcagg cgtgctcaat
      181 ctcgtctttg gcgtgccggc ggaagtatcc gagcacctta ttccacagaa ggccgtgaag
      241 aagatttcct tcaccggctc ggtccctgtc ggaaagcatc tggccggact ggccgccaag
      301 ggcatgaaga aggcgaccat ggagcttggc ggtcactcac ccgtcgttgt gttcgacgat
      361 gccgaccccg agaaaaccgc ggacaccatc gcggcattca agtatcgcaa tgccggccag
      421 gtctgcatct cgccgacacg cttctacgtg cacgagaaga actacagcaa gtttttggcg
      481 cgcttcaccg agtacgccaa gggtctgaaa ctgggcgacg gccttgagaa gggcgtaacg
      541 ctgggcccgc ttgccaatcc gcgccggctc gacgcgatgg aaagtttcgt caacgatgcc
      601 aaggaccgcg gcggcaagat cgttaccggc ggcgcgcgtc acggcaacca gggcttcttc
      661 tatgagccga ccgtcatcac cgacgtgccg gacgactcca agatcatgac cgaggaaccg
      721 ttcgggccgg ttgcgccaat cgtgaccttc aagaccttcg acgaagtggt cgagcgcgcg
      781 aactcgctgc agttcggtct cgctgcctac gcgtttacga gctccgaaaa gaatgccgcg
      841 gcgatcagcg acgcgctgca gtccggcatg gtgggcgtga acagcgtggc aatttcgacg
      901 cctgagacgc cgttcggcgg cgtcaaggaa tcgggctacg gttctgaagg cggcatcgaa
      961 ggcctgcagg cctacatgaa cgtcaagttc atctcgcagg cgtagtcatt tgtcatgccc
     1021 ggtcttgtgc cgggcatcca cgtcttgccc agcgttaaga cgtagatggc cgggacaagc
     1081 ccggccatga cctttaggct gggtccccgc ttccgcgggg acgaacggag ttgggtcgtc
     1141 cggccttttc ctcaatcggg tcgtccggtc aaattacttc gccgccaagc ctcgttggca
     1201 ggccgcccag acctttgcgg gcgtcgcggg catgtccata tggtcggcgg cgccgttggg
     1261 gatcgcgttg gaaatcgcat tcatcaccgc ggcgatcgca gcagtggttc cggcctcgcc
     1321 ggtgcccttc acgcccaacg ggttgctcgt cgcgggcacc gaatgcaccg cttcgcgcag
     1381 ttcgacgggc atatggtgag cgcgcggcat gccatagtcc atgaaagagc ctgctatcag
     1441 ctgcccactg ccggcgtcgt agaccgcgtt ctcggtcagg gcctggccca gcccgttcgc
     1501 gatcgagccc tgcacctggc cttcgacaat catctgatcg agcatcacgc caggatcgtc
     1561 gaccgcggtg taggcgacga gatcgaccgc gccagtgtcg ggatcgatct cgacttcggc
     1621 aatatgacag ccgttcggaa acgtcagcgg cgtttcaatc ttttccctgg tatcgagact
     1681 ttcgcctttt tcctttgcac gccgtgccgt ttcgaacagc gagatcttgc ggtcagtgcc
     1741 gaccacctcg aagctgccgt tgcgatactg gatgtcagcc tccgaggctt ccagcagcgc
     1801 tgatgccaac ttcttgccct tcgtgagcat cacgtcagcg ttgtgcacga tagcgctgcc
     1861 ggcgcacatg gccgagcgcg agcccaccga ggcgaatccc gtcaacccca gtgcggtatc
     1921 gccatgacgg tgctgaatct ttgccggatc gatgcccagc ttgctggcga gcagtcttgg
     1981 aaacaccgtt gcatggccct ggccggtcga ttggacgttg cagccaagaa tgagctggtc
     2041 gccgcccggg aaggacaggg aagcctgctc catcggcatc gcgccggcat gctccagcat
     2101 gcaggatacg cctatcccgc gcagcttctt gcgtttcgcc gattcgcggc ggcgcttgtt
     2161 gaagttgtcg aaatcggcga gctccagcgc cctgtcgacg atggcgggga aatcgccgct
     2221 gtcataagtg ttgatcggcg tcttgaacgg catggccgac ggcggaatga gattcttttt
     2281 gcgcagtctg accggagcga tgccggtgac gcgcgccgct tcctccacga ggcgctcaag
     2341 agcgtagttc gcttccggtc gcccggcgcc gcggtaaggt ccgatggggg tcgtgttgct
     2401 gaagtagcag gcgaccgata catcgacctt cggaatccgg tacatgccgg gcaggcagcg
     2461 cgcgaaattg ttggtattga tgttgatccc ggcggtgctg acgtaagctc cctgattgca
     2521 caagtggcgc acgcgtagcg cgaggaattt gcccttgtcg tcgatcgcga gttcagcctc
     2581 ggtgacagta tcgcgcgcct gggtgtcggt cacgaacgcc tccgaacgcg tcgactgcca
     2641 ccggactggt cggccgaacg tacgggcggc taccagcagg gccggatatt ccgggtaagg
     2701 cggcgttttc atgccaaatg cgccgccgac gtcctcggta atcacgcgca gtttttcgtt
     2761 cggaacaccc atgaccgcag cagtaagatt gcgcagggag tcagcgctct gcgagcagac
     2821 gtaaagcgtg taggcgtcgc tcgccttgtc atagactccc gttgcgccgc gcgtttccat
     2881 ggacgcgacg accatgcgct gatttgcgac gcggaccttt gccacatgcg gagcgctggc
     2941 gataatgccc gcgacgtcgc gctcgttctg ctcgtctggt acggggccgg gccaatccac
     3001 gcaaaggttc cccggagctt ctgaatagag ctgggtcgcg ccgtccttca tggcatcgtc
     3061 caggctgatc accgccggca attccgcgta ttcaacctgc accaggtctg ccgcgtcctg
     3121 ggcggcggcg agcgtctcgg cgaccaccat cgcgaccgga tcgccgacat gcatcacctt
     3181 ctcgccggcg agcgatggac ggaatggcat gatcatcttt gccccggccc ggccctggac
     3241 cggcggatgc cgggatacgc tgccgacgtt cgccgccttc atgtctgcgg ccgtcaacac
     3301 ggccagaacc ttcttggcct tgcgcgcctc ttcggtattg acggaaacga ctcgcgcatg
     3361 cgcgtgcg
//
LOCUS       DATDHO010000409         2268 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_462708, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000409 DATDHO010000000
VERSION     DATDHO010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2268)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2268)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2268
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462708"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1324
                     /gene="ffh"
                     /locus_tag="VIY07_07915"
     CDS             <1..1324
                     /gene="ffh"
                     /locus_tag="VIY07_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEY6381717.1"
                     /translation="QMVVKIVHDQLVATLGADSQSIDLHAAPPVAIMMVGLQGSGKTT
                     TTAKLARRLNDRQHRKVLMASLDVRRPAAMEQLAVLGRDAQIDTLPVVEGQTPSQIAR
                     RAIEAAKLGGYDVVMLDTAGRTTLDDAMMSEATEVKRAVNPHEVLLVADALTGQDAVN
                     LARSFDERVGLTGIVLTRVDGDGRGGAALSMRAVTGKPIKLIGTGERLDALEDFDPTR
                     IAGRILGMGDIVALVEKAAANIDAEKAMRAAEKMRKGAFDLADLRDQLAQMQGMGGLG
                     GLMSMLPGIGKLKNQLANANIDENVIKRQIAIIDSMTPKERRNPDILKASRKRRIAAG
                     SGTTPEAINKLLKMHRGMADMMKMMGGAKRGPLAGLAQAMGIGSAMPSPEQLAEMAKN
                     IPGGQLPPGMPGLPPTMPKLPNTPGLPGLGGKFPGLPGGLPPGFGKKK"
     gene            1357..1758
                     /gene="rpsP"
                     /locus_tag="VIY07_07920"
     CDS             1357..1758
                     /gene="rpsP"
                     /locus_tag="VIY07_07920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006136856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEY6381718.1"
                     /translation="MSLVIRLARAGTKKRPIYHVVVADNRAPRDGRFIERLGYFNPLL
                     PKEKTERLRLDLEKVQAWMKKGAQPSDRVMRFLDAAGIMKRPKRNNPEKAIPRKERKA
                     KEEEAAKAAEGGAKPAAKAETPADAPAPAAS"
     gene            1777..>2268
                     /gene="rimM"
                     /locus_tag="VIY07_07925"
     CDS             1777..>2268
                     /gene="rimM"
                     /locus_tag="VIY07_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734828.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEY6381719.1"
                     /translation="MADRVCVARIGAAHGVRGEVKLWSFTQDPAAVASYGPLETQDGT
                     RCFEIEALRQAKDHFVARIAGVANRDAAEQLRNLELYIPRARLPHIEEGDTFYHADLV
                     GLDAVTPEGTQVGTVHALHNFGAGDIIEIMPLGSGEPLMLPFNEATVPKIDLEAKQIV
                     IVPP"
BASE COUNT          480 a          701 c          716 g          371 t
ORIGIN      
        1 ccagatggtc gtcaagatcg tgcatgatca actggtcgca acactgggcg ccgacagcca
       61 gagcatcgat cttcacgccg cgcctcccgt tgccatcatg atggtgggcc tccagggttc
      121 cggcaagacg accactactg cgaagctggc cagacgtctg aacgacaggc agcaccgcaa
      181 ggtgctaatg gcttcgctcg acgttcggcg tcccgcggca atggagcagc tcgccgttct
      241 tggccgcgac gcgcaaatcg acacgctgcc tgtggtcgaa gggcagacgc cgtcacaaat
      301 cgcgcggcgc gcaatcgagg ccgcaaaact tggcggctac gatgtggtga tgctcgatac
      361 cgccggccgc accacgctcg atgacgcgat gatgagcgaa gcaaccgagg tcaagcgcgc
      421 ggtcaatccg cacgaggtgc tcctcgtcgc cgacgccctg accggccagg atgccgtcaa
      481 tctcgcacgc tcattcgatg aacgcgtggg cctgaccggc atcgtgctta cccgcgtcga
      541 tggcgacggc cgagggggcg cggcactgtc catgcgcgcg gtgacgggaa agccaatcaa
      601 actgatcggc actggcgaaa gactcgatgc gcttgaggat ttcgatccaa cccgcattgc
      661 cggccgaatc ctcggcatgg gcgatatcgt cgctctggtt gagaaagcag ccgccaatat
      721 cgatgccgag aaggcgatgc gggccgccga gaaaatgcgc aagggcgcat ttgatctcgc
      781 cgacttgcgc gatcagcttg cgcaaatgca gggcatgggt ggcctgggcg gtctgatgag
      841 catgctgcca ggcatcggca agctgaagaa ccagcttgcc aatgccaata tcgatgaaaa
      901 tgtcatcaag cgtcagatcg cgatcatcga ctcgatgact cccaaggagc gacgcaaccc
      961 ggacattctc aaagccagcc gcaagcggcg gatcgcagcc ggttcaggca cgacccccga
     1021 ggcgatcaac aagctcctga agatgcatcg cggcatggca gacatgatga agatgatggg
     1081 cggtgcaaaa cgcggtccgc ttgcaggcct agcccaggcc atggggatag ggagcgccat
     1141 gccgtccccg gaacagctgg cggagatggc aaagaacatc cctggcggac aactgcctcc
     1201 tggcatgccc ggcctgccgc cgaccatgcc gaagctgccg aacacgcccg gcctgcctgg
     1261 ccttggcgga aagtttcctg ggttgcctgg cggtcttcca cctggtttcg gaaaaaagaa
     1321 gtgatcaacg atcaatagag tgagaaagga ctgaagatgt ctctcgttat tcgtcttgcc
     1381 cgcgccggca ccaagaagcg cccgatctat catgtcgtgg tcgctgacaa tcgcgctccg
     1441 cgcgatggcc gcttcatcga acggctcggc tatttcaatc cgctgctgcc gaaggaaaaa
     1501 accgagcgtc tcaggctcga tctcgaaaaa gtgcaggcct ggatgaagaa gggtgcccag
     1561 ccgtcggatc gcgtcatgcg tttcctcgat gccgccggga tcatgaaacg gccgaagcgc
     1621 aacaatccgg aaaaggcgat ccctcgcaag gaacgcaagg ccaaggaaga agaagccgcg
     1681 aaggctgctg agggcggcgc caagccggcc gccaaggccg agacgcccgc cgacgcaccc
     1741 gcgccggccg cgagctgact ctcgtaacgt cgcgccgtgg ccgaccgtgt ctgcgtcgcc
     1801 cgcatcggtg ccgcgcacgg cgtgcgcggc gaagtgaagc tttggtcctt cacgcaagac
     1861 ccggcggcgg tcgcaagcta cggtccgctg gaaactcaag acggcacgcg atgcttcgag
     1921 atcgaggcgc tgcgtcaggc gaaagatcat ttcgtcgctc gcatcgccgg tgttgccaac
     1981 cgcgacgctg cggagcagct gcggaacctt gaactgtaca ttccgcgcgc gcggctgccg
     2041 cacatcgagg aaggcgatac gttctatcat gccgacctgg tcgggctgga cgccgtgacg
     2101 ccggagggta cccaggtcgg cacggtgcat gcgctgcata attttggcgc cggcgacatc
     2161 atcgagatca tgccgctcgg aagcggcgag ccattgatgc tgccgttcaa cgaagcgact
     2221 gtgccgaaga tcgatctcga ggcgaagcag atcgttattg taccgcct
//
LOCUS       DATDHO010000410         1513 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_218220, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000410 DATDHO010000000
VERSION     DATDHO010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218220"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..519)
                     /locus_tag="VIY07_07930"
     CDS             complement(<1..519)
                     /locus_tag="VIY07_07930"
                     /inference="COORDINATES: protein motif:HMM:NF020976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HEY6381720.1"
                     /translation="MPLRFTPSEPGRVYRKISYGPLLDLFMLDMRSYRGPNKAPHEIQ
                     YGPDAYLLGPAQLAWFKRELKRSTAIWKVIASDTPLGIIAASSPNVGTTAGRGVEIAE
                     LLAFMQHAGIRNTVWITADLHYTAAHFFDPNKAIFQDFEPFWEFVSGPIHAGTWTPCA
                     LDRTFGPSVVFQS"
     gene            complement(524..889)
                     /locus_tag="VIY07_07935"
     CDS             complement(524..889)
                     /locus_tag="VIY07_07935"
                     /inference="COORDINATES: protein motif:HMM:NF020976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HEY6381721.1"
                     /translation="MRTYATMLRNRPDFFVHCGDSIYADCTIPAQQKLPNGETWRNIV
                     TEEKSTVATTLAGYRGNYKYNLLDANLREFNAKVPIFAQWDNHEVMEDWWPGETFDRR
                     GYDIKKHAAACRARKPCVS"
     gene            complement(906..1391)
                     /locus_tag="VIY07_07940"
     CDS             complement(906..1391)
                     /locus_tag="VIY07_07940"
                     /inference="COORDINATES: protein motif:HMM:NF027966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoD-like phosphatase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6381722.1"
                     /translation="MSGHLRAGSATRRRFLMTVASATATTALGTIALPAFSRSSQRPV
                     ITHGVQSGDVSTDSGMVWARADRPARMLIEASTSDSFKDVCHASFVDALPETDFTAKA
                     LLENLPAGQDIFYRLRFQDLLSGQAISEPAVGQLRTAPADRRSISFVWSGDTAGQGWG
                     H"
BASE COUNT          313 a          432 c          469 g          299 t
ORIGIN      
        1 gctctgaaac acgactgatg ggccgaacgt gcggtcgagc gcgcacggag tccatgttcc
       61 cgcgtggatg ggaccggaaa cgaattccca aaaaggctca aagtcctgga atattgcctt
      121 attgggatcg aaaaaatgcg cggctgtgta atgcaggtcg gcggtgatcc ataccgtgtt
      181 gcgaatgccg gcgtgctgca tgaaggctag cagttctgcg atctcgacgc cgcgaccggc
      241 cgttgtgccg acgttgggcg agctggcggc gatgataccc agcggagtgt cggacgcgat
      301 gaccttccag attgccgtgg aacgcttgag ctcccgtttg aaccaggcga gctgcgcggg
      361 gccgagcagg taagcgtcag gaccatactg aatttcatgc ggcgctttgt ttggtccgcg
      421 gtagctgcgc atgtcgagca tgaacagatc gagcagcggc ccataggaga tcttccgata
      481 cacgcgacct ggctccgatg gcgtgaagcg caggggcatg aactcatgaa acgcacggct
      541 tccgagcgcg gcaagcagca gcgtgttttt ttatgtcgta gccgcggcga tcgaacgttt
      601 caccgggcca ccagtcctcc ataacctcat ggttgtccca ctgggcaaaa atgggcacct
      661 tggcattgaa ctcccgcaaa ttcgcgtcga gcaggttgta tttgtaattg ccacggtagc
      721 cggcgagagt cgttgcgacc gtgctttttt cctcggtgac aatattgcgc cacgtctcgc
      781 cgttgggcag cttctgttgt gcgggtattg tgcagtcggc atagatgctg tcgccgcaat
      841 gaacgaagaa gtccgggcga tttcgcagca tcgtcgcgta ggtgcgcatg ccgccgcgtg
      901 ccgggtcaat gcccccagcc ttgcccggcg gtatcgcctg accacacaaa cgaaatcgac
      961 cggcgatcag ccggcgctgt acgaagctga ccgacagccg gttcgctgat cgcttgcccc
     1021 gacaacagat cctgaaagcg caatcggtag aagatgtcct gccctgccgg caagttctcg
     1081 agcagcgcct tggcggtaaa gtcagtttcg ggcagcgcgt caacgaacga tgcgtgacaa
     1141 acatctttga aactgtcgct tgtcgatgcc tcgatcagca ttcgtgctgg gcggtcagcg
     1201 cgcgcccaca ccattcccga atcggtcgac acatcgcccg attgcacgcc atgcgtaata
     1261 accggtcttt gcgacgagcg gctgaaagct ggtaatgcga tggtgccgag tgcggttgtg
     1321 gccgtcgccg aagcaacagt catcagaaac cggcggcgcg tcgcgctgcc ggcacgcaag
     1381 tgcccggaca tgaagtgacc tccgccgaat cagcgcggaa ggtgcacaca gtttctgaca
     1441 actggaaaaa gctaaaacga cgggtttgta actcccgggt caagcgccgg caggccggct
     1501 ccatggaccg atg
//
LOCUS       DATDHO010000411         3808 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_416019, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000411 DATDHO010000000
VERSION     DATDHO010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3808
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416019"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..717)
                     /locus_tag="VIY07_07945"
     CDS             complement(<1..717)
                     /locus_tag="VIY07_07945"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase transmembrane
                     domain-containing protein"
                     /protein_id="HEY6381723.1"
                     /translation="MRRTLLLLAKAVISVLLLYFSLRWVNVSTLGDRLTRLQPAWMAL
                     ALFFLTIQVAFLAARWQKIAAACGAKLAYGSALQLSFIATFFNQVLPSTVGGDGARIW
                     FFARQGAGWARATYSVLVDRIVGVLVLALFVLACLPWTMKLIHDPIARTVISTIGLGA
                     VAGSIVFVLMGTRFRAWLDHWTLTRHLSAAAGVAATLCHSPLSMSYVIGCSIVIHLLT
                     IVSAWCCIMAIAAPVSFVQVL"
     gene            947..1933
                     /locus_tag="VIY07_07950"
     CDS             947..1933
                     /locus_tag="VIY07_07950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronic acid decarboxylase family
                     protein"
                     /protein_id="HEY6381724.1"
                     /translation="MHIQQRILVTGGAGFLGSHLCERLLAEGGDVLCADNFFTGTRKN
                     IEHLLDHKHFELMRHDVTFPLYVEVDEIYNLACPASPIHYQRDPVQTTKTSVHGAINM
                     LGLAKRVKAKILQASTSEVYGDPHVHPQPEEYWGHVNPVGPRSCYDEGKRCAETLFFD
                     YLRQHNLRIKVARIFNTYGPRMHPNDGRVVSNFVTRALLGRDLTVYGDGTQTRSFCYV
                     DDLIDALVKLMATPDRVTGPINIGNPSECSMVELAALIIELTGTRSRTVHRPLPENDP
                     RQRRPDISRAQELLAWAPHTRLRDGLIRTISYFEKLLSENEVRAALIASEAG"
     gene            2106..3341
                     /locus_tag="VIY07_07955"
     CDS             2106..3341
                     /locus_tag="VIY07_07955"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HEY6381725.1"
                     /translation="MNIASTKTAPSSSSTAKRADVTVVGGAGHVGIPLALAFAEAGLT
                     VNLNDTNETALATLKSGKLPFIEHGAAPLLARALAGNKLLFSSSPDATGCTGPVIITI
                     GTPVDEFLNPVQSEVQRCVDSLLPHLADDQLLILRSTVYPGTTDWLQDYLRRLGRRNS
                     VAFCPERVVQGYKELREMPQIVSATTENAEREATEIFRLIAPELVVVKPIEAEFAKLF
                     NNAYRYIEFAASNQFYMIAKSAGADYQSIMRAMKQNYPRARSFPGPGFSAGPCLFKDT
                     MQLVAYARNQFGLGHAAMQVNEGLVLQLVDDLRRAYKISEMTVGLLGMAFKAEIDDTR
                     ASLSYKLKRNLQMCAHKVLTTDPFVTCDPHILPLEQVVEGSDILILCTPHSVYAEADL
                     KGKPVVDVWGFLKNANVVY"
     gene            3436..>3808
                     /locus_tag="VIY07_07960"
     CDS             3436..>3808
                     /locus_tag="VIY07_07960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HEY6381726.1"
                     /translation="MIRLLRLTSRQILIILHDLLATAAAIVVTFLVRFEDLALNERLR
                     GLVLFLPFFLLYAAVIYFFIGLHRNKWRFTSIPDLYNLFRASTVLAISLLALDYILVA
                     PNLYGTFFFGKITILLYWFLQM"
BASE COUNT          808 a         1142 c         1079 g          779 t
ORIGIN      
        1 caggacctgt acgaaactaa caggcgcggc gatggccatg atgcagcacc aggccgagac
       61 gatcgtgagc aaatggatca cgatcgagca tccaatgaca tagctcatcg acaaaggtga
      121 gtggcacaag gttgccgcga cgccggccgc cgccgacaaa tggcgcgtca gtgtccaatg
      181 atccagccat gcccgaaagc gcgtgcccat cagcacgaag actatgctgc cggcgactgc
      241 gccaagtccg atcgtcgata ttaccgttcg ggcgatagga tcgtggatca gtttcattgt
      301 ccagggcagg catgcaagga cgaacaaggc caacaccaac acgcccacga tcctgtcaac
      361 caataccgag taggtcgccc gtgcccagcc ggctccttgg cgcgcaaaaa accaaatgcg
      421 cgcgccatcg ccgccaaccg tcgatggcag cacctgattg aaaaaggtgg cgatgaagct
      481 cagttgcagc gccgatccat atgccagctt cgctccgcac gcggctgcaa ttttttgcca
      541 gcgtgccgca agaaaggcga cctgaattgt caggaaaaac agcgcaagcg ccatccatgc
      601 cggctgcaag cgggttagcc gatcgcccaa tgtgctgacg ttaacccaac gcagtgagaa
      661 atagagcagc aggacggaga tgaccgcttt ggccagcaat aatagcgtgc ggcgcatcgg
      721 cgcgaaatcc tggacgcaaa ttggtgatca cgtgggatgg acggacggct ttcgcatgcc
      781 ctatccgacg atgcaagtgg ggtcgtctga cggtacccga tcgatcgaac ggaggtcgac
      841 ggaaccggca taaaaaagat cggatttagg gcacggcccg agcccgaaat gcggcattca
      901 tgccagtcgg gcgctgtgat agaacttcgg tgacgatcgg ggcctcatgc atattcagca
      961 gcgaatcttg gtgaccggcg gggccggatt tctaggctcc catctttgcg agcggcttct
     1021 cgcggaaggc ggcgatgtcc tctgcgccga caactttttt accggcaccc gaaagaacat
     1081 cgagcatctt ctcgaccaca agcatttcga attgatgcgg cacgacgtga cgttcccgct
     1141 ctacgtcgag gtcgatgaga tctataacct cgcctgtcct gcctcgccca ttcattacca
     1201 gcgcgatccg gtgcaaacga ccaagaccag cgtccatggc gcgatcaaca tgcttgggct
     1261 tgcaaagcgc gtaaaggcga aaattctcca ggcatccact tctgaagtct atggcgatcc
     1321 tcatgtccat ccgcagcccg aagaatactg gggtcacgtc aatccggtcg gccctcgatc
     1381 ctgttatgac gaaggcaaac gctgcgccga gacattattt tttgactatt tgcgccagca
     1441 caatttgagg atcaaggtcg cgcgcatatt caatacgtat ggtccacgca tgcatccgaa
     1501 cgacggacgg gtggtttcca atttcgttac gcgggcccta ctcggccgcg atctgacggt
     1561 gtacggggat ggcacccaga cgcgctcttt ctgttatgtc gatgatctga tcgacgcgct
     1621 ggtgaaactg atggcaacgc cggatcgggt aacaggtccg atcaatatcg gcaacccgag
     1681 cgaatgctca atggtcgaac tggcagccct gatcatcgag ttgaccggaa cccgatcgcg
     1741 cacggtgcat cgtccgctgc cggagaacga tccgcgtcag cgccgcccgg atatttcgcg
     1801 cgcgcaagaa ctgttggcct gggcgccgca cactcggctg agggatggat tgatccggac
     1861 gatttcttac ttcgaaaaac tgttgagcga gaacgaggtg cgtgcagcct tgatagccag
     1921 cgaggccggc tgatagcctc cgcgcgccat aatgattttg tcgcgaaata gactgttgcc
     1981 cggctcgcga aatttgctag ctaagtgatt ggaaatctgg ccatttgagc ctggtgcacg
     2041 agaccagggg aagcccgcgg cgatttgcta ggataattgc cgcatccgcc ggcaaagggg
     2101 atcagttgaa tatcgcatcg accaaaacgg cgccctcaag ctcgagcacc gcgaagcgcg
     2161 ccgacgtcac ggttgtcggc ggggcgggcc atgtcggcat tccgctggcc ctcgcgtttg
     2221 ccgaggccgg cctgaccgtc aacctgaacg ataccaacga gacggcgctg gcgacgctga
     2281 aatccggaaa attgccgttc atcgagcatg gtgcagcgcc gttgcttgcc agagcacttg
     2341 ccggcaacaa gttgcttttc agctcatcac ccgacgcgac cggatgtacg ggcccggtca
     2401 tcatcaccat cggcacgccg gttgatgaat tcctcaatcc cgtacagtcc gaggttcagc
     2461 gctgtgtgga cagcctgttg ccgcatcttg ccgacgatca attgctgatc ctccgatcga
     2521 cggtctaccc ggggaccacc gattggctgc aggactacct ccggcggctc ggccgccgga
     2581 acagcgtggc tttctgtcct gaacgcgtgg tgcagggcta caaagagctt cgcgagatgc
     2641 cccagatcgt cagcgccacc acggagaatg cggaacggga ggcgaccgaa atattcaggc
     2701 tgattgcgcc cgagctcgtg gtggtaaagc cgatcgaggc cgagttcgct aaactattca
     2761 acaacgccta ccgctacatc gaatttgctg ccagcaacca gttctacatg atcgcgaaat
     2821 cggccggcgc cgactaccag tcgatcatgc gcgcgatgaa gcagaattat ccgcgcgcga
     2881 gaagttttcc cggacctggc ttctcggctg gcccttgcct gttcaaggac accatgcagc
     2941 tcgttgccta tgcgcgcaat caattcggcc ttggccatgc tgcgatgcag gtcaacgaag
     3001 gcctcgtgct gcagttggtc gatgacttgc ggcgtgccta caagatctcg gaaatgaccg
     3061 ttggcctgct gggaatggcc ttcaaggccg agatcgacga cacccgcgcc tcgctcagct
     3121 acaagctcaa gcgcaacctg caaatgtgcg cgcacaaggt cctgaccacg gatccgttcg
     3181 tgacgtgcga tccgcacatt ctgccgctcg agcaggtcgt cgaaggcagc gatatcctga
     3241 tcctgtgcac cccgcactcg gtctatgccg aggcggatct caagggcaag cccgtcgtcg
     3301 acgtctgggg ctttctcaag aatgcgaacg tcgtctactg agcatgccgt cctgcgtgaa
     3361 tattttcgcc ctggcccgtc atgaaggttg cctcctgccg gggctcattc gcgcttggcg
     3421 ctgtcgaggg ccgagatgat ccgtttgctt agactcacct cgcgccaaat cctgatcatc
     3481 ctgcatgatc tattggccac cgctgccgcg atcgtggtca cgttcctggt gcgcttcgag
     3541 gatttggccc tcaacgaacg gctgcgcggg ctggttctgt tccttccatt tttcctgctc
     3601 tacgccgcgg tcatctattt cttcatcgga ttacatcgca acaagtggcg cttcacgtcg
     3661 atcccggacc tctacaatct gttccgggcg tcgaccgtcc ttgccatttc gctgctcgcg
     3721 ctcgattaca tcctggtagc cccgaatctt tacggcacat tctttttcgg caagatcacc
     3781 attcttctct actggttcct gcagatgt
//
LOCUS       DATDHO010000412         3454 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_119441, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000412 DATDHO010000000
VERSION     DATDHO010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3454)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3454)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3454
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119441"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..293)
                     /locus_tag="VIY07_07965"
     CDS             complement(<1..293)
                     /locus_tag="VIY07_07965"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HEY6381727.1"
                     /translation="MKIAVIDDYQDAFRMLRCYAKLDGHEVLIYEDTEKDPARLAERL
                     KEVEAVILTQARSPFPRALIERLPRLQLVSQTGRSTGHIDIDACTEHGVVVSAA"
     gene            614..1588
                     /locus_tag="VIY07_07970"
     CDS             614..1588
                     /locus_tag="VIY07_07970"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6381728.1"
                     /translation="MDYKVKSLSVMIVVGAVALCSGIATAQGYPAKPVRLIIPFPPGG
                     SNDIVGRFIATKLTERLGKQVVADNRGGAGGVIGTEAAAKSEPDGYTLLIISSAYSIN
                     TSLYKLPYDPVKAFTPIAKLGTGPNVFAVHPGVPVNSVKEFIALAKEKPGQLNFAAAG
                     VGSFQHLGSELFKSMTGVDVGIVQFKGGGPAMIDVIGGHTHAALGSLIQFMPHIKSGK
                     VKALGTGGAKRSVSLPDVPTIAEAGVPGYEANNWWGIITPAGTPRPIVDRLYKEISAV
                     LSSAETQKVFGDQGAEVDIMTPTEFGPYIVAETAKWGKVIKEANIKAE"
     gene            1771..2223
                     /locus_tag="VIY07_07975"
     CDS             1771..2223
                     /locus_tag="VIY07_07975"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY6381729.1"
                     /translation="MKIELRSNKDFWAGIMLIAFGAASIIIARGYPFGSTMRMGPGYF
                     PSMLGGIVALFGLYIMIIGLRRGEKMTVHCSTWALIVLPFSLIAFGVLMTHAGFIPAM
                     AVLIFGSASAGRDFKFGEVLLLTAILTGLSVAIFIVGLGLPYPLIKGF"
     gene            2234..>3454
                     /locus_tag="VIY07_07980"
     CDS             2234..>3454
                     /locus_tag="VIY07_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014762986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY6381730.1"
                     /translation="MELFNHLIFGFSVALSLQNLVYCFIGVLVGTLIGVLPGIGPLAT
                     IAMLLPLTFNVPPVAAMIMLAGIYYGAMYGGSTTSILVNLPGETAAVITCIDGYQMAR
                     QGRAGAALAIAAIGSFFAGTVCTLLIALFAPPLGEFALKFSSAEYFSLMLMGLVAAAV
                     LSHGNMVKSLAMVVVGLLLGIVGADVNSGIKRFTFGFYELADGIGVVTIAVGVFAVGE
                     ILCNLSDPEERQVFTSKVTNLFPTKDDLKRSFGAIVRGTGVGAFFGVLPGTTPAIASF
                     SSYMVEKKLAKDQARFGHGAIEGVAGPESANNADAQCKFIPMLTLGIPASGTMALMLG
                     ALMIYGIAPGPQVMTDKPDLFWGLIASMWIGNVMLVVLNLPLIGMWVSLLKLPYRLLF
                     PAIMAFSAIGIYSVN"
BASE COUNT          719 a          959 c         1005 g          771 t
ORIGIN      
        1 gccgccgaga ccaccacgcc gtgctcggtg caggcgtcga tgtcgatatg tcccgtgctg
       61 cgcccggtct ggctgacgag ctggagcctg ggcagacgct cgatcagcgc tcgcggaaat
      121 ggcgagcgtg cctgggtgag gatgacggct tcaacctctt tcaaccgctc ggcaaggcgg
      181 gccggatcct tttccgtgtc ttcatagatt aggacctcgt gtccgtcgag ttttgcatag
      241 cagcgaagca tgcgaaacgc gtcttgatag tcatcgatca cggcgatctt catggatacc
      301 acttaaacgc tgctaagaag aatatacgcc ttgcatgctt cgaccaacac aaattactga
      361 caatctggcg gccattcaac ctgagagaaa acttcttgga gacaacgaag tttgaccgac
      421 ctgagtgcat tggatataga atcgttccgc gggcttcttg gtggtttggc ggcagtaaaa
      481 aaccgttcaa atcgttcgag ctgtcaagcc gtcaaaagac tgaaaactga gcgcaacggt
      541 tgcacggagc gaagcgattg aacagcttga acgtttggaa ccttactgga gaagaaataa
      601 agaggaagtc gaaatggact acaaagtgaa gagtctctct gtaatgatcg tcgttggtgc
      661 ggttgcactg tgctccggga tcgcaacggc gcagggctat ccggcgaagc cggtgcgtct
      721 catcattcct tttccgccag gcggcagcaa tgacatcgtg gggcgcttta tcgctaccaa
      781 attgaccgaa cggctcggca agcaagtcgt cgcggacaac cggggcgggg cgggaggtgt
      841 catcggtact gaggccgcgg caaaatcgga gcccgacggt tacactctgc tcatcatctc
      901 ttccgcatac tcgatcaata cctcactcta caaactgccg tacgatccag tcaaagcttt
      961 caccccgatc gcgaagctcg gaaccggccc gaacgttttc gccgtccatc cgggcgttcc
     1021 ggtcaactca gttaaagagt tcatcgcgct cgccaaggaa aaacccggcc agctcaattt
     1081 cgcggctgca ggcgttggaa gctttcagca tctcggcagc gagcttttca agtcaatgac
     1141 tggggtcgac gttggcatcg tccagttcaa agggggaggg cccgcgatga tcgacgtgat
     1201 cggaggccat acccatgccg cgctcgggtc gctcattcag ttcatgcccc atatcaagtc
     1261 cggcaaggtt aaagcgctag gcaccggcgg tgcgaagcgc agcgtctcct tgcccgatgt
     1321 gccgacgatt gcggaggccg gtgtgcccgg ctacgaagcg aacaactggt ggggtattat
     1381 cacccctgcc ggcacaccgc gccccatagt cgaccggctg tacaaggaaa tctcggcagt
     1441 cctgagttcg gcggaaacac aaaaggtgtt cggggaccaa ggcgcggaag tggatatcat
     1501 gacccccacc gagttcggcc cctacatagt cgccgaaacg gctaaatggg gaaaggtcat
     1561 aaaagaagcg aacatcaaag cggagtagaa gttctgatct tgagaggaag acaactcctt
     1621 caaaaacgca aaggacgcaa aggaaaaaat aattccgagc atggcgtctt ggcgcgagaa
     1681 taatcttagg cgctttgtaa ccagagcaca aagaccgccg gtaaaatata cgcaagtgcc
     1741 gaaaaactgg cggcctaacg gaactctcaa atgaaaatcg agctgcgcag caacaaagat
     1801 ttttgggctg gcatcatgtt gattgccttc ggcgccgcgt cgatcatcat tgcccgtggt
     1861 taccccttcg gcagcacgat gcggatggga cccggttact ttccgagcat gctcggcggg
     1921 atcgtcgccc tgttcggcct ttatatcatg attatcggac tgcgcagagg cgagaagatg
     1981 acggttcact gctcgacttg ggctttgatc gtgttgccct tttctctgat cgccttcggg
     2041 gttttgatga cacatgcggg cttcatacca gcgatggcgg tgctcatctt cgggtcggca
     2101 tccgcgggac gagatttcaa gttcggcgaa gttttgctgc ttaccgctat cctgaccggg
     2161 ctctcggtcg ccatattcat cgtaggtctc gggctgccgt acccattgat caaaggattc
     2221 tgacaccatc gccatggaac tttttaacca tctgatcttt ggcttcagcg tggcactctc
     2281 gctgcagaac ttggtctact gcttcatcgg cgtcctggtg ggcacgttaa tcggcgtgct
     2341 gccgggcatc gggccgttgg cgaccatcgc gatgctgtta ccgctcacct tcaacgtgcc
     2401 gccggttgcg gcgatgatca tgctcgccgg catttactac ggcgccatgt acggcggctc
     2461 gacgacttcg atcctggtca acctcccagg tgagacggcc gccgtgatca cgtgcatcga
     2521 cggttatcag atggcgcggc aggggcgcgc cggagcggct cttgcgatcg cggccatcgg
     2581 ctcgtttttc gctggtaccg tgtgcacctt gttaattgcg ctgttcgccc caccccttgg
     2641 cgagtttgcg ctgaagttca gctctgcgga atatttctcg ctgatgctga tgggtctggt
     2701 cgcggcagcg gtgctctctc acggtaacat ggtgaagtct cttgctatgg ttgtggtggg
     2761 gttgttgctc ggtatcgttg gcgctgacgt caattcaggg atcaaacgct tcaccttcgg
     2821 tttctacgaa ctggcggacg gcatcggtgt cgtgacgatc gccgtcggtg tttttgcggt
     2881 gggcgaaatc ttgtgcaact tgagcgaccc tgaagagcgc caggttttca cgtccaaagt
     2941 gacgaacctc tttccgacga aagacgatct gaaacggtct ttcggcgcga ttgtcagagg
     3001 aaccggagtc ggcgcgttct tcggcgtatt gccaggcacg acaccggcga tcgcctcatt
     3061 ctcgtcctat atggtggaga aaaagctggc caaagaccag gcgcgtttcg gccacggcgc
     3121 catcgagggc gtggccggac ccgagtccgc caacaacgcg gacgcgcagt gcaagtttat
     3181 cccgatgctc accttgggaa ttcctgcaag cgggacgatg gcgctcatgc tcggcgcgct
     3241 gatgatttac ggcattgctc ccgggccgca ggtgatgacc gacaagcccg atctcttctg
     3301 gggcttgatc gctagcatgt ggatcggcaa cgtaatgctg gtcgtgctca acctgccgct
     3361 tatcggcatg tgggtgagcc tgctcaagct gccctaccgc ctgcttttcc ccgctattat
     3421 ggcgttctcc gccatcggca tctacagcgt gaac
//
LOCUS       DATDHO010000413         6048 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_316948, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000413 DATDHO010000000
VERSION     DATDHO010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6048)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6048)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6048
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316948"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..243
                     /locus_tag="VIY07_07985"
     CDS             <1..243
                     /locus_tag="VIY07_07985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381731.1"
                     /translation="AMRKLLASAVILAILSSPAFAQLQPKKEDDPLVILEKEKQKQAE
                     ALDKQYKRMMDRSRKDAETPKSDPWSNMRTPNDSKR"
     gene            complement(305..748)
                     /locus_tag="VIY07_07990"
     CDS             complement(305..748)
                     /locus_tag="VIY07_07990"
                     /inference="COORDINATES: protein motif:HMM:NF019844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEY6381732.1"
                     /translation="MKLAYIVGLSIACLATAALAKPAYVGSTLNLRAAPGTGSEIVAK
                     IPGGSLVDAGGCDEGWCEISWQDKKGFAIQSGLDMTGRVPQPRAAAVVAPAQRPPAQA
                     PQARQVLEGPEEIVEGPVYYRAPPPVVYYGGPYYRPYWGWRRHWW"
     gene            complement(900..1666)
                     /locus_tag="VIY07_07995"
                     /pseudo
     CDS             complement(900..1666)
                     /locus_tag="VIY07_07995"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
     gene            complement(1734..3050)
                     /locus_tag="VIY07_08000"
     CDS             complement(1734..3050)
                     /locus_tag="VIY07_08000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381733.1"
                     /translation="MNFLERWLGRIMPATPQERAAALWSFAYFFALLAGYYVLRPLRD
                     QMGIAGGVKNLPWLFTATFVTLLVAQPLYGALVARLPRARFVPIIYHFFVANLVLFWV
                     LLTLEIENAVVARVFFVWVSVFNLFAVAVFWSFMADLFTSEQGKRLFGFIGAGGTAGA
                     LLGPAITIWLSVPLGPVNLMIAAAVFLELAVFCIYRLERAAGVHAGPKATTDSIGGSA
                     FAAIPELIRSPYMLGIGIWVALLSYCATILYFEQAHIVSEAVKSAGQQTRVFASIDLA
                     VSILTLITQLLVTGQLLKRVGVGVGAAVLPAVYIVGFSVLAVMPTLIVVMTVQVVQRW
                     MNFAIANPARHLLFTVVTREEKYKAKNLVDVVIYRGSDALSGWIFDSLQALGLKLGAI
                     ALCSLPVAAGWLVLSLALGRAQEKRSAQSRSTPATETGREYRLDPA"
     gene            complement(3047..3787)
                     /locus_tag="VIY07_08005"
     CDS             complement(3047..3787)
                     /locus_tag="VIY07_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent F420 reductase"
                     /protein_id="HEY6381734.1"
                     /translation="MRKQNFIQVDRRALLGAGGVLMLGTILQPAPARAQGNSRSRIGV
                     IGSGNIGGTIGGLWVKSGHPVLFSSRHPEELKGMVAKLGSLAQAGTVEQAVAFGEVLF
                     IAVPYGAIPQVGRDYSVAMKGKVMLDACNAVSARDGAIAEEVEQNGIGITTQKYFPGV
                     HVVRAFNTMSYAVFAREANRPDPKLAIPIAGDDPKAVQVAAALVRDAGFDPVPVGTLA
                     DARRFQRGQPGYGQQVTAAELKQKLSLP"
     gene            complement(3926..4666)
                     /locus_tag="VIY07_08010"
                     /pseudo
     CDS             complement(3926..4666)
                     /locus_tag="VIY07_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323483.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YiiX/YebB-like N1pC/P60 family cysteine
                     hydrolase"
     gene            complement(4798..>6048)
                     /locus_tag="VIY07_08015"
     CDS             complement(4798..>6048)
                     /locus_tag="VIY07_08015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HEY6381735.1"
                     /translation="TLREVARTYARAESAIIFWGMGVSQHTHGTDNARCLIALSLITG
                     QIGRPGTGLHPLRGQNNVQGASDAGLIPMFFPDYKSVESSEIRAKVENVWNAKLDPKK
                     GLTVVEIMDAVHADVIKGMYILGENPAMSDPDLNHAREALAHLEHLVVQDLFLTETAV
                     YADVFLPASAWPEKDGTVTNTNRQVQMGRQALPLPGDAKSDWWITQEIARRIGLDWNY
                     KHPGEIYTEMASLMPSLDNIPWERVERESAVTYPADAIDKPGRDVVFDKGFPRPGGFG
                     KLVAAKLQPPDETPDHEYPFILTTGRQLEHWHTGAMTRRATVLDALEPAAVASLSRGT
                     FAKLGIKPGDMVRVTTRRGEVELNSRQDDGIPDGVVFIPFAFVEAAANILTNPALDPF
                     GKIPEFKFCAAKVEPAEVRRVAAE"
BASE COUNT         1296 a         1853 c         1769 g         1130 t
ORIGIN      
        1 gccatgagaa agcttctcgc cagtgccgtc atattggcca ttctgagttc gcctgctttc
       61 gcgcagctgc agccgaagaa agaagacgac ccccttgtga tcttggaaaa agaaaagcag
      121 aagcaggcgg aggcgctcga caaacagtac aaacggatga tggaccgctc gcgtaaagat
      181 gcagagacgc caaaaagcga cccgtggtcg aacatgcgta cgccgaacga cagcaaacgc
      241 taacccttcg tctttagggc gtcacgcgct tgctgctcga attgaaacgg cagcggagca
      301 ataatcacca ccaatgccgg cgccagcccc agtaagggcg atagtacgga ccgccatagt
      361 aaaccaccgg cgggggagcg cggtaataca ccggcccttc gacaatttct tcgggtccct
      421 ccagcacttg ccgcgcctgt ggagcttgcg ctggtggccg ttgcgccgga gccacgactg
      481 cggcagctcg cggttgcggc acgcgcccgg tcatgtcgag cccggattga atcgcgaagc
      541 ccttcttgtc ctgccaactg atctcgcacc agccctcgtc acatccgccg gcgtcgacca
      601 ggctgccgcc cggaatcttt gcaacgatct cactgccggt gccgggcgct gcgcgcagat
      661 ttagcgtcga gccgacatag gccggtttcg ccagtgccgc tgtcgccaag cacgcgattg
      721 atagacccac aatatatgcg agtttcatgg cttgctcccg tcccactcgc cttccactgc
      781 ggtgaaaggc gggagacttt ccgccccgaa aacggcggga tcgcggcgac ccagatcctg
      841 agaggaactg tgcgcgcctg tgcggcaatc cattgaggct cttggcgaat tgaggcgtgc
      901 tacagagcct tgatgaaaga aaccatttgc gcacgctcct ttgcgtccgg cagcggtccg
      961 cgcatcgcac ccagattgtc gatcatatgc ttcgcatccc cggttcccgg aatcacagcc
     1021 gtcactcttg tgtcggccag cagatacttc aggaagaact gtgcccaact gccggcaaat
     1081 ccgctcgccc agtcaggaat cttctgaccg cgcactgcgc gaaacagtcg gccattgcca
     1141 aatgggatcg ccgtcaatac gcctgctttc acttcggctg ccagggggag aatgcgtttc
     1201 tcggcttcgc gaacatcgag cgaatagtcg atctgcacga aatccggttt ttcccgacga
     1261 agcactgcct cgacggccgg aaagtctcgg tgaaacgtcg atgtcacgcc gatgtagcgg
     1321 catatgcctt gcgatctcca ttttgccagt gcagctggag aaggtcgacc tttgcggtct
     1381 tcagtcggtt cagcgacctc ttgagttcgg agggatcggg actctcgagc ttggtggcga
     1441 taaaaatctt gtcacgcaga cctgagcccg cgatttcggc gcccatgacg atttctgcat
     1501 cgccatatgt tgacgcggta tcgataactc gaccgccgtt cgcgaccaaa gcctgcacca
     1561 ctgctgcggc tttggcgcgc gttgcttcgt tggcgttgtc gaaaatcctg gcggtgccaa
     1621 ggccaacagc cgggacaagc tcgccgctgc tcggaatggc gcgcatgagg agcgaatccg
     1681 tctgcgccag agccgggcgc gccaacagac ttgcgcctgc aaatgcagcg aattcacgcc
     1741 gggtcaagac ggtattcacg accagtctcc gtagcaggtg tcgaacggga ttgggcggaa
     1801 cgcttttcct gtgcacggcc cagagccagc gaaagcacca accagcccgc tgccaccggc
     1861 agcgaacaca gggctatcgc gccaagcttc agccccaacg cctgcaggct gtcgaatatc
     1921 cagcctgata acgcatcgga accgcgatag atgacaacgt cgacgagatt cttcgcttta
     1981 tatttttcct ctcgcgtcac cacggtgaac agcaaatggc gggcgggatt cgcaattgcg
     2041 aagttcatcc accgctgaac gacctggacc gtcatcacga caatcagcgt cggcatgacg
     2101 gcaagaacag aaaatccgac aatatagacg gccggcaaga ccgccgctcc tacacctacg
     2161 ccgacccgtt tgagcaattg ccccgtaacc agcagctgcg tgatcaacgt caatatgctg
     2221 accgcaagat cgatgctggc aaagacgcgc gtttgctgac cagcggactt gaccgcctcg
     2281 gaaacaatgt gggcctgctc gaagtaaagg atggtcgcac aataggacag tagcgcgacc
     2341 cagattccga tgcccagcat gtacggtgaa cggatcagtt cggggatcgc tgcaaatgcg
     2401 ctgccgccga tactgtccgt tgtcgccttc ggcccggcgt gtacccctgc tgcgcgttcg
     2461 aggcgataaa tgcagaacac cgccaattcg aggaaaaccg ccgcagcgat catcaggttt
     2521 accggtccca atgggaccga cagccagatc gtgatggccg gccccagcaa tgcgcccgcc
     2581 gtgccacccg cgccgataaa tccgaacagt cgcttgccct gctcggacgt gaagaggtcc
     2641 gccatgaacg accagaaaac cgccacagcg aacagattga acacgctcac ccaaacgaaa
     2701 aacacgcgcg caacgacggc gttctcgatc tctagggtca gcaggaccca gaacaatacg
     2761 agattggcaa cgaagaagtg atagataatc gggacaaagc gcgcgcgggg cagccgcgcg
     2821 accaacgcgc cgtacagcgg ctgtgccacg agcagcgtga cgaaagtggc ggtgaacagc
     2881 cagggcagat ttttcacccc gccggcgatt cccatctgat cgcgcaaggg ccgcaacacg
     2941 tagtaaccgg ctagcaatgc aaagaaatat gcgaacgacc acagggcggc cgcgcgctcc
     3001 tgcggcgtcg ccggcatgat gcgccccagc cagcgttcaa ggaaattcat ggcagtgaca
     3061 gcttctgctt cagctccgcg gcggtcactt gctgtccgta cccgggttga ccgcgttgaa
     3121 agcgccgcgc gtcggcaagc gtgccgaccg gcaccggatc gaacccggca tcgcgcacaa
     3181 gagccgccgc aacctgcacg gccttcggat catcaccggc gatcgggatg gcaagcttcg
     3241 ggtccggacg gttcgcctcg cgcgcaaaga ctgcgtacga catcgtgttg aatgcgcgta
     3301 ccacatgaac gcctggaaaa tatttctgcg tggtgatgcc gataccgttt tgctcgactt
     3361 cctcggcaat ggcgccatcg cgcgccgaca ccgcgttgca ggcgtcgagc atgactttgc
     3421 ctttcatcgc gacggagtag tctctgccga cctgcggaat cgccccgtaa ggcaccgcga
     3481 tgaaaaggac ttcgccaaat gcaacggcct gctcgaccgt gcctgcctgt gcaaggctgc
     3541 cgagctttgc caccatgccc ttcaattcct cggggtgacg cgaggaaaac agcaccgggt
     3601 ggccactctt gacccacaac cccccgatcg tgccgccaat attgcctgaa ccaatgacgc
     3661 cgatacgcga gcgcgaatta ccttgggccc tcgcaggcgc cggctgcaaa atcgtcccca
     3721 gcatcaggac gccaccggca cccagcagtg cgcggcggtc aacttgaata aaattctgtt
     3781 tgcgcatcga ttagctccaa cacaaccgtc gttcgcatct ttgcaacgga aagtgccgga
     3841 atcttctcac ggttgcgtga ggtcgatggc tattggcgcg aggcaggaac tcgccgataa
     3901 aatttcacat tccggcagct gagtctttcg tcgaccaatt gatggtcttg taattgaaac
     3961 ccatttcgat tgtcggcttg atcaccccga aatacggcga aatatcgaag tcgcgcggac
     4021 aataaagtga gctgtcgcga atgtgataga tctcgcgccg cgcctttgca ctttcgactc
     4081 gctcgattgc cggcaaaatc gggtagccga tcctcgcgaa agcctgcgcg ataagcgccg
     4141 aacatataag cttggtggga tcgccggagc caagcgcgat catgcggcgg cggaagcgtt
     4201 gcggtaccgg cagcggcacc agatagcggc caagatcgac aatgttcttg agatcatatt
     4261 gcagtccgat gcgttcgacc gcgtagtcac agacagcctg gcggtcttca ggcgagagcc
     4321 caaccgggcg gcagatgcgg gtgtggtatt cgaaataggt ggacagtgga acgcagatga
     4381 tgcccgcttc aatgttggat tccacaaggt cgcaaggctc gccgcttgac gtcgcctgac
     4441 cctcgaccgg accgacatat agcgcggcat gcgaccaggt ggactgggtc agatacttga
     4501 tcacgccggc aatgtgggtg cgaccttcga tcaagaggat gtcgccgggc ttgatgagag
     4561 ctttcaatgc cgccggatcg gttggcgtga acggctcgta tccggtggca ggcttttgca
     4621 gataggcggc aatatgccgc ccgacgcgat ccagcatcca tgtcatgggc gaaaatcccc
     4681 agccagcaac accgtcagga taacaacacc gtcatcgttc gcgaaaccgg acgatggcaa
     4741 tcgttggatg acccatgacg gaccggagtt cccgacttgc cggaacgacc tgcgatgcta
     4801 ttccgctgca actcgccgca cttccgcggg ctcgaccttg gccgcgcaga acttgaattc
     4861 cggaatcttg ccgaacggat cgagcgccgg gttggtcagg atatttgccg cagcttccac
     4921 aaaggcaaac ggaatgaata cgacgccgtc agggatgcca tcgtcctgac gcgaattgag
     4981 ctcgacctcg ccgcgtcgcg ttgtgacacg caccatgtcg cccggcttga taccgagctt
     5041 ggcaaaggtg ccgcgcgaga gcgaagcaac cgccgccggc tccagtgcat caaggacggt
     5101 ggcgcgacgt gtcattgcac cggtgtgcca atgctcgagc tgacgcccgg tggtcaggat
     5161 gaatggatac tcgtgatcgg gcgtttcgtc cggcggttgc agctttgccg ccaccagctt
     5221 gccgaagccg ccgggccgcg ggaagccctt gtcgaagacc acgtcacgcc caggcttgtc
     5281 gatcgcgtcg gcgggataag tcacggcgct ttcgcgctcg acacgctccc acggaatatt
     5341 gtcgagagaa ggcatcaacg acgccatctc ggtataaatc tcaccggggt gcttataatt
     5401 ccagtctagc ccgatccgtc gtgcgatttc ctgggtgatc caccagtcag acttggcatc
     5461 gccgggcagc ggcagggcct gacggcccat ctgcacctga cggttggtat tggtgacggt
     5521 gccgtccttt tcaggccatg cggatgccgg caggaacacg tcggcataga cggctgtctc
     5581 ggtcaggaac agatcctgca ccaccaggtg ctcgaggtgc gcgagcgcct cgcgcgcgtg
     5641 attcagatca gggtccgaca tcgcgggatt ttcgccgagg atgtacatgc ctttgatcac
     5701 gtcggcatgg acagcatcca tgatctcgac gacggtgaga cctttcttgg gatcgagctt
     5761 cgcgttccat acgttttcga ctttggcgcg gatctcggaa ctctcaactg atttgtaatc
     5821 cgggaagaac atcgggatca ggccggcatc ggaggcgccc tgcacgttgt tctgcccgcg
     5881 caatggatgc aggccggtgc ccgggcggcc gatctggccg gtaatcagcg aaagcgcaat
     5941 caggcagcgc gcattgtcgg tgccatgcgt atgctgcgag acgcccatgc cccagaaaat
     6001 gatggcgctc tcagcgcgcg cgtaagtgcg cgccacttcg cgcaaggt
//
LOCUS       DATDHO010000414        18081 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_19895, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000414 DATDHO010000000
VERSION     DATDHO010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 18081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18081
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19895"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..3170
                     /locus_tag="VIY07_08020"
     CDS             90..3170
                     /locus_tag="VIY07_08020"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381736.1"
                     /translation="MKFDFSWSVKGVRPDARKMAEEAARRAGLSLSDWLNAIILQQAA
                     TQGIKAPPTRYDVEETDNPPDLHPRSDDPPRRIEQVTQGGFAAYAPRRDRDEADRLAE
                     LSARLEQRFDELADIAGRRYSHKHEPAPHRTQDLTNLETKLRKITDQIEALRRPGVEE
                     EIAALRSEIHEIGRALDQAMPQRAIEAIEKQIQDLADRIVEGQDADTNGRALEGIEYG
                     LAEVRDALSGLTSLQNHPEYAEAIDVLAQKIDLIAAQQGPATTHQLETLMETLHDMAV
                     QVASNDTINGLSAQVRALTDKIEHLAVAGSAGDAFNRLELRIDALSRSVSENLPDGAP
                     LARVEDLLESLCEKIDDLGQARVERIALDHLENLIAKLVDRLDATESRLGHLDAIERG
                     LTDLLVHIEGIRTSKQTATVRADQDGNLSQQDIVRTQTALEALIASLDRVSDRVATIE
                     KDLRKDPAKEAIGETGILELTQIAAIATKGNIETSPQVPPAIELPTPLASSALDHDRG
                     APVSFARTESFSKSAHPVQSPAAGADLRADEPLEPGLGRRRISPRPGSRIAASEAALG
                     IARPGAVASGSKSSFIMAARRAAQAASQDPKNRPRPELHKVGGEKITLRGEIARRGKG
                     MLLAASIVAIVIGSIQLTSNIFDFRMFESQDAKLANTFATDVNSDSAVQNAENETTAS
                     IAVEKTDTSKLPEGDGTADLLAAPALPSLTPARPTTKPDPAAPLSLNTFDSSSDGRVP
                     VPNPPLLNPPALGAPTPKNEATATIARNATETRPNRQSAPAAQPSATDGLPPAIGAAR
                     LRNAASAGDPAAAYEIAMRYLEGRGVPANLEEAARWFERAASKGLVPAQFRYASMLEK
                     GQGVKKDLPAAQKLYAVAAGKGHAKAMHNLAVIYADGIEGKPDYASAALWFRKAAEHG
                     IADSQYNFAILAARGLGTEKNLPEAYKWFALAAAQGDRDAGRKRDDVAAHMDPQALAA
                     AQEAVKGFAVQTQPATATVVPEPPGGWDRMSSPSQDRPRAAGPLSISSFNPGKL"
     gene            3372..4295
                     /locus_tag="VIY07_08025"
     CDS             3372..4295
                     /locus_tag="VIY07_08025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY6381737.1"
                     /translation="MQIYLPIADLPVNVFLVLGMGLAVGYISGMFGIGGGFLMTPLLI
                     FIGITPAVAVATVSSHIAASSFTGAISYWRKRALDIALALMLLSAGIVGTAIGVWLFT
                     ELRALDQLDLMIGLSYVTLLTVVGATMIYESWRAIMRTRHGMPATLRRPGSHTWFHGL
                     PFKLRFKRSKIYVSAIPVWAIGLVIGFLGAIMGIGGGFLLVPMLIYLLRVPTATVIGT
                     SMVLTLVTMASATVMHAATNHLVDAVLALILMVGGVIGAQFGARTGQKMRGERLRLLL
                     GLLVFAVGCRFAYELVVKPDDLYSLRYVRSE"
     gene            4292..5071
                     /locus_tag="VIY07_08030"
     CDS             4292..5071
                     /locus_tag="VIY07_08030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02186 family protein"
                     /protein_id="HEY6381738.1"
                     /translation="MMRRFAQILALALLVFGAEPAAAERLVVSLSNHRVAVTSNFVGE
                     ELVLFGTIEPEPPARALRPPYDLVVTVTGPRQTIRTRRKQRILGIWVNADSREFVRVP
                     AYLAVLSSRPVNDIASPDTLRRLQLGLDNFLLPQRIGSDFADTVRDDPFRRAFVRLQT
                     QQGLYRESATAVTFLTPTVFRAAVPMPAAVPTGSYGIEVELFTGGALVARTNSALDVI
                     KTGFEQYVADAARDYGLLYGTATALMALLIGWFASIVFARD"
     gene            complement(5068..5775)
                     /gene="pdeM"
                     /locus_tag="VIY07_08035"
     CDS             complement(5068..5775)
                     /gene="pdeM"
                     /locus_tag="VIY07_08035"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     endonuclease PdeM"
                     /protein_id="HEY6381739.1"
                     /translation="MSQAARNQAESEGNLIVLAGVPLLADPRGALYWHEHGLLVVADL
                     HLEKGSSFAARGQLLPPYDTATTLARVSHLAADYAPRCIVALGDSFHDVGGPGRLSEN
                     DRATLQALQRGRDWIWITGNHDPEPADGIGGIFQETLTIGVLTFRHEPNGAAGEISGH
                     LHPVARIAHRGRAVSRRCFAADRTRLVMPAFGAFTGGLNIRDAAFADLFGTLAFTAYL
                     LGDARVYSFTANRCLPD"
     gene            complement(5772..8315)
                     /locus_tag="VIY07_08040"
     CDS             complement(5772..8315)
                     /locus_tag="VIY07_08040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response DEXH box
                     helicase"
                     /protein_id="HEY6381740.1"
                     /translation="MEPARDLFDTRVRLPDIFERWFAARGWQPRAHQLELLSRVRAGR
                     STLLIAPTGGGKTLAGFLPTLVELNERGLRSRNLKSAGRTVVRSQGLHTLYVSPLKAL
                     AVDIARNLEIPVREMGLPVRLETRTGDTPVFKRQRQRRDPPDILLTTPEQLALLLASA
                     DAPFMFGTLKRVVLDELHSLVTSKRGDLLSLGLARLFALAPGLTTIGLSATVAEPDEL
                     CRFLVRQPLQGEARADLVVAEAGAQPIVAMLDTREHLPWAGHSARHALGEIYTHIKTH
                     KTTLVFVNTRSQAEFLFQELWRANDDNLAIALHHGSLDVAQRRRVEDAMAAGKLRAVV
                     CTSSLDLGVDWGDVDLVINVGAPKGCSRLLQRIGRSNHRLDEPSEAVLVPANRFEVLE
                     CRVAIDAVAENAQDTPPLRTGALDVLAQHVLGRACGEPFLADELYAEVRAAAPYSLLT
                     RADFDAVVDFVATGGYALKAYERFAKIRQGKDGRWRITHPRVAQRYRMNVGTIVEADM
                     IKVRLVRSRRSGKVVPRGGRLLGEVEEYFIETLKVGDTFVFAGEILRYEALVEDEVYV
                     SRSDATDPKVPAYEGGKFPLSTYLAARVRALLAKPAAWRALPEQVREWLEIQQWRSVL
                     PKAGDLLVETFPRAAKYYLVCYPFEGRLAHQTLGMLLTRRLERARLRPLGFVANEYAL
                     AVWGLGDVALRIARGDLSLAQLFDEDMLGDDLEAWLAETALMKRTFRNCAIIAGLIEK
                     RFPGEEKSRRQLTISTDLVYDVLRKHQPDHVLLRAARADAATGLLDIQRLGEMLSRVR
                     GRIVHKALDHVSPLSVPVLLEIGRETVYGECSDTLLAEAADQLIKEAMS"
     gene            complement(8318..9238)
                     /locus_tag="VIY07_08045"
     CDS             complement(8318..9238)
                     /locus_tag="VIY07_08045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY6381741.1"
                     /translation="MDPIFLSSGDVVADRRFEWARDRQSKGDLTGAADLMMQAIELVP
                     AYAPAWFVLGELREKLGDRSGAIAAFEQALIADPGDRQGAALRLVRLGGGSGRARTEG
                     YLRALFDGYAPEFDHALTSGLNYRAPELLFRAIETAHADARMRFGSVLDLGCGTGLAA
                     LPLRPFSDWMVGVDLSRGMLGQARAKGLFDRLVESEILAFLAGETEIGARYHLVIAAD
                     VFTYFDDLEPLLAAVAQVSAPGGHFAFSVETHEGDGITLRETLRYAHGKAHVEASLAA
                     AGLKLISIDCASTRTEKGSPVPGLIVVAGS"
     gene            9402..10433
                     /locus_tag="VIY07_08050"
     CDS             9402..10433
                     /locus_tag="VIY07_08050"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HEY6381742.1"
                     /translation="MRPEDILVPTPSGVCCRPGGFHIDPTRPVEKALITHGHSDHARA
                     GHGAVLATQETLDLMRIRYGDNFAGTTQAISYGETLKLDGARVSFHPAGHVLGSAQIR
                     VECNGLRVVASGDYKDVPDPTCTPFEPLRCDVFITEATFGLPVFRHHDAAGEIAKLLQ
                     SVRLFPERAHLVGAYTLGKAQRVMAMLRTAGYDKPIFIHGAIESTTRYYHDRGIDLGQ
                     VELARDVNKAELAGRIIICPPSALGDLWSRRFPDPVAAFASGWMRVRARARQRGVTLP
                     LVISDHADWDGLTAAIAATGASEVWVTHGQEDALVHWCKTNGLKARPLDIVGYGDEED
                     NEPGSEAEA"
     gene            10430..12139
                     /locus_tag="VIY07_08055"
     CDS             10430..12139
                     /locus_tag="VIY07_08055"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cisplatin damage response ATP-dependent DNA
                     ligase"
                     /protein_id="HEY6381743.1"
                     /translation="MNRFAELLDRLAYEPARNAKLRLISDYLRGTPDPERGWALAALT
                     GALIFKHAKPGMIRGLIAERTDPVLFALSHDYVGDLSETVALMWPAQERPVPLPPRNG
                     GEGGEKKTPTLSEVVETLSTLGKSQLPAQIARWLDGLDETGRWALLKLVTGGLRIGVS
                     ARLAKTAAASIGDKSVDEIEILWPGLAPPYLDLFAWLEGRADKPSARDPAPFRPPMLA
                     HAAEEPDLAALASTDFMAEWKWDGIRVQAVAGSADHGGLLARLYSRTGEEISKSFPDL
                     LEALCLPCAIDGELLIMRDRRVQSFNVLQQRLNRKAVTPKLLAEFPAHLRAYDLLAEA
                     DQDLRDRPFAERRDRLEKLVAKLDDPRIDVSALIPFQTWDDLAAARADPASAGAGRDA
                     DAVEGVMLKRRDAPYVPGRPKGPWWKWKRDPMLIDAVLMYAQRGHGKRSSYYSDYTFG
                     VWNRGDNGEELVPVGKAYFGFTDEELIQIDRFVRRNTIDRFGPVREVAHEPHRGLVLE
                     VAFEGLQRSTRHKSGIAMRFPRINRLRWDKPPGEADRLETLQNMLARRERATVAANGG
                     THG"
     gene            12132..12407
                     /locus_tag="VIY07_08060"
     CDS             12132..12407
                     /locus_tag="VIY07_08060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6460 domain-containing protein"
                     /protein_id="HEY6381744.1"
                     /translation="MADNHVARWAGGSPLGVLMRLVLVSILVGVILSALGLDPFDIFH
                     SIERLIRSIWNMGFDAVRWVWRYFLLGAVIVIPIWIIMRLVNAPRGR"
     gene            complement(12420..13514)
                     /locus_tag="VIY07_08065"
     CDS             complement(12420..13514)
                     /locus_tag="VIY07_08065"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEY6381745.1"
                     /translation="MIGLFDRLSRPFLRALDPEDAHRLAIKALRFMPLAKAAADSEEL
                     AVLAFGLKFPNPLGLAAGFDKNAEAVDGLLRLGFGFVEVGTITPRPQAGNPRPRILRL
                     VSDQAVINRLGFNNEGAAAVHIRLAARRNAGGIVGVNIGANRDSTDRVEDYARLIETF
                     SAVASYFTVNVSSPNTPGLRDLQQAKVLDDLLARVIEARERVRTRAGPKPVLLKIAPD
                     LTLPELDDVVGVARKRRVDGMIVGNTTISRPGSLRERDMAREQGGLSGRPLFRLATRM
                     LAETYVRTEGAFPLVGVGGIDSGSTAIAKIKAGATLLQLYTALVYRGVGVVTEIKEDL
                     AAALRRGHRNSLASMVGSDAATITAESWPA"
     gene            13676..14305
                     /locus_tag="VIY07_08070"
     CDS             13676..14305
                     /locus_tag="VIY07_08070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY6381746.1"
                     /translation="MLTHNQIWTAIDRLAARAKLTPSGLARKAGLDPTTFNKSKRVTP
                     EGRPRWPSTESVAKALQATSTKFDTFVTLITDGGKAAMHNVPLIGLAQAGAGGFFDDG
                     GFPVGKGWEDIAFPAVSDEHAYALEISGDSMKPAYRNGDVIIVSPGATVRKGDRVVVK
                     TKDGEVMVKELKRKTAKSVELKSLNAEHRDRTLPMSEVLWLARIVWASQ"
     gene            complement(14339..15970)
                     /locus_tag="VIY07_08075"
     CDS             complement(14339..15970)
                     /locus_tag="VIY07_08075"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEY6381747.1"
                     /translation="MSIAETAASLRQLAEQSNAWPFEEARKIVVRLKKRPKDEVIFET
                     GYGPSGLPHIGTFGEVARTTMVRHAFRVLTDDKVKTRLIAFSDDMDGLRKVPDNVPNK
                     DMLEAHLGKPLTQVPDPFGTHPSFGEHNNARLRAFLDHFGFEYEFLSSTECYKSGRFD
                     QALLKVLARFDQVMAIMLPSLREERAASYSPFLPVSPESGIVLQVPVTAHDAKAGTIT
                     YQDPDTAEQVVTPVTGGRCKLQWKPDWAMRWLALGVDYEMAGKDLIDSVKLSGEICRA
                     LGGMPPEGFNYELFLDEKGQKISKSKGNGLTIEEWLRYASPESLSLFMYREPKAAKRL
                     YFDVIPRNVDEYYQFLDGFERQDPRQQLSNPVWHIHSGKPPKIDMPISFTMLLTLVSS
                     SNAENAETLWGFIGRYRPGVTPKTHPKLNELVEYAIHYFRDFVLPTKTFREPTDPERA
                     ALIDLRDALSQLQAKATAEEIQNVVYEVGRREPFLDHKKKAKDGKPGVSLDWFNLLYQ
                     VLLGQEKGPRFGSFVAVYGLQNTIDMIDGALARSA"
     gene            complement(16028..16900)
                     /locus_tag="VIY07_08080"
     CDS             complement(16028..16900)
                     /locus_tag="VIY07_08080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY6381748.1"
                     /translation="MAVAVTLPVFAAAAAHAQTTKGPSSAPSAPAAKTVDSMAVPSFW
                     DPRRRPERPDLSRISIIRFLTETDYPPFNYAGPDGAPTGFNVDLARLICEELKVACTV
                     QMRRFDTLIGALNSNNGDAIIASIAATPEMRTRLDFSDPYYRTPARFVARRDSTIEDV
                     RPEVLEGKKIAVVAGTAHEAYLKALFTEAELRPYPDSDAARFALKRGEVDLLFGDGVS
                     LAFWLNGTDSANCCVFRGGPYLESRFFGEGVGIAVRRGNDLLRQAFNWALFRLWEKGR
                     FTDLWLRYFPVSPF"
     gene            complement(17035..17484)
                     /locus_tag="VIY07_08085"
     CDS             complement(17035..17484)
                     /locus_tag="VIY07_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host attachment protein"
                     /protein_id="HEY6381749.1"
                     /translation="MAALLIRHGEWVVVCDGAKALILQNSGDIKFPNLKTIQVFEHKD
                     LATHELGTDAPGRAVNSVGNMRSAVDQTDWHDQSERTFLTQLVQHLDAAITSGKVKSL
                     IVVAPPRALGVIRPAYTHALKSAVRAEVDKDFVKMPVHEIEKHLTGD"
     gene            complement(17577..>18081)
                     /locus_tag="VIY07_08090"
     CDS             complement(17577..>18081)
                     /locus_tag="VIY07_08090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6381750.1"
                     /translation="FEVKAENLLGGVEGLGFKQLMQTFESARIQTAARAIGVAQAAME
                     QALGYAQNRVQFGAPIVGFPRVADKIVMMAVEIMIARQLTYHAAREKDSGRRCDLEAG
                     MAKLLAARIAWAAADNAVQVHGGNGFALEFPVSRILCDARILNIFEGAAEIQAQVIAR
                     RLLDGTN"
BASE COUNT         3631 a         5571 c         5440 g         3439 t
ORIGIN      
        1 agccccgtat ccacacggcg ttcccgcgcc ggattccacg agagtcgagc ccggctcttg
       61 gcgtctccac ctcggatgtg ggtgtgggca tgaaatttga cttttcgtgg agcgtcaaag
      121 gcgttcggcc ggacgcgcgc aagatggcgg aagaagcggc gcggcgggcc ggcttatcgc
      181 tgagcgactg gctcaacgca atcatcctgc aacaagctgc aacacaaggc ataaaggcac
      241 ctcccacccg gtatgacgtg gaagaaaccg ataatccgcc tgatttgcac ccgcggagcg
      301 atgatccacc ccgtcggatc gaacaggtaa cgcagggcgg cttcgcggct tacgctccca
      361 ggcgggatcg cgatgaagcc gaccggttgg ccgagctttc tgcgcgactt gaacaacgct
      421 tcgatgagct cgccgacatt gcggggcggc gatattcgca caagcacgaa ccggcgcccc
      481 accgaactca ggacctcacc aaccttgaga ccaagctgcg caaaattaca gaccagatcg
      541 aagcgctgcg gcgccccggc gtagaagaag agatcgcggc cctccgttcg gaaattcatg
      601 aaattggccg cgcccttgac caggcaatgc cgcagcgagc cattgaagcc attgaaaagc
      661 agattcaaga tttggccgac cgtatcgtgg aaggacagga cgccgatacc aatggccgtg
      721 ccctcgaggg catcgagtac gggcttgccg aagtgcgcga tgcgctgtcc ggactgacgt
      781 cgttgcaaaa tcatcccgaa tatgcggagg caatcgacgt tctggcgcag aaaatcgatc
      841 tcatcgctgc gcagcagggt cccgcgacca cgcatcagct cgagacactg atggaaacat
      901 tgcacgacat ggcggtgcag gtcgcttcca atgataccat caacggcctt tccgcgcagg
      961 tgcgggccct gaccgataag attgagcatc ttgcggtagc gggaagcgca ggcgatgcct
     1021 tcaaccggct cgaacttcgc atcgatgcgc tcagccgctc ggtttccgaa aatctccccg
     1081 atggcgcccc actcgcgcgc gtggaggact tgctggagtc cttgtgcgag aaaatcgacg
     1141 atttagggca ggcccgggta gagcggatcg ccttggacca tctcgagaat ctcatcgcca
     1201 aactcgtaga tcgactcgat gccaccgaat cccgcttggg acacctggat gcaatcgaac
     1261 gcggattgac agacctgctg gtgcatatcg aaggcatacg aacgagcaaa cagacagcaa
     1321 cggttcgagc tgaccaagac ggaaatcttt cacagcagga catcgtgcgt acccagactg
     1381 cacttgaggc attgatcgcc tcacttgacc gcgtttccga tcgcgttgcc actattgaaa
     1441 aagacctgcg caaggatccg gcgaaagaag caatcggcga gaccggaatt ctcgagctaa
     1501 cccagatcgc tgccatcgcc acgaaaggca atattgaaac atcgccgcag gttccgccgg
     1561 ctatagaact gccaacacct ctcgcatcga gcgccctcga tcacgaccgg ggtgcgcctg
     1621 tctcttttgc gcggacggaa tccttcagca agagcgcgca tcccgtgcag tcgccggcgg
     1681 cgggcgccga tttgcgagct gatgagccac tggagccggg ccttgggcgt cgacgaattt
     1741 cacctcgtcc ggggagtcgc attgccgctt cggaagcggc actcgggatt gctcgacccg
     1801 gtgccgtcgc ttcaggctca aagtcgagct ttattatggc tgcccgccgc gctgcgcagg
     1861 ccgcgagcca ggacccaaaa aaccgccctc gtccggaact ccacaaagtc ggtggcgaaa
     1921 aaattacgtt gcgaggggaa attgcgaggc gcggcaaggg aatgctgctg gccgcgagca
     1981 tcgtcgccat tgtcattggc tcgatccagc tcacaagcaa cattttcgat ttccgaatgt
     2041 tcgagtcgca ggacgccaag ctagccaaca cttttgcaac ggacgtcaac agcgatagcg
     2101 cagttcaaaa cgcggaaaat gagacgactg ccagcattgc cgtcgaaaag accgatacgt
     2161 cgaaattgcc ggaaggcgac ggcacggcgg acctacttgc cgctccggct cttcccagtt
     2221 tgacacccgc gcgcccgaca acaaaacccg accccgctgc gccgctctca ttgaacacgt
     2281 tcgacagtag cagcgacggt cgggtacccg tgccgaaccc gccccttctc aatcctcctg
     2341 ccttgggagc acccacgcca aagaacgaag cgaccgcaac aattgcacgc aacgcgaccg
     2401 agacccggcc gaaccgtcaa tcggcgcctg cggcccaacc gtcggccact gacgggctgc
     2461 cgcccgcgat cggcgcagca cggctgcgca acgcggcatc tgccggtgac cccgcggccg
     2521 catatgaaat tgccatgcgt tatctggagg ggcgcggtgt gcccgccaat ctggaagagg
     2581 ccgcccggtg gtttgagcgc gccgcaagca agggactcgt accggcacaa ttccgctatg
     2641 ccagcatgct cgaaaagggt cagggcgtaa aaaaggacct ccctgcggcc caaaaactct
     2701 acgcggtcgc cgccggtaag ggtcatgcaa aggcaatgca taaccttgca gtgatttatg
     2761 ccgatggcat cgaaggaaag ccggattatg ccagcgctgc gttatggttt cgcaaggccg
     2821 cagagcacgg catagccgac agccagtaca atttcgccat attggcggcg cgcggtctcg
     2881 gcaccgagaa aaacttgccc gaagcgtata agtggttcgc gctggcagcc gcccaaggcg
     2941 atcgcgacgc gggccgcaaa cgcgatgatg ttgccgctca catggacccc caggccctcg
     3001 cggctgccca ggaagccgtc aagggcttcg cggttcagac gcagccggcg accgcaacgg
     3061 ttgtaccgga gccccccggg ggttgggatc ggatgagttc tccatcgcag gacaggccgc
     3121 gcgcggcagg gccgctgtcg ataagctctt tcaacccggg aaaactgtaa accgccgctg
     3181 tccgccgtac cacaacctga tcacaggcgg tctcatcgag taagataaag tgaagctgag
     3241 ccggttggtc acgaccatct cgtgtcaaac ggaatgctga cgtttccggc tatcttggtg
     3301 ttaattattc aaagaacaag ctcgccacgg cacattgtcg ctcgggcgca actcaatgtt
     3361 ggactgaccg cttgcaaatc tacctgccca tcgccgattt gccggtaaat gtcttcctgg
     3421 ttttggggat gggacttgcg gtcggttaca tctccggcat gttcggcatc ggcggcggtt
     3481 tcctgatgac gccgctgctt attttcatcg gaataacacc ggcggtcgct gtggcaaccg
     3541 tgtccagcca cattgcggcg tcgtcattca cgggtgcaat cagctactgg cgcaagcggg
     3601 ccctcgacat cgcgttggca ctgatgctgc tcagtgccgg cattgtggga acggccattg
     3661 gcgtctggct gttcaccgaa ctgcgcgccc tcgatcagct cgacctgatg atcggcctct
     3721 cctacgtcac gttgctgacg gtcgtgggag cgacgatgat ctacgaaagc tggcgcgcca
     3781 tcatgcggac gcgtcatggc atgccggcaa cgctgcgccg gccgggtagc cacacatggt
     3841 ttcacggctt gccgttcaag ctgcgcttca agcggtcaaa aatatatgtg tcggcaatcc
     3901 cggtgtgggc gatcggattg gtgatcggat tccttggagc gatcatgggc atcggcggcg
     3961 gctttttgct ggtgccgatg ctgatctatt tgctccgcgt gccaacggcg actgtcattg
     4021 gcacgtcgat ggtgctcacg ctggtcacga tggcctcggc gaccgtgatg catgccgcca
     4081 caaatcatct ggtggatgcc gtgctggcat tgatccttat ggttggaggc gtcatcggcg
     4141 cgcaatttgg tgcgcgtaca gggcagaaga tgcgcggtga gcgactgcgg ttgttgctcg
     4201 gacttctggt tttcgccgtg ggttgccgat ttgcctacga gctggtggtg aagccggacg
     4261 atctttattc gcttcgctac gtgaggagcg aatgatgcgg cggtttgcac aaatcctcgc
     4321 gcttgcgctt cttgttttcg gcgcggagcc ggccgcggcc gagcggctcg tggtttcttt
     4381 gtcaaatcat cgcgtcgccg ttacatccaa tttcgtcggc gaggaacttg tgctgttcgg
     4441 caccatcgag cctgaaccgc cagcgcgtgc gctgcggccg ccgtacgatc ttgtcgtaac
     4501 ggttaccgga ccgcgccaaa ccatccggac aagacgcaag caacgcatcc tgggcatttg
     4561 ggtaaatgcc gattcgcgcg aattcgtgcg ggttccagcc tatcttgcgg tcctgagcag
     4621 ccgtcccgtc aacgatattg ccagcccgga tacgctaaga cgtctgcagc tcgggctcga
     4681 taatttcctc ttgccgcagc ggatcggcag cgactttgcc gatacggtgc gcgatgatcc
     4741 gttccgccgg gctttcgtac gactgcaaac ccagcagggc ctgtaccgcg aatcggccac
     4801 cgctgtgacc tttctcactc cgacagtgtt ccgcgcagcc gtgcccatgc cggcggcggt
     4861 accgaccggg agttatggaa ttgaggttga gcttttcacg ggtggggcgc tggtcgcgcg
     4921 taccaattcg gcgctggacg tgatcaagac cggcttcgag caatacgttg ccgatgcggc
     4981 gcgcgactat ggtctcctgt acggaacggc aactgcttta atggcgcttc tgatcggctg
     5041 gttcgcgagc attgtttttg cgcgcgacta gtccggcagg cagcgatttg cggtaaagga
     5101 atagacgcgc gcgtctccga gcagatatgc cgtaaaagcc agcgtaccga aaaggtcggc
     5161 aaatgctgcg tcgcgtatgt tcaggccgcc tgtaaatgct ccgaaggcgg gcatcaccag
     5221 gcgagttcgg tctgcggcaa agcaacggcg gctcaccgcc cggccccggt gcgcgatccg
     5281 cgctaccgga tgcagatggc cgctgatttc gccggcagcg ccattcggtt cgtgacggaa
     5341 cgtcagcacg ccaattgtca gcgtttcctg gaagatgccg ccaatgccat cggccggttc
     5401 cggatcgtga ttgcccgtaa tccatatcca gtcgcgaccg cgttggaggg cctgcagcgt
     5461 ggcgcgatcg ttctcagaca accggcccgg cccgccgacg tcgtgaaagc tgtcgccgag
     5521 cgcgacaata cagcgggggg catagtctgc agccaaatgc gagacccggg ccagcgtcgt
     5581 cgcggtatcg taaggcggaa ggagctgccc gcgtgcggca aagctcgagc ccttttcaag
     5641 gtgcaggtcg gcgacaacca gcaggccgtg ttcgtgccag taaagcgcgc ctcgcggatc
     5701 ggcgagcagc gggacgccgg caagaacaat gagattgccc tcgctttccg cctgatttcg
     5761 cgccgcttgg ctcaactcat ggcttccttg atcagctggt ccgcagcctc ggccaataga
     5821 gtgtctgagc attcgccata gaccgtttcg cgcccgatct cgagcaacac gggaaccgag
     5881 agcggagaaa catggtccag cgctttatga acgattcgcc ccctgacgcg cgagagcatt
     5941 tcgccaaggc gctggatatc cagcaggccg gtcgcagcat cggcgcgcgc cgcccgcaac
     6001 aggacatggt cgggctgatg cttgcgcaga acgtcgtaga caaggtcggt ggagatggtg
     6061 agctgacggc gcgacttttc ttctccggga aaccttttct cgatcaaacc ggcgataatg
     6121 gcgcaattgc gaaacgtgcg cttcatgagc gccgtttccg cgagccaggc ttccaggtcg
     6181 tccccgagca tgtcctcatc gaacagctgg gccagcgaaa gatcaccacg cgcgatgcgc
     6241 aaggcgacat cgccaagccc ccacaccgcg agcgcgtatt cgttggcgac gaaaccaagc
     6301 ggcctcagcc gcgcgcgttc gaggcgacgg gtcagcagca tgccgagcgt ctggtgcgcc
     6361 agtcgtcctt cgaatgggta gcaaaccaga tagtatttgg cggcgcgcgg aaaggtctcg
     6421 accaatagat cgccggcctt gggcaacacc gagcgccatt gctggatttc cagccactcg
     6481 cgcacctgtt ccggcagtgc acgccatgcg gctggctttg ccaggagcgc tctcacgcgg
     6541 gcggcaagat aagtcgagag cggaaacttg ccgccctcat aggcaggcac tttggggtcg
     6601 gtagcgtccg agcgcgagac atagacctcg tcttcgacca gcgcctcgta tctgagaatt
     6661 tcgccggcaa acacgaacgt gtcgccgacc ttcagcgttt cgatgaagta ttcctcaacc
     6721 tcgccgagga ggcgccctcc gcgtggaaca actttgccgc tgcgcctgga acgcaccagc
     6781 cgcaccttga tcatatcggc ctcgacaatg gtgccgacgt tcattcggta gcgctgggcg
     6841 acgcggggat gcgtaatgcg ccaacggcca tccttgccct gcctgatctt ggcaaaacgc
     6901 tcgtaggcct tcagggcata gccgccggtg gcgacgaaat cgacaactgc gtcgaagtcg
     6961 gcgcgagtca gcaaactata gggcgctgcg gcgcgcactt cggcatacaa ttcatctgcc
     7021 aggaaaggct cgccgcaagc gcgacccaga acgtgctgcg ccaacacatc gagcgctccg
     7081 gtgcgcagcg gcggtgtatc ctgcgcattc tctgccaccg cgtcgattgc aacgcggcac
     7141 tccagcacct cgaagcgatt tgccggcacc agtacagctt cggacggttc gtccagccgg
     7201 tgattggagc gtccaattcg ctgaagcagg cgcgagcagc ccttcggcgc tccgacattt
     7261 atcacgagat cgacatcgcc ccagtcgacg ccaagatcga gggacgacgt gcacacgacc
     7321 gcgcgcagct ttccggcggc catcgcgtct tcgacgcgac gtcgctgcgc cacatcgagc
     7381 gacccatgat gcagggcgat tgcgagattg tcgtcgttcg ctctccataa ttcctggaaa
     7441 agaaactctg cctggctgcg ggtgtttacg aaaaccagcg tcgtcttgtg ggtcttgatg
     7501 tgggtataaa tctccccaag cgcatggcgt gctgaatgtc ctgcccaggg cagatgctcc
     7561 cgggtgtcaa gcatcgcgac aatcggctgg gcgccggctt ccgcaacgac cagatcggca
     7621 cgcgcctctc cttgcaacgg ttgccgcaca aggaagcggc acagttcatc gggctcggcg
     7681 acggtcgccg atagtccaat cgttgtgagg ccgggtgcga gcgcaaacag acgagccaac
     7741 ccgagcgaaa gcaagtcacc gcgcttcgag gtaacgagcg aatgtagttc gtcaagaacc
     7801 acgcgcttga gcgtgccgaa cataaaaggc gcatctgcac tggccagcaa cagcgccagc
     7861 tgctcgggcg tggtcagcaa gatgtccgga ggatcgcggc gctgtcgttg ccgtttaaat
     7921 acaggcgtgt cgccggtcct tgtctcaagc cgaaccggca ggcccatctc ccgcactggg
     7981 atttcgagat tgcgcgcgat atcgactgca agtgccttca gcggggagac ataaagcgta
     8041 tgcaggccct gcgagcgcac aaccgtgcgg ccagccgatt tcaaatttct cgagcgaagg
     8101 ccgcgctcgt tcagttcgac cagcgtcggc agaaagccag ccagcgtttt gccacctccg
     8161 gtcggcgcaa tcagcaatgt ggatcgtccc gccctgaccc gggacaggag ctcgagctga
     8221 tgcgcgcgcg gctgccagcc acgagcagca aaccagcgct cgaagatgtc gggcaatcgc
     8281 actctggtgt cgaaaagatc gcgcgccggt tccatgatca gcttccggcc accacgatca
     8341 gtccgggcac cggagaacct ttttcggtgc gagtagaagc acaatcaatg ctgattagtt
     8401 tcaagccggc agcggccaac gacgcctcga cgtgcgcctt gccgtgagca taacgcagcg
     8461 tctcacgcaa cgtgatgcca tccccctcat gtgtctcgac actgaaagca aaatggcctc
     8521 ccggcgccga cacctgtgcc acggccgcaa gcagcggttc gagatcatcg aagtacgtga
     8581 atacgtcggc ggcgatcaca agatgatagc gtgcgccaat ctcggtctcc ccagcgagga
     8641 aagccagaat ctcgctttcg acaaggcgat cgaagagtcc ttttgcacgc gcttgcccca
     8701 gcatgccgcg tgaaagatcg acacccacca tccaatcgct gaatggccgc aacggcaaag
     8761 cggccaggcc cgtgccgcag ccgagatcaa gcacggagcc gaacctcatt cgtgcgtcgg
     8821 catgcgctgt ttcaatggcg cggaagagaa gttccggcgc acgataattc aagccactgg
     8881 tcagggcatg atcgaattcc ggcgcgtagc cgtcgaataa cgctcgaagg tatccctccg
     8941 tcctcgcgcg cccggaacca ccgccgaggc gcacaagtcg aagcgcggcg ccctggcggt
     9001 cgcccgggtc ggcgatcaag gcctgctcga aagccgcgat cgcacccgag cgatcaccaa
     9061 gcttttcccg cagttcgcca agcacgaacc aggctggcgc ataagcaggc acaagctcga
     9121 tggcctgcat catgaggtcg gcggctccgg taaggtcgcc tttcgattgc cggtcgcgcg
     9181 cccattcgaa gcggcgatcg gcaacgacat caccggatga gaggaaaatc ggatccattc
     9241 ggtaatcctg tcatggccgg gcttgtcccg accatcccga tatatgaggc acgacattac
     9301 cctcctcggc gagagcgcat gagcagccgc aagtcattaa acccgacttg cggtgcaaag
     9361 cccggcgatg acaatgcaac tcaagttact atctaagcac gatgcgtccc gaagatattc
     9421 tggttccgac gccatcgggc gtgtgctgca ggcccggcgg cttccatatc gatccgacgc
     9481 gcccggtcga aaaggccctg atcacccatg gccattccga ccacgcgcgt gccggtcatg
     9541 gcgcggtgct ggcaacgcag gaaactctcg acctcatgcg catccgctac ggcgacaatt
     9601 tcgccggcac cacgcaggcg atcagttatg gcgagaccct caagctggat ggcgcgcggg
     9661 tcagctttca tccggccggt catgtgctcg gctctgcgca gatccgggtg gaatgtaatg
     9721 ggctgcgtgt cgtcgcttct ggcgattaca aggacgtccc tgacccgacc tgcacgccat
     9781 tcgaaccgct gagatgcgat gtctttatca ccgaggcgac cttcggtctg ccggtgtttc
     9841 gccaccatga tgcggctggc gagatcgcca agctcctgca atcggtcagg cttttccccg
     9901 agcgcgcaca tttggtggga gcctacacgc ttggcaaggc gcaacgtgtt atggcgatgc
     9961 ttcgaacggc cggttacgac aagccgatct tcatccacgg cgcgattgaa tcgaccaccc
    10021 gctactatca cgatcgcggg atcgatctcg gtcaagttga gctggcgcgc gacgtcaaca
    10081 aggccgagct ggctggacgc ataatcatct gcccgcccag cgccctcggc gacctgtggt
    10141 cgcggcgctt tccggacccg gttgcggcct tcgcctccgg atggatgcgc gttcgcgcgc
    10201 gtgcgcgaca gcgtggcgtc acgcttccgc ttgtgatttc cgaccacgcc gactgggacg
    10261 gcctcactgc ggccattgcg gcaacaggcg cctccgaagt gtgggtgacg cacgggcagg
    10321 aagatgcatt ggtgcattgg tgtaagacaa acggtctgaa ggcgcggcca ctggacatcg
    10381 ttggctatgg cgatgaagag gacaacgagc ctggcagcga ggctgaggca tgaatcgctt
    10441 cgccgagctg ctcgatcggc tggcgtacga gccggctcgc aatgcgaaat tgcgattgat
    10501 cagcgattac ctgcgcggga cgccggatcc cgagcgcggc tgggcactcg ctgcgctcac
    10561 cggtgcgttg atcttcaagc acgcaaaacc cggaatgatt cgtgggttga tcgccgagcg
    10621 taccgatcct gtgctctttg cgctttcgca cgactacgtc ggcgatttgt cggagaccgt
    10681 ggcgctgatg tggccggctc aagagagacc tgttcccctt cccccgcgta acggtgggga
    10741 gggaggggag aagaaaacgc caacactgtc tgaagtcgtc gaaacgcttt cgacgctcgg
    10801 caaatcccag ttgcctgccc agattgcccg ttggctggat ggactcgacg agacagggcg
    10861 ctgggctctg ttgaagctgg tcaccggcgg cttgcgcatc ggcgtttcgg cccgcctggc
    10921 caagacggcc gctgcatcga tcggggacaa gtccgttgat gagatcgaaa tcctgtggcc
    10981 gggacttgct ccgccttatc tggacctgtt cgcctggctc gaagggcgcg ccgacaagcc
    11041 ttccgcacgc gatccggcgc cttttcgacc gccgatgctt gcgcacgccg cggaagagcc
    11101 cgatctcgcc gctctcgcct cgaccgattt catggccgaa tggaaatggg acggaattcg
    11161 cgtgcaggcg gtggcgggga gcgccgacca tggcggattg ctggctcggc tttattcgcg
    11221 caccggcgag gaaatttcga aaagctttcc cgatctgctc gaagcgcttt gcctgccctg
    11281 cgcgatcgac ggtgaattgc tcatcatgcg cgaccgtcgc gtgcaatcat tcaatgtctt
    11341 gcagcaacgt ctgaatcgca aggcggtgac gccgaagttg ctggccgaat tccctgcgca
    11401 cctgcgtgcc tacgatctgc tcgccgaggc cgatcaggat ctacgcgacc gcccatttgc
    11461 cgagcgtcgc gatcggctgg aaaagctggt ggccaagctg gacgacccac ggatcgatgt
    11521 ttcagcactg atacccttcc agacctggga cgatctggcc gcggcacgcg ccgatcctgc
    11581 gtccgcgggc gcaggacggg acgccgacgc cgtcgaaggg gtcatgctca agcgccgcga
    11641 tgcgccgtat gtgcccggtc ggccgaaggg cccttggtgg aagtggaagc gcgacccgat
    11701 gcttattgat gcagttctga tgtatgcgca gcgcgggcat ggcaagcgct cgtcgtatta
    11761 ttccgactac acgttcggag tctggaacag gggcgacaac ggcgaggagc ttgtgcccgt
    11821 cggaaaagcc tatttcggat ttaccgacga agaattgatc cagatcgacc gatttgtgcg
    11881 ccggaatacc atcgatcgtt tcggcccggt ccgcgaggtc gcgcacgaac ctcatcgtgg
    11941 actcgtgctg gaagtggcat tcgagggatt gcaacgctcg acacgtcata agtccggtat
    12001 cgcgatgcgt ttcccgcgaa ttaatcgctt gcgctgggac aagccgcctg gcgaagccga
    12061 tcggttggaa acgctccaga acatgttggc gcgccgcgag cgtgctacag tggccgcgaa
    12121 cggaggcacc catggctgac aatcacgttg cgcgttgggc gggcggatca ccgttgggcg
    12181 tgctgatgcg cctggtttta gtgtcgatct tggtcggcgt gatcctttcg gcgcttggcc
    12241 tcgatccatt cgacatcttc cacagcatcg agcggctgat ccgttcgatc tggaacatgg
    12301 gattcgatgc agttcgttgg gtgtggcgtt atttcctgct cggagcggtg atcgtcatcc
    12361 ccatatggat catcatgcga ctggtcaacg ccccgcgcgg gcggtgacta atccgttcct
    12421 caggccggcc agctttccgc agtgatcgtg gcggcgtcgc ttccgaccat cgatgccagt
    12481 gaattgcggt ggccgcgtct gagcgcagcc gcaaggtcct ccttgatctc tgtcaccacg
    12541 ccgaccccgc gatagaccag cgccgtgtaa agctgcaaaa gcgtggcgcc tgccttgatc
    12601 ttggcgatgg cggtcgagcc ggagtcgatg ccgcccacgc cgaccagcgg aaatgcgccc
    12661 tcggtgcgca cgtaagtctc cgccaacatg cgggttgcaa gcctgaaaag cggtcggccc
    12721 gacaggccac cctgctcccg cgccatgtcc cgctcacgca acgagccggg ccgcgagatc
    12781 gtggtgtttc cgacgatcat cccgtccacg cgccgcttcc gtgcaacgcc gacgacatcg
    12841 tcaagctcgg gcagcgtgag atcgggcgca atcttgagca gaacaggctt cgggccggcg
    12901 cgtgtgcgca ccctttcgcg tgcttcgatc acgcgggcga ggagatcgtc cagcactttt
    12961 gcctgttgca aatcgcgcag gcccggcgtg ttgggagagg acacgttgac ggtgaagtag
    13021 ctggccaccg ccgaaaaagt ttcaatcagc cgcgcatagt cctcgacgcg atcggtcgag
    13081 tcgcgattag cgcctatgtt caccccgaca attccaccag cattgcggcg ggctgcaagc
    13141 cgaatatgaa ccgccgcagc accctcgttg ttgaagccga gacgattgat gaccgcctgg
    13201 tcgctcacaa gccgtaaaat gcgcggcctc ggattgccgg cctgcggccg tggcgtgatt
    13261 gtgccaacct cgacaaaacc aaagccaagg cgcagcagac catccacggc ctccgcgttc
    13321 ttgtcgaagc cggcggccag accgagcgga ttgggaaatt tgagtccgaa ggctagcaca
    13381 gcgagttcct cgctatcggc cgccgccttg gccaaaggca tgaaccgcag cgccttgatc
    13441 gcaagcctgt gcgcgtcttc cgggtcgagc gcgcgcagaa atgggcgaga caggcggtcg
    13501 aaaagaccga tcaacaggca aacctccgaa ccaacatccg gccgaatcct atcggccaga
    13561 gcaaggctta ctcaaggctg acgccgaagg aaactgttgc ggtggggggg cgactcaagg
    13621 ttataattcc tatcctcctc gtcacggttg catgcgggtg tccgcctcca tggctatgct
    13681 gacccacaac cagatctgga ccgccatcga ccgcctggcg gcgcgcgcca agctcacacc
    13741 atccggcctg gccaggaaag ctgggctcga tccgacaacg ttcaacaagt ccaagcgggt
    13801 gacaccggaa ggacgaccgc ggtggccttc cacagaatcc gtagccaagg cgttgcaggc
    13861 gacgagtaca aagttcgata ccttcgtgac cctgatcacc gacggcggca aggcagcaat
    13921 gcacaacgtg ccgctgatcg gtcttgcgca agccggggcc ggcggctttt tcgacgatgg
    13981 cggcttcccc gtcggcaagg gctgggagga catcgctttt cccgccgtga gcgacgagca
    14041 cgcctacgca ctagaaatct ccggtgactc gatgaagccg gcctatcgca acggcgatgt
    14101 gatcatcgtt tcgccgggcg caacggttcg aaaaggtgat cgggtcgtgg tcaagaccaa
    14161 ggatggcgag gtgatggtca aggagctcaa acgcaagact gcgaaatcag tcgagctcaa
    14221 atcactcaat gccgaacacc gcgatcgcac actgcccatg tcggaggtgc tttggcttgc
    14281 gcgcatcgtg tgggcaagcc agtagctttg tcgttagcgg ccccgccgcc ctggccactt
    14341 aagcggagcg tgccaacgcg ccgtcgatca tgtcgatggt attctgcaag ccatagaccg
    14401 ccacgaatga gccgaaacgc gggccttttt cctgtccgag caggacctga tagagcaggt
    14461 tgaaccagtc gagcgaaact ccaggcttgc cgtccttcgc cttctttttg tgatcgagga
    14521 acggctcgcg tcgcccaacc tcgtagacca cgttctggat ttcttcggcg gtcgccttcg
    14581 cctgcaactg cgaaagcgca tcgcgcaaat cgatgagcgc cgcgcgttca ggatccgtcg
    14641 gctctcggaa cgtcttcgtg ggcaacacaa agtcacggaa atagtggatt gcatattcca
    14701 ccagctcatt cagctttgga tgcgtcttcg gcgtcacgcc cggcctgtag cggccgatga
    14761 acccccacaa tgtctctgca ttctcggcat tcgacgatga caccagcgtc agcagcatcg
    14821 tgaatgaaat cggcatgtcg atcttcggcg gtttgccgga gtgaatatgc caaaccgggt
    14881 tggaaagctg ctgccgcggg tcctgccgtt caaacccatc gagaaactga tagtactcgt
    14941 cgacgttgcg cggaatgacg tcgaaataga gccgcttggc ggctttcggc tcgcggtaca
    15001 tgaacagcga caggctttcc ggactcgcgt agcgcaacca ttcctcgatt gtcagcccgt
    15061 tgccttttga cttggagatt ttctggcctt tctcatcaag gaagagctca tagttaaatc
    15121 cctcgggagg catgcctcca agcgcgcggc agatctcacc ggaaagtttc accgagtcga
    15181 tcagatcctt ccccgccatc tcgtaatcga cgccaagtgc aagccagcgc atggcccagt
    15241 ccggcttcca ttgcagtttg cagcggcctc ccgtgaccgg cgtgacgacc tgttctgctg
    15301 tatcggggtc ctgataggtg atcgtgccgg ccttggcgtc gtgcgcggtc acgggcacct
    15361 gcagcacgat cccgctctct ggcgaaaccg gcaggaacgg cgaatagctc gccgcccgct
    15421 cttctcgcaa cgagggcagc atgatggcca tgacctggtc gaaacgcgcc agcactttca
    15481 gcaaagcctg gtcgaagcga ccggacttgt agcattcggt tgacgacagg aattcgtact
    15541 cgaagccgaa gtgatccaaa aaggctcgca gacgcgcatt gttgtgttcg ccgaagcttg
    15601 gatgggtgcc gaacggatcc ggcacctgtg tcaaaggctt gccgaggtgc gcctccagca
    15661 tgtccttgtt cggcacattg tccggtactt tgcgcaggcc atccatgtca tcggaaaacg
    15721 cgatcaatcg cgtcttcacc ttatcgtcgg tcagcacacg aaatgcatgt cgcaccatgg
    15781 tcgtgcgtgc gacctcgccg aaggtgccga tatgaggcag gccggaagga ccgtaacctg
    15841 tctcgaaaat cacctcatcc ttgggccgct tcttgagccg gacgacgatc ttgcgcgctt
    15901 cctcgaacgg ccaggcgttc gactgctcgg ccagttgacg caaggaagcg gcggtttcgg
    15961 ctatggacat tattgtctcc ggcgcgcgga cactagaaac gccgcgccac aacgtcaaat
    16021 gcgcgattca aaagggacta accggaaaat agcgcagcca cagatcggtg aagcgcccct
    16081 tctcccataa tcggaacagc gcccaattga acgcctgtcg cagcagatcg ttaccgcgtc
    16141 tcactgcaat gccgacgcct tcgccgaaaa aacggctctc aagatacggt ccaccccgaa
    16201 aaacgcagca gttcgccgag tcggtgccgt tgagccagaa ggccagtgac acgccgtcgc
    16261 caaaaaggag atcgacctcc cctcgcttca gcgcaaagcg ggcagcgtcg gaatccggat
    16321 aaggacgcag ctcggcctcc gtgaagaggg ccttgaggta agcttcatgc gcagtgcctg
    16381 cgacaaccgc gatttttttc ccttcgagaa cttccgggcg aacgtcttcg atcgtactgt
    16441 cgcgtcgcgc cacaaatcgt gccggcgtgc ggtaataggg atcgctgaaa tcgagccgcg
    16501 tgcgcatctc gggcgtcgca gcgatcgagg ctataatggc atcgccgttg ttgctgttga
    16561 gcgctccgat caaagtatcg aaccgacgca tctgcaccgt gcaagcgacc ttaagctctt
    16621 cgcaaatcag cctggcaaga tccacattga acccggtggg tgcaccgtcc ggcccggcgt
    16681 aattgaacgg cggatagtcg gtttcggtca ggaagcggat gatgctgatg cgggacaggt
    16741 cgggacgctc cggccgccgc cgcggatccc agaagcttgg gaccgccatg gaatcgaccg
    16801 tctttgccgc cggtgcggac ggggccgacg acggaccctt ggtggtctgc gcatgcgccg
    16861 ccgccgccgc gaacacgggc aatgtcacag caacagccaa gatccgggcg ccacgccgac
    16921 acgaacctga aagcggcatc cacctgtctt tcatcgagaa acggcggcga ccatagcatc
    16981 gctgtggcgg cgggccagtc cgaatcgcaa cagccctgaa attctttcct gggttcaatc
    17041 gcccgtcagg tgcttctcga tctcatgcac gggcattttg acaaaatcct tgtccacctc
    17101 ggcgcgaacg gcactcttta gagcgtgcgt ataggctgga cggatcactc caagcgcgcg
    17161 cggcggggcc accacgatca gagatttgac cttccccgac gtaatcgccg catcgagatg
    17221 ttgaaccagt tgggtgagaa aagtccgttc cgattgatcg tgccagtcgg tctgatcgac
    17281 cgcgcttcgc atattgccga cggaattgac agcgcgcccc ggggcatctg ttcccagttc
    17341 gtgcgtcgcg aggtccttat gttcgaagac ctggatcgtc ttcagattgg ggaatttgat
    17401 atcgccggaa ttttgcagaa tcagagcctt ggcaccgtca catacaacga cccactctcc
    17461 atgtctgatc aaaagtgcgg ccattgatta ctcctcaagt acagcaggtt aaagcgacgc
    17521 gcgccggagt tttgctctgg atcaaacgct gcaaggccgg ttttgtgccg tagttttcag
    17581 ttcgtgccgt ccagcagacg tcgggcgatc acctgcgcct ggatttcggc cgcgccttca
    17641 aaaatgttaa gaatccgcgc atcgcacagt atgcgagaga ctggaaactc cagcgcaaat
    17701 ccattgccgc cgtgcacttg cacggcattg tctgcggcgg cccacgcgat cctggcagcc
    17761 agcagcttgg ccataccggc ttcgaggtcg caacgtcggc cggaatcctt ttcccgcgcg
    17821 gcatgatacg tcagctgccg tgcaatcatg atttcgaccg ccatcatgac aatcttgtcc
    17881 gcaacccgcg gaaagccgac gatcggggcg ccgaattgca cgcggttctg cgcataacca
    17941 agtgcctgtt ccatggctgc ttgcgcgact ccgatagccc gcgcagcagt ctggatgcgg
    18001 gcggattcga aagtctgcat gagctgcttg aagccaagcc cttcgactcc tcccagcagg
    18061 ttctcggctt tcacttcgaa t
//
LOCUS       DATDHO010000415         1501 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_19924, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000415 DATDHO010000000
VERSION     DATDHO010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1501
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_19924"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            281..1486
                     /locus_tag="VIY07_08095"
                     /pseudo
     CDS             281..1486
                     /locus_tag="VIY07_08095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180403.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent formate dehydrogenase"
BASE COUNT          318 a          476 c          439 g          268 t
ORIGIN      
        1 atttcagtca ggttggtctt tgtccagatc ggccgataga ccgcttctat gggccgttcg
       61 gatgcgtcta cttgatttct gccgctcgcg ggagtggggt gttgcggatc ggcaattcca
      121 taggccgcgc tttaagcccg ccgatcagga aacgcgaggg tggttgatga gttttactat
      181 tagcccggtc ccgcccgatg cgacatgtgg cagcagagct ccgactccct gcccgtgctc
      241 ctctgacctg cctcatgccc atccatgaag gagctcaccc atggcaaaag tgctcgccgt
      301 tctctatgac gatccggtca cgggctatcc gcccaaatac gcccgcgacg acattcccaa
      361 gatcgatcac taccccgacg gcatgacgac gccgacgccg aaaaaaatcg atttcaagcc
      421 gggcgaactg ctcggcagcg tctcgggcga acttgggctt cgcaaattcc tcgaagatgc
      481 cggtcacacg ctcgtcgtca cctcgagcaa ggacggcaag gactcagtgc tcgacaagga
      541 gcttgccgac gccgagatcg tgatctcgca acccttctgg cccgcttaca tgacgcgcga
      601 gcggatcgag aaggcgaaaa agcttaagct catcatcacc gccggtatcg gctccgacca
      661 taccgacctg caagctgcga tggacaaggg cattaccgtc gccgaggtca cctactgcaa
      721 ctcgatcagt gtggccgagc acatcgtgat gatgatcctg gcgctggtgc gaaactacat
      781 cccgtcctac ggatgggtga tcaagggcgg ctggaacatc gccgactgcg tcgaacgctc
      841 atacgatctc gaaggcatga atatctgaac ggtcgccgcc ggccgcatcg gactggcggc
      901 gctccgccga ctgaagccgt tcgacgtgaa gctgcactac accgacaagc atcgcctgcc
      961 cgagaaagtc gagaaggagc tcggcctcac ctttcacccc aatgtcgagt cgctggtgaa
     1021 ggtatgcgac gtcgtgacga ttaacgcgcc gcttcatccc gagaccgaag gcatgttcaa
     1081 cgacaagctg atcggcaaga tgaagcgcgg tgcttatctg gtgaacacgg cccggggcaa
     1141 gatcgtcgat cgcgacgccg tggtgcgcgc gctcgaaagc ggacagctcg caggctacgc
     1201 cggcgacgtg tggttcccgc aaccggcgcc caaagatcat ccttggcgca ccatgccgca
     1261 tcacggcatg accccgcata tctcggggag ctcgctctcg gcacaggcgc gctatgccgc
     1321 gggcacacgc gagattctcg aagcccattt cgcaggcaag ccgatccgca ccgagtatct
     1381 gatcgtggac aagggcaagc tcgcgggcgc cggcgcccat tcctacacgg ccggcgacgc
     1441 caccaagggc tccgaggaag cggcaagatt caaaaaggga gcgtgacggt accccgatct
     1501 c
//
LOCUS       DATDHO010000416         3547 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_119622, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000416 DATDHO010000000
VERSION     DATDHO010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3547)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3547)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3547
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_119622"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..512)
                     /locus_tag="VIY07_08100"
     CDS             complement(<1..512)
                     /locus_tag="VIY07_08100"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY6381751.1"
                     /translation="MLAIANERGIPTLKRYFGVEVAREVRREHGPASVVTAANCFAHI
                     EDVHAIVDGIIEMLKPDGVFISESHYLVSLLDKLQYDTIYHEHLRYYSLASLKHLLEM
                     HDLEVFHARPIPSHGGSIRVYSAPRGTHSVQDSVGRMLAAEPRGATLLKRLETFRSEV
                     ILSKLRLIAML"
     gene            496..768
                     /locus_tag="VIY07_08105"
     CDS             496..768
                     /locus_tag="VIY07_08105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381752.1"
                     /translation="MAIANIGWLNADHTLAARFEIRQQCSIVGADIDDQVLAGQTKHA
                     GALALQVGKIVPQQFRRATGVRILRRKDDGWIHREPELNKLAVAAM"
     gene            complement(953..1933)
                     /locus_tag="VIY07_08110"
     CDS             complement(953..1933)
                     /locus_tag="VIY07_08110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6381753.1"
                     /translation="MSRILVTGGSGFIGSGLVKALVKRGHRVRVLDDNSRGKASRLAD
                     VADDIEFIAGDIRDSGAVARATQSIDEVHHLAYVNGTQFFYNQPDLVLDVGVRGMVNV
                     IDACRKHDIGTLVFASSSEVYQTPPQIPTDENAPLTIPDPLNPRYSYGGGKLISELMA
                     INFGRKYFDRVLIFRPHNVYGPDMGWEHVIPQLALRLDAAARSHPAGTLKFQIQGTGK
                     ETRSFCFIDDLVAGVMLMLEKGEHLGIYHVGTAEEISIADLARRIAGVRGRDIELISG
                     KSMPGGAARRCPDISKLARLGYKPRVLLGEGLKPTLDWYWSNIELAPKEA"
     gene            complement(1930..3033)
                     /locus_tag="VIY07_08115"
     CDS             complement(1930..3033)
                     /locus_tag="VIY07_08115"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6381754.1"
                     /translation="MPRKAKSGLARRRIVIRLGIVGTNYGRTVQLPAFRADPRCEVIA
                     LAGSNSARTAELAKAAGVPKAYGDWRGLVEDKDVQVVAIATLPSLQAQIAIHALQLGK
                     PVFAEKPLASDLGTARAMFRQASMSRKPTMIDFNFHQIVAWQRTKAMLDANAIGALRH
                     VTVHWHVESRAIQMRMRNWKTVGDDGGGVLGNFISHCFHYLEWFCGPIEGLSARVSGL
                     PGDSELETTVGMALQFAAGPLVALSMSCASYRGTGHRIEFFGEDGTLILHNPGADYMR
                     GFELWHAGRDAPLVRVATDDPVDAKYPDGRIAPVSRLAKIFFDAIEGGGTATPGFAEG
                     YRVQQFIDAARRSHQHGRWIDVARETAKEEMRV"
     gene            3094..>3547
                     /locus_tag="VIY07_08120"
     CDS             3094..>3547
                     /locus_tag="VIY07_08120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381755.1"
                     /translation="MTAVQEDNVGSGWRKLFALLPVVLAIGLPINNISDCVLLVILAV
                     VICCGEVSARPRAWAAAAAIVVAGVLAQALLSPPRIEEGHNVFLPSPALERLATNMVA
                     WLTGPSALAWHPYAPLVVALIALHAVALAIVIYVTVRGRTFDPWLRLIG"
BASE COUNT          681 a         1084 c         1078 g          704 t
ORIGIN      
        1 agcatcgcga tcaatctgag cttggagagg atcacctcgc tccggaaagt ctcgagccgc
       61 tttagcaggg tggcgccgcg cggctcggca gcgagcatcc gtcccacgct gtcttgcacg
      121 gagtgcgtgc cgcgaggtgc ggaataaacc cgtatcgagc cgccatggct tggaatcggc
      181 cgggcatgaa acacttcgag gtcatgcatc tccagcagat gcttcaggct cgccagcgaa
      241 tagtaacgca ggtgctcgtg atagatcgtg tcatactgaa gtttatcaag cagcgaaacg
      301 agataatgcg attccgagat gaagacgcca tccggcttga gcatttcgat gatgccgtca
      361 acgatcgcat ggacatcctc gatgtgggca aagcaattcg cggcggttac gacgcttgcc
      421 ggtccatgct cgcgcctcac ttcgcgcgcc acctcgacac caaaataccg ttttagcgtc
      481 ggaatgcctc gctcgttggc gatcgccaac atcggttggc tcaatgccga ccacacgttg
      541 gccgcccgct ttgaaattcg acagcagtgt tccatcgttg gagccgatat cgacgatcag
      601 gtccttgccg gtcagaccaa gcatgccggc gctctcgcgc tgcaagtcgg caaaattgtc
      661 ccgcaacaat ttcgtcgtgc cactggtgta cggatactca ggcggaaaga tgatggctgg
      721 atccaccgcg agcccgagct gaacaagctc gcagttgcgg caatgtagaa gcgtggtcgg
      781 aaaccagggc tgctgatggg gcgcctgccc gatcgggacc atttgattga ccggcggcat
      841 atacccaagc gacagaatcg tatcgagcgg tgcatgacca caaatctgac actgctcgac
      901 cggaacgctt gcgccggtgc cggcggcgcg cgcgactttg ctgggacgca agttaagcct
      961 ccttcggagc gagctcgatg ttgctccaat accagtcgag cgttggtttc aggccttcgc
     1021 cgagaaggac gcgcggctta tagcccagcc gcgcgagttt cgaaatatca gggcagcggc
     1081 gcgcggcgcc gccaggcatg gattttccgc tgatcagctc aatgtcacgg ccgcgaacgc
     1141 ctgctattcg gcgcgcaagg tcagcgatcg agatctcttc agccgttccg acatgataga
     1201 tacccagatg ctctcctttt tccagcatga gcatgacgcc tgcgacgaga tcgtcgataa
     1261 agcagaagct tcgcgtctcc ttgcccgttc cctgaatctg gaatttcagc gtgccggcag
     1321 ggtgcgacct ggcggcggcg tcgaggcgca gtgccagttg cgggataacg tgttcccaac
     1381 ccatgtcggg cccgtacaca ttgtgagggc gaaaaatcag gacacggtcg aaatacttgc
     1441 ggccgaagtt gatggccatc aattcgctga tcagtttgcc gccgccgtag gaataacggg
     1501 gattcagcgg gtcggggatc gtgagcggag cattctcgtc ggtcgggatt tgcgggggcg
     1561 tctgatagac ctccgaactc gatgcgaaca ccagcgtgcc gatgtcatgc ttgcgacagg
     1621 catcgatcac attgaccata ccgcgcacgc caacgtcgag aacgagatcc ggctggttgt
     1681 agaaaaactg cgtgccattc acgtaggcga ggtgatggac ttcatcaatg ctctgcgtcg
     1741 ctcgcgccac cgcgcctgaa tcgcgaatat cgccggcgat gaactcgata tcatcggcga
     1801 cgtctgcgag ccggctcgct tttccgcgcg aattgtcatc caggacgcgc acacggtggc
     1861 ctctcttgac cagcgctttc actagtcccg agcctatgaa gccgctgccg ccggtaacga
     1921 ggatgcggct cacactcgca tctcctcttt cgcagtttcg cgcgcgacat cgatccacct
     1981 gccgtgctga tgcgatcgtc gtgccgcatc gatgaattgc tgcacgcgat agccttcggc
     2041 aaagcccggg gtggcggtgc cgccgccttc gatggcgtcg aaaaatattt tcgccagccg
     2101 ggatacgggc gcgatgcgtc catcgggata tttcgcgtcg acaggatcgt cggtcgcgac
     2161 ccgaaccaga ggggcgtcgc gcccggcgtg ccacagctca aaaccgcgca tgtagtccgc
     2221 gcccgggtta tgcaggatca gtgtgccgtc ctcgccgaaa aactcgatgc gatgtccggt
     2281 gccgcgatac gatgcacagc tcatcgagag cgccaccaag gggcctgctg caaattgcag
     2341 agccatgccc accgtagttt ccagttcact gtcgccgggc aagccggaca cacgcgcgga
     2401 caggccctcg atcggtccac agaaccactc cagatagtgg aagcagtggg aaatgaaatt
     2461 ccccagtact ccgccgccat cgtcgcccac ggttttccag ttgcgcatgc gcatctggat
     2521 ggcgcggctt tcgacatgcc aatgcacggt gacgtggcgc agtgcgccga tcgcattggc
     2581 gtcgagcatg gccttggttc gctgccaggc gacgatctga tgaaaattga aatcgatcat
     2641 cgtcggcttg cggctcatgg aagcctgtct gaacatggcc cgcgctgtgc caagatcgct
     2701 cgcaagaggc ttttcggcga acacgggttt tccgagctgc agggcgtgaa ttgcgatctg
     2761 cgcctgcagg cttggcagcg tggcgatcgc gacaacctgc acgtccttgt cctcgaccag
     2821 cccacgccag tcgccatacg ccttcggcac gccggcggct ttcgcaagtt cggccgtgcg
     2881 cgcggaattg ctgccggcca gcgcaatcac ctcgcagcgt ggatcggcgc ggaacgcggg
     2941 cagctgcacg gttcgcccgt agttggtgcc cacaatgccg agacggatca cgatgcgacg
     3001 ccttgccaga ccggattttg ccttgcgcgg catggatttg agccaaatcg acatgctagg
     3061 caagtgcgaa ttgcacaccc cggacaacgc acgatgacag cagtgcagga ggacaacgtc
     3121 ggctcaggat ggcgcaagct gtttgcgctg cttccagtgg tgctcgcgat cggactgccg
     3181 atcaacaaca tttccgactg cgtactcctg gtcattctgg ccgtcgtcat ttgctgcggc
     3241 gaggtgagcg cgcgtccccg cgcgtgggcc gccgcagcgg cgattgtcgt cgcgggcgtc
     3301 ctggctcagg cactcctgtc gccgccacgc atcgaggagg gccataacgt ttttttgccg
     3361 agcccggccc tcgaacggct ggcgaccaac atggtggcct ggctgacagg gccgtctgcg
     3421 ctcgcgtggc acccctacgc tcctttagtg gtggcgctta tcgcgttgca tgctgtcgct
     3481 ctggccattg tcatctacgt caccgtccgg ggacggacat tcgacccctg gctgcggctg
     3541 atcggcg
//
LOCUS       DATDHO010000417         3358 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_366205, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000417 DATDHO010000000
VERSION     DATDHO010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3358
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366205"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..562
                     /locus_tag="VIY07_08125"
     CDS             <1..562
                     /locus_tag="VIY07_08125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEY6381756.1"
                     /translation="IDSATLMNKGLEIIEAHHLFSLSSDEIDVLVHPQSVVHGLVEFR
                     DGSVVAQLGSPDMRIPIAHCLAWPRRIDGPAARLDLAALHELTFEAPDLDRFPALALA
                     RRALETGGAAPTVLNAADEVAVGEFIAGRIGFPAIAALVEATLARAGAQGLLAEPAGI
                     DAALSVDHIARSLARDILPEIAVKAS"
     gene            618..1763
                     /gene="rseP"
                     /locus_tag="VIY07_08130"
     CDS             618..1763
                     /gene="rseP"
                     /locus_tag="VIY07_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEY6381757.1"
                     /translation="MEIMAGLTTFGSGLVGYIVPFLFVLTIVVFFHELGHFLMARWCG
                     IKVLVFSIGFGPEIAGFYDRHGTRWKISAIPLGGYVKFFGDENAASVPDSAAAATMTE
                     VEKRDSFQFQPLAARAAVVAAGPIANFLLAIAIFAGIFMTVGKQTTSARVDTIQPGSA
                     AQAAGFKPGDLVLTINGEKIESFSDMQRIVSISAGAPLVIEVERDNAQVTLKAVPQLK
                     ELKDNFGNVHRLGVLGISRSMSPGDIKTEKAGPMRAIVMGAQETWFVVDRTLSYIGGV
                     FTGREAADQLGGPIRIAQVSGQVATAGFAPLVHLTAVLSVSIGLLNLFPIPLLDGGHL
                     LFYAIELIRGRPLSERAQELGFRIGLAIVLMLMIFATFNDILHLATS"
     gene            1925..>3358
                     /gene="bamA"
                     /locus_tag="VIY07_08135"
     CDS             1925..>3358
                     /gene="bamA"
                     /locus_tag="VIY07_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEY6381758.1"
                     /translation="MGLCLGMVRGLAVGCLILGGILVGAGFVTVASSGAAVAQTVSSI
                     VVEGNRRVEADTVRSYFRPGPGGRIGPEQEDEALKALLATGLFSDVRISRSGGRIVVT
                     VVENPVINRVAFEGNKKAKDEQLSAEVQSKPRGTLSRPTVQADVQRIIEIYQRTGRFD
                     ISVTPKIIELPNNRVDLVFEIREGEKTGVKDLRFVGAQAFSHFRLKEVIKTSQSNWLS
                     FLQTTDIYDPDRVEADRDLLRRFYLKHGYADVRIVSAVGEYDPNIKGFIVTFTIDEGS
                     QYRVGTVEVLSNVRAIDPAVLRSQLKLSAGSVYNADLVEKSVEAMTIQAARQGYAFAN
                     VRPRGERNFEAKTINLAFVVEEGARAYIERINIRGNTRTRDYVIRREFDLGEGDAYNR
                     ALIDRAERRLKNLNYFKTVKITNEPGSAPDRVVINVDVEEQATGELSVSGGYSTADGF
                     IAEVSVADRNLMGRGNLGKASVTYGERV"
BASE COUNT          665 a          946 c         1037 g          710 t
ORIGIN      
        1 gatcgattca gcgacactca tgaacaaggg gctggagatc attgaggcac accatctgtt
       61 ctcgctcagt tcggatgaaa tagatgtgct ggtccatcca caatcggtgg tgcatggact
      121 cgtcgaattt cgtgacggct ccgtggtcgc gcagctcggg tcacccgaca tgcggattcc
      181 aatcgcccat tgtctggcat ggccccggcg gatcgatggt cccgctgcca gactggattt
      241 ggctgcattg catgagctca cctttgaggc tcctgacctg gaccggtttc ctgcactcgc
      301 tttggcgcgg cgcgccctgg aaacaggtgg ggctgcgccc actgtgctga atgccgcgga
      361 cgaggtcgcg gtgggtgaat tcattgcggg gcggattggc ttccccgcca tagcggcgct
      421 ggttgaggcg acgctggcaa gggctggcgc acaggggctt cttgcagaac cggctggaat
      481 tgatgccgct ttgtccgttg accatattgc aagaagtctg gcacgagaca tcttgcccga
      541 aattgccgta aaggcatcct aggtcagtca cgggcggcac gaaaaatcgg ctaaggcgag
      601 gcgaggcaga aatgggtatg gaaatcatgg cgggcttgac cacgttcgga agcggcctcg
      661 tcggctatat cgttccgttt ttgtttgttc tgaccatcgt cgtgtttttt cacgaacttg
      721 gtcatttcct gatggcgcgt tggtgcggca tcaaggtgct ggtgttttca atcgggttcg
      781 gtcccgagat agcgggcttc tacgaccgcc atggcacgcg ctggaagatt tcagccattc
      841 cgctcggcgg ctatgtgaaa tttttcggcg atgagaacgc agcgagtgtc ccagactcgg
      901 cggcggcagc caccatgacg gaagttgaaa aaagggacag cttccagttt caaccgcttg
      961 cagcacgcgc ggccgtcgta gccgccggtc cgattgcaaa cttcctcctg gcgatcgcga
     1021 tttttgccgg catattcatg accgtcggca agcagaccac gagcgcgcgc gtcgacacaa
     1081 tccagcctgg cagcgccgcc caggcagccg gcttcaagcc cggcgacctg gttctgacga
     1141 tcaacggcga gaagattgaa agcttctccg acatgcagcg catcgtcagc atcagcgcag
     1201 gtgcaccgct ggtcatcgag gtcgagcgcg acaatgcgca ggtcacgctc aaggctgtgc
     1261 cgcaactcaa ggaactgaag gacaatttcg gcaacgttca ccggctgggc gtgctcggca
     1321 tcagccgttc gatgtcgccc ggcgatatca agaccgaaaa ggcggggccg atgcgcgcca
     1381 tcgtcatggg cgcacaggaa acctggttcg tggtcgaccg gacgctctcc tacattggag
     1441 gcgtgttcac ggggcgggag gcagccgatc agctcggcgg accgattcgg atagcgcagg
     1501 tatcagggca ggttgctact gccggattcg cgccgctggt tcacctcacg gccgtcctgt
     1561 cggtatcgat cggactgcta aacctctttc caataccgct gctcgatggg ggtcaccttt
     1621 tgttctacgc cattgagttg ataagaggac ggcccttgtc ggaacgggcg caggaactcg
     1681 gattcaggat cggattggcg atcgtcctga tgttgatgat tttcgcaacc tttaatgaca
     1741 ttctccactt ggccacttcc tgaccgttgc tgacgggcaa ctttttgagg gaaaagggaa
     1801 agtttcggcc ggacttcgtt tgcagcgtgt aaaaaacgct gtaaaaagct cgcctatgcc
     1861 agcccggacc gtctgtcgaa tccgcagtgg gggcggccgc atggatcaaa agggcgcgta
     1921 gcgaatggga ctttgtttgg ggatggttcg gggactggct gttggctgcc tgatcctcgg
     1981 cggtatcctt gtcggcgctg gcttcgtgac agttgcctcg tcgggcgctg cggtcgcgca
     2041 gacggtcagt tcgatcgtcg tcgagggtaa ccgccgggtc gaggccgaca ccgttcgttc
     2101 gtatttccgg cccggcccgg gcggtcgaat aggtcccgag caggaagacg aagccctcaa
     2161 ggccctcctt gccaccggtc tcttttccga cgtgcgtatc agccgcagcg gcgggcggat
     2221 cgtcgtcacg gtggttgaga accccgtgat caaccgagtc gccttcgagg gcaataagaa
     2281 ggccaaggac gagcagcttt cggcggaagt tcagtcgaag ccacgcggga ccctgtcacg
     2341 gccgacggtc caggccgacg tgcagcgcat cattgagatc tatcaacgca ccggccgctt
     2401 cgatatctcg gttaccccga agatcatcga gttgccgaac aaccgcgtcg atctcgtttt
     2461 tgaaatccgg gaaggcgaaa agaccggcgt taaagacctc cgtttcgtag gtgcccaggc
     2521 attttcgcac ttccgcctga aggaggtgat caagacctcc caaagcaatt ggctcagctt
     2581 tcttcagacc acggacattt atgatcccga tcgcgtcgag gctgaccgcg atctgttgcg
     2641 ccgcttctat ctgaagcatg gctacgccga cgtgcgcatt gtctcggccg ttggcgagta
     2701 tgacccgaac atcaagggtt tcatcgttac cttcacgatc gacgagggca gccaatatcg
     2761 tgtcggcaca gttgaagttc tttcgaacgt gcgcgcgatc gatccggcgg tattgcgcag
     2821 ccaactcaag ttgagcgccg gcagcgtcta taacgcggac ctcgtggaaa aaagcgtcga
     2881 agcgatgacc attcaggctg cgcggcaggg ctacgcattc gcgaacgtcc ggcctcgtgg
     2941 tgagcgcaac ttcgaggcaa aaaccataaa tcttgcgttc gtcgtcgagg aaggcgcgcg
     3001 tgcctacatc gagcgcatca atatccgggg caatacgcgc acccgcgact atgtcattcg
     3061 gcgcgaattc gaccttggcg aaggggatgc atacaaccgg gcgctgatcg atcgtgccga
     3121 gcgacgcctg aaaaacctta actacttcaa gaccgtcaag atcaccaatg agcctggttc
     3181 ggcgccggac cgcgtggtca tcaatgtgga tgttgaagag caggccaccg gcgaattatc
     3241 ggtgtcgggc ggctattcga ctgccgatgg cttcattgcc gaagtcagcg tcgcagatcg
     3301 caacctgatg ggccgcggca acttggggaa ggcatctgtt acctacggcg agcgtgtt
//
LOCUS       DATDHO010000418         5774 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_20082, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000418 DATDHO010000000
VERSION     DATDHO010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5774)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5774)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5774
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20082"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(130..363)
                     /locus_tag="VIY07_08140"
     CDS             complement(130..363)
                     /locus_tag="VIY07_08140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381759.1"
                     /translation="MISRNAKFLSAIAIALIATVAVARTIHTHVAPSGAHVTSGKVIG
                     TTPPQMSPHREGTIVCGMALDANCEKLENLLPM"
     gene            598..1410
                     /locus_tag="VIY07_08145"
     CDS             598..1410
                     /locus_tag="VIY07_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6381760.1"
                     /translation="MPFYICTACGTQYPESARPPEQCVICEEERQYVPPRGQTWTTLG
                     ELSQSHMNSFHEYDTGLIGISAGFAIGQRALLVRTENGNILWDCVSTLDAATVSMIKG
                     LGGLKAIAISHPHFYTTMNEWADAFGCQIHLNAADQDWIMRKGEAVKLWDGDTLKLWD
                     GVTLVRCGGHFPGGTVMHWAGGAGGRGIVCAGDILTVATDRKWLSFMRSYPNFIPLSA
                     REVEHIGEALAPFKFDIIYGHYFDRVIAKDAKRVLEKSVARYVAAINGTRGY"
     gene            complement(1780..2490)
                     /locus_tag="VIY07_08150"
     CDS             complement(1780..2490)
                     /locus_tag="VIY07_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell cycle transcriptional regulator TrcR"
                     /protein_id="HEY6381761.1"
                     /translation="MATAAPLMPKATAVWLLDNTALSFDQIAEFCKLHPLEVKAIADG
                     DAAQGIKGLDPILTGQLTREQIADAEKNPEARLKLTEPKVSVPTSERSKKGPRYTPVS
                     RRQDRPNAILWLVRNHPELKDSAIMRLVGTTKSTIASIRDRTHWNSANLTPMDPVTLG
                     LASQIDLDFEVQRANKEKPVPVDTGATLLPAAETTARKETEIATKVEPEKKPGELDVN
                     AVFAKLKQLGGKSEKDGE"
     gene            2682..3656
                     /gene="ispH"
                     /locus_tag="VIY07_08155"
                     /gene_synonym="lytB"
     CDS             2682..3656
                     /gene="ispH"
                     /locus_tag="VIY07_08155"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEY6381762.1"
                     /translation="MRSSSPKPVLKVLLCSPRGFCAGVVRAIESVERALAIYGAPVYV
                     RHEIVHNRYVVEGLRAKGAIFVEELSEVPDDHAPVIFSAHGVARAIPEEARRRNLFTI
                     DATCPLVTKVHREAEIHNRRGREIVLIGHAGHPEVVGTMGQLPAGSITLLETLEDVQN
                     FHPRDANRLAYVTQTTLSVDDTAAMVDLLKQRFPDIAGPHKEDICYATTNRQEAVKRV
                     APVVDAMIVVGAPNSSNSQRLKEVAEKSGCPRAFLMQSAADVNWSDFTNVTCLGITAG
                     ASAPEVLVEEIMGAFAERYTLDIATVTATEEGVFFPLPRPLRPHEAAE"
     gene            3663..4628
                     /locus_tag="VIY07_08160"
     CDS             3663..4628
                     /locus_tag="VIY07_08160"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEY6381763.1"
                     /translation="MAVYTDVSAEDLTRFLAAYDIGELLAYKGIAEGVENSNFLVHTG
                     TGNFILTLYEKRVAEDDLPFFLGLMEHLAARGITCPQPVKNKRGGLLGKIAGRPAAIV
                     TFLDGLWIRRPSPNHCAAVGEALARLHLAGADFRPRRKNALSIESWRPLYEHAKERGD
                     SVRQGLCAEIATELEVLEKSWPRQLPQGVIHADLFPDNVFFLGDKVSGLIDFYFACTD
                     TLAYDIAICLNAWCFEADHSYNVTKGRSLLGAYGKVRALSGAERAALPVLARGAAMRF
                     LLTRLVDWLAVPDGAFVRPKDPLEYYRKLRFHQSVKTVQDYGLGT"
     gene            4683..5153
                     /gene="rnhA"
                     /locus_tag="VIY07_08165"
     CDS             4683..5153
                     /gene="rnhA"
                     /locus_tag="VIY07_08165"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEY6381764.1"
                     /translation="MSEQRVTIHTDGACSGNPGPGGWGAILTFGDHEKELKGGDPHTT
                     NNRMELMAAISALEALKRPCAVDLHTDSEYLKNGITGWIHGWKKNGWRTADKKPVKNV
                     DLWKRLDEALAHHRVHWHWVKGHAGHAMNERADILAREGLVAARAGALGAMKTK"
     gene            complement(5262..5747)
                     /locus_tag="VIY07_08170"
     CDS             complement(5262..5747)
                     /locus_tag="VIY07_08170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY6381765.1"
                     /translation="MPIKVGERLPDAKFRVMSSEGPVWKTTDEVFKGRKVALFAVPGA
                     FTPTCNNLHIPSFLNNVDAIKAKGVHTIAVTGVNDVFVMEAWKKSTGADGKIDFLADG
                     NGEFAKAVDMAFDGSGHGLGTRSKRYSMLVEDGVVKKLNIEDAPGKCEISGGQTLLAQ
                     L"
BASE COUNT         1150 a         1626 c         1760 g         1238 t
ORIGIN      
        1 gttttcaggg ggcgcggaac ttatccgcgg gggcgttcac atgcttgatc gcgagcttta
       61 cgcgagcctt aattttcttg gagattctct ggagaattct tggcgggcgc cagtcgacct
      121 gtgaagctct tacatcggca acaggttctc gagcttttcg cagttcgcat cgagcgccat
      181 gccgcaaacg atggttccct cgcggtgagg agacatttgg ggcggagtag tacctatcac
      241 cttgccgctg gtgacgtgtg cgccagacgg cgcgacgtgg gtgtggatcg tgcgggcgac
      301 ggcaaccgtg gcaatcagag ctattgcgat tgccgacaag aatttcgcgt ttcttgagat
      361 cattggacca cccgatagtt tcattcgtta cacgatcgag ataactcagt ttttgctctg
      421 cacaagacac atgttcctca cattaatttg taaagcttcg taatcactta acggaatatt
      481 gctgcgcaca aatagtgatg gttcgcgcgc gatgcctggt gcaggaaatg ttagtagact
      541 tggtcgccgg caatgatgct cgttcaaata ccctgacaaa ctaaccacaa ggatctcatg
      601 cccttttaca tctgcaccgc ctgcggcacg cagtacccgg agagcgcgcg cccacccgag
      661 caatgcgtga tctgtgagga agagcggcag tacgtgccgc cacgggggca gacctggacg
      721 acgctcggcg aattgtcgca gagccacatg aacagtttcc atgaatacga caccggcttg
      781 atcggtatca gcgccggctt cgcgattggc cagcgcgcgc tcctggtccg cactgaaaac
      841 ggcaacatac tgtgggactg cgtttcgacg ctcgatgcgg cgaccgtcag catgatcaag
      901 ggcctcggtg gcctgaaagc gattgcgatc tcgcacccgc atttttacac gacgatgaac
      961 gaatgggccg acgcattcgg gtgtcagatc catctcaacg ccgccgacca ggactggatc
     1021 atgcgcaaag gcgaggcggt gaaattgtgg gatggtgaca cgctcaagct atgggatggc
     1081 gtgacgctgg ttcgctgtgg cggacatttc cccgggggca ccgtaatgca ctgggcgggc
     1141 ggagccggcg ggcgaggcat cgtttgcgcg ggcgacatcc tgaccgtcgc caccgacaga
     1201 aagtggctct ccttcatgcg cagctacccg aacttcattc cgctatcggc gcgcgaggtg
     1261 gagcacattg gcgaggctct ggcgccattc aagttcgaca ttatttacgg ccattatttt
     1321 gatcgcgtga ttgccaagga cgccaaacgg gtcttggaga agtctgttgc gcgttacgtg
     1381 gccgcgatca atggcacaag aggatattga gagacgcatc aaaaaaaaca aaccggccgc
     1441 gcaagtgccg ggtggggacg cggcagtttg cgcggccgtg ctgagtgcgc ccagaatgga
     1501 gcgcaacatc acagccacaa gtcgagccta ttgttcgttg attggatggc gctcgatgtc
     1561 acccaacgtt cgcgattgtc ggcctcacgc gtgaatggga acttaattta ctaattgcaa
     1621 tggtgcttat ccggaaccgg attgcgattt cccacgcaat atgctgatag ccgcgcgatc
     1681 acaaaattgc gatccgggtg cgaggtgcca taccgcatta cccgctcgcc ggcggggccg
     1741 accattgatt aggagttatc gcaatagcag cgaaaatttt tattcgccgt ccttttcgct
     1801 cttgccgccg agttgcttca gcttcgcgaa gacggcgttg acgtcgagct cgcccggctt
     1861 tttctcgggc tccactttgg tggcaatttc ggtttccttg cgcgcagtgg tctcggcggc
     1921 aggcagcagt gttgccccgg tatcaacggg cacgggcttt tccttattgg cgcgctgcac
     1981 ttcgaaatcg agatcgatct gcgaggcgag accaagtgtc acagggtcca ttggcgtcag
     2041 attcgccgaa ttccagtgcg tgcgatctcg gattgaggcg atcgtcgact tggtggttcc
     2101 caccagccgc atgatcgcgc tgtctttgag ttccggatgg ttgcgcacca gccacagaat
     2161 ggcgtttggc cggtcctgac ggcgcgacac tggcgtgtag cgcgggcctt tcttgctgcg
     2221 ttcggaggtc ggaacagaga ctttcggctc ggtcagcttc agacgggctt cggggttttt
     2281 ctccgcatcg gcgatctgct cgcgcgtcag ttgtcccgtc aggatgggat cgaggccttt
     2341 gatcccctgt gctgcatcgc catcggcgat cgccttcacc tccagcgggt gcaacttgca
     2401 gaactcggcg atctggtcga acgacagcgc ggtgttgtcc agcagccaga cggcggtcgc
     2461 cttcggcatc aagggtgctg cggtcgccat ggcaaaatct cctctatgct ccgcccgccc
     2521 ctgggcgaag ctttggatca tctatgatga tcggaaaaag taggtggaat ataggggcag
     2581 cgtcgggggc atgcaaccgg cacgcttgac atggtagggc ggggcgtccc atgtccatgc
     2641 cggaaatgcg cgccaaattt gcgcgctttc gaggtccaaa catgagatca agctcgccca
     2701 agccagtcct gaaggtcctg ctctgttcgc cccggggctt ttgcgccggc gtggtgcgcg
     2761 ccattgaatc cgtggaacgg gccttggcga tctacggagc gccggtctat gtgcgccatg
     2821 aaatcgtgca taaccggtac gtggtggaag gtcttcgggc caagggcgca atttttgtcg
     2881 aggagctaag cgaagttccc gatgaccacg cgccggtgat cttttccgcc catggcgtcg
     2941 cgcgtgcgat ccccgaggag gcccggcggc gcaacctgtt cacgatcgat gcgacttgtc
     3001 cgctcgtgac caaagtgcat cgcgaggccg aaatccacaa tcgccgcggg cgtgaaattg
     3061 tgctcattgg gcacgcgggc catccggaag tcgtcgggac catgggccag ttgcctgccg
     3121 gcagcatcac gctgttggag acgcttgagg atgttcaaaa ttttcatccg cgcgacgcca
     3181 accggctggc ttatgtgacg caaaccacgt tgtcggtcga tgatacggcg gcgatggtcg
     3241 atcttttgaa acagcgcttt ccggatattg cgggcccgca caaggaggac atctgctacg
     3301 caacaacaaa tcgccaggag gcggtgaagc gagttgcgcc tgtcgtcgac gccatgatcg
     3361 ttgtcggcgc gccaaattca tcgaactcgc agcgcctcaa ggaagtggcg gagaaatcgg
     3421 gctgtcctcg ggcatttctc atgcagtccg ccgccgatgt taattggagc gatttcacga
     3481 acgtgacttg cctcggcatc actgccggcg cttcggcgcc cgaagtgctg gtcgaggaaa
     3541 ttatgggggc cttcgccgaa cgttacacgc tcgacatcgc gaccgtcacg gcgacggagg
     3601 agggggtgtt ttttccgttg cctcgtccac tgcgacccca cgaggcggcg gagtgagcct
     3661 gtatggccgt ctataccgac gtttcggcgg aagatctcac ccgctttctg gccgcttatg
     3721 acatcggcga actgctcgcc tacaagggca tcgcggaagg cgtcgagaac tcgaattttc
     3781 tggtgcacac aggcaccggc aatttcattc tgacgttgta tgaaaagcgg gtcgccgaag
     3841 acgatctgcc attttttctg ggcctgatgg agcatctggc ggctcgcggc atcacctgtc
     3901 cgcagccggt aaagaacaag cgcggcggct tgcttggcaa gatcgccggc cggccggccg
     3961 cgatcgtcac atttcttgac ggattgtgga ttcggcggcc aagtccgaac cattgcgcgg
     4021 ccgttggcga ggcactggcg cgcctgcatc tcgcgggggc tgacttcagg ccgaggcgaa
     4081 aaaatgcgct atcaatcgag agctggcggc cactgtatga acatgcgaag gagcgaggcg
     4141 acagtgtaag gcagggactt tgcgccgaga tagcaacaga gctcgaagtg ctggagaaat
     4201 cctggccgcg acagcttccg caaggcgtaa tccatgccga tctttttccg gacaatgtgt
     4261 tctttctcgg cgacaaggta tccgggctga ttgatttcta ctttgcgtgt accgacacgc
     4321 tggcctacga catcgcgatt tgcctcaacg cgtggtgctt cgaagccgac cattcctata
     4381 acgtaaccaa ggggcgctcg ctgcttggcg cgtacggtaa agttcgcgct ctttcgggcg
     4441 ccgagcgagc cgcgcttcca gtgctcgcgc gcggcgcggc catgcgcttc ctgctgacaa
     4501 ggctggtcga ttggctggcg gtgccggatg gtgcgttcgt tcgtccgaaa gatccgctgg
     4561 aatattaccg gaagctgcgc tttcaccagt cggtcaaaac cgtacaggat tatgggctgg
     4621 gcacatgacg ccgaacgaaa aaaggggatt gcggaaaaaa tgatgcgcat aggaccattc
     4681 gcgtgagcga gcagcgcgtc accattcaca ctgatggcgc ctgctccggc aatcccgggc
     4741 cgggcggttg gggtgcgatc ctcactttcg gcgaccacga aaaggaactt aaaggcggcg
     4801 acccacatac gaccaataat cgtatggaat tgatggcggc gatttcggcg ttggaggctc
     4861 ttaaacgtcc ttgtgcagtc gatctgcata cggatagcga atacctcaag aacggcatca
     4921 ccggatggat tcacgggtgg aagaaaaatg gctggcgtac cgcagacaag aagcccgtta
     4981 aaaacgtcga cttgtggaag cgcctcgatg aagcgttagc gcatcacagg gtgcactggc
     5041 attgggtcaa aggccatgcc ggccatgcca tgaacgagcg ggctgacata cttgcgcggg
     5101 aaggtcttgt ggccgcacga gccggcgccc tcggcgccat gaagaccaaa tagccattcc
     5161 ggggcgcggc ttgagctcgc gaacccggaa tgcggatgtc acttcagcag ttgcgtccgg
     5221 attccggtcc tcccacttca gcggacagaa atggccattc actacagctg cgccagcagc
     5281 gtctggccgc ccgaaatctc acattttcct ggggcgtcct cgatgttaag ttttttgacc
     5341 acgccatcct caaccagcat cgaatagcgc ttcgagcgtg tcccgagccc gtggccggat
     5401 ccgtcaaaag ccatgtcgac cgccttggca aattcgccat tcccgtcggc gagaaaatcg
     5461 atcttgccgt cggcgccggt cgatttcttc caggcttcca tgacaaacac gtcattgacg
     5521 cccgtcaccg cgatcgtgtg cacacccttg gccttgatgg cgtcgacgtt gttcagaaaa
     5581 cttggaatgt gcaggttatt gcaggtcggc gtgaaggcgc cgggcaccgc gaacagcgcc
     5641 acctttcggc ctttgaaaac ctcgtcagtg gtcttccaga cggggccttc gctgctcatg
     5701 acgcggaatt tggcatcagg caatcgttcg ccgaccttga taggcatggg tgtcctctcg
     5761 cgttgcggaa atcc
//
LOCUS       DATDHO010000419         2207 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_416304, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000419 DATDHO010000000
VERSION     DATDHO010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416304"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..322)
                     /locus_tag="VIY07_08175"
     CDS             complement(<1..322)
                     /locus_tag="VIY07_08175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hybrid sensor histidine kinase/response
                     regulator"
                     /protein_id="HEY6381766.1"
                     /translation="MRARRDAALRLLKTMLVASIVIPVAIFCYASWLNYRSAFEHADE
                     ELKASLNILSQHASGIFQSVELAFTAADAIIGDLTEEQIKASEQTLHSQLNKIEKSTT
                     AIDAI"
     gene            737..1846
                     /locus_tag="VIY07_08180"
     CDS             737..1846
                     /locus_tag="VIY07_08180"
                     /inference="COORDINATES: protein motif:HMM:NF015298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEY6381767.1"
                     /translation="MPARASSRKRQKQPHSWIAQCARAAATLLVALVMLPGMISDVED
                     HQSLPLSISAIPDPDPKVFILAITESESSTITGAADTSTEDGQLHSHSREACLLEATL
                     ALSLVELPSPPINLIPLLTMSSSGPEMLDNVVALLPSSSGADLISYAGRKRASDFGYA
                     YRDLVKRAAISGLQRIQDEAAFTRATIMGAASTYNPFRGGKEEGGPQTASGELYDPLA
                     WTAAIKTELRNRFRGVRYGRLYQPTFALVQSVDKQLIVKINDVGPLRPGRVLDLNERS
                     MRHLDPFLAKGVIRDVRITPLPGEDWTPGPVGVAYAIDLHNHGWRTASAHANPFETAS
                     RPADPKPTSLDVPVVHIPDSFAEQALRAVTPSSGG"
     gene            complement(1850..>2207)
                     /locus_tag="VIY07_08185"
     CDS             complement(1850..>2207)
                     /locus_tag="VIY07_08185"
                     /inference="COORDINATES: protein motif:HMM:NF014168.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY6381768.1"
                     /translation="WIFIRSGWGKIFDIPAYAATFPARGLPPFLAYIAVPAEFFGGIA
                     LILGLATRYVVLVMIVFMLVATFSSHRYWEFTDAAVRRAQDASFYKNMAMLGGFLFLF
                     VVGSGRLSIDAWLRKR"
BASE COUNT          512 a          628 c          606 g          461 t
ORIGIN      
        1 aaatggcatc gatagcggtt gtcgatttct cgatcttgtt cagttgtgaa tgcagcgtct
       61 gttcggacgc cttgatttgt tcctccgtga ggtccccgat aatggcgtcg gcggcggtaa
      121 aggccagctc gacggactgg aaaatgccgg atgcatgctg ggacaggata ttcagcgacg
      181 ccttgagctc ttcgtcggca tgctcaaaag cacttcgata gttgagccag ctcgcataac
      241 aaaaaatcgc caccgggatg acgattgacg ccaccaacat tgttttgagg aggcgtagag
      301 cggcatcacg gcgcgcgcgc attcgacaaa actcgtcagg tagagacttg aatgtattca
      361 ggatacttaa cggtgggaag ggaaaaagcc cgataattca cgttgacgca tttatcttcc
      421 ggttgtggac agtgggttcc gcagagcgga cggcgaatct tcaatcaaat accggggatt
      481 gcaagaccga tcttcgctcg atagtgaacc gggcagacgc gttgagtcac tgccgtctat
      541 caatttaagt acctgaagct caaccgcgat gctcgacgac attcagagaa tgcgcgcaca
      601 catcgtcagc atttagatca aagtcgacga ttttttgaat caaacttgat gattgttttc
      661 cttcacaatt tcaccggcgc ttcagcgggc ggccctaagg attgcgttcg aaggcagttc
      721 agttgcgacg gtgttgatgc ccgcacgagc gtcgtctcgc aagcgtcaaa aacaaccgca
      781 ctcctggatc gcgcaatgcg ccagggcagc ggctactctc cttgttgctc tcgtcatgtt
      841 gcccgggatg atctccgacg ttgaggatca tcaatccttg ccattgtcga tatcagcaat
      901 tcccgacccc gatcccaaag ttttcatcct ggcaatcacc gagagtgaat cttcgacgat
      961 caccggggcc gccgacacct ccacagaaga tgggcagctg cactcacact cccgtgaagc
     1021 atgcctgctc gaggccacgt tggccctgtc gcttgtcgaa ttgccatctc cgcctatcaa
     1081 tttgattcct ctcctgacga tgtcttcgtc tggaccggag atgttggaca acgttgtcgc
     1141 cctgctcccc agctcaagcg gcgcggatct gatttcctat gccggacgca aacgggcatc
     1201 ggactttggt tatgcctatc gagatctggt aaagcgcgcc gcgatatccg gcctgcaacg
     1261 catccaagat gaggcggcat tcacgcgcgc gacgatcatg ggtgccgcgt caacgtacaa
     1321 tcctttccgc ggtggcaaag aagaaggtgg tccgcagacc gcttcgggcg aactctacga
     1381 cccgttggcg tggacggcgg cgataaaaac tgagctgcgc aatcggtttc gtggcgttcg
     1441 ctatggcaga ctctaccaac cgacatttgc gctggtgcaa agcgtcgaca agcagctgat
     1501 cgtcaagatc aatgacgttg gaccactccg gcccggccgg gtgctagacc tgaacgagcg
     1561 cagcatgcgg catcttgatc cgttcctggc aaagggtgtc attcgggatg tcagaattac
     1621 gcccttgccg ggagaagact ggacgccagg cccggttgga gttgcgtacg ccattgatct
     1681 ccacaatcac ggatggcgca ctgcgtcggc gcacgccaac ccattcgaaa cggcaagccg
     1741 gcccgcagat ccgaagccca cgtcgctgga tgtgccggtg gtgcacatcc cggactcttt
     1801 tgccgaacaa gcgctcaggg ccgttacgcc aagcagcggc ggatagtcgt taacgtttgc
     1861 gcagccaggc gtcgatgctc aagcggcctg agccgacaac gaataagaac aggaatcccc
     1921 ctaacatcgc catgttctta tagaagcttg cgtcctgcgc ccgacgcacc gctgcatcag
     1981 tgaattccca gtaccggtgc gagctgaaag tcgcgaccag cataaacaca atcatcacca
     2041 acacgacata tcgcgtcgca aggccgagga tcaaagcaat gccgccgaaa aattccgccg
     2101 ggacagcgat ataggccaaa aacggcggta gaccgcgagc cgggaaagtc gccgcgtagg
     2161 ctggaatgtc aaaaattttt ccccagccac tgcggataaa aatccag
//
LOCUS       DATDHO010000420         1916 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_416308, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000420 DATDHO010000000
VERSION     DATDHO010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416308"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1113..>1916
                     /locus_tag="VIY07_08190"
     CDS             1113..>1916
                     /locus_tag="VIY07_08190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381769.1"
                     /translation="MFAIGLLFLRMLCDCFKSPQRLEAEILVLRHQLNVLQQRTPRHQ
                     LRLRWVDRALFIWLYRRCPRILNVITIVKPETVLYWHRRGFAAYWRWKSRSPGGRPRI
                     AQEVRDLIRRMSLENPLWGATKMQGELLKLGIRVAQSTVSIYMVPRRDRPLQTWKTFI
                     HNHAEGIASVDLFVVPTIAFQQLFACLVLGHQRRQLLWFAVTRNPTAEWLARQITEAF
                     PWDTAPKYLIRDNDRAFGAAFRARVQAMGIRDRPTSLRSPWQNGHVERVI"
BASE COUNT          344 a          551 c          592 g          429 t
ORIGIN      
        1 aacagttcaa cgcggccgtg cgggagtttt tgaagccgca gtcatgactt tccgttatag
       61 ttgctccagt tcgctcgcgt gctcgcgccg agaaagccaa tggtcggcca cctgtcattc
      121 ccgaaaattc catccgcacg ggttggcgcc atgagagcga atcggcacat catccgtcgc
      181 gatgctggct atcctctatc tgattgggac gtttgtcgcc gacctgttta agtcgcgccg
      241 gcgacttgag gccgagaacc tgtttcttcg ccatcaattg aatgtcattc tgcgacgcgc
      301 accgcatggc cggcggctac gtaggagtga ccgagcactg ttggtttgga tgacctggct
      361 gtgtccaagc ctgattaatt taacccgggt cgtgcagccc gacacaatcc tgcggtggca
      421 tcgagcagga tttcgagcct actggcgttg gaggtctcgc tgtcgaccgg gccggcccag
      481 gattggccgc gagctgcgcg aacttgtcca acggatgagc agggagaacc cgctctgggg
      541 cgccccgcgt atccatgggg agctgctgaa gctcgggttc gagatcgccg agtcgacggt
      601 ctccaaatac atgattaggc accgagggcc gccatcgcaa acctggcgga cgttcctgcg
      661 caatcatgcc catgccatcg cgggagtgac ttctgcgtgg tgccaaccct gacatttgaa
      721 cggctgtttg cgtttcttgt catgggtcac ggtcggcgtc agctgctctg gttcgcggtg
      781 actcggcacc caacagcgga gtggctggca caacagattg tcgaagcatt tccgtggggc
      841 ccggcgccca gcttccttat ccgagacaat gatggctctt atgggcagat cttcacgaac
      901 cggctgcggg cgatgggaat tcgggatcgg ccgatatcgc cgagatcgcc ctggcagaac
      961 gcgtacgtgg agcgtctgat cgggacgctg cggagcgact gtctggatca tgtgctaatc
     1021 tttggcgaac agcatttacg gcgggttgtc gcttccgaaa actccgtcca tttgactcgt
     1081 cggctggtgg cgaatcagaa catgatcgcc gaatgttcgc aatcggcctc ttatttctcc
     1141 gcatgctgtg cgattgtttc aagtcgccac agcggctaga agccgaaatc ctggtcctgc
     1201 gccatcagtt aaatgttctg cagcagcgaa ccccgcgtca tcagctgcgt ctgcggtggg
     1261 tcgaccgggc tttgttcatc tggctctatc ggcgctgccc gcgcatcctt aacgtcatca
     1321 ccatcgtcaa gcccgagacg gtattgtact ggcatcgcag gggttttgcc gcttactggc
     1381 gctggaaatc ccggtcgccg ggaggccgcc cgcgcatcgc ccaagaggtg cgcgacctga
     1441 tccgcagaat gagccttgag aacccgctgt ggggcgccac caagatgcaa ggcgaattgc
     1501 tcaagctcgg catccgggtc gcccagtcga cggtttcgat ctacatggtg ccgcggcggg
     1561 accggccgtt gcagacctgg aagaccttta ttcacaatca tgccgagggc attgcgtcgg
     1621 tggacctgtt cgttgtgccg acgattgcgt ttcagcagct ctttgcatgt cttgttcttg
     1681 gtcaccaacg ccggcagttg ttgtggtttg cggtgacccg taatccgaca gccgagtggt
     1741 tggcgcggca gatcacggag gcgtttccgt gggacacggc gccgaaatat ctcattcgcg
     1801 acaatgaccg agcgtttggt gccgcgttca gggctcgcgt gcaagcgatg ggtatccggg
     1861 atagaccgac gtcgttgcgg tcaccctggc agaacgggca tgttgagcgc gtgatc
//
LOCUS       DATDHO010000421         3243 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_168558, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000421 DATDHO010000000
VERSION     DATDHO010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3243
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168558"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /locus_tag="VIY07_08195"
     CDS             complement(<1..619)
                     /locus_tag="VIY07_08195"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381770.1"
                     /translation="MSALLSVSGVTKRFRGLVAVDALSLAVPKGEIFAVIGPNGAGKT
                     TLFNMIAGVFSPDGGTIAFAGERIDGLSSDQVCRRGIGRTFQIVRPFPALSVEDNVII
                     GALLHRRQVHDARERALEILRRLDLHDKRAQRASSLTLPDRKRLEVARALATEPNLLL
                     LDEVMAGLRPTETDRMVGILKQLNQETGLTILLIEHVMRAVMALAN"
     gene            complement(616..1620)
                     /locus_tag="VIY07_08200"
     CDS             complement(616..1620)
                     /locus_tag="VIY07_08200"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381771.1"
                     /translation="MITRWTAGATPRGLVLLAILLIAALIAPFFASDYLLTVLILILY
                     FAYTGQAWNIMMGFAGQLSLGHALYVGLGAYAAAALYVHFGIGPWLGLLAAVPIAAAT
                     GAFIGYLAFRFRVGGVYFAILTIAFAEFARVGFDHLAWTRGSSGLFLPVAQYSHNDLW
                     QLRGHPVMFYYILLAATVLAFIGCRALLHSRIGYFWLAIREDEEAARAVGIDTFRYKM
                     IAVVISSGMTAFAGVIYAFYYNNLFPEQVFNISRSIDIILGPLVGGIGTLFGPIVGTF
                     ILEGLSEGLRTLLEILGVDVPGIKQVFFGVVLLLVVVALPEGVWPWLARRFGLTERKQ
                     "
     gene            complement(1617..2489)
                     /locus_tag="VIY07_08205"
     CDS             complement(1617..2489)
                     /locus_tag="VIY07_08205"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381772.1"
                     /translation="MPVDVYLNVAVGGILTGLVYGLMALGLSVIFGVVRVVNFAHGEM
                     MTIAMYIAVTLFSAFRLDPLVMLVPIAAVLFACGYVLQAGLINRFITRPEHSQFLLLV
                     AIAIIITNALLILFGPDSQNVQAAYAYDSFQVGPLIVDATKLYAGLTAVVVTTGLFAF
                     FRFTRLGTAIRACADNYTGAMVVGLDVRRLYALTFGIGAACVGAAGCMLLLIFDVTPA
                     VGPAYTLLAFVIVITGGLGSMPGALIGGVLIGLTEALAGLVFTPSAKSMFAFAILVLV
                     LLFRPQGIMGKRAA"
     gene            complement(2616..>3243)
                     /locus_tag="VIY07_08210"
     CDS             complement(2616..>3243)
                     /locus_tag="VIY07_08210"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381773.1"
                     /translation="NMPYNLVETIAYDPAARDLSVEVAKAKATGADALLMVSRLNDAI
                     LLTRELVKQRWSPMAILSMGPGWYEDQYLKTLGKLSDGPLSFVPWYDPNKPLSKTLEA
                     ALAKAHPGINLNTNHVYTFEALLVTADAYKRAGSADPKALADAVRSTNFTNNGSPGPG
                     IQFNEKGQNDKLKNSAIQNRDGKLLTVAPKVAANAKVEWPLKPYDKRS"
BASE COUNT          731 a          995 c          974 g          543 t
ORIGIN      
        1 gattggcgag cgccatgacg gcacgcatga catgctcgat cagcaggatc gtcagtcccg
       61 tctcctgatt gagctgcttc aggattccaa ccatgcggtc ggtctcggtc ggcctcaacc
      121 cggccatcac ctcgtcgagg agaaggagat ttggttcggt tgcgagcgca cgggctacct
      181 ccagccgctt gcggtcggga agcgtcagcg aggacgcgcg ttgcgcccgc ttgtcgtgga
      241 gatcgaggcg gcggaggatc tcgagcgcgc gttcgcgcgc gtcgtgcacc tgccgccgat
      301 gcagcagcgc gccgatgatc acgttgtcct cgacgctgag cgccgggaat ggcctgacaa
      361 tctggaaagt acggccgatg ccgcggcggc aaacctgatc cgatgagagt ccatcgatgc
      421 gctcgccggc gaacgcgatc gtcccgccgt cgggggaaaa caccccggca atcatgttga
      481 aaagcgtggt cttgccggca ccattcggcc cgataaccgc aaagatctcg cccttcggca
      541 ctgcaaggct gagtgcgtca accgcaacca ggccgcggaa gcgcttggta accccgctga
      601 ccgacagcag tgcgctcatt gtttgcgctc cgtgagcccg aaccgccgcg ctaaccaggg
      661 ccagacgcct tccggcagtg caacgaccac cagcagaaga acgaccccaa agaacacctg
      721 ctttatcccg ggcacgtcga caccaagaat ctcaagcaac gttcgcaagc cttcggacag
      781 gccttccaga atgaaggtcc ccacgatcgg gccgaacagc gttccgatgc cgcccaccag
      841 cggtccaaga atgatgtcaa tcgagcggga aatattaaac acctgctcgg gaaaaaggtt
      901 gttgtaatag aacgcgtaga tcacgccggc gaacgcggtc atgcccgagg agatcaccac
      961 cgcgatcatc ttgtagcgaa atgtatcgat accaactgcg cgtgcggcct cctcgtcttc
     1021 gcgaatcgcg agccagaaat aaccgatacg actatgcaga agcgcccgac agccgatgaa
     1081 ggcgagcacc gtcgccgcca acaggatgta ataaaacatc acgggatgcc cgcgcagttg
     1141 ccacaaatcg ttgtggctgt attgtgcgac aggcaggaaa agtccggacg aaccgcgcgt
     1201 ccaggcgaga tgatcgaagc cgacccgcgc gaactccgcg aaggcgatgg tcaggatcgc
     1261 gaaatacacg ccgccgacgc ggaagcgaaa cgccagatag ccgatgaatg cgccggtcgc
     1321 tgcagcgatc ggcaccgccg ccagcagtcc aagccagggc ccgataccga aatgcacgta
     1381 aagcgccgcc gcggcatagg caccgagtcc gacatagagc gcatggccga gcgacaactg
     1441 cccggcaaag cccatcatga tgttccaggc ctggccggtg taggcaaagt agaggatcag
     1501 gattaggaca gtgagaagat agtcgctggc gaaaaaaggc gcgatcagcg ccgcaatcag
     1561 caaaatagcc agcagcacca gtccgcgcgg cgtcgccccg gcagtccagc gcgtgatcat
     1621 gccgccctct tgcccataat gccttgcggt cgaaacagca ggaccagcac cagaatggca
     1681 aaagcgaaca tgctcttggc cgaaggcgtg aacacaagtc cggccagggc ttcggtcaaa
     1741 ccgatcagga ccccgccgat gagcgcgcca ggcatcgagc cgaggccgcc cgtgatgacg
     1801 atcacaaacg cgagcaacgt ataggcgggc cccaccgcgg gagtaacgtc gaaaatgagc
     1861 aaaagcatgc acccggcagc gccgacacag gcggcgccta tgccgaaagt cagcgcgtac
     1921 agtcgtctga catcgaggcc gaccaccatg gcgcctgtgt agttgtcggc gcaggcgcgg
     1981 attgccgtac cgaggcgtgt aaaccggaag aatgcgaaca aaccggtggt cacgacgaca
     2041 gcggtaagac cagcgtagag cttggtggcg tccacgatca gcgggccgac ctgaaagctg
     2101 tcgtaggcat aggccgcttg cacgttctgc gagtcggggc cgaacaggat cagcagcgcg
     2161 ttggtgatga tgatcgcgat ggcgaccagc agaaggaact ggctgtgctc cgggcgggtg
     2221 atgaaccgat tgatcaggcc ggcctgcagc acatacccgc atgcaaacaa caccgccgct
     2281 atgggcacca gcatgaccag tggatcaaga cgaaatgccg agaacagggt cacggcgata
     2341 tacatggcga tcgtcatcat ttcgccatgg gcgaaattga ccacgcggac gacgccaaaa
     2401 atcaccgaca ggcccagcgc catcaggcca tagacaagcc cggtcagaat cccgccgacg
     2461 gcgacattga gataaacatc taccggcact gtccccactc cctgccatcg ccgggctcgt
     2521 cccggcgatc ccgctcagca cggcttgggc cccttaagcg tcacggccgg gtcaagcccg
     2581 gccatgacgg ctgcgctttt aaagcgacgc cggcatcagc tgcgcttgtc gtacggcttg
     2641 agcggccatt ctaccttggc attagccgcc actttcggcg ccacggtcaa aagttttccg
     2701 tcgcgatttt gaatcgcgga attcttcagc ttgtcgttct gacctttttc gttgaactga
     2761 atgccggggc cggggctccc attattggtg aaattcgtgc tgcgaaccgc atcggcgagt
     2821 gccttcggat cggctgagcc agcccgcttg taggcatcgg ccgtaacaag cagggcctcg
     2881 aacgtgtaga cgtggttggt attgagattg atgccaggat gtgccttggc gagcgctgct
     2941 tcgagcgttt tgctgagcgg tttgttcgga tcgtaccagg gtacaaagct cagcggtccg
     3001 tcggacaact tgccgagcgt tttcagatac tgatcctcgt accagccggg gcccatgctc
     3061 aggatcgcca tcggcgacca ccgctgcttc accaattcac gcgtaagcag gatggcatcg
     3121 ttgagccggc tcaccatcaa cagcgcatcc gcacccgtgg cttttgcttt ggccacttca
     3181 accgacaggt cgcgtgctgc cggatcatag gcgatggttt caacaagatt gtacggcata
     3241 ttg
//
LOCUS       DATDHO010000422         2045 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_317211, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000422 DATDHO010000000
VERSION     DATDHO010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2045)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2045)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2045
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317211"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1025)
                     /gene="dinB"
                     /locus_tag="VIY07_08215"
     CDS             complement(<1..1025)
                     /gene="dinB"
                     /locus_tag="VIY07_08215"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019859373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEY6381774.1"
                     /translation="MDTSATILHADLDAFYASVEQLIDPSLRGKPIAVGGGVVLAASY
                     EAKAFGISGGMSGRRARELCPQLIFVGGHFKDYQRLGDAALNVLYDFTPLVERISIDE
                     ALADVAGCTHLFGAPSEIAAAVRRRVRVEVGLPISIGVARTKHLAKIASQVAKPDGLM
                     VVDPESELNFLHDLPVELMWGVGPVTKARLAEMGVHTIGQLAKMPGWSLERVVGRAVG
                     EKLAALAWNRDPREIKTHRRAQSAGAQSALGSKPAEEKVFRPTLRHLADRVASRLRAK
                     SRSGRTVTARVRFADLHSVTRSITLDAPISATASLAEIAEELVRTALADHPHERIISL
                     LGMSVSHL"
     gene            1377..1619
                     /locus_tag="VIY07_08220"
     CDS             1377..1619
                     /locus_tag="VIY07_08220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381775.1"
                     /translation="MTTSPTPEQSATAILDIFKSQNCIAGDPLKISYVKAQFIENYGR
                     AAQYEAGLMYAEDNGWLEVSPARDMFTLTDVGFAKI"
     gene            1729..>2045
                     /locus_tag="VIY07_08225"
     CDS             1729..>2045
                     /locus_tag="VIY07_08225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P460 family protein"
                     /protein_id="HEY6381776.1"
                     /translation="MKRKSKLTIAIAMLAALGGTDIYAQEKYALKSPSGIAFSDFKGY
                     EDWAVVSSARTDEVLKVIVANPTMIEAYKAGVPGNGRPFPDGSKIVKLQWKPKKSTEA
                     PFVV"
BASE COUNT          471 a          599 c          580 g          395 t
ORIGIN      
        1 aggtgtgaca cggacatccc gaggagcgag atgatcctct cgtgaggatg atccgcgagg
       61 gctgtgcgaa caagctcctc ggcgatttcc gcaaggctcg cggtagctga tatcggcgca
      121 tcgagcgtta tagagcgcgt gaccgaatga agatccgcga atcgaacacg ggctgtaact
      181 gtccggccag aacgggactt cgcgcgaagt cgactggcaa ccctgtcggc aagatgacgc
      241 agcgtcggtc gaaatacttt ctcttcagca ggcttgcttc cgagcgccga ctgggccccg
      301 gcggattgag ctctgcggtg agtcttgatt tcccgaggat cgcggttcca ggccaacgcc
      361 gcaagcttct ctcccaccgc gcgaccgacc accctttcga gtgaccaccc cggcatcttt
      421 gccagttgtc caatggtatg cacacccatc tcggccaggc gcgccttggt gaccgggcct
      481 actccccaca tcagctcgac tggtagatcg tgaaggaaat tcagctccga ttcggggtcg
      541 acaaccatca agccgtcggg tttggccact tgcgaggcaa tcttcgcgag atgcttggtg
      601 cgcgccacgc caatcgagat tggaagacca acctcgactc gcacccggcg ccgtaccgcg
      661 gctgcaatct cggatggagc gccgaaaaga tgggtgcaac ccgcgacatc ggcaagggct
      721 tcgtcgattg agattcgttc gacgagaggc gtgaaatcat aaagcacgtt gagagccgca
      781 tcgccaagcc gctggtagtc cttgaaatga ccaccgacga agatcagttg cggacaaagc
      841 tcgcgcgccc gacgccccga catgccgccg ctgattccaa aggctttagc ctcgtaggat
      901 gcggccaaca caactccgcc gccaacagca atgggtttgc cgcgtaacga cggatcgatc
      961 agttgttcga ccgatgcata gaaggcatcg aggtcggcgt gaaggatagt ggctgatgta
     1021 tccatcccaa ggcggcccgt acatattccg ccgcaaatcc ggaaccgctc tcgtcaactt
     1081 ccatctttgc gcggcgcagt ctgcgcttga ctctacacca gcgagcccag gtgagaaacg
     1141 actaatgaat ttcttcttgc aaccctcaaa accgttccag gagtcgctcg cgcttggctc
     1201 aaaaaacagg cgccagcatt cgggccaagc taagccaatg gaggtaccag cgcggccaag
     1261 gtccttgatc aacgccattg tgcggcgcga ttgatttaca tcaatggagt gtcgcggggg
     1321 cgttctagtt tctttaccgg gactggggaa gccataaaaa tgttgagtgt tttggcatga
     1381 ccacgtcacc aacgcccgag caatccgcta ctgcgatatt agacattttc aaatcccaaa
     1441 actgcattgc cggagaccca ctcaagatca gctatgtgaa agctcaattc atcgaaaact
     1501 acggtcgcgc agctcagtat gaagccggcc ttatgtatgc ggaagataac ggctggctgg
     1561 aggtcagccc cgcgcgagac atgttcacac taacagatgt tggttttgca aaaatctgag
     1621 gcagcctgtg gcctctgcgt ctgaaggccg cgtccttacc gcacagacca tgacgttcaa
     1681 atcgctgggc aaacaggctc gccaatgaca gttaaaaaag gatcagccat gaagcgcaaa
     1741 agcaagctca cgattgcgat agccatgctc gccgccctcg gcggcacgga catttacgcg
     1801 caggaaaagt acgcgctgaa atcgccgagc ggaatcgcgt tctccgactt caagggatac
     1861 gaggactggg cggtggtctc ttccgcccgg accgacgaag tgctcaaggt gatcgtcgcc
     1921 aatccgacca tgatcgaggc gtacaaggcc ggcgttccgg gcaacggccg gccttttccg
     1981 gatggctcca agatcgtgaa gcttcagtgg aagccgaaga agagcacgga ggctcccttc
     2041 gtcgt
//
LOCUS       DATDHO010000423         3027 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_317219, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000423 DATDHO010000000
VERSION     DATDHO010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317219"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VIY07_08230"
     CDS             complement(<1..258)
                     /locus_tag="VIY07_08230"
                     /inference="COORDINATES: protein motif:HMM:NF018028.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEY6381777.1"
                     /translation="MPDVTVASDASSDTQAYVRFTRRVQAVLVDTIIFMIVLAGALAV
                     AVAFASDNIARIVGFTVAATWLFYEPMLVSLTGGTIGHYLFN"
     gene            complement(383..1636)
                     /locus_tag="VIY07_08235"
     CDS             complement(383..1636)
                     /locus_tag="VIY07_08235"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEY6381778.1"
                     /translation="MARLVMKFGGTSVADLDRIRNVARHVKREVDAGYDVAVVVSAMA
                     GVTNQLVDWCKEAAMLHDAREYDAVLATGEEVTAGLLAIVLEGMGVNARSWQGWQLPV
                     LTDNAHGSARIMDVNGAELIKRFKEHAQVAVIAGFQGLHKDTGRVTTLGRGGSDTSAV
                     AIAAAIGAERCDIYTDVDGVYTTDPRVVPKAHRMDKIAYEEMLEFASLGAKVMQVRSV
                     ELGMVHNVRIFVRSSFEKPEDIDSSKPLRGTLICDEGDIVEQQVVTGIAFSKDEAQIS
                     IRRVQDKPGVAAAIFGPLADSNINVDMIVQNVSADGATTDLTFTVPSADYERARVTIE
                     RAKGSIGYERLDGATDVAKVSVIGIGMRSHAGVAAQAFKALSQQKINILAITTSEIKF
                     SVLIKAGQTDLAVRTLHTLYGLDKI"
     gene            1798..2247
                     /locus_tag="VIY07_08240"
     CDS             1798..2247
                     /locus_tag="VIY07_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011438980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEY6381779.1"
                     /translation="MRYIDNILQPGETVAFTTTLHWIVYLPAISLWFLAFIAISVGGA
                     MGPVAILAAIVCALVGSALAFSAWFRRWTTEIDVTDRRIVFKRGFIRRHTVEMNMDKV
                     ESVDVDQSILGRMLDYGDITIRGTGIGIEPLRNIDSPLEFRNQVTAR"
     gene            2269..>3027
                     /gene="ubiG"
                     /locus_tag="VIY07_08245"
     CDS             2269..>3027
                     /gene="ubiG"
                     /locus_tag="VIY07_08245"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEY6381780.1"
                     /translation="MSGRRHTSSVDPVELERFSRYAADWWNPRGSMAPLHKFNPVRLG
                     YIRDQVAARFNRDPKKLDCLKGLRLLDIGCGGGILSEPLARLGAKVLGADPSAENIAA
                     ARAHAEESGVKVDYRATTAEELADAKERFDVVLAMEVVEHVADVAAFVDACATMVKPG
                     GLMIAATLNRTLKSFAFAIVGAEYVLRWLPRGTHQWDKFVTPRELETAIEDGGLEVIG
                     ERGVVYNPFADRWQLSSDMDVNYMLVAERPKQKGE"
BASE COUNT          612 a          913 c          911 g          591 t
ORIGIN      
        1 gttaaaaagg taatggccaa tcgtgccgcc ggtcaaagac accaacattg gctcataaaa
       61 cagccacgtg gcggcgacgg taaatcccac aatgcgggcg atgttgtccg atgcgaaagc
      121 gaccgcgacg gcaagcgcgc cggccagaac gatcatgaaa atgatggtat cgacgagcac
      181 ggcctgcacg cgcctggtga agcgaacgta ggcttgcgtg tccgaagaag catcgcttgc
      241 gacagtcaca tcaggcatcc atggcgtccg gtcaatgaca acggtcatcg ctcaaaggtt
      301 caaacgccag ccagcgattt ctattccgtg ccacgattgc tgtgcgcgcg attgccgagc
      361 tcaaaaaagc gtcagccatc gctcagatct tgtccaatcc gtacaacgtg tgcagggtgc
      421 gaaccgccag gtcggtctga ccggccttga tcagcacgga gaatttgatc tcggacgttg
      481 tgatcgcgag aatattgatc ttctgctgcg acaatgcctt gaaggcctgt gcggcgacgc
      541 cggcatggct gcgcatgccg atcccgatca cggagacctt ggcaacgtcg gtcgccccat
      601 cgagccgctc gtagccgatc gatccttttg ccctttcgat cgtgacgcga gcgcgttcat
      661 agtcggcgga agggaccgtg aaggtgagat cggttgtcgc gccgtcagcg gatacgttct
      721 gcacgatcat gtcgacgttg atattgctgt cggcgagcgg accaaagatt gcggcggcga
      781 cgcccggctt gtcctgcacg cgacggattg agatctgcgc ctcgtccttt gaaaatgcta
      841 tgccggtgac gacctgctgt tccacgatgt ctccttcgtc gcaaatgagt gttccgcgca
      901 gcggcttcga tgagtcgata tcctccggct tctcgaagct tgaacgcacg aatattcgaa
      961 cattgtgcac cattccaagc tcgacggaac gtacctgcat gaccttggcg ccaagcgagg
     1021 caaactccag catttcctcg taggcgatct tgtccatgcg gtgagccttc ggcacgacgc
     1081 gaggatcggt cgtatagacc ccgtccacgt cggtgtagat gtcgcagcgt tcggcgccga
     1141 ttgccgccgc gatcgcgacc gccgatgtat cagagccacc ccgtccgagc gtggtgaccc
     1201 ggcccgtgtc cttatgcagt ccttggaagc ccgcgatgac cgcgacctgc gcatgttcct
     1261 tgaaacgctt gatcaactcg gcgccgttca catccatgat gcgggccgat ccgtgcgcat
     1321 tatcggtgag gaccggcagc tgccagccct gccatgaccg cgcgttcacg cccatgcctt
     1381 cgagtacgat cgcgagcagc cccgccgtca cctcctcgcc ggtcgccaag accgcgtcat
     1441 actcgcgggc atcgtgcagc atggccgcct ctttgcacca gtcgaccagc tggttggtga
     1501 cgccggccat ggccgacacc acgacggcga cgtcgtaacc cgcatcgacc tcccgcttga
     1561 cgtggcgcgc cacgttacgg atgcgatcga gatcagcgac ggatgttccg ccgaatttca
     1621 tcaccagtcg agccatgact ttcccgaatg cgcgaacggc gccaagaaat ggccggcgca
     1681 aagcatcaaa cgcccgagcg ccggcccgaa aaggcgcgta tacataccgg cggggtgcgg
     1741 caaccgcaac atcggcgcca tgacgccgtc ataatgccga agaaccgggg cctgaccatg
     1801 cgctacatcg ataacattct gcagccgggc gagactgttg cctttacgac caccctgcac
     1861 tggatcgtct atctgcccgc gatcagtctg tggttcttgg ccttcatcgc aatcagcgtg
     1921 ggcggcgcaa tgggtccggt cgcgatcctg gcggcaattg tttgcgcgct ggtgggctcg
     1981 gcgctagcgt tcagcgcctg gtttagacgg tggacgactg agatagacgt gaccgaccgc
     2041 cgcattgtct tcaaacgcgg ttttatccga cgccatacgg tcgagatgaa catggacaag
     2101 gttgagagcg ttgatgtcga ccaatcgatt ttgggcagga tgctcgatta cggtgacatc
     2161 acgattcgcg gaaccggtat cgggatcgag ccgctgcgca atatcgattc gccgctcgaa
     2221 ttccgaaatc aggtaacggc ccggtgaaag gcattgctgg agtcgaacat gtcaggccgc
     2281 cgtcacacat cgtcagtcga cccagtcgag cttgaacgct tctcccgcta tgcggccgac
     2341 tggtggaatc cgcgcggctc gatggcgcca cttcacaaat tcaatcctgt ccggctgggc
     2401 tatatccgtg atcaggtcgc cgcgcgcttc aatcgcgacc caaaaaagct cgactgcctg
     2461 aaagggctgc gtctcctgga tatcggctgc ggcggcggca tcctctcgga acccctggcg
     2521 cgtctgggag cgaaagtcct cggggcagat ccgtcggcgg agaacatcgc tgcggcgcgc
     2581 gcgcacgccg aggaatcggg cgtaaaggtc gactaccgcg ccaccacggc ggaggaactc
     2641 gccgacgcca aagaacggtt cgatgtcgtg ctggccatgg aagtcgtcga gcatgttgcc
     2701 gacgttgcag cgttcgtcga cgcttgtgca acaatggtca agccaggcgg acttatgatt
     2761 gccgccactt tgaatcgcac cctgaagagt tttgcattcg ctattgtcgg cgctgagtac
     2821 gtattgcgct ggctgccacg cggcactcac cagtgggaca agttcgtcac gccgcgggaa
     2881 ctggagaccg cgatagagga tggcgggctg gaggtgattg gcgagcgggg cgtcgtctac
     2941 aatccgttcg cggaccgatg gcaattgtca tcggacatgg acgtcaacta catgctggtg
     3001 gcggagcgcc ccaagcaaaa aggagaa
//
LOCUS       DATDHO010000424         2845 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_218572, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000424 DATDHO010000000
VERSION     DATDHO010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2845)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2845)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2845
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_218572"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2316)
                     /locus_tag="VIY07_08250"
     CDS             complement(<1..2316)
                     /locus_tag="VIY07_08250"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEY6381781.1"
                     /translation="MDAAVNPKTGAATTAWHALTVDEVLQRLTTSTEKGLDASEASTR
                     LQKYGPNRLPEGKKRGPFMRFLSQFNNILVYVLLGAGFIKLMLNLWVDAGIIFGVVIL
                     NALLGFIQEGKAEKALDSIRNMLSAEARTLRGGETRMIPAEQLVPGDVVLLESGDKVP
                     ADLRLADAKNLRAEEAALTGESVPTEKTTNPVSTNATVGDRESMAFSGTMVVSGRATG
                     VVVATGSETELGRINQLLASVSALETPLLRQIKKFGYAITAAVGIVGVLVFAYGKWVQ
                     GIPFVELFQAVTGIAVSLIPEGLPALITITLAIGVQRMAQRNAIIRRLPAVETLGSVS
                     RICSDKTGTLTLMEMMVVSAVTAESQYQITGNGYAPEGEIKKDGKPADKEPVLGLMGR
                     VSMLCNDAELFQQEGAWKVEGDPTEGALYPFATKLGMQRQAEQTAYPRIDAIPFESEH
                     KFMATLHKSGDGKQTLLVKGAPEVILDACDRQQTADGKQAPINRDHFLEASDKLAGQG
                     ERVLALAWHENPGLKAGSLGPADLPKSLTLLGLIGLLDPPRKEAIEAVKECHGGGIRV
                     TMITGDHKITAAAIAKMLGIGDGKTAVTGVEIEEMNEAALQDRVRDVDVFARASPEHK
                     LRLVKAIQANKQIVAMTGDGVNDAPSLKKADIGVAMGIKGTEVTKEAAGMILADDNFA
                     SIGAAVKEGRTVYNNIEKAILFMLPTNVAQGLVIAVAIFLGFTMPITAPQVLWVNMVT
                     SVALGLVISFEPHELDVMNRPPRAVDRPILTG"
BASE COUNT          492 a          870 c          866 g          617 t
ORIGIN      
        1 gcccgtcagg atcgggcggt cgaccgcgcg cggcgggcgg ttcatcacgt cgagctcgtg
       61 aggctcgaag gagatgacca ggccgagtgc caccgacgtc accatgttga cccagagcac
      121 ctggggcgcc gtgatcggca tggtgaagcc gagaaagatc gccaccgcga tgaccagccc
      181 ttgggcgacg ttggtcggca gcatgaagag gatcgctttc tcgatgttgt tgtaaaccgt
      241 gcggccttct ttcaccgccg cgccgatcga ggcgaagttg tcgtcggcca aaatcatccc
      301 agccgcctct ttggtgactt cggtaccctt gatccccatg gccacgccga tgtcggcttt
      361 cttcaacgac ggcgcgtcgt tcacaccgtc gccggtcatt gcgacgattt gcttgttcgc
      421 ttggattgcc ttcacgagcc gcagcttgtg ctcggggctg gcacgcgcga acacgtcgac
      481 gtcgcgcacc cggtcctgca gcgctgcctc gttcatctcc tcgatttcca cgccggtgac
      541 cgccgtcttg ccatcgccga tgccgagcat cttggcaatc gctgcagcgg tgatcttgtg
      601 atcacccgtg atcatcgtta cccggatccc gccgccgtgg cactctttca ctgcctcgat
      661 cgcttccttc cgcggggggt ccagcaggcc gatcagaccg agcagggtga ggctcttcgg
      721 taggtcggca ggcccgagac ttcccgcttt aaggcctgga ttctcgtgcc aagccagcgc
      781 cagcacccgc tcgccctggc cggcaagttt gtcggaggcc tcgaggaagt gatcacggtt
      841 gatcggcgct tgctttccgt ctgcggtctg ctgccggtcg caagcgtcga ggatgacttc
      901 cggcgcgcct ttcaccagta gggtctgttt cccgtcgccg ctcttgtgga gcgtcgccat
      961 aaacttgtgc tctgactcga acggaatagc gtcgatgcga ggataggctg tctgctcggc
     1021 ttgtcgctgc atcccgagtt tggtcgcaaa ggggtagagc gctccttcgg tgggatcacc
     1081 ctctaccttc cacgcccctt cctgttggaa aagctcggca tcgttgcaga gcatggagac
     1141 gcgccccatc agcccaagaa cgggttcctt gtctgccggc ttgccgtctt tcttaatctc
     1201 gccctcgggc gcgtagccgt tgccggtgat ctggtactgc gattcggcgg tgacggcgga
     1261 gacgaccatc atctccatca gggtcaaggt gccggtcttg tccgaacaga tgcgcgacac
     1321 cgagccgagg gtttcaaccg ccggcaggcg ccggatgatg gcgttgcgct gggccatccg
     1381 ctgcacgccg atcgccaggg tgatcgtgat gagcgccggg agaccttccg gaatcaacga
     1441 caccgcgata ccggtaacgg cctggaagag ctccacgaat ggtatgccct gcacccactt
     1501 gccgtacgcg aacaccagaa cgcccacgat cccgacggcg gcggtgatgg catagccgaa
     1561 cttcttgatc tggcgcagga gcggcgtctc gagggcgctg acgctggcga gaagttgatt
     1621 gatgcggccc agctcggtct cgctgcccgt cgcgacgacg acccctgtcg cgcgcccgga
     1681 cacaaccatg gttcccgaga acgccatgct ttcgcgatct ccgaccgtcg cgttggtcga
     1741 gacggggttg gtagttttct ctgtcgggac cgactcgccg gtgagtgccg cttcttctgc
     1801 gcgcaggttc tttgcatcgg cgaggcgaag atcggcggga accttatcgc ccgattcgag
     1861 cagcacgacg tcgcctggaa cgagctgctc cgccgggatc atgcgtgtct cgccgccacg
     1921 caaggtcctc gcttccgcgg acagcatgtt gcggatcgaa tccagagctt tttccgcctt
     1981 gccctcctgg atgaacccga gcagcgcatt gaggatgacg acgccgaaga tgattcccgc
     2041 gtcgacccac agattcagca tcagcttgat gaaaccggcg ccgagcagga cgtagaccag
     2101 aatgttgttg aactgggaga ggaagcgcat gaatggtccg cgcttcttgc cttccggcag
     2161 gcgattgggc ccgtactttt gcaggcgagt cgaggcttcg ctggcatcga ggcctttttc
     2221 ggtgctggtc gtgagccgct gaagcacctc gtcgacggtg agggcgtgcc aggccgtggt
     2281 ggcggctccg gtcttggggt tcactgctgc atccattaag gtactccctt ccggttgatt
     2341 atccgccgtc aggcggaaca cggttgcaat tcgtgcttag tacgctcgaa tcaaaagcgc
     2401 cagtaagagc ggcacgatta caggatgaac ttcgtgttgc ttggctgggc cccgggctta
     2461 gccgttcgct gcggtccgcg cgcaagcggg actcaaactc tgcgattcta tgcacggaga
     2521 cagctttaca gtcaactttg gtatttcttg gcctttctaa ggaaattggt ggcgcgaatc
     2581 cagtgtcgac tcaaaagttc aacttgtgat agcaatgttc aatgatagcg tcattgtaga
     2641 ctcataggag caccagatcg gcgaaaccca ctatcctttc gaaccagtac acgagcgttt
     2701 tatgaaaagc agcgcgttct caattttact tgccctatgc gcttttcttt ctgggtgcgc
     2761 cacgatgcag accggaggcg cctttcaggc aggccggcgc gcactcattg cgggagacga
     2821 tgaagccgcc ctcagctttt ttcag
//
LOCUS       DATDHO010000425         3674 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_268551, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000425 DATDHO010000000
VERSION     DATDHO010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3674)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3674)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3674
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_268551"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..687
                     /locus_tag="VIY07_08255"
     CDS             <1..687
                     /locus_tag="VIY07_08255"
                     /inference="COORDINATES: protein motif:HMM:NF020119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HEY6381782.1"
                     /translation="RGENEWPLARTRWTRYFLQPDGLRLEPEHTPHSASLSYDTTGDG
                     LTFSTPPLKDSFEITGPVAAKLWVSSQTSDADLFLALRLFDPAGKEVTFIGSNDPRVP
                     VGLGWLRASHRKLDPQRSLPYRPWHTHDEEWPLTPGEPVELDIEIWPTSIVVPAGYRF
                     ALTVSGKDYEVDGTDAALPNAPYPMKGVGPFLHVDSDDRPATVFDTRNTLHFAPGRAP
                     YILLPVIPTA"
     gene            719..1153
                     /locus_tag="VIY07_08260"
     CDS             719..1153
                     /locus_tag="VIY07_08260"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6381783.1"
                     /translation="MLRRFLAAVLPAICLFALVAQASAQQYPSRTVTVIVPYPAGGPT
                     DETARVVANFLSKKLGQNFIVENVTGASTIVATNRLAKAAPDGYTLLLHNLQIAANVT
                     LVKNLPFDTAKDIVAVMLVNKNPLVLVGRPGLAPNNLTELRS"
     gene            1150..1692
                     /locus_tag="VIY07_08265"
     CDS             1150..1692
                     /locus_tag="VIY07_08265"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6381784.1"
                     /translation="MKKQRLREALPGYGTTGHLTSALFAQEAKVDIDFIPYRGAAPAM
                     NDLLGDHVDLFVGTPQSVAPHVAAGKLKAYAITSKEKLPQLPTTESLVDALGPKFDIV
                     YWQAMFAPAGTPPEVIKTLNGALQDAVSDPDIVKTWADQGFAAFPKDQRSPEAANAMM
                     KSEVERWGQVIRDNNIQATQ"
     gene            complement(1737..2924)
                     /locus_tag="VIY07_08270"
     CDS             complement(1737..2924)
                     /locus_tag="VIY07_08270"
                     /inference="COORDINATES: protein motif:HMM:NF018234.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY6381785.1"
                     /translation="MNDKLEELSFTYFPEDYRWSHGLLICLNMAPWGGAEIGEVNRIG
                     LRLKNSVGDDDAWFEEWCREARNLEERGRERIRDGYTASGAQYLQRASAYYHVGERFL
                     QPKSEDGLDAYMRGVTSFRDAAKYIKRPRLEYVEIPYEGASLPAIYVHAEPQSRAGKG
                     PAVVFFDGLDVTKEIQYFKGVPDLVARGIACLIVDGPGNGESIRFRGLYLRHDTEHYA
                     TPVWDYLASRPEVDPRRIGVMAISLGGYYAPRAAAFEQRFACCLAWGAQWDYQKIWRD
                     RFERLARADTPSLSVAAQHISWVLNATSQDDALRRLEPFKLDGVVQKITCPFLMLHGE
                     GDEQIPLSEARKCFDAVGSKQKTMKIFTREEGGYHHCQIDNQSICSAYMWDWLEQVLQ
                     PAR"
     gene            complement(3068..3271)
                     /locus_tag="VIY07_08275"
     CDS             complement(3068..3271)
                     /locus_tag="VIY07_08275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012322269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEY6381786.1"
                     /translation="MPKGTVKFFNTQKGYGFIQPDDGSKDVFVHITAVERAGMRSLME
                     GQKVSFEIVTERGKQAAGNLQPA"
BASE COUNT          765 a         1115 c         1031 g          763 t
ORIGIN      
        1 cgcggagaaa acgaatggcc actcgcgcgc acacggtgga ccagatattt cctgcaaccg
       61 gatggactgc gcttggagcc ggagcatacg ccgcactccg caagcttgag ctatgacaca
      121 accggcgacg gtctgacttt cagcacgcct ccgctcaaag acagtttcga gatcaccggc
      181 cccgtcgctg ctaaactgtg ggtgtcatcg caaacatccg atgccgacct gttcctggca
      241 ctgcggctct ttgatccagc gggcaaggag gtcaccttta tcggctcgaa cgatccgcgc
      301 gttccggtag gacttggctg gctgcgcgca tcgcatcgca aactcgatcc gcagcgctct
      361 ttgccttacc ggccgtggca tacgcacgac gaagagtggc cccttacgcc tggcgagcct
      421 gtggagctcg acatcgagat ctggccgacc tcgatcgtgg tgcccgcggg ctatcggttc
      481 gccttaaccg tgagcggcaa ggactacgag gtcgacggca ccgatgcggc actgccgaac
      541 gcgccgtatc cgatgaaagg cgttggcccg tttctccacg tcgattccga cgaccggcca
      601 gcgaccgtct ttgacactcg caatacgctg cattttgcac ccgggcgagc accatatatc
      661 ttgttgccgg tcattcccac ggcgtagagt ttggaaaaat tatcgagtgg aggcgcgcat
      721 gctgaggcgt tttcttgccg ccgtgttgcc ggccatttgc ctgttcgcgc tcgtcgcgca
      781 ggcttcggcg cagcaatatc caagccgcac cgtcaccgtt atcgtgccct atcccgccgg
      841 cgggccgaca gacgagactg cgcgcgtggt tgcgaatttc ctgtcgaaga agctgggcca
      901 aaacttcatc gtcgagaacg tcaccggcgc cagcacgatc gtcgccacca atcgcctggc
      961 caaggccgca cccgatggct acacgctctt gctgcacaat ctgcaaattg cggcgaacgt
     1021 cacgctggta aagaatttgc cgttcgacac cgcaaaagac atcgtcgccg tcatgctggt
     1081 gaacaagaac ccgctggtat tggttggtcg ccccggactt gcgccaaaca acctgacgga
     1141 attgcgctca tgaagaaaca gcgtttgagg gaggctttgc cgggttatgg cacgactgga
     1201 catctgacct ctgcgctgtt cgcgcaggaa gcgaaggttg acatcgattt catcccctat
     1261 cgcggtgccg cgcctgcaat gaacgatctt ttgggcgacc atgtggattt gttcgtcggc
     1321 acgccgcaat cggtcgcgcc gcatgtggca gccggaaaac tgaaggctta cgccatcaca
     1381 tcgaaggaga agttgccgca gctgccgacc actgaaagcc tggtcgatgc gctcgggccg
     1441 aagttcgaca ttgtgtactg gcaagccatg ttcgcgccgg cgggaacgcc gcccgaggtg
     1501 attaaaacgc tgaacggtgc cctgcaggac gcggtttcgg atccggacat cgtcaagacc
     1561 tgggcggacc agggcttcgc tgcttttccg aaagatcagc gttcgcctga ggctgccaat
     1621 gcgatgatga aaagcgaggt tgagcgctgg ggccaggtta tccgcgacaa taacattcag
     1681 gccacgcagt aggtcacgtt ttcacttgag agccctggcg gcgctcgaag gaagcctcat
     1741 cgtgccggtt gcaagacctg ctcaagccag tcccacatgt atgccgagca gatgctctgg
     1801 ttgtcgatct ggcaatggtg ataaccaccc tcttcgcgcg tgaagatttt cattgttttc
     1861 tgcttcgaac cgacggcgtc aaaacatttc cgcgcctcgc tcaggggaat ctgttcgtcg
     1921 ccttccccgt gcagcatcaa aaaaggacaa gtgatttttt gcacaacgcc atcgagcttg
     1981 aacggctcaa ggcgtctgag cgcgtcgtcc tgtgatgtgg cattcaggac ccatgaaatg
     2041 tgttgcgcgg caacagacag cgacggcgtg tcggcgcgcg ccaggcgctc gaaccggtca
     2101 cgccagattt tctggtaatc ccattgcgct ccccaggcga ggcagcaagc aaaacgctgc
     2161 tcaaacgctg ctgcacgcgg cgcgtagtag ccgccaaggc tgatcgccat gacgccaatc
     2221 cgccttggat cgacttcggg ccgggatgca agatagtccc ataccggtgt cgcatagtgc
     2281 tcggtatcgt gtcgcagata gaggccgcga aaacggatgc tttcaccatt tccaggtcca
     2341 tccacaatca ggcacgcaat gccgcgggcg accaggtcgg gcacgccctt gaagtattga
     2401 atctccttgg tgacatcgag accatcgaag aaaactacgg ccggcccttt gcccgcacgg
     2461 ctctgcggct cggcatgaac atagatcgca ggaaggctcg cgccttcata tgggatctcg
     2521 acgtattcta gccgcggccg cttgatgtat ttggcggcat cccgaaaaga cgtgacccct
     2581 cgcatgtagg cgtcgagccc atcctcgctc ttcggctgca ggaaacgttc ccccacgtga
     2641 tagtacgcac tcgcgcgctg gagatattgc gcgccgcttg cggtatagcc atcgcggatg
     2701 cgttcgcggc cgcgctcttc caggttgcgc gcttcgcgac accattcctc gaaccacgcg
     2761 tcatcatcgc caacggagtt tttaagtctc aatccgattc gattgacctc tccgatctcc
     2821 gccccgcccc acggggccat attcaggcag atcaacaggc catgcgacca gcgatagtct
     2881 tccggaaaat aggtgaaaga cagttcttcc agcttgtcgt tcatcccgtc caatccagcc
     2941 actcgtcgtc cagagcaatg ggaaggatgt actcgagacc accatttcgg ctaccgaatt
     3001 ctttgcttcg caaatacaaa aagcccggcg tcgccgccgg gcttcggctt caaagctaac
     3061 gagccaatca ggccggctgc agattgccgg cggcctgctt gccacgctcg gttacgattt
     3121 cgaagctgac cttctggccc tccatcagcg agcgcatgcc ggcgcgctcc actgccgtga
     3181 tgtgcacgaa cacatctttc gagccatcgt cgggctgaat gaagccgtag cccttttggg
     3241 tattaaaaaa cttcacagtt cctttaggca tcaagagttt cctttttcac gcttcctgtt
     3301 gaacgcccac gcgttcatcg cgtcgacggt cacaagccaa gttttcggga gttcacttga
     3361 ggcgcagccc aagaccggga gcgtggcagc aagttgaggc ctaaaaacag gttgcgggcg
     3421 gccacataga cggatttcaa cggaacgtca acggttccgc gcacttaggc gaatttcaga
     3481 taacgttttg tgaattcgta accccaactc gttggtacaa tcggcgcttt gagcgcattt
     3541 gtttaaagga tcatgaaggt gaaattaccg tcgagcaatt gtggcgacgg tggggccgag
     3601 caacgaacgc ctgttccaag acaggcgttc gccgcaccaa tatcccgact ccggacaatt
     3661 ccgctgaacg cacc
//
LOCUS       DATDHO010000426         2194 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_317391, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000426 DATDHO010000000
VERSION     DATDHO010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317391"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..343)
                     /locus_tag="VIY07_08280"
     CDS             complement(<1..343)
                     /locus_tag="VIY07_08280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY6381787.1"
                     /translation="MTADSTILVELRTGYRVITLNRPDKLNAFNDAMHRALCEAMGDA
                     EADESCRALLLTGAGRSFCTGQDLSDRVGKSSESVVLGGAQETYYNPLVRKLRNLPFP
                     VVAAVNGVAAGA"
     gene            complement(340..1182)
                     /locus_tag="VIY07_08285"
     CDS             complement(340..1182)
                     /locus_tag="VIY07_08285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1932 domain-containing protein"
                     /protein_id="HEY6381788.1"
                     /translation="MTPTVSIVAPGSMGAGLGRRLNENGVTVLTSIAGRSEESVKRAR
                     EAGMQAAEDRALAEADFLMSVIPPGEALALAQRLAPVLAAANRKPIYVECNAVSPATM
                     LKIADVIAATGCRFVGAGIIGPPPKPGSSNTKIYASGSAAKDLACLNDYGMIVRVLEG
                     PLTAASALKMSYAGITKGFTALGATMMLAAARGGSAAALNAELSESRPDLLRYLSNQV
                     PAMYSKSYRWVAELDEIASFIGDEHPEHDMLTAAARLYERIAQDYEGEKKETGALDDF
                     VGKT"
     gene            complement(1179..1964)
                     /locus_tag="VIY07_08290"
     CDS             complement(1179..1964)
                     /locus_tag="VIY07_08290"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011654907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase family protein"
                     /protein_id="HEY6381789.1"
                     /translation="MNADPNTSIFPGLKDRVVIITGAGQGIGRVFAKSFAMAGARAVI
                     AEINESKAAAVSKEIMEAGGESLAVTTDVSDSASIDEMIDVVEDEYGRIDVLINNAAI
                     FSTLDMRPFDQIPLEEWDQVLRVNLTGPFLCARAVVPVMRRAKWGRIINVGSGAVRLG
                     RPNYLHYIASKAALAGMSLSMAREVSADGITVNTILPGATFTEIERKTVTPEQKERII
                     AMQCVPCAEKPEDLVGAVLFLASEASSFVTGQSINLDGGVTGS"
BASE COUNT          408 a          697 c          650 g          439 t
ORIGIN      
        1 cggcaccggc agcaactccg ttgaccgcag ccacgacagg aaagggcagg ttccgcagct
       61 tgcggaccaa agggttgtaa tatgtctcct gggcgccgcc gagcacgacg ctctcgctgc
      121 tcttgccaac ccgatcgctc aggtcctgac ccgtacagaa gctgcggccc gcgccggtca
      181 gcaacagagc ccggcagctt tcgtcggctt ccgcatcccc catggcttcg cacagcgcac
      241 gatgcatggc gtcgttgaag gcgttgagct tgtcgggccg gtttaacgtg atgacgcgat
      301 aaccggtgcg cagctcgacg agaatagtgg aatcagcagt catgttttgc caacgaaatc
      361 atcgagcgcg ccggtttcct ttttctctcc ctcgtagtcc tgcgcgatgc gctcatagag
      421 gcgggcggcc gcggtcagca tatcgtgttc gggatgttcg tcgccgatga agcttgcgat
      481 ttcgtccagc tcggccaccc aacgatagga cttggagtac atggctggca cctggttcga
      541 cagataccgc aacaggtccg ggcggctttc ggacaactct gcattcaagg cggcggccga
      601 accaccgcgc gccgccgcca gcatcatggt cgcgcccagc gcggtgaatc ccttcgtgat
      661 gccggcgtag gacattttca gcgccgaggc ggcggtgagg ggaccttcga gcacccgcac
      721 gatcatccca tagtcgttga ggcatgcgag atccttggcc gcagaaccgg aggcgtaaat
      781 ttttgtattg ctgcttcccg gctttggcgg cgggccgata atccccgcgc ccacaaaccg
      841 acagccggtt gcggcgatga cgtcggcaat tttcagcatt gtcgccgggc tgaccgcgtt
      901 gcattcaacg tagatgggct ttctgttagc tgctgcgagc acaggtgcaa ggcgctgcgc
      961 aagcgccaag gcctcgcccg gcggaatgac cgacatcaaa aagtcggcct ctgcaagcgc
     1021 gcggtcctcg gcggcctgca tgcccgcttc gcgcgcccgt ttcacgcttt cctcgctccg
     1081 tccggcgatc gatgtgagca ccgtgactcc attttcgttc agccgccggc caaggccggc
     1141 gcccatactg cccggtgcaa cgattgagac agttggagtc atgagccggt cacgcccccg
     1201 tcgagattga tactttggcc cgtgacaaac gaggaggcct cggaggccag gaacagcacg
     1261 gcgccaacca ggtcttcagg cttttcggcg catggcacgc attgcatagc gataatgcgc
     1321 tccttctgct cgggcgttac ggttttgcgt tcgatttccg tgaaggtcgc gccaggcaaa
     1381 atagtgttga cagtgatgcc gtcagcgctc acctcgcgcg ccatcgacag gctcatgccg
     1441 gcgagtgcag ccttgctcgc gatgtagtgg agatagtttg gccggccaag ccgcacggca
     1501 ccggagccga cattgatgat gcggccccat ttcgcccgcc gcatgaccgg caccaccgcg
     1561 cgggcgcaca gaaatggtcc cgtgaggttg acgcgcagca cctggtccca ttcttccagc
     1621 ggaatctggt cgaacgggcg catatcaagt gtcgaaaaaa tcgctgcatt gttgatcagc
     1681 acgtcaatgc ggccatattc gtcctcgacc acgtcgatca tttcatcgat cgatgcagaa
     1741 tcggagacgt cggtggtgac cgccagcgac tctccgccgg cctccatgat ttccttggaa
     1801 accgctgccg ccttgctttc attgatctca gcaatcacgg cccgcgcgcc cgccatagca
     1861 aaggattttg cgaagactcg gccaatgcct tgccctgcac cggtgatgat gacgacgcga
     1921 tctttaaggc ctggaaaaat cgaagtgttt gggtccgcgt tcatatgggt gcccctgcgt
     1981 ctccgcttcc gcggggacga acgataaggc ggcgccttga cgcatatccc gcgaaagcgg
     2041 gcatccagcc ccttctgata atcatgccgc gcctcgcgcc ggttgtggca acgattccag
     2101 cgacgcgcgg gcgttccatg gcgtccacca tggtttcaaa cccaaatcgt tcgcaatgat
     2161 gcccgcgctg atatagcccg cgcctcccga gatc
//
LOCUS       DATDHO010000427         2133 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_366540, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000427 DATDHO010000000
VERSION     DATDHO010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2133
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366540"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            683..2107
                     /gene="dnaA"
                     /locus_tag="VIY07_08295"
     CDS             683..2107
                     /gene="dnaA"
                     /locus_tag="VIY07_08295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEY6381790.1"
                     /translation="MSNGEQESWSRVKERLRAEVGDDVYSSWFARMDLEAIEEGAVRL
                     SVPTRFLKSWIQSHYAERVLACWQAQESTVTRVELIVRSAVLKSAVLPKAKPDITADS
                     ASRYTNGNSNGRAFSPGDPSVHEALGGSPLDPRLTFDTFVVGRSNTLAHAAAKQVAGA
                     KRGDPVMFNPLYIHSGVGLGKTHLLQAVTWAGNAAGERKVLYLTAEKFMYGFVSALRT
                     QTALAFKEALRGIGVLVIDDLQFLQGKSTQAEFCHTLNALIDAGRQVVIASDRPPSDL
                     ESLDDRVRSRLAGGLVVEMGPLGEELRFEILKARVLAARAHHPAFDVPLPVLGYIAKT
                     VTHNGRDLEGALNRLLAHNKLTGHAVTLEMAEREVRDLIRPQEPKRVKIEDIQRVVAR
                     QYNVSRSDLLSSRRTANVVRPRQVAMYLAKTLTLRSLPEIGRRFGGRDHTTVLHAVRK
                     IEGLVGNDMALAEEIEILKRQLQE"
BASE COUNT          438 a          633 c          643 g          419 t
ORIGIN      
        1 acaggcgtaa atttcattgc gagcgcacat tgcttgtgta tcttgaaacc gcgcacggga
       61 attcttcgtg cgtgatcata aacaaggatc aacgtcacgc tcatcggcgg atgagaacgg
      121 ctttggtttg cctctttgta ccgaggatag ccacgtcaaa cgccgaaata gttcggtatc
      181 gaatttgaga tcaagttcag tgggttcggt tgcagcgctt taatgtcgat tgctcccgtg
      241 ccgcttaaga ctgaagaaca aaccagaggg cgaaagccca agtcattcga ggggtgatgt
      301 catgacaggc gcagatagag ggtcgctgac caacgcaagt ggcattggac ggctgtcgtc
      361 caatgcagat tcgtatgtcg cttcggcccg tgccgccggt caatcaggtt cgcactcata
      421 tttagcttat ttcagctgcc gaaaagcgtt gatcttcacg aacggaattc gaggcgccac
      481 tccgccaccc gcgggctgaa ggcgcaacgc ccctcgacgt ttcgtcgatg cgctccgccg
      541 actactcact gtggtggaat ccgcatctcg cagacgataa ccatcaggcg agtgttgttg
      601 cgtcccgttt ttccggtgcg tcggcgtcca tcgccaagcc ggtccaccga gtccgtcaaa
      661 ccctttagat cgagaacaag aaatgtccaa tggggagcag gaaagctggt cacgggtcaa
      721 agagcgcttg cgcgcggaag tcggcgacga tgtttattcg agctggtttg cccgtatgga
      781 cctggaggca atcgaggaag gtgcggtccg cttgtcggtg ccaacccgtt ttctcaagag
      841 ctggattcaa tctcactatg ctgagcgtgt cctcgcctgc tggcaggccc aggaaagcac
      901 agttacccga gtcgaactga tcgtgcggtc ggcggtattg aaatccgcag ttctgccaaa
      961 ggccaaaccg gatatcaccg ccgatagtgc cagccgctac acgaatggaa acagcaatgg
     1021 ccgcgctttc tcgcccggcg atcccagcgt gcatgaggcg cttggcggat ccccgctcga
     1081 tccgcgcctg accttcgaca cttttgtcgt cggccgatca aatactctcg ctcacgcggc
     1141 cgcaaagcag gtcgccggcg ccaagcgcgg cgatcccgtg atgttcaacc cgctgtacat
     1201 ccactccggc gtcgggctcg gcaagacgca tctattgcag gccgtgacct gggcgggaaa
     1261 cgccgcgggg gaacgcaagg tcctgtatct gactgccgag aagttcatgt acggatttgt
     1321 ctcggcgctt cgcacgcaga cggcgcttgc gttcaaagaa gcgttacgcg gcataggcgt
     1381 gctggtcatc gatgacctgc aattcctgca aggcaagtcg acgcaggccg aattctgcca
     1441 cacgctgaat gcgctcatcg acgccggccg ccaggtcgtc atcgcctccg atcgtccacc
     1501 ttcagatctg gagagcctgg atgatcgcgt gcgctcgcgc ctggccggcg ggctggttgt
     1561 ggaaatgggg ccgctcggcg aagagctgcg tttcgagatc ctgaaggctc gggtgttggc
     1621 tgcccgggcg caccaccctg ccttcgacgt gccgctgccc gtgctcggct acattgccaa
     1681 gacggtcacg cataacggac gcgatctgga aggagcactc aatcgccttc tcgcgcacaa
     1741 caagctgacc ggccacgccg tgacgctcga aatggccgaa cgcgaggtgc gcgatctgat
     1801 ccggccgcag gagccaaagc gcgtcaagat cgaggacatc cagcgcgtgg tagctcgcca
     1861 atacaatgtg agccgctccg acctgctgtc atcgcggcgc accgcgaatg tggtgaggcc
     1921 tcgacaggtc gccatgtacc tcgcgaagac cctcaccctg cgctcgctgc cggaaatcgg
     1981 ccggcggttc ggcggccgcg atcacacgac ggtcctgcac gcggtgcgca agattgaagg
     2041 cctggtcggc aacgacatgg ccttggccga agagatcgag atcctcaagc ggcaattgca
     2101 ggaataggct ggcacctagc aatggaggaa ggc
//
LOCUS       DATDHO010000428         5726 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_20447, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000428 DATDHO010000000
VERSION     DATDHO010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5726
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20447"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            991..1953
                     /locus_tag="VIY07_08300"
     CDS             991..1953
                     /locus_tag="VIY07_08300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020607779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6381791.1"
                     /translation="MRKFIMALALATIAANAQAQPFPSRQITLVVPFPPGGSTDVAAR
                     IMADRMRAPLGQPVIIENVGGAGGSIAVGRVARAAPDGYTIDIGQWDTHVGSIIYKLD
                     YDLQKDFEPIGLLSVNPQLLVARKDLPADNLKDLVAWMKANPGKINFVNQNAAANVSG
                     VLFEKLTGQKLHYIPYRGAGPAMTDLVAGQVDLLVVQGAAALPQIRAGKIKAIANLSP
                     QRSASIPDIPTSDEGGVPGLYMSGWFGFFAPKGTPKDVIATLNSAMVQALADPAVRAR
                     FTELGLDVASREQQTPEGLAGFQKAEIDKWWPIIKEAGISAQAQ"
     gene            2290..2874
                     /locus_tag="VIY07_08305"
     CDS             2290..2874
                     /locus_tag="VIY07_08305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381792.1"
                     /translation="MKPAPPRPAKPKSQSATTAKTAKLAPVAAKPEKPLAPQTPAPAG
                     ASEEKAGSKMTLQSAPSGQPSSVTTTTTVGTKMDAPVSGQPSETSNSILNKAKAKIAT
                     KMENAAAVEFVDAKRAIRKNTLGQPIDTICGHVKGKKPSGEEIGARQFLYLVKEDEAY
                     VVNGSQESVPATAYRNICTNVDSRIRNIRKQTRE"
     gene            3062..4171
                     /locus_tag="VIY07_08310"
     CDS             3062..4171
                     /locus_tag="VIY07_08310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ionic transporter y4hA"
                     /protein_id="HEY6381793.1"
                     /translation="MAAKTSSPAMTIAFPVLAIAFVFLAPFIGYDAGAQPLTSVSLAL
                     SAAMIVIMLGAVFAAVYHADVIAHRVGEPFGTLVLTLAVTIIEVALIESIVLTPGSSP
                     ALARDTVFAVIMIVCNGLVGLCILWGGLRHHEQEFQTAGAGVYLSLLAALSILTLVLP
                     NYTVTTIGPYFSNTQLIFVSIVTIILYIAFLFIQTSRHTEYFRAESATEPSGDHAYPS
                     GRDVAVSIVMLLLALCGVILIAKKFAVLLEIGLSRAGAPPAVSGIIIAIVVLAPESIT
                     AVRAAWHNQLQKSINLALGSSLATIGLTIPAVAITNIFIGKQIEIGLSSRDTLLLALT
                     LYLSLLTFGTGRTNILAGLVHLVVFATFLFLVFIP"
     gene            4447..4878
                     /locus_tag="VIY07_08315"
     CDS             4447..4878
                     /locus_tag="VIY07_08315"
                     /inference="COORDINATES: protein motif:HMM:NF012415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEY6381794.1"
                     /translation="MILALNAESLGDAMHGCRTFIAFVIFLCICPSALADSLNSFRRA
                     HGLSALHRSAGLQAMAQRHARSMAARQSMDHDGFYSERGPKGARAENVAWGCANESCA
                     MRMWENSSGHRANMLLSDVKSYGLASAAGGRTRYWCLVLGR"
     gene            5393..>5726
                     /locus_tag="VIY07_08320"
     CDS             5393..>5726
                     /locus_tag="VIY07_08320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHRD domain-containing protein"
                     /protein_id="HEY6381795.1"
                     /translation="MKTRILWACLPALACTAALALAVPSMAANVNLKADLKGSNEVPP
                     VDTKGTGSVTATYDTASKKLSWKGNVSGLSGPATAAHFHAGESGKNGGVVVPIAGADK
                     GTFEGSATL"
BASE COUNT         1170 a         1672 c         1656 g         1228 t
ORIGIN      
        1 tttttcagca acgctggcga atgccatccg cgcgaatagt cggccagcgc catgttcgcc
       61 gggaatgaga caatagaaaa aagagccgca ggccaagttg ttacggcggc tctttaagct
      121 tccacccacg ctgcgaggct ataggtgggc ggtcgcttat tcacaaacgt attcaaattt
      181 tgcatcgacg catttgcaaa agacacaata agcgcagcag atgccaaatg gggttcggcg
      241 cggaacctcc gctgttattt tgtccacagt tgcgcctcgg tcatagtggg catggggccc
      301 acatgcgaac gtgaatgttg agcggggctg gggtgaagct gccgcttgag ttgagcttgt
      361 cgccgtgggg ctaggcgtca agttcctcgc ttactgagcc gcgctggatc ctttcctccc
      421 ccagcgcggc tctttctggc gccacacgct gcgcgcttag agcgttccgt aaatagcgtg
      481 aatgcaagct ggcgctttcc gagtttcgat cttgacccag cgccaccggc ccatacatgg
      541 actgacctgt gctcccattg caggccaacg ctggaaaacg cgttgtgaca acaaaattcg
      601 tagttccagc ggcactcacg ctcgtcttga cctgtctgga ccattccgtc gccttcgcgt
      661 ggggggctgg cggcggagct cccggtattc ctggtttcag cgcgctttgg caggaaccaa
      721 agcccaaagc atctagccac ggaagaaaaa aaggctggag cgaaaattcg actagccgcc
      781 gggcgggtaa agcgaagaag aaagtgtggc gtgacgcggg tccgtcgccg gggccgcaca
      841 gccaataggc tcactcactc gactcgattg atccaaatcc tgcgcgctga agctcattcg
      901 gccatcagcg tggggccctg ctcgcgcgtc tggtggcgca aggactgacc tggctgtatg
      961 ctcggaacca cagatgcaac gggggatctc atgagaaaat tcattatggc gctggcgctg
     1021 gccacaattg ccgccaacgc gcaggcgcaa ccttttccat cgcggcagat aaccctcgtg
     1081 gtccccttcc cgcccggcgg ctcgaccgac gtggccgcgc gcatcatggc cgatcgcatg
     1141 cgggcgccac tgggacaacc tgtcatcatc gaaaacgtcg gaggcgccgg aggcagcatt
     1201 gcggtggggc gcgtcgcacg tgcggcaccc gatggataca cgatcgatat tggccaatgg
     1261 gacacgcatg tcggcagcat aatctacaag ctggattacg acctgcagaa ggatttcgag
     1321 ccgataggcc tgctgtcggt taacccgcag ctattggtcg ccaggaagga tttgcccgcg
     1381 gacaatttga aggatttggt cgcctggatg aaggcaaacc caggcaagat caattttgtc
     1441 aaccagaatg cggcagcgaa tgtaagcggc gttctcttcg agaagttgac cggccagaag
     1501 ctccactaca tcccctatcg cggagccgga cctgcaatga cggacctcgt cgccggccag
     1561 gttgacctgt tggtggtgca aggcgccgcc gcgctgccgc aaatccgggc cggaaagata
     1621 aaggcgatcg ccaatctgtc tccgcaacgc tctgcatcca taccggacat tccgacttcc
     1681 gacgagggcg gcgtgccggg actttatatg tcgggatggt tcggattctt cgcgccgaaa
     1741 ggcacgccga aagatgtcat cgccacgctc aatagtgcga tggtgcaggc tctggcggac
     1801 cccgcggtgc gtgcgcgctt taccgaattg gggctggatg tcgcctcacg cgagcagcag
     1861 acgccggaag gccttgcggg tttccaaaag gccgagatcg acaaatggtg gccgatcatc
     1921 aaggaggccg gcatcagcgc gcaggcacaa taacgccgtt tgcggttcca gtctgactcc
     1981 tgtggaactt ctgacctgtc ctaacagtat gccgggatta aaccatttcc ccaagtggtg
     2041 tcccggtagg gtgtcgggtt gaatctttct ggcttacacc cgaattggtg gggctggtcc
     2101 atgcgttgct ttgctgcggt gccgaacgtc gtcttcgcca ccccgttttg tcgccgaaca
     2161 cttttcgttg gcgcgctgtc cgtaaccttg gctggctgcg cttgttctgc gccgccgcag
     2221 gtggcgacgg acggatgcat ctcgccgggc tgtctccgca gaaccgcagc aatcgaggcg
     2281 ccgctcgatg tgaagccagc gccgccgcgt ccagcaaaac caaaatccca gtcggcaacg
     2341 accgccaaga cggcgaagtt agcgcctgtg gccgcaaagc ctgaaaaacc attagcccct
     2401 cagacgcccg cccccgccgg agcttccgaa gaaaaggcgg ggtcgaagat gaccctccag
     2461 tccgccccgt ccggccaacc gtcttcagta acgacgacga ccacagtggg gacgaagatg
     2521 gacgcgcctg tatcgggcca gccctccgaa acgtctaatt ccatcctgaa taaggcaaag
     2581 gccaagatcg ccactaaaat ggaaaacgcc gcggcggtcg agttcgtgga cgcaaaacga
     2641 gcgatcagaa aaaatacact cggtcagccc atcgacacca tctgtggcca cgttaaaggg
     2701 aaaaagccat cgggcgaaga aatcggtgcg cggcaatttc tctatctcgt caaggaagac
     2761 gaggcttacg tcgtcaatgg cagtcaggag tcggtgccgg cgaccgcata ccgcaatatc
     2821 tgtacgaacg tggattcccg cataaggaat atccgcaaac agactcgcga atgacttgcc
     2881 aaacgcgggc ttccctctga gacacgtcta gatttgaatc agaccgaatg ccttgagaga
     2941 tgcgcgcttg ttgcgcggta gtgcggggat gccgggcggc gccgaaatgt ccggtttcca
     3001 tgaaccggaa cgtttctgat aaagtgccct ccgaactatc caagccgaat tccagaagat
     3061 catggccgcg aaaacaagtt cgccagcaat gacgatcgca tttcccgtct tggcgatcgc
     3121 attcgttttt ttggcgccgt tcattggata cgatgccggc gcccagccgc tgacgtccgt
     3181 ttcgctcgcc ctttcggctg cgatgattgt catcatgctg ggggcggtat tcgcggctgt
     3241 ttatcatgca gacgtgatcg cgcaccgagt cggcgagccg ttcgggacgc ttgttctgac
     3301 gctcgctgtc acgattatcg aggtggcgct gatcgagtcg attgtgctga cgccgggcag
     3361 ctcaccggca ctcgcccggg acacggtgtt cgcggtcatc atgatcgtgt gcaatggcct
     3421 ggtgggcctg tgcatcctgt ggggtggatt gcgtcatcac gagcaggaat tccagaccgc
     3481 cggcgccggc gtctatctca gcctccttgc ggcactttca attctcactc tcgtgcttcc
     3541 caactatacg gtcacgacca tcggacctta tttctcgaac acgcaactga tttttgtcag
     3601 catcgtaaca attattcttt acatcgcctt tttgtttatc cagacgtcga ggcataccga
     3661 atactttcgc gccgagagtg ccaccgaacc gagcggtgat catgcatatc cttccggccg
     3721 ggacgtcgcc gtcagcatcg taatgttgct gctcgcactc tgcggagtca tcctcattgc
     3781 caagaaattt gcggtgcttc tggaaatcgg cctttcgcgg gccggcgctc cgccagctgt
     3841 ctcgggcatt atcatcgcaa tcgtcgtctt ggcgcccgaa agcatcaccg cggtgcgggc
     3901 agcctggcac aatcagttgc agaagagcat caatctcgcc ttgggctctt ccctggccac
     3961 gattggtctc acgattccgg ctgtggcaat taccaacatc tttatcggca aacagatcga
     4021 gatcggcctt tcatcccgcg acacgctgct cctcgctctg acgctctatt tgagcctgct
     4081 tacattcggg actggccgga ccaatattct tgccggccta gtccatctgg tggtttttgc
     4141 cacattcttg tttctggttt tcattcccta gctgcgcggc cattgtattc aaagtcccca
     4201 aaggccctct gtaaatctct gacgtacaat agaatctgcc ccgctaaatt ttgatggcgt
     4261 tatgtgagct agttcacaga cgtggtcgcg cgtggtgata gatgctgtag ttcgcggaat
     4321 gccgaactat ccctaactcg ggtgtccccc gtttcggcgc tccggaggga ccgctgtaac
     4381 ttggcaacag cggtcccttt gctttcgcct gattgtccga atttcgctga cgagcaatga
     4441 tgtgaggtga ttctcgcttt gaatgctgaa tcgctggggg atgccatgca tggctgccgg
     4501 acgttcattg ctttcgtcat tttcctgtgc atttgcccat ccgcgctggc tgacagtctt
     4561 aattcgttcc ggcgcgctca tggcctttcg gcgctgcacc gcagcgccgg tctgcaggca
     4621 atggctcagc gccacgcccg aagcatggcg gcacgtcagt cgatggatca cgatggcttt
     4681 tactccgagc gcggcccgaa gggggcgcgg gccgaaaatg tggcgtgggg atgcgccaac
     4741 gaaagctgcg ccatgcgaat gtgggaaaac tcctcgggac atcgcgcgaa catgttgttg
     4801 tccgacgtca aaagctatgg cctggcgtcg gccgccggcg gacgaacgcg gtattggtgt
     4861 cttgtcctcg gccgatagcg cttaacggaa agcgatgccc aggtgtcaac aattgttcgc
     4921 tgcagtgcac gcagcgtaaa caacaagatt caacagtgta atttctgcat aaaaactaaa
     4981 tgtacgaagt agatgtgtcg caaaagttta gcgctttggc cactacactt tcatcaaagc
     5041 gtcgcttcct tgccacgatg caccgctacc tgaccgccac ggaaggggag aaaggaaagt
     5101 cgtgacatgc atcttcatga atgctggacg aggctctcca ccgtccgttc tttcgcgacg
     5161 cctacgcgct gcccgcactg cggtgacctg atggtcgccc ccgtttcttc tgaattcgtg
     5221 gaaggcggcg aaatccgtca ccactgggaa tgcgacgcct gcggcgaact ttccagcaca
     5281 ttcattccgc tcgcacgcta ctgaacatcg taccggggag ccgctggaat atgcggctga
     5341 gtgcggtgtt tgcgggattg gtgtgcaccc agcactccaa ggaggagttc atatgaaaac
     5401 gaggattctg tgggcctgcc tgcccgcact cgcctgcacc gccgctcttg ctctcgcggt
     5461 cccatcaatg gcggccaacg tcaatttgaa ggccgatctg aagggctcca acgaagtccc
     5521 gccggtcgac accaagggca ccggttcggt gactgcgacc tatgatacgg cgagtaagaa
     5581 gttgtcgtgg aaaggcaatg tctcgggcct cagcgggccg gcaacggctg cgcactttca
     5641 tgccggcgaa tctggcaaga acggcggcgt cgtagtgccg atagcgggtg ctgacaaagg
     5701 cactttcgag ggctcggcaa cgctca
//
LOCUS       DATDHO010000429         2038 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_168866, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000429 DATDHO010000000
VERSION     DATDHO010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168866"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            306..1580
                     /locus_tag="VIY07_08325"
     CDS             306..1580
                     /locus_tag="VIY07_08325"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381796.1"
                     /translation="MRNWLRLGACLIAAGLTFVTADHATAQQPIRIGVLLPLTGPFAK
                     NGIENWEAIQIARDMINERGGINGQKIEFVNGDATSPAAAISETERLITKEGIKITTG
                     SFASPLAIAVSQASERHGVFHWETTGAAEIITRRGFKHTFQVGAPARRYGQVAVDFVI
                     EDLSKQLKKPISDLRVALLWENRAFGKSVGDGIRAYAESKNIKLVYDEGYDQFVTDMT
                     PIVQKLKDVKPDIVIAISFPNDAILFQRKAKELDFNVAAFIGVSAGYSSPDLRNSIGS
                     MVNGIFVADFPPKVNPNVLNPEIRKVADEFYKRYEAKMKRPPAGHASAGFSAIWALFT
                     HVLPKGKTFEPDELRDVALKLDLPEGSLVNGSGIKFTNFDWPDDPKDAGQNLRASIGV
                     WQWTPEGNEEVFPPKLATHAPIMIPLPAWSNR"
     gene            1641..>2038
                     /locus_tag="VIY07_08330"
     CDS             1641..>2038
                     /locus_tag="VIY07_08330"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381797.1"
                     /translation="MSTLGQLVLSGIFIGGIYALMSMGLTLIFGVLRVVNFAHGEFLM
                     LGMYGAWAITRLLDLNPYIAAIAIVPAMLLFGAIVHQLIVRPALDKPHLVVVFATMGL
                     SIFMQNVALMIMTADLWDVPPIFNRSVTIGP"
BASE COUNT          437 a          563 c          580 g          458 t
ORIGIN      
        1 aattggccga tgcaccgatc ccgttcggcg ccgtccggac gccgtctccg atgccgattc
       61 caggatgcga tatcattata gatatgtggg cattccagcc gcgtgcctga gacgccagcc
      121 cgcaacttcg cttcgttaca acgacgagga gacggctgtt ggtacgagcg gacgaaatga
      181 cgcgctagtc taaacgctta tagccgcttt ggatgggttg tatcgaaata atgcgattgc
      241 tgcgtgtcgc acccgttgat agcgttgagc cgagtacacg actatcaaac tagggaggga
      301 gccatatgcg caactggctg cgtctcgggg catgcctcat cgcggcgggt ttgacttttg
      361 tcacggccga tcatgcgacg gctcaacagc ctattcgcat cggcgtgcta ctgccgttga
      421 ccggaccgtt cgcaaagaac ggtatagaga attgggaagc gatccagatt gcgcgcgaca
      481 tgatcaatga gcgcggcggc atcaatggcc agaaaatcga gtttgtgaat ggcgacgcta
      541 cgagtccagc cgcagccatc agcgagactg aacgcctgat cactaaggaa ggcatcaaga
      601 tcaccaccgg ctcgtttgcg tcaccgcttg ctattgccgt cagccaagct tccgaacgtc
      661 atggcgtctt tcattgggaa acgactgggg cagccgaaat catcacgcgc cgcggcttta
      721 agcacacgtt tcaggtgggc gctccggccc gccgctatgg tcaggtcgca gtagatttcg
      781 tcatcgaaga tctgtcgaaa caactgaaga agccgatttc cgatctgcgt gtcgcgctgc
      841 tttgggaaaa tcgagcgttc ggcaaatcgg tcggtgacgg gattcgagcc tatgccgaga
      901 gcaagaatat caaactggtc tatgacgagg gatacgatca gttcgtcact gatatgacgc
      961 cgatcgtgca gaaactgaag gacgtaaagc ccgacattgt gatcgcgatt tcgttcccga
     1021 acgatgccat tctgttccag cgcaaggcca aggaattgga ttttaatgtt gcagcgttca
     1081 tcggagtcag tgcgggatac tcttctcccg acttgcgaaa ttcgatcggt agtatggtga
     1141 acggcatttt cgtcgccgac tttccgccga aggtgaatcc gaacgtgctc aatccggaaa
     1201 ttcggaaagt cgccgacgaa ttctacaagc ggtatgaggc caagatgaaa cgcccgcccg
     1261 cgggccatgc ttcagcgggc ttctcggcga tctgggcctt gttcacacac gtcctgccga
     1321 aaggcaaaac attcgagccc gacgaattgc gcgatgtcgc gctcaagctc gatcttccgg
     1381 agggttccct ggtcaatggc agcggcatca agttcaccaa ttttgactgg ccggacgatc
     1441 caaaggatgc cgggcagaat ttgcgcgcct cgattggggt gtggcagtgg acgccagaag
     1501 gtaatgaaga ggtctttcca cccaagctgg caactcacgc gccgatcatg attccgctgc
     1561 cggcatggag caaccgctga tcgcgtgggc tcgcagggaa tccacccctg cgagcctgtc
     1621 tcagcgttct cacgcccggc atgagcacac tcggtcaact cgtcctgtcc ggcatattca
     1681 tcggcggcat ttacgcactg atgagcatgg gactcacgct catctttggc gtcctgcgcg
     1741 tggtcaattt cgcgcacggt gagttcctta tgttggggat gtacggcgcg tgggccataa
     1801 caaggcttct cgacctcaat ccctatatcg ccgcgatagc aatcgtgccg gcgatgcttc
     1861 ttttcggtgc gattgtccac cagctgattg tccgccccgc gctcgataag ccgcatcttg
     1921 tcgttgtttt cgcgacaatg ggactttcga tctttatgca gaatgtcgcg ctgatgatca
     1981 tgacggcgga tctttgggat gtcccgccga tattcaatcg ttccgtcaca atcggacc
//
LOCUS       DATDHO010000430         2731 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_366616, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000430 DATDHO010000000
VERSION     DATDHO010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2731
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_366616"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(168..2234)
                     /locus_tag="VIY07_08335"
     CDS             complement(168..2234)
                     /locus_tag="VIY07_08335"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MASE1 domain-containing protein"
                     /protein_id="HEY6381798.1"
                     /translation="MNVFAPDAAIEGRRSGAPHEDWAKTFRNAVIVAVLYYVGAEIAF
                     LIGTLSDKIFAPFWPPNVVLFCALLLTPPRQWWLYILAAFPAHVAAELQIGMPATQLL
                     VAFATNCSVAVVNAFLLQRLQFDPPWFGSIRKATAYVFVAAFVSPALCAFGGAFVQIL
                     GGGSIENYGVYWARWYASNALGSLTLSPIALICIERMGSFSFTPTLRRVEAILVAAVL
                     AITCFFAFKEDTSIASGYVPALLYLPLPIIVWAAVRFGAAGASGVITVISLVLIWRTL
                     NGHNLFDVGNAEANVFAMQLFLIGLSCPVLLLGAAIEETRHAETVTREREERISFAAA
                     SSSVGLWQYDLAGEGFWATDYCRTLFGLPSGVPLDLDRLLNRIHPNDFPTAHAAFQSA
                     ITRAAPLEIEFRVQGRDRGYHWVSARAQPVFGDDGNATAMTGAFADATSRKMAEAEAD
                     MQRHEIAHLMRVSMLGELSGGLAHELTQPLTAILSNAQAGKILLAGGEKNLAEIDNIF
                     DDIITEDNRAGEVIHRLRGLMKKGEIKYEAVDMNELIASTLRLLHSELIGRRITIKDE
                     KAVDLPPAHGDPIQLQQVLLNLFVNAMDAMDGVAPSRRTITVSTAVTDEGGIDVRISD
                     CGMGLPRSQEHSVFQPFFTTKKRGLGLGLPICASIMKLHGGTLSLQNNVSEGATAIFR
                     LPPPDA"
BASE COUNT          626 a          803 c          776 g          526 t
ORIGIN      
        1 tcatgcgacg acagaaattc ctgcggagac gaaaatgact tcgtcttgaa gccggctgca
       61 ttcaaaaggc gagtaatcga tcgaaggacc gcgggatcat catccacaag gaacgtggta
      121 aaacccgctt cacgcatgac gccaccctca ccgcataaaa tcttagctca cgcgtccggc
      181 ggcggcagcc gaaatatagc cgtggccccc tcactcacat tgttttgaag cgagagtgtg
      241 ccgccatgga gcttcatgat cgaagcacag atgggaaggc caaggccgag gcctcgcttt
      301 ttggtggtga aaaacggctg aaagacgctg tgttcctgcg accgcggcaa ccccataccg
      361 cagtctgaaa tacggacatc tatgccgcct tcgtccgtca cggcggtgct gactgtaatg
      421 gtgcgccgcg acggtgcgac accgtccatt gcatccatcg cgttcacgaa aagattgagc
      481 agcacttgct gcaattgtat gggatcgccg tgtgccggcg gcaaatcgac ggctttttcg
      541 tccttgatcg tgatccgacg acctatcagc tcactgtgaa gaagccgaag ggttgatgcg
      601 atcagttcgt tcatgtcaac agcttcgtat ttgatctctc cctttttcat cagtccgcga
      661 agccgatgaa tgacttcccc ggcgcgattg tcttccgtga tgatgtcatc aaagatgtta
      721 tcgatttcag ccaaattctt ttcgccgccc gccagcagta tttttccagc ctgagcgttt
      781 gacagaatcg ccgtcagcgg ctgggtcaat tcgtgcgcga ggccgcccga taactctccc
      841 agcatcgaaa cacgcatcaa atgggcgatc tcatgccgct gcatgtcggc ttcggcttcc
      901 gccatcttgc gcgacgtcgc gtcggcaaac gctccggtca ttgcggtggc attgccatcg
      961 tcgccgaaaa ccggctgggc gcgggcggag acccagtggt agccacggtc ccttccctgg
     1021 acgcgaaatt cgatttccaa cggtgccgcg cgagtgatgg ccgattggaa ggctgcatgg
     1081 gccgtcggga aatcgttggg atgaatacga ttcagcaatc tgtcgagatc caggggaacg
     1141 ccggaaggca agccgaacaa tgtgcggcaa tagtcggtgg cccaaaatcc ttctcctgcg
     1201 aggtcatact gccagagacc cacgctggag gatgcggcgg cgaacgagat ccgctcttcg
     1261 cgttctcgcg tgaccgtttc ggcatgacgt gtttcttcga tggcggcgcc cagcagaagg
     1321 accggacagg ataagccgat caggaacagc tgcatggcga agacattcgc ttctgcattc
     1381 ccgacatcaa acagattgtg accgttcagg gtgcgccaga tcagcacaag gctgatcacc
     1441 gtaatcacgc cgctcgcgcc tgcggcgcca aagcgaacgg cagcccagac gatgattggc
     1501 aaaggcaggt acaatagcgc cgggacatag ccgctcgcga tcgaggtgtc ttctttgaac
     1561 gcgaagaagc acgtgatggc aagaactgcc gcgaccaata tggcctccac gcgccgaagc
     1621 gttggagtga acgaaaaaga acccatccgt tcgatgcata tgagtgcgat cggcgagagc
     1681 gtgaggctgc ccaacgcatt ggatgcgtac cagcgcgccc aatacacacc gtaattctcg
     1741 atcgacccac cgccgagaat ttgaacaaac gcaccgccaa aagcgcaaag tgcggggctg
     1801 acgaaagccg caacgaacac gtaggcggtc gccttgcgga tgcttccgaa ccagggggga
     1861 tcgaattgca aacgttgcaa aaggaacgca ttgaccacag ccacggagca gttcgtcgca
     1921 aaagcgacca acaactgtgt cgccggcatt ccaatctgca gctcggccgc aacgtgcgct
     1981 ggaaacgccg caagtatata gagccaccac tggcgcggcg gggtcagcag cagcgcgcaa
     2041 aacagaacga cgttcggcgg ccagaacggg gcgaaaatct tgtccgagag cgtgccgatg
     2101 agaaaagcaa tttcggcgcc gacataatag aggaccgcca cgatcacggc gttgcggaat
     2161 gtcttcgccc agtcttcgtg cggcgccccg ctccggcggc cttcaatcgc agcgtcagga
     2221 gcgaagacat tcatcggccg gcacccgatc acattaattt tatgcgcctg agattacagc
     2281 caatcgaagt caccgaaaat gcttgaaaaa gcggcgcgga catgcgttta ggcagacgtt
     2341 atgtaaccgc cacgttgcca cattggacct cggtccaatc gacaggacgg tcgcggcggt
     2401 ccagactgac aggctccaga gatccattgt ggtttgccag cctcatggac acgcgcgagg
     2461 cgacatcccc cctcctcccc gtccccagtc gcctcgcgcg ttggacgggg ttcttgtttt
     2521 tgcccgctta aattggacta cggtccaact cgacctcctg ttggcctcgc gcaaagcttg
     2581 ctgccatggg agcttacgta gagcttgaac cagaggtcga cctgcgccgt cacgacaact
     2641 ccagggctgg caatttcgac accgaagaca tgatccggat gatccggatt tccggcggca
     2701 cgttccgcat ggggtccgac aggcattatc c
//
LOCUS       DATDHO010000431         2898 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_168986, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000431 DATDHO010000000
VERSION     DATDHO010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2898
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_168986"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..502
                     /locus_tag="VIY07_08340"
     CDS             <1..502
                     /locus_tag="VIY07_08340"
                     /inference="COORDINATES: protein motif:HMM:NF044283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381799.1"
                     /translation="RHSIIKSANLWELLERARIGGITGVYRPESGAANLLTLISLKQT
                     YDGQSRQAAIVASQLLHPSHPTRYVIVVDDDIDVMNLEDVMWAVCTRSDPIRSITLID
                     HTRANFLDPMVRSRFDENAGHTSSCAVIDACRPFALRDRFPKVAESSPEFKKQIREKW
                     AGILKL"
     gene            520..2775
                     /locus_tag="VIY07_08345"
     CDS             520..2775
                     /locus_tag="VIY07_08345"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY6381800.1"
                     /translation="MAKFRVLGRPLQREDGKGKVTGEARFTADVIRPDMLWGKILRSP
                     LAHARIVNIDASRARNLPGVKAVITARDVSPTLTGRTLADLPILAIDRVRFVGDKVAA
                     VAAIDKDTAEEALTLIDVEYEELPAVFDPLEALKPGAPLIHPDYASYDAPETKAPDLR
                     NVQSVLRAKKGDIEKGFSESDKIFEHTFQTQMVHQGYIEPYACSVEIDAEGRILAWAS
                     TQSPFSARDQMARLLDLPKDRVILHPIVVGGSFGGKDHLIDIPIAYYLALAAGKPVRI
                     VRTYGEELLASAPRHPAIIFLRSGVKRDGRLWARDARVIYNGGAYGAFKPSPPAHMSG
                     ALTQGGAYQVPHTRLESLCVYTNQVPGGYMRASGELQTVFAAETHMDRIAGELGIDPL
                     EFRFLNALSEGDGNYSGFQYRDIKCREVLERARAAWTQPKLSPLKAGNSVGRGMALSC
                     RHVGQGQSEAEVLLGTDGNVRLVVGIIDQGAGVHVMQKQVVAEILGIKPERITVEVPD
                     TNHAPFHDGIKGQGATHVTGQAASRATHALIESMKARAAIHWQADPAGIDWRDGRVWL
                     RDGKKSLDLKQLASLAPGEPGRGFAYYDGRIRPREHIFQSVIADVEVDKESGQVQVRR
                     LTTFHDVSVVINSLTHQGQIEGGMLQGLGMAVCEEMLVEDGRVTTLSLGDYKIPTMRD
                     LPAHKTTLVSGATQGPGPFNAKPAAEHAITPIPPAIGNAVFNATGVRLVSLPLSAEKV
                     YEGLRVKEQEP"
BASE COUNT          593 a          887 c          875 g          543 t
ORIGIN      
        1 tcgccattcg atcatcaaat cggccaatct ttgggaattg ctcgagcgcg cccgaatcgg
       61 cggtatcacc ggtgtctacc ggcccgagtc gggcgcggca aatcttctga ccttgatcag
      121 tctcaagcaa acctacgacg gccagtcacg ccaggcggcg atcgtcgctt cgcagctgtt
      181 gcatccttct cacccgacgc gttacgtgat cgtggtcgac gacgatatcg acgtcatgaa
      241 cctcgaagac gtcatgtggg cggtgtgcac gcgcagcgat ccgattcgct cgattacgct
      301 catcgaccat acgcgggcga attttctcga tccgatggtg cgttcgcgtt tcgatgaaaa
      361 tgccggccac acgagctcct gcgcggtgat cgacgcctgc cgtccgtttg ccttgcgcga
      421 tcgatttccc aaagtggctg aatcgagccc cgagttcaaa aaacagatca gggaaaaatg
      481 ggccgggatc ttgaaacttt agaacaaccg gagtcatcga tggcaaaatt tcgcgttctc
      541 ggccgcccgt tgcagcgtga agacggtaag ggaaaagtca cgggcgaggc tcgttttacg
      601 gcggacgtta ttcgccccga catgctctgg ggcaagattc tacgcagccc cttggcccat
      661 gcgcgcatcg tcaatatcga cgcgagccgc gcgcgtaatc ttccgggcgt caaggcggtc
      721 atcacggcgc gggacgtcag tccgacgctc accggcagga cgctcgccga cctgccgata
      781 ctcgcgatcg atcgggtgcg cttcgtcggc gacaaggtcg ccgcggtcgc cgctatcgac
      841 aaagatacgg cggaagaagc gctgactctg atcgatgtcg agtatgaaga gctgccggcg
      901 gtcttcgatc ctttggaagc gctcaagccc ggggcgccgt tgatccatcc cgactacgct
      961 tcctacgacg cgccggagac caaggcaccc gacctgcgca acgtgcagag cgtgctgcgc
     1021 gcaaaaaagg gcgacatcga aaagggcttc agcgagtccg acaagatctt cgagcacact
     1081 ttccaaaccc agatggtgca ccagggttac atcgagccct acgcctgctc ggtggaaatc
     1141 gacgccgagg gaagaattct tgcctgggcc tcgacccagt cgccgttcag cgcgcgcgat
     1201 caaatggcgc gcttgctgga cttgccgaaa gaccgcgtca ttcttcatcc gatcgtcgtc
     1261 ggcggctcgt tcggcggcaa agatcatttg atcgatattc cgatcgctta ttatctcgcc
     1321 cttgcggccg gcaaacccgt gcgcatcgtg cgcacctacg gcgaggagct tctggcttcg
     1381 gcgccgcgcc atcccgcgat cattttcctc cgtagcggcg tcaagcgcga cggccgcttg
     1441 tgggcgcgtg atgcgcgagt gatttataac ggcggcgcct acggcgcgtt caagccgagt
     1501 ccgccggcgc atatgagcgg cgcgctcacc cagggcggcg cctatcaggt gccgcacacg
     1561 cggctcgaga gcctgtgtgt ctacaccaat caggtgcccg gcggctacat gcgagcctcg
     1621 ggcgagctgc aaacggtttt cgctgcggaa acccacatgg ataggatcgc cggcgagctc
     1681 ggcatcgatc cattggaatt tcgatttctc aatgcgctct cggaaggcga tggcaattac
     1741 agcggctttc agtatcgcga tataaaatgc cgcgaggtcc tcgagcgcgc ccgtgctgcc
     1801 tggacacagc cgaaactttc tccgctcaag gccggtaatt ccgtgggccg aggcatggcg
     1861 ctctcttgcc ggcatgttgg gcaagggcag tcggaagccg aggtcctgct cggcacggac
     1921 ggcaacgtgc gactggtcgt cgggattatc gaccagggag ccggcgtgca cgtgatgcaa
     1981 aagcaagtcg tcgccgagat cctcggcatc aagcccgagc gtatcactgt cgaagtgcca
     2041 gacacgaatc atgcgccgtt tcatgacggc atcaaaggac agggcgcgac ccatgtcact
     2101 ggccaggcgg cgtcacgcgc cacccacgcg ctgatcgaat cgatgaaagc gcgcgcggcg
     2161 attcattggc aagcggaccc ggctggaatc gactggcgcg acgggcgagt gtggctgcgg
     2221 gacgggaaaa agagcctgga cttgaagcaa ctcgcctccc tcgccccagg cgagcccggg
     2281 cgtggctttg cttattacga tggaaggatc cggccgcgcg agcatatctt tcaatccgtg
     2341 atcgccgacg tggaagtcga caaggagagc ggtcaagttc aagtcaggcg gctgaccacc
     2401 ttccatgatg tctcggtcgt gatcaattcg ttgacccatc agggccaaat cgaaggcggc
     2461 atgctgcagg gtttgggcat ggccgtttgc gaagagatgc tcgtcgaaga cggtcgcgta
     2521 accacgctca gcctgggcga ttacaagatc cctacaatgc gcgatttacc ggcgcacaag
     2581 accacactgg tcagcggcgc gacccaggga ccgggcccct tcaacgccaa gccggccgca
     2641 gagcatgcga tcacgccgat cccgccggcc atcggcaacg cggtcttcaa tgccaccggc
     2701 gtgcgcctgg taagtcttcc tctctcagca gaaaaagtct acgaaggatt gcgtgtgaaa
     2761 gagcaagaac cctgagaacc gatctgcagt gccagtcgcc acgcatcatg caatatacca
     2821 cggctcagtt cgctcactga tgggctaccg ctcacggcag agcgttacag atgaaattcg
     2881 cacgttgacg ctgcgact
//
LOCUS       DATDHO010000432         3155 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_169065, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000432 DATDHO010000000
VERSION     DATDHO010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3155)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3155)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3155
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169065"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1117)
                     /gene="ntrC"
                     /locus_tag="VIY07_08350"
     CDS             complement(<1..1117)
                     /gene="ntrC"
                     /locus_tag="VIY07_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HEY6381801.1"
                     /translation="MATGSILIADDDAAIRTVLNQALSRAGYEVRSTGNAATLWRWVT
                     QGDGDLVITDVVMPDENAFDLIPRIRKARPDLPIVVMSAQNTFMTAIRASERGAYEYL
                     PKPFDLKELIAIVGRALSEPKDPKPANTKTDEFEGIPLVGRSPAMQEIYRVLARLMQT
                     DLTVMISGESGTGKELVARALHDYGKRRLGAFVAINMAAIPRDLIESELFGHEKGAFT
                     GANTRSAGRFEQAEGGTPFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKSDVRI
                     IAATNKDLRLLIQQGLFREDLFFRLNVVPLRLPPLRERIEDIPDLIRHFFAQVQREGL
                     PPKQIDQSAVERLKRHRWPGNVRELENLARRLAALYPQ"
     gene            complement(1124..2269)
                     /locus_tag="VIY07_08355"
     CDS             complement(1124..2269)
                     /locus_tag="VIY07_08355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HEY6381802.1"
                     /translation="MRRAQALSEIVNTPADAMLHALPHPVILVSSDGKIADANVAAEQ
                     FFDASTSMLRRHMLRELVPFGSPLLALIEQVRQRGAAVNEYKVDLATPRNPGERLVDL
                     YVGPLPEYPDHVVVMLQERTIAAKMDRQLTHRGAARSVIALAAMLAHEIKNPLSGIRG
                     AAQLLEQSAVDDDRPLTKLICDETDRIVKLVDRMEVFADERPIDREPVNIHVVLDHVK
                     RLAQSGFARQIKFTEEYDPSLPPVLANRDQLIQVFLNLLKNAAEAIGETAADGEIQLT
                     TAFRPGVRLSVPGSKTRVSLPLEFCVKDNGPGVPEDLMPHLFDPFVTTKQSGSGLGLA
                     LVAKIVNDHGGIVECESQPRRTIFRVLMPIYSGDGELIDIPSPTKKR"
     gene            complement(2266..>3155)
                     /locus_tag="VIY07_08360"
     CDS             complement(2266..>3155)
                     /locus_tag="VIY07_08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEY6381803.1"
                     /translation="SEMTACAGLARGEREAAVRSDGAGIRIHVVQLAGCEAGWMAEGA
                     RIAEAQGADIIDINMGCPSKQVINGAAGSALMRDLDHAVSLIDATVSAVRVPVTLKMR
                     LGWDASTINAPQLAKRAEAAGIKLITVHGRTRCQFFQGQADWHAVRMVKAAVSIPIVV
                     NGDIRSCANAIDALAESGADAVMIGRAVQGRPWLPGQVARYLATGMSVGAPPLEEQFN
                     LIDALYDEMLRHHGTELGRRHARKHLGWALDSAAAAAGVPVTLLEEHRSRVLTTEEPA
                     RARRLLAEAYDDFSSRAAA"
BASE COUNT          600 a         1007 c          931 g          617 t
ORIGIN      
        1 cctgcggata gagcgccgcc agccggcgag ccaaattctc cagttcgcga acattccctg
       61 gccagcgatg gcgcttaagg cgctcgactg ccgactggtc gatctgcttc ggcggaagac
      121 cttcgcgctg gacctgcgcg aagaaatgac gaatcaggtc cggaatatcc tcgatccgct
      181 cgcgcagcgg cggcaatcgc agcggcacga cattgagcct gaagaacaaa tcctctcgaa
      241 acagaccctg ctgaatcagc agccgaaggt ccttgttcgt cgcggcgatg atccgcacat
      301 cactcttgat cggggtgcgg ccgcctaccg tcgtatactc gccctgctgc agcacgcgca
      361 gcaaccgcgt ctgcgcctcc atgggcatat cgcctatttc atcgagaaaa ggggtgccgc
      421 cttccgcctg ctcgaagcga cctgcactgc gcgtgttggc ccccgtgaat gctcccttct
      481 catggccgaa caattcggat tcgatgaggt cacgtggaat tgccgccatg ttgattgcaa
      541 caaacgcgcc caatcggcgc ttgccatagt catgcagagc gcgggccacc aactccttgc
      601 ccgtgcccga ctcgcccgag atcatcaccg tcagatcggt ctgcatcagc ctggcaagga
      661 cgcggtagat ttcctgcatc gccggtgagc ggcccaccag cgggatgccc tcaaactcgt
      721 cggttttggt atttgccggc ttcggatctt tcggctcgga taaggcccgg cccacaatgg
      781 cgatcaattc cttgagatca aaaggtttcg gcagatattc gtaggctccg cgttcggaag
      841 cacgaattgc cgtcatgaaa gtgttttgcg cgctcatcac gacgataggc agatcgggcc
      901 gcgccttgcg gatgcgaggg ataagatcga aggcgttttc atcgggcatg acgacgtccg
      961 tgatcaccag atcgccgtcg ccctgggtca cccagcgcca gagggttgcc gcattgccgg
     1021 tcgaccggac ctcatatccc gctcgcgaca gggcctggtt aagcactgtg cggattgcgg
     1081 catcgtcgtc ggcaattagg atgcttcctg tcgccataat ttctcaccgc ttcttcgtcg
     1141 gcgacgggat gtcaatgagt tcaccgtcgc cgctgtaaat gggcatcagc acgcggaaga
     1201 tcgttcgccg tggctgggat tcgcattcga cgattccgcc gtgatcgttc acgatcttcg
     1261 caacaagagc gaggcccaga ccgctgccgc tttgcttggt ggtgacgaac ggatcaaaca
     1321 aatgcggcat caggtcttcc ggcacgccgg gcccattgtc tttcacgcaa aactcgagag
     1381 gcagcgacac gcgagttttg ctgcccggca ccgagagacg cacgccggga cggaatgcgg
     1441 tggtcagctg gatctcgccg tcagccgcag tttcaccaat agcttcggct gcattcttga
     1501 gcaggttgag aaacacctgg atcagctggt cgcggttggc gagaaccggc ggcagcgatg
     1561 gatcgtactc ttccgtgaat ttgatctggc gggcaaaacc cgattgggcc aatcgcttca
     1621 cgtgatccag caccacatga atattgaccg gctcgcgatc gatcggacgc tcgtccgcaa
     1681 acacctccat gcggtcgact agctttacga tgcgatcggt ttcgtcgcag atcagcttgg
     1741 tcaacggtcg atcgtcatcg accgccgatt gctcgagcaa ctgtgcggcg ccccgaattc
     1801 cggaaagcgg gttttttatt tcatgggcga gcatcgccgc cagagcaata accgagcgcg
     1861 ccgctccgcg atgggtcagc tggcgatcca tcttggctgc gatggtgcgc tcctgcagca
     1921 tcacgacaac atggtccgga tattccggca gcggccccac atagagatca accagtcgct
     1981 cgccggggtt gcgcggcgtc gccaggtcga ccttgtactc gttgacggcc gccccgcgct
     2041 gccgcacctg ctcgatcaac gcgagcaacg gggatccaaa cggcaccagt tcgcgcagca
     2101 tgtgccggcg cagcatcgag gtcgaagcat caaaaaattg ttcggcggcc acattcgcgt
     2161 cggcgatttt tccgtccgat gaaaccaaaa tcaccggatg cggcagagca tggagcattg
     2221 catccgcggg cgtgtttacg atttccgaaa gagcctgcgc ccgcctcatg ctgcagccct
     2281 cgatgagaag tcgtcatagg cctcggcgag gagtcgtcgc gcgcgcgcag gttcttccgt
     2341 tgtcagaaca cgactgcgat gttcctcgag cagcgtcacc ggaactccgg cggcggcggc
     2401 cgccgaatcg agtgcccagc cgagatgctt gcgggcatgc cgacggccga gctcggtgcc
     2461 gtgatgcctg agcatttcgt cgtacagcgc atcgatgaga ttgaattgct cctcgagcgg
     2521 cggcgctcca acgctcatgc cggttgcgag atatcgcgcc acttgacccg gcaaccaggg
     2581 ccgcccctgc accgcacggc cgatcatgac cgcatcggcc ccggactcgg ccagcgcatc
     2641 aatcgcgttt gcgcaggagc gaatgtcccc gttcacgacg atcggaatcg aaacggccgc
     2701 ttttaccatt cggacggcat gccaatcggc ctggccttga aagaactgac aacgcgtgcg
     2761 gccgtgcact gtgatcaatt tgattccggc cgcttcggcg cgcttggcga gctgcggcgc
     2821 gttgatggtc gaagcatccc atcccagccg cattttcagc gtcacaggca cgcgcaccgc
     2881 cgaaaccgtc gcatcgatca ggctcactgc gtggtcgaga tcgcgcatga gcgccgatcc
     2941 cgcggccccg ttgatcacct gcttcgacgg gcaacccata ttgatatcga tgatgtcggc
     3001 gccctgcgcc tcggcaatgc gtgcgccttc cgccatccac ccggcctcgc atccggcgag
     3061 ctgcacgaca tggatgcgga tgccggcgcc gtcgctgcga acggctgcct cgcgttctcc
     3121 ccgcgccagg ccggcacaag cggtcatttc ggaaa
//
LOCUS       DATDHO010000433         2049 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_120252, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000433 DATDHO010000000
VERSION     DATDHO010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120252"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1650)
                     /locus_tag="VIY07_08365"
     CDS             complement(106..1650)
                     /locus_tag="VIY07_08365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010973074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HEY6381804.1"
                     /translation="MRALVAELQKRRAEAALGGSEKARERHVGRGKLLPRDRVMNLID
                     PASPFLEFSPLAGNGMYDDDIHGAGLITGIGRIEGRECVVVCNDSTIKGGTYFPMTVK
                     KHLRAQEIARENRLPCIYLVDSGGANLPHQTEVFPDREHFGRIFYNQATLSSLGIPQI
                     AVVMGSCTAGGAYVPAMSDETIIVQNQGTIFLGGPPLVKAATGEVVSAEELGGADVHA
                     RKSGVADHYAQDDHHALSIARRIVANLNTRKNVDIALIKSRDPALDAAELDGIVPVDL
                     KKQYDVREVIARIVDASEFDEFKALYGTTLIAGFAHIHGMPVGILGNNGILFSESALK
                     AAHFIELCCQRRIPLLFMQNIVGFMVGRDYEAGGISKDGAKMVTAVACAQVPKITLII
                     GGSYGAGNYGMCGRAYGPRFLFTWPNARISVMGGEQAASVLATVKRDNIEAAGSKWSE
                     VEEEEFKQPLREQFEHEGNPYYATARLWDDGIIAPSETRRVLALAFAAALNAPVPETK
                     FGVFRM"
BASE COUNT          425 a          621 c          598 g          405 t
ORIGIN      
        1 tgagatgctt ggccggtaaa cgggtggacg ccgactacgc gatctgaggg gcaagacaga
       61 ggcagtctcg cctggcgggc gcgatttctc ttgctttaca gcacctcaca tcctgaacac
      121 cccgaacttg gtttccggca cgggcgcatt aagtgcggca gcaaaggcga gtgccaacac
      181 gcggcgggtt tcggacggcg caatgatgcc gtcatcccaa agacgagcgg tggcgtaata
      241 aggattgcct tcgtgctcga actgctcacg cagtggctgc ttgaactctt cttcctcgac
      301 ttccgaccat ttgctgcccg ccgcttcaat attgtcgcgc ttgacggtcg ccaacacgct
      361 cgccgcttgt tcgccgccca tcaccgagat gcgagcgttg ggccatgtga acagaaagcg
      421 cggcccgtat gcccggccac acatgccata gttgccggcg ccataggagc cgccgatgat
      481 caacgtgatc ttcggcacct gcgcgcaggc cacggcggtc accatcttgg cgccatcctt
      541 ggaaatgccg ccggcctcgt aatcgcggcc gaccatgaag ccgacgatgt tctgcatgaa
      601 cagcaatgga atgcggcgct ggcagcaaag ctcgatgaag tgcgcagctt tcaacgcgct
      661 ctctgaaaac agaatgccat tgttgccgag aatgccgaca ggcattccat gaatgtgggc
      721 aaagcccgca atcagcgtcg tcccgtaaag tgccttgaac tcgtcaaact ccgatgcgtc
      781 cacgatgcgg gcgatgacct cccgcacgtc gtattgtttc ttcaagtcga ccggcacaat
      841 tccatcgagc tccgccgcat cgagcgccgg atcgcgcgac ttgatcaagg cgatgtcgac
      901 attttttctt gtattcaagt ttgcaacgat gcggcgcgcg atgctcagcg catgatgatc
      961 gtcttgcgcg tagtggtctg ccactcccga tttgcgcgcg tgcacatcgg cgccaccgag
     1021 ctcttccgcg ctgaccacct cgccggttgc ggccttcacc agcggggggc cgccgagaaa
     1081 gatggtaccc tggttctgga cgataatcgt ttcgtccgac atcgccggca cgtaggcacc
     1141 gcctgccgtg caggagccca tcacgactgc gatttgaggg atgcctaacg aagaaagagt
     1201 ggcctgattg tagaagatgc ggccgaaatg ctcgcgatca ggaaaaacct ccgtctggtg
     1261 cggcaggttg gcgccgccgc tatcgaccaa atagatgcag ggcaatctat tctcccgcgc
     1321 gatttcttgc gcgcgcagat gcttttttac cgtcatcgga aagtaggtac cgcccttgat
     1381 ggtggaatcg ttgcagacca ccacacattc ccggccctcg atgcgaccga tcccggtgat
     1441 caagccggcg ccgtgaatgt catcgtcata catgccgttg cccgcaagag gcgagaactc
     1501 gagaaagggc gaagcgggat caatcaggtt catcacgcgg tcgcgaggca gtagcttccc
     1561 gcgcccaaca tgtcgttcac gcgccttttc cgagccgccc aaggccgcct cggctcgtcg
     1621 cttttgcaat tcagccacca atgcgcgcat gcgttcggcg ttcgcgcgga aatcggcggc
     1681 gtttttgtcg atcgatgtcg agagaatccg caatgcgccc tcccctggca ggaaagtgcc
     1741 ttgatggaac cctgaacgca atggcacgtc attgcgattc cgtaatgttc ggaactgcgc
     1801 agtgccgcga gcgttttgtt ccgacaaggg ctcgagcatt cgggaattcg ggggaatcca
     1861 gaggaggcac aagtgaggaa agctaaatta ttatcgaccg ttgcagcggc attgctgtta
     1921 agcgccggca ctgcttcggc gcagatgacc aaagaggcgc ctgagcgcgc ccccgcgccg
     1981 cagcaaaatg cgccggccga gaaaatggcg ccatcgatga agagcgaaca gaaagcgccc
     2041 ccgacgact
//
LOCUS       DATDHO010000434         3652 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_120253, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000434 DATDHO010000000
VERSION     DATDHO010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3652
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_120253"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="VIY07_08370"
     CDS             <1..594
                     /locus_tag="VIY07_08370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017404442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding domain-containing
                     protein"
                     /protein_id="HEY6381805.1"
                     /translation="TPIIAMIKQVVAEGKRFRLFYCSRSPETTAFRDELGAPQFKDTV
                     RIHYDQGDPSRSLDLRPILAERKNREHLYCCGPRPLMEAVRAMTDHWSSTAVHFEAFS
                     EAETHKADDKPFNVTLARSGAVLEVPTTKTILEVLREHGLEVPSSCETGTCGTCRTKM
                     LAGEADHRDLVLADHERKDNIMICVSRARGEKITIDR"
     gene            complement(775..1095)
                     /locus_tag="VIY07_08375"
     CDS             complement(775..1095)
                     /locus_tag="VIY07_08375"
                     /inference="COORDINATES: protein motif:HMM:NF024834.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY6381806.1"
                     /translation="MKVLPPMLSTIALLAIGSTAEAQDPVSQGQRLVAEFCASCHAVG
                     PRGRSRHRGAPPFRMLGRSVDLDEFPRALERGITSSHPDMPDFKFSHDDALAVRAYLR
                     VIQQ"
     gene            complement(1118..1194)
                     /locus_tag="VIY07_08380"
     tRNA            complement(1118..1194)
                     /locus_tag="VIY07_08380"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1158..1160),aa:Arg,seq:tcg)
     gene            complement(1326..1559)
                     /locus_tag="VIY07_08385"
     CDS             complement(1326..1559)
                     /locus_tag="VIY07_08385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CstA-like transporter-associated
                     (seleno)protein"
                     /protein_id="HEY6381807.1"
                     /translation="MPDLQELFDQSASAVRAAGNWGTRAARLMIGVPDYETYVAHRRA
                     NHPDQPIMTYVEFFRERQQARYAIGKGRFRGCC"
     gene            complement(1552..3639)
                     /locus_tag="VIY07_08390"
     CDS             complement(1552..3639)
                     /locus_tag="VIY07_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HEY6381808.1"
                     /translation="MSLFNNSSAPQTKLLWIAVALLGAVSFAIVALNRGEAVNAAWLV
                     IAAICIYLIAYRFYGLFVANRALGVDGARPTPAVRHNDGLDYVPTNRYVLYGHHFAAI
                     AGAGPLVGPVLAAQMGYLPGALWILAGAVFAGAVQDMTVLFLSTRRDGRSLGDIVRGE
                     MGPVAGTITGIGILLICVIVLAVLALVVVKALVGSPWGTFAVFCTIPIALLMGVYNQF
                     IRPGRIGEMSLLGCVLLLAALIYGKTVSETPALAAYFDLKGETLALIIIGYGFVASVL
                     PVWLLLAPRDYLSTFLKIGTILLLAIGIIIVRPDLQMPAVTKFIDGSGPVWSGSVFPF
                     LFITIACGAVSGWHSLIASGTTPKMIENERQIAFIGYGGMLMESFVAIMAMIGASIIH
                     PGVYFAMNSGAGLIGTTAEQAAQVISSWGFVVTPEEITQMAKDVGETSIMSRTGGAPT
                     LAVGMAEILSSYLGGRALMGIWYHFAILFEALFILTTVDAGTRVLRFMIQDLVGNAIP
                     AFKETTSWTNNLIGSALSCALWGYFLYVGVIDPLGGIWTLWPLFGTANQMLAAIALTV
                     CTVVLFKMKRERFAWVTIVPATWLVVCTITAGLEKVFSPDPNVGFISHALKYGDALAA
                     GQLLAPAKTLGEMRRIVFNDYVDATLAAVFVLVVIATVIYGLISIRRALGNPQPTAME
                     IGLAGAAVGGRHA"
BASE COUNT          797 a         1120 c         1083 g          652 t
ORIGIN      
        1 acgccgatca ttgcgatgat caagcaagtg gtcgcggagg gcaagcgctt tcgcctgttc
       61 tattgctcgc gctcgccgga gacgacggcg ttccgcgatg agctcggcgc gccgcaattc
      121 aaggatacgg tcaggatcca ctatgaccag ggcgaccctt cgcgctcgct cgacctgcgc
      181 ccgattctcg ccgagcgcaa aaatcgcgag catctttact gctgcggtcc acgcccgctc
      241 atggaggcag tgcgcgcgat gaccgatcac tggtcgtcga ccgccgtgca tttcgaagcg
      301 ttcagcgaag ctgaaacgca caaggccgac gacaagccgt tcaacgtcac gcttgcgcgc
      361 tcgggcgcgg tgctcgaggt tccgaccacg aagacgattc tcgaggttct gcgcgagcac
      421 ggcctcgagg tgccgagctc gtgtgaaaca ggcacttgcg gcacctgccg caccaaaatg
      481 ctcgcaggtg aagcggacca ccgcgacctg gtccttgccg atcatgaacg caaggacaac
      541 atcatgatct gtgtctctcg cgcgcgtggc gagaagatca cgattgaccg ttaggatgat
      601 cgcctcgata ggcacttgta tagtcatggc cgggcttgtc ccggccatcc acgtcttttg
      661 attagtcacc gtgcaagacg tggatgcccg gcacataggc gtgcgaaagc acgccgtcct
      721 tcggacggct atggccgggc atgacgagca ttccagttgg gaatttagtg cgttctattg
      781 ctggatcacg cgcaaatagg cgcgcaccgc gagcgcgtcg tcatgactga atttgaagtc
      841 gggcatatcc ggatggctcg acgtgatgcc ccgttcgagc gcgcgcggga attcgtcgag
      901 atcgacactg cggcccagca tgcgaaatgg cggcgctccc cgatgtcgac tccgaccccg
      961 tgggcccacg gcgtgacagc ttgcgcaaaa ttccgcgacc agccgctggc cctgactgac
     1021 gggatcctgt gcctccgccg tgctgccaat ggcaagaaga gcgatcgtcg aaagcatcgg
     1081 cggcagtact ttcatcgggc tatccaatca gagggagtgg cgcgccggaa gggattcgaa
     1141 cccctgaccc ccagattcga agtctggtgc tctatccagc tgagctaccg gcgctttgga
     1201 tgggcgatat cagttagcgt ccgctttgcg taaaaaacgg accttcgtca atgcctttga
     1261 tgatgccaga caccctacac atcgtgtagc cgccagcggt caaccgcaga cccgttagta
     1321 gcctttcagc agcagcctct gaaccgacct ttcccaatgg cgtagcgcgc ttgctggcgt
     1381 tcgcggaaga actccacata cgtcatgatc ggctgatcgg gatggttggc ccgtcgatgc
     1441 gcgacatatg tctcgtaatc cggaacaccg atcatcagac gggccgcgcg cgtgccccaa
     1501 ttaccggcgg cccgcacggc gctcgcagac tggtcgaaca attcctgcag atcaggcatg
     1561 gcgacctccc accgctgctc cggcgagccc gatttccatt gcggtcggct gcgggttgcc
     1621 cagcgcccgc ctgatgctga tcaggccata gatcaccgta gcaatgacca ccagcacgaa
     1681 cacagccgca agcgtcgcat cgacgtagtc gttgaacaca attcgcctca tctcgccgag
     1741 cgtctttgca ggcgccagca actgacccgc tgccagagca tcgccgtatt tgagtgcgtg
     1801 gctgatgaac cccacgtttg gatcggggct gaacaccttt tcgagccccg cggtgatcgt
     1861 gcagaccacg agccatgtcg cgggcacaat ggtcacccac gcaaaccgct cgcgtttcat
     1921 cttgaagagg accacggtgc acaccgtcaa cgcgattgcc gccagcatct ggttggcggt
     1981 cccgaacaga ggccagagcg tccagatgcc gcccagcgga tcgatcacgc cgacgtagag
     2041 aaaatagccc catagcgcgc aagaaagcgc cgagccgatg aggttgtttg tccacgacgt
     2101 cgtctctttg aaagccggaa tcgcgttgcc gacgagatcc tgaatcatga accgtagcac
     2161 gcgcgttccg gcatcgactg tcgtgaggat gaaaagggcc tcgaacagga tcgcaaagtg
     2221 ataccagatg cccatcaggg cccggccgcc aaggtacgac gagaggattt cggccatgcc
     2281 gacggcgagc gttggtgcgc cgccggtgcg cgacatgatc gaggtttctc cgacgtcctt
     2341 cgccatttga gtgatctctt ccggggtcac cacgaaaccc catgacgaga tgacttgtgc
     2401 ggcttgctcg gccgtggtgc cgatcagacc ggccccgctg ttcattgcaa aataaacgcc
     2461 gggatggatg atgctcgcgc cgatcatcgc cattatggcg acgaacgatt ccatcaacat
     2521 tccgccgtag ccgatgaacg cgatctgcct ttcgttctcg atcatcttcg gtgttgttcc
     2581 cgacgcaatg agcgaatgcc atccggaaac ggcgccgcac gcgatggtaa tgaaaaggaa
     2641 cgggaacaca ctgccagacc agacaggtcc gctgccgtcg atgaacttcg tgacagcggg
     2701 catctggaga tcgggacgaa cgatgatgat gccaatggcg aggagcagga tggtgccgat
     2761 cttcaggaat gtggaaagat aatcgcgcgg ggccagaagc aaccagaccg gcagcacgga
     2821 tgccacgaaa ccgtagccga tgatgatcag cgcgagtgtc tcccccttta gatcgaaata
     2881 ggcagcgagc gcaggcgtct cggacaccgt cttgccatag atcagcgctg cgagaagcaa
     2941 tacgcagccg aggagcgaca tttcgccgat cctgcccggg cggatgaact gattgtagac
     3001 gcccatcaga agcgcgatcg gaatcgtgca gaacactgcg aacgttcccc acgggctacc
     3061 gaccagtgcc ttgacgacaa caagcgcaag gactgcaagg acgatgacgc aaatcagaag
     3121 aatgccaatg cccgtgatcg tgccggccac cggccccatt tccccgcgca cgatgtcacc
     3181 gagcgagcga ccatcgcggc gggtcgagag aaacagcacg gtcatgtcct ggactgcacc
     3241 ggcaaacacc gcgccggcga gaatccagag cgcgcccggc agatagccca tttgcgccgc
     3301 aagcactgga ccgaccaacg gaccggcgcc ggcgatcgcc gcgaaatgat ggccgtaaag
     3361 cacgtaccga ttggtcggga cgtaatcgag accgtcatta tggcgaacgg caggcgtcgg
     3421 tcgcgcccca tcgaccccga gcgcccggtt ggcgacgaac aacccataaa accgataagc
     3481 gattaaatag atgcaaatcg cggcgatgac gagccaggcg gcgttgaccg cttcacctcg
     3541 attgagcgcc acgatggcga atgatacagc gcctagaaga gccaccgcga tccataaaag
     3601 tttcgtctgc ggggcgcttg aattgttgaa gagactcatg ggacgttctc ct
//
LOCUS       DATDHO010000435         2151 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_416834, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000435 DATDHO010000000
VERSION     DATDHO010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416834"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(26..1129)
                     /locus_tag="VIY07_08395"
     CDS             complement(26..1129)
                     /locus_tag="VIY07_08395"
                     /inference="COORDINATES: protein motif:HMM:NF022515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2865 domain-containing protein"
                     /protein_id="HEY6381809.1"
                     /translation="MRQSRPCTLVAGGLVALTALSVAHAQSANPVCQRLEAQLASLDR
                     GNADPARAEQIRRSEEMVNRQQFEVDRLVVQSRRIGCESFGFFSIFSNPPPQCGGLMR
                     QLDQQRNALQRMRTDLEKLNGGTTERAAQRRGLLIALGDNGCGPQYRSAALAAQQGGF
                     WDRLFGDNGGGAIVSTPLGPMGGTFRTVCVRTCDGYYFPISYSTSPDRFREDEQTCQR
                     MCPASEVALYTYHNPGEEMAQAVSLGGRLYTELPTAFQYRKSMSPECSCRRSGESWAQ
                     ALKAIGPDDTVLPGDVVVTEQNAKQLSQPRVGTDGKPIRSDQRKPSTASPPATPSTAT
                     APANTPASETPPSPADPAKRSVRTVGPTFLPTR"
     gene            complement(1177..2049)
                     /locus_tag="VIY07_08400"
     CDS             complement(1177..2049)
                     /locus_tag="VIY07_08400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY6381810.1"
                     /translation="MPKNRIAYVVLWMVGALLSFSVMAVSIRELARGGLNIFEILAIR
                     SGVALLVLLILLGIRSDLRAYAKPRRMRLHFFRNTVHYASQFAWALSLTMLPLAMVFA
                     LEFTMPAWTALLAVWFLYERMTPSRFGVVVLGLIGVLVILRPGLADFNPAAILVLLAA
                     FGYAITMIATKKLTMTESTFSIIFWMAVIQFPLSLIGSDSDVLLNFEMRHILPAIGVG
                     TAGLTSHYCLSNAFRSGDATLVVPLDFMRIPLIAVVGWAFYGERLDIFVLLGALIIVS
                     GVLWNLRSEVARAH"
BASE COUNT          472 a          621 c          657 g          401 t
ORIGIN      
        1 cgttcgacta ttgaaggcca atcgactagc gagttggcaa gaacgtcgga ccgaccgtgc
       61 gaaccgaacg cttggctgga tcggccgggc tgggaggcgt ctcgcttgcg ggcgtgttcg
      121 caggcgccgt ggcagttgaa ggcgtagcgg ggggcgaggc agtagagggc ttccgctgat
      181 cggatcggat cggcttgccg tccgtcccga cgcgcggctg ggatagctgc ttggcattct
      241 gttcggtgac tacgacatcg ccaggcaaaa cggtatcgtc gggtccgatg gccttaagcg
      301 cttgcgccca gctttcgccg gaccgccggc agctacattc ggggctcatc gatttccggt
      361 attgaaatgc ggtcggcagc tcggtgtaaa gccggccgcc gagcgaaacg gcctgcgcca
      421 tttcctcacc gggattgtga taggtataga gcgcgacctc ggacgcagga cacatgcgct
      481 gacaggtctg ctcgtcctcg cggaatcgat cgggcgaggt cgagtatgaa atcgggaaat
      541 aatacccgtc gcatgtgcgg acgcagacgg tgcggaaagt tccgcccatg ggccctaacg
      601 gtgttgacac gatggcgccg ccgccattgt cgccgaacaa gcgatcccag aagccgccct
      661 gctgagccgc gagggccgcg gagcgatact gtggcccgca gccgttgtct ccgagggcaa
      721 tcaatagtcc gcggcgttgc gcggcgcgtt ctgtcgtacc gccgttgagt ttctcgagat
      781 cggtccgcat acgctgaaga gcatttcgct gctggtccaa ctggcgcatc agccccccgc
      841 attgcggtgg aggattgctg aagatcgaga aaaatccgaa gctttcacat cctatgcggc
      901 gcgactgtac gaccagccgg tcgacttcga attgctggcg gttgaccatt tcttcgctgc
      961 gccgaatttg ctcggcgcgc gccggatctg cattgccgcg atcgaggctg gccagctggg
     1021 cttcgagccg ttggcaaacc ggattcgcgg actgggcgtg cgcaacggag agcgccgtaa
     1081 gtgccaccag ccccccggcc accaaagtgc aaggtcgtga ttgcctcatt tgcgcgcatt
     1141 ttagtctgaa aaccctggtg gtgcgagcct ttgttgtcag tgcgctctgg cgacctcaga
     1201 acgcaggttc cacagcacgc ctgaaacgat aatcagggcg cccagcaaaa cgaaaatgtc
     1261 cagccgctca ccgtaaaatg cccagccgac tacggcgatt aatgggattc gcatgaaatc
     1321 caacggcaca accagggtgg catccccgga gcggaacgca ttgctcagac aatagtgcga
     1381 cgtaagtccg gcggtcccga cgccgatcgc cggcaggata tggcgcatct cgaagttcaa
     1441 caagacatcc gaatcactgc caataagaga cagcggaaac tggatgaccg ccatccaaaa
     1501 aatgatgctg aaagtcgact cggtcatcgt cagctttttg gtggcaatca ttgtgattgc
     1561 gtagccaaat gctgccagca gcacgagtat tgcggcggga ttaaagtcgg ccaatcctgg
     1621 ccggagaatc acaagcacgc caatcaaccc aagaacaacg accccgaagc ggctcggagt
     1681 catgcgctcg tataaaaacc acacagcgag taacgccgtc catgccggca tcgtgaactc
     1741 cagtgcaaac accatcgcaa ggggcagcat ggtcagactt agcgcccacg cgaactgcga
     1801 tgcgtagtgc acggtgttgc gaaaaaaatg tagtctcatt cgccggggtt tcgcataagc
     1861 gcgcaagtcc gacctgatcc cgagcaaaat gaggaggacg agaagcgcaa cgccgctgcg
     1921 gatcgcgaga atttcgaaaa tgttcaaccc accgcgggcc aactcgcgaa tcgataccgc
     1981 catcaccgaa aaggagagca atgcgccgac catccagagg acgacgtatg cgattctgtt
     2041 tttaggcacg tgagttcggt gtcggtgtga gccgtagggt cactcagcgt caggctggtt
     2101 ttccggccgc gctttgtcaa aggctgggag cttcatgcaa gcagcatcca c
//
LOCUS       DATDHO010000436         4070 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_20663, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000436 DATDHO010000000
VERSION     DATDHO010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4070
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20663"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VIY07_08405"
     CDS             complement(<1..295)
                     /locus_tag="VIY07_08405"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6381811.1"
                     /translation="MQLVVNIIVLGSIYALIACGYVLIYRVSRVLNLAHGELMMLGAY
                     LLLATASLFNGHPAIALAAAVLLSLLAGALVYVFLMRKMTGEMVLAAILTTVAL"
     gene            complement(364..1518)
                     /locus_tag="VIY07_08410"
     CDS             complement(364..1518)
                     /locus_tag="VIY07_08410"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381812.1"
                     /translation="MLKRILAGGLTAFAIALPAAAQDAYLVGITAALTGPPSSTYAPA
                     VDALRIYIDRVNASGGVNGKQIRLMIEDDGAQPSKAAANTKKLITQDNVILMVNASLS
                     STYAPVIAESKNANVPLLFASGVCPQSVYPPADPLQFCTTGYASQFDSRATLEFVKAA
                     AKGPVKIGFAAMAIPLSRGEMDYAMELSKKMGMDPVDQEVIPPPTADYTPFATKLKDA
                     GPNWVYSWAPWVTQVRTLEALRKLGWESDYIAWGHLEAEAELARLKDGKFYVINSNAL
                     FQEKQPIHQEIEAAATKAGSKFPAQTMTEGWIGGMAIEAALKAAGWPADPAKLRAAME
                     NLKIDTKGLRGGPIEWTKDNHFRTQLYYRIYKWDGDKIARVQDWKTYEVK"
     gene            complement(1556..3442)
                     /locus_tag="VIY07_08415"
     CDS             complement(1556..3442)
                     /locus_tag="VIY07_08415"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6381813.1"
                     /translation="MTATITVDRERLRRTTALHLLCERARATPDLVAFRSKQFGVYRE
                     RRWRDYATLVARYAGALQSLGLARGERAAIMGDVCEDWMLCDLAAQSLGAISYGIYPT
                     ASPAEVEYQMRDGGASIFVAENQEYVDKILSIVDRLPDLRAIVVIDDCAMFGYAHPKL
                     HRLRELLDKEHGPGLEWLEAKTSSLSAEDPAFIVYTSGTTGHPKGALVSHGKHLAATD
                     TVVTQYPTLREKPHRTVVFLPMCHVLGRDIAITLPLISRLVPHFGEDPEDFATTLFEI
                     APTVMFTVPRYLQKFGSHVLVSVLNSSRLKRAFYEAGMRVARDHVRRRWNGNSNAAGD
                     VLYGTVQALIFRPILNKLGFDKLELVVSGGAGLPAETAALWHMYGVNVVEMYGQTEEA
                     GGIIAGQRGRFPRPGNVGTPVEGLEVRLADDGEILVRGPDLFDRYWRADQATREVKGA
                     DGWLRTGDVGEWRDGSLRLIDRARDFIVTAGGKTISPSLIENALRASPYIAEAIVFGH
                     GKKYLTAVLEIDFDTVADWARANDVAYTGFTSLTAHPRVERLIRTELDKVNRDLARVE
                     QIKSFRILPKALDPEEEGEPVTPTRKVKRKLMYDRFKALIDAMYDDSEEQLIAASTGE
                     VLAS"
     gene            3567..>4070
                     /locus_tag="VIY07_08420"
     CDS             3567..>4070
                     /locus_tag="VIY07_08420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEY6381814.1"
                     /translation="MPSQGRPPFRADHVGSLLRPAVLRHAFRKHAGGEISDAEFIGLQ
                     DQCIREVVALQEQVGLQVVTDGEFRRGSYWGRFVERTKGFEIRPASFKFRDDSGHEVE
                     FTAPYAKERIERLQPLALDEFMFLRAATKVTGKITLPAPSTMHFYRCNDFADRTIYRD
                     VDAFFADL"
BASE COUNT          794 a         1218 c         1211 g          847 t
ORIGIN      
        1 caagcgcaac ggtcgtgaga atggccgcaa gcaccatctc gccggtcatc ttgcgcatga
       61 gaaaaacata gacgagggcg ccggcgagca agctcagaag aaccgcggcc gcgagtgcaa
      121 tcgccggatg gccattgaat aatgatgctg ttgcgagcag gagatacgcg cccagcatca
      181 tcagctcgcc gtgggcgagg ttcagcacgc ggctgacgcg atagatcagc acatatccgc
      241 acgcgatcag cgcgtagatc gatccgagca cgatgatgtt gacgacgagc tgcaaggcga
      301 ttgtctaaat ggagcagctg cgatcaccct ctccctggaa ggaagagggt gatgcaagca
      361 atgtcacttc acttcatagg ttttccagtc ctgcacgcgg gcaatcttgt cgccgtccca
      421 cttgtagatg cgatagtaga gttgcgtgcg gaagtggttg tccttggtcc actcgattgg
      481 cccgccgcgc agacccttgg tgtcgatctt caaattttcc atggcagcgc gaagtttggc
      541 cggatcggca ggccatccag cggctttgag tgcggcctca atcgccatgc cgccgatcca
      601 gccttcggtc atggtctgcg cgggaaactt cgatccggcc ttggtggcgg ccgcctcgat
      661 ctcctgatgg atcggctgct tttcctggaa cagcgcgttt gaattgatga cgtagaattt
      721 gccgtccttc agtcgcgcaa gctcggcttc ggcctcgaga tgaccccatg cgatgtagtc
      781 gctttcccag ccgagcttgc gcagggcttc cagggtgcgc acttgcgtga cccacggcgc
      841 ccatgaatag acccagttcg gtcctgcatc cttgagcttg gtcgcgaagg gcgtgtagtc
      901 ggcggtcggc ggcgggatga cttcctggtc gaccgggtcc atgcccatct ttttcgacag
      961 ctccatggcg tagtccattt cgccgcgcga caggggtatc gccatcgccg caaaaccgat
     1021 cttcaccgga cctttcgctg ctgccttgac aaactccagc gtcgcgcggc tgtcgaattg
     1081 cgaggcatag ccggtcgtgc agaactgcaa cgggtccgcc gggggataca cgctttgcgg
     1141 acagacgccg ctggcgaaca gcagaggcac attggcattc ttgctttccg cgatcacggg
     1201 cgcgtaggtc gacgacaggc tggcattgac catcagaatg acgttgtcct gggtgatcag
     1261 ctttttagta tttgccgctg ccttcgaagg ctgcgccccg tcgtcctcga tcatcagcct
     1321 gatttgcttt ccgttgacgc cgccagacgc attgacgcgg tcaatataga tgcgcagggc
     1381 atctaccgcc ggcgcatagg tgctcgatgg tggcccggtc agtgctgcgg tgatgccgac
     1441 caggtaagca tcctgcgctg cggccggcag tgcgatcgca aaagcagtca ggccgccagc
     1501 caatattctt ttgagcatga tgttcctccc tttttcatgt ccatgaattc tcgcgtcatg
     1561 aagccaacac ttccccggtg ctcgcggcga tcagttgctc ctcgctatcg tcgtacattg
     1621 cgtcgatcag cgccttgaag cgatcgtaca tcagcttgcg tttcaccttg cgcgtgggcg
     1681 tgaccggctc gccttcttct tccggatcaa gtgccttggg caggatgcgg aaggacttga
     1741 tctgctcgac gcgggcaaga tcgcgattga ccttgtcaag ctccgttctg atcagacgtt
     1801 cgacccgcgg atgcgcggtg aggcttgtaa aacccgtata agctacatcg tttgcacgcg
     1861 cccagtcggc gacagtatcg aaatcgatct ccaggacggc ggtgagatat ttctttccgt
     1921 gaccgaagac gatcgcctct gcgatatagg ggcttgcgcg caacgcattc tcgatcagcg
     1981 acggcgaaat cgtctttccg cccgcggtga caatgaaatc ccgggcgcga tcgatcagcc
     2041 gcaggcttcc gtcgcgccat tcaccgacgt cgccggtgcg aagccaaccg tcggcaccct
     2101 tgacctcgcg ggtagcttgg tcagcgcgcc aatagcgatc gaacagatcc ggtccgcgca
     2161 ccaggatttc tccgtcgtcc gccaggcgca cttcaagtcc ctcgaccggc gtgcctacat
     2221 tgccagggcg cgggaagcga ccgcgctgtc cggcaatgat gccgccggct tcttccgtct
     2281 gcccatacat ctcgacgacg ttgacgccgt acatgtgcca gagagccgcc gtttccgcag
     2341 gcaaaccggc gccgccgctg acgaccagct ccagcttgtc gaagccgagc ttgttcagga
     2401 tcggacggaa gatcaaagct tgcaccgtgc cgtaaagaac gtccccagcg gcgtttgaat
     2461 tgccattcca ccgccgacgg acgtgatcac gcgccacgcg catgcctgct tcgtaaaatg
     2521 cacgcttgag ccggctggaa ttcaacacgc tgacgagcac atgcgagccg aatttctgca
     2581 aatagcgggg aacagtgaac atcactgtcg gtgcgatttc gaacagtgtg gtggcgaaat
     2641 cctccgggtc ctctccgaaa tgcgggacca gccgcgagat gagcgggagg gtaatggcga
     2701 tgtcgcggcc gagcacatgg cacatcggca aaaaaacgac ggtccggtgc ggcttttcac
     2761 gcagcgttgg atattgcgtc accacggtat cggttgcggc gagatgcttg ccgtggctga
     2821 ccagcgcgcc tttcggatgg ccggttgtgc ccgaagtgta gacaatgaat gcagggtctt
     2881 cagccgacaa ggaagaagtc ttcgcctcaa gccattcgag gcctggcccg tgctctttgt
     2941 ccagcaactc gcgcaagcga tgcagcttgg gatgcgcata gccgaacatc gcgcaatcgt
     3001 cgataacgac gattgcgcgc agatcgggaa gtcggtcgac gatcgacagg atcttgtcga
     3061 catattcctg gttttcagca acgaagatcg aggctccgcc atcgcgcatc tggtactcga
     3121 cctcggccgg cgacgcagtc ggatagatgc cgtaggaaat tgcaccgagc gattgtgcgg
     3181 ccagatcgca gagcatccaa tcttcgcaga cgtctcccat gatcgctgcg cgctcgccgc
     3241 gggcgaggcc aaggctttgc aatgcacccg cgtatcgggc gaccaacgtt gcataatccc
     3301 gccagcggcg ctcgcgataa acgccgaatt gcttcgaacg gaaagccacc aaatcgggtg
     3361 ttgcccgcgc ccgctcgcac aagagatgca aagcggtggt gcgacgcaat cgttcgcgat
     3421 cgaccgtgat agttgcggtc atgcggtgcc cttgcttgcg cggcggttct gcccaatctt
     3481 atagttctgt cgaattgtag gttctatgtg cgggcaagca agcgccgggc atacaaatcc
     3541 cgaacctcag aatttccgga gcccgcatgc cgtcccaagg ccgcccacca tttcgtgccg
     3601 atcacgtcgg aagccttctg cggcctgcgg tcttacgtca cgccttccgc aagcatgccg
     3661 gcggggagat cagcgacgcc gaattcatcg gactgcagga tcaatgcatc cgagaagtcg
     3721 tcgcgctgca ggagcaggtc gggcttcagg ttgtaaccga cggagaattc cgccgcggtt
     3781 catattgggg acgtttcgtc gagcgcacca aagggttcga gatcaggccg gcctcgttca
     3841 agtttcggga cgatagtggg cacgaggtcg agtttaccgc gccttatgcc aaggagcgga
     3901 ttgagcggct gcagccgctg gcgctcgatg agttcatgtt cctgcgcgcg gcaacgaagg
     3961 ttaccggcaa gatcaccttg cccgcaccct ccaccatgca tttttaccgg tgcaacgatt
     4021 tcgccgatcg gacaatctat cgcgatgtgg atgcgttctt tgccgatctt
//
LOCUS       DATDHO010000437         2257 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_67083, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000437 DATDHO010000000
VERSION     DATDHO010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67083"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            278..934
                     /locus_tag="VIY07_08425"
     CDS             278..934
                     /locus_tag="VIY07_08425"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HEY6381815.1"
                     /translation="MQTWKTFLRNHMEGIASIDLFVVPTIAFQQLFALLVLRHERRQL
                     LWFAVTRNPTAEWLARQITEAFPWDGAPKYLIRDNDRAFGVAFKARVRAMGIRDRPTS
                     LRSPRQNGYVERLIGSIRRECTDHLIVLSEEHLRRILVRYATYYNGSRIHRSLNKDAP
                     FSRAIEHLGVITSLPSGRCPLLGPDFHQLDLVLDAPPANLRRLGAHSDDVARPPAGAQ
                     "
     gene            complement(876..1904)
                     /locus_tag="VIY07_08430"
     CDS             complement(876..1904)
                     /locus_tag="VIY07_08430"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integrase core domain-containing protein"
                     /protein_id="HEY6381816.1"
                     /translation="MGSILFAVVSLFTFRFRSRASLEIELIAVRHQLAVLRRQRPGRP
                     QLSSLDRLLWVWLYRIWPQAIDAMVLVKPATVVQWHRKGFRFHWRWRSRRPGRPKIGT
                     EIRALIRRMSRANPLWGAPRIHGELLKLGIKISQATVGRWMPWRPKVPSPTWRSFLRN
                     HLPDIAAIDMFVVTTATFRLLYTLIVLSLDRRRVVHFEVTANPTQDWLSGQMTEAFPW
                     DTAPRYLLRDRDKSYGPAFRHRVRAMGITEVITAARSPWQNPYAERLIGSIRRECLDH
                     VIILSERHLRRVLSSYFHYHHNARTHLSLDKDCPRPRAVQLPSTGNNIIALPQVGGLH
                     HRYERRAA"
BASE COUNT          440 a          654 c          724 g          439 t
ORIGIN      
        1 gccgctgtcc acgcattctt gacgccataa ccattgtcag gcctgagacg gtcgtgcgtt
       61 ggcatcgaaa gggttttgcc gcctactggc gatggcggtc ccggtcgccc ggcggccggc
      121 cgcggatcgg caaagaggtg cgcgatctga tccgaagaat gagccttgag aactcgctgg
      181 gggcgccacc aagatccacg gcgagctgct caagctcggc atcgaggtcg cccagtccac
      241 ggtttcgatc tatatggtgc cgcggcagga tcgaccattg cagacctgga agaccttcct
      301 tcgcaatcat atggagggga ttgcgtcgat cgatctcttt gtcgttccga cgattgcgtt
      361 tcagcaactg ttcgcattgc tggttctcag gcacgaacga cggcagctat tgtggttcgc
      421 ggtgacccgc aatccgacgg ccgagtggtt ggcgcgccag atcactgaag cgtttccgtg
      481 ggacggcgcg ccgaagtatc tcattcgcga caatgaccga gcattcggcg ttgcattcaa
      541 ggcccgggtc cgagcgatgg gtatccggga ccggccgacg tcgttacgct cgccccggca
      601 gaatggatat gttgagcgct tgatcgggtc gatccgacgc gagtgcactg atcatttgat
      661 cgtgttaagc gaggagcacc ttcggcgaat tcttgtgaga tacgccacct attacaacgg
      721 gtcgcgaatt catcgctccc tcaacaaaga tgctccattt tcccgcgcga ttgagcacct
      781 cggcgtcatc acatcgctac caagcgggcg ctgcccctta cttgggccgg acttccacca
      841 gctggatcta gtattggacg cgccgcctgc caatctcagg cggctcggcg ctcatagcga
      901 tgatgtagcc cgcccacctg cgggagcgca atgatgttgt tgcctgtgga gggtagctgt
      961 acggcacgag gccgtgggca atccttgtcg agcgaaagat gcgttctcgc gttatgatga
     1021 tagtgaaaat agctcgacag cacgcggcgc aggtgacgct cgctgaggat gataacgtga
     1081 tccagacatt cgcggcggat cgagccgatg agacgctcgg cgtagggatt ctgccagggc
     1141 gatcgcgccg cagtgatgac ctcggtgatg cccatcgcgc gaacgcgatg ccggaatgcc
     1201 gggccatagg atttgtcccg gtcccgcagc aaatagcgtg gtgccgtgtc ccacggaaac
     1261 gcctcggtca tttggccgga aagccagtct tgcgtaggat ttgcggtgac ttcgaagtga
     1321 acgacccgcc tgcgatcgag gctgagcacg atcaaggtat aaaggagccg gaacgttgcc
     1381 gtggtgacca caaacatgtc gatcgccgca atgtcgggaa ggtggttgcg caggaagctg
     1441 cgccaggtcg gggaggggac cttggggcgc cagggcatcc agcgcccaac cgtggcctgg
     1501 ctgatcttga tgccgagctt gagcagttct ccgtggatgc ggggcgcccc ccacaatggg
     1561 ttggccctgc tcatacggcg gatcaaagca cggatttctg tgccgatctt gggtcgtccc
     1621 ggacggcgtg atcgccagcg ccagtgaaac cggaagccct tgcgatgcca ttgcaccacg
     1681 gttgccggct tgaccagtac catggcgtcg atggcctgcg gccagatccg gtagagccac
     1741 acccacagga gccgatcgag cgacgaaagc tgaggccggc cgggccgctg ccgccgcagc
     1801 acggccagct gatgacgcac ggcaatcagc tcaatttcca gcgaggcgcg gctgcgaaaa
     1861 cggaaggtga agagcgaaac aacggcgaag agaatcgacc ccatgaccgc gacggtacgg
     1921 ttggccggcg aaaatcacca gcctttctcg gccctgtgga gatttgagca gggacaggcg
     1981 tattgcgtcg gctctggtcg tactcatctg cgaatctcct taattcgata gttcgcttgg
     2041 acgtgcgcct gcctgctgcg gccacgtagg aacgaaagga caaggtcgcc tacgggtcaa
     2101 gggtggcggt cccatgacgc tcgcgcttgg tccgctctac cctcaactgc ggctgtgatg
     2161 gtgcagcgcc gcgaatggca gagtcgtgcc atgagccgac ctgagcaggt gcagcaacat
     2221 tcggtgcgag gaccagtgtt attcgatcac ctcgtcg
//
LOCUS       DATDHO010000438         3367 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_169208, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000438 DATDHO010000000
VERSION     DATDHO010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3367
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169208"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(672..935)
                     /locus_tag="VIY07_08435"
     CDS             complement(672..935)
                     /locus_tag="VIY07_08435"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381817.1"
                     /translation="MAFSIKLYSGLLLVYLFFNGPRRATAAAAATVFILWLGLPVGLF
                     GTDGTLRLYSGWSDQVRTIGDPSLHASLATRAGGPPIVSLKKQ"
     gene            complement(919..1461)
                     /locus_tag="VIY07_08440"
     CDS             complement(919..1461)
                     /locus_tag="VIY07_08440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381818.1"
                     /translation="MRSGFGGRFIEAGQKPVIAALSGCGIALYLAYHLTRFQVSAVWP
                     LAPRGDASIIFDQAHAIFERAAYPSSAIFPYPPSAVLIFYGLCIGGPAVFMTAWYFLM
                     AAGLIVCLRASLVQERNETRAAWLLVGLVAILIADAPISWDLRNANSNLICIGLVMAG
                     YALVASAGAGGNFCCLGIFN"
     gene            complement(1458..2258)
                     /locus_tag="VIY07_08445"
     CDS             complement(1458..2258)
                     /locus_tag="VIY07_08445"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY6381819.1"
                     /translation="MILQSASISRTSDTLVFAPTFNERQTIGPLLDDLLSLPGRFDVL
                     IVDDLSCDGTAEYLTGRAAIDPRLRLIMRPGKFGVGSAHKLAWLQARQYGYSRLVTLD
                     ADLSHDPQDVSRVLALLDGGADVAFGSRFLPGGRLDYSGWRLFVSRNANRVARLLLHL
                     PITEYTNSLRAVRLQCIPPGLVESIADDGYAFFLNSAAQFARHGLTIREIPIHFRDRQ
                     AGVSTISKREILRAMITLIWLTFDRRAAIPMPLPKSHDHSDDVRMSIP"
     gene            2811..>3367
                     /locus_tag="VIY07_08450"
     CDS             2811..>3367
                     /locus_tag="VIY07_08450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381820.1"
                     /translation="MPSAPTAPVPKTAQERRPGSDFSSWPEPVPEPPPPPHRLEDGTS
                     PLVGRIALVVTFAAVVALVLIFAKPISQGAHTLFDTASRAVQTSKSIDLLTPTNVPSN
                     DPVAPATRVAAASASPPPAAAPAAQPAPASVGQSAPANQQVTLSTPAQPLGQEPTAVK
                     TTFRGVTDKEIRFGISAALSGPTKEL"
BASE COUNT          784 a         1012 c          975 g          596 t
ORIGIN      
        1 atcgctccgg cgaccgtttc ttcgcgctga caggacatga attcgcgctc ccggtcacgt
       61 ccccacgcct ccccgtcccc agaccgggtt cgcgagcggc cgggcctccc ccagggcccg
      121 gccgcacact ggacgcctcg cgatttctct atctgtttga ccgcgctgat tgagtcgtaa
      181 ttgcgcttgc cgaacgttgc ccggcgcgct ttgcccgaac cacgctacgg tggccgctgg
      241 tgcgtttgct tcgcaagtcg gggacgcacg caagcaagcg cgagaacgag tgccaaaaac
      301 tgcggaccta acccaaaacc ccgaaaaccg aacggtacct tgacgacgat gaaaaataag
      361 agtgccgcca ccgcggcgag cactatcatt cggtcgcttt gcaattggtg atcatccaac
      421 gcaactgccg cgcacagcag tacagcaacc aggacaggga cagcgtgata tggctcgagc
      481 cacgggctga acggcaatgg agcaagcata agcacaaccc agtccgccag tgcagcccga
      541 gagggaatcg gcacaaaagg tccctcggca acgccacgca tatacgagca acgccgcaag
      601 ccagatggtt tcaattgcca atagccacgc gcgcgttgtg tcggatccga attctgcgcc
      661 ggtgagattc actactgctt tttgaggctt acaatcggcg gacctccagc cctagtcgcg
      721 agacttgcat gcagggacgg atcgccgatg gtccgcacct ggtcgctcca gccggagtaa
      781 agtctcagcg tgccgtccgt gccgaacaag ccgaccggca atcccagcca gagaatgaaa
      841 acagttgccg ccgcggcggc ggtggcgcgt cttggcccgt taaagaacag atagaccagc
      901 aggagtccgc tgtagagctt aattgaaaat gccaaggcaa caaaaattcc cgccagcacc
      961 ggcagacgcg accagcgcgt agcctgccat cacaaggccg atacatatta ggttgctgtt
     1021 ggcattgcgg aggtcccacg aaattggcgc atcggcaatc aagatggcga cgagcccaac
     1081 cagaagccat gctgcacgcg tttcattgcg ctcctgcacc agacttgcac gcagacacac
     1141 aatcagtccc gctgccatca aaaagtacca tgccgtcatg aagaccgcgg gcccgccgat
     1201 gcagaggccg tagaagatca gaacggcaga gggcggatac gggaaaatcg cgctcgacgg
     1261 atacgctgcc cgctcgaaaa tggcatgcgc ctgatcaaag atgatcgacg catcccctcg
     1321 cggagcgagt ggccataccg cagacacctg gaaacgcgtg agatgataag caagatatag
     1381 cgcgatgccg catccggaga gagcagcgat aaccggtttc tgtccggctt cgataaaacg
     1441 accgccgaac ccggacctca tggaatcgac atccggacgt catccgaatg atcgtgagac
     1501 ttgggcagtg gcattggaat cgcggcacga cgatcgaacg taagccaaat caatgtgatc
     1561 atcgcacgca gaatttcgcg cttggagatc gtcgaaacgc cggcttgtcg gtcgcgaaaa
     1621 tggatgggaa tttcgcgaat ggtcaggccg tggcgagcga actgagccgc gctgttgagg
     1681 aaaaaggcat atccatcgtc tgcgatgctt tcgacaagtc ccgggggaat gcattgcagg
     1741 cgtacggctc gcaatgaatt cgtgtattca gtgatcggca gatgcaacaa taggcgcgca
     1801 acacgattgg cgttgcggct cacgaacagg cgccagccgc tgtagtcaag acggccaccg
     1861 ggcaaaaatc gcgatccgaa cgcaacatct gcacccccgt cgagcagggc taaaacacga
     1921 gaaacatcct gcggatcgtg cgagaggtca gcgtcgagtg tgacgagacg tgagtagccg
     1981 tattgccgcg cctgcaacca tgcgagcttg tgagccgatc cgacgccgaa tttgcctgga
     2041 cgcatgatca gccgcaggcg gggatcgatg gcggcacgcc ccgtcaaata ttcggccgtt
     2101 ccgtcgcaag aaagatcatc gacgatgagc acgtcgaagc gccccggcaa actcaggagg
     2161 tcatcaagca aaggaccgat cgtctgtcgc tcgttgaagg tcggagcgaa gaccagggta
     2221 tcgctggtgc ggctgatgga agcagattgc aagatcatac gaagttcaga gtcgcacggt
     2281 gaaagggctt aggccgccaa gtgttgaggt acggcatcgt aacgagccca agtcgacctc
     2341 gtaaaccgag agaaaacccg cttcgaccct gttcgcggtc acttcggaaa cctttgtact
     2401 gaaaaatcat gcggcggcgc ggcttttccg cgcccggctc tttggcaagc atgaaaattt
     2461 ggcggaaaac aaccgcattc gcgaccgtga tgccacggct caaactttta atttttttcg
     2521 cattgctcga cagtgcaaga gcgtgcgaaa ttcgattggg acgatgcacc tgccccttcg
     2581 ccgtctgtct cactttgaca cgcagaggct gcaaggtacg ttactaccgg acgaaaaggg
     2641 actactggtg ctagtctttg aaacgtctca gcattcctgc ggtgacgagt agcgcgtgag
     2701 aggcaatcat gagtggtaca actcgggacg acgaaccatc cgattacagt aggtatgcgc
     2761 caagacggtt tcgcgaccca gcaacgccgt ctaccaccga aagaccgttc gtgccctctg
     2821 cgccaacggc accggtgccc aagaccgccc aagagcggcg gccaggatcg gatttttcct
     2881 catggccgga gcctgtcccg gagccgccgc ctccgccgca tcgactggag gatgggacgt
     2941 cgccattggt cggccggatt gcgctggtcg ttacatttgc ggcggtcgtc gcattggtgc
     3001 tcattttcgc aaagcctata tcgcaaggcg cgcatacgct cttcgatacg gcttcgcggg
     3061 ccgtccagac ctccaaatca attgacctgc tgacgccgac aaacgtccca tcaaacgatc
     3121 cggtcgctcc ggcgacgcgc gttgccgcgg cttcggcttc accgccgcct gcagcggcgc
     3181 cggctgcgca gcccgcgccg gcttccgtcg gccagtcggc cccagccaat cagcaagtga
     3241 ccttgtcaac acctgcacaa ccgctcggcc aagagccgac ggccgtcaag acaacgttcc
     3301 gcggcgtgac tgacaaagaa attcggtttg gaatttcggc ggcattgagt ggtccgacca
     3361 aggaact
//
LOCUS       DATDHO010000439         2652 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_463498, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000439 DATDHO010000000
VERSION     DATDHO010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2652
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463498"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="VIY07_08455"
     CDS             complement(<1..222)
                     /locus_tag="VIY07_08455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEY6381821.1"
                     /translation="MLGPTTANIDLIKAAVLGIVEGLTEYLPVSSTGHLLLLEHVFGW
                     GDDDFGKSFAILIQLGAILALLTIYFGRIW"
     gene            430..1122
                     /locus_tag="VIY07_08460"
     CDS             430..1122
                     /locus_tag="VIY07_08460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY6381822.1"
                     /translation="MLTLFHQPLCPHSRYVRLILGEYGIAARLVEERFWERREEFLLL
                     NPAAELPVLVTDGEPPIPGAAIVAEYIEETGLVGNGADRLLPSQPGPRVEVRRLANWF
                     NNKFHAEVSGPLVNERAFKRHMTEEQGGGPPSTEALRAARQNIRYHLAYIGWLVRTRD
                     WLAGDRLSLADLAAAAHLSAADYLGEVPWNEDEATKNWYARIKSRPSFRAILADTQAG
                     LPPSKTYADLDF"
     gene            1119..2243
                     /gene="queG"
                     /locus_tag="VIY07_08465"
     CDS             1119..2243
                     /gene="queG"
                     /locus_tag="VIY07_08465"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEY6381823.1"
                     /translation="MKDPAAIKAALAEKARLHGFDAFGVAGPDDMPELKSRLESFLAD
                     GAHGDMTWLASTANRRASPQVMWPEARSIIMLGMNYGPEDDPLAILKMRTHGAISVYA
                     KGDDYHDIIKARLKELARWLIANAGGQVKIFVDTAAIMEKPLAAQGGLGWQGKHTNLV
                     SRQYGSWLFLGSIFTTLDLPHDSPESDSCGSCRACLDICPTAAFPAPYRLDARRCISY
                     LTIEHKGPIPRELRAAMGNRIYGCDDCLAVCPWNKFASYGREAKLAARETLRAPSLAD
                     LVRLDDAQFRALFSKTSIKRTGRDRFVRNVLIAIGNSGDGALALEAERLLGDASPLVR
                     GAAVWALSKLLPRAEFEGLASRRQNESDPDVREEWAAALA"
     gene            complement(2240..>2652)
                     /locus_tag="VIY07_08470"
     CDS             complement(2240..>2652)
                     /locus_tag="VIY07_08470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6381824.1"
                     /translation="ERPGAAPIAGMVLIAPAVDFTEELMWKQFPDAARQQIEQMGVWM
                     RPSAYGEEPYPITRALIEDGRRHLLLGGLIETRCPVHILQGVEDPDVPWRHAIELVSR
                     FSRDDVVLTLIKDGDHRLSRPEDIERLIGAVKEF"
BASE COUNT          545 a          804 c          775 g          528 t
ORIGIN      
        1 ccagatcctg ccaaaataga tcgtcagcag cgcgagaatg gcaccgagtt gaataaggat
       61 cgcaaacgat ttgccaaaat catcgtcccc ccatccgaac acatgctcca aaagcagcaa
      121 gtgccctgtc gatgaaaccg gcagatattc cgtcagtccc tcgacgatac cgagaacggc
      181 cgctttgatc agatcgatat ttgccgttgt cgggccaagc atggccaccc tgatggattc
      241 catgaaatgc tccgaaggat ttgcgcccct gctgacgcga tgatgtaggc cagcgctttt
      301 ggcctaaagg tactgacgaa gcaacgaaaa aagacggtaa ttcttggtgg tttgcacgtc
      361 agtggcagct ttctatagtg cagatgctga ttctctccgt gaacggcgcg cgccgcttct
      421 tcgcacgtga tgttgacact ttttcatcaa ccgctttgcc cgcattcgcg ctatgtgcgg
      481 ctgatcctcg gtgaatacgg aatcgctgcg cgactggtcg aagagcgctt ctgggaacga
      541 cgggaggaat ttctgctgct caatcctgcg gcagagttgc ctgtgctggt gaccgatggc
      601 gagccgccga taccaggggc ggctattgtg gcagagtata tcgaggaaac cggtctcgta
      661 ggaaatggcg cggatcggct gttgccatcg caacccggcc cgcgggttga ggtgcgccgc
      721 ctggccaact ggttcaacaa taaattccat gcggaggtca gcggcccgct ggttaacgaa
      781 agggcattca agcgccatat gaccgaggag cagggtggcg gtccgcccag caccgaagcg
      841 ctgcgcgccg cccgccagaa tatccgctat catctggcgt atatcggctg gctcgtgcgc
      901 acgcgtgatt ggctcgccgg agacaggctg agcctggccg atctcgccgc agctgcgcat
      961 ttatcggccg ccgattattt gggcgaagta ccgtggaacg aagacgaagc gacaaaaaac
     1021 tggtacgcgc ggataaagtc gcgtccgtca ttccgggcaa tcctggccga cacgcaggcc
     1081 gggctcccgc cctcgaaaac ctacgccgac ctcgacttct gaaagatcct gccgcgatca
     1141 aggccgcgct ggcggagaaa gcgcgcttgc acggattcga tgcgtttggc gttgccggac
     1201 ccgacgacat gcctgaattg aaatcgcggc ttgaaagttt cctggccgac ggcgcgcacg
     1261 gcgacatgac ctggctggca tcgactgcca atcgccgtgc ttcccctcag gtcatgtggc
     1321 cggaggcacg ctccatcatc atgcttggaa tgaactacgg acctgaggac gatccgctcg
     1381 ccatcctgaa aatgcgcacg cacggcgcga tctcggtcta tgccaaggga gatgactatc
     1441 acgatatcat caaggcccgc ctgaaagagt tggcgcgctg gttgatcgcc aacgcaggtg
     1501 gccaggtgaa aatatttgtc gataccgccg cgattatgga aaagcccctc gccgctcagg
     1561 gtggtcttgg atggcaaggc aaacacacga accttgtctc ccgccaatac gggtcatggc
     1621 tgtttctggg ctcgattttc accaccctcg acctgcctca tgattcgccc gaatccgaca
     1681 gctgcggcag ttgtcgcgcc tgcctcgaca tttgcccgac ggcggcgttt ccggcgccat
     1741 atcgcctcga tgcgcgacga tgcatttcgt atctcacgat tgaacataag ggcccgatcc
     1801 cgcgcgaact gcgcgccgcc atgggcaatc ggatctacgg ctgcgacgat tgtcttgccg
     1861 tctgtccctg gaacaagttc gcaagctatg gccgtgaagc caaactcgct gcgcgggaaa
     1921 cgttgcgcgc acccagtctt gccgacttgg ttcgcctcga cgatgcgcaa ttccgggcgc
     1981 tcttttccaa gacctcgatc aagcgcaccg ggcgcgaccg gtttgtcaga aatgtgctga
     2041 tcgccatcgg caactcagga gacggagccc tcgcgcttga agccgagcga ttgctcggcg
     2101 acgcatcgcc tctggtacgg ggcgctgcgg tgtgggcctt gtccaaactg ctgccgcggg
     2161 cagaattcga agggctggcc tcacgacgac aaaacgagtc ggatcccgat gtaagggagg
     2221 agtgggcggc tgcgctcgcc tagaattcct tcacggctcc tatcaaccgc tcaatgtctt
     2281 cggggcggga gagccggtga tcgccatcct tgatcagcgt cagaacaaca tcatcgcggg
     2341 aaaagcgcga aacaagttct atggcgtgcc tccacggcac atccggatct tcgacgccct
     2401 ggaggatgtg caccggacag cgcgtttcta tcagcccccc gagcagcaga tgcctgcggc
     2461 cgtcctcgat caacgcgcgc gtgatcggat agggctcctc gccatatgcc gatggtcgca
     2521 tccagactcc catctgctcg atctgctgtc tggcggcgtc cggaaactgc ttccacatca
     2581 gttcttcagt gaaatccacc gctggcgcga tcaaaaccat tccggcaatc ggcgccgcgc
     2641 cagggcgttc ag
//
LOCUS       DATDHO010000440         1829 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_463534, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000440 DATDHO010000000
VERSION     DATDHO010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1829)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1829)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1829
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463534"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VIY07_08475"
     CDS             <1..286
                     /locus_tag="VIY07_08475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEY6381825.1"
                     /translation="ATQAQVQAAEIALNGVREEARVGQRTTLDVLNAQQELVNARVAL
                     VSAQRDRVVASYTLLSAVGRLSPQVLGLRVPVYDANVHYQQVRVRTPDGR"
     gene            386..>1829
                     /locus_tag="VIY07_08480"
     CDS             386..>1829
                     /locus_tag="VIY07_08480"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IlvD/Edd family dehydratase"
                     /protein_id="HEY6381826.1"
                     /translation="MAKIAQKSSRRLRSQLWFDNPENPGMTALYLERYLNFGLTAAEL
                     RSGKPIIGIAQTGSDLSPCNRHHLELAKRVREGIRDGGGIAFEFPCHPIQETGKRPTA
                     AVDRNLAYLSLVEVLYGYPIDGVVLMTGCDKTTPACLMAAATVNTPAIVLSGGPMLNG
                     WWKGERAGSGTVVWKAREELAAGRIDDREFLEIAAASAPSVGHCNTMGTASTMNALAE
                     ALGMSLPGCAAIPAPYRERGQMAYDTGMRAVKIVEEDLKPSDILTRKAFENAIVANSA
                     IGGSTNAPIHINAIARHVGVKLSIEDWEKVGYNIPLLVNMQPAGKYLGEEYYRAGGLP
                     AVMHELLRAKRVHGDALTINGKTLGENVKDARSTDADVIKPYKAPMKKQAGFKVLKGN
                     LFDSAIMKTSVISDDFRKRFLSRPKDKNAFEGRAVVFEGPEDYHRRIDDPSLKIDENT
                     LLFMCGAGPIGYPGSAEVVNMQPPAALIKSG"
BASE COUNT          372 a          559 c          571 g          327 t
ORIGIN      
        1 ggcgacgcag gcgcaggtgc aggcggcgga gatcgcgctc aacggggtgc gcgaggaggc
       61 gcgggtcggc cagcgcacca cgctcgatgt gctcaacgcg cagcaggaat tggtgaacgc
      121 gcgggtggcg ctggtgagcg cgcagcgcga ccgcgtagtg gcctcctaca cgctgctctc
      181 cgcggtggga cgactgtcgc cgcaggtgct cggcctgcgg gtgccggtct acgacgccaa
      241 cgtgcactac cagcaggtgc gcgtgcgaac ccccgacgga cgctagcggc gaattcaacc
      301 caaacgcggc cccgtccaat tgtcttgctg tcggggcggc aatgcgatca tctatacgtc
      361 attgaagcgt acagccgggt aaaacatggc gaaaattgcc cagaaatcct cgcgtcgttt
      421 gcggtcgcag ctttggttcg acaaccccga aaatccgggg atgaccgcgc tctatcttga
      481 gcgctatctt aactttgggt tgacggcggc cgaattgcgg tcaggcaagc cgatcatcgg
      541 gatcgcccag acaggttcgg acctctcccc gtgcaatcgc caccacctcg aacttgccaa
      601 gcgcgtacgc gagggcattc gcgatggcgg cggcatcgcc ttcgaatttc catgccatcc
      661 catccaggaa accggaaagc gccccaccgc tgcggtcgac cgcaaccttg cttacctttc
      721 acttgtcgaa gtgctctacg gctatccgat cgatggcgtg gtgctcatga ccggctgcga
      781 caagaccaca cctgcctgcc tgatggcagc ggcgacggtg aacacaccgg caatcgtgct
      841 ttccggaggc ccgatgttga atggctggtg gaaaggcgaa cgcgcgggct cgggcacggt
      901 cgtctggaaa gcgcgcgagg agctcgccgc aggccgtatc gacgatcgcg agtttctgga
      961 aattgccgcg gcttccgccc cctcggttgg ccattgcaac accatgggca cggcctcgac
     1021 catgaacgct ctggctgagg cgcttggcat gtcgctgccc ggctgcgccg ccattcccgc
     1081 gccttacagg gagcgcggcc agatggctta tgacaccggg atgcgcgcgg tgaagatcgt
     1141 tgaagaggat ctgaagccct cggacatact tacgcgcaag gctttcgaga atgccatcgt
     1201 tgccaattcg gccatcggcg gctcgaccaa tgcgccgatc catatcaatg cgatcgcccg
     1261 gcacgtcggc gtcaaactct caatcgagga ctgggagaag gttggctata acattccttt
     1321 gttggtcaac atgcagcccg ccggaaaata tctcggcgag gagtattacc gagccggcgg
     1381 attgcctgcg gtcatgcacg aattgctgcg cgccaagcgt gtccatggcg acgcgctcac
     1441 catcaacggc aagaccttgg gcgagaacgt caaagacgcg aggagcacgg atgccgacgt
     1501 catcaagccc tacaaggccc ccatgaaaaa acaggcgggc ttcaaggtgc tcaagggaaa
     1561 cctgttcgat tcggcaatca tgaagaccag cgtgatttcg gacgatttcc gcaagcgctt
     1621 tctttccagg ccaaaggaca agaatgcatt cgagggccgc gcggtggtgt tcgaaggccc
     1681 ggaggattat caccggcgca tcgacgaccc gtcgctgaag atcgatgaaa ataccttgct
     1741 gttcatgtgc ggcgccggac cgatcggcta cccgggatca gccgaagttg tgaacatgca
     1801 gccgccggcg gctctcatca agagcggca
//
LOCUS       DATDHO010000441         3140 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_417066, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000441 DATDHO010000000
VERSION     DATDHO010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3140)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3140)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3140
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417066"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..128
                     /locus_tag="VIY07_08485"
     CDS             <1..128
                     /locus_tag="VIY07_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004116297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1428 family protein"
                     /protein_id="HEY6381827.1"
                     /translation="NVRDQGMKKVMGDPRMQPEANPMPFDGKRMIYGGFEMIVDA"
     gene            complement(681..1043)
                     /locus_tag="VIY07_08490"
     CDS             complement(681..1043)
                     /locus_tag="VIY07_08490"
                     /inference="COORDINATES: protein motif:HMM:NF015720.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPW repeat protein"
                     /protein_id="HEY6381828.1"
                     /translation="MPTAGIYLPKQWTDWTTWALGIWLCLSPWTLLFEFETPAMRNAV
                     LLGALIIFVEVIELSFFRGWEEWINVALGVWLIASNWVLGIEAPAARINFLVVGALVV
                     ALAAYEMWQIRQEPEKQA"
     gene            complement(1172..2938)
                     /locus_tag="VIY07_08495"
     CDS             complement(1172..2938)
                     /locus_tag="VIY07_08495"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY6381829.1"
                     /translation="MEEQSVERRLAAVVAADVVGYSRLMEVDEVGTLARLKTIRLEVI
                     DPALARCKGRIIKTTGDGILAEFQSVTEAVRCAVEFQQNMARRNRDMPASRCLLYRIG
                     INLGDVIVEENDIFGDGVNVAARLESMAEAGGICVSAAVRDQVGDKINVGYEDLGEQQ
                     LKNINRPIRVFKVLLDGQTSEASSQGSAGDSPLSVSARKPSIAVLPFVNMSGDPEQEF
                     FADGLTEDIITELSRFRELLVISRNAVFTHKGKPVKAREVAREFGVDYVVEGSVRKIG
                     DRVRVTIQLIDGETETHVWAERYDRKLEDIFAIQDEVTSAIAATLFGRVEAARHDRVQ
                     RKRTDNMAAYEYVLTGKVLHHWSTREANSESLRMLNRAIELDPKYAHAHAWKACVIGQ
                     AWVQNWCEDRDASMRAILDEVQIALSLDDNDADVHRILAALKLTFDEFDKAVYHQERA
                     LSLNPNSDIIVVQQGELLTWLGRPAEGIEWIHRAMRLNPYHPQRFWSHLGRAQYTARL
                     YADAIQSFSKLTAPDYAHHAFLAASAAQLGNRTAAGAHVQEVLQREPTFSTEAFLDTL
                     HYQQRSDKEHLRDGLVKAGLPN"
BASE COUNT          684 a          939 c          819 g          698 t
ORIGIN      
        1 gtaacgtgcg ggaccagggc atgaagaagg tcatgggcga tcctcgcatg caaccggaag
       61 ccaatccaat gccattcgat ggcaagcgaa tgatctacgg cggctttgaa atgattgtgg
      121 atgcataaca cggtgaacta cgtttgcccg gtttgacggc tcacccagcc cgaatgccct
      181 gaaagccggg ctttcacgtc tcggttctgc gggaagcagt cgaccagcag gcgccgcctt
      241 atacctcatt atacgcatgt ataggtgcaa atctggccct acccatcgct agcctgatgc
      301 catgtcggaa aaggtccgta cctccgccat ggccatcgcg acgattgttg tgtggttcat
      361 gatcgtaacg ttgggcttcg gcagccagtt ttggccgctc ctggcaggcg tgcactagcg
      421 cgtaaacgtt ggtaggtgtg cgatgatcaa aacggaaatc ggcactgtcg aacttcatcc
      481 aagcgtcgac agatctgcat ggcgtcgttt ctggcttagt cacgtgatga tcgagagagg
      541 caagtccctg cccgcaaatg ctcctttgaa gattcgagtg gcccagaaga ctctcacctg
      601 gcggctgaat gagcttcgac gtctcgagac agctgcgcgg gtgcactggt ccaaattggg
      661 cgactaattc tggatactgt ttacgcctgc ttttccggtt cctggcgtat ttgccacatc
      721 tcataggcgg ccagcgctac caccagcgcg ccgacgacca gaaaatttat ccgcgccgcc
      781 ggcgcctcga tacccagcac ccaatttgat gcaatgagcc agacgccaag cgcgacattt
      841 atccattcct cccagccgcg gaaaaatgac aattcaatta cttcgacaaa aatgatcagc
      901 gccccgagca gtacagcgtt ccgcatcgct ggcgtctcga attcgaacaa aagcgtccag
      961 ggggacaggc acagccagat gccaagagcc caggttgtcc aatcggtcca ttgcttggga
     1021 agatagatcc cggctgtcgg catttttgaa tcctgctcga aacgtcagaa gacacggtcc
     1081 acgcactgaa tcagcgcgcc ttcatcgact ttgcgcgaca ttttggttgt ttgtcgaccc
     1141 tcccttttct caattacgcg catctgacgc cctagttcgg tagcccggct ttcacaagcc
     1201 cgtcgcgcaa atgctcttta tccgaacgct gctgatagtg aagcgtgtcc agaaaggcct
     1261 ccgtgctaaa agtcggttcc cgctgtagca cctcctgaac atgcgcaccg gcagccgtgc
     1321 gatttcccaa ctgcgccgcc gatgcggcaa gaaaagcatg atgggcatag tccggtgcag
     1381 tcagcttgct gaacgattga atcgcgtcag catagagccg cgctgtgtat tgggcgcggc
     1441 caagatgact ccagaaacgc tgtggatgat acgggttcaa ccgcatcgct cggtgaatcc
     1501 actcgatccc ttccgcggga cgcccgagcc acgtcagtaa ctcaccctgc tggacgacaa
     1561 taatatcgct gtttgggttg aggctaagcg cacgctcctg atgataaacc gccttatcaa
     1621 actcatcgaa agtcagcttg agcgcggcga ggattcgatg cacgtcagca tcgttgtcat
     1681 cgagtgacag cgcaatttgc acctcatcca gaatcgctcg catgctggcg tcgcgatctt
     1741 cgcaccaatt ctgcacccac gcctgaccga tcacgcaagc tttccaggca tgcgcatgcg
     1801 cgtatttcgg atcaagctca atggcgcggt tcagcatccg aagcgactcg ctattggctt
     1861 cgcgagtcga ccagtgatgc aaaaccttgc cggtcagaac gtactcgtac gcggccatat
     1921 tgtcggttcg tttacgctgg acccgatcgt gccgggcagc ttcaacgcga ccaaacaacg
     1981 tcgcggcaat agccgacgta acctcgtctt gaattgcgaa aatgtcctca agcttccggt
     2041 cgtagcgttc agcccagaca tgcgtctctg tctcaccgtc gatgagctga atggtcactc
     2101 tgacgcggtc tccgattttg cgcacgcttc cttcgacgac atagtccact ccgaattcac
     2161 gcgcgacttc ccgcgccttt accggcttgc ccttgtgtgt gaaaacggca ttgcgggaaa
     2221 tgaccaggag ttcgcggaac cgggacaact ccgtaatgat gtcttcggtt aaaccgtcgg
     2281 caaagaactc ttgctccgga tcaccgctca tattgacaaa tggcagcaca gcgatcgacg
     2341 gtttccgggc actcaccgac agcggcgagt cgccggcgga accttgacta ctcgcttccg
     2401 aggtttgccc gtctaacagg actttgaaaa cccgaattgg ccgattgata ttcttgagtt
     2461 gctgctcacc aagatcctcg tacccgacgt tgatcttgtc accgacctga tcccgcaccg
     2521 ctgctgagac gcatatcccg ccggcctcag ccatcgattc aagccgcgct gctacattga
     2581 cgccgtcgcc aaaaatatcg ttctcttcga caatcacatc gccaagattg atgccaattc
     2641 ggtatagaag acagcgcgat gccggcatat cacgattacg ccgggccata ttttgttgaa
     2701 attccaccgc acagcggacc gcttcggtga cgctttggaa ttccgccagt attccatcgc
     2761 cggtggtctt gatgatgcga cccttgcatc tagctagtgc cgggtcgatc acctccagac
     2821 gtattgtttt gagccgcgcg agggtcccga cctcatcgac ctccatgaga cggctgtagc
     2881 ctacgacgtc cgccgctacg accgccgcga gtcggcgttc aacactttgc tcttccattg
     2941 ccggtccgac gcttgacttc gaagatctga taaagcggca tcatgcgcgc aaagccaata
     3001 gccccgtgca tgcaagcggc gttatatcac accaggcatc gccggcgaga aaggcggatt
     3061 cgatctccgc tctgacttgc gtcgcctaat gtccgctaat gacgcaaggc ggacaccgtg
     3121 aggctgttgt catcgtgatt
//
LOCUS       DATDHO010000442         5846 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_169345, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000442 DATDHO010000000
VERSION     DATDHO010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5846
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169345"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..124
                     /locus_tag="VIY07_08500"
     CDS             <1..124
                     /locus_tag="VIY07_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY6381830.1"
                     /translation="IGRRFEMACEKLGLNTERRSLTTEHFRKPKLGSDQLNLFS"
     gene            121..561
                     /locus_tag="VIY07_08505"
     CDS             121..561
                     /locus_tag="VIY07_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6381831.1"
                     /translation="MTMQSGKLTAVTLGVRDLQASARFYETIGFRRKFRATGDEIVFL
                     DGGGVVLALWDWDKLAQDAVLPGRTQPSFRGATFAWNCATPAEVDAIFARAIQAGAGV
                     LRKPEKTDYGGYRGYFSDPDGHAWEVVQAPGFAFTEDGRLILPE"
     gene            648..1358
                     /locus_tag="VIY07_08510"
     CDS             648..1358
                     /locus_tag="VIY07_08510"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEY6381832.1"
                     /translation="MADKPKPKSAPRLPLNEPVLRPTFRRERRALNKGIFPVAGCDEA
                     GRGPLAGPVVAAAVVLDPQRIPRGLNDSKKLDPEEREKLYEKICATAQVAVAFGAVER
                     IDRDNILRASLWALARAVKALPVRPRLVFVDGNQKIDCGCDCETVVSGDALVVSVAAA
                     SIVAKVTRDRFMTRLGLAHPGYGFERHMGYSVPEHFAALARLGPTVHHRKSFAPVAAK
                     LAALGGASDEAIAELLPL"
     gene            1482..2987
                     /locus_tag="VIY07_08515"
     CDS             1482..2987
                     /locus_tag="VIY07_08515"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY6381833.1"
                     /translation="MHYVSLLVEFLRGRPAVVFWTVALTQATLWTLIPAIFYSAPPAD
                     AAMLLAIGRELVLGSYLGPPLAFWLGEIAFGIAGSFGLYALAQACIVVTYWAVFALGR
                     GIVGTRHAILGVLLMVGIGAFTVPTPNFGPAILAAPLWALGLLYYWRAVGERRRGYWF
                     LLGVDLGLLLLTSYSGLILLALIVAFTLSFDRARHAAFHPEPGFAVLLLCVVVFPHAV
                     WLKNGASLVVEGINESVAAAGRLSPAIWLIFALVASHLGLALLVTLTSGWPRHPRERA
                     PEIERNPVDPFARNFVFFFALAPALLAIIVAFASGRLGPLDRIAPLVVLSGLAVIVAA
                     GDKVLLYRERLVSSAWLGLLIAPPVLVALSLAIFPWTLGIDLGIAQPANSEGRFYADI
                     YQRRTGKPLFYLSGDPRVAPLVALGAPSRPHVYFAWAPHRSPWASATDVQTKGGILVW
                     PAADNSGTPPQTLKVQFPEMVPEVPRSFPRAVQGMLPLIRLGWSVQRPATP"
     gene            complement(3009..4010)
                     /gene="cydB"
                     /locus_tag="VIY07_08520"
     CDS             complement(3009..4010)
                     /gene="cydB"
                     /locus_tag="VIY07_08520"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016682 - oxidoreductase activity, acting
                     on diphenols and related substances as donors, oxygen as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEY6381834.1"
                     /translation="MEWYLPLIWAVVIGTAVVMYVIMDGFDLGIGILFPSARSESERD
                     QMTRSIAPYWDGNETWLVLGGAGLFVAFPKAYAVIMPALYLPVIVMLIALVFRGVAFE
                     FRHVSYSKTGWNIGFFVGSTVATVAQGVILGGLIQGVTVRDGAFSGGPFDWATPFAFL
                     CGASLVAGYGLLGATWLTMKTEGPVAERARGQAKVLLVVVLVFMALVSLWTPLTQPRI
                     AERWFSLPNFYFLWPVPLVTALIAYYAWRWIEAGREVPPFLATIALFLLGFLGLVISN
                     FPYLVPPSLTVWDTAAAPASQIFMLLGTLLLLPIVLGYIGFVYWLFRGKVREGESYH"
     gene            complement(4024..5412)
                     /locus_tag="VIY07_08525"
     CDS             complement(4024..5412)
                     /locus_tag="VIY07_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0070069 - cytochrome complex [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019646 - aerobic electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEY6381835.1"
                     /translation="MDLDPVLLARLQFAFTIIFHIIFPSFTIGLSAYLATLGCLWLRS
                     GNDRFQHLMRFWTKIFAVSFAMGVVSGIVLLYQLGTNWSRFSVVTGNVIGPLLGYEVL
                     AAFFLEATFLGILLFGFNRVPPWLYVLSAAVVAVGTAISAFWILAANSWMQTPAGHEM
                     RGGIAYPADWLTIIFNPSFPYRLAHMLNAAYLTTGFVVLAVGARYLLAGRHIEEARTM
                     LRMAIGLTAILAPLQLLLGDLHGLNTLKHQPIKIAAMEAHWDGSKPGDFHIFAWPDEE
                     AGVNRFALSIPHGSSLVLTHRMNGLFPGLNSVPASDRPPVKVVFFAFRIMLAIGFFMI
                     AAALFGAYLWWRGTLFETRWYLRVMAHSWWIGFVAVISGWVVTESGRQPWIVQGILRT
                     ADATSPVPSASIAGTLALFVIAYGIVFWFGIYYINRLIAHGPQKVAAETGRFSPSPIS
                     AAQDPGREALQR"
     gene            5594..>5846
                     /locus_tag="VIY07_08530"
     CDS             5594..>5846
                     /locus_tag="VIY07_08530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEY6381836.1"
                     /translation="MVKQPKRASPTRGSVSPVGALLERYFGLSEQGTDVIAGVTTFLT
                     MVYIVFVNPIILGKTGMDQGAVFVATCVAVSTLVMALYAN"
BASE COUNT         1146 a         1740 c         1825 g         1135 t
ORIGIN      
        1 gatcggacgc cgtttcgaga tggcgtgcga aaagctcggc ctgaataccg aacgccgttc
       61 actgacgacg gagcatttcc gaaagcccaa gctcggatcg gaccagctca accttttttc
      121 atgacaatgc agtccgggaa actgacagcg gtgacgctcg gcgtgcgcga cttgcaggcc
      181 agtgcccgtt tttatgagac gattggcttc cgacggaagt ttcgcgcgac cggggacgaa
      241 atcgtatttc ttgacggggg cggcgtggtc ctggcgctat gggactggga caagctggcg
      301 caagatgcgg tgcttccggg gcggacccag ccgtcgttcc gcggcgctac cttcgcttgg
      361 aactgcgcca ccccggccga agttgacgca atctttgcga gggcgatcca ggccggcgcg
      421 ggcgttttgc gcaagccgga aaagacagat tacggcggct atcgcggata tttttccgat
      481 ccggacggac acgcctggga agtcgtgcag gcgcccggat ttgccttcac cgaggacgga
      541 cgtttgattt tgccggaata ggatccaggt tcgtcttgtc cccgttattt gctggcagag
      601 acacttccaa ttgacttgag gccagtcccg cgcgtttgat cgcggccatg gccgacaaac
      661 cgaaaccgaa aagcgcgccg cgtctgccgc tcaacgagcc ggttttgcgt cccacgtttc
      721 ggcgcgaacg gcgggcgctc aacaaaggga tctttccggt tgcagggtgt gacgaagcgg
      781 ggaggggccc gctcgctggt cccgtggtcg cggcagcggt ggttctcgat ccacagcgga
      841 ttccgcgcgg gctgaacgat tccaaaaaac tcgatcccga agagcgcgaa aagctatacg
      901 agaaaatctg cgcaacggcg caggtggcgg tcgcattcgg agcggtcgag cgcatcgacc
      961 gcgacaacat cctacgcgcg tcgctctggg cgcttgcccg cgccgtcaag gcgctaccgg
     1021 tccggccgag gctggtattc gtcgacggaa accaaaaaat cgactgcggc tgcgactgcg
     1081 aaacggtcgt gtcgggcgac gccctggtcg tttcggtagc ggcagcgtca atcgttgcca
     1141 aagtcacccg ggaccggttc atgacacggc tgggacttgc tcatcccggt tacggcttcg
     1201 aacggcatat gggctacagc gtgccggagc atttcgctgc gctggctcgc ttgggaccaa
     1261 ccgtgcatca tcgcaagtct tttgcgccag ttgccgccaa actggcggct ttgggcggcg
     1321 cttctgatga ggcgatcgcc gagttgttgc ctctttagag cagcttctct attgctgcga
     1381 cgctaagccc aagtgcttct ccttgatcgg ggatcggcat gggtttctga tagtgtacgc
     1441 aacgaataac gtttcctgcc gtttttaacc cacccgggcc aatgcattac gtctctctgc
     1501 ttgttgaatt cctgcgcggt cgcccggcgg tggtgttctg gaccgtggcg ctgacacaag
     1561 ccacgctttg gacgctgatc ccggcgatct tctatagcgc ccctcctgcg gacgccgcga
     1621 tgctcttggc gatcgggcgc gaacttgtgc tcggcagcta tctcgggccg ccgctggcgt
     1681 tttggctggg tgagatcgca ttcggaattg ccggcagctt cggcctgtac gcgctcgcgc
     1741 aggcgtgcat cgtcgtgact tattgggccg tgtttgccct tgggcgcggc atcgttggca
     1801 cacggcacgc aattctcggc gtgctgctga tggtaggcat cggcgccttc actgtgccga
     1861 ctccgaattt tggtcccgcc attcttgcgg caccattatg ggcgttggga ctgctgtact
     1921 actggcgggc tgtcggcgaa cgcaggcgcg gctattggtt cctgcttggt gtcgatctcg
     1981 ggttgcttct gctgacaagt tattccggac tgatcctgtt ggcgctgatc gtcgcgttca
     2041 cgctttcgtt cgatcgcgcc cgacatgctg cgttccatcc cgagcccggg tttgccgtgc
     2101 ttcttctgtg cgttgtcgtg tttccgcacg ccgtctggct taaaaacggg gcctcgctcg
     2161 tcgtcgaagg catcaacgag agcgttgcgg cggctggccg tctgtcaccg gctatctggc
     2221 tgatttttgc actggtcgcc tcgcacctgg gtctcgcatt gctcgtgact ttaacgagtg
     2281 gatggcctcg ccatccgcgc gaacgcgcac ccgagatcga acgcaacccg gttgatccat
     2341 ttgcgcgaaa cttcgttttc ttttttgcgc tcgcgcctgc gctgctggca atcatcgtcg
     2401 catttgcaag cggtcgactt ggcccgctgg accgcatcgc acctctcgtc gtgctttccg
     2461 gccttgccgt gattgttgcc gccggtgaca aggtgctgct ttatcgcgag cgcctggtgt
     2521 cgtcggcctg gcttggcctt ttgatagcac cgccggttct ggtggcgctt tcgcttgcga
     2581 tattcccctg gacgctgggc atagatctcg gaattgcaca gcccgcgaac agtgagggac
     2641 gattttatgc cgacatttac cagcgtcgca ccggcaagcc tctattttac ctgagcggcg
     2701 atccgcgcgt tgctccgctt gtcgcgctgg gtgctccaag ccggccccac gtctatttcg
     2761 cgtgggcgcc acatcgcagt ccgtgggcga gtgcgacgga tgttcagacg aaaggtggca
     2821 ttctggtgtg gcccgcggcc gacaatagcg gcacgcctcc gcagacgctg aaggtgcaat
     2881 tcccggaaat ggtgccggaa gtgccgcgct cttttccgcg cgctgtgcag gggatgttgc
     2941 cgctgatccg actggggtgg tcggtgcagc ggccggcaac gccttaaggg acggcgcgat
     3001 catccgcttc agtggtagct ttcgccctcg cgcaccttgc cgcgaaacag ccagtacacg
     3061 aaaccgatat agcccagcac gatgggcaag agcaggagcg tgccgagcag cataaagatc
     3121 tggctcgccg gcgccgccgc agtgtcccac acggtcagcg agggcgggac caggtatgga
     3181 aaattggaaa tcaccagccc gaggaaaccc agaagaaaca gcgcgatcgt cgccagaaat
     3241 ggcgggacct ctcgtccggc ctcgatccag cgccatgcat aataggcgat gagcgcggtc
     3301 accagcggta ccggccacaa gaaatagaaa tttggcaggc tgaaccagcg ctccgcgatg
     3361 cgcggctgcg tgagcggtgt ccataagctc accaaggcca tgaaaacgag gactaccaca
     3421 agcaggacct tcgcctgccc ccgagcgcgt tcggcgacag gcccttcggt tttcatcgtg
     3481 agccaggtgg cgcccaacaa gccgtagccg gcaacaagtg acgctccgca gaggaacgca
     3541 aacggcgttg cccaatcaaa cgggccgccg ctgaatgcgc catcgcgcac cgtcacgccc
     3601 tggatcaatc caccgaggat gaccccttgc gccactgtcg caaccgttga gccgacgaag
     3661 aaaccaatat tccatcccgt cttgctgtac gacacgtgac gaaattcgaa tgcaacgccg
     3721 cggaaaacga gagcaatcag catcacgatc accggcaggt acagtgccgg catgatgact
     3781 gcatacgctt tcggaaaggc cacgaacagc ccggcgccgc cgagcaccag ccaggtttcg
     3841 ttgccatccc aatagggtgc gatggatcgc gtcatctgat cgcgctcgct ttcgctgcgc
     3901 gcggacggga acagaatccc gatgccgaga tcgaagccat ccataatgac gtacatgacc
     3961 acggcggtcc cgatgacgac cgcccagatc agggggagat accattccat gacgccctcc
     4021 ctctcagcgc tgcagtgctt cgcgcccggg atcctgcgcg gcggagatcg ggctgggcga
     4081 gaaacgcccg gtctcggcgg cgactttctg cggaccgtgc gcaatcagcc ggttgatgta
     4141 gtaaatgcca aaccagaaca cgattccgta ggcgatcacg aacagcgcga gtgtgcccgc
     4201 gattgatgcg ctcggaaccg gcgaggtcgc atcggcggtg cgcagaattc cttgcacgat
     4261 ccatggctgg cggccgcttt cggtgaccac ccagccggag atgaccgcga cgaaaccaat
     4321 ccaccagctg tgtgccatca cgcgcagata ccaacgcgtc tcgaacaacg tgccgcgcca
     4381 ccacaagtaa gcgccgaaaa gcgcggcggc gatcatgaag aagccgatgg ccagcatgat
     4441 gcgaaaggcg aagaatacga ctttaaccgg cggccggtcg gatgccggca cgctgttcaa
     4501 accggggaac aagccgttca tgcgatgagt gagaacaagg gaagagccgt gcggaatcga
     4561 cagtgcgaaa cggttcacgc cagcctcttc gtccggccat gcaaagatgt ggaagtcgcc
     4621 cggcttgctg ccgtcccagt gtgcctccat cgccgcgatc ttgatcggct ggtgtttcag
     4681 cgtgttgagg ccgtgcagat cgccgagcag cagctgcagc ggcgcaagga tggcggtgag
     4741 gccgatcgcc atgcgcagca tggtgcgagc ttcctcgatg tgtcggcctg caaggagata
     4801 tcgcgcgcca accgccagca ccacaaaacc ggtggtcagg tacgccgcat tcaacatgtg
     4861 cgcaaggcga taagggaagc ttggattgaa gatgatggtc agccaatccg ccggataggc
     4921 gatgccgccg cgcatttcat ggcccgcggg agtctgcatc cagctgttcg ctgccaagat
     4981 ccagaaggcg gaaatggcgg tgccgaccgc aacgactgct gcagacagga cgtagagcca
     5041 gggcggcacc cggttgaagc cgaagaggag gatgcccaga aaggtcgcct ccaggaagaa
     5101 tgctgcaagt acctcatagc cgaggagagg tccgatcacg ttgccggtca cgaccgaaaa
     5161 gcggctccag ttcgtgccga gttgatacaa gagcacgatt ccggagacca ctcccatggc
     5221 gaaagaaacc gcgaatatct tggtccagaa gcgcatgaga tgctggaagc ggtcgttgcc
     5281 gctgcgcagc cagagacagc cgagcgtcgc aagataggcg gagagcccga tggtgaagct
     5341 cggaaatatg atgtgaaata taatggtgaa ggcgaactgt aaacgggcaa ggagtacggg
     5401 atccaaatcc atggcgagct ccaagcgaag gccccccgga cgactatagt ccgtgagcta
     5461 caaagcgtgg ggagcgaatt gtgttcctcc ggtgcgctaa agcgaagcgg cacatgccac
     5521 ggtatccaca gcgtccatat cgcactgact tgcggaacgc agacgcgtag gcttgcgaga
     5581 tcagggggtc gacatggtca aacagccaaa aagggcatca ccaacgcggg gaagcgtgtc
     5641 gccggtcggc gccttgctcg aacggtattt cggtctttcg gagcagggca ccgacgtcat
     5701 cgccggcgtg acgacgtttc tgaccatggt ctacatcgta ttcgtcaatc cgatcattct
     5761 cgggaagacc gggatggacc agggcgcggt attcgtcgca acttgcgtcg cagtcagcac
     5821 tctggtgatg gcgctttatg ccaatt
//
LOCUS       DATDHO010000443         4992 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_463592, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000443 DATDHO010000000
VERSION     DATDHO010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4992
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_463592"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1269)
                     /gene="parC"
                     /locus_tag="VIY07_08535"
     CDS             complement(<1..1269)
                     /gene="parC"
                     /locus_tag="VIY07_08535"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEY6381837.1"
                     /translation="MGKRLIPPEKGEVEEVALREALEERYLAYALSTIMNRALPDARD
                     GLKPVHRRILYGMRLLRLDPGAAFKKSAKVVGDVMGNFHPHGDQAIYDALVRLAQEFA
                     QRYPLVDGQGNFGNIDGDNAAAMRYTEARLTEVARLLIDGIDEDAVDFRATYDGTSEE
                     PVVLPAAFPNLLANGSQGIAVGMATAIPPHNAAELCDAALFLIDNPKARSKTLLKWVK
                     GPDFPTGAVIVDTPETIAEAYNTGRGSFRVRARWKQEETGRGTYVIVVSEIPYLVQKS
                     RLVEKLAELINEKKLPLVADVRDESAEDIRLVIEPRSRSVDAELMMESLFKLTELESR
                     IPLNMNVLVKGRIPQVLGLAEALREWLDHRREVLLRRSRYRLAQIEHRLEVLGGYLVA
                     YLNLDKVIKIIRKEDEPKTVLMRTFKLSDVQ"
     gene            1431..1727
                     /locus_tag="VIY07_08540"
     CDS             1431..1727
                     /locus_tag="VIY07_08540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381838.1"
                     /translation="MRRVVLATAATLAILAAGSFAPNRAEAVTVTTPAGLQAVVDANT
                     LLQDVACRWVRRCGPYGCGVRRVCWRGGPYYGGYGFYGRPYGYGYYRPYRRWGW"
     gene            complement(1729..2463)
                     /gene="recO"
                     /locus_tag="VIY07_08545"
     CDS             complement(1729..2463)
                     /gene="recO"
                     /locus_tag="VIY07_08545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEY6381839.1"
                     /translation="MQWTDEGIVLGVKRHGEANAILELMTREHGRHLGLVRGGFGSRL
                     KPVLQPGNTLNATWRARLDEHLGNYTVEGVALRAANFFSTPHAVYGINHLAALMRLLP
                     ERDSHAALYQALDDILDHLDDAIFAAPMVVRFELQLLSELGFGLDLDRCVATGSSGDL
                     VFVSPKSGRAVSRTAGEPWADKMLRLPAFLRERDAKPAGHDIADGFALTGYFLTRHVL
                     EARGLTLGDERAHFIAALSRALPSVA"
     gene            complement(2617..3537)
                     /gene="era"
                     /locus_tag="VIY07_08550"
     CDS             complement(2617..3537)
                     /gene="era"
                     /locus_tag="VIY07_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEY6381840.1"
                     /translation="MVDAHEQASDTKCGFIALIGAPNAGKSTLLNALVGSKVSIISHK
                     VQTTRALIRGITIEGRSQLIFVDTPGIFSPRRRLDRAMVTTAWGGAHEADLVGVMIDA
                     RKGIDEEAEQILSRLGDVKPSKLLILNKIDVVAKEALLALADAANKAATFEATFMVSA
                     LTGDGVADLKAWLSDHVPRGPWLYPPEQMSDAPMRQLAAEITREKLFERLHQELPYQS
                     TVETEVWKELRGGDIRIEQTIYVERESQRKIVLGKGGQTIKAIGETARKEIAEIVEAK
                     VHLFLFVKVREGWGEDPERYRAMGLEFPKE"
     gene            complement(3530..4246)
                     /gene="rnc"
                     /locus_tag="VIY07_08555"
                     /pseudo
     CDS             complement(3530..4246)
                     /gene="rnc"
                     /locus_tag="VIY07_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158247.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
     gene            complement(4237..>4992)
                     /gene="lepB"
                     /locus_tag="VIY07_08560"
     CDS             complement(4237..>4992)
                     /gene="lepB"
                     /locus_tag="VIY07_08560"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEY6381841.1"
                     /translation="MSVTSGTKRKEGGIAETVRVIIHALIIALVIRTFLFQPFNIPSG
                     SMKATLLVGDYLFVSKYTYGYSKYSLPLSPPVFSGRIPSDWMPQRGDVVVFRLPKEPS
                     TDYIKRVIGLPGDKIQVVDGVLNINGVPVKRERAPDFIETEEGTRDAPVKRWKETLAN
                     GVSYYSLDLVDNGFADNTQVYTVPPDHYFMMGDNRDNSTDSRFSQVGMVPFENIVGKA
                     QIIFFSVYEGERAWQFWRWPVSVRWSRLFTIVK"
BASE COUNT          935 a         1565 c         1488 g         1004 t
ORIGIN      
        1 ctgcacgtcg ctgagcttga aggtcctcat caggacggtc tttggctcgt cctccttgcg
       61 gatgattttg atcaccttgt cgagattgag ataggcgaca agatagccgc caagcacttc
      121 cagccgatgc tcgatctgcg ccaggcgata tcttgagcgg cgcagcaaca cctcgcgccg
      181 atgatcgagc cattcgcgca aggcttcggc aaggccgagg acctgcggga tgcggccctt
      241 caccagcaca ttcatattga gcggaatgcg gctctcgagc tcggtgagct tgaaaagcga
      301 ttccatcatt agctcggcgt cgaccgaacg cgagcgcggc tcgatcacca ggcgaatgtc
      361 ctcggccgat tcatcgcgca cgtcagcgac cagcggcagc tttttctcgt tgatcagctc
      421 ggcgagcttc tcaaccagac gcgatttctg cacgagatac ggaatctcgc tgacaacaat
      481 cacataagtg ccgcgcccgg tttcttcctg tttccagcgc gcgcgcacgc gaaacgagcc
      541 gcggccggta ttgtaagctt cggcgattgt ttccggcgta tcgacaatga cagcgccggt
      601 cgggaagtcc ggtcccttga cccacttgag cagcgtcttg ctgcgcgcct tcggattgtc
      661 gatgagaaac agcgcagcgt cgcacagttc ggcggcattg tgcggaggaa tggcggtcgc
      721 catgccgacc gcaatacctt gcgagccatt agcaagcaga ttggggaatg ctgccggcag
      781 gacgacgggc tcttcgctgg tcccgtcgta ggtcgcgcgg aagtcgacgg catcttcatc
      841 gataccatcg atcaagaggc gcgcaacttc cgtaagccgc gcctcggtgt aacgcatggc
      901 ggcggcgtta tcgccgtcga tgtttccgaa atttccctgc ccgtcgacca gcggatagcg
      961 ctgcgcgaac tcctgcgcca gtcgcaccag cgcatcatag atcgcctgat cgccgtgcgg
     1021 gtggaagttg cccatcacgt cgccgacgac cttggccgac ttcttgaaag cggctccagg
     1081 atcgaggcgc aacaaccgca tgccgtacaa aatgcggcgg tgcaccggct tcaggccatc
     1141 gcgcgcatcg ggaagcgcgc ggttcatgat cgtggacagc gcgtaagcga gatagcgctc
     1201 ttccagcgcc tcccgcagcg caacctcttc aacctcgcct ttttcagggg gaatcagtct
     1261 ttttcccatg gtcgatagct aaaccgttgt ttcgggatga acaagcgatg aacgggccgg
     1321 ccatctattc ttccaagttt tttctgtaca attagtgaac ctggagacgt ggggcagcgt
     1381 tatctgcgct gccaacgttt gttccaagct ttactaggat ggaggacgca atgcgtcggg
     1441 ttgtacttgc aactgccgcc acgctcgcca ttctcgcggc gggctctttc gctccaaatc
     1501 gcgccgaggc cgtgacggtt accacaccgg ccgggcttca ggctgtcgtt gatgccaata
     1561 ccctgctcca ggacgtcgcc tgtcgctggg tacggcgctg cgggccatat ggttgtggcg
     1621 tgcgccgcgt atgctggcgt ggtggcccat actacggtgg ctacggcttc tacggccgcc
     1681 cctacgggta tggctattat cgcccgtatc ggcgttgggg gtggtaagct aggcgacgct
     1741 cggcagggcg cggcttagcg cagcgatgaa atgggcgcgc tcgtcgccga gcgtgaggcc
     1801 gcgtgcttcc agcacgtggc gagtcaggaa ataaccggtc agcgcgaacc cgtcggctat
     1861 gtcatggccg gcgggtttag catcacgctc gcgcaggaac gcaggcagcc gcagcatttt
     1921 gtcggcccag ggctcgccgg cggtgcgtga taccgctcgg cccgactttg gcgagacaaa
     1981 caccaggtcg ccggacgaac cagttgcgac gcagcgatcg aggtcgagac caaaccccag
     2041 ctcggacagg agctgcagtt cgaaccgcac aaccatcggc gcagcgaata ttgcatcgtc
     2101 aagatggtcg aggatgtcat cgagcgcctg gtaaagggca gcgtgcgaat ctcgctcggg
     2161 caatagccgc atcagcgcgg cgagatgatt gatcccatag actgcgtgag gcgtggaaaa
     2221 aaaattcgca gcccgcagcg caaccccttc caccgtgtag ttgccgagat gctcgtcgag
     2281 ccgcgcccgc caggtggcat tcagcgtatt ccccggctgc agcaccggct tcagccgcga
     2341 cccaaagccg ccacgcacaa ggccaaggtg acggccgtgc tcgcgcgtca tcaactcgag
     2401 gatcgcattc gcctcgccat ggcgcttgac gccgagcacg atcccttcat cggtccattg
     2461 catgacagct cactggaatc actatcttct ctacattagt ggcgcggggc ggcgtcacaa
     2521 gtgcggccca tacctttccg atatgtcaag gccgggcatg acgggtgact gtgcgatcgt
     2581 catccgggga ccgccccgcc tggatcggga ggacagtcac tccttgggaa actccagtcc
     2641 catcgcgcga tagcgctcgg gatcctcgcc ccagccttcg cgcaccttca cgaacaggaa
     2701 caggtgcacc ttggcttcga cgatttccgc aatctcctta cgcgcggttt caccgatcgc
     2761 cttgatcgtc tgcccgcctt tgccgagcac gatcttgcgc tggctttcgc gctccacgta
     2821 aatcgtctgc tcgatgcgga tatcgccccc gcgcaactcc ttccacacct cggtttccac
     2881 cgtcgactgg taaggcagct cctggtgcag ccgctcgaac agtttctccc gtgtgatctc
     2941 ggcagccaat tggcgcatcg gtgcatccga catctgctcg ggcggataga gccacggtcc
     3001 tcgcgggacg tgatccgaaa gccacgcctt gagatcggcg acgccatcgc cggtcagcgc
     3061 ggacaccatg aaggtcgctt cgaatgttgc agctttgttg gcggcatcgg ccagcgccag
     3121 cagcgcctcc ttggccacca catcgatctt gttgaggatg agcagcttgg acggcttcac
     3181 gtcaccgagg cgcgacaaaa tctgttccgc ttcctcgtct atccccttgc gcgcatcaat
     3241 catgacgccg acgagatcgg cctcgtgcgc cccgccccac gccgtcgtca ccatcgcccg
     3301 gtcgagacgc cgacgcggag agaaaattcc gggagtgtcg acgaagatga gctgcgaacg
     3361 gccttcgatc gtaatgccgc ggatcaacgc acgcgtggtc tgcaccttgt gcgatatgat
     3421 gctgactttc gatcccacca gagcattgag caacgtcgat ttgccggcat tgggcgcgcc
     3481 gatcagcgcg atgaagccgc actttgtgtc gctcgcctgc tcgtgagcat caaccatcaa
     3541 ctttgtccgc cggcgcgccg acccgcgtga gcatggccgc ggcggcagcc tgctcagcag
     3601 cacgttttga gctgccgagc ccttccgcgg gcgggcggtc cggcaggacc accgcgacgc
     3661 ggaattcggg atcatggtgc ggccctgtcc gcgccagttc gcgataagcc ggtgtcggca
     3721 gtccacgcgc ctgcgcccat tcctgcagca ttgtttttgg atcgcgcagc gggcgaagcg
     3781 gcttgagcat tcgctctttc cagaagcgct cgatgaggcc gtcggccgcc tcatagccgc
     3841 catcgagaaa caccgcgcct accagcgcct cgcaaacatc ggcaagaatt gtgatacggc
     3901 gccggccgcc cgcatgtgat tccgagttgc ccagcttcag cgccggcccg aggtccattg
     3961 cgcgcgcgac ttcggcacag gtctccttgc gtaccagatc ggccaggcgc cgcgatagct
     4021 ctccttcatt ggcccgcggg aaggcccgat agagcatgtc ggagatgacg aggccaagca
     4081 cgtgatcgcc gaggaattca agccgctggt agctcgccgc gcgattgcct cctgacagcg
     4141 cggaaatgtg agtgagggct cgttcgagca agtctttatc ggcaaacttg tagccgatcc
     4201 tgctttcgag cgccgtcctg tccctggcct tgcggctcat ttgacgatcg tgaacaacct
     4261 gctccagcgc actgatacgg gccagcgcca aaattgccag gcgcgctcgc cttcatacac
     4321 cgagaaaaag atgatctgtg ctttgcctac gatgttctcg aacggcacca tgcctacctg
     4381 gctgaaccgg ctgtcggtcg aattgtcgcg gttgtcaccc atcatgaaat agtggtcggg
     4441 cggcaccgtg tagacttgcg tgttatcggc gaatccgttg tcgaccagat cgagcgagta
     4501 atagctcacg ccgttcgcca atgtctcctt ccagcgcttg accggtgcat cgcgcgttcc
     4561 ttcttcggtt tcgatgaaat cgggagcgcg ctcgcgcttg acggggacgc cgttgatatt
     4621 cagcacgccg tcgacaacct gaattttgtc gccgggcaag ccaatcacgc gcttgatgta
     4681 gtccgttgag ggttccttgg ggagccggaa tacgacgaca tcgccccgtt ggggcatcca
     4741 atcgctcggg atgcgcccgg agaacaccgg cggcgacaac ggcagcgagt atttactgta
     4801 gccataggtg tacttcgaga cgaacaggta gtcgccgacg agtaatgtcg ccttcatcga
     4861 gccggatgga atattgaacg gctggaacag gaaggtcctg atcacaaggg cgatgatgag
     4921 cgcatgaatg atcacgcgca cggtttcagc gataccgccc tcttttcgct ttgttccgga
     4981 tgtcacactc at
//
LOCUS       DATDHO010000444         3354 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_67370, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000444 DATDHO010000000
VERSION     DATDHO010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3354)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3354)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3354
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67370"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(191..1246)
                     /locus_tag="VIY07_08565"
     CDS             complement(191..1246)
                     /locus_tag="VIY07_08565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009762522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6381842.1"
                     /translation="METEKIDHHRRHFFGAAAMTIAAAQLGIAGSADAQSGNKRTTQL
                     PAIKPGTNTSFAPLKQIDAGVLNVAYAEAGPADGPPVILLHGWPYDIYSFVDVTPLLA
                     AAGYRVLVPYLRGYGATRFLSNDTFRNGQPSAVAADTIAFMDALKIQSGVLAGFDWGA
                     RTVNIVSALWPERCKATVSVSGYLIGSQEAGKMPLPPKAELEWWYQLYFATERGRLGY
                     EKYRRDFSKLIWQLASPKWQFDDATFDRSAAAFDNPDHVRIVIHNYRWRLALADGEPK
                     YADLDKRLADLPAISVPTITLEGDVNGAPHPDPSAYAKKFSGPYEHRTITGGIGHNLP
                     QEAPQAFAEAVINATKI"
     gene            complement(1518..3206)
                     /locus_tag="VIY07_08570"
     CDS             complement(1518..3206)
                     /locus_tag="VIY07_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6381843.1"
                     /translation="MTPPKQSIIEARREQAFPILEHPEIERMRRFGTRRSYKPGEILA
                     QAGKVNEGFTVILSGKVEVTRHASSGQGRLIVTHGVGSFLGELAQLAGRPALVDAHAQ
                     GAVDALVIPPDRLRALLIAEAELGERIMRALILRRIGLLEEGTGGPVIVGRSQSGEVL
                     RLANFLRRNGHPHQELDPETDHEARALIERFHIDPGQLPIVLCPSGQLLRNPGEIELA
                     RCIGLVGPIDPNRIFDVAIVGAGPAGLAAAVYAGSEGLSVLMLDCRAFGGQAGASARI
                     ENYLGFPTGISGLALMGRAYNQAQKFGVEMAIPDEVVGLDSQPDSKHGVFALKLSNSE
                     RALARSVVIASGARYRRLAVDRLEQFEGASVHYWASPLEAKLCAGQEVALVGAGNSAG
                     QAAVYLASQVSKVWLLVRGRSLASRMSKYLVDRIAGLPNVEVLTRATATALEGRDGIL
                     EAIRWRQGASGQEVRRSIRHLFLFIGAEPNTDWLSGSGVTLDKRGFVLTGSELDGNQR
                     PWETSRRGVFAIGDVRAGSVKRVAAAVGEGAQVVTLIHGTLATNDTPLSIEQTG"
BASE COUNT          706 a         1022 c          950 g          676 t
ORIGIN      
        1 cgagcaacga cggctgcact gtaagaccgg cattgtcgca gtcctaattc gatgcccagc
       61 tcacgctggc ttcttcaatg cggcaggatc gaccggcatc ttgcgcaggc gtttgccggt
      121 tgcgcaaagc ttgcgttggc gatcgcgggc acgatcgccg acgttccggt ttcgccaatc
      181 ccgcttccat tcaaatcttg gtggcgttga tgacggcttc agcaaaggcc tgtggcgctt
      241 cctgaggcag gttgtgcccg ataccgcccg tgatggtccg atgttcgtat gggcccgaga
      301 atttcttcgc gtaggcgctc ggatccgggt gcggggcgcc attcacatcg ccttcgagcg
      361 taatagtggg cacggaaatg gccggtaaat cggcaagccg cttgtccaag tcggcatatt
      421 tcggctcgcc gtcagccaga gcgaggcgcc agcgatagtt atggatcacg atcctgacgt
      481 gatccgggtt gtcgaaggcc gccgcgctgc gatcgaaagt ggcatcgtcg aactgccact
      541 tcggcgaggc gagttgccag atgagttttg aaaaatcgcg ccggtatttt tcgtagccca
      601 ggcgcccgcg ctctgtggcg aaatagagct gataccacca ctcgagctct gctttgggcg
      661 gtagcggcat cttgccggct tcctggctcc cgatgaggta accgctcacg gacacagtgg
      721 ctttgcaccg ttccggccaa agcgcggaga cgatgttgac ggttcgcgcg ccccaatcga
      781 agccggcgag aactccgctc tggatcttga gggcgtccat gaaagcgatt gtgtctgccg
      841 ccaccgccga cggctggccg ttccggaacg tgtcgttcga aagaaagcgc gtcgcgccgt
      901 aaccgcgcag atagggcacg agcacgcggt agcccgccgc cgccagcaaa ggcgtgacat
      961 cgacaaagct gtagatgtcg tagggccaac cgtgcagaag gatgactggc gggccatctg
     1021 ccgggcccgc ttcggcatat gccacattca ggacgccggc atcgatctgc ttcagcgggg
     1081 caaacgaggt attcgttcct ggctttatcg caggcaattg cgtcgttctt ttattccctg
     1141 actgcgcgtc agccgagccg gcaatgccaa gctgagcagc ggcgatagtc atcgctgcag
     1201 cgccaaaaaa atgacggcga tgatgatcga tcttttccgt ttccatagcg agatccccgc
     1261 ggcttcaatc gttgaaggct gttctagttt tcaaaatgct tccgcgtcga cgcacgtgcc
     1321 atcgacgcgg gttgtgaaaa cgccttcgtt tgccgatccc atacgattgt ttgctattgc
     1381 gctggatcgg caacatgaag cttaagaaat ttggagcgca acaaaatcac gttggctgtg
     1441 gattctgcga actccccgaa caaacttcga gttggaccaa agtccaatgg gctttttttg
     1501 aaagccgcgc ttcgacttca acctgtttgc tcgatcgaaa gcggcgtatc gttggtcgcc
     1561 agcgtgccgt gaatcagtgt cacgacctgc gctccctcgc cgacagcggc agcaacacgc
     1621 tttaccgaac ctgcccgcac atcgccgatc gcaaagacac cgcgccggct cgtttcccaa
     1681 ggacgttggt tgccatcaag ttccgagccc gtcagcacaa agcccctctt atcgagggtg
     1741 acgcctgatc cggacagcca atccgtattc ggttccgcac cgataaaaag gaataaatgt
     1801 cgaattgatc gacggacttc ttggcccgaa gcgccctgcc gccagcgaat tgcttccagt
     1861 atgccgtccc gaccttcgag agcagtagcg gttgcccgcg tcagtacttc cacgttcgga
     1921 agacctgcaa tccgatcgac aaggtacttc gacatccgcg acgccaggct gcgcccgcgc
     1981 accaggagcc acaccttgga aacttggctc gcgaggtaga cggccgcctg ccccgccgaa
     2041 tttccggcgc ctaccagggc aacttcctgt ccggcgcata gcttcgcttc gagcggagaa
     2101 gcccaatagt gaacgcttgc tccctcgaat tgctcaagcc tgtcaaccgc gagccgacgg
     2161 taacgtgcgc cgcttgcaat cacgacagaa cgggcaagcg cacgttcact gttcgacaac
     2221 ttcaaagcaa acacaccgtg cttggagtcg ggctggctat ccaatccgac cacctcatcg
     2281 gggatcgcca tttcgacacc gaatttctgc gcctggttgt aggcacgccc catcagagca
     2341 aggcctgaaa tgccagtcgg gaaacctaga taattttcta tgcgggcgga cgcgccagcc
     2401 tgtccgccga atgcgcgaca atcgagcatc aacacggaca gtccttccga ccccgcatag
     2461 acggcagcag caagcccggc cgggccagca cccacgatcg caacatcaaa gatacgattc
     2521 gggtcgattg gcccaacgag tccgatgcaa cgagcaagct caatttcacc ggggttacgc
     2581 agcaactgtc ccgaaggaca caaaacgatc ggcaattggc caggatcaat gtgaaaccgt
     2641 tcgatgaggg cccttgcttc gtgatcagtc tctggatcga gctcttgatg cggatggccg
     2701 ttgcggcgga gaaagttagc caaccgaagg acttcgccac tttgcgatcg cccgacgatc
     2761 acgggcccgc cagtgccttc ctcaagcaaa ccgatgcggc ggaggatgag cgcgcgcatg
     2821 atgcgctcgc caagttcggc ttcagcgatc aacaacgccc gtagccgatc tggaggtata
     2881 accagggcat cgactgcacc ttgcgcatga gcatcaacga gcgcagggcg accggccagt
     2941 tgcgccagct cgcccaggaa cgaccctacc ccgtgcgtga caatgagccg gccctggccg
     3001 gacgaagcat gtcgggtcac ctccaccttg ccagacaata tgacggtgaa accctcgttg
     3061 accttgcccg cttgagccag aatttctcca ggcttgtacg accgacgcgt gccgaagcgg
     3121 cgcatccgct cgatctccgg atgctcaagg atcggaaacg cctgctctcg ccgcgcttcg
     3181 atgatcgatt gttttggtgg cgtcatgttt gatccacttc ggtatcgttg cgtgaattcc
     3241 gccgacatga actaaaaagc cataagctgg catcgcgccg ttcagtcgat cacatcgcgt
     3301 gtacgatgtt cgaattcaaa cctgcgcagg gtatcgacag caatgatgac ttgt
//
LOCUS       DATDHO010000445         3356 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_169606, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000445 DATDHO010000000
VERSION     DATDHO010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3356
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169606"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="VIY07_08575"
     CDS             complement(<1..249)
                     /locus_tag="VIY07_08575"
                     /inference="COORDINATES: protein motif:HMM:NF013412.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEY6381844.1"
                     /translation="MEWKEALPLLQDNHTGVAISVTPKGRAQSTVVSTALLDGKLGFA
                     SRPRTVKLKNIQRTGRAAVTVIKLDARRYVTVEGPASIE"
     gene            665..>3356
                     /locus_tag="VIY07_08580"
     CDS             665..>3356
                     /locus_tag="VIY07_08580"
                     /inference="COORDINATES: protein motif:HMM:NF024117.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HEY6381845.1"
                     /translation="MMPTSNSTITAVQSGSAAVRLREARRFLEQFEPGAEVLLLGTSR
                     GSVDDLARAISLEKGATFGLHRFSFTQLAARLAVMELAARDCAPTTTLGHEAVATRAA
                     FEARSNESLQYFSPVSQTPGFPKALARTLLDLRLAAVAGSDLLRLPRSGTDLAALLDG
                     IDILLNEAGASDRAALFETATRALGSAVTGWPSMPLLLLDVPFESEIEAQFLWALVQQ
                     SLLAMITVPAGDAFAMSQLEKRGVRLQVIEETEQNDLTQLARYLFSKEPPPERTRTGE
                     LVWFSAPGEGRECVEIARRILKEAGRGVRFDEMAIVIRSTQQYAGLLEHALSRAGIPA
                     YFERGTRRPDPTGRAFLAILSCATEKFSAKRFAEYLSLAQVPSLEDSGKAPTGNATWV
                     ASRDDVFGVLSERAPDESDDNGSDDQVSAANVTGDQAVVAGTLRAPWKWESLLVESAV
                     IGGSDRWARRLDGLAAEYDLKIRELSSDQPDSPRIPHLERERQNLAHLRSFALPLIEA
                     MSAWPNEATWGDWLQRLEAFAPCVLRRPEFVLRVLADLRPMAAVGPVSLAEVRDVLAD
                     RLAALEVEPPAHRYGRVFVCSPDQVRGRAFRVAFVPGLAERLFPQKLREDPLLLDDLR
                     RDLGSELTLQDDRAEHERLLLRLAAGAAKEKLYVSFPRIETAEARARVPSFYGLEVMR
                     AVTGRVPDHQQLELEASEEANASLAWPAPPRPDDAIDDFEHDLSVLRLLMRSDQEVKG
                     HAHYLLRLNDYVRRSASERWARARPAWSPYDGLVRVTDATRPFLQSQRLGVRPYSVSA
                     LQNYAYCPYRFLLSALYHLEPLEEPEPLEHMDPLTKGSLFHEVLAEFFRALQQRQMTM
                     ATAAMDRVLEILDATLTRVAANYAELLAPAVDRVWQDEIAN"
BASE COUNT          620 a         1012 c         1013 g          711 t
ORIGIN      
        1 ctcgatggac gccgggcctt cgacggtaac gtagcgccgg gcgtcgagct tgatgacggt
       61 aacggccgct cggcctgtcc gctgtatgtt tttgagtttt acggtccgcg gccgcgacgc
      121 gaagccgagc tttccatcca gcagagccgt cgagacaacg gtggactgcg cgcgaccctt
      181 cggcgtgacg ctgatcgcga caccggtatg attgtcttgc aacaggggga gtgcttcttt
      241 ccattccatt tagtcattcc tccgaacgtt ggagtattgt cggctcaacc gcgatgaacg
      301 aatgctccag aacataaaca ccttccttag ggttggtttg cattagactg aagccgaagc
      361 cgttttacct ggacacttga aaaaatgcaa agatttttcc gtgccggcgg taagactgcg
      421 tgccttatac agtccctatg agtgaccaaa cagcgtgaat gtgttaagtt attttgcttt
      481 ccgtcggagg cgcgaggtcc agggtgactg aatcgggctc tgttggagaa tcgttccagt
      541 ggttccaaac gttccaatcg ttccaggcgt tttgaatggg ttgagcaact cgaacgtttt
      601 gaaccgaacc atcggtcgct taccctcaac ataacctttg tagtgcgtcc tcctcgagac
      661 atgaatgatg ccgactagca attctactat cacggctgtt cagtctgggt cggcggcagt
      721 tcgcctgcgc gaggcgcggc gatttctgga gcagttcgag cccggcgcgg aggtgcttct
      781 cctcggaaca tcacgcggct ccgtggacga tctcgcgcgt gcgatttcgc tcgaaaaagg
      841 tgcgacgttc ggactacatc gattttcttt tacgcaactc gcggcccggc ttgccgtcat
      901 ggaactggct gctcgcgact gcgctccgac gacgacgctg ggacacgaag cggttgcgac
      961 gcgcgcggcg ttcgaagcgc gcagcaatga atcgctacaa tatttctctc cggtgtccca
     1021 gacgccgggc tttccgaaag cgctggcgcg taccttgttg gacttgagac ttgctgctgt
     1081 agctgggagt gatttgctcc gactgccgcg cagcgggact gatcttgccg ccttgctgga
     1141 tgggattgac atccttttga acgaggctgg cgccagcgat cgggccgcct tgtttgagac
     1201 tgcaaccagg gcgttgggct cggctgtgac cggctggccg tcgatgccgc tgctgctgct
     1261 cgatgttcct ttcgaatccg aaatcgaagc gcagtttctc tgggcgctgg tccagcagtc
     1321 gcttctggcg atgattaccg tgccggcagg cgacgctttt gcgatgagcc agctcgagaa
     1381 gcgcggtgtg cggctccagg tcatcgagga aactgagcag aacgatctaa cccagttggc
     1441 gcgttacctg ttttcaaaag agcctccgcc cgagagaaca cgcacaggtg agctggtgtg
     1501 gttttcggcg cccggcgaag gccgcgaatg tgtcgaaatc gcgcgccgca tcctgaaaga
     1561 agccgggcgc ggcgtccgct tcgatgagat ggcgatcgtc atccgctcga cccagcagta
     1621 cgccggcctg cttgagcatg ccctttctcg ggccggaatt ccggcatact tcgagcgcgg
     1681 tacccgccgt cccgatccca caggccgagc ctttctcgcg atcctgagtt gcgcaaccga
     1741 gaaattttcg gccaaacgct ttgccgaata tctttcgctc gcacaggtac cgtccctgga
     1801 ggattccggc aaggctccga ccggtaatgc gacgtgggtg gcctcacgcg acgacgtctt
     1861 cggcgtcctc tcggagcgcg cgcctgacga atctgacgat aacggcagcg acgaccaggt
     1921 atccgctgcc aacgtcactg gcgaccaggc cgtggtagcc gggacactca gagcgccctg
     1981 gaaatgggag agtttactgg ttgaatccgc cgtcatcggt ggtagtgatc gctgggcgcg
     2041 ccgattagac ggactggcgg cggagtatga tctaaaaatc cgcgagctaa gctccgatca
     2101 acccgactca ccgcgaattc cccacctgga gcgcgagcgg cagaatcttg cgcatcttcg
     2161 aagtttcgcc ttgccgctca tcgaagcgat gtcggcctgg ccaaacgagg cgacttgggg
     2221 tgattggctt cagcgcctcg aagcatttgc gccatgcgtg ctccggcgcc ccgagtttgt
     2281 gctccgcgtg cttgccgatc tccgtcccat ggccgcggtg ggacctgtga gcctggccga
     2341 agtgcgcgac gtgcttgccg atcggctggc agccttggaa gtggagccgc cagcgcatcg
     2401 gtacggccgg gtattcgttt gcagccccga tcaagtccga ggccgcgcct ttcgcgtcgc
     2461 ctttgtgcca ggcctggccg agcgactctt cccgcaaaag ctgcgtgagg atcctctttt
     2521 gttggacgac ctccggcgtg acctaggcag cgagttaacc ctgcaagatg atcgggccga
     2581 gcatgaacgg ctgctactgc ggctcgcggc tggcgcagcg aaagaaaagc tatatgtctc
     2641 cttcccgcgc atcgagacag cagaggcccg tgcccgcgta ccgtcgttct acgggctcga
     2701 agtcatgcgt gctgtgaccg gccgcgtccc cgaccatcaa cagctcgagc tcgaagcttc
     2761 ggaagaagcc aatgcgagcc tcgcatggcc ggcgcctccg cgccccgatg acgccatcga
     2821 cgacttcgag cacgacctgt cggtgctgcg cctcttgatg cgcagtgatc aagaggtgaa
     2881 aggccacgcg cattacctgc tccgactgaa cgattacgtc aggcgctcgg ccagcgaacg
     2941 ctgggcgcgg gcgaggccag catggtcacc ctacgacggg cttgtccggg tcacggacgc
     3001 cacgcggccc tttctccagt cgcagcggct tggcgtccga ccatactccg tctcggcgtt
     3061 gcagaattac gcttactgcc cctatcgatt tctcctttcg gcactctatc atctcgaacc
     3121 gctcgaagaa cccgagccgc tcgagcacat ggaccccctc acgaagggga gcctgtttca
     3181 tgaggttttg gccgaattct ttcgcgcttt gcagcaacga caaatgacga tggcaacggc
     3241 agccatggat cgggtgctcg agatcctcga tgccacgttg acgagagtcg cggcaaacta
     3301 cgccgagcta ctcgctcccg cagtagaccg cgtatggcag gacgaaattg ccaata
//
LOCUS       DATDHO010000446         5099 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_21024, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000446 DATDHO010000000
VERSION     DATDHO010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5099
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21024"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1219
                     /locus_tag="VIY07_08585"
     CDS             <1..1219
                     /locus_tag="VIY07_08585"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY6381846.1"
                     /translation="RSPEQKLAAEVILSACRRAREDFLQRHAGTIYRKLTKNLADFVR
                     VDDLVYGAARLVPGLTPTHKQVDAESSLMQAEKEGVEVDQGIFLSQVLAVPDAGMHLC
                     KSMLLPKPEALERMAEFVKGGTIDFGPAKVERQGKAAVVTVCNPRFLNAEDDNTLDDT
                     ETAADIAMLDPMSEICVLRGSVVDHPRYRGRKIFSAGINLTHLYRGKIPYLWYIRRDM
                     GIVNKMFRGLALVGSNPDEIYGGTREKPWVAGVDVFAIGGGCQYLLAMDYVVAGSDAY
                     MTLPARKEGIIPGAANLRLTRFVGARAARQAIMMGRRFECDSPEGRMICDLIVPPDEL
                     DAAIARVIDDFTGSGVVSAAGNRRAFRVGEEPLDTFRRYMAVYCREQAYCHFSPALIA
                     NLEKYWNAAQRKI"
     gene            1245..2573
                     /gene="paaK"
                     /locus_tag="VIY07_08590"
     CDS             1245..2573
                     /gene="paaK"
                     /locus_tag="VIY07_08590"
                     /EC_number="6.2.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007198039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047475 - phenylacetate-CoA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase PaaK"
                     /protein_id="HEY6381847.1"
                     /translation="MPGLQLKGINLAPRRETFDPIETASRDEISALQLKRLQATVSQA
                     YAGVPHYKKAFDAAGVHPDDLKSLNDITKFPFTTKDDLRAHYPFGMFAIPREQVLRVH
                     ASSGTTGKPTVVGYSRKDLDTWAGVMARCMRAAGCQPGMLVQNSYGYGLFTGGIGFHY
                     GAERLGMTVVPVSGGMTERQVRLIADFKPDVIFVTPSYMLAILDEFHAQGVDPRRSSI
                     KIAMCGAEPWTNAMRAEIEDAFDLHAIDNYGLSEIIGPGVSCECIESKDGPHIWEDHF
                     YPEVIDPATGHVLADGEAGELVFTTLTKEAMPIVRYRTRDLSRLLPGTARSMRRMEKV
                     TGRSDDMMIVRGVNVFPSQIEEIILKDQRLAPHFVIELRRADRLDEITVVVEARQDAD
                     AGMFATCERDLAQHIKALIGVTAGVRAVKPGTVERSIGKAKRVIDLRPKG"
     gene            complement(2577..3308)
                     /locus_tag="VIY07_08595"
     CDS             complement(2577..3308)
                     /locus_tag="VIY07_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter family protein"
                     /protein_id="HEY6381848.1"
                     /translation="MIDAAYKALSQMFAPALRHVLLKAVGLALFLIVVIGILLYRLLA
                     AWAETGTNWAEQTAGVAPHGVWSALAWLLSIMAGLGIITGALFLMPAVSAFVGSFFVD
                     QVGEVVEREHYPGEPVGRPLPVLLAVVEGLKVALLALLVYLCALPFFLVAGLGVIMLF
                     LANAYLLGREYFELAAMRFRPPDEAKALRKANSTYLFVAGMVIAAFVSIPILNFATPV
                     FAMAFMVHMHKKLSGSPAALMARPQ"
     gene            complement(3353..4165)
                     /locus_tag="VIY07_08600"
     CDS             complement(3353..4165)
                     /locus_tag="VIY07_08600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiX/YebB-like N1pC/P60 family cysteine
                     hydrolase"
                     /protein_id="HEY6381849.1"
                     /translation="MGWMVDGVGRLLAHYLEKPVQGYEPFTPSDPDALRATLQPGDVL
                     LVEGNNHISGVIKYLTQSTWSHAALYVGPIGDRATSDGEPLVLVEANLGQGVTAAPLS
                     KYARFHTRICRPTQLDDDDRARVCAYAAERIGFDYDLKNIIDLMRYLFPLPVPQRWRR
                     RMMALGSGHPTRIICSALIAQAFETVRYPILPKVTLVESKAARREILEIRHSSLYAPR
                     DFDISPYFEVVKPTIVHGFNYKSVAWADRQRPVAEAIPAVVPTHDDRLSPVA"
     gene            4387..>5099
                     /locus_tag="VIY07_08605"
     CDS             4387..>5099
                     /locus_tag="VIY07_08605"
                     /inference="COORDINATES: protein motif:HMM:NF024842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6381850.1"
                     /translation="MWGLSRRSFLAASAAFVAAPALVRAQTTAEADVAIIGAGAAGIA
                     AARRIAAAGRRFVLFEASNRVGGRCLTDLTSFGVPFDLGAHWIHRPDTGSFTGTTSTS
                     GLDIYSAPRGQTVRIGPRNARDAELESFLATLVRSRRAIVDAGRGRNDIPAARALPAD
                     LGDWRSTAEFVLGPFAYSKDLAAISAVDIGRAGERENDAFCRQGYGAVLASLAAGLPV
                     RLSTPVARLEWDRSGVTIVT"
BASE COUNT         1037 a         1498 c         1598 g          966 t
ORIGIN      
        1 acgtagcccc gagcagaaac tggcggcgga ggtcatactt tcagcttgtc gacgggcgcg
       61 ggaagatttt ctgcagcggc atgccgggac catctaccgc aagttgacga aaaatctggc
      121 cgatttcgta cgcgtcgatg atctcgtcta tggcgccgcc aggctggtcc caggtttgac
      181 cccgacacac aagcaggtcg acgccgaaag ttcgctgatg caggccgaaa aggaaggtgt
      241 cgaagtcgat cagggtattt tcctctcgca agtcctcgcg gtaccggacg caggcatgca
      301 tttgtgcaaa tcgatgctgc ttccgaagcc tgaagcgctc gagcgtatgg ccgagttcgt
      361 caagggcggc acaatagatt ttggccccgc caaggtcgaa cgacagggca aggcggcggt
      421 ggtcacggtc tgcaatccac gatttctcaa tgcggaagat gacaacacgc ttgatgacac
      481 ggaaaccgcc gccgacatcg ccatgcttga tccaatgagc gaaatttgcg tgctgcgcgg
      541 cagcgtggtg gaccatccca ggtaccgcgg ccgaaagatt ttttccgcgg gcataaacct
      601 gacacatctc tatcgcggaa agattcctta cctttggtat atccgccgcg atatgggcat
      661 cgtgaacaag atgttccggg gtctcgcgct cgtcggttca aaccccgacg agatttatgg
      721 aggcacgcga gaaaagccgt gggtcgccgg cgtggacgtt tttgcgatag gtggtggctg
      781 ccaatatctt ctcgccatgg actacgttgt tgccggtagc gatgcctaca tgacgctgcc
      841 tgcacgcaag gaaggcatca tacccggtgc cgcgaatttg cgtttgacgc gtttcgttgg
      901 cgcgcgggcg gcgcggcagg ccatcatgat gggccgtcgc ttcgagtgcg acagcccgga
      961 aggacgcatg atctgcgatc tcattgtgcc gcccgatgag ttggacgcag cgattgcgcg
     1021 cgtgatcgac gatttcactg gctccggcgt ggttagcgcg gcgggtaacc gacgggcatt
     1081 tcgcgtgggc gaagaaccac tcgatacatt ccggcgctac atggcagtct attgccgtga
     1141 gcaggcgtat tgccatttca gcccggccct catcgcaaat ctcgaaaaat actggaacgc
     1201 cgcgcagcgg aaaatctagc gacgacagca cgccgggagg acgcatgccg ggtttgcagc
     1261 ttaagggcat caacttggcg ccgcgccgcg agacgttcga tccgatcgag acggcatcac
     1321 gcgacgagat cagcgcgcta caactcaagc ggctccaagc gacggtcagc caagcctatg
     1381 ccggcgtccc gcactacaaa aaagctttcg atgccgcggg cgtgcatccg gacgacctta
     1441 agtccttgaa tgacattacg aaatttccgt tcacgaccaa ggacgatctg cgtgcgcact
     1501 atccattcgg gatgttcgcc atcccgcgcg agcaggtgct gcgcgtgcac gcctcgtcgg
     1561 gcaccaccgg caagccgaca gtggtcggct acagccgaaa agatctcgac acctgggccg
     1621 gagtgatggc gcgctgcatg cgtgcggcgg gatgccagcc cggaatgctg gtgcagaact
     1681 catacggcta cggcctgttt accggcggga tcggatttca ttatggtgcc gagcggctcg
     1741 gcatgacggt cgtgccggtt tccggtggca tgaccgagcg acaggtgcgc ctgatcgcgg
     1801 atttcaagcc agatgtcatc ttcgtcacgc caagctacat gctcgcgatc ctcgacgaat
     1861 ttcacgcgca gggcgtcgat ccccggcgga gctcgatcaa gattgcgatg tgcggcgccg
     1921 aaccgtggac caatgccatg cgcgcggaga tcgaggatgc attcgatctg cacgccatcg
     1981 acaactacgg attgtcggaa atcatcggcc ccggcgtttc ctgtgaatgc atcgagagca
     2041 aggatggacc gcatatctgg gaagatcact tttaccctga ggtcatcgac ccggcgacag
     2101 gccatgtgct ggcggatggc gaagctggcg agctagtttt cacgacactt accaaggaag
     2161 cgatgccaat cgtgcgctat cgcacccgcg acctttcccg tttattgccg ggcacagcgc
     2221 ggtcgatgcg caggatggag aaagtcaccg gccgttccga tgacatgatg atcgtgcgcg
     2281 gtgtgaatgt atttcccagc cagatcgagg agattattct caaggatcag cgtctggcgc
     2341 cgcattttgt gatcgagctc cgcagggccg accggctcga cgaaatcacc gtcgttgtcg
     2401 aggcgaggca agatgccgat gccggcatgt ttgccacgtg cgagcgcgac ctcgctcaac
     2461 acatcaaagc gctgatcggc gtgaccgccg gcgtgcgcgc ggtcaagccc ggcacagtcg
     2521 agcgttcaat tggcaaggcc aagcgggtga tcgatctgcg gccgaaaggc tgacaatcat
     2581 tgcggccgtg ccatcaaggc tgctggcgat cctgacaatt tcttgtgcat gtggaccatg
     2641 aaggccatcg caaaaaccgg cgtcgcaaaa ttgaggatgg gtatcgacac aaaagcggcg
     2701 atgaccatgc ctgcaacgaa cagataggtc gaattggctt tgcgcaacgc tttcgcctca
     2761 tctggaggac gaaaacgcat ggcggccaac tcgaaatact cccgtcccag caaataggca
     2821 tttgccagga acaacatgat cacgcccagg cctgccacga ggaaaaacgg cagcgcgcac
     2881 aggtagacaa gaagagccag caaagcgacc ttcagccctt caaccaccgc cagcaggacg
     2941 gggaggggtc ggccgaccgg ttcgccgggg taatgctcgc gctcgacgac ctcaccgact
     3001 tggtcgacaa agaaactgcc gacaaatgcg ctcaccgcag gcatgagaaa gagcgcgccg
     3061 gtgatgatgc ccagacctgc catgatcgaa agcagccagg ccagggcaga ccagaccccg
     3121 tgcggtgcca cgccggcggt ttgctcggcc caattggtgc cggtttccgc ccatgccgcc
     3181 agcaggcgat acagcagtat tccgatcaca acgatgagga agagcgcgag cccgactgcc
     3241 ttgagcagca catggcgcaa agccggcgca aacatctgtg acagggcttt ataggcggcg
     3301 tcgatcatcc ggcacagtta aggcgggttg cagccctggg caaggctgca attcaggcga
     3361 ccggggagag cctgtcgtcg tgcgtcggga ccactgcagg gattgcttcg gcgaccgggc
     3421 gttgccggtc ggcccaagcc actgacttgt agttgaagcc gtgcacgatg gttggtttga
     3481 ccacctcgaa atagggggag atatcgaaat cgcgcggcgc atagagcgag gagtggcgaa
     3541 tctcgagaat ctcccggcgc gccgccttgc tctcgaccaa tgtcactttt ggcagaattg
     3601 gatagcgcac cgtctcgaag gcctgcgcga tcagcgccga gcaaatgatg cgcgtgggat
     3661 ggccggatcc cagggccatc atccggcggc gccagcgctg cggcaccggc aatggaaaca
     3721 gatagcgcat caggtcgatg atgttcttta ggtcatagtc aaagccgatg cgctcggcgg
     3781 cgtaagcaca aacccgcgcg cgatcgtcgt cgtcaagctg cgtcgggcgg cagatacggg
     3841 tgtggaagcg ggcatatttg gacagcggtg cggcagtaac gccctgtccc aggttggctt
     3901 ctacaaggac caaaggttcg ccgtcggacg ttgcacggtc gccaatcggg ccgacgtaca
     3961 acgctgcatg cgaccaggtg gactgagtga ggtatttgat gacgcccgag atgtgattgt
     4021 ttccttccac caggagcacg tcgcccggct gcaacgtcgc gcggagggca tcgggatccg
     4081 acggcgtaaa cggctcgtag ccttgcacgg gcttttcgag atagtgggct aaaaggcgcc
     4141 cgactccatc gaccatccaa cccatgaccg atcctcggcg ccattttctt ggcgctgtcg
     4201 aggttccccc tatgcggaac tgtttcccgc gtgacgtcct gcagtgaaat tagtcggaag
     4261 taattgcaat ttcgttcatc tcaccgtggc gcatgctggc cgcggagact tacgaatcgt
     4321 tagccataaa tttgccgcgt aggatgcgtt caggcattct gtccgcagat caagcctttg
     4381 gataccatgt gggggcttag ccgacgttca ttcctcgctg cctccgcggc gtttgtcgcg
     4441 gcgcctgcgc tcgtgcgcgc ccaaaccacc gctgaagcgg atgtggcgat catcggtgcg
     4501 ggagcggcgg gcattgcagc ggcgcggcgc attgctgctg ccggtcgccg ctttgtcttg
     4561 ttcgaggcga gcaatcgtgt cggcggccgt tgcctgaccg acttgacgag tttcggcgtg
     4621 cccttcgacc tcggcgcgca ttggattcat cgcccagaca ccggctcatt taccggcacg
     4681 acctcgacca gcggactcga catatattcc gccccgcgag ggcagacggt tcgcatcggt
     4741 ccacgcaacg cgcgagacgc ggaactggaa agctttctcg ccacgctggt gcgatcgcgc
     4801 cgggccatcg tcgatgccgg ccgcggcaga aacgatatcc ccgcggcgcg ggcattgcct
     4861 gccgatcttg gagattggcg gtcgaccgcc gaattcgtcc tcggtccgtt cgcctacagc
     4921 aaggatcttg cggcgatctc cgcggtggac attgggcgcg cgggcgagcg ggagaacgac
     4981 gccttttgcc gccagggata cggcgcggtg ttggccagcc ttgcagctgg tctgcccgtg
     5041 cggttgtcga cgcctgtcgc gcgcctcgag tgggaccgca gtggcgtgac aatcgtcac
//
LOCUS       DATDHO010000447         3826 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_417341, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000447 DATDHO010000000
VERSION     DATDHO010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3826
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417341"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..309
                     /locus_tag="VIY07_08610"
     CDS             <1..309
                     /locus_tag="VIY07_08610"
                     /inference="COORDINATES: protein motif:HMM:NF016424.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HEY6381851.1"
                     /translation="YQVAMEQFVSRGLARNRSQSGVLIFVSLAERYARIIVGTEIAAR
                     VPQNRWQAAVDALIVHMRNGLIADGFIAAIEICGQELAKNFPAGAADRNELPDRIYLI
                     "
     gene            complement(722..2503)
                     /locus_tag="VIY07_08615"
     CDS             complement(722..2503)
                     /locus_tag="VIY07_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015441 - ABC-type beta-glucan transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015775 - beta-glucan transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan ABC transporter ATP-binding protein/
                     permease"
                     /protein_id="HEY6381852.1"
                     /translation="MNLLRLYARVLSLLGSEGKLAWFLALGNLALATAQFAEPVLLGR
                     IIDTLTGVQTRGAMPEWPKLAMLLGAWAGFGIFTIVCGTLIALYADRLAHRRRHVVST
                     GYFEHVLQLPLSYHGNTHSGRLMKMMLSGTEALWSLWVGFFRDNLASLISLLVLLPIS
                     LFVNWRLALLLIVLCVVFAALTAMIVRKTETMQSSVERHYSDLAERASDALGNIALVQ
                     SFSRLEAEVTALRLVVERLLSAQMPVLSWWALANVLTRTATTMTVLSIIIVGTLLTMN
                     GQATVGEMVTFMNFAALIIARLEHSVSFLNTVVSEAPRLREFFQVWDTVPSIRDEPNA
                     IDPGRLRGEVEFRHVSFSYDGKRMAVEDLNFKAMPGETVALVGATGAGKSTAIALLHR
                     AFDPQAGHIEIDGTDIRKFKLSALRRNIGVVFQETLLFNRSIAENLQVGKPDATEAEM
                     RSAVERAQALEFIERKFQGFDDNVGERGRALSGGERQRLSIARALLKDPPILILDEAT
                     SALDTDTEAKVMLALDEVMKGRTTFVIAHRLSTVRKASRILVFDRGKIVEKGTFEELV
                     NAGGRFARLAQQQFISAEPIGYPIAVK"
     gene            2670..3314
                     /locus_tag="VIY07_08620"
     CDS             2670..3314
                     /locus_tag="VIY07_08620"
                     /inference="COORDINATES: protein motif:HMM:NF016270.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEY6381853.1"
                     /translation="MEAEIGDWQREAESPIKVLKTTIVGGLLFLLPLVLVVLLLSHAL
                     RFAGKAVGPISEFLTLDKVFGPAAEESLAVLILVFISLAAGLIARTRFGRDIMRWTEN
                     SFLGGLPQYRLVKSVAEGFAQIENAENLKPVLVNIEEGWQIGYLLESLQTGWVVVFVP
                     QAPTPMSGNVMYLPEGRVRPLAISMVETMSLVKHMGIGSSKALATANLALPKAV"
     gene            3449..>3826
                     /locus_tag="VIY07_08625"
     CDS             3449..>3826
                     /locus_tag="VIY07_08625"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY6381854.1"
                     /translation="MFRLISLLLTLLFAPGAYAQSEIPPDSRLKAIASTKAIKIAYRR
                     DARPFSFVNDSNEPVGFAIDICKLVAGSIGRQLGVGDLKIDWVPATLQTRFSTVASGK
                     ADMECGSSTVTLGRMKEVDFSNFY"
BASE COUNT          863 a         1074 c         1111 g          778 t
ORIGIN      
        1 taccaggtcg ccatggagca attcgtcagc cgtgggctcg cgcgcaacag gagccagtcc
       61 ggcgtgctga tctttgtttc gctcgccgag cgttatgcac gcatcattgt gggtaccgaa
      121 atcgccgccc gcgttcccca aaacaggtgg caggccgcag tcgatgctct gattgtccac
      181 atgcgaaatg gcctgattgc agatggtttc attgcggcga tagaaatttg cgggcaggaa
      241 ctggccaaga actttcctgc cggcgctgca gatcgcaacg aactccccga tcggatttat
      301 ctgatttaag gcgttggtcc ctttgggaac ccggcacgct tgccagcatt atcaaaggct
      361 cccaacgaga gagggattga tggtcaaaac ggtagcaaca cggacgaaac gagcgatcca
      421 gaacgtggcg caacgcagca tcgaaggggc acggtcggta gcgggcgaag cgcttggggc
      481 ggcggcgaca gccgcgactg acgttgtgct tgaatcaacg gccaatgcgc tggaagccgg
      541 acgagtgagg atcaatcaat cgacgcctgc ggtgaaacgg gcggtcggaa gagcggccac
      601 aaaaacagtg agcagacccg ctcgaagaaa gacgaaggcg accggcagac ggaagaccag
      661 cagcagaaag ctgagagcga ggacgaagcg tcggcgtcga aaatagcgcg gagattgcgc
      721 tctatttcac agcgatcgga tagccgattg gctcggccga aatgaattgc tgctgcgcaa
      781 gccgggcaaa tcggccgccg gcgttcacaa gctcctcgaa ggtgcccttc tcgacaattt
      841 tacctctgtc gaagacaaga atgcgggacg ccttgcgcac ggtcgagagc ctgtgcgcga
      901 taacaaaggt ggtgcgaccc ttcatcacct cgtcgagcgc gagcatgacc ttggcttcgg
      961 tgtcggtatc gagtgcgctg gtagcctcat cgagaatgag aatgggcgga tccttcagca
     1021 gtgcacgcgc aatcgacaat cgctgacgct cgcccccgga cagcgcccgg cctcgctcgc
     1081 ccacgttatc atcgaagccc tgaaatttgc gctcgatgaa ttccagggcc tgcgcgcgct
     1141 cgaccgcact gcgcatctcc gcttccgtcg catcgggttt tccgacctgc aggttttctg
     1201 cgattgaacg gttgaaaagg agcgtttcct ggaacaccac cccgatgttg cggcgtaacg
     1261 ccgaaagctt gaatttgcga atatcggtgc cgtcaatttc tatatgcccg gcctgcgggt
     1321 cgaatgcgcg atgaagcaac gcaatcgccg tggatttgcc ggcgccggtc gcgccgacca
     1381 aggcaactgt ctcacccggc atggccttga aattcaggtc ctcaacggcc atgcgcttgc
     1441 catcgtacga aaatgaaacg tgcctgaatt cgacctcgcc acgcaggcgt ccggggtcga
     1501 ttgcgtttgg ctcgtcgcga atggacggga cagtgtccca aacctggaaa aattcgcgca
     1561 ggcgcggcgc ttccgacacc accgtattca ggaagcttac actgtgctcc agccgcgcga
     1621 tgatcagagc ggcaaaattc ataaacgtga ccatttcccc gaccgtcgcc tgaccattca
     1681 tagtgagcag cgtgcccacg atgatgatcg aaaggacagt catagtggtg gcggtccgcg
     1741 tcaacacatt ggcgagcgcc caccaggaaa gcaccggcat ctgcgccgac agcaggcgtt
     1801 cgaccacgag ccgcaacgcg gtcacttccg cctcaagtcg tgaaaagctt tgtaccagcg
     1861 cgatgttgcc caatgcgtca gaggcgcgct ctgcaagatc ggagtagtga cgctcgaccg
     1921 aactctgcat tgtctctgtc ttgcgtacga tcattgctgt gagtgccgcg aacacgacgc
     1981 acagcacgat caggagcaaa gcgagccgcc aattcacaaa gagcgagatc ggcagcagca
     2041 ccagcaagga aatcagcgaa gcgaggttgt cacggaagaa tccgacccag aggctccaga
     2101 gcgcctcagt gccgctgagc atcatcttca tcaaccggcc cgaatgggta ttgccgtgat
     2161 aggaaagggg aagttgaaga acatgctcga agtagcctgt cgaaacgacg tgacggcgcc
     2221 ggtgcgccag acggtcggcg taaagcgcga tcagcgttcc gcagacgatc gtgaaaatgc
     2281 cgaagcccgc ccatgcgccg agcagcattg ccagttttgg ccactccggc atcgctccgc
     2341 gggtctggac tcccgtcagg gtatcgatga tccgtccgag cagcaccggt tcggcaaact
     2401 gcgcggtcgc caacgccaga ttccccagcg ccaaaaacca tgccagcttg ccctcggaac
     2461 cgagcagcga caaaacacgc gcgtagagac ggagcaggtt catagttgta tcgcagtcgg
     2521 attcaaaacc caccgaaaac ttgccatgga aaatattaca ccatcattct gctcgcctgt
     2581 cttcctgagc cgccaaccga tggatttgac gaatacagtc tgacttcaag cggctaaaat
     2641 cccttcgaca tcttttgaag ttcccggcga tggaggcgga aattggtgat tggcagcgag
     2701 aagcggagag cccgataaaa gtcctgaaaa ccacaatcgt cggagggtta ttgtttctct
     2761 tgccattggt tttggtcgtg ctccttctta gccatgccct gcggttcgcc ggcaaagcag
     2821 ttggcccaat ttccgaattc ttgacattgg acaaagtgtt cggtcctgca gccgaagaaa
     2881 gcctcgcagt gctgatattg gtgttcatct cgcttgcagc cgggctcatt gctcgcacgc
     2941 gctttggccg tgacatcatg cgttggacgg aaaattcatt tcttggtggg ctcccgcaat
     3001 atcggctggt aaaaagtgtt gccgagggtt ttgctcagat tgaaaacgcc gaaaacctga
     3061 aacccgttct cgtgaatatc gaggaagggt ggcagatcgg atatttgctg gaatcacttc
     3121 agaccggctg ggttgttgtc ttcgtccccc aggcaccgac gcccatgtcg ggtaatgtaa
     3181 tgtatctgcc agaaggacgc gtgcggcctc tggccatctc aatggtggag accatgtcac
     3241 tcgtaaagca catggggatc ggttcttcga aggctcttgc caccgcgaat ctcgcgcttc
     3301 ccaaggctgt ctagatcaag ttgacatcag gtccgggctt cccgtggagg cattgcggtt
     3361 ttttaatccg cattgatctc gatcaattcg tctggcctga ttgctcgata caggcatggg
     3421 tgcaatgcat gcgacagcgg ggaagaccat gttccgattg atttcgttgc tcctgacttt
     3481 gttgtttgcg cccggcgctt acgcgcagag cgaaataccg cccgacagcc gcctgaaggc
     3541 gatcgccagc acaaaggcga tcaagatcgc ttataggcgg gatgcgcggc cgttttcgtt
     3601 cgtgaatgac agtaacgaac cggtcggttt cgcaatcgat atctgcaaac ttgttgcagg
     3661 ttctatcggc cggcagttag gcgttggcga tcttaagata gattgggtgc cggcgacgct
     3721 tcagacacgc ttttcgaccg tggccagcgg caaggccgac atggaatgcg gatcaagcac
     3781 ggtgaccctc ggccgcatga aagaagtcga tttttccaat ttctac
//
LOCUS       DATDHO010000448         1947 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_219521, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000448 DATDHO010000000
VERSION     DATDHO010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1947
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_219521"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1656)
                     /gene="mnmG"
                     /locus_tag="VIY07_08630"
     CDS             complement(<1..1656)
                     /gene="mnmG"
                     /locus_tag="VIY07_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEY6381855.1"
                     /translation="MANRFDVVVIGGGHAGCEAAAAAARMGARTALITHRFATVGAMS
                     CNPAIGGLGKGHLVREIDALDGLMGRVADLGGIQFRVLNRRKGPAVRGPRAQADRKLY
                     AVAMQAAIRAIPNLEIIETEADDLVLENGRIAGIKTSESREIAAGAAVLTTGTFLRGL
                     IHIGEKQIPAGRVGEGPAIGLSHTLERLGLRLGRLKTGTPPRLDGRTIDWSVLEMQPG
                     DDPPEPFSALTTRIENPQVECGITRTVEATHKIIRENVHRSPMYSGQIASRGPRYCPS
                     IEDKIVKFGERDGHQIFLEPEGLDDHTIYPNGISTSLPEDVQHALVATIPGLQNARFI
                     RPGYAIEYDYVDPRELAPTLQTRRLRGLFLAGQINGTTGYEEAAAQGLLAGLNAAALA
                     GEGSEIVLDRAQAYIGVMVDDLVTRGVSEPYRMFTSRAEYRLQLRADNADQRLTDRGI
                     EIGCVGADRARAHREKSVALEDARVFAKSVSLTPKEAERHGLSLNKDGQRRTAFELLS
                     YPGVTVTDLAKIWPRFGELAPKIAEQIEIDAKYDVYLSRQTADI"
     gene            complement(1795..>1947)
                     /locus_tag="VIY07_08635"
     CDS             complement(1795..>1947)
                     /locus_tag="VIY07_08635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEY6381856.1"
                     /translation="RGALGHDIASQEDLLAEELQTAARALGRLTGRVDVEDILDVIFR
                     DFCIGK"
BASE COUNT          391 a          609 c          556 g          391 t
ORIGIN      
        1 gatgtcagcc gtctgacgag agagataaac gtcatacttg gcatcgatct cgatttgctc
       61 ggcgatcttg ggtgcgagct cgccaaagcg cggccagatc tttgcaagat cggtgactgt
      121 cacgcctgga taggacaaca attcgaaagc cgtgcgacgt tgtccgtcct tgttgagcga
      181 cagtccatga cgctccgctt ctttcggcgt cagcgaaacc gattttgcaa acacgcgcgc
      241 gtcttcaagc gcgactgatt tttctcgatg cgcccgcgca cgatcggcgc cgacacatcc
      301 aatctcaatt ccacgatcag tcagacgctg atcggcattg tcggcgcgga gctgcaaacg
      361 atactcggcg cgtgaggtga acattcgata cggctcgctc accccgcgcg tcacgagatc
      421 gtcgaccatc acaccaatgt acgcttgcgc gcgatcgaga acgatctcgc tcccctcgcc
      481 cgccaaagcc gctgcgttta gaccggcaag aagtccttgt gctgcagcct cttcatagcc
      541 agtggtgccg ttgatttgtc cggccaggaa caaaccgcgc aagcgtctcg tctggagcgt
      601 cggcgcgagt tcgcgtggat cgacgtaatc gtattcgatc gcatagcccg gacgaataaa
      661 ccgtgcgttc tgcaaaccag gaatcgtcgc caccaacgca tgctgtacat cttccggaag
      721 cgacgtcgaa atgccgtttg gataaatggt gtgatcgtcc aggccttcgg gctccaaaaa
      781 aatctggtgc ccgtcgcgct cgccgaattt tacgatcttg tcttcgatcg acggacaata
      841 acgtggcccg cggcttgcga tctgccccga gtacatcggc gagcgatgca cattctcgcg
      901 tatgatcttg tgggtcgcct caacggtccg ggtgatgccg cattcgactt ggggattttc
      961 gatgcgagtt gtgagagccg aaaacggctc cggcggatca tcgccgggct gcatctcgag
     1021 tacggaccag tcgatcgtgc ggccgtccag ccgcggcggc gttccggttt tcaggcgacc
     1081 gagccgaaga cccaacctct ccaacgtgtg tgagaggcct atcgccggtc cctcgcctac
     1141 ccgaccggcc ggtatttgct tttcgccgat atgaataaga ccccgcaaga acgtgccggt
     1201 cgtaagtaca gcggcgccgg ccgcaatctc gcggctttcc gatgttttga tgccagcaat
     1261 ccggccgttc tcgaggacca ggtcgtcggc ttcggtctcg atgatctcga ggtttggaat
     1321 agcgcggatc gcggcctgca tcgcaaccgc gtaaagcttg cggtcggcct gggcacgcgg
     1381 gccacgcaca gcgggtccct tgcggcggtt caagaccctg aactgaattc cgccaaggtc
     1441 cgcgacgcga cccataagac cgtcgagcgc atcgatttca cgaaccagat gacccttgcc
     1501 gagcccgcca atggccggat tgcaagacat cgctccgacc gttgcgaacc gatgcgtaat
     1561 caaagccgtc cgggcaccca tgcgcgcggc cgcagctgcg gcttcacagc cggcgtggcc
     1621 gcctccaatc accacgacgt cgaatcggtt ggccatcgat acctcggaag gcgcggtttt
     1681 agcggaggcc cccgtagcgg tcaaaaccac ccgtttccgc caaatgtttc acgtgaaaca
     1741 ccgggcagta tcgaccaggg tcagcaagcg ggatgaaggc agggcctgtc agccttactt
     1801 accaatgcag aaatcgcgaa aaatgacgtc gagaatatcc tcgacatcga cccttccggt
     1861 cagtcggcca agggctcgtg cggcagtttg caactcctcg gccagcagat cctcctggct
     1921 cgcgatgtcg tgccctaatg ccccgcg
//
LOCUS       DATDHO010000449         3396 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_169780, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000449 DATDHO010000000
VERSION     DATDHO010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3396
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169780"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="VIY07_08640"
     CDS             <1..180
                     /locus_tag="VIY07_08640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381857.1"
                     /translation="IDRVRGELNRAFEKTRADLECVEILAAGLAAFSKPVPTYEPRFR
                     HLPQPGLSAHELPSD"
     gene            482..2911
                     /gene="gyrB"
                     /locus_tag="VIY07_08645"
     CDS             482..2911
                     /gene="gyrB"
                     /locus_tag="VIY07_08645"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009330 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) complex [Evidence
                     IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEY6381858.1"
                     /translation="MAEPARRNPSDYGAESIKVLKGLDAVRKRPGMYIGDTDDGSGLH
                     HMVYEVVDNAIDEALAGFATEVAVTLNPDGSCTVRDNGRGIPTDIHKGEGVSAAEVIM
                     TQLHAGGKFDQNAYKVSGGLHGVGVSVVNALSTWLKLTIWRDGKEHFMEFREGVAKAP
                     LKARGDAKGQSGTEVTFLPSPKTFTMVEFDFATLGHRLRELAFLNSGVAIVLSDQRHA
                     VEKREEMKYEGGVEAFVKFLDRNKTALIPSPIMIKSEREGITVECALWWNDGYHESVL
                     CFTNNIPQRDGGTHLAGFRGALTRQITQYAETIGTSRKEKVALTGDDCREGLTAVLSC
                     KVPDPKFSSQTKDKLVSSEVRPVVENVINQALQDWFEIHPQEARVIVGKVVEAAAARE
                     AARKARELTRRKGALDVSSLPGKLADCQERDPAKSELFIVEGDSAGGSAKQGRNREFQ
                     AVLPLRGKILNVERARFDKMLSSQEIGTLITALGTSIGRDEFNPDKLRYHKIIIMTDA
                     DVDGSHIRTLLLTFFFRQMDELIKRGHIFIAQPPLYKVTRGKSEQYLKDERSLEDYLI
                     TAGLEDAVLRLASGEDRGRADLRKLTEDARTIRGILGGLHSRYNRKVIEQAAIAGVLN
                     PGVTGDAKKGAAAATYIAKRLDALEEETERGWNGTFDDGGFHFERTVRGVKEVAVIDQ
                     ALIGSADARKLDEFAASLQQVFPRPTPPAMLRRKDETIAIHGPVGLFEALIAAGRKGL
                     TLQRYKGLGEMNPEQLWETTLDVNARSLLQVRIKEVDEANVLFDQLMGDLVEPRRQFI
                     QDNALSASVDV"
     gene            complement(2929..3321)
                     /locus_tag="VIY07_08650"
     CDS             complement(2929..3321)
                     /locus_tag="VIY07_08650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381859.1"
                     /translation="MGKIILAVLALGFAASFAGAADAADIYRSGWRSHVWYGSDCCRR
                     NEPYGPGIRVAEQVPYCGDCDNLIGPNYFNNNQLRYIGYLPWTRGCALGGCYGNFGDY
                     GGCYFREISVAEGRGRWIDGVEMICNGR"
BASE COUNT          766 a         1014 c         1005 g          611 t
ORIGIN      
        1 attgacaggg tgagaggcga actcaatcgc gcgttcgaaa aaactcgcgc cgatctcgag
       61 tgcgtcgaaa ttttagcggc tggcctcgcc gccttcagca agccggttcc aacctacgaa
      121 ccccggttcc ggcatttgcc gcagccgggt ctcagcgcgc acgaactgcc gtcggactaa
      181 aagtctgcag acttgccccg cggtgggtgc aaggcagcca tgacaatagc gccgtcagaa
      241 gtgccaaaaa cgatatcaac ctcaaccgat ccgatggcgc gtcaatcggc tgcgcgtgct
      301 gacctgattc gcgttgaaaa cgacgcgaaa aaagtgggga tttttccgac cctgctcttt
      361 aaaaaccgct gctagatcaa catattaagc taagatactt tgccctgtac gacgcccaat
      421 tttcgtgtca gacaaatcac tcaatccgac tcaaatttcc accccttcga gggcgccgct
      481 gatggctgaa ccggcccgca gaaatccatc cgactatggc gcggagtcaa tcaaggtcct
      541 caagggcctt gatgccgtac gcaagcggcc gggcatgtac atcggcgata ccgatgacgg
      601 ctcgggcctg caccatatgg tctatgaggt cgtcgacaat gcgatcgatg aggcgctcgc
      661 aggattcgcc accgaagtcg ccgtaacgct caatccggat ggttcctgca cggtgcgaga
      721 caacggtcgc ggcatcccga ccgacattca caagggcgaa ggcgtctcag cagcggaagt
      781 catcatgacg cagctgcacg ccggcggaaa attcgaccaa aacgcttaca aggtttcggg
      841 tggcctgcac ggcgtcggcg tctcggtggt gaacgccctg tcgacctggc tgaaactcac
      901 catttggcgc gacggcaagg aacacttcat ggagttccgc gagggcgtcg caaaggcgcc
      961 gctcaaggcg cgtggcgatg cgaaaggcca gagtggaacc gaagtcacgt tcctgccctc
     1021 cccgaagacc ttcaccatgg tcgagttcga ttttgccacg ctcgggcatc ggctgcgcga
     1081 actggcgttc ctgaattcag gggtggccat tgttctctcc gaccagcgtc acgccgtcga
     1141 aaaacgcgag gagatgaaat acgaaggcgg tgtcgaagcc ttcgtgaaat tcctcgatcg
     1201 caacaagacc gccctcatcc ccagccccat catgatcaag tccgagcgtg aagggattac
     1261 ggtggagtgc gcgctgtggt ggaacgacgg ctatcatgaa agcgtgctct gcttcacaaa
     1321 caatattccg caacgcgacg gcggtactca ccttgccgga ttccgcggcg cgctgacgcg
     1381 gcagatcact caatacgcgg aaacgatcgg tacctcgcgg aaggaaaaag ttgcgctgac
     1441 cggtgacgat tgccgggagg ggctgaccgc ggtgctgtcc tgcaaggtgc cggatccaaa
     1501 attttcgtcg cagaccaagg acaagctggt gtcctccgaa gtgcgtccgg ttgtcgaaaa
     1561 cgtcatcaac caggcgctgc aggactggtt cgagattcat cctcaggaag ccagggtcat
     1621 cgtcggcaag gtggtggagg ctgccgcggc ccgggaagca gcgcggaaag cgcgcgaatt
     1681 gacccgccgc aaaggtgcgc tcgatgtctc ctcgttgcca ggcaaactgg ccgattgcca
     1741 ggagcgtgac ccggcgaaat cagaattgtt cattgtcgag ggtgacagcg cgggcggttc
     1801 agccaagcag ggtcgcaacc gcgaatttca ggcggtgctt ccgctgcgtg gcaagattct
     1861 caacgtcgag cgcgcgcggt tcgacaagat gttgtcaagt caggaaatcg gaacgttgat
     1921 cacggcactc ggaaccagca tcgggcgcga cgagttcaat cctgacaagc tgcggtacca
     1981 caagattatc atcatgactg acgcggatgt ggatggctcg cacatccgca cgctgctgct
     2041 gacgtttttc ttccgccaga tggacgagtt gatcaagcgc ggccatatct tcatcgccca
     2101 gccgccgctt tataaagtca cgcgcggaaa atccgagcaa tatctcaagg acgagcgctc
     2161 gctcgaggat tacctgatta cggccggtct cgaggatgcc gtgctccggc tcgcctcagg
     2221 cgaggaccgc ggacgcgccg acctgcggaa actgaccgaa gacgcgcgca cgatccgcgg
     2281 catcctgggc ggcctgcaca gccgctacaa ccgcaaagta atcgaacaag cagcgatagc
     2341 cggcgtgctc aatccgggcg tcaccggcga tgcgaaaaaa ggcgctgcgg cggcaaccta
     2401 cattgcgaaa cggctcgatg cgctggaaga ggaaaccgag cgtggctgga acggcacgtt
     2461 cgacgacggc gggtttcatt tcgagcgcac agtccgcggc gtcaaggaag ttgcagtcat
     2521 cgaccaggcc ctgatcggct cagcagatgc gcggaagctc gacgagtttg ccgcttcgct
     2581 gcaacaggtt ttcccgcgac cgacaccgcc ggcgatgtta cggcgcaagg atgaaaccat
     2641 tgcaatccac ggacccgttg gtctgttcga ggcgcttatc gctgccgggc gcaagggcct
     2701 cacgctgcag cgttacaaag gtctgggcga gatgaacccc gagcaattgt gggagacaac
     2761 gctcgacgtc aatgcaaggt cgctgctgca ggtccgcatc aaggaagttg acgaagccaa
     2821 tgtgctcttc gaccagttga tgggcgatct ggtcgagccg cgcagacaat tcatccagga
     2881 caacgccctg tcggcaagcg tcgacgtctg atcgagcgcc gacgcctcct atctcccgtt
     2941 gcagatcatc tcgacgccgt cgatccacct gccccggcct tcggccaccg atatttccct
     3001 gaagtagcag ccgccgtaat cgccaaaatt gccgtaacaa cccccgaggg cgcagccgcg
     3061 cgtccacggc agatacccga tgtagcgaag ctgattgttg ttgaagtagt tcggaccaat
     3121 gagattgtcg caatcgccgc aataaggaac ttgctcggcg acacggatcc cgggaccgta
     3181 gggctcgtta cgacggcagc agtcgctgcc gtaccagacg tgcgagcgcc aaccggaccg
     3241 gtaaatgtct gcggcatcgg cggctcccgc aaacgaagca gcgaagccga gcgccagtac
     3301 agccaatatg atcttaccca tgaggaacac cctgctcaga cctggcgcaa tcatatccgg
     3361 aaccccgaag aaatttcggg gaacattccg tcatag
//
LOCUS       DATDHO010000450         4863 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_367374, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000450 DATDHO010000000
VERSION     DATDHO010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4863
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_367374"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..772
                     /locus_tag="VIY07_08655"
     CDS             <1..772
                     /locus_tag="VIY07_08655"
                     /inference="COORDINATES: protein motif:HMM:TIGR01730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY6381860.1"
                     /translation="STLEQSQRDVERYKELAARNATPIVTLNNAQTAVNVSRATAESN
                     RAQLENLKVQLDFCSIRAPISGRISMANVKVGNFVRQADTTPMATINQMIPVYVSFSV
                     PQKNLPDIRKAISAETATVEAIVPGEQKRAIGQVTMIENTVDTATGMAMVRATMPNQD
                     ELLWPGTLVNTEMTLRNDEGVVVPSNAVQISQTGTFVFVVKDGAAQIQPVKVDRTVGT
                     ESVIASGLNGGETVVTEGQLLLSNGTRVNPRPPKVAGN"
     gene            776..3901
                     /locus_tag="VIY07_08660"
     CDS             776..3901
                     /locus_tag="VIY07_08660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6381861.1"
                     /translation="MNISETCIRRPVLTTLVTASLIVFGIFAYRLLPVAALPAVDFPT
                     IQITAQFPGASPETMASSVAAPIERQLSTISGISSMNSTSSLGLAQITIQFDLGRNID
                     GAALDVQTALATAARLLPIEMTTPPSFRKVNPGDFPVLYISLRSDTVPLSTINDYAET
                     VLAPQISQLPGVAQVLIYGAQKFAVRVQVNPTEAAARNISLEDVRSVVATANSSTPVG
                     VLTGPKQSVTLAATSAMPHAADYRDVVVAYRNGSPIKLNQIARVIDSVENDKIATWYN
                     GERAIVLAIQRQPDANTVQVVDLVRQNMPTMRAQVPPSIQMETLFDRSLSIRAAVVDV
                     QETLAIAISLVILVIFLFLRKVSATIIPALAVPVSLIGTFAAMYAFGYSINNMTLLAL
                     TLSVGFVVDDAIVMLENIVRHVEGGMRPFEAALKGSREIGFTIISITFSLIAVFIPVL
                     LMGGMVGRVFREFAVSIAVAIVVSGFVSLTLTPMLCARVLRAHRPEGEKQFFPLRIFE
                     RFFEGMLSAYQWTLDRVLAFKSVMLGVTIATFFATIVLYVVVPKGFFPTEDTGYVIGI
                     TEGATDVSFPALSDLQRKVAEVVRADPAVAYVNSTVGTGGPNSVGNSGRMLVALKPRK
                     ERDSLQTILARLRQTANVVPGIAIYFQPIQNINLGGRLAKSQYQYTLQSNDTASLYRV
                     APEMREKVSRIPGLLDVTTDLYVTNPQITIEVDREKAAVYGVTVDQVRQELYNAFGVR
                     QVATIYSPVNYYQVILETQPDFQIGPDDLARVYLKTSNGTAVPLSAVTRFERTVGPLT
                     VNHQGQQPAVTISFNLAPGVSLGQAVDAIQNLEREERLPATITTGFQGTAQVFQDSLR
                     GQGILILAAIFAAYVVLGILYESFIHPITIISGLPSAGIGAILTLMLFKMDLSVIAMI
                     GIVMLVGIVKKNAIMMIDFAIERRRVGLSAEAAIREAAILRFRPIMMTTFAAIFGTLP
                     IALGTGAGAELRQPLGVAVVGGLVLSQLLTLYITPVIYLYLDRFDRLLKRRLEPQLEE
                     VKEAPPAVAAE"
     gene            3994..>4863
                     /locus_tag="VIY07_08665"
     CDS             3994..>4863
                     /locus_tag="VIY07_08665"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6381862.1"
                     /translation="MHNISRRNFVLSATAASAAFGLDGPLEFIGSAQAQSYSNAKLVD
                     KGFHKFKVGNVEVTQIYDGIWNRNFEDTFVKNAPPDQVKGALKGAGLADNIIPIPFTV
                     TVVKMKDQYVMFDSGTGGQFQPQTTGLMSAKNMKAAGIDPEKIKTIVVSHFHPDHIFG
                     LMAKDTNAQIYPNATIYLPKAELAFWTGSSVPQPAQGISNRVKATFPSWKNVQQIDGD
                     KEIVPGVRAIATPGHTPGHTSYLVGSGKQQLLVLGDVTNIPVLFVKNPGWHAVFDADA
                     ALAETNRRKMMDRA"
BASE COUNT          965 a         1513 c         1417 g          968 t
ORIGIN      
        1 gtccacgctc gagcaatcgc aacgcgacgt cgaacgctat aaggaacttg ctgcaaggaa
       61 cgctactccc atcgtcacgc tcaacaacgc gcagaccgcc gtcaacgtct cgcgcgccac
      121 ggctgaatcg aaccgcgcgc agctcgaaaa tctgaaggtt caactcgatt tctgctcgat
      181 tcgcgcaccg attagcggcc gcatcagcat ggccaacgtg aaagtcggaa atttcgttcg
      241 ccaggctgac acgacgccga tggcaacgat caaccagatg attccggttt atgtcagctt
      301 ctcggtgccg cagaaaaatc ttcccgacat ccgcaaagcc atctcggccg aaacggcaac
      361 cgttgaagca atcgtgcctg gcgagcagaa gcgggccatc ggccaggtca cgatgatcga
      421 aaataccgtc gataccgcga ccggcatggc catggtgcgc gccaccatgc cgaaccagga
      481 cgaactgctc tggccgggca cgctggtgaa caccgagatg accctgcgaa atgatgaggg
      541 cgtggtggtg ccctccaatg ccgtccaaat cagccagacg ggcactttcg tttttgtcgt
      601 gaaagacggc gccgcgcaga tacaaccggt gaaagtcgac cgcacggtcg gcaccgaaag
      661 cgtcatcgca tccggcctca acggcgggga aacggtggtc accgagggac agctgctgtt
      721 gtcgaatggg acgcgggtga acccacgtcc gccgaaggtc gcgggcaact gagccatgaa
      781 tatctctgag acctgcatcc gccgcccggt gctgacgacg ctggtgacgg cgtcgctgat
      841 cgttttcggc atctttgcct accgcctgtt gccggtggcg gctttgcccg cggtcgactt
      901 cccgaccatc cagatcacag cgcaatttcc aggcgccagt ccggaaacaa tggcatcgtc
      961 cgttgcagcg ccgatcgagc gtcagctgtc gaccatttcc ggcatctcgt cgatgaattc
     1021 gacgtcctcg ctgggcctgg cgcaaatcac cattcagttc gatctcggcc gcaatatcga
     1081 tggcgccgcg ctcgacgttc agaccgcgct cgccaccgcg gcacgcctgc tgccgatcga
     1141 gatgacgacg ccaccgtcgt tccgcaaggt gaatccgggc gacttcccgg tgctctacat
     1201 cagcctgcgt tccgacaccg tgccactgtc gacgatcaac gattatgcag agaccgttct
     1261 ggcgccgcag atttcgcaat taccgggcgt tgcacaggtt ctgatttatg gtgcgcagaa
     1321 gttcgccgtt cgcgtccagg tcaatccaac cgaggcggct gccagaaaca tctcgctcga
     1381 ggacgtgcgc agtgttgtcg ccacggccaa ttcgagcact ccggtcggcg tgctgaccgg
     1441 accgaagcaa agcgtcactc tggctgctac cagcgcgatg ccgcacgccg ctgactatcg
     1501 cgacgtcgtc gtcgcatacc gcaacggctc tccgatcaaa ctcaatcaga tcgcccgtgt
     1561 catcgacagc gtcgagaatg acaagatcgc gacctggtac aatggcgagc gcgcgattgt
     1621 gctggcgatc cagcgtcagc ccgatgccaa tacggtccag gtcgtcgacc ttgtgcggca
     1681 aaacatgccg accatgcgag cgcaagttcc gccttcgatc cagatggaaa ccttgttcga
     1741 ccgctcgctg tcgattcggg cggcggtggt cgacgtgcag gaaacgctgg cgattgccat
     1801 ttcgcttgtc atcctggtga tcttcctgtt cctgcgcaaa gtgtcggcga cgatcattcc
     1861 ggcgctcgcg gtgcccgtat cgctgatcgg caccttcgct gccatgtacg cctttggata
     1921 ctcgatcaac aacatgacgc tgctggctct cacgctatcg gtcggcttcg tcgtcgacga
     1981 cgccatcgtg atgctggaaa atatcgtgcg tcacgtcgaa ggcggcatgc gtccattcga
     2041 ggccgcgctg aagggctcgc gcgagattgg ctttacgatc atatcgatca ccttttcgct
     2101 gatcgcggtg ttcatcccgg ttttgctcat gggcggcatg gttggccgcg ttttccgcga
     2161 gttcgcggtt tcaatcgcgg tcgcgatcgt ggtctccggg ttcgtatcgc tgacgctgac
     2221 accgatgctg tgcgcgcgcg tgctccgcgc ccatcgccct gaaggtgaga agcagttctt
     2281 cccgttgcgg atcttcgagc gatttttcga gggcatgctg agcgcctacc aatggacgct
     2341 cgatcgcgtc cttgcgttca agtcggtcat gctcggggtc accatcgcaa cgttctttgc
     2401 gacgattgtt ctgtatgtcg tcgtgcccaa gggcttcttc ccgacggagg ataccgggta
     2461 cgtcatcggc attacggaag gtgcgaccga cgtttcgttt ccggcgctgt cggatcttca
     2521 gcgtaaggtg gccgaggtcg tgcgcgccga tccggccgtg gcgtacgtga actcaacagt
     2581 tggcaccggc gggcccaact cggtcggcaa cagcgggcgc atgctggtgg cgctgaagcc
     2641 gcggaaggag cgtgacagtc tgcaaaccat cctggcgcgt ctgcgccaga cggccaatgt
     2701 tgttccgggc atcgccattt atttccagcc gatccagaac atcaatctcg gcggcaggct
     2761 ggcgaagagc caatatcaat acacgcttca gtccaacgac acggcgtcgc tgtatcgtgt
     2821 cgcgcccgaa atgcgcgaaa aagtctcacg cattcccggc ctgctcgacg tcacgaccga
     2881 cctctatgtg accaacccgc aaatcacgat cgaagtggat cgggagaaag cggcggtcta
     2941 cggcgtcacg gtcgatcagg tgaggcaaga actctataac gcgttcggcg tccggcaagt
     3001 cgccacgatc tacagcccgg tgaactacta ccaggtcatt cttgagaccc aacccgattt
     3061 ccagatcggt ccggacgatc tcgctcgcgt gtatctgaag acgtcaaacg gcacggccgt
     3121 gccgctttct gcagttaccc gtttcgagcg caccgtcggc ccgctgactg tcaatcacca
     3181 gggacagcag ccggccgtga cgatttcttt caatcttgcg cccggcgtct cgctaggcca
     3241 ggccgtcgat gccatccaga acctcgagcg ggaagagcgg ctgccggcaa caatcacgac
     3301 cggtttccag ggcactgcgc aggtgttcca ggactccttg cgcgggcagg ggatcttgat
     3361 tctcgccgcc atattcgccg cctacgtcgt gctcggcatc ttgtatgaga gctttatcca
     3421 cccgatcacg atcatttccg gcctgccgtc tgccggcatc ggcgcgatcc tgaccctgat
     3481 gctgttcaaa atggacctgt cggtgatcgc catgatcggc atcgtgatgc tggtcggcat
     3541 cgtcaaaaag aacgcgatca tgatgatcga ctttgccatc gaaaggcgac gcgtaggcct
     3601 gtcggctgag gcggcgatcc gcgaagccgc gatccttcgc ttccgcccga tcatgatgac
     3661 aacctttgcc gcgatcttcg gcacgctgcc gatcgcgctg ggcaccggcg cgggcgccga
     3721 actgcgccaa ccgctgggcg ttgcggtcgt cggaggtctg gtgctgtcgc agctgctgac
     3781 gctttacatt accccggtaa tctatctcta cctcgatcgc ttcgaccggc tgctcaagcg
     3841 tcgccttgag ccgcagctcg aggaagtcaa ggaagctcct cccgcggttg cggccgaata
     3901 accgatacga ataatctacc tgcaagcagg aagcacgccg ggtcaggtgg tgtttatcgc
     3961 ttgggctttc cgccctcagg taaggggagt gcaatgcaca acatctcacg ccgcaatttc
     4021 gtactttcgg ccaccgcggc ctccgccgcc ttcggcctcg acggtccgct cgaattcatc
     4081 ggctccgcgc aggcgcagag ctattcgaac gcgaagctgg tcgacaaggg cttccacaaa
     4141 ttcaaggtcg gaaatgtgga ggtcacacag atctatgacg gcatatggaa tcgcaacttc
     4201 gaggacactt ttgtgaagaa cgcgccgccg gatcaggtca agggcgcgct caagggcgcc
     4261 ggtctggcgg ataacatcat accgataccc ttcacggtca cagtcgtgaa gatgaaagac
     4321 caatatgtga tgttcgactc aggcaccggc ggccagttcc agccacagac cacaggcctt
     4381 atgtcggcga agaacatgaa ggccgctgga atcgatccgg agaagatcaa gaccatcgtt
     4441 gtcagccatt ttcatcccga ccacattttc gggttgatgg ccaaagacac caatgcgcag
     4501 atttacccga acgccacaat ctatctgccg aaggccgagc tcgcgttttg gaccggttca
     4561 tcggtgccgc agccggcgca gggcataagc aatcgggtca aggcgacttt cccgagctgg
     4621 aaaaacgtgc agcaaatcga cggcgacaag gaaattgtgc caggcgtgcg cgcgatcgcg
     4681 acgccgggcc acactccggg ccacaccagc tacctggtcg gctcgggcaa gcagcagttg
     4741 ctcgtgctcg gagatgtcac caacattccc gtgctgttcg tcaagaatcc gggctggcac
     4801 gcggtctttg acgccgatgc ggcgcttgcg gagacgaacc ggcgcaagat gatggaccgc
     4861 gcc
//
LOCUS       DATDHO010000451         2108 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_169844, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000451 DATDHO010000000
VERSION     DATDHO010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2108
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169844"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..372)
                     /locus_tag="VIY07_08670"
     CDS             complement(<1..372)
                     /locus_tag="VIY07_08670"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY6381863.1"
                     /translation="MTRIFPLAIAALIAPSWVVAAPCPGNPQALGTERVIEIDVKSTP
                     RVGRKQFPSTLPLGAKELVLTFDDGPWPGTTPKVLDALKSECVRATFFLLGRNATAYP
                     QLARRVLSEGHTVGHHSYSHPI"
     gene            516..1925
                     /gene="mgtE"
                     /locus_tag="VIY07_08675"
     CDS             516..1925
                     /gene="mgtE"
                     /locus_tag="VIY07_08675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEY6381864.1"
                     /translation="MLDQKEKNGEAEAAQLPRNKDGSIRKTFVKSVARMIEAGDASGL
                     RALVGGLHESDMGDLIEALEPEQRPRLVELLGIDFDFTALTEVDDAVREEILEELPPQ
                     TVAKGVSEMESDDAVAILEDLPKEERAEILDQIPPPERIPIARALEYPEDSAGRRMQT
                     EFIAVPPDWNVGQAIDYMRETTELPDHFYELYVVQHDGHFLGAVPLDRLLRSKRPVPI
                     SSLMDVERHRVSATQDQEEVARLFQRYNWVAAPVTDGEGRLVGVITFDDVADVLEKEA
                     EEDIHALGGITRDEELSDSVWTIARGRFNWLLVNLATAFLASSVLGLFEGQLQKMVAL
                     AVLAPIVASQGGNATTQTMTVAVRALATRDLTDANAWRVIIREVMVGLLNGVAFAVIT
                     GIAAYVWFKVPGLGFVIGLAMICNLVAAALGGILIPLALHRLKIDPAVASSPFVTTVT
                     DVVGFFAFLSIATLWFGLR"
BASE COUNT          397 a          630 c          666 g          415 t
ORIGIN      
        1 aattggatgc gaatagctat gatgcccgac ggtgtgtcct tccgagagga cccgccgcgc
       61 caattgggga tatgctgtcg catttcttcc cagcagaaaa aacgtggcac gcacgcattc
      121 gcttttgagg gcgtctaaca ctttcggcgt ggtcccgggc caggggccat cgtcgaaagt
      181 cagcacaagc tccttggcgc ccagtggcag cgtcgaagga aactgcttgc ggccgacccg
      241 cggcgtactt ttgacatcga tctcaatgac acgctcggta cccagcgctt ggggatttcc
      301 agggcatggc gcggccacga cccaggaggg cgcgatcaaa gcggcgatgg caagagggaa
      361 gatgcgtgtc ataaacgttc ggcagtgtgc aattgaacgc aatgtgtcgc tgacggcaag
      421 cccatcgccc ggtcgcagtt tcagcctctg aacatttgct cccgcgtgaa tgcgggcgta
      481 caagcggcac gcactgtttc gacggcaggt tccgaatgct cgatcagaaa gaaaaaaacg
      541 gcgaggccga agctgcgcaa ctgccgcgca acaaggacgg ctccatccgc aagacctttg
      601 tcaaaagtgt agcgcgcatg atcgaagccg gggatgcgtc gggcctgcgc gcgctggtcg
      661 gcggcctgca cgaatccgac atgggcgacc ttatcgaggc gctggagcct gagcagcggc
      721 cgcggctggt cgaattgctg ggcatcgact tcgatttcac cgcgctcacc gaagtcgacg
      781 atgcggtccg cgaggaaatc ctcgaagagc tgccgccgca gacggtggca aaaggcgtca
      841 gcgagatgga gtccgatgac gcggtggcca tcctcgagga cctgccgaaa gaagaacgtg
      901 ccgagattct cgatcagatc cctccgcccg agcggattcc gatcgcacgg gctctcgaat
      961 atcctgagga ttccgccggc aggcggatgc agaccgagtt catcgccgtg ccgccggatt
     1021 ggaacgtcgg ccaggcgatc gactacatgc gcgaaaccac ggaactgcct gaccactttt
     1081 acgaacttta tgtggtccag cacgacgggc atttcctcgg cgccgtgccc ctcgatcgct
     1141 tgctgcgcag caaacgaccg gtgccgattt ccagcctcat ggacgttgaa cgccatcggg
     1201 tcagcgccac tcaggatcag gaggaggtgg cccggctgtt ccaacgctac aattgggtgg
     1261 cagcccctgt caccgacgga gagggtcgac tggtcggggt cattaccttc gatgacgtcg
     1321 ccgacgtgct cgaaaaagag gcggaagagg atattcacgc cctcgggggc atcacccgcg
     1381 acgaggaatt gtcggactcg gtgtggacca ttgcccgagg acgtttcaac tggttgctgg
     1441 tcaatctcgc caccgcgttt cttgcatcgt ccgtcctggg cctgttcgag ggccagttgc
     1501 agaaaatggt cgccttggct gtcctggcgc ccatcgtggc aagccaaggg ggaaacgcaa
     1561 cgacccagac catgaccgtc gcggtgcgcg ccctggccac gcgtgacctg accgatgcca
     1621 acgcctggcg ggtgatcatt cgcgaagtca tggtcggcct gctcaacggc gttgcctttg
     1681 ccgtcatcac ggggatcgca gcgtatgtct ggttcaaggt gcccggtctc ggctttgtca
     1741 tcggcctggc catgatttgc aacctggtgg cggcggcgtt gggcgggatc ctgattcctc
     1801 tggcgctgca tcggctcaag atcgatcctg ccgtggcttc gagcccgttt gtcacaacgg
     1861 tgaccgacgt ggtcggcttt ttcgcatttc tgagcattgc aaccctttgg tttggcctgc
     1921 gatgagaagc gctaccccgg ttaccagttg ttcaccctgt ttgctgacca acgtttaaag
     1981 cgaaatccgt aaccctgtct gcgtttgccg ccgcgtaggc tgggagcatc ccggtgcccg
     2041 aggtcaatgc tgttgcagcg ggctcgaccc ttggccgctg gctgccgggc tgggcgcgcc
     2101 gtcgtacg
//
LOCUS       DATDHO010000452         2499 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_269458, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000452 DATDHO010000000
VERSION     DATDHO010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269458"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..206
                     /locus_tag="VIY07_08680"
     CDS             <1..206
                     /locus_tag="VIY07_08680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAP2 family protein"
                     /protein_id="HEY6381865.1"
                     /translation="MFGAHFPTDVIFAGVFTYLIIWIAYAIIYRWPRTRLSDDDVDRS
                     LSRLTLPAYDFVAGLFGRKPKSY"
     gene            291..1538
                     /locus_tag="VIY07_08685"
     CDS             291..1538
                     /locus_tag="VIY07_08685"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEY6381866.1"
                     /translation="MAGGRTTKTVKKVVLAYSGGLDTSIILKWLQASYGCEVVTFTAD
                     LGQGEELEPARQKALLLGIKKENIFVEDLREEFVRDYVFPMFRANALYEGQYLLGTSI
                     ARPLIAKKQIKIAEKVGADAVAHGATGKGNDQVRFELTYYALKPDVTVIAPWREWDLT
                     SRSKLIEFAEKHQIPIAKDKRGEAPFSVDANLLHTSSEGKVLEDPAQDVPDYVFSRTV
                     DPEKAPDKPTVVTLDFERGDPVAIDGKRLSPASLLKQLNDLGRANGIGRLDLVENRFV
                     GMKSRGMYETPGGTILLAGRRGIESITLDRGAAHLKDELMPKYAELVYYGFWFTPERE
                     MLQAAIDKSQEFVSGRVRLKLYKGNVTVIGRESKYSLYDQELVTFEEGAVAYDHRDAE
                     GFIKLNALRLRTLGQRRRKLKLD"
     gene            1594..1986
                     /locus_tag="VIY07_08690"
     CDS             1594..1986
                     /locus_tag="VIY07_08690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381867.1"
                     /translation="MTSAFAMSLLACSSGSKKEPEENPNIFPSDYKNEILNTMTSSLD
                     DPTNVRSAYISEPALRPAGKEERYVVCVRSDSRDASKRYTGVKDRIAIFYGGHITQLI
                     DATREQCGNAAYRPFPELENLCQAKKCV"
     gene            complement(2002..>2499)
                     /locus_tag="VIY07_08695"
     CDS             complement(2002..>2499)
                     /locus_tag="VIY07_08695"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY6381868.1"
                     /translation="LRIARSDAQLALVVGHELAHVTLGHLEKRAANELLGQASGMIID
                     QVLLGATVWTGGLFTRELGRAGRLAFSVDFEREADYVGAYYAARAGYDLAGAEEFWRT
                     YSLEMPDSIRAGITHPVTPARFVQLQKVVAEIADKRRRNVQLIPELKVADANTVPMIP
                     AEDTR"
BASE COUNT          581 a          718 c          697 g          503 t
ORIGIN      
        1 tgatgttcgg cgcgcatttt cctaccgatg taatcttcgc cggcgtcttc acctatctca
       61 tcatttggat tgcatacgcc atcatctatc gctggccgcg cacgcgacta tcagatgatg
      121 atgtcgatcg gtcgcttagt cgcttgacct tgccggcgta tgattttgtt gcgggattat
      181 tcggtcgaaa gccgaaatcg tattaagaca actgcaaagg cgggagtact ttgcgcagca
      241 aaactttggc cctatagtcc gcccgcaaat ttcgacgcgg gtgatctaag atggccggtg
      301 gccggacaac aaagacagta aagaaggttg tgctcgccta ttccggcggg ctcgacacct
      361 cgatcattct gaaatggctg caggccagct atggatgcga ggtggtgact tttactgccg
      421 atctaggcca gggcgaagaa ctcgaaccgg cacggcagaa ggcgctattg cttggcatca
      481 agaaggaaaa catctttgtc gaggatctgc gcgaagaatt cgtgcgcgac tatgtcttcc
      541 cgatgtttcg ggcaaacgcg ctatacgaag gccaatacct gcttggtact tcgatcgcgc
      601 ggcccctgat cgccaaaaaa caaatcaaga ttgcggagaa ggtcggggca gatgcggttg
      661 cgcatggcgc cacgggcaaa ggcaatgatc aagtccgttt tgagctcacc tactacgcgc
      721 tcaagcccga tgtcacagtt attgctccat ggcgggaatg ggatctgacc tcgcgcagca
      781 agctcatcga gttcgccgaa aagcaccaaa ttccgatcgc caaggacaag cgcggggaag
      841 cgccattttc ggtcgacgcc aacctgttgc acacctcttc ggaaggcaaa gtgctggaag
      901 accccgcgca ggacgtgccc gattacgtct tctcacgcac ggtcgatccg gaaaaagcgc
      961 ccgacaaacc caccgttgtc acgctcgatt tcgagcgcgg ggatccagtt gccattgacg
     1021 gcaaaagact gtcgccggcg tcgctgctca aacagctcaa cgatctcggc cgcgccaacg
     1081 ggattggccg tctcgatctg gtcgaaaacc ggttcgtggg aatgaagtcg cggggcatgt
     1141 atgagacccc gggcggcacg atactgctgg ccggacgtcg cggcatcgaa tcaatcacgc
     1201 tcgatcgcgg cgctgcgcat ctgaaagacg agctgatgcc gaaatatgcc gagctggtct
     1261 attacggctt ttggttcacg cccgaacggg agatgctgca ggccgcgatc gacaagagcc
     1321 aggaattcgt ttcaggccgc gtaaggctta agctttacaa aggcaacgtc accgtgatcg
     1381 gcagggaaag caaatactcc ctgtacgatc aggaactggt gacgttcgag gaaggcgcag
     1441 tcgcctacga tcaccgcgat gccgagggct tcatcaaact gaacgcgttg cgcttgcgga
     1501 cgctcgggca acggcggcgg aagctgaagc tcgactgagc cgcttggacc tataaggaaa
     1561 ttgcgaatgg tccggtccat ggggaagctg ttcttgacat cagcgttcgc catgtcgctg
     1621 ctcgcctgct catcaggcag caaaaaggag ccggaggaaa atcccaatat tttcccatcg
     1681 gactacaaga acgaaattct gaacacgatg accagctcgc tcgacgatcc aaccaacgtc
     1741 cgcagcgcgt acatcagcga gcccgcactt cgacccgccg gcaaagaaga acgttatgtt
     1801 gtctgcgtgc gctcggattc ccgcgacgcc agcaagcggt acactggcgt aaaagatcgc
     1861 atcgcaatct tttacggcgg tcacatcaca caattaatag acgcaacccg ggaacagtgc
     1921 ggcaatgccg cctaccggcc gtttcccgag ctcgagaacc tgtgccaggc caagaaatgt
     1981 gtttagcttc gccggtcaaa atcaacgtgt gtcttcagcc ggaatcatcg gcacagtgtt
     2041 ggcgtcagcg acctttagct cgggaatgag ttgcacgttg cggcggcgtt tatctgcaat
     2101 ctccgcaacg actttctgca actgcacgaa gcgagccggc gtcaccgggt gtgttatgcc
     2161 ggcacgaatg ctgtcgggca tctccaggga ataagttcgc cagaattcct ccgccccagc
     2221 aagatcgtaa ccggcacgcg ccgcatagta ggcgcccaca taatcggcct cgcgctcaaa
     2281 atcgacgctg aacgccaatc gtcctgcacg accgagttct ctcgtaaaca aaccgccggt
     2341 ccatactgtt gccccgagca aaacctggtc gattatcatt ccgctggcct gtccaagaag
     2401 ctcattagca gcccgcttct cgagatgtcc gagggtgaca tgcgcgagct catgtcccac
     2461 gaccagggca agctgtgcat cgctgcgcgc aattcgcaa
//
LOCUS       DATDHO010000453         1584 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_169866, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000453 DATDHO010000000
VERSION     DATDHO010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169866"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..899)
                     /locus_tag="VIY07_08700"
     CDS             complement(<1..899)
                     /locus_tag="VIY07_08700"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF013206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY6381869.1"
                     /translation="MSRDFQLPGRSPVIACEGMAAASHPLATLAAVDALRAGGSAADA
                     AVAAVATLCVVEPHMTGIGGDCFCLVSQPDRPVWGYNGSGRAGANASEEPLWAKGLIE
                     IGTSIHAVTVPGAIDAWEAILKAHGRFGLDRALVPAIRYAREGFPVSARVAWDWQRHV
                     GKLKADPGAARHYLFGGGAPREGDVIRFPALADTLKRIATHGARAFYEGEIAEDMAKT
                     LGARGSFLTLEDFARHRGEVVTPISTNYRGLELVEIPPNAQGLTALVMLNILENFDIA
                     SLDPLGADRFHLVLEAARLGYAVR"
     gene            complement(920..1330)
                     /locus_tag="VIY07_08705"
     CDS             complement(920..1330)
                     /locus_tag="VIY07_08705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381870.1"
                     /translation="MLGLPLLLIPFAIYNIIAFLMPGVTWAGVVTTVHMVSGGDWTMS
                     AGELLVTLAIVLLCGEVIKSTRIGLRTVVDHALSLILFLAMLIEFILVKQAATATFFL
                     LLIVSFVDVLGGFAVTLRSAQRDLSVEGIERVSS"
BASE COUNT          342 a          500 c          471 g          271 t
ORIGIN      
        1 cgcacggcat agcccaggcg agcggcttcg agcacaagat ggaagcgatc ggcgccaagc
       61 ggatcaagcg aagcgatatc gaagttctca aggatgttca gcatcaccag cgcggtgagc
      121 ccttgcgcat ttggcgggat ctcgacgagc tccaacccgc ggtagttggt cgagatggga
      181 gtcaccacct cgccgcggtg gcgcgcgaaa tcttccagcg tgaggaacga accgcgcgca
      241 ccaagtgtct tcgccatgtc ctcggcgatc tcgccttcat agaaggcccg cgctccatgc
      301 gtcgctattc gcttcagcgt atctgcgagc gcgggaaagc ggatcacatc accttcacga
      361 ggcgcgccgc cgccgaacag ataatgtctg gcggccccgg gatccgcctt gagcttgccg
      421 acgtgcctct gccaatccca ggccacacgg gcggaaacgg gaaatccctc ccgggcatat
      481 ctgatcgccg gcacaagcgc gcgatcgagg ccgaaacggc cgtgtgcttt caggatagct
      541 tcccaggcat cgatggcccc cggtacggtg accgcgtgga tagaggtgcc gatctcgatc
      601 agtcccttgg cccacagcgg ctcctcggac gcgtttgctc ccgcccgacc ggagccgttg
      661 tacccccaga ccggcctgtc cggctgcgac acgagacaga aacaatcgcc gccgatgcca
      721 gtcatatgcg gctcaaccac gcacagagtc gcgacggccg ccacagccgc gtcggccgcg
      781 ctgccgcccg cacgcagcgc gtcgacagcc gcaagcgtgg caagcggatg tgacgctgcc
      841 gccatgcctt cgcaggcaat cacaggcgag cggccgggga gctggaaatc gcggctcatg
      901 gcaaagagga cttgggcgat caggatgaca cgcgctcgat accttcgacc gaaaggtctc
      961 gttgcgccga gcgtaaggtc accgcgaaac cgccgagcac atcgacgaag cttactatca
     1021 gcagcaggaa gaaggtcgcg gtggcggcct gcttgaccag tatgaattcg atcagcatgg
     1081 cgaggaacag gatcagcgac agggcatggt cgaccaccgt gcgcagaccg atgcgcgtcg
     1141 atttgatcac ttcgccgcac aacagcacga tagccaacgt aacgagcaac tctcccgccg
     1201 acatggtcca atcgccgccc gagaccatat ggacggttgt aacgacgccg gcccacgtca
     1261 cgccaggcat caggaaggcg atgatgttgt agatcgcgaa aggaatcagc agaaggggaa
     1321 ggccgagcat ggacttttac ccttcttttt ttcgatgatc tgctacttct tgaatctgtc
     1381 tccgccgacg atctgcggcc tcaacggcgt tagtagatgc gagctttcgc caatgccccg
     1441 ccaagctgag aaaggtgcgc cgaaaagctg ggggcatctc ttgggcacga ccctcacatt
     1501 ctctggcttt ggctatataa aactcggact ttgatctcat gatcacaggc caacacgcat
     1561 cggacaagta tagttcctgt caag
//
LOCUS       DATDHO010000454         2167 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_169882, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000454 DATDHO010000000
VERSION     DATDHO010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2167)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2167)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2167
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_169882"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..605)
                     /locus_tag="VIY07_08710"
                     /pseudo
     CDS             complement(6..605)
                     /locus_tag="VIY07_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase zinc-binding domain-containing
                     protein"
     gene            726..1061
                     /locus_tag="VIY07_08715"
     CDS             726..1061
                     /locus_tag="VIY07_08715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381871.1"
                     /translation="MIAIEFTPFIEPAVFDALEARVDAGARQFENMAEIRHALARRYP
                     LLPAHAIERRAVFGFVQVEGLRPHADPSAMRQTSAGLREDLAPVLTDIRVPALLVRGA
                     DSGFVSAAA"
     gene            complement(1226..1897)
                     /locus_tag="VIY07_08720"
     CDS             complement(1226..1897)
                     /locus_tag="VIY07_08720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEY6381872.1"
                     /translation="MEAIVQNFFNVEIMARVLPYLLTGLGVTLLLSMLVVPLGLTGGL
                     AVAVLYSLRLRWISVLVIAYVDFFRAFPPLVLLLFLYFGLPFFGVDIPAIVAVALGFL
                     LNTSAYYGEIFRAGIDSIARGQSEAARSTGLSWLQTMAYIIVPQATRNVLPDLVSNTM
                     EVVKLTTLASVVAIPELLDAARNAQALTYNPTPIVLAALMYLVMLWPVVRLISRLEHK
                     SVSLH"
     gene            complement(1899..>2167)
                     /locus_tag="VIY07_08725"
     CDS             complement(1899..>2167)
                     /locus_tag="VIY07_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6381873.1"
                     /translation="RQTLFYVILPQAVRLTIPPLTNRTIAITKGTALGSVVALPELLG
                     AAHSASSLAGNPTPLTVGALIYVALFIPLVLFGRWIETRYAWKR"
BASE COUNT          459 a          616 c          716 g          376 t
ORIGIN      
        1 atcgctcaca catgatgcgc gtgatgatct ttgcaagtgg ggactgcagc tcttcgatgg
       61 tggggccgcc acctcatgga agaccgccgt gctgtccgat agacgccgtc gagcaccagg
      121 cagtgcagat gtatattcaa attggcggct gagccgaagc gctggatcag cgtgaccgcg
      181 ccggtgttgg cggcggtccg tttcagtccc gcctgcttga ttagaaagct ggcaatgatc
      241 cggtggatca cctgcaatag cggcgcgagc agctgcggct gggcggcgaa cagaatgcgc
      301 agcggaattg gaaaagacag aacccattgg cgcaccggca ctggcgggat gatgtgatcg
      361 accaggtggg cggcggtctc cgccatgcgc cgcgcgccgc aagaagggca aaggccgcgc
      421 cgcttgcacg aaaaagcgac cagcttctca tgggcacact cggcgcagcg taggcgcaga
      481 aacccgtgcg cgaggatgcc gcaagcgaga aaggcatcga actcgtcttt gacaaactcc
      541 ggtaaggcga ccccgctctc ggcttcgacc tccgccaaaa aactctcgat gtgttcctgg
      601 accagagcga cattcggggg ctgatcgagt tcttcggcag cggcagggcg atgttgatcg
      661 gtcatgcact cggcgcccga aacgcgttgg aagccggggt gcggtttccg gatttggtct
      721 cggccgtgat cgccatcgag ttcacgccct tcatcgaacc ggcggtcttc gacgccctgg
      781 aagcgcgtgt ggatgccggc gcccggcaat ttgagaacat ggccgaaatc aggcatgccc
      841 tggcccgccg ctatcctttg ctcccggcgc acgcgatcga gcgacgagcc gtgttcggat
      901 tcgtgcaggt cgaaggcctt cggccgcacg ccgacccgtc ggccatgcgc cagacttccg
      961 ccgggttgcg cgaggacctg gcgccggtac tgacggacat tcgcgtgccc gcgctgctcg
     1021 tccgcggcgc cgacagcggc tttgtatcgg ccgctgcgtg agcgaagacc aggcagctgc
     1081 gaagtgatct ggcaactatc gagatcgaag gggcagacca gtacgtttcc gaggaggcgt
     1141 ttacaattct cgcacgggag attgtcaaat tctggggccg cacttgcgac agctgacgga
     1201 gagccgatca gggacaacgg atttatcagt gcaagctgac gctcttgtgc tcgaggcgcg
     1261 agatcaggcg caccaccggc cacaacatga ccaggtacat cagtgcggcc aatacgatcg
     1321 gagtcgggtt ataggtgagg gcctgtgcat tgcgggcggc atcgagcaat tccggaatgg
     1381 ctacgacgct cgcgagcgtg gtcaatttca ctacttccat tgtgttgctc acgagatcgg
     1441 gaagcacgtt tctcgtcgcc tgcggtacga tgatgtatgc catcgtttgc agccacgaca
     1501 gcccggtgga ccgcgcggcc tccgattggc cgcgcgcgat gctgtcgatt ccggcgcgga
     1561 agatttcgcc gtaataggct gatgtgttca ggaggaatcc aagtgccacg gcgacaatcg
     1621 cggggatatc gacgccaaaa aatggaagac cgaaatatag gaacaacaac agcacgagcg
     1681 gcggaaaggc acggaaaaaa tccacataag cgatgacgag caccgagatc cagcgcagcc
     1741 tgagactgta gagaacggcg actgcgagac cgcccgtgag cccgagcggc acgacgagca
     1801 tcgagagcaa aagcgtaacg ccaaggccag tcaggagata gggtagcacc cgggccatga
     1861 tctcgacgtt gaagaaattc tgaacgattg cctccatgct agcgcttcca agcgtatcgg
     1921 gtttcgatcc agcgcccgaa cagcacgagt gggatgaaca gggcgacata gatgagcgcg
     1981 ccgaccgtca gcggggtcgg gtttccggcg aggctcgatg cggaatgcgc agcgcccagg
     2041 agttccggca atgcgacgac cgatccgagt gcggtgccct tggtgatcgc gatggtgcgg
     2101 ttcgtgagcg gcggaatggt gaggcgcaca gcctgcggta gaatgacata gaagagcgtc
     2161 tgtcggg
//
LOCUS       DATDHO010000455         3111 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_170041, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000455 DATDHO010000000
VERSION     DATDHO010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3111)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3111)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3111
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170041"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..477
                     /locus_tag="VIY07_08730"
     CDS             <1..477
                     /locus_tag="VIY07_08730"
                     /inference="COORDINATES: protein motif:HMM:NF015316.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HEY6381874.1"
                     /translation="NWSRIGTISLSSPSGGPATIAGLPVTLPVQWKDGWFFSGGAEYQ
                     WTERLAVRAGGGYEISPVTDQVRIPLLADNDRIWASVGATWQVWKGFSFDLAYTHIWV
                     KEAPIDVSAASGNPWFRPAVPITYIGNADAHVDILSLALVYRWGAPEPAVRPIVTK"
     gene            complement(535..1314)
                     /locus_tag="VIY07_08735"
     CDS             complement(535..1314)
                     /locus_tag="VIY07_08735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010660047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6381875.1"
                     /translation="MNLGLAGRKAIVCASSRGLGKACARALAEAGCEVVINGRDAKKL
                     ESAAAELSSFAGVKVIPVAADVATPEGQKALLAACPQPDILVNNNGGPPMRDFRELTR
                     QQLIEGVIANMAVAIELIQKVIDPMCEKKFGRIVNITSSSVKMPLAGLDLSSGARAGL
                     TAFLAGVARTVADKNVTINNILPGAFDTDRLRGTLTKTAEVKGKSVNEVAADRMATIP
                     AKRFGNPDEFGAACAFLCSAHAGYITGQNLLIDGGTFSGAF"
     gene            1464..2138
                     /locus_tag="VIY07_08740"
     CDS             1464..2138
                     /locus_tag="VIY07_08740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY6381876.1"
                     /translation="MLRDPDSHVVQQAYARWAPLYDALCGPVFLNGRRAAATAARNVG
                     GRILEIGVGTGLSFEDYDATTEIVGIDISEPMIARARERLKSGRYPFVKDLAVMDAHE
                     LAYEDSSFDCVVGQFVITLVEDPERVLTECAHVVRPGGQIILVNHLYSERGLIAAVER
                     LLAQRARKLGLRPEFPFQRLAAWAQTHGGAELIERRKIRPFGAYTLVRFRRADERGAS
                     RALERV"
     gene            2223..3023
                     /locus_tag="VIY07_08745"
     CDS             2223..3023
                     /locus_tag="VIY07_08745"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEY6381877.1"
                     /translation="MTDNATRRFRALFISDVHLGTRGCQADKLLNFLRHHEAEAIYLV
                     GDIVDGWALRSSWYWPQSHNDVVQKILRQARKGARVIYIPGNHDEFLRGYYGTHFGGI
                     EVVESAVHDSLDGRRYLVVHGDIFDLVVTQARWLALLGDKAYEFALTANRIFNAFRRV
                     LGAPYWSLSKWAKLKVKNAVNYIGAFEKALAAEAKRHQADGVICGHIHTPAMHDDYGL
                     RYINCGDWVESCTAVGEGHDGRFEIITWTHTGRDVEPAVALPSPAKAA"
BASE COUNT          601 a          906 c          972 g          632 t
ORIGIN      
        1 aattggagcc gcataggcac cataagctta agctctccaa gcggagggcc agctacgatt
       61 gccggtttgc cggtcacgct tccagtccag tggaaagacg gatggttctt ctcgggcggg
      121 gcagaatatc agtggacaga acggctggcc gttcgtgctg gcggagggta cgaaatttcg
      181 cccgtcacag atcaggtccg tattccattg ttagcagaca atgacaggat ctgggcgtca
      241 gttggcgcga cttggcaggt ttggaagggc ttttccttcg atctcgccta tacgcacatc
      301 tgggtgaaag aagcgccaat cgacgtaagt gctgcatccg gcaatccgtg gttccgcccc
      361 gcggtgccca tcacgtacat cggcaatgct gacgcgcatg tcgacatcct ttcgctcgcg
      421 ctggtgtatc gctggggtgc accggagccg gcagtgagac caatcgtcac caagtaacct
      481 gcgggggcgg ggatggcggg gcgcaaggcc ggcagaaatg ccggcctttg cacatcagaa
      541 tgcgccgcta aatgtgccac cgtcgatcaa gaggttctgc ccggtgatgt aaccggcatg
      601 ggcggagcaa aggaatgcgc aggccgcacc gaattcatcc gggttgccga aacgcttggc
      661 tggaatcgtc gccatgcgat cggcggcgac ctcgttcacg cttttgccct ttacctcggc
      721 agtcttggtc aacgtgccgc gcagccggtc ggtatcgaag gcgccgggca agatattgtt
      781 gatggtgacg ttcttgtccg ccaccgtgcg tgcgaccccg gcgaggaatg cagtcaggcc
      841 cgcacgtgcg cctgatgaca gatccaggcc ggccagaggc atcttcaccg agctcgatgt
      901 gatgttcacg atccggccaa atttcttttc gcacatcgga tcgatcacct tttggatcaa
      961 ctcaatcgcg accgccatgt ttgcaatgac gccctctatg agttgctgcc gtgtgagctc
     1021 gcggaaatcg cgcatgggcg ggccgccatt gttgttgacc aggatgtcag gctgcggaca
     1081 ggcggcgagc agcgccttct gaccttcggg cgtcgcgacg tcggccgcaa ccgggatcac
     1141 cttcacgccc gcgaaacttg aaagctcggc cgcggcactt tccagtttct tggcgtcgcg
     1201 tccattgatg acgacttcgc acccggcttc cgccagggca cgcgcgcagg ctttgccaag
     1261 cccgcggctc gacgcgcaaa caatggcctt cctgccggca agtccgagat tcatgatttc
     1321 ttccttgttc gggcgaatat tcgagcccga cacagggcct caagaggacg cacaggtcaa
     1381 gccggaaaga ggcgagtgtc gccgttctgt agcaatcgat tgatatccgg tcgcccggga
     1441 cggtccattg attcggggga acgatgttgc gcgatcctga tagccacgtg gtgcaacaag
     1501 cctatgcgcg gtgggcaccg ctctatgacg cgttgtgcgg tcctgttttt ttgaacggtc
     1561 ggcgcgccgc tgccacggcc gcacgaaatg tcggcgggcg aatcctcgaa atcggcgtcg
     1621 gcaccgggct gtcgttcgag gactacgatg cgacgacaga gattgtcggc atcgacattt
     1681 ccgagccgat gatcgcgcgc gcccgggagc ggctcaaaag cggccgctat ccattcgtca
     1741 aggacttggc ggtgatggac gcgcacgaac tggcctacga agatagctcg ttcgattgcg
     1801 tggtcggcca attcgtgatc accctggttg aagatccgga acgcgtgctg acggaatgcg
     1861 cgcacgtggt tcggcccggc ggtcaaatca tcctggtcaa tcatctgtat tcggaacgcg
     1921 gcttgattgc cgctgtcgaa cgcctgctgg cgcagcgggc acgcaagctg ggccttcgcc
     1981 cggaattccc ctttcagcgg ctggcggcct gggcgcagac ccacggcggg gccgagctga
     2041 tcgagcggcg gaagatcagg cctttcggtg cctacacgct cgttcgtttt cggcgtgccg
     2101 atgagcgcgg tgcatcgcgg gcactcgaaa gggtgtgaaa taggtaaaca acgctgtcac
     2161 ataactgaaa caggtcattg gtacacgtcc cgcatgatca ttacgctgag gatcgtcggg
     2221 tcgtgacgga caacgccacg cgacggtttc gcgcgctttt catctccgac gtgcacctgg
     2281 gtacgcgcgg ctgtcaggct gacaagcttc tgaactttct gcgtcatcac gaagccgaag
     2341 caatttatct ggtcggcgac attgtcgatg gctgggcgct acgttcttcc tggtactggc
     2401 cgcagtcgca taacgacgtg gtgcaaaaga tattgcgcca ggcacgcaag ggtgcacgcg
     2461 ttatctacat tccagggaat cacgatgaat ttctgcgcgg ctattacggc acgcatttcg
     2521 gtggcatcga agtcgtggag agcgccgttc acgatagcct cgatggacgc cgctacctgg
     2581 tcgtccacgg cgacatattt gaccttgtcg tgacgcaagc gcgctggctc gcgcttcttg
     2641 gcgacaaagc ctatgaattc gcgctcacgg ctaaccggat tttcaacgcg ttccgccgcg
     2701 tgctaggcgc gccatattgg tcgctttcga aatgggccaa gctcaaggtc aagaacgcgg
     2761 tcaattatat cggtgcgttc gagaaagccc tcgcggccga ggcgaagcgc caccaggccg
     2821 atggcgtgat ctgcggccac attcacaccc cggcgatgca cgacgattat gggctgcgtt
     2881 acattaactg tggcgactgg gtggaaagct gcacggcggt gggcgagggg cacgacggcc
     2941 gcttcgaaat catcacctgg acgcatacgg gccgtgacgt cgagcccgcg gtagcgctgc
     3001 cgtcaccggc aaaagcggca tgagaacgcg catcggcaaa ttgcgatcat cgccacgcat
     3061 gcggggacca tccctttatt taaaggaact ggattccccg cgcgcgcggg a
//
LOCUS       DATDHO010000456         1899 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_21415, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000456 DATDHO010000000
VERSION     DATDHO010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1899
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_21415"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..497)
                     /locus_tag="VIY07_08750"
     CDS             complement(<1..497)
                     /locus_tag="VIY07_08750"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEY6381878.1"
                     /translation="MANKDKLVFMDEAIAACVGDNCSVAIEGFTGFICFAAGHEIIRQ
                     RRRNLTLIRMTPDLIYDQMIAAGTASKLIFSYMGNPGVGSLYCIRRAVEKAIPCPLEL
                     EEYSHYGLVGRYAAGAARLPFFALRSYLGSDMLTANPLIKLIDDPYGTGKIAVVPPLN
                     PDVAIL"
     gene            complement(502..1857)
                     /gene="pcaB"
                     /locus_tag="VIY07_08755"
     CDS             complement(502..1857)
                     /gene="pcaB"
                     /locus_tag="VIY07_08755"
                     /EC_number="5.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047472 - 3-carboxy-cis,cis-muconate
                     cycloisomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HEY6381879.1"
                     /translation="MPTALDSKIFGPLFSNSEINQLLSDQAYVRALVGVETALARAEA
                     RVGVIPQVAAEQISKAADPNKIDIASLSKGAVRSGFPIIALVRELQRLVGGQAASYVH
                     WGATTQDIMDTACVLQLRAATKLYKERLVELARQLSQLANRHRATVMAGRTHGQQALP
                     ISFGLKVASWLAPLLRHAERLDELSPRLLVVQFGGAAGTLAALGDKGLEVMQCLAAEL
                     KLAVPVMPWHAQRDSLVEFAGWLSLVTGSLGKMAQDIILLAQSEVGEVSESAEEGRGG
                     SSTMPQKSNPITSELILAAARNNASLLSALHHAQIQEHERATHGWQVEWLTLPEMIML
                     TGGALKHAVYLAKNLQVDETKMRENIHRANDVVLAEAAVFALAQAMPRAQADELVKRA
                     CAVALSEGKPLVEVVKNLVAGTLAAGAIDWQALAAPENYLGETDKVIDRALKSANDLR
                     G"
BASE COUNT          374 a          590 c          542 g          393 t
ORIGIN      
        1 agtatggcga catcgggatt gagcggcggc acgaccgcga tcttgccggt accgtacgga
       61 tcatcgatca gcttgatcag cggattggcc gtgagcatgt cggatcccaa atagcttcgc
      121 agagcaaaaa acggcaaccg agccgcgccc gctgcataac gcccgaccaa cccgtagtgg
      181 gaatactctt ccagctccag cgggcaagga atggcttttt ccacggcgcg ccggatacag
      241 tagagcgagc cgacgccggg attacccatg taactgaaaa tcaatttgct cgctgtaccg
      301 gcggcgatca tctgatcgta gatcaggtcc ggcgtcatgc ggatcaatgt aagattgcgg
      361 cgccgctggc ggataatttc gtggcctgcg gcaaagcaaa tgaacccggt gaagccctca
      421 atggccacgg aacagttgtc gcctacgcag gcggcgatgg cttcgtccat gaacacgagc
      481 ttgtctttgt ttgccaatct ctcaccctcg aagatcattc gcgcttttga gcgcccggtc
      541 tatgactttg tccgtctcac ccaaataatt ctcgggcgcc gccaacgcct gccaatcgat
      601 ggccccggcg gctagcgtcc cggcaaccaa atttttcacg acttcaacca acggctttcc
      661 ctcggacagc gcaactgcgc acgcccgctt gaccaattcg tccgcttgag cgcgcggcat
      721 cgcctgcgcc aatgcaaaca ccgcggcttc agcgagaacg acatcattgg cgcggtgaat
      781 attctcgcgc atcttggttt cgtccacctg caggttcttc gcaaggtaga cggcatgctt
      841 gagcgcgcct ccggtgagca tgatcatctc cggtaaggtc agccactcca cttgccagcc
      901 gtgagtcgcg cgttcgtgct cctgaatctg agcgtggtgc agggccgaca gcagcgacgc
      961 gttgttgcgc gccgctgcca gaatcaactc gctcgtgatg ggattgcttt tctgcggcat
     1021 cgtgctgctg ccgccccgcc cttcctccgc ggattccgag acttcgccga cctcgctctg
     1081 ggccagcaga atgatatctt gcgccatctt gccgagacta cccgtcacca ggctgagcca
     1141 tccggcaaat tcgaccaaac tgtcgcgctg cgcatgccac ggcatcaccg ggacagcgag
     1201 tttaagctca gcagcaaggc attgcatgac ctcgagtccc ttgtcaccaa gagcggccag
     1261 agtgcctgcc gcgccaccga actggacgac caaaagtcgc ggcgaaagtt catcgagcct
     1321 ctcagcgtga cgcagcagcg gcgcaagcca gctcgcaact ttcaacccga agcttatggg
     1381 cagcgcctgt tgcccgtggg ttcgcccagc catgaccgtg gctctgtgcc gattcgccag
     1441 ctggctgagc tggcgagcga gttcgacgag cctctctttg tatagtttgg tggcggcgcg
     1501 aagctggaga acacaggccg tgtccatgat gtcctgtgtc gtggcgcccc aatgcacata
     1561 agacgcggct tgcccgccga cgagccgttg cagttctcga actagcgcga tgattggaaa
     1621 tccggaccgg accgctccct tgctcaggga cgcgatatcg attttgtttg gatcggcagc
     1681 cttggagatc tgttccgcgg ctacttgcgg gatgacacca acacgggctt cagcgcgcgc
     1741 caacgcagtc tccactccga ccagcgcccg aacgtaagcc tggtcgctca gtagctggtt
     1801 gatttcggaa ttgctgaaca gcggtccaaa gattttggaa tcgagcgcgg tgggcatggt
     1861 tcgttactct tactggggtt gcgccaacgc tcttgagat
//
LOCUS       DATDHO010000457         2992 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_121140, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000457 DATDHO010000000
VERSION     DATDHO010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2992)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2992)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2992
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121140"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..813)
                     /locus_tag="VIY07_08760"
     CDS             complement(172..813)
                     /locus_tag="VIY07_08760"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY6381880.1"
                     /translation="MEIRLALVVALAYAPRIAYAADPAAPKADPARGQQIASQVCAAC
                     HGADGNSTAPINPKLAGQISDYLTKQLVNFKPSAAGKPAERPSSVMGAFATALSPDDV
                     RNVSAFYAGQTLKPEKARNKDTIELGRKIYRAGIADKAVPACAACHGATGAGIPAQFP
                     SLAGQYADYIEGQLKAFRSGERANDPNEMMRMTAARLSDVEIKAVADYIAGLR"
     gene            1163..1840
                     /gene="yihA"
                     /locus_tag="VIY07_08765"
     CDS             1163..1840
                     /gene="yihA"
                     /locus_tag="VIY07_08765"
                     /inference="COORDINATES: protein motif:HMM:TIGR03598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HEY6381881.1"
                     /translation="MSLFQNATYVASAHRLQDLPPAGEPEIAFAGRSNAGKSSAINAL
                     ANRARLAFVSKTPGRTQQINFFRLARGGLLVDLPGYGYAKVPRQIREHWEGTLSRYLQ
                     TRTSLCGLALIMDARRPFTERDELMLDWFVPTHRPIHVLLTKADKLSSGRAVATLRSV
                     RSRLGKYGGHCSAQLFSSLRRTGIEEAEAVLARWLEAAGRSSALADDGHKKAPGQRGK
                     PGAKRLK"
     gene            2000..>2992
                     /gene="hemB"
                     /locus_tag="VIY07_08770"
     CDS             2000..>2992
                     /gene="hemB"
                     /locus_tag="VIY07_08770"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEY6381882.1"
                     /translation="MKVYGSYPSVRLRRMRHDEFSRRMICEHALTAADLIYPVFIVEG
                     TNTEQPVPSMPGVARLSLDRLLHVAEEALELRIPTIALFPVVEPRLKTADGKEATNPD
                     GLIPRVVTALKKQFPELGVMTDVALDPYTSHGQDGVIDDSGYILNDETIAILQRQALT
                     QARAGVDIVAPSDMMDGRIGAIRAALDGERFIHTRIMAYSAKYASAFYGPFRDAVGSA
                     SALGKGNKYTYQMDPANSDEALREVGLDLQEGADMVMVKPGMPYLDIVRRVKDEFKAP
                     TFVYQVSGEYSMLKAAFQNGWLDEARCVAEALLAFKRAGADGILTYFARDVARSL"
BASE COUNT          583 a          854 c          913 g          642 t
ORIGIN      
        1 aagaaaattc tttgatcgca ttcatctatt ccattgctcg tcgtcgcagc cgccatgcca
       61 tttttagaac agagggtaat cttcccttat tcccgttcgc cagctgtagg ttgcacatag
      121 cgtgaaaaaa gaagggcggc ctcttgccgc cctgcgcgga cgttcaaacg cctatctgag
      181 cccagcgatg taatcggcaa cggctttgat ctcaacatcg gatagtcgcg ccgcggtcat
      241 tctcatcatt tcgttgggat cgttcgcgcg ctcgccgcta cggaaagcct tgagctgccc
      301 ttcgatatag tccgcatatt gcccagccaa gctgggaaac tgcgccggga ttccagcgcc
      361 ggtggcgcca tggcaggccg cacaagcggg gacggcttta tccgcgatcc cagcgcgata
      421 gatcttgcgc ccgagttcaa tcgtgtcctt gttccgcgcc ttctccggtt tcaacgtctg
      481 gccggcataa aaggccgata cattgcgcac atcgtccggc gaaagcgcgg tagcaaatgc
      541 ccccatgaca ctgcttggac gctcggccgg tttgccggca gcggatggtt tgaagttcac
      601 cagctgtttg gtgaggtagt ccgaaatttg ccctgcgagc tttgggttga ttggcgctgt
      661 gctgttcccg tcggcgccat gacaggcggc gcaaacttga ctcgcgatct gctgccccct
      721 ggcgggatcg gcttttggcg ctgcggggtc cgcggcgtag gctattcggg gcgcgtatgc
      781 gagcgctacg acgagcgcca ggcgaatttc catgactccc ctttttcgag ttccgatcgg
      841 cgtccgagcg aatagccgca aaaaaggctg gtattgtacc gtcgtttcct ggtcttgcgg
      901 tcggatgccc ttgtttcaac tagcggattc actgtgggat cagcggctta accgtttttc
      961 ctgcaaccat actgccgctg ccaggctgcg tcgtcgttcc atgcggcggc accggcaagg
     1021 acagtcgggc gtcgctgatt ccctgttctt catgcgggtt ccgccgtgca acttaattgc
     1081 aatactggct gtttatgcag ttgtacttaa ttgcacgcgg caaattaacc tgttgattaa
     1141 taaatagcat ttcattagtc ttgtgtcctt gttccagaac gcaacctacg tcgcttcggc
     1201 gcatcgcctc caggaccttc cgccggccgg ggaaccggag attgcctttg ctgggcgctc
     1261 gaacgctgga aagtcgagcg cgattaacgc gctcgccaat cgggcgcggc tggcattcgt
     1321 tagcaagacc ccgggacgca cgcagcaaat caatttcttt cggctggcgc ggggcggcct
     1381 gctagtggat ctgcctggct atggttatgc gaaagttccc cggcagatac gcgagcactg
     1441 ggagggaacg ttaagccggt atctgcaaac gcgcaccagc ctgtgcggcc tcgcgctcat
     1501 catggatgcc cgccgtcctt tcactgaacg agacgagctg atgcttgatt ggttcgtgcc
     1561 cacgcaccgg ccgattcacg tcttattgac caaagccgac aagctctcca gcggccgggc
     1621 ggttgcgacg ctgaggagcg tgcggagtcg gctcggcaaa tacggaggtc attgttctgc
     1681 ccaacttttc tccagcttgc ggcggaccgg tatcgaggag gcggaagccg tgctggcacg
     1741 ctggttggaa gccgcgggcc gatcgagcgc cctggccgac gacgggcata aaaaagcccc
     1801 gggccaaagg ggaaagcctg gggctaaacg ccttaaatga gattaaggca cccgctcagg
     1861 gaggagaagc gggagacgat cgaaaccgtc tggctataag agtctcgatt gccaaaaaaa
     1921 gtttcgcggg atgcaatgat ccagcgcacg ttgaagtcag atcattgata gaaaagagaa
     1981 ttttcttctg gagtcggcga tgaaggtcta tggcagctac ccgtcggtgc ggttgcgtcg
     2041 catgcggcac gacgaattct cgcgtcgaat gatttgtgag cacgcgctca cggcggccga
     2101 cttgatctat ccagtcttta ttgttgaagg cacgaacacc gagcagccgg tcccgtccat
     2161 gccaggtgtc gcccggcttt cgctcgatcg gctgctgcat gtggcggagg aagcactcga
     2221 actccgcatc ccgacgattg cgctgttccc ggtcgtcgaa ccccgcctta agaccgccga
     2281 cggcaaggaa gccaccaacc cggatgggct gatcccgcgg gtcgtgaccg cgctgaagaa
     2341 gcagtttccg gagctcggtg tgatgaccga cgtagcccta gacccttaca cgagtcacgg
     2401 ccaggacggc gtgatcgacg acagcggcta tatcctgaac gacgaaacga tcgctatcct
     2461 gcaaaggcag gcactcacgc aagcgagggc gggtgtcgat atcgtcgccc cgtcagacat
     2521 gatggacggt cgcattgggg cgatccgcgc ggcattggac ggggagcggt ttattcatac
     2581 gcgaatcatg gcctactcgg cgaagtacgc gtccgcgttc tatgggccgt ttcgcgatgc
     2641 cgtgggctcg gcgtccgcgc ttggcaaggg caacaagtac acctaccaga tggatccggc
     2701 gaactcggac gaggcgctgc gcgaagtggg gctagacctg caggagggcg cggacatggt
     2761 catggtcaag ccaggcatgc cgtacctgga tatcgttcga cgggtaaagg acgaattcaa
     2821 ggcgccaacg tttgtctacc aagtgagcgg tgagtattcg atgctcaaag ccgcgtttca
     2881 gaatggttgg ctagacgaag cgaggtgcgt cgccgaggcg ctgcttgcct tcaagcgcgc
     2941 cggtgctgac ggcattctta cttacttcgc gcgcgacgtc gcgcgttcgt tg
//
LOCUS       DATDHO010000458         1585 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_464116, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000458 DATDHO010000000
VERSION     DATDHO010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1585)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1585)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1585
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464116"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..482)
                     /gene="fdxA"
                     /locus_tag="VIY07_08775"
     CDS             complement(147..482)
                     /gene="fdxA"
                     /locus_tag="VIY07_08775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HEY6381883.1"
                     /translation="MTYVVVENCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCG
                     VCEPECPVEAIKPDTEEGAEKWLNLNADYSKIWPNITIKRDPPVDAKEWEGKADKLQY
                     FSPNPGQGD"
     gene            complement(609..887)
                     /locus_tag="VIY07_08780"
     CDS             complement(609..887)
                     /locus_tag="VIY07_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HEY6381884.1"
                     /translation="MSIASKEQERQRIDKWLWHARMVRTRTAAAALTAAGFVRLNGKR
                     TTAASHPVRIGDVVTLALDRTVRVVRVEGFCERRGGPPAARALYRDLT"
     gene            complement(884..>1585)
                     /locus_tag="VIY07_08785"
     CDS             complement(884..>1585)
                     /locus_tag="VIY07_08785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381885.1"
                     /translation="PDTEPAVGTVLVNDASSQTLLPQPELAAAEAAPPLVQEPVPLAT
                     EEPAAPAEAAGIAPPADGVPAENKPAEEPAFIEVWRPAGRFERRPHRPRRQHRPQQAQ
                     VPGPEPGVAATASQEGAAASTAPESTQPSRGPRRPRSERSERPDREKRHERHERQQRM
                     ERQDERAERQERGPRRERPRRDRGERVDRAEREQYYAKPFGSSSSNKQPDPNSPFAKL
                     AALKQQLEQSTKDPS"
BASE COUNT          249 a          511 c          480 g          345 t
ORIGIN      
        1 gaatagcgat cctctttgct gcactgcatg agtccgcttt tgacccttag cggacatccc
       61 tagttgcgcc gcacatgtcc gctttcgggg gtaaagcgga catcgaccaa ccgcgtgccc
      121 atggtgcata gacgatctgt cgggcactag tcgccttggc ccggatttgg cgagaagtat
      181 tggagcttat ccgccttacc ttcccattct ttcgcgtcta caggagggtc gcgtttgatc
      241 gttatattgg gccagatttt tgagtaatca gcgttgagat tgagccactt ctcggcccct
      301 tcctcggtgt caggcttaat cgcttcgacc ggacattccg gctcgcatac gccacagtcg
      361 atgcattcat ccggatggat cacgagcatg ttttcgccct cgtagaagca gtccacggga
      421 cacacctcca cgcaatccat gtatttgcat ttaatacagt tttctacgac gacgtaggtc
      481 attcgtcact ccggccgggc ctcgcaaaaa tccgtaactc aaccgtagat aagccgcaac
      541 cgccgggcct accagttcca ggcctacacc attgctgctg ccagacagaa ggcccggttg
      601 gcggaatttc aggtcaaatc gcggtaaagc gcgcgagcag caggcgggcc gccccgcctt
      661 tcgcaaaagc cctccacccg cacaaccctt acggtccgat cgagcgcgag agtgacgacg
      721 tcgccgatgc ggaccggatg gctggccgcc gttgtgcgct tgccgttcaa cctgacaaaa
      781 ccggccgccg tcagcgcagc cgcggcggtt ctcgtccgta ccatgcgcgc atgccaaagc
      841 catttgtcga tacgttggcg ctcctgctcc ttgctcgcga tgctcaagac gggtctttgg
      901 tgctctgctc cagctgctgc ttgagtgcag caagctttgc aaacggtgaa ttgggatccg
      961 gctgcttgtt tgaagaactg ctgccgaatg gcttggcata gtactgctcg cgttcggccc
     1021 gatccacgcg ctcgccgcgg tcgcggcgtg gccgttcgcg gcgcggaccg cgctcctgcc
     1081 gctcggcgcg ttcatcctgg cgttccatgc gctgctggcg ctcgtgacgc tcgtgtcgtt
     1141 tttcgcgatc cggacgttcg ctgcgctcgc tgcgcgggcg acgggggccg cgtgacggct
     1201 gtgtgctttc cggcgccgtg gatgccgctg ccccttcctg cgacgcggtc gccgcaacgc
     1261 ctggctccgg tcccgggact tgcgcttgct gcggccggtg ctggcggcgc ggccgatgcg
     1321 gtcgccgctc gaaccggccg gcgggccgcc acacctcgat gaaagcgggt tcctccgcag
     1381 gcttattctc ggcgggcacg ccatctgcgg ggggcgcaat acctgcagct tccgctggcg
     1441 ctgccggctc ttctgtcgcg agaggcaccg gctcctgcac caacggtggt gcggcttcgg
     1501 cggcggccaa ttcaggttga ggtaacagcg tttgcgacga ggcatcgttg accagaacgg
     1561 ttccaactgc gggctctgta tctgg
//
LOCUS       DATDHO010000459         3714 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_67889, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000459 DATDHO010000000
VERSION     DATDHO010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3714
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_67889"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1182
                     /gene="murJ"
                     /locus_tag="VIY07_08790"
     CDS             <1..1182
                     /gene="murJ"
                     /locus_tag="VIY07_08790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEY6381886.1"
                     /translation="QRFALAVELTRITFPYLLLVTLVTLYGGILNALQRFAAAAAAPI
                     FLNLSLIVALLLAAFFPTAGHAAAWGVLAAGILEFLLVAGDASLVGVLARFRWPDLDA
                     DVRRFFRALGPAIIGSAGVQLALFADTIIASFLPTGALSALYYADRINQLPIGVIGIA
                     AGTVILPEMSRLIAAGDHHRAAQSQTRAIEFTLLLSIPCVVAFFVIPELIMRALFMRG
                     AFTAADAEAAGRTLTAYAFGLLPFVLIRSAVATFFARGDTATPVKAALIAAAVNIAFK
                     VLLMGPLAQVGLALATSIGAWINLGLVIWFAKRAGHVSRDARLQRSIIRLAIAGVVLT
                     AAIWLCHAPVVRWLATWGGPRDLAALAILAAIGAAVYGATLLILFGTKWLAAFRGKTR
                     P"
     gene            1279..2490
                     /locus_tag="VIY07_08795"
     CDS             1279..2490
                     /locus_tag="VIY07_08795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018386966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY6381887.1"
                     /translation="MNFINRASSFSVIYGARKFAALLAIATLVASCSEQQQQAGAPPP
                     PAVTVAKPVKRTVVDYDEYVGRFTAINAVEIRARVAGYLDKVHFKDGQIVKQGDLLFT
                     IDKRPFQNSLDQARANLVQAQSNLAFTESDYTRGQQLVRDKTITEQTFEQRSQAFRNA
                     KASVASAEAAVRQAELDLEFTDLRAPIEGRIGDRRVSPGNLVTGGTGGNTTLLATIVS
                     TDPIYFEFTFDEASYLRYQRLATTGKDVASRNAGVQVAIKLIDENDFDHEGRMDFVDN
                     VIDRSTGTIRGRAVFANPKEVFTPGMFARVRVPGTPPYEGLLVPDVAIGTEQARRFVM
                     VIDDQDTARPKYVTLGQVTKDGLRVVKDGIGPDDRIVISGLMQARPGQKVRPEEPKPS
                     PAPGGSPQASK"
     gene            2506..>3714
                     /locus_tag="VIY07_08800"
     CDS             2506..>3714
                     /locus_tag="VIY07_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6381888.1"
                     /translation="MRISHFFIDRPIFASVVSIVFVILGGVAFFRLPIAQYPEIAPPT
                     ITVTGQYPGASADVVAATVVTPIEQQINGVENMIYIASNSTGDGRFTINVTFDIGTNL
                     DIAQVQVQNRVAIAQPRLPVDVRNIGVKVDKSSPDLMMVVHLYSPDKSRDTLFISNYA
                     TIEITDTITRIDGVGSLIVFGSRDYAMRAWLDPDRLQSVGLTANDVVLALQGQNVQVA
                     SGVLNQPPVDKPGAFQISVQTLGRLTSTEEFSNIVIKQTATAVVRMKDIATVELAAQD
                     YSTNSYLDRDPAIAIGIFQRPGSNALSTATNIKRTMDELAKRFPPGLKYDIIYNPTEF
                     IQQSVDAVEETIAEAIILVVLVVILFLQTWRAAIIPIVAIPVSLIGTFFFMAMFGFTL
                     NNLSLFGLVLA"
BASE COUNT          677 a         1164 c         1095 g          778 t
ORIGIN      
        1 cagcgctttg cattggccgt cgaactcacc cgcattactt ttccgtatct gctgctggtc
       61 acgctggtga cgctctacgg cggcatcctt aacgcgctgc agcgcttcgc tgccgcggcc
      121 gctgcaccaa tttttctcaa cctttcgctc atcgtcgccc tcctgctggc agccttcttc
      181 cctactgccg gccatgcggc ggcatgggga gtgctcgccg caggcatact cgaattcctg
      241 ctggtggcgg gggacgcaag ccttgtcggc gtgctggccc gatttcgctg gccggatctc
      301 gatgcggacg tccggcggtt tttccgcgcg ctcggtccgg caatcatcgg ctctgccggc
      361 gtgcaactcg ctttgttcgc cgatacgatc atcgcgagct tcctgccgac gggcgcgctg
      421 tcggcgcttt actacgccga tcggatcaac cagctgccga tcggggtcat cggcattgcg
      481 gcgggcaccg tcatccttcc cgagatgtcg cgcctcattg cggccggtga tcaccatcgc
      541 gccgcccaat cccagactcg ggcgatcgag ttcacgctct tgctgtcgat tccgtgcgtc
      601 gttgcgtttt ttgtcattcc cgagctgatc atgcgcgcct tgttcatgcg cggcgcattc
      661 actgcggccg atgccgaggc tgccgggcgc acgctgacgg cctatgcttt cggactgctg
      721 cccttcgttc tgattcgcag cgcggtggcg acgttctttg cgcgcggcga tacggccacg
      781 ccggtgaaag cggcgttgat cgccgcggcc gtcaacattg cattcaaggt gctgctgatg
      841 ggtccgcttg cgcaagtcgg gttggcgctg gcgacttcga ttggcgcctg gatcaatctt
      901 ggcctggtga tctggtttgc gaaacgcgcc ggtcatgtgt cgcgcgatgc gcgccttcag
      961 cgatcgatca ttcggcttgc catcgcggga gtggtactca cggcggcaat ctggttgtgt
     1021 cacgcgccgg tcgtccgttg gctcgcaact tggggcggac cgcgtgatct cgccgcactg
     1081 gccattctgg cggcgatcgg cgcggccgtt tacggcgcaa cactgttaat tctgttcgga
     1141 accaaatggc tggccgcttt ccgcggcaaa acgcggcctt aacgacagaa gccgctattg
     1201 cctaatgcgg caagtggaca tagctcacgg cgaacgctat ggggacgtgc cgcctagcca
     1261 catccgctgc aggcattcat gaatttcatc aatcgagcat catcattttc tgtgatatat
     1321 ggcgcgcgaa aattcgcggc gctgttggcc attgcgactt tggtcgcaag ctgcagcgag
     1381 caacagcaac aggcaggtgc gccgccgccg ccagcggtca ccgttgcaaa gccggtcaag
     1441 cgcacggtcg tcgactatga cgaatatgtc ggccgcttca ccgcgatcaa tgcggtcgaa
     1501 atacgggcga gggttgccgg ctaccttgac aaggtgcact tcaaggacgg gcagatcgtc
     1561 aagcagggcg acctgttgtt cacgatagac aagcggccgt tccagaattc gctggaccag
     1621 gcgcgcgcaa accttgtgca ggcgcaatcc aatcttgcct tcaccgaatc cgactacacg
     1681 cgcggccaac aactggtccg cgacaagacg atcaccgagc agacattcga gcagcgctcg
     1741 caagctttcc gcaatgccaa ggcttcggtt gccagcgcag aggccgccgt gcgtcaggcc
     1801 gagcttgatc tcgaattcac cgacttgcgt gcgccgatcg agggacggat cggggaccgg
     1861 cgcgtatcgc caggcaacct ggtcaccgga ggaacgggcg gcaacaccac cttgctcgcg
     1921 acgatcgtgt caaccgaccc gatctacttc gaattcacgt tcgacgaagc ttcgtacctt
     1981 cgttaccagc ggttggccac gaccggcaag gatgtcgcga gccggaatgc cggcgtgcag
     2041 gtcgccatca agctgattga cgagaacgat ttcgaccacg aaggtcgcat ggacttcgtt
     2101 gacaacgtga tcgaccgctc gacgggcacg atccgcggcc gtgcagtatt tgcgaatccg
     2161 aaagaagtct tcacccccgg gatgttcgcg cgcgtgcgcg tgcccggcac gccgccttat
     2221 gaaggcttgc tggtgccgga cgtcgccatc ggcaccgaac aggcgcgtcg cttcgtgatg
     2281 gtcatcgacg accaagacac ggcgcgtccg aaatacgtga cgctcggaca ggtcacgaag
     2341 gacggcctgc gcgtcgtcaa ggatggcatc gggccggatg accgcatcgt tatcagcggt
     2401 ctgatgcagg cgcgacccgg gcagaaagtg cggcccgagg aacccaagcc cagtccggca
     2461 cccggcggct caccacaagc gtccaaataa cgcgcgttat cattcatgcg tatttcacat
     2521 ttcttcattg atcggccgat cttcgcttcg gtggtgtcga tcgtgtttgt gatcctcggt
     2581 ggcgtcgcgt tcttccggct gccgattgcg caatatccgg agatcgcgcc gcccaccatc
     2641 acggtcaccg gccagtatcc cggcgccagc gccgacgtcg tggctgccac cgtggtcacg
     2701 ccgatcgagc agcagatcaa cggcgtcgaa aacatgatct acatcgcgtc gaattcgacc
     2761 ggtgacggcc gtttcacgat caacgtgacc ttcgacatcg gcaccaacct cgatatcgcg
     2821 caggtgcagg tgcaaaatcg tgtcgctatc gcgcagccac gcctgccggt tgacgtccgc
     2881 aatatcggcg tgaaggtgga caagagttcg cccgacctga tgatggtcgt gcatctctac
     2941 tcgccggaca aatctcgcga tacgctgttc atctccaact acgccaccat tgagatcacc
     3001 gacaccatca cccgcatcga tggggtcggt tcgctgattg tgttcggcag ccgcgactat
     3061 gcgatgcgcg cctggctcga ccccgatcga ttgcagtcgg taggcctcac tgcaaacgac
     3121 gttgtgctcg ccttgcaggg ccagaacgtg caggtcgcgt ccggagtgct caatcagccg
     3181 ccggttgaca agcccggtgc gttccagatt tcggtgcaga ccctgggacg cctgacgagt
     3241 accgaggagt tcagcaacat cgtcatcaag cagacggcaa ctgccgtggt acggatgaaa
     3301 gatatcgcga ccgtcgagct tgcggctcag gactattcga ccaattccta tctcgatcga
     3361 gatccggcga tcgcaatcgg catcttccag cggccgggat cgaatgcatt gtccacggcc
     3421 acgaacatca aaaggaccat ggatgagctg gccaagcgtt ttccgccggg cctgaaatac
     3481 gacatcatct acaacccgac cgaattcatt cagcagtcgg tggacgcggt tgaagagacc
     3541 atcgccgaag cgattattct cgtcgttttg gtggtcattc tctttctgca gacctggcgc
     3601 gcagcgatca ttcccatcgt agccataccc gtgtcgctaa tcggcacctt cttcttcatg
     3661 gcgatgttcg gctttacgct gaacaatctt tcgctctttg gactcgttct ggcg
//
LOCUS       DATDHO010000460         1771 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_121253, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000460 DATDHO010000000
VERSION     DATDHO010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1771
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_121253"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..558
                     /locus_tag="VIY07_08805"
     CDS             7..558
                     /locus_tag="VIY07_08805"
                     /inference="COORDINATES: protein motif:HMM:NF015415.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HEY6381889.1"
                     /translation="MRNMGTVGGNLAGGDPLTDPGASLIALDAEVTLSSSKGQRRLRL
                     DEFFLDYYQTALEPGELLTEIHVPPPQRPGWSHIKFTPRSIEDFATVGVAITLQAKNG
                     TCEDVRLGLNSVAPTIVRAKRAEEVLRGKSIDDSTLRKMGEVAATECDPTDDNRGSAE
                     YKREMVKVLVRRAAQEALQRLLK"
     gene            complement(577..>1771)
                     /locus_tag="VIY07_08810"
     CDS             complement(577..>1771)
                     /locus_tag="VIY07_08810"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEY6381890.1"
                     /translation="QEAAILGTSLYTSPALAALANGTLGHALDFDDVTFHLRGHPSAP
                     VVPAVLALGQTLGASGEDVITAFVIGVEVEAKIGKAMTAAHLRHGWHPTAVIGTLGAV
                     AAAAKLLKLTAPQVQMALGIAASKAAGLRQNFGTMTKPLHAGEAARNGVEAAQLAQRG
                     FTADPHILDGRFSFFNVFVGEGEFVPETVVQDFGAPYEIITPGIGVKPYPACRAAHRA
                     IDAMLHLVRMYHLQPNDVSEIICNTSARMRDFLVHHQPQTGLAGKFSMEYCLAAALLH
                     GKLGLAQFSDASVQDPRAQALMQRVRLTHPDQDKVNWDRPVPDVVEVVLHSGARRHQR
                     IEVPKGDPDQPLTWAELVAKFQDCAATVLPDGQIEKATQHIAHLEELPTLKPLMASLT
                     LQERA"
BASE COUNT          374 a          547 c          511 g          339 t
ORIGIN      
        1 ccgcgcatcc gcaacatggg cacggtcggc ggcaatcttg ccggcggcga tccgttgacc
       61 gatcccggcg caagtttaat cgcgctcgac gccgaagtga ctctctccag cagcaaaggg
      121 cagcgaaggc tgcgcctgga cgaatttttc ctcgactatt atcaaaccgc tctagaaccg
      181 ggtgaattgc taacggaaat tcatgtcccg ccaccgcaaa gaccgggctg gtcccatatc
      241 aaattcacgc cgcgcagcat cgaagacttc gcgacggtcg gagtcgcgat tacattacaa
      301 gccaaaaacg gtacctgtga ggatgtccgg ctaggcctta actccgtcgc gccaaccatc
      361 gtgcgcgcca aaagagccga agaagtcctg cgcgggaaat caatcgacga ttccactctc
      421 cgaaaaatgg gcgaagttgc cgctacggaa tgcgatccca cggatgacaa ccgcggctcc
      481 gctgaataca agcgcgaaat ggtaaaggtt ctcgtccgcc gcgccgctca agaagcgctt
      541 cagaggctgc ttaaatgaca tgctaaaaac agcttgctac gcgcgctcct gcaaagtgag
      601 gctcgccatg agcggcttca gggtcggtag ttcttccaga tgcgcgatat gctgcgtagc
      661 tttctcgatc tgcccgtccg gtaaaaccgt cgcagcgcag tcctggaact tggccacgag
      721 ttcggcccat gtcagcggtt ggtctggatc gcccttggga acctcaatgc gctggtgccg
      781 ccgcgcgcca ctgtgcaaca cgacctccac gacatctgga acaggtctat cccagttgac
      841 tttgtcctga tctggatgcg tcagccgtac acgctgcatc aacgcctggg cgcggggatc
      901 ttgcacgctg gcatccgaga attgcgccag gcccaacttg ccgtgcaaga gcgccgcagc
      961 caggcagtac tccatgctaa acttccccgc caaacccgtt tgcggctggt ggtggacgag
     1021 aaaatcgcgc atgcgcgcgc tggtgttgca aataatctca ctgacgtcgt tgggctgcag
     1081 gtggtacata cgcaccaggt ggagcatagc atcaatggcg cggtgtgcgg cgcgacaggc
     1141 agggtagggt ttcacaccga ttcccggcgt gatgatctca tacggcgcac caaagtcctg
     1201 tacaacggtc tcagggacga actccccttc gcctacgaag acgttgaaga agctaaaacg
     1261 accgtcgagg atatgcggat cggccgtgaa tccccgctgc gctagttgcg ccgcttccac
     1321 tccattgcgc gccgcctcgc cagcatgcag tggctttgtc atggtgccga agttttgccg
     1381 taacccggcg gctttcgagg ctgcgatacc aagcgccatc tgcacctgtg gagcggtcaa
     1441 cttcaggagt tttgccgccg cggccactgc gcctagggtg ccaatcacag ccgtcggatg
     1501 ccagccgtga cgcagatgcg cggcagtcat agccttgccg attttcgctt caacctccac
     1561 cccgattaca aacgccgtga tgacgtcctc gccactcgca cccagggttt gcccgagcgc
     1621 tagcaccgct gggactacag gcgcgctggg atgtccacgc agatgaaagg tcacgtcgtc
     1681 aaagtccaag gcatgcccga gcgtgccatt cgccaaggcc gcaagggcgg gcgatgtgta
     1741 aagggatgtg cccaggatgg cggcttcctg a
//
LOCUS       DATDHO010000461         5921 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_418003, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000461 DATDHO010000000
VERSION     DATDHO010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5921)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5921)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5921
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418003"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VIY07_08815"
     CDS             complement(<1..459)
                     /locus_tag="VIY07_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEY6381891.1"
                     /translation="MTIRPRRSVLYMPGSNARALEKAKTLPADGVIFDLEDSVAPEVK
                     MAARQQVIDAVKAGGFGAREIFIRVNGVDTPWHADDIAAAAHAAPDAILIPKVSSADT
                     LELIGRRLLDMAADHRTRVWAMIETPLAIFNILPIAQAASDSEARLSGFVM"
     gene            525..1265
                     /locus_tag="VIY07_08820"
     CDS             525..1265
                     /locus_tag="VIY07_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006937954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF429 domain-containing protein"
                     /protein_id="HEY6381892.1"
                     /translation="MSEAATDFWLAGVDGCPGGWIAAFVRPTGNDCVVAVYPNFADVL
                     AAPQAAAIVAVDIPIGLPERAGHGGRAAENAVRPLLGQRQSSVFSVPSRNAIYASDYG
                     AACTAALATSEPPRKVSRQLYNIAPKIREVDAILRVDPKVATQVFEVHPELAFWRLNG
                     ERPLAKAKKIRNRPYEPGLILRRELLALAGLPSALTHAPPKGAAADDLIDALACAAMA
                     RRIHAGQAQRFPDPPPLDRHGLPMAIWA"
     gene            1304..1975
                     /locus_tag="VIY07_08825"
     CDS             1304..1975
                     /locus_tag="VIY07_08825"
                     /EC_number="4.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004089 - carbonate dehydratase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEY6381893.1"
                     /translation="MPFPQQLIDGYRAFLIGRLRHEQDRYRSLAESGQSPQIMVIGCC
                     DSRVSPEVIFDARPGELFVVRNVANIVPPYAPDERAHGVSAALEFGVGALKVRHIVVL
                     GHAQCGGVKAFAEDAEPLSPGDFIGNWMKLMTPAAERVGPRGELSPADYLRRLEQANI
                     INSLDNLMTFPRLRSLIERGEVMIHGAYFGVATGKLSVRDPATGKFTQVASDDYARMF
                     VQPRF"
     gene            complement(1989..3023)
                     /locus_tag="VIY07_08830"
     CDS             complement(1989..3023)
                     /locus_tag="VIY07_08830"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEY6381894.1"
                     /translation="MGYKVAVVGATGNVGREMLDVLAERNFPADEVVAVASRRSQGVE
                     CSFGDKTLKVKAIDHFDFSDVDICLMSAGGAVSKEWSPKIAAQGAVVIDNSSAWRMDP
                     DVPLIVPEVNADAVSGFTRKNIIANPNCSTAQLVVALKPLHDKARIKRVVVATYQSVS
                     GAGKEAMDELFSQSKAVFTLDEIEAKKFSKRIAFNVIPQVDVFMEDGYTKEEWKMVVE
                     TKKILDPKIKLTATCVRVPVFVGHSEAVNIEFEQPLTADEAREILRSAPGCLVIDKRE
                     DGGYVTPYECVGEDATYISRIREDVTIENGLQIWIVSDNLRKGAALNAVQIAECLVNR
                     KLIQAKRRAA"
     gene            3267..3446
                     /locus_tag="VIY07_08835"
     CDS             3267..3446
                     /locus_tag="VIY07_08835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381895.1"
                     /translation="MRSLPCIPGSEPKLGALFAQAELNRSYGGQRDPILAATPKYHLL
                     WKALDKKLEFRRSDR"
     gene            complement(3454..3804)
                     /locus_tag="VIY07_08840"
     CDS             complement(3454..3804)
                     /locus_tag="VIY07_08840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381896.1"
                     /translation="MWRFRSLFLVAGLLISAAGIAEAQKFTPRDESPEEFPAGPGREE
                     TFYSCTACHGFKLVAAQGMNRRQWEETLAVMTAKHGMPNLEGKDRELVLNYLETTYPP
                     RAPAGGWQNPFLKR"
     gene            complement(3825..5183)
                     /locus_tag="VIY07_08845"
     CDS             complement(3825..5183)
                     /locus_tag="VIY07_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite oxidase"
                     /protein_id="HEY6381897.1"
                     /translation="MTGHKERTIEELYRDDPERADALVFGRETGPSRRGFLGGAGLAT
                     MCAAVGGTIPYSDDMPAGLIPVAMAQSAAPPPASAPAATKAPQFLKFPGKNEKLVLLG
                     EKPLVAETPESLLDDATTPIDKFYIRNNGQIPEETKDADRWKITIDGEVNQKLELTVG
                     ELKAKFKPVTRRMVLECGGNGRSFFTPQARGNQWTNGGAGCAEWTGVRVADVLKAAGV
                     KPSAIFSGHYGADPHLSGDASKPALSRGVPIKKLMDENNLIVWAMNGQPLPNIHGFPV
                     RLVIAGWPGSVSAKWLNRIWVRDKYHDGPGMGQTSYRVAIKPMIPGDKPDESNFRDLE
                     SMPVRSIITNPANGAKLPAGTKAVQLRGAAWAGDHTVKQVDVSTDFGATWAKAKLENP
                     KNKYDWQRWTATVKLPSDGYFEIWTRGTDSRGVMQPHVAGFWNPQGYGGNPMHRIAVL
                     VG"
     gene            5590..>5921
                     /locus_tag="VIY07_08850"
     CDS             5590..>5921
                     /locus_tag="VIY07_08850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381898.1"
                     /translation="MRIKAVGAAFVLIGALALPAGPSDAQTNQTKRQTVVYNRDRTIQ
                     ISRDEDGRTRTRIIIQRRSFLDPGTESLPGDNVRNTGYIENPNQRAGSVINNTSAGLL
                     NTQSALPGP"
BASE COUNT         1118 a         1835 c         1732 g         1236 t
ORIGIN      
        1 catcacgaaa ccggaaagcc gggcttcgga atcgctagcc gcctgggcga tcgggaggat
       61 gttgaaaatg gcgagcggcg tctcgatcat cgcccagacc cgagtcctgt ggtcagccgc
      121 catgtcgagc agccgccggc cgatcagttc cagcgtgtcg gcgctcgaga cctttggtat
      181 caaaattgcg tcgggggcgg cgtgagccgc ggcggcaata tcgtcggcat gccagggcgt
      241 atcgacgcca ttgacgcgga taaagatttc gcgtgcaccg aagccgccgg ctttcaccgc
      301 atcgatcacc tgctgtcgcg cggccatctt gacttcgggc gccaccgagt cctcaagatc
      361 gaagattacc ccgtcggcgg gcagtgtctt cgccttttcg agcgcgcggg cgttggagcc
      421 cggcatgtaa aggacactgc ggcgcgggcg aattgtcatc cggtgtggcc tcccttccca
      481 tgcccagcct acctttggag caatgcacgt gccactgttg gcgtatgagt gaggctgcaa
      541 cagatttctg gttggcgggc gtcgatggat gtccgggcgg ctggattgcg gctttcgtcc
      601 ggccgacagg taatgactgc gtcgtcgccg tttatccgaa ctttgccgat gtgctcgctg
      661 cgccacaagc cgcggcgatc gtcgcggtcg acattccgat cggcctgccc gaacgagcgg
      721 gccacggcgg ccgcgcagca gagaatgccg taagaccttt gcttggacag cgtcaatcgt
      781 cggtattttc ggttccttcg cgaaacgcga tctatgcgtc ggattacggc gccgcatgca
      841 ccgccgcgct cgccacctcg gaaccgccgc gcaaagtatc aaggcaattg tacaacatcg
      901 cgccgaagat ccgggaggtc gatgcaatcc tgcgggtcga tccaaaggtc gcgacgcaag
      961 ttttcgaggt ccatccggaa ttggcgttct ggcgcctgaa cggcgagcga ccgcttgcaa
     1021 aggcgaaaaa aattagaaat cggccctacg agcctggcct cattttgcgg cgggaactgc
     1081 tggctttggc cggcctgccg tccgcgctga cccacgcacc gccgaagggc gcggccgccg
     1141 acgatctgat cgacgcgctc gcctgcgctg ccatggcccg gcgcattcat gccggacagg
     1201 cgcagcgttt tcccgatcca ccgccgctcg accgccacgg attgccaatg gcaatctggg
     1261 catgattgtg tgaacccttg tgttttcttc gcagcggcgt gccatgccat ttcctcagca
     1321 attgatcgac ggataccgcg cctttctcat tggccggctg cgtcacgaac aagatcggta
     1381 tcggagcctg gccgaaagcg gtcagtcgcc gcagatcatg gtgatcggct gctgcgactc
     1441 gcgggtgtcc cctgaagtca tttttgatgc gcgtccgggc gaattgttcg tcgttcgcaa
     1501 tgtggcgaac attgtgccgc cgtatgcccc ggacgagcgt gcccacggcg tttcggccgc
     1561 gctcgagttt ggcgttggcg ccctcaaagt caggcacatc gtcgtgctcg ggcacgcgca
     1621 atgcgggggt gtcaaggctt tcgccgaaga tgccgagccg ctgtcgcccg gcgacttcat
     1681 cggaaactgg atgaagctga tgacccccgc agcagaaaga gtggggccgc gcggtgaatt
     1741 gtcgcccgca gactatctaa gacggctcga acaggcgaac atcatcaaca gccttgataa
     1801 cctgatgacc tttccgcgcc tgcgcagcct gatcgaacgc ggcgaggtca tgatccatgg
     1861 cgcgtacttc ggcgtcgcaa ccggcaagct ttcggtgcgt gacccggcga ctgggaaatt
     1921 cacccaggtc gccagtgacg attatgcccg gatgttcgta cagccccgct tctgactaag
     1981 cggtccgtct acgccgcccg gcgcttggcc tgtatcagct tgcgattcac caggcactcg
     2041 gcgatctgca ccgcgttgag tgcggcgcct ttgcgcaggt tgtccgatac gatccatatc
     2101 tgcaggccgt tttcgatcgt tacatcttct cgaatacggc tgatataggt tgcatcctcg
     2161 ccgacgcatt catagggagt gacgtagccg ccgtcctcgc gcttgtcgat cacaaggcag
     2221 cccggggcgc tgcgcaaaat ctcgcgtgct tcgtcagccg tgagcggctg ctcaaactcg
     2281 atattgacgg cttccgaatg gccgacgaat accggcacac gaacgcaggt cgcggtgagc
     2341 ttgatcttgg gatcgagaat cttctttgtc tcgaccacca tcttccattc ttccttggtg
     2401 tatccgtctt ccatgaaaac atcgacctgc ggaatcacgt tgaatgcgat ccgcttggaa
     2461 aatttcttcg cctctatttc atcaagcgta aataccgcct tgctctgaga gaacagctcg
     2521 tccatcgctt ccttgccggc accggaaaca gattgatatg tcgcgaccac gacccgcttg
     2581 atcctcgcct tgtcgtgcag cggcttgagc gcaaccacga gctgcgcggt cgagcagtta
     2641 ggattggcga tgatgttttt cctggtgaag ccggagactg cgtcggcgtt cacctcgggc
     2701 acgatcaacg gcacgtccgg gtccatgcgc caggccgagg agttgtcgat aacgacggca
     2761 ccttgcgcgg cgatcttcgg cgaccattcc tttgacaccg caccgcccgc cgacatgaga
     2821 cagatgtcga cgtccgagaa atcgaaatgg tcgattgcct tgaccttgag cgtcttgtcg
     2881 ccgaatgagc attcaacgcc ctggctccgc cgcgatgcca cggcgacaac ctcatcggcg
     2941 gggaaattgc gttcggccag aacgtcgagc atctcacgcc cgacattgcc ggtagcgccc
     3001 accacagcga ccttgtaacc catcgttaac gctccgcatt aattacagtt cagcggccgg
     3061 ccaagcgcaa ccggatggca gcgcttctag gcgagaacag cgttcaacac aacggtgtcc
     3121 gcaggcaaaa ccctggatgc acccggccct gcagtcatgg cgcgatgaac tgtcctcccg
     3181 ccttgtgcgc gttctcgcat atctgggtgg tgccgcggtg ctttccactg tggtctcgca
     3241 tctttttcaa tcgccgaaag tgatgggtgc gatcactccc gtgcatcccg ggcagcgagc
     3301 ccaagctggg cgccttgttc gcccaggctg agctcaatcg cagctatggt ggccaacgcg
     3361 atccgatcct ggccgccacg cccaaatatc atctgctctg gaaggcgctc gacaaaaagc
     3421 tggagttccg ccgctccgac cgctaagcgg cggtcagcgt ttgaggaatg gattctgcca
     3481 accgcctgcc ggcgcgcgtg gcggatacgt cgtctcgaga tagttcagca ccagttcacg
     3541 gtctttgcct tccagattgg gcatgccgtg ctttgcagtc ataaccgcga gcgtctcttc
     3601 ccattgccgg cgattcatgc cttgcgcggc aaccagcttg aagccatgac aagctgtaca
     3661 ggaatagaac gtttcctcgc gtcctggccc cgcgggaaat tcttccgggc tttcatcccg
     3721 cggggtgaac ttttgcgctt cagcgatgcc agccgccgag atgagaagtc cggccacgag
     3781 aaacaaagac ctgaatcgcc acatggatag acgtgctggc gaactcaccc aaccaggacc
     3841 gcaatgcggt gcatcggatt gccgccgtag ccttgcggat tccagaagcc ggccacatgc
     3901 ggctgcatga cgccgcggga atcagtgccc cgcgtccaga tctcgaaata gccgtcggaa
     3961 ggcaatttca cggtcgctgt ccagcgctgc caatcgtatt tgttcttcgg attttcaagc
     4021 ttggccttgg cccaggtcgc gccgaagtcg gtggaaacgt ccacctgctt cactgtgtgg
     4081 tcgccggccc aggcggcccc ccgtaattgc acagccttgg ttcctgccgg caattttgca
     4141 ccattcgccg ggtttgtgat gatcgatcgg accggcatcg attcaagatc gcggaaattg
     4201 ctttcatcgg gcttgtcgcc cgggatcatt ggcttgatgg cgacgcgata cgatgtttgt
     4261 cccatgccgg gaccgtcgtg atatttgtcg cgcacccaaa tgcggttgag ccacttcgcc
     4321 gataccgagc ccggccagcc ggcgatcaca agacgcaccg ggaagccgtg gatgttcggc
     4381 aatggctgcc cgttcatggc ccagacgatc aggttgttct catccatcaa ctttttgatc
     4441 ggcacgccgc gggagagcgc cggcttgctg gcatcgcctg acaggtgcgg gtcggcgccg
     4501 tagtgaccgc taaagatagc ggagggcttt acccccgccg ccttgagaac atcggccacg
     4561 cgtacgccgg tccattccgc gcaacccgca ccgccattgg tccattggtt gccgcgcgcc
     4621 tgcggggtaa agaaggagcg cccgttgccg ccgcattcca gcaccatgcg ccgcgtcacc
     4681 ggcttgaact tcgccttcag ctcgccaacc gtcagctcaa gcttttggtt gacctcgccg
     4741 tcgatggtga tcttccacct atcggcgtct ttggtctcct ccggaatctg accattgttg
     4801 cgaatataaa atttgtcgat cggcgtggtc gcatcgtcga gcaggctttc aggcgtctcc
     4861 gccacgagcg gcttctcgcc gagtaaaacc agcttctcat tctttcccgg aaatttgagg
     4921 aattggggtg ccttggttgc ggctggagcg gaggcgggag gcggcgcggc actttgcgcc
     4981 atggcaaccg gaatcaatcc ggccggcatg tcatccgaat atggaattgt gccgccgacg
     5041 gccgcgcaca tcgttgcaag tcccgctcca ccaagaaatc cacggcgact tggccccgtc
     5101 tctcgtccga aaacgagagc atcggctcgt tcgggatcat cgcggtaaag ctcctcgata
     5161 gtacgctcct tgtgcccggt cattaggcgt ctccctcaac atggcgtttc gctagacaat
     5221 tgttctgtcc tgaggccctc gcataggacc aatgtttctt ttgaggctag cgcccgctcc
     5281 agaaaaggtc gagggtattt ggcgacgtcc gccaacgcgc ggactgcatc gggattctta
     5341 cttttccgaa tcgtcgcgat tggccttgct cacaaggagg aatctcaggt cacgcctagc
     5401 cccgacgacg cgtcgcctag ggaaatttgt tggcgccctg aaccggaatc aggatagctg
     5461 gtgtaaatgg ctggttgtcc ggcgtgccaa tcgcctgttt acgaaaaaat atcgagtatt
     5521 tggtctgttg catgaaacgg aacccggcta cactgcgttg caatactagg caaaaggatc
     5581 gaggatccca tgcggattaa agctgtcggc gcggcgttcg ttctgatcgg agccttggct
     5641 ttgccggctg ggccgtcgga tgcccagacc aaccagacca aaaggcaaac ggtggtctac
     5701 aaccgcgatc gcaccattca gatcagccgc gacgaagacg gtcgcacgcg cacccgcatc
     5761 atcattcaga ggcgctcgtt cctcgatccc gggaccgaga gtttgccggg cgacaacgta
     5821 cgaaacaccg gctacatcga aaatccaaac cagcgcgccg gaagcgtgat caacaatacg
     5881 tcggcgggcc tcctcaacac gcaatcggcc ctcccagggc c
//
LOCUS       DATDHO010000462         4399 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_464283, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000462 DATDHO010000000
VERSION     DATDHO010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4399)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4399)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4399
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464283"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VIY07_08855"
     CDS             complement(<1..214)
                     /locus_tag="VIY07_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6381899.1"
                     /translation="MSTTLIEIRRAKSSDASDVAETHDEAWRGAYQGIIPGNELDKLI
                     NRRGPDWWDSAIRKGSRITVLQFGDRI"
     gene            complement(454..2277)
                     /gene="typA"
                     /locus_tag="VIY07_08860"
     CDS             complement(454..2277)
                     /gene="typA"
                     /locus_tag="VIY07_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEY6381900.1"
                     /translation="MDLRNVAIIAHVDHGKTTLVDRLLQQSGAFRENQRVVERAMDSN
                     DLERERGITILAKATSVIWENTRINIVDTPGHADFGGEVERILNMVDGALVLVDAAEG
                     PLPQTKFVVSKALKMGLKPIVIINKVDRADARATQVVNEVFDLFAALDATEEQLDFPI
                     LYGSAKEGWMSQALEGPKESMEPLFDLVLRHVKPPQVEDGPFRMLGTILEANPYLGRI
                     VTGRITSGTVRPNQTVKVLDRDGNLVESGRVTKLLAFRGLERTGVEEAEAGDIVAIAG
                     LPNATVSNTICAPEVEVPLPAQPIDPPTLAMIFRVNDSPLAGTEGDKVTGRMIRDRLL
                     REAEGNVALRVRESDEKDSMEVAGRGELQLGILIETMRREGFELSVSRPKVLLKEDPA
                     SEMLEPIEEVVIDLDDEHSGIVVQKMAERKADMMEMKPSGGGRLRLVFHAPTRGLIGY
                     QGELLTDTRGTAIMNRLFHAYAPYKGPIQGRRNGVLISNDEGEAVAYALWNLEDRGPM
                     MIEPGWKVYKGMIVGEHTRGNDLVVNILKGKKLTNIRTTSKDEAVRLTPPIRMTLEKA
                     LAYIQDDELVEVTPKAIRLRKRLLDENDRKKEERKKEAETV"
     gene            complement(2347..3975)
                     /locus_tag="VIY07_08865"
     CDS             complement(2347..3975)
                     /locus_tag="VIY07_08865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HEY6381901.1"
                     /translation="MAIRIRPAVTRRHLLATGAAATAFTTIGGIARPFISRANDRPLI
                     THGIQSGDVSVDSGVIWARADRPSRMLVEIATTDSFKDARNAAFVDALPETDFTAKLL
                     LENLPPAQEIFYRVRFQDLASPTIVGEAQVGRFRTAPNDRRSISFVWSGDTAGQGWGI
                     DESRGGMRTYATMLKSRPDFFIHSGDNIYADGPIAAEQKMPNGEVWRNIVSEHKSKAA
                     ETLQEFRGNYKYNLLDKNLRAFNAEVPIFTQWDDHEVTNNWWPGEPLTRAEHQRRKYT
                     EKNATLLSAWAARAFHEYMPLRWTQAEPGRVYRKISYGPLLDVFMLDMRSYRGPNGEG
                     KEDTYGPAAYFLGPTQVAWLKQELANSRATWKVIAADMPIGLLVVYDGDRKWGVEAVA
                     QGDGGPPRGRELEIADLVSFIKRAGVRNTVWITADVHYTAAHYYDPNKAAFQDFDPFW
                     EFVSGPIHAGTFGPNSLDNTFGPQLVYVRAPTKEQGLNLPPSEGMQFFGHVAIDGTSQ
                     QMTVTLKDVDDRPLWAKTLDTETRLRARLQISNS"
     gene            complement(4121..>4399)
                     /locus_tag="VIY07_08870"
     CDS             complement(4121..>4399)
                     /locus_tag="VIY07_08870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HEY6381902.1"
                     /translation="PFWEFVSGPIHAGTWTPCALDRTFGPSVVFQSAASREQGDNLAP
                     CFGLQFFGHMAIDGVTATLTVRLKDVADRVLWSTSIEPKFDQTAHRRS"
BASE COUNT          856 a         1309 c         1289 g          945 t
ORIGIN      
        1 caatgcgatc gccgaattgg aggacagtaa tgcgactgcc cttgcggatc gcagagtccc
       61 accagtccgg accgcgacgg ttgatcaact tgtcgagctc gttgcccgga atgattccct
      121 gatacgcccc gcgccacgcc tcgtcatgcg tctccgccac gtccgatgcg tcggacgact
      181 tcgcacggcg aatctctata agggtggtgc tcattgcgcg aatagaagca atgaactttg
      241 cggccttcaa gccctatcgt taatgatggg ttaacggtgt ggattactgg tcacaggcgc
      301 gaaaacgcca gcagtgatgc atgaaaatcg cattcgtgac tccgctggca gataaaatcc
      361 ggccagttcc gcgctcagca caggggtcgg agagttaatt tcggacgatc actgattcga
      421 atccgattcg aatcacgcca aaacttgtga ccgttacacc gtttcggctt ccttcttgcg
      481 ctcttccttt ttgcgatcgt tctcgtccag aagcctcttg cgcagccgga ttgcctttgg
      541 cgtcacctcg accagttcgt cgtcctggat gtaggcgagg gctttctcca gcgtcattct
      601 aatgggcggg gttagccgca ctgcctcgtc tttggaggtc gtccgaatat tggtgagctt
      661 tttgcccttc agaatattga cgaccagatc gtttccgcgc gtgtgttcgc ccacgatcat
      721 gcctttgtaa accttccagc ctggctcgat catcatgggt ccgcggtctt cgagattcca
      781 cagggcgtag gcgaccgcct caccctcgtc gttagagata aggacgccat tgcgccggcc
      841 ctggatcgga cccttgtacg gcgcataggc gtggaacaac cgattcatga tggcggtgcc
      901 gcgggtatcg gtgagcaatt cgccctggta cccgatcaga ccacgcgtcg gcgcatgaaa
      961 gacgagccga agccggccgc cgccggacgg cttcatttcc atcatgtcgg ctttgcgctc
     1021 ggccatcttc tgaacgacga tgccggaatg ctcgtcatcg agatcgatga cgacttcttc
     1081 aatcggctca agcatttcgc tggcggggtc ttccttcagg agtaccttcg gccgcgacac
     1141 cgacaattcg aacccttcgc gacgcatggt ttcgatcagg atgccgagct gcagttcgcc
     1201 gcgcccggcc acttccatgg aatccttctc gtctgattcg cgcacgcgca gtgccacatt
     1261 cccttcggcc tcgcgcagca ggcggtcgcg aatcatgcgc cctgtgacct tgtcgccttc
     1321 cgtgccggca agcggggaat cgttgacgcg aaaaatcatc gccaaagtcg gtggatcgat
     1381 cggttgagcg gggaggggga cctccacctc gggcgcacag atagtattgg acaccgttgc
     1441 attgggcagg ccggcaatgg cgacgatatc gcccgcctcg gcttcctcga cacccgtgcg
     1501 ctcaagtccg cggaaagcga ggagcttggt cacgcgcccg ctttcgacca gattgccgtc
     1561 acgatcgagc accttcacag tctggtttgg cctgacggtg ccggatgtaa tgcgtcctgt
     1621 gacaatgcga ccgagataag ggttggcctc aagaattgtg cccagcatgc gaaacggccc
     1681 atcttcgacc tgagggggtt tcacgtgcct gaggacgaga tcgaagagtg gctccatcga
     1741 ctctttcggt ccttccaagg cctgcgacat ccagccttcc ttcgccgagc cgtatagaat
     1801 cggaaaatcg agctgctcct cggtggcatc aagcgcggcg aacagatcga acacctcgtt
     1861 gaccacctgg gttgcgcgtg cgtctgcccg gtcgaccttg ttgatgatca caatcggctt
     1921 gagccccatc ttgagcgcct ttgagaccac gaacttggtc tgcgggagcg ggccctcggc
     1981 ggcgtcgacc aacaccagcg caccgtcgac catgttgagg atgcgttcaa cctcgccgcc
     2041 gaaatcggcg tgaccgggcg tatcgacgat gttgatgcgc gtgttttccc aaatcaccga
     2101 agtcgctttg gcgaggatcg taataccgcg ctcgcgctcg aggtcgttcg aatccatggc
     2161 gcgttcgacg acgcgctggt tctcccgaaa cgcgccggat tgctgcagaa ggcggtcgac
     2221 cagggtggtt ttgccgtggt cgacatgcgc gatgatcgcg acgttgcgaa gatccatagc
     2281 ggttcccgaa aggagcgtgc ccgactcggg gagccgggca cgcgaactcg ttgcggcgca
     2341 atatagtcag gaattcgata tctgcaatcg ggcccttaac cgagtttcgg tatcaagcgt
     2401 cttcgcccat aacgggcgat cgtcgacgtc cttcagcgtg acggtcatct gctggctcgt
     2461 gccatcaatg gcaacatgcc caaagaattg catgccctcg ctgggcggca ggttcaggcc
     2521 ttgctctttg gtcggtgccc ttacgtagac cagctgcgga ccgaaggtgt tgtcgagcga
     2581 attggggccg aacgtgccgg catgaatcgg gcctgaaacg aattcccaaa acgggtcgaa
     2641 atcctgaaat gccgccttgt tcgggtcgta ataatgggcc gcggtatagt gcacatccgc
     2701 cgtaatccag acagtgttgc gcacgccggc ccgtttgatg aacgagacca ggtcggcaat
     2761 ttcgagttcg cgcccgcgcg gcgggccacc gtcgccttgc gcgacggctt caacccccca
     2821 tttgcggtcg ccgtcataaa ccaccagaag gccgatcggc atatcggcgg caatgacctt
     2881 ccaggtcgcg cgcgagttcg ccaactcctg ctttagccag gccacttgtg ttggaccgag
     2941 gaaataggca gcggggccgt aggtatcttc cttgccttca ccgttgggcc cgcgatagct
     3001 gcgcatgtcg agcataaaga catcgagcag gggaccgtag gaaatcttgc gatagacacg
     3061 acccggctca gcctgcgtcc agcgcagcgg catgtattca tggaatgcac gcgccgccca
     3121 cgccgaaagc agcgttgcgt tcttttccgt atatttcctg cgctggtgct ccgcccgagt
     3181 cagcggttcg ccgggccacc agttgttggt gacctcatgg tcatcccact gggtgaaaat
     3241 gggcacttcg gcattgaacg cgcgcaaatt tttgtcgagc aaattgtatt tgtagttgcc
     3301 acggaactcc tgaagcgtct ccgccgcctt tgatttgtgt tccgatacga tgttccgcca
     3361 cacttcgccg ttcggcatct tctgctctgc cgcgattgga ccgtcggcat aaatgttgtc
     3421 gccgctgtgg atgaaaaagt cgggcctgct cttcagcatg gtggcatagg ttcgcatgcc
     3481 gccgcgcgat tcatcgatgc cccaaccttg tcccgcagta tcgcccgacc agacgaaact
     3541 gatcgagcgc cgatcgttgg gcgcggtacg aaagcggccc acttgtgctt cgccgactat
     3601 ggtcggtgag gcgaggtcct gaaaacgcac gcggtagaag atttcctgcg cggggggcag
     3661 attctcgagc agaagcttgg cggtgaaatc ggtttccggc agcgcgtcga caaaagcggc
     3721 attgcgcgcg tccttgaaac tgtcggtggt cgcaatttca accagcatcc gcgagggtcg
     3781 atcggcacga gcccagatca ctccggaatc gacggaaaca tcgccggatt gaattccatg
     3841 cgtgatcaag ggccgatcgt tggcgcgact tatgaatggg cgggcaatgc cgccaattgt
     3901 cgtgaaagct gttgccgccg ctcccgttgc cagaaggtgc cggcgtgtca cagccgggcg
     3961 aatccgtatc gccatctaaa cctccccttc ctcaggttga gctccggagc ttggtcgcgg
     4021 tccctgacaa atcgtagacg cctgcatgac ggaaaggtga cagcagcctg tttcctgtga
     4081 cttacctcgg aacagaaacc aaggcgtcgc tcgattgcag tcatgaacgg cgatgcgcgg
     4141 tctggtcaaa tttcggctcg atggaagtcg accatagcac gcgatcggcg acatccttaa
     4201 gtctcacggt caaagtcgcc gtcacgccgt cgattgccat gtgtccaaaa aactgcagac
     4261 cgaaacaagg tgcgaggttg tccccttgtt cgcggctcgc ggcgctctga aacacgactg
     4321 atgggccgaa cgtgcggtcg agcgcacacg gagtccatgt tcccgcgtgg atcggaccgg
     4381 aaacgaattc ccaaaaagg
//
LOCUS       DATDHO010000463         1509 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_269970, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000463 DATDHO010000000
VERSION     DATDHO010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_269970"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(288..1348)
                     /locus_tag="VIY07_08875"
                     /pseudo
     CDS             complement(288..1348)
                     /locus_tag="VIY07_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611495.1"
                     /note="programmed frameshift; incomplete; partial in the
                     middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          289 a          495 c          437 g          288 t
ORIGIN      
        1 gagccacggc ggtcatcgct ctaaactagg agacttggta ggatcgacca tcccagaggt
       61 gggaaatgat cgtaaggatc gtagtaccct ctgaggtcga gaaaaaaatg cttgggtgtg
      121 acctgcccaa attcttcgga ccacggctag cttgagacgg ggtccctcgc ttggtgcatg
      181 tgctcctgac ggagcgggtt ttgcaacggg gcagggcgcg gaggcccaca taccgcagcg
      241 ccctggcccg ttgcacgacg ggacgctgcg tttgcctgtc gagccgcgaa ctcgttcggc
      301 gtgaaatagt cgaggctcga atgcggacgc acctcgttgt agtgcctccg ccatgcttcg
      361 atgatcacct tcgcctcagc acgcgaacga aaccattcga gggtcagaca ttcatcacgg
      421 aattttccgt tgaagctttc cgcgacgcca ttctgccagg gcttgccggg ctcgatcaac
      481 gcggtgccga tgccctgcgc gacgatccag gacaacagcg ctttggacac gaactccggg
      541 ccgttgtcgc tgcgcaggaa cgtcggcgcg ccacgagcgc tgaccagacg cgacagcacc
      601 tcgatcacgc gcggcgagcg gatgcggccg tcgacgtcga tcgcaagccc ttccttggtg
      661 aactcatcgg tcaccgtcag gcacttgagc tgctgaccgt tggcgcagcg atcgaacacg
      721 aagtcgtagg accacacctg gttcggtccg cacggcgggt gcggccgtgg ccgcgcggcc
      781 gccacccgct tcctcggccg cttacgcggc agctgcaagc ccgctgcccg ccacaggcga
      841 tatgttcggc ccgggctcat gcggtggccg tcgcggccga gaaagatccg gatacggcgg
      901 tagccgtagc gcggatactg ccccgacagc tccttcatgc gcttgatcac gggtgcttcc
      961 ttcgccgctt tgcggctccg gtagctcaac gccgatcgtg ccaccgagaa cagcgtgcag
     1021 gcccgtcgaa ccgagagccc gcgctctcgg ccatatgcaa tttgacgccg acgagccggc
     1081 acgctcacca gttttttgcc gcgacttcct tcatgacctc aatctcgaga tcacgctcaa
     1141 cgaccagctt cttcagccgt gcattctcca cctcgagctg cttcagccga cgcacgtcgc
     1201 tcgcttgaaa ccctccaaag cgtttgcgcc aagtgtagat cgtctgctcg ctgatcccgt
     1261 gccgcttggc aaccgccgac accggttcgc gatccgcctc gcggatgatc gcgaccatct
     1321 gctcttctgt gaaacgcgct ttgcgcattg ctccctccga atcgggagcc agtctctcaa
     1381 cttatcgctg gtccgaaaat cctgaagcag gtcaagacga tggccagcga cgacaagaaa
     1441 atcaaaacta accccgctcc caaaaatgag gtcccttcga aggagggtac ttcaggtgta
     1501 gacacatcc
//
LOCUS       DATDHO010000464         6316 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_170444, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000464 DATDHO010000000
VERSION     DATDHO010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6316)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6316)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6316
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_170444"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..500)
                     /locus_tag="VIY07_08880"
     CDS             complement(<1..500)
                     /locus_tag="VIY07_08880"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY6381903.1"
                     /translation="MRPMLVLIAVLTLAQPLSAQDLRLFSIGSGDLDGGYFAAARAIC
                     EVINRADGKRLRCSPESTPGSLYNLVALEKGQLDLAIVQSDWQKHAFKGTSLFASRGP
                     MTRLRSVMSLYPEPFNLIARKKAGIESFRDLVGKRVDIGQPASGRQATMRAVMESFGI
                     KLADFQ"
     gene            949..2298
                     /locus_tag="VIY07_08885"
     CDS             949..2298
                     /locus_tag="VIY07_08885"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381904.1"
                     /translation="MAEKVVPVSRLLDERGLSAFQIKLLIWSFFIVLIDGYDIAAIAF
                     AAPSLVKEWGLKPGALGPVFSASLVGILFGSALFGWIGDRYGRKAALVWSNLLFGVFT
                     LAAAYATNLDQMFWLRLLAGLGIGGVIPNIVAINAESAPRKLRATLAIIAVGCVPIGG
                     AIPGFVTAALVPQYGWQILFLIGGIVPIVIAIAAQIGMPESIKYMTLHESQRGKMERL
                     ITAISPGYPLSPNAKFVIEDEQQFPGFNPKYLFGQGLAVITPLLWLLFALNLMGYFFL
                     LSWTPTLMTAAKLPPTTVALAGASLQVGGTVGALLLCWWLQRHRFLAIAIMFAIAVPV
                     VGSIGFAGLTSQAALLTATFFAGFLVLGIQSGINVVGALIYPTSLRANGSGWQLGLGR
                     IGSIVGPLVGALFVGMPVQQLYMWSALPFVAGAVICFAIHRLNTARLAAHPELVQAQ"
     gene            complement(2343..3431)
                     /locus_tag="VIY07_08890"
     CDS             complement(2343..3431)
                     /locus_tag="VIY07_08890"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY6381905.1"
                     /translation="MKFAHFSHVWGKPGMNPHQRYEQLWRELQLCDELGFDYGFCVEH
                     HFRPDESWISSPSLYVIGAAARTRRMRIGPMGYVVPLYHPLRLAEEIALVDQMVGGRM
                     ELGLVPGINPDYFKPFGLDYNLRKSPTLEFVEYLRSAYGEKQPFSFHGDAHHTDSAQL
                     AVPPLQRPHPPLWMMSRDPQTLEFCARHGINPGYFLVYPRADAAPRYRKFLADWATAG
                     WPQPPKIAYCTVVYVDDTDEKALDIALGRAARAYEGFLPPPKPGETFEQRVREHAKKF
                     IGRGEPGASEIMANLFDADYLMKHELVFIGSPDTVAKKIHATANSGLFNVFMGEFNFS
                     DLPEADLMRSIRLFGEKVIPALRAYEPF"
     gene            3674..4561
                     /locus_tag="VIY07_08895"
     CDS             3674..4561
                     /locus_tag="VIY07_08895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381906.1"
                     /translation="MASSLKRVRVAPKGMGLNDFVAMQEGFFAAEGLDVEFDWKTFRG
                     TQSSWKGLEYFQRPQDRPYTEEKQDVVQGACVWGTICNASAGMGCVVTEGYGDSPWAI
                     FVRPESKIRKPEDLKDVPVSVGMRAGSHFNVPYRLEKYLSLEHIKTVNTGGFGARLKA
                     LLDGEVEAASLLPPQIAMAEQLGLRKIIEERFKTLWWVPDSATPEVVHGYMRALDRAE
                     QALEEDLAKYLPLWKLSVPAEFESFYPWDFSKFGRGERFVNATLPREEFNEVFAQVER
                     WGLDQYLKDRSPETLSYPT"
     gene            4724..5632
                     /locus_tag="VIY07_08900"
     CDS             4724..5632
                     /locus_tag="VIY07_08900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381907.1"
                     /translation="MKQSPGRQKGVGANTRRDIDLARKSYQHRAWADAYQAFLRADQK
                     APLAAEDLELLAMAAYLVGRDEDYLKTLERAYNVHRNTRQRLRAARCAFWLGFRLLMR
                     GEMGRATAWFSRAQRLLERDARECAERGYLLTPIVEQHLESGDYEAAYATAAEAAAIG
                     ERCGDPDLIACARHQQGRARLQQAQVQAGLALLDETMLMVTAGELSPVVTGLMYCSVI
                     AACQQVYALDRTREWTAALTRWCEGQPDMVAFAGTCQVHRAEVMQLQGTWPEVIEEAR
                     RACARSQGINQRAFAAALYQQQRSIV"
     gene            5740..>6316
                     /locus_tag="VIY07_08905"
     CDS             5740..>6316
                     /locus_tag="VIY07_08905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY6381908.1"
                     /translation="MAATAVRRVASTTVNRLKRMGLLPAYVEIMLAVGDVDDARSACR
                     ELEEIARSFDTVVPDAIAAQARGAVDLAEGDARAALGSLRRASEVWQRIQAPYAAARV
                     RVLIGLACRALGDEDGGGLEFDAARSIFERLGATPDLVGIDSLTMGAVSSDSHRLTPR
                     ELQVLRLVAAGKTNAGVAAELFLSERTVERHL"
BASE COUNT         1224 a         1855 c         1950 g         1287 t
ORIGIN      
        1 tattggaaat cggcaagctt gatcccgaag ctttccatca ccgcgcgcat ggtcgcttgt
       61 cgacctgacg ccggctgacc gatgtcaacg cgcttaccga cgagatcgcg gaagctctcg
      121 atcccggctt tctttcgcgc aatcaggtta aacggctcgg ggtaaagaga catgacgctt
      181 cgcagccgcg tcatcggtcc ccgagatgcg aacagcgagg ttcccttgaa ggcatgcttt
      241 tgccagtccg attggacgat ggccaagtca agttgccctt tctcaagggc gacgaggttg
      301 tagagcgacc cgggggtaga ttccggtgag cagcgaagtc gcttcccatc tgctcggttg
      361 atgacctcgc agatcgctcg cgccgcggcg aagtagccac catccagatc gcctgagcca
      421 attgaaaaca gtcgcaaatc ctgcgcagac aacggttgcg ctaaggtaag aaccgcgatc
      481 aacaccaaca taggtcgcat ttgaaaccta caagaatacc ggggttcctg gagacgacct
      541 gtcctgtatc tttttgcgaa gtaatctttg gttggtcgag ttagaccaag gtcctatctt
      601 tcaaaactcg ggatcgaaat gtcggttttg cggacacgag cagtacaccg ccgcatgttt
      661 atgacccaaa gcgaacatcg gaccgcagag cagaatcacg acggcgtccc agaacgtgat
      721 caatttccga actcttgcgg gcgcactact atcggcccga gatcggaagc ggcacgatcc
      781 atcacgatgc ggtgcatccc tcagaattga ttctgctggt gttagctagc tcaatttgaa
      841 tgtggagtgt gtggacccgc ttttcatatc gcaatcggtg gcatagcatt ctcccaacgg
      901 ccgcaatggc ccattcgaca caaaaatcga tccagggggg cggcgatcat ggcggaaaaa
      961 gtcgttccgg tctcacggct gctcgacgaa cgggggctga gcgcgtttca gatcaaactg
     1021 cttatctggt cgttcttcat tgttcttatc gatggctacg acatcgcggc gatcgccttc
     1081 gcagcgccaa gcctcgtcaa ggaatggggc ttgaaaccgg gcgcgctcgg accggtgttc
     1141 agcgcaagcc ttgttggcat tctgtttggt tcggcgctgt ttggctggat cggcgaccgc
     1201 tacggccgta aggcagcgct ggtctggtcg aatctgctgt tcggcgtttt cacgcttgcg
     1261 gcggcctatg cgaccaatct cgatcagatg ttctggctac gtctactggc gggcctgggt
     1321 atcggcggtg ttatccctaa tatcgttgcc atcaacgccg aatccgcacc acgcaagctg
     1381 cgcgccacgc ttgcgattat cgctgttgga tgtgtaccga tcggcggcgc cattcctggc
     1441 ttcgtcaccg cggcgcttgt accgcaatat ggctggcaaa tcctgtttct gatcggtggc
     1501 atcgtgccga tcgtcatcgc catcgccgcg cagatcggca tgccggaatc aatcaagtac
     1561 atgacgctgc acgaaagcca gcgcggcaag atggagcgtt tgatcacagc catcagtcct
     1621 ggatatccgc tgtcgcctaa cgccaaattc gttatcgagg acgaacagca attcccgggc
     1681 ttcaatccta agtacctctt tggccaaggg ctcgcggtca tcacgccgtt gctctggttg
     1741 ctgtttgccc tgaacctgat gggctatttc ttcttgctca gctggacacc gacgctgatg
     1801 actgcggcca agctgccgcc gacgacggtg gcccttgccg gcgcgagcct gcaggtgggg
     1861 ggcacggtcg gagcgctgtt gctctgctgg tggctgcaac ggcaccgttt cctggccatc
     1921 gcaattatgt ttgcgattgc cgtgccagtg gttggttcga tcggctttgc cggcttgact
     1981 tcccaggctg cgttgctgac cgcgactttc tttgccggct tcctggtgct gggtatccag
     2041 tccggcatca acgtcgttgg cgcgctgatt tatccgacct cgctacgcgc caatggctcg
     2101 ggatggcaat tgggccttgg acgcatcgga tcaatcgtcg gtccgttggt gggtgcgtta
     2161 ttcgtcggca tgccagtgca gcaactctat atgtggtcgg cacttccgtt cgtggcaggc
     2221 gcagtcatct gcttcgcgat ccatcggctc aacaccgccc gcctcgcagc gcatccggaa
     2281 ttagttcagg cgcagtagag gcgactgcgt cctcgatcgc tgaaacgcct tccgttcttt
     2341 catcaaaatg gctcgtaagc gcgcaaagcc ggaatgacct tctcaccaaa caggcggatc
     2401 gagcgcatga gatcggcctc cggaaggtca gagaaattga attcacccat aaacacgtta
     2461 aacaggccgg aattcgcggt ggcatgaatt ttcttggcga ccgtatccgg cgaaccgatg
     2521 aatacaagct cgtgcttcat caggtaatct gcatcgaaca ggttggccat gatctcggaa
     2581 gcccccggct cgccgcggcc gatgaatttc ttggcatgct cacggacgcg ctgctcgaac
     2641 gtttcgccgg gcttgggcgg aggtaagaaa ccctcatagg cgcgggctgc gcgccccagt
     2701 gcgatgtcga gcgccttctc gtcagtgtcg tctacataga cgacggtgca ataggcgatc
     2761 ttcggcggtt gcggccaacc ggccgtggcc cagtccgcga gaaacttgcg atagcgcggc
     2821 gctgcgtcgg cgcgcggata aaccagaaag tatcctggat tgattccatg ccgggcgcag
     2881 aattcgagcg tctgcgggtc gcggctcatc atccatagtg gcggatgcgg gcgctgcagc
     2941 ggcggtacgg caagttgcgc actgtcggtg tggtgcgcat cgccgtgaaa ggagaaaggc
     3001 tgcttttcac cataggccga acgcaaatat tcgacgaatt cgagcgtcgg cgacttgcgc
     3061 agattgtagt cgaggccaaa gggcttgaaa taatcagggt tgatccccgg gacgagcccg
     3121 agttccatgc gcccgcccac catctgatca acgagagcga tttcctccgc cagacgcagc
     3181 gggtggtaca gcggcacgac atagcccatc gggccaatgc gcattcggcg tgtccgggcg
     3241 gcggcaccga tgacgtagag gctgggcgac gagatccagc tttcgtcggg gcgaaaatga
     3301 tgttcgacgc agaagccgta atcgaacccg agttcgtcac acaattgaag ctcgcgccat
     3361 aactgctcgt aacgttggtg cggattcatg cccggcttac cccagacatg ggaaaaatgg
     3421 gcgaacttca ctttgcactc tcctcaagtc gtcgccgcga ggccaattgg gagcgttctt
     3481 tccgaaaatt ccatccggct tgttgaaata cgaaacgcat acccccacgt ggggttatgg
     3541 tggctttggc atcaaagtcg ccctgcggcg aaagatgccc cggggcatgg aacactttcg
     3601 aggggagccc gttcgcatct ttgccatcgg ccgtgataaa ttcttatcaa ccaacatgtc
     3661 caggaggttc gctatggcca gcagcctgaa acgggtcagg gtcgcgccca aaggcatggg
     3721 tctcaatgac tttgtcgcga tgcaggaggg tttcttcgcc gccgaagggc tggacgttga
     3781 attcgactgg aaaaccttcc gcggcacgca gtcgagttgg aaaggtctcg aatatttcca
     3841 gcggccgcag gaccgcccct ataccgaaga aaaacaggac gtggtccagg gcgcctgcgt
     3901 gtggggtacg atctgcaacg ccagcgccgg catgggctgc gtcgttaccg aaggctatgg
     3961 cgattcgccc tgggcaatct tcgtgcggcc ggagtccaaa atccggaagc cagaagacct
     4021 gaaagacgta cctgtctcgg tcggcatgcg tgccgggagc catttcaatg tgccctaccg
     4081 tctggaaaaa tatctttcgc tcgagcacat caagaccgtc aacaccggcg gcttcggcgc
     4141 gcggctgaaa gcgctgctcg atggtgaggt cgaagccgcg agcctattgc ctccgcagat
     4201 cgcgatggct gaacaacttg gccttcgcaa gatcatcgag gagcgtttca agacgctgtg
     4261 gtgggtcccg gacagcgcca ccccagaggt cgtacacggc tatatgcgcg ccctcgatcg
     4321 cgccgagcag gcgctcgagg aagacctggc gaagtacttg ccgctgtgga agctttcagt
     4381 gcctgcggag ttcgagagtt tctacccttg ggatttcagc aaattcggcc ggggcgagcg
     4441 cttcgtcaac gcgacattgc cgcgcgaaga gttcaatgag gtattcgcgc aggtcgagcg
     4501 ttgggggctc gaccaatatc taaaggaccg cagcccggag acgctttcct acccaacctg
     4561 actacgaggc gtgcgtcggg tccgcacgtc ctctattggc ccttagcgga cattgcgctc
     4621 gcgctctcga gtgtctgctt tcggggaaag cggacatggc gatcgcaata caaacacgtc
     4681 cgctatgatc ccaagcggac ctgcgaaacc tgaagcaagg cgcatgaagc agtccccggg
     4741 ccggcagaag ggagtaggtg ccaacacgcg tcgcgacatc gatctcgccc gtaaatccta
     4801 tcagcaccgg gcctgggccg acgcctacca ggcgttcttg cgcgcggacc agaaagcacc
     4861 gttggctgct gaggatctcg aactactggc gatggcggca tatctggttg gcagggatga
     4921 ggattacctc aagacgctcg agcgcgccta caatgtgcac cgaaatactc gccagcgtct
     4981 tcgtgccgct cgttgcgcgt tctggctcgg ctttcgcctg ttgatgcgcg gcgaaatggg
     5041 ccgtgcgacc gcctggtttt ctcgtgctca acgtttgctg gagcgtgacg cgcgcgaatg
     5101 cgccgagcga ggctatctgc ttacgccgat cgtcgagcag cacctcgaat caggtgacta
     5161 cgaggccgcg tatgccactg cagccgaggc cgcggcaatc ggcgagcgct gcggcgatcc
     5221 ggacctcatc gcctgtgcgc gccaccagca aggtcgcgct cgactgcagc aggcgcaggt
     5281 ccaagcgggc ctcgcgctct tggatgagac catgctcatg gtcactgccg gagagctatc
     5341 gccggtcgtg acgggtttga tgtattgcag cgtgatcgca gcctgtcagc aggtctacgc
     5401 cctcgaccga acccgcgaat ggacagccgc cctgacgcgg tggtgcgagg gccaacctga
     5461 catggttgcc ttcgccggca cctgccaggt gcatcgcgcg gaggtcatgc aattgcaggg
     5521 cacctggcca gaggtgatcg aggaagcgag gcgcgcctgc gcgcgctctc agggcatcaa
     5581 ccagcgggct ttcgccgcag cgctctacca gcagcagagg tccatcgtct aaaaggggag
     5641 ttcgcagcag ccgaagaggc gtatcgaggc gcgagccagc ttggcctgga accccagccg
     5701 ggcttagcgc tgttgcgcct tgcgcaggga cgttccgaag tggctgcaac cgccgttcgt
     5761 cgcgtcgcaa gcacgacggt aaatcggctg aaacgcatgg gcttgctgcc cgcctatgtc
     5821 gagatcatgt tggcggtcgg tgacgtcgat gacgcacgca gcgcctgccg agagctggag
     5881 gagattgccc ggagcttcga cacagtggtg ccggatgcga ttgccgcaca ggcgcgcggt
     5941 gcggtggacc tagccgaagg cgacgcgcgg gccgcactcg gctcgctgcg ccgcgcctcc
     6001 gaagtgtggc agaggatcca ggcgccctac gccgctgcgc gcgtgcgcgt gctgatcgga
     6061 ctggcctgcc gcgccctcgg agacgaggac ggtggcggtc tggagttcga cgcggctcgg
     6121 tccatattcg agcgtctggg tgccacaccc gatctcgttg ggatcgactc actgacgatg
     6181 ggcgccgttt ccagcgatag tcatcggctg accccgcgcg agctgcaggt gctgcgtctc
     6241 gtggcggcgg gcaagacgaa tgcgggcgtc gccgccgagc ttttcctgag cgagcggacg
     6301 gttgagcggc acctca
//
LOCUS       DATDHO010000465         5264 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_68135, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000465 DATDHO010000000
VERSION     DATDHO010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5264
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_68135"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            45..724
                     /locus_tag="VIY07_08910"
                     /pseudo
     CDS             45..724
                     /locus_tag="VIY07_08910"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
     gene            979..1377
                     /locus_tag="VIY07_08915"
     CDS             979..1377
                     /locus_tag="VIY07_08915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381909.1"
                     /translation="MRTTLTHATVAAQPGWFLAVFTNSDGIYGVRCEQIIAWEIQRTT
                     SSNGLVIRFPVPITAEGKNTDLDCTIWGIKRPDGKFVFPLGANEGISEEKLARFAHLL
                     ETESRIEKLSVASPSIAYGDPEMASAPRSS"
     gene            complement(1474..1797)
                     /locus_tag="VIY07_08920"
     CDS             complement(1474..1797)
                     /locus_tag="VIY07_08920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine rich repeat-containing protein"
                     /protein_id="HEY6381910.1"
                     /translation="MRCLQRSAGQLSPPCKTALAAVTEGVTASPPATPAENATPSAVA
                     PLTPMPALRPRTALAILRICGEEMRLLCGDTPSGGGRVISCLAEHAPRLSPVCYRALA
                     AARNY"
     gene            complement(2338..2517)
                     /locus_tag="VIY07_08925"
                     /pseudo
     CDS             complement(2338..2517)
                     /locus_tag="VIY07_08925"
                     /inference="COORDINATES: protein motif:HMM:NF013035.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine rich repeat-containing protein"
     gene            2762..3136
                     /locus_tag="VIY07_08930"
     CDS             2762..3136
                     /locus_tag="VIY07_08930"
                     /inference="COORDINATES: protein motif:HMM:NF019013.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030638 - polyketide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ester cyclase"
                     /protein_id="HEY6381911.1"
                     /translation="MDSRETRAFAERLMLEVWEPLDVEAVPRFYNRDVVGHHRKQQLN
                     YEDVVHRLVADRPRYANPTYDIRDIVAEVDKFAIRFLFVATGPSGQSVSAEANYFYHL
                     KDDKVSEFWLLADIDFDYRADV"
     gene            3359..3637
                     /locus_tag="VIY07_08935"
     CDS             3359..3637
                     /locus_tag="VIY07_08935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381912.1"
                     /translation="MSNNDDNHFARWRNSEVSRNFHRLGLLVAAIILAAGLLLMVKDA
                     LGLRLGDLIPADMILAGGIAVGLTAIVLVSLAAYGIIRAIGLAIDRSI"
     gene            3943..4542
                     /locus_tag="VIY07_08940"
     CDS             3943..4542
                     /locus_tag="VIY07_08940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381913.1"
                     /translation="MKVAALAALSVLIAFPADAGQRRQPSNVSTICDNDGRCTTFNAI
                     ARTSSKTPSSRGRIAHRAVDANGNSIMVTVQTAYGFKITVHPAYASKFLKFYALLKER
                     GYKVDPRINKCYSSGGHVAGSNHYIGAACDNQTGWNKAPAYMYHVGDLIRQAGLYDGC
                     RFGDCGHVEAVRGTHNRPPNLYAAIEKFKSEQSTANYQP"
     gene            complement(4597..>5264)
                     /locus_tag="VIY07_08945"
     CDS             complement(4597..>5264)
                     /locus_tag="VIY07_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEY6381914.1"
                     /translation="FLRMIAGIGPMKRYLEGRLQAARETGGEGLIAELIRVEKEGGRI
                     SSEEMVAMVFLLLGAGSETTTHLISGSVYELTRAPALRDWLEEDWSRANLAIEEFLRF
                     VSPVQFTKPRFVGKDIELGGVRLKKGDKIMAMLAAANMDPDANPRPEKLDLERRPNRH
                     LSFGTGIHFCLGHQLARIEGKCALEALFKRWPQLALAVPPESIRWRQRPGLRAIEKLP
                     VAQ"
BASE COUNT         1169 a         1452 c         1556 g         1087 t
ORIGIN      
        1 aagacgttct gcaagtcgat caaaccgcca gcatcaaagc cgagctgaag tggtttgccg
       61 gagcgctcac gcctgcgcgc gaatttgaag tgctcactga acgggcgata gcgccattta
      121 aggagccgca cagcaaaaat ccggatggcc tcgcatcatt ttcgaaagcg gtcacacaca
      181 agcacaaggc ggcgctggcc cgggcgaagg aggccgttgt atcgtttcga tttcgcagct
      241 tggtcttcga ggttacgtct tggcttgagg tcggcgcttg gaccaatcag ctgatgatct
      301 ggtgcgaagt cggggcgaag ttgcaatcaa aaccttcgcc gcagaacaat tacagcgacg
      361 aagccgcaag gtgcgtaagc gtgggagacg acttgcagag ctcagcgccg agagacgcca
      421 cgaattgcgc attcgcgtca aaaaattgcg ctacgcggcc gagtttttca ccgggctgtt
      481 tgaggccaaa aaagccatca ggaggcagaa gaaatttaaa tccgccctta ggcggctgca
      541 gggcggcctt ggagatctta acgatattgc cgttgataag agcttgatcg ccggcgttgc
      601 tccccccaag cgtggcttcg ctgccgggct gctaaccggg cgtgaagagg cgcgtgaaaa
      661 caagacgatg ttggcggcgg ttgaagggca caaggacttt ctcaaggtca aatcattctg
      721 gtgataaatc cggtgtctgg gatgagagag cattttctcc ccgaagatgc cgcagcgaac
      781 cgccgaagaa ctaggacgcc ttttcgcgca acggtgacga gccgagtgaa aataccagct
      841 agggtcggga ggtaataaca tacggagagt tcaatcgggt gtcacattac actgcgaacg
      901 tttctgctgc cgccgattgt ttccgagggc aaaaacaagc ggcgagtgta acagtgcgtt
      961 caccaggaga agccagcaat gcgaacaacc ctgacccacg ccaccgtagc ggcacagccg
     1021 ggatggttcc tcgcagtttt taccaacagc gacggtatct acggtgttcg ttgcgaacag
     1081 atcatcgctt gggaaattca aagaacgaca tcgtccaacg gacttgtgat ccgatttccg
     1141 gtgccaatca cggcggaggg caagaataca gacctggatt gcacgatttg gggcatcaaa
     1201 cggcccgatg gcaaatttgt gtttcccctg ggcgcaaacg aaggaataag cgaggagaaa
     1261 ttggcaaggt ttgcgcattt gttggaaact gaatcacgga tcgaaaagct aagcgttgct
     1321 tcgcccagca tagcttatgg cgatccagaa atggcctctg ccccgcggag cagttgatag
     1381 caaactattc accgcattga cggaaattgc ctaccgcatg cgcgattcga ttttgttggc
     1441 gtgacggcgc gtcatttcgc cggaaggtcc ggctcaatag ttgcgtgcgg ccgccaaagc
     1501 tcggtaacac accggcgata gacgcggggc gtgctcggca agacacgaga tcacgcggcc
     1561 gccgccggat ggagtgtcac cgcacaacag ccgcatttcc tcgccgcaaa tccgcaggat
     1621 cgccaacgcc gtgcggggac gcagcgcagg catcggtgta agcggagcaa ccgcagaggg
     1681 tgtcgcattc tcggcaggcg tcgccggtgg cgacgcagtc acgccttcag tgacggcggc
     1741 gagagcggtc ttacacggcg gcgaaagctg cccggcgctg cgctggaggc aacgcaatgc
     1801 ttgcgccccg ccaggctgaa ccgcggaaca atgcgatatg aagtcagagc ggcaagccac
     1861 tcggatcgcg tttttctgct cgccagttgg cttgcgaagc atgcccgctt gagaagaaac
     1921 cggcgggctt ggcgggcttg catgtgcagg ttcggatttt ctcggctggg gcgccgtctg
     1981 ctccccgtgt ccgctctcgg ccggtgacga gggagacact gcatcgggtc gcgatgcaat
     2041 ggctgcacgg caaggcggcg acagcccggc ggcgttggcc ttcagacaaa gcatcacttc
     2101 agggctgctt ggttgaatcc aagagcaatg cgccatgaag tcatccagcg tgcacgcctg
     2161 tcggatggct ttgatctgat cgtcctgcgt ttgcgcccgg ccggcctttg ccgtgttccc
     2221 tgcgctggct gccggcgtcg acgcggcatg ttctccggcc gctggctcgg gtttgcgagc
     2281 caccgcgctc acggccgact tgcaggatgc cgaaagctgc gcgtcgtttt taagcaagca
     2341 ctccaaggct tccttgcctc ccggctgaac gctggagcaa tgcgccatga agtcagagcg
     2401 gcacgcggag cggatcgcat cacgctcggc ctccgtcggc tcctgtgccg cgattggatc
     2461 gaacgctaac gcaatgagaa atcctgcaag tagcaaaggc cgggaggaat tccgcatggt
     2521 tgttactcgt tcagatgggg aacggcagaa acgaggctag tgattttttg cgaccatgcc
     2581 aatcgtcgac gccgaagcga ataccgccct aacggttgag aatattcgcg tcggaagtct
     2641 gccactcgcg ccaatgaata gggtaaagcg gatagagcag gacacgaaaa atgatcggta
     2701 tgacgcgaaa aatctcgcaa agcaccatcc gacaaccgaa agctcgcaga gagcaaggat
     2761 catggacagc agagaaaccc gggcgttcgc agagcgcctc atgcttgaag tctgggagcc
     2821 gctcgatgtc gaagctgttc cacgtttcta caatcgtgat gtcgtaggcc accatcgcaa
     2881 gcagcaactc aactatgagg acgtggtgca tcgcctggtg gcggacaggc cgcgctatgc
     2941 caatccgacg tatgacatca gggacatcgt cgccgaggta gacaagtttg caatccgttt
     3001 cctgtttgtg gcaaccggac catccgggca atcggtttct gcggaggcga actatttcta
     3061 tcatctgaag gacgacaagg tttctgagtt ctggttgttg gccgatatcg actttgatta
     3121 cagggccgac gtttagcgcg attattggcg ggcgatttca gtgcttttgc cccaaaagcg
     3181 aacgcgagcg ctctcttaac gagccgcaac gaaatcaata tagtggtatc ttcgtcggct
     3241 gaatgagacg gcgagagttc atgtgtttga gagtggagca atcgccgtgt ctcagaggct
     3301 actattcggt gcatttctat ttgcgtcagc ggttacttcg tcgcgctagg agatgctcat
     3361 gagcaacaat gacgacaacc atttcgctcg ctggcgaaat tcggaggtaa gcaggaattt
     3421 tcatcggctg ggactgcttg ttgcagcgat catcctcgcg gcgggccttt tgttgatggt
     3481 aaaggatgcg cttggcctca ggctggggga tttgattcca gctgatatga ttctcgcggg
     3541 cggcatcgct gtgggcctga ccgccattgt attggtttca ttggccgcat acggcatcat
     3601 ccgcgcgata ggtttggcga ttgacaggtc tatctagagc cgttgcgacg tgatcacgag
     3661 cgacgcacga cgcgattgca ctttcttccg atgcagcgtt cctcgatgcc gcatttgctc
     3721 tatgtcgagc agatcgtcgc cgctacctct gcgggtaagg tgatatggat ttgcgccacg
     3781 aaatgtccgc atttaccgaa aacataggtg ccctgcttcg cattaaggtt tcttccttac
     3841 ggtaaatttg ggaatacgaa ccgaataccg cgcatcgacg cgcgactcat tagaatatgc
     3901 ggaagaccgc atccgcagcg gtggtccacc aaggagtaga gcatgaaggt cgccgcactt
     3961 gctgccctca gtgtgctcat tgcttttccg gcagacgctg gacagcgtcg tcagccaagc
     4021 aatgtttcga caatttgtga caatgatggc cgctgcacga cttttaacgc gatcgcgcgc
     4081 acatcgagca agacaccaag ttcgcgcggg cgtatcgcgc atcgcgccgt cgatgctaac
     4141 ggcaacagca taatggtgac ggtgcaaaca gcctatggct tcaaaatcac ggtgcacccg
     4201 gcctacgcca gcaagttcct gaagttctat gccttgctga aggaacgcgg atacaaggtc
     4261 gacccccgca tcaacaaatg ctattcgagc ggcggtcacg tcgccggctc caaccattac
     4321 atcggcgccg cttgcgataa tcagaccggt tggaataaag cgcccgccta tatgtaccat
     4381 gttggcgatc tgatcaggca ggccggtctc tacgatggtt gccgctttgg tgattgtgga
     4441 catgtcgaag ctgtgcgcgg tacgcacaac aggccgccca atctctatgc cgctatcgaa
     4501 aaattcaaat cggagcaatc gacagcaaac tatcaaccgt aggcatcttc aagagcggtt
     4561 gtgttgctcc accacgtgat cgaggaacaa caggcgttac tgcgcaacag ggagcttttc
     4621 gatagccctg aggccaggcc gttgccgcca gcgaatggac tccggcggca cggccagcgc
     4681 gagttgcggc cagcgcttga agagggcctc cagcgcgcac ttaccctcaa tacgggcgag
     4741 ctggtggccc agacagaaat ggatccccgt gccgaaagac aggtggcggt tgggtctcct
     4801 ctcaagatca agcttctcag gacgcgggtt tgcgtcagga tccatgttgg ctgctgccag
     4861 catggccatg attttgtcac ccttcttcag ccgaaccccg ccgagctcga tgtctttccc
     4921 gacgaaacga ggcttggtga actggacggg tgagacgaag cgcaagaatt cctcaattgc
     4981 caggttcgcg cggctccaat cctcctcgag ccaatcgcgc aacgcggggg ctctggtgag
     5041 ttcgtagacc gatccgctga tcaaatgtgt ggtggtttct gatccggcac caagcagcag
     5101 aaagaccatc gccaccatct cctcgctgct gatgcgcccg ccttccttct cgacgcgaat
     5161 caattccgcg atcagacctt ctccgccagt ctcgcgagca gcctgcaagc gcccctccag
     5221 gtagcgtttc ataggcccaa tgccggcaat catgcggagg aagc
//
LOCUS       DATDHO010000466         1544 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_220337, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000466 DATDHO010000000
VERSION     DATDHO010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_220337"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..212)
                     /locus_tag="VIY07_08950"
     CDS             complement(<1..212)
                     /locus_tag="VIY07_08950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381915.1"
                     /translation="MSAFGLCVLAHFAHFLSHALGVNQPLRFLKRFVAAEAIGLDRNQ
                     IKRLVLACHFDLAAIGFGNYRSPRSI"
     gene            complement(273..680)
                     /locus_tag="VIY07_08955"
     CDS             complement(273..680)
                     /locus_tag="VIY07_08955"
                     /inference="COORDINATES: protein motif:HMM:TIGR03605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SagB family peptide dehydrogenase"
                     /protein_id="HEY6381916.1"
                     /translation="MQGACPRFYHYDAGGHALVPIAARTHHLEALLTGAKFAMDAPAV
                     PQVLITIAARFGRISWKYCSLAYALLLKDVGVLTQTLYLIATDMGLGGCAIGTTNIDL
                     FARITGIEFHIEGAVGQFALGRSKLRFQGEMRT"
     gene            complement(617..>1544)
                     /locus_tag="VIY07_08960"
     CDS             complement(617..>1544)
                     /locus_tag="VIY07_08960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="dehydrogenase"
                     /protein_id="HEY6381917.1"
                     /translation="FGGRNIDKEIYVLVRRLARRGLLEYSLSNSRNDEDQVVIEPQVA
                     DYWPKNPPLGNTDVLALSRFAYMRRRGNDMVLESPCAGALFRICNPKIAAAIAALSTP
                     QQIRRFRGHYGFPGIEFLALLVDCQILFKTKATTDRGPRLAEGDHNLVLWDFHDLLFH
                     TRSTEGRHANPLGGLYPYAGVVAPLPAVRPRWPGKKIALHKFSVAHSKTISPVVKILH
                     ERHSSRTFDDQSPITLAELSRVLDNAARVLSRWRSKVDFGDGGQLVEYAVKPYPSAGA
                     SYELELYLAVDQCKGLARDSIITMPAGTHWCR"
BASE COUNT          359 a          434 c          449 g          302 t
ORIGIN      
        1 ctaatggatc gtggcgagcg ataattacca aagccgatgg cagcaagatc aaagtggcag
       61 gccaaaacga gtcgtttgat ctgattccta tccaacccga tagcctcggc cgcgacaaag
      121 cgtttgagga agcgaagcgg ctggttgacg ccaagggcgt gacttaagaa atgagcaaaa
      181 tgcgcgagaa cgcacagccc gaaagcggac atgtgcggtg caattaggga tgtctgctat
      241 gggccataag cggacatccg cggcgcaaaa tgtcatgtcc gcatttcccc ctgaaagcgg
      301 agtttgctgc gaccaagcgc aaattggcca accgcgccct cgatgtggaa ttcgatcccc
      361 gtaatccttg cgaacagatc gatattggtg gtcccgatcg cacatccgcc gagccccata
      421 tcagtagcga tcaggtagag cgtttgagtg agcacaccaa cgtccttcag gaggagcgca
      481 taggcgagcg agcagtactt ccaagaaatc cggccaaagc gagcagcaat cgtgattagg
      541 acttgaggca cggcgggcgc gtccattgca aatttagctc cggtcaacag cgcttcgagg
      601 tgatgagtgc gggcggctat cggcaccaat gcgtgcccgc cggcatcgta atgatagaat
      661 ctcgggcaag ccccttgcat tggtccaccg ccagataaag ctctagctcg tagctggcgc
      721 cagccgacgg atacggcttg acggcgtact ccaccaactg accgccgtcg ccaaagtcga
      781 ccttgcttct ccatctcgac aggacgcgcg ccgcgttgtc gaggacccgc gaaagctcgg
      841 cgagagtgat cgggctctgg tcatcgaagg tgcgactcga gtgacgctca tgaaggattt
      901 ttacaaccgg cgagattgtc ttcgaatgcg cgacggagaa cttgtgcaac gcaatcttct
      961 ttcctggcca tcgcggccgc accgccggga gcggagccac gacacccgca tagggataaa
     1021 gcccacccag tgggttggcg tgtcgacctt ccgtgctgcg cgtgtggaac agaagatcgt
     1081 gaaagtccca aagaaccagg ttgtggtcac cctcggccaa tctgggaccc cgatcggtag
     1141 tggcctttgt cttgaaaagg atttggcaat caaccagcaa agcgagaaac tcgatccccg
     1201 gaaagccgta gtgcccacga aaccttctga tttgctgggg cgtggacagt gcggcgatcg
     1261 cggccgcgat ctttggattg caaattctaa acaacgcgcc ggcgcacggc gattccaaca
     1321 ccatgtcgtt tccgcgccgg cgcatgtacg cgaaccgtga cagggcgaga acgtcggtat
     1381 tgccgagcgg cgggtttttc ggccagtagt cggcaacctg cggttcgatg acaacttggt
     1441 cttcatcgtt tcgtgaattc gagaggctat actccaatag accacgtctg gctaatcgcc
     1501 ggaccaatac gtaaatttcc ttgtcgatgt tcctgccgcc gaac
//
LOCUS       DATDHO010000467         9499 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_464525, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000467 DATDHO010000000
VERSION     DATDHO010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 9499)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9499)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9499
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464525"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1207)
                     /gene="miaB"
                     /locus_tag="VIY07_08965"
     CDS             complement(<1..1207)
                     /gene="miaB"
                     /locus_tag="VIY07_08965"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEY6381918.1"
                     /translation="MSRPRKVHVKSFGCQMNVYDSHRMADTLAPEGFTETATPEDADL
                     VILNTCHIREKAAEKVYSEIGRIRELKEAAARDGRQMIIAVAGCVAQAEGKEIIRRAG
                     AVDLVVGSQNYHRLPQMIARARLGERVVDTEFPVEDKFEILAAPEQSAIARRGISAFV
                     TVQEGCDKFCTFCVVPYTRGAEVSRPVEKIVDEVERLAQAGVREVTLIGQNVNAYHGA
                     GPDGRPATLGNLLRRLAQVSGIFRLRYTTSHPRDVDNDLLAAHAELPALMPYVHLPVQ
                     SGSDRILSAMNRRHTRRDYLNVIARLRSARADLAFTSDFIVGFPGETETDFQATLTLV
                     EEIGFAGAFSFMYSARPGTPAAEMTDQVPPEEKSERLQRLQAVISRHQRNFNAGFAGR
                     TIDVLLEKPG"
     gene            complement(1322..2110)
                     /locus_tag="VIY07_08970"
     CDS             complement(1322..2110)
                     /locus_tag="VIY07_08970"
                     /inference="COORDINATES: protein motif:HMM:NF013702.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY6381919.1"
                     /translation="MVRALFIGAFFLTMTPLLISLQWLLDKLHLPGWGFISCNYYRVL
                     CFLLRIRVRMAGAPMRGRAVLFVCNHVSWVDIVVIGSIAPIAFVAKREVASWPLIGIT
                     AKLQRTVFVDRTRRHLTGDAVAEIVGRIRNGVSVVLFAEGTSSDGNRVLPFRSALLGA
                     VEEAGSAGEERILMQPMSIGYTGQYGIPMGRQHRPLVAWYGDLHFVPHIRTFIERGAV
                     DAVISYGEPAPADSNIDRKAITKQLESTVRRLSAAALRGLAPIG"
     gene            complement(2110..2496)
                     /locus_tag="VIY07_08975"
     CDS             complement(2110..2496)
                     /locus_tag="VIY07_08975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEY6381920.1"
                     /translation="MRMTEQRRVIARVLAQSDDHPDVEELYRRCVKVDDRISISTVYR
                     TMRLFEDAGIIERHDFRDGRARYETSPDIHHDHLINLRTGEIIEFQSEEIERLQTEVA
                     RKLGYKLVDHRLELYGVPLGDEKTKR"
     gene            complement(2643..3128)
                     /gene="rimI"
                     /locus_tag="VIY07_08980"
     CDS             complement(2643..3128)
                     /gene="rimI"
                     /locus_tag="VIY07_08980"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEY6381921.1"
                     /translation="MINFITGLFSRGEASLSEASARDASAIASLHSASFRRGWSEQEV
                     EGLLIDRHVIAHRAMIDRKLAGFIMSRIVEDEAEILSVAVAGRQRGRGLARQLLDLHL
                     RRLAGLGARTVFLEVDEHNDPALRLYRRAGFSEVSRRANYYSAGDGQAASALVLRREL
                     F"
     gene            complement(3125..3808)
                     /gene="tsaB"
                     /locus_tag="VIY07_08985"
     CDS             complement(3125..3808)
                     /gene="tsaB"
                     /locus_tag="VIY07_08985"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEY6381922.1"
                     /translation="MRVLAIDTALEACSVAVFDTAHADARAQETLPMQRGHAETLMPL
                     IERMLSRAEIDAADLDRIAVTTGPGSFTGLRVGIAAARGIALTSGKPAIGLTTLAAFA
                     APFIAADDTLPVVVAIDTRHDHVYLQVFGPGGRTVVAPRVTPLREALRVSTGGAPRII
                     GTAANKLAASWPSSERRPSVVEQRGAPRIEWVARLGAAATDTDTPPKPVYLRAPDAHP
                     QDAVQLARR"
     gene            complement(3926..4486)
                     /locus_tag="VIY07_08990"
     CDS             complement(3926..4486)
                     /locus_tag="VIY07_08990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEY6381923.1"
                     /translation="MFIQTEATPNPATLKFLPGRNVLENSTLDMPTKESAAQSPLAAR
                     LFDIPNVGGVFFGSDFISVTKTDGDWQQMKPAILGAIMEHYMSGAPLLADGAKPEHAA
                     AEEFFDAKDAETVATIKDLIETRVRPAVAGDGGDITFRGYKEGVVYLNMKGACSGCPS
                     STATLRHGIQNLLRHFVPDVVEVRPM"
     gene            complement(4591..5085)
                     /locus_tag="VIY07_08995"
     CDS             complement(4591..5085)
                     /locus_tag="VIY07_08995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY6381924.1"
                     /translation="MSSKRRSYEAGHKRKYLVVIDDTEECDRAVYWAAKRAGRTKSQI
                     VMLRVIEPGDRNQQWLGVADIMMAEQREAANAALDKFAARAKEIAEITPDRVIREGDT
                     AEEIVKLIDDDADIGILVLAAGTGKEGPGPLVSNLAKTAGTFPIPVALVPGHLSDDEI
                     DASS"
     gene            complement(5190..6224)
                     /gene="trpS"
                     /locus_tag="VIY07_09000"
     CDS             complement(5190..6224)
                     /gene="trpS"
                     /locus_tag="VIY07_09000"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEY6381925.1"
                     /translation="MAFKERVFSGVQPTGNLHLGNYLGAITRFVALQERYDCIYCVVD
                     LHAITVWQDPTELPRATREVTAAFLACGIDPKKNIIFNQSQVAEHAELAWIFNCVARV
                     GWLNRMTQFKEKAGKDRENASVGLYVYPNLMAADILVYRATHVPVGEDQKQHLELSRD
                     IAQKFNNDFAASIHAHGLGSAFFPLPEPLIQGPATRVMSLRDGSKKMSKSEASDYSRI
                     NLTDDADAIAQKIRKAKTDPEPLPSEEKALAPRPEADNLVGIYAALQGVSKAEVLGQF
                     GGGQFSAFKTALADLAVAKLGPIGAEMKKLVQDPVYIDSVLADGSQRAQKIAAETMKA
                     VKDIVGFVHR"
     gene            complement(6290..7846)
                     /gene="murJ"
                     /locus_tag="VIY07_09005"
     CDS             complement(6290..7846)
                     /gene="murJ"
                     /locus_tag="VIY07_09005"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEY6381926.1"
                     /translation="MSLARDITTVGSGTLISRLLAYLRDAWIAALLGAGAHSEALFVV
                     LQIVNFFRRLLSEGALNGAFVPIWLKLRGGDDGPANAARFTQRVLLVMFCIVGFIALL
                     VIFFAPTIITVIAPGFDRGRRSLAAFLLFLATPYIVLAGLVAVIAAALNAEGRVRAVV
                     ISTVMFNLVMVLALGVLPRGDVDPFYVTAWLALAVSVAGLLQLVLTSVVWLSTGNRWH
                     RAHTHAPDQTEAFFKRAFPGLIAAGVPQLKLIAITAIASASPAAVSWLYYANRLYELP
                     LGVVSVAIAAVVVPRIASGVIAGDDHALATAQSRAYEIALGLALPAAAGFVLLANPIT
                     GGLFERGAFGPQDTAAVAGALAAISAGLPGHVLEKTFGAVSFAHEDTQTPMAAALCGL
                     AAAIVGGMLLFPHYGHIGLAAAFAASGWVGAAVLGSILFRRRWLRLDEDARRRLPRIA
                     IATAIMGTAVLLGAVVAHEVFPTAGSSTTGRLVMLTVLVTLGVAIYAIALRALGIATL
                     RELLAGMRAR"
     gene            7965..8966
                     /locus_tag="VIY07_09010"
     CDS             7965..8966
                     /locus_tag="VIY07_09010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HEY6381927.1"
                     /translation="MTNLRYDVLGIGNAIVDVIARAEDDFLVEHGMHKGSMALIDEAR
                     AQAIYAAMGPAVESSGGSAANTIVGVASFGARASFIGKVRDDDLGRIFAHDIRAANVA
                     FETEPAISGPSTARSYIMVTPDGERTMNTFLGAAQDLTTADIDEARVASAAITYLEGY
                     LWDPPQAKEAFVKAAEIAHKNKRRVALTLSDAFCVDRYRTEFLDLIRKGTVDIIFANE
                     RELHSLYETADFASAAKALRDDARLAVVTRSEKGCVVVTGDSVEPVAAEPVDKIVDVT
                     GAGDLFAAGFLVGLSRGKDYRTSARLGALAAAEVIQHVGARPAVSLKALAAKNGLSI"
     gene            9167..>9499
                     /locus_tag="VIY07_09015"
     CDS             9167..>9499
                     /locus_tag="VIY07_09015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381928.1"
                     /translation="MDKRKAATDGEAVAQPDNASGQPQPNIELPAVESPSISPADMIG
                     TTNSAGEASPIESTDALNASNETAAMGTQGYARIGHLTAPKRPRLILRPRHRRYAVLA
                     ASVAIAAAL"
BASE COUNT         1912 a         2863 c         2944 g         1780 t
ORIGIN      
        1 tgccgggttt ttcgagcaac acatcgatgg tgcgcccggc aaaaccggcg ttgaagttgc
       61 gctgatgccg cgagatgacg gcctgcaggc gctgcaggcg ctcggatttt tcttccggcg
      121 gtacctgatc cgtcatctcg gctgctggtg ttccagggcg cgccgagtac ataaacgaaa
      181 aggcgccggc gaaaccaatt tcctcgacga gcgtcagcgt ggcctggaaa tcggtctcgg
      241 tctcgccggg gaagcccacg atgaagtctg aggtgaaggc aagatcggcg cgcgcggaac
      301 gcaggcgcgc aatcacattc aggtagtcgc ggcgcgtgtg cctgcgattc atcgccgaca
      361 gaattcgatc ggagcctgac tgcaccggca aatgcacata aggcatcaat gcagggagct
      421 cggcatgggc ggcaagcaga tcgttgtcca catcgcgtgg gtggctggtg gtataacgca
      481 ggcgaaaaat gccagatacc tgtgcaaggc ggcgcagcaa atttcccagc gtcgccggtc
      541 ggccatcggg ccccgcccca tggtaggcat ttacgttttg tccgatcagc gtcacctcgc
      601 gcacgccagc ttgggcgagt cgctcgactt cgtccacgat cttttcgacc ggccgcgaaa
      661 cttcggcccc gcgcgtatac ggcaccacgc agaacgtgca gaacttgtca cagccttcct
      721 gcacggtgac gaaagcggaa atgccgcgcc tggcgatggc gctttgctcg ggcgcagcaa
      781 ggatctcgaa cttgtcctcg acggggaatt cggtgtcgac aactctctcg ccgagccgcg
      841 cccgtgcgat catttgcggc aggcgatgat agttctgcga gccgaccacc aggtcgacag
      901 cgccggcgcg gcgaataatc tccttgccct cggcctgcgc cacgcagccg gcaaccgcga
      961 ttatcatctg gcggccatcg cgcgcggccg cctctttcag ttcgcggata cgaccaatct
     1021 cggaatagac cttctcggca gctttttcgc ggatgtggca ggtgttcagg atgacgagat
     1081 cggcatcttc cggcgtcgcg gtctcggtga agccttcggg tgccagggta tccgccatac
     1141 gatgcgaatc gtagacgttc atttggcagc caaatgactt tacgtggact ttgcggggtc
     1201 tgctcatgcc gtgccggtga atctagcgtg ttgtggcggg atttgtcccg cgtgtccata
     1261 tatttgattt tacaacgatt ttaatagcag ggctgacttt tccgacggat aaacacgtgt
     1321 cttacccaat cggtgcgagt ccccgcaagg cggccgccga aagccgtcgt acggtgctct
     1381 ccagctgttt cgttatcgct tttcggtcga tgttgctgtc ggcgggtgcc ggctcgccgt
     1441 aagagatcac ggcgtctacc gcaccgcgtt cgatgaaggt cctgatgtgg ggcacgaaat
     1501 ggaggtcccc gtaccaggcg accagcggcc ggtgctggcg tcccatggga attccatatt
     1561 gcccggtgta gccgatcgac atcggctgca tcagtatcct ctcttcaccg gcgctgcctg
     1621 cttcctcgac agcaccgagt aaggccgagc ggaagggcag cacccggttc ccgtcgctcg
     1681 aagttccttc cgcgaacagg acgaccgaaa cgccattcct gattcggccg acaatttcgg
     1741 ccacggcatc gccagtgaga tggcgacgcg tgcgatctac gaacaccgtc cgttgcagct
     1801 ttgccgtgat gccaatcaga ggccagctcg cgacttcgcg ctttgcaaca aaagcgatgg
     1861 gcgcgatcga accgatgacg acaatgtcaa cccaggatac atgattgcac acgaacagga
     1921 ccgcgcgacc gcgcatcggc gcacctgcca tgcgtacgcg gatgcgcaac agaaaacaga
     1981 gtacgcgata gtaattacac gatatgaagc cccacccggg cagatggagc ttgtcgagca
     2041 gccactggag cgagatcagc agcggcgtca tcgtcaggaa gaaagccccg atgaaaagtg
     2101 cgcgcaccat cagcgcttgg tcttctcatc gcccagcggc acgccgtaaa gctcgagcct
     2161 gtgatcgacc agtttatagc cgagcttgcg cgcaacctcc gtctgcagcc gttcgatctc
     2221 ctccgactga aactcgatga tttcaccggt acgcaggttg atcagatggt catgatggat
     2281 gtcggggctc gtctcatagc gtgcacggcc gtcgcgaaaa tcgtgccgct cgatgatgcc
     2341 ggcgtcctcg aataagcgca tggtccgata gacagttgaa atcgaaattc gatcgtcgac
     2401 cttgacgcag cgacgataaa gctcttcgac atcgggatga tcgtcagatt gagcaagaac
     2461 gcgcgcaatg acgcggcgct gctcggtcat gcgcatcccc ttggccgcgc aaagagcctc
     2521 gatgtttttc ttctcggtga tgttcctgcc agcagtgctc acggcacgtc tctaacgtcg
     2581 gttcggcacg gcatttatgg ctttcctatc atattgacgg tgtccggcat gtgtccacca
     2641 gctcaaaaaa gttcacgccg gaggacaagg gcggaggctg cttggccgtc gcctgcggaa
     2701 tagtaattgg cgcggcgcga tacctcgcta aaccctgccc ggcggtaaag gcggagcgcc
     2761 gggtcattgt gttcgtcgac ttccagaaaa acggtgcgtg caccgagacc tgccagccgg
     2821 cgcaggtgca gatcaagaag ctgtcgcgca agcccccgac cgcgctggcg gccggcaacg
     2881 gcaaccgaca ggatttctgc ctcatcctcg acgatccggg acatgatgaa acccgcaagc
     2941 tttcgatcga tcattgcgcg gtgagcgatg acgtgtcggt cgatcaataa gccctcgact
     3001 tcctgttcgc tccagccgcg cctgaacgat gcactatgca gtgatgcgat cgcagaagcg
     3061 tcgcgcgcgc tcgcttccga tagcgacgct tcgccgcgcg aaaaaagacc ggtaatgaaa
     3121 ttgatcatcg gcgggctaat tgcacggcgt cttgcgggtg agcatcggga gcccgcaggt
     3181 aaaccggctt gggtggcgta tcagtgtcgg tcgcggcggc gccgagtcgc gccacccatt
     3241 cgatgcgagg cgcaccgcgc tgttctacca cgctgggacg acgttcgctc gaaggccacg
     3301 acgctgcgag cttgttggct gccgtgccga tgattcgagg cgcaccgccc gtcgagaccc
     3361 gaagtgcttc acgcaatggc gtgactcgcg gcgcgaccac ggtgcggccg ccggggccaa
     3421 acacttgcag gtagacgtgg tcatggcgag tgtcgatggc tacgacgacc ggaagcgtgt
     3481 cgtcggcggc gataaagggt gcagcgaaag ccgcgagcgt cgtcaagccg atcgctggct
     3541 tgcccgaagt gagggcaatg ccgcgagcgg cggcaatgcc gacgcgaagg ccggtgaagc
     3601 tcccaggccc ggtcgtcacc gcaatgcgat cgaggtcagc ggcgtcgatc tcagcgcgac
     3661 tgagcatacg ttcgatcagt ggcatcaggg tttcggcgtg accgcgctgc atgggaagtg
     3721 tttcctgcgc ccgtgcatcg gcgtgcgcag tgtcgaatac tgcgaccgaa cacgcctcaa
     3781 gagcagtatc gatggcaagg acgcgcattc agaatccgct tgcgatcttc cgcaaagaac
     3841 ggttgatcca gtgaccgctg acggttcgat tgtaccttaa atgcggagcg tcccgtgaga
     3901 ccccgttttt ttccgcaggg cacaattaca ttggccgaac ttcgaccaca tccggcacga
     3961 aatggcgcag aaggttctgg atgccatgcc gcagggtggc agtcgaggag gggcaacccg
     4021 agcaggcacc cttcatgttg agatagacga cgccttcctt gtagccgcgg aaagttatgt
     4081 cgccgccgtc gccggcgacc gccggacgga cgcgcgtctc gatcagatcc ttgatggtgg
     4141 caacggtctc ggcgtccttg gcatcgaaaa attcttcggc tgcagcgtgc tccggctttg
     4201 cgccgtcggc cagcagcggc gcaccggaca tatagtgctc catgattgcg ccgagaatcg
     4261 cgggcttcat ctgctgccag tcgccatcgg tcttggtgac cgaaataaag tccgacccga
     4321 agaaaacgcc gccgacgttg ggaatatcaa aaaggcgcgc ggccaaaggc gactgcgcgg
     4381 cgctctcttt cgtcggcatg tcgagggtgc tgttttcaag cacgttgcgt cccggaagga
     4441 actttagcgt cgcgggatta ggcgtggctt cggtctgaat gaacatctga tcgctccttg
     4501 cctcatgcgg gttaaaggcc cgccggcgga agaattatag cgcataaatg gctattgggc
     4561 gccacgtggt caaccggccc gtggtccaac ctacgagctg gcgtcgattt catcgtcgct
     4621 gagatgcccc gggacgagag ccaccggaat gggaaatgtg ccggcggtct tggccaggtt
     4681 agagaccagc ggcccgggtc cttcctttcc cgtgcccgcg gccagaacga gaatcccgat
     4741 atcggcgtcg tcgtcgatca gtttaacgat ctcttcggcc gtgtcgccct cgcggattac
     4801 ccggtcaggg gttatctctg cgatctcttt cgcccgtgcg gcgaatttgt cgagcgccgc
     4861 gttcgctgcc tcccgttgct cggccatcat gatgtcggcg acgcccagcc attgctgatt
     4921 gcggtcgccg ggttcgatga cgcgcagcat cacgatttgc gacttcgtgc ggccggcgcg
     4981 tttggctgcc cagtagaccg ccctgtcgca ttcttcagtg tcgtcgatga caaccaggta
     5041 tttgcgcttg tggccggcct cgtagctgcg acgcttgcta ctcatgggcg cgacgctccc
     5101 gtgcgatcat gttcgtcatt ctgaattcag aagtgccaat ggtggcacgc cggctgccgc
     5161 gccgacaagg cgggtgtacc gcgccgtaac tagcgatgca cgaagccaac gatatccttg
     5221 acagccttca tggtttcggc ggcgatcttt tgcgcacgct gcgatccatc ggccaataca
     5281 gaatcgatat agacagggtc ctgcacaagt ttcttcattt ccgcgccgat cggtccgagt
     5341 ttcgcgacgg caagatcggc cagagctgtt ttgaaagcag agaattggcc gcctccgaac
     5401 tggccgagca cttcggcttt gctgacgcct tgcaacgcag cgtagatgcc taccaggttg
     5461 tcggcctcgg gtcgcggcgc cagagctttt tcctcgctcg gaagaggctc ggggtcggtc
     5521 ttcgccttgc ggatcttttg cgcaatcgca tcggcatcat cggtaagatt gatgcgcgag
     5581 taatcggacg cctccgactt cgacattttc ttcgagccat cgcgcaacga catcacgcgc
     5641 gtcgcgggcc cctgaatcag cggctcgggc agcggaaaaa acgcgctgcc gaggccgtgc
     5701 gcatgaatgg atgcggcgaa atcattgttg aatttctgtg caatgtcgcg cgagagctcc
     5761 agatgctgtt tctgatcctc tcccaccggc acatgcgttg cgcggtagac caaaatgtct
     5821 gcagccatca ggttcggata gacatacagt ccaaccgagg cgttctcacg atccttgccg
     5881 gccttctcct tgaactgggt catacgattg agccagccga cgcgagccac gcaattgaag
     5941 atccaggcga gctcggcatg ctcggcgacc tggctctggt tgaagatgat gttcttcttg
     6001 ggatcgatgc cgcaggcgag gaacgcggcg gtgacttcac gcgtggcgcg cggcagttcg
     6061 gtcggatcct gccatacggt gatggcgtgc aggtcgacaa cgcagtagat gcagtcatag
     6121 cgctcctgca gcgccacgaa cctggtgatg gcgccaagat agtttccgag atgcaggttt
     6181 ccggtcggct gaacgccgga gaaaacgcgt tccttgaacg ccatcgtcct tcctcttcga
     6241 tttagcgcgg agccatgcca cgccggaggc gcgcgaggca aggcccttgt cagcgggcgc
     6301 gcattcctgc cagcaattcc cgaagcgttg caattccaag cgcgcgcaag gcgatggcgt
     6361 agatggcaac gccaagagtc acaaggacgg tcaacatgac gaggcgaccg gtggtggacg
     6421 atcctgccgt cgggaagacc tcgtgggcga ccacggcgcc caatagaacg gctgtcccca
     6481 tgatcgcggt tgcgatcgca atgcgaggca atcgccgccg tgcgtcctca tcaagccgca
     6541 gccagcggcg tcgaaagaga atgctgccca gcacggcggc tccgacccag ccggaagccg
     6601 cgaaggccgc ggcgagaccg atatggccgt agtgcggaaa aagcagcatc cctccgacaa
     6661 tcgcggcggc aagcccacac agcgcggctg ccattggcgt ttgcgtatcc tcatgcgcaa
     6721 acgagacggc gccgaatgtc ttttccagca cgtggcccgg caatccggca ctgatcgcgg
     6781 ccagcgcgcc cgcaactgcc gcagtatcct ggggaccgaa agctccacgc tcgaacaggc
     6841 cgccggtgat gggattggcg agcagcacaa accccgcagc cgcgggcaac gccaggccga
     6901 gggcgatctc ataggcgcgc gactgggctg ttgccagcgc atgatcgtcc ccggctatga
     6961 cgccggacgc gatgcgcggc acgacaaccg cggctatcgc gacggagacg acaccgagcg
     7021 gcaattcata aagccggttg gcgtaataga gccatgaaac tgctgcgggg gaagcggatg
     7081 cgatcgcggt tattgctata agctttagtt gcggcacgcc ggcggcgatc aggccgggaa
     7141 aggcgcgctt gaaaaaagct tccgtctgat cgggcgcatg cgtgtgcgcg cgatgccacc
     7201 gattgccggt cgacaaccag acgacgctgg tcaacacaag ctggagcagg ccggcgacgc
     7261 tgacagccaa ggccagccag gcggtgacat agaacggatc aacgtcgccg cgcgggagca
     7321 cgccaagagc cagtaccatc accaggttga acatcaccgt gctgatgacg acggcgcgga
     7381 cccggccctc ggcgttaagt gccgccgcga taacggccac caaccccgcc agaacaatgt
     7441 aaggtgtcgc caggaacagc agaaaggctg cgagcgatcg ccgcccccga tcgaatcccg
     7501 gagcgatcac ggtgatgatc gtgggcgcaa agaaaatcac gagcagggcg ataaagccga
     7561 cgatgcagaa catcaccagc aggacgcgct gcgtgaagcg cgcagcgttg gctggcccat
     7621 cgtcgccgcc gcgcagcttg agccaaatcg gcacgaaggc gccattgagc gccccttccg
     7681 acaacaggcg ccggaaaaaa ttcacgattt gcaggacgac gaacaaagcc tcggaatggg
     7741 cgccagcgcc gagcagcgcg gcgatccagg cgtcgcgcag gtaggccagc aggcgcgaga
     7801 tcagcgtgcc gctgccgacg gtcgtgatgt cacgcgcgag ggacatggac gaatccttgc
     7861 atgcactcta agcctgtggg cgatggcccg tcatcctgcg atcgctcacg cttgccgcgg
     7921 cccattcccc cgatatagtg cgcgcgccct tcacgaggac agacatgacg aacctgcgtt
     7981 acgacgtgct cggcatcggc aatgccatcg tcgacgtgat cgcccgcgcc gaagacgatt
     8041 ttctcgtcga acatggcatg cacaagggca gcatggcctt gatcgacgaa gcgcgcgccc
     8101 aggctatcta cgcagccatg ggtccggccg tcgaaagctc gggcgggtcg gcggcgaata
     8161 caatcgtcgg cgtggccagc ttcggcgcgc gcgcaagctt tatcggcaag gtcagggatg
     8221 atgatctggg ccgcatcttc gcccacgata ttcgcgcggc caatgttgcc tttgagacgg
     8281 agccggccat cagcggccct tcgacggcgc gcagttacat catggtcacg cccgacggcg
     8341 agcgcaccat gaacacgttc ctgggcgccg cgcaggattt gaccactgcg gatatagacg
     8401 aggcacgggt ggcaagcgct gctatcacct atctcgaagg ctatttatgg gatccgccgc
     8461 aagccaagga agccttcgta aaagcagcgg aaatcgctca caagaataaa cgtcgcgttg
     8521 cgcttacatt gtccgatgct ttttgcgtgg atcgatatcg gactgaattt ctcgatctga
     8581 ttcgcaaagg caccgtcgac attattttcg ccaacgagcg tgagctgcac agcctttacg
     8641 agaccgctga cttcgccagc gcggcgaaag cactgcgcga cgatgccagg cttgccgtgg
     8701 tgacgcgcag cgaaaaaggt tgtgtcgtgg tgacgggtga ctctgtcgag ccggtggctg
     8761 cggagccggt cgacaagatc gtggatgtaa ccggcgccgg ggacctcttc gccgcaggtt
     8821 ttctggtggg cctgtcgcgc ggtaaagatt accgcacctc cgcgcgcctc ggggcgcttg
     8881 ctgcggcgga agtcattcag cacgtcggag cgcgtccggc cgtatctttg aaagccctcg
     8941 cagccaaaaa cggcttgtcg atatagatac ggccttcact ctattggatg aaaatttgcg
     9001 ccggcgagca ggcaacgcgt tcgcgaagca tgctgcgaca agtattcagg tatgcgcagg
     9061 gatttcagcg cgatcgacga gcagtgcatc tctcaggatc ggtaaccaat tggtaaccca
     9121 tcgtagttac cgattggtga acgaccaatc caaggaatgt agaactatgg acaagcgtaa
     9181 ggctgcaacc gatggcgaag cggtcgcgca accggacaac gcatccgggc aaccgcagcc
     9241 caacattgaa ctgcctgccg tcgaatcgcc atcgatctcg cctgcagaca tgatcggcac
     9301 gacgaattcg gcgggggagg cgtcgccgat cgagtcgacc gacgcgctca atgcctcgaa
     9361 tgaaaccgcg gcaatgggaa cgcaaggata tgcaaggatc ggacacctca ctgcaccgaa
     9421 gcgtccccgc ctcattctgc gcccgcggca caggcgctac gcggtgctcg ccgcatcggt
     9481 ggcaatcgcg gcggcattg
//
LOCUS       DATDHO010000468         3960 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_319022, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000468 DATDHO010000000
VERSION     DATDHO010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3960
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319022"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1246
                     /locus_tag="VIY07_09020"
     CDS             <1..1246
                     /locus_tag="VIY07_09020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6381929.1"
                     /translation="ERIKERIEKAVADGALSEARVRVDRFNFGPPVGFPVQFRVIGPD
                     AKKVRDIAYQVREVMRANNQVIDPHLDWNEQAPYLKLVVDQDRVRALGMTPQDISKSL
                     GMLLSGVKITTVRDGIEKVEVVGRAVPSERLDLAHIGDLSLYSRNGIAVPLSQIAKVE
                     YAHEEPILWRINRDMAMTVRADVVDGVQPPDVTNAIWPKLQPIRDRLEPGYRIEIGGA
                     IEESEKGNASIYVLFPVMIGVMLTLLMIQLQSMSRLVLVFLTAPLGMIGASLSLNLAG
                     KPFGFVALLGLIALAGMIMRNAVILVDQIESDVKQGLTRGEAIVEATVRRARPVVLTA
                     LAAILAMIPLSRSAFWGPMAITIMGGLFVATFLTLLFLPSLYALWYRKRLDERCDEAG
                     ELSGASQREQGSGGIPVAVAAE"
     gene            1269..1877
                     /locus_tag="VIY07_09025"
     CDS             1269..1877
                     /locus_tag="VIY07_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY6381930.1"
                     /translation="MSYVTEHVETDVRERVLVVAERLFREIGYQKTTVADIAKALQMS
                     PANVYRFFDSKKSINAGVARKLMGQVEQASQAIATSRGSAAGRLRKLLTTVHQMNSAR
                     YVGDSKMHEMVACAMEENWDVCRAHIEFITSLMANVIASGVASGEFHVRDPAAAALCT
                     CTAMVRFFHPQLIAESANKPGPTLDQMIDFVIAGLGGADLTQ"
     gene            complement(2111..2527)
                     /locus_tag="VIY07_09030"
     CDS             complement(2111..2527)
                     /locus_tag="VIY07_09030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381931.1"
                     /translation="MPKTAKITRECRGEAVSDASFLGRPSDRAVSLPELLSNRNPRRP
                     AQSPTKIQIDAQRHANQHEQKKAVRQLQWVGGPGKSLDDFRNPIAFPDNKQQASNQDK
                     NQPPVVTSFIDNNGPVIFSDPTAALRIKVMMPFESQ"
     gene            2564..3448
                     /locus_tag="VIY07_09035"
     CDS             2564..3448
                     /locus_tag="VIY07_09035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY6381932.1"
                     /translation="MQLFTTAEAAAYLRLKERKIYEMVAEGTVPCTKITGRWLFPKAE
                     LDHWLAASVSRPAGTTRPEPSPIVSGSHDPLLEWSLRESGSGLATLAVGSEAGFSRFA
                     AGETLAAAIHLHVLDDVKADANVDAVKSRGGLQDAVMIAFCRREQGLLVAPGNQLNLA
                     SIKDVSRTRARLAMRPKGAGAQLLLLALMHRAKISLDQLVSVDPACPTGPDIAQAIRA
                     RRADTGIATRGVANAAGLDFVPIVWEPFDLVMRQRDYFQPPMQSLVNFMHSEAFRTRA
                     RELGGYDLSVAGTVRFVN"
     gene            3448..3828
                     /locus_tag="VIY07_09040"
     CDS             3448..3828
                     /locus_tag="VIY07_09040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEY6381933.1"
                     /translation="MTDTQVWPTELRLHKDRKTLTVTFDGGEKFDLPSEYLRVKSPSA
                     EVQGHSAEERKTVPGKRDVEIIEVLPVGNYAVRLVFDDLHSTGIFDWTYLLDLGRNHT
                     AYWQDYLDELAAKNLTRDPPARRK"
     gene            3844..>3960
                     /locus_tag="VIY07_09045"
     CDS             3844..>3960
                     /locus_tag="VIY07_09045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY6381934.1"
                     /translation="MLTLRQIEVIRAIMVTGTVGGAARLLNVSSPGVSRVMKH"
BASE COUNT          765 a         1097 c         1238 g          860 t
ORIGIN      
        1 tgaacggatc aaggagcgga tcgagaaagc cgttgccgac ggcgcgctgt cggaagcgcg
       61 cgtgcgtgtt gaccggttca actttgggcc gccggttggt tttccggtcc agttccgcgt
      121 gatcggccct gatgcgaaga aagtccgcga cattgcctac caggtccgtg aggtcatgcg
      181 cgccaacaac caggtaatcg acccgcatct cgactggaac gagcaggcgc cgtatctgaa
      241 gcttgttgtc gaccaggacc gcgtccgcgc cttgggaatg acgccccagg acatttcgaa
      301 gtcgctgggc atgctgcttt cgggcgtgaa aatcaccacg gtccgcgacg gcatcgagaa
      361 agtcgaagtc gtgggccggg ccgttccttc ggagcggctc gatctggccc acattggcga
      421 cctgtcgctc tattcgcgca atggaatcgc ggttccgctc tcgcagatcg cgaaagtcga
      481 gtatgcgcac gaggaaccga tcctctggcg aatcaaccgt gacatggcga tgaccgtgcg
      541 tgccgacgtt gtcgacgggg tgcagccgcc tgacgtcacc aacgccatct ggccgaagct
      601 gcaaccgatt cgcgaccgcc tcgaaccggg ctatcgaatc gagatcggcg gcgctatcga
      661 ggagtcggag aagggcaatg cgtccatcta cgtgctgttc cccgtgatga tcggcgtcat
      721 gctcacgctg ctgatgatcc agctgcaaag catgtcccgg ctggtgcttg tcttcctcac
      781 ggcgcctctt ggaatgatcg gagcgtcgtt gagcctgaac cttgcaggca agccattcgg
      841 ctttgtcgca ctgctcggtc tgatcgcgct tgccggcatg atcatgcgca atgcggtcat
      901 cttggttgac cagatcgaat cggacgtgaa acagggattg acgcggggcg aggcgatcgt
      961 cgaagcaacc gtcaggcggg cgcgtcccgt tgtccttacg gccttggccg ccattctcgc
     1021 aatgattcca ttgtcgcgct cggctttttg gggaccaatg gcgatcacga tcatgggcgg
     1081 cctgtttgtt gcaacatttt tgactctgct gttcctgccc agtctgtatg cgttgtggta
     1141 tcgtaagcgg cttgacgagc gctgcgacga ggcgggcgag ctttcaggcg cgtcgcaacg
     1201 cgagcagggg tctggcggga ttccagttgc ggttgccgcc gagtgagagg gaaaggctgg
     1261 gacttcaaat gagctacgta actgaacatg tcgaaacaga tgttcgggag cgggttctcg
     1321 ttgttgccga acgtttgttt cgcgaaatcg ggtaccagaa gacgaccgtg gcggacattg
     1381 ccaaggctct tcagatgagc ccggccaatg tttatcgctt tttcgattct aagaaatcga
     1441 tcaacgctgg cgtcgcgcga aagctgatgg ggcaggtcga gcaggcatcg caggctattg
     1501 ccacgagccg gggaagcgcc gcgggccggc tgcgcaagtt gctgacaacc gtgcatcaaa
     1561 tgaattcagc ccgctatgtc ggcgactcca aaatgcacga aatggtcgcc tgcgcgatgg
     1621 aagaaaattg ggatgtttgc cgggcgcata tagaatttat cacgagcttg atggcgaatg
     1681 taatcgcgtc cggtgttgcc agcggcgaat tccatgtgcg tgaccccgcc gccgccgccc
     1741 tgtgcacctg tactgcgatg gttcggtttt tccatccgca attgattgcc gaatcggcga
     1801 acaagccggg gccgacgctc gatcaaatga tcgactttgt gattgcgggc ctgggcggcg
     1861 ctgatttgac gcagtagtct ggctgctgcc ggcttgcgtc ggtagacaaa gtgccggaac
     1921 acttgtggac gagggctacg tttcggcgca aagatcgaaa cgaagcgtta atctcgctga
     1981 taccgcgatg ctgcagatcg gaattgtgct tagctgggtg gtcgctttgg gcttggtggt
     2041 ttttctcgcc accgagtcgc tgcggcatcg acgatggggc cggcaaagga gaaagcgggc
     2101 acgtcgcaga ctattgagat tcaaaaggca tcatcacttt gatccgaagc gcggccgttg
     2161 gatccgaaaa gatgacgggt ccgttgttgt cgatgaagct ggtgacgacc ggcggctggt
     2221 tcttatcctg gttggatgct tgctgcttat tgtctgggaa ggctattgga tttcggaaat
     2281 cgtcgagcga ttttccaggg ccacccaccc attgcaactg ccgtacggct ttcttttgct
     2341 catgttggtt ggcgtgccgc tgggcgtcta tctgtatctt cgtcggagat tgcgccggtc
     2401 ggcgcggatt ccgatttgaa agcagttccg gtagagaaac agctcggtcg gacggccgcc
     2461 ctaaaaagga cgcgtcgctg acggcctctc cacggcactc ccttgttatt tttgctgttt
     2521 taggcatcct caaaaagggt gcatgtgggt gcaggtcgac gccgtgcagt tatttaccac
     2581 cgccgaggca gccgcctatc tccgcctcaa ggagcggaag atctatgaaa tggtggccga
     2641 gggaacagtc ccttgcacga aaatcactgg ccgctggcta tttccaaaag ccgaactcga
     2701 ccactggctc gccgccagcg tttcgcggcc ggcgggaacg acgcgacccg agccgtcgcc
     2761 gatcgtcagc ggaagtcatg acccgctgct tgaatggtcg ctgcgcgaga gcggctcggg
     2821 tctggcgacg ttggcggttg gcagcgaggc aggattttct cgtttcgccg ccggtgagac
     2881 gcttgccgcc gcaatccatc tccacgtcct cgacgatgta aaagccgacg caaacgtcga
     2941 cgctgtgaaa agccgcggcg gattgcaaga tgcggtgatg atcgcctttt gtcggcgcga
     3001 acaaggcttg ctcgttgcgc caggaaatca gttgaatctt gcttccatta aagacgtaag
     3061 caggacacgt gcgcgtctgg ctatgcggcc gaagggcgcc ggcgcgcaat tgctgctgtt
     3121 ggccttgatg caccgggcca agatctcact cgatcaactc gtctcggtgg atcctgcctg
     3181 cccgacaggc cctgatatcg cgcaggcaat tcgcgccaga cgtgccgata cgggaatcgc
     3241 gacgcgcgga gttgccaatg ctgcgggtct tgatttcgtg cccatcgttt gggagccgtt
     3301 cgatctggtc atgcgccagc gcgactattt ccagccgccg atgcaatccc tggtcaactt
     3361 catgcattcg gaagcgttca gaacgcgcgc tcgcgagctg ggcggttacg acctcagcgt
     3421 tgcaggcaca gtacggtttg taaattgatg accgacacgc aggtttggcc gacggaattg
     3481 cgcctgcaca aggatcgcaa gaccttgacg gttacattcg atggaggtga gaagttcgat
     3541 ctgccttccg aatatctgcg cgtgaaaagc ccaagcgccg aagtgcaagg gcattcggcc
     3601 gaggaacgga agacggtgcc cggaaagcgt gatgtcgaga tcatcgaggt gttgcccgtc
     3661 ggcaattacg cggtccggct cgtgttcgac gatcttcatt cgaccggaat cttcgattgg
     3721 acctatctcc tcgatctcgg gcgcaatcat accgcctatt ggcaggatta cctcgacgag
     3781 ctcgcggcta aaaatctgac tcgcgatccg ccggctcggc gcaaataaag gggccgggcg
     3841 ctcatgctca cgctgcgcca aatcgaagtg attcgcgcga tcatggtgac cggcaccgtt
     3901 ggcggtgccg ccaggctcct gaatgtttcg tcacccggcg tcagtcgcgt gatgaaacac
//
LOCUS       DATDHO010000469         1849 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_22252, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000469 DATDHO010000000
VERSION     DATDHO010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1849)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1849)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1849
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22252"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1000)
                     /locus_tag="VIY07_09050"
     CDS             complement(<1..1000)
                     /locus_tag="VIY07_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6381935.1"
                     /translation="MTDRSFLKWPFLESRHREVAERLETWAAANLPETDDGDVDEACR
                     KLVSVLGRDGWLKFTAPGPGDNERIDVRTLALIRETLARHSGLADFAFAMQGLGAGPI
                     SLFGSLEQRNAWLPRTRAGKAIAAFALSEPDSGSDVANIVTMARRDGNGFILNGEKTW
                     ISNGGIADFYVVFARTGEAPGARGLSAFIVEADNPGLEIAERLHVIAPHPLARLRFDR
                     CRVAPSALIGDAGEGFKIAMTTLDVFRTTVGAAALGFARRALDETLRRAAGRHLFGAP
                     LAELQMVQGHIADMALEIDAAALLVYRAAWTKDMGAARVTREAAMAKLFATEAAQRV"
     gene            complement(1004..1807)
                     /locus_tag="VIY07_09055"
     CDS             complement(1004..1807)
                     /locus_tag="VIY07_09055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019962587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase family protein"
                     /protein_id="HEY6381936.1"
                     /translation="MKDFKPVHFNWRAEGDVALITLKGSERKNPITFDSYAELRDTFR
                     KLPAADDIKAVVFGSNEGNFCSGGDVRDIIGPLLDRNTKGLLEFTRMTGDLVKAMRAC
                     PQPIVAAVDGVCVGAGAMIALFCDMRLGTPQAKTAFLFTRVGLAGCDMGACAMLPRVI
                     GQGRASELLFTGRTMSAEEGAQWGFFNRLVASDKLQEEALALAQKIAQGPTFAHMMTK
                     TMLGQEWSMSLEQAIEAEAQAQAICMQTGDFRRAYEAFIAKGSPRFAGN"
BASE COUNT          350 a          608 c          551 g          340 t
ORIGIN      
        1 tcacgcgctg tgcggcttcg gtcgcgaaca gcttggccat ggcagcctcg cgggtgacac
       61 gcgcggctcc catgtccttg gtccaggcgg cgcgatagac cagcagcgct gcggcatcga
      121 tctcaagcgc catgtcggcg atatgcccct gcaccatctg cagctcggca aggggcgcac
      181 cgaacaaatg gcggccggcg gcacgccgga gcgtttcgtc caacgcgcgg cgggcgaagc
      241 cgagcgcagc cgcgcccaca gtcgtgcgaa agacatcaag cgtcgtcatg gcgatcttga
      301 agccctcacc tgcatcgccg ataagcgcag aaggtgccac gcggcaccta tcgaagcgca
      361 gccgcgccag cggatgtggc gctataacgt gcagtcgctc ggcgatttcc aagccgggat
      421 tatcagcttc aacgatgaag gcggatagcc cccgcgctcc cggtgcttcc ccggttcgtg
      481 caaaaacaac atagaagtcg gcaatgccgc cgttcgaaat ccaggtcttt tcgccgttta
      541 ggatgaagcc atttccgtcg cggcgggcca tagtgacgat attggcgacg tccgagccgg
      601 agtcgggctc cgacagcgca aaggcggcga tcgccttgcc tgcacgcgtt ctcggaagcc
      661 atgcgttccg ctgctcgaga cttccaaaca atgaaatcgg cccggctccc agcccctgca
      721 tggcaaaggc gaaatcggcg aggccggaat ggcgcgccag tgtctcgcgg atcagcgcca
      781 gcgtgcgcac atcgatgcgt tcgttatcgc ctggccccgg ggcggtgaat ttcagccaac
      841 cgtcccgacc gagaacactc acaagcttcc ggcatgcttc atcgacatcg ccatcatcgg
      901 tttcggggag attggcggct gcccacgttt ccagccgttc cgccacctcg cgatggcggg
      961 actcaagaaa cggccatttt agaaagctcc tgtccgtcat cggtcagttt ccggcaaagc
     1021 gtggactgcc tttcgcgatg aaagcctcgt aggcacgtcg gaaatcgccg gtctgcatgc
     1081 aaatcgcttg cgcctgcgcc tccgcttcaa tcgcctgctc gagcgacatg gaccattcct
     1141 ggccgagcat tgtcttggtc atcatgtgcg caaaagtcgg gccctgcgcg attttctgcg
     1201 caagggcgag cgcttcttcc tgcagcttgt cggaagcgac cagcctgttg aagaagcccc
     1261 attgtgcccc ctcctccgcg ctcatggtgc ggccagtgaa gagcagttcc gaagctcggc
     1321 cctgcccgat gacacgcggc aacatggcgc acgcgcccat gtcgcagccc gcaaggccaa
     1381 cgcgcgtgaa aaggaatgcg gttttcgcct gcggcgtgcc gagccgcatg tcgcagaaca
     1441 acgcaatcat cgcgccggcg cccacacaga cgccatcaac cgccgcgacg atcggctgcg
     1501 gacaagcgcg catggccttc acgagatcgc ccgtcatgcg cgtgaactcg agcagcccct
     1561 tcgtgttgcg gtcgagcagc ggtccgatga tgtcgcgcac atcgccaccc gagcagaaat
     1621 ttccctcgtt ggagccgaag acgaccgcct tgatatcatc ggcagctggc agcttgcgga
     1681 acgtgtcgcg caattcggcg taggaatcga atgttatcgg gttcttgcgt tcgctgccct
     1741 tgagcgtgat cagcgccacg tcgccttcgg cgcgccaatt gaaatgcacc ggcttgaaat
     1801 ctttcatatt catggccggg tctccccgct gcggacgctt ctcacaagc
//
LOCUS       DATDHO010000470         2532 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_368588, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000470 DATDHO010000000
VERSION     DATDHO010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2532)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2532)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2532
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368588"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..909)
                     /locus_tag="VIY07_09060"
     CDS             complement(<1..909)
                     /locus_tag="VIY07_09060"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEY6381937.1"
                     /translation="MLDFTADLSPPAPIPKEHALGPIALLRVLASNPLEAWTAAHFEE
                     PIVTTGLSIGRVAVVNEPAAIRRVLMTNTENYQKDWLQRRVLSAALANGLLTVESDQW
                     KLQRRALAPLFSRKTVLSFTAAMIEAAEALIDRLHQREDQIVDFSDESTRITVDVLER
                     TIFSDGFGRDPNDVRTAMSAYFETVGRIDPFDILGLPSVVPRPTRMKLKPTLRFFEKT
                     VDDIIAMRQRRLAADPTNAPPDILTLLLEARDPETGAALSDIEIRANILTFISAGQET
                     TANCITWTMYLLSQSGEWRERVRAEVD"
     gene            1112..1708
                     /locus_tag="VIY07_09065"
     CDS             1112..1708
                     /locus_tag="VIY07_09065"
                     /inference="COORDINATES: protein motif:HMM:NF021438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HEY6381938.1"
                     /translation="MSPKTVHLSAFCGALWLMAGSIASAQPGRTPTDPTGEWLVAKQY
                     ARIKIADCDGRLWGIVAWEAQPGGIDKKNPDPNLRTRPKLGMPILLGMAPTKPNQWDG
                     KIYNSEDGNTYSASISLVDPNTLRVQGCFLGFLCGGENWTRVDSHDPPTTASTQRTPA
                     KPSTSGSRRTASAQPDSHDDVCSKTPASTGFSHERGLK"
     gene            complement(1658..>2532)
                     /locus_tag="VIY07_09070"
     CDS             complement(1658..>2532)
                     /locus_tag="VIY07_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEY6381939.1"
                     /translation="ENIAALNGMADQLKKMAGNAIGPGADAARRLAENLLKLAQADQQ
                     TRARATRVFIVPYETDTAQLREFLKAEKIAQDNLPQSLKRKWMTSDGRARVEVAPSGD
                     TDDTEVLRTFARAILAVYPNATGGPISILESSRTVIRAFFEAGFYALVSIAILLWVVL
                     RRFGDVLLTLVPLILAGVVTLEICVLIGMPLNFANIIALPLLLGVGVAFKIYYIMAWR
                     SGRTNLLQSSLTRAVIWSALTTATAFGSLWLSQHPGTSSMGKLLALSLVCTLAAAVLF
                     QPALMGKPRRSRRL"
BASE COUNT          586 a          727 c          712 g          507 t
ORIGIN      
        1 gtccacctcg gccctgactc gctcccgcca ttcgcccgat tgcgagagca aatacatagt
       61 ccaggtaatg caattggctg tcgtttcctg accggccgaa atgaaggtta gaatgttcgc
      121 gcgaatctca atgtcgctaa gcgcagcccc ggtctccgga tcgcgcgcct cgagcaacag
      181 cgtgagaata tcgggtggag cgttggtggg atccgctgcg agccgccgct gacgcatcgc
      241 gataatgtcg tcgacagttt tctcgaagaa cctaagcgtc ggcttcaact tcatgcgtgt
      301 tggccgtggc acgaccgatg gcagacctag aatatcgaat ggatcgatgc gcccaactgt
      361 ctcgaaatac gccgacatcg cggtgcgcac gtcattcgga tcgcgcccga agccgtccga
      421 aaaaattgtg cgctccagca cgtccaccgt aatgcgcgtc gattcgtccg agaagtctac
      481 gatctgatct tcacgttgat gaaggcgatc gatgagcgcc tcggcggctt cgatcatcgc
      541 agccgtgaag gacaacacgg ttttgcgcga aaagagtggc gccagcgcac ggcgctggag
      601 cttccactga tcgctttcca cagtcagcaa cccgtttgcc agagctgcag aaagtacgcg
      661 ccgctgcaac caatccttct gatagttctc cgtattcgtc atcagcaccc gccggatggc
      721 ggccggctca ttgactaccg caacgcggcc tatcgacaat cctgtcgtta cgatcggttc
      781 ctcgaaatgg gctgcggtcc acgcttcgag ggggttgctg gcaaggaccc gaagcaacgc
      841 aatcggtccg agggcgtgct ctttggggat gggtgccggc gggctgagat ccgctgtaaa
      901 atcgagcaat aaattactcc gaataacgac gaagcgaacg aataccgtca atggaacact
      961 gtggcccaac ggcctaccga ccgtaggagt tccattatgc tgcaatttga ctagtctgaa
     1021 agcgggaacc gggcgtcatt tcgtctattt tccgatgttg agttgtggcc gaccgagggg
     1081 atttggggtt gcatccgagg tgtaaatccg aatgagccca aaaacagtcc atctttcagc
     1141 tttttgcggc gcgctctggc tgatggccgg cagcatcgca tctgcgcaac ctggtcggac
     1201 gcccaccgac ccgacaggtg aatggctggt cgccaagcaa tatgcccgca tcaagatcgc
     1261 cgactgcgat ggccgcttgt gggggatcgt cgcatgggaa gcgcagccgg gtggcatcga
     1321 caagaaaaac ccggatccca atctgagaac ccgtcccaag ctgggaatgc caatcctgct
     1381 cgggatggcg ccgaccaaac cgaaccaatg ggatggaaaa atctataatt cggaagacgg
     1441 caacacttat tccgccagta tcagcctggt tgatccaaat actctgcgcg tccagggttg
     1501 cttcctgggc tttttgtgcg gcggcgaaaa ttggacgcgc gtcgattcac acgatccgcc
     1561 tacaactgcc tcgacgcaac gcacccctgc aaagccatcc acctccggca gtcggagaac
     1621 ggcaagcgca cagccggact cgcacgatga tgtttgctca aagacgccgg cttcgacggg
     1681 gttttcccat gagcgcgggc tgaaatagaa ccgcagccgc caaagtacag acgagggaca
     1741 atgccagcaa tttgcccatg ctggatgtgc ccggatgttg cgaaagccac aggcttccga
     1801 acgcggttgc tgttgtcaac gcgctccaaa ttaccgcgcg agtaagactc gactgcaaga
     1861 gattggttcg gccggagcgc caggccatga tgtaataaat tttgaaagca acacccacgc
     1921 ctagaagcaa cggcagcgcg atgatatttg cgaaattcaa cggcatgccg atcagtacac
     1981 aaatttcaag tgtcaccacg cccgccaata tgaggggcac gagagtcagc aaaacatcgc
     2041 caaagcggcg caacacgacc caaagcagaa tggcaatcga aacgagcgca taaaatcccg
     2101 cctcgaaaaa tgccctgata acggtacgac tggattcaag gattgaaatt gggccgccgg
     2161 tggcgttggg atagacggca agaatggccc gcgcaaaggt gcggagcacc tcggtatcgt
     2221 cggtgtcgcc ggatggcgcg acttcgacac gtgcgcgacc atcagaagtc atccacttcc
     2281 gtttcagcga ctgcggcaga ttgtcttggg caatcttttc ggccttcaga aattctctca
     2341 attgagcggt atcggtttcg taaggcacaa tgaacactcg tgtagcgcgt gcccgcgtct
     2401 gctgatcagc ttgcgccagt ttcagcaggt tttccgccaa acgccgcgcc gcatcggctc
     2461 cggggcctat ggcgttcccg gccatctttt taagctgatc agccatgccg ttaagcgcag
     2521 caatattttc ag
//
LOCUS       DATDHO010000471         3800 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_464813, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000471 DATDHO010000000
VERSION     DATDHO010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3800
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_464813"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..872)
                     /locus_tag="VIY07_09075"
     CDS             complement(<1..872)
                     /locus_tag="VIY07_09075"
                     /inference="COORDINATES: protein motif:HMM:NF017078.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHASE4 domain-containing protein"
                     /protein_id="HEY6381940.1"
                     /translation="MPAVARPHTSDARQYTSWDRARLSVVVPIGVIVAIAIVCIVVAV
                     LSSAQRADVVAVDHEKQLFSRALSNYGERVLREVESVASSDGAIQHVRRSFDAEWAKQ
                     RVGTWLATYFDHDYVFILGPGDELISSTVGHQFADMKWFATARPGLASVINHMRGRDP
                     SLTTAIRLDRMAQADNAAHRQIAVIRRLIGRPAVIAAAEVGPTDGIQATNNNAAPVIV
                     SVKFIDDEVLTGIAAQLRLTNLRNAERDPIAAHDLAYELTAPDGNTIGRFAWAPKKPG
                     AEIVQNVVPFIAVA"
     gene            complement(1107..1853)
                     /locus_tag="VIY07_09080"
     CDS             complement(1107..1853)
                     /locus_tag="VIY07_09080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HEY6381941.1"
                     /translation="MTYCCGILVQEGLVMVADTRTNAGLDNISTFRKLHVYTQPGERI
                     MALASSGNLSLSQSVRSTLTEGVQNPETGEIETLMNSPTMFQAAQRIGRIVRQIQTAE
                     GKALAAAEVDHEVAFLFGGQIKGGRVQLFMIYSAGNFIECTTDTPYLQIGEHKYGKPV
                     LDRAISFNTDLYDALKIGLISMDSTMRSNLGVGLPIDILVVRRDSCTSEVSYRIEPGE
                     PYFQDLRERWSAALRAAHISIPRPPYHSSN"
     gene            complement(1989..2816)
                     /locus_tag="VIY07_09085"
     CDS             complement(1989..2816)
                     /locus_tag="VIY07_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEY6381942.1"
                     /translation="MRIRISHSTTYAYEMPPTGVTQLLRKTPRDHDGQHVLAWRIDIS
                     EDCLLHQHEDAFGNITHYFTADGPLTKLTVEVDGEVDTQDTDGVVRGAIERFPPQLYL
                     RETPLTQTDPAIVEFAQTTRAAGDRDSLILLHDLMVALNREIAFDTDPTHAATTAAQA
                     FTLRRGVCQDITHIFVAAARALGVPARYIGGHFHRADGVTTQEAGHAWAEAYVENLGW
                     VGFDPTNGICTTESHVRVAVGLDYLGAAPVRGTRFGGGGETLAVAVRVDQARRQAQT"
     gene            complement(2939..>3800)
                     /locus_tag="VIY07_09090"
     CDS             complement(2939..>3800)
                     /locus_tag="VIY07_09090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HEY6381943.1"
                     /translation="ATQRLSALPLGYVGTSNEWESAVATAGCATAFFKLYDEANEANV
                     TDFLAFSPDNSSSIRACFELARSNARAVRTALTMEMWDAINGTWLELKRYGNGPTSRE
                     EFSRFLRWVQESSLRFDGSAYRTMLRNDAYWFSRLGVYIERADNTARILDVKYHLLLP
                     ENERVGGPLDYFQWAAILRSVSALTAYHWVYRESLQPWLVADLLILRDEMPRSLSSCY
                     EAIVRNLDSIAGAYGRQGPAQRQARGIRTRLQNSRMDGIFQRGLHEFIGEFIVENNKL
                     GALVTEQFLT"
BASE COUNT          790 a         1103 c         1155 g          752 t
ORIGIN      
        1 aaggcaacgg cgatgaacgg cacgacattt tgcacgattt cggcgccggg ctttttcggt
       61 gcccaggcaa accgaccgat ggtgttgccg tccggcgcag tgagctcata agccagatcg
      121 tgtgccgcaa tcggatcccg ctcggcgttg cgaagattgg tcaaccgcaa ttgcgcagca
      181 atgcccgtga gcacctcatc atcgatgaat tttaccgaca cgatgacggg agcggcgtta
      241 ttgttcgtgg cctgaattcc atcggtaggt ccgacctccg ccgcggcaat cactgccggg
      301 cggcctatca gacggcgaat gacggcgatc tgtcgatgcg ccgcgttgtc cgcctgtgcc
      361 atgcgatcga gacggatcgc ggtcgtcagg cttggatcgc ggccgcgcat atggttgatc
      421 accgacgcca gccccgggcg ggcggttgca aaccacttca tgtcggcgaa ctgatgcccg
      481 accgtcgaag agatcagttc atcgcctggt ccaagaatga aaacgtagtc gtggtcgaaa
      541 tacgtagcca accaagttcc aacgcgttgc ttggcccatt cggcatcgaa cgagcgtcgg
      601 acgtgctgga ttgcgccgtc ggatgaggcg acgctttcca cctcgcgcaa cactcgttcg
      661 ccatagttgc tgagcgcacg cgagaacaat tgcttttcgt gatccaccgc aaccacatcg
      721 gcgcgctggg cggatgacag cacggcgacg acaatgcaaa caattgcaat cgcaacaatg
      781 acgccgatgg gcacgactac gctcagacga gcgcggtccc aactcgtgta ttgccgcgcg
      841 tcggaagtgt gcggacgagc aacagccggc acggtgaaag tcccttaaag cgtcctgccg
      901 attagtcttt tcgcggccgg aacctaggca ataaagcttg ctattcactt gcgtttgtcg
      961 aaaagccgcc attctttgcc gccggaacat gcaattcgcc cggttctgtt aactgccggt
     1021 aaaacgatag acggtgcagc ccgagcgcaa attaattaat tggaaagagc gaatttgtcc
     1081 gagcagctta gcaaacgtcg tatggctcag ttggagctgt ggtagggcgg ccggggaatc
     1141 gagatgtgtg cagcgcggag cgcggccgac caacgttcgc gcaggtcctg gaaatagggt
     1201 tcgcctggct cgatgcggta actcacttcg gacgtgcacg agtctctgcg cacgaccagg
     1261 atgtcaatcg gcaacccgac cccgagattg gagcgcatcg tcgaatccat cgagatcagg
     1321 ccgatcttca gggcgtcgta aagatcggtg ttgaaactta tcgcccgatc gagcacgggt
     1381 ttgccgtatt tgtgttcgcc gatctgcaga tacggcgtgt cggtcgtgca ctcgatgaaa
     1441 ttgcccgccg agtaaatcat gaacaactgc acccgtccgc ctttgatctg cccgccgaac
     1501 aaaaaagcga cctcgtggtc tacttccgcc gcggccagtg ccttgccttc ggctgtctga
     1561 atttggcgga ctatacggcc gatgcgctgc gcggcctgga acattgtcgg cgaattcatc
     1621 agagtctcga tctcgccggt ctccggattc tgcacccctt ccgtcaatgt cgatcgcacc
     1681 gattggctga gcgacagatt gccggaggag gcgagagcca tgatgcgctc accgggctgc
     1741 gtatagacgt gcagcttgcg gaatgtggag atgttatcga ggcccgcatt ggtgcgcgta
     1801 tcggcgacca tgacgagacc ctcctgtaca agaattccgc agcaataggt catgggcctt
     1861 cgaggactcg tctggacacc ggcggcagat ttatagcgac ccgacgcgcg attgcgcaat
     1921 gtcggggacc agggtttcga acaaacttgt attgctcggg catgttcgcc gctatttgcg
     1981 cgctgctatc aggtctgcgc ctgccgccgt gcctggtcca ctcgtaccgc gaccgccaag
     2041 gtctccccgc cgccgccaaa ccgcgtgcca cgcaccggag cggccccaag atagtccagg
     2101 ccgaccgcaa cccggacatg ggactcggtg gtgcaaatgc cattcgtcgg gtcgaagccg
     2161 acccatccca aattctctac ataggcttca gcccaggcat gccccgcctc ctgagttgtg
     2221 acaccatcgg cgcggtgaaa gtggcccccg atgtaccgcg ccggtacacc gagagcgcgc
     2281 gccgccgcga caaagatatg ggtgatatct tggcagactc cgcgtcgaag cgtgaaagct
     2341 tgcgcggcag tggttgcggc gtgtgttgga tcggtatcga aagcaatttc acgattgagt
     2401 gcgaccatga ggtcgtgcag cagaataagg ctatcgcgat caccggccgc acgcgttgtt
     2461 tgcgcaaatt cgacgatggc aggatcggtt tgcgtcagcg gcgtttcgcg cagatagagt
     2521 tgcggtggaa agcgttcgat ggcacccctg acaaccccgt cggtgtcctg cgtatcgact
     2581 tcaccgtcga cctcgaccgt caatttcgtg agcggtccat cggccgtgaa gtaatgagtg
     2641 atgttgccga atgcgtcctc atgctggtgc agcaaacaat cttcggaaat atcgatgcgc
     2701 caggccagca cgtgctgacc gtcgtgatcg cgcggtgtct tgcgcaacag ctgcgtcacg
     2761 ccggtaggcg gcatctcgta agcataagtg gtcgagtggg agatacgaat tcgcattgac
     2821 ggcgttaagg cctttcgacg tcatcccggc ttgctggtca ttcacgcttc acaccttaaa
     2881 gacgtgggca gccgggacaa gcccggccaa gccccgccat gacgaacgag tgcaccgcct
     2941 aggtaagaaa ttgctcggtg accaacgcac cgagcttgtt gttctcgacg atgaattcgc
     3001 cgatgaactc gtgcaggccg cgctgaaaaa tgccgtccat gcggctgttt tgcagacggg
     3061 tgcgaatgcc gcgtgcctgc cgctgggccg gaccctggcg gccataggcg ccggcaattg
     3121 aatccagatt gcgcacgatc gcctcgtaac aggaagacag cgagcggggc atctcgtcgc
     3181 gcaagatcag cagatcggct accagccagg gctgcaggct ctcccgataa acccaatgat
     3241 aagcggtgag agcggacacc gagcgcaata tggcggccca ttgaaagtag tcgagcggac
     3301 cgccaacgcg ttcgttttcg ggcagcagga gatggtattt gacgtcgagg atgcgggctg
     3361 tgttgtcggc acgctcgatg tagacgccaa gccgcgaaaa ccaataagcg tcgttgcgca
     3421 gcatggtgcg gtacgccgaa ccgtcaaagc gcagcgagga ttcctgcacc cacctcagaa
     3481 agcgagagaa ctcttcgcgc gaagtcggcc cgtttccata gcgcttgagc tcaagccagg
     3541 tgccgttgat cgcgtcccac atttccatcg tcagggcggt gcgcaccgcg cgggcattgc
     3601 tgcgcgcaag ctcgaagcag gcacgaatgg acgatgaatt gtcgggtgaa aaagcgagga
     3661 aatccgtaac gtttgcctcg ttggcttcgt catacagctt gaagaaggcg gtggcgcagc
     3721 ctgcggtcgc taccgctgat tcccattcat tgctggtgcc cacatagcca aggggaaggg
     3781 ctgacaggcg ctgggtcgcg
//
LOCUS       DATDHO010000472         3390 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_418734, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000472 DATDHO010000000
VERSION     DATDHO010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3390
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_418734"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            155..709
                     /locus_tag="VIY07_09095"
     CDS             155..709
                     /locus_tag="VIY07_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEY6381944.1"
                     /translation="MSFGGCTVSSYKHFASARFCNFVRFAPIAAATIALAGCNQYTTT
                     AGNKSGLRNASRYVAPVEYAEPTVGTVRHVAVRRVRHTPFKRPVETQFASRGVASFYS
                     DEQLTANGEKFNPKALTAAHRTLPFGTRLRVTNVANGRSVTVRINDRGPYVPGRIVDV
                     SHSAAESLGIVGRGIAKVKLDVIN"
     gene            869..2287
                     /locus_tag="VIY07_09100"
     CDS             869..2287
                     /locus_tag="VIY07_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY6381945.1"
                     /translation="MRSRVIHLINPKTDSLTTRPLYLNRALYSPLAGLLAVAACIPRD
                     QYEVVLTDENIETIDFDLKADLVGISAMTSYVNRGYEIADQFRAKGIPVVMGGVHPSF
                     MPQEALKHSDAVVIGEVELVIDKLLDDLRDGQMRGTYKSCTLHPMAGLTMPRYDLLKK
                     HRYVNRTFVQTSRGCHQGCTFCAEPLMNGLRFRYRPVDEVIHEMENCGSRTISINDAD
                     FFGTPDRPKEVMRALRGRNIHWQAGVTSKLAQDDRMLELAAESGCTLLSIGFESISRS
                     TLTSVHKHVNRPETFAALVEKVHSYGIMVFGLFMYGFDGDTLSVFDDTVKFNIDAKYD
                     AVAYSTLTPYPGTLTWYEMKKANRIVSFDWTMYDQGHVVYRPAQMSGDELRIGVDRAY
                     RNFYATSSIANRFPLSGKRHRAQWIIYNLFMRRGSQTENIQSIAAPTAEPDVAPMPPI
                     LPIKREWRAAVLEAAGPGPHLN"
     gene            complement(2298..2933)
                     /gene="folE"
                     /locus_tag="VIY07_09105"
     CDS             complement(2298..2933)
                     /gene="folE"
                     /locus_tag="VIY07_09105"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEY6381946.1"
                     /translation="MSSDRRPKTSASSTERPTREAAEDAVRTLIQWAGDDPRREGLRG
                     TPGRVVRAYEEWFAGYFEDPREYLQRTFEEVADYDEMVLLRDIRFESHCEHHIAPIIG
                     RVHIGYLPRKRVVGISKLVRLVDVFAKRMQVQEKMTAEIASCLNSVLKPSGVGVVVEG
                     AHECMTTRGVHRPDVTMVTSRMLGVFRTNFKTRQEFLAAIKLRHSIDDGSL"
     gene            complement(3130..>3390)
                     /locus_tag="VIY07_09110"
     CDS             complement(3130..>3390)
                     /locus_tag="VIY07_09110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381947.1"
                     /translation="GAISSARFQGAAFVIRPLGVFACSVLFFIATAPVLAQTPSKPRS
                     PGEIATADRIAMEKRAACQREARAKTSSYLQRRRFVKECVRG"
BASE COUNT          718 a          997 c          961 g          714 t
ORIGIN      
        1 cagctgccca ctcttcccac acggccgctt gaatcgactt tgtgacaaaa caatcacacc
       61 gaaagccaaa atagagccgc gccatacttc gctttaatcc ggccacggtg ccgccccgat
      121 tgcctgtcgg attttggcaa acggggaccg cagcatgtcg tttggtggtt gtactgtgag
      181 ttcgtacaag catttcgcat ccgcgcgttt ttgtaatttt gtccgttttg ctcccatcgc
      241 cgccgcaaca atcgcgctcg cgggctgcaa tcaatacacc accaccgccg gcaacaaatc
      301 cggcttgcgc aatgcgagcc gatatgtcgc tccggtggag tacgcggaac caactgttgg
      361 caccgtcagg cacgtagcgg tgagaagggt acgacacacc ccattcaagc gaccggtcga
      421 aacgcagttt gcatcgcgcg gagtagccag cttttactct gacgaacagc tgaccgcgaa
      481 cggcgagaag ttcaatccta aggcattgac cgctgctcac cggacgctgc cgtttggcac
      541 ccgcttgcgc gtcactaatg tcgccaacgg ccggtccgtc acggttcgca tcaatgaccg
      601 aggtccgtac gtgccgggcc gcatcgtcga cgtttcacat tctgccgcag aatcgttggg
      661 aatcgtagga aggggaatag cgaaggttaa acttgacgtt atcaactagg gacggggagg
      721 cgagccgacc gcctgagcgc gctgcgggga cgcgcgctcg ggcggcgctt cgccagggaa
      781 cggtcccagc tattattcca gtggtaagga acaagtccgc tgagacatca ttaaaacggt
      841 tgtattggca ctggaaaagg agattttggt gcgttcgcgc gtcatccacc ttatcaatcc
      901 gaaaaccgat tccctcacca cacgtccgct ctatttaaac cgggcgctct actcgccact
      961 cgccggattg ctcgcggtgg cggcatgcat tccccgagac caatacgaag tggtgctgac
     1021 tgacgagaac attgagacca tcgattttga cctgaaagcg gaccttgtcg gaatctccgc
     1081 gatgacgagc tacgtcaacc gtggttacga gattgccgac cagttccgcg ccaagggcat
     1141 tcccgtggtt atgggcgggg ttcatccaag tttcatgccg caagaagcgc tcaagcattc
     1201 cgatgctgtt gtcattggcg aagtggaact cgtgatcgac aagttgctcg acgatctccg
     1261 cgacgggcaa atgcgaggaa catacaagtc ctgcacattg cacccaatgg ccggcctaac
     1321 gatgccgcgc tacgatctcc tgaagaagca tcgctacgtc aaccgcactt tcgtacagac
     1381 ttcacgcgga tgccatcaag gttgcacgtt ctgcgccgag ccgcttatga acggcctcag
     1441 attccgttac cgtcccgtcg acgaagtgat tcacgagatg gaaaactgcg gctcgcgcac
     1501 catctcgatc aacgacgccg atttttttgg cacgcctgac cgaccgaaag aggtcatgcg
     1561 cgccctgaga ggtcggaata tccattggca ggccggggtg acgtcgaagc tggcgcagga
     1621 cgaccgcatg cttgagcttg cggccgaaag cggctgcacg ctgctgagca tcggttttga
     1681 gtcaatttcc cgctccactc tcacaagcgt gcacaagcac gttaacaggc ccgaaacttt
     1741 cgccgcgctg gtcgaaaagg ttcactccta cggcatcatg gtgtttgggt tgttcatgta
     1801 cggattcgat ggcgacacgc tgtcggtgtt cgatgacacg gtcaaattca atatcgatgc
     1861 caaatacgac gccgtggctt attccactct gacgccgtac cccggcacgc tgacgtggta
     1921 cgagatgaag aaggccaatc gcatcgtttc tttcgattgg acgatgtatg accaggggca
     1981 tgtcgtctat cgtccggcgc agatgtcggg ggatgaactt cgtatcgggg tggatcgtgc
     2041 ctatcgaaat ttctacgcaa cgtcctcaat cgccaatcgg tttccgctga gcggcaagcg
     2101 tcaccgcgcg caatggataa tctataacct gttcatgcgc agaggatcgc agaccgagaa
     2161 catccaatcg atcgccgcgc caacggcgga gccggacgtc gctccgatgc cgccaatcct
     2221 gccgatcaag cgcgaatggc gggctgccgt tcttgaggcg gcaggccctg gtccgcattt
     2281 gaactaggcc cgcggcgcta gagagagccg tcatcgatag agtggcggag tttgatggcc
     2341 gcaaggaatt cctggcgggt tttgaagttc gtgcggaata cgcccagcat gcggctcgtg
     2401 accatcgtta cgtcgggcct gtgaactccc cgcgtcgtca tgcactcatg ggcgccttcg
     2461 actacgactc ccactcctga tggcttcagg acgctgttaa gacaggatgc gatctccgcc
     2521 gtcatttttt cctgaacctg catccgcttg gcaaagacgt cgaccaggcg cacgagtttt
     2581 gaaatcccga caacacgctt gcgcggcagg tagccgatgt ggacgcgtcc gataatcggc
     2641 gcgatatgat gctcgcaatg cgattcaaac cggatgtcgc gcaacaggac catttcgtca
     2701 tagtccgcca cttcctcgaa agtcctctgc agatactcgc gtggatcctc gaagtatccg
     2761 gcaaaccatt cttcgtaggc gcggacgacg cgacccgggg tgccgcgaag gccttcccgg
     2821 cgcggatcat cacccgccca ctgaatcagc gtgcgaaccg catcttcggc tgcttcccgg
     2881 gtcgggcgct cagtgctgga tgcggaggtc tttggacgac gatcggaact catgatgtgc
     2941 tcccggcgtg gcgccgcggt tatcggcaat tgtctttgga aaacacggca aattcattca
     3001 ttgcgtcgga cacggaattt tgtgttcgaa ttccactcga acgcaccgtg gcacaatgat
     3061 cgcgtcgggc caagcttgga tggccctcga cccggccacg caccaagttt caaccgagat
     3121 ctttggactt cagcctcgga cgcattcttt aacgaagcgg cgacgttgca gatagcttga
     3181 tgtctttgcg cgcgcttcgc gctggcaggc cgcgcgcttt tccatagcga tccggtctgc
     3241 cgtggcgatc tcgccagggc ttcttggctt ggatggagtt tgagccagca ccggagcggt
     3301 ggcgataaaa aacagcacgc tgcaggcgaa aacgcccaag ggtctgatca cgaaagcagc
     3361 cccctgaaat cgggcgctag agatagctcc
//
LOCUS       DATDHO010000473         1548 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_368709, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000473 DATDHO010000000
VERSION     DATDHO010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_368709"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..>1548)
                     /locus_tag="VIY07_09115"
     CDS             complement(166..>1548)
                     /locus_tag="VIY07_09115"
                     /inference="COORDINATES: protein motif:HMM:NF012754.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381948.1"
                     /translation="EEDYMRMCNYTAHETFYDPVTGDQTGPGGFFGAYKATYDPNLWI
                     RQSLDPVDNRPPALTGPLEEARLCFQQEQAERVMIDIGSNTSIIGVGADARIINGGLR
                     LGFVNQNDPDDARNYRSKNIVIRNVTFADAFDMFSSWDPKDSFSITITNTSGCQAVFD
                     AATDSGPHRCVFRGGRWNTEYDSISVMNAERVWIDHNTFTDEPRFDTQFPPVFAAPFN
                     EATQKVQHHDGHVDVTLLATKVTISNNHLLRHDKGNLLGGNDIAGLVPGYGPGKIDVT
                     FHGNYYQNMIQRMPRVRFGRVHAYNNVFDANRLTTAEYRLGDTWATGTAAKLVTENNL
                     FDILNNNLIIPRIINYASTVANRDVCVNAGFTLAECGTYYYDQGTWVTMRTATISATT
                     LFDTFTALSNIQDDSAANAPLFKLDPADPNVFWTPSQTYSYRLMPVSTPEEQAALRKQ
                     VIANAGAGKL"
BASE COUNT          256 a          446 c          502 g          344 t
ORIGIN      
        1 ttccacctca atcgctccgc cctctgtctt gagcgcatca cccgcgctta gcgactgccc
       61 attcgtgatc gccttgcctc gcgccacgtg gacatagccc ttccgccctc gagcgaggtt
      121 caaccgcatg ctcggcgccg accggcctga atggaacatg agcccttaga gcttgccggc
      181 gcctgcgttg gcgatcactt gtttgcgaag cgcggcttgt tcttccggcg tgcttactgg
      241 catcaacctg tagctgtagg tttggcttgg cgtccagaac acattcggat cggccggatc
      301 gagtttgaag agcggcgcgt tcgccgcgct gtcgtcctgg atgttgctga gcgcggtgaa
      361 ggtgtcgaac agcgtggtcg ccgagatggt cgcggtccgc atcgtcaccc acgttccctg
      421 gtcgtagtag tacgtgccgc actcggcgag cgtgaatccg gcgtttacgc agacatcgcg
      481 gttcgcgacc gtcgaggcgt agttgatgat ccgcggaata atcaagttgt tgttgaggat
      541 gtcgaaaagg ttgttctcgg tgacgagctt cgccgcggtg ccggtggccc aggtatcgcc
      601 caggcggtac tccgcagtgg tgagccgatt ggcgtcaaaa acgttgttat aggcgtggac
      661 gcggccgaag cgtacgcgcg gcattcgctg gatcatgttc tggtagtagt tgccgtggaa
      721 ggtcacgtcg atcttgcctg gcccgtaccc cggcaccaag ccggcgatgt cattgccacc
      781 gagcaggttg cccttgtcgt ggcgcagtag gtggttgttg gagatggtca ccttcgtggc
      841 gagcagcgtc acgtcgacgt ggccgtcgtg gtgctgcact ttctgcgtcg cctcgttgaa
      901 cggtgcggca aaaacgggcg ggaattgcgt gtcgaagcgc ggctcgtcgg tgaaggtgtt
      961 gtgatcgatc cacacgcgct cggcattcat caccgaaatg ctgtcgtact cggtattcca
     1021 gcggcccccc cggaacacgc agcgatgcgg ccctgagtcc gtggcggcat cgaagaccgc
     1081 ttggcagcca ctggtattgg tgatggtgat gctgaacgag tccttcggat cccagctcga
     1141 gaacatgtcg aacgcatcag cgaaggtgac gttccggatc acgatgttct tcgatcggta
     1201 gttgcgcgca tcatcgggat cgttctgatt gacgaagccg aggcgcaggc cgccgttgat
     1261 gatccgcgca tcggcgccaa cgccaatgat cgaggtgttc gagccgatgt cgatcatgac
     1321 gcgctcggcc tgttcttgct ggaagcacag ccgcgcttct tcgagcggcc cggtcaacgc
     1381 cggcggacgg ttgtcgaccg ggtcgagcga ttgccggatc cacagattcg ggtcgtacgt
     1441 tgccttgtag gcgccaaaga atccgccggg gccggtttgg tcgccggtga ccggatcgta
     1501 gaaagtctca tgcgccgtgt agttgcacat gcgcatgtag tcctcttc
//
LOCUS       DATDHO010000474         1978 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_22572, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000474 DATDHO010000000
VERSION     DATDHO010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_22572"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..356
                     /locus_tag="VIY07_09120"
     CDS             <1..356
                     /locus_tag="VIY07_09120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381949.1"
                     /translation="CGGEAAGHNALRGSGPNQKHLFNVEINARRLILVTNKAYQADPD
                     DKQAFRAETEKILKVEDDLYRDISLALDNGASLDEICYRIEIAKIKEATVGLQAKMAI
                     DDLVKVLAAHIKQSA"
     gene            609..1475
                     /locus_tag="VIY07_09125"
     CDS             609..1475
                     /locus_tag="VIY07_09125"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY6381950.1"
                     /translation="MPRRRAGWHLGTMQYQQTLPLKDHEVVITFDDGPLPPYSNIILD
                     ALASHCVKATYFLVGQMAHAYPSVVRRIYNEGHTIGTHSQHHPHFERLSMRRVEREVD
                     GGINSVTAALGDAKALSPFFRIPYLGRTNAIERFLERKQLVTWSADVDTNDWWRGSSP
                     GAIVKRTMRQLNAKGRGIILMHDIHRATAMALPILLKELKTNGYNVVHVTAAGERPKS
                     IPELMALPASDEKAPPADLTNAPSGDHAVTARQTHQIKKRTVTRHHPAHWWFQADQVT
                     TTKRPFWVFSGY"
     gene            complement(1519..>1978)
                     /locus_tag="VIY07_09130"
     CDS             complement(1519..>1978)
                     /locus_tag="VIY07_09130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381951.1"
                     /translation="ASFEPFFTLASQFGFAEEARRQDIVPVLLYLMTPDRTSVEAYRN
                     LCSRLPEVMPAPVHNEIFGVAQHGNKYAPIGSGAVIIRLPLLVSNVRKYVERPPFSFA
                     NSESAAVLDADDYIELQHWLRRIYREFRELDQRILLTDLKSDAARAVTKR"
BASE COUNT          459 a          585 c          549 g          385 t
ORIGIN      
        1 tgtgcggcgg tgaagccgct ggccataatg ctctgcgcgg atcgggtccc aatcaaaaac
       61 acctgttcaa tgttgaaatc aacgcgcgaa ggctaatcct tgttacgaac aaggcgtacc
      121 aggcggaccc agacgataaa caagcatttc gcgccgaaac cgagaaaatt ctgaaagtag
      181 aggatgattt atacagggac atttctctgg cgttggataa tggagcaagc ttagacgaaa
      241 tttgctaccg gattgaaata gccaagatca aagaggctac ggtcggcctg caagccaaaa
      301 tggctataga cgaccttgtt aaagtgcttg cagcccacat taagcaaagt gcctgatacc
      361 accgcacgta cgagcgcgcc gccgataccc gtacgccgcc caaaagcgga catggaccgc
      421 caccgcgttt agcggctgag tccgtaaagc gtgtagttcg gacacacctc cacatcaaaa
      481 ccggttggtg ttccgtctgg cgtgtagcct atcgctggat ggcagccgcg tcgaacgggt
      541 atgcagccga cgacggtgca agcaatctgt ggctgggcaa cagtggcagc ctccgagtga
      601 cgtttgtggt gcctagacgc cgcgctggct ggcatcttgg caccatgcag taccagcaga
      661 cgctgccgct gaaggaccac gaggtggtga ttaccttcga tgacggcccg ctgccgccct
      721 atagcaacat cattctcgat gctttggcgt cgcactgcgt gaaggctacc tatttcctgg
      781 tcggccagat ggcgcatgcc tatccgtccg tcgtccggcg catctacaac gaaggccata
      841 ccatcggcac tcacagccag catcacccac acttcgagcg cttatcgatg cggcgggttg
      901 agcgcgaggt cgacggcggc atcaattctg tcacggccgc acttggcgac gccaaggcgc
      961 tctcgccttt cttccgcatt ccttacctcg gccgcaccaa tgcgattgaa cggttcctgg
     1021 agcgcaagca gcttgtcacc tggagcgcgg acgtcgacac aaacgattgg tggcgcggca
     1081 gcagtccggg agcgatcgtg aaacgcacca tgcggcagct gaacgcaaaa ggccgcggca
     1141 tcattttgat gcacgacatc catcgggcca cggcaatggc gctaccgatc cttctcaaag
     1201 agctgaagac gaacggctac aatgtggtgc acgtcacggc cgcgggcgag cggccgaaat
     1261 cgatccctga actaatggcc ttgcccgcct ctgacgagaa agccccgccg gccgatctca
     1321 ccaacgctcc cagcggcgat catgctgtga ccgctcgaca aacccaccag atcaagaagc
     1381 gtacggtaac caggcatcat ccggcgcatt ggtggttcca agcagaccaa gtgacgacga
     1441 ccaaacgtcc gttttgggtc tttagcggat attgagatac tttcgcgcca tgtccgcttt
     1501 atccccgaaa gcggacaatc aacgcttcgt cacggcgcgc gccgcatcag acttcagatc
     1561 agtcagcaaa atgcgctgat cgagttctcg gaactcacga taaatccgcc gcaaccagtg
     1621 ctgcaactcg atatagtcgt ccgcatcgag cacggcggca ctctctgagt ttgcgaacga
     1681 gaagggtggc ctctcaacgt atttgcgcac gttcgacaca agtagtggaa ggcgtatgat
     1741 cacagcaccg ctgcctatcg gcgcgtattt attcccgtgt tgcgcgaccc cgaatatttc
     1801 attgtgtacc ggcgccggca tcacctcagg caaccggcta cacaggttgc gataggcctc
     1861 aactgatgtg cggtccggcg tcatgaggta cagcagcact ggtacaatgt cttggcgacg
     1921 cgcttcttcg gcaaagccga actgactggc cagcgtgaag aagggttcaa acgatgct
//
LOCUS       DATDHO010000475         1624 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_171210, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000475 DATDHO010000000
VERSION     DATDHO010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1624
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171210"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..529
                     /locus_tag="VIY07_09135"
     CDS             <1..529
                     /locus_tag="VIY07_09135"
                     /inference="COORDINATES: protein motif:HMM:NF013714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6381952.1"
                     /translation="IARKLTGRGRGLGGLCKGFAKAGSIACRHDFRSSADIVTGMLGE
                     ATIRELGIGMTGSVVGPGDPGYETARGVWNRAIDKRPALIVRASGTEDVARAVSFARS
                     EGRPIAVRGGAHSIAGFSTCDDGIVIDLARLNDVQVDVESRRAFTSTGHDLPEMPWQI
                     MERGYICELYRGGRI"
     gene            689..925
                     /locus_tag="VIY07_09140"
     CDS             689..925
                     /locus_tag="VIY07_09140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381953.1"
                     /translation="MRLSIVFDDNGTIMAASAGDEEADVPVPGPGENIRSFDIPDEIG
                     DAELHQTVERVLTDTDASALMHLPARRETEDGPR"
     gene            983..>1624
                     /locus_tag="VIY07_09145"
     CDS             983..>1624
                     /locus_tag="VIY07_09145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381954.1"
                     /translation="MFRQPLNGVEPGQIAVRRSLATGTAALLLTSLVVGVPPTATAED
                     TSQAAAAVISEWNEIAQKTLLADTTKAVPENFLYMGFVQAAVYNAVVGIEGRYEPYRF
                     RSKAPQGASSQAAAVAAAHKVLLAYSPDAQHADLDTAYAASLAKIPDGDAEIRGTTFG
                     ELAADTLIKQRAQDGRNAPIKFTQEPAPGVWRPTPAPTTPPNLAPFAVPWLGSV"
BASE COUNT          367 a          463 c          502 g          292 t
ORIGIN      
        1 cattgctaga aaactgacgg gcaggggtcg cgggctcggc gggttgtgca aaggatttgc
       61 aaaggcaggc tccatagcct gccggcatga cttcaggtcg tcggcggaca tcgtgaccgg
      121 catgctcggc gaggcgacga tacgcgagtt gggcatcggc atgactggct cggtagtcgg
      181 tcccggggat cccggttatg agacggcgcg tggcgtgtgg aaccgcgcga tcgacaagcg
      241 cccggcactg atcgtacgag ctagcggcac cgaggatgtg gcacgagcgg tcagttttgc
      301 tcgaagtgaa ggcagaccga tcgcggtacg tggcggtgcg cacagcattg ccggcttttc
      361 gacctgtgat gacgggattg tgatcgacct cgcacgtctc aacgatgttc aggttgatgt
      421 tgagtcacgg cgagcgttca cgtcgactgg gcacgatctg cccgaaatgc cgtggcaaat
      481 tatggaaagg gggtacatat gtgaacttta tcggggaggg cggatctgac aatctcggag
      541 aaagctttcc gtcacacatt tatagccggc tccaggctgt caaggatcaa tacgatccat
      601 tcaatctatt ccgattcaac atcaacatcc cgccgacgag atgcgaaaga tgatcgcatg
      661 acaggcgccc tggaaagaga gaacggcgat gagactcagc atcgtatttg acgataacgg
      721 caccattatg gccgcgagcg caggcgacga ggaagctgac gtgccagtac ccggacccgg
      781 tgaaaacatc cgctccttcg atatcccaga tgaaattggt gatgccgagc tgcaccaaac
      841 cgtcgagcgc gtactgactg acacggacgc aagtgccctg atgcatttgc cggctcgaag
      901 ggagactgag gatggcccgc gttgagtcaa tcatcaattt ttgagaacta caacatcaac
      961 ctgaattaga tggagaaaag acatgttcag acaaccacta aacggggtcg aaccggggca
     1021 aatagcggtc cgtagatcac ttgccaccgg gacggcggcc ctgctgctca cttcacttgt
     1081 agtcggggtg ccgccaaccg ccactgcaga ggacaccagc caggcggccg cagcagtgat
     1141 ctctgagtgg aacgagatcg cgcagaagac actcctggcc gatacgacga aggcagtccc
     1201 tgaaaacttc ctctacatgg ggtttgtgca ggcggcggtc tacaacgccg tcgtcggcat
     1261 cgaggggcgt tacgagccgt atcgctttcg cagcaaggca ccgcaaggag cgtcctcaca
     1321 ggcagcggcg gtagccgccg cccacaaggt cttgttggcg tattcgccgg atgcgcagca
     1381 cgccgacctg gatacggcgt acgccgcctc gctggcgaaa atcccagacg gcgacgccga
     1441 gattcgcggc accacgttcg gcgagctggc ggccgacact ttgatcaagc agcgggcgca
     1501 ggacggacgc aatgcaccaa tcaaattcac gcaagaaccg gctccaggtg tatggcggcc
     1561 gacgccagcg cccaccacac cgcccaacct tgcccctttt gccgtcccat ggctgggatc
     1621 cgtc
//
LOCUS       DATDHO010000476         1751 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_319576, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000476 DATDHO010000000
VERSION     DATDHO010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1751)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1751)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1751
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_319576"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="VIY07_09150"
     CDS             <1..278
                     /locus_tag="VIY07_09150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381955.1"
                     /translation="MDQLATFLTSPTVAPGTLPTSDPQVAMADMHESSPEAAGIFRLF
                     HPLADPVQTVAAEAGTDDAEPVPLPPRRPRTAAVSGREALTLAASSR"
     gene            398..1351
                     /locus_tag="VIY07_09155"
     CDS             398..1351
                     /locus_tag="VIY07_09155"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_028174674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEY6381956.1"
                     /translation="MSGKNGAIKLVAGNSNPALAKGIANYLKLPLTKAVVRRFADMEI
                     FVEIQENVRGADVFVIQSTSFPANDHLMELLIIIDALRRSSARRITAVIPYFGYARQD
                     RKPGPRTPISAKLVANLITRAGADRVMTLDLHAGQIQGFFDIPTDNLYASPVMVRDIR
                     ERLKLDNVMVVSPDVGGVVRARGLAKRINAPLAIIDKRRERPGESEVMNVIGDVAGYT
                     CVLVDDIVDSGGTLVNAADALIENKAKTVYAYISHGVLSGGAAKRIANSRLEELVITD
                     SIQPTKDILSAGNIRILQIASLIGEAIGRTAAEESVSSLFD"
BASE COUNT          342 a          539 c          510 g          360 t
ORIGIN      
        1 gcatggacca gctggcaacg ttcctgacct cgcccacggt ggcccctggc actttgccga
       61 cgagcgaccc gcaagtggcg atggctgaca tgcacgaatc gtcacccgaa gctgcgggaa
      121 tattccgcct gttccacccg ctggctgatc ctgtgcagac cgttgccgct gaggccggta
      181 ccgacgatgc cgaacccgtt cctctaccgc cccggcggcc gaggactgcc gcggtgtcgg
      241 gccgagaagc cctgacactt gcagcttcca gccgttgatt gccaagcggc ctttcgcaca
      301 aggctgaggt acaaagccct actggtgtat tgccgcgccg tgcctgcctt gttatgacca
      361 cgccgcctgt ggtggggagt gagggcgagg gctaaagatg tcgggcaaga acggagcgat
      421 caagctcgtc gccggcaatt ccaatcctgc gctggcaaaa ggcatcgcga attatctcaa
      481 gcttccgctg accaaagcag tcgtccgccg gttcgcggac atggaaattt tcgtcgaaat
      541 tcaggagaac gtacgcggcg cggacgtttt cgtgatccag tcgacttcct ttccggccaa
      601 cgatcacttg atggagctgc tcattataat cgacgcgctg cgacgctcct ccgcgcgccg
      661 catcacggcg gtcattccgt attttggtta cgcccgccag gatcgcaagc ctggcccccg
      721 aacgccaatc tccgcgaagc tcgtcgccaa ccttatcact cgtgccggtg cagaccgcgt
      781 catgacgctg gacctgcacg ccggtcagat ccagggattt ttcgatatcc cgaccgataa
      841 cctctatgcg tcgccggtga tggttcggga catccgcgag aggttgaagc ttgacaacgt
      901 gatggtcgtt tcgcccgatg tcggcggcgt ggtacgtgca cgcgggctgg caaagcgcat
      961 caacgcgccg ctggccatca tcgacaagcg tcgtgaacgt cccggtgaat ccgaagtaat
     1021 gaacgtgatc ggtgacgttg ccggctatac ctgcgttctg gtggacgaca tcgtcgattc
     1081 cggaggtacg ctcgtaaatg ctgccgacgc cttgatcgaa aacaaagcca agacggtcta
     1141 cgcctatatc agtcatggcg tcttgtcagg cggcgccgcc aagcgcatcg cgaactcgcg
     1201 actcgaggag ctcgtgatca cggactcgat tcagccgaca aaggacattc tgtctgccgg
     1261 gaatattcgt attctgcaaa tagcctcgct gatcggcgaa gcaatcggcc gcactgccgc
     1321 cgaagagtcg gtctcaagcc ttttcgactg agcctgccac acctcatcac cataccagac
     1381 agagcgccgg tccggcgcca aggcaatgcg agtgtgcacg tctctggatt cgcgtctcca
     1441 ctctctgcgc tcgctccaag tgatcgggat gaaattatcc accgctgagt catcggcgac
     1501 gaagcaatgg ctgtggagag tcggctccgc cgggttgcct atgacgggca aatcacggct
     1561 catgacactt gacgatgcct ttggcgagcg gaatcaagca ggttatagtc gaatcgcttg
     1621 gtgattcgct ttcgccgtca aggcatcccg taaactcagc gtcaactggt ggccagactc
     1681 cgcttggagt cttgcccggt ccgtgcgtgt ggtggcgtgc gtttcctctc gctcaattca
     1741 gccaagcgga g
//
LOCUS       DATDHO010000477         2614 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_419062, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000477 DATDHO010000000
VERSION     DATDHO010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419062"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..500
                     /locus_tag="VIY07_09160"
     CDS             <1..500
                     /locus_tag="VIY07_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HEY6381957.1"
                     /translation="IGAEIVEDLALLALKPEVVVVGASGGGLAAGISLGVKAKVPSAK
                     FYVVEPEGFDDTLRSFASGKREANARMSGTICDALMSNTPGELTFPITRELIGQGTTV
                     NDAEVGYAVRFAFRELKLVVEPGGAIGLAALLAGKFRVDGKIVVAILSGANVDVDLFD
                     RLVAG"
     gene            complement(510..1268)
                     /locus_tag="VIY07_09165"
     CDS             complement(510..1268)
                     /locus_tag="VIY07_09165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381958.1"
                     /translation="MPSEMTARAGPLPDASSERNYQAFYGALAASARGRDFLAEYARR
                     NRKADGEKLLAAIDRLQSLLPGTATGQAETVKRELRSLLVEINAIQAELDASLLAIKA
                     AKFTELATLVEQRISSILTSLDAQPIPKADIVPLSEPDPDVVEGCERAHLAVVPVPEQ
                     PELPIPTPAASRPPPIALVRSEAIMAEVAFIEPPAKPIALSEKNSPDSAASSSDEPQA
                     ASQENPATKLVAQSADPLQSIMALSEEERLALFT"
     gene            1398..2567
                     /locus_tag="VIY07_09170"
     CDS             1398..2567
                     /locus_tag="VIY07_09170"
                     /inference="COORDINATES: protein motif:HMM:NF037955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6381959.1"
                     /translation="MQPVFRMSWGFIPRLATLYAALFLLSGIQMPFFPVWLEAKNVDA
                     KLIGIILAVPMVARVLAIPLVTREADRRDAVRDALVIASLASVAGYVLVGLSAGSTAI
                     LITYTLTALFSTPLMPLAETYALNGLLARGRAYGPVRLWGSLAFIVGNFAGGFAADEI
                     PARHLIWLMVAASALIAVAAWQLAPVTGDPLQQKTETPQRHGPLWDPAFVAVLVGASL
                     IQASHALFYGFSAVQWHGAGLDGTFIAALWALGVAAEIALFAVQGRLPPFLTPTAMLM
                     IGALAGTLRWLGMALDPPALALPWLQILHALSFGATHLGALMFLAQHAPAGQAATAQG
                     YLAIAAGLAMAAATGISGLLYADFGSGAYIAMALTAVAGGACGFVAHRIRRESAR"
BASE COUNT          405 a          784 c          851 g          574 t
ORIGIN      
        1 ccatcggcgc cgaaatcgtc gaggatctgg cgttgcttgc actcaagccg gaagtggttg
       61 tggtgggcgc ctcagggggt ggtctcgccg ccggcatttc gctgggggtg aaggcaaaag
      121 taccctccgc gaagttctac gttgtcgagc cggaaggttt tgacgacacg ctgcgctcgt
      181 ttgctagtgg aaaacgcgaa gcaaatgcac gcatgagcgg cacgatctgc gatgcgctca
      241 tgagcaacac gccgggcgag ctgacgtttc cgattacccg tgagctgatt gggcagggca
      301 cgaccgtaaa cgatgccgag gttgggtacg cagtccggtt tgcgttcagg gagcttaagc
      361 tcgtcgtcga accgggcggc gccattgggc ttgccgcgtt gctcgccggc aagttcagag
      421 tcgacggcaa gatcgtcgtt gctatcctgt ccggcgccaa cgtggatgtt gatctgttcg
      481 accgcctggt cgccggctga cgccagggtt caggtaaata gcgcgaggcg ctcttcttcg
      541 ctcagggcca tgatcgattg aagcggatcg gccgattggg ccaccaactt tgtggccgga
      601 ttttcctggc tggccgcctg cggctcatcg ctgctcgagg cggctgagtc cggcgaattt
      661 ttctcgctca acgcaattgg tttcgccggc ggttcgataa atgccacctc cgccatgatg
      721 gcttcgcttc gaaccagagc gattggcggt ggccgtgaag cggctggcgt ggggataggc
      781 aattccggct gctcgggtac cggcaccacc gccagatgcg cccgttcgca gccctcgaca
      841 acatcagggt ccggttccga caggggcaca atgtcggctt ttggaatcgg ctgcgcgtcc
      901 agcgaagtca ggatgctcga aattcgctgt tcgacgagcg tggcgagttc cgtgaacttt
      961 gccgccttga tggcaagcag gctcgcgtca agctcggcct gtattgcgtt gatctcgacg
     1021 agcagtgagc gcagctcgcg cttgaccgtt tcggcttgtc ctgtcgcagt gcccggcagc
     1081 agcgactgca gcctgtcgat cgccgcgagc aatttttcgc cgtcagcttt ccgatttcgt
     1141 ctggcatatt cagcgaggaa gtctcgccca cgcgcgctcg ctgcgagcgc tccgtagaac
     1201 gcctggtaat tgcgctcgct ggacgcatca ggcagcgggc cggcgcgggc ggtcatctcg
     1261 ctcggcatgt gcaatcctcg aggtttacgc ttatcaagta tcacgttgat tcggccagtc
     1321 tatttccgtc cggcggtcgc cggcagggcg cagatcaacg cgatggggcg atatcttacc
     1381 cgggctgagg cggggcaatg cagcctgttt ttcgaatgtc ctgggggttc ataccgcggc
     1441 tggcaactct gtatgcggcc ctgttcctgc tgtccggcat ccagatgccg ttctttccgg
     1501 tctggctcga ggcgaagaat gtcgacgcga agctgatcgg gatcatcctc gccgtgccaa
     1561 tggtcgcccg ggtgctcgca attccgcttg tgacgcgcga ggctgaccga cgcgatgccg
     1621 tccgcgatgc gttggttatc gcaagtcttg caagcgtggc gggatacgtg cttgttgggc
     1681 tttcagccgg cagcacggcg atcctgatca cttacacgct gaccgcactc ttctcgacgc
     1741 cattgatgcc gcttgcggaa acctacgcgc tcaacgggct tcttgcgcgc ggtcgcgcat
     1801 acggacctgt gaggctgtgg ggctcgcttg cttttatcgt cggcaatttc gctggaggct
     1861 ttgccgccga tgaaattccg gcgcgccatc tgatttggct catggttgct gcaagcgccc
     1921 tgatagcggt cgcagcatgg cagttggcgc cggtcacagg cgatccgctg cagcaaaaaa
     1981 ccgaaacgcc tcaacgccac gggccgcttt gggatcctgc cttcgtcgcg gtacttgttg
     2041 gcgcgagcct catccaggcg agtcatgccc tgttctacgg gttctccgct gttcaatggc
     2101 acggtgccgg tcttgatggg acctttatcg ccgcgctctg ggctcttggg gtcgccgccg
     2161 agatcgcatt gttcgcggtg caaggacggc tgccgccatt tcttacaccc accgcgatgc
     2221 tgatgatcgg cgccttggcc ggcacgctgc gctggctggg catggcgctc gatcctccgg
     2281 ccctcgcgct gccttggctg caaatactgc atgcattgtc attcggggcg acgcatctgg
     2341 gagcgctcat gtttcttgcg cagcacgcgc cggccggtca ggcggcgacg gcgcaaggtt
     2401 atcttgcgat tgccgcgggc ctggcaatgg ctgcggcaac aggcatttca ggcctgctgt
     2461 atgccgactt cggcagcggc gcgtatatcg cgatggcgct aacggcggtc gctggcggcg
     2521 cttgcggatt cgtagcgcac cggattcggc gtgagtcggc gcgctgaccg cacctgctcg
     2581 cgaccgtcgc gatcgcaggt cgccacgatg ccgt
//
LOCUS       DATDHO010000478         2112 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_171359, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000478 DATDHO010000000
VERSION     DATDHO010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2112)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2112)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2112
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171359"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..907
                     /locus_tag="VIY07_09175"
     CDS             <1..907
                     /locus_tag="VIY07_09175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008596579.1"
                     /note="catalyzes the conversion of salicylyl-CoA to
                     gentisyl-CoA; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional salicylyl-CoA
                     5-hydroxylase/oxidoreductase"
                     /protein_id="HEY6381960.1"
                     /translation="GLYSPEHETAWKRIVDFVHAETSAKIAIQLGHSGAKGSTQLGWE
                     ESDAPLKAGNWPVLAPSAVPWSPQNQMPREMSRVDMDTIRDEFVRSAEMAARIGFDWL
                     ELHYAHGYLMSSFITPLTNRRTDEYGGSLENRMRFPLEVFRAVRKAWPDEKPISVRIS
                     AHDWVGSDGIRPQDAVEIARILTEAGVDLIDVSAGQTSTRARPIYGRMFQTPFSDRIR
                     NEAGVATLAVGNIYEPDHVNSILMAGRADLVCLARPHLSDPYWTLHAAAELRYDGVNW
                     PKPYLAGRDQLYRLRSRSEAMTGKV"
     gene            907..1674
                     /locus_tag="VIY07_09180"
     CDS             907..1674
                     /locus_tag="VIY07_09180"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016558317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6381961.1"
                     /translation="MGTLDNRHALITGGGTGIGAAIARALAKEGAAVSLAGRRKAPLE
                     DVAARLPKATAIVADVTKDSDCAAMAATARAANGPIDIVIANAGAAASAPMAKLDLAH
                     WHNMIDVNLTGAFLTVKAALADVTRKSEGPKRIIFIASTAGLKGYPYVAAYCAAKHGV
                     VGLARALSLELEPTGVTVNAVCPGYTDTPLLDTAAEKISAKTGRSSEEARAMLAQDNP
                     SGRLIKPEEVAQAVIRLCSPSGASVNGQAIEVTGGRQ"
     gene            1671..>2112
                     /locus_tag="VIY07_09185"
     CDS             1671..>2112
                     /locus_tag="VIY07_09185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008596575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY6381962.1"
                     /translation="MSVANKPRERTVARPPSKQRLRLWLRLLRSSRAIEARLRERLRT
                     KFAITLPQFDVMATLARYENGITMTELSRHLMVSNGNVTGIIDRLAAEKLVMRQAPAT
                     DRRSYIVRLTPKGLSQFSAIAKAHEDWVDELLVDIDAAEAESIIQ"
BASE COUNT          406 a          660 c          661 g          385 t
ORIGIN      
        1 ggggctgtat tcgcccgaac acgagaccgc ctggaagcgc atcgtcgatt ttgtccacgc
       61 tgaaacgagt gcgaagattg caatccagct cgggcactcg ggcgcgaagg ggtcgaccca
      121 gcttggctgg gaagaaagcg atgcaccgct gaaggcggga aactggcccg tgctggcgcc
      181 gtccgcggtg ccttggagcc cgcaaaacca gatgccgcgc gaaatgtctc gcgtcgacat
      241 ggacacgatt cgcgacgagt ttgtgcgctc ggcagaaatg gctgcgcgca tcggtttcga
      301 ctggctcgaa ctgcactatg cgcacggcta cctgatgtcg tctttcatta ctcctcttac
      361 caatcggcgg accgatgaat atggcggttc gcttgagaat cgcatgcgct ttccgctcga
      421 agttttccgc gcggtgcgca aggcatggcc ggatgaaaag cccatttcgg tccgcatttc
      481 cgcacacgac tgggttggct cggacggcat acgaccgcag gatgcggtcg agattgccag
      541 aatcctcacg gaggccggtg tcgatctcat cgacgtgtcg gccgggcaaa cctcgacgcg
      601 cgctcgcccc atctatggcc gaatgttcca gaccccgttc tccgaccgca ttcgcaacga
      661 ggccggtgtc gccacgctcg cggtcggcaa catctacgag cccgatcatg tgaactcgat
      721 cctgatggcc ggccgcgccg atctcgtgtg ccttgcgcgc ccgcatcttt ccgacccgta
      781 ctggacgctg catgcggcgg ctgaacttcg ctacgacggc gtgaactggc cgaaacccta
      841 tttggcgggc cgcgaccagc tttatcgcct taggtcgcgc agcgaagcga tgacaggaaa
      901 agtctgatgg gcacgctcga caatcgccac gccttgatca cggggggagg caccggaatt
      961 ggcgcggcca ttgcacgcgc gctggcgaag gaaggcgctg ccgtttcatt ggctggccgg
     1021 cgcaaggctc cgctggagga cgtcgctgcc aggcttccga aagccacggc aattgtcgct
     1081 gatgtgacga aggactccga ctgcgcggct atggccgcga cggcgcgagc ggcgaacggg
     1141 ccgatcgata tcgtcattgc gaatgcgggg gctgctgcca gcgcgcctat ggcaaagctg
     1201 gaccttgctc actggcacaa catgatcgac gtcaatctga ccggcgcctt cctcacggtg
     1261 aaggccgccc ttgccgatgt cacgcgcaag tccgaaggcc cgaagcggat catcttcatc
     1321 gcctcgactg ccgggttgaa gggctatccc tatgtggctg cctattgcgc agccaaacac
     1381 ggggtcgttg gtctcgcgcg agccctcagt ctcgaacttg agccaaccgg cgtgaccgtc
     1441 aatgccgtgt gccctggcta taccgacacg ccgctcctcg acactgcagc ggaaaaaatt
     1501 tccgccaaaa ccggtcgctc ttcggaggag gcccgcgcca tgctggccca agacaatccg
     1561 tccggccggc tcatcaagcc cgaggaggta gcgcaagcgg tgatcaggct gtgctcgcca
     1621 tcgggggcgt cggtgaatgg gcaagcgatc gaagtgactg gaggccgaca atgagtgttg
     1681 caaacaagcc ccgcgagcgc accgtcgcgc gtcctcccag caagcagcgg ctgcggctgt
     1741 ggctcaggtt gctgcgctcc tcgcgcgcga tcgaagctcg acttcgtgaa cggctgcgca
     1801 ccaaattcgc aatcacgctt ccccaattcg atgtcatggc cacgctcgcc cgttacgaga
     1861 acggcatcac catgaccgag ctgtcgaggc atttgatggt gtcgaacggc aatgtcacgg
     1921 ggatcatcga caggttggct gccgaaaagc tggtaatgcg gcaagcaccg gcgacggacc
     1981 gccggtccta tatcgttcgg ctcacgccga aggggctctc gcagttttcg gcgatcgcca
     2041 aggcacatga agactgggtc gacgagctcc tggtggacat cgacgccgcg gaagcggaat
     2101 cgatcattca ac
//
LOCUS       DATDHO010000479         2369 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_171390, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000479 DATDHO010000000
VERSION     DATDHO010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171390"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..463)
                     /locus_tag="VIY07_09190"
     CDS             complement(<1..463)
                     /locus_tag="VIY07_09190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY6381963.1"
                     /translation="MPMDESVRKAVLAAVPSLRAFAISLCGNVDRADDLVQETLLRAL
                     ANIDSFQPGTNMSAWLFTILRNHFRSEYRKRRREVEDSEGHHAESLKSQPDQYGHVEF
                     REFREALAQLPADQREALILVGASGFSYEEAAGICGCAVGTIKSRVNRARTR"
     gene            complement(463..651)
                     /locus_tag="VIY07_09195"
     CDS             complement(463..651)
                     /locus_tag="VIY07_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016989 - sigma factor antagonist activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NepR family anti-sigma factor"
                     /protein_id="HEY6381964.1"
                     /translation="MEATATRSKKVNAKPAKLGRDVQARLGQQLRAMYDEVVNQGIPD
                     RFSDLINRLDSSGKKDSQ"
     gene            880..1680
                     /locus_tag="VIY07_09200"
     CDS             880..1680
                     /locus_tag="VIY07_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6381965.1"
                     /translation="MSTSQAVAQHLPYLRRYARALSGSQASGDAYVAATLEALVQDPK
                     VLETGLSTRIALYRLFTKIWNSVSLNDRSAGPNPTQPVERHLAQIPPKPRQAFLLVAL
                     EGLSEDDAAKVLNVDAPTLRELVEESGRELAAEIATDVLIIEDETFIALDLEGLVESL
                     GHRVLGVARTHAEAVALAKAKRPGIILADIQLADGSSGLDAVNEMLRSFEVPVIFITA
                     YPERFLTGERPEPAFLIAKPFQPSTVSAVLSQALFFERNARRRERRAS"
     gene            1902..>2369
                     /locus_tag="VIY07_09205"
     CDS             1902..>2369
                     /locus_tag="VIY07_09205"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEY6381966.1"
                     /translation="MNVFIGRVTLSDAIAGRAGSRWPLDHNEISFMVRKMSGAQNAEL
                     EKIKNEYRKLEDQISAQAWELNLLRARFARYETALRGSQVTVFTQDRDLRYTSISNPM
                     LGRSIEDILGRTDAEILRGDSGAAIIAAKRQVLANGEARRAEIPLDDAPGTRWH"
BASE COUNT          437 a          705 c          735 g          492 t
ORIGIN      
        1 gtcgcgtgcg ggcccggttg acgcgcgatt tgatggtgcc gacggcgcat ccgcagatcc
       61 ctgccgcttc ttcgtatgag aagccagaag cgcctaccag gatcagcgct tcgcgctgat
      121 cggcaggcag ttgcgccagc gcttcgcgga attccctgaa ttcgacgtgg ccgtactgat
      181 ccggttgcga cttcagcgac tcggcgtgat gaccttcact atcttcaacc tcgcgccggc
      241 gcttgcggta ctccgaacgg aaatgattgc gcaggatcgt gaacagccac gccgacatgt
      301 tggtgccagg ctggaaggaa tcgatgttcg ccaacgctcg cagcagcgtt tcctgcacga
      361 gatcgtccgc gcgatctacg ttgccgcaca acgagatcgc gaatgcgcgg aggcttggca
      421 ccgctgcgag aacggctttg cggaccgact cgtccatggg cattattgcg agtccttttt
      481 tccgctcgaa tcgaggcgat tgatcaggtc gctgaaccgg tcgggaattc cctggttcac
      541 gacctcgtca tacattgcgc gcaactgctg tcccagacgc gcctgcacgt ctcgacccag
      601 cttcgccggt ttcgcattga cttttttgct acgcgtcgcc gtcgcttcca tcggattctg
      661 ctgtcccacg ggctttcgtt cgttcattgt tcaccccaca ctgccggggc ccgggcgggc
      721 accggtatcc cccttggttc tgtgcaaaac ccttgactga gcagatggtt cctcgtgaac
      781 ggaacttttt tgcggcgctt gcgttggcgc gctacaggct gatcgtatat ggggggcgca
      841 gaccccaagt cggtcgcagc gctaattcgg gagggattct tgtcgacatc acaagcagtt
      901 gcccaacacc tgccctatct tcgccggtat gcccgcgcgc tctcgggcag ccaggcttct
      961 ggagatgcgt atgtggccgc cacgctggaa gccctggtcc aggacccgaa ggtgctcgaa
     1021 acgggtctgt ccacgcggat agcgctctat cgactgttca caaagatttg gaattcggta
     1081 tcgctcaacg acaggtcggc agggcccaat ccgactcagc cagtcgagcg gcatctcgcg
     1141 caaataccgc ccaagccacg ccaggcgttc cttctggtcg cactggaagg gctgtctgag
     1201 gacgatgccg ccaaggtcct gaatgtcgac gctcccacgc tgcgcgaact ggtcgaggaa
     1261 tccggccgcg agctcgcggc ggagatcgcg accgacgtgc tcatcatcga ggatgagacg
     1321 ttcatcgcgc tcgatctcga ggggttggta gaaagtcttg gccatcgtgt gctcggcgtc
     1381 gcgcggacgc atgccgaagc cgtggcgctc gccaaggcca agcggcccgg aattattctt
     1441 gccgacattc agctcgcgga cggcagttcg ggtcttgatg ccgtgaacga gatgttgcgc
     1501 tcgttcgagg tgccggtgat tttcatcacc gcatatcccg agcgtttcct caccggcgag
     1561 cggccggagc cggccttcct gattgccaag ccgtttcagc cctcgaccgt gtcagcggtg
     1621 ctgagccagg ctctgttctt cgaacgcaat gcgagaaggc gcgagcggcg cgcaagctga
     1681 tggggttgcg gttttggccg ccgcgctgaa atgctgaaat gcggccacgc aactgttggc
     1741 gaaaccgcgc ggcgagcgga cctcgccgtg cgctatttta cggggggagg caacagattg
     1801 cgcccctgcg gcgttgaatc cggttgccac tgttgatcaa tattttgcga ctggccaggc
     1861 aaagaggcac aaagtgaccc ccttcgttga cagggtgtgc gatgaacgtc ttcatagggc
     1921 gggtcacttt gagcgatgcc atcgccggtc gcgccggatc gcgttggccg ctggaccaca
     1981 acgaaatatc ttttatggtg cggaagatgt ccggggcgca aaacgctgag ctggaaaaaa
     2041 tcaaaaacga atatcgcaag cttgaggacc agatcagtgc gcaggcgtgg gaattgaatt
     2101 tgttgcgggc gcgctttgcg cgctatgaaa ccgcgctgcg cggttctcag gtcacggttt
     2161 tcacgcagga tcgcgatctt cgctatacgt cgatcagcaa tccaatgctg gggcgctcca
     2221 tcgaggatat tctcggccgc acagacgcgg aaattctgcg aggggacagc ggcgctgcca
     2281 tcattgccgc aaaacgccag gtgcttgcga acggggaggc caggcgcgcg gaaattccgc
     2341 tcgacgatgc gccaggcaca aggtggcat
//
LOCUS       DATDHO010000480         2422 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_122414, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000480 DATDHO010000000
VERSION     DATDHO010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122414"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2422
                     /locus_tag="VIY07_09210"
     CDS             <1..>2422
                     /locus_tag="VIY07_09210"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY6381967.1"
                     /translation="ELVETFADQAVIAIENVRLFNETKEALERQTATGEILQAISGSP
                     TDTQPVFDAIVQSGLKLFPDAATTIVLRDGNRLKAVAIADGNQKRESAWKARFPDKLD
                     RSRMHGTAILDCKMIDIPDAKEHERGPLAPGVKNFLPSGYRAITIMPMIRGNAAIGAV
                     SVVRVAPGPLSEKQLELLKTFAAQAVIAIENTRLVNELRERTSDLSESLDQQTATADV
                     LKVISRSTFDLQTVLDTLVESAARLCEADSATIHRPKDGVYPLVASYGYPKKFEQYLR
                     THPIAPDPGSVLGRTVLKGKTVHVADVRADPAYKLTEQRAVGKYRAVLGVPLLREGMS
                     IGVIMLTRNAPRPFSEKQIELVTTFADQAVIAIENVRLFNETIQSLERQTATAEILKV
                     ISSSPTDTQPVFDAIVQSGIKLFGNAAISVALPKDNQVALAAIAASDPAREAAWRKRF
                     PFPLTHEYMHAIAILDRRIVDVPDVRSAPPDVAPGAKRFLATGNRAITIMPMMRGDEA
                     IGALSVVREAPGPLSEKQLELLKTFANQAVIAIENTRLLNELRQRTDDLSESLEQQTA
                     TSEVLSVISSSPGDLEPVFQAMLENAVRICDASFGMLFRMEDGLVSAAAMVGVPPQFA
                     EFWHRGPQRPGPRTALGRVIEKKETVHVADVKTERAYIEGEPIFVAAVDLGGFRTLLN
                     VPMLKDNELLGTIAIYRQEVRPFTDKQVELLSNFAAQAVIAVENTRLLNELRHRTDDL
                     TESLEQQTATSEVLSVISSSVADAQPVFEIIARSVARLCGSRFCHVFRFDGKLIHFAA
                     TYGYDAEA"
BASE COUNT          526 a          723 c          704 g          469 t
ORIGIN      
        1 ttgagctggt tgaaaccttc gccgaccagg cggtgatcgc gatcgagaat gttcgcttgt
       61 tcaatgaaac gaaggaggcc ctggagcgtc agaccgcgac gggcgaaatt ctacaggcca
      121 tcagcggctc accgaccgat acccagccgg tttttgatgc catcgttcaa agcggtttga
      181 agctttttcc ggacgctgcg accacaatcg tcctgcgcga tggcaatcgg ttgaaagcgg
      241 ttgccatcgc ggacggtaac caaaagcgcg aaagcgcatg gaaagcccgt tttcccgaca
      301 agctcgatcg ctcccgcatg catggcacgg cgatcctcga ttgcaaaatg atcgacatcc
      361 cggatgccaa ggagcacgaa cgcggtccgc tcgcgccggg cgtcaagaat tttctcccca
      421 gcggataccg ggccatcacc atcatgccga tgattcgcgg caacgccgcg atcggcgcag
      481 tcagcgtggt gcgcgtggcg ccgggcccgc tgtccgaaaa gcagctcgag cttctgaaga
      541 cctttgcggc gcaagcagtg atcgcgatcg aaaatacgcg cctggtcaac gagctgcgcg
      601 agcgaacaag cgatctatcc gagtcgctgg accagcagac tgcgacagcc gacgtactaa
      661 aggtcatcag ccgttcgacc ttcgatctgc agacggtgct cgacaccttg gtcgaatcag
      721 cggctcggtt atgcgaggcc gacagtgcaa ccatccatcg gccgaaagac ggtgtctacc
      781 cattggttgc aagctacggc tatccgaaga aattcgagca atacctgcgg actcatccaa
      841 tagcacctga tccggggtct gtactgggac gaacggttct taagggaaaa acggttcacg
      901 ttgccgatgt tcgcgcagat cctgcgtaca aattaaccga acagcgtgct gtcgggaaat
      961 atcgcgcggt actgggcgtt ccgcttttgc gcgaaggcat gtcaatcggc gtcatcatgc
     1021 tcacgcgcaa cgcacccagg ccgttctccg aaaagcagat cgaattggtg acaacatttg
     1081 ctgaccaggc cgtgatcgcg atcgaaaatg tccgcctgtt caacgaaaca atccagtcac
     1141 tcgagcggca aactgcgacc gcggaaatcc tcaaggtcat cagcagctcg ccaaccgaca
     1201 cgcagccggt gttcgatgcc attgtccaaa gcggaataaa gcttttcggc aatgccgcca
     1261 tcagcgtcgc gctgccgaaa gacaatcagg tagctcttgc cgcgatcgct gcttctgatc
     1321 cggcgcgcga ggcggcctgg cggaagcggt ttccgttccc gttgacgcat gaatacatgc
     1381 acgccatcgc cattctcgac cgacgcatcg ttgacgttcc cgatgtcagg agcgcgccgc
     1441 cggatgtcgc gcctggggcc aaaaggttcc ttgccacggg aaatcgcgcg atcacgatca
     1501 tgccgatgat gcgcggcgac gaagcgattg gcgcactgag cgtggtgcgc gaagctccgg
     1561 gcccgctctc ggaaaaacag cttgagcttt taaaaacctt cgccaaccag gcggtcatcg
     1621 ccatcgagaa cacgcgtctg cttaacgaac tgcgccagcg caccgatgat ctgagcgagt
     1681 ctctggaaca gcagacggcg acgtcggaag tgctaagcgt gatctcgagt tcgcctggcg
     1741 acctggagcc cgtcttccag gccatgctcg agaacgccgt gcgcatctgc gacgccagct
     1801 ttggcatgtt gtttcgtatg gaggacggcc tggtgtctgc ggcggcaatg gtcggcgtac
     1861 cgccgcaatt tgccgagttc tggcatcgcg gaccgcaacg cccgggtccg cgaaccgcgc
     1921 tcggacgcgt tatcgagaag aaagagacgg tgcacgttgc cgacgtcaaa acggaacggg
     1981 cttacattga gggcgagcct atttttgtgg ctgccgtcga cctcggaggc ttccgcacgc
     2041 ttctgaatgt accgatgctc aaggacaacg aactgctcgg gaccatcgcg atctatcgtc
     2101 aggaagtgcg gccgttcacc gacaagcagg tggaattgtt atcaaacttt gccgcccagg
     2161 cggtcatcgc ggtcgaaaac acgcgccttc tcaatgagtt gcgccatcgc accgatgatc
     2221 tgaccgagtc gctggagcag cagacggcga cctcggaggt gttaagtgtc atctcaagct
     2281 cggtggccga tgcccagcct gtattcgaaa tcatcgccag gagcgttgcc cgcctctgcg
     2341 gctctcgatt ctgccacgtg tttcgtttcg acgggaaact catccacttt gcagccactt
     2401 atggctacga cgccgaagca at
//
LOCUS       DATDHO010000481         1584 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_465296, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000481 DATDHO010000000
VERSION     DATDHO010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465296"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..214)
                     /locus_tag="VIY07_09215"
     CDS             complement(<1..214)
                     /locus_tag="VIY07_09215"
                     /inference="COORDINATES: protein motif:HMM:NF012759.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopantetheine-binding protein"
                     /protein_id="HEY6381968.1"
                     /translation="MASAAEDIVEMITGRISPTSGALQLSEPLDKLGLDSMQVVELIF
                     DIEEKFDIQIPLNANMDIESKTVGDLI"
     gene            443..>1584
                     /locus_tag="VIY07_09220"
     CDS             443..>1584
                     /locus_tag="VIY07_09220"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018386987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HEY6381969.1"
                     /translation="MRLLSNLLRRFIREGTLRVRDADGKVHVFGDRLPGPNVAIHLHD
                     RKLYTRLFINPELYAAEAYMGGRLTLEDGAAIHDFLMLFSVNRVGLYSHGPQKMTRRV
                     WRSLRRWHQANPIGLAAAHARHHYDISTELYRLFLDDQMQYSCAYFRDPEHDTLEQAQ
                     HNKLIHATSKLQLKPGMTVAEIGSGWGGFAIHLARETGARVTAVNVSPEQIKIARANA
                     EAAGVSDRVEFRELDYRQFTGQFDRVVSVGMMEHVGVGHFDEYFRKIRELLTPDGYAF
                     VHCIGRMSQPGTTGPFIRKYIFPGGYVPALSETFAATERCGLWCDDMEVLRLHYHYTV
                     KHWRERFAKNRARAAAIYDERFCRMWEFYLAAVELEFLHGSHMVFQL"
BASE COUNT          321 a          469 c          430 g          364 t
ORIGIN      
        1 gaatgagatc ccccacggtc ttgctttcga tatccatatt cgcgttaagc gggatctgta
       61 tgtcgaattt ttcctcgata tcaaaaatca actcgaccac ttgcatggag tccagcccca
      121 gtttgtccag cggttccgac agttgaagag caccactggt ggggctgatt cggcccgtaa
      181 tcatttcgac aatatcctca gcggcactcg ccataactat attttctcct tccaatattt
      241 ctgaatggcg caaacgatag cagacggcgg aattcccgga aagccaaggc agtctggaca
      301 gcgctctgtt atagggagat tggcagattt ggcgcgggca ttgcccgatt tctgcagggt
      361 aatctgcgcc gcctcttccg gcgccacgtg atcggtttcc aattcattgc tatggagatg
      421 gtacgaccgc ggaggacccc acgtgcgtct attgtccaat ttgcttcggc gcttcatccg
      481 cgagggcacg ctgcgagtcc gcgacgccga cggcaaggtg catgtattcg gcgatcgcct
      541 gccgggacct aacgtcgcca tccacctgca tgatcgcaag ctttacacca ggctgttcat
      601 caatccggag ctgtatgccg ccgaagcgta catgggcggc aggctgactc tcgaggatgg
      661 cgctgcaatc cacgacttcc tgatgctgtt ttccgtcaac cgcgtcgggc tttattcgca
      721 cggcccacag aaaatgacgc ggcgggtgtg gcgcagtctg cgtcgctggc atcaggccaa
      781 tccgatcggg cttgccgccg ctcacgcccg ccaccattac gacatctcga cagaactcta
      841 ccgtctgttc ctcgacgatc agatgcaata ttcctgcgca tattttcgcg atcccgagca
      901 tgatactctc gaacaggcac agcacaacaa actgattcac gccaccagca agttgcaatt
      961 aaagcccggt atgaccgtcg ccgagattgg gtctggctgg ggcggcttcg ccattcatct
     1021 tgcgcgcgaa acgggcgctc gtgtcaccgc ggtcaacgtt tcgcccgagc agatcaagat
     1081 agcgcgcgcc aatgccgagg ctgccggcgt ttccgaccgt gtcgaatttc gcgagttgga
     1141 ctataggcag ttcaccggcc agtttgaccg cgtagtctcg gtcggcatga tggagcatgt
     1201 cggtgtcgga cacttcgacg agtatttccg aaagatccgc gagctactga cgcctgacgg
     1261 ctatgccttc gtccactgca tcggccggat gtcgcagccc ggcaccacgg gcccgttcat
     1321 ccgcaaatac atctttcccg gcggttatgt acccgcgctg tcggagacct ttgccgccac
     1381 tgagcgctgc ggtctgtggt gcgacgatat ggaagtgctg cggctacatt atcattacac
     1441 agttaaacat tggcgcgagc gcttcgctaa aaatcgagcc cgggcggcgg cgatctacga
     1501 cgaaagattc tgtcggatgt gggaattcta tctcgctgcc gtcgaactcg aatttcttca
     1561 cggctcacac atggtgtttc aact
//
LOCUS       DATDHO010000482         1752 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_465344, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000482 DATDHO010000000
VERSION     DATDHO010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1752)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1752)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1752
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465344"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..659
                     /locus_tag="VIY07_09225"
     CDS             60..659
                     /locus_tag="VIY07_09225"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEY6381970.1"
                     /translation="MKPLLFPTDLPSFLDLIRQHGDAAYSVMFAYAASHSLLLALFAG
                     YAAHSGALQLGTLVLVCWFGSFAGDAVRFWIGRHFGTRLLGSFPRLARAVQTAARLTD
                     RHYVLMILFHRYPHGIRGVAGFAYGMSRLSWSTFLVLNFAAAGLWSCTVVSAGYVFGQ
                     VSEKLMSDASSGIGSVMLVMFLGLSWILSRKLEHVVDRS"
     gene            937..>1752
                     /locus_tag="VIY07_09230"
     CDS             937..>1752
                     /locus_tag="VIY07_09230"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY6381971.1"
                     /translation="MVTDWPAGSPGLQSSASRLAERIGAATGGRINIEVFPAGALVSP
                     FETFAAVGAGVADMYHSADYYWEKKSPAFNFFAAVPFGFTANELFAWVQYSGGQELWD
                     ALSGQFNVKPLLCCNTGTQMGGWVSREIPSPEGLKGLRYRMPGLGGQVLRRLGANVVN
                     VPGSEIVQSLRSGAIEGSEWVGPWLDVALGLNKVARYYYYPGFHEPGTGITLGINKRL
                     WESFDASDRRVIEDATAAEYARSLAEFNVNNALWLHKLRDEGAVKILKLPDSVL"
BASE COUNT          308 a          509 c          539 g          396 t
ORIGIN      
        1 caatgactgc cagtgaacgg atatgctgaa gggctctttg cgccaagtgg gaattcgagg
       61 tgaagccatt gctgtttcca acggacctcc cctccttcct cgatctcatt cgccaacacg
      121 gcgatgcagc ctacagcgtc atgttcgcct atgcggcttc gcacagcttg ctgcttgcac
      181 tgttcgcagg ctacgccgcg cattcaggtg cgctgcaatt aggcacactc gtcttggtct
      241 gctggtttgg cagcttcgct ggcgatgcgg tccgcttctg gatcgggcgg cattttggca
      301 cccgcttgct ggggtccttt ccacggcttg cacgcgcggt ccagaccgca gcccggctga
      361 cggatcgtca ttacgtcttg atgatactat tccaccgtta cccgcacgga attcggggtg
      421 tcgcgggctt cgcctacgga atgtcgcggc tgtcctggtc aaccttcctt gtgctcaatt
      481 ttgccgccgc gggcctgtgg tcttgtaccg ttgtctcggc tggctatgta tttggccagg
      541 tctcagagaa gctcatgagc gacgcctcat cgggcattgg ctcggtgatg ctggttatgt
      601 tcctcggcct ctcttggatt ttgagcagaa agcttgagca cgtcgtcgat cgtagctgac
      661 gcgcactagc gagggcgcca ctccaaagaa tgcgagcaag agccgccggg cgtactcgaa
      721 ttccagccta agtattgaaa cgtccaactt ttgcggttct aatgctctct cggtcagccg
      781 gcgcctcggt gaagcggtgg gctggcaggt ttccgtgcat cgggggaaac agccatgagg
      841 cggcgggata ttctggccac cgcgggatca ttggctgcgg gcgcgacctt gaacctccca
      901 gcgcccgcgg tcgcacagaa aattcaaaag ttcaaaatgg tgacagactg gcccgcagga
      961 tcgcccggtc ttcagtccag cgcgtctcgt ttggcggaga gaatcggcgc cgcgaccggg
     1021 ggccgcatca acattgaggt ttttccggcc ggcgcgcttg tttccccatt cgagaccttc
     1081 gccgcggtcg gggccggtgt cgctgatatg tatcactcgg ccgattacta ttgggaaaag
     1141 aagtcgcctg cgttcaattt cttcgcggcc gttcccttcg gcttcacagc gaacgaactg
     1201 ttcgcgtggg tgcagtatag tggtggtcag gaactttggg atgcgcttag cgggcagttc
     1261 aacgtcaaac cgctcctctg ctgcaacact gggacgcaaa tgggcggctg ggtctcccgc
     1321 gaaatcccct cgccggaggg actaaaaggc ctgcgctacc ggatgccagg gcttggcggc
     1381 caagtcctcc gccggttggg cgccaacgtg gtgaacgtgc cgggcagcga aatcgtgcaa
     1441 tcgctccgat ccggtgctat cgagggtagc gagtgggttg gaccctggct cgacgtggcc
     1501 ttaggtctca acaaggtcgc ccgttattac tattatccgg gattccacga gccgggcacc
     1561 ggcataacgc tcggcatcaa taagcgcctg tgggagagtt tcgacgctag cgaccggcgg
     1621 gtcatcgagg acgctactgc agctgagtac gcgcgttccc tggcggagtt caatgtcaac
     1681 aatgcgctgt ggctgcacaa actgcgagac gaaggcgctg tgaagatcct taagcttccc
     1741 gactcggtgc tg
//
LOCUS       DATDHO010000483         8451 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_122564, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000483 DATDHO010000000
VERSION     DATDHO010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8451
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_122564"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..586)
                     /locus_tag="VIY07_09235"
     CDS             complement(<1..586)
                     /locus_tag="VIY07_09235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381972.1"
                     /translation="MSAALGQPAALTPSQSEALNAYNKTVQNFRSILSERRAQINAKR
                     ELPDKPGQDLYLARVAMMGAYKDLTDVLPSRIGKPNKYKIPPAYFDADNEPLIDEYKN
                     LFRIMQAPPANAQASDTPYKDVVDLGTAIGRVKGLDAAHAEVAGRISLAVFFAETDGN
                     QNIGNARSNSYKGSFQTGVSEDKNGQKKWAAIKKS"
     gene            complement(698..1573)
                     /locus_tag="VIY07_09240"
     CDS             complement(698..1573)
                     /locus_tag="VIY07_09240"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEY6381973.1"
                     /translation="MLRLLRVLVLLIAAMLSCAGAHTARAEPVPAHACGREAFRVVVD
                     VGHTAQAPGATSARGVPEFVFNLKLAERIEQQLRDAGFRRSVLLITEGRSRKGLAARI
                     KRANALGADLFLSIHHDSVPNKFLEKWKFEGKERGFSDRFSGHSIFISHDNSDRAGSL
                     QFARLLGGQLRERGLQYTPHYTDRIMGHRQRLLVDAQAGVYRYDQLLVLRDTDMPAVL
                     LEAGSIINRDEELRMGSDEHQTLVSAAAVDAVESFCAMRRPRSPTREASRPGGVSRQA
                     TAPAAVVPVRAIKQR"
     gene            1904..2344
                     /locus_tag="VIY07_09245"
     CDS             1904..2344
                     /locus_tag="VIY07_09245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381974.1"
                     /translation="MVRAIAILAGLASAFPAMAGEMTASEARRFVIGKLFNYACFDGT
                     RGSARVHTDGSVDGSMQAQGTGQMRYGTMPAATLRVEGERVCASLPGSILQPCFYLER
                     TSAESFRGSISGLSFAYCDFVRLEEPTRVVRGPRQKQFSQTTGK"
     gene            complement(2353..2952)
                     /locus_tag="VIY07_09250"
     CDS             complement(2353..2952)
                     /locus_tag="VIY07_09250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381975.1"
                     /translation="MRQYLLTVLFFFALASGACAEVTLTFYSHHFGTYGLGITFPHAY
                     VTLSGKTADAKPVKANFGFTAQTISPSILWESVEGYVISMPDDYIALSKPHLSLPISD
                     QQYRSVLALAERWRKYPQPSYSLDSRNCVTFVKEIAIALGLPASNDIKFIRSPKEFLE
                     DLQLRTAKSNRIVATGRPKQPIAQAQPNSDKSNTVEADN"
     gene            complement(3408..4010)
                     /locus_tag="VIY07_09255"
     CDS             complement(3408..4010)
                     /locus_tag="VIY07_09255"
                     /inference="COORDINATES: protein motif:HMM:NF012976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intradiol ring-cleavage dioxygenase"
                     /protein_id="HEY6381976.1"
                     /translation="MHKLLKPSRRRFLLNTGILAAGWELSRSDAVLSQQLPVTPSCRD
                     GDEPTVRQTEGPFFKPKSPERSDLREPGAGDRSFELSGFVLARSCRPLQGAVIDLWHA
                     DEKGEYDNTGFRYRGHVITGPDGSFRFRTIVPAVYSGRTRHYHVKVQAPSSRLLTTQL
                     YFPNEPANLRDGLFQRELMMRVAETGDGTAGRFDFVLNVR"
     gene            complement(4121..4591)
                     /locus_tag="VIY07_09260"
     CDS             complement(4121..4591)
                     /locus_tag="VIY07_09260"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY6381977.1"
                     /translation="MATRKRKPAQARLKEQAFERHHFNYGRWTKSRFSEAVTVTGPAK
                     MIFLAGIGSEHEQSGKIMHPGDFVAQCRYAYRKLKKVLARNGASMADVVKQVTYVIDA
                     RHQQLAGKCRRQAYGKAPLPAHTFLNVSQLAWPAMLVEIDVIAMVPLRLSDKRA"
     gene            complement(4628..5452)
                     /locus_tag="VIY07_09265"
     CDS             complement(4628..5452)
                     /locus_tag="VIY07_09265"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6381978.1"
                     /translation="MQDDPPIVPARPTSAVGLLQNLVQKLGEPRILGWIAVAFVLIGW
                     EAVVAGARLNPIYLPRPSQILLALITMFKTGGLLSDLLATLARIFGGFVIALVAGTLL
                     GIWMATSERVSAIADNFIAALYPLPKVTLIPLLIIWLGTGGPFMLAISALGAIFPIVI
                     NTVLGIRQCDSGLILAARDLGATNRQVIGMVLLPSAIPSIFAGVRLGLGVSIILVVAA
                     EMVVGKVGLGARLYLAGQVLETEQVFAVLIVLAILGIAVTKAQDLIDVRLNQWRLS"
     gene            complement(5453..6268)
                     /locus_tag="VIY07_09270"
     CDS             complement(5453..6268)
                     /locus_tag="VIY07_09270"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6381979.1"
                     /translation="MTTTGVAIACDDVSFTYSAKSGAPVEALRRVNFRINPHRVTAVI
                     GPSGCGKSTLLQIVRGLLTPSNGRIRFVDTQTNAAVASTPRMATVWQAFNLFPWRTVA
                     DNVAFGLEVAGITRKERIERTRRCLAQVDMVGFEAKHPRQLSGGMRQRVGLARALVME
                     PDVLLLDEPFGALDAQTRLVLQEQLARLVETSGTTAVLVTHSIEEAILLADTIVVMTA
                     RPGRIAAEISVALPRPRSLSTTHLSGYSTLFDQIYRLLRDEVVKAMATETEMA"
     gene            complement(6277..7329)
                     /locus_tag="VIY07_09275"
     CDS             complement(6277..7329)
                     /locus_tag="VIY07_09275"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381980.1"
                     /translation="MNIDRRHLLAGTAALSFVAAAPAAIRAQEKPVKIRIGLVPLISS
                     GPIFIAEARKFFEKVNLDAELKYFADGALAMPALVAGELDLTATTLNAGLFNTVAKGA
                     PFKLMLDRGSEKPGHGSMTIVASNEFYEQGYRSANDGSKLKGKTIAIQAPGSIDQYLL
                     GRAAEKAGLNPKTDLNWSSGMPYPDMIKLMGAGRADAANIPVPLAFLAEKNQVGKIVG
                     PGSDIEPDAQLACWVMSSSYLAANRSAAVRFAMVHTHAARLFNKAAAEKDPDVVKIIS
                     EATKVPAALITAAAPRWTWYTDDGLPNIDSVMAQFKFVSQSMSMVSGQVTPDMLFDLT
                     AAKEATERLKSANPFT"
     gene            7477..8226
                     /locus_tag="VIY07_09280"
     CDS             7477..8226
                     /locus_tag="VIY07_09280"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEY6381981.1"
                     /translation="MTTAITPTGSIEIVDRSSMIAKLNEGVTLRPRETAFVTIDMHRG
                     HLDMEVATMAAKPDDARRVIANAKEILDFARSKGMPIIHVKLVFRKIPGIGSEGMTQP
                     FWHTLHEMVTEEDRLTPGRRSTVDGHNIRGSRGTEIIPELLNDADYVIDNKKRLDCFH
                     GTDLKTLLEILGVKNVILMGINTNTCVLNTAFTAFNHDYCVVVASDCVASMYGDDLHV
                     LGLQNVARCLGWVLSNEDIKTKLEDGAARND"
BASE COUNT         1818 a         2392 c         2462 g         1779 t
ORIGIN      
        1 tggacttctt gattgctgcc catttcttct gaccattttt gtcctcagat acccctgtct
       61 gaaaacttcc tttgtaggaa ttcgagcgcg cattacctat gttttggttg ccatctgtct
      121 cggcaaagaa gacggccaga ctgatgcggc ccgcgacttc ggcatgcgcc gcatcgaggc
      181 ccttgacccg cccaattgcg gtccccaggt cgacgacgtc tttatagggc gtatcagatg
      241 cctgcgcatt ggcgggcggc gcctgcatga tgcggaaaag attcttgtac tcgtcgatca
      301 gcggctcatt gtcggcatcg aaatatgccg gaggaatttt atatttattt ggcttcccga
      361 ttctggatgg cagcacgtcg gtcaggtctt tgtacgcgcc catcatggcg acgcgagcaa
      421 gataaaggtc ttgtcccggt ttatcgggca gctctcgctt cgcattgatc tgggcgcgcc
      481 gctcgctcag gatcgatctg aagttctgta ccgttttgtt gtaggcgttg agcgcttccg
      541 actgcgatgg cgtcagtgcg gcgggctgac ccagtgcggc agaaatgaaa ttgaattttc
      601 cggctccggc cagatatgcg aggccgcaaa gcccgattgc cgccgagaaa cgaggacatt
      661 tcaaaataag cacaagcact cctgccgttg atacgaatca gcgttgtttg attgcccgga
      721 ctggcaccac ggcggcgggc gctgtcgcct gcctcgagac cccgcccggc cggcttgcct
      781 ctctggtcgg agaccgcggc cggcgcatcg cacagaacga ttcgaccgca tcaaccgcag
      841 cggcgcttac cagtgtttga tgctcatccg agcccatccg cagctcctca tcgcggttga
      901 tgatcgagcc cgcttcgagc aagaccgcag gcatgtcggt gtcccgcaac acgagcagct
      961 ggtcgtagcg atagactccc gcttgcgcgt cgaccagcag ccgttggcga tggcccatga
     1021 tccgatccgt gtagtggggc gtgtactgca atccacgctc tcgcaactga ccgcccagca
     1081 acctggcaaa ctggagactg ccggcacggt cactgttgtc atgagagata aaaatggaat
     1141 gaccactgaa gcggtcgctg aaaccgcgct ccttcccctc gaacttccat ttttccaaaa
     1201 acttgttggg cacggaatcg tgatggatcg acaggaagag atcagctccg agagcattgg
     1261 cgcgcttgat gcgcgccgcc aatcccttcc gcgatcgtcc ttccgtgatc aggagcacgc
     1321 tgcgccggaa tccggcgtca cgcagctgct gctcgatgcg ttcggcgagt tttaaattga
     1381 aaacaaactc cgggacgccg cgcgcgcttg tcgcgcccgg cgcctgcgcc gtgtgcccga
     1441 catcgacaac tactcggaat gcctcgcggc cgcacgcatg ggcgggcaca ggttcggcac
     1501 gcgccgtatg cgcaccggca caggagagca ttgccgcaat gagcagcacc aggacgcgca
     1561 gcagccgaag catgatcccg aatcccccga tgtcccctgg gcaatcgcct cacaatatgc
     1621 ccattcgatg gcagcccagc catcgaatcc caatgatgcc gattttgagg cccgccgtcc
     1681 atgcgcctga ttctgcactc acgtcggctt tattgatctc aagggacggc acaaaaggca
     1741 gacgggaggc gagtaccatc caatgcttac gtgttttcaa agccgaaaag gtctgcaagc
     1801 tgctcctgcg gtcgcaaggc tagccatgtg cgcttcgtcc acagtcgcca tgttttaacc
     1861 ataggttacg ggttcgctgc cttcgtcagt agggtggcag attatggttc gtgcgattgc
     1921 gattctggcc gggctggcct ccgcttttcc ggcaatggcg ggtgagatga cagcgagcga
     1981 ggcgcggcgt ttcgttatcg gaaagctctt caactacgcc tgcttcgatg gcacgcgtgg
     2041 ttcagcgcgt gtccataccg acgggtcggt cgatggctcc atgcaagctc aaggcacagg
     2101 ccagatgcgt tatggcacga tgccggccgc cacgttgcgc gtcgagggcg agcgggtctg
     2161 cgcgtcgctg cctggctcga tcttgcaacc gtgcttttac ctggagcgca ccagcgccga
     2221 gagcttccgc ggctcgattt cgggactaag cttcgcctat tgcgatttcg tacggcttga
     2281 ggagcctacc cgcgtcgtgc gtggcccacg ccaaaagcaa ttttcgcaaa ctaccggcaa
     2341 ataaccggcc tatcaattgt ccgcctctac ggtgttcgac ttatcactat tcggttgcgc
     2401 ctgcgcaatt ggctgtttag gtctccctgt cgcgacgatc cggttgctct tggcagtccg
     2461 caactgcaga tcttccagga attcctttgg actgcgaatg aacttgatgt cgttgctggc
     2521 aggaagcccg agcgcgatag cgatttcctt tacgaacgtc acgcaattgc gtgaatcaag
     2581 actgtaagag ggctgaggat atttccgcca acgttccgcg agggcaagca cagagcgata
     2641 ttgctgatcg ctgatcggga gcgaaaggtg cggcttgctc aacgcgatat agtcgtccgg
     2701 catcgagatg acataacctt ctaccgactc ccaaagtatg gaaggcgaga tcgtctgagc
     2761 cgtgaagccg aaattggcct tcacgggttt ggcgtccgca gtctttccac tgagcgtgac
     2821 ataggcgtgg ggaaatgtga tgcccaatcc ataggtgcca aaatggtgcg aatagaatgt
     2881 cagcgtgacc tcggcacatg cgccggaagc caaggcaaag aaaaacagta ccgtcagcag
     2941 atattgacgc actcgaaata tccccccgac agtttcgatt agcgcccccg acagccaacc
     3001 aaattctttc aacaaaaacc gagagcgtag acgatagctg ccgctggccg gcaggatgcg
     3061 taataaatta cctctagtca aagagcgcgc caagttgctg gggaagtgtg gcctttctgc
     3121 actagttata aattcaagaa tgatgacgat actgacctgc gcatttcgaa cgggggtgct
     3181 ccatgagaaa attgttggcg gccgtgtgtt gtgtaattct cgcctttggg cttgctgggt
     3241 gcgtaggcaa aggcaaggct ccggttggca aaggcaaagc ccccgttgtt cagaccaggg
     3301 gctgattcaa atcggtccac ggtgagttca ccttaagaag ccctggctgc aaagccgggg
     3361 cttctgccgt cttggcgtcc cactttggct gcgcgtgcga tggcgtgcta acgcacattg
     3421 aggacgaaat cgaaccggcc ggcggtccca tcgccagttt ccgcaactcg catcattaat
     3481 tcgcgctgga ataacccgtc acggaggttc gccggctcat tgggaaagta aagttgcgtg
     3541 gtcaatagac ggctgctcgg cgcttgaacc ttgacgtgat aatgcctcgt gcggccggag
     3601 tagaccgccg gcacgatggt gcgaaaacgg aacgagccgt ccggcccagt gatgacatgg
     3661 ccccggtatc ggaagccggt gttgtcgtat tcgcccttct catctgcatg ccagagatcg
     3721 atcaccgccc cctgaagcgg gcggcagctt ctggccaaca cgaagccgga aagttcgaac
     3781 gaacggtctc cggcgccagg ctcgcgcagg tcactgcgct ctggcgactt tggtttgaaa
     3841 aacggcccct cggtctgacg cacggtcggt tcatcgccat cgcgacagga aggcgtgacc
     3901 ggaagctgct gcgagagcac tgcgtccgaa cgggacagtt cccaccccgc ggcaaggatg
     3961 ccggtattga gcagaaatcg gcgacgactc ggtttcaata gtttgtgcat cgacacaacc
     4021 gggttgttga tccgcgagcc ccacagcctg gcggttctcg gtcctgggac gttactgcga
     4081 ctttgaagaa atgttcaaac aaagctatgt gatcgcgaat tcacgcgcgc ttgtcggaga
     4141 gcctaagagg caccattgcg atcacgtcaa tctcgacgag catagcaggc catgcgagct
     4201 ggctgacgtt gaggaatgtg tgcgccggca acggcgcttt gccatatgct tgtcggcgac
     4261 atttgcccgc cagttgttga tgccgtgcgt cgatcacata ggttacttgc ttgacgacgt
     4321 cggccatgct ggcgccattg cgcgccagca cttttttgag cttgcggtag gcgtaccggc
     4381 attgcgcgac aaaatcgccg gggtgcatga tcttgccgct ctgttcgtgc tcggaaccga
     4441 tgccggccag aaagatcatt ttggccggcc cagtaactgt cactgcttcg gaaaagcggc
     4501 ttttggtcca acggccgtag ttgaaatgat gcctttcgaa agcctgctct tttagacgtg
     4561 cttgagctgg tttgcgtttg cgggttgcca tgaaaactcc tcaataacct gggcgagcct
     4621 cggagcttta cgatagtcgc cactggttga gccgcacatc aatcaagtcc tgtgccttgg
     4681 tgaccgctat gccaaggatg gcgaggacga tgaggactgc aaagacctgc tcagtctcca
     4741 ggacttgtcc tgcgagatag agccgcgcac ccaatccgac cttgcctacc accatttcag
     4801 cggcgacgac caaaatgatt gagactccaa gaccgagccg aacaccggcg aatatcgatg
     4861 gaatcgccga cggcaataga accatgccaa taacttggcg gttcgtggcg ccaagatcac
     4921 gtgctgcgag aatgagaccg gaatcgcatt gacggatgcc gagcacagta ttgatcacga
     4981 tgggaaagat ggcgcccaac gctgaaatgg ccagcatgaa aggcccgccg gtaccgagcc
     5041 aaatgatcag tagcgggatc agcgtgacct ttggcagcgg ataaagggca gcgatgaagt
     5101 tatcggcgat ggcgctgacg cgttctgacg ttgccatcca tattccaagc agcgttccag
     5161 cgaccagggc gataacaaat cctccgaaaa tgcgcgccaa cgtagccaag aggtcgctaa
     5221 gcaacccgcc agtcttgaac atcgttatca gcgctaacaa aatttggctg gggcgcggca
     5281 aatagatcgg attgaggcgc gcgccggcga ccacggcttc ccaaccaatc aagacaaagg
     5341 caactgcaat ccaaccaagg atgcgtggct cccccagctt ttgtacaaga ttctgaagaa
     5401 gcccgaccgc tgatgtgggc ctcgccggta caatcggagg atcatcttgc atctacgcca
     5461 tctcagtttc ggtcgccatt gctttgacaa cctcgtctcg aagaaggcga tagatctggt
     5521 cgaacagagt cgaatagccg ctcagatgtg tggttgagag cgaacgtggc ctcggcagcg
     5581 caacactgat ctcggccgca atgcggccgg gacgggccgt catgaccacg atggtgtcgg
     5641 ccaaaagaat ggcttcttct atggagtggg tgaccagcac cgccgtcgtg ccgcttgttt
     5701 cgaccagccg ggcaagctgc tcctgcagca cgagccgcgt ttgtgcgtcg agcgcgccaa
     5761 atggttcgtc aagcagcagg acatcgggct ccatgaccag agctctcgcg agtccaactc
     5821 gctggcgcat accgcccgag agctgacgcg ggtgcttggc ttcaaagcca accatatcaa
     5881 cctgggcaag gcagcgccgc gttcgttcga tgcgctcttt gcgtgtgatg ccggcaacct
     5941 caaggccaaa ggcgacattg tcggcaacag tgcgccacgg gaatagattg aaagcctgcc
     6001 acaccgtggc catgcgcggt gtgctggcaa ctgcggcgtt agtctgagtg tcaacaaagc
     6061 gaattcggcc gttactgggc gtgagcaacc ctcggacaat ttgcaacaag gtgcttttgc
     6121 cgcaaccact cggtccgatc accgccgtca ctcggtgagg attgatgcga aaattgacgc
     6181 ggcgaagcgc ctcaaccggc gctccggact tggcgctata cgtgaagctg acgtcgtcgc
     6241 atgcaatggc gacgcctgtc gtagtcacgc cgctgctcac gtaaacgggt tggcggattt
     6301 cagccgctcc gtagcttctt tggccgcggt cagatcgaac aacatgtcag gggtcacctg
     6361 gccgctgacc atgctcatgg actgcgacac gaatttgaat tgagccataa ccgagtcgat
     6421 gtttggaagc ccatcgtcgg tgtaccaggt ccaacgcgga gctgcggcag taatcaaggc
     6481 agccggcacc ttggtggctt ccgaaatgat tttgactacg tccgggtctt tctcagccgc
     6541 cgctttgttg aacaagcgtg cggcatgggt gtgcaccatc gcaaaccgca ccgccgccga
     6601 tctgttggca gccaaatatg aactcgacat gacccaacat gcgagttggg cgtcaggctc
     6661 gatgtcagag cccggcccga cgatttttcc aacctgattc ttttcggcaa ggaaggcaag
     6721 cggcaccggg atgttcgcgg catcggcgcg cccggcgccc atgagtttga tcatgtccgg
     6781 gtaaggcatg ccggacgacc agttcaggtc tgttttcgga ttgagccctg ctttttccgc
     6841 agcgcgcccc aacaggtact ggtcgatgct gcccggggct tgaatcgcga tcgtcttgcc
     6901 tttgagtttt gaaccgtcgt ttgccgaacg atagccctgc tcatagaact cattgctggc
     6961 gacgatcgtc attgagccgt ggccgggttt ttcgctgccc cggtcgagca tcagtttgaa
     7021 aggtgcgcct ttggccaccg tattgaaaag cccggcgttc aatgtcgttg cggttaaatc
     7081 gagctcgccc gccaccagtg ccggcatggc aagggctcca tctgcgaaat atttcaattc
     7141 cgcatcaaga ttgaccttct cgaagaattt tcgggcttct gcgatgaata tcgggccgga
     7201 cgaaatgagc ggcaccaggc caattcgtat ttttacgggt ttctcttgcg cgcgaatagc
     7261 ggccggggcg gcggcgacga acgacagcgc ggcggtgccg gcgagaagat ggcggcgatc
     7321 gatattcatg gttgtcctcc agtccaaaag gcggcgtggc cgccatgcac ccacgggttt
     7381 tccctcaggg tccggcatga gcattcggat tgtcaagttg ggtgatacgc gacaaaatga
     7441 atgctcagcc aacaagcagc gcggaggata cgagttatga caaccgcgat tacacccacc
     7501 ggatcgatcg aaatcgtcga ccgttcctca atgattgcaa aactgaatga gggggtgacg
     7561 cttcggccgc gagaaacggc gttcgtcacc atcgacatgc accgcggcca cctcgacatg
     7621 gaggtcgcca ccatggccgc gaaacctgat gatgccaggc gcgtgattgc aaacgccaaa
     7681 gagattctgg atttcgcccg ctcaaaagga atgccgatca ttcacgtcaa gctggtgttc
     7741 cgaaagattc cgggcatcgg aagcgaaggg atgacgcagc ctttctggca cacgctgcac
     7801 gaaatggtga ccgaagaaga tcgccttacc cccggccgtc gcagcactgt cgacggccat
     7861 aacatcaggg gatcacgagg taccgaaatc attcccgaac tcttgaacga tgccgattac
     7921 gtcatcgaca acaagaaaag gcttgattgt ttccatggca ctgatctgaa gaccctgctc
     7981 gagattctcg gcgtcaagaa cgtgatcctg atgggaatca acaccaatac gtgcgtgctg
     8041 aacaccgcgt tcacggcgtt taatcacgac tactgtgtgg tcgttgcttc ggactgcgta
     8101 gccagcatgt acggcgatga tcttcacgtg ctgggacttc agaacgtggc caggtgtctc
     8161 ggatgggtgc tctcgaacga agatatcaaa acgaagctcg aagacggcgc cgctcgcaat
     8221 gattagctgc tacgaggcaa aggcgaagtg tggatgaatg cgggttcttg ggcttgagtg
     8281 cttgatcgca gaaaagcact caagcccggc gagatgatcg tgagtaaaga cagacttgtt
     8341 acgcgacgca gtgaccgccc ttaagcgcag gaaaaggcga gggggtaatg agcagcgatg
     8401 gcgggctaga cgggcttcag aaacgattac gcgtcttcca cgcttcgtat g
//
LOCUS       DATDHO010000484         3425 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_271085, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000484 DATDHO010000000
VERSION     DATDHO010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271085"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1105
                     /locus_tag="VIY07_09285"
     CDS             <1..1105
                     /locus_tag="VIY07_09285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381982.1"
                     /translation="AALPPWSRHMVVACFRAIGPKAGYPATFSNGTPMVSSQSLLSEE
                     RHKDNVPLAPGTTPVTARLGWAAADTETPQQVDVTAEESCPSAPAQMPEEIPQDAPGI
                     QAASVVSEKTLDLINQLDALAGDLAAGRHTSPDEPAGNVRDEPDVRAELPGMEPSIRV
                     SPPPSSFQKDLFAGNKPPVGRRTMLTLAGCCVAALIGVAVASQSQRLWTSEISAGPTQ
                     EPASSTGQAPSTTAVQQPVPVAQTASLAATPTPEVVKQLETMAQDLAVVRRSLEQLSA
                     KQEQLAAAQQQLEQLATKQEQLAGKQEQMAQNIAKLQAPEQNTRRRMSSPPTQARPAP
                     IPPRVTQEPTAQVSSAPRPEPSHPVPPLPIPPR"
     gene            1327..2286
                     /locus_tag="VIY07_09290"
     CDS             1327..2286
                     /locus_tag="VIY07_09290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6381983.1"
                     /translation="MLTRRNALTDTITAGAVMRTRTGFAKASQPATPINFDVPENACD
                     CHTHIHADPEQFPLFTGRVYTPELASPEEMSALHRALKVKRVVIVTPSVYGTDNSATL
                     FGMKARGADARGVAVIDDRTSESDLDAMGSAGIRGIRLNLATGGGNDPSVGRQRFQTA
                     VDRMKTRGWHVQMYTNLAVISGIKDLVQTSPVPVVFDHFGGVQAALGLEQPGFADLAE
                     LVRSGKVYVKISGAYRVSKKAPDYEDVTALAKALIAANADRIVWGTDWPHPNSSSGNK
                     PTELTPLFQIDDGRLLNQLAVWAPDAATRKKILVDNPGRLYQF"
     gene            2335..2982
                     /gene="pncA"
                     /locus_tag="VIY07_09295"
     CDS             2335..2982
                     /gene="pncA"
                     /locus_tag="VIY07_09295"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HEY6381984.1"
                     /translation="MTDTLRVADHDVFLVVDVQNDFCPGGNLAVPRGHEVVPLINMLA
                     GKFAHVVLTQDWHPHGHLSFASSHSGKKEFQAIEANYGTQILWPDHCVQGTDGAAFRT
                     DLEIPHAQLVLRKGYHREIDSYSAFYENDRKTATGLAGYLRERGFARIFVAGLAFDFC
                     VRYSCEDARRQGFDVVVIEDACRSIDVDRSATATRDQFRSLGIPCALAEHITRVK"
     gene            complement(3046..>3425)
                     /locus_tag="VIY07_09300"
     CDS             complement(3046..>3425)
                     /locus_tag="VIY07_09300"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEY6381985.1"
                     /translation="TPGCWVAAAPSTATCDGLTLWGRVGYLVQPNLLFYAQGGAALTQ
                     ADLTVFDSTGAQVGELSKNKTGWTVGGGVEWMFVPRWSVFLEYNFMGFGTRSATVVGC
                     GGTCAFTGKADIQNVLAGVNYKF"
BASE COUNT          739 a         1069 c          968 g          649 t
ORIGIN      
        1 tgctgccctc ccgccttggt ctcgtcacat ggtggtggcc tgttttcgcg caatcgggcc
       61 aaaggccgga taccccgcaa cgttctcaaa tggaacgcca atggtttcct cgcagagtct
      121 cctcagcgaa gagcgtcaca aggacaatgt gccgcttgca cccggaacga caccagtaac
      181 ggcccgactc gggtgggccg ccgccgatac ggaaacgccg cagcaggttg acgtcaccgc
      241 cgaagaatcg tgcccttcag cccctgctca aatgcccgaa gagataccgc aagacgcgcc
      301 cggcattcag gctgcctcgg ttgtttcgga aaaaaccttg gatttaataa atcagcttga
      361 tgccctagcg ggcgatctgg cagcggggag acacacgtct ccggatgagc cggcgggaaa
      421 cgtgcgggac gaacctgacg tccgcgccga gttgccaggc atggagccgt ccattcgcgt
      481 ctcacctcct ccttccagtt tccaaaagga tctattcgcc ggcaacaaac cgccggtcgg
      541 caggcgaacg atgctcaccc ttgcaggttg ttgcgtggcg gctctgattg gagtggcggt
      601 cgcgtcccaa tcgcagcgtc tctggaccag cgagatcagc gcagggccaa cgcaagagcc
      661 cgcttcctct acgggtcagg cgccatccac gacggcagtc cagcagccgg tgcccgtcgc
      721 acaaacagca tcccttgcgg ccacgccgac tccggaagtg gtgaagcagc ttgagacaat
      781 ggcgcaagat cttgccgtcg tacggcgcag cctggagcaa ctctccgcca aacaagagca
      841 gcttgccgcc gcacaacaac agcttgagca gcttgccacc aagcaagagc agcttgccgg
      901 caaacaagag cagatggcgc agaacatcgc gaaactccag gctcccgagc agaacaccag
      961 gcggaggatg tcgtccccac caactcaagc gcgaccagcc ccgatcccgc cccgcgtcac
     1021 tcaggaaccg acggcgcagg tatcgtcggc gccccgcccg gagccttctc atccggtgcc
     1081 gccgttaccc atccctccac ggtgatagac ctgtgggcgc tgagcaccgt cggtcaggct
     1141 ctggatacgg accgaaaacc ggacattgcg cggcgccttc caaggcaatt cagctaagtc
     1201 atcactttga agcaccggtt ctcgcctgct tgcctattca cgcctgcctg cgagactagc
     1261 ctgaaagcag gatgctcaag aggataagag cgtccggccg ttattcgaaa ccgcactcaa
     1321 gctatgatgc tgacgcgccg caatgcgctg acggacacaa tcaccgccgg agctgtcatg
     1381 cgcacacgga caggatttgc caaagcctcc caacctgcaa caccaatcaa tttcgacgtt
     1441 cccgaaaatg cgtgcgactg ccacacgcat atccacgccg acccggaaca attcccttta
     1501 ttcacgggcc gcgtctatac ccccgaactg gcatcccctg aagaaatgtc agcgttgcat
     1561 cgtgcgctga aggtcaagcg cgtggtgatt gtgacgccga gcgtatatgg gactgacaat
     1621 tccgccaccc tttttggcat gaaagcgcgt ggcgctgacg cgcgcggcgt ggcagttatc
     1681 gacgacagga cgagcgagag cgatctcgat gcgatgggca gcgccggcat ccgtggcatc
     1741 cggctcaatc tcgcgaccgg cggcggcaac gaccccagcg tcgggcgtca acgcttccag
     1801 accgccgtcg accggatgaa aactcgcggc tggcacgtcc agatgtacac caacctggcg
     1861 gtaatctccg ggataaagga cctggtgcag acttcgcccg ttcccgtggt cttcgaccat
     1921 tttggcggcg ttcaggcagc actcgggctt gaacagcctg gtttcgcaga ccttgccgag
     1981 ctggttcgtt ccggcaaggt ttatgtcaaa atttccggcg cttatcgtgt atcgaagaaa
     2041 gcgcccgact atgaggacgt cacagcgctc gccaaggcat tgattgctgc caacgcggat
     2101 cggattgtgt ggggtacgga ctggccgcat cccaactcat cgtctggcaa caagccgacg
     2161 gagcttactc ccttgttcca gatcgacgac gggcgccttc tgaatcagct ggctgtctgg
     2221 gcgcccgatg ccgcgacacg caagaagatc ctggtcgaca accctggacg actctaccag
     2281 ttttgagtgt acgctgtacg cctgatacgt cggggggcgc ggaggagcag cgctttgacc
     2341 gatactctga gagtggctga tcacgacgtc tttctggtgg tcgatgttca aaatgacttc
     2401 tgcccgggcg gcaacctggc ggtgccgcgt ggacatgagg ttgtaccgtt gatcaacatg
     2461 ttggcgggaa aattcgccca cgtcgtgttg acgcaggatt ggcacccgca tggtcacttg
     2521 tcgttcgcgt catcacattc aggaaagaaa gaatttcagg cgatcgaggc caattacggc
     2581 acacagattc tgtggcccga ccactgcgtg caagggacag acggcgccgc gttcaggacg
     2641 gacctggaga ttccccatgc tcagctggtc ttgcgcaagg gatatcatcg cgaaatcgac
     2701 tcctattccg cgttctacga aaatgaccgc aaaaccgcga ctggactggc tggatattta
     2761 cgcgaacgtg gcttcgccag aatctttgta gccggcctcg ccttcgattt ttgtgttcgc
     2821 tattcgtgtg aagacgcgcg gcgtcaaggc ttcgacgtgg ttgtgatcga agatgcctgc
     2881 cgcagcattg acgtggatcg atctgcgacc gcaaccaggg atcaattcag atcgctcggc
     2941 ataccctgcg ctctggcaga acacataacg cgagtaaaat aattaaagga ccccgagccg
     3001 aggcccaggg gtccgttgat ttttctgacc gcgttttatt gttgtctaaa atttatagtt
     3061 cacaccagcc aggacattct ggatgtcggc cttgccagta aacgcgcacg tgccgccaca
     3121 acccacaacg gtcgcacttc gcgtgccgaa gcccatgaag ttgtattcaa gaaagaccga
     3181 ccagcgcggt acgaacatcc attcgacgcc gcccccgacc gtccatccgg tcttgttctt
     3241 ggagagttcg ccaacctggg cgcccgtact gtcgaaaacc gtgagatccg cttgtgtcaa
     3301 agccgcgcca ccctgcgcgt agaacagcag gttaggctgc acgagatagc cgacacgacc
     3361 ccaaagtgtc aaaccatcgc acgtggccgt cgacggtgcc gctgccaccc aacaacccgg
     3421 ggtca
//
LOCUS       DATDHO010000485         3013 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_465429, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000485 DATDHO010000000
VERSION     DATDHO010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3013)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3013)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3013
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465429"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1108
                     /locus_tag="VIY07_09305"
     CDS             <1..1108
                     /locus_tag="VIY07_09305"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY6381986.1"
                     /translation="YFTMPVHPMERDWSQTLCEDREAIILADKLGFYDAFVGEHLTDA
                     CENITNSMMFLATLIHDTKTIKLATGTTNLAQMHPVVIAVNAAMFDHLSQGRFVMGVS
                     PGALTSDSEAIGILDEDRNKIFGEAIDVILAVWERNPPYDIDFPDNRFKVGFARTAAL
                     ELGVGILAKPFQKPRPEIVGTVVAPFSPGVVLMGRRDFHPLSANFLLSKHLKSHWANY
                     VKGKAEAGAKAEIADWRVARTIFVADDDKVAKRYGHDDPRSPYRFYFQQMRAKMKRGN
                     RLYVFKSYKEQPEEEITDDYVIDNCVTFGTVNKVVDEILKLREETGDFGELVYAGLDW
                     VDPTLAKRSMQLMAEQVIPRVNAAIGKPAKTAAE"
     gene            complement(1217..2500)
                     /locus_tag="VIY07_09310"
     CDS             complement(1217..2500)
                     /locus_tag="VIY07_09310"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEY6381987.1"
                     /translation="MMSREQNDQLCRVGPGSFMGKLFRRYWAPFLLTSEIPAPDCPPV
                     RVKLMGESLICFRDSKGRIGLIDEFCAHRGVSLWFGQNEECGLRCPYHGWKYDVTGQC
                     VDLPSEREESGFRKNIKLKSYSCIEKAGIIWAYMGPPALQPPPPALEWTDVAPPQRFV
                     SKRLQECNYLQAMEGGIDSSHVSWLHGSELNKDPLFKGSKGNVYNEQDRMPLFEVEEF
                     PGGLLIGARRNADGGKYYWRITPWIIPWYSIIPPRAGHPLGAHAWVPIDDETCWAWSI
                     NYHPTRALTKSEVSAMQDGEGIHVKYVPGTFIPLANKSNNYLLDREAQRHGHSSTGVD
                     GIAMQDASIQESMGAIQDRTKEHLCATDSGIIMTRKILLRAAKAAAEGGVVPATDPES
                     QRVRSASIELDQGVPFTEGARHGLYAAIGTDPISV"
     gene            2588..>3013
                     /locus_tag="VIY07_09315"
     CDS             2588..>3013
                     /locus_tag="VIY07_09315"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: protein motif:HMM:NF016084.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEY6381988.1"
                     /translation="MPLPRIAIATGDPAGIGPEIALKAVLDPGVRRLCRPLLVGDPAA
                     VELHARCANLSPDLRVVERIADADWNNGAVNLLDARDGTNTRLKLGTIDAAYGRASLA
                     SASRAIKAALAGDVDAVVAAPQTERSIAAAGIAFDGYPSF"
BASE COUNT          611 a          914 c          893 g          595 t
ORIGIN      
        1 ctacttcacc atgcccgtgc acccgatgga acgggactgg tcccagacgc tgtgcgagga
       61 ccgcgaggcg atcattctcg cggacaagct tggcttctac gatgccttcg ttggcgaaca
      121 tcttaccgac gcctgcgaga acatcaccaa cagcatgatg ttcctggcca cgcttattca
      181 cgacaccaag actatcaagc tcgcgaccgg caccaccaac ctggcgcaaa tgcatccggt
      241 cgtgatcgcg gtgaacgccg caatgttcga ccatctatcg cagggtcgct tcgtgatggg
      301 cgtaagcccc ggtgccctga cctcggattc cgaggcaatc ggaatcctgg acgaagatcg
      361 caacaagatt ttcggcgaag ccatcgacgt gattctagcg gtgtgggaac gaaacccgcc
      421 ctacgacatc gattttccgg acaatcgctt caaggtggga tttgcgcgga cagctgcgct
      481 tgagcttggc gttggcattc tggcgaagcc gttccagaaa ccgcgcccgg aaatcgtggg
      541 taccgtagtc gcgccatttt cgcccggcgt ggtgctgatg ggcagacgcg atttccatcc
      601 gctgtcggca aacttcctgc tatcgaagca cctgaagtcg cactgggcca actacgtcaa
      661 aggcaaagcc gaggccggag ccaaggcgga gattgccgat tggcgcgtgg cacgcacaat
      721 cttcgtcgcc gacgatgaca aggtggcgaa acgctacggc catgacgacc ccaggagccc
      781 gtaccgattt tatttccagc aaatgcgcgc caagatgaaa cgcggcaatc ggctgtacgt
      841 attcaagagc tacaaggaac agcctgaaga agaaatcacc gacgattacg tcatcgacaa
      901 ttgcgtgacc tttggcaccg tcaacaaggt tgtcgatgaa atcctcaagc tgcgcgagga
      961 gaccggcgac ttcggcgagc ttgtctatgc cggtctcgac tgggtcgatc cgacgctggc
     1021 caagcgctcg atgcagctga tggcggagca agtgattccg cgcgtgaatg cggcaatcgg
     1081 caagccggcc aaaaccgcag cggaataaaa agcacgctct agcaatttat catgcccggc
     1141 cttgtgccgg gcatccacgt cttatctgct tctcaaaacg tggatggccg ggacaagccc
     1201 ggccatgacg aaagcatcac accgaaatcg gatcggtccc gatcgctgcg taaagtccat
     1261 gtcgggcgcc ttcggtaaac ggcactccct ggtcgagctc gatcgatgcc gaacgaacgc
     1321 gttgcgactc ggggtctgtc gccggcacta cgccgccttc ggcggcggcc tttgctgcgc
     1381 gcagcaagat cttgcgcgtc atgatgatgc cgctgtcggt cgcacacaga tgttccttgg
     1441 tgcggtcctg aatcgctccc atgctctcct ggatcgaggc atcctgcatc gcgatgccgt
     1501 cgacgccggt cgacgagtga ccgtggcgct gtgcctcgcg gtccagcaga taattgttcg
     1561 atttgttggc aagcggaatg aaagtgccgg ggacatattt gacgtggatc ccctcgccgt
     1621 cctgcatggc cgagacttcc gatttcgtca gcgcgcgcgt ggggtgataa ttgatgctcc
     1681 aggcccagca cgtctcgtca tcgatgggca cccaggcgtg cgctcccaaa gggtggccgg
     1741 cgcgcggtgg aatgatcgaa taccagggta tgatccaggg cgtgatgcgc cagtagtatt
     1801 tgccgccgtc agcattgcgg cgcgctccaa tcagcaaccc gcccggaaat tcctcgactt
     1861 cgaacagtgg catgcggtcc tgttcattgt agacgttgcc cttcgagcct ttaaacaacg
     1921 ggtccttgtt gagctcgctg ccgtgcagcc acgatacgtg gctggaatca attccgcctt
     1981 ccatggcctg aaggtaattg cattcctgca gacgcttgga aacgaagcgc tgcggcggtg
     2041 caacgtctgt ccattccagc gccggtggcg gcggctgcag cgcgggcggc cccatatagg
     2101 cccatatgat tccggccttc tcgatgcagg aataagactt cagttttatg ttcttgcgga
     2161 aaccgctctc ttcacgctct gagggcagat cgacgcattg gccggtgaca tcatatttcc
     2221 agccgtggta cggacagcgc agcccgcact cctcgttctg gccaaaccac agcgaaacgc
     2281 cgcggtgggc gcagaactcg tcgatcaggc cgatacgtcc tttgctgtcg cggaaacaga
     2341 tcagactttc gcccatcagc ttgacgcgga ccggcggaca atcgggcgca gggatttccg
     2401 acgtcaggag gaacggcgcc cagtaacgtc gaaacaactt gcccatgaac gatcccggtc
     2461 cgacgcgaca aagctgatcg ttttgttcac gcgacatcat ggcgacgttt ccctgctcgc
     2521 ttgctatgat tgttgcggca cgagccggca ttataggcgg ccgtgccgga gacggaagtc
     2581 gagtgccatg cctctaccgc gtatcgccat tgcaaccgga gacccggcag gaatcgggcc
     2641 ggagatcgcg ctcaaggccg tgctcgatcc gggcgtgcgc cgcttgtgcc ggccattgct
     2701 ggtcggcgat ccggccgcgg tcgaattgca tgcgcgctgt gcgaacctgt cacccgatct
     2761 tcgcgtggtc gaaaggattg ccgatgcgga ctggaacaac ggcgcggtca atctgctcga
     2821 tgcccgcgac ggcaccaaca cgcgtctaaa attgggcact atcgatgctg cctacggccg
     2881 cgcatcgctt gcgagcgcaa gccgcgcaat caaggcggcc ctggccggag acgtagatgc
     2941 tgtcgtcgcc gcaccgcaga ccgaacgctc gattgccgcg gcaggcatag ccttcgacgg
     3001 ttatccgtca ttc
//
LOCUS       DATDHO010000486         2023 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_23204, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000486 DATDHO010000000
VERSION     DATDHO010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2023)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2023)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2023
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23204"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..872
                     /locus_tag="VIY07_09320"
     CDS             <1..872
                     /locus_tag="VIY07_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6381989.1"
                     /translation="IMAVVYGATGNVSIGGLFLGGVAPGIFVGIGLMIYSHFFGPVGF
                     KRKRATFGEFSNATKEAAVPLMIPVIIMGGILTGQFTPTEAGIIAVAYIVFVAIPLLN
                     FRHLPNLPRDMAMTGLLYSIPLITIGAASAFGWMLAYLRGPAVVSDWIAKAAGGDPFM
                     IMLLLTLLFVIVGDFIDAVPAIIIFMPLIIDLTKNADINPVHMGVVIITTLAFGLITP
                     PYGLCLLMASKFVGIKFSKAMLASLPIYIVFFVAITFTIFFPDVVLWLPKHLLPASVG
                     CFPNPNGPGYICP"
     gene            882..1724
                     /locus_tag="VIY07_09325"
     CDS             882..1724
                     /locus_tag="VIY07_09325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6381990.1"
                     /translation="MPPVDSTLAPKLKAPAGTCDTHMHVYDAKYPTASTAKFVPPDAP
                     VAAYRKMCARLGIERTVVVQPSTYGKDNRCALEAVAAIGPNARCIVVVDESVTDAELE
                     RLTRLGARGIRFFMLPGAPLPWEILETMSARVAPFGWHVQLQLDGRDLPERDAVLKRL
                     TSTLVVDHVGKFLEPVPLDHPGFRVLQGLVDRGRTWIKLSAPYEVSKAGPPNYDDVGK
                     LAKALAKSAPERMLWATNWPHPTPGAPVPDDAWMLDMLLDWIPDEAARNKALVDNPAR
                     LYGF"
     gene            complement(1730..>2023)
                     /locus_tag="VIY07_09330"
     CDS             complement(1730..>2023)
                     /locus_tag="VIY07_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6381991.1"
                     /translation="EIDSAPGHSPGHVFFKLESKGQRAAFIGDVWHHLLQVYYPDWNF
                     QKNSDAAQARVSRRKVLDYCASSGALVFPAHVGLPFAGHVEKTAKGYQPNFPA"
BASE COUNT          362 a          609 c          620 g          432 t
ORIGIN      
        1 gcatcatggc ggtggtgtat ggcgcgaccg gcaacgtgtc gatcgggggc ctgttcctcg
       61 gtggcgtggc gccgggcata ttcgtcggca tcgggctgat gatctacagc catttcttcg
      121 ggccggttgg tttcaaacgc aagcgagcga cgtttggtga gttttcgaat gcgaccaagg
      181 aagccgccgt gccgttgatg attcccgtca tcatcatggg cggcattctg accggccagt
      241 ttactccaac cgaagccgga atcattgcag tcgcctacat cgtgttcgtt gcaattccgc
      301 tgcttaattt ccgtcatttg ccgaacctgc cgcgcgatat ggcaatgacg ggactgctct
      361 attccattcc gctcataacc atcggcgccg cttcggcctt cggctggatg ctcgcctatc
      421 tgcgcgggcc ggcggtcgtg tcggactgga tcgcaaaagc cgcgggcggc gatccgttca
      481 tgatcatgct gctgctaacg ctgctcttcg tcatcgtcgg cgattttatc gacgccgtgc
      541 cggcaatcat tattttcatg ccgctgatca tcgacctcac caagaacgca gatatcaacc
      601 cggtgcacat gggcgtcgtg atcatcacca ccctcgcctt cgggctgatc acgccaccgt
      661 atggactatg cctgctcatg gcgtcgaaat tcgtcgggat aaagttttcc aaggcgatgc
      721 tggcgtcgct gccgatctac atcgtgttct tcgtggcgat cacattcacg atctttttcc
      781 cggacgtcgt actttggctg ccgaagcacc tgttgccggc ttcggtcggc tgttttccga
      841 acccgaacgg tcccggctat atctgcccgt agatactcgc aatgccgcct gtcgacagca
      901 cgctcgctcc gaagctcaag gcgcctgccg gcacctgcga cactcatatg catgtctacg
      961 acgcgaaata tccgacggct tcgacggcga agttcgtgcc gcccgatgca cctgtggcgg
     1021 cgtatcggaa aatgtgcgcg cgtctgggta tcgagcgcac ggtagtcgtg cagccctcga
     1081 cctatggaaa agacaaccgc tgcgcgctgg aggcagtcgc ggcgatcggc ccgaatgcgc
     1141 gctgcatcgt cgttgttgat gaaagcgtga ccgatgcaga actcgagcgg ctgacaagac
     1201 tcggtgcgcg agggatccgc ttcttcatgc tgccgggcgc gccactaccc tgggagatcc
     1261 tcgaaacaat gtcggcgcgg gtcgcgccgt tcgggtggca tgtgcagctg caactcgatg
     1321 gtcgcgacct tcccgaacgc gacgcggtgc tcaagcgcct gaccagcacg ctggtggtcg
     1381 accacgtagg aaaatttctt gagccggtgc cgctcgatca ccccggattt cgggttctgc
     1441 agggcctcgt ggatcgcggc cgcacgtgga tcaagctgtc cgcaccttac gaagtgtcga
     1501 aggcggggcc gccgaattac gacgacgtcg gcaagctggc gaaggcgctg gcgaaaagcg
     1561 cgccggagcg gatgctgtgg gccaccaact ggccgcatcc gacccccggc gcgccggtgc
     1621 cggacgacgc ctggatgctc gatatgctgc tcgactggat tccggatgag gccgcgcgca
     1681 acaaggcgct cgtcgataat ccggcgcggc tttacggatt ttaggcgggt cacgccggaa
     1741 aatttggctg atatcctttt gcggtttttt ccacatggcc ggcaaatggc aggccgacat
     1801 gagctggaaa caccagcgcc ccgcttgagg cgcaatagtc gagcaccttg cggcggctga
     1861 cgcgcgcttg cgcggcatcc gagtttttct gaaaattcca gtccgggtag tagacctgta
     1921 gcaggtgatg ccacacatcg ccgatgaaag cggcgcgctg gcctttgctt tcgagcttga
     1981 agaaaacgtg gccgggtgaa tggccgggcg ccgagtcgat ctc
//
LOCUS       DATDHO010000487         2544 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_271454, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000487 DATDHO010000000
VERSION     DATDHO010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271454"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1290)
                     /locus_tag="VIY07_09335"
     CDS             complement(<1..1290)
                     /locus_tag="VIY07_09335"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEY6381992.1"
                     /translation="MNLPKLSIAARLYAIFALMALTTVALSTLAVSKARVHAALTDEF
                     ESANSGSWNVERINGLIYATVMDLRGIYMSAEKAEVAKYADSLVKVTDQISAVTADWQ
                     RGVRNNDALAFSNCAVRLNDYQDSLYKLARIAKESGAQAAREWADKNQPAEIRAALSK
                     DLANLSQHYTDRASQIYTQIDRGIDSTALLLTVLACSAVALAVAGIAIIARSVTRPIS
                     AITSITEAVAKGDSAIAIPFSDRRDKIGALARSIGVFQTAMRTNADLNRTVLNDAELR
                     SRRQQQMSNEISKFSAEVEATLAELGRISDEMLAASSKLGASADHAFGKTARAEELSS
                     EASANVRDIASAADELSASVNEIDRQVAQSNAIATKVVNEVESTNLAVKELDEAAARI
                     GDVVKLITDIAEQTNLLALNATIEAARAGEAGRGFAVV"
     gene            1377..2324
                     /gene="gshB"
                     /locus_tag="VIY07_09340"
     CDS             1377..2324
                     /gene="gshB"
                     /locus_tag="VIY07_09340"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEY6381993.1"
                     /translation="MSLKIAVQMDPIERINIKGDSTFALLLEAQKRGHDLTYYTPDRL
                     ALLDGRVFAHVQSLTVRDKAGDHFTLDRPRRVELAELDVVLLRQDPPFDLAYVTTTHL
                     LERIHPKTFVVNDPAHVRNAPEKVFVTEFADLMPPTLISRDLAEIKAFRAKHGDIVMK
                     PLYGKGGEAVFRLEREDLNFGSLFDLFANTFREQWVVQKFLPNIRNGDKRIILVDGEY
                     AGAVNRVPAADDLRSNMVRGGVPAATELTKREVEICKRIGPALRQRGLLFVGIDVIDG
                     YLTEINVTSPTGIRAIKNLGGPDVAALIWDKIEAKRKAR"
     gene            2331..>2544
                     /locus_tag="VIY07_09345"
     CDS             2331..>2544
                     /locus_tag="VIY07_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018856974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6381994.1"
                     /translation="MGVALTIATTDYDHFRDFRLGLVRAEGIETNWLTLGHHEIFSRF
                     TFNREWDVSELSFAKFLAQVTRPDPDI"
BASE COUNT          495 a          754 c          738 g          557 t
ORIGIN      
        1 caccactgca aagccccgcc cggcttcgcc ggcgcgtgcg gcttcgattg tcgcgttcag
       61 cgcgagcaga tttgtctgct cggcgatatc ggttatgagc ttgaccacgt cgccaatgcg
      121 cgcagccgct tcatcgagct ccttgactgc aaggttcgtc gattccacct cattgacgac
      181 cttggtggcg atggcattgg attgagctac ctggcgatca atctcattga ccgatgccga
      241 caactcatcg gcggccgaag cgatatcgcg cacgttggcg gatgcttccg aagacaattc
      301 ttcggcacgg gctgtcttgc cgaacgcatg gtcggcggaa gctccaagct ttgatgacgc
      361 cgccagcatt tcatcggaaa ttcgcccaag ctcggcaagc gtcgcttcca cctcggccga
      421 gaatttcgag atttcattcg acatttgctg ctggcgtcgc gacctcagct cggcgtcgtt
      481 gagcaccgtg cgattgaggt ccgcgttggt ccgcatcgcc gtctggaaaa ccccgattga
      541 ccgtgcaagc gcgccgattt tgtcgcgtcg atcgctgaac ggtatggcga tggcgctatc
      601 gcccttggca acagcttccg taatgctggt tatggctgaa atgggccttg tcacgctgcg
      661 cgcgatgatc gcgatgccgg caacagcgag cgcgacggcg ctgcaggcga ggacggtcaa
      721 tagcagcgca gtactgtcga tgccccgatc tatttgcgtg taaatctggc tggcccgatc
      781 agtatagtgc tgactcaggt tcgccagatc tttgcttagc gcagcgcgaa tttcggcggg
      841 ctggttcttg tcggcccatt cccgcgcggc ttgtgcaccg gactcctttg cgatgcgcgc
      901 aagtttatac agagaatcct ggtagtcgtt gagtcggacc gcacagttgc tgaacgcgag
      961 cgcgtcgttg ttgcgaacgc cgcgttgcca gtccgcggtg accgcgctga tctggtcggt
     1021 gaccttgacg agcgagtcgg catatttggc gacctcggcc ttttcggccg acatatagat
     1081 gccacgcaag tccatgaccg tggcgtagat caggccattt attcgctcga cgttccagct
     1141 gccggaattt gcggattcga actcgtcggt cagggccgca tgaacccggg ctttcgatac
     1201 cgcaagcgtc gacagcgcaa cggtcgttaa agccatcaat gcgaagatcg cgtacagtct
     1261 ggcggcaatt gaaagctttg gcagattcac caatggcccc ctgcccgtgc aactacggtc
     1321 ccgaagccgt tatagtgcgg gtaatttgtt aacgctttgt tcgcctaaag gtggtcatga
     1381 gcctcaaaat cgctgtgcag atggatccga tcgaacggat caatatcaaa ggcgactcga
     1441 ccttcgccct gctgctggaa gcgcagaaac ggggtcacga ccttacctat tacacccctg
     1501 atcgactggc gctgctcgac gggcgggtgt ttgcccacgt tcaatccctg actgttcgcg
     1561 acaaggccgg cgatcatttt acgttggatc gcccccgacg cgtcgagcta gccgagcttg
     1621 acgttgtatt gctccgccag gacccgcctt ttgatctggc ctatgtgacg acgacgcatc
     1681 tgctcgagcg cattcatcca aagacatttg tcgtcaacga cccggcccac gtgcgcaacg
     1741 cgccggaaaa agtttttgtc accgagttcg ccgacctgat gccgccgacc ctgatctccc
     1801 gcgatctcgc cgagatcaag gcatttcgcg ccaagcacgg cgacatcgtg atgaagccgc
     1861 tttatggcaa gggcggcgaa gcggtctttc gactcgaacg cgaggatctg aatttcggtt
     1921 cactttttga tctgttcgcc aacacattcc gcgagcagtg ggtcgttcag aaattcctgc
     1981 ccaatatcag gaacggggac aagcgcatca ttctggtcga tggtgaatat gccggcgcag
     2041 tgaaccgtgt tcccgcggcc gacgacctgc gttccaacat ggtgcgaggc ggggtaccgg
     2101 cggcaacgga actgaccaag cgcgaggtcg agatctgcaa gcgcattgga ccggcgctgc
     2161 gccaacgcgg cctgctgttc gtgggcattg acgtgatcga cggctatctg accgaaatca
     2221 atgtcacctc gccgaccggc attcgcgcga tcaagaatct tggcgggccc gacgtcgcag
     2281 cactgatctg ggacaagatc gaggccaagc ggaaagcaag gtgaggggca atgggcgtcg
     2341 ctctcaccat cgcgaccacg gattacgacc attttcgtga tttccgtctt ggccttgtcc
     2401 gcgcagaagg catcgagacg aactggctca cgctcggaca tcacgaaatc ttttcgcgct
     2461 ttacgttcaa tcgcgaatgg gacgtctccg agctttcctt tgccaagttc ctggcgcagg
     2521 tgacccgacc ggaccccgac atca
//
LOCUS       DATDHO010000488         1560 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_171956, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000488 DATDHO010000000
VERSION     DATDHO010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1560)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1560)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1560
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171956"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1023)
                     /locus_tag="VIY07_09350"
     CDS             complement(<1..1023)
                     /locus_tag="VIY07_09350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-utilizing N-terminal
                     domain-containing protein"
                     /protein_id="HEY6381995.1"
                     /translation="MRGALGGPRVLLRRLREVMAEPVSAQDRLDKVVVLIAANMVAEV
                     CSVYVLRVDGTLELYATEGLKREAVHQTVLRAEEGLVGLVASEATPMNLSDAQAHPAF
                     SYRPETGEEIYHSFLGVPVLRAGNTLGVLVVQNRARRTYTEEEEEALQTTAMVLAEMI
                     ASGELSSLARPGAEPVARHAMHLVGTSLSDGIALGHVVLHEPRVVITNVIADDVQNEL
                     MRLDTAIAALREDLDRLVEHRDVADGGEHRDVLEAYRMFSYDQGWLHRIREAVMTGLT
                     AEASVERVQSDTRARMLRASDHYLRERLHDLDDLANRLMRVLMGQDHAPTKEQLPENA
                     IIVARAM"
     gene            complement(1187..>1560)
                     /locus_tag="VIY07_09355"
     CDS             complement(1187..>1560)
                     /locus_tag="VIY07_09355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6381996.1"
                     /translation="TYRHQAIHDLLTSSTVQIRDLAKAQPHRFRGRRETISPPGMPSL
                     VRRGAVIAAYLLSWFMLFSLAMASLPPVGLVSRQCIDGEPCSTTELIVLTLLWVAWAG
                     TSIWTAVRGWQGRLLGARADQ"
BASE COUNT          307 a          493 c          490 g          270 t
ORIGIN      
        1 cattgcgcgc gcgacgatga tcgcattttc cggcagctgc tcttttgtcg gcgcatgatc
       61 ctggcccatc aaaacgcgca tcagccggtt tgcaagatcg tcgagatcat gcaggcgctc
      121 acgcaaataa tgatcggaag cacgcagcat gcgcgcgcgc gtgtcggact gcacccgctc
      181 gacgctggcc tcggccgtaa ggccggtcat cacggcttcg cgaatcctgt gcagccaacc
      241 ctggtcgtag gagaacatgc gataggcttc gagcacgtcg cgatgctcgc cgccgtcggc
      301 cacatcgcgg tgctcgacca gccgatcgag atcttcgcgc agcgcggcaa tcgccgtgtc
      361 aaggcgcatg agttcattct gcacgtcgtc agcgatcaca ttggtgatga ctacgcgcgg
      421 ctcgtgcagg accacatggc caagcgcgat gccgtctgaa agcgaagtgc cgacgagatg
      481 catcgcgtgc cgcgcgaccg gctcggcgcc gggccgcgcg agcgacgaca gctcgcctga
      541 tgcaatcatc tcggcgagaa ccatcgccgt ggtctgcagt gcctcttctt cttcctcggt
      601 ataggtgcgg cgtgcgcgat tttgcaccac gagcacgccg agcgtgttgc cggcgcgcag
      661 gaccggaacg ccaaggaatg agtgatagat ctcttcgccg gtttcgggcc gataagagaa
      721 agccggatga gcctgcgcgt ccgaaaggtt cattggcgtg gcttcgctgg cgaccaggcc
      781 gacgaggccc tcttcggctc tcaggacggt ctggtggacg gcttcgcgtt tgaggccttc
      841 agtggcataa agctccagcg ttccgtctac gcgcaacacg tagacagagc acacctcggc
      901 aaccatgttg gcggcgatga gcaccaccac cttgtcgagg cgatcctgtg cgctgaccgg
      961 ctccgccatg acttcgcgga gccggcgcaa cagcacgcgc ggaccgccga gcgcgccacg
     1021 catgagtgag atcccttagc cacggcttcg gccgcagcct cattacggcc aaatcgtgta
     1081 cgaatagcga ctcggatccg gtatccgcgg tcgcttacgc gtcaggctat agccaaaggc
     1141 atatgcaagg ggcaagccaa agcgacactg agttgccgcg aaactgctat tgatcggcgc
     1201 gcgcccccag aagtcgacct tgccatcccc gaacggccgt ccagatgctg gtgcccgccc
     1261 aggctaccca aagcagcgtc agcacaatga gctccgtcgt ggaacaaggc tcgccgtcga
     1321 tgcactgcct ggaaaccagg ccgacgggag gaagggacgc catcgcgagg gagaacagca
     1381 tgaaccagga caacaggtac gcggcgataa ccgcaccgcg ccgcacaagc gagggcatgc
     1441 ccggtggcga tatcgtttcg cgcctgcccc tgaaacgatg gggttgggcc ttggcgaggt
     1501 ccctgatctg cacggtcgag ctcgtcagaa gatcgtggat tgcctgatgg cggtatgtca
//
LOCUS       DATDHO010000489         1608 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_271569, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000489 DATDHO010000000
VERSION     DATDHO010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_271569"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /locus_tag="VIY07_09360"
     CDS             complement(<1..707)
                     /locus_tag="VIY07_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY6381997.1"
                     /translation="MSASVRRNLLQNIDENREKAITFLQQMIAIPSVTGDEAEIQQFL
                     AEYLAKIGLEVDMWETDWEQLKKHPAYRPVERGYEGRPNIVATLKGAGGGRSLLLNGH
                     TDVIPVGGGEGWSDDPWSATIKEGRIYGRGSADMKSGVASHIMAVESLLAAGLKPKGD
                     VYINVVIDEEVSGHGTLDTVIRGYRADAGISGETSDLAVQPACIGRIWFEIEIHGKPA
                     GIQKRYEGISGIALGNK"
     gene            complement(835..>1608)
                     /locus_tag="VIY07_09365"
     CDS             complement(835..>1608)
                     /locus_tag="VIY07_09365"
                     /inference="COORDINATES: protein motif:HMM:NF017999.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEY6381998.1"
                     /translation="IESRRMRGIEAIPDAGRKTTGPAGSGHARTADLANVGRGEAPTS
                     KALPPRTAAEAVEGPFAPVGDLTPQLKLVHHFIVRHPREDVWAFFASIKDVAACLPGA
                     SITGGDNRSVTGKLRIKVGPIAAEFEGIAIVEYNPSDYSGTIRGSGRDTRGRTAARGA
                     ISYRAVPAENPQSTRVDISIAYALTGALAQFSRTELMQDVVKQVIKSFVQNLEARLAA
                     PGQSPSAPAVELNAGSVVFSVMAERVKGWFRKLLGRTEA"
BASE COUNT          291 a          502 c          470 g          345 t
ORIGIN      
        1 atcttgttgc cgagcgcaat tccgctgatg ccctcgtacc gcttctgaat gccggcaggt
       61 ttgccgtgga tttcgatctc gaaccagatc ctgccgatgc aggcaggttg caccgcgagg
      121 tcgctggtct caccggaaat gccggcgtcc gcgcggtacc cgcggatcac cgtatccaag
      181 gttccgtggc cgctgacttc ctcgtcgatg acgacattga tgtaaacatc gcccttgggc
      241 ttcaatcccg cggccagcag ggattccact gccatgatgt ggctcgcgac tccgcttttc
      301 atgtcggcag agccccgccc atagatacgg ccctctttga tggtcgcgga ccagggatca
      361 tcgctccatc cctctccacc accgaccgga atgacatccg tatgcccgtt gaggagcagt
      421 gagcgcccgc caccagcgcc tttcaaggtt gcgacaatgt tggggcgtcc ttcatagccc
      481 cgctccacgg gtcgatatgc tggatgcttt ttgagctgct cccaatccgt ttcccacatg
      541 tcgacttcta gaccgatctt cgccaggtat tcggctagaa actgttgaat ctctgcttcg
      601 tccccggtga cgctgggtat ggcgatcatt tgctggagaa aggtgatcgc cttctcacga
      661 ttctcgtcga tgttttggag aaggttccga cggacgctcg cactcatttg gaaacctttc
      721 caagaatccc ggtgagcaga gctcaattgg taagaggcga tatcatggct gtcaatcgac
      781 acgtgcagcc aagtgcgtta tcgcggaccg tggtccaggt tccgtcggcg gcattcaagc
      841 ctcggtacgg ccgagcagct tacggaacca gcctttgact cgctcggcca tgactgaaaa
      901 tacaaccgag cccgcattta gctcgacagc aggggccgat gggctctggc ccggcgcggc
      961 gagccgcgcc tccagatttt gtacgaaaga tttgataact tgcttgacga cgtcctgcat
     1021 caattctgtt cggctgaact gcgcaagtgc gccggtcaac gcataggcga tggagatgtc
     1081 cacgcgggtg gattggggat tctcggcggg caccgcgcga tagctgatag ctccccgagc
     1141 agccgttctg ccgcgcgtgt cgcggccgct gccccgaatt gtgccggaat aatccgacgg
     1201 attgtactcc acgattgcga tgccctcgaa ctccgccgcg atgggaccga ccttgatgcg
     1261 cagcttgccc gtaacactcc ggttgtcgcc gccggtgatg gaggcccccg gcaagcaggc
     1321 ggccacatcc ttgatgcttg caaagaatgc ccagacatcc tcgcggggat gacggacgat
     1381 gaagtgatga acgagtttga gctgaggcgt caaatcgcca accggcgcga acggcccttc
     1441 aactgcttct gccgcggtgc gaggcggcaa ggccttcgac gtcggggctt cgccgcgccc
     1501 gacgttcgca aggtccgcag tcctcgcgtg acccgaacct gccggcccag tggtcttgcg
     1561 tccggcatcg ggtatcgcct cgatgccgcg catccgccgg ctttcgat
//
LOCUS       DATDHO010000490         3338 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_69356, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000490 DATDHO010000000
VERSION     DATDHO010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3338)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3338)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3338
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69356"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..764)
                     /locus_tag="VIY07_09370"
     CDS             complement(<1..764)
                     /locus_tag="VIY07_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6381999.1"
                     /translation="MTAYIIRRLLFMVPTMFGIMLVAFVVVQFAPGGPVEQVIAKLTG
                     SDTGATSRISGSTGGDFGNRGLAQGASQVDAVTSKYRGAQGLDPEFIKKLETQFGFDK
                     PAPERFALMLWNYLRFDFGKSYFRDVNVLQLIKEKLPVSMSLGIWMTLMTYLISIPLG
                     IRKAMHDGSRFDVWTSTVIVVGYAIPGFLFAILLIILFAGGSFFDWFPLRGLVSENWS
                     SLPWWQKILDYFWHLTLPILAMALSAFATMTLLTKNS"
     gene            complement(815..2677)
                     /locus_tag="VIY07_09375"
     CDS             complement(815..2677)
                     /locus_tag="VIY07_09375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY6382000.1"
                     /translation="MMNLSRRGALTLLGSAAAASAASIIPGSAQDGDRHGMSAFGDLQ
                     YPPDFPHFKYVNPNAPKGGVFSQIGPSRQFNQSFQTFNSLNSYILKGDAAQGMQLTFA
                     TLMVRSGDEPDAMYGLAARSVRISDDELTYRFTLRDQAKFHDGSRLTAHDVVWSLTTL
                     KDKGHPIITQQLRDFTGAEAADERTVVVHFAENRGRDVPLFVATLPIFSRAYYSKKNF
                     EESTLDIPLGSGAYKVGKLQVGHFIEFERVKDWWGADLPVSRGQNNFDVLRFEYYRDR
                     EVGFEGFTGKNYLFREEFTSRFWATRYEFPAFKDGRVKRDVLPDDTPSGAQGWFINTR
                     REKFKDRRVREALIDAFDFEWTNKNIMYSSYERTHSVFQNSPMMAKGKPDAAELALLE
                     PFRGKVPDEVFGEPYVPPVSDLSGQDRKLLRRAAQLLNDAGCALKNGKRVLPGGQPIT
                     IEFLIDEPTFQPHHLPYIKNLGVLGIDATLRIVDPVQYRARVDAFDFDITVERFSFSS
                     TPGDSLRTFFSSQAAATRGSQNRAGIADPAVDALVDVIIAAKTREELTAACKALDRVI
                     RAGRYWIPHWYKGSHWIAYWDVFGRPDVKPRYFRGIPETWWYDRDKSVRSEQKG"
     gene            complement(2678..>3338)
                     /locus_tag="VIY07_09380"
     CDS             complement(2678..>3338)
                     /locus_tag="VIY07_09380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382001.1"
                     /translation="FSQPYTNPVGGNAQNVRNNTREALALLRSAGYEVRNTKLVGNNG
                     EPLQVELLVEQPSFERIMLFYKPSLERLGIVVSVRTIDSSQYENRLRQWDFDIIINSW
                     GQSLSPGNEQRNFWGSQAADQPGSRNLVGIKNPAVDTLIDRVIFAKSRAELVAATKAL
                     DRVLLWNFYVVPQWTYGKQRTARWDRFGHPDVMPQYAASAFPTVWWWDAAKAAKVPQR
                     S"
BASE COUNT          741 a          985 c          952 g          660 t
ORIGIN      
        1 gagtttttgg tgagcaaggt catcgtcgca aaagccgaca gcgccatggc gagaatcggc
       61 agcgtcagat gccagaaata atcgaggatc ttttgccacc agggcagcga cgaccagttc
      121 tcggacacca ggcctcgcaa gggaaaccag tcgaagaatg agccgccggc gaaaagaatg
      181 atcagcagga tcgcgaacag aaatccgggg atcgcatagc cgacgacgat caccgtcgaa
      241 gtccatacgt caaagcgcga accgtcgtgc attgccttgc gaatgccgag gggaatcgaa
      301 atcaagtacg tcatcaaggt catccagatc ccgagcgaca tcgagaccgg caacttttcc
      361 ttgatcaact gcagcacgtt gacgtcgcgg aaatagcttt tcccgaagtc gaatcggagg
      421 tagttccaga gcatcagggc aaagcgctcc ggtgccggct tgtcgaatcc gaactgggtc
      481 tcgagcttct tgatgaattc cggatccagg ccctgcgcgc cgcgatattt cgaggtaacc
      541 gcgtctacct gcgaagcgcc ctgcgcgagg ccacgattgc caaaatctcc gcccgtcgag
      601 ccggaaatgc gcgaagtcgc gcccgtatcc gatccggtga gcttggcaat gacctgctca
      661 accggaccac cgggcgcgaa ctgcaccaca acgaaagcca ccagcatgat gccgaacatc
      721 gtcggcacca tgaacagcag acggcgaata atataggcgg tcatgcgctc ctcagtacgt
      781 cattcctcca ccggcgcaaa gcgcgcggtc ccgcttatcc tttttgttct gatcttacgg
      841 acttgtcgcg atcgtaccac cacgtttcag gaatacctcg aaaatagcgc ggtttaacat
      901 ccggacggcc gaacacgtcc caataggcga tccagtgcga ccctttgtac caatgcggta
      961 tccagtatcg tccggctcgg atcacgcgat caagcgcctt gcaggcggcg gtaagttcct
     1021 cgcgggtctt ggcggcgata atgacgtcca ccagcgcatc gacagcgggg tcggcgatgc
     1081 cggcgcgatt ttgcgatcct ctcgtcgcgg cggcttgcga tgagaaaaag gtgcggagcg
     1141 agtctcccgg tgtcgatgaa aagctgaagc gctcaacggt gatgtcgaaa tcaaaagcat
     1201 cgacgcgcgc gcgatattgc accggatcaa cgatgcgcaa agttgcgtca atgccgagca
     1261 cgcccaaatt cttgatatac ggcagatgat gcggctggaa tgtcggctca tcaatcagaa
     1321 attcgatggt gatcggctgg ccgcctggca ggacccgctt gccgttcttc agcgcacaac
     1381 cggcgtcatt gagcagctgc gcagcacgcc tcagcagctt gcggtcctgt cccgacaagt
     1441 cggacaccgg tggcacgtag ggttccccga agacttcatc aggcactttt ccacgaaagg
     1501 gttcaaggag cgcgagctcg gcggcatcgg gcttcccttt cgccatcatt ggagaattct
     1561 gaaacacaga atgcgtgcgc tcataggaac tgtacatgat attcttgttg gtccactcga
     1621 aatcgaaagc gtcgatcagg gcttcgcgca cgcgccggtc tttgaatttc tcgcgccggg
     1681 tattgataaa ccatccttgg gcacccgaag gcgtatcgtc gggcaggacg tcccgcttga
     1741 cgcgtccatc cttgaaggca ggaaactcat agcgcgtcgc ccagaaacgt gacgtgaatt
     1801 cctcgcggaa aagataattc ttgcctgtaa atccctcgaa cccgacttcc ctgtcgcggt
     1861 agtactcgaa ccgcagcaca tcgaaattat tctgcccgcg cgaaaccggg agatccgcac
     1921 cccaccaatc cttcacccgc tcaaactcga tgaaatgccc gacctgtaac ttgccgacct
     1981 tgtatgctcc gctcccgagc ggaatatcca gcgtcgattc ctcgaaattc tttttcgaat
     2041 agtaggcgcg agagaaaatc ggcaatgtcg caacgaatag cggcacatcg cgtcctcgat
     2101 tttcggcgaa gtgcaccacg accgtgcgtt catccgccgc ttccgcgccc gtgaagtcgc
     2161 gcagttgctg cgtgatgatc ggatgaccct tgtccttcag cgttgtcagc gaccagacca
     2221 cgtcatgcgc cgtgaggcgg ctgccgtcat ggaatttcgc ctggtcccgc agggtaaaac
     2281 gatacgtcaa ttcatcatcg gaaatgcgaa cgctgcgggc ggcaaggccg tacatcgcat
     2341 cgggctcatc gcctgagcgc accatcagcg tggcgaacgt gagctgcatc ccctgggctg
     2401 catcgccctt gagaatatag ctgttgaggg aattgaaggt ctgaaacgac tgattgaact
     2461 gccggctcgg gccaatctgt gagaacacgc cgcccttcgg cgcattcgga ttgacatatt
     2521 tgaagtgcgg gaagtccggc ggatattgaa gatcgccgaa ggccgacatc ccgtgtcgat
     2581 cgccgtcctg cgccgagcca ggaatgatgc tggcggcact ggctgccgca gcgctgccga
     2641 gcagcgtcaa cgccccgcgg cggctgagat tcatcactca ggaccgttgc ggcactttgg
     2701 ccgctttcgc agcatcccac caccaaaccg tagggaatgc cgacgccgcg tattgaggca
     2761 tgacgtcggg atgcccgaaa cgatcccagc gcgcggtgcg ttgcttcccg tatgtccatt
     2821 gcggaacgac gtagaaattc cacaacagca cgcgatcgag agccttggtg gcggcgacca
     2881 gctccgcgcg actcttggcg aagatcacgc gatcgataag cgtgtcgaca gcggggttct
     2941 taatgccgac caggttgcgc gatcccggct ggtcggcggc ctgcgagccc cagaaattac
     3001 gctgctcgtt gccgggtgag agtgattgac cccaagagtt gatgatgatg tcgaaatccc
     3061 attggcgcaa tctgttctca tattgcgaag agtcgatcgt gcgcacggaa acaacaatgc
     3121 caagccgctc cagcgacggc ttgtagaaaa gcatgatccg ctcgaatgac ggttgctcca
     3181 ccagcagttc gacctgtaat ggctctccat tgttgccgac cagcttcgtg ttgcggactt
     3241 cgtacccggc ggagcgaagc aaggcgagag cctcgcgcgt gttgttgcgc acgttctgcg
     3301 cgttgccgcc aaccggattg gtatagggtt ggctaaac
//
LOCUS       DATDHO010000491         3885 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_419743, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000491 DATDHO010000000
VERSION     DATDHO010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3885
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419743"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..287
                     /locus_tag="VIY07_09385"
     CDS             <1..287
                     /locus_tag="VIY07_09385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HpcH/HpaI aldolase/citrate lyase family protein"
                     /protein_id="HEY6382002.1"
                     /translation="IGNTDGFAAECAQGLELGFDGKTLIHPSQIELCNKAFSPTPGEV
                     EQARKIIAAFDLPENRGKGVVSIDGRMVERLHAEMARRTVAIAEAIARSA"
     gene            435..662
                     /locus_tag="VIY07_09390"
     CDS             435..662
                     /locus_tag="VIY07_09390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015241910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY6382003.1"
                     /translation="MIVCSCNVLSDQEVRSAASAAARRSTSHVYGCLGCSAQCGRCAR
                     TIRKIIDETLNGAKVGCPVGCACAMHAADAL"
     gene            778..1269
                     /gene="bfr"
                     /locus_tag="VIY07_09395"
     CDS             778..1269
                     /gene="bfr"
                     /locus_tag="VIY07_09395"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEY6382004.1"
                     /translation="MKGDTRVIEFLNKALRHELTAVNQYWLHYRLLDNWGYKDLAKQW
                     RKESIEEMEHADKLVERIIFLDGFPNMQVLDPLHIGQNVKEVLDCDLAAEMTARELYQ
                     EAATHCHAVKDYVTRDLFEKLMSDEEHHIDFLETQLDLVGKLGLELYAQHHIGEMGEE
                     GED"
     gene            1417..1737
                     /locus_tag="VIY07_09400"
     CDS             1417..1737
                     /locus_tag="VIY07_09400"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HEY6382005.1"
                     /translation="MAEIQEGNRVVTQITTVKLTPDKQDEVLNLMTERARFMASQPGF
                     VSIALHRSKDGSHVVNYVQWRDADSLAAAHHSPEFRKKWPQFGKIADEIEPCLYDIVH
                     VEAA"
     gene            complement(1744..2349)
                     /gene="leuD"
                     /locus_tag="VIY07_09405"
     CDS             complement(1744..2349)
                     /gene="leuD"
                     /locus_tag="VIY07_09405"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEY6382006.1"
                     /translation="MEKFTTLEGVAAPLNIINVDTDMVIPKQYLKTVKRTGLGKGLFS
                     EQRYRDDGSENPDFVLNKPAYRKAKILVAADNFGCGSSREHAPWALMDFGIRCVISTS
                     FGDIFYNNCFKNGLLPIRVSPEDLEKLFDDAIRGANATLTIDLEKQEIRGPDGGVVHF
                     EIDPHRKHCLLNGLDDIGLTQRKQDKIESFEQKAAAARPWL"
     gene            complement(2685..3002)
                     /locus_tag="VIY07_09410"
     CDS             complement(2685..3002)
                     /locus_tag="VIY07_09410"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEY6382007.1"
                     /translation="MIVTVFRSRLMPNVREEYVALVDRMIELAKTMPGYISHKGFFAD
                     DGERVTIVEFEHEEGMRAWRMNPEHRAAQKKAREIYYSEYSVQICNLVRESRFKRDER
                     ASA"
     gene            complement(3095..3508)
                     /locus_tag="VIY07_09415"
     CDS             complement(3095..3508)
                     /locus_tag="VIY07_09415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase family protein"
                     /protein_id="HEY6382008.1"
                     /translation="MKVQFNWRTCAAPSLGDIEGLAQEAYARLPEHFRKLCESLVIRV
                     EDFPTSEVLGSMQAESEFDLLGLFQGVGLPFQSESTPELMPNMIWLYRRPILDYWAEH
                     EDTLGEIVTHVLVHEIGHHFGLSDEDMEAIEASVE"
     gene            complement(3505..3795)
                     /locus_tag="VIY07_09420"
     CDS             complement(3505..3795)
                     /locus_tag="VIY07_09420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382009.1"
                     /translation="MVTRVRRVCADKSWIGAGAWPTHDALGPEPRSRQVEESADTGVT
                     APRTRPQIKPSGAKLAADLSIVNYVPDDQASRIRGRAVNGLVGVKTSPTTLS"
BASE COUNT          798 a         1109 c         1150 g          828 t
ORIGIN      
        1 acatcggaaa taccgatggc tttgccgcgg aatgtgccca gggcctcgag ctcggattcg
       61 acggcaagac actcattcac ccgagccaga tcgaactgtg caataaagcg ttttcgccaa
      121 cgccgggcga ggtcgagcag gcgcgcaaga tcatcgcggc attcgatctg ccggagaaca
      181 ggggcaaagg cgtggtgtcg atcgatggcc gcatggtcga gcggctgcac gcggagatgg
      241 cgcggcgaac ggtcgctatt gcggaggcga tcgcgcgctc ggcatgaaat tcaaaactaa
      301 atcatggcgg tacgccggtc ttgagcgcgg caaaaagacg ttctgacgca atagtttaga
      361 acgtttttaa aaagcagttt tcttttgact cggcggcatg cacccggtag cgaataccca
      421 gatacgggtg actgatgatt gtttgttcct gcaacgtatt gagcgaccaa gaagtgcgga
      481 gtgcggcgag cgccgcagca cgccggtcga cgagccatgt ctatggctgt cttggctgca
      541 gcgcgcagtg cgggcggtgc gctcgcacca ttcgcaagat tatcgatgaa acgctcaatg
      601 gtgcgaaagt cggctgcccg gtcggttgcg cgtgcgcgat gcacgctgcg gatgcgcttt
      661 aacaaccatt gactgtagat gcgcaagtgc gccggcactg gccgccgcgc gcaatttttt
      721 gctagcgttt gcggtagggc gtggacgtta gtttagtgcc cgcgacagga gccggtcatg
      781 aaaggtgaca caagagtcat cgagtttctc aacaaggcgc ttcgccatga gttgaccgcc
      841 gtcaaccaat actggctgca ctaccggctg ctcgacaatt ggggatacaa ggacctggca
      901 aagcaatggc gcaaggaatc gatcgaggag atggagcacg ccgacaagct ggtcgagcgc
      961 atcatttttc tcgatggttt ccccaacatg caggtgcttg acccgctgca catcgggcaa
     1021 aacgtaaaag aggtgctgga ctgcgatctc gctgcggaga tgacggcccg cgagctctac
     1081 caggaagctg caacgcattg tcatgccgtc aaggattacg ttacgcgcga tctgttcgag
     1141 aagctgatgt cggatgagga acaccacatc gatttcctcg aaacccagct cgatctcgtc
     1201 ggcaagcttg gcctcgagct ttacgcgcaa catcacatcg gcgaaatggg cgaggaaggc
     1261 gaagattgac gtcgatgcgg gccgcgcaag ctcgtggctc agcacattca gcgatcggca
     1321 tgtgggctca atgcgggctc atgctactgg cttgcatgac gaacccttca ggcaggttac
     1381 gcgttgtccc tgcgcatctc acgaagggat tttgccatgg ccgaaattca agaaggcaat
     1441 cgtgttgtca ctcaaatcac gacagtaaag ctcacgcctg acaagcagga tgaggtgctt
     1501 aatctcatga ccgagcgcgc gcgcttcatg gcgtcgcagc ccggcttcgt ttccattgcc
     1561 ctccatcgca gcaaggatgg cagccacgtg gtcaactacg tgcagtggcg cgatgcggat
     1621 tcactcgcag ccgcacacca ctcgccggag ttccgaaaga agtggccgca atttggaaag
     1681 attgcagacg agatcgagcc gtgcctttac gacatcgttc acgttgaagc ggcctgacgt
     1741 cgtctacaac cacgggcgag cggcggcggc cttctgctcg aagctttcga tcttgtcctg
     1801 ctttcgctgc gtcagcccga tgtcatcaag gccattgagc aggcaatgct tgcgatgcgg
     1861 gtcgatctcg aaatggacga caccgccgtc cggtccacgg atttcctgct tctcaaggtc
     1921 gattgtcagt gttgcgttgg ctccgcggat ggcatcgtcg aacagttttt cgagatcctc
     1981 cggcgaaaca cggatcggca acaatccgtt tttgaagcag ttattgtaga agatgtcgcc
     2041 gaacgacgtt gagatcacac agcggatgcc gaaatccatc agcgcccagg gcgcgtgctc
     2101 gcgcgacgag ccgcagccga agttgtctgc cgcgaccagg atcttggctt tgcgataggc
     2161 cggcttgttg agcacgaaat ccggattttc gctgccatca tccctgtagc gttgctcgga
     2221 gaaaaggccc ttgccgagcc cggtgcgctt gaccgtcttc agatactgct tcggaatcac
     2281 catgtcggtg tcgacattga tgatattcag cggcgcggcg acgccttcga gggtggtaaa
     2341 tttttccatg gatttctccg gcgtcacctg caggccagtt tggaacggtt ctgcttcata
     2401 aaacgtccgg tgttctggtc aatagcaggt tcgaccttgg agaccagata tgcatatttt
     2461 gatgaccacg ctactcgtgg ttcttgggtc tttatccccg gcaaaggcat ccaatgatgg
     2521 gacctggtgc taccgcgact ttggcgcgac gcgaagcgcc aattgccgat tttattctgc
     2581 caggcagtgt ctgatcgttg ccggaacctt cggcgggata tgcgagcgca acaacccgcc
     2641 accgccgccg acaaggaagg acaagcgcag ggcgtcctga aggttcaggc ggacgcgcgt
     2701 tcatcacgct tgaacctgga ttcccgcacc aggttgcaga tctgcacgct gtactcggaa
     2761 taataaattt cacgcgcttt tttctgcgcg gcccggtgct ccggattcat ccgccaggcc
     2821 cgcatgcctt cctcatgctc gaactcgacg atcgtcaccc gctcgccatc gtcggcgaaa
     2881 aaacctttgt gcgagatata cccgggcatg gttttggcca gttcgatcat gcggtcgaca
     2941 agcgcgacgt actcttcgcg cacgtttggc atcaggcgcg agcgaaagac ggtcacgatc
     3001 atggcaagtc tccttgcgtc gtatgctgct ctggctgtcg cgtgtcgacc aattccaatt
     3061 ttgaatggac accatcgatt ttggcgattc gcgcctattc cacgctggcc tcgatcgctt
     3121 ccatgtcttc atccgagagc ccgaaatggt ggccaatctc gtgcacaagc acgtgggtga
     3181 cgatttcacc cagcgtgtct tcgtgttcgg cccaatagtc gaggatcgga cggcggtaaa
     3241 gccagatcat attgggcatc agctccggcg tgctctccga ctggaacggc aagccgacgc
     3301 cctggaacag ccccagcagg tcgaattcgc tctcagcctg catcgaaccg aggacctccg
     3361 aggtggggaa gtcctcaacc cggatgacga ggctttcgca cagttttcga aaatgctcgg
     3421 gcaggcgggc gtaggcttcc tgggccaatc cttcgatgtc gcccagggaa ggtgccgcgc
     3481 aagtgcgcca attgaattgg accttcatga cagtgttgta ggggaggttt tcacgccaac
     3541 caagccgttg acggcacgcc cccgaatgcg cgacgcttga tcatcgggga cgtaattcac
     3601 gatgctcagg tctgcggcaa gtttggcgcc actcggcttg atttgcggcc ttgtccttgg
     3661 cgcagtcacg ccggtatcgg ccgattcctc gacctgccgc gaacgcggtt cagggcccaa
     3721 tgcatcgtgc gtcggccatg ctccagcccc gatccaggat ttgtcggcac agacgcggcg
     3781 tacgcgcgtc accatctacc gccgccgggt ctccttaccg cccaatgccg tgcggcaatg
     3841 ccgcgcatgg ctggcgaggg agtatcgtgt cagcggcccg gtcat
//
LOCUS       DATDHO010000492         2299 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_419778, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000492 DATDHO010000000
VERSION     DATDHO010000492.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_419778"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(516..2216)
                     /locus_tag="VIY07_09425"
     CDS             complement(516..2216)
                     /locus_tag="VIY07_09425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY6382010.1"
                     /translation="MTDKPAGIANGLTNYGDRDFSLYLRRSFAQSMGYSRAMLAKPVV
                     GVAYTASGFNNCHRHFPELLQAVKRGVLTAGALPVEFPTISLGEVFLNPTSLKFRNLM
                     SMDTEEMVRAQPMDAVVLMGGCDKTVPAQLMGAVSAGKPTIMLVAGPMMTGRHRGERL
                     GACTDCRRFWAQYRAGKIDDHEISEVEGKLATTAGTCAVMGTASTMACIAEALGMILP
                     GTAAIPAVHADRLRAAEATGAAAVKLIGSQLTPDRIVNRKSVENALRVLLAAGGSTNA
                     IIHLTAIAGRAGIPVSLQRLNELSDTTPVLVNLKPVGNGYMEDFFAAGGMGALLRELK
                     DLLHLDCMTVTGETLDERLAHAGDDWVDRSIIAERKKPLEAEGGLVALFGNLAPQGAI
                     LKRSAADASLFEHEGRAVVFSSLEDLAARVDDPGLEVDARDILVLQNAGPHSASAMPE
                     AGYLPIPKKLASKGVKDMVRVSDARMSGTAFGTIVLHVTPDSASGGPLGLARTGDRIR
                     LSVKQRRVDLMLDDAEIKRRAAASKTTSRPPERGYARLYSQEILGADQGCDFSFLRPQ
                     "
BASE COUNT          436 a          718 c          685 g          460 t
ORIGIN      
        1 caggggcatc ttccaattag tgttgtcgtg atagtgaagt atcacgtctt tcttgcttgc
       61 caacacatca agtatggcat cgacgccctg gccctctttg tgcatggcga tgatttgtgg
      121 cgcatggcct ttgagccatc cgtcgtagcc cacgtggcgg ggctttcgag gtctggcgat
      181 aggctgattg cagtgtgcgc aaatctggtt cggcttcctt cccatttttt ttagtctcca
      241 ctgcgttacg ccgccccaga atccataccg cacgctcaca gcacaggaag tgatggctgt
      301 cacattatgt cgctttccac tctccagctt tgggaataga tacccacttt gggccaaaag
      361 cgggcattgc gtcatttaac gtcgatgtcc gcttagcccg ccgcagccag cgcctttcgt
      421 ccgagccggc gcggcgtccg catgcggccg tggttaaccc gcattaatac taagtcgggg
      481 tgaactttgc gctgcttgcg cgaaagcccg gaagatcatt gcggccgcag gaatgaaaaa
      541 tcgcagcctt gatcggcgcc caggatttcc tgggaataaa gacgcgcata gccgcgctcc
      601 ggcgggcgag aggtggtttt ggacgctgcc gcgcgccgtt tgatctcggc atcgtcaagc
      661 atgagatcga cgcggcgctg cttgaccgag aggcggatgc ggtcgccggt tcgcgcaagg
      721 cccaacggcc cgccggaggc gctgtccggc gtcacgtgga gcacgatcgt gccgaaagcc
      781 gtgccgctca tgcgggcgtc cgaaacgcgc accatgtcct tcacgccctt ggatgcaagc
      841 ttctttggaa ttggcagata gccggcttcg ggcatcgctg acgcagaatg tgggccggca
      901 ttctgcagaa caaggatatc cctggcgtca acctcaagac ctggatcgtc gacgcgagca
      961 gcaaggtctt ccagcgagga gaacaccacg gctcgccctt catgctcgaa caggctggca
     1021 tcggcggccg atcgtttcag gatcgcaccc tgcggcgcca ggttgccgaa cagagccacc
     1081 aacccgcctt ctgcttcgag cggcttcttg cgctcggcaa tgatgctgcg gtcaacccag
     1141 tcgtcgcccg catgcgcgag tctttcgtcg agcgtttcgc cggtcaccgt catgcaatcg
     1201 agatggagca ggtccttcag ttcgcgcagc agcgcgccca tgccacccgc ggcaaagaaa
     1261 tcttccatgt aaccattgcc aaccggtttc aaattcacca gcaccggcgt cgtatcggac
     1321 agttcgttga ggcgctgcag cgataccgga attccggcgc ggccggcgat cgcagtcaaa
     1381 tgaatgatcg cgttggtaga gccgccggct gcaagcaaga ctcgcagcgc gttttccacc
     1441 gacttccggt ttacgatgcg atcgggtgtg agctgcgagc caatcaattt gaccgcggcc
     1501 gcccccgttg cctcggcagc acgcaatcga tcggcgtgca cggcagggat tgcagccgtg
     1561 ccgggaagga tcatgccgag cgcctctgca atgcaggcca tggtcgaagc ggtgcccatc
     1621 accgcgcacg tgccggcggt ggtcgcaagc ttgccttcaa cctcggagat ctcgtgatcg
     1681 tcgatcttgc ctgcgcgata ttgcgcccag aatcggcggc aatccgtgca tgcgcccagc
     1741 cgttcgccgc ggtggcgccc ggtcatcatc gggcctgcga ccagcatgat ggtgggcttc
     1801 ccggcagaca ccgcacccat cagttgcgca ggcaccgttt tgtcgcaccc gcccatcagc
     1861 acgaccgcgt ccatgggctg tgcacgcacc atctcctcgg tatccattga catcagattg
     1921 cgaaatttca ggctggtcgg gttcagaaac acttcgccca gcgagatagt cggaaactca
     1981 accggcaagg cgccggcggt gagaacgccc cgtttcaccg cctgcagcaa ttccggaaag
     2041 tgccgatggc aattgttgaa cccggacgcg gtgtaggcaa cgccgacgac cggctttgcc
     2101 agcatcgcgc gggaatatcc catcgattgc gcaaaggagc gccgtagata cagggaaaag
     2161 tcccggtcgc cataattcgt gaggccgttg gcgatgccgg ccggtttatc ggtcatgctg
     2221 atactttctg cagccgctcg agccccgatg caagccgcag cctccaggga tgcgcggcaa
     2281 gccagctgta aaaccccgg
//
LOCUS       DATDHO010000493         1625 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_369732, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000493 DATDHO010000000
VERSION     DATDHO010000493.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_369732"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..224
                     /locus_tag="VIY07_09430"
     CDS             <1..224
                     /locus_tag="VIY07_09430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382011.1"
                     /translation="ECGLAEGVTRDSFGDDRKWMADYALAPLAPRKARPAIWAGQHLC
                     TALWVLPHMYHTVPLIELHQLHLLELQVS"
     gene            958..>1625
                     /locus_tag="VIY07_09435"
     CDS             958..>1625
                     /locus_tag="VIY07_09435"
                     /inference="COORDINATES: protein motif:HMM:NF015549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEY6382012.1"
                     /translation="MPPPATFPSAGAAFFDGVKSALASVFFPVIAGTYVGIGALAHDF
                     SFPSWWLALSTVLVWAAPAQVILISALGTGSALIEAAVAVSLSGIRLLPMVVALLPLV
                     RRKTTRLHQLLLPVHFTAVSMWVESLRLLPAVPPERRIAFCNGLSTTYMATATASGFV
                     GFYLAAGLPPLLAGALLFLTPMSFLISTARNARMLVDRVALLLGLGLGPLLAGFDIGL
                     DLMWT"
BASE COUNT          292 a          469 c          458 g          406 t
ORIGIN      
        1 ttgagtgcgg gttagccgaa ggcgtaaccc gcgattcgtt tggcgatgac agaaaatgga
       61 tggcggatta cgcgttggcc ccactggctc cgcgcaaagc gaggcctgcg atatgggctg
      121 gtcaacacct gtgcaccgcg ctgtgggtgt taccgcatat gtatcatacg gttcccttga
      181 ttgagttgca tcaactgcat ctgctggaat tgcaagtctc ttagagcata aaggccggcc
      241 atgcgatgcc cctctgcgag catgtttcgg cactcagcat acgtgcgaat tttttgtcga
      301 gcttgctcac gacaaattcc gtcgtctgtt gcgtattgag gcccgaagca acctcccaaa
      361 gtcagggcaa taaatgcaat ccaaacgaat ttcatgactt cacccacttg accctctttg
      421 tgaaaaaact cgattctaat tttccacaag tctacggacc gtggtgtaac aaaggtgaca
      481 atggcaagct tgttaatctc gcttattttg ttcctcaatt gcccttcctc ataaagagag
      541 tctcagccct tgttcgatcg cgtttctttt gcagtatccg tgatggaaga ctgatcgcgc
      601 agtctcctag ctgaatccgt ctgcccaact ttcttgatcg gaggagaaat tgtgcgatca
      661 ataaaccggt cgcacgatcc ttttgcgggc tccgtcgtca ttcatacccc caagccacag
      721 taaggtggca agcataacgt cttgccctac aacaggttga agtaaatgtg acagtcccag
      781 aggtacgggg tttatggagc cgcagtgttg caggcgtaac ggcgctgtgg aacagatgat
      841 ttctgccgat cgacagagag gccgagccca ggcccggcct tcgcattttg cagacggcgc
      901 atgcggcctg cgatggttgc gaaggtggcg gtgctatgag acaggtttgc ggcgcccatg
      961 ccaccaccgg cgacatttcc atccgcggga gctgcttttt tcgacggcgt caaatcggcg
     1021 ctcgcatcgg ttttcttccc ggtgatcgcc ggcacctatg tcggcatcgg ggcgctcgct
     1081 cacgactttt ccttcccatc atggtggctg gcgctgtcca cggtgctggt ttgggccgcg
     1141 cctgcccagg tcattctgat ctccgcgctc ggaaccggtt cggcccttat tgaagccgct
     1201 gtcgcggttt ctctgagcgg gattcgcttg cttccgatgg tggtcgcatt gctgccgctg
     1261 gtgcgacgaa agacgacgcg cctgcaccag ctgctcctgc ccgtgcactt cacggcggtg
     1321 agcatgtggg tcgagtcgct gcggctgctg cccgccgtac cgccggaacg ccgcattgca
     1381 ttctgcaatg gtctgtcgac tacctacatg gcaacggcga cggcatccgg ttttgtggga
     1441 ttctacctcg ccgccggcct gccgccgctg ctcgccgggg cgctcttgtt tctcacgccg
     1501 atgtcgttcc tgatctcgac ggcgcgcaat gcccgcatgc tggtcgatcg cgttgcgctg
     1561 ctgttaggcc ttggtctcgg accgctcctt gcgggttttg acatcggcct cgatcttatg
     1621 tggac
//
LOCUS       DATDHO010000494         1920 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_172146, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000494 DATDHO010000000
VERSION     DATDHO010000494.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_172146"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..262)
                     /locus_tag="VIY07_09440"
     CDS             complement(<1..262)
                     /locus_tag="VIY07_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotI"
                     /protein_id="HEY6382013.1"
                     /translation="MKRGASLFNVVAVAFGLAFLYLPIAILVIYSFNASRLVTVWGGW
                     SLVWYRELLHDTAIQQAAWISVRVAALSATAATVLGTLAAIAL"
     gene            complement(262..1176)
                     /locus_tag="VIY07_09445"
     CDS             complement(262..1176)
                     /locus_tag="VIY07_09445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6382014.1"
                     /translation="MAMEPTQRRNARATVLLPYLWLVAFFLVPFLIVLKISLSQTALA
                     QPPYVPVFDISSGWAGLVEFVSGLSIDSFRLLFSDTIYLLSYLKSLQVACISTIILLV
                     IGYPFAYGIARSPRGVQPLLVMAVVLPFWTSFLIRVYAWINILQRDGLLNDVLMKLHI
                     IDAPLTWLSSDTAIYIGMVYSYLPFMVLPLYATLEKMDVSLLEAAADLGCPRWKSFWL
                     VTVPLSMRGAAAGALLCFIPIIGEFVIPDLLGGSETLMIGQTLWTEFFSNRDWPVASA
                     IAVTLLVLLLVPILFYERLQRGSLEGGR"
     gene            complement(1179..>1920)
                     /locus_tag="VIY07_09450"
     CDS             complement(1179..>1920)
                     /locus_tag="VIY07_09450"
                     /inference="COORDINATES: protein motif:HMM:NF019998.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382015.1"
                     /translation="IAQRVAEMLALVRLEGLGGRRIDQLSGGQRQRVALARSLIKHPR
                     VLLLDEPLAALDKKLRAETQFELMELQRKLGTTFVIVTHDQEEAMIVADRIAVMNHGR
                     LMQVAPPAEIYERPCSRWLAGFIGEVNLIEGNMNAGGSIDTALGQLRIVTADKRRAGD
                     PVSLALRPEKISLSSERPNEKLNALRGTVFEIGYRGDMSIYKLLLAGRSVMKVAVANT
                     GEAGKTTFAVNELVWLSWPPEAGVVLAE"
BASE COUNT          456 a          585 c          565 g          314 t
ORIGIN      
        1 tcagcgcgat ggcggcgagc gttccaagga cggttgcggc ggtggccgac agggcagcga
       61 ctcgcacgct gatccaggcg gcctgttgga tggccgtgtc gtgcagcagc tcgcgatacc
      121 agacgagcga ccagccgccc cagacggtga ccagccgcga ggcattaaac gaatagatga
      181 caaggatggc gatcggcaag taaaggaatg cgaggccaaa agcgaccgca acgacgttga
      241 agagcgaagc accacgcttc atcagcggcc tccttccagc gagccacgct gaagacgctc
      301 gtagaaaagg atcggcacga gcaacagcac cagcaacgtc accgcgatgg cagaggcaac
      361 aggccagtcg cgattggaga agaattcggt ccacaatgtt tgcccaatca tcagcgtctc
      421 cgacccgccg agcagatcgg gaatgacgaa ctcaccgata atgggaatga agcaaagcag
      481 cgcaccggcc gccgctccac gcatcgacag cggcacggtg accagccaaa acgacttcca
      541 tcggggacag ccgagatcag cggccgcctc cagcaagctc acgtccatct tctcgagcgt
      601 ggcgtagagc ggcagcacca tgaacggcaa ataagaatag accatgccga tatagatcgc
      661 ggtgtcggat gatagccagg tcaatggtgc gtcgatgatg tgcagtttca tcagcacatc
      721 gttcagcaat ccatcccgct gcagaatgtt gatccaggca tagacgcgta tcagaaacga
      781 cgtccagaac gggagcacaa cggccatcac cagaagcggc tgaacgcctc ggggcgaacg
      841 cgcgatgcca tatgcgaagg gatagccgat caccagcagg atgatggtcg agatgcaggc
      901 gacctgcagg ctcttgagat acgacagcag atagatcgtg tcggaaaaca gcagacgaaa
      961 tgaatcaatc gagagtccac tgacaaattc gaccagacct gcccaaccgc tcgaaatgtc
     1021 gaaaacaggc acataaggag gctgcgcaag cgcggtttgg gagaggctga tcttgagcac
     1081 gatcaggaac ggcacgagaa aaaaggcgac aagccaaaga tagggcagca gtacggtcgc
     1141 ccgcgcattc ctgcgttgcg taggctccat tgccatcgct actccgccaa gaccacgcca
     1201 gcttcaggtg gccacgacag ccagaccagc tcattgactg cgaatgtagt tttgccggcc
     1261 tcgcctgtgt tggcgaccgc gactttcatg acggaacggc ctgcaagcag cagcttgtag
     1321 atagacatgt cgccgcggta cccgatttcg aacacagtac cgcgcagcgc attgagcttt
     1381 tcgttcgggc gctcgctact caagctgatt ttttcgggac gcaaggccag cgagaccggg
     1441 tcgccggccc ttcgcttgtc ggccgtcacg atccttagct ggcccaacgc ggtgtcgata
     1501 cttccgcccg cgttcatgtt cccctcgatc aggttcacct cgccgatgaa cccggccagc
     1561 caacgcgagc atggccgttc ataaatctcg gccggcggcg cgacctgcat cagccggcca
     1621 tgattcatga cggcgatccg gtcggccaca atcattgcct cttcctggtc gtgggtgacg
     1681 atgacgaacg ttgtgccaag cttgcgctgc aactccatga gctcgaactg cgtctccgcg
     1741 cgcagcttct tgtcgagcgc ggccaacggc tcgtccagca gaagaacgcg cggatgcttg
     1801 atcagcgagc gcgcgagcgc gacccgctga cgctgacctc ctgagagctg gtcgatgcgc
     1861 cggccgccca aaccttccag tcgcacgagc gccagcattt ccgcgacacg ctgcgcaatt
//
LOCUS       DATDHO010000495         2936 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_23391, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000495 DATDHO010000000
VERSION     DATDHO010000495.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2936)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2936)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2936
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23391"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..236)
                     /locus_tag="VIY07_09455"
     CDS             complement(<1..236)
                     /locus_tag="VIY07_09455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S26 family signal peptidase"
                     /protein_id="HEY6382016.1"
                     /translation="MSVTSGTKRKEGGIAETVRVIIHALIIALVIRTFLFQPFNIPSG
                     SMKATLLVGDYLFVSKYTYGYSKYSLPLSPPVFSG"
     gene            complement(358..777)
                     /gene="acpS"
                     /locus_tag="VIY07_09460"
     CDS             complement(358..777)
                     /gene="acpS"
                     /locus_tag="VIY07_09460"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEY6382017.1"
                     /translation="MIIGLGSDIVDVRRIADVIERHGERFLGRIFTATERDKAERRAN
                     TVETYAKRFAAKEACAKALGTGLRRGVFWRDMGVVNLAGGRPTMKLTGGALTRLQAIT
                     PPGCEARIDVSLTDEGPTAQAIVIISAVPANPRGASR"
     gene            complement(774..1526)
                     /locus_tag="VIY07_09465"
     CDS             complement(774..1526)
                     /locus_tag="VIY07_09465"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEY6382018.1"
                     /translation="MKRLRLGVNVDHVATIRNARGGRHPDPVRAAKLAIAAGCDGITA
                     HLREDRRHIRDDDIARLKAELDKPLNLEMAATKEMVGIALKTRPHAVCLVPEKRTERT
                     TEGGLDAAGQREQLAPVVHELKHAGIRVSLFIGAAPAQIETAAALGAPVVEIHTGSWC
                     DALAEGRSAEASAEWQLIRDGAQLAAGLGLEVHAGHGLDYGTAETIATLPEVVELNIG
                     HFLIGEAVFEGLAETVKFMRAAMDRGRKKAHA"
     gene            complement(1530..>2936)
                     /locus_tag="VIY07_09470"
     CDS             complement(1530..>2936)
                     /locus_tag="VIY07_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RelA/SpoT AH/RIS domain-containing protein"
                     /protein_id="HEY6382019.1"
                     /translation="VDSVEDCYRALGAIHTTWSMVPGRFKDYISTPKQNDYRSIHTTV
                     IGPGKQRVELQFRTEAMHEIAEYGIAAHALYKDHVGSPTELLSRESTAYAWLRRTIEL
                     LAEGSNPEEFLEHTKLELFHDQVFCFTPKGKLIALPRKATPIDFAYAVHTDIGNTAVG
                     CKINGKIAPLTSELVNGDEVEIVSSKAQAAPPAAWESIVVTGKARAAIRRATRAAVRR
                     QYAGLGRRIVERLFQRAKIAYSDESLTGALPRLARASVDDVMAAVGRSELKASDVARA
                     MYPDYKEERAAAMAAKPKSESGWFGLKKLTSVKFRLPDNAEGPAIPIRGINGDLPVRF
                     APDGGAVPGDRIVGILTPGEGITIYPIQSPALSEFEDNPERWLDVRWDEEEQAPRRFP
                     ARIAVQSVNEPGSLAQIAQVIAEHDGNIDNIRMTRRAPDFTDVTIDLEVYDLKHLTAI
                     LAQLRAKPVVAKAERVNG"
BASE COUNT          532 a          926 c          895 g          583 t
ORIGIN      
        1 ccggagaaca ccggcggcga caacggcagc gagtatttac tgtagccata ggtgtacttc
       61 gagacgaaca ggtagtcacc gacgagcaat gtcgccttca tcgagccgga tggaatattg
      121 aacggctgga acaggaaggt cctgatcacg agggcgatga tgagcgcatg aatgatcacg
      181 cgcacggttt cggcgatacc gccctctttt cgctttgttc cggatgtcac actcattggc
      241 ctctcatccc gccaaaccgc acacacgccc cggcgacctt gtagcggctg agactgtggc
      301 aggcaatgaa caaggccgga aagttacaaa cgtttgatcc gattggagga cctattttca
      361 acgcgaagct ccccgcggat ttgccggtac cgcggaaata atgacgatgg cctgtgcggt
      421 tgggccttca tccgtcagcg agacatcgat tcttgcttcg caacctggtg gtgtgatcgc
      481 ctggagacgc gtgagcgcgc caccggtcaa cttcatcgtg ggccggccgc cggcgagatt
      541 caccacgccc atatcgcgcc agaaaactcc gcgccttaac cccgtgccaa gcgccttggc
      601 gcaggcctcc tttgcagcga aacgtttggc gtaggtttcg acggtatttg cgcggcgctc
      661 ggccttgtcc cgttcggtcg ccgtgaaaat gcggccgaga aagcgctcgc cgtggcgctc
      721 gatgacgtcc gcaatccttc gcacgtcgac aatgtcggaa ccaagcccaa taatcatgcg
      781 tgcgctttct tgcggccacg gtccattgca gcacgcatga atttaaccgt ctcggcaaga
      841 ccctcgaaca ccgcttcgcc aatcagaaag tgtccgatat tgagttcgac cacctccggc
      901 aaagttgcga tcgtctccgc cgtaccatag tcgagcccgt ggccggcatg cacctccaat
      961 cccagacccg cagcaagttg cgcaccatcg cgaatgagtt gccactcggc acttgcctcg
     1021 gcggatcgac cttcggccaa cgcgtcacac caggaaccgg tgtgaatttc gacgacagga
     1081 gcgcctagcg cggcagcggt ctctatttgg gcgggcgccg ctccgataaa gagcgaaaca
     1141 cggataccgg catgcttgag ctcatgcacg acaggagcaa gctgttcgcg ctggccggcc
     1201 gcgtcgaggc ccccttcggt cgttcgttcc gtccgttttt ccggcacgag gcataccgcg
     1261 tgcggcctgg tcttgagcgc aatgccgacc atttccttcg tcgcagccat ctccagatta
     1321 agcggtttgt ccagttccgc cttcagccgc gcgatgtcgt cgtcgcgaat atgccggcga
     1381 tcttcgcgca gatgagccgt gatgccgtcg caaccggccg cgatcgcgag cttggctgca
     1441 cgcacaggat cgggatgacg cccgccgcgg gcattgcgga tagttgcaac gtgatcgaca
     1501 ttgacgccaa ggcgcagacg tttcatgcgc tagccgttca cgcgttcagc cttcgccacg
     1561 accggttttg cgcgcaactg cgcgaggatg gcggtgagat gcttgaggtc gtagacctcg
     1621 agatcaatcg tgacatcggt gaaatcgggc gcgcgcctcg tcatgcggat attatcgatg
     1681 ttgccgtcgt gctcggcgat cacttgcgct atctgcgcca gtgagcccgg ctcgttcacc
     1741 gattgtaccg caatccgtgc aggaaagcgc cgcggcgcct gctcttcttc gtcccagcgc
     1801 acgtccagcc accgctcagg attgtcttcg aactcgctca gcgcgggcga ctggatcgga
     1861 tagatggtga tgccctcccc cggcgtgaga atcccgacga tcctgtcgcc gggcactgcg
     1921 ccgccatcgg gagcgaaacg caccggcagg tcgccattga tgccgcggat cgggatcgcg
     1981 ggaccttccg cattgtcggg cagcctgaac ttgaccgagg tcagtttctt caggccgaac
     2041 cagccgcttt ccgatttggg ctttgccgcc attgcggcag cgcgttcttc cttgtaatcg
     2101 gggtacatcg cgcgggcgac atcggaggcc ttcaactcgc tgcgtcccac cgccgccatg
     2161 acgtcatcga ccgacgcgcg cgcgagccgg ggcagcgcgc ccgtgagact ttcatccgag
     2221 tatgcgattt tcgcgcgctg gaagaggcgc tcgacaatgc gccggccaag cccggcatat
     2281 tgtcggcgca cggcagcccg ggtggcgcgc cggatcgccg cacgcgcctt gccggtgacg
     2341 acgatcgatt cccaggcggc gggcggtgcc gcctgcgcct tcgagctcac gatctcgact
     2401 tcgtcgccgt tgacgagctc ggacgtaagc ggcgcgattt tgccgttgat cttgcaaccg
     2461 accgcggtgt tgccgatgtc ggtatgcacc gcataggcga aatcgatcgg ggtcgccttg
     2521 cgaggcaagg caatgagctt gcccttgggc gtgaaacaga acacctgatc gtgaaataat
     2581 tcgagcttcg tgtgctcgag gaattcttcc gggttcgagc cctccgccag cagctcgatg
     2641 gtgcggcgca gccaggcata ggcggtcgac tcgcgagaca gcagctccgt cggcgaccct
     2701 acgtgatcct tgtaaagcgc atgggccgcg atgccgtatt cggcgatctc gtgcatcgcc
     2761 tcggtgcgga actgcaactc gacgcgctgc ttgcccggtc caatgaccgt ggtgtgaatc
     2821 gagcgatagt cgttctgctt gggcgtcgag atgtagtcct tgaagcgccc gggcaccatc
     2881 gaccacgtcg tgtggatggc gccgagcgcg cggtagcagt cctcgacgct gtcgac
//
LOCUS       DATDHO010000496         1676 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_465910, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000496 DATDHO010000000
VERSION     DATDHO010000496.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_465910"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1663
                     /locus_tag="VIY07_09475"
     CDS             <1..1663
                     /locus_tag="VIY07_09475"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEY6382020.1"
                     /translation="KKRLEHANMLLNATLANMPHGICMFGEDERLVLANDLYSTMYGL
                     DPNKMKPGTTLPQILEARVASGCCPLDSQKYINDRMAEAFRTEPGYVVNELQDGRTLA
                     VSRRSMPDGGSVAVHQDITAHLHAEKELNETKQFLNSIIENIPIPVVAKDVTTRKFIL
                     VNRTFESMLKVSRTEVLGKTVFDIYRTKDAERIDAADNSALAADVGAHSNDYEIEMPG
                     GESRILATNRIVVRDSEGSAKHLVVVIDDITERKKSEQRIAFMAHHDVLTGLPNRLAV
                     MEKIEEAVARHRRRGDSFAILLLDLDRFKHVNDTLGHAVGDTLLRETASRLKASLRET
                     DVLARLGGDEFAIVQDSESSQREAASALASRVIEIVSRPFNIEGNEVNIATSVGIALG
                     PEHATNSDSLMKMADLALYRAKSAGRDGYRFFDPEMSMAASARHELENELRRALQQDE
                     LELQYQPIVDTKTLQICGAEALIRWRHPTKGIILPDQFIPLAEETGMITQIGEWLLQT
                     ACTDAAGWPVDIKVAVNLSAVQFRKITLSMWCCVRLRRLDCRRSS"
BASE COUNT          413 a          454 c          487 g          322 t
ORIGIN      
        1 gaaaaagcgt ctcgagcacg ccaatatgct gctgaacgcg acgctggcaa acatgcctca
       61 cggaatctgc atgtttggcg aggacgaaag gctcgttctc gccaacgatc tctacagcac
      121 gatgtatggg ctcgatccga acaaaatgaa gcccggcacg accctgcctc agattctgga
      181 agctcgggtc gcgtccggat gctgtccgct ggactcgcaa aaatacatca atgaccggat
      241 ggcggaggcg ttccgcaccg agccgggtta cgtcgtcaat gaacttcagg acggacgcac
      301 actggcggtg agccggcgat caatgccgga tggcggatcc gttgcggttc atcaggacat
      361 cacagcgcat ctgcacgctg aaaaggagct caatgaaacg aagcaattcc tcaattccat
      421 cattgaaaat attccaattc ccgtcgtcgc gaaggacgta acgacgcgga agtttattct
      481 ggtcaatcga actttcgagt cgatgctgaa agtctcgcga accgaagttc tcggaaagac
      541 ggtattcgac atctatcgca cgaaggacgc cgaacgaatc gatgctgcag acaacagcgc
      601 tctcgcggca gacgtggggg cacattccaa cgactatgag atcgaaatgc cggggggcga
      661 gtcacgcata cttgccacaa atcgcattgt cgttcgcgac agcgagggta gcgccaagca
      721 tctggtggtt gtcatcgacg atattaccga aaggaaaaaa tcggagcagc gcattgcgtt
      781 catggcccat cacgacgttc taacgggtct cccgaatcgc ttggcggtta tggagaaaat
      841 tgaagaggcg gtcgcacggc accgaaggcg cggcgattcg tttgccatac tattattgga
      901 tctggacagg tttaagcatg tcaacgacac gctcggtcac gcagtggggg acaccctgct
      961 gcgggaaacg gcgtcgcggc ttaaggcgtc actgcgcgaa accgacgtat tggcaaggct
     1021 gggcggcgac gaattcgcca tcgttcagga cagcgagagc agccagcgcg aagccgcgag
     1081 tgcgcttgca agccgcgtca tcgagattgt ctcccggcca ttcaacatag aagggaacga
     1141 ggtcaacatc gcgacaagtg tcggcattgc cttgggcccc gaacatgcga ccaattccga
     1201 cagccttatg aaaatggccg atctggctct ctatcgcgcg aagtcggccg gtcgggacgg
     1261 ataccggttc ttcgaccctg aaatgagcat ggccgcaagc gcgcggcatg agcttgagaa
     1321 cgagttacgc cgtgcgctcc agcaggatga attggaactt cagtaccagc caatagtaga
     1381 taccaaaact cttcagattt gcggggcgga agcactgatc cggtggcgac accccaccaa
     1441 gggcatcata ttgcctgacc agttcattcc gcttgcggaa gaaaccggaa tgataaccca
     1501 aataggcgag tggctgctgc aaaccgcctg caccgacgct gccggctggc cggtggacat
     1561 caaggtggcc gttaatctgt cagccgtgca atttcgaaaa ataaccttgt cgatgtggtg
     1621 ctgtgtgcgc ttgcgcagac tggattgccg ccggagcagc tagagcttga aatcac
//
LOCUS       DATDHO010000497         2806 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_123412, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000497 DATDHO010000000
VERSION     DATDHO010000497.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2806
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123412"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..829
                     /locus_tag="VIY07_09480"
     CDS             17..829
                     /locus_tag="VIY07_09480"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382021.1"
                     /translation="MTKPEARASSSDYLRRIAAFQGASRIRPGMIAVLRHFASFAENL
                     LDRMLLWSGLFKAERIEFHGQEQMVAQMAEKRGGLLICSHLGNLDLCRVLSKRAGFKL
                     TVLVHTKHAEAFNRLLARLDPASQLNLLQVTEVSAATVALLSEKIGRGEFVAIAGDRI
                     PVSSNPRIASASFLGDMAPFPVGPYILANLLGCPVYLLFSLRAGRASEIHFELFRESV
                     FLPREGRDQALAELVADYARRLEYFCLRAPLQWFNFYDFWRLSAVDTPDASC"
     gene            884..2377
                     /locus_tag="VIY07_09485"
     CDS             884..2377
                     /locus_tag="VIY07_09485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid ammonia-lyase"
                     /protein_id="HEY6382022.1"
                     /translation="MEDIVDIAEGSARVALSEAAAFHSSIKRGADFLDRLLRQEGTIY
                     GVTTGYGDSCTVTVPPELVAELPRQLYVYHGCGLGEYLSPVQTRAVMATRLTSLCKGF
                     SGVSLELLQQIARLLQCDLLPLIPSEGSVGASGDLTPLSYLAAVLCGEGEVWRSGVHV
                     SAARALAEAGITPLRLRPKEGLAIMNGTAVMTALACLAYVRAAYLTQLVTRITALASF
                     ALDGNARHFDATLFAVKPHPGMQRVAGWLRQDLRCDQLDLKKERLQDRYSVRCAPHVI
                     GVLADALPWLRDSIENELNGANDNPIIDAENQGVLSGGHFYGGHIAFAMDSMKNAVAN
                     LADLLDRQMALLVDCRYNNGLPPNLSGVQGPRAAINHGLKGLQISASAWTAEALKLTM
                     PASVFSRSTECHNQDKVSMGTIAARDCVRVLELTEQVAAALLIAVRQGVWLRCRLNPS
                     VAPERKLRNMMDALGADIRVIEEDRKLEPDLRLLLERIRGRFWKLYE"
     gene            2370..2798
                     /locus_tag="VIY07_09490"
     CDS             2370..2798
                     /locus_tag="VIY07_09490"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEY6382023.1"
                     /translation="MNKSRGRWSAESDIQVQFFDLDPMEVVWHGHYVKYLEMARCALL
                     DTIDYNYAQMKASGYAWPIIDMHLRYVDSARFGQRLKVHAEIVEWENRLKIDYLIIDP
                     ASGRRLLRASTTQVAVDMATREMCFVSPAVLFQKLGISPS"
BASE COUNT          529 a          769 c          847 g          661 t
ORIGIN      
        1 cttgctgtgg tacctggtga ccaaacccga ggcgcgcgca tcgtcaagcg attacctgcg
       61 gcggattgct gcgtttcagg gcgcttctcg aatccgcccc ggcatgatcg ccgtgttgcg
      121 ccactttgcg tcattcgccg agaacctgct tgatcgaatg ttactgtgga gcggcttgtt
      181 taaagccgaa cgcatcgagt tccacggtca ggaacaaatg gttgcccaaa tggctgagaa
      241 gcgcggcggc ctgctgattt gctcgcatct cgggaatttg gatttgtgtc gagtactgtc
      301 caagcgggcc gggttcaaat tgacggtgtt ggttcacacc aagcatgcag aggcattcaa
      361 tcgtttgttg gcccggctcg atcccgcgag tcagctcaat ctcctacaag tgaccgaggt
      421 gtccgcggcg acagtcgcgc tgctctccga gaaaatcgga cgtggtgaat ttgtggctat
      481 tgccggcgat cgcattccgg tatcgtcaaa tcctcggatt gcctcggcta gcttcctggg
      541 agacatggcg ccctttcccg ttggacccta cattttggcg aacctgttgg gctgtccggt
      601 ttatctgctg ttttctctgc gtgccgggcg ggcatcagaa attcacttcg agctgttccg
      661 tgagtcggtt tttttgccgc gtgagggtcg cgatcaggcg ctcgccgaac tggtggcgga
      721 ttacgcgcga cggctcgagt atttctgcct gcgcgcgccg ttgcaatggt ttaactttta
      781 cgatttttgg cgtttatccg cggtggacac acctgatgca tcttgctgag ctgaagacgt
      841 cagcctttcc cgcacgattg cattcgacca tggatggctg aaaatcgaag acatcgtcga
      901 tatcgctgaa ggttcggcta gggtcgcgtt gtccgaggct gccgcatttc actctagcat
      961 caagcgaggg gcggacttcc tggaccgtct gctccgccaa gagggcacga tctatggcgt
     1021 tactacgggc tacggcgatt cctgcacggt gacggtcccg cctgagctgg tcgccgagtt
     1081 gccgcgccag ctctatgtct atcacggctg tggactgggc gagtatttga gtccggtgca
     1141 gacgcgcgcc gttatggcga cccgcctcac gtcgttgtgc aaagggtttt ctggcgtgag
     1201 cctggaattg ctgcaacaaa tcgcgaggtt actccagtgc gacctattgc cattgattcc
     1261 ctcggagggc tccgtgggtg ccagcggcga tctcactccg ctgtcgtacc tcgcggcggt
     1321 tttgtgcggc gagggcgagg tttggcgcag cggcgtccat gtcagcgccg ctcgggcact
     1381 ggccgaggcc ggtatcacac cgctgcgtct gaggcccaaa gagggattgg cgatcatgaa
     1441 tgggacagcg gttatgaccg ctttggcctg cctggcttat gtgcgagctg cttatctcac
     1501 tcaactggtc acacggatca ccgctttggc gtcctttgcg cttgacggca atgcgcgcca
     1561 tttcgatgcc acgttgttcg ccgtgaaacc gcatccaggc atgcagcggg tagccggttg
     1621 gttgcgtcaa gacttgcggt gcgatcagct ggacctgaaa aaagagcgcc tgcaggatcg
     1681 ctattcggta cgttgcgcgc cccacgtgat tggtgttcta gccgacgcgc tgccatggtt
     1741 gcgcgactcc atcgaaaatg aactcaacgg tgccaacgac aaccccatca tcgatgcaga
     1801 aaaccaaggg gtgttgtctg gcgggcactt ttatggcggg catatcgcgt ttgccatgga
     1861 cagtatgaaa aatgccgtcg ccaacctggc ggatctgctt gaccggcaga tggcactgct
     1921 ggtggattgc cgctacaaca atgggctgcc gcccaacttg tccggggttc aagggccacg
     1981 cgccgcgatc aaccatgggc tcaaggggtt gcagatcagt gcttcagcct ggactgccga
     2041 agcgctcaag ttaaccatgc cggcgtcggt cttctcgcgt tctaccgagt gccataatca
     2101 ggacaaagtc agtatgggta ccatcgcggc acgcgattgc gtgcgtgtcc tcgagttgac
     2161 ggagcaagtt gccgccgcgt tgttgatcgc cgtacgacaa ggcgtctggc tccgttgcag
     2221 attgaatcca tccgtcgctc cggagcggaa gctgaggaac atgatggacg ccttaggcgc
     2281 cgatattcgt gtaatcgaag aggatcgcaa gctggaaccg gatctgcggt tactgctgga
     2341 gcgcatccgc gggcgcttct ggaaactgta tgaataagtc gcgaggccgc tggtcggcgg
     2401 agagcgatat acaagtccag ttttttgatc ttgatccgat ggaagtcgtt tggcacggcc
     2461 actacgttaa atacctggaa atggcccgtt gcgccctgct cgacacgatc gattacaatt
     2521 acgcgcagat gaaagcatcg ggttacgcct ggccaatcat tgatatgcac ttgcgctacg
     2581 tggattcggc caggttcggg caacggctca aggtgcatgc cgagattgtc gaatgggaaa
     2641 accgcctgaa aatcgattat ctgatcatcg atcccgccag cggacgccgg ctccttcgcg
     2701 ccagcacgac gcaagtcgcc gtcgatatgg cgacgcgcga aatgtgtttt gtatcacctg
     2761 cggtgctatt tcaaaaattg ggaatttcac cttcatgaaa ttttgc
//
LOCUS       DATDHO010000498         2131 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_370014, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000498 DATDHO010000000
VERSION     DATDHO010000498.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2131
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370014"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..334)
                     /locus_tag="VIY07_09495"
     CDS             complement(<1..334)
                     /locus_tag="VIY07_09495"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEY6382024.1"
                     /translation="MAADSASDETESRRRRVSASDKGVVDIAGDALKEIAVLLQTELQ
                     LLRVELAEKLTFTALSVALIGAGLVLLMATIVLLLQAAVTGLVAYGFSWPIATLMVAT
                     ATLIIGAGL"
     gene            complement(437..1615)
                     /locus_tag="VIY07_09500"
     CDS             complement(437..1615)
                     /locus_tag="VIY07_09500"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6382025.1"
                     /translation="MLQRTHIGSTARPGITLRIASRDEISALPHWRSAFADERKDHRY
                     YELVEDTLRDEFKYGYLIVEDDHAVRAIQPFFVVDQDLLAGMSPRFKQMLARIRGRWP
                     RFMYARTLMVGCAAGEGHLDGDDATRLATAEAFGRFLPGVASNLNCAMIVLKEFPVKY
                     RAPLQRLMDAGFARVPSMPMTTLDIGYRNFEDYVSNCLSPRTRGKVRRKLRVAERAQP
                     AITVEVVTDAAPYVDDIYPLYEKVFERSPLQFEKLTREFLGDIGRRIPDKVRSFIWRQ
                     GSQIIAFGLCTVQGDRICHEYVGFDYAVAFDLNLYYRVFRDIVEWAIANGYKRFYSGS
                     LNYDPKWHLRHSLHPVDLYVRHTSAPINAVFKRLLPLMQPTWSDPILPHFHNYRELWD
                     "
     gene            complement(1646..>2131)
                     /locus_tag="VIY07_09505"
     CDS             complement(1646..>2131)
                     /locus_tag="VIY07_09505"
                     /inference="COORDINATES: protein motif:HMM:NF013232.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphorylase"
                     /protein_id="HEY6382026.1"
                     /translation="GVTSGKGVFATDRTWTQRLLEMLPGAVHAHVAGANEVVQSPREK
                     WQLYDETRAAAVDMESHIAAEIAAEHRIPFAACRVILDAAHRMLPPAATLGLRLDGTP
                     NVPAVFRSVVQKPAQLPNLLRVAIDHHIAGRALRSGRRQLGVGLGFPYYNDIAFDRAF
                     A"
BASE COUNT          437 a          623 c          654 g          417 t
ORIGIN      
        1 tgagacctgc cccaatgatg agagtggccg tagccaccat cagcgtcgca attggccagg
       61 agaagccgta agccacgagt ccggtaaccg cggcttgcag caggagaacg atcgtcgcca
      121 tcagaagcac caagcccgcg ccgatcaggg cgactgacag cgcggtaaat gtgagcttct
      181 cggcgagctc cacgcgcaga agctgcaact cggtctgcag caagactgca atttccttca
      241 gtgcgtcgcc ggcgatatcc acgacccctt tgtcgctcgc gctcacgcga cgccgccggc
      301 tctccgtttc atcggatgcc gaatctgccg ccattgcgcc ctccgaggcg gcatcatgcc
      361 gctcggggtg ataacggcgg ttccgagttc tggttcctgg gaagacctta tgcggcaaaa
      421 ggacttgggc cgcgtctcag tcccaaagct cgcggtaatt gtggaagtgg ggaaggatcg
      481 gatcggacca tgtcggctgc atcaggggaa gcagccgttt gaacacggca ttgatcggag
      541 cggacgtatg ccggacgtaa agatcaacgg ggtgaagcga gtgtcgcagg tgccatttcg
      601 ggtcgtagtt gaggctgccg ctgtagaaac gtttatagcc gttcgcgatg gcccattcga
      661 cgatgtcgcg aaagacgcga tagtaaagat tgaggtcgaa ggcgacggca taatcgaatc
      721 caacatattc gtggcagatg cggtcgccct gtacggtgca taggccgaac gcgatgattt
      781 ggctgccctg gcgccatata aaagatcgca ccttgtccgg aatccggcgt ccgatgtcgc
      841 caaggaattc cctggtgagc ttttcgaact gaagcggcga gcgctcgaat actttttcgt
      901 aaagcggata gatgtcgtcg acgtagggcg ccgcatcggt cacaacctcc acggtgatcg
      961 caggctgggc ccgctcggca acgcgcaatt ttctccgcac ctttccgcgc gtgcgcgggc
     1021 tgagacaatt ggagacgtaa tcttcgaagt tcctgtagcc gatatcgagt gtcgtcatcg
     1081 gcatgctggg aacgcgggcg aagccggcat ccatcaggcg ctgtaacggc gcgcggtatt
     1141 tgaccggaaa ttccttcagc acgatcatcg cgcagttcag gttgcttgca acgccgggca
     1201 aaaatcgtcc gaatgcctcg gctgtcgcga ggcgggttgc gtcatcgccg tcgagatgtc
     1261 cttcgcctgc cgcacatccg accatcaatg tgcgtgcata catgaagcga ggccatcgac
     1321 cccgaatccg ggcgagcatc tgtttgaagc gcgggctcat tcccgcaagg agatcctggt
     1381 caacgacgaa aaatggctgg atggcccgca cggcgtgatc atcctcgacg atcaaatagc
     1441 cgtacttgaa ttcatccctc agcgtgtctt cgaccagttc gtaatagcga tgatcctttc
     1501 gctcatcggc gaaagccgat cgccaatgcg gcaaggcgga aatctcgtcc ctggaagcaa
     1561 ttctgagcgt tatgccggga cgtgccgtcg agccgatgtg agttcgctga agcatcgatg
     1621 catgcaacgc tgcacggcgc tgctgtcagg caaaagcgcg gtcgaatgca atatcgttgt
     1681 agtaaggaaa gcccaagccc acgcccagtt gcctgcggcc cgaacgcaac gctcgccccg
     1741 cgatgtgatg atcgattgcg acccgcaaca gattgggaag ttgcgccggt ttttgcacga
     1801 ccgagcggaa tacagccggc acgttcgggg tgccgtcgag acgcaagccc agcgtcgcgg
     1861 cgggcggaag cattctatgt gcggcatcga ggatcacgcg gcaggcggca aacgggatcc
     1921 ggtgctccgc cgcgatttcc gccgcgatgt gcgattccat gtcgacggca gccgcccggg
     1981 tttcatcgta aagctgccat ttttcccgcg ggctctgcac cacttcgttc gcccccgcga
     2041 catgcgcgtg aacggcgccg ggcagcattt caagcagtcg ttgcgtccag gtccggtcgg
     2101 tggcgaaaac acctttgccg ctggtgacgc c
//
LOCUS       DATDHO010000499         3279 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_69724, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000499 DATDHO010000000
VERSION     DATDHO010000499.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3279
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69724"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(17..934)
                     /locus_tag="VIY07_09510"
     CDS             complement(17..934)
                     /locus_tag="VIY07_09510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM44-like domain-containing protein"
                     /protein_id="HEY6382027.1"
                     /translation="MIRRRFSIAIAAIIACLLIVADAHARAGGGSSGGSRGTRTFSAP
                     PATQTAPNTAAPMQRTLAQPGKSNSVGQAAPRSGLFGGGILGGLAAGFLGAGLFGLLF
                     GHGLFGGMAGFASVIGLILQIALVVIVARLLFVWWQRRNAPAPAYAGAQPATGHSFSG
                     LGGMLGGNAPAAAALTIDKSDYDEFERLLGEIQTAYSDENLNALRAKVTPEMLSYFSE
                     QLAENASRGLVNKVTDVRLEQGDLAEAWNEGGVDYATVAMRFALTDRMVERASDRTVE
                     GGVPGEATELWTFMRARGGGWLVSAIQQT"
     gene            1117..1383
                     /locus_tag="VIY07_09515"
     CDS             1117..1383
                     /locus_tag="VIY07_09515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382028.1"
                     /translation="MKGFTVTAILLALTATAVAKPVPVKNLNPMEDLNPAFARVDVDI
                     NSGPAGAMLEREYFEAHRPPMNGGMPCRFQSAIFDKVRLAQLCR"
     gene            1483..1638
                     /locus_tag="VIY07_09520"
     CDS             1483..1638
                     /locus_tag="VIY07_09520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020487478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3309 family protein"
                     /protein_id="HEY6382029.1"
                     /translation="MLGTVLVIILILLLIGAIPRWGYSSGWGYGPSGILGVILIVVLI
                     LALTGRV"
     gene            complement(1644..>3279)
                     /locus_tag="VIY07_09525"
     CDS             complement(1644..>3279)
                     /locus_tag="VIY07_09525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6382030.1"
                     /translation="FGSDGTPGPSRTLALNRARGEGSDPQRAAEVRFMRFFQNTPMAI
                     ATVNKTGRIGRSNARFATTFEGLLGSDDRSILSVVIERDRPALEAAIRKATEGRSDIA
                     PVEAALTGSAERWANFFVLAVDEEDRDVETAIVYALETTAQRTLENRFQQQQKMESVG
                     QLAGGIAHDFNNVLSAIMMATDFLLNAHKPTDPSFKDIMQIKQNANRAAALVRQLLAF
                     SRKQTLRPQVLDLGETVSDLGMLLKRLIGEKVSLEIVHGRDLWPVKVDISQFEQVIVN
                     LAVNARDAMPDGGKLTLRTANVSAPECDSFAFKGMPKADYVLVEVSDTGMGIPAEIID
                     KIFEPFFTTKEVGKGTGLGLSTVYGIVKQTGGFVYADSESGRTAFRIFLPRYIPGADE
                     VLALPAGDAPAIAGALAAADTMARAATADLTGEGTILLVEDEEGLRALNARGLASRGY
                     TVLEAGNGLEAIETLEKHGHVDLVVSDVVMPEMDGPTLLKELRRRDPELKIIFVSGYA
                     EEAFNKNLPSQEQYAFLAKPFTLKQLVAEVKKTLMQ"
BASE COUNT          640 a         1008 c          972 g          659 t
ORIGIN      
        1 tccgctgaac gcacccttag gtctgctgaa tggcggacac cagccagccg ccgccacgcg
       61 cacgcatgaa ggtccacagc tcggttgcct cgcctggcac gccgccttca acggtgcgat
      121 cgctcgcgcg ttcgaccatc cggtcggtaa gcgcaaaccg catggcgacc gtcgcgtaat
      181 cgacgccgcc ctcgttccac gcttccgcga gatctccttg ctcgagcctg acgtcggtga
      241 ctttattgac aaggccgcgg cttgcgttct cggcgagctg ctcggagaaa taagacagca
      301 tctccggcgt gaccttggcg cgcagcgcgt tgagattctc gtccgagtac gcggtctgga
      361 tttcccccag cagtcgttcg aactcatcgt aatccgattt gtcaatcgtg agtgcggcgg
      421 cagccggtgc attcccgcca agcatcccgc caaggccgct gaaggaatgg ccggtcgccg
      481 gttgcgcccc cgcataggct ggagccggtg cgttacggcg ctgccaccag acaaacagca
      541 gccgggcgac aatcacgacc aatgcgatct gcagtatcag gccgatgacg gaggcgaagc
      601 cggccatacc gccgaaaagc ccatgcccga agagaaggcc gaacaagccg gcgccgagga
      661 agccggcggc gagaccgccg agtatcccgc caccaaacaa gccggaacgc ggcgccgcct
      721 ggccgacaga gttcgatttg ccgggctgcg cgagcgtgcg ctgcatcggg gctgcggtgt
      781 tcggcgcagt ctgggtcgca gggggggcgg agaaagtgcg tgtcccacgg ctgcctccgg
      841 aggatcctcc accagcgcgg gcatgcgcgt ccgcgacaat gagcaagcac gcgattatcg
      901 cagcaatcgc gattgaaaaa cggcgtcgga tcatgtggcc ctcccggcaa atgccggcca
      961 gagaatatgt ataggaactt caatttgtaa ggggccggca cgcgccacaa agtcgcggcg
     1021 gatgagaggc caattatcac agcaatatca tacgtcacgc cgggaacggg ccggccgggg
     1081 tgcctatttc cttgttacga gcaaggaggc taggccatga aaggctttac ggttaccgcg
     1141 atattgttag cgctgacagc aacagcggtc gcgaaacccg tgccggttaa aaacctcaat
     1201 ccgatggaag atctgaaccc ggccttcgcc cgcgttgacg tcgatatcaa cagtggcccc
     1261 gccggtgcga tgctggagcg agaatatttc gaggcgcacc ggccaccgat gaatgggggt
     1321 atgccttgcc gcttccaatc ggccattttc gacaaggtgc gcctcgcaca gctatgccgc
     1381 taataggttc agcacgggaa ccaagataac gggcaaatcg ttgttgccgg gcactatgca
     1441 gtggccgcat tcggccacat cgatgatcta tggggcgcaa ccatgctcgg tactgttctc
     1501 gtcatcatac tgattttgct cttgatcggc gcgattccgc gttggggcta cagctccggc
     1561 tggggctacg gtccatccgg cattctcggc gtcattttga tcgtggtgtt aattctggcc
     1621 ctgacgggtc gcgtctaggc ccgctactgc atcaaggttt tcttcacctc ggcaacgagc
     1681 tgcttgagcg tgaacggctt ggccaggaac gcatactgtt cctggctggg gagattctta
     1741 ttgaacgctt cctcggcata gccggacaca aaaataattt tgagctccgg atccctgcgg
     1801 cgcaattcct tcagcagggt cggcccatcc atttccggca tcacaacgtc cgaaaccaca
     1861 agatcgacgt ggccatgctt ctcgagcgtc tcgatcgctt cgaggccatt tccggcttcc
     1921 agtacggtgt atccccgcga tgccagcccg cgtgcgttaa gcgcgcgcag cccttcctcg
     1981 tcttctacga gaagaatcgt gccttccccg gtaagatctg cggtcgcagc gcgcgccatt
     2041 gtgtcggccg ccgccaacgc acctgcgatg gcgggcgcgt ctcccgcagg aagcgcgaga
     2101 acctcgtcgg cgcccggaat ataccgcggc aggaaaatgc gaaatgcagt ccggccagac
     2161 tcagagtcag cgtaaacaaa gccgccggtc tgctttacga tgccgtacac ggtggacaac
     2221 ccgaggccgg tgccctttcc cacttctttg gttgtaaaga acggttcgaa aatcttgtca
     2281 atgatctcag ctggaattcc catgccggtg tcgctgacct cgaccagcac ataatcggcc
     2341 ttgggcatcc ctttgaaggc gaagctatcg cattccggcg ctgagacatt cgcagtgcgc
     2401 aaggtcagct tgcctccgtc gggcatcgcg tcgcgtgcgt tcaccgcgag attgacgatc
     2461 acctgctcga attgagaaat atcgaccttg accggccaga gatcccggcc gtgcacaatt
     2521 tccagcgata ccttttcgcc aatcaggcgc ttgaggagca tccccaggtc actgaccgtt
     2581 tcgccgaggt cgagaacttg cggccgcaaa gtctgtttgc gcgagaatgc cagcaattgc
     2641 cgcacgagcg ctgccgcacg attggcattc tgcttgatct gcatgatgtc cttgaaggac
     2701 ggatcggtcg gtttgtgagc attgaggaga aaatcggttg ccatcatgat ggccgacagg
     2761 acattgttga aatcgtgggc gatgccgccc gcgagttgtc caaccgattc catcttttgt
     2821 tgctgctgaa agcggttctc gagcgttcgc tgcgccgttg tttccagcgc atagacgatc
     2881 gcggtttcaa cgtcccgatc ctcttcatcg acggccagca cgaagaagtt tgcccagcgc
     2941 tctgcactgc ccgtcaatgc agcttccacc ggcgcgatgt cgcttcggcc ttcggttgct
     3001 ttgcgaattg cggcttcgag cgccggccgg tcgcgctcta tcacgactga taaaatagaa
     3061 cggtcgtcgc tcccgaggag cccttcgaaa gtcgtggcaa agcgcgcgtt gctgcgcccg
     3121 atgcggcccg tcttgttcac ggtggcgata gccatcggcg tgttctggaa aaatcgcatg
     3181 aagcgaactt ccgcggcccg ctgtgggtcg ctgccctccc ctctcgcacg gttaagagca
     3241 agcgtgcggg atggacccgg cgtgccgtcg gacccgaat
//
LOCUS       DATDHO010000500         1625 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_23684, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000500 DATDHO010000000
VERSION     DATDHO010000500.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1625)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1625)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1625
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23684"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..667
                     /gene="fmt"
                     /locus_tag="VIY07_09530"
     CDS             <1..667
                     /gene="fmt"
                     /locus_tag="VIY07_09530"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEY6382031.1"
                     /translation="VVAYGLLLPKPVLVAPRLGCFNVHASLLPRWRGAAPINRAILAG
                     DPQTGVSIMKMDEGLDTGPIAMQEPIAIAPDLTAGELHDALARLGANLMMRALAAAER
                     GSLQFTLQPQTGVTYAKKISNPETRLDWTKPWKEVHDRIRGLSPYPGAWFEIDGLRVK
                     ALRSSKGGGQGAPGTVLDDNLTIACGDGAVRLSHLQRAGKQPMTSEEFLRGMQIKPGT
                     RVN"
     gene            670..1407
                     /gene="truA"
                     /locus_tag="VIY07_09535"
     CDS             670..1407
                     /gene="truA"
                     /locus_tag="VIY07_09535"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEY6382032.1"
                     /translation="MPRYKLTLEYDGAPFAGWQIQADQRTVQGVLTAAIEALTGEKTL
                     VQGAGRTDAGVHARGQVAHVDLARNWDLDTVRDALNAHLRPHPVAILGAELVSDNFNA
                     RTSAIRRHYIYRIINRRPDLALEAGHAWRVPRPLDTDAMNIAAQRLVGKHDFTTFRST
                     ECQAKSPVKTLDVLSVERNGEEVTVTAVARSFLHSQVRSMVGSLEAVGEGKWSADDLS
                     RALAARDRTACGPVAPPEGLYLMRVDY"
BASE COUNT          310 a          514 c          510 g          291 t
ORIGIN      
        1 tgtcgtggcc tacggcttgc ttctgccgaa acccgttctc gtcgcgcctc gccttggctg
       61 cttcaacgtg catgcgtcac ttttgccgag gtggcgcggc gcggccccca tcaaccgcgc
      121 cattcttgcc ggcgatccac aaaccggcgt cagcatcatg aagatggacg agggcctcga
      181 taccggccct atcgcgatgc aagagcccat agccatcgca cccgatctga cggccggcga
      241 actccatgat gcattggcgc ggctgggtgc gaacttgatg atgcgcgcac tggctgccgc
      301 ggaacgcggg tcgcttcaat tcacgctgca gccacagaca ggggtcactt acgccaaaaa
      361 aatttccaac ccggagaccc gcctcgactg gacgaaacct tggaaggagg ttcacgaccg
      421 tatccgcggt ctgtcgccat atcccggtgc gtggttcgaa attgacggcc tgcgcgtgaa
      481 agccttgcgc tcgagtaagg gcgggggcca gggtgcgcct ggcacagtcc tggacgacaa
      541 cctgaccatc gcttgcggtg acggcgccgt gcggctctcg caccttcagc gggccggcaa
      601 gcagcccatg acctctgagg aattcctgcg ggggatgcag atcaagccgg gcacgcgagt
      661 gaactgagca tgccgcgcta caagctcacg ctcgaatacg atggcgctcc gttcgcaggg
      721 tggcagattc aggccgatca gcggactgtg caaggcgtgc tgaccgccgc gattgaagcg
      781 ctgaccggcg agaaaactct ggtgcagggc gccggacgca ccgatgccgg cgttcacgcg
      841 cgcggccagg tcgcccatgt cgatctcgcc aggaactggg atctcgacac agtgcgcgat
      901 gcgctcaacg cgcatctgcg gccgcatcct gtcgccattt taggtgccga gctggtctcc
      961 gacaatttca atgcgcggac gtccgcaatc aggcggcact acatttacag aattatcaac
     1021 cgccgacccg atctggcgct cgaggccggt cacgcttggc gcgtgccgcg tccgctcgac
     1081 actgatgcga tgaacatcgc cgcgcagcgc ctggtcggaa agcacgattt cacgaccttc
     1141 cggtcgaccg aatgtcaggc caagtcgccg gtgaagacgc tcgatgttct cagcgtcgag
     1201 cgcaacggcg aggaggtaac ggtgaccgcg gtggcgcggt cattcctgca cagccaggtg
     1261 cgctcgatgg tgggctcact ggaggccgtg ggcgaaggta aatggagcgc cgatgacctg
     1321 tcgcgcgcgt tggctgcccg tgaccgcacc gcctgtggtc ccgtggcgcc gccagagggc
     1381 ctatatttga tgcgggtgga ttactgaacc gtcgcacctc aattcgtctc cgcgtaggcg
     1441 aggaccagca cggccaactt ccagcggcaa aggctgtatg cccgctttcg cggacacgaa
     1501 cggagcatgg gacaggcacg ccgcacagct tacgtcttgc gcactcaagc ccgctaatga
     1561 caggttcaag aaaaataccg gtcgatgatt tttcgataga tcgtcgtcag cgcatgcaag
     1621 tccgc
//
LOCUS       DATDHO010000501         3149 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_420161, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000501 DATDHO010000000
VERSION     DATDHO010000501.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3149
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420161"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..373
                     /locus_tag="VIY07_09540"
     CDS             182..373
                     /locus_tag="VIY07_09540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382033.1"
                     /translation="MARIPTPELVKLKERIIELPEAEAKALYEWLTCVLEVREADRRA
                     EGRRNGKAPRRTHESLDPA"
     gene            351..1010
                     /locus_tag="VIY07_09545"
     CDS             351..1010
                     /locus_tag="VIY07_09545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382034.1"
                     /translation="MSHLIRPDLEALPGRLRQLPLDERGYPVPWFVDWLDGKPEFRAM
                     DPRKFVRAIKEKLCWVCGQRLGVHLAFVAGPMCGVNRTSSEPPCHLECAQWSARNCPF
                     LSKPDMVRREDGLMNKAALVEESAGFCITRNPGVVMVWITRQYEIFRPHAGNQAGYLL
                     QMGDPERVEWWCQGRTATRAEVDASIESGLPNLETMARLEPGGMRALERAVRRFERWL
                     P"
     gene            1007..1330
                     /locus_tag="VIY07_09550"
     CDS             1007..1330
                     /locus_tag="VIY07_09550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382035.1"
                     /translation="MISKYPGICIHCKRPTKAGVDHYDLDKKESYHAECRELAESGPT
                     ADEFAAAERCGYAAAAAIDTDEWFELYRNWHLLPLPPSSGSPAAGRAESEALRGPEPT
                     LFAKD"
     gene            1345..2079
                     /locus_tag="VIY07_09555"
     CDS             1345..2079
                     /locus_tag="VIY07_09555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382036.1"
                     /translation="MFQSTNVEVYLKSAVLDTDGDKRIAKAKFFITPIEYELACEISY
                     GIADRLFTGKNGDRAPSQEMTKADFVMSFPRYSMEFTRDPGYSEKHTLIPDVSITSLS
                     AQKLFADKSDFSLIFTASFEIGGDAGKTIVRDLIDLLHEKLFITFRASQGELFEKREP
                     VMDLACRLCGKENPEWATTDNKFAYCEAHNANIQEGERLKRIRDTAAARSLMREPGDE
                     PEQPHTDPLRDEAEFINQRGRRKKAR"
     gene            complement(2212..2463)
                     /locus_tag="VIY07_09560"
     CDS             complement(2212..2463)
                     /locus_tag="VIY07_09560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382037.1"
                     /translation="MPDMKLSAERLGIIQKLGAAVQQGEQMAQQGKMVADQARVEAEE
                     FLKMCAAAMGIEGYPETYDFQNDRFVPRLRVERRASPAG"
     gene            complement(2475..2780)
                     /locus_tag="VIY07_09565"
     CDS             complement(2475..2780)
                     /locus_tag="VIY07_09565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382038.1"
                     /translation="MAMTNVQTSQLRYDASLIQRTAVEIARAAQFVLAGGGSPPPGDA
                     MKANAKRAIADPVNESNKFMWYVVTDPQTQSNGSDPNATTDAQLQVIVSTTYPIVWA"
     gene            complement(2797..>3149)
                     /locus_tag="VIY07_09570"
     CDS             complement(2797..>3149)
                     /locus_tag="VIY07_09570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382039.1"
                     /translation="TASTTGAWIQYQGAGSGTLQDLFIGNSTNGYFIRSSGHLHPINN
                     NNYDLGAPNARMRVGYFGNIDNSGYSQFTEMADPAAGAANTARFYARDNGAGKTQLVV
                     RFNTGAVQVIATEP"
BASE COUNT          655 a          904 c          996 g          594 t
ORIGIN      
        1 gtcacgattt ccgaaaatct gcggcgactg gcggtccgga tcgaatatta ccggcggacg
       61 cccgacgatc tgacgtcgtt cagtcaagcg acggcgcgat taatgaagga tttcggcaag
      121 ccatgaacta ctacaggaaa tcagggctta tccaaacgaa aacgacaagt gaggaagtga
      181 tatggcgcgc ataccgacac cggaactggt caagctgaag gaacgcatca tcgagcttcc
      241 cgaagcggaa gccaaggccc tctatgaatg gctgacgtgc gtgctcgagg tccgcgaggc
      301 ggatcgccgg gccgaaggac ggcgcaacgg gaaggcgcca cggaggaccc atgagtcact
      361 tgatccggcc tgatctcgag gccctgccgg gccggctgcg ccaattgccg ctcgacgagc
      421 gcggctatcc cgtgccgtgg tttgtcgact ggctggacgg caagccagaa ttccgcgcca
      481 tggacccgcg gaagtttgtg cgggcgatca aggagaaact ctgctgggtt tgcggccagc
      541 gactgggagt ccatctggca ttcgtggccg ggccgatgtg cggcgtcaac cggacgtcat
      601 cggagccgcc ttgtcatctg gagtgcgccc agtggagcgc gcgcaattgt cccttcctga
      661 gcaagccgga tatggtccgt cgcgaagatg gtctgatgaa taaggccgcg ctggtggaag
      721 agtctgcggg gttttgcatc acgcgcaatc ccggcgtggt gatggtctgg atcacacggc
      781 aatatgaaat cttccggccg catgccggca accaggccgg atatctgctc cagatgggcg
      841 atcccgagcg cgtcgagtgg tggtgtcagg gcaggacggc aactcgggca gaggtggacg
      901 ccagcatcga gagcggactg ccaaatctgg aaacgatggc gcggttggaa ccgggcggga
      961 tgcgcgcgct cgagcgggcc gttcggcggt tcgagcgctg gctgccgtga tttcgaaata
     1021 ccccggcatc tgcatccact gcaagcgccc gacgaaggca ggagtcgatc actatgacct
     1081 ggacaagaaa gaaagctatc acgccgaatg ccgcgagctg gccgagtccg gaccgactgc
     1141 cgatgagttc gccgccgccg agcgctgcgg atatgccgcc gcggccgcca tcgataccga
     1201 tgagtggttt gagctatacc gaaactggca tctgctacct ttgcctccat ccagtggaag
     1261 ccctgcagcc gggcgggctg aatccgaggc actccgagga ccagagccca ctttgttcgc
     1321 aaaggactaa ataggagtcc cgctatgttc caatccacca acgtcgaagt ctatctgaag
     1381 tccgccgtgc tcgacaccga cggcgacaag cggattgcga aggcgaagtt cttcatcacg
     1441 ccgatcgagt acgaactcgc ctgcgagatc tcctacggca tcgccgaccg gctgttcacc
     1501 ggcaagaacg gcgatcgcgc gccgagccag gaaatgacga aagccgattt tgtgatgagc
     1561 tttccgaggt actcgatgga gttcacgcgc gaccccggct acagcgagaa gcacacgctc
     1621 attccggacg tctcgatcac gagcctttcc gcacagaagc tctttgccga caagtcggat
     1681 ttctccttga tcttcacggc gtcgttcgag atcggcggcg atgccggcaa gacgattgtg
     1741 cgcgatctga tcgacctgct gcacgagaag ttgttcatca cgttccgcgc gagccagggc
     1801 gagttgtttg aaaagcgcga acccgtgatg gatctcgctt gccggctgtg cgggaaagag
     1861 aatccggagt gggcgacgac ggacaacaag ttcgcctatt gcgaagcgca caacgcgaat
     1921 atccaggagg gcgagcggtt gaaacggatt cgcgataccg cggccgcgcg aagtctgatg
     1981 cgcgaacctg gcgacgaacc ggagcagccg cacaccgatc cgttgcgcga cgaagccgag
     2041 ttcatcaacc agagaggccg gcggaagaag gcgaggtagt aagcagtggg cggagcttcc
     2101 tcaaaattat ctgccgttcc cgccgggacg gatgaagagg gcggccaggc cgatcgcgat
     2161 gagaagcacg aggacgatga gcagcaggcc gaggacggga ttcgattcca tttatccggc
     2221 cggcgacgcg cgccgctcca cgcgcaaccg gggcacgaaa cgatcattct ggaaatcgta
     2281 ggtctccgga tagccctcga tccccatcgc ggccgcgcac atcttcagaa actcttccgc
     2341 ttcgacgcgc gcctgatcgg cgaccatctt cccttgctgc gccatctgct caccttgctg
     2401 gacggcggct ccgagcttct ggatgatgcc gagccgttcg gcggatagct tcatgtctgg
     2461 cattcgtcct ccctttaagc ccacacgatg ggataggtcg tcgagacgat cacctggagc
     2521 tgggcatcgg tcgtggcatt cggatcgctg ccgttggatt gcgtctgcgg gtcggtgacc
     2581 acgtaccaca tgaatttatt cgattcgttc accggatcgg caatcgcgcg tttggcattc
     2641 gctttcatgg cgtcgcccgg tggaggcgat ccgccgccgg ccaggacaaa ctgcgccgcg
     2701 cgcgcgatct cgacggcggt gcgctgaatc aggctggcat cgtagcgaag ctgggatgtt
     2761 tgaacgttgg tcattgccat aacaattgat cctccattac ggttctgtcg cgatcacctg
     2821 gaccgcgccg gtgttaaagc ggacgacgag ttgggttttg ccggcgccgt tgtcccgggc
     2881 atagaaccgg gcggtgttgg cagccccggc cgcggggtcg gccatttcgg tgaattgact
     2941 gtagccggaa ttatcgatgt taccgaagta gccaacccgc atgcgcgcgt ttggagcacc
     3001 aagatcataa ttgttattgt tgataggatg caggtgacca ctggagcgga taaagtaacc
     3061 attcgtactg tttccaataa agagatcttg aagcgtgccg ctacctgcgc cttgatattg
     3121 aatccacgct ccagtagtag aggcagtca
//
LOCUS       DATDHO010000502         5153 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_466174, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000502 DATDHO010000000
VERSION     DATDHO010000502.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5153)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5153)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5153
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466174"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(327..2723)
                     /gene="clpA"
                     /locus_tag="VIY07_09575"
     CDS             complement(327..2723)
                     /gene="clpA"
                     /locus_tag="VIY07_09575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HEY6382040.1"
                     /translation="MPTFSRSLEQSLHRALAIANERHHEYATLEHLLLALIDDQDASA
                     VMRACNVDLDKLRRSLTAYLESELENLITDGAEDSKPTAGFQRVIQRAVIHVQSSGRE
                     EVTGANVLVAIFAERESHAAYFLQEQDMTRYDAVNYISHGIAKRPGLSESRPVRGVEE
                     EADAKGSDEPKKKGDALEAYCINLNKKAKDGKIDPLIGRDSEINRTIQVLCRRQKNNP
                     LFVGDAGVGKTAIAEGLARRIVHGEVPDVLKGATVFALDMGTLLAGTRYRGDFEERLK
                     QVIKEIEAYPGAIMFIDEIHTVIGAGATSGGAMDASNLLKPALASGTIRCIGSTTYKE
                     YRQYFEKDRALVRRFQKIDVNEPSVLDAIEILKGLKPYFENYHKLKYTNEAIKAAVEL
                     SSRYIHDRKLPDKAIDVIDESGAAQMLLPESRRKKTIGLKEIETTISTMARIPPKTVS
                     KDDAEVLQHLEHTLKTVVYGQDRAIESLSASIKLARAGLREPEKPIGCYLFSGPTGVG
                     KTEVAKQLAISLGVELIRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDGVDQHPH
                     CVLLLDEIEKAHPDLFNVLLQVMDHGKLTDHNGKQVDFRNVILIMTTNAGASDLARQA
                     YGFTRSKREGDDQEAINKMFAPEFRNRLDATITFAHLSQEIIAKVVEKFVLQLEAQLG
                     DRNVTIELSEEASRWLIANGYDELMGARPMARVIQEHIKKPLADEVLFGHLKRGGHVR
                     VIVDKDEEGRDKLGFQFLEGPVTPKPEKLPVVRPKKRRASPRPKPKRGSVPKVPLAKV
                     "
     gene            complement(2761..3096)
                     /gene="clpS"
                     /locus_tag="VIY07_09580"
     CDS             complement(2761..3096)
                     /gene="clpS"
                     /locus_tag="VIY07_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEY6382041.1"
                     /translation="MADDDRKRRNEQGGPGTGVITKTKPQTKRPNMYRVLILNDDYTP
                     MEFVVHVLERFFGKDHEAATRIMLHVHHHGIGECGIYTYEVAETKVTQVMDFARKHQH
                     PLQCVMEKK"
     gene            3488..4762
                     /locus_tag="VIY07_09585"
     CDS             3488..4762
                     /locus_tag="VIY07_09585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY6382042.1"
                     /translation="MLARFLTNTRGGVVPLMAVVAVPLMASVGIAVDYSRINAARTAF
                     QVALDATALMMSKNAATETDAQRQTEATNTFNSLFSRPEVTDIAISPNFTSTGGSKLT
                     LNGTAVVHTNFLGIIGVSQVEISALSVSTWGNTRLRVALALDNTGSMASDGKMDALKT
                     ASHNLLTQLKNAAVHAEDVYVSIVPFSKDVNFGPDNYAESWLRWDLWDAVNGTCSSTK
                     YHKQSSCVSNGKIWTPAAHSTCNGCVTDRDQNYDTKNDAPVSGATLYPAEQYSSCSAP
                     LIGLTNDWTKLNEKIDAMTPVGNTNQAIGLQVGWQSLTAAPFTIPAIDTDYKYQTVII
                     LLTDGLNTEDRWYTSQSSINARQQKTCDNIKAAGITLYTVQVNTGGDPVSTLLQNCAS
                     DGGKFFHLTTAGQIVSTFGQIGTSLSKLRLAM"
BASE COUNT         1006 a         1598 c         1441 g         1108 t
ORIGIN      
        1 caagggaacc gtatgataca tatgcggtaa cacccacagc gcggtgcaca ggtgttgacc
       61 agcccatagg cagcgcgcag gagcctgcca tggggcctcg ctttgtgcgg agccagtggg
      121 gccaacgagt aatccgccat ccattttctg tcatcgccaa acgaatcgcg ggttacgcct
      181 tcggctaacc cgcactcaaa gcctcgtcga attcactccc tcgcttccac atcacccgcc
      241 taatcctgcc gcacgcatgc ggcatccgcg aggaaatgcc aaggccgggc agaacgcccg
      301 gcctcgctct taatccacgg cacagttcag acctttgcca gcggcacctt cggcaccgag
      361 ccgcgctttg gcttgggacg cggcgatgcg cgccgcttct tcgggcggac taccggcaac
      421 ttctccggct tcggcgtgac gggtccctcc aggaactgga agccaagctt gtcgcgcccc
      481 tcctcgtcct tgtcgacgat cacgcgcacg tggcctccgc gcttcagatg cccgaacagc
      541 acctcgtccg cgagcggctt cttgatatgc tcctggatca cgcgggccat cggccgggca
      601 cccatcagct cgtcgtatcc gttggcgatg agccagcggc tcgcctcttc ggaaagctcg
      661 atggttacgt tgcggtcgcc cagctgcgcc tcgagctgga gcacgaattt ctccacgacc
      721 tttgcgataa tctcctgcga caggtgggcg aaagtaatgg tcgcgtcgag ccggttacgg
      781 aactcgggcg cgaacatctt gttgatcgct tcctggtcgt cgccttcccg cttgctgcgc
      841 gtgaagccgt aggcctgccg cgcaagatcg gacgctcccg cattcgttgt cataatcagg
      901 attacgttgc ggaaatcgac ctgcttgccg ttgtggtcag tgagcttgcc gtgatccatc
      961 acctgcaaca gcacgttgaa cagatccggg tgcgctttct cgatttcgtc gagcagcagg
     1021 acgcaatgcg gatgctgatc gacgccatcg gtcaggagcc cgccttgatc gaagccgacg
     1081 tagccgggag gcgcgccaat cagccgcgaa accgtgtgcc gctccatgta ttccgacatg
     1141 tcaaagcgga taagctcgac accgaggctg atagcgagct gcttcgccac ttcggtcttg
     1201 ccgacgccgg tcggtccgga aaacagatag cagccgatcg gcttttccgg ctcgcgcaag
     1261 cccgcgcgcg cgagcttgat cgatgcggag agcgattcaa tcgccctgtc ctgaccgtag
     1321 acgaccgtct tcaaggtgtg ctcgagatgc tggagcacct cggcatcatc cttggacacc
     1381 gtcttcggcg gaattcgcgc catggtcgag atcgtcgtct cgatctcctt aaggccgatt
     1441 gtcttcttgc gccggctctc cggaagcagc atctgcgctg cgcccgactc atcaatcaca
     1501 tcgattgcct tgtcaggcag cttgcgatcg tggatgtatc gcgacgatag ctcgacggcg
     1561 gccttgatgg cctcgttcgt gtacttgagc ttgtgatagt tctcgaaata gggcttgagg
     1621 cctttcagga tctcgatcgc atcgaggacc gacggctcgt tgacgtcgat cttctggaac
     1681 ctgcgcacca gtgcgcggtc cttctcgaaa tactgtctgt attccttgta ggtcgtcgag
     1741 ccgatgcaac ggatcgtgcc cgaggcaagg gcaggcttca gcaaattcga agcgtccata
     1801 gcgccgccgg acgtggcgcc ggcgccgatg accgtatgga tctcatcgat gaacatgatc
     1861 gcgcccggat aggcctcgat ctccttgatc acctgcttga gacgttcttc gaaatcgcct
     1921 cggtaacgcg tgccggcaag cagcgtgccc atgtcgagcg cgaaaacggt tgcgcccttg
     1981 agcacgtccg gcacttcgcc atgaacaatt cgccgggcaa ggccttccgc tatcgcggtc
     2041 ttgccgacgc cggcatcgcc gacaaacaac ggattgttct tctgccttcg gcaaagcacc
     2101 tggatggtgc ggttgatttc ggagtcgcga ccgatcaacg gatcgatctt gccgtccttg
     2161 gccttcttgt tcaggttgat gcagtaggct tcgagcgcgt cgcccttttt cttgggctcg
     2221 tcgctgcctt tcgcgtcggc ttcttcctcg acgccccgca ccgggcggga ctccgacaga
     2281 cctggccgct tcgcaatgcc gtgactaatg tagttgaccg catcgtagcg ggtcatgtcc
     2341 tgctcttgca ggaaataggc cgcatgactt tcgcgctctg cgaagatcgc caccagcacg
     2401 ttagcgccgg tcacctcctc gcgtccggag gactgcacat gaatgactgc gcgttggatc
     2461 acacgctgaa atccggccgt gggttttgag tcctccgcac catcggtaat caggttttcg
     2521 agttccgatt caagatacgc agtgaggctt cgccggagct tgtcgagatc cacgttgcaa
     2581 gcgcgcatga ccgcggaggc atcctgatcg tcgatcaggg cgagcagcag gtgctcaagc
     2641 gttgcgtact cgtgatgccg ctcgtttgcg attgcaagcg cgcgatgtaa cgattgttca
     2701 aggctgcggg agaacgtcgg catcaaattt tccagttcat gtccattcgt gtttcacgac
     2761 tcacttcttc tccatcacgc attgcaaagg atgctgatgt ttgcgcgcaa agtccatcac
     2821 ctgcgtgacc ttggtttccg caacctcgta cgtgtagatg ccgcattcgc ctattccgtg
     2881 gtgatgcaca tgcaacataa ttcttgtggc ggcttcatgg tccttgccga agaaccgctc
     2941 cagcacgtgc acgacgaact ccatgggagt gtagtcgtcg ttgagaataa ggacgcggta
     3001 catgttcggc cgcttggttt gcggcttggt cttggtaatg accccggtgc ccggcccgcc
     3061 ctgctcgttg cggcgcttgc ggtcatcgtc cgccattgag ggcgcagaac cgcgcgacat
     3121 ggccgtgtga gttggaggat atttgctggc tgggaacgtc atggtttggc cgaggcagta
     3181 aagatcctgg ggtttgcagc gtggccgcga cggcgcgtgg ccaagcacca tcatagtgac
     3241 ccgggcacag ctattccaac tcggcaattc gcttgaggct gccccgttcc gggacaattc
     3301 gcgattcttg cgcgattttc tgcggtgaaa cgcagataat tattgcttaa gcgatcgcaa
     3361 cccgtttgcg ggcaaattga ggcgactttc ccccaaattc acggccttcc tctcacggtt
     3421 tttcaagggg ggtaccccca tatggaggaa ctttggaagg tttgtgtcca caacattggg
     3481 tgaagccatg ttagcccgtt ttctgaccaa cacccggggc ggtgttgtcc cgctgatggc
     3541 ggtcgttgcc gtcccactca tggcctcggt tggcatcgcc gtcgactact cgcgaatcaa
     3601 tgcggcccga acggcattcc aggttgctct cgacgcaacc gcgctgatga tgtcaaaaaa
     3661 cgcggcgacg gaaaccgacg cccaacgtca gaccgaggct acgaacactt ttaattcgct
     3721 gttcagccgg cccgaggtca ccgacatcgc catctcgccg aatttcacct ccaccggcgg
     3781 atcgaagctg accctcaacg gcaccgcggt cgtccacacc aattttctcg gcataatcgg
     3841 cgtcagccag gtcgagatca gtgccttgtc ggtttcgacg tggggcaata cgcgccttcg
     3901 tgtcgccctt gcgctcgaca acacaggctc tatggccagt gacggcaaaa tggatgctct
     3961 caagaccgca tctcacaatc tgctgaccca gctgaaaaac gccgccgttc atgctgaaga
     4021 cgtttatgtc tcgattgtcc cgttcagcaa ggacgtgaac ttcggcccgg ataactatgc
     4081 cgaaagctgg ctgcgatggg acttgtggga cgcggtcaac gggacctgca gcagcacgaa
     4141 atatcacaag caaagcagct gcgtttcgaa tggcaagatc tggaccccgg ccgcccacag
     4201 cacctgcaat ggctgcgtga cggaccgcga ccagaactac gacaccaaga acgatgcacc
     4261 tgtgtcaggc gccacgttgt atcccgccga acagtactct tcgtgctcgg ctcccctgat
     4321 cggcctgacc aacgattgga ccaagctgaa cgaaaaaatc gatgccatga ccccggttgg
     4381 caacaccaac caggcgatcg ggctgcaggt cggctggcag agcctgacag ccgccccctt
     4441 cacgatcccg gcgatcgaca cagactacaa gtatcagacg gtcattatcc tgctgaccga
     4501 cggtctcaac acagaggacc gctggtacac gagccagtca tcgatcaacg cgcggcaaca
     4561 gaagacctgc gacaacatca aggccgccgg aattactctc tacacggtgc aggttaacac
     4621 cggtggcgac cctgtctcga cgctgctgca gaattgcgcc agcgatggcg gaaagttctt
     4681 ccaccttacg accgcagggc agatcgtctc caccttcggt cagatcggca cgtcgctctc
     4741 caagctgcgc ctggcgatgt aatgcgcccc ctcccgcggc gttgcggatg gctactcaca
     4801 cggccatccg cgcgccgcgg tcttttcctg ccgatttccg cgatcgcacc aaccgagtgt
     4861 taacgacggc tcagaacaat gttcggcatt tgcgcgatct ggggcaaaca acgtttacca
     4921 accaagccgt tgaaaaaagt cgaacaaagt caaaaaggca accgcaaatc ttaccgtcag
     4981 cgccgaattc agtccctgct catatacctg ccctttagta ccgaccttta ttacggcaga
     5041 cggattcaac catttcttgg tgcgtcgtca tgatgatcgc ctggaagaag ttttgccgcg
     5101 tgttgtctgc ttttaaggcc gaccgccgag ccaacgtcgc catcaccttc gcc
//
LOCUS       DATDHO010000503         2256 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_222168, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000503 DATDHO010000000
VERSION     DATDHO010000503.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222168"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            305..1816
                     /locus_tag="VIY07_09590"
     CDS             305..1816
                     /locus_tag="VIY07_09590"
                     /inference="COORDINATES: protein motif:HMM:NF018597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HEY6382043.1"
                     /translation="MHTKSRFSRWLKAAAVLAVAECAGVAVVQAQSSGDFFRFDGSHV
                     RYDKYRRNLFDPLGWERQRRKVHRRSDTSRASPRVKAKSKPEQSEPAISKKAVGTAGT
                     TIEDVPLPRPRPPFWPEPRSFAEAAGPGFDSASVTSALSDCDQRLGEIAAIELLPRLI
                     GPGECGGRDMIRLNAVLLPDRKRVEVRPTAVLRCAMAESFVAWVRDEASGHVAALGDG
                     LRSVDTLGSYDCRGRNSAADAKLSEHGKGNAIDVRALVLAGGRHIDLTDETVSKSVRD
                     NLRASACHRFTTVLGPGADSYHSNHIHLDILERHRGARICQWDVREPPPPPKVARGRV
                     RLAARSVSGRPDNQTVTAGPWSIAPTYKANKLQSCSMSRSDGDLGATFVRAQDGLSVI
                     LESPKWKLERGKTYPVRLAAGSRSVDAKARAETKSVVIPLADSRLNSRLRSANNLQVR
                     AEGATLRVPLDNSSTAFERLEECFNSGEAPKANPSVKRNGSESNPFVTPRRTR"
     gene            complement(1820..>2256)
                     /locus_tag="VIY07_09595"
     CDS             complement(1820..>2256)
                     /locus_tag="VIY07_09595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382044.1"
                     /translation="DFLMAQPNWSAADSALLVNLGEALADVERGHTTPWLSSKPPHRP
                     PTPVNIRRRQAQAAEHMEQLLRRGLSREEAAKKVFREIPRDSLLFGKKENASWRTVAQ
                     WLDDVSASRRNSLERKSFEAALRQREFDFSDKGVKTIIARDC"
BASE COUNT          443 a          668 c          682 g          463 t
ORIGIN      
        1 tcatttggga cgctcgaagg tcgtccccca gccattttgt ttggataaag aaactgagtc
       61 caaaatacga ccacgctacc gaataccttc cgccccggcg attgttcggc taccccgcct
      121 agcccatgtc cggttgggtc atcagaagac ttgccctcaa gtctggccga ttcccgcttt
      181 gccgccagaa agcggaatgc tagggcaagc attgagggcg gcgttatggg acgcagcgcg
      241 cccgttgacg ttgcgcaatt cgggcaggaa cttttgctgt tgtgatgcac ttgagcattc
      301 acgcatgcat accaagagtc gattctcgcg ttggctcaag gcggcggccg ttctggcggt
      361 agccgaatgc gcaggcgtag ctgtcgttca ggcacaatcc tctggcgatt ttttccggtt
      421 cgacgggtcg catgtccgat atgacaaata tcgcagaaac ttgttcgacc cactggggtg
      481 ggagcggcag cgtcgaaaag tgcatcgacg cagcgacact tcgcgggcgt cgccgcgggt
      541 caaagcgaaa tcgaagcctg agcaaagcga gccagcgatc tcgaaaaagg ctgtcgggac
      601 tgcgggcacg acgatcgagg atgttccgtt gccgcgaccg cggccgccat tctggccgga
      661 acctcgctcc tttgccgaag cggcgggacc cggtttcgat tccgcgagtg tcaccagcgc
      721 attgagcgat tgcgatcagc ggctggggga aattgccgct atcgagttgc tgccgaggct
      781 catcggtcct ggcgaatgcg gcggtcgcga catgatcagg ctgaatgccg tattgcttcc
      841 cgaccgcaag cgtgtcgagg tcaggcctac ggcagttttg cgctgcgcga tggcagaatc
      901 ctttgttgcc tgggtccggg acgaggcttc cggtcacgtc gcggcgcttg gggacgggct
      961 gcgctccgtt gataccttgg gttcgtacga ctgccgcggc cgtaacagcg ctgccgacgc
     1021 caaactcagc gaacatggca aaggcaatgc tatcgatgtt cgtgccctgg tcctggcggg
     1081 cgggcgccac atcgacctca ccgatgagac cgtttcaaaa tcggttcgcg acaatttgcg
     1141 tgcttccgcc tgtcaccgct tcacgacggt gctgggaccc ggcgctgaca gctatcacag
     1201 caaccatatc catctcgata ttctcgagcg acacaggggt gcccgtattt gccaatggga
     1261 tgtgcgcgag ccgcctccgc cgcctaaagt cgcgcgcggg cgtgttcggc tggccgccag
     1321 gtccgtgtcc ggacggccgg ataaccagac ggtcaccgca ggcccttggt ccatcgcgcc
     1381 aacttataag gcaaacaagc tgcaaagctg cagcatgagc cgttccgacg gggaccttgg
     1441 agcaacgttc gtgcgcgctc aggacgggct gtcggttatc ctcgagtcgc cgaagtggaa
     1501 gcttgagcgg ggcaagactt atcctgttcg tctcgcggca ggctcgcgct ccgtggatgc
     1561 caaggcccgt gcagaaacga agagcgtggt tatcccgctt gcagacagca ggctcaattc
     1621 gaggcttcga tcggcgaata accttcaagt gcgcgccgag ggcgccacgc tgcgggtgcc
     1681 gcttgataac agttcgacgg cattcgaacg tcttgaggaa tgcttcaaca gtggcgaagc
     1741 gccgaaagca aacccctccg tgaaacgcaa cggatcggag agcaatccat tcgtcacacc
     1801 tcgcaggacg cgctaagact cagcaatccc gggcaatgat tgttttcacg cctttatcgg
     1861 aaaaatcaaa ctctctttgc ctgagcgccg cctcgaaact cttgcgttca agactgtttc
     1921 ggcgactggc acttacgtca tcgagccact gagccacggt tctccacgaa gcgttttctt
     1981 tctttccgaa aagcaagctg tcacgcggga tttcacgaaa cacttttttc gctgcctcct
     2041 cacggctcag gccgcggcgc agcaattgct ccatgtgttc cgccgcttgt gcctggcgac
     2101 gcctgatatt gaccggagta ggcgggcgat gtggtggctt gcttgaaagc cagggcgtgg
     2161 tgtggcccct ctcaacgtcg gcaagggctt cccctaagtt cacgagcagc gcggaatcgg
     2221 cagcggacca attgggctgc gccatcaaaa aatcga
//
LOCUS       DATDHO010000504         8145 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_23791, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000504 DATDHO010000000
VERSION     DATDHO010000504.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8145
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_23791"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            55..1671
                     /locus_tag="VIY07_09600"
     CDS             55..1671
                     /locus_tag="VIY07_09600"
                     /EC_number="1.3.8.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HEY6382045.1"
                     /translation="MFEVQNQPPPLESYNLFATDAVLRDAVRREGASWAESELTALGE
                     TLGKPETIQLGYDANRFAPQLRTFDRYGHRLDEVEFHPAWHELLGLALRSGLHSSPWA
                     DPKSGAHVARAAGTYMLGQVESGVYCPVAMTYGSVPTLRHAPGIAAEWLPRIFSRNYD
                     RSFRPAKLKSAALVGMGMTENQGGSDLRTNTTRAEPAGDGSYRLYGHKWFMSAPMCDA
                     FLVLAQSAKGLSCFLMPRWTPEEERNAIRIVRLKDKLGNRSNASSEVEFHGAYAQLIG
                     EEGRGIPTIIEMGNYTRLDCCIGSSGLMRQAVAQAIHHARHRTAFQKKLIDQPLMTNV
                     LADLALESEGATVLTMRLARAYDESDDAAQVIRRVITPAAKFWICKRTPFLTYEAMEV
                     LGGSGYIEESIMPRLYREAPVNSIWEGSGNIMCLDVLRAMEKTPNAVEVLRRELGDGK
                     EARLKAFSEQLEKRLLGIRERHDESQARALTRELVLALQAALLIKHAPPPVADAFCAS
                     RLGAGGGSTFGLLPRGLDLRAIAERAAPVN"
     gene            complement(1668..2066)
                     /locus_tag="VIY07_09605"
     CDS             complement(1668..2066)
                     /locus_tag="VIY07_09605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEY6382046.1"
                     /translation="MTKELLWLTLTIILTGVMWVPYMIDRAMVRGFWACMDNPSRSDK
                     PQSPWAQRLYFAHTNAVENLIIFAPLVLILDAQGHSTRSTIIACAVYFWSRLAHAIFY
                     ALGIPVLRTLAFTVGFLAQAALVLAVFGKL"
     gene            complement(2149..3960)
                     /gene="phaC"
                     /locus_tag="VIY07_09610"
     CDS             complement(2149..3960)
                     /gene="phaC"
                     /locus_tag="VIY07_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HEY6382047.1"
                     /translation="MDKPTTDLNKLGNVDIEALSRNIARLIEEGGKALAAYLKPREEG
                     KIKTELGEDITDAIKSLGRVAEYWLSDPQRAFDLQTSLGRAYLDLWAGAVKRMAGDQS
                     EPVAAPDLNDKRFADPEWSQNQFFDFLKQAYLLTVQWGDRLVRDAAGVDENTRKKAEF
                     YVRQIANAISPSNFVLTNPELLRETLSSNAENLVRGMHMLSEDIKEGEGTLKIRQSDP
                     STFEVGRNLAVTPGKVVFQNDLVQLIQYEATTKQVMKTPLLVVPPWINKFYVLDLTPE
                     KSFIKWCVDQGITVFVLSWVNPDARLAQKSFEQYMREGVIEALDKIELATGEKQVNAV
                     GYCVGGTLLSITLAYLAAKKKKRVKSATLFAAQVDFRNAGDLMVFVDEERIQQLETHM
                     KQQGYLEASRMATTFNMLRSNDLIWPYVVNNYMRGKKPLPFDILYWNSDATRMPATNH
                     SYYLRNCYLDNKLSKGEMEIGGVTLDLHKVTVPIYNLATREDHIAPAKSVLYGSQFFG
                     GPVKYVLAGSGHIAGVINPPSKPKYQYWTGEKPSGSDIESWLKTATEHPGSWWPDWLE
                     WLKAQDKKLVPARKIGGGKLKPTEAAPGSYVKVKSWT"
     gene            4158..4517
                     /locus_tag="VIY07_09615"
     CDS             4158..4517
                     /locus_tag="VIY07_09615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382048.1"
                     /translation="MRRGFERILRVAGLSLVAALGGCSAGPIIDRLPGDLGLPAGAPA
                     RPKKPLEYPAVHDMPPARSSAPMTEEEQVKAEKELTALRDRQEGRSPASKKAGAAAKK
                     PPTAVQNGQTTGAKPNP"
     gene            4578..5795
                     /locus_tag="VIY07_09620"
     CDS             4578..5795
                     /locus_tag="VIY07_09620"
                     /EC_number="2.6.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HEY6382049.1"
                     /translation="MEEFYRILRLPPYVFEEVNKAKAKARNAGADIIDLGMGNPDMPA
                     PPHVIEKLKETLGKPRTDRYSASRGIPGLRRAQAAYYDRRFGVKLNPENQVVTTLGSK
                     EGFANVAQAITAPGDVVLVPNPSYPIHAFGFLMAGGAIRSVPSEPTPNFFHTLERAIV
                     HSIPKPRAVVVCYPANPTAYVATLDFYKDLIAFAKKHDILVLSDLAYAEVYFDGNPPP
                     SLLQVPGANDIAVEFTSMSKTFSMPGWRIGFAVGNERIIAALGRVKSYLDYGAFTPVQ
                     VAATAALNGPDDCIREMRETYRRRRDVLVESFNRAGWHVPSPRASMFAWAPIPEPFKG
                     LGSVEFSKLLVEKAEIAVSPGIGFGEYGEGFVRIALVENEQRIRQAARNVRRFLENAP
                     EQLHNVVPLATRR"
     gene            5892..7208
                     /locus_tag="VIY07_09625"
     CDS             5892..7208
                     /locus_tag="VIY07_09625"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEY6382050.1"
                     /translation="MPNQSLKVGVAGLGTVGTALVSQVAHQRDALAARCGRPIEIVAV
                     CARSRGKDRGIDLRKMKWFGDPQALAREPGIDVFVELIGGGGEPARGAVETALSSGKS
                     VVTANKALLARHGVKLAAMAESKHVALNFEAAVGGAIPIVKTLREGMAGNSFDRIYGI
                     LNGTCNYILTRMEQEKMTFAECLKEAQRLGYAEADPGFDIEGHDTAQKLAILASLAFG
                     NKVDQTAIYVEGISSITPADLSAADELGYRVKLLGVAVKTPKGIEQRVHPTMVRKDSA
                     IAQVMGVTNAVTVDATDINPLTLVGPGAGGAATASAVLADIGDIARGIRTAPFGRPTA
                     RLGDVRKAPMQRHEGGYYIRLVARDKPGTAATIAKRLAEQQISIESIVQRHDPAHLGR
                     DTKAGSVPVILITYATTEDAVRKALAAVGRDRVISGRPQVIRIEKN"
     gene            7252..7746
                     /locus_tag="VIY07_09630"
                     /pseudo
     CDS             7252..7746
                     /locus_tag="VIY07_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314906.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphatase class II"
     gene            7862..>8145
                     /locus_tag="VIY07_09635"
     CDS             7862..>8145
                     /locus_tag="VIY07_09635"
                     /inference="COORDINATES: protein motif:HMM:NF012402.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382051.1"
                     /translation="MIKYATDKQLPLKIIIFDSNSDRNNILFKQEFDDWANINKNLKI
                     IYTISEENQSGQASSLSTADNWKGEYGRIDKAMILKYLDTEALKNSIFYI"
BASE COUNT         1696 a         2344 c         2437 g         1668 t
ORIGIN      
        1 tggattccgg gttcgctcac tggcgttcgc actctccgga atgacgaggg agccatgttc
       61 gaggtccaga atcagccacc cccgctcgag tcatacaatc tgtttgcgac cgacgccgtg
      121 cttcgcgacg cagttcggcg agaaggcgcg agctgggcgg aaagcgagct cactgcgctg
      181 ggcgagacgc tcggcaagcc cgagacgatc cagcttggct acgatgcaaa caggttcgca
      241 ccgcaactgc ggacctttga ccgttatggt caccggctgg acgaagtcga attccatccc
      301 gcgtggcatg agttgctcgg gctcgcgttg agatccggcc tccattctag tccatgggcg
      361 gatccgaaat ccggcgccca cgtcgcgcgg gccgcgggca cctacatgct cggtcaagtc
      421 gaaagcggcg tgtattgccc ggtcgcgatg acttacggct ccgtgccgac cttgcggcac
      481 gccccgggga ttgccgccga atggctgccc cgcatctttt cgcgcaacta cgatcgcagc
      541 ttccgtccgg caaaactgaa aagcgcggcg ctcgtcggca tgggcatgac ggagaaccag
      601 ggtggctcgg acttgcgcac caatacgacg cgcgcggagc ctgcgggaga cggcagctac
      661 cgcctctatg gccataaatg gttcatgtcg gcgccgatgt gcgacgcctt cctggtcctt
      721 gcgcaatccg cgaaaggatt gagctgcttt ctgatgccgc ggtggacgcc ggaggaggaa
      781 cgcaacgcca ttcggattgt gcgtctgaag gacaaacttg gcaatcgctc aaacgcttcc
      841 agcgaagtgg aatttcatgg cgcgtatgcg caactcatcg gggaagaggg gcgcggtatt
      901 ccgaccatca tcgagatggg aaattatacg cggcttgatt gttgcatcgg ctcgtcggga
      961 ctgatgcggc aggcggtcgc gcaggctatc catcacgccc ggcatcgaac ggcattccag
     1021 aaaaagttga tcgatcagcc gctgatgacg aatgtgttgg ccgatctggc gctggaatcc
     1081 gaaggcgcaa ctgtcctcac catgcggctc gcccgtgctt atgacgagag cgatgacgcg
     1141 gcgcaagtga tccgacgcgt gatcacgccg gcggcaaagt tctggatttg caagcggacg
     1201 ccatttctga cctacgaggc gatggaggtg ctgggaggat ccggctatat cgaggagagc
     1261 atcatgccgc ggctctatcg cgaggcaccc gtcaactcga tctgggaagg gtccggcaac
     1321 atcatgtgcc tcgatgtgct gcgcgcgatg gaaaaaactc cgaatgccgt cgaggtgctg
     1381 cggcgcgagt tgggggacgg caaggaggcg cggctaaaag ctttttccga gcaactggaa
     1441 aagcggctgc ttggcattcg ggaacgtcac gatgagtccc aggcgcgcgc gctcacgcgc
     1501 gaactggtgc tggcgcttca ggctgcgctg ctgatcaagc acgcgccgcc cccggtcgcc
     1561 gatgcgtttt gcgcttcgcg actcggcgca ggaggcggct caactttcgg actgcttccg
     1621 cgcgggcttg atttgcgggc gatcgctgaa cgggctgcgc ccgtgaacta gagctttccg
     1681 aacaccgcca aaacaagcgc tgcctgcgcg aggaacccaa cggtgaatgc gagcgtgcgc
     1741 agaacgggga tgcccagcgc atagaagata gcgtgggcga gacgcgacca gaaatagact
     1801 gcgcaggcga tgatcgtgct tcgagtggaa tggccctgcg catccagaat aagcaccagt
     1861 ggtgcaaaaa tgatgagatt ttccactgca ttggtgtgcg cgaaatacag ccgctgcgcc
     1921 cacggcgatt gcggcttgtc gctccgtgac ggattgtcca tgcaggccca aaaaccgcgc
     1981 accatggcgc gatcgatcat gtaaggcacc cacatcacgc cggtcaggat gatcgtcagc
     2041 gtcagccaca acagttcctt ggtcatcgcc gctccccgtc gtgatgattt tcagtcggag
     2101 cataattgaa gccgtggccg ctgtcctgtc cgcgacgcat ctattcgatc acgtccagct
     2161 tttaactttc acataggagc cgggtgctgc ttccgttggc ttgagcttgc cgccgcctat
     2221 ctttcgcgcc gggaccaact ttttatcttg tgccttgagc cactccagcc aatcgggcca
     2281 ccacgagcca ggatgctcgg ttgccgtttt gagccagctt tcaatgtccg agccgctggg
     2341 cttttcaccc gtccaatact ggtactttgg cttgctgggc gggttgatca ctccagcgat
     2401 atggcccgac cctgcaagca catattttac cggcccgccg aaaaactgcg aaccgtacag
     2461 caccgatttc gcaggcgcga tgtggtcttc gcgcgtggca agattgtaga tcggcacagt
     2521 caccttgtgc agatcgaggg taacgcctcc aatttccatc tcgcccttgg acagcttgtt
     2581 gtcgagatag cagttgcgca aatagtacga atgatttgtc gccggcatgc gggtggcatc
     2641 cgagttccag taaaggatgt cgaatggcag cggcttcttg ccacgcatgt agttattgac
     2701 gacatagggc cagatcaggt cgttcgagcg cagcatattg aacgtggtcg ccatgcgcga
     2761 cgcttccagg tagccctgtt gtttcatgtg cgtctcgagc tgctggatgc gctcctcgtc
     2821 gacgaacacc atcagatcgc cggcattgcg gaaatcgacc tgcgctgcga acaacgtcgc
     2881 cgacttgacg cgcttctttt tcttggcagc caggtaggcg agggtgatcg aaagtaacgt
     2941 gccgcctacg caatatccga cggcgttcac ctgtttctcg cccgttgcca gctcgatctt
     3001 gtccagggcc tcgatcacgc cttcgcgcat gtattgttca aagctttttt gcgcgagcct
     3061 ggcgtctgga ttgacccacg acaacacgaa aaccgtgatc ccctgatcga cgcaccattt
     3121 gatgaacgat ttttccggcg tgaggtcgag aacgtagaat ttgttgatcc atggcgggac
     3181 aaccaacaga ggggttttca ttacctgctt tgtggtcgct tcgtactgga tcaactgcac
     3241 cagatcgttt tggaaaacga ctttgccggg agtgaccgcg aggttgcgtc ccacctcgaa
     3301 cgtggatgga tcggattgac ggatcttgag ggtgccttca ccttccttga tgtcttccga
     3361 gagcatatgc atgccgcgca cgagattttc ggcattcgat gacagcgtct cacgcaacag
     3421 ctcgggattc gtcagcacaa aattcgaagg tgagatcgcg ttcgcaatct gcctgacgta
     3481 gaactcggct tttttgcgcg tgttctcgtc aacgccagct gcgtccctaa ccagccggtc
     3541 gccccactgc acggtgagca ggtaagcttg cttgagaaaa tcgaaaaact gattctgcga
     3601 ccactcggga tcggcaaacc gcttgtcgtt taaatcgggg gcggcaaccg gttctgactg
     3661 gtcacccgcc atgcgcttga cggcgccggc ccagagatcg aggtaggcgc gaccaaggct
     3721 ggtctgcagg tcgaatgcgc gctgaggatc cgacagccag tattccgcca cccggcctag
     3781 cgacttgatc gcatcggtga tgtcctcgcc gagttcagtt ttgatcttgc cttcttcgcg
     3841 cggcttcaaa tacgcggcga gagccttgcc accttcctcg atcaggcgcg caatattgcg
     3901 cgataacgcc tcaatatcga cgttgccgag cttgttgagg tctgtggttg gcttgtccat
     3961 cggcttcgct cagtctttcg acagaagtgt ctggaccgct gacgtcgcgc aagctgcatt
     4021 tcaacacatg gtttcgccgc gcttgcggta actcgcgggt taccttgctg tggccatatt
     4081 agcccgctaa cagggctctg atataatcca ttgagtccac atcggtttcc ggatcagcgg
     4141 cacatcttgc ggtgcacatg agacgtgggt ttgagcgaat tctgcgggtt gcaggtttga
     4201 gcctggttgc ggcacttggg ggttgttccg cgggcccaat cattgaccgc ctgcccgggg
     4261 acctggggct gcccgccggg gctccggcgc gtccaaaaaa gcccctcgaa tacccggccg
     4321 tgcatgacat gccgccggcc cggtcgtcgg caccgatgac cgaagaagag caggtcaagg
     4381 ccgaaaagga actgactgcc ttgcgagacc ggcaggaagg acgttcgcca gccagcaaga
     4441 aggccggcgc ggcggctaaa aagccgccaa ctgccgtcca aaacgggcag accactggcg
     4501 cgaagccgaa cccgtgataa aagccagccg gggtacccgc gggctggaag ggcagccgac
     4561 ctttaaggtt tgagccgatg gaagaatttt accgcattct tcgtttgcct ccctatgtgt
     4621 tcgaggaagt gaacaaggca aaggcgaagg cccgcaatgc cggggcggat atcattgacc
     4681 tcggcatggg caatccggac atgcccgcgc cgccgcatgt aatcgagaaa ctcaaggaga
     4741 ctctcggcaa gccgcgcacc gaccggtatt cagcttcgcg cggaattccc ggactgcgtc
     4801 gcgcgcaggc ggcctactac gatcgccgct tcggcgtgaa actcaatccc gagaaccagg
     4861 tcgtcactac gctcggctca aaggaaggtt ttgcgaatgt tgcccaggcc atcacggcgc
     4921 ccggcgacgt cgtgcttgtt ccgaacccta gctatcccat tcacgcgttc ggtttcctga
     4981 tggctggcgg cgctattcgc tcggtaccgt cggagccgac tccgaatttc ttccacacgc
     5041 tcgagcgggc gatcgtgcat tcgatcccca agcccagggc agtggtggtc tgttatccgg
     5101 ccaatcccac cgcctatgtt gcgacgctcg acttctacaa ggacctgatc gcctttgcga
     5161 aaaagcatga catcctcgtg ctgtccgacc tcgcctatgc ggaagtctat tttgacggaa
     5221 atcctccgcc ttcgctgctt caggttccag gtgcgaacga cattgcggtc gaattcacct
     5281 cgatgtcgaa aacattttca atgcccggat ggcgaattgg cttcgccgtg ggcaacgaac
     5341 gcatcattgc ggcgctcggc cgggtgaagt cctatctcga ctacggcgcg tttacgcctg
     5401 tgcaagtggc ggccacggcc gcgctcaacg gacccgatga ctgcatcagg gagatgcgcg
     5461 aaacgtaccg gcgcaggcgc gacgttctgg tcgagagctt taatcgtgcc ggttggcacg
     5521 taccttcgcc ccgcgcttcc atgttcgcct gggcgccgat ccctgaaccc ttcaagggtc
     5581 tcggcagcgt ggaattttcc aagctcctgg tggaaaaagc cgaaatcgcg gtgtcgcctg
     5641 gaatcggctt cggcgaatac ggcgaggggt ttgtgcgcat tgccttggtc gaaaacgagc
     5701 agcgcattcg ccaagccgcc cgcaatgtca gacgtttcct ggaaaatgcg ccggagcagc
     5761 tgcacaacgt cgttccgctc gcgacgcggc gctaactgcg agctccttta tggcttcagc
     5821 ccgggcgcat gatacccaag agcatgtcat cgacccctgt cggggatctg cacccgcttt
     5881 cggttgaaat catgcccaat caatcgctca aagtaggtgt cgccggtctg ggcactgtcg
     5941 gtaccgcact tgtttctcaa gttgcgcatc agcgcgacgc gttggctgca cgttgcggcc
     6001 gcccgattga aatcgtcgcg gtctgcgcac gctcacgcgg caaagatcgc ggtatcgacc
     6061 tcaggaaaat gaagtggttc ggcgatccgc aggcgctcgc ccgtgaaccc ggtatcgatg
     6121 tctttgtcga actgatcggc ggcggcgggg agccggccag aggcgcggtc gaaacggcgc
     6181 tctcgtctgg caagtccgtc gtgaccgcaa acaaggcctt gctcgccaga cacggcgtca
     6241 agctggcggc catggcggaa agcaagcacg tggcgctgaa tttcgaggcg gcagtgggcg
     6301 gcgccattcc gatcgtcaag acattgcggg aaggaatggc cggcaattcg ttcgatcgca
     6361 tctacggcat cctgaacggc acctgcaact acatcctgac gcggatggag caggaaaaaa
     6421 tgacattcgc cgaatgcttg aaggaagcgc agcggctcgg ttacgccgag gccgatcccg
     6481 gcttcgatat cgagggccac gatacggcgc agaagctcgc catcctggca agcctcgcat
     6541 tcggcaacaa ggttgaccaa accgcgatct acgtcgaggg catatcttcg atcacacctg
     6601 ccgatctttc cgccgccgat gagctggggt accgcgtgaa gctgctgggt gtggccgtca
     6661 aaacgccaaa aggcatagag cagcgcgtgc atccaaccat ggtgcgcaag gactctgcga
     6721 tcgcccaggt gatgggcgtg accaatgcgg tgacggtcga tgcgactgac atcaatccgc
     6781 tgacgctggt agggcccgga gctggggggg cggcaaccgc ctcggccgtc ttagctgata
     6841 ttggcgacat cgcgaggggc attcgcactg ctccgttcgg aaggccgacc gcgcggctgg
     6901 gggacgtgcg aaaggcgccg atgcaacggc atgaaggcgg ctattacatc cggctggtcg
     6961 cgcgcgacaa gccgggcacc gcagcgacca ttgccaaaag gcttgctgag cagcaaattt
     7021 caatcgaatc cattgtgcag cgccatgatc cggcacatct gggtcgagat accaaggcgg
     7081 gttccgtccc cgttattctc attacttatg caaccaccga ggatgccgtg cgtaaggctc
     7141 ttgcggcggt ggggcgcgat agggtgatct caggccggcc acaggtcata cgcattgaaa
     7201 agaactgagc gacctttcgg cgaggatcgc gtttctgagg ggagcgtcaa aatgccgagc
     7261 attaccgtcc agccggaatt tctgctggaa cgcattctca ccctcgaaat cgtgcgcgtc
     7321 accgagcgtg cggcggtatc ctcggcgcgt ttgcgtgggc atggcaagga caaggcatcc
     7381 gaccaggctg cggtcgacgc catgcgccgc gaactcaaca agctgcctat cgacggcacc
     7441 gtcgttattg gagagggcga gatcgacgaa gcgccgatgc tgttcattgg cgagaaagtc
     7501 ggcaccaagc atggcccgaa ggtcgacatc gccgtcgacc cgctggaggg cacgacgctt
     7561 tgcgccaaga acatgccagg ggcgattgcc accatcgcga tggccgatgc cggcacgcta
     7621 ctgcacgcgc cggattgcta catgcaaaag atcgcaatcg ggccgggtta tccgaagggt
     7681 accatcgatc tcgacgcgcc ggccgacgaa aacatcgtaa atctggcgcg agccaagggc
     7741 gtcaaggcag ggagcaaaag ttaaggttag aggtcccgag ggacaatttg taatacatga
     7801 ggattattca aaacctgctg tatttctttc tggggggata ggcgttactc catttagaac
     7861 tatgataaag tacgctactg acaagcagct gccattgaag ataataattt ttgattccaa
     7921 tagtgaccgt aacaacatct tgttcaaaca ggagtttgat gattgggcaa atataaataa
     7981 aaacttgaag attatctata ctattagtga agaaaatcaa tctggacaag catcatcatt
     8041 atctaccgca gataattgga aaggagagta tggaagaata gacaaagcaa tgattttgaa
     8101 gtacctagat actgaagcac tcaaaaattc aatattctat atttg
//
LOCUS       DATDHO010000505         4659 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_69835, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000505 DATDHO010000000
VERSION     DATDHO010000505.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4659
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_69835"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            209..442
                     /locus_tag="VIY07_09640"
     CDS             209..442
                     /locus_tag="VIY07_09640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382052.1"
                     /translation="MSKVAKLFREAAFDPEIVKTLCLAYDYAISRMHGTDQPNIVQEV
                     IAQRIISMARNGEDDLDRLCAGALKGLEFKSFD"
     gene            760..1443
                     /locus_tag="VIY07_09645"
     CDS             760..1443
                     /locus_tag="VIY07_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1614 domain-containing protein"
                     /protein_id="HEY6382053.1"
                     /translation="MAPGYFSALVVAFIVLLLLIQLGALRYAYMRLGVSSRTALILLF
                     GSLIGSYFNIPIAQLPQEHVVMGREIDFFGMRYAVPYVVQWPGTVLAVNVGGAVIPTI
                     MSAYLLFRYDLWGHAAIAIAVVAIACYALAEPIPGLGIAMPVLVPALVTCIVALILSR
                     IHAAQLAYIGGSLGTLIGADLFNLGKISGLGAPVASIGGAGTFDGIFLVAILAVLLAS
                     LTGPKAATT"
     gene            1490..3610
                     /locus_tag="VIY07_09650"
     CDS             1490..3610
                     /locus_tag="VIY07_09650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEY6382054.1"
                     /translation="MGNGKAKSSNKQSTAKTSSDAEPSARTSSGAKSRSPESKASPRR
                     RRNARAPDDSSKKLTDRKLKKSGKNSGTKSSKEAEPDVAESAKVEPPPPEIAEPDETM
                     SAEEIEQARKRYLLKRFWISARGFWGKSGDRIAWIATIGLFLLIVVNVAVQYGINVWN
                     REIFDAIEKRDSATVLWLSAVFFPLAFASVGLGVAEVFARMGIQRRWRAWLTDNVLSR
                     WLSNGRYYQLNLVAGDHKNPEYRIAEDLRIATDAPVDFVAGVTSALLSAATFIAVLWT
                     IGGALTVSVGGTTLTIPGFLVVAAIAYAAIASTAMAAIGRRFVAISESRNQAEAEYRY
                     VLTRVREHGESIALLGGEAEERDGIDKSLRSVLKQWALLCGQHMRTTVVSHGSRIIAP
                     VIPVLLCAPKFLDGSMTLGQVMQAASAFTIVQSAFGWLVDNYPRLADWNACARRTASL
                     MVSIDALERAETGDDIGRITRGEITGDALLNLNELTVTLGDGTAVVDQAEVVIEPGER
                     LLVAGDSGSGKSTLVRAISGLWPWGSGRIDIHPDRRLFMLPQRPYVPSGTLRRATAYP
                     GAAEDWTAEEIQDVLNKVGLAHLKDKIEEEAPWDQTLSGGEKQRLAFARLFLHNPDIV
                     VLDEATSALDAKGQDKLMELLTKELPKATLVSVAHRDELEAFHSRKIVLARRKGGAKL
                     VRDVDLVPRKGRGRFLDRWRRLAK"
     gene            4010..>4659
                     /locus_tag="VIY07_09655"
     CDS             4010..>4659
                     /locus_tag="VIY07_09655"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEY6382055.1"
                     /translation="MRNQLLLLLAAATIGLAVGQALAADLPRKAPAYVPPAAPPYVWT
                     GCYIGANVGGAWAHLEVTDVTNGIEASRSNGGFAGGGQIGCDYQMGVWVVGIRNMFDG
                     ARHLLTLGCWVAAAPSTATCDGLTLWGRVGYLVQPNLLFYAQGGAAWTQADLTVFDST
                     GAQVGELAKNKTGWTIGGGVEWMFVPRWSVFLEYNFMGFGTRSATVVGCGGTCAFSG"
BASE COUNT          910 a         1303 c         1461 g          985 t
ORIGIN      
        1 acttcgattg agcctgattg ccctgatcac gacaagcgca catttgaatg tccacggtgc
       61 caacacgtga agataaagat cgtcaggtac aggcggttcc gtccagaccg caagcgcgct
      121 cccggagcag catcgggcat gtgaggaatg gcggatggct tgaaccaaaa ctgccacctg
      181 ctgtcagttc tgatataggg ccggtttctt gtccaaggtc gcaaagcttt ttcgagaggc
      241 cgcttttgac cccgaaatag tcaaaacact ctgtcttgcg tacgattacg caatcagccg
      301 gatgcacggt acggaccagc cgaatatcgt gcaggaagtg atcgcgcagc gcattatttc
      361 catggctcgg aacggtgaag acgacttgga ccgtctttgc gccggcgcgc ttaagggcct
      421 cgaatttaag tcgtttgatt gaatcattct gtgaccgtga acacttccct gctaatcacc
      481 acgacttttg gaagcgcacg cggccttcga gcagacgatc agaaagtact tgcaggccac
      541 acgggaacga tccttcagag tggagcgttt cgcgcaggcg ctatgcctcc ttgaatgagg
      601 cttcgcgctt tctgagagcg tcagccccat aagatcgagg tgagcttaag aagatcgcgg
      661 ttaagaatgt ctgacgtcac aatcccgata taaggtgcga tcggggttga acaggcctca
      721 gagcgcatca atgcatcaaa gccaaatgca ctacctgccg tggcgccggg atacttctcg
      781 gcgctggtgg ttgctttcat cgtgcttctg ttgctcatcc agttgggggc tctgcgctac
      841 gcgtacatgc ggctgggagt aagctcacga acggcgctta tcctgctctt tggctccctg
      901 atcggcagct atttcaacat tccgatcgcg cagctcccac aagagcacgt cgtgatgggc
      961 cgcgagatcg attttttcgg gatgcgttac gccgttcctt acgtcgtaca gtggccgggc
     1021 acggtcctcg ctgtgaacgt cggcggggct gtcattccga ccatcatgtc ggcatacctt
     1081 ctgtttaggt acgatctctg gggccatgca gctatcgcca tcgcggttgt tgcgatcgca
     1141 tgctacgcgc ttgccgagcc gatacccggc ctcggcatcg ccatgcccgt cctcgttcca
     1201 gccctggtga cctgcatcgt ggcgctgatc ctgtcgcgaa tacatgccgc gcaactggcc
     1261 tatattggtg gcagcctcgg cactcttatt ggcgcggact tgttcaatct tggcaaaatt
     1321 tctggacttg gcgcaccggt ggcatcgatc ggaggagcgg ggacgttcga cgggatcttt
     1381 ctggtcgcca ttctcgccgt tttgcttgcg agtctgacgg gtccgaaggc cgcgactacg
     1441 tagcagctta gacttaggga acccattgat cccattgccg ttattaggca tgggcaacgg
     1501 caaagcaaaa tcctcgaaca agcagtcaac cgccaaaacg agttctgacg cagaaccctc
     1561 tgcgcgaacc tcgtcagggg cgaaatccag atcgcccgag agcaaagcgt cccccagacg
     1621 tagacggaac gccagggctc cggacgacag ctccaaaaag cttaccgaca ggaagctcaa
     1681 aaagtccggc aagaattctg gcaccaaatc gtccaaagag gccgagcccg atgttgctga
     1741 atcggcaaag gtcgaaccgc caccgccgga gattgccgag cccgatgaga caatgtcggc
     1801 agaagaaatt gaacaggcgc gcaagcgcta tctgctgaag cggttctgga tctcggcgcg
     1861 cgggttctgg ggaaaaagcg gggatcggat cgcctggatt gccacgatcg ggctctttct
     1921 gctgatcgtt gtcaatgtcg ctgtgcaata cggtattaac gtctggaatc gagagatctt
     1981 tgatgccatc gaaaagcgtg actccgcgac tgtcctctgg ctgtcagccg tcttcttccc
     2041 gttggcattc gcgagcgtcg gactcggtgt cgcggaggtt ttcgcgcgta tgggcatcca
     2101 gcggcgctgg cgcgcgtggc tgaccgacaa tgtgttgtcg cgatggctga gcaacggacg
     2161 ctactaccag ctcaatctcg tagccggcga ccacaagaat ccggaatacc gcatcgccga
     2221 ggatttgcgg atcgcaaccg atgcgcccgt cgacttcgtc gccggcgtca cctcggcgct
     2281 gctgtcggcg gcgaccttca tcgctgtgct ctggaccatc ggtggcgcgc tcaccgtttc
     2341 cgtcgggggc acgacgctga ctattcccgg attccttgtt gttgcggcga ttgcctatgc
     2401 ggctattgcc agcacggcga tggccgcgat cggccgtaga ttcgttgcga tctctgaaag
     2461 tcgaaaccag gccgaagccg aatatcgcta tgtgctgacc cgcgtgcgtg aacatggcga
     2521 aagcatcgcg ctgcttggcg gcgaagcgga agagcgcgac ggcatcgaca aatccttgcg
     2581 cagtgtgctc aagcaatggg cgctgttatg cggccagcac atgcggacca cggtcgtgtc
     2641 gcacggatcc cgcatcattg cgccggtgat tccggtgttg ctgtgcgcgc cgaaattcct
     2701 cgacggcagc atgacgctcg gccaggtgat gcaggcggca tcggccttca cgatcgtgca
     2761 gagtgcgttt ggctggctgg tcgacaatta tccgcgcctt gcagactgga atgcctgcgc
     2821 gcggaggacc gcctcgctga tggtgtcgat cgacgcgctg gagcgcgccg agactggcga
     2881 tgacatcggc cgtattacgc gcggcgaaat cacgggtgat gccctgctca acctcaacga
     2941 gctgacggtg accctcggcg atggcaccgc ggttgtggat caggccgagg tggtgatcga
     3001 acctggagag cgtttgctcg ttgcgggcga ctccggcagt ggcaaaagta ccctggttcg
     3061 cgcgatttcg gggctctggc cgtggggcag cggccggatc gatattcatc cagaccgcag
     3121 gcttttcatg ctgccgcagc ggccttatgt gccctccggg accttgcgcc gtgccacggc
     3181 gtatcccggc gctgccgagg actggaccgc cgaggagatc caggatgtgc tcaacaaggt
     3241 cgggctcgcg catctgaagg acaagatcga ggaggaggcg ccgtgggacc agaccctgtc
     3301 gggcggggaa aagcagcggc tcgcgtttgc aaggttattc ctgcacaacc ccgacatcgt
     3361 tgtgcttgat gaagcaacgt cggcgctcga cgcaaaaggc caggacaaat tgatggagct
     3421 cctgaccaag gagctgccga aggcaacgct ggtcagcgtc gcgcatcgcg acgaactcga
     3481 agcgtttcac agccggaaga tcgtgctggc gcggcgcaag ggcggcgcaa agctcgtgcg
     3541 cgacgttgat ctcgtgcctc gcaagggcag ggggcgattt ttggatcgtt ggcgccgatt
     3601 ggccaagtaa ggtcacttat cgggtgcgaa gtaagccaaa tagaaggggc tcggcgtcga
     3661 ggcgagcccc ttgggcgctt gtacacgact tgtaaaccat gcgacggcga taatcgcggg
     3721 catcgattcg tggggtgagc gatgggaaaa ttgttggcat tcgtttgtgc gctggttctt
     3781 gccgtcggcc ttgctggctg tgtaggcaaa gggaaagctc ctgttggcaa aggcaaggcg
     3841 ccggtcgttc aaacccgggg ctgatcagcc aagctttcca attatcggct atctctcaac
     3901 gacgtctttg tctcgttcaa gacgcttgcc cgagatgcgc gagaatgaat ggcagcctta
     3961 tgcgaaatgg ccgcgcgctg tttggcacga gcgccatagg agaatgatga tgcgaaatca
     4021 gttattgctg ctgcttgctg ccgcaactat tggtctggct gtgggccagg cattggcagc
     4081 tgacctgccg agaaaagccc cggcctatgt gccgccggcg gcaccccctt atgtttggac
     4141 cggatgctat atcggtgcca acgtcggcgg cgcctgggcg catctggaag tgaccgatgt
     4201 caccaacggt atagaagcat cgcgttccaa tggcggcttt gccggcggcg gccaaatcgg
     4261 ctgcgactac caaatgggcg tctgggtggt cggcattcgc aacatgttcg acggggcacg
     4321 gcatttgttg accctgggtt gttgggtggc agcggcaccg tcgacggcca cgtgcgatgg
     4381 tttgacactt tggggtcgtg tcggctatct cgtgcagcct aacctgctgt tctacgcgca
     4441 ggggggcgcg gcttggacac aagcggatct cacggttttc gacagtacgg gcgcgcaggt
     4501 tggcgaactc gccaagaaca agaccggatg gacgatcggc ggcggcgtcg aatggatgtt
     4561 cgtgccgcgc tggtcggtct ttcttgaata caacttcatg ggcttcggca cgcgaagtgc
     4621 aaccgttgtc ggttgtggcg gcacgtgcgc gtttagtgg
//
LOCUS       DATDHO010000506         1780 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_420358, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000506 DATDHO010000000
VERSION     DATDHO010000506.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1780)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1780)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1780
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_420358"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..938
                     /locus_tag="VIY07_09660"
     CDS             <1..938
                     /locus_tag="VIY07_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382056.1"
                     /translation="RSMHDRFPTTPFYIVGKEISLEDIRLTLHKMADRFVEHPSSVLL
                     LTNLAYAEAPWLAVKSLSAATSLVWKELAMEGNTAHSFEKQITDLEPFLSDNWKARVS
                     PKSGNPVYERPVILVIHRSDHRFLLDQIVPKPGGTVADYDLVIASQPYRARASLEFKA
                     KRVLAPLARALGPGGRMIAIHSYGRDPGMEIINRIWPNDNPFTHSRHDLLKEVKHELG
                     SAGRDLNFNAYSDQRSLFRYDMHTLPSEISSSIGTSTLLAAWNAAIYVGQIEDDRLSD
                     VNSDRRYIEATRDVLQQHGGLWFYDESFVISRRRE"
     gene            953..>1780
                     /locus_tag="VIY07_09665"
     CDS             953..>1780
                     /locus_tag="VIY07_09665"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEY6382057.1"
                     /translation="MTTDILACKFAVEATRPSASEVAQLREILEPGTSVYVTAVPTGA
                     AEEIVTAAAALRNAGLEPVVHLAARRLKSVEALQDMLSRLTGDAGVRRLLVIGGDTDA
                     AGPYVDALAVIQKGELRTRGIEEIGIGAYPEGHPRISSERLEASIDEKIASAIAQGLR
                     VHIVSQFAFSGEHIIAWLKRLRGSGIKHPVGIGLAGPTSVPALIRYAKRCGVSASLRG
                     LMSGAATGLVGNVGPDRIIDILRTSQSELGDTHLHYFSFGGVVSTARYARDLAQSGIE
                     "
BASE COUNT          350 a          542 c          532 g          356 t
ORIGIN      
        1 tgcgctcaat gcacgaccgc ttcccgacta cgcctttcta tattgtcggc aaggaaatca
       61 gtctcgagga tatccggctt acgctgcaca agatggcgga tcgctttgtc gagcatccat
      121 cgagcgtgct tttgcttaca aacctcgcct atgccgaagc gccctggctg gcggtgaaat
      181 cactgagcgc ggctaccagt ctggtgtgga aagagctggc gatggaaggc aacaccgcgc
      241 acagcttcga aaagcagatt accgatctcg aaccattcct gtccgacaac tggaaggcgc
      301 gcgttagccc gaaaagcgga aatccggtct atgagcggcc ggtcatcctg gtgatccatc
      361 gcagtgacca ccggtttctg ctcgaccaga tcgtgccgaa gccgggcggc acagtcgccg
      421 actatgacct cgtcattgcg tctcagccct atcgcgcgcg cgcttcactg gagttcaagg
      481 caaagcgggt gcttgcgccg ctcgcccgcg cgctggggcc tggcggccga atgatcgcaa
      541 tccattccta tgggcgggac ccgggaatgg aaatcatcaa ccggatctgg ccaaacgaca
      601 atccattcac ccacagccgg cacgacctgc tcaaggaagt gaagcacgaa ctcggatccg
      661 cgggccgaga tctcaacttc aatgcctact ccgatcagcg ctcattgttc cgctacgata
      721 tgcatacgct tccgtcggaa atttcatcgt cgatcggcac ctcaacactg ttggcggcat
      781 ggaacgcggc aatctatgtg gggcagatcg aagacgaccg tctttccgac gtgaacagcg
      841 atcgtcgcta tatcgaggcg acgcgcgacg tgctgcagca acatggcggc ctctggttct
      901 acgatgaatc gttcgtcatt tcgcgtcgac gtgaatgaac gcgggcccac gcatgaccac
      961 cgatattctt gcatgcaaat tcgcggtcga ggcgacccgg ccaagcgcct ctgaggttgc
     1021 tcaacttcgt gaaatcctcg agccaggcac atcggtttat gtcaccgccg ttccaacggg
     1081 cgccgccgaa gaaatcgtca cagcggctgc cgcactgcgc aacgccgggc tcgagccggt
     1141 cgttcatctt gcggccaggc ggctgaagag tgtcgaggcg ctgcaagata tgctgagccg
     1201 cctcaccggc gacgccggcg tgcgccgtct tctggtcatt ggcggcgaca ccgatgccgc
     1261 gggaccgtat gtcgatgcgc tggccgtgat tcagaaaggt gagttgcgca cgcgcggtat
     1321 cgaggaaatc ggtatcggcg cttacccgga aggtcatccg cgtatttcgt ccgagcgcct
     1381 cgaagcctcg attgacgaaa aaattgctag tgcgatcgcg caaggattgc gcgtacacat
     1441 tgtgagccag ttcgcgttct ccggcgagca tatcatcgcc tggctcaagc ggctgcgcgg
     1501 cagcggcatc aagcatccgg tcggtatcgg tcttgcgggg ccgaccagcg tgcccgcgct
     1561 catccgttat gccaagcgct gcggcgtgtc ggcgtcgctg cgcggattaa tgtcaggggc
     1621 ggcgaccggc cttgtgggca atgtcgggcc ggaccgcatc atcgatatcc tgcgcacctc
     1681 gcagagtgag ctcggtgaca cgcatctgca ttacttctcg tttggtggcg tggtttcaac
     1741 cgcccgctat gcgcgcgact tggcgcagtc aggcattgaa
//
LOCUS       DATDHO010000507         2110 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_123860, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000507 DATDHO010000000
VERSION     DATDHO010000507.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2110)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2110)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2110
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_123860"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            15..1346
                     /locus_tag="VIY07_09670"
     CDS             15..1346
                     /locus_tag="VIY07_09670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HEY6382058.1"
                     /translation="MASAGLTVAKAIVGFTTGSLAILSEAGHSLIDLGATVMTYVAVR
                     ISGKPADEEHHYGHGKVEAVSALAETALLFLLAGIVIWEAIKRLTQHEGHVVEATIWA
                     FGVIIVSIVVDFFRARALTHTAEKTSSHALEADALHFSSDLWSSLAVLIGLFGVHFGL
                     PWADSVAALVVAILVCVAGWRLGRRTVDTLTDVAPPGAAEKITTIAARVPGVVRVEQV
                     RARAVGEQTFIDLRLTVSRTLPLDRVSALKDDVAAALREQIPGAEPVVTTDPVALDNE
                     TVLDCIMVIARNRALAVHHVTVHELKDKLAVSLDLEVDGKLSLRAAHDMADGLESAIA
                     TELGPHVEVETHIEPLEPQDAAGREAPPERVKAVELALSELAAKGRNIRDIHDVRVRE
                     TDEGEIVNFHCQVDPQLSVQSVHEDVDALERALKQLSPPIKRVIGHAEPMG"
     gene            complement(1354..>2110)
                     /locus_tag="VIY07_09675"
     CDS             complement(1354..>2110)
                     /locus_tag="VIY07_09675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY6382059.1"
                     /translation="AIGDRVGVPWLGATCGICPYCRGNRENLCDNPAFTGYTRDGGFA
                     THVIADARFCFRLGEAGEDAEIAPWLCAGLIGWRSYRRAGEGTTVGLYGFGAAAHILA
                     QIAKWHGRRVFAFTRNGDQAAQDFARSLGAEWAGASEDSPPEPLDAAIIFAPVGALLP
                     VALKAVKKGGRVVCGGIHMSDIPSFPYALLWQEREVVSVANLTRADAREFLEIAPKAG
                     VKCQITRYPLLRANEALSDLRERRLHGAAVLIP"
BASE COUNT          415 a          649 c          627 g          419 t
ORIGIN      
        1 cactttcttc gatcatcgct tcggccgggt tgaccgtagc caaagcaatc gtcggcttta
       61 ctaccggttc gctggcgatc ctgtcggagg ctggccattc gcttattgat ctcggcgcca
      121 ccgtcatgac ctatgtcgct gtccgtattt cgggcaagcc agcggatgaa gaacaccatt
      181 acgggcacgg caaggtagaa gcggtttcgg cgctagccga aaccgctttg ctgtttcttc
      241 tcgccgggat cgtgatctgg gaagccatca agcgacttac ccagcatgaa ggtcatgttg
      301 tcgaggccac aatctgggcc ttcggcgtca ttattgtttc tatcgtggtt gattttttcc
      361 gggcacgcgc actcacacat acggcagaaa agacttcgag ccacgcactg gaagcagacg
      421 cgttgcactt ttcgtctgat ctatggtcat ccctcgcagt tttgatcggt ctctttgggg
      481 tccatttcgg attgccttgg gcggactcgg tggcggcgct cgtcgtggca attttggtct
      541 gcgtggcggg ttggcgcttg ggaagacgga cggtcgatac ccttaccgat gtcgcgccac
      601 ccggtgccgc ggaaaagatc acgaccattg ccgcacgcgt gccaggcgtg gtccgtgtgg
      661 agcaggtgcg cgcacgtgcc gtcggcgagc aaaccttcat cgatcttcgt ctgaccgtga
      721 gtcgcactct gccgctcgat cgtgtcagcg ctctcaagga cgacgtagcg gccgcgcttc
      781 gcgagcagat tccaggggcc gaaccagttg tgactaccga tcccgtcgcc ctggacaacg
      841 aaaccgttct tgactgcatc atggtcatcg cgcgcaaccg cgcgcttgcc gttcatcacg
      901 tcacggttca tgaactcaag gacaagctgg cggtttcgct ggatctcgaa gtggacggaa
      961 agctttcgct gcgtgccgca cacgatatgg ccgatggcct ggagagtgcc atcgcaaccg
     1021 agctcggtcc gcacgtcgag gttgaaaccc acatagagcc gttggagccg caggacgcag
     1081 cgggccgcga ggcgccgccc gagcgggtca aggcggtgga gctggcacta tccgaactcg
     1141 cagccaaagg gcgcaacatc cgcgacatcc atgacgttcg cgtgcgcgaa accgatgagg
     1201 gtgagatcgt caactttcac tgccaggtag atccgcagtt gagcgtacag agcgtacacg
     1261 aggacgttga tgctctggaa cgggcgctga aacagctctc gccgccaatc aagcgcgtca
     1321 ttggccacgc cgaacccatg ggctgagtac ggtttatgga ataaggaccg ccgcaccgtg
     1381 caaacgccgc tcgcgcagat cagagagcgc ctcattggcc cgcagcaacg gatagcgcgt
     1441 tatctggcac ttcactcctg ccttcggtgc aatttccagg aactcgcgcg cgtcggcacg
     1501 agtaagatta gccaccgaga caacttcgcg ttcctgccac agcagcgcat agggaaagct
     1561 tggaatgtcg gacatgtgga tgccgccaca cacgacacga ccacccttct tcaccgcctt
     1621 gagagcaacc ggcagcaatg caccgacggg tgcgaatatg atcgcggcat cgagtggttc
     1681 gggtggagag tcttcggatg cgcccgccca ctcggcaccg agggagcgcg caaagtcctg
     1741 cgcggcttga tcgccgttac gggtgaaagc aaacacccgt cggccgtgcc atttcgcgat
     1801 ctgggcgagg atatgcgctg ccgctccgaa cccatagaga ccgaccgtcg tgccctcgcc
     1861 ggccctcctg tagcttctcc agccgatcaa tccggcgcaa agccatggag ctatttccgc
     1921 atcctcgcct gcctcgccaa gccgaaagca aaagcgcgcg tcagcgatga catgggtcgc
     1981 gaaaccgcca tcccgcgtat aaccggtgaa cgccgggtta tcgcacaggt tttctcggtt
     2041 gccgcggcag tatggacaga ttccgcaggt ggctcccaac catggcaccc cgacccggtc
     2101 tccgatagca
//
LOCUS       DATDHO010000508         3615 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_272293, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000508 DATDHO010000000
VERSION     DATDHO010000508.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3615)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3615)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3615
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272293"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..361)
                     /locus_tag="VIY07_09680"
     CDS             complement(<1..361)
                     /locus_tag="VIY07_09680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HEY6382060.1"
                     /translation="MAAQNRRQTGHKLALAALFACLAVPAAAQGVPLPSSRPSASQAQ
                     PGTPAPVAKPSVPARGQVAPAQQSPVSNPFAALLGKPSPQGALTPEQRGIIDRVNNYL
                     SGVQALTGNFIQVGPDGS"
     gene            complement(476..2887)
                     /locus_tag="VIY07_09685"
     CDS             complement(476..2887)
                     /locus_tag="VIY07_09685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEY6382061.1"
                     /translation="MRASDRSLDVIAFVFEHLREILRRRLSELAGICLIALAVLGAIA
                     LATWSVQDPSLSHATQKPIHNLLGYPGAIFSDLAMQLLGLAAILILVPEALLGWRLLA
                     HRPVGEKWRSLFWILATVLAAAFASTLPHIGSWPLPTGLGGVAGDAILRLPTTIFGAP
                     LGWLARVLLGIVLGLATAATFVVAARAPDRRERSGARDTDEEEDESAEPEEDRASPWL
                     GMIVHALLSWKARIGRMIRGETRTPAQAAHGPRHEPRFDAGDFDYENEIEDEDEEEEE
                     DAPARRRRASARAPSRRSGSGYVLPSLNLLAAPRASERTTLSHDIIEANAAALENVLQ
                     DFGVRGEIVDVRPGPVVTLYELEPAPGIKSSRVIGLADDIARSMSAVSARVAVVSGRN
                     AIGIELPNPTREKVYLRELLAGTDYNESAAKLPLCLGKTIGGESVIVDLSRMPHLLIA
                     GTTGSGKSVAINTMILSLVYRLRPDQCRMIMVDPKMLELSVYDGIPHLLTPVVTDPKK
                     AVVALKWAVREMEGRYKKMSKLGVRNIDGYNARVAEAKTKGETLTRTVHTGYDKETGE
                     AVYEKEDLDLDPLPYLVVVVDEMADLMMVAGKDIEGAIQRLAQMARAAGVHVILATQR
                     PSVDVITGTIKANFPTRVSFQVTSKIDSRTILGEQGAEQLLGQGDMLLMAGGGRISRV
                     HGPFVSDDEVEKVVRHLKSQGVPEYLEEVTAGGEEDEDGNPVFDSTGMGAADGGDLYQ
                     QAVAIVRRDRKASTSYIQRRLQIGYNRAATIMERMEEEGIVGQANHAGKREILIPEDP
                     ADERY"
     gene            complement(2900..>3615)
                     /locus_tag="VIY07_09690"
     CDS             complement(2900..>3615)
                     /locus_tag="VIY07_09690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY6382062.1"
                     /translation="LDAVDDALLARTVACYIASPSNPQGAVADRDYLARLVKLARRCG
                     CLVFADECYCEIYSEHEPPGMLEASGPDFANVVVFHSLSKRSSLPGLRVGFAAGDRRF
                     LAPYLDLRNIAAPQVPTPAQYVAIAAYNDETHVSDNRRLYSEKFDLADQIVGDRYGYE
                     RPAGGFFLWLDVSKQGGSEAVTKRLWAEAGVRVVPGRYLAREQSDGSNPGADYIRVAM
                     VQDKAATAEALHRLVAVLG"
BASE COUNT          662 a         1123 c         1145 g          685 t
ORIGIN      
        1 ggctgccatc cggaccgacc tggatgaaat ttccggtcaa cgcctgcacg ccagaaagat
       61 agttgttcac gcggtcgatg atgccgcgtt gttccggggt tagggccccc tgcgggctgg
      121 gcttgccgag tagtgccgcg aaaggattgg agaccggact ttgctgtgcc ggtgcaacct
      181 gtccacgggc gggaaccgaa ggtttggcga ccggcgcagg cgtgccgggc tgcgcttgtg
      241 acgctgaggg gcgggacgat ggaaggggaa cgccctgagc ggcggccgga acggcaagac
      301 aggcaaacaa tgctgccaac gccagtttgt ggccagtttg cctcctgttt tgagccgcca
      361 tcacgttctc cgcctcgcgc ccccgcggta tcgcgatggg ctctatatgg gccggctgtg
      421 gcgatttcgc ggcccaaacc ccagcagtct ggcttaatcg tgaagtcggc gattctcaat
      481 agcgctcgtc ggctggatct tcaggaatca ggatctcgcg cttgcccgca tggttggcct
      541 gcccgacgat cccctcttcc tccatgcgtt ccataatagt ggccgcgcgg ttgtacccaa
      601 tctgtagacg gcgctggata taggaggtcg aggctttgcg gtcacgtctg acgatggcga
      661 cggcctgctg gtagagatcg ccgccatccg cggctcccat tcccgtcgag tcaaagacgg
      721 gattgccatc ctcatcctcc tcgccgcccg cggtgacctc ttcgagatat tccggcacac
      781 cctgcgactt caggtgccga acgacctttt cgacttcatc atccgacacg aagggcccat
      841 gtacgcggct gatgcgcccg cctccggcca ttagaagcat gtcgccctgg ccgagcaatt
      901 gttcggcgcc ttgctcgccc aggatcgtgc ggctgtcgat ttttgaggtg acctgaaacg
      961 acacacgggt ggggaagttt gctttgatcg taccggtgat gacgtccacc gacggacgtt
     1021 gggtggccag gatgacatga acaccggcgg cgcgcgccat ctgcgccaag cgctggatgg
     1081 cgccttcgat atccttgccg gccaccatca tcaggtcggc catctcgtcg actaccacca
     1141 ccaggtacgg caacgggtcg aggtcaaggt cttccttttc gtagaccgcc tctccggtct
     1201 ccttgtcgta gccggtatgg acggtgcgcg tgagtgtctc accctttgtc ttggcttcgg
     1261 cgacgcgcgc attgtagccg tcgatattgc gcacaccgag cttcgacatt ttcttgtagc
     1321 ggccttccat ctcgcgcacg gcccacttca gcgcgaccac ggccttcttg ggatcggtga
     1381 cgacgggcgt aagtagatgc gggatgccgt catagacaga gagttcgagc atctttggat
     1441 cgaccatgat catccggcac tggtcgggcc gcagacgata aaccagcgac aggatcatcg
     1501 tgttgatggc gaccgatttg ccggaaccgg tggtgccggc aatcagcaaa tggggcatac
     1561 gcgagagatc gacgatcacg gattctccac cgatcgtctt tccaaggcag agcggaagct
     1621 tcgcggcgct ttcgttgtaa tcggtgccgg cgagcagttc gcgcagatac actttttcgc
     1681 gcgttggatt gggcaattcg ataccgatcg cgttgcggcc ggagaccact gcaacacgcg
     1741 ctgataccgc gctcatcgac cgcgcgatgt catcggcaag gccgatcact cgcgacgact
     1801 tgatgccggg cgccggctcc agctcgtaca gcgtcacgac cggcccaggc cggacgtcga
     1861 cgatctcgcc gcgcacgccg aaatcctgca acacgttttc aagcgccgca gcattggcct
     1921 cgatgatgtc gtgtgagaga gtggtgcgct cgcttgcgcg cggggcggcc agaaggttga
     1981 gtgagggcag cacataaccg ctgcccgagc gacgcgaggg agctcgcgca gaggcacggc
     2041 gccgacgcgc gggcgcgtcc tcctcctctt cctcatcttc atcctcgatt tcgttctcgt
     2101 agtcgaaatc acctgcatcg aaccggggct catgacgcgg accatgagcc gcctgggcgg
     2161 gcgtgcgggt ttcacctcgg atcattcggc caatgcgcgc cttccagctc aagagcgcgt
     2221 gcacgatcat gccgagccac ggggaagcgc gatcttcctc tggctccgcg ctttcgtcct
     2281 cttcttcgtc ggtgtcgcgc gcacccgatc tttcacgacg gtcgggggcg cgggcggcca
     2341 caacaaatgt tgctgctgtc gcgagaccga gcactattcc caataggaca cgcgccagcc
     2401 aaccgagcgg tgcgccgaat attgttgtcg gcaaacgcaa gatagcatcg ccggcgacgc
     2461 cgcccaggcc cgtggggagt ggccaggacc caatatgcgg cagcgttgag gcgaaggcgg
     2521 cagcaaggac cgtggcgagt atccaaaaca ggctgcgcca tttttcgccg accggtctgt
     2581 gtgccagcaa acgccagccc agcagcgctt ccggaaccag aatcagaatg gcggccaggc
     2641 cgagcaactg catagcgagg tctgagaaga ttgcgccggg atagccgagg agattgtgga
     2701 tcggcttttg cgttgcgtgg ctgagcgacg gatcctggac cgaccatgtg gccagggcta
     2761 tggcgccgag caccgcgagt gcgatgagac aaatgccggc gagctcgctc aggcgccgcc
     2821 gaaggatttc acgcaaatgc tcgaagacga atgcgatgac gtcgagactg cggtctgatg
     2881 ctcgcatgcg gttaagtcct caacccagca cggcgacgag gcgatgcagc gcctccgccg
     2941 tggccgcctt gtcctgcacc atcgcgaccc ggatatagtc cgcgccggga ttgcttccgt
     3001 cgctctgttc acgcgcgaga tagcgccccg gcacaacgcg aacacccgcc tcggcccaca
     3061 ggcgctttgt tacagcctcg ctgccacctt gtttcgagac gtccagccag aggaaaaatc
     3121 cgccggcagg gcgttcatac ccgtaacggt cgccgacgat ctgatcggcg agatcgaatt
     3181 tctcggaata gagcctgcgg ttatcgctga catgtgtctc gtcgttatac gcggcgatcg
     3241 ccacatattg ggcgggtgtc ggcacctgcg gtgcggcgat gttccgcaag tcaaggtatg
     3301 gcgcgagaaa ccggcggtcg ccggcagcga agccgacgcg caggccgggc aggcttgagc
     3361 gcttcgacag cgaatggaac acgaccacgt tggcgaagtc gggcccagaa gcttccagca
     3421 tgccgggcgg ttcgtgctcg ctgtaaattt cgcagtagca ttcgtcggcg aacaccagac
     3481 agccacagcg gcgcgccagc ttcaccagcc tcgcgagata gtcgcgatcg gcgacggcac
     3541 cctgcgggtt cgacggggag gcgatgtaac aggcgaccgt gcgcgcgagc agcgcgtcgt
     3601 cgaccgcatc gagat
//
LOCUS       DATDHO010000509         3980 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_222345, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000509 DATDHO010000000
VERSION     DATDHO010000509.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3980
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_222345"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /locus_tag="VIY07_09695"
     CDS             complement(<1..364)
                     /locus_tag="VIY07_09695"
                     /inference="COORDINATES: protein motif:HMM:NF021423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2125 domain-containing protein"
                     /protein_id="HEY6382063.1"
                     /translation="MMRNPESLQSRRRTGLRYAILVFIVLALAAGWSGFWKFAAGKAE
                     SAIEGWRAREAQAGRIYRCASQRVGGYPFRIEVECDQASALLSNSQPPLELKTTNLVV
                     VAQVYQPGLLISEFRGPLT"
     gene            484..1053
                     /locus_tag="VIY07_09700"
     CDS             484..1053
                     /locus_tag="VIY07_09700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003839 - gamma-glutamylcyclotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0061928 - glutathione specific
                     gamma-glutamylcyclotransferase activity [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HEY6382064.1"
                     /translation="MNAPFEQSNEDFWVFAYGSLMWRPGFDFLERRNARLVGAHRALC
                     VYSFVHRGTPEKPGLVLGLDRGGNCRGIAYRVASSRRAGTIKYLRAREQVTRVYREAW
                     RRVWLDGDAQESVHALCYVVDRGHRQYAGQLSLAQQLHYVRQGHGRSGPCRDYVLAAV
                     KQLQMLEIRDTELQLLAEQLKGPHQSAAG"
     gene            complement(1073..1801)
                     /locus_tag="VIY07_09705"
     CDS             complement(1073..1801)
                     /locus_tag="VIY07_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEY6382065.1"
                     /translation="MILLRSIAFNVLFYLNTFVYLIAALPTFFMPYRAIIAVAKSWAR
                     TNLVLLRVVAGIDCAIRGREKIPKGPLIVASKHQSAWETFALLPLLDNPVFIVKRELQ
                     WIPIFGWLMIKGRMVAVRRGGGAQTLSAMIERARIELADNRQLIIFPEGTRRPAGAEP
                     RYKIGVVHLYTAEGVPCVPIALNSGLYWPRRSWLRIPGTIVAEILDPIPPGLNKEEFF
                     ERLQKDIESATARLIAEGQAKINR"
     gene            complement(1812..2423)
                     /locus_tag="VIY07_09710"
     CDS             complement(1812..2423)
                     /locus_tag="VIY07_09710"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEY6382066.1"
                     /translation="MFAGLARWIGFLTMAAGATGVILLVGGFVWFVSQIGSEEITLDT
                     KADGIVALTGAAARIPDAIELLATNRGKRLLITGVHRATSSKEIARLTPLYTKYFTCC
                     IDLDRTALNTLGNALETRRWAREHNFNSLIVVTSNWHMPRAMAELAHQLPDVTLTAYP
                     VISEKVKSEPWWSSVDTARFLFAEYLKYMLAVARMHLDTDGAI"
     gene            complement(2425..3384)
                     /locus_tag="VIY07_09715"
     CDS             complement(2425..3384)
                     /locus_tag="VIY07_09715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382067.1"
                     /translation="MVEMGARKGTASARAPVEPLPRFETPLVPRNSISGRALVAVVAI
                     MTFLASLTTGAAVLVSRAAGEWQSDIAREVTIQVVPVAGRDVDASVDKAVSVARASPG
                     ITEVRPYSKEESARLLEPWLGNGLSLDDLPVPRLIVIKIAANAGPDLAQLRRQLADEV
                     PGAMLDDHRGWIDRMRAMAGTAVGAGIGVLVLMFVATMLSVTFATRGAMATNKSVIEV
                     LHLVGAKNGFIARHFQHHFLILGLQGGVIGGGAAIVLFALAGVISHWFAGSAGADQTS
                     ILFGSFSIGLAGYAAVLGQVALIALVTALTSRHTVNSTLEMID"
     gene            complement(3393..3980)
                     /locus_tag="VIY07_09720"
     CDS             complement(3393..3980)
                     /locus_tag="VIY07_09720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6382068.1"
                     /translation="MDPHSFQFLTGPSGAGKTSLLRLLFLSLRPTRGLITQFGHDVAT
                     LSRDAVATLRRRIGIVFQDFRLLDHMTTYENVALPLRVLGRPEESYRDEVVELLNWVG
                     LGERMWALPPVLSGGEKQRAAIARAVIARPQLLLADEPTGNVDPTLAQRLLRLFIELN
                     KSGTSVVIATHDIALMDQYDARRLVLHDGRLHIYD"
BASE COUNT          832 a         1222 c         1190 g          736 t
ORIGIN      
        1 cggtcagggg cccacgaaat tcgctgataa gcaggccggg ctgatagacc tgtgccacta
       61 caacaaggtt ggtggtcttg agctcaagcg gaggctggct gttactcaac agcgccgaag
      121 cctggtcgca ctcgacctcg atccggaacg gatatccgcc gacacgctgc gaggcgcagc
      181 gatagatccg gcccgcctgg gcttcacgcg cgcgccagcc ttcgatggcg ctttcggcct
      241 tgccggctgc gaatttccag aagccgctcc agccggcagc caacgcaagc acgataaata
      301 cgagaatcgc atagcgaagc ccggtgcggc gacgcgattg caggctctct gggttacgca
      361 tcatggattc aaaacctgcc gaatgcggcg tttctgcgcc cggccagcgg cagttgcacg
      421 ggaactgccg ccctgttacg cggtcactat cctttcaacg ccgtggtcgg ctcccctgcc
      481 acgatgaatg cccctttcga gcaaagcaac gaggacttct gggtcttcgc ttatgggtcg
      541 ttgatgtggc ggccgggctt tgactttctg gagcggcgca atgcccgcct tgtcggcgcc
      601 caccgcgcgc tttgtgtcta ttcgttcgtg caccggggaa cgccggagaa accggggctg
      661 gtgctggggc tcgatcgcgg cggcaattgt cgcggaatcg cctatcgggt ggcctcctcg
      721 cgacgcgccg ggacaatcaa atatctgcgc gctcgcgagc aggttacccg ggtctaccga
      781 gaggcctggc gcagggtctg gcttgatggc gatgcgcaag aaagcgtgca cgcgctttgc
      841 tatgttgtcg accgcggcca tcgccaatat gcggggcagc tcagtcttgc acaacagctg
      901 cactacgtca ggcaaggtca cggccgctcg ggcccctgcc gcgattacgt tctggcggcg
      961 gtcaaacaac tgcaaatgct tgaaatccgc gatacggaat tgcagttgct cgccgaacag
     1021 ctaaaaggcc cccatcaatc ggccgctggc tgacccgcac ccgcaatacc tgtcatcgat
     1081 ttatcttagc ctgcccctcc gcgataagcc gcgccgtcgc gctttcgatg tccttttgca
     1141 agcgttcgaa aaactcctcc ttgttcagtc cgggcggtat cggatcgagg atctccgcca
     1201 ctattgtgcc cggaattcgc agccaggaac gtcgcggcca gtacagcccg gaattgagcg
     1261 caatcggaac gcagggcacc ccttcggcgg tgtaaaggtg cacgacaccg atcttgtagc
     1321 gtggttccgc tccggcgggc cggcgcgtcc cctccgggaa aataataagc tgccgattgt
     1381 cagccaattc aattcgcgct cgttcaatca tcgcgctcag tgtctgagcg ccgccgccgc
     1441 gccgcaccgc caccatgcgc cccttgatca tgagccagcc gaaaatggga atccactgca
     1501 actctctttt tacaatgaag acaggattgt cgagcagcgg cagcagggca aacgtttccc
     1561 acgccgactg atgtttggag gcgacgatga gcggaccttt ggggattttt tcgcggcccc
     1621 gtatcgcgca atcgatgccg gcgactacgc gaaggagtac gagatttgtg cgggcccacg
     1681 acttcgccac cgcaatgatg gcgcgatagg gcatgaagaa ggtcggcaac gccgcgatca
     1741 aatacacgaa cgtgttgagg tagaacaata cgttaaaggc tatggaacgg agcaggatca
     1801 accgacgctc cttagatagc gccatcagta tcgaggtgca tgcgggcaac tgcgagcatg
     1861 tatttcagat attccgcaaa aagaaaacgc gcagtgtcca cgcttgacca ccatggctcc
     1921 gattttacct tttccgatat taccggatac gcagtcagcg tgacgtcagg cagttggtgc
     1981 gcaagctccg ccatcgcgcg cggcatgtgc caattcgaag taacgacgat caaggaattg
     2041 aagttgtgct cgcgtgccca gcgccgggtt tcgagtgcat taccgagcgt attaagtgcc
     2101 gtccggtcga gatcgatgca acaggtaaaa tacttggtgt aaagaggggt cagccgcgcg
     2161 atctcctttg aactcgttgc gcgatgcacg cccgtgatca acaggcgctt gccgcggttg
     2221 gttgcaagca gctcgatcgc atcgggaatg cgggcggcag cgcccgtgag cgccacgatg
     2281 ccgtccgctt tggtgtcgag cgttatctcc tcgctcccaa tttgcgatac aaaccagaca
     2341 aatccgccca caagcaatat gacccccgtg gcgccggcgg ccattgttag gaaaccgatc
     2401 cagcgagcaa gaccggcaaa catgtcaatc gatcatttca agcgtgctgt tgacggtatg
     2461 gcgggacgtc aaagcggtaa caagtgcaat tagcgcgacc tggcccagca cagctgcata
     2521 gccggcgagg ccgatcgaga atgaaccgaa aagtatcgat gtctgatcag cgccggcgct
     2581 gcccgcgaac cagtggctga tcacgccggc gagcgcgaac aggacaattg cggcaccgcc
     2641 gccgatgaca cccccttgca gtccgagaat cagaaaatga tgctgaaaat gccgcgcgat
     2701 aaaaccattt ttggctccta ccaaatgcag cacctcgatg accgacttgt ttgtcgccat
     2761 ggcaccgcgg gtcgcaaagg tgaccgataa catcgtcgcg acaaacatca ggactaatac
     2821 gccgatgccc gcgccgactg cggtaccggc catcgcccgc atgcgatcga tccagccgcg
     2881 atggtcatcg agcatggcgc ccgggacctc atcggccagc tggcgccgca attgcgcaag
     2941 gtccggccct gcattcgctg caatcttgat cacgatcagg cgcggaacag gcaggtcgtc
     3001 gagggaaagc ccgttgccaa gccagggctc cagtagtctg gcggattctt ctttcgagta
     3061 gggccgcacc tccgtgatgc cgggggacgc gcgggcgact gagaccgcct tgtcgacgct
     3121 ggcgtcgaca tcgcgaccgg ccaccggaac aacctggatg gtcacctcgc gcgcaatgtc
     3181 tgattgccac tcgcccgcgg ctctgctcac gagcacggct gcgcccgtcg ttaacgatgc
     3241 aaggaaagtc atgatggcaa cgaccgcgac aagcgcgcgg ccggaaattg aattgcgcgg
     3301 cacgaggggc gtctcgaaac gcggcaatgg ttccaccggc gcccgtgccg acgccgttcc
     3361 tttccgcgcg cccatttcca ccatgcgacc cctcagtcgt aaatatgcag ccggccgtcg
     3421 tgcaggacga gtcgccgcgc atcgtactga tccatgagag cgatgtcgtg ggtagcaatg
     3481 actaccgacg tgcccgactt gttcagctcg atgaacaggc gcaacaatcg ctgcgctaga
     3541 gtcggatcga cgttacccgt aggttcatcg gcaagcagca attgaggtcg cgcgatcacg
     3601 gcgcgcgcga tcgccgccct ttgtttttcc ccgccggaga gcaccggcgg cagcgcccac
     3661 atccgctcac cgagccccac ccagttgaga agctccacga cttcgtcgcg atagctttcc
     3721 tcgggacggc ccaagacgcg caaaggcagg gcaacgtttt cataggtcgt catatggtca
     3781 aggaggcgaa agtcctggaa cactatgcct atgcgccgcc gcagcgtcgc aaccgcatcg
     3841 cgggaaaggg tcgctacgtc atggccgaac tgggtgatca gccctcgcgt cggccgcagt
     3901 gagagaaaca ggagccggag cagagaggtc ttgccggcac ccgaggggcc ggtcaggaac
     3961 tgaaaggaat gcggatcgat
//
LOCUS       DATDHO010000510         4809 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_370479, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000510 DATDHO010000000
VERSION     DATDHO010000510.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4809
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370479"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(121..2535)
                     /gene="pheT"
                     /locus_tag="VIY07_09725"
     CDS             complement(121..2535)
                     /gene="pheT"
                     /locus_tag="VIY07_09725"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEY6382069.1"
                     /translation="MKFTLAWLKEHLDTDASLAEIVDRLTMIGLEVEKVEDKASQLKP
                     FVIASVISVEKHPNADRLRVCLVDIGDGKPIQVVCGAPNARSGMKGVFSPPGTFIPGK
                     NITLGVGTIRGVESRGMLCSPAELMISDDHEGIIDLPDDAPVGKPYIEWAGLGDPVIE
                     INLTPNRPDCTGVAGIARDLGATSIGTYKNRIPKPVKGAFPCPVKVTLEFGKTPPLCR
                     AFALRLVRGVKNGPSPDWLQRRLAAIGLRPINALVDITNFITFDRGRPLHVFDAAKVH
                     GNLTVRRARNGEKLLALDGTTYTLDEATCVIADENGVESLAGIMGGEATGCSDSTTDV
                     LIESALWDELNIAQTGRKLGINSDARYRFERGVDPAFMLPGLEQATQMVLDLCGGQPS
                     DMVVAGDPTPKEKIIDFPLSELPRLAGLKLPLPDIRRVLEKLGFFVAGQGERMKVAVP
                     SWRPDVQGRADIVEEVVRIVGVDRVPSTPFPREHARKPVLTTIQNRTRKAKRALAASG
                     LVEAVTWSFVSRREAELFGGGKPQLSLANPIAAELSDMRPSLLPGLIMAAQRNADRGR
                     ADVALFEVGQIFSGDRPEDQLTAASGLRRALAKPSGSGRHWSTKAQPADAFDAKADAF
                     AALSAAGSPMQAMQVLPGGPPWFHPGRSGTVQIGPQNILGHFGELHPRVVAALNAEGP
                     LVAFEVILERIPEPKQRSTRAKTPLELSPFQPVERDFAFVVDSAVKAADIIRAAQNVD
                     RKLVADVNVFDVYEGKGIEPGKKSIAIAVTIQPFEKTMTDAEIDALSEKIVAEVKKRT
                     GGILRT"
     gene            complement(2606..3688)
                     /gene="pheS"
                     /locus_tag="VIY07_09730"
     CDS             complement(2606..3688)
                     /gene="pheS"
                     /locus_tag="VIY07_09730"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEY6382070.1"
                     /translation="MTDIARLEQDLLAAVASAGDEAALEAVRVAALGKSGSVSALLKT
                     LGSMTPEERKIQGPAINGLKDRLTAAIAEAKDKLAAAALDARLNTETIDVTLPVRETP
                     AETGRVHPISQVTDELTAIFADMGFAVAEGPDIESDDYNFTKLNFPEGHPAREMHDTF
                     YFPPKSDGSRLLLRTHTSPVQVRTMLSQKPPIRVICPGRTYRSDSDQTHTPMFHQVEG
                     LVIDRGSHLGHLKWILEEFCKAFFEVDSVKMRFRPSYFPFTEPSLEVDIQCKRDKGEI
                     RFGEGDDWLEILGCGMVHPSVLRNCGLDPDEYQGFAWGLGIDRIAMLKYGMNDLRAFF
                     EADVRWLAHYGFRPLDFPTLAGGLSA"
     gene            complement(3803..4162)
                     /gene="rplT"
                     /locus_tag="VIY07_09735"
     CDS             complement(3803..4162)
                     /gene="rplT"
                     /locus_tag="VIY07_09735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEY6382071.1"
                     /translation="MARVKRGVTSHAKHKKVLKAAKGYYGRRKNTIRIAKQAVEKANQ
                     YAFRDRKRRKRTFRALWIQRLNAAVRPFGLNYSRFIAGLAKAGLTVDRKVLSDLAIRE
                     PAAFQAIVEKAKAALPA"
     gene            complement(4229..4429)
                     /gene="rpmI"
                     /locus_tag="VIY07_09740"
     CDS             complement(4229..4429)
                     /gene="rpmI"
                     /locus_tag="VIY07_09740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEY6382072.1"
                     /translation="MPKLKTKSGAKKRFKVTASGKVKYQQTGKRHGMIKRTTKTIREH
                     RGTKVLFKTDGETVKKNWLPYG"
     gene            complement(4692..>4809)
                     /locus_tag="VIY07_09745"
     CDS             complement(4692..>4809)
                     /locus_tag="VIY07_09745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEY6382073.1"
                     /translation="ELGTKLLDRVKDDVGPIAKVEQEPKFEGRQMIMVLAPR"
BASE COUNT          869 a         1472 c         1473 g          995 t
ORIGIN      
        1 ggcgggaccc atgctcgcgc gcgatatcgc cgtaaaggtc ggggcgacgg tcgagcgcga
       61 cggattcgct tatgccgatc tactgccggc ctagttgttc cactgcggaa tgaacgggcc
      121 ttacgttctc aatatgccac cggttcgctt cttgacttcg gcgacgatct tctccgacag
      181 cgcgtcgatc tccgcgtcgg tcatggtctt ctcgaacggc tgaatcgtaa cggcgatggc
      241 aatcgacttc ttgccgggct cgatgccttt gccttcatag acgtcgaaca cattgacgtc
      301 ggctacaagt ttcctgtcga cgttctgcgc agcgcgaatg atgtcggcgg ccttgaccgc
      361 actgtccacc acaaaggcga aatcacgctc tacgggctgg aacggtgaca attccagcgg
      421 agttttcgcc cgcgtgcttc gttgcttcgg ctcgggaatc ctctcgagaa tgacttcgaa
      481 cgccacaagc ggaccctcgg cattcaacgc ggcaaccacg cgcggatgca attcgccgaa
      541 gtgacccagg atattttggg gtccgatctg cacggtcccg ctgcggccgg gatgaaacca
      601 tggtgggccg cccggcagga cttgcatcgc ctgcatgggg cttcccgccg ccgacaatgc
      661 cgcgaaggcg tcggcctttg cgtcgaacgc gtcagccggc tgcgccttgg ttgaccaatg
      721 gcgaccgctg cccgacggct tggcgagcgc gcgacgcaac ccgctggctg cggtcagctg
      781 atcctctggt ctatcgccgc taaaaatttg tcccacctcg aacaaggcga cgtcggcacg
      841 accacggtcg gcattgcgtt gcgctgccat gatcagaccc ggaagcaggc tcggacgcat
      901 gtcggagagt tcggcagcga tgggattggc gagcgagagc tggggcttgc cgccgccgaa
      961 caactccgct tcccgcctgg aaacgaacga ccaggtgacg gcctcgacga ggccgctggc
     1021 ggcgagcgcg cgcttggcct tgcgggtccg attctggatc gtggtgagca ctggcttgcg
     1081 cgcatgctcc cgagggaatg gcgttgacgg cacgcgatca acgccgacaa tgcgcacgac
     1141 ttcctcgaca atgtccgccc gcccctgaac atccggtcgc caggacggca cggcaacctt
     1201 catgcgctcg ccctggccgg cgacgaagaa gccgagtttc tcgagaacgc ggcgtatgtc
     1261 aggcaggggc aatttcagcc cggcaaggcg cggcagctcg ctcaatggga aatcgatgat
     1321 cttttcttta ggcgtcgggt ctccggcaac gaccatgtcg gagggctgtc cgccgcaaag
     1381 gtcgagcacc atttgcgtcg cctgttccag tcctggcagc atgaacgccg gatcaacgcc
     1441 gcgctcgaag cgatagcgcg catcggaatt gatgccgagc ttgcggcccg tctgggcgat
     1501 attgagttcg tcccaaagcg ccgactcgat cagcacgtcg gttgtgctat ccgagcaacc
     1561 cgtcgcttcc ccgcccatga tccccgcgag cgactcgacg ccgttctcgt cggcaatcac
     1621 gcaggtcgct tcgtcaagtg tgtaggtcgt gccgtcgagc gcgagcaact tctcgccatt
     1681 cctggcgcga cgcacggtca ggttgccgtg tacttttgca gcgtcgaaga cgtgcagcgg
     1741 ccgaccacgg tcgaaagtga tgaaattggt aatgtcgacc agtgcattga tcggccgcag
     1801 gccaatcgcc gcgagtcgtc tctgcagcca atccggcgac ggaccatttt ttactccgcg
     1861 aaccagccgc agcgcgaaag cccggcagag cggaggtgtc ttgccaaatt cgagcgtgac
     1921 cttgaccggg caggggaatg ctcccttcac cggcttggga attctgttct tgtacgtgcc
     1981 gatcgatgtg gcgccgagat cgcgcgcgat gccggcaacg ccggtgcaat ccggacgatt
     2041 gggcgtgaga ttgatctcaa tcacgggatc gccgagaccg gcccactcga tatagggttt
     2101 gccgaccggc gcatcgtcgg gcaggtcgat gattccctcg tgatcatcgg aaatcatcag
     2161 ctcggccggc gagcacaaca tgccgcggct ttcgacgccg cggatcgtgc caacgccgag
     2221 cgtgatgttc ttgccaggaa tgaaggtgcc cggcggcgaa aacacgcctt tcatgccgct
     2281 gcgcgcattt ggagcgccgc agacgacctg gatcggcttg ccgtcaccaa tgtcgaccaa
     2341 gcaaacgcgg aggcgatcgg cgttcggatg tttttcgacc gagatcacgg atgcgatgac
     2401 aaatggcttg agctggcttg ccttgtcctc gactttctca acttcaagcc cgatcatcgt
     2461 cagcctgtcg acgatctcgg ccagggacgc gtcggtgtcg aggtgctcct tgagccaggc
     2521 cagcgtgaat ttcattgcgc ggctccgctc gcgcgttccc ttcccccttg aggcggagga
     2581 tgaggtgaag cgtggccgtg gcgtctcatg cgctcaaccc accggcgaga gtaggaaaat
     2641 caaggggtcg gaagccgtag tgggcgagcc agcgcacgtc cgcttcgaag aaggcgcgga
     2701 gatcgttcat gccgtacttg agcatggcga tacggtcgat ccccaagccc caggcaaagc
     2761 cctgatactc gtcgggatcg agcccgcaat ttcgcagcac actgggatgc accattccgc
     2821 aacccagaat ttccagccag tcgtcgcctt ccccgaagcg aatttcgccc ttgtcgcgct
     2881 tgcactgaat gtcgacttcg agcgacggct cggtgaatgg aaagtacgac ggacgaaaac
     2941 gcatcttcac gctgtcgact tcgaagaatg ccttgcagaa ctcttcaagt atccatttca
     3001 gatggcccag atgagatcct ctgtcgatga caaggccctc gacctgatga aacatcggcg
     3061 tgtgcgtttg atccgaatcg ctacgatatg tgcggcccgg acaaatgaca cggatcggcg
     3121 gcttttggct gagcatcgtc cgcacctgaa ccggtgacgt gtgcgtgcgt agcagcagtc
     3181 gtgagccatc cgatttcggc gggaaataaa aggtgtcgtg catctcccgt gccggatggc
     3241 cttcgggaaa attcagcttg gtgaaattgt agtcgtcgct ctcgatgtcg ggtccttcgg
     3301 ccaccgcaaa acccatgtcg gcaaaaatcg ccgtcagctc gtcggtgacc tggctgatcg
     3361 gatgcacgcg ccccgtttca gccggcgttt cgcgaaccgg caaagtgacg tcgatagttt
     3421 cggtgttgag tctggcatca agtgcggccg cagcaagctt gtctttcgcc tctgcaatcg
     3481 ctgcggtcag gcgatccttc aatccattga ttgccggacc ctggatcttg cgctcctcgg
     3541 gggtcatgct gccgagcgtc ttgagcagcg ccgacaccga gccgctcttg cccagcgccg
     3601 ccacgcgtac ggcttcgagc gccgcctcgt cccccgccga ggcgacggcg gcaagcagat
     3661 cctgttccag tcgcgcgatg tcggtcatgg tttcccagcg ttctagctgg tcatgggcgg
     3721 gcttgtcccg gccatccacg tcttgcttgc aacaaggaag gcgtggattc ccggcgcgag
     3781 gccgggcatg accgctttgt ttttaagccg gcaacgcggc cttggccttt tccacgatcg
     3841 cctggaaggc cgcgggctcg cgaatagcaa ggtccgacag caccttgcga tcaacggtca
     3901 acccggcttt ggcgaggccg gcgatgaagc gactgtaatt cagtccgaat ggccgcaccg
     3961 ccgcgttcag gcgctgaatc caaagcgcgc ggaatgtgcg ctttcgccgc ttgcgatcgc
     4021 ggaaggcgta ttggttcgcc ttctccaccg cctgcttggc gatgcgaatc gtatttttgc
     4081 ggcggccata ataacccttg gcggccttga ggaccttctt gtgcttggca tgcgacgtga
     4141 caccacgctt gacgcgggcc atgggaaatc tccttgcaga acgagcgaat ggttacagga
     4201 aagccgcggt cagcggcttg aagaccggtc agccgtaggg cagccagttc ttcttgacgg
     4261 tctcgccgtc ggttttgaac agcaccttcg tgccgcgatg ctcgcggatc gtcttggttg
     4321 tccgcttgat catgccgtgg cgtttgccgg tctgctggta tttcaccttg ccggacgccg
     4381 tgactttgaa acgctttttg gcgccggact tggtcttcaa tttgggcatt tggctctcct
     4441 catcggctgc gggacaagcc gcatggccga aatatgctcg taggcctttt tggcctggag
     4501 cggtgtgctc gggattgagc gttaatcgcg gccacggcag cccttactgg ccgggcagcg
     4561 atggccggcg ttatggcaga ggcggcgccg tcatgcaacc atcggccgtt cgcctttgat
     4621 tgccgagaaa atgccgatgc accgctccga cacggagcag ggcatcggct gatacaaagg
     4681 tgctttcggt cctagcgtgg cgccaaaacc atgatcattt ggcggccttc gaatttcggc
     4741 tcctgctcga cctttgcgat tggaccgaca tcgtccttca cgcggtcgag caatttggtg
     4801 cccaactcc
//
LOCUS       DATDHO010000511         3656 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_272423, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000511 DATDHO010000000
VERSION     DATDHO010000511.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3656)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3656)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3656
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272423"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..353)
                     /locus_tag="VIY07_09750"
     CDS             complement(<1..353)
                     /locus_tag="VIY07_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HEY6382074.1"
                     /translation="MNFEKFTDRARGFVQSAQSLALREGHQQFAPEHLLKVLLDDPEG
                     LAAGLIDRSGGNSRQALRAVEASLAKRPKVSGGGAGQIYLDPALARVFDAAEKAGEKA
                     GDSFVTVERLLLALAL"
     gene            518..1294
                     /locus_tag="VIY07_09755"
     CDS             518..1294
                     /locus_tag="VIY07_09755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HEY6382075.1"
                     /translation="MTSGPASIRAIYRYPVKGLSPQALAHTRLSVGEAIPADRLYAIE
                     NGPSGFDPEAPSYLPKQRFLMLMRNDRLASLRTDFDEDSHTLIIRWENREAARGDLRT
                     KEGRLAIEAFFRRFMPKESHGPPKVLFGKDGHSFSDVARKVVSMINLASVAEVESAAG
                     APVNPLRFRGNLYVAGWPAWHEFNLVGHMLTIGESTRLRVVKRIQRCAATEVDPDTGI
                     RDLPIPRTLIENFDHADCGVYAEVVTAGDIAIGDRVTIAE"
     gene            complement(1356..2000)
                     /locus_tag="VIY07_09760"
     CDS             complement(1356..2000)
                     /locus_tag="VIY07_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HEY6382076.1"
                     /translation="MTATRRATILLCLVAAAVLATSAVARPAHHRHRVAQATAVASQM
                     ITGADRDMRYSANVERTAVQSAGEYVGRSRRHVRRSIGSAYARAQSHANSAYGGPTSN
                     ALVTEARKYIGTNPTGRASLWCGAFMDMVLKRTGHRGGGNLASAYSRYGTHVSGPQVG
                     AIAVMGRRGGGHVGVVSGIDANGNPIIVSGNHNRTVAESVYPARRIHAYVLPGS"
     gene            complement(2294..2956)
                     /gene="metW"
                     /locus_tag="VIY07_09765"
     CDS             complement(2294..2956)
                     /gene="metW"
                     /locus_tag="VIY07_09765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEY6382077.1"
                     /translation="MLSRADDNLTVAGIPHTSTGARVDLVLVAEMVEQGAKVLDVGCG
                     DGELLRLLSETRGVDGRGIELSREGVNECVAKGLAVIQGDADTDLGDYPDDAFDYVIL
                     SQTLQATRHPRAVLEHMLRIGRRAIVSFPNFGHWQVRLQLLFAGHMPRTDILPFSWYD
                     TPNIHHCTIKDFRQLCTEIGVRMEKAVALNAWGSPLRLNAPWWFWNLFGEQAVFLLSR
                     KG"
     gene            complement(2990..>3656)
                     /gene="metX"
                     /locus_tag="VIY07_09770"
     CDS             complement(2990..>3656)
                     /gene="metX"
                     /locus_tag="VIY07_09770"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018830.1"
                     /note="Catalyzes the conversion of acetyl-CoA and
                     L-homoserine to CoA and O-acetyl-L-homoserine; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEY6382078.1"
                     /translation="AASYPQRVFSVLPIACSTRHSAQNIAFHEVGRQAIMADPEWRGG
                     RYLLEKTNPRRGLAVARMGAHITYLSDAALHRKFGRKFQDRENPTFSFDADFEVESYL
                     RHQGISFVERFDANSYLYLTRAMDYFDLAADYGGVLAKAFSGSPTRFCVISFTSDWLF
                     PTSDSRAIVHALNAASARVSFAEIVTDKGHDAFLLEEPELFAIVRGFLDGAGGARGLG
                     SKS"
BASE COUNT          756 a         1102 c         1086 g          712 t
ORIGIN      
        1 agcgcgagcg cgagcaacag gcgctcgaca gtcacgaaac tgtcgccggc cttctcgccg
       61 gctttttccg ccgcgtcaaa gacccgcgcc agcgccggat ccaggtagat ctggcccgcc
      121 ccgccgccgc tgaccttcgg ccgcttggca agcgacgctt ctactgcccg caacgcctgc
      181 cgcgaattgc cgcccgaacg atcaatgaga ccggctgcga gaccctctgg gtcatcgagc
      241 agtaccttga gcaggtgttc cggtgcgaat tgctggtggc cttcgcgcaa ggccaaagac
      301 tgggcggact gtacaaaccc tcgtgcgcga tcggtaaatt tctcgaaatt catatttaga
      361 ccccctcggc ccatcacggc gccggtaatc cgggccccct gaggcgaccc ggtcgaccat
      421 tatgtggggg catttatcgt agtttgaaga gccggtttgc ttgatgtagg tcaatgtcaa
      481 tgctccgcag agcggccttt aaggcgatcg aaaatcaatg acatcggggc ccgcttcaat
      541 ccgcgccata taccgttatc cggtgaaagg tctctcgcct caggcactcg cgcacacgcg
      601 gctctccgtg ggcgaggcca ttcccgccga ccgtctctat gccatcgaaa atggcccctc
      661 cggcttcgat cccgaagcac cgagctattt gcccaagcaa cgttttttga tgctgatgcg
      721 caacgatcgg cttgcctccc ttcgcactga ttttgacgag gacagccaca cattgattat
      781 ccggtgggaa aaccgcgagg cggcgcgcgg ggatttgcgc accaaagaag ggcggctggc
      841 gatcgaggcg ttcttccgcc gcttcatgcc gaaagaatcg cacgggccgc cgaaggtgct
      901 tttcggaaaa gacggccaca gcttttcgga cgtcgccagg aaggtggtgt cgatgattaa
      961 tcttgcctcg gtagcagagg tggaaagtgc ggccggcgcg ccggtcaatc cgttgcgctt
     1021 tcgcggcaat ctttatgtgg cgggctggcc cgcgtggcat gaattcaatc ttgtcgggca
     1081 catgcttacg atcggagaat ccacgcggct ccgcgtggtc aagcgcattc agcgctgtgc
     1141 cgcaaccgaa gtcgatccag atactggtat tcgcgacctt cccatccctc gcaccctcat
     1201 cgagaatttt gatcacgcgg attgcggggt ctacgccgaa gttgtgacgg caggcgacat
     1261 agccatcgga gaccgcgtta cgatcgctga ataagaaaac gccccgctcc atggagcggg
     1321 gcgccatttt gattgctttc aatgacgagg gctgctcagc tccccggcaa cacgtacgcg
     1381 tggatccgtc tggccggata aaccgattcc gcaaccgtgc gattgtggtt gccggagaca
     1441 atgatcggat tgccatttgc gtcgatgccg ctgacgacgc caacatgccc gccgccacgg
     1501 cgtcccatca cggcgatggc tccgacctgg ggtcccgaca cgtgcgtgcc gtagcgtgaa
     1561 taggcgctgg caaggtttcc gccgccccgg tgacccgtgc gcttgaggac catgtccatg
     1621 aaagcgccac accacaaact ggctcgtccg gttggattgg tgccgatgta tttgcgcgcc
     1681 tccgtgacca gcgcgttgct ggtggggcca ccataggctg agttcgcgtg cgattgcgca
     1741 cgcgcgtagg cgctgccgat ggagcgtcgg acatgccggc gagaccggcc gacatactcg
     1801 ccggcggact gcaccgctgt ccgctcgaca ttcgcggaat agcgcatgtc gcgatcggct
     1861 ccagttatca tttggctcgc aacggccgtc gcctgcgcta cccgatggcg gtgatgggcg
     1921 ggtcttgcga cagccgaggt tgcaagaaca gcagccgcca ccaaacacag caaaatcgtc
     1981 gcccgtcttg tagcagtcat caagtcagtc cccttattta tttaagcaat gcgccttcat
     2041 cggatagtcg agcagaagac gcggcgttca aacgcagttc gcatatggca atttcgtgat
     2101 cgttggaagg tcgtgtgatg ggaatgcata gctgctattc catcggaata cctttatgca
     2161 gcaaaacata cgctaaaacc ggaaggacat accttatcag gtgactaaaa tactgaatta
     2221 gtcgagatta atacttaacg gccaagaagt tcaccgccgc ggcatagatt tcagatgcgg
     2281 gacgaggcga aactcagcct ttgcggctca gcaagaacac agcttgctcg ccgaacaggt
     2341 tccagaacca ccacggggca ttgagccgta gcggagagcc ccaggcattc agagctaccg
     2401 ccttttccat ccgtacgccg atttccgtgc agagctggcg gaaatccttg atggtgcaat
     2461 ggtggatatt gggcgtgtcg taccagctga agggcaggat gtcggtgcgc ggcatatgac
     2521 ccgcgaacag gagttgcagg cgtacttgcc agtggccgaa attcggaaag gacacaatcg
     2581 ccctacgccc tatgcgaagc atgtgctcga gcaccgcgcg gggatgccgg gtcgcctgaa
     2641 gcgtttgcga caggatcacg tagtcgaacg catcgtccgg atagtcaccg agatcggtgt
     2701 cggcgtcgcc ctgaatgaca gccaggccct tcgccacgca ttcgttcacg ccctcgcgcg
     2761 ataactcgat gccacgcccg tccacgccac gggtttcgct caaaaggcgc aggagttctc
     2821 catcgccgca acccacatcg agcaccttgg ctccctgctc gaccatttcg gcgaccagca
     2881 ccaggtcgac gcgggcgcca gtggacgtgt gcgggatgcc ggcaaccgtc aggttgtcat
     2941 cggcgcggga aagcatgctc atggatccgc tcttgcattc gctcctggat tagctcttgg
     3001 agcccagacc gcgagcgccg ccggccccgt cgaggaagcc gcgtacgatc gcaaatagct
     3061 cgggttcttc gagcagaaaa gcatcatgac ccttgtcggt cacgatttcg gcaaacgaga
     3121 cgcgagcgct cgctgcattc agcgcatgca cgatggcgcg tgaatccgat gttgggaaca
     3181 gccaatcgct tgtgaaggag atcacgcaga agcgcgtcgg cgaaccgctg aaagccttgg
     3241 cgaggacgcc gccgtagtcg gccgcaagat cgaaataatc catggcccgc gtcagataga
     3301 gatacgagtt cgcatcgaac cgctcgacga acgaaatccc ctgatggcgc agataggatt
     3361 cgacctcaaa atccgcatcg aacgagaacg tcggattttc gcgatcctgg aatttgcggc
     3421 caaatttccg atgcagagcg gcatcggaca gataagtgat gtgtgcgccc atgcgcgcga
     3481 cggcgagccc gcgccgcgga tttgtctttt ccagaaggta acggccgcca cgccactcag
     3541 ggtcagccat gatcgcttgc cgtccaacct cgtggaaggc gatgttttgc gcggaatggc
     3601 gcgtcgagca ggcgatcggc aacacgctga acacgcgttg cgggtagctg gcagcc
//
LOCUS       DATDHO010000512         4332 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_272468, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000512 DATDHO010000000
VERSION     DATDHO010000512.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4332)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4332)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4332
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272468"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..273)
                     /locus_tag="VIY07_09775"
     CDS             complement(<1..273)
                     /locus_tag="VIY07_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382079.1"
                     /translation="MLFDGGYTYSTFLMNVIAIFAFVVWFWLLVVIFGDLVRRNDISG
                     WGKALWVIGLVIFSYLGILAYLITQGRGMAERNAQQAQQARDELRRV"
     gene            1570..2322
                     /locus_tag="VIY07_09780"
     CDS             1570..2322
                     /locus_tag="VIY07_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007563179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiester glycosidase family protein"
                     /protein_id="HEY6382080.1"
                     /translation="MVKNTSKLVLALFLLLIRAVSVRAESAPCQRVTYEQSEYTVCEV
                     DLRRQSVRLFWKKPDGQPYGYPSSLPRAFGNSGRLLFATNGGMYHPDNSPVGLYVEGG
                     RELVRANTSAGPGNFHMRPNGVFYVTGEIGGVVETRLFIKQRPQVDFATQSGPMLVID
                     GKVHARFARYGGSRKYRAGVGSRDPNSVVFAVSESEVSFGEFARLFRDKLRSKNALFL
                     DGGSATSFYSPALRRNSNFLPLGPIIGVYGPD"
     gene            2800..3147
                     /locus_tag="VIY07_09785"
     CDS             2800..3147
                     /locus_tag="VIY07_09785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382081.1"
                     /translation="MLTYAVVVFAIGALGGLVLASYVLRAKLAPWALSLVHAALGAIG
                     LLLVIYAALSTGISGAALTALIILAIAALGGFYLASIHLRGEIAPKAVVFVHAGVAVI
                     GFLTVLGAVVGVI"
     gene            3170..3607
                     /locus_tag="VIY07_09790"
     CDS             3170..3607
                     /locus_tag="VIY07_09790"
                     /inference="COORDINATES: protein motif:HMM:NF021505.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2231 domain-containing protein"
                     /protein_id="HEY6382082.1"
                     /translation="MRIFGHPIHPMLVHFPIVFWTVAVGAYVAGAAGLTETIDAIAKF
                     ANGAGLVMAMLAMIAGLLELRTIDSRSEAMRVATWHMLVMATVWVCFLVALVLSISPE
                     LTGSTARLAVVAFAVLGFLLMAVGGWLGGRLVYEFGIAVKYRV"
     gene            3858..>4332
                     /locus_tag="VIY07_09795"
     CDS             3858..>4332
                     /locus_tag="VIY07_09795"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004185 - serine-type carboxypeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEY6382083.1"
                     /translation="MWSRLLLFALILLPAPALAGAKEKVAALAPSGLVLVMDADGNEL
                     VAQNADKPFVPASIAKIVTAWLALEVLGADYRFQTRFYLDNKRVLYVRGGGDPFLISE
                     ELALLASRLVAAVGKEPLTGVLLDASYYPANLRIPGIEESNESYDALNSALAVNFN"
BASE COUNT          859 a         1284 c         1260 g          929 t
ORIGIN      
        1 cacgcggcgc agttcgtcgc gcgcctgctg cgcttgctgc gcgttacgct ccgccattcc
       61 tcttccctga gtgatcagat aggcgaggat tccgagatag gaaaaaatca ccagaccgat
      121 cacccaaagc gccttgcccc aaccggagat gtcgttacgt ctgaccagat cgccgaagat
      181 tacaacgagc agccagaacc aaacgacaaa tgcaaatatg gcgatcacat tcatcaaaaa
      241 ggtggaatag gtgtagcctc cgtcgaagag catcacggtc tccctgttcg atagctttca
      301 accggccaga ctcttgaccc aatgcgagct ccaatcgagt tggaccaagg gccaatggcc
      361 gaaaaatcgc gccaatccgt ttggccctca aaacatcatg gccccaaggc caaaattcta
      421 gcgagggatc ctgcgtcggg tcgcaggcga tgcggtagac gcatacagcg gaacgagtgc
      481 caaggccgcc gtcgtttccg acggcggcct tctccagagt tcagcgtctt ccggccctac
      541 aattaccgac aacgcacgcg gccccagcga tcacgccagc agcggcggca atggaggcga
      601 ccccaacggt cgcgccaaca gcgacgccac gccacgtccg tcaaaatgtt gaggtcggca
      661 agggcactca ccggtatcgg cgtgatcggc gtcgcttgcg cggttcccga cacggcggcg
      721 aaaatcaggc ccgcaactgc gattgcaagt attgtacgca acatgtgtgt ctccctgtct
      781 tccgcgcttc ttgtcgccca cgatctcggt atctgcaggc aataatgcga tggccgaaaa
      841 acaggatcga gtggaccgaa gtccaattgt tgggctgccg caggatttga gcacgtcagc
      901 gcctaccccc gccccctgct tcgatgctaa cgctgccacc gatctttacg cacatatcag
      961 agcccgcaac cttcacgaag cccgggccat attgtgcgca cggattgcca ctgacagcgg
     1021 ggtgcagtgt tttcgactta ggagggttct tacgcggctg atttggctgt tgagcaaccg
     1081 cgacccaggt cggcaaaact gcaacaacaa tcgcaaggac gatttttctc atgagctctt
     1141 ttatcgcgtc gtgcgtccct ttcctaccgg ctggaccgcc aattcggcct ttgcgatgca
     1201 ccctcgcgga tggcggcgcg ccggtcttcg accggaccac accttgcggc agtcgacaag
     1261 gcaaagcgcc gggtccatca tgcccttggc ctcacattgc caattgagga cctcatgatc
     1321 tcgtacattg tcggtcttag ggataaaacg cgttccaagg ttttaacaat tgaagccgag
     1381 gacgcgctga ttgctgccct taaggccaag caggcaaacc ccgaggccat aattacatac
     1441 gtgcgcaagt cgaatagacg tggcgaccga cgtcacccac accagggact gtccgacagg
     1501 aactgactcg gtctgtcctg gtaacgtcag catctattcg agcatgtcgt cagcgcgggc
     1561 cgttggatcg tggtgaaaaa tacttcaaaa cttgtcctgg ccctattcct tttgctcatt
     1621 cgggcggttt cggttcgcgc ggaatctgca ccctgccagc gcgtcactta tgagcaaagc
     1681 gaatacacag tgtgcgaggt ggacctgcga cgtcagtccg tcaggctgtt ctggaaaaag
     1741 ccggacggac aaccttacgg atatccttcc tcgttgccgc gcgcgttcgg taactcggga
     1801 cgccttcttt tcgcgacaaa tggtggcatg taccacccgg acaactcccc ggtcggcctg
     1861 tacgtcgagg gaggtcggga gctggtccgt gccaatacca gcgcgggtcc cggtaacttc
     1921 cacatgagac caaacggcgt gttttatgtg accggagaga tcggcggagt cgtggaaact
     1981 cgcttattca tcaaacagag gcctcaggta gacttcgcca cccagtcggg accgatgttg
     2041 gtcatagacg ggaaagtgca tgctcgtttc gctcgatatg gcggatcaag aaaatatcga
     2101 gccggtgtcg gcagccgcga tcctaactcg gtcgtgttcg ccgtctcgga atcagaagtt
     2161 tcgtttggcg agttcgcgcg tctcttccgg gataagcttc ggagcaagaa tgctctgttt
     2221 ttggacggcg gtagcgccac cagcttttat tcgcccgcac tgcggaggaa tagcaacttc
     2281 ctgccgttgg ggccaataat cggcgtatac ggaccggatt gatgcgactc ctggtacctg
     2341 cctgccacga cagtttggac gaacacccgc ggttgagatt tgcgggccgc tacctatatc
     2401 tagtcgatac gcagcgcgaa gagggaatca tggtcgataa gcagaccgag gcggataaag
     2461 ctcaagcaat gcgggaatat cgagaaaaac atgaggccgc catgcggcgt atcgctgccc
     2521 ttcgcgcggc acggctggcg cgagatgcgg ctgagtcccc tgccgaaaaa cccaaatcaa
     2581 aacggcgaag ctagacggcg cggttcggca tttaacgttg ggccgccgag ccccagcatg
     2641 cacgcacgcc accgccagac accgtgactc ctggcggccg ccagcaacga catgatcctc
     2701 gcactgtacc tgcgatttct acatggccag gggggacggg aacctttctg tcccgatcgc
     2761 atctaacggc catcaacatc ggtacggtgg aggattgcaa tgctgaccta tgccgtcgtc
     2821 gttttcgcta ttggggctct tggcggcctc gtactcgcga gttatgtcct gcgcgcgaag
     2881 cttgctccgt gggcgctgtc gctggttcac gctgctcttg gcgccatcgg gttgctgctc
     2941 gtcatttatg cggcgctctc gaccggcatc tccggtgcgg cgctgacagc gctgatcatc
     3001 ctcgcaatag cggcgctcgg cggattctac ctggcgtcca tccatttgcg tggcgagatc
     3061 gcgccgaagg ctgtcgtgtt cgttcacgcc ggcgtcgccg tcatcggatt cctgacggtg
     3121 ctcggagctg tcgtcggcgt gatctagctc aggcaagcga accgatccga tgcgaatttt
     3181 tggccaccca atccatccga tgctggttca ttttccgatt gttttttgga ccgtcgctgt
     3241 cggggcctat gttgcgggcg cggctggctt aacagaaacg atcgacgcaa tcgccaaatt
     3301 cgccaacggt gcgggattgg tcatggcaat gctggcaatg atcgccggct tgcttgagct
     3361 tcgcacaatc gacagccgca gcgaggccat gcgggtggcg acgtggcaca tgctcgtcat
     3421 ggcaacggtc tgggtctgtt ttctggttgc gctagtgttg tcaatttcac ccgaattgac
     3481 cggttcgacg gcgcggctgg ctgtcgttgc cttcgcggtg ctgggtttcc tgctgatggc
     3541 tgtcggtggc tggcttgggg ggcgattggt ttatgagttc gggatcgcgg taaagtatcg
     3601 ggtttgatcc gggcaataac cccagcgatc agagcgtcgg gccatgttct atcggttctt
     3661 gcgcggccga cgaagaagtc cccgcaagac caagtgattt gccggttttt tccttgagca
     3721 tgtaaataag atcgtattga tttgactaat cgaactcatg tgcgatgtgc gtaaccacca
     3781 aagagcgtgc ccgcgcacat caattccttt gcacgctccc gaaccggtaa ccgaatcgat
     3841 cccatgcagg agttgctatg tggtctcgcc tgctcctttt tgctctgatc ctgttgcccg
     3901 cgccggccct cgccggtgcc aaggagaagg tcgcggcgct ggctccgtcg gggctggtgc
     3961 tggtgatgga cgccgatggc aacgagttgg tggcccagaa cgctgacaag ccattcgtgc
     4021 ccgcctcgat tgccaagatc gtgactgcct ggctggcgct ggaggtcctg ggcgctgact
     4081 accgcttcca gacccgtttc tacctggata acaagcgggt gctgtacgtg cgcggcggcg
     4141 gagatccttt cctgatttcg gaagagctgg ctctcctcgc gtcccggctg gtcgccgcgg
     4201 tcggcaagga gccgctaacc ggcgtcctgc tcgacgcgag ctactacccc gccaacctcc
     4261 gcatcccggg catcgaggag agcaacgagt cctacgacgc tctgaactct gccctggcgg
     4321 tgaacttcaa ca
//
LOCUS       DATDHO010000513         2860 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_272577, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000513 DATDHO010000000
VERSION     DATDHO010000513.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272577"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(43..441)
                     /locus_tag="VIY07_09800"
     CDS             complement(43..441)
                     /locus_tag="VIY07_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008546804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly protein"
                     /protein_id="HEY6382084.1"
                     /translation="MTEDTPDPAPVAEKPPENAAVVGSPALPQDELHKLTDDIVAALK
                     TVYDPEIPADIYELGLIYKIDIGDDREVKIDMSLTSPNCPAAQDLPIMVENAVSSVPG
                     VKETKVAVVWDPPWDPSRMSDEARLVLNMW"
     gene            complement(438..1679)
                     /locus_tag="VIY07_09805"
     CDS             complement(438..1679)
                     /locus_tag="VIY07_09805"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEY6382085.1"
                     /translation="MHPAVKNGSYDVARIREDFPALALEVYGKPLVYLDNAASAQKPK
                     QVLDRLQIAYTRQYANVHRGLHYLANEATEAYENSRETVRAFLNAARKEEIIFTRNAT
                     EAINLVAYTFGRERIKAGDEIVLSIMEHHSNIVPWHFLRERQGAVIKWAPIDDDGNFL
                     LDEFEKLLTPRTKLVAITHMSNALGTVVPVKEVVHLAHARGIPVLIDGAQAAVHMDVD
                     VRDIGCDFYVFTGHKIYGPTGIGALYGKYEHLESMPPFNGGGEMIHEVFEDRITYGQP
                     PHKFEAGTPAIVQAIGLAAAIDYVNSVGKERIRSHENALLKYAHERLGQINSLRIIGN
                     APDKGPIVSFEIKGAHPHDVATIIDRSGIAVRAGTHCVMPLLARYGLTATCRASFGMY
                     NTKDEVDTLAASLVKAQEFFA"
     gene            complement(1681..>2860)
                     /gene="sufD"
                     /locus_tag="VIY07_09810"
     CDS             complement(1681..>2860)
                     /gene="sufD"
                     /locus_tag="VIY07_09810"
                     /inference="COORDINATES: protein motif:HMM:TIGR01981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEY6382086.1"
                     /translation="FHRFDAHGLPHRRVEEWKYTDLRALMREAKPLAEPAARTGVVTG
                     LAGVEAGRVAIVNGRYEPGWSNFNARDAGVTLSELFAFAAEEKTYRLGDVPGKDDIAF
                     WLNTAFMTGGVALRVKKNARQPVHIAHVFAGNSAAAMYPRCVVIVEPGAQLTLIESFE
                     GPASLDYQVNSVLELVIGDQARVDHIKIGSDGEAALRLSTLGVTVGAKSAYNDFVFTT
                     GGGIVRNQTFVRFSGEGTDASIGGATLARNRQHVDNTLVIEHAAGGCTSRERFRSVLD
                     GQSHGIFQGKIIVNPHAQKTDAKMASHALLLSDEAEADNKPELEIFADDVQCGHGATA
                     GALDSALKFYLMSRGIPEKQAEALLIQAFIGEAIEEIAHEGIREAIMQSAINWLGARG
                     "
BASE COUNT          556 a          872 c          816 g          616 t
ORIGIN      
        1 ctgtcaaagc cttatctgtt gtctcatcgg tcgagttgca actcaccaca tattcaatac
       61 gagtcgcgcc tcgtccgaca tcctgctcgg atcccacggc ggatcccaca cgacggcaac
      121 cttggtttct ttcacccccg gaacgctcga taccgcgttt tccaccatga ttggcaaatc
      181 ctgcgcggcg gggcagtttg gagatgtgag cgacatgtcg attttcactt cccgatcatc
      241 cccgatgtcg attttataga tgaggccgag ctcatagata tcggctggaa tttccgggtc
      301 atagacagtt ttgagcgctg cgacgatgtc atcggtcagc ttgtgcagct cgtcctgcgg
      361 cagggccggc gagccgacga cagcggcatt ttccggcggc ttttccgcaa ctggcgctgg
      421 atcgggcgtg tcttcagtca tgcaaagaat tcctgcgcct tgacgagaga agcagcgagc
      481 gtatccacct cgtccttcgt gttgtacatg ccaaaggaag cacggcacgt ggccgtcaat
      541 ccataacgcg cgagcagagg catgacgcag tgcgtgcccg cgcgcaccgc gattcccgaa
      601 cgatcgataa tcgtggcgac gtcgtgcgga tgcgcgcctt ttatctcgaa agacacaata
      661 ggtcccttgt cgggggcgtt accaataatg cgcagggagt tgatctggcc gaggcgttcg
      721 tgagcgtatt tgagtaaagc gttctcgtgg cttcgaatgc gctccttgcc caccgagttg
      781 acgtagtcga tcgccgcagc aaggccaatg gcctgaacaa tcgccggcgt gcctgcttcg
      841 aatttgtgcg gaggctgccc gtaagtgatg cgatcctcga acacttcgtg aatcatctcg
      901 ccgccaccat tgaatggcgg catcgattcg aggtgctcat acttgccgta gagcgcaccg
      961 ataccggtag gcccgtaaat cttgtgaccg gtaaaaacat aaaaatcgca gccgatgtcg
     1021 cgaacgtcca catccatgtg cacagcggcc tgcgcgccat cgatgagcac cggaatgccg
     1081 cgcgcgtgcg caagatgcac gacctctttt accggcacga ccgtccccaa cgcattcgac
     1141 atatgggtga tggccaccaa cttggtccgg ggcgtcagga gtttctcgaa ttcgtcgagc
     1201 aggaaattcc cgtcatcatc gattggcgcc catttgatca cggcgccctg gcgttcgcgc
     1261 aggaaatgcc acggcacgat attggagtgg tgctccatga tggaaagcac gatttcatcg
     1321 cccgccttga tccgctctcg cccgaaagta taggccacga gattgatcgc ttcggtggca
     1381 ttgcgcgtga aaatgatctc ttccttgcgg gctgcgttca ggaatgcccg taccgtctcg
     1441 cggctattct cgtaggcctc cgttgcctcg ttagcgaggt agtgcaggcc gcgatgcacg
     1501 ttcgcgtatt gtcgagtgta cgcaatctgt agccgatcga ggacctgctt cggcttctgc
     1561 gcggaggcgg cattatcgag gtagaccagg ggcttgccat aaacttcaag cgccaacgca
     1621 ggaaaatcct cgcgaatgcg ggccacatcg taggagccgt ttttgacggc cgggtgcatg
     1681 ttatcccctc gcacccagcc aattgatggc agattgcatg atcgcttcgc ggatgccttc
     1741 gtgcgcgatc tcctcgatcg cttcgccgat aaacgcctgg atcagcaagg cttcagcctg
     1801 cttttcaggg atgccgcgcg acatcaggta gaacttgagc gcgctgtcta gcgcgccggc
     1861 agtggcgccg tggccgcatt gcacgtcgtc ggcaaaaatt tccagctccg gcttgttgtc
     1921 cgcctctgcc tcgtcggaca acagcagcgc atgactggcc attttggcat ctgttttctg
     1981 agcatgcgga ttgacgatga tcttgccctg aaagatgccg tggctctggc catcgagcac
     2041 cgatctgaag cgttcgcggc ttgtgcagcc gcccgctgcg tgctcgatca ccagcgtgtt
     2101 gtccacgtgc tggcgatttc gcgcgagggt ggcgccgccg atcgacgcgt cggtcccctc
     2161 gccactgaac cgcacgaaag tctggttgcg cacaatcccg ccgccggtag tgaacacgaa
     2221 atcgttatag gccgatttgg cgccgaccgt gacgccgagc gtcgagagcc gtagcgccgc
     2281 ctcgccatca ctgccgattt ttatgtggtc gacccgcgcc tggtccccga tgacgagctc
     2341 aaggacggag ttgacctggt agtcgaggct tgccggccct tcaaaactct cgatcagcgt
     2401 cagctgcgca cctggttcga cgatcaccac gcagcgcgga tacatcgctg ccgcggaatt
     2461 gcctgcgaac acatgggcga tatgcacggg ctgacgcgca ttctttttca cgcgcaacgc
     2521 gacaccgccg gtcatgaaag cggtgttcaa ccagaatgca atatcgtctt tgcccgggac
     2581 gtctccgaga cgataagtct tctcctcggc cgcaaaggcg aaaagctcgc taagcgtgac
     2641 gcccgcatcc ctcgcgttga aattgctcca acccggctcg taacgtccgt tgacaatggc
     2701 gactcgacca gcctcgacac cagcgagccc cgtcaccacc cctgttcgcg cagcaggttc
     2761 cgccaacggc ttggcttcgc gcatgagcgc gcgcaaatca gtgtatttcc attcctcgac
     2821 ccgccgatgc ggcaagccat gcgcgtcaaa gcggtggaag
//
LOCUS       DATDHO010000514         3203 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_124205, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000514 DATDHO010000000
VERSION     DATDHO010000514.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3203)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3203)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3203
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124205"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1187)
                     /locus_tag="VIY07_09815"
     CDS             complement(<1..1187)
                     /locus_tag="VIY07_09815"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEY6382087.1"
                     /translation="MTAFRTLDQVDVKGKRVLLRVDLNVPVENGVVTDATRIKRAAPG
                     ITEIADKGGKVILLSHFGRPKSRDPKQSLKHVAAEVARLIKRPVAFADDCIGEVAERA
                     VEAMKPGDILCLENTRFHPGEEKNDPAFVAALSKLGDIWVNDAFSAAHRAHASTEGLG
                     HKLSAYAGRTMQAELEAIRRALEHPERPLAAIVGGAKISTKLDLLGNLLEKVNVLIIG
                     GAMANTFLLAQGKKIGKSLAEPDLLTTAREIMTKAAAAKREIVLPVDVVVAEKFAAHV
                     PTRVIDVDHVNAADMILDIGPRTIERVVSVLARAKTLVWNGPFGAFEMEPFDNGTVEV
                     AEAAAELTEAGKLVSVAGGGDTAAALNVAGVFDRLTYVSTAGGAFLEWLEGKTLPGVE
                     VLRV"
     gene            complement(1208..2215)
                     /gene="gap"
                     /locus_tag="VIY07_09820"
     CDS             complement(1208..2215)
                     /gene="gap"
                     /locus_tag="VIY07_09820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEY6382088.1"
                     /translation="MTVRVAINGFGRIGRNILRAIAEADRKDIQVVAVNDLGPVETNA
                     HLLRYDSVHGRFPGQVTVKGDTISVGNGAIKVIAERDPSKLPWKDLGIDIALECTGLF
                     TAKDKASAHLTAGAKRVLISAPADGADFTVVFGVNHDKLTKDHKVVSNGSCTTNCLAP
                     VAKVLNDAVGIETGFMTTIHAYTGDQPTLDTLHKDLYRARAAALSMIPTSTGAAKAIG
                     LVLPELNGKLDGVAIRVPTPNVSVIDLKIVAKKQTTKEEINDAVKRASEQQLKGILAY
                     TNDPNVSIDFNHDPHSSTFHMDQTKVVNGTLVRVMAWYDNEWGFSNRMADTAVAMGKL
                     L"
     gene            complement(2279..>3203)
                     /locus_tag="VIY07_09825"
     CDS             complement(2279..>3203)
                     /locus_tag="VIY07_09825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transketolase family protein"
                     /protein_id="HEY6382089.1"
                     /translation="ASEFALEGLIPAIPEMIGGSADLTGSNNTRIKGMKTITAADFSG
                     RFIHYGVREHGMAGAMNGLALHGGIIPYSGTFLVFSDYCRPAIRLAALMGLRVIHVMT
                     HDSIGLGEDGPTHQPIEHLAALRAIPNLLVFRPCDAVETAECWQLALEATGRPSILAL
                     TRQNLPQLRNRFDEENVCSRGAYEIAAPDGRADVAIFATGSEVAVAVEAARLLASRGI
                     AARVVSVPCFELFLEQKEEYRRALIGDERVKVGVEAAVRQGWDAIIGSDGSFVGMTSF
                     GASAPYKELYKKFGITGEGVAHAALAKLGKM"
BASE COUNT          628 a          968 c          946 g          661 t
ORIGIN      
        1 acccgcaaca cctcgactcc cggcaaggtc ttgccctcga gccactccag gaacgcgccg
       61 ccggcggttg agacataagt gagccggtca aatacaccag ccacattcag tgcggccgcc
      121 gtatcgccgc cacccgctac cgaaacaagc ttgccggctt cagtcagttc cgcagcggct
      181 tcggcgactt ccaccgtgcc gttatcgaac ggttccatct cgaaagcgcc gaagggacca
      241 ttccacacca aagtcttcgc tcgggccagt acggaaacaa cccgttcgat ggtgcggggg
      301 ccgatgtcca gaatcatgtc ggccgcgttg acatgatcga cgtcgatgac gcgggtagga
      361 acatgcgccg cgaatttttc agccacaaca acatcaacgg gaagcacgat ttcacgcttt
      421 gccgctgcag cctttgtcat gatctcgcgc gcagtggtca gaagatcggg ttcggcaagt
      481 gatttgccaa ttttctttcc ttgcgccagc aggaacgtat tggccatggc gccgccgatg
      541 atcaggacgt tcaccttttc gagcagattg ccaagcagat cgagcttggt agaaatcttc
      601 gccccgccga caattgcggc caatggccgc tcgggatgct caagcgccct tctgattgct
      661 tcaagctccg cctgcatcgt ccgtccggca taggcggaca gcttgtgacc aagtccttcg
      721 gtggatgcat gcgcgcggtg cgcagccgag aaggcatcgt tcacccagat atcgccgagc
      781 tttgacagcg cagcgacaaa ggccggatcg ttcttctctt cgccggggtg aaagcgcgtg
      841 ttctcgaggc aaagaatgtc gccgggtttc atcgcttcga ccgcgcgttc cgccacctcg
      901 ccaatgcaat catccgcaaa cgcgacaggg cgcttgatga ggcgggccac ctcggcggcg
      961 acgtgcttta atgactgctt gggatcgcgg ctttttggcc ggccgaaatg cgaaagcaga
     1021 atgactttgc cgcctttgtc ggcaatctcg gtgatgccag gcgccgcgcg cttgatgcgc
     1081 gttgcgtcgg tgaccacgcc attctcaacg gggacgttca gatcgacgcg aaggagaaca
     1141 cgctttccct tcacgtcgac ctggtcgagc gtgcgaaaag cggtcatggc cggactacat
     1201 tcgaccgtta aagaagcttg cccatcgcca cggccgtatc cgccatgcgg ttcgagaagc
     1261 cccactcatt gtcataccac gccatcacac gcaccagcgt gccgttcacc accttggtct
     1321 gatccatgtg gaacgtggac gaatgcggat catggttgaa gtcgatcgag acattggggt
     1381 cattggtgta ggcaagaatg cccttgagct gctgctcgga ggcgcgcttc acagcatcgt
     1441 tgatctcttc cttcgtcgtt tgcttttttg caacgatctt gagatcaatc accgaaacat
     1501 tcggggtcgg cacgcgaata gcgacgccgt cgagcttgcc gttgagttcc ggtaatacga
     1561 gaccaatcgc ctttgcggcg cccgttgaag tcgggatcat cgaaagcgcg gccgcgcgcg
     1621 cgcgatagag atccttatgc agggtgtcga gtgtcggctg atcgccggta taggcgtgga
     1681 tagttgtcat gaagcccgtt tcgatgccga ctgcatcgtt cagcaccttg gccacgggcg
     1741 ccaggcagtt cgtagtgcag gagccgtttg aaacgacctt atgatccttg gtcagcttgt
     1801 cgtggttgac accgaagacc acggtgaaat ctgcgccgtc tgccggggct gagatgagga
     1861 cgcgcttggc gccggcggtc aaatgtgccg aggccttgtc ttttgccgta aacaaaccgg
     1921 tgcattcgag cgcgatatcg atgccgagat ctttccacgg cagtttcgac gggtcacgtt
     1981 ccgcgatcac cttgatggcg ccattgccaa cactgatcgt atctcctttc acagtgactt
     2041 ggccggggaa gcggccgtgc acgctgtcat aacgaagcag atgtgcattg gtctcgaccg
     2101 gaccgagatc gttgacggct acgacttgga tgtccttgcg gtcggcttcg gcaatggcgc
     2161 gcagaatgtt gcggccgatg cggccgaaac cgttaatggc aacgcgtact gtcatgaaca
     2221 tcactcccgg ctatttcagt gcgccgcgac gcgaatctgc gacatatata gtctttggtt
     2281 acatcttccc aagcttggcc aacgccgcgt gggcgacccc ttcgcctgta atcccgaact
     2341 tcttgtacag ttccttgtag ggcgcgcttg ccccgaaaga agtcatgccg acgaaactgc
     2401 catcggaacc gatgattgcg tcccagccct ggcgcacagc cgcttcgaca ccaaccttga
     2461 cccgctcgtc gccgatcagg gcgcggcggt attcctcttt ctgttccagg aacaattcaa
     2521 agcaggggac tgaaaccacg cgcgccgcga tgcctcgcga ggccagcaat ctcgccgcct
     2581 cgaccgcgac agcgacttca gaaccggtcg cgaagatcgc aacgtccgcg cggccatccg
     2641 gtgccgcgat ctcgtaggcg ccgcgcgagc agacattttc ttcgtcaaac cggttgcgaa
     2701 gctgtggcag gttctgtcgg gtgagcgcga ggatgcttgg cctcccggtt gcctcgaggg
     2761 cgagctgcca gcactcggcg gtttccaccg cgtcgcacgg acggaaaacg agcagattcg
     2821 gaatcgcgcg caatgcggcc agatgctcga tcggctgatg cgtggggccg tcttcgccga
     2881 gcccgatcga atcgtgggtc atgacatgga tcacgcgcag gcccatcagc gcggcaagcc
     2941 ggatcgccgg ccggcagtag tcggagaaaa ccaggaatgt gccggagtaa ggaatgattc
     3001 cgccgtgcaa cgccagacca ttcatcgcgc ctgccattcc gtgctcgcgg acaccgtaat
     3061 ggatgaagcg gccggagaag tcggcggcgg tgatcgtctt catccccttg attcgcgtgt
     3121 tgttcgagcc cgtgagatcg gctgagcccc cgatcatttc cggaattgcg gggatcaggc
     3181 cctcgagcgc aaattcggat gcc
//
LOCUS       DATDHO010000515         2852 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_466723, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000515 DATDHO010000000
VERSION     DATDHO010000515.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_466723"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VIY07_09830"
     CDS             complement(<1..296)
                     /locus_tag="VIY07_09830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH938/NDUFAF3 family protein"
                     /protein_id="HEY6382090.1"
                     /translation="MALGGRADAPHLPRPAPIDAYGDGGFRFGGMSHRGSLLCFPDGI
                     WAWPVPDVTHLTEAALSPAFERAADLDFFLLGVGRNPWILPEDVRRKFREYALSV"
     gene            complement(297..1184)
                     /gene="secF"
                     /locus_tag="VIY07_09835"
     CDS             complement(297..1184)
                     /gene="secF"
                     /locus_tag="VIY07_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEY6382091.1"
                     /translation="MRFRRISFPLSALLSILAISLYFFHGLNFGIDFKGGMLIEVQSK
                     TGPADLAKMRSALSALGLGEVQLQQFGAPNDVLIRIAEQPGGEVAQQQAVAKVRGALG
                     NEVEYRRVEVVGPRVSGELLSYGVVGLMLAIFAILIYLWFRFEWQFALGAMIANVHDI
                     VLTIGFMSITQVDFDLTSIAALLTILGYSLNDTVVIYDRIREMLRRYRKMPMPDLLNA
                     SVNQTLSRSVITHVTVSLALFALLLFGGQAIHSFTATMMFGVVLVGTYTSVFIASPIL
                     IYLGVGTGRDALTAPDRKK"
     gene            complement(1241..2845)
                     /gene="secD"
                     /locus_tag="VIY07_09840"
     CDS             complement(1241..2845)
                     /gene="secD"
                     /locus_tag="VIY07_09840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEY6382092.1"
                     /translation="MLYFTRWKAATILLTALVICLFAVPNFLPEKMVQSWPKWAQRHV
                     VLGLDLQGGSHILLEVDSNAVRKEKLEVLRDDVRRVLRDARVGYTGLVVRGNSVEVRI
                     REGSNFDQALEKLRELSQPLGGLLGAGSGQRSLDISTEAGSLVRLTLTEPAITERIRQ
                     SVEQSIQIIERRVNELGTVEPLIQRQGIDRILVQVPGLQDPTRLKELLGKTAKLDFRM
                     VDVSIPAEQAGQGRIPPDSEILYSSTQPRTPYLVEKRILVSGADLTDAQPGFDQRTSE
                     PIVSFRFNTSGARKFAQVTQENVGKPFAIILDNQVISAPVIREPILGGSGQISGSFTV
                     ESANDLAILLRAGALPAPLTIIEERTVGPGLGQDSIAKGKLSSYVGAAMVVAFMFATY
                     GLFGLFANIAVAINVAMIFGILSLLNATLTLPGIAGVVLTVGIAVDSNVLIYERIREE
                     VRAGRTPINAIDAGFTRALATILDSNITTFIAAAVLFYIGTGPVRGFAVTLGIGILTT
                     VFTAFTLTRLIVAYWVRWRRPQRVPI"
BASE COUNT          620 a          878 c          863 g          491 t
ORIGIN      
        1 acagacagcg cgtattcgcg gaatttcctg cgtacatctt ccggcagaat ccatggattc
       61 cgcccgaccc ctaataggaa gaaatcaaga tcggcggccc gctcaaaggc aggtgagagc
      121 gccgcttccg tgagatgggt cacatcaggc accggccagg cccagattcc gtccggaaag
      181 caaagcaggg agccgcggtg cgacatcccg ccgaagcgaa atcccccgtc accgtaagcg
      241 tctatcggcg ccgggcgcgg cagatgcggg gcatcggcgc ggccgccgag cgccattcat
      301 ttcttccggt ctggcgcggt gagtgcgtcg cggccggtac cgacgccaag ataaatcagg
      361 atcggcgacg cgatgaacac ggacgtatag gtcccgacca ggacgacgcc gaacatcatc
      421 gtggcggtaa agctatgaat tgcctgcccg ccgaacagca acaaagcaaa tagcgcgagg
      481 gacacggtga cgtgcgtgat caccgaccgc gagagcgtct gattgaccga agcgttgagc
      541 aaatccggca tcggcatctt gcgatatcgg cgaagcattt cccgaatgcg gtcgtaaatg
      601 acgacagtgt cattgagcga ataacccaga atcgtcagca acgccgcgat gctcgtgagg
      661 tcaaagtcaa cttgcgttat cgacataaaa ccgatggtga gcacgatgtc gtgcacgttt
      721 gcgatcatcg cgccgagcgc aaactgccat tcgaaccgaa accagagata aatcaggatc
      781 gcgaagatcg cgagcatcag gccgaccacc ccgtacgaca gcaactcgcc ggacacgcgc
      841 ggaccgacca cttccacgcg ccggtattcg acctcattgc ccagcgcacc gcgaaccttg
      901 gcgacggcct gttgctgggc cacctcgccg ccgggttgct cggcgatgcg gatgagcaca
      961 tcgttcggcg cgccgaactg ctgcaattgc acttcgccaa gccccagcgc gctgagcgcg
     1021 gaacgcattt ttgcaaggtc cgcagggccg gttttcgact gcacctcgat gagcatgccg
     1081 cccttgaaat cgatgccgaa attcaggcca tggaagaaat aaagcgatat cgccaggatc
     1141 gacagcagcg ccgacagggg aaaactgatg cgccgaaagc gcatgaagtc gaacttggtg
     1201 tcatcgggga cgatgcggag cagacgcacg gcacggttcc tcagatgggc acgcgttgcg
     1261 ggcgccgcca gcgcacccag taggcaacga tcagccgtgt cagcgtgaat gcggtgaaaa
     1321 cggtcgtgag aatgccaatt cccagcgtaa cggcaaagcc tcgcacaggc ccggtgccaa
     1381 tgtagaacag cacggcggcc gcaatgaagg ttgtgatgtt cgaatcgaga atcgtggcga
     1441 gtgcccgggt gaagcccgca tcgatcgcat tgatcggcgt tcgtccggcg cgcacttctt
     1501 cccggatgcg ctcgtaaatc agcacgttgg aatcgactgc tatgccgacg gtgagcacga
     1561 cgcccgcgat gcccggcaga gtaagggtcg cattgagcag cgacaatatg ccgaagatca
     1621 tcgccacgtt gatcgccacc gcaatgttcg cgaacagccc gaacagtccg tacgtcgcga
     1681 acatgaaggc gaccaccatc gccgccccca cataggacga aagcttgccc ttggcgatcg
     1741 agtcctgacc caggccaggg ccgacggtgc gttcctcgat gatggtcagc ggcgccggca
     1801 aggcgcccgc gcggaggagg atcgcgaggt cgtttgcgct ctcgaccgtg aaactgcctg
     1861 aaatctgccc cgagccgccg agaataggct ctcgaatgac cggcgccgat atgacctggt
     1921 tgtcgagaat gatggcgaac ggtttgccga cattctcctg cgtaacctgc gcgaacttgc
     1981 gcgcgcccga ggtattgaag cggaaagaaa caatcggctc gctggtgcgc tgatcgaaac
     2041 cgggctgggc gtcggtgaga tccgcgcccg ataccaggat tcgcttctcg acgagatacg
     2101 gggttcttgg ctgcgtcgag ctgtaaagaa tctcagagtc aggcggtatg cgcccttgcc
     2161 ccgcctgttc ggcgggaatc gaaacgtcga ccatgcggaa atcgagcttg gcggtcttgc
     2221 cgagcaattc tttcagccgg gtcggatcct gcaggccggg cacctgcaca agtatccgat
     2281 cgatcccctg gcgttggatc agcggctcga ccgtgccgag ctcgttcacc cggcgctcga
     2341 tgatctgtat cgactgctcg accgactgcc gtatacgctc cgtaatggca ggctcggtca
     2401 gcgtcagccg caccagactg cccgcttccg tcgatatgtc gagactgcgc tggccactgc
     2461 cggcgccgag aaggccgcca agcggctgcg acagctcgcg cagtttttcc aacgcctggt
     2521 cgaaattgct gccctcacga atgcgcactt cgacgctgtt gccgcgcacg acgaggcctg
     2581 tatagccgac gcgtgcgtcg cgcagaaccc gacgcacgtc gtcgcgcaac acctcgagct
     2641 tctccttgcg aacggcattg ctgtcgactt cgagcagaat gtgcgatccg ccctgcagat
     2701 cgagacccag gaccacatgc cgttgcgccc acttgggcca gctctgcacc attttttcgg
     2761 gcaggaaatt agggacagcg aacaggcata tgacgagcgc cgtcagcaaa atagtcgccg
     2821 ccttccaccg cgtgaaatag agcatgacgt tc
//
LOCUS       DATDHO010000516         6159 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_70381, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000516 DATDHO010000000
VERSION     DATDHO010000516.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6159
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_70381"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            12..572
                     /locus_tag="VIY07_09845"
     CDS             12..572
                     /locus_tag="VIY07_09845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H-like domain-containing protein"
                     /protein_id="HEY6382093.1"
                     /translation="MAIDTEAMGLDPHRDRLCVVQLSPGDGSADVVQIAPGQRKAPNI
                     ERLLSDKSILKIFHFARFDLGILAKTFGVMAAPVYCTKIASRLARTYTDKHGLKDLAR
                     EVLGIDLSKQQQLSDWGADELNDAQVSYAATDVLHLHALKEKLDGMLAREGRADLASA
                     CFRFLPDRARLDLAGWAAEDIFSHSA"
     gene            715..1422
                     /gene="lptC"
                     /locus_tag="VIY07_09850"
     CDS             715..1422
                     /gene="lptC"
                     /locus_tag="VIY07_09850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEY6382094.1"
                     /translation="MSRVITARSDPEATRAYWTLSRRDADRAFRAARRHSRLVRILRI
                     TVPVTVVIGLIIVTLITYFNPLRMLAKLPINIDNLVVSGTKVTMEQPRLAGFTSDARA
                     YELTADTAAQDMTRPDIVELRNIRAKVEMQDKTSMEMTAVSGIYDAKGETLKLDREIL
                     LRSSTGYQGRLSEALIDIRKGNVVSEHPVEVKMLQGTLNANRLDILDSGDLVRFHGGV
                     VMDMMLNQSPPAKPDTQ"
     gene            1419..2084
                     /locus_tag="VIY07_09855"
     CDS             1419..2084
                     /locus_tag="VIY07_09855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HEY6382095.1"
                     /translation="MIDMRKPLTLLLFAVALIIPSASPRAQTASQGPPNALQGFSQNR
                     DQPVHIEAATLEVRDKQKEATFSGDVRVKQGDTGMRCKSLVVFYEQGSEGNAKAKTMQ
                     AAAPGPGGEQRIKRLEARGGVVVTQKDQTVTGELGVFDMKTNTVTMTGSPVVMTQGPN
                     VLKGEKLVVDLTSGISRVESGKNGQGRVQGLFQPGSGGPGADSKTGGGGTQAPRPIPT
                     RPF"
     gene            2136..3110
                     /gene="lptB"
                     /locus_tag="VIY07_09860"
     CDS             2136..3110
                     /gene="lptB"
                     /locus_tag="VIY07_09860"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018267318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEY6382096.1"
                     /translation="MSRARHLWPYRKTMFKQLELMRRELANIVSQLWRRPSKARRSLS
                     PADARAHQGAHSRPLQRAYVDQNQAAAQPRRGSDGRQAVRPAYLAAHGVEKSFAGRMV
                     VRGVTLYVRRGEAVGLLGPNGAGKTTVFYMITGLISADRGHIELDGFDVTTLPMYQRA
                     RLGIGYLPQEASIFRGLNVEDNIRSVLEVVEPDRRRREADLNALLEEFNIARVRKTPT
                     IALSGGERRRVEIARALATRPSYMLLDEPFAGIDPIAVGDIQALVRHLTNRGIGVLIT
                     DHNVRETLGLTDRAYIIYSGEVLMEGRADDIVNNPDVRRLYLGEEFRL"
     gene            3220..4746
                     /gene="rpoN"
                     /locus_tag="VIY07_09865"
     CDS             3220..4746
                     /gene="rpoN"
                     /locus_tag="VIY07_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEY6382097.1"
                     /translation="MALSQRLEFRQTQGLVMTPQLMQAIKLLQLSSFDLAAYVEGELE
                     RNPLLERPNDEESPAPNAETNGPPPENADDGPANSDWMGAALETSRSSMEQGLGTELE
                     NVFPDDGGEKIPQSGENAAPAYSEWSGATSGGVEDYNLEAFVSVETTLADHLAEQMAL
                     AISSPAGRMIGQYLIDMVDEAGYLTGDLEAVVDKLGARRSDVELVLAVLQTFDPPGVC
                     ARNLTECLAIQLKERDRYDPAMKTLVEHLALLAKRDLSALRRLCGVNDEDLSDMIAEI
                     RTLNPKPGLAFGSTMVQPIVPDVFVRAAPDGTWQVELNSDTLPKVLINQRYYAQVSES
                     SRSDKEKAYIADCMQTATWLVRALDQRAKTILKVSSEIVRQQDGFFANGVQHLRPLNL
                     KTVADAIGMHESTVSRVTANKYMATSRGIFELKYFFTSAIAAADGGEAHSAEAVRHRI
                     RQMIDDESAEHVLSDDTIVEKLREAGIDIARRTVAKYREAMRIPSSVQRRREKLTASS
                     "
     gene            4846..5133
                     /gene="raiA"
                     /locus_tag="VIY07_09870"
                     /pseudo
     CDS             4846..5133
                     /gene="raiA"
                     /locus_tag="VIY07_09870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645055.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
     gene            5301..5765
                     /gene="ptsN"
                     /locus_tag="VIY07_09875"
     CDS             5301..5765
                     /gene="ptsN"
                     /locus_tag="VIY07_09875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HEY6382098.1"
                     /translation="MTLTDLVAPNAVIPALKVNNKKQAIQELAARAAELTGQNEKAIL
                     EILLQREKLGSTAVGNGVAIPHGKLTKLGRLFGLFARLHKSIDFEALDNQPVDLIFLL
                     LAPEAAGADHLKALARVARQLRDPEIARRLRESSDADALYAVLAMPPASSAA"
     gene            complement(5910..6140)
                     /locus_tag="VIY07_09880"
     CDS             complement(5910..6140)
                     /locus_tag="VIY07_09880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1150 domain-containing protein"
                     /protein_id="HEY6382099.1"
                     /translation="MTQEALAQLGDGRLAYVKTIRSEDVATLFPQAPKIAPGLKLFSL
                     HAADGTPIMLTDTREAALANAWSQELEPVSVH"
BASE COUNT         1318 a         1786 c         1865 g         1190 t
ORIGIN      
        1 acaagggcgc ggtggcaatc gacacggaag cgatgggcct cgaccctcat cgcgatcggc
       61 tttgcgtcgt gcaactgtcg cctggagatg gctctgcgga cgtggtgcag atcgcccccg
      121 ggcaacggaa ggcgcccaat atcgagcggc tgctgtcgga caaatcgatc ctcaagatct
      181 ttcatttcgc gcgcttcgat ttggggatac tggcaaaaac attcggcgtc atggcggcgc
      241 cggtctactg caccaagatc gcgtcgcgcc tcgcccgcac ctatactgac aagcatggat
      301 tgaaggatct ggcgcgcgag gtgcttggca tcgatctgtc aaagcagcag caattgtccg
      361 actggggtgc cgatgaattg aacgacgcgc aagtgtcgta cgcggcaacc gacgtcctgc
      421 acctgcatgc gctgaaagag aagctggacg gaatgctggc gcgcgaaggt cgcgccgatc
      481 tggcctcggc ctgtttccgc tttttgcccg accgggcgcg gctcgatctc gccggctggg
      541 cggccgaaga cattttttcg cactctgctt aagttattga gtagtcaccg ctattgttaa
      601 ctctggacga tcgcgttgcc gtgtcggggc catattcggt cggcatcttg cggcccgggg
      661 cgggacgatg acttccggca gttgttttaa ccagaaccgg gcgcggggct tgggatgagc
      721 cgtgtgatca cagccaggag cgatccagaa gcgacgcgcg cttattggac cctgagtcgg
      781 cgcgatgccg atcgggcctt tcgtgctgcg cggagacaca gccgtctggt tcgcatcctg
      841 cgcatcacgg ttcccgtgac cgtggtgatc gggctgatca ttgttacgct gatcacctac
      901 ttcaatccgc ttcgcatgct tgccaagctt ccaatcaaca tcgacaacct tgtcgtatcg
      961 ggcaccaagg tcacgatgga acagccgcgg ctggccgggt ttacgagcga tgcgcgcgct
     1021 tatgagttga cggccgacac cgcagcacag gacatgacca ggcccgacat tgtcgagttg
     1081 cgcaatattc gcgccaaggt cgaaatgcag gacaagacgt cgatggaaat gaccgcggtc
     1141 agcggcatct atgatgccaa gggcgaaacg ctaaaacttg atagggaaat cctgctgaga
     1201 tcgtccaccg gctaccaggg gcgcttgagc gaggcgctta tcgacattcg caaaggcaat
     1261 gtcgtgtccg aacatcctgt cgaagtgaaa atgctgcaag gcacgctcaa tgccaaccgg
     1321 ctggacattc ttgattcagg agacctggtt cgttttcacg gcggcgtggt catggacatg
     1381 atgctcaacc agtcaccgcc ggcaaagccc gacacgcaat gatcgatatg cggaaaccgc
     1441 tcaccttgtt gctgttcgca gttgcgctga tcattcccag cgcgagcccg cgcgcgcaga
     1501 cggcaagtca gggaccacca aatgcattgc agggcttttc gcagaatcgc gatcagccgg
     1561 tccatatcga agcagcgact ttggaggttc gcgacaagca aaaggaggcg actttcagcg
     1621 gtgacgtccg cgtgaagcag ggtgacacgg gcatgcgctg caaatcgctc gtggtcttct
     1681 acgagcaggg ctctgaaggc aatgccaagg ccaagacgat gcaagcggcc gcgcctggcc
     1741 ccggtggcga gcagcgcatc aaaagattgg aagcgcgcgg tggcgtcgtg gtcacgcaga
     1801 aagatcagac cgtcacaggg gaactggggg tcttcgacat gaaaaccaat acggtcacga
     1861 tgacgggcag tccggtggtc atgacgcagg gcccgaatgt attgaagggt gagaagctgg
     1921 tggtcgatct gacaagcggg atatcgcggg tggaatcggg caaaaatggc caaggtcggg
     1981 tgcagggact atttcaacct ggcagcggcg gacccggggc tgattccaaa accggcgggg
     2041 gcggcaccca agccccacgg cctattccca cgcggccgtt ttgagccggt atcgtcgtcg
     2101 gccgtcggcc cactcagcac ttcgggaatc gggtaatgtc ccgcgcgcga catttgtggc
     2161 cctacagaaa gaccatgttc aagcagcttg agctcatgcg acgcgagctg gcgaatatcg
     2221 tttcgcaact ctggcggcgt ccaagcaaag ctcgccgaag tctgagccca gccgacgcgc
     2281 gcgcgcacca gggggcccat tctcggccgt tgcagcgtgc ttatgttgat caaaatcagg
     2341 cagccgcgca gccgcgccgg ggcagcgacg gacggcaggc agtgcgtccc gcatatcttg
     2401 ctgcccatgg tgtggaaaaa agctttgccg gccgtatggt ggtccgaggc gtgacgcttt
     2461 acgtgcgtcg gggcgaagca gtcggattgc tcggcccgaa tggcgccggc aaaaccacgg
     2521 tcttctacat gatcaccggc cttatcagtg ccgaccgtgg tcatatcgaa ctcgatggct
     2581 tcgacgtcac gacgctgccc atgtatcagc gcgcccggct cgggattggc tatttgccgc
     2641 aggaagcctc gatctttcgc ggtctcaacg tagaggacaa cattcgttcg gtgctcgaag
     2701 tcgtcgagcc ggaccgccgc cgccgagagg ccgacctcaa cgccctgctc gaggaattca
     2761 acatcgcacg ggtgcgcaag acgcccacta tcgctttgtc aggcggcgag cgtcgccgcg
     2821 tggaaatcgc acgcgctttg gcgacgcggc cgagctacat gctgctcgac gaaccattcg
     2881 caggcatcga tcctattgct gtcggcgaca ttcaggcgct ggtccgtcat ctcactaacc
     2941 gaggaatcgg cgtcctgata acggatcaca atgtgcgcga gacgctggga ctcaccgatc
     3001 gtgcctacat catctattcc ggggaagtgc tgatggaggg ccgcgcggac gacatcgtca
     3061 acaatccgga cgtccgccgt ctctacctgg gcgaagagtt ccggctatag gtcgcgtgca
     3121 cacaacttat gcaacgccgc gttgcataat cgcgtatcgc ctgctccggt aacctgatat
     3181 acccaagcaa gaatcggacc acttctcgcc gggattttta tggcgttgtc acaaagactg
     3241 gagtttcgcc agacgcaagg gctggtgatg acgccgcagc tgatgcaggc catcaagctg
     3301 ctgcaactct ccagtttcga tctggcagcc tacgtggaag gcgagcttga acgtaatccg
     3361 ctccttgagc ggccgaacga cgaggaatcg ccagccccga atgccgaaac aaacggcccc
     3421 ccgccggaaa acgccgacga tggtcctgcc aattcggact ggatgggagc tgcccttgag
     3481 accagccgca gctcgatgga gcaaggactc ggcaccgagc tcgaaaatgt ctttcctgac
     3541 gacggcggag aaaaaatccc acaatcggga gagaacgcag cgccagccta ttccgagtgg
     3601 tctggagcaa cgtcgggcgg ggttgaggac tacaatcttg aggctttcgt ctcggtcgag
     3661 acaacgcttg ccgatcacct cgccgagcaa atggccctgg caatttccag cccggcaggg
     3721 cgaatgatcg ggcaatacct gatcgatatg gtcgacgagg ccggctatct gacgggcgat
     3781 cttgaggccg tcgtcgataa gcttggcgct cgacggagcg atgtggagct cgtgcttgca
     3841 gtgctgcaaa catttgatcc acctggcgtg tgcgcgcgca atctcaccga atgccttgcc
     3901 atccagttga aggagcgcga tcggtacgac ccggcaatga agacactggt cgaacatctc
     3961 gctctactcg cgaaaagaga tctttccgcc ctgcgtcgcc tgtgcggggt caacgacgag
     4021 gatctcagcg acatgattgc cgagatccgc acgcttaatc ccaagcccgg cctcgcgttc
     4081 ggctcaacga tggtgcagcc aatcgttccg gatgtattcg tgcgcgctgc gcccgatggc
     4141 acctggcaag tggagctgaa ttccgacacg ttgccgaaag ttctcataaa ccagcgctat
     4201 tatgcgcagg tttccgaatc gagccggagc gacaaagaga aagcctacat tgccgactgc
     4261 atgcagacgg caacatggct ggttcgggcc ctcgaccagc gcgcaaaaac cattctcaag
     4321 gtatcaagtg aaatcgtgag gcagcaggac ggattttttg ccaatggcgt gcagcatctg
     4381 cggccgttga atttgaaaac tgttgccgac gcgattggca tgcatgaatc gactgtgtcg
     4441 cgcgtcaccg ccaacaaata tatggcgaca agccgcggca ttttcgaact gaaatatttc
     4501 tttacctcgg cgatcgccgc agccgatgga ggcgaggccc attcagccga agcggtccgt
     4561 caccgaattc gtcaaatgat cgatgatgaa agcgccgagc acgtgctgtc ggacgacacg
     4621 attgtggaga aacttcgcga ggcaggaatt gatatcgcgc gccgcacagt tgccaaatac
     4681 cgcgaggcca tgcgtatccc gtcgtcggtg cagcgccggc gcgaaaaatt gaccgccagt
     4741 tcctgatcgg ctgatccaac ggattgacgt gcggaacatt tttaaggtca aataatccgc
     4801 gccacgtgga ccaggtgttt gattggcacc gatggaggtc agccgatgcc tttacgcgtt
     4861 tcgggaagga acatcagcat cggcgcggcg ctgcagcaaa aaataaccga acgtgtcgaa
     4921 gaggcagcgt caaaatactt ccgcggcggg tattcaggcc atgccacggt cggcaaggat
     4981 ggctttggtt tccgaacaga atgtgttctg catcttgatt ccggtgcatt gctcgaggct
     5041 gaagggatgg cacccgatcc ctatgacagc gcggaacagg cagcgattcg gatagaaaag
     5101 cgtttgcggc ggtacaaacg ccgccgcaag gaccaccagg cccgtcgcgg ccggcggggg
     5161 agatcaaaaa atgccagaaa agcgacaatc ggaagctgag ttctcccatt gacggcgacg
     5221 ttgaccgctc ctatggtccg ccgccttcaa caaccccctt tgcaactcgg cgccgttatg
     5281 accgatcatc ggacatgtcc atgacgctta ccgacctcgt cgcgccgaac gcggtaattc
     5341 cggctctcaa ggttaataac aagaagcagg cgattcagga actggccgcg cgcgctgccg
     5401 aactcaccgg gcagaacgag aaggctatcc tggagatcct gcttcagcgc gaaaaactgg
     5461 gctcgaccgc agttggcaat ggcgttgcaa ttccgcacgg caagctaacg aagttggggc
     5521 gcctgttcgg cttgtttgcg cggcttcata aatcaatcga tttcgaagca ctcgacaatc
     5581 aaccggttga cctgattttc ctgctgctcg caccggaagc cgccggcgcc gatcatctca
     5641 aggccctggc acgcgtcgcg cgacagcttc gtgatcccga aatcgctcgc cgccttcgcg
     5701 aatcgagcga tgctgatgcg ttatatgccg tgctggcgat gccgccggct tcaagcgccg
     5761 cctgagcaag aactggatca agagtcaatt tgaggcgtca agaatcaatc aggcgcagcg
     5821 gggattcgct gcgcctggtt cgaaactcgc ggcgtgacgc atcgggcctc gcccaacttc
     5881 ctcacattct acgccgcaga tttctcagat cagtgtacgc tgaccggctc gagctcctgg
     5941 ctccaggcgt tggcgagcgc ggcttcacgc gtatcggtca gcatgatcgg cgtgccatcg
     6001 gcggcatgca gcgaaaatag cttgaggccg ggcgcgatct ttggcgcctg cgggaaaagg
     6061 gtcgctacat cctcggagcg gatcgtcttg acataagcca ggcgtccgtc gcccagctgc
     6121 gccagtgctt cctgggtaat gagcggattg gccttattc
//
LOCUS       DATDHO010000517         1745 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_173212, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000517 DATDHO010000000
VERSION     DATDHO010000517.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173212"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..885
                     /locus_tag="VIY07_09885"
     CDS             <1..885
                     /locus_tag="VIY07_09885"
                     /inference="COORDINATES: protein motif:HMM:NF024644.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HEY6382100.1"
                     /translation="QCGRRQLAHSRDQSVSLQHQEKGPRMSTPTVKPKAMIQDNTRCI
                     GCRACMVACKSWNDLPEDKTDFFAGDGYQNPRDLDANNYTLITFNEVVTGAKPDWVFG
                     RQLCMHCDHPACASACPTTALNKTPIGAVVFDEDRCIGCRACMQACPFIIPKYDYDSF
                     APKIHKCTFCADRLEVGLDPACATVCPTGAISFGDRDDMVTEAKRRIAAAPSTYIPEI
                     YGLDEVGGTSVLHLSSVPFEQIGYITGLPKTPMPDLTHRWLRVTAPVFAVLYGLFAAL
                     NWIVRRRMRRQGHEGEHT"
     gene            882..>1745
                     /gene="nrfD"
                     /locus_tag="VIY07_09890"
     CDS             882..>1745
                     /gene="nrfD"
                     /locus_tag="VIY07_09890"
                     /inference="COORDINATES: protein motif:HMM:NF015851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NrfD/PsrC family molybdoenzyme membrane anchor
                     subunit"
                     /protein_id="HEY6382101.1"
                     /translation="MNWRIRLTWWDKLLLAIMAVAAVIAFVRFATGIGTIANINNAYP
                     WGWWVGYGIMTMIAIGGVGFTITALVEILGVHRYHSFLRPAVLMAFLCYASAITMLMV
                     ELGRPWMVWMVLVSWAPTSALFEVGWCAFLYLTVLALEFAQVPLEEAGWGRALRIVRA
                     IYIPIMLLGVTLSHLHQSSLGTLMALIPHKINVLWWSDLLPLIFLFSAIMAGPAMAIL
                     EHLAAARWLGFTPRMDLLAGLARIEVWLVGLFLAFQMGDLFYRGAVDAMFSGTWLAVS
                     FWVEIGFGPLLP"
BASE COUNT          301 a          549 c          507 g          388 t
ORIGIN      
        1 cagtgtgggc gacgccaact cgcacattcc cgagaccaaa gtgtttctct gcaacatcaa
       61 gagaaaggac cgcgcatgag cacaccgaca gtgaaaccga aagcgatgat tcaggacaat
      121 acccggtgca tcggttgccg ggcgtgcatg gtggcctgca agtcctggaa cgatcttccg
      181 gaggacaaga cggatttttt cgccggcgat ggctatcaga acccgcgcga tctcgacgcc
      241 aacaactaca cactcattac cttcaacgaa gtcgttaccg gtgccaaacc cgattgggtg
      301 ttcgggcgcc agctctgcat gcactgcgac catcccgcct gcgcatcggc gtgcccgacg
      361 acggcgttga ataaaacgcc gatcggtgcc gtggtgttcg acgaagaccg ctgcatcggc
      421 tgccgcgcct gcatgcaggc ctgcccgttc attattccca aatacgacta cgacagcttc
      481 gcgccgaaga ttcacaagtg caccttctgc gccgaccgtc tagaggttgg cctggacccc
      541 gcctgcgcga cggtatgtcc gaccggcgcg attagcttcg gcgaccgcga cgacatggtt
      601 accgaagcga agcggcggat cgcggccgct cccagcactt atatcccaga aatctacggc
      661 ctcgacgagg tcggcggcac cagcgtgctg cacctttcgt cggtgccgtt cgaacagatc
      721 ggctacatta ccggcctgcc gaaaacaccg atgcccgatc tcacgcatcg atggctgcgc
      781 gtcacggcgc cggtgttcgc cgttttgtac gggctgttcg ctgcgctgaa ctggatcgtg
      841 cgccggcgca tgcgccgcca aggccacgaa ggagagcaca catgaactgg cgaatccggc
      901 ttacctggtg ggataaattg ctgctggcga ttatggcggt ggccgccgtc attgctttcg
      961 tgcgattcgc gaccggcatc ggcacgatcg ccaatatcaa caatgcttac ccgtggggct
     1021 ggtgggtcgg ctacggcatc atgacgatga tagccattgg cggcgtcggt ttcaccatca
     1081 cggccttggt ggagatcctg ggcgtgcatc gctaccactc gttcctgcgc cctgccgtgc
     1141 tcatggcttt tctctgctat gccagcgcga taaccatgct catggtggag ctcggccggc
     1201 cgtggatggt ctggatggtt ttagtttcct gggcgcccac ctccgcgttg ttcgaagtcg
     1261 gctggtgcgc gttcctgtat ctcaccgtgc tcgcccttga gttcgcccag gtgccgctcg
     1321 aagaggccgg ctggggacgc gcgctgcgca tcgtgcgcgc catttacatt ccgatcatgc
     1381 tcctcggtgt gaccttgtca cacctgcacc agtcgtcgct gggtactcta atggcactca
     1441 tcccccacaa gataaatgtt ctctggtggt cagatctgtt gccgttgatc tttctcttct
     1501 ctgccatcat ggcaggcccg gcgatggcga tcctcgaaca cttggccgcc gcgcgttggc
     1561 tcggatttac ccctcgcatg gatctgcttg ccggccttgc ccgcatcgag gtctggctcg
     1621 tcggtctttt tctcgcattc caaatgggcg atctcttcta tcggggtgcc gttgacgcca
     1681 tgtttagcgg aacgtggctc gccgtgtcct tctgggtcga gatcggtttc ggcccactcc
     1741 ttccg
//
LOCUS       DATDHO010000518         1727 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_272761, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000518 DATDHO010000000
VERSION     DATDHO010000518.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272761"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..388)
                     /locus_tag="VIY07_09895"
     CDS             complement(<1..388)
                     /locus_tag="VIY07_09895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEY6382102.1"
                     /translation="MSEPARETIYALSSGRPPAAIAVVRISGPHAGEALKTLTGKLPT
                     PRMATLARIRGSNGEAIDQAVVLWFPAPHSETGEDVAELQLHGGRAVIASVFAALSQI
                     PGLRPAEAGEFSRRAFENGKIDLTSVE"
     gene            689..1051
                     /locus_tag="VIY07_09900"
     CDS             689..1051
                     /locus_tag="VIY07_09900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY6382103.1"
                     /translation="MDSKTNSVTGAALKHAIETRDGRTLTNFYAEDAVLRIVDRNNPP
                     SRPREVKGKNAIGAFWDDIRGRAMTHKVETSVSEHDKLAFSQACAYPDGMKVLCLALC
                     ELKAGKIARQTVVQVWDE"
     gene            1141..>1727
                     /locus_tag="VIY07_09905"
     CDS             1141..>1727
                     /locus_tag="VIY07_09905"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY6382104.1"
                     /translation="MTRRLPLLAILLSVGFADCTGSIAQAQGDLARAYRVIASKQFVD
                     LTHSFGPESPVWSGFGQAKMTPAADPKTREAYTIAKDGFRGTYYQMVGQYGTHVDPPA
                     HFDEKGITMDEIPLKQMILPLIVLDNTPYLAKDPNHAFSVADLKAWEKRHGRVPRGAF
                     VALRTDMYKDWETNPERFKRSPFPAWAFETIKFLY"
BASE COUNT          377 a          520 c          511 g          319 t
ORIGIN      
        1 cttccaccga cgtgagatca atcttgccgt tctcgaaagc gcggcggctg aattcgcccg
       61 cttcggctgg acgcaagcct ggaatttgcg acagggccgc aaacacggac gcaatcaccg
      121 cgcgtccgcc gtgaagctga agctcggcaa cgtcctcgcc ggtttcgctg tgcggagccg
      181 gaaaccaaag cactacagcc tggtcaatgg cctcgccatt gcttccgcgg atgcgcgcca
      241 acgtcgccat tcgtggggtg ggcaattttc cggtcaaggt cttgagtgcc tcgcccgcgt
      301 gcggaccgga aatgcgcacg acagcaattg ccgccggcgg ccggccggag gacagggcat
      361 agatcgtttc gcgcgctggc tcagacatcg cggcgcacgg aagcgccgag atagggcagg
      421 ggtcaagcct taacggcaag ttgcgcagca ttggcgcagc cgacgaaatg gccttacttg
      481 ccaagcccag ctgcgtacgc cgattattga tggcatagtc gtctggcacg gtggggtgac
      541 cagaaacgca ttacgtcctc gctggaacca cgcatggacg atgtccctgc ggtgatggat
      601 gcggtcggca gcagccgagc cgccttgctc ggcgcctccg agggcgggcc aatgtcgatc
      661 ccatgacagc gtctacttgg aggtcaatat ggattcgaaa accaattccg tgacaggcgc
      721 cgcgctcaaa cacgccatcg aaacgcgcga tggacgcacg ctgacaaact tctacgccga
      781 agatgccgtt ttgcgaattg tcgatcggaa taatccgcca agcagaccgc gcgaggtgaa
      841 gggcaagaac gcaataggcg ctttctggga cgatattcgc ggccgcgcga tgactcacaa
      901 ggttgaaacg agcgtcagcg agcacgacaa gctggcgttc agccaagcct gtgcctatcc
      961 cgacggaatg aaggtgcttt gcctcgcgct gtgcgagctc aaagcaggca agatcgcgcg
     1021 ccagacagtt gtccaggtgt gggatgaata acaagatcac agaggcccgt tcgccaattc
     1081 cgacagcgcc tgcgcccttg cgatatgatc ggttgaaacc ccgatctatc ggagggcgcc
     1141 atgacacgaa ggctgccgct gctcgccatt ctgctctcgg ttgggtttgc agactgcacg
     1201 ggctcgatcg cccaggcaca aggcgatctc gcgcgcgcgt atcgcgtgat cgcgtcaaaa
     1261 caattcgtcg atcttactca cagtttcgga cctgagagtc cggtatggtc aggctttggc
     1321 caggcaaaaa tgacaccggc agccgaccca aaaacccgcg aggcgtatac catcgccaag
     1381 gacggcttcc gcggcactta ctatcaaatg gttggacagt atggcacgca cgtcgatccg
     1441 ccggcacatt tcgacgagaa agggatcacg atggacgaga tcccgctcaa gcaaatgatc
     1501 ttgccgctca tcgttctcga taatacgccc tatctcgcca aggaccccaa ccatgcgttc
     1561 tcggttgcgg atctcaaggc gtgggaaaaa cgtcacggcc gcgttccacg cggcgccttc
     1621 gtggccttgc gcacggacat gtacaaggat tgggaaacca acccggagcg cttcaagcgc
     1681 agtccatttc ccgcctgggc ttttgaaacc atcaagtttc tctatga
//
LOCUS       DATDHO010000519         7549 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_124398, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000519 DATDHO010000000
VERSION     DATDHO010000519.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7549
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124398"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..837
                     /gene="fhcD"
                     /locus_tag="VIY07_09910"
     CDS             <1..837
                     /gene="fhcD"
                     /locus_tag="VIY07_09910"
                     /EC_number="2.3.1.101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran--tetrahydromethanopterin
                     N-formyltransferase"
                     /protein_id="HEY6382105.1"
                     /translation="ALTITAHNAAWARQAAATMTGFATSVIGCGCEAGIDRVLNPDET
                     PDGRPGVRVLIFAVSTSELQKQLQARVGQCVLTSPGSACYAGLEAKERLKLGSAVRFF
                     GDGWQISKRFGDKRYWRIPVMDGEFICDATTGLSRTAVGGGNIIVMGSTSETTLAATE
                     LAVEAIAAVPDVIMPFPGGIARSGSKVGSKYKGVRASTNEAYCPTLRGASNSALDPDI
                     TSVLEIVIDGLTSDSVAAAMRAGMRAVLALGPERGTLRIGAGNYGGKLGAHHYHLKDL
                     LP"
     gene            834..1652
                     /locus_tag="VIY07_09915"
     CDS             834..1652
                     /locus_tag="VIY07_09915"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018267749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018493 - formylmethanofuran dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0015948 - methanogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit C"
                     /protein_id="HEY6382106.1"
                     /translation="MSPLVFTLREAPAQRLDLAPLTPDRLAGLSQSNIAAIQLQTTRE
                     RVLAGDVFKIRMGDATQIRFEGGNERFDRIGAGMSQGEVSVDGDVGIQAGRFMQGGRL
                     AIAGNAGPWAASGMTDGSLTISGHAGDRLGGPLAGETIGMRGGVVIVRGNAGARAGDR
                     MRRGMIIVEGKADTYVGSRMIAGTIIVRGRAGRLPGYLMNRGTIVTVDGSDALSPTFA
                     DSGVHELLATALMARYVETYSPGVAAMLRRPWRRLLGDMAVLGKGEIFYPSVPN"
     gene            1710..1916
                     /locus_tag="VIY07_09920"
     CDS             1710..1916
                     /locus_tag="VIY07_09920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382107.1"
                     /translation="MGLLELVITVCAIADPSLCEDQRLQYASGASLRQCAMGAAPYIA
                     QWIGEHPKWMAVRWHCEYSGHKKI"
     gene            1936..2763
                     /gene="folP"
                     /locus_tag="VIY07_09925"
     CDS             1936..2763
                     /gene="folP"
                     /locus_tag="VIY07_09925"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEY6382108.1"
                     /translation="MMLPAARTKRDAFLSAIGTRSLVMGILNVTPDSFFDGGRFLAVR
                     DAIDHVRRMIADGCDIVDIGAESTRPRAKPVDETEEMARLDEVLMAVTTFDVPMSIDT
                     TKAAVAARALSCGVILVNDVWGLQKDPRMADVVAEAEAAVVIMHNRGEKDENLDIIGD
                     IRAFFEHSLAIAAHAGIPKRRIILDVGIGFAKSARQNREVIRRLGELKDFGLPLMVGA
                     SRKKFLGSLTGDGIEGTLPGTLAASLAAVAAGAAIVRVHDVAEHAAALRVFQAIRDK"
     gene            complement(2781..3125)
                     /locus_tag="VIY07_09930"
     CDS             complement(2781..3125)
                     /locus_tag="VIY07_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382109.1"
                     /translation="MCRLIIVGAALALMNFGAQAQDKPIRFWNLTVYTVTALQMSPAG
                     QDQWGINQCKNDRDGTVDHNERLRITDVKPGRYDAKIADKIGRVCIVRNIDVKEGAIF
                     TIEEKQLTECGK"
     gene            complement(3163..3960)
                     /locus_tag="VIY07_09935"
     CDS             complement(3163..3960)
                     /locus_tag="VIY07_09935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEY6382110.1"
                     /translation="MPARSIAVLTLCVCAVAFSAAAQDMMRYVDLNSPEMTTAEMTRD
                     EVATKAAAATPSHPADFTGKKLSGLDLSGLDLSGAIFRAARLNKTKLVGAKLDRAVLD
                     QAWLLEADLSNTSLQRANLFAAQMLRTRLDGADLSGARIVADLSSASLVDAKLTGANL
                     GADMKNQSMGLMHTVLKSARLDGADLRNADLSRAELQFASLKKSNLSGASLRGADLSG
                     ADLTGATVSGADFLGTDLASARLTAPIGLEDARNFDKAVNRDRLLKQ"
     gene            complement(4035..4697)
                     /locus_tag="VIY07_09940"
     CDS             complement(4035..4697)
                     /locus_tag="VIY07_09940"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY6382111.1"
                     /translation="MTLLIFDCDGVLVDSELLANEALAELISALGHPMTTQQAVQVFS
                     GLRLRDVLESAEALLSFPIPADLGAAAGQRLLERFRRELQPVKGVREALDMLPDPRCV
                     ASSSSRERLELSIEVTGLKKLFGENIFSADQVEHGKPAPDLYLFAASSLGVTPANCLV
                     IEDSTLGIQAAVSAGMKTIGSAGASHATVELAQRLKEAGANIVIAAMSDLPAAIDRLT
                     RC"
     gene            complement(4719..5459)
                     /locus_tag="VIY07_09945"
     CDS             complement(4719..5459)
                     /locus_tag="VIY07_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6382112.1"
                     /translation="MNDARSAGETGHLKVRIAHKAFTAASGERFDVLRDICFDLRQSE
                     VGALVGPSGCGKTTILRIIAGLDVDFNGTITRPLSGRLGMVFQEPRLLPWRTVDDNVR
                     LVAPSIAPEMLASLFEVLDLEAHYLHYPGELSLGLARRVALARALAIDPDLLLLDEPL
                     VSLDEALAERLRSQLAALIESRPITTLLVTHDVQEAVRLADRIFLLSPRPAQIVAEIP
                     LATPRSIRSEGEIAKIVDEVSSRISGHG"
     gene            complement(5419..6156)
                     /locus_tag="VIY07_09950"
     CDS             complement(5419..6156)
                     /locus_tag="VIY07_09950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382113.1"
                     /translation="MVRLISLTLFLAIWWFASFFAGPQMLPGPDKVLTAIAAQAQSGD
                     LFFQLGVTLARVLAAFTIAMIAGTAIGLLMGRVKIADRIGDPWLIVLLNLPALVIIVL
                     AFIWGGLTEIAGVLAVAINKLPNTVVAVREGARALDTSLDEMARVFALPRGKFLWHVV
                     LPQLAPYLAAAGRSGLSLVWKIVLIVELLGRPNGIGFQIGVAFQLFDVTLILAYALAF
                     VAVILIIETAVVQPIERRAFRWRNRAP"
     gene            complement(6160..7140)
                     /locus_tag="VIY07_09955"
     CDS             complement(6160..7140)
                     /locus_tag="VIY07_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382114.1"
                     /translation="MSNLRAVIGFCVTAAVCFWVDRAPADVIRLAVQKTGTVAWVLDV
                     IRAHQLDKRAGITVTTLELATPEAGKIALRGGSVDVVAADWLWVSRERELGAKLVFYP
                     YSTALGAVMVPENSSIRTLADLQNKTVAVAGGPLDKSWLLLRAAAKQKGVDLGTQAKV
                     IYGSPALLAGKMLHGEFDATLNYWNFSAHLETRGFRQLVGIDELLPNFGVTGPLSMIG
                     YVFDEAWAVAHRETINRFLDVTQKAKQILLKSDAEWERIAPLVGARDTATLNIYRDRY
                     RQGIPSRPVDSEEKDASALYRVLLKLGGTALVGEGKELASGTFYRPGIQN"
     gene            7339..>7549
                     /locus_tag="VIY07_09960"
     CDS             7339..>7549
                     /locus_tag="VIY07_09960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009488692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382115.1"
                     /translation="MFRLPGGLAGVGFALVLGVAAQATAQTNDYPTEARADYVFACMK
                     THGDTQVALRQCSCSIDIIATLLSYD"
BASE COUNT         1620 a         2213 c         2253 g         1463 t
ORIGIN      
        1 gccctaacga tcaccgcgca caatgcggct tgggcacgcc aggcagccgc aacgatgaca
       61 ggatttgcaa cttcggtgat tggttgcggt tgcgaagcag gtatcgatcg tgtcctcaat
      121 cctgacgaaa cgcccgatgg cagaccgggc gtgcgggtgc ttatttttgc cgtctcaacc
      181 agtgagttgc aaaaacagct gcaggcccgc gtaggccaat gcgtgctgac gagtccggga
      241 tcggcctgtt acgcggggct ggaggcgaaa gaaagattaa agcttggcag cgcggtgcgc
      301 ttttttggcg acggctggca aatctcaaag cgctttggag acaaacgtta ctggcgcata
      361 ccggtgatgg atggtgaatt catttgtgac gcaaccaccg gcctcagcag aacagctgtc
      421 ggcggtggaa atatcatcgt catgggttca acgagcgaga cgacactcgc ggcaaccgaa
      481 ctcgccgttg aggccatcgc ggcagtaccg gatgtgatca tgccatttcc gggcggcatc
      541 gcgcgttcgg gctctaaagt cggctcgaaa tacaaaggtg tacgcgcttc aaccaatgag
      601 gcctattgcc cgaccttgag gggagcaagc aacagtgcgc tcgacccgga catcacatcg
      661 gttctggaga tcgttatcga cggcctcacc tcggattcag ttgccgccgc catgcgcgcc
      721 ggcatgcgcg ccgttttggc cctgggtccg gaacggggca ccctgcgcat tggtgcagga
      781 aactatggag gcaagctggg cgcacatcac taccatctca aggatttgtt gccgtgagcc
      841 cgctcgtttt cacgttgcgc gaggcccccg cacagcgact cgatctggcg cccctgacgc
      901 cggatcgtct ggctggtctg agccaaagca atatagccgc catccaactc cagacgacgc
      961 gcgaacgtgt gcttgccggg gacgtattca aaatccgtat gggcgacgct acgcaaatcc
     1021 gcttcgaagg cggcaacgag cgcttcgacc gcatcggtgc tggtatgagc caaggcgaag
     1081 ttagtgtcga cggcgacgtc ggcatccaag ccggtcgctt catgcagggg ggcagacttg
     1141 caatcgccgg gaatgccgga ccctgggctg cgtccggcat gacagacggc agcctcacga
     1201 tctcgggcca tgccggcgac cgactcggcg gacctcttgc cggcgagacg atcggcatgc
     1261 gcggcggcgt ggttatcgtt cgcggtaacg ccggggcacg agcaggcgac aggatgcgac
     1321 gcggcatgat catcgttgaa ggcaaggctg acacctacgt gggcagccgc atgatcgcgg
     1381 gtacgattat cgtacgcggc cgcgccggcc ggctaccggg ctatcttatg aaccgtggca
     1441 ccatcgtcac tgtggatggg agcgatgcct tgtctccgac gttcgccgac tcaggcgtgc
     1501 acgagttgct cgccactgcc ctgatggcgc gctacgtcga gacttacagt cccggagttg
     1561 ctgcgatgct gcggcggccg tggcggcgat tgctcggcga catggcagtc cttggcaagg
     1621 gagaaatttt ctacccctcc gttccgaact aagctcgtca gattcagtta agtacactag
     1681 gataagctgt tcgtgcggag atatacggca tgggcttgct cgaactggtc atcacagtgt
     1741 gcgccatcgc agacccgtcg ctttgcgaag atcagcgact tcagtacgcg tcaggtgcat
     1801 cactgcgaca gtgtgccatg ggcgcagcgc cttatattgc gcaatggatc ggcgagcatc
     1861 cgaaatggat ggcggtgcgc tggcattgcg aatactccgg ccacaaaaag atctgatgct
     1921 ggtgcttgat actcgatgat gctgcccgcc gcgcgcacca agcgcgatgc ttttctttct
     1981 gcaatcggca ctcgttcgct cgtcatgggc atcctcaacg tgacgcccga ctcgttcttc
     2041 gacggcggac gattccttgc cgtgagagac gccattgacc atgtcaggcg tatgatcgcg
     2101 gacggttgcg atatcgtcga cattggtgcg gagtcgactc ggccccgcgc aaaaccggtc
     2161 gatgagacag aggagatggc ccgtctcgat gaagtgctca tggcggtgac cacattcgac
     2221 gtcccgatgt cgatcgacac cacgaaggcg gcggtggcag cgcgcgcgct ctcgtgcggg
     2281 gtcattctcg tcaatgacgt ctggggcctg cagaaagatc cgcgcatggc ggatgtcgtg
     2341 gcagaagccg aggccgcagt cgtgatcatg cataatcgcg gggaaaaaga tgagaatctc
     2401 gatattattg gcgatattcg cgctttcttc gagcactcac ttgcaattgc ggcacacgct
     2461 gggattccca agcgccgcat catcctcgat gtcggcatag ggttcgccaa gagcgcccgc
     2521 caaaatcgtg aggtcatccg caggctcggc gagctcaagg attttggact gccgcttatg
     2581 gtcggcgcgt ctcgaaaaaa atttctcggc tcgctgaccg gcgacggaat cgagggaacg
     2641 ctacccggga cacttgcggc gagccttgcg gcggtcgccg ctggcgccgc gatcgttcgc
     2701 gtgcacgatg ttgccgagca cgctgcagca ctgcgcgtct ttcaggctat ccgcgacaaa
     2761 tgaagattca ttaagggctg tcacttgccg cattcggtga gctgcttctc ctcgatggtg
     2821 aaaatagcgc cctccttcac atcgatattg cgcacaatgc atacgcggcc gatcttgtcc
     2881 gcaatctttg catcataacg ccccggcttt acgtcggtta ttcgcaggcg ttcgttgtga
     2941 tcgacagtcc cgtcacgatc gttcttgcac tgattgattc cccattggtc ctgacccgca
     3001 ggcgacatct gaagcgccgt aacggtgtag acggtcaaat tccagaagcg gatcggcttg
     3061 tcttgggctt gcgctccgaa attcataagt gcaagggcag cacctacgat gatcagtctg
     3121 cacatgtcgt tgctccaacg ggttcgggca tgaggcggcc gtctattgtt tcaagaggcg
     3181 gtcgcgatta acagccttgt cgaaattgcg ggcgtcttca agaccgatag gggccgtcaa
     3241 tcgcgccgaa gcaagatcgg ttccaagaaa atcggcgccg gacactgttg cgccggtgag
     3301 atcggccccg ctgagatcgg cgccgcgcag cgaggcaccc gaaaggttgg atttcttgag
     3361 cgacgcgaat tgcagttcgg cgcgagatag gtccgcattg cggaggtcag cgccatcaag
     3421 ccgcgccgat ttgagaaccg tatgcatcaa ccccatggac tgatttttca tatcggcacc
     3481 gagatttgcg ccggtaagct tggcatcgac caggctcgcg ctgctgagat cagcgactat
     3541 tcgcgctccc gagagatcgg cgccgtcgag ccgggttcgc aacatctgtg cggcaaacaa
     3601 attggcgcgt tgcaagctgg tgttactgag atccgcctca agcagccaag cctggtcgag
     3661 gaccgcacga tcaagctttg cgccgacgag tttggtcttg ttaaggcgcg cggcgcgaaa
     3721 aatcgcaccg gagaggtcga ggccggagag atcgagcccc gacaacttct tgccggtaaa
     3781 gtcggcgggg tggctgggcg tggcagcggc cgctttggtg gcgacctcgt cgcgcgtcat
     3841 ttctgcggtg gtcatctcag gcgagttcag atcgacataa cgcatcatgt cctgtgccgc
     3901 cgcggaaaac gcgacggcac acacgcaaag cgtcagtacg gcgattgacc gagccggcat
     3961 gcggttcgca tccaagcaat actggggcaa atatttgctc ctggtggtcc gaagggcaag
     4021 tgtgccctgg aactctagca gcgcgttaaa cggtctatgg cagcgggcag atcggacatc
     4081 gcggcgatta caatgttggc gccggcctcc ttcagccgtt gagcgagctc cactgtcgca
     4141 tgacttgcgc cggcagagcc gatcgttttc atccctgccg aaacagcggc ctgaatgccc
     4201 agcgtggaat cctcaatgac gaggcagttg gcgggtgtta cgcctaatga gcttgcggcg
     4261 aacaagtaaa gatctggcgc aggcttgccg tgctcaactt gatcggcact gaagatattc
     4321 tccccaaaaa gcttcttgag gcctgtaact tcgatcgaga gctcaagccg ctctctggaa
     4381 gaggaagatg cgacacagcg cgggtctggc aacatatcaa gggcctcgcg aacgcctttg
     4441 acaggctgga gctcgcgccg gaaacgctcg agcagtcgct gtcccgccgc tgctcccagg
     4501 tcggcgggta ttgggaacga cagcagcgcc tccgcagatt ccagaacatc gcgaaggcgg
     4561 aggccagaga aaacctggac ggcctgctgg gtcgtcatag ggtggccaag cgcgctgatc
     4621 agctcggcca aagcctcatt ggcgagcagc tcagaatcaa ccaacacacc gtcgcaatcg
     4681 aagatcagca gcgtcatgct tcgtgattga atgtctgact agccgtggcc gcttattcga
     4741 ctcgagacct cgtcgacaat tttggcgatc tctccctcgg accgaataga ccgcggtgtc
     4801 gcaagtggaa tttcggcaac gatctgcgca ggccgcggag acagcaggaa gatccggtca
     4861 gcaagccgaa ccgcctcttg aacatcatgg gtcacaagca gggtcgtaat cggacggctt
     4921 tctatcaagg ccgcaagttg cgagcgcagt cgctctgcca gagcttcatc aagcgacaca
     4981 agcggttcat caagcaatag caggtccggg tcgatcgcaa gtgcccgcgc cagcgcaacg
     5041 cggcgcgcaa gcccgagcga aagttcgccg ggatagtgca gataatgcgc ctccagatcc
     5101 aaaacttcga atagagacgc aagcatctca ggggcgatgc tcggcgcgac gagacgcacg
     5161 ttgtcatcga cagtccgcca gggaagcaag cgtggttcct ggaagaccat cccaaggcga
     5221 cctgataacg gacgcgttat cgtcccatta aaatcaacat caagccccgc aatgatccga
     5281 agaatcgtag tcttgccgca accggacgga ccgacgagag caccgacttc actctgcctc
     5341 aggtcgaaac agatatcgcg cagaacgtcg aaacgctcgc ctgacgctgc cgtgaacgcc
     5401 ttgtgcgcaa tacggacctt aaggtgcccg gtttcgccag cggaacgcgc gtcgttcaat
     5461 gggctgcacc actgcggttt cgataatgag aatgacggct acaaacgcga gcgcataggc
     5521 aagaataagc gtcacgtcaa ataactgaaa ggccacgccg atttgaaatc ctatgccatt
     5581 cgggcgcccg agcaattcga cgatgagcac gatcttccaa accaacgaaa ggcccgaacg
     5641 ccccgccgcg gcgagataag gcgcgagctg cggcaaaacg acgtgccaca agaactttcc
     5701 tcgtggcagg gcaaagacac gcgccatttc atcaaggctg gtatccagag cgcgggcacc
     5761 ttcgcgcacc gcaaccacgg tgttcggcaa cttgttgatt gcgacggcca atacgcctgc
     5821 aatttctgtg agcccacccc agatgaaagc cagcacaata atcaccagcg ccggcaaatt
     5881 cagcaacacg atgagccacg gatcgccgat ccggtcggca atttttaccc ggcccataag
     5941 cagcccaatc gcggtgccag ctatcatggc aatcgtgaag gccgcgagaa cccgtgccaa
     6001 cgtcacgccg agttgaaaaa acagatcgcc gctttgcgcc tgggcggcga tggcggtcag
     6061 cactttgtcc ggtcccggca acatctgggg tcccgcgaaa aatgaagcga accaccagat
     6121 tgcaaggaac agtgtaagcg agataagccg caccatagtt taattttgaa tgcctggtcg
     6181 gtagaacgtc ccggacgcaa gttctttgcc ctccccgacc aatgctgtac cgccgagctt
     6241 gagcagcacg cgataaagtg cgcttgcatc cttctcctcg gaatcgaccg gccggctcgg
     6301 aatgccttgg cgatagcggt cccggtagat attgagggtg gcggtgtcgc gcgcgccaac
     6361 cagtggcgcg atccgctccc actccgcgtc cgatttcagc aggatctgtt tcgccttttg
     6421 ggtgacgtcg aggaatcggt tgattgtctc gcgatgcgcg accgcccatg cttcatcgaa
     6481 gacataacca atcatcgaca gcggaccggt cacgccgaaa ttcggcagca gttcgtctat
     6541 gccgacaagt tggcggaagc cacgggtttc caggtgcgca gaaaaattcc agtaattaag
     6601 cgtcgcatcg aactcgccat gcagcatctt gcctgcaagc aatgcaggcg agccgtatat
     6661 cacctttgcc tgtgtgccca gatcaacacc cttctgcttt gccgcggccc gcaatagcag
     6721 ccagctcttg tcaagcggcc ctcccgcgac cgcgaccgtt ttgttttgca gatcggcgag
     6781 agttctgatc gatgaattct cggggaccat cacggcgccg agcgccgtcg aataaggata
     6841 gaaaacgagc ttggcgccga gttcgcgttc gcgggaaacc cacagccagt cggcggccac
     6901 aacgtcgacc gagcctccgc gcagtgcgat cttcccggcc tccggggttg ccaattccag
     6961 ggtcgtgacg gtgatgccgg cccgcttgtc cagttggtgc gcgcgtatca catccagcac
     7021 ccaagcaacc gtcccggttt tctgaactgc caaacggatc acgtcggccg gagcgcgatc
     7081 cacccaaaag cagacagcgg cggtgacaca gaacccgatg acagcacgca aattcgacat
     7141 gcgtagctag taggctgagt ggtgcagagc gtcaggcaga gattcgtttc ggccttgact
     7201 ataggagcgt atttgcattg acgctgccaa gaaggctgcg acactgttac caatcagcga
     7261 ggtgacggcc ttgagtgaac gacatcaagc actatcatcc cccgtaccgg agcccaatcc
     7321 gggcgcaagg gacgcataat gttcaggtta cctggaggcc ttgcaggcgt tggctttgcg
     7381 ctggtgctcg gagttgcagc gcaggcgact gcgcagacca acgactaccc gaccgaggcg
     7441 agagcggact acgtctttgc gtgcatgaag acccatggcg acacgcaagt tgcgttgcga
     7501 caatgttcct gctccatcga catcatcgcc acgttactct cctacgacc
//
LOCUS       DATDHO010000520         2709 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_321829, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000520 DATDHO010000000
VERSION     DATDHO010000520.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2709)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2709)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2709
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321829"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..659
                     /locus_tag="VIY07_09965"
     CDS             <1..659
                     /locus_tag="VIY07_09965"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6382116.1"
                     /translation="IASTGARRPVVIAADLLKPGVADLIRELLAAQGAEPQFVVNNAG
                     FGLVGLASTRDRDEQLQMIDLNVRVLTELSLAFIDTLARHRGGLLNVGSMAGFLPGPG
                     MAVYYATKAYVLSFTEALHSELKPAGIRVSVLCPGPVPTEFGDRAGLSKRSMEGPLSQ
                     SADYVAEAGYRGLMQGRRTIVPGAINKLITFFIRIIPRRLVLAFVDHRQRRRKAVWEA
                     "
     gene            737..1456
                     /locus_tag="VIY07_09970"
     CDS             737..1456
                     /locus_tag="VIY07_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase"
                     /protein_id="HEY6382117.1"
                     /translation="MLKPVLLILHQEHSSPGRVGQTLAKLGYPLDVRRPRFGDPLPET
                     MDDHAGAVIFGGPQSANDNEEFMHREIDWIQVPLRDKKPYLGICLGAQMLARQLGARV
                     FPHPDGHAEVGYYPIRPTEAGRKVCPDWPDHVYQWHREGFDLPDGSELLAEGDAFSVQ
                     AFRHGTGYALQFHPEVTHAMMYRWLVRGAHRMELPGAKQRHEHIADRAVHDLASRNWL
                     VAFIDHWIGDTSGNRIAKSAS"
     gene            1615..2418
                     /locus_tag="VIY07_09975"
                     /pseudo
     CDS             1615..2418
                     /locus_tag="VIY07_09975"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="PAS domain S-box protein"
     gene            2456..>2709
                     /locus_tag="VIY07_09980"
     CDS             2456..>2709
                     /locus_tag="VIY07_09980"
                     /inference="COORDINATES: protein motif:HMM:NF019174.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
                     /protein_id="HEY6382118.1"
                     /translation="MQSLASQTARAASSPTAFRERFEGRLIALSKAHDQLTMHHWESA
                     DLREVLSGSLAPYAGAHPERVLLRGEDVVLRPRAVLTLAMA"
BASE COUNT          499 a          790 c          862 g          558 t
ORIGIN      
        1 aaattgcctc gaccggggcg cgccgaccgg tcgtgattgc agccgatctt ctcaagcccg
       61 gcgtcgccga tctcatccgg gagttgttgg cggcgcaagg cgccgagccg caatttgtgg
      121 tcaacaacgc ggggttcggg ctggtggggc ttgccagtac gcgagatcgt gacgagcaat
      181 tgcagatgat tgatcttaac gtgcgcgtgc tgaccgaatt gtcgctcgcg ttcattgaca
      241 cccttgcccg ccatcgcggg ggactgctga acgtcggatc aatggccggc tttctgcctg
      301 gcccgggaat ggctgtctac tatgcgacca aggcttacgt gttgtcattc actgaggcct
      361 tgcacagcga gctcaagcct gccggcatac gggtgtcggt gctgtgtcca ggcccggtgc
      421 cgaccgaatt cggcgaccgt gccggtctca gcaaacgcag catggaggga ccgctgagcc
      481 aatccgccga ctatgtggcg gaggcgggct atcgcggtct gatgcaggga cgccgcacca
      541 ttgtgccggg cgccattaac aagttgatca ccttctttat ccgtataatt ccgcggcgcc
      601 tggtcctggc ctttgtggat caccgccaac gccggcgcaa ggccgtctgg gaggcatagc
      661 cgctccgctg ctgctcaggt tgcaaacggc ggcaaagccg ttactagtca gcactgcaag
      721 cgcttgccga atcatcatgt tgaagccagt ccttcttatt ctccaccagg agcattcctc
      781 gccgggccgc gtcgggcaga ccctggcgaa actcggctat ccgcttgacg tcagaaggcc
      841 acgtttcggc gacccgttgc cggaaacgat ggacgatcac gccggcgcgg tcattttcgg
      901 cggaccgcaa agcgccaacg acaatgaaga gttcatgcac cgcgagattg actggatcca
      961 ggtcccgctt cgcgacaaga agccatatct cggtatctgt cttggcgcac agatgctggc
     1021 gcgccagctt ggcgctcgcg tttttccaca cccggacggt cacgccgagg tcggctatta
     1081 cccgatccgg ccaacagagg ccggacgcaa ggtgtgtccg gactggcccg atcacgtcta
     1141 tcaatggcat cgcgaaggtt tcgaccttcc tgacggcagt gagttgctcg cggaaggcga
     1201 cgctttctcg gtgcaagcat tccgtcatgg caccggctat gcgctgcaat ttcatccgga
     1261 agtcacgcac gcgatgatgt atcgctggct ggttcgcggc gcgcatcgga tggaattacc
     1321 tggggcgaaa caacgccacg agcacatcgc cgaccgtgcc gtacatgatc tggcttcccg
     1381 caattggctc gtcgctttca tcgatcattg gatcggggac acgtccggaa accggatcgc
     1441 aaaaagcgcg tcctgaccgt gatttccggc gcggtgccat tgacaaatcg gtattcaagc
     1501 tgatcgttgc gtcgggggct ggggaatcag tggtgcacgc ggaggcgtgc gatggttgat
     1561 tccgaagagg cgcgcaatcc tgtcgagcgg ccgatgccgt cgctcttgag tgcgatgctg
     1621 cgcgcatcgg aagggatcct agagctcctg ccgattgcga ccttcatctg cgattcgaag
     1681 gggacgattc ttcagcataa ccgtcatgca gtggcagtct ggggcgcggc tccaaagcct
     1741 ggtcagacgc atgacgaatt cagggaaagc atccgcttct tcgaaatgga tggaacgccg
     1801 gtcgcgcgtt ctctggttgc cgaagtgctc gcgacaggaa agccagtgcg cgacgtagag
     1861 cgcatcgtcg aacatgccga cggcacgacg ctggttgtgt cggtcaacat cgatccgttg
     1921 cgcgatgcga agggtgagct ggtcggagcg gtaaactgtt ttatcgatgt cacggcccgc
     1981 aaacgggcgg acgcagcgct tgagcgttcg cggctgcacg ccctcgaaca ggaacagcga
     2041 cttgcggcca cttacgaaca tgccgcgatc ggtatttctg aagtcgatcc cgatggccgc
     2101 ttcctgcgcg tcaacgaagc gatctgcgcg atcaccggct tcggtcgcaa ggagctgctg
     2161 gccggcagat tgttttcgct acacgcatcc tgacgacgtc gatcccgatc gggaagcttt
     2221 tcgcaagcag gttggcggcg agcttgaatt ctattcagtg gagaagcggt ttatccgaag
     2281 ggatgggcgc gtgatctggc tttcggtccg ctcctcgccc atccgtgatg ccgacaatcg
     2341 gttgctttat gtggtgcgcg tcgtgcagga tgttaccgaa cacaaggcat cggagcggcg
     2401 ccagaagctg ctgatggatg agctgaacca tcgggtgaag aacaccctcg cgacggtgca
     2461 gtcgctggca tcgcagacag cgcgggcggc gtcttcgccc accgcctttc gcgagcgatt
     2521 tgaaggccgg ctgatcgcct tgtcgaaggc gcatgatcag ctgacgatgc atcattggga
     2581 aagcgcggat ttgcgcgagg tgctgtcggg aagtcttgcg ccctatgccg gcgcccatcc
     2641 ggagcgggtt cttctgcgcg gcgaagatgt tgtgttgcgt ccccgcgctg tgctgaccct
     2701 ggcgatggc
//
LOCUS       DATDHO010000521         1576 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_321854, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000521 DATDHO010000000
VERSION     DATDHO010000521.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1576
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321854"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            624..806
                     /locus_tag="VIY07_09985"
                     /pseudo
     CDS             624..806
                     /locus_tag="VIY07_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612899.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="kynureninase"
     gene            833..>1576
                     /locus_tag="VIY07_09990"
     CDS             833..>1576
                     /locus_tag="VIY07_09990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007065524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
                     /protein_id="HEY6382119.1"
                     /translation="MRPLVEFPRDARRAVRYVLTDIDDTLTDGGRLGAKAYGALEAVS
                     AAGMTVVVTGRPAGWCDMIARQWPVSAVVGENGACYMRYDAARGRMERRFWRDGAARA
                     ADRARLKALGRRILREVPGTALASDQPYREADLAIDYCEDVPPLGPEAVERILALFRA
                     AGATAKASSIHVNGWFGDYDKLAMTKRLFAEVFGVELDRARDNTVFVGDSPNDEPMFS
                     YFLKAVGVANVRRFLPGLRNPPRWVTRAEG"
BASE COUNT          280 a          474 c          506 g          316 t
ORIGIN      
        1 atgttgcctg gaggtcggct cttgcctttc aatcccgcca ttcgtctctt ccccggtggc
       61 agcattcatt ctgccatagc ggtttagttg tggcaaagta gtggcaaagt caaacaattc
      121 tattgtgttc tctggcagtt agacgcgcta cgaggattag tagtcctcgt gtcgtctgga
      181 ttcatttgct ggttgtattc gacgtgctcc gcttttttat gggctatgcc tacatggccg
      241 ctctagaaga ggctagcgta caccagaaca tcgcgccatt caccgacttc ctgtcgcagc
      301 ttgttaaaga ggggctccgc ggcaagccag tggctaaagt gccgcatggt tgatccagtg
      361 acaggaaacg cgtgggttcg acaggcgacc aatctctcag ttcttcgcca tcgactccga
      421 aaaggtcgaa agcaaagacc cgctcacacg tgcaagacat gttgggctcg gtgatttatt
      481 gcatgacggt gggcttatta ttgccgcggc gcaggtaagt gcgtcgcgct ataccaacat
      541 catggtcact accctgacaa aattacgctg ctacaacatc aagcagaaaa ggacttgacg
      601 tctatctcgc tcctgcgata tgggcgtgcg tcatgctcac ccatgtcgat tgtcgcagcg
      661 gccgcatgca cgacatgcac tgcgtcccgc gctgggcgca cgcggcgggg gccatgatgt
      721 tgtcggatct cgcccactcg gcgggcgcag taccggtgga tctgggccag gcgggacctg
      781 agttcgcggt cggttgcggc tacaaacagc gggacaaagt cacgtgacgc acatgcggcc
      841 gctggttgag tttccgcgcg acgcccggcg ggcggtgcgc tatgtgctga ccgatatcga
      901 cgacaccctg actgacggcg gccgtctcgg cgccaaggcc tatggggcgc tggaggccgt
      961 gagcgccgcc ggaatgaccg tcgtcgtcac cggccgtcca gcgggatggt gcgacatgat
     1021 cgcccgccag tggccggtga gcgccgtggt cggggaaaat ggcgcctgct acatgcgcta
     1081 cgacgccgct cgaggccgca tggaacgccg cttctggcgc gacggggcgg cgcgcgccgc
     1141 cgaccgcgcg cggctcaagg cgctgggccg gcgcatcttg cgcgaggtgc cgggaacggc
     1201 gctggcgtcc gaccagccct atcgcgaggc cgacctcgcc atcgactatt gcgaggacgt
     1261 gccgcccttg ggcccggagg cggtcgagcg catcttggcc cttttccgcg ccgccggcgc
     1321 cacggccaag gcaagctcga tccacgtcaa tggctggttc ggcgattacg acaagctggc
     1381 gatgactaag cggctgttcg ccgaggtctt tggcgtcgaa ttggacaggg cgcgggacaa
     1441 caccgtcttc gtcggcgaca gccccaatga cgagccgatg ttcagctatt tcctgaaagc
     1501 tgtaggggtg gcgaatgtac gccgcttcct gcctggcttg cgcaacccgc cgcgctgggt
     1561 gacacgggcc gaaggc
//
LOCUS       DATDHO010000522         2545 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_321855, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000522 DATDHO010000000
VERSION     DATDHO010000522.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321855"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..392
                     /locus_tag="VIY07_09995"
     CDS             <1..392
                     /locus_tag="VIY07_09995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019998387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6382120.1"
                     /translation="LAQMAERDGSPYDGVALQYTNPFTGGSVMPTIDCWIQMLRPGEQ
                     TKTHRHTGSIVYHVVEGSGWTVVDGKRFDWTTGDIFCLPPWVWHDHANASSRERAILF
                     SFADSPVLKAFDLYREEVYPENQGRQP"
     gene            complement(550..903)
                     /locus_tag="VIY07_10000"
     CDS             complement(550..903)
                     /locus_tag="VIY07_10000"
                     /inference="COORDINATES: protein motif:HMM:NF012264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY6382121.1"
                     /translation="MRKLASAALLALAASTVFAQESPPAGSADRGYRTYMKFMCYSCH
                     GTLGQGADRGAGPKLTPGLLPYPAFALQTRTPRLDMPPYRQQFLSDQELADIYAYLLT
                     IKPSPEAKDIPLLNF"
     gene            complement(918..2543)
                     /locus_tag="VIY07_10005"
     CDS             complement(918..2543)
                     /locus_tag="VIY07_10005"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY6382122.1"
                     /translation="MVNYGDNKKPEFLTCMHEESSVGMAQGYAKAAGKPMGMMAHGTV
                     GLQHAAMAVYNAWCDRVPVVMFAGNFLDAEKRRPGVEWYHCVQDPAALLRDFIKWDDQ
                     PLSLQHFAESVMRGYKIATTVPMGPVLITADGGLAEGPIYDEKKLRIPKLTVSIPPQG
                     DTGAVAEAAKMLAAAESPVILADRASRSQEGIKRLVELAEALNAPVIDIGGRMNFPTN
                     HYLCRSADRRSLVGQADVALLLEVADPWGQFNTVTDPYHEYRRLAKPDVKVIHISLGD
                     TLTKSNYQDMQRFMPVDLPISGDAQATLPALTEAVRNATTLVRRAALADRTAKLREDH
                     RRMKDRARAAASVGWDASPCSTAQMSAQLYNVIKNDKWCLAVSSVQWNRNLWPATEYY
                     NFIGGSGGAGQGYGAAAAVGAALANRDKGIVTVSIEGDGDLMYAPGALWTAAHHKIPL
                     LMVVHNNRAYHQEVMHLQKMAGLHNRRMDTAAIGTTIENPNIDYAKLAQSMGVWGEGP
                     ITNPTAIGPALSRALAVVKRGEPAVVDVVSQGR"
BASE COUNT          506 a          724 c          771 g          544 t
ORIGIN      
        1 gcctggcgca gatggccgag agggatggca gcccctacga cggtgtggcg ttgcagtaca
       61 cgaacccctt tacgggcggt tcggtgatgc cgaccatcga ctgctggatt caaatgttga
      121 ggcccggcga gcaaacgaaa acgcatcgtc acacgggaag catcgtttac catgtagtgg
      181 agggaagcgg ctggacagta gttgacggga agcgcttcga ttggacaacc ggagatatct
      241 tttgtctgcc gccgtgggtc tggcacgatc acgctaatgc ttcgagtcgt gaacgcgcga
      301 tcttgttttc gtttgcagat agcccggtgt taaaagcgtt cgacctctat cgcgaggaag
      361 tgtacccgga aaaccaaggg cgacagccat gaactgataa taccttagag tggattgttt
      421 atggcagatc ttcgcgcttg gctagctgac gttgatcaga tcggtcaatt gatgaccgtc
      481 gatggggttg actgggacct cgcgcgtagt cgaagcattc ctagggtttt tcggcagagc
      541 cgttatattt caaaagttaa gcaacggaat atccttggcc tccggtgacg gtttgatcgt
      601 caagaggtag gcgtagatgt cggcgagctc ttgatcgctc aaaaattgtt gccggtaggg
      661 gggcatatcg agccgcggcg tgcgtgtctg gagcgcaaag gctggataag gcaacagccc
      721 cggcgttagc ttgggtcccg ctcctcgatc agcgccctgg ccaagggtgc cgtgacagct
      781 gtagcacata aacttcatat aggtgcgata gcctcgatcg gcggagcctg ccggcggcga
      841 ttcctgggcg aacacagtgg acgcggccaa cgctaacaac gcggcagaag ctagcttgcg
      901 cattatcgtt cctcctctta gcgtccctga gaaactacat cgaccaccgc cggctcgcca
      961 cgctttacta cggcaagagc gcgggatagc gccgggccga tagccgtggg attagtgatc
     1021 ggcccctcgc cccagacgcc catggattgc gccagtttgg cgtagtcgat gttgggattt
     1081 tcgatggtcg tgccaatggc cgcggtgtcc atgcgacggt tgtgcaagcc ggccattttt
     1141 tgcaggtgca tgacttcctg gtgataggcg cggttgttat gcaccaccat caaaagcgga
     1201 atcttgtgat gtgccgcagt ccagagcgcg cccggcgcat acattaagtc cccgtcgccc
     1261 tcgatggaga ccgtgactat gcccttatcc cggttggcga gagccgcgcc gacggccgca
     1321 gccgcgccat agccctgccc ggctcctccg gaaccaccga tgaaattata atattccgta
     1381 gccggccaga gattccggtt ccactgcacg ctggacacgg cgaggcacca tttgtcgttc
     1441 ttgataacat tgtacagctg cgccgacatc tgcgccgtgc tacaggggct tgcatcccaa
     1501 ccaacactag ctgccgcccg tgctcgatcc ttcatgcgtc gatggtcttc gcgcagtttc
     1561 gccgtgcgat cggcgagggc tgcgcgccgg accagggtcg tggcatttct gaccgcttcg
     1621 gttaatgccg ggagcgtcgc ctgggcatcg ccggagatcg gcagatccac cggcataaag
     1681 cgctgcatat cttgataatt cgatttcgtc agtgtgtctc ccagagaaat gtggatgact
     1741 ttaacgtcgg gcttagcaag ccgccggtat tcgtggtacg ggtccgtgac ggtattgaac
     1801 tgaccccagg gatctgcaac ttcgagcaac aaggcgacat cggcttggcc cacgagcgag
     1861 cgacggtctg cgctgcggca gagataatgg ttggtgggaa aattcatgcg gccgccgata
     1921 tcgatcaccg gagcatttaa ggcctcggcg agctccacga gccgcttgat gccttcctgg
     1981 gaacgagagg cgcggtcggc caaaatcacc gggctttcgg ccgcggcaag catcttggcc
     2041 gcttcggcaa ccgcaccggt gtcgccctgc ggcgggatcg agacggtgag cttgggaatg
     2101 cgtaattttt tctcatcata gatcggccct tccgccaagc cgccgtcggc agtaatcagc
     2161 acaggtccca tgggcaccgt ggtggcgatt ttgtagcctc gcatgactga ttcggcgaag
     2221 tgttgcagtg acaacggctg atcatcccac ttgataaaat cgcgcagcaa cgccgctgga
     2281 tcttggacgc agtgatacca ctccacccct ggtcggcgct tctcggcgtc gagaaaattg
     2341 cccgcaaaca tgacgaccgg gacgcggtcg caccaggcgt tgtacacggc catcgccgca
     2401 tgctgcaaac ccacggtgcc gtgcgccatc atgcccatcg gcttgccagc ggccttggca
     2461 tagccttgcg ccatgccgac ggacgattcc tcatgcatgc aagtcaggaa ttccggcttc
     2521 ttattgtcgc cgtagttgac gatcg
//
LOCUS       DATDHO010000523         1609 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_321859, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000523 DATDHO010000000
VERSION     DATDHO010000523.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1609
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_321859"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..709)
                     /locus_tag="VIY07_10010"
     CDS             complement(<1..709)
                     /locus_tag="VIY07_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY6382123.1"
                     /translation="MDWDKLKVFHAAAEAGSFTHAGERLGLSQSAVSRQVSALETELA
                     VSLFHRHARGLILTEQGELLYRTAHEVFMKLEAARTKLTDSRERPNGELKVQTTPGIG
                     VHWLTPRLDEFLDLYPDIHITLITSEEELDLAMREADVAIRLRQPTQPDLIQRKLFSV
                     HFHAYASPDYLKRFGTPRAHEELDKHRIVLLGGGMVPAHLQNRRWLLEIGRDGKDART
                     PHLTVNNVLGVLRACQRG"
     gene            complement(735..>1609)
                     /gene="trxB"
                     /locus_tag="VIY07_10015"
     CDS             complement(735..>1609)
                     /gene="trxB"
                     /locus_tag="VIY07_10015"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEY6382124.1"
                     /translation="PLLVTGMQPGGQLTITTDVENYPGFAEIIQGPWLMEQMQKQAEH
                     VGTRIVTDHVNKVELSQRPFKLICDSGDVYLADALIIATGAQARWLDLPSEQKFKGYG
                     VSACATCDGFFYRNKEVIVVGGGNTAVEEALFLTNFASKVTIVHRRDAFRAEKILQDR
                     LFKNPKIEVIWDTVLEDVTGSDNPLKVSGVRLKNVKTGAITERRVDGVFIAIGHQPAS
                     ELFVGQIQMKPSGYIITRGNSTATSVPGVFAAGDVTDDIYRQAVTAAGQGCMAALEAE
                     KFLAAHEHQRAAAE"
BASE COUNT          281 a          477 c          517 g          334 t
ORIGIN      
        1 gtccgcgttg gcatgcgcgc aagacgccaa gcacgttgtt gacggtgaga tgtggcgtgc
       61 gggcatcctt tccatcgcgg ccgatctcaa gcagccagcg gcggttctgc aagtgcgcag
      121 gtaccatgcc gccgccaaga agtacgatgc gatgcttgtc gagttcttcg tgcgcccgcg
      181 gtgtgccgaa tcgcttcaga tagtcaggcg acgcgtaggc atggaaatga accgaaaaca
      241 gcttgcgctg gatcaggtcg ggctgcgtcg gctgcctcag ccggatggcg acatcggcct
      301 cgcgcatcgc caggtccagc tcctcctccg aggtgatcag cgtgatgtgg atgtccggat
      361 agagatccag aaactcatcg agccgcggcg tgagccaatg caccccgatg cctggagtgg
      421 tctgtacctt cagctcgcca ttcggccgct cccggctgtc ggtgagcttg gtgcgggccg
      481 cttcgagctt catgaagact tcgtgcgcgg tgcggtagag cagttcgccc tgctcggtga
      541 gaatcagtcc gcgcgcatgg cgatgaaaca gggataccgc gagctctgtt tccaaagccg
      601 atacctgccg tgacaccgca gactgcgaaa gtccgaggcg ttcgccggcg tgcgtgaacg
      661 agccggcttc ggctgcggcg tgaaacacct tcagcttgtc ccagtccatc gtggaattcg
      721 gtgtcggcat tggtctattc ggccgccgcg cgttgatgtt cgtgcgcggc caggaatttc
      781 tccgcttcaa gggcggccat gcagccttgg cccgccgcag tgacagcctg ccggtaaata
      841 tcgtcggtga cgtcgccggc ggcgaaaacg ccgggcaccg aggtcgctgt cgaattgcct
      901 ctggtgatga tgtatccgga cggcttcatc tggatctgcc ccacaaacag ctctgatgcc
      961 ggctggtggc cgatcgcaat aaagacgcca tccacgcggc gttcggttat ggcgccggtc
     1021 ttgacgtttt tgagccggac accgctgact ttcagggggt tgtcgctgcc agtgacgtcc
     1081 tcaagcacgg tgtcccagat cacttcgatc ttgggattct tgaacagacg gtcctgcaga
     1141 attttttcgg cgcggaatgc gtcgcgccgg tgcacgatgg tgaccttcga ggcaaagttg
     1201 gtgaggaaca gcgcctcttc gacggcagta ttgccgccgc cgaccacgat cacttccttg
     1261 ttgcgataga aaaagccatc gcatgtcgcg caggccgaca cgccgtagcc cttgaacttt
     1321 tgctccgagg gcagatcgag ccagcgcgcc tgcgcgccgg ttgcgatgat aagcgcgtcg
     1381 gcgaggtaga cgtcgccgga atcgcaaatc agcttgaagg gccgctgcga caattccacc
     1441 ttgttgacgt ggtcggtgac gatgcgggtg ccgacatgct ctgcctgctt ctgcatctgc
     1501 tccatcagcc aggggccctg gatgatttcg gcgaagccgg ggtagttctc gacgtcggtg
     1561 gtgatcgtca gctgaccgcc gggctgcatt ccggtgacca gcagcggct
//
LOCUS       DATDHO010000524         1810 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_272971, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000524 DATDHO010000000
VERSION     DATDHO010000524.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_272971"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            292..411
                     /locus_tag="VIY07_10020"
                     /pseudo
     CDS             292..411
                     /locus_tag="VIY07_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401235.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase"
     gene            528..1454
                     /locus_tag="VIY07_10025"
     CDS             528..1454
                     /locus_tag="VIY07_10025"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6382125.1"
                     /translation="MPAGPAQDPGWPTKPVTFIVPFPPGGSVDPLARLVGSRLTVALG
                     QQFIVDNRPGGSGSIGAAAAARANPDDYTFLFVFDTHAVNPTLIPKLPFDTTKDLVPV
                     MLVGTAPMAIVTNPSKPYKSFADVIKAAKAKPDTLTYGSIGSGSLGHLTMKLFEQAGG
                     FVAVHVPYKGGGPMIVDATAGHIETGIASVSVLTPHVKGGKLRAVAVTGDKRSHALPD
                     VPALAEQGFPGFSALAWWGIFATAGTPKPILDKFHAELVKTFNLPDVRGQLADTLGMD
                     LVVSSPEALQKFLLAEMARWGKVVREHNIRGD"
BASE COUNT          392 a          549 c          511 g          358 t
ORIGIN      
        1 gatagaccgc cccagagaat tgaatccgta gtggacgagc catggggaaa acctagcaga
       61 aacatccacc aattagttaa gcaaaagacc cctaccattg cagcgatatc agacctcctt
      121 cccttcgata gagttatccg ccccgtgatc gtccccaatg acggcgtaat cggctcggac
      181 gattgaatta ttcgaacctg tctagcaatc aacttggagc gcggttgcac ttgcaaccga
      241 atcggcgaga agaataagtc aatactcagg cacgacccca atgcctcgac ccctttggag
      301 gactaccatc aggactatta caaaaagaat tcgatccgct ataaaattta ccgctgtggc
      361 tgcgggcgcg atcagcgact cgaagagctt tggggatcgg cgaaagagta aggcactcaa
      421 tgctagcggc gctgcgatga ccgatgatag aaggtgaatt atgatccgtt caaaattttt
      481 attttgtggc cctggtgtgt atcgctgcgg ctggcgcgcc tgcgccattg ccggcaggtc
      541 ccgcgcagga tcccggctgg cccaccaaac cggtgacgtt catcgtccct ttcccaccag
      601 gtggctcggt tgacccgctc gcacgcctgg ttggctcgcg gctcaccgtg gcgctcggcc
      661 agcagttcat tgtggacaac cggccgggtg gctcgggttc gatcggcgcg gcggctgccg
      721 ccagggccaa ccccgacgac tacacgttcc tgttcgtctt cgacacccat gcggtcaacc
      781 ctacgttaat cccgaagctg ccctttgata cgacgaaaga cctcgtcccg gtaatgctgg
      841 tgggcaccgc gccgatggcc atcgtcacca atccgagcaa gccctacaag agcttcgctg
      901 acgtgatcaa ggcggcgaag gcgaagccgg acacgctaac ctacggttcc atcggcagtg
      961 gcagcctcgg ccatctcacg atgaagctgt tcgagcaggc tggaggcttc gtggccgtgc
     1021 acgtgccata caagggcggc gggccgatga tcgtggacgc gaccgccggc cacatcgaaa
     1081 ccggcattgc ctccgtttcc gtactcaccc cgcacgtgaa gggcggcaag ctgcgggccg
     1141 tagccgtcac cggagacaag cgctcgcacg cactgcccga tgtcccagcg ctggcggagc
     1201 agggctttcc cggattctcg gcgctcgcgt ggtggggcat ctttgctacg gccggcacac
     1261 ccaagcccat cctggacaaa ttccatgcgg aactcgtgaa gactttcaac ctgcccgacg
     1321 tgcgcgggca gctcgccgat accctcggca tggacctcgt cgtgagcagc cccgaggcgc
     1381 tgcagaaatt tctcctcgcc gagatggcgc gctggggaaa agtggtgcgc gagcacaaca
     1441 taagaggaga ttgaggcgta gtccgttaac gaagcgcctc gtctcagcga gcttgccgcg
     1501 ttcgatgctc aagcgctcaa gttcatccct aaatttcgga tcataagtcg cggcagcatt
     1561 ttcgttagtt gaaccttccc aactttcaca ccaagttcgc gtcaaattca ccgtctgtta
     1621 acttttcgcc gacaaattta ctttgtggcg caaagatcaa cgcggtgtcc ggtgagcggg
     1681 tgtcgggcgg tgcggatgac tctgggcaac ataattatcc atctcaatga tgaccacggc
     1741 tggtcccgtg aacggatcgc cctcgaagtt gtcaggccca acgaggaaca agcagaacca
     1801 ggaagctcgc
//
LOCUS       DATDHO010000525         2281 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_173486, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000525 DATDHO010000000
VERSION     DATDHO010000525.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173486"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..475)
                     /locus_tag="VIY07_10030"
     CDS             complement(<1..475)
                     /locus_tag="VIY07_10030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6382126.1"
                     /translation="MRSNKFIALSAVLFTAAFSATAVAQAPAQQQPMFAATKVEGTDN
                     VYIFRYQNHQAMFIVTPAGVIVTDPISYGRPQAAKAYLEEIRKITQAPIKYLIYSHHH
                     YDHIAGGKVFKDAGATVVSHRRAKERLAQLKPTDVVGPDQVVDGKRTIKLGGTTLD"
     gene            603..1472
                     /locus_tag="VIY07_10035"
     CDS             603..1472
                     /locus_tag="VIY07_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HEY6382127.1"
                     /translation="MRSLLFVPADGGSKLDKAVASGADAVIIDLEDSIAPERKDTARA
                     AALSFLKRHSAAGERPRLLVRINGLDTGMTDADLDAIVEGTPDAVVFPKAEGATSVVH
                     LDAKLTAREAIAGVPEGHIKILAQAVETAAGLFAAGTFRGASARLIGLTWGPEDLSAE
                     LGAAANRGTDGALTEPYRLARSLCLYAAAAANLPAIETVFVDFRNSEGLRRDTEVARR
                     DGFTGRLAIHPAQVPIINEVFTPTSAEIEKAKAVVAAFAAQPGVGAVGIEGKMYDRPH
                     LVRAQALLARYGG"
     gene            complement(1495..1926)
                     /gene="hisI"
                     /locus_tag="VIY07_10040"
     CDS             complement(1495..1926)
                     /gene="hisI"
                     /locus_tag="VIY07_10040"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEY6382128.1"
                     /translation="MSSAHDLEESLAFTPKFDANGLITAVVTDAKSGDVLMVAHMNEE
                     ALRKTIASGEAWYFSRSRKALWKKGETSGHVQHVVELRVDCDQDAVWLRVDQQGAGAC
                     HTGRRSCFYRAVPLGKSGAAALEFRDADKTFDPDLAYKPKR"
     gene            complement(1993..>2281)
                     /locus_tag="VIY07_10045"
     CDS             complement(1993..>2281)
                     /locus_tag="VIY07_10045"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GTP cyclohydrolase I"
                     /protein_id="HEY6382129.1"
                     /translation="VDRVVGLSKLARLVDVYARRLQTQEHLTSQVATAIDEILKPRGV
                     AVMIEAEHMCMSLRGVEKPGALTVTTHFTGAFRDDPAEQVRFMTMLRGSQR"
BASE COUNT          443 a          700 c          699 g          439 t
ORIGIN      
        1 ggtcaagagt ggtgccgccg agcttgatcg tgcgcttgcc gtcgacgacc tgatcgggac
       61 cgacaacgtc ggtgggcttg agttgcgcaa gccgttcctt ggcgcggcga tgcgaaacga
      121 cggtggcgcc ggcatccttg aagactttgc cgccggcgat gtggtcgtaa tggtgatggc
      181 tgtagatcag atatttgatc ggcgcctggg taatcttgcg gatctcttcc agataggctt
      241 tcgcggcctg cggccgcccg tagctgatcg gatcagtgac gatgacaccg gcgggcgtga
      301 caatgaacat cgcctggtgg ttctgatacc ggaatatgta gacgttgtcc gtgccctcga
      361 ccttggtggc cgcgaacatc ggttgttgtt gggccggagc ttgcgccacc gcggtggctg
      421 aaaaagcggc ggtgaacaga acagccgaaa gtgctatgaa cttgttactt ctcattgggt
      481 gatacctccc cgcgcattta accccgagat actgccgaaa ttccagcgcc aaaaccgcgc
      541 atccccgagg catttgagct aaattccgaa acctcaacaa aaacatcagc aaggactgct
      601 atatgcgctc tctcttgttc gtccccgcag acggcgggtc aaaactcgac aaggcggtcg
      661 cgagtggcgc ggatgctgtc atcattgatc tggaggactc aatcgcgccg gagcgaaagg
      721 ataccgcccg cgccgccgca ttgtccttcc tcaaacggca ttccgccgcc ggtgaacgac
      781 cgcgccttct tgtgcgcata aatgggctgg ataccggaat gacggacgcc gacctcgatg
      841 caatcgtcga aggcacaccc gacgccgttg tcttccccaa ggccgagggg gcgacaagcg
      901 tggtgcatct cgatgcgaag ctgaccgcgc gcgaggcgat cgcgggcgtg ccggaaggcc
      961 atatcaaaat tctcgcgcaa gcggtggaga cagcggcagg cctgttcgcc gccggaacgt
     1021 tccgcggcgc aagtgcgcga ttgatcgggc tgacctgggg gccggaggac ctttcagctg
     1081 aattgggcgc cgcggccaac cgcggcaccg atggcgcctt gaccgagcct tatcgtctgg
     1141 cgcgatcgct gtgtctctac gccgccgcgg ctgcaaacct gcccgcgatc gaaactgtgt
     1201 tcgttgattt tcgcaactcg gaaggattgc gccgcgacac tgaagttgcc cgacgagacg
     1261 gattcacagg acgtctcgcg attcaccctg cgcaggtgcc catcatcaat gaggtgttca
     1321 caccgacgag cgccgagatc gagaaagcca aggccgtggt ggccgccttt gccgcgcagc
     1381 ccggtgtcgg cgcggtcggg atcgagggca aaatgtacga ccgcccgcac ctcgttcgcg
     1441 ctcaggcgct gcttgcgcgt tacggcggct agcccaaccg cgcaaatcgt cggcttaacg
     1501 cttcggcttg taggccaaat ccggatcgaa ggttttgtcc gcgtcgcgaa actcgagcgc
     1561 agccgcgccg ctcttgccga gcgggaccgc acggtaaaag cacgagcgcc ggccggtatg
     1621 gcacgcgccg gcgccttgct ggtcgaccct gagccagact gcgtcctggt cgcaatcgac
     1681 ccgcaattcg accacgtgtt gaacgtggcc ggacgtctcg cctttcttcc acagcgcctt
     1741 gcgagagcgg ctgaaatacc aggcttcgcc gcttgcgatg gttttgcgaa gggcttcctc
     1801 attcatgtgc gcaaccatca gcacgtcgcc cgatttcgca tcggtgacaa ctgccgtgat
     1861 caggccattg gcgtcgaatt tgggcgtgaa cgccaggctc tcttcgagat catgcgcgga
     1921 tgacaaggac ggctcctgcc tgtgcgcgga gcacagcttc aatcgctagc aaatgcaaca
     1981 gactgataga atttaccgct gcgaaccgcg caacatggtc atgaaacgca cctgctcggc
     2041 ggggtcatcg cgaaacgcac ccgtaaagtg tgtggttacc gtgagagcgc cgggcttctc
     2101 gaccccacgc agcgacatgc acatgtgctc tgcttcgatc atgaccgcga caccgcgggg
     2161 tttcaggatt tcgtcaatcg ccgtcgcaac ctgcgatgtc agatgttcct gcgtctgcaa
     2221 cctgcgcgca taaacgtcga ccaggcgcgc gagcttcgac agacccacaa cgcgatcgac
     2281 c
//
LOCUS       DATDHO010000526         1746 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_124610, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000526 DATDHO010000000
VERSION     DATDHO010000526.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_124610"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..544)
                     /locus_tag="VIY07_10050"
     CDS             complement(<1..544)
                     /locus_tag="VIY07_10050"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEY6382130.1"
                     /translation="MKQAIGTCVGDNCSVAIEGFTGFICFAAGHEIIRQRRRNLTLIR
                     MTPDLIYDQMIAAGTASKLIFSYMGNPGVGSLYCIRRAVEKAIPCPLELEEYSHYGLV
                     GRYAAGAARLPFFALRSYLGSDMLVANPLIKLIEDPYGTGKIAVVPPLNPDVAILHAQ
                     RADRQGNTQLWGLLGMQKEIA"
     gene            complement(555..1736)
                     /locus_tag="VIY07_10055"
     CDS             complement(555..1736)
                     /locus_tag="VIY07_10055"
                     /inference="COORDINATES: protein motif:HMM:NF012432.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase family protein"
                     /protein_id="HEY6382131.1"
                     /translation="MDLGSLGKETVRSGFPIIALVQQLRRLVGGQAASFVHWGATTQD
                     IMDTACVLQLRGASKLYKERIVELARHLSILANQHRATVMAARTHGQQALPVSFGLKV
                     ASWLAPLIRHAERLDEISPRLLVVQFGGAAGTLAALGKQGLAVMQGLADELKLAAPAM
                     PWHAQRDSLVEFAGWLSLVTGSLGKMAQDIILLAQTEVGEVSESAEEGRGGSSTMPQK
                     SNPITSELILAAARSNASLLSALHQAQIQEQERATHGWQVEWLTLPEMLMLTGGALKH
                     ALYLAKNLQVDEAKMRQNIQRANDVILAEAAVFALAQAMPRAQADELVKRACAVALSE
                     GKPLVELVKNLAAGTVPAGAVDWQILAAPENYLGETAKIIDRVRKNASILRGEEIGKQ
                     R"
BASE COUNT          328 a          540 c          496 g          382 t
ORIGIN      
        1 acgcgatttc tttttgcatg ccgagcagcc cccacagttg tgtgttgccc tgccggtcgg
       61 cgcgctgcgc gtggaggatg gcgacatcgg gattaagcgg cggcacgaca gcgatcttcc
      121 cggtaccgta ggggtcctcg attaatttga tcagcggatt ggccacgagc atgtcggagc
      181 ccaagtagct tctcagagcg aaaaacggca gccgcgccgc gcccgccgca taacgcccga
      241 ccaggccgta gtgtgaatac tcctccagct ccagcggaca aggaatggcc ttttccacgg
      301 cgcggcggat gcagtagagt gagccgacgc cggggttgcc catgtagctg aatatcaatt
      361 tgctcgccgt gcccgcggcg atcatctggt cgtagatcag gtccggcgtc atgcgtatca
      421 acgtcaggtt gcggcgccgc tgacggatga tttcgtggcc cgcggcaaag caaatgaatc
      481 ctgtgaaccc ttcaatggcc acggaacagt tgtcgccaac gcaggtgccg atggcttgtt
      541 tcatggacac gagcttatcg ttgtttgcca atttcttcac cccgcaagat gcttgcgttt
      601 ttgcgcaccc ggtcaatgat ttttgccgtc tcgcccagat agttctcggg cgcggccaat
      661 atctgccagt cgaccgcccc ggctggtacc gttccagcgg ccaaattttt caccagttcg
      721 accagcggct ttccttcgga cagcgcaacc gcgcacgccc gcttgaccaa ttcgtccgcc
      781 tgagcgcgcg gcatcgcctg cgccaaagca aacaccgcgg cttcggcgag aatgacatca
      841 ttggcgcgtt gaatattctg gcgcatctta gcttcgtcca cctgcaggtt cttcgccaga
      901 tagagggcat gcttcaacgc gccgccggtc agcatgagca tttccggcag ggtcagccac
      961 tccacttgcc agccgtgagt cgcgcgttct tgctcctgaa tctgcgcctg gtgcagggcc
     1021 gataatagag atgcgttgct gcgcgccgct gccaggatca actcgctcgt gatgggattg
     1081 cttttctgcg gcatggtact gctgccgcct cgcccctctt cggccgattc ggatacttcc
     1141 ccaacctcgg tctgcgccag caagatgata tcctgggcca tttttccgag actgcccgtc
     1201 accaggctga gccatccggc aaattcgact aaactgtcgc gctgcgcatg ccacggcatc
     1261 gccggggcag ccagtttaag ctcatcagca agtccttgca tgaccgcaag cccttgtttg
     1321 ccaagggcgg cgagagtccc tgccgctcca ccaaattgca ccaccagcag tcgcggcgaa
     1381 atttcgtcca gtctctcagc atgacgaata agcggtgcaa gccagctcgc aactttcaat
     1441 ccgaagctta cgggcagagc ctgctgcccg tgagtccgcg cggccatgac cgtagccctg
     1501 tgctgatttg caagtatgct tagatggcga gcgagttcga cgattctctc tttgtatagt
     1561 ttgctggcac cgcggagctg aagcacgcag gcggtgtcca taatgtcctg tgtcgtggcg
     1621 ccccaatgca cgaaagaagc ggcttgcccg ccgacgagcc gtcgcagttg ctgaactagc
     1681 gcgatgattg gaaatccgga ccggaccgtt tctttgccta acgacccgag atcgattttg
     1741 tttgga
//
LOCUS       DATDHO010000527         6210 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_173553, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000527 DATDHO010000000
VERSION     DATDHO010000527.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6210)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6210)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6210
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173553"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(52..789)
                     /locus_tag="VIY07_10060"
     CDS             complement(52..789)
                     /locus_tag="VIY07_10060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEY6382132.1"
                     /translation="MSAPLTNSIPRHAMVLAAGLGTRMRPITDSTPKPLVKISGKPLI
                     DHVLDRLDEAGVERAVVNVHHMADQIRKHLSQRRRPEIVISDERGELLGTGGGVKKAL
                     PELGGAPFFHVNSDTIWMEGVKPNLARLAQAFDPAAMDALLLLAPVAGSIGYSGRGDF
                     AMAPDGRLRRRAAHEIAPFVYAGAAILAPALFDGAPEGNLSLTALFERAAQAQRLHGL
                     RLEGLWMHVGTPEAIAEAESAIRASAG"
     gene            complement(793..2328)
                     /gene="tsaE"
                     /locus_tag="VIY07_10065"
     CDS             complement(793..2328)
                     /gene="tsaE"
                     /locus_tag="VIY07_10065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEY6382133.1"
                     /translation="MFFSSSGGYSFATTLADEAATYRLMTDVAAVLEPGDVITLSGDL
                     GAGKTTFARALIRYLAGDDTIEVPSPTFTLTQTYSLPGFTVVHADLYRLSGAGELAEL
                     GLEDAPEGAVTLVEWPDRATGFLPSNRLDIALTLEPQHGPTARSVRITGYGSVTGRTE
                     RILTIRRFLDRADFGRASRRRIQGDASTRSYERLTREGATYVLMNSPKRPDGPPVRNG
                     KPYSAIAHLAENVTPFVAMTQALRRQGLSAPAIFASDRETGLLVIEDLGKELVVGGEP
                     PAPIEMRYEAATDLLAELHCEQLPTVVPVEPGIDYRLPLYDLDAFLIEVELLLDWYLP
                     KLDVKISGGKRDGYRALWREALMPILAGPHTWVLRDFHSPNLLWLPEREGTSRIGLLD
                     FQDAVIGPEAFDVASLLQDARVDVSEGLEMKLLSRYTRARLAANATFDTPAFARAYAT
                     LGAQRASKILGIFARLERRDRKPQYLRHLPRVWTYLQRSLAHPALAPLAAWYRANVPP
                     LKV"
     gene            complement(2406..4922)
                     /locus_tag="VIY07_10070"
     CDS             complement(2406..4922)
                     /locus_tag="VIY07_10070"
                     /inference="COORDINATES: protein motif:HMM:NF024267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEY6382134.1"
                     /translation="MPETIRTANERLRSRPWRGGLLATFVTANFILSDSAAGAEAHFG
                     AAAIDAIHRTMAILRGQGISLLTFILAVIGLGLLASVILLRARRSKDRIESAARDEII
                     ALQAEADRLKTLLLSEPQILVTWAAASEQPDITGETSIVAPGATAERVLAFGTWLEPA
                     AARRLEQAVDTLRVNGRGFVMTLTTRAARPVQAEGRAIGGRAVLRLCDVSGIEQELLD
                     LAARHDQLLTDVETLRALLDSLPAPAWVRDNAGQLTFVNSAYARAVEAHNPDDAVARR
                     LELLDQTVRAEMAHARTAAGTYTGRLPAIAAGGRRIFEVIDAPGTIGSSGIAIDRTEV
                     EVMRAELARMAEAHRRVLDQLATGVAVFNVDRKLTFYNAAFRSLFELDAGFLDQSPTD
                     AAVLEILRGKRKLPEEQDFRLWKQQLYEAYRAVEAKEHTWHLPDGRTLRVVTTPNPEG
                     GVTYLYDDVTERLDMYRRYDALIKVQRETLDHLAEAVAVFGSDGRVRLHNPAFQRMWK
                     LSHDALEQRPHAEAVTAWCQALHDDNAVWRNLRAAVTAIDNREPLAARIERRDGSVLD
                     LATMPLPDGATLVTFQDRTDTVNVERALRERNEALEAADSIKVDFVHHVSYELRSPLT
                     NIIGFANLLGDPAFGALTRKQSEYLGYITASTNALLALINNILDLATIDAGAMTLNLG
                     EVDIQASMQAAAEGVQDRLVKNRIRLDIRAPANIGSLTADERRLRQILFNLLSNAVGF
                     SPPGETVTLLAERRRDAVFFRVTDHGPGIPPEAMDKVFDWFETDSMGSQHRGPGLGLS
                     LVRSFVELHGGSVTIDSAPGRGTIVTCAFPVEQVAKQTAA"
     gene            complement(5055..5492)
                     /locus_tag="VIY07_10075"
     CDS             complement(5055..5492)
                     /locus_tag="VIY07_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEY6382135.1"
                     /translation="MALVSRKGILAIAAVIDVAINARTRPVSAKALAARHRLPPRHLE
                     PVLQALVRDGILRGIRGPHGGYELGRERNRITADDILRAATTVDEVDALPPNSALVNE
                     VVWPALAETERTVSVALGRISIDDMVRRISIDGMVRRTTAAAK"
     gene            complement(5582..6010)
                     /gene="dut"
                     /locus_tag="VIY07_10080"
     CDS             complement(5582..6010)
                     /gene="dut"
                     /locus_tag="VIY07_10080"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011583370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEY6382136.1"
                     /translation="MMRLTHSEGLSLPDYQTAGAAGLDLFAAIPKPLTLRAGARALVP
                     TGIAIAVPEGYEGQVRPRSGLATRHGLTILNAPGTIDADYRGEIQVVLANLGNEDVTI
                     TRGMRIAQLVIAPVARAQIVEVMSLEETVRGSGGFGSTGS"
     gene            complement(6028..>6210)
                     /locus_tag="VIY07_10085"
     CDS             complement(6028..>6210)
                     /locus_tag="VIY07_10085"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389348.1"
                     /note="catalyzes the conjugation of cysteine to
                     4'-phosphopantothenate to form
                     4-phosphopantothenoylcysteine, which is then
                     decarboxylated to form 4'-phosphopantotheine; in the
                     alphaproteobacteria, this protein contains an N-terminal
                     SbtC-like domain; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate synthase"
                     /protein_id="HEY6382137.1"
                     /translation="GCDWILANDVSPQSGVMGGDRNTITLVRASGAEAWPPQSKDEVA
                     AMLVARIGDALKGEKQ"
BASE COUNT         1226 a         1914 c         1908 g         1162 t
ORIGIN      
        1 atcgcggtga atgatacatg ctttgggccg ctggcgaatc ccggcccgat gctaccccgc
       61 gctggcgcga atcgcggatt ctgcttcggc aatggcttcc ggcgtgccga cgtgcatcca
      121 caagccttcg agtcgaagac catgcagccg ctgcgcttgt gcagctcgtt cgaagagtgc
      181 cgtgagcgaa aggttccctt ccggcgcgcc gtcgaaaagc gcaggcgcca ggatcgccgc
      241 cccggcatag acgaatggag cgatctcatg cgcggcgcgc cggcgcagcc gcccgtcggg
      301 ggccatggca aagtcgccgc gcccggaata accgatgctg ccggcgaccg gagcaagcag
      361 tagaagcgca tccattgcag cagggtcgaa ggcttgcgcg aggcgcgcga ggttgggctt
      421 taccccttcc atccagatcg tgtccgaatt gacgtgaaaa aacggtgcgc caccaagttc
      481 cggcaaggcc tttttgacgc cgcctccagt gccgagcagt tcaccgcgct cgtcggaaat
      541 cactatctcg ggtcggcgtc gctgagacag atgtttccgt atctgatcgg ccatgtgatg
      601 cacgttgacc accgcgcgtt cgactcctgc ctcgtcaagg cggtcgagca catgatcgat
      661 gagcggctta ccggaaattt tcaccagcgg cttcggcgtt gaatccgtga tcgggcgcat
      721 gcgcgtgccg agtcccgccg cgaggaccat cgcgtgacgc ggaatggagt ttgtcagtgg
      781 tgcagacatg catcagactt tcagcggcgg gacgttggct cgataccagg ctgcgagcgg
      841 cgcaagcgcg ggatgtgcca gcgaacgctg caaatacgtc catacgcggg ggagatgacg
      901 cagatattgc ggcttgcggt cgcgccgctc aagtctcgcg aagattccca ggatcttgga
      961 tgcgcgctgt gccccaaggg tcgcataggc gcgcgcgaac gctggcgtgt caaatgtcgc
     1021 attggcagcg agacgcgcgc gggtgtaccg ggacaggagc ttcatctcca gcccctccga
     1081 cacatccacg cgggcgtcct gcaacaacga ggcgacatca aaggcttcgg gccctatcac
     1141 ggcatcctga aaatcgagca ggccaatgcg ggaagtcccc tcacgctcag gcagccacag
     1201 gagatttggg gaatgaaaat cgcgcaaaac ccaggtgtgc gggccggcca ggatcggcat
     1261 cagggcctcg cgccacagcg cgcgatagcc gtctcgtttg ccgccggaaa tttttacgtc
     1321 aagcttgggg agataccagt cgagcagcag ctcgacctcg atcaaaaacg catccaggtc
     1381 gtagagcggc agccgatagt cgatgcccgg ctcgactggg acaacggtcg gcagctgctc
     1441 acaatgcagt tcggcaagca gatctgttgc ggcctcataa cgcatttcaa tcggcgctgg
     1501 tggctcgccg ccgacaacga gctccttgcc gagatcctcg atcaccagca gtccggtctc
     1561 ccggtctgat gcaaaaatgg caggcgcaga cagcccctgc ctgcgcaagg cctgagtcat
     1621 cgcgacaaat ggagtgacgt tttcggcaag atgcgcaatt gcgctgtagg gcttgccatt
     1681 gcgcacaggg gggccatccg gtcgcttggg cgagttcatg aggacgtagg tggcgccctc
     1741 gcgcgtcagc cgttcgtaac tccgcgtcga ggcgtcaccc tggatccgcc ggcgggaagc
     1801 gcgaccaaaa tctgcccgat cgagaaagcg ccgaatcgtc aggatgcgtt cggtgcgccc
     1861 ggtaacactg ccgtacccgg tgatgcgcac gctccgtgca gttggtccgt gttgtggctc
     1921 aagcgtcagg gcgatatcga gccggttgct cggcaaaaac cccgtggcgc gatccggcca
     1981 ttccaccagt gttacggcac cttcgggtgc atcctcgaga ccgagttcgg ccaactcacc
     2041 cgccccagac agccgataaa gatcggcgtg cacaaccgtg aagccgggca agctgtaggt
     2101 ttgcgttaat gtaaaggtcg ggcttggcac ctctatcgtg tcgtcgccgg cgagatagcg
     2161 gatcagtgcg cgagcaaaag tggtcttgcc ggcgcccaga tcgcccgaca acgtgatcac
     2221 atcgccgggt tcgaggacag cagcgacgtc cgtcatcaat cggtaagtcg cggcttcgtc
     2281 ggctagtgtc gttgcgaagc tatagccgcc ggaactggag aaaaacatcg aatcatccgt
     2341 tacaagcccg cactttataa acggatgggg cggtcctgcg ccagaatgcc tgcggggata
     2401 agttgctacg ctgccgtttg ctttgcgacc tgttccaccg ggaacgcgca agtaacgatg
     2461 gtacctcgtc ccggcgcgga atcgattgtt accgatccgc cgtgcaattc gacgaaggac
     2521 cggacaagcg agagtccgag gcccggaccg cggtgctgcg atcccatcga atccgtctcg
     2581 aaccaatcga ataccttgtc cattgcctct ggcggaattc ccggcccgtg atcggtcact
     2641 ctgaagaaaa ccgcatcccg gcgtcgttca gccaagaggg ttacggtctc tccaggtggt
     2701 gaaaatccga cggcgttgga caacaggttg aacaggatct ggcgcaggcg ccgctcgtcg
     2761 gcggtcaagc tgccgatatt tgccggagcg cggatatcaa gcctgatacg gttttttacc
     2821 agccgatcct gcacgccttc cgcagctgct tgcatgctcg cctgaatatc aacctcgcca
     2881 agattgagcg tcatcgcccc ggcatcgatt gtggcgagat cgagaatatt attgatgagc
     2941 gccagcaacg cattcgtcga cgctgtgata tagccgagat attcgctctg ctttcgagtc
     3001 agggcgccga atgccgggtc gccgagtaaa ttcgcaaagc cgatgatgtt ggtcaggggc
     3061 gagcgcagtt cataagaaac gtggtgtacg aaatcgacct tgatcgaatc cgcggcctcg
     3121 agcgcttcgt ttcgctcccg gagcgcgcgc tcgacattga cggtgtctgt cctgtcctgg
     3181 aacgtgacga gcgttgcccc gtcaggcaaa ggcatggtgg caagatcgag aacggatccg
     3241 tcacgccgct cgatgcgcgc agccagaggc tcccgattgt cgatcgcggt tacagcggcg
     3301 cgaagatttc gccaaaccgc attgtcatcg tgcagggcct ggcaccacgc agtcacggct
     3361 tcggcgtggg gtcgttgctc aagcgcatcg tgcgacagct tccacatgcg ctggaaagca
     3421 ggattgtgca agcgaacgcg accgtcgctg ccaaacactg ccacagcctc ggctaggtga
     3481 tcgagcgtct cgcgctgcac cttgatgagc gcatcgtagc ggcggtacat gtcgagccgc
     3541 tcggtcacgt cgtcatacaa atacgtgacc ccaccctcgg gattgggtgt ggtgaccacc
     3601 cgcagagtgc ggccatccgg cagatgccag gtgtgctcct tcgcctcgac agcgcggtag
     3661 gcctcgtaga gctgttgctt ccacagcctg aagtcctgtt cttccggcag cttgcgcttg
     3721 ccgcgcaaga tttcgagcac ggccgcgtcg gtcggcgatt gatcaagaaa gcccgcgtca
     3781 agctcaaata acgagcggaa cgccgcatta tagaaagtga gcttgcggtc gacgttaaag
     3841 acggcaactc cggttgcgag ttgatcaagt acgcggcggt gcgcttcggc catgcgcgcg
     3901 agttctgcgc gcatgacttc tacctccgtg cgatcgatcg cgatgcccga actgcctatc
     3961 gttcccggcg catcaatgac ctcgaaaatt cggcggcctc ctgccgcaat cgcgggaagc
     4021 ctgccggtgt aggttccggc ggctgttcgg gcgtgggcca tctccgcccg caccgtctgg
     4081 tcgagcaatt ccagccgccg cgcgacagca tcgtccggat tgtgagcttc aacggcgcgc
     4141 gcataggccg aattcacaaa cgtcagctgg ccggcattgt cgcgcaccca tgccggtgcc
     4201 ggcaatgaat caagcaacgc tctcaacgtt tcgacatcgg tcagaagctg gtcatgccgt
     4261 gcggcaaggt cgagcaactc ctgctcgatg ccacttacgt cacacaggcg cagcacggca
     4321 cgcccgccaa tcgcgcggcc ttccgcctgc accggtcgcg ccgcgcgtgt cgtaagggtc
     4381 atcacgaagc cgcggccgtt gaccctcaga gtatcgaccg cttgctccag gcgtcgcgcc
     4441 gcggcgggct cgagccaggt gccgaatgca agcacgcgtt cagccgtagc gccgggcgcc
     4501 acgatcgaag tttcgccggt gatgtccggc tgctctgaag ctgccgccca tgtcaccagg
     4561 atctgcggct cagacaacaa aagcgttttg agccggtcag cttcggcttg taacgcaatg
     4621 atctcgtctc tcgcggcgct ttcgatgcga tctttcgacc gacgggcacg aagcagaatg
     4681 acgctcgcta aaaggcccaa tccgatcacg gcgaggatga aagtgagcag gctgatgcct
     4741 tggccacgaa ggatcgccat ggtgcgatgg atggcatcga ttgcggccgc accaaagtgc
     4801 gcctcggcgc ccgccgctga gtcggaaagg atgaaatttg cagtcacgaa ggtggcgagc
     4861 aatccgcctc gccacggacg agaacgcagc ctctcgttcg ccgtccggat tgtctccggc
     4921 attcgggcct gccccaacgg agcggggcgg cgtccgccac gccgtttccc gcgaatcaat
     4981 tgagtttacc cctaagggga atcgcgccga aagagtccag atcgtgaaca ggtcccgcgg
     5041 ggcagggtcg gatgctattt cgctgcggcg gtggtacgtc ggaccattcc atcaatactg
     5101 atacgtctga ccatgtcatc aatactgata cgaccgaggg cgacggaaac cgttcgttcg
     5161 gtttcggcca gcgcgggcca gacgacttca tttaccagcg cggagttggg cgggagcgca
     5221 tcgacctcgt ccacagtggt tgctgcacgc agaatatcgt cggccgtgat gcggttgcgt
     5281 tcgcgtccca gctcgtagcc gccatgaggg ccccgaatcc ccctcaggat gccatcgcgc
     5341 accagcgctt gcagcaccgg ctcgaggtgg cgaggtggca gccggtgacg ggcggccagt
     5401 gccttagccg acaccgggcg cgtccgggca tttattgcaa cgtcgatgac cgcagcaatt
     5461 gccaggatgc cctttctgga caccagagcc atttgacgaa ccactcatgg tagcagcgta
     5521 catgaatggt attaagctac ggcactcgat ccgtgtacct acgaatggtg gagatcacag
     5581 gtcaacttcc ggttgaacca aagccgccgc ttccgcgcac cgtttcctcg agagacatga
     5641 cctccacgat ctgagcacga gcaaccggcg cgatcaccaa ttgggcaatg cgcatgcctc
     5701 ttgtaatcgt cacgtcttcg ttgccgagat ttgcaagcac gacctgaatc tcaccgcggt
     5761 aatcggcgtc gatcgtgcct ggagcattga ggatcgtgag accatggcgc gtggcaagtc
     5821 ctgagcgtgg ccgcacctgg ccttcgtaac cttcaggaac agcgatcgcg atgccagtcg
     5881 gtactagcgc acgcgcaccg gctcgaaggg tcaaaggttt ggggattgcg gcgaacagat
     5941 cgagcccggc cgcgccggca gtctgataat ccgggaggga caagccctcg ctgtgcgtca
     6001 accgcatcat gcgcacttcg gggccgctca ctgcttctcc cctttgagag catcgccaat
     6061 acgagcgacc aacatggctg cgacctcatc cttgctttgc ggcggccacg cttcagcacc
     6121 agatgcgcgc acaagcgtga tggtgttgcg gtctccgccc atcacgcccg actgcggcga
     6181 gacatcgttg gccaaaatcc aatcacagcc
//
LOCUS       DATDHO010000528         1578 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_24794, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000528 DATDHO010000000
VERSION     DATDHO010000528.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_24794"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..506
                     /locus_tag="VIY07_10090"
     CDS             <1..506
                     /locus_tag="VIY07_10090"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY6382138.1"
                     /translation="DYHRRINDPSLKIDENTLLFMRGAGPIGSPGSAEVVNMQPPAAL
                     IKNGITSLPCIGDGRQSGTSGSPSILNSSPEAAANGGIALLKTGDRVRINLRKGTADI
                     LVSKAELARRRKALLRRGGYHYPPSQTPWQEIQRAIVDQLADGMVLKPAVKYQRVAQK
                     SVPRDNH"
     gene            520..1278
                     /locus_tag="VIY07_10095"
     CDS             520..1278
                     /locus_tag="VIY07_10095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6382139.1"
                     /translation="MSNRLKGKLALVTAAGQGIGRAIAEAFIAEGAKVIATDVAADKL
                     KGLKAAKCAKLDVLSSKAVDAFAGAVAKEFGALDVLANVAGYVHQGTVIDCSEKDWDF
                     SFDLNVKSMHRTIKAFLPAMLKNAGGSIINMSSGVSSVKGLPNRYAYGATKAAVIGLT
                     KAVAADFITKGIRCNAICPGTIVSPSFEERVKAVSKKTGKPLKEVRETFVARQPMARL
                     GTAEEVAALAVFLASDESTYITGQPHLVDGGLAL"
     gene            1444..>1578
                     /locus_tag="VIY07_10100"
     CDS             1444..>1578
                     /locus_tag="VIY07_10100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003505588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6382140.1"
                     /translation="MASVAIRDVRKAFGATAVIHGVDISIRDGEFVVLVGPSGCGKST
                     L"
BASE COUNT          328 a          468 c          489 g          293 t
ORIGIN      
        1 aggattatca ccggcgcatc aacgacccgt cgctgaagat cgatgaaaat accttgctgt
       61 tcatgcgtgg cgccggaccg atcggctccc cgggatcggc agaagttgtg aacatgcagc
      121 cgccggcggc tctcatcaag aacggcatca cctcgctgcc ctgcatcggc gacgggcggc
      181 agtcggggac gtccggctcg ccgtcgatcc tgaattcatc gccggaggcc gcagccaatg
      241 gcgggattgc gctgctaaag acaggcgacc gcgtgcgcat aaacctccgc aagggaaccg
      301 ccgacatcct ggtttcgaaa gccgagctgg cgcgccggcg gaaagcattg ctcagacgcg
      361 gcggttatca ttatccgccg agccagacgc cgtggcagga aatccagcgc gcgatagtcg
      421 accagctggc cgacggcatg gtgcttaagc ccgcggtgaa atatcaacgc gtcgcccaga
      481 aaagcgtccc acgcgacaac cactgaagag agtgccgtcg tgagcaacag gttgaaggga
      541 aaattagcgt tggtcaccgc tgccggccaa ggcatcggcc gggccatcgc cgaggcattc
      601 atcgccgaag gcgccaaggt catcgcaacc gacgtcgccg ccgacaagct gaagggattg
      661 aaagctgcga aatgcgcgaa actcgatgtg ctgtcgagta aagcggtcga tgcattcgcc
      721 ggcgcagtgg cgaaggaatt cggcgcgctt gatgtgctcg ccaacgtggc gggttacgta
      781 catcagggca cggtgatcga ttgttcggaa aaggactggg atttttcctt cgacctcaac
      841 gtcaaatcca tgcaccggac gatcaaggct tttcttcctg ccatgctgaa gaatgccggc
      901 ggttcgatca ttaacatgtc gtccggcgtt tcttcggtca aaggactgcc caatcgctac
      961 gcctacggcg ccacgaaagc cgccgtgatc gggctgacca aggccgttgc tgccgacttc
     1021 atcaccaagg gcattcgctg caatgcaatc tgccccggca caatcgtctc tccatcgttc
     1081 gaggagcgcg tcaaggcggt gtccaaaaag acgggtaaac cgctcaagga agtgcgagaa
     1141 acctttgttg cgcgtcagcc gatggcgcgg cttggcactg ccgaggaagt agcggcgctc
     1201 gcggttttcc tggcctcgga tgaatccacc tacatcaccg gccaaccgca tctggtcgat
     1261 ggcggcttgg ccttgtaggg agccgattcc cggcgtcttt ttgcgtaccc ccggtcgcac
     1321 gtcgggcttg cttttcggct ggcgaaagtc cgatgatttg cccttgcgcg ggtgttccag
     1381 gcacccgcgg caatagaaga aaaacaacat gaaaggctgc cggggcagcc gcgggaggaa
     1441 tgaatggctt cggtcgcaat ccgcgacgta cgaaaagcct tcggcgcgac tgccgttatc
     1501 catggcgtcg acatctcgat ccgcgatggc gagttcgtag ttctggtcgg gccctccggg
     1561 tgcggcaagt cgacgttg
//
LOCUS       DATDHO010000529         2875 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_322221, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000529 DATDHO010000000
VERSION     DATDHO010000529.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322221"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /locus_tag="VIY07_10105"
     CDS             complement(<1..647)
                     /locus_tag="VIY07_10105"
                     /inference="COORDINATES: protein motif:HMM:NF012981.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEY6382141.1"
                     /translation="MRATLFHNPSAGHKADKDDILAAMKLADFDVRYVSVKQDDIEEA
                     LKKKTDLIVIAGGDGTITEVTTKLPDRSIPVAVLPLGTANNIARSLGVAGTPQELVET
                     WKLKKTRALDVGMVKASWGTSRFIEGFGVGLFAEFLKAADKREKGKGADNLRKGRALL
                     EKWVKTAKPIDIAITIDGKALNGEFLGVEVMNVPFTGPALPLAAKANIADGRLDIV"
     gene            complement(785..2446)
                     /locus_tag="VIY07_10110"
     CDS             complement(785..2446)
                     /locus_tag="VIY07_10110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEY6382142.1"
                     /translation="MSPPVKVLAYVIALAVAALVAFPLAGLVRLAALGDTELWPHLAA
                     HVLPVALTETLLLLLGVAAIIAVAGVGTAWLVTTFQFPGRDTLLWVLPLPLAIPTYIA
                     AYIYVDILDSAGPLQTALRGLFGWRVGTDYWFPPIRSLGGAIFVIGFVLYPYVYIAAR
                     AMFQTQCTAFIEAARMVGAKPWRLLCDIAVPLARPALAVGVALALLETLNDIGASEYL
                     GVQTLTLSVFTTWLNRGSLGGAAQIALTMLAMVAMLLALERYGRRRQSYRSETQDPAA
                     GTRIMLRGGTAWCATFACFTPVALGFFIPAGFLLREVILRGLLTALDPALLRHTATTI
                     VLAACATSSILVLGVAAAVSLRLVRRPMITICVAVAALGYAVPGTVLALGLLPPLVGI
                     DEAINWASAHLIGLTVGLVLTGSSAGLVVAYAVRFLSIAIGFAQAGLARVAIELEEVA
                     RLCGAGPLTVVRSVHLPLMRPAVWGAALLVFVDCLKELPITLLLRPLNVETLSTYIYQ
                     FATRGSFEEGALAALLIVGVGILPVIWIVRLTETAPAGMPPTTYG"
     gene            complement(2479..>2875)
                     /locus_tag="VIY07_10115"
     CDS             complement(2479..>2875)
                     /locus_tag="VIY07_10115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY6382143.1"
                     /translation="AAGKCDLGIGNTYYWALMTESPAQKPWADATRVVLPTFEGGGTH
                     VNVSGVVLAKYAPNKANAMKLIEWLVGDTAQHMYADSVFEYPLRNGVAVNPIIAGYGT
                     LKPDALPLSKIAEFKKAAATLVDKVGFDN"
BASE COUNT          623 a          880 c          817 g          555 t
ORIGIN      
        1 actatgtcca gccgtccgtc agcgatgttg gctttggcgg ctaacggcag cgccggcccg
       61 gtaaatggca cattcatcac ctcaacacca agaaactcgc cgttgagggc tttgccatcg
      121 atcgtaatcg cgatgtcgat cggctttgcg gttttaaccc atttctccaa cagcgcgcgt
      181 cctttgcgca aattgtcggc gcccttacct ttttcgcgct tgtccgctgc tttcagaaat
      241 tccgcaaaca atccgacgcc aaatccctcg ataaaacgcg aagtgcccca ggatgctttg
      301 accatcccaa catccagtgc tcgggtcttt ttgagtttcc atgtttccac taattcctgt
      361 ggtgtgccgg caactccgag tgaccgcgcg atattgttcg cagtgccgag cggcaataca
      421 gccacgggga ttgatcgatc gggcagcttg gtcgttactt cggttatggt gccgtcgccg
      481 ccggcaatga ctatcaagtc ggtctttttt ttcagtgcct cctcaatatc atcttgttta
      541 accgatacgt accgcacgtc gaagtcggct agcttcatcg cagctaaaat atcgtcctta
      601 tcggccttat gtccggccga ggggttgtgg aagagtgttg cccgcatgga acagataaca
      661 tcggcgagct agtcgggttc cgccttctgt gaattgagac ggctattcat ttgatgtctg
      721 gcgctttatg tgtcccgtgc ccgatatctg cgtttgcttg tgattttcgc ggaccctctg
      781 ccggctagcc gtaagtcgtt ggcggcattc cggcaggtgc tgtttccgtc agccgaacga
      841 tccagataac cggcaggatg ccgacgccga cgatcagcag ggctgcaagc gcaccttcct
      901 cgaagctgcc tcgcgtcgcg aattggtaga tataggtcga cagtgtttcg acgttgagtg
      961 gacgcagcaa cagcgttatc ggcaattcct tcaggcaatc gacgaacaca agcagcgccg
     1021 caccccacac tgccggccgc attaacggca ggtgcacgct gcgcaccact gtcagtgggc
     1081 cggcgccgca aagccgcgcg acttcttcga gttcgattgc cacacgtgcc agtccggctt
     1141 gcgcaaagcc gattgctatc gagaggaacc gtacggcgta agcgacgacc aatcccgcgc
     1201 tggatccggt gagcaccagg ccgaccgtca aaccgatcag atgcgcgctc gcccagttga
     1261 tcgcctcgtc aatgccgacc aatggcggca agagacccaa cgccagtacc gttcctggga
     1321 ctgcatagcc aagggccgcg actgccacac agatcgttat catcggtcga cggaccaaac
     1381 gcaacgacac ggccgcagcg acgccgagca caagaatgct gctggtagcg caggcggcca
     1441 atacgatggt ggtcgcagta tggcgcagca gtgccggatc gagtgcggtt agcagtccgc
     1501 gcaggattac ctcgcgtaat aaaaatcctg ccggaatgaa gaagcccagg gctaccggtg
     1561 taaagcaggc gaatgtagcg caccacgccg tccccccgcg cagcatgatg cgcgtgccgg
     1621 cggctgggtc ctgcgtctcc gaacggtagc tctgccgcct tcggccgtaa cgctcgagcg
     1681 ccagcagcat cgcgaccatc gcaagcattg tgagcgcaat ctgggcggcg ccgccgaggc
     1741 tgccgcgatt aagccaggtt gtgaagactg acaacgtgag cgtctgcacg ccaaggtatt
     1801 cactggcacc aatgtcgttc agcgtctcca gaagcgcgag cgcaacaccg actgccagcg
     1861 ccgggcgtgc aagcggcacc gcgatgtcgc acaacaagcg ccagggtttg gctccgacca
     1921 tacgcgccgc ttcaatgaaa gcagtgcatt gcgtttggaa catcgcccgg gcggcgatat
     1981 agacatacgg atacaggacg aagccgatca caaagatcgc cccgccgagc gagcggatcg
     2041 gcggaaacca gtagtcggtc ccgacacgcc acccgaacag acctcgcaac gctgtttgca
     2101 gcggcccggc actgtccaaa atgtccacat atatgtatgc cgcgatatag gtgggaattg
     2161 cgagcggcag cggcagcacc cacagcaacg tatcgcgacc gggaaactgg aaggtggtca
     2221 ccagccacgc cgtgccgacc ccggcgacgg cgattattgc agcgacgccg agcagaagga
     2281 gcaacgtctc cgtcagtgcg actggaagga catgagctgc gagatgcggc cacagctcgg
     2341 tgtcgccgag cgccgcgagg cgcaccaagc ccgcgagcgg aaacgccacc agcgcggcca
     2401 ccgcgagcgc gattacgtaa gccagtactt tgaccggcgg cgacaattca acaacaggac
     2461 gacactaaac gggacggtct aattgtcgaa accaacttta tcgaccaacg tggcagccgc
     2521 ctttttgaat tcggcgatct ttgaaagcgg caaagcgtcg ggtttcagcg taccgtaacc
     2581 cgcaataatc ggattcacgg caacgccgtt tcgcaacgga tattcgaaga cgctatccgc
     2641 gtacatatgc tgggcagtat cgccgaccag ccattcgatc agcttcatgg cgttggcctt
     2701 gttcggcgca tatttggcga gcaccacacc ggaaacattc acatgcgtac caccaccctc
     2761 gaaggtcggc agcaccactc gggtggcatc ggcccagggt ttttgcgccg ggctctcggt
     2821 catcagcgcc cagtaataag tattgccaat accaagatcg catttgccgg ccgca
//
LOCUS       DATDHO010000530         3334 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_467375, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000530 DATDHO010000000
VERSION     DATDHO010000530.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3334
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467375"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..454
                     /locus_tag="VIY07_10120"
     CDS             <1..454
                     /locus_tag="VIY07_10120"
                     /inference="COORDINATES: protein motif:HMM:NF023367.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3459 domain-containing protein"
                     /protein_id="HEY6382144.1"
                     /translation="EPFPFFCDFKGELAEAVRSGRKREFAEAYARHANIPDPISPDTR
                     ASAVLDWKAITRPEHARRLELTRALLDVRRRAIVPLLTAIRDSEVSFDDGVLSARWQA
                     GSKALKLLANLTDVALRRAEMNWGEPIWGGEPPRELPPWSVYAAIGDA"
     gene            606..>3334
                     /gene="treY"
                     /locus_tag="VIY07_10125"
     CDS             606..>3334
                     /gene="treY"
                     /locus_tag="VIY07_10125"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR02401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047470 - (1,4)-alpha-D-glucan
                     1-alpha-D-glucosylmutase activity [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HEY6382145.1"
                     /translation="MASDIPLATYRLQLTKDFGFDDAAAIVRYLKELGITHLYASPFL
                     KARPGSTHGYDIVDHDRLNPELGGEEGFARLSAVLKEHGLGLILDFVPNHMVVGSADN
                     AWWLDVLEWGPGSPHARSFDIDWNALPHRRHPGVLLPILASAYGEALQSGEIQLKYDP
                     ASGTFAAWYFQHKLPINPQRYGEILRTAVAAAHGADDGISRELIALADDYRDPRSPSY
                     REAPNLKRRLRDIEGAAAVLERGLEAYSGTTETGAGLLHRLLERQHYRVAYWRVAFSA
                     VNYRRFFDINELAGLRVEDPATFRTVHALVSRLISADQLQGLRLDHIDGLRDPAQYTK
                     RLGHMIRKLRREAGLPTGFYVIVEKILADGETMPHFPGVAGTTGYEWLNMFSHVLVDG
                     RGLERLDATYRDCAGEQRDFAGMLDAAKQLVIETILASEFGVLCGALSRIAAGHFSTR
                     DFTIDRLRAALLLYVLEFPVYRTYVTAAGASGQDRRLIEEIVSRARARWRGPDPQIFD
                     FLLSAVTLDLAGNPSYSAPRVREFALKLQQFTGPLMAKAMEDTAFYRYQRLLAFNEVG
                     GDPTTGELSLAAFHERQRLRSEGAAQGLTVTATHDTKRGEDARARILAIAELAEDWDA
                     SVKDWLSRNAALIQYRNGRRLPSRPHEYMLYQALVGAWPGKTDAQLVTRMQDYAVKAA
                     REGKEETNWTDPNETYEAALRAFVAGLLDPMISAGFLTSFETFAARTTLLGALNSVSQ
                     LALKSLLPGVPDFYQGTELWDLSLVDPDNRRPVDFSARRSFLAEGPLPWDTLASRWQD
                     GRIKLAVTHALLALRQGLPDLFRYGTYEPIEAAGPHAGHVVGFARAWKKERLVVAVGR
                     HFSPMTDGGRCWPSGWQATLPLPPGTYRDIFDPASTSHRNEVSVAILFATYPI"
BASE COUNT          605 a         1038 c         1057 g          634 t
ORIGIN      
        1 cgaaccattc ccttttttct gcgatttcaa gggagaattg gccgaggccg tgcgcagcgg
       61 acgcaagcgc gagtttgccg aagcctatgc gcgccatgcc aacattcccg atccgatttc
      121 accggacacg cgggccagcg ccgttcttga ttggaaggcg atcacacgac cggagcatgc
      181 ccgccggctt gagctgacgc gtgcgctgct tgacgtgcgc aggcgcgcga tcgtgccgct
      241 gctcacggca attcgggaca gcgaggtcag cttcgatgac ggagttctga gcgcccgctg
      301 gcaggcggga tcgaaggcgc tcaaactgct ggccaacctg acggacgttg cgctgcggcg
      361 cgcggagatg aactggggcg agccgatctg gggcggcgag cctccgcgcg aattgccgcc
      421 gtggtcggtc tacgcagcca tcggggacgc ctgatggtca acacgctgaa ttccgtccgt
      481 tcattcccgc gtaagcggga atccagaaca atgggtcccc gcttgagcct gtgctcgggc
      541 cagctgaagg ctggacccga gtacggggac gaacggaaaa aacacgcagc catcggggac
      601 gcctgatggc ctccgatatt ccgcttgcga cctaccgcct gcagctcacc aaggattttg
      661 gcttcgacga cgcagccgcg attgtgcgtt acctcaagga gctgggcatc acgcatttat
      721 atgcgtcgcc gtttctcaag gcgcggcccg gaagcaccca cggatatgac attgtcgatc
      781 acgatcggct caatccggag cttgggggcg aggaagggtt cgcacgcctg agcgcggtac
      841 tgaaggagca cgggctcggc ctcattctcg atttcgtccc caaccacatg gtcgtcggca
      901 gcgccgataa cgcgtggtgg cttgatgttc tcgaatgggg acccggttct ccgcacgcgc
      961 ggtccttcga catcgactgg aacgcgctgc cgcatcggcg ccatcccgga gtgctgctgc
     1021 cgatcctcgc aagcgcctat ggcgaggcgt tgcagagcgg cgagatccag ctcaaatacg
     1081 atcccgcgag cgggaccttc gcggcctggt atttccagca caagctaccg atcaatccgc
     1141 aacgatatgg cgagatcctg cgcaccgctg tcgccgccgc tcatggcgcg gatgatggga
     1201 tttcgcgcga gctgatcgcg ctcgcagatg attaccgcga tccccgctcg ccctcctatc
     1261 gcgaagcccc gaacctcaaa cggcggttgc gggatatcga aggcgccgca gcggtgctcg
     1321 agcgcggact cgaggcctac agcggcacga ctgaaaccgg cgcggggctg ctccatcgcc
     1381 tgctcgaacg tcagcattac cgcgtcgcat attggcgggt cgctttctcg gcggtgaact
     1441 accggcgctt cttcgacatc aacgagctcg ccggcctgag ggtcgaggat ccggcgacgt
     1501 ttcgcaccgt ccatgcactg gtgtcgagat tgatctccgc cgatcagctg cagggtttgc
     1561 ggctcgacca catcgatggg ttgcgcgatc cggcccaata caccaagcgg cttggtcaca
     1621 tgatccgcaa gctgcggcgc gaggcgggat tgccgacggg cttttatgtc atcgtcgaga
     1681 agattctggc cgacggcgaa acgatgccgc actttcccgg cgttgccgga acgactggat
     1741 acgaatggct caatatgttt tcgcatgtac tcgtcgatgg acgcgggctc gagcgccttg
     1801 acgcgacgta tagggactgc gccggcgagc agagagattt tgccggcatg ctggatgcgg
     1861 caaagcagct cgtgatcgaa accatccttg cgagcgaatt cggcgtgctc tgcggcgcgc
     1921 tttcacgcat cgcggccggc catttcagca cgcgcgactt caccatcgac cggctgcgcg
     1981 cggccctgct gctctatgtg ctggaatttc cggtttatcg cacgtatgtc accgccgccg
     2041 gcgcatccgg gcaggaccga cgcctgatcg aagagatcgt ctcgcgcgct cgcgcccgat
     2101 ggcgtgggcc cgatccgcag atattcgatt ttttgctgag cgcagtcact ctcgatctcg
     2161 cgggcaatcc gagttacagc gcaccccgcg tgcgcgagtt cgcgctcaag ctccagcaat
     2221 ttaccggacc gctgatggcg aaggccatgg aggacacggc cttttatcgc tatcagcgcc
     2281 tgctcgcctt caatgaagtt ggcggcgatc caacgacagg cgagctcagt ctcgccgcgt
     2341 ttcacgagcg acagcgattg cgctcggaag gtgccgcgca ggggctcacg gtcaccgcaa
     2401 cccatgacac caagcgcggt gaggacgcgc gggcgcgcat tcttgctatc gccgaacttg
     2461 cagaagactg ggacgcatcg gtgaaagact ggctcagccg gaatgctgca ctgatccagt
     2521 accggaacgg caggcgcctc ccgagcaggc cgcacgaata catgttgtac caggccctgg
     2581 tcggcgcctg gccggggaag acggatgccc agctggtcac gcggatgcag gattatgcgg
     2641 tcaaggcggc gcgcgaaggc aaagaggaaa ccaactggac cgatccgaac gaaacttacg
     2701 aggcggcgct gcgggcgttc gtggcgggcc tgctcgaccc tatgatctcg gcagggtttt
     2761 tgacctcgtt cgaaacattc gcggcgcgca ccacgctgct gggcgccctc aattctgtct
     2821 cgcaactggc gctcaagagc ctgttgccag gagtgccgga cttctatcag ggcaccgaac
     2881 tctgggacct ttcgctggtc gatccggaca acaggcgtcc ggtggatttt tccgcgcgtc
     2941 gaagcttctt ggccgagggc ccactgcctt gggacacatt ggcctcacga tggcaggacg
     3001 gccggatcaa gcttgccgtg acgcatgcgt tgctggcttt gcggcaaggc ctgcccgatc
     3061 ttttccggta cggaacttat gagccgatcg aggccgcagg gccgcacgcg ggccatgttg
     3121 ttggatttgc ccgtgcatgg aaaaaggagc ggcttgtggt ggccgttggc cggcattttt
     3181 cacctatgac cgacggcgga cgctgttggc cgtcgggctg gcaggcgaca ttgcccctgc
     3241 cccctggcac gtacagagac atttttgacc cggcctcaac cagtcatcga aatgaagtct
     3301 ctgtcgcgat tttgttcgcg acctacccca tcag
//
LOCUS       DATDHO010000531        11007 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_421524, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000531 DATDHO010000000
VERSION     DATDHO010000531.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 11007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11007
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_421524"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..427
                     /locus_tag="VIY07_10130"
     CDS             <1..427
                     /locus_tag="VIY07_10130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEY6382146.1"
                     /translation="NSTTPARGAPPLRQATPTPNVPLSLTPDARTQERAQPSQTAAVP
                     PQAAAPAPTTSSSPGSGAFVQVSSQRSEGEAQAAYRSLQAKYPNQLNGRELSIQKADL
                     GSKGTYYRAMIGPFASANEASEWCSSLKAAGGQCLIPRN"
     gene            475..1431
                     /gene="nagZ"
                     /locus_tag="VIY07_10135"
     CDS             475..1431
                     /gene="nagZ"
                     /locus_tag="VIY07_10135"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEY6382147.1"
                     /translation="MAARAFITGLAGLSITASERSFLRDTQPWGLIIFKRNVSTPDQV
                     AQLTQSFRDCVGGQAPVFVDQEGGRVQRLGPPHWPVYPPGARYGEIYDRDPASGIAAA
                     RLAGHLIAADLRPVGIDADCLPLGDVPLAGSDQVIGDRAYGNEAGKVAAIANAIAAGL
                     QAGGVLPVLKHLPGHGRANADSHHKLPVVDTDRKTLEETDFAAFRALASLPLGMTAHV
                     VFSAFDPVAPATTSVTMVREVIRGFIGFRGLLMTDDISMNALSGTIAERSRAALTAGC
                     DVVLHCNGDMREMEAVAAEAPELSGDSAVRADAALAARSAPE"
     gene            1512..2333
                     /locus_tag="VIY07_10140"
     CDS             1512..2333
                     /locus_tag="VIY07_10140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HEY6382148.1"
                     /translation="MSTEEFDTTLGADRGTTEPAMIVDVEGFEGPLDLLLMLARQQKV
                     DLAKISILALADQYLSFIEAARQLRLELAADYLVMAAWLAYLKSRLLLPEVESGEGPS
                     AEEMALALAHRLRRLEAIRDVATRMMDRPQLNRDIFPRGLPEPIDEIKQPEWSATLYD
                     LLSAYATQRSRRALSRVRFKQRTVWSLAEARSALERLMGQSTDWSRVDEFLIRYVVEP
                     ALAATVFASSFASALELVREGLAEIHQRESFAPLYMRKRVGAIGNATTHDAQEKA"
     gene            2347..3066
                     /gene="scpB"
                     /locus_tag="VIY07_10145"
     CDS             2347..3066
                     /gene="scpB"
                     /locus_tag="VIY07_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEY6382149.1"
                     /translation="MPGAAKKLVVVQNNEPAAEAAPAPTTRPEELRLLEALLFAADEP
                     LDEAMLARRLPSGVNVKNALAQLRDEYASRGVNLVKVGRKWTFRTAVDLSWLLTKQVV
                     ETRKLSRAATETLAIVAYHQPVTRAEIEEIRGVVTAAGTLDVLLKTGWIRPRGRRKAP
                     GRPITYGTTEAFLSHFGLEEVGDLPGLEELKGAGLLEGNLPAGFAVPVPSDVSTLRDD
                     EDPLEPGDLDLGLAPPARSEK"
     gene            3210..3455
                     /locus_tag="VIY07_10150"
     CDS             3210..3455
                     /locus_tag="VIY07_10150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HEY6382150.1"
                     /translation="MGSLSIWHWIIVLVVVLVLFGGRGKISSLMGDFASGIKAFKKGM
                     SEDDKSADAKSEPVKTIEASGGATKTEAERRAEGVRS"
     gene            3542..4009
                     /gene="tatB"
                     /locus_tag="VIY07_10155"
     CDS             3542..4009
                     /gene="tatB"
                     /locus_tag="VIY07_10155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HEY6382151.1"
                     /translation="MFDIGWGELVVIGIVALIAIGPKELPTVLRTLGQYMAKIRRMAG
                     DFQSQFQEAMREAELSELKKQAEDLKSSVSDVTRFDPMADTQKEIERAFEMPEPKPVE
                     TASETPPGAPAALPEPQQQVDVSVPLPDPPPPVSEKDFAPAEGPPPQQAGAKS"
     gene            4006..4824
                     /gene="tatC"
                     /locus_tag="VIY07_10160"
     CDS             4006..4824
                     /gene="tatC"
                     /locus_tag="VIY07_10160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEY6382152.1"
                     /translation="MTHEDIEATKAPLMDHLIELRSRLIKALIAFAAMFALCFVFAKD
                     IYNILVWPFVWIAGPENSKFIYTALLEYFVTQLKLAMFGAAFLSFPIVATQIYMFVAP
                     GLYHHERKAFLPYLIATPIFFALGSMVVYFLVMPMLVRFSLGMQQTGGATDASIALMP
                     KVGEYLSLMMALVLAFGVAFQLPVILTLLGRIGVITAEQLKAKRRYFIVGAFVLAAVL
                     TPPDVISQLSLAIPLLILYEGSIWSVRIVEKKAKAEEAAKAAAEAASASAKPAE"
     gene            4987..6264
                     /gene="serS"
                     /locus_tag="VIY07_10165"
     CDS             4987..6264
                     /gene="serS"
                     /locus_tag="VIY07_10165"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEY6382153.1"
                     /translation="MYDIKWIREHPDQFDRGLKRRGLQPLSQKLIARDEKRRAAITKF
                     EQAQARRNAASKEIGDAKKVKDEARAGKLMAEVAELKTALPELEERQRTLAAELEKEL
                     AQIPNGPLDDVPDGADASGNVEHHVFGKKRDYAFKPKQHFELGEALGQMDFELAAKLS
                     GARFVVLQKGLARLERALGQFMLDLHTGREHGYTEVNPPILVRDEVMFGTAQLPKFAD
                     DQFRTTNDFWLIPTAEVPLTNLARESIVEEAQLPMRLTACTPCFRAEAGAAGKDTRGM
                     IRQHQFTKVELVSITTPEKSKEEHERMLACAEEVLKKLELHYRVVTLCTGDMGFAAQK
                     TYDIEVWLPGQNAYREISSCSNCGEFQARRMNARYRSKDGVRHVHTLNGSGVAVGRAL
                     IAVMETFQQENGSIAVPSALAPYMGGLTKIERT"
     gene            6264..7025
                     /gene="surE"
                     /locus_tag="VIY07_10170"
     CDS             6264..7025
                     /gene="surE"
                     /locus_tag="VIY07_10170"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEY6382154.1"
                     /translation="MRILVTNDDGIHSPGLAACEKIARALSDEVWIVAPEIDQSGVSH
                     SLSLNDPLRMREVGERHFAIKGTPTDCVIMGVRYLMKEKPDLLLSGVNRGRNCAEDVT
                     YSGTVAGAMEGAVLGIPSFALSQAYSFSTKRLPCWDTAIKFAPDLIKRVLETGMPRDV
                     LVNVNFPDCPPDEVAGVSVAMQGKRDQELLRIDARHDGRGNPYYWIAFGRGGVVGAAP
                     GSDLAALSENRIAVTPLRLDLTDEPFMTKLAEVFG"
     gene            complement(7022..7387)
                     /locus_tag="VIY07_10175"
     CDS             complement(7022..7387)
                     /locus_tag="VIY07_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6382155.1"
                     /translation="MTGSSAPAPRVLVVEDEYLIRMLLEDMLGELGYGVAAAVGTISE
                     ASQIAKSGEFNAAILDVNLDGQEIYPVADILTERGLPFVFVTGYGERSLPEAYRGRPA
                     LQKPFQAEQLKTTLAGLLA"
     gene            7496..8146
                     /locus_tag="VIY07_10180"
     CDS             7496..8146
                     /locus_tag="VIY07_10180"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HEY6382156.1"
                     /translation="MPTNEQDDDRMEFLLTLRRRGIADQAVLRAMDEVPRERFVDAGF
                     LRSAYADQALPIACGQTISQPYVVAYMTEQLAVQPNHRVLEVGTGSGYQAAVLSRLAR
                     EVVTIERYRTLADQAQERLRSLGYDNVDVVVGDGFTGVPGRAPYDRIIVTAAAEIVPE
                     TLLDQLVENGVMILPLGSQDGSQHLIKLTKSQTGTWRENLIPVRFVPMLPGQAQEL"
     gene            8627..9514
                     /locus_tag="VIY07_10185"
     CDS             8627..9514
                     /locus_tag="VIY07_10185"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEY6382157.1"
                     /translation="MTVGYGETVDSIARRHGVPASAILQTNGIRDASQIRPGQRLVIP
                     RHVTSGTQTASRFSSPVAGKVHIVRSGETLMSISRRTGVSVTALARANRLHTTSRLSV
                     GDRLTIPSGGYAVASAHATSAPQAAQARPAPLQKVASLGPVHTANVAKEDQPQKPETA
                     VRTAEPAGAMPSFRWPVRGRVIAGFGSKPNGTQNDGINLAVPEGTPIKAADDGVVAYA
                     GNELKGYGNLVLIRHANGFVSAYAHASEIMVKRGDTIKRGQVIAHAGQTGNVTSPQLH
                     FEIRKGSTPVDPTQYLGGA"
     gene            complement(9558..10451)
                     /locus_tag="VIY07_10190"
     CDS             complement(9558..10451)
                     /locus_tag="VIY07_10190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6382158.1"
                     /translation="MRKPKAGDRPEEQADALDRIAAALDRLAPQRSILPDLSAVDAFV
                     WHPDGRLSPVSHVNRVEMSLLKGIDRVRDVLVENTERFAKGLPANNALLWGARGMGKS
                     SLVKAAHAGVNAALARKISNGPLKLIEIHREDIDSLPALMALTRGSSHRFIVFCDDLS
                     FDAEDTTYKSLKAVLEGGIEGRPDNVIFYATSNRRHMMSRDMMENERSTAINPGETVE
                     EKVSLSDRFGLWLGFHRCSQDEYLAMVDGYVAHYKIPARGESLHREALEWSTTRGSRS
                     GRVAWQFVQDLAGRLGVALKT"
     gene            10682..>11007
                     /gene="yajC"
                     /locus_tag="VIY07_10195"
     CDS             10682..>11007
                     /gene="yajC"
                     /locus_tag="VIY07_10195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEY6382159.1"
                     /translation="MFITPAFAQGLGAGDSGMLMSLLPFALIFVIMYFLILRPQQKRV
                     KQHQEMVKNVRRGDTVVTNGGLIGKVTKVIDDDQIEIEIADDVRIRQMRQMVADVRAK
                     GEPVKE"
BASE COUNT         2144 a         3332 c         3432 g         2099 t
ORIGIN      
        1 gaattcgacc actccggcac gcggcgcgcc gcctctacgc caggccaccc cgacgcccaa
       61 tgtcccgcta tcgctaacgc cggacgcgcg gacccaggaa cgggctcagc ccagccagac
      121 ggccgcagtt ccgccgcagg cggccgctcc tgctcctacg accagcagtt ccccgggcag
      181 tggggccttt gtccaggtat cgtcgcagcg cagcgagggt gaggcccagg cggcatatcg
      241 cagtcttcag gccaagtatc cgaaccaact caacgggcgc gaactgtcga tccaaaaggc
      301 cgatctgggg tccaaaggaa cttactaccg cgccatgatt gggcccttcg ccagcgccaa
      361 cgaggcgagc gagtggtgct cgagcctcaa agcggcgggc ggccagtgcc tgatcccgag
      421 gaattaacga gccaaaactt gaccctggcg ccggacgcgg gctaatccgc cgcaatggcg
      481 gcgcgcgcgt tcatcacggg cctggcaggc ttgagcatta ctgccagtga gcgctcattc
      541 cttcgcgata cccagccatg gggcctgatc attttcaagc gaaacgtgag tacacccgat
      601 caagtagcgc aactcactca atcatttcgc gattgcgtcg gcgggcaggc gccggttttc
      661 gttgatcagg agggtggacg cgtccaacgg cttggaccgc cacactggcc tgtgtatccg
      721 ccaggagcgc gttacgggga gatttacgac cgcgatccgg catccggcat tgccgcggcg
      781 cggcttgcgg gacatttgat cgctgccgat cttagaccgg tgggaatcga tgcggattgc
      841 ctgccgttgg gagacgtccc gttggcgggc agcgatcagg tcataggcga ccgggcctat
      901 ggcaacgaag ccggcaaggt cgccgctatc gcaaatgcaa tcgcggcggg acttcaggcc
      961 gggggtgtcc ttccagttct caagcacctc ccaggccatg gtcgggcaaa tgcggatagc
     1021 catcacaagc ttccagtggt cgatacggac cgaaagaccc ttgaggagac cgactttgca
     1081 gctttccgcg cactcgcaag cttgccgctc ggcatgaccg cacatgttgt gtttagtgcc
     1141 ttcgacccgg tcgcgccggc caccacttcg gtcacaatgg tgcgggaagt gattcgcggc
     1201 tttatcggat ttcgaggcct gctgatgacc gacgacattt cgatgaatgc cctatcaggc
     1261 accatcgccg agcgtagccg cgccgcgctg acggcggggt gcgatgtcgt ccttcattgc
     1321 aatggcgaca tgcgcgagat ggaggccgtc gcggcggaag cgccggaact ttctggcgat
     1381 tctgcagttc gggccgatgc cgcgcttgcc gctcgctcgg cacccgagta attcgacacg
     1441 cacgccgcac gcacgatatt cgcgcaaatc gcgggcgacg agggaacgtc gtcgcaacgg
     1501 aagagcgtct catgagcacc gaggaattcg acaccaccct cggcgccgac cgcggcacaa
     1561 ccgagccggc gatgatcgtc gacgttgagg gtttcgaggg gcccctcgac ctgttgctga
     1621 tgcttgcacg tcagcaaaaa gtggatctcg ccaagatctc gattttggcg cttgccgacc
     1681 agtatttgtc tttcatcgag gcggcgcggc aattacgcct agaactcgct gccgattatc
     1741 tcgtgatggc cgcttggctc gcctatctca agtcgcgcct gctgctgccc gaagtggagt
     1801 caggcgaggg gccgagcgcg gaggagatgg cgttggcctt ggcgcatcgc ctgcgccggc
     1861 ttgaagcaat tcgcgacgtt gcaacacgga tgatggaccg ccctcaactc aatcgggaca
     1921 tttttccgcg cggacttcct gaaccgattg acgagatcaa gcagccggaa tggtcggcaa
     1981 cgctttacga tttgctgtcc gcctatgcca cgcagcggtc gcgcagagcc ctgtcgcgcg
     2041 tgcgattcaa gcagcgcacg gtatggtcgt tggccgaagc gcggtccgcg ctggagcgtt
     2101 tgatggggca gtcgacggac tggtcccgcg ttgatgaatt cttgatcagg tatgtcgttg
     2161 aaccggcgct tgccgcaacg gtctttgcct cttcattcgc gtccgcgctc gagctcgtgc
     2221 gcgaggggct tgccgaaatt caccaaagag agtcattcgc gccgctctac atgcgcaagc
     2281 gcgtcggcgc gattggaaat gcaacgacgc atgacgcgca agaaaaagca taaggggaag
     2341 ttgtccatgc cgggagcggc caagaagctc gtggtggtgc aaaacaatga gccggccgcc
     2401 gaggccgcgc cggctccgac gacgcgaccg gaggagctgc ggctcctcga ggctctgcta
     2461 ttcgccgcag acgagccgct cgacgaagcc atgctggcgc gaagacttcc cagcggagtc
     2521 aacgtcaaga atgctctggc gcaacttcgc gatgaatacg cgagccgcgg cgtcaatctt
     2581 gtcaaggtgg gcaggaagtg gacgttccgc accgccgtcg acctctcgtg gctgctcaca
     2641 aagcaggtcg tcgagacgcg caagctttcg cgtgccgcca ccgagacgct ggcaatcgtt
     2701 gcctatcatc agccggtgac tcgcgcggaa atcgaagaaa tccgcggcgt tgtcactgcg
     2761 gctggcacac tcgacgtgtt gctcaagacc gggtggatcc ggccgcgcgg ccgccgcaag
     2821 gcgccgggac gcccgatcac ctacggaacg acagaagcgt tcctgtcgca tttcggcctg
     2881 gaggaggtcg gtgacctgcc gggacttgag gaactcaagg gcgccggcct cctggagggc
     2941 aacctgccgg ccggcttcgc ggtaccggtc ccctccgacg tttcaacttt gcgcgacgat
     3001 gaggacccgc tcgaacctgg cgatcttgat ctgggcctcg ccccgccggc gcgttcagag
     3061 aaataaccgc cgggaattaa ggtaaattcc tctgatcacg cggccctttg accgggtgcg
     3121 aggtccttgt ttttgccgcc tgcggagcct aggttctcat cgaaatcatg gcgggacgag
     3181 ccgaaagccg tcgctgcgga ggatagagga tgggttccct tagtatatgg cactggatca
     3241 tcgtactggt ggtcgtgctg gtgctgtttg gcgggcgcgg aaagatttcg tccctgatgg
     3301 gcgactttgc gtcgggcatc aaagccttca agaagggcat gtcggaagac gacaagtcgg
     3361 ctgacgccaa gagcgagcca gttaagacga ttgaagcaag cggcggcgcc accaagacgg
     3421 aagccgaacg ccgcgccgaa ggcgtacgct cctgatcgct gctgtcggcg cgtagggggt
     3481 ggcggccgaa atgatcgtcg cggcggcggc ggtgcctcgg cgccttggag tttactaatc
     3541 catgttcgac attggttggg gcgagctcgt cgtcatcggc atcgtcgcgc tgatcgcgat
     3601 cgggccgaaa gagttgccca ctgtgttgcg cacactcggc cagtacatgg caaagatccg
     3661 gcgaatggcc ggcgacttcc agagccagtt tcaggaagcg atgcgcgaag ccgagctgtc
     3721 ggagctgaaa aagcaggccg aggatctcaa gagctcggtc agcgacgtga cccgtttcga
     3781 tccgatggca gacacgcaga aggaaatcga gcgcgctttc gagatgccgg aaccgaaacc
     3841 ggtcgagaca gcgagcgaga cgccacctgg tgcgccggcg gcgctgccgg agccgcagca
     3901 acaggtcgat gtgagcgtgc cactacccga tccgccgcca ccggtcagtg aaaaagattt
     3961 tgcccccgca gaagggccgc cccctcagca ggccggggcc aaatcatgac gcacgaagat
     4021 atcgaggcca ccaaggcgcc gctgatggat cacctgatcg agctgcgctc gcggctgatc
     4081 aaggcgctga tcgcgttcgc ggcgatgttc gccctctgct tcgttttcgc aaaggacatc
     4141 tacaatatcc ttgtatggcc attcgtctgg atagcaggcc cggaaaactc gaaattcatt
     4201 tacaccgcgc tgctcgaata cttcgtgacc cagctgaaac tcgcgatgtt cggcgcggcg
     4261 tttctttcgt ttcctatcgt tgccacgcaa atctacatgt ttgtggcgcc cgggctctat
     4321 catcacgagc gcaaggcatt cttgccctat ctgatcgcga cgccgatctt cttcgcgctt
     4381 ggatccatgg tcgtctattt tttggtcatg ccaatgctgg tgcgcttttc gctcggcatg
     4441 cagcagactg gcggcgccac cgacgcttcg atcgccctga tgccgaaggt cggcgaatat
     4501 ctgtcgctga tgatggcact tgtgctggct ttcggcgtgg ccttccagtt gccggtcatc
     4561 ctgacgctgc ttggccgtat cggcgttatc accgccgagc agctcaaggc caagcggcgt
     4621 tacttcatcg tcggcgcttt cgtgctggcg gcggttctca caccgcccga cgtcatcagc
     4681 cagctgtcgc tcgcgatccc cttgctcatt ctctacgagg gctcaatctg gtcggtgcgc
     4741 attgtcgaga aaaaggccaa ggccgaagag gctgcaaagg ctgccgccga agcggcgtcg
     4801 gcgagcgcga agccggcgga gtagggcacg ctttggtatt gactccgtca tgcccggctt
     4861 tatgccgggc gtccgcgtct ttggcttttc ccgagagaag acgtgggtgg ccgggagctt
     4921 tttgcgaaca agacggcgct tcgtgccttt tgcccggcca taagccgcga taaaagcgtc
     4981 cctgccatgt atgacatcaa atggattcgc gagcaccctg accagttcga ccgcggcctg
     5041 aagcggcgag ggctccagcc gctgtcacaa aagctcatag cgcgggatga gaaacgtcgg
     5101 gcggcgatca caaaattcga gcaggcgcag gcgcgacgca atgcggcgtc gaaggaaatt
     5161 ggcgacgcca agaaggtcaa agacgaagcc agagccggca agctgatggc cgaggtagcc
     5221 gagctaaaga ccgcattgcc ggaactggag gaaaggcaaa ggacgctcgc cgccgaactc
     5281 gaaaaagagc ttgcgcaaat tccgaacggg cccctcgacg acgtgccgga cggcgccgat
     5341 gcgagcggga atgtcgagca tcacgtgttc gggaagaagc gcgactatgc attcaagcca
     5401 aagcagcatt tcgagcttgg cgaagcgctg ggccagatgg atttcgagct ggcggccaaa
     5461 ttgtcgggtg cgcgctttgt cgttttgcag aaaggattgg cgcggctcga acgggcgctc
     5521 ggacaattca tgctggatct gcatacgggc cgcgagcacg gatataccga ggtgaatccg
     5581 cccattctgg tccgcgacga ggtgatgttt ggcacagcgc aactcccgaa gtttgcggac
     5641 gatcaattcc ggacgacaaa tgacttttgg ctcattccca ccgccgaagt gccactcact
     5701 aatcttgcgc gcgagtccat cgtcgaggaa gcgcagctgc cgatgcgcct caccgcgtgc
     5761 acgccgtgct ttcgcgccga agccggcgcg gcggggaaag acacccgcgg catgatcagg
     5821 cagcatcaat tcaccaaggt cgagctggtc tcgatcacca cgccggaaaa atcgaaggaa
     5881 gagcacgaac gcatgctcgc ctgcgccgag gaggtgctca agaaactcga attgcactac
     5941 cgcgtggtta cgctttgtac cggcgacatg ggtttcgccg cccagaaaac ctacgacatt
     6001 gaagtgtggc tgcccggcca gaatgcctac cgcgaaattt cctcctgctc gaactgcggc
     6061 gagtttcagg cccggcgcat gaatgcgcgt taccgcagca aggatggcgt gcggcatgtg
     6121 cacacgctca acggctcggg cgtggccgtc ggccgcgcgc tcatcgcggt gatggagacc
     6181 tttcagcagg agaatggctc gattgcggta ccctccgcgc tcgcacccta catgggcgga
     6241 ttgacgaaaa tcgagcggac ataatgcgca ttctcgtaac caacgacgac ggcatccatt
     6301 cgccggggct cgctgcctgc gagaagattg cgcgcgcgct ctccgatgag gtttggatcg
     6361 tggcgccgga aatagaccag tccggcgtgt cgcattccct gtcgctgaac gatccactgc
     6421 gcatgcgtga agtgggcgag cgccatttcg caatcaaggg cacgccgacg gactgcgtca
     6481 tcatgggcgt gcgctatctc atgaaggaaa agcccgatct tttgctctcc ggcgtcaacc
     6541 gcgggcgcaa ttgcgcggaa gacgtaactt attcgggcac ggtcgccggc gccatggaag
     6601 gcgcggtgct cggcataccg tcttttgcgc tttcgcaggc ctattccttc agcaccaagc
     6661 gtttgccttg ctgggatacc gcgatcaagt tcgcgcccga tctgatcaag cgcgttctcg
     6721 agacgggaat gccgcgcgac gtactggtga acgtgaattt tccggattgc ccacccgatg
     6781 aagtcgccgg cgtgtcggtg gcaatgcagg gcaaacggga ccaggagctt ttgcgcatcg
     6841 atgcccgcca cgacggacgc ggcaatccct attattggat tgcgttcggc cgtggcggag
     6901 tagtcggcgc tgctcccgga agcgatctcg ccgcgctaag tgaaaatcgg attgcggtga
     6961 caccgttgcg gctcgatctg acggacgagc ctttcatgac aaaattggca gaggtgttcg
     7021 gctaagccag cagtccggcc agcgtcgtct tgagttgctc ggcctgaaac ggcttctgca
     7081 gggcagggcg ccctcgataa gcttcgggca ggctgcgttc gccgtatccg gttacgaaga
     7141 cgaacggcaa tccacgctcg gtcagaatat cggcgacggg ataaatttcc tgcccgtcaa
     7201 gattgacatc gagaatggcg gcattgaatt cgccgctctt ggcgatttgg cttgcctccg
     7261 agattgttcc tacggcggca gcgaccccat agccgagctc ccccaacatg tcctcgagca
     7321 acatgcgaat caaatactca tcctcgacca cgagaacgcg tggcgccggc gccgatgaac
     7381 ctgtcattgg gtatctcccg cccttcaact cggcatcagc cgcagggttc caccttagct
     7441 ccaattccgg caaacatgct aataactcca ataaaggggc ctaaacgtgt ctaaattgcc
     7501 gaccaacgag caggacgatg accgcatgga attcctgctg acgttgcgac gaagaggtat
     7561 tgcggaccag gcggtgctgc gggccatgga cgaggttccg cgcgagcgct tcgtcgacgc
     7621 gggctttttg agaagtgcct acgccgatca ggccctgccg attgcctgcg ggcagacgat
     7681 cagtcagccc tatgtcgtag cttacatgac cgagcagctt gccgtgcagc ccaatcaccg
     7741 tgtgctcgag gtcggtaccg ggtccgggta tcaggccgcc gttttgtcgc gccttgctag
     7801 agaagtggta accatcgagc gataccgcac attggccgat caggcgcagg agcgtctgag
     7861 gtcgttaggc tatgacaatg tcgatgtggt tgtgggcgat ggcttcaccg gggtgccggg
     7921 cagggctccc tatgatcgca ttattgtcac cgccgccgca gagatagtcc ccgaaaccct
     7981 gctcgaccag ctcgtcgaga atggtgtcat gattttgccg cttgggtcgc aggatggctc
     8041 acaacatctg atcaagctta ccaagtcgca aacaggaacc tggcgggaaa atctgatccc
     8101 cgtgcgtttc gtgccgatgt taccgggtca ggcgcaagaa ctgtgacgtt ttcgcgtcca
     8161 atgtccggcc ctgatgcgcc cgaatccgcg cgttaattat taaagccttg tttactcgcg
     8221 gctggtttat ttcgaactct accgttgttg cgtacgagtg agtaaccaca tgccgcgccc
     8281 ccaggtggac tcttgcccgc gtgcttggcc gcgcgccttg gccttcgcct tggttggtat
     8341 cgccgccgct ggctgtgccg actccgcccg cttcgcatcc agctcctaca gcagcgatcg
     8401 ccccgcaccg ccgcaaaacg ttgctgcgat gccggcacct tcggcaagct cgcgtattga
     8461 ggcgcaaccg ctgagtccgc ccgccgccgt ggcagctgcc ccgacgtatt acggcgccgc
     8521 aagtccagcg acctatcgtc ctagcggcag atattcggaa accaccggtt cttcggcgag
     8581 cgttccgccg ccttcgcatc attggacgtg gaatggcggc tcagccgtga cggtcggtta
     8641 cggcgaaacc gtcgatagca ttgcccgcag gcatggcgtg cccgcatcgg cgatcctgca
     8701 gaccaatggc atccgcgatg cttcgcagat caggcccggc cagcgcctgg ttatcccgcg
     8761 gcacgtgacg agcgggacac agaccgcttc gcggttttca tctccggttg ccggcaaggt
     8821 tcacatcgtg aggtccggcg aaacgctgat gagcatctcg cgccgcaccg gcgtgtcggt
     8881 cactgcgctc gcgcgggcga accgtcttca taccacgagc aggctcagcg ttggcgatcg
     8941 cctgaccatt ccgtccggcg ggtatgccgt tgcatctgcg catgccactt ccgcaccgca
     9001 agctgcgcaa gcgcggcccg cgccactgca aaaagttgcc agcctcggtc cggtgcatac
     9061 tgcgaatgtc gcgaaagaag accagccgca aaaaccggaa accgcggtca ggactgcgga
     9121 gccggccggc gccatgccgt cgttccgttg gccggttcgc ggccgtgtga ttgccggctt
     9181 cggcagcaag ccgaacggca cgcaaaacga cggcatcaat ctggcggttc cggaaggcac
     9241 gccaatcaaa gccgccgatg atggcgtcgt cgcttacgcc ggcaatgaac tcaagggtta
     9301 tggcaacctg gtgctgatcc gccacgccaa cggctttgtc tcggcctacg ctcacgcgag
     9361 cgaaatcatg gtcaagcgag gcgacaccat caagcgtggg caggtgattg cgcacgcggg
     9421 ccagacgggc aatgtgacct cgccgcagtt gcacttcgag atccgaaaag ggtcgacgcc
     9481 ggttgatccg acgcaatatc tcggcggtgc gtagcgagct cccccacgaa ctccgcgtgg
     9541 gaaagagcgg ctgaacatca ggtcttcaga gcaacgccaa ggcgtccggc gagatcctgc
     9601 acgaattgcc atgccacgcg acccgatcgc gatccgcgcg ttgtcgacca ttccagcgcc
     9661 tcccgatgca gggattcacc gcgagctgga attttgtaat gcgctacgta gccatcgacc
     9721 atcgccagat attcgtcctg gctgcagcga tggaagccga gccaaagacc gaaccgatcc
     9781 gataacgaca ccttttcctc caccgtctcg cccggattga tcgccgttga gcgttcgttc
     9841 tccatcatgt cgcgtgacat catgtggcgt cggttcgagg ttgcataaaa gatcacgttg
     9901 tcagggcggc cttcgatccc gccttcgagc accgctttga gcgatttgta ggtggtatcc
     9961 tcagcgtcaa acgacaggtc gtcgcaaaac acgatgaagc ggtgcgagga accgcgcgtg
    10021 agggccatca aagcggggag gctgtcgata tcctcgcgat ggatctcaat cagcttcagg
    10081 ggcccgttgc ttatcttgcg tgcgagggct gcattcacgc ctgcatgcgc cgccttgacc
    10141 agcgatgact tgcccatgcc gcgggcgccc cacaaaagcg cgttgttggc aggcaggccc
    10201 ttggcaaagc gttcggtgtt ttcgaccagc acatcgcgaa cccgatcgat ccccttgagc
    10261 agcgacatct cgacgcggtt gacgtgcgaa accggcgaca gccgtccgtc cggatgccag
    10321 acgaaggcgt ccacggcgct gagatcgggc aggattgacc gttgcggtgc gagcctatcg
    10381 agcgcggctg caatgcggtc gagcgcatcc gcctgctcct ccgggcggtc gcccgctttt
    10441 ggttttcgca tggagccccg cgacgatttg gacttggact tggccatcgc tgtttccgtg
    10501 aaatcgcgct gctcttagcg gggtcgcgtt gcccccgcaa gcgggcttgc agggaaatgg
    10561 ttgaaaatag aggctttcag ggggttaagc ggcgttgcaa ttggacgggc ggccgctata
    10621 gtccgcgcga aattcaagcg ccgcccaggc ggccgggaaa tcaccaggga aaagggttgc
    10681 gatgttcata acgcctgcgt ttgcgcaagg gcttggtgca ggcgacagcg gcatgctgat
    10741 gtcgctgctg ccgttcgcgc ttattttcgt gatcatgtat ttcctgatcc tgcgcccgca
    10801 gcagaagcgg gtgaagcagc accaggaaat ggtgaagaat gtgcggcggg gcgacaccgt
    10861 cgttaccaac gggggcctta tcggcaaggt caccaaggtg atcgacgacg accagatcga
    10921 aatcgaaatc gcggacgacg tgcgcatccg ccagatgcgg cagatggtgg ccgacgtccg
    10981 tgccaagggt gaacctgtca aggaaga
//
LOCUS       DATDHO010000532         2369 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_25096, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000532 DATDHO010000000
VERSION     DATDHO010000532.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25096"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..560
                     /locus_tag="VIY07_10200"
     CDS             <1..560
                     /locus_tag="VIY07_10200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382160.1"
                     /translation="GLGDILGQIFGRGFGPSTPSPSPQQTPAPGGQTIPTGPEAQPGD
                     VLGQILQELQKGIQEGRIKPVIIGGGPIQIPMPGGQGGPVQIPMPGGQGETIPSGQQA
                     PGGDILGQILRDLLGGAGGPARTPQPTGQSGDLKDLSDLSRKLGAMDSVGEKVFGERF
                     EVGRDIEQDHLDNIQRVFDRFSGAR"
     gene            complement(620..1201)
                     /locus_tag="VIY07_10205"
     CDS             complement(620..1201)
                     /locus_tag="VIY07_10205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4126 domain-containing protein"
                     /protein_id="HEY6382161.1"
                     /translation="MTGSDLALSIALGVALAAATGFRVFLPMLIVSGAAYTGHLSLDN
                     SFAWLGTPFALTMLGAAALVEVLAYYIPGVDNLLDAVATPAAFVAGTVVSAAVMTDLP
                     PMVKWMAAVIAGGGAAGLTQSVTAMLRAKSTVFTGGFGNPVIATGELGGSLLLSLLAL
                     AAPLAAFAVVILLLWLALRLVRQLREGTHRANN"
     gene            1347..1574
                     /locus_tag="VIY07_10210"
     CDS             1347..1574
                     /locus_tag="VIY07_10210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382162.1"
                     /translation="MPTQLRLFSTTRSENFSRLEKEVNDWLAAKGDRIQPVNSQTATC
                     AIANGESGKQSQAVIVALWYLEPPERERGHH"
     gene            1642..>2369
                     /locus_tag="VIY07_10215"
     CDS             1642..>2369
                     /locus_tag="VIY07_10215"
                     /inference="COORDINATES: protein motif:HMM:NF037279.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WcbI family polysaccharide biosynthesis putative
                     acetyltransferase"
                     /protein_id="HEY6382163.1"
                     /translation="MHQLRGQSQFVKLYHMEISAFRLSIANSAEKRIERTKIMHAKHS
                     STARVVFIGNCHMAKLTVLYRVGFAAPESNTAYYISNQLDLTEDDRKALRDADCIAWQ
                     VVDGATNVVIEDLPRSCDVVKVPLVSATFLWPFAGRPHPRNTRLPYAENGPFDSELGD
                     VFLNGLISQGVSAEDAVGRYLSLDFSTRTDLDRLFELWFNGQRRRDSACGFEIADFVA
                     QSFRTEQVFLTPHHPNLPVFQSLAR"
BASE COUNT          523 a          696 c          686 g          464 t
ORIGIN      
        1 gcggactagg cgatatcctc ggccagattt ttggacgggg gtttggcccc tcgaccccat
       61 ctccgagtcc gcaacagaca cccgcgccgg gcggacagac tattccgacc ggccccgaag
      121 cgcagcctgg agatgttctc ggtcaaatcc tgcaggaact gcagaagggc attcaggaag
      181 ggcgtatcaa gcctgtgatc atcggcggcg gacccattca gattcctatg ccgggcgggc
      241 aaggcgggcc tgtccagatc cccatgccgg gcgggcaagg cgaaacgatt ccttccggtc
      301 agcaagcacc gggcggcgac atcctcggcc aaatcttgcg tgacctgctg ggcggtgctg
      361 gcggccctgc tcgcacgccg cagccgaccg ggcaatccgg ggacctgaaa gacctgtcgg
      421 atttgagcag gaagctcggt gcgatggaca gcgttggaga aaaagtgttc ggcgagcgct
      481 tcgaggttgg tcgagacatc gagcaggatc atctcgacaa catccaacgt gtctttgatc
      541 gtttctccgg cgcgaggtga cactgatgga cgatcaaaac tctgcggcag aaaacgattg
      601 gctgtgccgc tgtttgtttc tagttgttcg ctcgatgcgt tccttcacgc agctggcgga
      661 ccaggcgaag cgcgagccac aatagcaaga taacaactgc gaacgccgcg agcggcgccg
      721 ccagagccag cagcgacaac agaagtgaac caccgagttc cccggtcgcg ataacgggat
      781 tgccgaagcc gcccgtgaag acggtcgatt tcgccctaag catggcggta acgctctgtg
      841 taaggccggc ggcgccgcct cccgcaatga ccgccgccat ccatttcacc atcggcggga
      901 ggtcggtcat gaccgccgct gacacgacag tgcctgcgac aaatgcagcg ggagtggcca
      961 cggcgtcgag caggttgtcg acacccggga tgtaataggc cagcacttcg acgagcgccg
     1021 ctgcgccgag cattgtcagc gcaaagggcg ttccaagcca tgcgaagcta ttgtccagcg
     1081 ataaatgccc ggtatacgcc gctccgctga caatcagcat cggcaaaaac acccgaaagc
     1141 cggtcgcagc ggccaacgcg acgccaagcg caatagatag tgcgagatcg gagccggtca
     1201 caatgatcca accttgttca gtgccaatat tacgccgttt tcgcctcctg tcgcgagcgc
     1261 tgctctagtg aagacagatc cggcagttct ccaggaactc ctgtaaccgg aggccattag
     1321 ctccggtgaa cttttaggag aacgctatgc cgacacaact caggctgttt tccaccaccc
     1381 ggtccgagaa cttttccagg ctcgagaaag aggtgaacga ttggctcgcc gccaagggcg
     1441 atcgtatcca gccagtgaac agtcaaacgg caacttgcgc catagcaaac ggtgaaagcg
     1501 gcaaacaatc ccaagcggtc attgtcgcac tttggtatct cgagccaccc gagcgggaac
     1561 gcgggcacca ctgagacggg cggaggcccc tgagctgctc gcgttaacag acttaactag
     1621 cgggttttgg ccagctgttg tttgcaccag ctcaggggcc aatcacaatt tgtcaaactt
     1681 tatcacatgg aaatatctgc ttttcgtcta tccatagcca attcggccga aaagcgcatt
     1741 gaaagaacga aaatcatgca cgcgaagcac tcgagcaccg cgcgagttgt tttcatcggt
     1801 aattgccaca tggctaagct cacggtgctt tatcgtgtgg ggttcgctgc gccagaatcg
     1861 aacacagcct attacataag caaccagctc gacctgacag aagacgatcg aaaagcgctg
     1921 cgcgatgcag actgtattgc ttggcaagtc gtcgatggag cgaccaatgt tgtgatcgaa
     1981 gaccttccgc gatcatgcga cgtggtgaag gtgccgctgg tctcggcgac gttcctatgg
     2041 ccttttgcag gtcgcccgca tccgcgcaac acgcgtctgc cgtatgcgga aaacggaccc
     2101 ttcgattcag agctcggaga cgtttttctg aacggactga tcagccaagg tgtcagtgct
     2161 gaggatgcgg tcggacgtta cctctctctt gatttttcga cgcgtactga tctcgatcgc
     2221 ctattcgaac tctggtttaa cgggcagcgc cgtcgcgatt ccgcatgcgg gttcgagatc
     2281 gcagatttcg tcgcgcagtc gttccggaca gagcaggtct tcctcacgcc gcaccatccc
     2341 aatcttcctg tgttccagag tcttgcacg
//
LOCUS       DATDHO010000533         1578 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_467591, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000533 DATDHO010000000
VERSION     DATDHO010000533.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467591"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            172..1185
                     /locus_tag="VIY07_10220"
     CDS             172..1185
                     /locus_tag="VIY07_10220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382164.1"
                     /translation="MKILKLVLAAGAALTLGMTTASAQQKITFTLNWVAGGDHAPYFY
                     AQKMGWYKDAGVNVEFETGRGSAASAQKVAAGSSQLGLSDMAGVLLFRGKGMDLVGLM
                     NVYANSPQGLYWLKSSGIKSVKDLAGKKIGNPAGDGARTMWPALAKKVGIDPNSVTWV
                     NIDANAKLGALKAKTIDATTSFFNLHHVFARELGADMGFLAWKDDGVNPYGNSIIANG
                     AWLKANQDTAAKFTKVTQKAFAECAKNPDPCVKALVEANSGLLYDNELTNWHLVSILM
                     SDDTSRNVALGWHDDKRMADDYKLVDEFLKMEKPYDIKTAYTNEYLDKSIKMPPINPP
                     KLY"
     gene            complement(1239..>1578)
                     /locus_tag="VIY07_10225"
     CDS             complement(1239..>1578)
                     /locus_tag="VIY07_10225"
                     /inference="COORDINATES: protein motif:HMM:NF037026.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382165.1"
                     /translation="HLRGRLPKVELIAERRGEIAGFMLGRNGRSASQIGPRVAEDDVA
                     ARVLLARALFALEGPVYLDLADAKTDICAWLAKSGFTSQRPLTRMVLGRATGFEDTAR
                     TFAVVGPEFG"
BASE COUNT          342 a          466 c          462 g          308 t
ORIGIN      
        1 cgaatcccgg gttgctttgg tttcgttctg cttcgctgca cgtcggcgcc gttgacaggc
       61 ctacgcggcc aatcctatcg tttgaggtaa ccacgcagtt accacggatc tttgccgtcc
      121 gtcgaggaca tggcgagtca tcggcgtcac cgctgcggga ggaggaacat catgaaaatc
      181 ttgaaactgg tactggcggc cggtgcggcg ctcacgttgg gcatgacgac ggcttcggca
      241 cagcagaaaa tcaccttcac cctcaattgg gtcgccggcg gggaccatgc accgtatttc
      301 tatgcccaga agatgggctg gtacaaggac gcgggtgtca acgtcgagtt cgaaaccggc
      361 cgcggctccg ctgcctccgc gcagaaagtt gcggcgggct cttcacagct tggtctctcc
      421 gatatggccg gcgtgctgct attccgtggc aagggcatgg atctcgtcgg tttgatgaat
      481 gtctatgcca actcgccaca gggcctgtat tggcttaaga gttccggtat caagtcagtc
      541 aaggacctcg ccggaaagaa gatcggcaac ccggccggcg atggcgcccg cactatgtgg
      601 ccggcgctgg ctaagaaggt tggcatcgat ccaaactcag ttacttgggt caacatcgac
      661 gccaatgcca agctcggtgc actgaaggcc aagaccattg acgccaccac gtcattcttc
      721 aacctgcacc acgtattcgc gcgcgagctc ggcgccgaca tggggttcct cgcctggaag
      781 gacgatggcg ttaatcccta cggcaattcg attattgcca acggcgcatg gctgaaggct
      841 aatcaagaca ccgctgccaa gtttaccaag gtgacgcaga aagcttttgc cgaatgcgca
      901 aagaatccag atccctgcgt caaggcgttg gtcgaggcga acagcggcct gttgtacgac
      961 aacgaactga ccaactggca cctcgtcagc atcctgatga gcgacgacac ctcgcggaat
     1021 gttgcgctag gttggcatga cgacaaacga atggcggatg actacaaact ggtggacgaa
     1081 tttctcaaga tggaaaagcc gtacgacatc aagacggcct acaccaatga gtacctcgac
     1141 aagagcatca agatgccacc gatcaatccg ccaaagttgt actgagcgaa aaatttcgag
     1201 gttgtggcgc cggccgcatc gcggtcggcc tttttctttc agccaaactc tggcccgact
     1261 acggcgaacg tccgcgcggt atcttcaaaa ccggtcgccc gtccaagaac catgcgggtg
     1321 agcggccgtt gcgacgtgaa gccagatttc gcgagccagg cacaaatgtc ggttttggcg
     1381 tccgcgaggt cgagatagac aggtccctcg agagcgaaga gcgcgcgcgc tagcagcact
     1441 cgcgcggcga catcgtcttc tgccacgcgc ggtccgattt gcgaagcgct gcgcccgttc
     1501 cggccgagca tgaatcccgc gatctcgccg cgccgctcgg caatcaattc gaccttcggc
     1561 agccggccgc gcaagtgt
//
LOCUS       DATDHO010000534         8999 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_125061, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000534 DATDHO010000000
VERSION     DATDHO010000534.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8999)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8999)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8999
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125061"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            118..1506
                     /locus_tag="VIY07_10230"
     CDS             118..1506
                     /locus_tag="VIY07_10230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006337024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEY6382166.1"
                     /translation="MTTLTTAEAVAIDGFRGRLISADNADYDIARAVWNGAIDRRPHL
                     IARCIGTADVVGAVRFARDHDLEIAIRGGGHNVAGTAICDDGIVIDLSAMRAVRVDPA
                     NRRAWVQGGALWGDVDHETQPHGLATTGGIVSHTGVAGLTLGGGIGWLMRKHGLTVDN
                     LLAVDIVTADGELLRASEDEHPDLFWALRGGGGNFGVVTSFEFRLHSVGPAVLAGPIL
                     WDASDAREVLRFYRDFIRDAPDELGTVVRFGAVPPLPVIAEDLHWRPVVMVGTCYAGR
                     IEDGEQALLPLRASRTPLLDLVGPTPYVGFQSALDSTVVHGWNYYWKSTHLPELRDEL
                     IDVIVEHAFSCSSPRSYVAMFHLKGAVSRVSESRTAFGNRQASHAITLDSVWRPGEDF
                     GDRDTAWTRRFFAALGQFREGVYVNFLGGDEDPDRVREAYGDSIYDRLVDVKTTYDPD
                     NVFHHNQNIRSG"
     gene            2052..3059
                     /locus_tag="VIY07_10235"
     CDS             2052..3059
                     /locus_tag="VIY07_10235"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382167.1"
                     /translation="MRFLRSAPVGACAFGLFGVSAAIAAEPVKIRMSWVAPVANWASI
                     ILEKKDLAKHMGKSYTVEAVRYQGTPQMITAIANNELEVSNLAYSSLAIAIENAGLDD
                     IRVIADEFQDGVPGYYTQEYFVRKDSGINKVEDLKGKVIGTNAGGSAVDVAMRTMLRK
                     HGLEEKRDYTMVESPLPAMPAVLLEKKADLVPAVLPFAFNPKLREEGKVLFKQSEALG
                     VTQMIVWTARKSFIDKNRAAMVDFMEDMLRITRWYLDPKNHAEVAQIASKITKAPPER
                     FDWLFTNKDTYRDPNLLPNLEALQRNVDVTRELGFVKNKIDVKKYSDLSLVQEAAQRL
                     K"
     gene            complement(3121..3639)
                     /locus_tag="VIY07_10240"
     CDS             complement(3121..3639)
                     /locus_tag="VIY07_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1993 domain-containing protein"
                     /protein_id="HEY6382168.1"
                     /translation="MYTMSQASLPAFEIALNALSGVLDKAATYAAAKKVDPSVLLGWR
                     LAPDMFALGRQIQVACDQAKNGSARLAGVEPPKFDDTETTLEQFKERIARTIGFLKTL
                     DGKALDASSEREITFPLGQNKGQMKGCDYLNHFVLPNFYFHVTAAYTVVRNFGVDVGK
                     RDFIGAIPLKLI"
     gene            complement(3719..4399)
                     /locus_tag="VIY07_10245"
     CDS             complement(3719..4399)
                     /locus_tag="VIY07_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016706 - 2-oxoglutarate-dependent
                     dioxygenase activity [Evidence IEA];
                     GO_function: GO:0031418 - L-ascorbic acid binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-dependent dioxygenase"
                     /protein_id="HEY6382169.1"
                     /translation="MMVHVPNVLTAEQVARCREVMEKAAWVDGRVTAGHQSAKVKNNL
                     QLPENSTEARGLGTMVVEALAKNNLFMSAVLPKQVFPPLFNRYDAGMTFGAHVDNAIR
                     GIPNSGIRIRTDVSSTLFISRPEDYDGGELVVEDTYGTHNVKLPAGDMIVYPATSLHY
                     VTPITRGSRIASFFWTQSMIRDESRRSLLFDMDMAIIKLQRDHPDHVSLVELTSIYHN
                     LLRQWAEL"
     gene            complement(4417..6636)
                     /locus_tag="VIY07_10250"
     CDS             complement(4417..6636)
                     /locus_tag="VIY07_10250"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY6382170.1"
                     /translation="MTVSAASAQEGGSSGLQLPTIDVTGDQGGYQATQQSINRLQTPL
                     LNTPQTINVVPQQEIQERRLTTMEEALRTVPGITFSAGEGGQQGDSPIIRGFVARGDI
                     FRDGFRDPGWYTRDLFDVDRVEVYKGPSSFAFGRGSTGGAINNVSKLPTGATYTEGTA
                     TGSSVGGYRFDLDASGKRDNISGRIAALYTDVPTPTRDNVWTRRWGVAPSVTGQLDDN
                     TKATLAYIYQGEEGAPDYGWPYLPQPGYRTTTGALVNPGYNGNGTPVTPVPINRNTWF
                     GIANGPLRDIVTTETHILTATVQRDLGNNFKITNGTRFLLNDRFGRNTAPRGLANAAM
                     QPFTSGLTTGTGGNGIGYPVDLMTIARERRERETDATFAVNATDLTGKFDTGIINHTL
                     TTGIEVSRETRNQTRTDLCVAANLACYTSLVNPEAGGVPATGFTVVPGNNTLSTDFAA
                     YVIDQMKITQYFELLGSFRFDRFSTHYVDASAAANQNNLKRTDDLPSYRFGAVYHPTP
                     SSSVYFVYGNSYNPAAELGTLSGSPTNAASVTLAPEKNVSYEAGVKADVMNGTLSLTG
                     AVFRIEKTNLRIPNDPTLPTAQQFLVLDGLARVDGFELGAVGKLTDQWQVIAGYSYLD
                     SRILKTTNQAELYRWLPNAPRNNLALWTTYDVTPKWTVGAGATYQSDAFVNTTNTAFV
                     PAYWKFDAMMSYKVDNKSTIQFNIYNITNEFYFGQYYQGHAVPASGRWASLSYRVRW"
     gene            7035..8183
                     /locus_tag="VIY07_10255"
     CDS             7035..8183
                     /locus_tag="VIY07_10255"
                     /inference="COORDINATES: protein motif:HMM:NF015863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HEY6382171.1"
                     /translation="MADTRAAKLRRLLLNVHLWIGVGLATMLIPISISGALLVWHDNI
                     DTWINPHRYAVTGAQVALPPTVYLAKAAEAVAIDPTGLRANALRYPEPGWPVRVTMRA
                     QGREPGGRPKIVTVFLDPPTASVLDVMEFRSSFFGFLHVFHENLTIPEYSGRQIVGWV
                     GVGMLIMSLTGLWLWWPRGSDLLHALRWKRSTRFTFNLHHLLGFWISIPLAVVSLTGV
                     YLAFPQTARDAMSSITTMNQQPARGGQPAQHTSLTADRALEVALKGAPGATPVALFLP
                     LQQRGEAALNWRVQMAERGETVSVTVDDRSGQSTVTRPQLGDRTAAWIRWIHEGSHSG
                     PAWAVIVFLTGVFPAVFAVTGVIMWLRKRADRKALKAKRANPQLRPAE"
     gene            8224..>8999
                     /gene="exbB"
                     /locus_tag="VIY07_10260"
     CDS             8224..>8999
                     /gene="exbB"
                     /locus_tag="VIY07_10260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tonB-system energizer ExbB"
                     /protein_id="HEY6382172.1"
                     /translation="MSRYSHRYHVAVAAVVAISLILPAPLFGQTTPAEPPSTPAASPP
                     TTQQVAPAASDPVPAAQPSAPQASAASPDIALKLPRDLTPWGMFMAADIVVKAVMVGL
                     AFASVLTWTIWFAKAIELMIARRRMRAAIDALNQARSWSEAVARMKGRDNGPAVLLRA
                     ADAELRLSADALSPTGVKERIASRLERLEAAAGRSMIRGTGILATIGATAPFVGLFGT
                     VWGIMNSFIGISKSHTTNLAVVAPGIAEALLATALGLVAA"
BASE COUNT         1723 a         2716 c         2754 g         1806 t
ORIGIN      
        1 cgtatgttct cacaacacca gtgttgcgcc tctgccttcc gttgtgaagt ccagattctt
       61 gactatacag ccccggtccg cggtggtccg atctggcttc gagaaacgga ggacacgatg
      121 acgacactga cgaccgcgga agccgtggcg atcgacgggt tccgaggccg gctcatcagt
      181 gccgacaacg ccgactacga catcgcccgt gcagtctgga acggtgccat cgaccggcgc
      241 ccgcacctga tcgcccgatg catcgggacc gccgacgtgg taggggccgt gcgtttcgcc
      301 cgcgaccacg atctggagat cgccatacgg ggcggaggcc acaacgtggc gggcaccgcc
      361 atttgcgacg acgggattgt catcgacctt tcggcaatgc gggccgtgcg ggtcgatccc
      421 gctaaccgca gggcctgggt gcagggtggt gcgctgtggg gagacgtcga ccacgagacg
      481 cagccgcacg gtctggccac caccggcgga atcgtgagcc acaccggagt cgccgggctc
      541 accctcggcg gtggcatcgg ctggctgatg cgcaagcacg gtctcacggt cgacaacctc
      601 ctcgccgtgg acatcgtgac ggccgacggc gagctgcttc gcgcgtccga ggacgagcac
      661 cccgacctgt tctgggcgtt gcgagggggc ggcggcaact tcggcgtggt cacctcgttc
      721 gagttccgtc tccactccgt ggggcccgcc gttctggctg ggcccatcct ctgggacgcg
      781 agcgacgcca gggaagtcct ccgcttctac cgcgacttca tccgcgacgc tcccgacgaa
      841 ctcggcacgg tcgtgaggtt cggcgccgtg ccgccgctac cggtcatcgc cgaggatttg
      901 cactggcgcc cggtggtgat ggtcggtacc tgctacgccg gacggatcga ggacggtgag
      961 caggcgctcc tgccgctccg tgcatcccgc actcccctcc tcgacctggt cgggcccacg
     1021 ccgtacgtcg gattccagag cgcgctcgac tcgaccgtcg tccacggttg gaactactac
     1081 tggaagtcca cacacctccc cgagctccgc gacgagctca tcgacgtaat cgtcgagcac
     1141 gcattctcct gctcgtcgcc gcggtcgtac gtagcgatgt tccatctaaa gggggcggtg
     1201 agccgagtgt ccgagagcag gaccgcgttc ggcaaccggc aggcgtcgca cgcgatcacc
     1261 ctcgatagtg tgtggcggcc cggcgaggac ttcggcgacc gggacactgc ttggacgagg
     1321 aggttcttcg ccgccctcgg ccaattccgc gaaggcgtct acgtcaattt cctcggcggc
     1381 gacgaagacc ccgaccgggt ccgcgaggcg tacggcgact ccatctacga ccggctggtg
     1441 gacgtgaaga ccacgtacga ccccgacaac gtcttccacc acaaccaaaa catccgctcg
     1501 ggttgactca gaccgaagca ccggcggatt cagctgtggc gggagccgct ggaacgacga
     1561 ctgccagatc ctcgtctgcg cgggcatagc ggcacagcca gtaacttgcg gcgatggccg
     1621 caaaagcgac ggtggctcac ccaccaaatc gatgaagtag tgcgcgccgt cgatcggcgt
     1681 tgctagaatg agtgagacat tgagcgcggc tgcggggccg cgcacgtggt tatggggcgg
     1741 atgtgctaaa aattcttttt cgcaatgcgt tgtccctcgg tagtcaaccg ttgatctaac
     1801 ttttccctaa atgcggcttt cgatcacgca aaccgcgact taaacggttt gccattcgtt
     1861 aaaagccggt cgttaggccc gtgcgaatgt ctcgccattg cgccaaacta acgcagccca
     1921 cgtaccggat cgtgggaccg catcttcaag ggctaccttg caaaaatcgg ttggacctcc
     1981 gacaatcttc gctcgcggcg agaagcttgc gatttttgcg cgcaagcccg gcgaacactg
     2041 ggaggaagat catgcgcttc ttgagatccg cgccggttgg cgcgtgtgct ttcggtcttt
     2101 tcggcgtcag cgctgccatc gctgccgagc ccgtcaaaat ccgcatgtca tgggtggcgc
     2161 ccgttgccaa ctgggcgtcg atcattctgg agaagaagga cctggccaag catatgggca
     2221 agtcctacac ggtcgaagcg gtccgctatc agggcacgcc gcaaatgatc acggcgattg
     2281 ccaataatga gctggaagta tcgaacctcg cctattcgtc attggcgatc gcgatcgaaa
     2341 acgccggcct cgatgatatc cgcgtcatag ccgacgaatt ccaggatggc gtgcccggct
     2401 attacaccca ggaatatttc gtccgaaagg acagcggcat caataaggtc gaggatctca
     2461 aaggcaaggt gatcggcacg aatgccggcg gcagcgcggt cgatgtcgcc atgcgaacga
     2521 tgctgagaaa gcatggtctt gaggaaaaac gcgattacac gatggtcgaa agcccgcttc
     2581 cggcgatgcc tgccgtgctg ctcgagaaga aagcggatct cgtccccgcg gtgctgccat
     2641 ttgccttcaa tcccaagctc cgcgaggaag gcaaagtgtt gttcaagcag agcgaagcgc
     2701 tgggcgtgac gcagatgatc gtctggaccg cgcgcaaatc tttcatcgac aagaatcgcg
     2761 ccgcaatggt cgactttatg gaagacatgt tgcgcatcac gcgctggtac ctcgacccga
     2821 aaaaccatgc cgaggtagct caaatcgcct cgaagatcac gaaggcgccg ccggagcggt
     2881 tcgactggct gttcaccaac aaggacacct atcgcgaccc gaacctgctt ccgaaccttg
     2941 aagcgctcca gcgcaatgtc gacgtcaccc gcgagctcgg cttcgtgaaa aacaagatcg
     3001 atgtcaaaaa gtactcggac ctgagcctgg tacaggaagc ggcgcagcgc ctgaaatagc
     3061 gtttgccagt cttgcttacg ttagccccgg gcggtcgccc ggggctaatc ctgcagtcag
     3121 ctagatcagc ttgagcggaa tcgctccgat aaagtcgcgc ttgccgacat ccacgccgaa
     3181 atttcgcaca accgtgtagg cggcggtgac gtggaagtaa aagtttggca gcacgaagtg
     3241 attaagatag tcgcagcctt tcatctggcc cttgttttgc ccgagcggaa aagtgatctc
     3301 acgctcggat gaagcgtcta aggccttgcc atcgagcgtc ttgagaaagc ctatggtcct
     3361 ggcgatccgc tccttgaatt gctcaagggt cgtctcggta tcgtcgaact tcggcggctc
     3421 aacgccggcc aggcgcgccg agccattctt ggcctggtcg catgcgactt gaatctgccg
     3481 gccgagcgcg aacatgtcgg gagccagccg ccagccgagc agaaccgagg ggtcgacctt
     3541 cttcgccgcc gcgtaagttg ccgccttgtc gagcacgccc gagagcgcgt taagggcaat
     3601 ctcgaaagcc ggcaaggaag cctgggacat cgtgtacatg tgaattcctt tgggagcacg
     3661 atgcacgcgc gcattgaggc tgatgcatcg cggatggagc aaccgcaacc gggcgcggtt
     3721 atagctcagc ccactgccgg agcaaattgt gatagatcga cgtgagctcg accagcgaca
     3781 cgtgatccgg gtgatcccgc tgcaacttga tgatcgccat gtccatgtcg aagagcaatg
     3841 agcgcctgct ttcatcgcgg atcatgctct gggtccagaa aaacgacgcg atgcgcgagc
     3901 cgcgcgtgat tggcgtgaca taatgcaatg aggtcgccgg atagacgatc atgtcgccgg
     3961 cgggcagctt tacgttgtgg gtgccgtaag tgtcttccac cacaagctca ccgccgtcgt
     4021 agtcctccgg gcgtgaaatg aacaatgtcg aggacacatc ggtgcggatg cgtatgccgc
     4081 tgttggggat tccccggatc gcattatcga catgcgcccc aaatgtcatg ccggcgtcat
     4141 agcgattgaa cagcggcgga aacacctgtt tgggcagcac cgccgacatg aacaggttgt
     4201 ttttggccag ggcctccacc accatagtgc cgagcccgcg tgcctcggtc gaattctccg
     4261 ggagctggag gttgttcttc actttggccg attggtggcc cgcggtgacg cggccatcca
     4321 cccaggccgc cttttccatg acctcgcgac accgcgcgac ctgctcggcg gtcagcacgt
     4381 tggggacatg aaccatcatc gggattgcac ccgttcttac cagcgcacgc ggtaagacag
     4441 cgatgcccaa cggcccgaag ctggaaccgc gtggccctga tagtactggc cgaaataaaa
     4501 ctcgttggtg atgttgtaga tgttgaactg gatcgtggac ttgttgtcga ccttgtagct
     4561 catcatcgca tcgaatttcc aatacgcggg cacgaaggcc gtatttgtcg tattgacgaa
     4621 ggcgtcggac tgataggtgg caccggcgcc gaccgtccac tttggggtga catcgtatgt
     4681 cgtccagagg gccaggttgt tgcgcggagc gttcggcagc cagcgataga gctcggcctg
     4741 atttgttgtt ttgagtatcc tggaatcgag gtagctgtag cccgcgatga cctgccattg
     4801 atcggtcagt ttgccgaccg cgccgagctc aaatccgtct acacgcgcca ggccatcgag
     4861 caccagaaac tgttgggctg ttggaagagt cggatcgttg ggaatgcgca aattggtctt
     4921 ttcgatgcgg aagacagcgc cggtgaggct gagcgttccg ttcatgacgt cggctttgac
     4981 gccggcttcg taggagacgt tcttctccgg tgccagcgtc acgctggccg cgttggtcgg
     5041 gctgcctgac agcgttccga gttcggccgc gggattatag gaattgccat acacaaaata
     5101 gacactcgag ctcggggtcg ggtgatagac ggcgccgaaa cggtagctcg gcaagtcgtc
     5161 ggtgcgcttg agattatttt ggttcgccgc tgcactcgca tcgacgtaat gcgtggagaa
     5221 gcgatcaaac cgaaacgagc ccaacagttc gaaatattgg gtgatcttca tctggtcgat
     5281 cacgtaagcc gcaaagtcgg tcgacagggt gttgttcccc ggcaccaccg tgaagccggt
     5341 ggcgggcacg ccgcccgcct ccgggttaac caggctggtg tagcaagcga gatttgcggc
     5401 gacgcacaga tcggtgcgcg tctgattacg ggtctcccga ctgacctcaa ttccagttgt
     5461 cagcgtatgg ttgataatgc ccgtgtcgaa cttcccggta agatcggtcg cattgacagc
     5521 gaacgttgcg tccgtttcgc gttcccgacg ctcgcgggcg atggtcatca gatcgaccgg
     5581 atacccgatg ccattcccgc ccgttcccgt ggtcaggcca ctggtgaacg gctgcatggc
     5641 cgcgttggcg aggccgcgcg gggccgtgtt gcgaccaaag cggtcgttaa gcagaaagcg
     5701 cgtgccattc gtgattttga aattgtttcc cagatcgcgc tggacggtcg cggtcaggat
     5761 gtgcgtctcg gtggtgacga tgtcgcgcaa cgggccattt gcgatgccaa accaggtgtt
     5821 gcggttgatc ggcactggcg tgaccggcgt gccgttcccg ttgtagccgg gattcaccag
     5881 cgcacccgtg gtcgtgcggt agccgggctg cggcaggtac ggccaaccgt aatcgggcgc
     5941 gccctcttcg ccctgataga tataggccag cgtagccttg gtattgtcgt cgagttgccc
     6001 cgtgactgac ggtgcgacgc cccagcgccg cgtccagaca ttgtcgcgtg tcggagttgg
     6061 aacatcggta tagagcgctg cgatacgacc cgagatgttg tcgcgcttgc cgctcgcatc
     6121 gagatcgaag cgatagccac ccacggagct gccggtcgcg gttccttcgg tataagtcgc
     6181 cccggtcggc aatttggaga cgttgttgat cgcgccgccg gtcgagccac gcccgaacgc
     6241 gaatgatgaa ggccccttgt agacttcgac gcgatcgaca tcgaaaaggt cgcgcgtgta
     6301 ccagcccgga tcgcggaagc cgtcgcggaa gatatcgccg cgcgcgacga agccgcggat
     6361 gatcggactg tcgccctgct ggccgccctc accggcgctg aacgtgatgc cggggaccgt
     6421 gcgcagcgcc tcctccattg tggtgagacg gcgctcctgg atttcctgtt gaggcaccac
     6481 gttgatggtc tgcggggtgt tgagcagcgg cgtctgcagc cgattgatcg actgctgtgt
     6541 cgcctggtag ccgccctggt cgcctgtaac gtcgatggtc ggcagttgta atcctgaact
     6601 gccgccctct tgcgccgacg ctgctgatac agtcatcagc gaggccagac ttacggcggc
     6661 gcgaagccgc gaccgcgtgg tgaattccgc agtttgaatc gcgttcgact tcaatccccc
     6721 tgaacaatcg acgcgatcat cgcttgtgcc tgactgaata cttgaaatcc cctggttcat
     6781 tttgttcagc cccgaacgaa tactatactt tagaaccgta ataatcaggc tgattattag
     6841 gctatatttg gaaccacgaa ctgtattcgt cgtcaagaag aacctgatat tcaagcacta
     6901 ttcttaaatt ggaatatttc taatctacgt attactgttt tgaatactta aaaactgagc
     6961 tggactgctg ttttgtattt caccctgccc gcggtcgctg ttatagatgc gccgatattt
     7021 gcgaaggggt ggttatggcg gacacgcgcg cggcaaaatt gcgccgcctc ttgctcaatg
     7081 tgcatctctg gatcggtgtc ggattggcaa cgatgctgat tccgatctcg atatcgggcg
     7141 cgcttctggt ctggcatgac aacatcgaca cgtggatcaa tccccaccgt tatgcggtga
     7201 ccggcgcgca agtcgcgttg ccgcccacgg tctatctcgc gaaggccgcg gaagcggtcg
     7261 ctatagatcc gaccggtttg cgcgcgaacg cgctgcgcta tccggagccc ggctggccgg
     7321 tacgcgtgac gatgcgcgcg caaggtcgtg agcccggcgg gcggccgaaa atcgtgacgg
     7381 tgttcctcga cccgcccaca gcgtcggttc tggacgtcat ggaatttcgc tcgtcgttct
     7441 tcggattcct gcacgtcttc cacgagaacc tcacgatccc cgaatacagc ggtcgccaga
     7501 ttgtgggttg ggtcggggtc ggcatgctga tcatgtcgct gacaggcttg tggctttggt
     7561 ggccgcgcgg aagcgatttg ctgcacgccc tgcgctggaa gcgttcgaca cgcttcactt
     7621 tcaatttgca ccatctgctc ggcttctgga tctctatacc gctcgcagtg gtctcgttga
     7681 ccggcgtcta tctcgcgttc ccacaaactg cacgcgacgc gatgtcatcg ataaccacga
     7741 tgaatcagca accggcgcgc ggaggtcaac ccgcccaaca cacaagtttg accgcagacc
     7801 gcgcgctgga agttgcgctc aagggtgcac caggcgccac gccggtggcg ctgttcctgc
     7861 cgttgcagca acgcggcgaa gccgctctga actggcgcgt gcagatggca gagcgcggcg
     7921 aaacagtaag cgtaacggtc gacgaccgca gtggccagtc aaccgtcacc cgcccacagc
     7981 tgggcgaccg tactgcggcc tggatcagat ggatccacga aggcagtcac agcgggccgg
     8041 cctgggcggt catcgtgttt ttgaccggcg tttttccggc cgtttttgca gtcaccgggg
     8101 tcatcatgtg gctgcgcaag cgcgccgatc gtaaggcgct caaagccaag cgtgccaacc
     8161 ctcagctgcg accagccgaa tgaacatgtt agaatggtgg gggcggaaag gatcgaaagt
     8221 tcaatgagcc gttatagtca ccggtatcat gtggccgtgg cagccgtcgt tgccattagc
     8281 ctcatattgc ccgccccgct cttcgggcaa acgacaccgg ccgagccgcc ctcaacaccg
     8341 gctgcttcgc cacccaccac ccaacaagtc gcgcctgcgg cgtccgatcc tgttcctgcg
     8401 gctcaaccat ctgcacctca ggcatctgct gcttcacccg acattgcgct caaactgccg
     8461 cgcgacctga cgccctgggg catgttcatg gcggccgata tcgtggtcaa agccgtgatg
     8521 gtcggccttg ccttcgcctc ggtgctgacc tggacgatct ggtttgccaa ggccatcgaa
     8581 ctgatgattg cgcgccgacg catgcgcgcg gcaatcgatg cgctcaatca ggcccgctcc
     8641 tggagcgaag cagtcgcacg catgaaaggc cgcgacaacg gacccgccgt cctgctccgc
     8701 gcggcggacg ccgaattgcg tctgtccgcc gacgccctgt cgccgaccgg agtcaaagaa
     8761 cgcatcgcgt cacggcttga gcgccttgag gctgccgccg gccgcagcat gatccgcggc
     8821 accggcatcc tcgccaccat cggcgccact gctccattcg tcggattatt cgggaccgtc
     8881 tggggcatca tgaacagttt catcggcatt tcgaagtcgc acaccacaaa tctggcggtg
     8941 gtggcaccag gcatcgctga agcgcttctt gcaacagcgc tgggcctggt ggcagcaat
//
LOCUS       DATDHO010000535         1907 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_174064, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000535 DATDHO010000000
VERSION     DATDHO010000535.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1907
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174064"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VIY07_10265"
     CDS             <1..183
                     /locus_tag="VIY07_10265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382173.1"
                     /translation="SAVKDTPFPARTFIHQTLFLGLFASLSQADVGSASGAQYIRGRS
                     ARNRAPARHPDFNYMF"
     gene            273..965
                     /locus_tag="VIY07_10270"
     CDS             273..965
                     /locus_tag="VIY07_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382174.1"
                     /translation="MAGEESALQLVLTADPALCAIVRLSLLVSLTAVLLAAAIGVPAG
                     ALLALTRFRGREATIVILNALMGLPPVVVGLAIFLLLSRSGPLGSWGLLFTPRAMVIA
                     QTVLVAPIIAALTRQIIEDLWVEYRDELAAMNVGPLGRVTTLIWDARFSLVTVLLAGF
                     GRAAAEVGAIIIVGGNIEGFTRTMTTAIALETSKGDLPLAIGLGVVLMSIVVLINALA
                     WGMRRAGERYAG"
     gene            968..1690
                     /locus_tag="VIY07_10275"
     CDS             968..1690
                     /locus_tag="VIY07_10275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6382175.1"
                     /translation="MRAPASDLPLVLANASVMRRDVTILDSISLTIAPGSPTILIGPN
                     GSGKTTLLRVAMGLIPLSGGSISWGSRENASPERRAITFQRPAMLRRSACANVRYALG
                     AAAVPRGQRHNRAAELLTMVGLEALASRPARRLSGGEQQRLALARALARDPALLFLDE
                     PTASLDPYATKAIEDIVEAVSTRGVKIVMSTHDLGQAKRLAGDVVMLHRGQLIENTPA
                     TEFFTNPRTEEARKFIAGELLV"
     gene            1733..>1907
                     /locus_tag="VIY07_10280"
     CDS             1733..>1907
                     /locus_tag="VIY07_10280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter"
                     /protein_id="HEY6382176.1"
                     /translation="MVAAAAGTVIAAAAGAAAQEEKSIVVSSTTSTQDSGLFGHILPL
                     FKQKTGIDVKVVAQ"
BASE COUNT          331 a          597 c          594 g          385 t
ORIGIN      
        1 tcggctgtca aagacacacc ctttccggcg cgcaccttca tccaccagac cttattctta
       61 ggccttttcg cgagcctgtc gcaggcagac gtcggatccg caagcggcgc gcaatatatc
      121 cgcggtcggt cagctcgcaa ccgtgcgcct gcgaggcacc ctgacttcaa ttacatgttc
      181 tgataagcat aattatgtct tgttttcaaa cattgaccgt aacgggactg gatgcacaaa
      241 tgagcagata gcccaaggtt ccaagagtta cgatggctgg cgaggaatcc gctcttcaac
      301 tggtgctgac cgccgacccc gctttgtgcg caatcgtgcg cctgtcgctt cttgtcagcc
      361 tcaccgctgt attgcttgcc gcggccatcg gggtgccggc cggcgccctt ttggcgctga
      421 cgcgctttcg cggccgcgag gcgacaattg tcattctcaa cgcgctgatg ggtctgcccc
      481 ccgtcgtcgt gggactggca atatttctgc tgctgtcgcg ctccgggccg cttggatcgt
      541 ggggcctgct gttcacccct cgggcgatgg tgatcgcgca aacagtcctc gttgcgccga
      601 tcattgcggc gctcacgcgg caaatcatcg aagacctgtg ggtggaatat cgcgatgagc
      661 tcgcggccat gaatgtcgga ccgctggggc gcgtgaccac gctgatctgg gatgcgcgct
      721 tcagtctggt caccgtattg cttgcgggct ttggccgcgc agcggcggaa gtcggagcca
      781 tcatcattgt cggcggcaac atcgaaggat tcacgcgcac catgacgacc gcaatcgccc
      841 tggaaacgtc caagggagac ctgccgctgg cgatcgggct tggcgtggtg ctgatgtcaa
      901 tcgtggttct gatcaacgcg ctggcctggg gcatgcgccg cgccggcgaa cgctacgcag
      961 gatgagcatg cgcgcgcccg cctccgacct tcccctggtt cttgcaaacg cctcggtcat
     1021 gcggcgagac gtcacgatac tggattctat ctcgctgacg atcgcgccag gatcgcccac
     1081 gattttgatc gggccgaacg gcagcggaaa gacgacgctg ttgcgcgtgg cgatgggtct
     1141 tattccgctc tctggtggaa gcatcagctg gggctcccgc gagaatgcgt cccctgagcg
     1201 tcgtgcgatc acgttccagc gcccggccat gcttcggcgt tcggcctgcg caaacgtgcg
     1261 ttatgcgctc ggcgcggcgg ctgtgccacg cggacagcgg cacaatcgtg cggcagaatt
     1321 gctgaccatg gtcggccttg aggcacttgc cagccgtccg gcgaggcgtc tctcgggcgg
     1381 cgagcagcag cgcctggcgc tggcgcgcgc gctcgcgcgc gatccggcct tgcttttcct
     1441 cgatgagccg accgccagtc tcgatccata cgccaccaag gcgatcgagg acatcgtgga
     1501 ggccgtgagc acccgcggcg tcaagattgt gatgtcgacg cacgatctcg gccaggccaa
     1561 gcggctcgcc ggcgacgtgg tgatgcttca tcgcggccaa ttgatcgaaa acacaccggc
     1621 cacggaattt ttcaccaacc cgcgcacgga agaggcgcgc aaattcatcg ccggcgagtt
     1681 gctggtctaa aaaccgaaac ggaggattca catgtttacc cgtcgcttct tgatggtcgc
     1741 tgctgcagcc ggaactgtca ttgctgccgc ggcgggcgcc gccgcgcagg aagaaaagtc
     1801 catcgtggtg tcgtcgacca cgtcgaccca ggattcgggc ctgttcggcc atatcctgcc
     1861 gctgttcaag caaaagaccg gcatcgatgt gaaagtcgtg gcgcagg
//
LOCUS       DATDHO010000536         2460 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_273648, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000536 DATDHO010000000
VERSION     DATDHO010000536.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2460
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_273648"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..508
                     /locus_tag="VIY07_10285"
     CDS             <1..508
                     /locus_tag="VIY07_10285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007872155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY6382177.1"
                     /translation="DVDGREAVRILRKSGFKAPIIMLTGHDTDSDTILGLESGANDYI
                     TKPFRFAVLLARIRAQLRQHEASEDAVFIIGPYTFRPSSKMLLSPKGSKVRLTEKETA
                     ILRYLYRAGQKPVSRETLLQEVWGYNSGVTTHTLETHIYRLRQKVEKDAAAPAILVTE
                     AGGYKLVP"
     gene            549..1013
                     /locus_tag="VIY07_10290"
     CDS             549..1013
                     /locus_tag="VIY07_10290"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEY6382178.1"
                     /translation="MGLEEDIAFFERVPPLAALGKQALRILAIGAETRHLQSGAVLFY
                     AGELADGGYVVQEGSLLLEPGTLAEGNEITVGPGTLIGELALLTNTVCQATAIAKEPT
                     IVVRIPRNLFRKMLEGYPAAAEKLRDSMTERLQAWSKELASVKIDLERHGKR"
     gene            complement(1028..1846)
                     /locus_tag="VIY07_10295"
     CDS             complement(1028..1846)
                     /locus_tag="VIY07_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEY6382179.1"
                     /translation="MSLKITTWNINSVRLRIDLVARFLKSVRPDVLCLQETKCPDDIF
                     PMKRFRRLGYEHAALNGQKGYHGVAVLSRVPFEQVDIQNFCGKIDCRHISVTLGERTK
                     LKAPITLHNFYVPAGGDEPDPDINLKFRHKLDFLDEMQAHNGLRPERSTHAMLVGDLN
                     VAPLEHDVWSHKQMIRVVSHTPIECEKLVAAQKSGGWIDCMRVHTPEPEKLYTWWSYR
                     AMDNWRTADRGRRLDHVWTSDALAAHISEIRIAKDYRGAKRPSDHVPVTATIEL"
     gene            complement(1981..>2460)
                     /locus_tag="VIY07_10300"
     CDS             complement(1981..>2460)
                     /locus_tag="VIY07_10300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer-membrane lipoprotein carrier protein LolA"
                     /protein_id="HEY6382180.1"
                     /translation="QVGPDGSRTQGDFYISKPGRVRFEYDDPSPIELIADGSSVVVRD
                     RRLATQDVYPLSQTPLRFLLADRVDLAKDTHLIAVYADDVFVTVVAEEKSGIVGTSRL
                     MIMFSAKDMQLKQWTVTDPQGFDTTVAVYNLDTSKRPDPGLFKIDYTRYPNSNSNSN"
BASE COUNT          537 a          685 c          707 g          531 t
ORIGIN      
        1 ggatgtagac ggtcgcgagg cggtccgcat tttgcgcaag agtggcttca aggcgccaat
       61 catcatgttg acggggcacg acaccgattc tgacactatt ctcggcctcg aatcgggcgc
      121 gaacgattac atcaccaagc cgttccgatt tgcggtgctg cttgcgcgca tccgcgcaca
      181 actgcggcag cacgaggcga gcgaagacgc agtattcatc atcgggccct atacattcag
      241 accgagctcc aagatgctgc tgagccccaa gggcagcaaa gttcggctaa cggaaaaaga
      301 gacagcaatt ctccgttatc tttatcgggc ggggcagaaa ccggtgtcgc gcgaaacact
      361 gttgcaggaa gtatggggct ataattccgg cgtaaccacc cacacgctcg aaacccacat
      421 ttaccgtctg cggcaaaaag tcgaaaagga cgcggctgct ccggctatct tggtgacgga
      481 agccggcggt tataagctcg tcccgtgatt gacgtgcaca tcaatttggc attccgcgga
      541 taaacgggat gggcctcgaa gaagacatcg cctttttcga gcgagtgccg cccttggcgg
      601 cgctcggcaa gcaagcattg cggattctgg cgatcggcgc cgaaacgcgt catctacaaa
      661 gcggagcagt gctcttctat gccggcgaac ttgccgatgg cggatatgtt gtccaggaag
      721 gttcgctgtt gcttgaacca ggcacgctgg ccgaaggcaa cgaaatcacc gtcggtcccg
      781 gaacgctgat cggtgagctc gccttgctca ccaatacggt gtgtcaggca acggcgatcg
      841 cgaaggaacc gacaatcgtc gtgcgaatac ctcgcaactt attcagaaaa atgttggagg
      901 gttatccggc cgccgcggag aagctgcgcg acagcatgac cgaacggcta caggcctggt
      961 ccaaggagct cgcaagcgtg aaaatcgacc tggaaagaca tggaaagcgc tgatccttgc
     1021 cactcgttca gagttctatc gtggctgtta ccggaacgtg gtcggagggg cgttttgcgc
     1081 ctcgataatc tttcgcgatt ctgatttccg aaatgtgcgc agcgagtgcg tccgaggtcc
     1141 agacatgatc aagcctgcgg ccgcgatcgg ccgtacgcca gttgtccatc gcacggtagc
     1201 tccaccacgt gtaaagtttc tccggctcgg gcgtgtgcac acgcatgcaa tcgatccagc
     1261 cgcctgactt ctgcgcggca acgagcttct cgcattcgat cggcgtatgg gaaacgaccc
     1321 tgatcatttg cttgtggctc cagacgtcat gctcgagcgg cgcaacattg agatccccta
     1381 ccagcatggc atgtgtcgat ctttcaggcc gcaatccatt gtgcgcctgc atttcgtcaa
     1441 ggaagtcgag tttgtgccga aattttaggt tgatgtccgg gtcaggctcg tcgccgccag
     1501 cgggcacata aaaattgtga agcgtaatcg gagctttcag cttcgtccgc tctcccaatg
     1561 ttacggaaat atgccggcaa tcaatcttcc cgcaaaaatt ttgaatatcg acctgctcaa
     1621 atggcacgcg cgagaggacc gcaacgccgt gatacccttt ttgtccgttg agcgcagcgt
     1681 gttcatagcc caggcgcctg aaacgcttca ttgggaagat gtcgtccgga cacttcgtct
     1741 cctgcaggca gagcacgtcc ggtcgcacgc tcttgagaaa tctggcgact agatcaatac
     1801 gcaggcgcac cgaattgatg ttccatgtcg tgattttcag tgacatggct tgcaacatag
     1861 ggcttcgagc gcggactttc cattcgtcgc ggcggcggtt gaccacgcca tccacgtgtt
     1921 aattttctgg ccggcatgca cggaataaag ccgggcatga cgaacgccgc cgatattcaa
     1981 tcaattggaa ttggaattgg aattgggata gcgggtgtag tcgatcttga acaatcccgg
     2041 atcgggacgc ttgctggtgt cgagattgta caccgcgacc gtggtgtcga agccctgggg
     2101 gtcggttacc gtccattgct tgagctgcat atccttggcg ctgaacatga tcatcagcct
     2161 gctggtgccg acaattccgc tcttttcctc agcaactacc gtgacgaata catcgtcggc
     2221 atagaccgct atcagatgcg tgtccttcgc gagatcgacg cgatcggcga gcaagaatcg
     2281 caagggtgtc tgcgacaaag ggtagacatc ctgggttgcc agccggcggt cgcgcaccac
     2341 caccgacgag ccgtccgcaa tcagctcgat gggactcggg tcgtcgtact caaatcggac
     2401 tctgcctggc ttggagatgt agaaatctcc ctgggttcgg ctgccatccg gaccgacctg
//
LOCUS       DATDHO010000537         3146 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_467770, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000537 DATDHO010000000
VERSION     DATDHO010000537.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_467770"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..183
                     /locus_tag="VIY07_10305"
     CDS             <1..183
                     /locus_tag="VIY07_10305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382181.1"
                     /translation="EGKHWMYKDSPKRLDVIRMCEDCRVVAMAEEQFDPFGAPQRPPV
                     RTTEDYLREREQKGES"
     gene            complement(184..1467)
                     /locus_tag="VIY07_10310"
     CDS             complement(184..1467)
                     /locus_tag="VIY07_10310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY6382182.1"
                     /translation="MKLLCLVFALLAFAFCPAQAQLRGHGGPVRALAISPDGTHAVSG
                     SFDTSAIRWSLAANAAEQVLRFHDGAVNAVAYLKDGRIVTAGADARIAIWTPGRQQPD
                     KILDGHSAPIASVAVSPDSTMLASASWDRTVRLWPLSGGEPRVLEGNAQNANGVAFSP
                     DGKNVVSAGYDATIRIWPLKGGSEIVRNLPTPLNDVAIAPDGEIVAAGGDGKVYFLSP
                     AGDVLGEAQASPTPVIALAISPDGNLVAAAGIRGSVAVIERKTRKVGHTLVGPGLPVW
                     SAAFFPDNRTLLTGGADRMIRRWDASNGEPIGATIMGAPEDPLAAYAGDHGAEVFRAC
                     IACHTLSPDEVSKAGPTLAGIFGRRIATLPGYNFSPALKKMDIVWTPETVSKLFEVGP
                     AQYTPGTKMPEQTIGSAEDRKALVDFLAKATANSK"
     gene            complement(1513..>3146)
                     /locus_tag="VIY07_10315"
     CDS             complement(1513..>3146)
                     /locus_tag="VIY07_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032324 - molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin biosynthesis protein"
                     /protein_id="HEY6382183.1"
                     /translation="TVMPGTCTAIATGGVIPRGADAVVMIEQTELIEEGHPRIELRRA
                     ATPGQFISYAGSDIARGETLLRRGTRIGAREIGMLAACGLDRIEVVRRPRVAVISTGD
                     ELVEPGRPLRPAGVYDSNGAIIAAAVAEAGGEPLAYGSLRDDAAVLEKTVREALAASD
                     MVVLSGGTSKGAGDLSHRVVSQLGKPGILVHGVALKPGKPLCLGVVGDKPIVVLPGFP
                     TSAIFTFHAFAAPIVRARAGLPPESAETISARVPVRIASELGRKEFVLVSLIEREEGT
                     IAFPTGKSSGAVTSFSQADGFIEIDALASALNADSDAQVTLIGSSARAPDLVIMGSHD
                     VALDVVVGALIEHGLSARVLAVGSLGGVGAISRGECDVAPVHLIDPASGQYNKHLVGP
                     GMSLVPGWRRMQGILFRPGDARFEGHSAKEALKIVLEDSSALMVNRNAGAGTRVLTDK
                     LLDGASPAGYANQPKSHNAVAAAIAQGRADWGIAIDPVAKLYGLGFLPVSPEHYDFLV
                     ADSRRERPGVQAFLAALRDERVRARVRALGMEPEG"
BASE COUNT          616 a         1057 c          936 g          537 t
ORIGIN      
        1 gagggcaaac actggatgta taaagactcg ccaaaaaggc tggacgtcat ccggatgtgc
       61 gaggactgcc gcgtcgtagc gatggcagaa gagcaatttg acccgttcgg cgcaccacaa
      121 cgacccccgg tgcgcacaac cgaggactat ctgcgcgaac gggagcagaa aggcgaaagc
      181 tagctacttg ctgttcgccg tcgccttggc caggaagtcc accagcgcct tgcggtcctc
      241 ggccgatccg attgtctgct ccggcatctt ggtgcccggc gtatattgtg caggcccgac
      301 ttcaaacagt tttgacactg tctccggcgt ccagacgatg tccatcttct tcaatgccgg
      361 cgaaaaattg taaccgggca gcgtggcgat ccgccgcccg aatattccgg caagcgtcgg
      421 gccggccttg ctgacttcgt ccggtgacag cgtatggcag gcaatgcagg cgcggaacac
      481 ctcggcgccg tgatctcctg catacgcagc caagggatcc tctggcgctc ccatgatggt
      541 cgcgccgatc ggttcgccgt ttgacgcatc ccaacggcgg atcatccggt cggcaccacc
      601 ggtcaacagc gtgcggttgt cgggaaagaa ggccgcggac cagacgggca ggcccggccc
      661 gaccagcgta tgtccgacct tgcgcgtctt gcgctcgatc accgccaccg agccgcgaat
      721 gccggccgcg gcgacgagat ttccgtctgg agagatggcg agcgcgatga caggcgttgg
      781 cgaggcttgc gcttcaccaa gcacgtcgcc agccggcgat aggaaataga ctttgccgtc
      841 gcctccagcg gcgacaattt ccccatccgg cgcaattgcc acgtcattga gcggcgtcgg
      901 caaattgcgc acgatctcgc tgccgccctt gagcggccag atccgtatcg tcgcgtcgta
      961 gcccgcgctg acgacattct ttccgtccgg cgagaatgcg acgccgttgg cgttctgggc
     1021 gttgccttca aggacgcgtg gctcgccgcc actcagcggc cacagccgga cggttctatc
     1081 ccacgacgcg gaggcgagca tcgtgctgtc aggcgacacc gccacgctcg cgatcggcgc
     1141 cgaatggcca tcaagtatct tgtcgggctg ttgtcgtccc ggcgtccaga ttgcgatgcg
     1201 ggcatctgcg ccggcggtga cgatgcgtcc gtctttcaaa taggcaactg cattcacggc
     1261 gccatcgtga aagcgtaaca cctgctccgc ggcattcgct gccaatgacc accggattgc
     1321 cgaagtgtcg aagctccccg acactgcatg tgtgccatcc ggagaaattg ccagcgcgcg
     1381 caccggcccg ccatgaccgc gcaactgcgc ctgcgccgga caaaatgcga aggccagcag
     1441 cgcgaaaacc aggcagagaa gtttcattgg gtgcggcatg ggcatccaat atcctccagc
     1501 ataagcggac attcagccct cgggttccat gccgagggcg cgcacacgcg cgcgcacgcg
     1561 ctcgtcgcgc agggcggcaa gaaatgcctg cacccccggt cgttcacgcc gactgtcggc
     1621 gacaagaaaa tcataatgct ccggcgagac gggaagaaaa ccgaggccgt aaagcttggc
     1681 caccgggtcg atagcgatgc cccagtcggc gcggccctgc gcaatcgcgg ctgcaacggc
     1741 attgtgagat tttggctgat tggcataacc ggccggactc gcgccatcga gcaacttgtc
     1801 ggtaagcacg cgcgtgccgg cgccggcatt gcggttgacc atcaaggcag aggaatcctc
     1861 caggacaatc ttcagcgcct ccttcgcact gtgcccttca aaacgggcat cgccggggcg
     1921 gaacagaatt ccctgcatgc gccgccagcc cggaaccagg ctcatgcccg gtcccacgag
     1981 atgcttatta tattgtccgc tcgccggatc gatcagatga accggagcta catcgcattc
     2041 gccgcgactg atcgcgccca cgccgcccaa actgcccacg gccagaacgc gcgccgaaag
     2101 gccatgctcg atcagcgcgc cgacgaccac gtcgagcgcc acgtcgtgac tgcccatgat
     2161 caccagatcc ggcgcgcgcg ccgaactccc gatcaaagtc acttgcgcgt cgctgtcggc
     2221 gttgagagcc gaggcgagtg cgtcgatctc gataaacccg tctgcctgag aaaagcttgt
     2281 caccgccccc gaacttttgc cggtggggaa agctatggtg ccctcctcgc gctcgatcag
     2341 tgacaccaac acaaattcct tccggccgag ttctgacgcg atccgcaccg gcacgcgcgc
     2401 gcttatcgtt tccgcagatt ccggaggcag cccggcacgc gcgcggacta tgggagcggc
     2461 aaaagcatgg aacgtaaaga tcgccgaggt cggaaacccc ggcagcacca cgattggctt
     2521 gtcaccgaca acgccgaggc aaagaggttt acccggtttt agagcaacgc catgtacgag
     2581 gattcccggc ttgcccaatt gcgacaccac gcgatgcgac agatcgcccg cacctttcga
     2641 ggtgcccccg gacagcacca ccatatcgct ggcggcgagc gcctcacgca ccgtcttttc
     2701 cagcaccgcc gcgtcgtcgc gcaaggagcc gtatgcgagc ggttcaccgc ccgcctcggc
     2761 gaccgcagct gcgatgatgg cgccattgct gtcatagact cctgccggcc tgaggggcct
     2821 gcccggctcc accagctcgt cgccggtcga aatgaccgcg accctgggcc gccgcacgac
     2881 ttcgattcta tcgagaccac atgccgccaa catgccgatt tcgcgcgcac cgatgcgcgt
     2941 gccacgccgc agcaatgtct cgccacgcgc aatatccgag ccggcataag aaatgaattg
     3001 cccgggcgtc gccgcgcggc gcagttcaat acgtgggtga ccttcctcga tcaactcggt
     3061 ctgttcaatc atcaccactg catcggcacc gcgcggaatg acgccgccgg tcgcaatcgc
     3121 agtgcatgtg cctggcatga ccgtca
//
LOCUS       DATDHO010000538         5798 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_322870, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000538 DATDHO010000000
VERSION     DATDHO010000538.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5798)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5798)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5798
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_322870"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            291..572
                     /locus_tag="VIY07_10320"
     CDS             291..572
                     /locus_tag="VIY07_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018407264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HEY6382184.1"
                     /translation="MPLQKFIIERDIPKVGTFEREQLRGAASKSNEVLRQLGSDIQWV
                     ESYVADNKTFCVYLARDEAIIREHAKISGFPATKITAVNKMIDPTTENS"
     gene            complement(645..1091)
                     /locus_tag="VIY07_10325"
     CDS             complement(645..1091)
                     /locus_tag="VIY07_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEY6382185.1"
                     /translation="MYRHILIPTDGSELAEHGVTNGLSLAKSVGAKVTVIVVEEPFNW
                     LSVSETQAQRAFEELAKHTEQIKKHAASVLNRVANAAKQAGVPCDTIQVENAQPYQAI
                     IATAQDRGCDLIVMASHGRSGLSAVVLGSVTNKVLTHTKTPVLVCH"
     gene            complement(1107..1367)
                     /locus_tag="VIY07_10330"
     CDS             complement(1107..1367)
                     /locus_tag="VIY07_10330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382186.1"
                     /translation="MNKALAITLMAAALAPVDVGAQMIGQTNSGQAVGTIVPSNETEK
                     LTGKERLSDKWKDDQRVDNCRVPLDKRGTTVRPDSCDRLPKD"
     gene            complement(1884..3533)
                     /locus_tag="VIY07_10335"
     CDS             complement(1884..3533)
                     /locus_tag="VIY07_10335"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEY6382187.1"
                     /translation="MRTIAPSDSKLKRMASVAVIALVAAIFSVAIAEARPGGGFGGGG
                     GMRSFGGGGGGGMRSFSGGGMRSFSGGGMRSFSGGGMRSFSGGGARFSGLGMRSSRFS
                     GLRSFSGSKFGKSAMLRSGSGVRSFSGLKSASGVKSARSLTGNSARNLGKMANLSGNS
                     GINSARGISSLKGNMVTGSVAGSRKAAMLKNSAFASAGNWKNGAKLSHAAFRGKFANQ
                     RFANQNWNHNWHGWKGWNNWHGGWWWKRPIIVIGWFGGLFWPFAYWDFVDYTFWPYAY
                     DAFWPYAYDDLYVGMFGPYAYEGPAYTNRVRSTRYARRNGHPSPTVPVVCSAKATALT
                     DWPIQQITELVQPDQAQQAALNELKDATAKAVDTLQSACPEDLPSTPTGRLAAMDKRI
                     ATMLLALSIVEPPMKRFYDSLSDEQKARFNTVNTGAQASSSRGGNRLADLSQKCGEEM
                     MKTTIMPTERIVRAVNPTEPQRNALNELNEAANKAAEFLKANCSTAEPMTPTSRVVAM
                     EQRLQTMSKAIRIVEPALQNFYGLLTDEQKARFNQLGSTGS"
     gene            complement(3828..4028)
                     /locus_tag="VIY07_10340"
     CDS             complement(3828..4028)
                     /locus_tag="VIY07_10340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382188.1"
                     /translation="MSIIGTKKLHPRAERLSPIAERSSNTPYLLLWATGVVAFVLCAV
                     AFVLWGIAGTPILFDAIVALCS"
     gene            complement(4025..5302)
                     /locus_tag="VIY07_10345"
     CDS             complement(4025..5302)
                     /locus_tag="VIY07_10345"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6382189.1"
                     /translation="MSVHSSEAAAEPQERSFWIAVICGALILTIGIGARQSFGIFQKP
                     IAADLNVGRELWSFANALALLLMGAISPFVGNIADRFGTARTVAAGGVLYAIGMFMIA
                     FATEGVVLTLGNVLCGVGMAAAGFGPIFGSITRQTPPQKRSIALGVATAGGSFGQFAI
                     VPFASLLQHQLDNWHTTMSILGVMSMVMVPLAFGLRERRVEAARLGTARQQGAKDALH
                     EAFQTYGFWLLTIGFFVCGFHVAFIGLHFPSYISDKAVGMSFFGTPISALELGGWAIG
                     LVGLFNIAGSLIWGWLGNQYPKKDMLALLYALRALAFVVFLALPLSWISVLLFSASLG
                     FLWLGTVPLTSGLVGYMFGASHMSMLWGVVFCSHQLGSFLGGWGAGRLYDIQGNYDLM
                     WWISVGLGVFAAVIHWWIREQPVPRLAMSAAPA"
     gene            5430..>5798
                     /locus_tag="VIY07_10350"
     CDS             5430..>5798
                     /locus_tag="VIY07_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY6382190.1"
                     /translation="MQKEPPTLDRATVCNCLALRQAARHISQVYDSYLASEGLRTTQY
                     SILAKLNRLGPLSINELAKSMVMDRTTLGRAIRPLERDRLLTVGEGEDGRTRSLRLTA
                     TGEARLKAATAKWREAQKNFE"
BASE COUNT         1272 a         1737 c         1640 g         1149 t
ORIGIN      
        1 atccgcgtat acgacagtgc ggcggtcaac acaggctact acactttgtc tttcgtcaag
       61 gatggagaga ccaaaactgt gcctgcgcgc tacagcttta cgtacgtgaa gcgcggcaac
      121 gactggctca ttgtggacca ccattcctcg accgtgccct cggcgccgaa ataactttcc
      181 aggcaccacg ctgcgtcgac aataagcctg acggaaattt ccaaacgccc cgatgagtgt
      241 gctaagccgg gacactcgac agggtgtggc atagtgattg gaggaaagta atgcctttgc
      301 aaaagttcat catcgagcgg gatattccaa aagtgggcac atttgaacgc gaacagctac
      361 ggggagcggc atcgaaatcg aacgaagtct tgcgtcaact cggctccgat attcagtggg
      421 ttgagagtta cgtcgccgac aacaagacgt tctgcgtcta tctcgccagg gatgaggcga
      481 ttatccgcga acacgccaag atcagcggat ttccggcgac gaagattacg gcggtgaaca
      541 agatgatcga tcctaccacc gaaaactcgt aacgactgag aaccgcgaac gtttggttgc
      601 tatccggaaa tgtccgctgg ctgggccgcc agccgccggc gaattcagtg acacaccaac
      661 actggagtct tcgtgtgcgt cagcaccttg tttgtaacac ttccgagcac gactgcggat
      721 agtccgctgc gtccgtgcga cgccatgacg ataagatcgc acccccgatc ctgggctgtt
      781 gcaatgatgg cttgataggg ttgcgcgttc tccacctgaa tcgtatcgca gggcacaccg
      841 gcctgtttgg ccgcattggc cacccggttc agcacgctcg cagcgtgctt cttgatctgc
      901 tcggtatgtt tggcgagttc ctcaaaagcg cgctgcgctt gcgtttctga aacgctgagc
      961 cagttgaacg gttcctcgac gacaatcacg gttaccttgg ctcccacgga tttcgccagc
     1021 gacaatccat tcgtcacccc atgctccgcc aactccgacc cgtccgtcgg aatgagaata
     1081 tgccggtaca tgctccacct ctctgttcaa tcctttggca ggcgatcgca gctatcgggc
     1141 cgcaccgtag tgccgcgctt gtcgagcggg accctgcaat tatctacacg ctggtcgtct
     1201 ttccatttgt cactgaggcg ttccttgcca gtgagttttt cggtttcatt cgacggcaca
     1261 attgtgccca cggcctgacc ggagttggtc tggccaatca tttgggcacc gacatcgacg
     1321 ggagccagcg cggcggccat caaggtgatt gcgagtgcct tattcaacgc cgacctgctg
     1381 gtctttatga aagttagctc gcaccattct gacccacacc gacggactga tcgaatagtc
     1441 ggaaatgaat ggccgatttt tggaccaaag cggtcattca ttttgcagcg cgaatgtccg
     1501 ctttcggaga aaacctgaca ctgccggaca tggtaattcg aaaccccttc agtgatccgg
     1561 tttgacccgg taccatactc tgtcttgagc ctcggggggc ggcaatgagg cggcgcgaat
     1621 tcgtcacgct tgttggcagt gctgctgtct ggccgtcggc ccgcgccgat gatgtaatcg
     1681 aataaatctg gtgacgtccg gctattggcc catagcggac ataccgctcg cagctacgaa
     1741 tgccggcttt ggaagtaaag caaacagcac aattggcggc tggcccgcca tttcaaagcg
     1801 ggggtcagct accagcctgt cgccgtaagg ctaagccgca gcaatagatc cacactggct
     1861 gcgctcagca cgtgcggaca aacttaactc cccgttgaac cgagttgatt gaagcgtgct
     1921 ttttgctcgt cggtcagtaa cccgtagaaa ttctgcagcg ccggttccac gattctgatg
     1981 gctttcgaca tggtttggag ccgttgctcc atcgccacaa cgcggctggt tggcgtcatc
     2041 ggctctgccg ttgagcaatt tgccttgagg aattcagcgg ctttgttggc ggcttcgttc
     2101 agctcattga gcgcgttgcg ctgaggctcg gttggattga ctgctcgcac gatccgctcg
     2161 gtcggcatga tcgtcgtttt catcatttcc tctccgcatt tctgcgagag atcggcaagc
     2221 cggttgccac cgcgagaact cgaggcttga gcccccgtgt tgacagtatt gaaacgcgct
     2281 ttctgttcat cgcttaagga atcatagaag cgcttcatgg gcggctccac aatgctgagc
     2341 gccagcaaca tcgttgcgat gcgcttatcc atcgcggcga gccgtcctgt cggggtactc
     2401 ggcaagtctt ccgggcacgc cgactgcagc gtgtccaccg cttttgcagt ggcgtccttc
     2461 agctcgttaa gcgcagcctg ttgagcctga tcaggctgta ccaactcggt aatctgctgg
     2521 attggccaat cggtcagcgc cgttgccttt gcgctgcaaa caaccgggac agtcggagac
     2581 gggtgtccat ttctccgcgc gtatcgggtg cttcgtactc gatttgtgta ggccggccct
     2641 tcgtaggcgt acggcccgaa catgcctacg tagagatcgt cataggcgta gggccagaac
     2701 gcatcgtagg cgtaaggcca gaaggtgtag tcgacgaaat cccaataggc gaacggccag
     2761 aataatcccc cgaaccaacc gatgacaatg atcgggcgtt tccaccacca tccgccgtgc
     2821 cagttgttcc agcctttcca gccgtgccaa ttatgattcc agttctggtt cgcaaacctc
     2881 tggtttgcaa attttccgcg gaaggccgcg tgcgatagct ttgcgccgtt tttccagttg
     2941 ccggccgaag cgaaggcgct gtttttcagc atcgcggctt tgcgggaacc ggccaccgag
     3001 ccggtgacca tgttgccttt gagagacgag atgccgcgag cactgtttat tccggagttg
     3061 cctgagaggt tggccatctt gccgagattt cgcgcgctgt tccctgtcaa tgaacgcgcc
     3121 gacttgacac ctgaagccga cttaagaccc gaaaatgagc gcacgccgga cccggagcgg
     3181 agcattgccg atttgccgaa cttgctgccg ctgaatgagc ggaggcctga aaatctgctg
     3241 ctgcgcatgc cgaggccgct aaaacgggca ccgccaccgc tgaagctgcg catgccgcca
     3301 ccgctgaagc tgcgcatgcc cccaccgctg aagctacgca tgccgccacc gctgaagcta
     3361 cgcatgccgc caccgccacc accgccgaag ctgcgcatgc cgccgccccc tccgaaacca
     3421 ccgccgggac gggcttcggc gatagctacc gaaaaaatcg ccgccacaag ggcaatcaca
     3481 gcaaccgacg ccatccgttt cagttttgaa tccgaaggag caatggtgcg cacagcgggc
     3541 actcctttac tgaggccatc acggaatttt aactggcgca gtcacctttc ggcgcgctgc
     3601 gccgccgtac taagactaat ccaaaaaata gcggcgtgaa aaaaaataac agcacgaaaa
     3661 aagatgtgtc ctttgacgta gcttaatgcc cgaggttccc cgagcattgc gccagaggcc
     3721 gagtatctta cttgcctcct ccgaaatcgg tcctacgggc cgaagttccg cgttgggtca
     3781 gaagcggaac atgctgctgc accgcgaaga agcaggcgtg cggttcgcta actgcacagc
     3841 gcgacgatcg catcgaacag gatgggggta ccagcgatgc cccaaaggac gaacgcgacg
     3901 gcgcagagca caaaggcgac aacgcccgtt gcccacagaa gcaaataagg agtgttggac
     3961 gaccgttcgg ctatggggct caaccgctcg gcgcgggggt gcagtttttt cgtgccaatg
     4021 atgctcatgc cggtgctgcc gacatcgcca ggcgcggcac cggctgctcg cgaatccacc
     4081 agtgaattac ggccgcgaat acaccgagtc cgactgagat ccaccacatc agatcgtagt
     4141 tgccctgaat gtcgtagagc cggcccgcac cccagccgcc caggaaactg ccgagctggt
     4201 ggctacaaaa cacgacgccc cacagcatcg acatgtgcga tgcgccgaac atgtaaccga
     4261 cgagcccgct cgtgagcgga accgtgccaa gccagaggaa cccgagcgaa gccgagaaca
     4321 gcagcactga gatccatgat agcggcaaag cgagaaagac aacgaaagcc aacgcgcgca
     4381 aggcgtagag caatgccagc atgtcctttt taggatactg gtttccgagc cagccccaga
     4441 tcaaagagcc ggcgatgttg aacaagccga cgagcccgat ggcccagcct cccagttcga
     4501 gggcggaaat cggcgtgcca aagaacgaca tgccgacggc cttgtcggaa atgtacgagg
     4561 ggaaatgcaa tccgatgaat gccacatgga aaccgcacac gaagaacccg atggtaagca
     4621 gccagaagcc gtacgtctgg aaggcctcat gcagtgcatc ttttgcacct tgctgccttg
     4681 ccgtccccaa tcttgctgcc tcgacgcggc gttcccgcag cccaaaggca agcggcacca
     4741 tcaccatcga catcacgcca agtatggaca tggtcgtatg ccagttatcc agttgatgct
     4801 gcagcagcga cgcgaacggc acgatagcga actgaccaaa cgatccgccg gccgtcgcga
     4861 caccaagcgc aattgaacgt ttctgcggcg gggtctgccg ggtaatggac ccgaagatcg
     4921 gaccgaaccc tgccgccgcc atgcccacgc cgcacaacac gtttccgagg gtgagcacga
     4981 cgccttcggt cgcaaacgcg atcatgaaca tgccgatagc gtaaaggaca ccgccggcgg
     5041 cgaccgttcg tgccgtgcca aaacgatccg cgatgttgcc gacgaacggc gaaatcgcgc
     5101 ccatcaacag caacgccagc gcattggcaa acgaccacag ctcgcgccca acgttgaggt
     5161 cggctgcaat tggcttctga aagataccga aactttggcg tgccccgatc ccgatcgtga
     5221 ggatcagagc cccgcagatt acggcaatcc agaagctccg ttcttgcggc tcggcggcgg
     5281 cctcggagga gtgcactgac attgggcgtc tctgcgagca gttcttaaat aggcgcatat
     5341 gcacctttct cttgactgta atacgcgcat atgcacctat tggcaagggg agtcgcaacg
     5401 attggctccc tgtttaagga atgcgagcta tgcagaaaga accgccgacc ctcgaccgcg
     5461 ccaccgtctg taattgcctg gctcttcgcc aggccgcacg ccatatcagc caggtctacg
     5521 atagttacct ggcgtcggaa ggcctgcgga ccacgcagta ttcgatattg gcgaagctca
     5581 atcggctcgg accgctctcg atcaatgaac tggcgaaatc gatggtcatg gatcgcacga
     5641 cccttggccg cgccatccgt cctctggaac gcgacaggtt gctgacggtc ggagagggcg
     5701 aggacggccg cacccgcagc ctgcggctca cggccacagg cgaggcgcgg ctgaaggctg
     5761 cgacggcgaa atggcgcgag gcgcagaaga actttgaa
//
LOCUS       DATDHO010000539         1920 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_174376, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000539 DATDHO010000000
VERSION     DATDHO010000539.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1920
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174376"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..301)
                     /locus_tag="VIY07_10355"
     CDS             complement(<1..301)
                     /locus_tag="VIY07_10355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382191.1"
                     /translation="MQITATRIGSIAEHSTLKALLALPIRASMFALGGHHGRCAIYGA
                     ATSVGVRKRLRFVSPHGYMKGKEKFGFRIWCRDPDVGRAELSALAYRRTDKPAYRR"
     gene            370..567
                     /locus_tag="VIY07_10360"
     CDS             370..567
                     /locus_tag="VIY07_10360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382192.1"
                     /translation="MSTPTEWNLLKHQFDALVHDEIVGADSIEKTFDEQVRRRFAEMI
                     NRAAERGSGTVGRFPRWRKDL"
     gene            570..791
                     /locus_tag="VIY07_10365"
     CDS             570..791
                     /locus_tag="VIY07_10365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382193.1"
                     /translation="MNQRDQELLDKQLWGIGADRPGHGSALGLAFVAVFLGGLSLGAI
                     LFAPENTQMQMTSRGATTVLSFLDSSPQR"
     gene            complement(919..1329)
                     /locus_tag="VIY07_10370"
     CDS             complement(919..1329)
                     /locus_tag="VIY07_10370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007528007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY6382194.1"
                     /translation="MTTRRAACSCGQLHLTIEGEPARISMCHCLECQRRTGAVISNQA
                     RFRREQVTFAGEARAWARKAESGNTLTFHFCPVCGSTVYWEGEGFPGSVAVAIGGFAD
                     PNFPAPTIAVWEEARHPWVSLPPDTPPKRVPKQG"
     gene            complement(1550..>1920)
                     /locus_tag="VIY07_10375"
     CDS             complement(1550..>1920)
                     /locus_tag="VIY07_10375"
                     /inference="COORDINATES: protein motif:HMM:NF012464.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEY6382195.1"
                     /translation="LVKRGVRVLTANGDDLTGSADPSRKMMRQIAGAFSEYEKARLVA
                     KLRAARERKRAATGKCEGRKSHAELNPELVREARLRRRLPKGGQRSLRDVSAELARLG
                     HLNATGRAFSASSIKSMIEN"
BASE COUNT          413 a          536 c          570 g          401 t
ORIGIN      
        1 gccgacgata ggccggtttg tccgtcctgc ggtaagccaa tgcacttaat tcggcgcggc
       61 ccacatccgg atcacggcac caaatacgaa atccaaattt ttctttgccc ttcatgtaac
      121 cgtgaggaga cacgaagcgc agacgtttcc ggacacccac actcgtagca gcgccataga
      181 tggcacaacg gccgtgatgt ccacccaaag cgaacatgga cgcccggatc ggcagtgcaa
      241 gtaatgcttt gagggttgag tgttccgcaa tggaaccaat gcgcgtagca gtaatttgca
      301 taactcgaag atgaacgccc gttcactctg ttcgttatca aacacgtacg tcaggtggag
      361 acgagaaagg tgtcgacgcc cactgaatgg aacttgctga aacaccagtt tgatgcgctg
      421 gtgcatgatg aaattgtggg cgctgacagc attgaaaaaa cctttgatga acaggtccgt
      481 cgccgtttcg ctgaaatgat aaaccgagct gcggagcgcg gaagcgggac ggttggccgg
      541 ttcccgcgat ggcgaaaaga tttgtaaaga tgaaccagcg tgaccaggaa ctcttagaca
      601 agcaactgtg gggaattggt gcggaccgcc caggacacgg cagtgcattg ggcttggcat
      661 ttgttgcagt atttttaggc ggcctttccc ttggcgcgat cctgtttgcg cccgaaaaca
      721 cgcagatgca gatgacctcg cgtggcgcga cgactgtact ttcctttctc gacagctcgc
      781 cgcaacggta ggcgccctta ttgactgcaa tgtccgccat tggcccatag cagacatggt
      841 ctattgcacc gcacgtgtcc gctttcgggg cgcaaagcgg acacgcttat gacggccctg
      901 aagaagctcg ttgttttgtc atccctgctt cggcacgcgc tttggcggcg tgtcgggcgg
      961 caaggagacc caggggtggc gtgcctcctc ccacaccgcg atggtcggcg cggggaaatt
     1021 cgggtcggcg aagccgccga tagccacggc gacagaccca ggaaagcctt cgccttccca
     1081 gtagactgtt gaaccgcaca ccggacagaa atgaaaggtc aatgtgttgc cgctttcggc
     1141 tttgcgggcc cacgctctag cttcaccggc gaaggtgacc tgttcgcggc ggaagcgcgc
     1201 ttggttgctg atcacagcgc cggtgcgacg ctggcactcg aggcagtggc acatggatat
     1261 gcgcgctggt tcgccctcga tcgtaagatg aagctggccg cagctgcagg cggcgcgtcg
     1321 ggtggtcatg gattggctcc cgtgactgtc gatacggcgg agtgtaggcc ggacttaaaa
     1381 actatgcagg cggccaaaaa attttaaagc gaagcaggct ggcataaata aaaaactgga
     1441 ggccgtaccg gtatctattc acttgcattg acgaattttt atccaaaggc ttaaagggtc
     1501 caatagtgaa gcctcccctg gggtcgagtt attcggcaac cgcacgcgat tagttttcaa
     1561 tcatcgattt gattgacgat gccgagaaag cgcgacccgt ggcgtttaga tggcccaagc
     1621 gcgccagctc cgccgagaca tcgcgcaatg aacgctgtcc gcccttgggt aatcggcggc
     1681 gcaagcgcgc ttcacgcaca agctcggggt tcaactcggc gtggctcttg cggccctcgc
     1741 attttccagt tgccgcgcgt ttgcgctccc gagcagcgcg cagctttgca acgagccgcg
     1801 ccttttcata ttcgctaaaa gctccagcga tctggcgcat catcttgcgc gacggatcgg
     1861 cgctgcccgt aaggtcgtcg ccattggccg tgagtacgcg cacgccgcgc ttgaccaggg
//
LOCUS       DATDHO010000540         2875 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_125494, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000540 DATDHO010000000
VERSION     DATDHO010000540.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2875)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_125494"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /locus_tag="VIY07_10380"
     CDS             complement(<1..707)
                     /locus_tag="VIY07_10380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382196.1"
                     /translation="MNATRQEEAPARREIEELLPWHAAGTLSRRDAQRVEEALARDPE
                     LARRYALVREELAETIHLNESLGAPSPRAMEKLFAAIDAEPARRQATSLNFGTRISEF
                     FASLSPRTLAWSAGAAVVAILLQAGLLTGIMLNETKTSGYQTASAPTTDRGGGAFTLI
                     RFALQASSDDITKFLEANKLSIAAGPMADGLYKVRVAVTGIPKGWRIPDRRSVATVVR
                     SLEGDRLVASAQPNYLFA"
     gene            complement(704..1265)
                     /locus_tag="VIY07_10385"
                     /pseudo
     CDS             complement(704..1265)
                     /locus_tag="VIY07_10385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843228.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
     gene            1558..1797
                     /locus_tag="VIY07_10390"
     CDS             1558..1797
                     /locus_tag="VIY07_10390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382197.1"
                     /translation="MFRKLALTLGATIAIGAAALIPTSASAHMHGHHGHGHWRGGFAV
                     GIIAPTTVIASECYVVKKVVYTPFGPRVRRITVCN"
     gene            1905..2873
                     /locus_tag="VIY07_10395"
     CDS             1905..2873
                     /locus_tag="VIY07_10395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007559141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6382198.1"
                     /translation="MLAEETWMPGTRAAHDSKTGPRPDMLLEGFRRSEIKTSGARIVT
                     VTGGKGPPVLLMHGNPFNHLNWHKVAPTLAREFTVVATDLRGYGDSEKPPGGEDHSGY
                     SFRAMAQDQIEVMASLGFDRFYAAGHDRGARVLHRMCLDHPEKVLRAAILDIIPQHHL
                     YNHINQQWATFSWHWFFNIQPYDLPERMMGADPDWFIEKKLAKTRQGLSFFDPEALAE
                     YKRCFRNPATIHAICEDYRAAAGIDLEMDAKDFEAGRKITCPVLLLWGATGGVGRHSR
                     PGPAEIWKAYASNIVDAKTVPSGHYLSDEAPTETTAALRGFFTAKL"
BASE COUNT          570 a          909 c          830 g          566 t
ORIGIN      
        1 gcaaagaggt agttcggttg tgccgaggcg acgagccgat cgccttcgag ggaacgcaca
       61 acggtggcca ccgaacgacg atccggaatg cgccagccct ttggaattcc tgtcaccgcc
      121 acgcggacct tgtagaggcc gtcggccatc ggcccggcgg cgatcgaaag cttgttggct
      181 tcgaggaatt tggtgatgtc gtcggacgaa gcctgtagcg cgaatcggat caaggtgaat
      241 gcaccgcccc cacggtcggt ggtcggagct gaggccgtct gatagccgga cgttttcgtt
      301 tcattcagca tgatcccggt gagcaatccc gcctgcaaca ggattgcaac cacagcggcg
      361 cccgccgacc aggccagcgt gcgcggcgac agactggcaa agaattcgga gatgcgagtg
      421 ccgaaattca gcgacgtcgc ctgccggcga gcgggctcag cgtcgatcgc ggcaaacagc
      481 ttttccatcg cgcgcgggga cggcgcgccg agcgactcat taagatgaat ggtctcggcg
      541 agctcctcgc gcaccagtgc gtaacgacgg gcgagctcgg gatctcgcgc cagcgcctcc
      601 tcgacacgct gggcatcgcg gcggctcaac gttccagccg catgccacgg caggagttct
      661 tcgatttccc ggcgcgccgg cgcttcttct tgtctcgtcg cattcatggc caacctcgat
      721 cgagtccttg ctccctcagg agctccgaaa gtttcttacg cgcgtagaac atccgcgtct
      781 tcacagttgc ctccggaatg ccgacgatct cggccacttc ctccaccgac ttctcgtggt
      841 agtacacgag atcgattatt tcccggtggt ccgccgagag tttggtcagg cattgccgca
      901 agagcgaccc ctttttcatt cttcgccaga gtggtttcgg gatcgtcagc gtgatcctcg
      961 attcgctctg ccgtttcgtc atcgagctcg tcctccgacc ggcgtcgcag tgccgatagc
     1021 gccttgaacc gcgcaatact caacatccac gtcgaggcgg cagaccggcc ctcgaacttt
     1081 ccggcctgtc gccagatgtc gagaaacacc tcgctgatca agtcttccgc cgtcgcttcg
     1141 ttacgcacca gtctgagcac gaaccgatac acacgaacat ggtgccgcgc gtacagcacc
     1201 tgcatggcga gccggtcgcc acctgcgatt cgcaagatca gaacttcgtc cgaagtcgtt
     1261 tgcatcgcag aacaatcggc tcgtgcgtta gtcgcttccg agggcgcaga ggttcaatgc
     1321 cagatgagcg aagtctgaac gacccgcctg cctccaaacg gcggcagttt cgtcttttcc
     1381 gacgcatatc agcaagcaaa agccggcgaa acgggcaaat tgccgttaac taacgcggga
     1441 aaaggctcgc tttcggatac ctggaaaatg tcggcggtcc ccgctttgaa cctttcgccg
     1501 gacggcggcg acccatgctc aggacgcaca tcccgtgccc ccacaggaga acccgccatg
     1561 ttccgcaagc tcgccctcac cctcggcgcc accattgcga tcggcgctgc cgctctgatc
     1621 ccgacctccg cttccgcgca catgcacggc catcatggcc acggtcactg gcgcggcggt
     1681 ttcgctgtcg gcattattgc gccgacaacg gtcattgcgt cggagtgcta tgtcgtgaag
     1741 aaagtcgtct acacgccgtt tggtccacgc gttcgccgca ttacagtttg caactgacaa
     1801 cagccgatgg acagaaaccc agccccggct tcggcagcga agccggggct ttcctttcgg
     1861 ctcgattggc attcgctcgc tcttgccgtg ctcgggaatt tgttatgctg gcagaagaga
     1921 cgtggatgcc cggcacaagg gcggctcacg acagcaaaac agggccacgt ccggacatgc
     1981 tgctcgaagg cttcaggaga tccgagatca agaccagtgg cgctcgtatc gtcaccgtga
     2041 ccggtggcaa gggaccgccg gtcctgctga tgcacggtaa ccctttcaat catttgaact
     2101 ggcacaaggt cgcgccaacg ctggcccgcg agtttaccgt tgtggcgact gatttgcgcg
     2161 gctacggcga ttccgaaaag ccgcccggtg gcgaggacca ttccggctat tcattccgcg
     2221 cgatggcgca ggaccagatc gaggtgatgg cgtcacttgg cttcgaccgg ttctacgccg
     2281 ccggccacga ccgtggcgcg cgcgttctgc atcgaatgtg cctggatcat ccggaaaagg
     2341 tcctgcgcgc ggcaatcctc gacattattc cgcagcacca tctctacaat catatcaacc
     2401 agcagtgggc cacgttctcc tggcattggt tctttaatat ccagccatac gatttgccag
     2461 aacgaatgat gggcgccgat cccgactggt tcatcgagaa gaaacttgca aaaaccaggc
     2521 aggggttgag ctttttcgat cccgaggcat tggcggaata caaacgatgt ttccgcaatc
     2581 ccgcaaccat ccacgcgatc tgcgaggact atcgcgcagc agccggtatc gatctcgaga
     2641 tggacgccaa agacttcgaa gcggggcgga agatcacgtg tcccgttctt ttgctatggg
     2701 gcgcgaccgg cggcgtgggc agacacagca ggcccggccc agccgaaata tggaaggcct
     2761 acgcctcgaa catcgtcgat gcgaaaaccg tgccttccgg ccattatcta tccgacgaag
     2821 cgccgactga aaccaccgcc gccttgcgcg ggtttttcac cgcgaagtta taggc
//
LOCUS       DATDHO010000541         2356 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_174501, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000541 DATDHO010000000
VERSION     DATDHO010000541.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2356)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2356)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174501"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(206..1090)
                     /locus_tag="VIY07_10400"
     CDS             complement(206..1090)
                     /locus_tag="VIY07_10400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6382199.1"
                     /translation="MQNGASSVFISAPDGLKLHVRSYGRRSAEATPVVCLPGLARTAA
                     DFEPLASALSHDPGSRRIIALDYRGRGLSSYDRNPANYSLPVELADVIAVVTALDAVP
                     AIFVGTSRGGLLSMLLAAVRPTAIAGVVLNDIGPVIEPQGLMRIKSYVGKLPQPRTFD
                     EGAEILRRLFGAQFPRLGPDDWLANAHRTFKEQNGRLVTTYDVKLATTMNGVDGGRPV
                     PTLWKEFDALSAKPLMVIRGANSDLLTAATVEAMRARRATLETLEVPDQGHAPLLTDA
                     DTIARIAEFVARCDRSVH"
     gene            complement(1420..>2356)
                     /locus_tag="VIY07_10405"
     CDS             complement(1420..>2356)
                     /locus_tag="VIY07_10405"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY6382200.1"
                     /translation="ALGRGGYWQGRAAEAMGQNAQAKAFYEAAAQHTATYYGQLARAR
                     LGLKELGLRGPPEFTPQERKALDNLEIVRAAEILYALGERDMLASIYAELGESGSDIA
                     GMAMMGELAAKNNDGRAMLLMGQYAYARGLPLEYYAFPTIGLPDYQPIAPPVEHAVTY
                     SIARQESHFNQKVVSSAHAMGLMQVTPAAGIDTAAKFKVNYNRERLLKDPVYNMQMGA
                     AELSNLFMGYNGSYILTFAGYNAGRGRVKQWIAAYGDPRDPNVDPVDWVERIPISETR
                     NYVARIMENLQVYRARFGGGSKLVIEADIRRGAAR"
BASE COUNT          441 a          722 c          745 g          448 t
ORIGIN      
        1 aattgcaaaa ccccggcgga aaaccgtcgg ggtttttgta tttcaaaact cattattgcg
       61 gtcccatagt tttccgttcg tccccgcgaa agcggggacc cagtcggcat ttccactagg
      121 tgctggattc ccgcttacgc gggaatgaac ggatctttgg gcgcatttgc cgaattaaac
      181 gactgaaatc gccggcgggt ttgttctagt gcaccgaccg atcacaccgg gcaacaaact
      241 ccgcaatgcg cgcgatcgta tccgcgtccg tgagaagcgg cgcatggccc tggtcgggca
      301 cttcgagcgt ttcgagcgtt gcgcggcgtg cgcgcatggc ctcgacggtc gcagccgtca
      361 gaaggtcgga gttggcaccg cgaatgacca tgaggggctt cgcgcttaac gcgtcgaatt
      421 ccttccacag cgtcggtacc ggccgcccgc catcgacgcc gttcatcgtc gtggcgagct
      481 tgacgtcgta agtcgtcacc aggcggccgt tctgctcctt gaacgtgcga tgcgcgttgg
      541 caagccagtc gtcgggtccg agcctgggga attgcgcgcc aaacaggcgt cgcaggatct
      601 cggcgccctc gtcgaacgtt cgcggctgcg gcagcttgcc gacatagctc ttgatgcgca
      661 tcaggccctg cggctcgatc accggaccaa tgtcattcag aacgacgccg gcgatcgcgg
      721 tcggacggac tgcggcgagc aacattgata gaagtccgcc gcgcgaggtg ccgacgaaaa
      781 tcgccggtac tgcatcgagt gccgttacga cggcgatgac gtcggcaagt tcgaccggca
      841 gcgaatagtt cgccgggttg cggtcatagc tggacagccc gcgcccgcga taatcgagag
      901 caatgatccg acgagatccg gggtcatgcg aaagcgcgga agcaagcggc tcgaaatcgg
      961 ctgcagtgcg tgcaaggccg ggcaggcaga cgacaggcgt cgcctctgcg ctgcgccggc
     1021 cgtagctgcg gacatgcagc ttgagcccgt cgggggcgct gatgaagacg gaggaggcac
     1081 cgttctgcat ggcggaggtt gtagcatacc tccggatcgt ggagggcgcg atgccgtact
     1141 gcccacaacc tcctctcagc ctagtgatgg atgggctcta cacattcgcg gccaggccgt
     1201 catgccggct ttatgccggg catccacgtc ttcccttcag catgtcgaca agcaagatat
     1261 ggatggcacc ggaagtcggg cctgcccgac ttccgcataa aacgagccac aagtcggata
     1321 catccgactt gtggtgacaa gcccggccat gacgacgtag tcgaaatgca cggcattcaa
     1381 cgcgcatgac tgatgattgt gattgtagga gaccgaaaac tatcgcgcag cgccgcgcct
     1441 gatgtcggcc tcgatcacaa gcttgctacc gccgccgaag cgcgcgcggt agacctgcag
     1501 gttctccatg atgcgcgcga catagttgcg cgtctccgag atcggaattc gctcgaccca
     1561 gtccaccgga tcgacattgg gatcgcgcgg atcgccatag gcggcgatcc actgcttcac
     1621 gcgcccgcgc ccggcgttgt agccggcgaa ggtgagaatg taggagccgt tatagcccat
     1681 gaacaaattc gacagttcgg ccgcgcccat ctgcatgttg taaaccggat ccttcagcag
     1741 gcgttcgcgg ttgtagttca ccttgaactt ggcggcggtg tcgatgccgg cggccggcgt
     1801 gacctgcatc agccccatag cgtgcgcgct cgacacgacc ttctggttga aatggctttc
     1861 ctggcgcgca atcgaatacg tgaccgcatg ctcgaccggg ggcgcgatcg gttgatagtc
     1921 gggcaaacca atcgtcggaa aagcgtagta ctcgagcgga aggccgcgcg cgtatgcgta
     1981 ctggcccatc agcaacattg cgcggccgtc gttgttcttg gcggccagtt cgcccatcat
     2041 ggccatgccg gctatgtcgc ttccgctctc gccaagctcg gcatagatgg aggccagcat
     2101 gtcgcgctcg ccaagcgcat agagaatttc cgctgcgcgc acgatttcga gattgtcgag
     2161 ggcctttcgc tcctgcggcg tgaattccgg cggcccacgc aggccaagct ccttgagccc
     2221 caggcgcgcg cgcgccagtt gaccgtaata ggtggcggtg tgctgggccg cggcctcgta
     2281 gaaggcctta gcttgcgcgt tctggcccat ggcctccgct gcgcgtccct gccaatagcc
     2341 gccgcgaccg agagcg
//
LOCUS       DATDHO010000542         2515 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_174580, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000542 DATDHO010000000
VERSION     DATDHO010000542.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2515
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_174580"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1517
                     /locus_tag="VIY07_10410"
     CDS             <1..1517
                     /locus_tag="VIY07_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase"
                     /protein_id="HEY6382201.1"
                     /translation="AEMRTRALKVAKRLDKDGIKLGDRVATLAWNTWRHIEAWYGILG
                     IGAIYHTVNPRLFPEQIAWIVSHAGDRIMMTDLTFVPLLEKIADKLPNIERYIVLTDS
                     AHMPKTTLKNAVAYEDWIGEADDDFEWKSFDENTAAGMCYTSGTTGHPKGVLYSHRSN
                     VLHAFMAAMPDCKGLSSCDVILPVVPLFHANGWSLAFSSPMVGATMVLPGAKLDGPLI
                     YELLNTYKVTFTAAVPTVWLMLLQDLEKTGGKLPYLKRVVIGGSACPRAMTKAFQDKY
                     GVEVVHAWGMTEMSPLGSLCTMKPEYMELTGEERLDLQMKQGHPPFGVEMKITDDNDK
                     PLPWDGKTFGRLKVRGPAVAKGYYKVDRDPAFETDGWFDTGDVATLDPFGYMQITDRA
                     KDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVSHPKWDERPLLVIVLKKGESASKE
                     EILGFMQDKIAKWWMPDDVVFVDEIPHTATGKIQKLVLRQQFKDYRLPTVQAAE"
     gene            complement(1549..2304)
                     /locus_tag="VIY07_10415"
     CDS             complement(1549..2304)
                     /locus_tag="VIY07_10415"
                     /inference="COORDINATES: protein motif:HMM:NF012863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEY6382202.1"
                     /translation="MSPSCRALLLLLPMLFVCGTEGLAQDHSSVGGPSAACLAYQKGL
                     SLGAPLPRTKTKLAAGQTLKIVALGSSSTTGFGLLNASGAFPDVMKQELVRLRPTARI
                     ELVNSGRIMENIPDNIARLEHDVLRHRPDLVVWQLGSNDAVWRGIADNAKEILTDAVK
                     RLKSANADVVLVDLQYAPLVLLTSRHVRMEKIIGDVSREQSVGQFPRFALMKRAVDGG
                     VRGLVGLDGLHKSAEGHRCIGVALAQMIDAAAR"
BASE COUNT          543 a          719 c          758 g          495 t
ORIGIN      
        1 atgccgaaat gcgcacccgc gcattgaaag ttgccaagcg gctggacaag gacggcatta
       61 agctgggtga cagggttgca acacttgcgt ggaacacctg gcggcacatt gaagcctggt
      121 atggcattct cggcattggc gcgatctacc acacggtcaa ccctcggctg ttccccgaac
      181 aaatcgcctg gatcgtaagt catgccggcg accggatcat gatgaccgat ctgaccttcg
      241 tgccgcttct ggaaaagatc gccgacaagc tgccgaacat cgagcgctac atcgttctga
      301 ccgactcagc gcacatgccg aagacaacct tgaagaatgc ggtggcttat gaggactgga
      361 tcggtgaagc agacgatgac ttcgaatgga aatcgtttga cgagaacacg gcggcgggca
      421 tgtgctacac gtccggcacc accggacatc cgaagggcgt gctctattcg catcgctcca
      481 atgtgttgca cgcctttatg gcggctatgc cggactgcaa gggcttgtcg tcgtgcgacg
      541 tcatcttgcc tgtcgtgccg ctgttccatg ccaatggctg gtcgcttgcc ttttcctcgc
      601 cgatggtcgg agccacgatg gtgctgccgg gcgcgaagct cgatggccct ttgatttacg
      661 agctgctcaa cacctacaag gtcaccttca cggcagctgt gccgacagtc tggctcatgc
      721 tgctgcagga tctggaaaag accggcggca agctgcctta tctcaagcgc gtcgtgattg
      781 gcggctcggc ctgtccgcgt gccatgacca aagctttcca ggacaaatac ggcgttgagg
      841 tcgtgcatgc ctggggcatg accgaaatga gtccgctcgg ctcgctctgc acgatgaagc
      901 ccgaatatat ggagctcacc ggcgaggaac gcctggacct ccagatgaag caaggtcacc
      961 cgccattcgg cgttgagatg aagatcactg atgacaacga caagccgctg ccgtgggacg
     1021 gcaagacgtt cggtcgcctg aaggtgcgtg ggccggcggt cgctaagggc tattacaagg
     1081 tcgatcgcga cccggcattc gaaacggacg gctggttcga cacgggcgac gtggccacgc
     1141 tggatccatt cggctacatg cagatcaccg accgcgccaa ggacgtgatc aagtcgggcg
     1201 gcgaatggat ttcctccatc gacctcgaaa atctcgcggt tggtcatccc aaggtggccg
     1261 aggcagccgt gatcggcgtg tctcacccga aatgggacga gcggccgctg ctggtcatcg
     1321 tgctcaagaa gggtgaaagc gccagcaagg aggaaatcct cgggttcatg caggacaaga
     1381 tcgcgaagtg gtggatgccg gatgacgtgg tcttcgtcga cgaaattccg cacacagcga
     1441 ccggcaagat ccagaaactt gtgttgaggc agcagttcaa ggactatcgg ttgccgaccg
     1501 tacaggcggc tgagtgaggc tgcccgtcgc gacgacacct gtcttgcgct aacgcgcggc
     1561 ggcgtcgatc atttgcgcaa gggcgacgcc gatacagcgg tgaccctcgg ccgatttgtg
     1621 gagaccgtcc agtccgacca gacccctgac gcctccatcg acagcgcgtt tcatcagcgc
     1681 aaatcttgga aactgaccga cgctctgttc gcgggacaca tcgccgatga ttttttccat
     1741 ccgaacatgg cggctcgtga gcaatacaag cggggcatat tgcaaatcca cgaggacgac
     1801 atcggcgttg gctgatttga gtcgtttcac ggcatcggtg aggatttcct tggcattgtc
     1861 ggcgatgcca cgccagaccg catcgttgct cccaagttgc cagaccacca gatcgggtct
     1921 gtgacgcagg acatcgtgtt caaggcgggc aatgttgtcc gggatgttct ccataatgcg
     1981 cccgctgttg accagctcga ttcgcgcggt ggggcgcaat cggaccaact cctgcttcat
     2041 cacatcggga aaggcgccgc ttgcgttcag gagtccaaaa ccggtcgtcg aggacgatcc
     2101 gagcgcgaca attttcagcg tttggcctgc cgccagcttc gttttcgtgc ggggtagcgg
     2161 cgcgccgagc gacaaccctt tctgataagc cagacaagcc gctgacggac caccgacgga
     2221 ggaatggtct tgcgccaacc cctcggtgcc gcaaacgaac agcatcggca gcaacagcaa
     2281 caaggcgcga cagctagggg acattggtcg gagtgtcttc gcggacgtca aaatctaatc
     2341 acgaatttgg cgcggaacgg cattccaggg gggccgagcg cccgcggcat gatggcgctg
     2401 tgggtagggt ttgtcataat cgcctatcta tattgtcaat aatgacatct ggtctacata
     2461 gacgaaccaa accatctttg catccgcaga taacgaccac ggagcaaaat caatg
//
LOCUS       DATDHO010000543         4381 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_25973, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000543 DATDHO010000000
VERSION     DATDHO010000543.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4381
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_25973"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1203)
                     /locus_tag="VIY07_10420"
     CDS             complement(<1..1203)
                     /locus_tag="VIY07_10420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/OsmC family
                     protein"
                     /protein_id="HEY6382203.1"
                     /translation="MRTERTEFTNAKGEKLAALIDLPLGKPVAFALFAHCFTCGKDNL
                     AAKRISERLAISGIGLLRFDFTGLGMSEGEFANTHFSSNVEDLVAAADHLRRAYGAPA
                     ILIGHSLGGAAILAAAHRISDARAVVTIAAPYDPAHVTGLFKEQVQTIREHGEVEVQL
                     AGRPFRIKREFLDDVAEKKLEECVKNLRKALLIFHSPTDNIVGIENASRIFTTAKHPK
                     SFVSLAGADHLLSQKSDAVYVANMIAAWVERYLDQPAAPADTVETGTVLVRETGGGKF
                     QQEISSGPHRFLADEPVKVGGLDSGPGPYDLLLAALGACTSMTLRLYADNKKLPLERV
                     SVRLAHNKIHAEDCLNCETKEGLVDRIDRNISLEGALSTEQRKRLLEIADKCPVHRTL
                     ESEIEIRTS"
     gene            1443..2831
                     /locus_tag="VIY07_10425"
     CDS             1443..2831
                     /locus_tag="VIY07_10425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CmpA/NrtA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY6382204.1"
                     /translation="MSTFDNPFDPTRSLDNSGCSCGRHVSQAEHERDATAQLQCVAVG
                     SEDKRFEHVVASAVMRAVFPADRGRRAFLQSLGASAALGALSQFFPLKTATEIFAAGG
                     PIEKKDLKVGFIPITCATPIIMAKPMGFYEKQGLNVEVIKTAGWAVIRDKTINKEYDA
                     AHMLSPMPLAITMGVGSKPIPYTMPAVENINGQAITLAIKHKDKRDPKDWKGMKFAVP
                     FDYSMHNYLLRYYVAEHGIDPDQDIQIRAVPPPEMVANLRADNIDGFLAPDPVNQRAV
                     YDGVGFIHVLSKEIWDRHPCCAFAASKEFVTESPNTYAALLKAIIDATAFAHKPENRK
                     QIAEAIAPANYLNQPVTVVEQVLTGTFADGLGNVKKVPDRIDFDPFPWQSFAVWIMTQ
                     MKRWGQIKGDVDYAKIAEEVFLATDTARLMKEVGLAPPTATSKTFVVMGKTFDPAKPE
                     DYLKSFKIKKVV"
     gene            2832..3674
                     /gene="ntrB"
                     /locus_tag="VIY07_10430"
     CDS             2832..3674
                     /gene="ntrB"
                     /locus_tag="VIY07_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007612145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015414 - ABC-type nitrate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015706 - nitrate transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate ABC transporter permease"
                     /protein_id="HEY6382205.1"
                     /translation="MKTASLTGRAAVVSLALLFSFLVAWHLVTRDTGTAQRMDPEYAK
                     LMGATATQGKSAMPGPIDVGTKLWEHLRRPFYDNGPNDKGVGFQLAFSIARVLTGYLL
                     AILVAVPLGFLIGMSPLMSKALDPFIQVLKPISPLAWMPLALYTIKDSSLSAIFVIFI
                     CSLWPTLINTAFGVASVRREWLNVAKTLEVGTFRRAFTIILPAAAPTILTGMRISIGI
                     AWLVIVAAEMLVGGTGIGYFVWNEWNNLSITNVITAILVIGIVGMLLDLMLARLARLV
                     TFPE"
     gene            3678..>4381
                     /locus_tag="VIY07_10435"
     CDS             3678..>4381
                     /locus_tag="VIY07_10435"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382206.1"
                     /translation="MTDRFISIEGIARSYPKSGGGHTSIFENLWLSMDRGEFICVIGH
                     SGCGKTTVLNILAGLDTPSNGAVIVDGQAIEGPSLDRAVIFQSHALLPWRTVLGNVAY
                     AVSSKWRDWKTAKVNAHAQKFIDLVGLSGAEHKRPAELSGGMKQRVGIARALSIEPKI
                     MLMDEPFSALDALTRGTLQDEVRRICQETGQTVFMITHDVDEAIYLADKVVLMTNGPG
                     AVLAEIVENPLPKERAR"
BASE COUNT          896 a         1273 c         1306 g          906 t
ORIGIN      
        1 ggacgtacga atttcaatct ccgattccag cgtccgatgt accggacact tgtcggcgat
       61 ctccaggagt cgcttgcgct gctcggtgct gagtgcgcct tccaaactta tattgcgatc
      121 gatgcgatcg accaggcctt ccttggtttc acaattaagg caatcctcgg catggatttt
      181 gttgtgagcg agccgcaccg acacgcgttc aagtggcaac tttttgttat ctgcgtagag
      241 cctcagcgtc atcgatgtgc aggcgccgag ggcagcgagc aacagatcgt aagggcccgg
      301 accggaatcg agcccgccca ctttaaccgg ctcgtcggca agaaaacgat gtggaccgct
      361 tgaaatctcc tgctgaaatt tgccgccacc ggtctcgcgc acaagaacgg tgccagtctc
      421 aaccgtatcg gccggcgcgg caggctggtc gagatagcgt tcgacccagg cggcaatcat
      481 gttggctacg tagaccgcat cgctcttctg gctcagcagg tgatcggcgc cggcaagcga
      541 gacgaaactt tttggatgct ttgccgtggt aaaaatccgc gaggcatttt cgataccgac
      601 tatattgtca gtaggcgaat ggaagatcag cagcgccttg cgcaggtttt tcacacattc
      661 ctcgagcttc ttttctgcaa catcgtcgag aaattcgcgc ttgatacgga atggccgccc
      721 ggccagttga acctctacct cgccgtgttc ccggatcgtt tggacctgtt ccttgaacag
      781 gcccgtgacg tgcgcgggat cgtagggtgc ggctattgta acgaccgcac gcgcgtccga
      841 aatgcgatgc gccgcagcga gtatggcggc gccacccagg ctgtggccga tcaggattgc
      901 aggcgcgcca tacgctctac gtaagtggtc tgccgctgcg accagatcct cgacgttcga
      961 ggagaaatgc gtattggcga actcgccttc gctcatgccg agaccggtga aatcgaagcg
     1021 cagcaagccg attccggata tcgccagccg ttcggaaatg cgcttggctg caaggttatc
     1081 cttgccgcag gtaaagcaat gcgcgaatag cgcgaaggca acgggtttgc ccagtggaag
     1141 atcgatcaag gcggccagtt tttcgccctt cgcattggta aattcagttc tctcggtgcg
     1201 cacgattggc cctttcttcg aaacggcttc cttgcgacag gagccggcac aggctgccga
     1261 agattagtgc gtttgcccaa gaaaagggca acttcaggcc cggcctgcgc gatttcggcc
     1321 ggaatatcgg ttggattggc tcgttcgact ggcgcgcatt tttgcacaac ttctggcacg
     1381 tcgattgcaa ataccgcgtg tgaatggccg gcgtgggacc ggcccaacgg ggatgcgcag
     1441 ccatgtccac attcgacaat ccatttgacc cgacacggtc actagacaac agcggatgca
     1501 gttgcggccg ccatgtcagc caggccgagc acgagcgcga tgcgaccgcg caattgcaat
     1561 gcgtcgcggt cgggagcgag gataaacgtt tcgagcacgt cgtcgcgtcc gcggtcatgc
     1621 gcgcggtttt ccccgccgac aggggccgcc gcgcgttcct gcaatctctg ggcgcatcgg
     1681 cggcgttggg cgcgttgtcg caatttttcc cgctaaagac agcgaccgag atcttcgcgg
     1741 cgggcggccc gatcgagaag aaagacctca aggtcggatt tatccccatc acctgcgcga
     1801 caccgatcat catggcgaag ccgatgggct tctacgaaaa gcagggcctg aacgtagagg
     1861 tgatcaaaac cgccggctgg gcggtgatcc gcgacaagac gatcaacaag gaatacgacg
     1921 ccgcgcacat gctgtcgccg atgccgctgg cgatcacaat gggggtcggc tcgaagccga
     1981 ttccatacac gatgccggcg gtcgaaaaca tcaacggcca ggcgatcacg cttgccatca
     2041 agcacaagga caagcgcgac ccgaaagact ggaaaggcat gaaatttgcg gtgccttttg
     2101 actattcgat gcacaactat ttgcttcgct actacgtggc cgagcatggc atcgatcccg
     2161 atcaggacat ccagatccgc gcagttccgc cgccggaaat ggtggccaat cttcgcgccg
     2221 acaatatcga cggattcctt gcaccagatc cggtgaatca gcgtgccgtc tacgacggcg
     2281 tcggcttcat ccacgtgctg tcgaaggaaa tctgggaccg gcatccatgc tgcgccttcg
     2341 cggcatccaa ggaattcgtt accgaaagcc cgaatacgta cgccgcgctg ctcaaggcga
     2401 tcattgacgc gacggctttt gcgcacaaac cggagaatcg caagcaaatc gccgaggcaa
     2461 tcgcgccggc caactatctc aaccagcccg tgaccgtggt cgaacaggtg ttgactggta
     2521 ctttcgcgga cgggctgggc aacgtgaaga aggtgcccga tcgcatcgat ttcgatccat
     2581 tcccgtggca gtcgttcgcg gtttggatca tgacgcagat gaaacggtgg gggcagatca
     2641 agggcgacgt cgactacgcc aagatcgcgg aagaagtttt tcttgctacc gataccgcca
     2701 ggctgatgaa ggaggttggg ctggccccgc cgacggcgac atcgaagacc ttcgtcgtca
     2761 tgggaaaaac cttcgatccc gcgaagccgg aggattacct caagagcttc aagatcaaaa
     2821 aggttgtctg aatgaagacg gcatcgctga ccgggcgcgc ggccgtcgtt tcactcgcgc
     2881 tgttgttcag tttccttgtt gcatggcatc tcgtcacccg cgacacgggc actgcgcaac
     2941 gcatggatcc ggaatacgcc aagctgatgg gcgcgaccgc gacccagggc aagtccgcga
     3001 tgccggggcc catcgatgtc ggcaccaaac tttgggagca tctgcgccgc ccgttttacg
     3061 acaatggacc gaacgacaaa ggcgtgggct tccagcttgc tttttcgatc gcgcgcgtgc
     3121 tcaccggcta tctgttggcg atcctggtgg ccgtcccgct cggtttcctg atcggcatgt
     3181 cgccgctgat gagcaaggcg ctcgatccgt tcatacaagt gctcaagccg atctcgccgc
     3241 tcgcctggat gccgctcgcg ctctacacca tcaaggattc cagcctttcg gcgatcttcg
     3301 tgatctttat ttgttcgctg tggccgacat tgatcaatac tgccttcggc gtcgcttccg
     3361 tacggcgcga atggctaaac gttgcgaaaa ccctggaggt tggcactttc cgtcgcgcct
     3421 ttaccatcat ccttccggct gcggcgccga cgatcctgac cggaatgcgg atttcgatcg
     3481 gcattgcctg gctggtcatc gttgcggccg agatgctcgt gggcggcacg gggatcggat
     3541 atttcgtctg gaacgaatgg aataaccttt cgatcacgaa cgtgatcacc gcgatcctgg
     3601 tgatcggcat tgtcggcatg ctgctcgacc tgatgctggc gcggctcgcg cgcctggtca
     3661 cttttccgga gtgaagcatg accgaccgtt tcatctccat cgaaggtatc gcgcgcagtt
     3721 atccgaaatc cggcggcgga cacacaagca tcttcgagaa cttgtggttg tcgatggacc
     3781 gcggagaatt catctgcgtg atcgggcatt ccggctgcgg gaaaacgacc gttctgaata
     3841 ttctcgccgg actcgatacg ccctcgaatg gcgccgtgat cgttgacggg caggcgattg
     3901 agggcccgag cctcgatcgt gcggtgatct ttcagagcca tgcactgctg ccatggcgca
     3961 cggtcctggg caatgtcgct tatgctgtgt cttcgaaatg gcgcgattgg aagaccgcca
     4021 aggtcaatgc gcatgcgcag aaattcatcg atctggtcgg tctcagcggt gctgagcaca
     4081 agcgccccgc tgaattgtcc ggaggaatga agcagcgcgt cggcatagcc cgcgcgctgt
     4141 cgatcgagcc aaagatcatg ttgatggacg agccattctc cgcgctcgat gcgcttacgc
     4201 gcgggacctt gcaggacgaa gtgcggcgga tttgccagga aaccgggcaa accgtgttca
     4261 tgatcacgca cgacgtcgac gaggcaatct atctcgccga caaggtggtg ctcatgacca
     4321 acgggccggg tgcggtgttg gcggaaatcg tcgagaaccc gcttccgaaa gagcgcgcac
     4381 g
//
LOCUS       DATDHO010000544         1670 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_372326, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000544 DATDHO010000000
VERSION     DATDHO010000544.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372326"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            422..1297
                     /locus_tag="VIY07_10440"
     CDS             422..1297
                     /locus_tag="VIY07_10440"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6382207.1"
                     /translation="MKIIILLFFTAAVVLAAEPRVQRDIPYAETKNVRQTLDVYADPN
                     ASNRPIVFWIHGGGWVRGDKSEVKTKPAAFVDRGYVFVAINYRFVPDATIKEIAGDVA
                     KALRWVHRNAGQYGGDPNSIFVMGHSAGAQLAALVCIDDRYLKAEGLSLRMVKGCVPV
                     DGDTYDVATQVKMVEAVQQRPYFDSHRRKFGHEAALEELSAVTHVARDKGIPPFLIIH
                     VADYPQSRTGLQSHLLATSLIHHGGVSAKVLSVPGKTHETLDSDLGMPGDLTTDAIVR
                     FVSEQLNPAPSTVTR"
     gene            1352..>1670
                     /locus_tag="VIY07_10445"
     CDS             1352..>1670
                     /locus_tag="VIY07_10445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382208.1"
                     /translation="MKLTRRHFIGSSATAVVVAGRKAQGKVFGSNNRIRVCTIGFNGQ
                     GSSHIKEILGLKDEAEYAALCDVDANVLAQGARIVEAAQGKAPKLYKDIREALEQKDI
                     DVVT"
BASE COUNT          382 a          501 c          487 g          300 t
ORIGIN      
        1 aggtcaatgt tacgggcaat tggcaatacg attctcaatg gtgacacacg tcgccgcaaa
       61 ccgccgacaa cacagatttc ggcagcgctg ctatcaacgg tggcaaggtg cagaaagtct
      121 tcaatatcta gaacgccggc agcgccacgc tcacgcttgg cgaagtctcc gcacccggcg
      181 acttctcggt aatcgtgcag ccgggaacta gcattgctcc gggaggcgac gccaacttca
      241 ccgtggagtt cgaaccccgg agcttgggac tgcgaaccgg taccatcagc ttcatcaaca
      301 acgatacggc cgcgcccagc gagagtccct acaacatcac tattcggggc ccgggcatat
      361 gaccatgact gtttgttcgt tcgccgccga aagatggcga gagctcgact aaggttccac
      421 tatgaaaatc atcatcctgt tgtttttcac cgcggcggtc gtcttggccg ccgaacctcg
      481 cgtgcaacgc gacatccctt atgccgaaac gaaaaatgtg cggcagacgc tcgacgtcta
      541 tgctgatccc aatgcgagta accgcccgat cgtgttttgg attcacggcg gcggttgggt
      601 gcgcggcgac aaatcggaag tgaagacgaa gccggcggcg ttcgtcgacc ggggctatgt
      661 gttcgtggcc atcaactacc gcttcgtacc cgacgccacg ataaaggaaa ttgccgggga
      721 cgtcgcgaag gcgctgcgct gggtacatcg caacgccggc caatatggcg gcgatccgaa
      781 ttcgattttc gtcatgggcc attcggcggg cgcccaactg gcggcgctgg tgtgcattga
      841 tgatcgctac ctcaaggccg agggactctc gctgcgaatg gtcaaaggat gtgtgcctgt
      901 ggacggcgac acctacgacg tggccacgca agtgaagatg gttgaagcag ttcagcagcg
      961 gccgtatttc gactcgcacc gccgcaaatt cggccatgag gccgcgctcg aggagctgtc
     1021 ggctgtcacc cacgtggcgc gggacaaagg catcccgccg ttcttgatca tccacgtcgc
     1081 cgactacccg cagagccgca ccggtctgca atcgcatttg ctcgcgacga gtttgatcca
     1141 ccacggcggc gtctccgcca aagtgttatc cgtgccggga aagacgcatg agactctcga
     1201 ttcggacctg ggaatgcccg gcgacttgac gaccgatgcc atagtgcgct ttgtcagcga
     1261 acaactaaat cccgcgccct cgaccgtaac tcggtgacgg ggcaactcac aaagaccagg
     1321 aaaccaccaa tggaaagggg ctcaagaaaa catgaaactc actcgcagac acttcatcgg
     1381 ttcctccgcg acggcggtcg tcgtcgccgg caggaaagcg cagggcaagg tattcggctc
     1441 caacaatcga atacgggtat gcaccatcgg cttcaacggt caggggagca gccacatcaa
     1501 agagatcctc ggcctcaagg acgaagccga atacgccgcg ctctgcgatg tcgacgcgaa
     1561 tgtccttgcg caaggcgcaa ggatcgtcga ggcggcccag ggcaaggcgc ctaaactcta
     1621 caaggacatc cgcgaagcgc tggagcaaaa agacatcgac gtcgtcacga
//
LOCUS       DATDHO010000545         1868 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_26063, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000545 DATDHO010000000
VERSION     DATDHO010000545.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1868
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26063"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1034)
                     /locus_tag="VIY07_10450"
     CDS             complement(<1..1034)
                     /locus_tag="VIY07_10450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY6382209.1"
                     /translation="MSYFTRRALIKSGTAAAAAGALTGPALLEWAKAWAQAAPWKPEN
                     GAQLSMLRWKYFVQSEDDAFVKLIDAFTQATGVKVTIARESYEDIPPKASVAANTGSG
                     PDLFWGLFSLPHLFPQKCVDVTDVADYLGKKYGGWVPTAVTYGKSGNKWIAIPICFGG
                     NMLNYRTSVLQKAGMSKFPATTDEFLEFAKATKRNNTPGGMALGHATGDGNCWVHWCL
                     WAHGGNVVDKDDKVILNSPETEKALNYAKQLYENMIPGTAAWNDAFNNKAFLAGEISW
                     TNNGISIYAAAKRDATKKEIAEDMNHALWPVGPVGKPTEFHVCFPTLAMTYTKYPQAC
                     KALIAYLLEA"
     gene            complement(1053..>1868)
                     /locus_tag="VIY07_10455"
     CDS             complement(1053..>1868)
                     /locus_tag="VIY07_10455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6382210.1"
                     /translation="LYPHMTVAANMAFSMKLRGAPKKEIDERVSRAAAILGLSQLLER
                     YPRQLSGGQRQRVAMGRAIVRDPQVFLFDEPLSNLDAKLRVQMRTEIKELHQRLKTTT
                     IYVTHDQIEAMTMADKIVVMHDGRVEQIGAPLELYDRPDNLFVAGFIGSPAMNMIKGR
                     IRVNGSASFENSAGVTFALGSAPTGSDGRPIVYGVRPEHFLLSDDGADAEVQVVEPTG
                     SELQVVAKLGGEDVIAVFRERHQFKPGDKIRLKPDPRLIHLFDETTGKRLSIQ"
BASE COUNT          334 a          556 c          570 g          408 t
ORIGIN      
        1 tctgcctcga gcagataggc gatcagcgcc ttacaggcct gcggatactt cgtgtaggtc
       61 atcgccagcg ttgggaagca cacatggaac tcggtcggct tgccgaccgg cccgaccggc
      121 cacagcgcgt ggttcatgtc ctcggcgatc tccttcttgg tggcatcacg cttggccgcc
      181 gcgtaaatcg agatgccgtt attggtccag gaaatctcgc ctgcgaggaa cgccttgttg
      241 ttgaacgcat cgttccatgc cgccgtgccc gggatcatgt tttcgtagag ctgcttggca
      301 tagttaagcg ccttctcggt ctccggcgaa ttgaggatca ccttgtcgtc cttgtcgacc
      361 acgttgccgc catgcgccca caggcaccag tgcacccagc aattgccgtc gccagtagcg
      421 tgtccgagcg ccatgccgcc cggcgtgttg ttgcgcttgg tcgccttggc gaattcgagg
      481 aattcgtcgg ttgttgccgg gaacttggac attcccgctt tctggagcac tgacgtccgg
      541 tagttgagca tgttgccgcc aaagcagatc ggtatcgcga tccacttgtt gccactcttg
      601 ccgtaagtga cggcggttgg cacccagccg ccatacttct tgccgagata atcggcgacg
      661 tcagtcacgt cgacacattt ctgcgggaac aggtgcggca gcgagaacag gccccagaac
      721 aagtccgggc cggagccggt gttggcggcg accgaggcct tcggcgggat gtcttcgtag
      781 gattcccggg caatggtgac tttcacgccg gttgcctgag taaacgcatc tatcagcttg
      841 acgaaggcgt cgtcttccga ctgcacaaaa tacttccaac gcagcatcga aagctgcgcg
      901 ccgttctctg gcttccaggg cgccgcttgt gcccaggcct ttgcccattc gagaagagcg
      961 ggaccggtga gggcaccggc tgcagcggcc gcggtaccgc ttttgatcag ggcgcgacgc
     1021 gtaaagtagc tcatgcttat tcctcccttt gcttattgga tgctgagacg cttacccgtc
     1081 gtctcgtcaa aaagatgaat tagccgcggg tctggcttga gccggatctt gtcgcccggc
     1141 ttgaattggt gacgctcgcg gaagaccgcg atgacgtctt cgccgcccag cttggcgacg
     1201 acttgcagct ccgatccggt gggttcgaca acctggactt cagcgtccgc gccgtcatcg
     1261 gagagcaaga aatgctcggg ccttacccca taaacgatcg gacggccgtc gctcccggtc
     1321 ggggcgctac ccagagcgaa cgtgactccg gcggaatttt caaacgacgc gctcccgttc
     1381 acgcggatgc gtcccttgat catgttcatg gccggcgatc cgataaagcc ggcgacgaac
     1441 agattgtcgg gacgatcata gagctcgagc ggtgcgccga tctgttcgac gcgtccatca
     1501 tgcatcacga cgatcttgtc ggccattgtc atggcctcga tctggtcgtg cgtcacgtaa
     1561 atcgtggttg tcttcagtcg ttggtgcagc tccttgattt cggtgcgcat ctgcacgcgc
     1621 agcttcgcgt caagattcga cagcggttcg tcgaaaagaa aaacctgggg gtcgcgcaca
     1681 atggcgcggc ccatggcgac gcgttgacgt tgtcctccgg acagctgccg cggatagcgt
     1741 tcgagcagtt gagagaggcc gaggatcgcg gcagcgcgac tgacgcgctc gtcgatctct
     1801 ttcttgggag cgccgcgcag cttcatggaa aaagccatgt tggcggccac cgtcatgtgc
     1861 ggatagag
//
LOCUS       DATDHO010000546         1721 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_224314, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000546 DATDHO010000000
VERSION     DATDHO010000546.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224314"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            103..1335
                     /locus_tag="VIY07_10460"
     CDS             103..1335
                     /locus_tag="VIY07_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HEY6382211.1"
                     /translation="MIRRSWTRAASIEETLALWAASLREIKKRIRPLFKQERVAANAG
                     LFLEGLLGDEQRKTGWMRAEAAGDPGPWRQQAILGRRDWDADALRDIVRDYVIEHLAD
                     DDAVLVIDETGFLKQGKASCGVARQYTGSAGKITNCQIGVFAAYVSRHGHAFIDRALY
                     LPQEWTDDPDRLEAAYVPADIGFATKPRLVTGMIARAIAAAVPFSWVAGDTVYGVGDI
                     EQQLRRAGKGYVLGVSSAHVFRSWGKRQPVAGKAADIARTRRSSDWKRLSAGDGTKGP
                     RLHDWCYLELADLEVEQFNSANQDLWTRGLLIRRHIADGDLAFFTTWCPAGTSIETLV
                     AVEGRRWAIEDSFETAKNEFGLDHNESRSWHGWHRHVSLVMLAFAMMAAIRHRANPPS
                     PKKTNRTMIKTKASPRRH"
     gene            complement(1465..>1721)
                     /locus_tag="VIY07_10465"
     CDS             complement(1465..>1721)
                     /locus_tag="VIY07_10465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382212.1"
                     /translation="PGRAQRWAVHDGQDRLPLMVREVILCLPASALLTLGGRRDIERR
                     ALSHMLAISGGRERPHCAVLLGASRQTSLEDSSITAVFLL"
BASE COUNT          354 a          507 c          540 g          320 t
ORIGIN      
        1 aacggtgtcg aaaccgccga tccctggggc acccgcctgc ggtttattag ggcctagcat
       61 tacagttgct ttatcggaag ggttctgaat ccatgggcga ccatgattcg gagatcgtgg
      121 acgcgggcag cgtcgattga agagacgctt gcgttgtggg cggcgtcgct tcgggagatc
      181 aagaagcgga tacgtccgtt gttcaagcaa gagcgtgttg cggcgaatgc aggtctgttc
      241 ctggagggtc tgctcggcga tgagcagcgc aagaccggct ggatgcgcgc ggaggcggct
      301 ggcgatcccg gcccatggcg gcagcaggcg atcctgggtc gcagggattg ggatgccgat
      361 gcgctgcgcg atatcgtacg cgattatgtc atcgagcatt tggcggatga cgatgcggtg
      421 ctggtgatcg acgagaccgg ctttctcaag cagggcaagg catcgtgcgg agtggcgcgg
      481 caatacactg gttcggcggg caagatcacc aactgccaga tcggcgtgtt cgctgcctac
      541 gtttcgcgcc acggtcatgc gttcatcgat cgtgcgctgt atcttccgca ggaatggacc
      601 gacgatccag atcgcctgga agccgcatac gtgcctgccg atatcggctt tgccaccaaa
      661 ccaaggcttg tgacgggaat gatcgcacgc gcgatagccg cggctgtacc attcagttgg
      721 gttgccggtg ataccgtcta cggtgtcggc gacatcgaac aacaactacg ccgagcaggc
      781 aaaggctatg tgctcggggt tagcagcgct catgtgtttc gatcctgggg caagcggcag
      841 ccggtcgccg gcaaggccgc ggacatcgcc cggacgcggc gctcatccga ctggaaacgt
      901 ctgtcggcag gggatggaac caaaggaccg cggctgcatg actggtgtta tctcgaattg
      961 gccgatctcg aggtcgagca attcaacagc gcaaatcaag atctgtggac ccgcggtctg
     1021 ctgatccgtc gtcatatcgc cgatggcgat ctcgccttct tcaccacctg gtgtccggcg
     1081 ggaacatcca tcgaaacgct ggtggcggtc gaaggccgcc ggtgggcgat cgaggacagt
     1141 tttgagaccg cgaagaacga gttcggcctc gaccacaacg agagcagatc ctggcatggt
     1201 tggcatcgcc acgtgtccct ggtgatgctc gccttcgcca tgatggccgc gatccgccat
     1261 cgcgctaatc cgccgtcgcc aaaaaaaacg aaccgcacca tgataaaaac caaagcatcg
     1321 ccacgccgtc attgatccgt tggtcaatcc aggaagttcg ccgcatcgcc atcagactcg
     1381 cgcggaaccg gatccaaccc gcgcatatta tcgcatggtc actctggcga agagctcacc
     1441 aggccgccgc tcagcgcgct cacctcaaag caaaaagaca gctgtaatgc tagagtcctc
     1501 aagactggtc tgtcgggacg cacccagcag caccgcacaa tgtggtcgct cgcgcccgcc
     1561 gctgatcgcg agcatgtggg agagcgcacg ccgctcaatg tcgcgacgcc cgcccaaagt
     1621 cagcagtgcc gaagcgggca aacataaaat gacctctctc accatcaaag ggaggcggtc
     1681 ttggccgtcg tgtaccgccc aacgttgcgc ccggcccgga t
//
LOCUS       DATDHO010000547         2647 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_224418, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000547 DATDHO010000000
VERSION     DATDHO010000547.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2647
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224418"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..502
                     /locus_tag="VIY07_10470"
     CDS             <1..502
                     /locus_tag="VIY07_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEY6382213.1"
                     /translation="YAASLSPLPSDSRLLSPAAPAAANAANITTIATVRSDPPLTAPP
                     VAAQSAVPSSPAPQQETPPIKVATAANQTLAAGDEQPAVRPRGGWLIQVGALPDEKEA
                     RQRLEEAQNKAKNMLSKADPFTERLEKGDKVLFRARFAGLDKGQAEAACKHLKRSDIP
                     CMLLKN"
     gene            complement(568..1269)
                     /locus_tag="VIY07_10475"
     CDS             complement(568..1269)
                     /locus_tag="VIY07_10475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEY6382214.1"
                     /translation="MPTLIFGVVVLVLILWVLNVIAKVDPKVAARVTKVGGGMVSLGL
                     AVFLGLRGEIGIAIPLGVFGLGLLGWVPFGPAGFTARTQKSGGQTSQVRSAYFEMELD
                     HDSGAMRGRVLAGRHQGADLERLDVGTLVSMLTEVDEESRALLVAYLDRRDPAWSEHA
                     QADAAAGRHASSSGKMSEQEAYQILGLQPGASAEDISRTHRTLMKKLHPDQGGSTYLA
                     ARINEAKEILLRRHR"
     gene            complement(1272..1982)
                     /locus_tag="VIY07_10480"
     CDS             complement(1272..1982)
                     /locus_tag="VIY07_10480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY6382215.1"
                     /translation="MSKDSERSPAPVSSKPDIQAFIEQLRALGPSTAQGKRGRLIFAL
                     DATMSRQPTWDNACTLQADMFREAASIGGLDIQLVYFRGLGECRSSGWVAAGDKLAEL
                     MSRIDCRGGQTQIGKVLSHARQEHARGKVQALVFVGDAMEEAIDGLCQAAGELGLLGV
                     PAFMFQEGGDPIAENAYREIARLSHGAYCRFDAGSAHQLGELLRAVAAYAAGGKNALL
                     ELSKKQSPAAQRLLSQLK"
     gene            complement(2078..>2647)
                     /locus_tag="VIY07_10485"
     CDS             complement(2078..>2647)
                     /locus_tag="VIY07_10485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division plane positioning ATPase MipZ"
                     /protein_id="HEY6382216.1"
                     /translation="IDTPGSDTYLMRLAHSMADTLVTPLNDSFLDFDVLATLDPTDFT
                     VTGESHYAEMVREARRQRRLVDGQLTDWIVVRNRLSTLTSRNKKLVGDGISELSKRMG
                     FRTVEGFAERVVYREFFPRGLTALDNLDEETLGMRPNLSHVTAREEVIALLNALHLPL
                     SENGRRRAAARAEWYSVMDQPLQVHDIIS"
BASE COUNT          553 a          851 c          767 g          476 t
ORIGIN      
        1 atacgcggcc tcgctgtcac cgctcccgtc ggacagccgt ctactctcgc cggcggcgcc
       61 tgcggcagcc aatgccgcca acattacgac catcgctaca gtcaggagcg atcccccgct
      121 gactgcgccg cctgtcgctg cgcaatctgc agtgccttcg tcaccggcgc cacaacaaga
      181 gacgccgccg atcaaggtcg caacggctgc aaatcagacg ctggcggcgg gcgatgagca
      241 acctgctgtc cgaccccgtg gcggctggct aattcaggtc ggcgccttgc cggacgaaaa
      301 agaggcgaga caacgcctcg aagaagcgca aaacaaggcc aaaaatatgc tcagcaaggc
      361 tgacccattc accgaacgtc ttgaaaaagg cgacaaggtg ctcttccgtg cgaggttcgc
      421 gggtttagac aagggccagg cagaagccgc ttgcaaacac ctcaagcgca gcgacatccc
      481 atgcatgctg ctgaaaaact gaaaaacagg aataaccggg acgtgccact ggccaggagc
      541 cgctgatggt cgagtttgtg gagtacttca gcgatgtcgg cgaagaagga tttccttggc
      601 ttcattgatg cgagccgcga gatacgtcga gcccccctgg tcgggatgca gcttcttcat
      661 cagcgtgcga tgcgtgcggc tgatgtcctc ggcgctcgcg ccgggctgca ggccaaggat
      721 ctgataggcc tcctgttccg acatttttcc gctgctcgaa gcgtgccgcc ccgctgccgc
      781 gtccgcctgc gcgtgctcac tccaggcggg gtcccggcgg tcaagataag ccacaagtaa
      841 tgcacggctt tcctcatcga cttcggtaag cattgagacg agcgtgccga cgtcaaggcg
      901 ctcgaggtcg gcgccctggt gacgtccggc gagcacccgg ccccgcatcg caccgctgtc
      961 gtggtcgagc tccatttcaa aataagcaga tcgaacctgt gaggtctggc caccgctctt
     1021 ttgcgtgcgt gcggtaaaac ccgccggccc gaatggaacc catccgagca gtcccaatcc
     1081 aaatacgcca agcggaatgg cgatcccgat ttcgccgcgc aagcccagaa acacggcaag
     1141 tccaagcgag accatgccgc cgccaacctt cgtcacgcgc gccgcaactt tcggatcgac
     1201 tttggcaatg acgttcagca cccacaagat gagcaccaga acgacgacgc caaaaatgag
     1261 cgttggcatg gctacttcag ctgtgacagc agcctttgag cagcgggtga ctgcttcttc
     1321 gacaactcga gcagtgcgtt cttgccgccc gcggcgtagg ctgcgactgc ccgcaacagc
     1381 tcgccgagct gatgcgccga gcctgcgtca aaacggcaat aggcgccatg ggagagccgt
     1441 gcgatctcac gataagcgtt ctccgcgatc gggtcgccgc cttcctgaaa catgaaggcg
     1501 ggaaccccaa gcaggcccag ttcgccggcc gcctgacata gtccgtcgat cgcctcctcc
     1561 atggcatcac cgacgaagac caaagcctgc acttttccgc gcgcgtgttc ctgacgcgcg
     1621 tgactgagaa ctttgccgat ctgcgtctga ccgccgcggc agtcgatgcg cgacatcagc
     1681 tcggccaact tgtcgccagc cgcaacccag ccggacgacc ggcattctcc caagccccga
     1741 aaatagacca gctggatatc gagccccccg atgctcgctg cttcgcgaaa catgtcggcc
     1801 tgtagcgtgc atgcgttatc ccaggtcggc tgccggctca tggtggcatc gagcgcaaaa
     1861 atgagccggc cgcgcttgcc ttgcgcggtg gaaggaccaa gcgcgcgcaa ttgttcaata
     1921 aacgcctgta tgtccggttt ggacgaaacc ggcgccggac ttcgctctga gtccttgctc
     1981 atggcggaat tctacaccga aaccacggaa cctgcgcgct cctgcaccgc cacctgagat
     2041 ggcgacatgg gttcccagat gcaagtctgg ccgggttcta ggaaataatg tcgtggacct
     2101 gtagcggctg gtccatgacc gagtaccact ccgcccgggc ggcggcgcgt ctcctgccgt
     2161 tctccgaaag cggcaggtga agcgcgttta acagggcgat cacttcctct cgcgcggtga
     2221 catgcgacaa attcgggcgc atgccaagcg tctcttcatc cagattatcg agcgccgtca
     2281 gacctcgcgg gaaaaactcg cgatagacga cgcgctcggc aaagccttcc acggtacgga
     2341 accccatgcg ttttgataac tcgctgatgc cgtcgcccac cagcttcttg ttgcgcgagg
     2401 tcagcgtaga cagacggttg cgcacaacaa tccagtcggt gagctgcccg tcaacaagcc
     2461 gcctttgccg tcgcgcttca cgcaccattt cggcgtagtg gctctcaccc gtaactgtga
     2521 aatcggtcgg atccagagta gcaagcacgt cgaaatcaag gaaactgtcg ttgagcggcg
     2581 tgaccagggt gtccgccatc gaatgtgcaa ggcgcatcaa gtaagtgtcg gagccgggcg
     2641 tatcgat
//
LOCUS       DATDHO010000548         2360 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_468606, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000548 DATDHO010000000
VERSION     DATDHO010000548.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_468606"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(186..755)
                     /locus_tag="VIY07_10490"
     CDS             complement(186..755)
                     /locus_tag="VIY07_10490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HEY6382217.1"
                     /translation="MPDALELLKTRRSVKPIELGGPGPTADEIETLLRIASRVPDHGK
                     LAPWRFILFEGNGRSAAGEAIALTYGADHPDATADQLAFERNRLARAPLVIAVVSRAG
                     PHVKIPEWEQQLSAGASAMSLVFAAHAMGYAASWITEWYAYDRRVLDALGLSPHERIA
                     GFVHIGRPARPPQDRDRPSLESIVTRFGG"
     gene            866..1921
                     /locus_tag="VIY07_10495"
     CDS             866..1921
                     /locus_tag="VIY07_10495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382218.1"
                     /translation="MNGAPAIAARFARLGPAVLLAAFAVVPVGAMAQDATQTLAQNSL
                     FSATPSTGLISPAPATRSDIFGPSNLPIPSVPPAQGSSQGSNSANTTGSIPAVPPGQV
                     ALALSARFGKEALPIGGGLTWRVYGAKADTNGNFKLVKEDKSPTPTLVLPAGAYIVHV
                     GFGLATAVKPVELRAANVHEEFELPAGGLRIEGKVGDVRIPPGQISFDVYKGSQFEPG
                     DRRPIAEHVATSDVVVVPEGTYYIVSNYGEANSVVRSDIRVQPGKLTDITVTHRAAAI
                     TLKLVTDRGGEALANTAWSVLTPGGDVIKESIGAFPRVILAEGEYRAIARNEGKVYER
                     DFKVVTGVDGDVEVLAR"
     gene            1997..>2360
                     /locus_tag="VIY07_10500"
     CDS             1997..>2360
                     /locus_tag="VIY07_10500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HEY6382219.1"
                     /translation="MDLFTNLDLRKIALLLDVDGTIVDIGPSPAEVQIAAGLPETLKR
                     LFELTRGALALVSGRPISDLDRLFAPLHLPAVGGHGAEMRLSDNELFFWAKPLPEDLR
                     RCLAEGAALCPGVVVEDKG"
BASE COUNT          480 a          709 c          700 g          471 t
ORIGIN      
        1 caagccctcg aagaccacga acgttatctc cttagcgcgc tctctgccga agaaggctcc
       61 ggcagcgtcg tgtgaagcca gcaatatcag gattgctgac ggagtgttgt gaccgaaacg
      121 tgacagggag ggtgcgcccg ccctcattac ataaaggtta aatgtcaggc cggaccagag
      181 gttcctcagc cgccaaatcg cgtgactatg gactcgagac tcggccggtc acggtcctgt
      241 ggaggtcggg cagggcgccc gatatgcaca aaacccgcga tccgctcatg cggggacaac
      301 ccaagggcat cgaggacgcg ccggtcatag gcgtaccatt ctgtgatcca gctcgcggca
      361 taacccatcg cgtgcgcggc gaagacaagg ctcatagcgg aggcgcccgc ggacagttgc
      421 tgctcccatt cgggaatttt cacgtgtggg ccggcacgac tgacgacggc gataacaagc
      481 ggcgcgcggg cgagccgatt gcgttcgaac gcgagctggt ccgcggtagc gtcaggatga
      541 tccgcgccat aggttaaagc gatagcttcg ccggcagccg agcggccgtt accttcaaac
      601 aggatgaatc gccaaggcgc gagcttgcca tgatcgggca ctcgcgaagc aatccgcagc
      661 agcgtctcga tttcatccgc cgttgggcca gggccaccaa gctcgattgg ctttaccgaa
      721 cggcgcgtct tcaacagctc taaagcgtca ggcataggtc atctctgaac aatccgattg
      781 cgcctaccac agcgttaatc aggtcacaaa caacatgcga acgcggcttg aaatcgccgc
      841 gatttcggcc gaaaacaagc atgccatgaa tggagcacct gcaatcgccg cccggtttgc
      901 ccgcctaggg cccgcggttt tgctcgccgc ttttgcagtt gtgccggttg gggccatggc
      961 gcaagacgcg acacagaccc tggcgcagaa ttcgcttttc tcggcgacac catccaccgg
     1021 tttgatctca ccggcccccg cgacacgcag cgacatcttc ggaccgagca atttgccgat
     1081 accgtcggtg ccgcccgcgc aagggtcatc gcagggatcg aattcagcca atacgacagg
     1141 ttcaattccc gccgtacccc ccggtcaagt tgcgctcgcg cttagcgccc gctttggcaa
     1201 ggaggcgctg ccgatcgggg gaggcctgac ctggcgcgtc tatggcgcca aggccgatac
     1261 aaatggaaat ttcaagctgg tcaaggaaga caagtctccc acgcccacgc ttgtgcttcc
     1321 tgccggcgcc tacatcgtgc acgtcggttt cggacttgcc accgcggtca aaccggtcga
     1381 actgcgcgcc gccaatgtac acgaagaatt tgagctgcct gcgggcggac ttcgcataga
     1441 aggcaaggtc ggcgacgtgc gcattcctcc cggtcaaatc tccttcgacg tatacaaagg
     1501 cagccagttc gaaccgggcg atcgccgtcc tatcgcagag catgtagcga ccagcgatgt
     1561 cgtcgtggtc ccggaaggca cctattatat tgtctcgaat tacggtgagg ccaattcggt
     1621 cgtacgctcc gacattcgcg ttcagcccgg gaagttgacc gacatcacag ttactcatcg
     1681 cgctgccgcc atcacgctca aactggtgac cgatcggggc ggcgaggcgc tcgccaatac
     1741 cgcctggtcg gtcctcacgc ccggtggcga cgtgatcaag gaatcaatcg gtgcgtttcc
     1801 acgcgtaatt cttgccgagg gtgaatatcg cgcgattgcc cgcaacgaag gaaaagttta
     1861 cgagcgcgac ttcaaggtcg ttaccggcgt tgacggcgat gtcgaggttc tcgcgcgctg
     1921 acacgcgaac gttttgctga actttcttcc actgctcgga attatagtag tgcgggcgat
     1981 tgcagacgac gcgagtatgg atctttttac caatttggat ttgcgaaaga ttgcgctttt
     2041 gctcgacgtg gacggcacta tcgtcgatat cggcccgtcg cccgccgagg tacagattgc
     2101 cgcgggcctt cctgagacac tgaagcgttt gtttgaattg acgaggggtg cactcgctct
     2161 ggtgagcgga cgccccatca gcgatctcga tcgacttttc gcgcctttgc atttgcccgc
     2221 agtcggcggc catggggccg agatgcgctt gtcagataac gaactcttct tttgggcaaa
     2281 gccgttgcca gaggacctgc gtcgctgtct tgccgaaggt gcagcgcttt gcccgggcgt
     2341 tgtcgtcgaa gacaaaggct
//
LOCUS       DATDHO010000549         3425 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_274875, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000549 DATDHO010000000
VERSION     DATDHO010000549.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_274875"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..142)
                     /locus_tag="VIY07_10505"
     CDS             complement(<1..142)
                     /locus_tag="VIY07_10505"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6382220.1"
                     /translation="MLEVERLAVSYGEVAALRDVSLTINKAEIITLIGGNGAGKTTTL
                     KTI"
     gene            complement(135..926)
                     /locus_tag="VIY07_10510"
     CDS             complement(135..926)
                     /locus_tag="VIY07_10510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382221.1"
                     /translation="MTALLALDQLTRRFGGVTAVDSVSRNVEGGEIRGLIGPNGAGKT
                     TTLNLISGLTTPTSGRMTLVEQDITGEPAHRLAARGVRRTFQNLKLFAELTVLQNVMI
                     GLHTNGTSGVVEAILATRRQRREEEMMHRDSLTALETVGLADQAGRPASSLAYGHRRL
                     LEIARAIVARPTLLLLDEPAAGLNPTEAEALVALIRRINAQGVTVVLVEHHMDVIMAA
                     CSRITVLNYGQKLAEGTPTEIRANKSVIEAYLGRAGFEERIVAHA"
     gene            complement(923..1954)
                     /locus_tag="VIY07_10515"
     CDS             complement(923..1954)
                     /locus_tag="VIY07_10515"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382222.1"
                     /translation="MFKSEFPSAYLWTARIVVLAIFIALPFVYPQKYVVHIVSLAMIF
                     AIAALALQLLLGFAGLLSIGQAAFLGIGAYASAILTTTYKVPFEIAFIAAGLLAGIAS
                     LTLVPITRLRGVYLGVATLGFSIIAHLVFLNEEWLTGGSFGLLNIPSPSLGPWVLKTE
                     TGNYLLCLAVLVAVFVTLHRLLPSRFGRALQAIMLDEDAARASGINVTYYKSQAFVVA
                     AVITGFAGSLFAHHAHYLNPNDFTFWKSIEVLLMVTVGGIGSLAGAIVGAFVITLLPE
                     YLRVLDEYRMVIFGAMLVVFMGLGHRGLAGLSAALAMRLLRLRPQSDTASGPISQADT
                     VAAPRWSRR"
     gene            complement(1962..2846)
                     /locus_tag="VIY07_10520"
     CDS             complement(1962..2846)
                     /locus_tag="VIY07_10520"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382223.1"
                     /translation="MSGSQFIELFVGGLAIGCIYSLIALGFTMIIRATGVLHFAQGEV
                     VMLGAMFGVTAYHLLPLPFIALLMVGMVFGGLAAVAIELGVYRTLRVRRVPLMNIIIA
                     TVGMSILLQNTGQLVWGSEPIAYPKLFATHAYSIGPARVAPQLVWIIVLGILVMVLLQ
                     LFLAFTRTGRAMQAAAQIPETAQLMGINLTRITAYTYGIGGALGGGAGVLLGSLFYAS
                     FSMGFLPAMKAFVAATLGGLGSIGGAMVGGILFGLIETFAAISISTSYKDAVGMILLI
                     LILLAWPEGLVGLIRKGR"
     gene            complement(3020..>3425)
                     /locus_tag="VIY07_10525"
     CDS             complement(3020..>3425)
                     /locus_tag="VIY07_10525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382224.1"
                     /translation="KAHYLSDATGYIQGYLVAGARPEWLATSQGKDIATRWLRATMKG
                     RDVAEKDFNAVAAYAATKLSLSEKATKDQWDTNTRPMAIDKVYYDDFCSLSRWAQKEK
                     ATEDKIDFNKLTWGEGLRAIDPKLVDPPPPPC"
BASE COUNT          729 a         1025 c         1025 g          646 t
ORIGIN      
        1 agatggtctt caaggtcgtc gtcttgcctg cgccgtttcc accgatcaag gtgatgatct
       61 cggccttatt gatcgtcagc gacacgtcgc gcaaggctgc gacctcacca tagctgaccg
      121 cgagccgctc gacctcaagc atgggcgact atcctttcct cgaagccggc gcggccgaga
      181 taggcttcga tcacgctttt gttggcgcgt atctcggtcg gggtcccttc ggcgagtttc
      241 tgtccataat tgaggaccgt gatgcgcgag caggcggcca tgatcacgtc catgtggtgt
      301 tcaacgagca ccaccgttac accctgcgcg ttaatccgcc ggattagtgc gacaagcgct
      361 tctgcctctg tcggattcag gcccgcggcc ggttcgtcaa gcagtagaag cgtcgggcgt
      421 gcgacgatcg cgcgggcaat ctccagcagg cgccgatggc cgtaggcaag tgaggaggcc
      481 ggacggccgg cttggtcggc gagaccgacg gtttcgagcg ccgttaggct gtcccgatgc
      541 atcatctctt cctcgcggcg ctgcctgcgg gtcgcaagga ttgcttcgac cacgccgctc
      601 gttccgttag tgtggaggcc gatcatgacg ttctgcagca cggtcagttc ggcgaataac
      661 tttaggttct ggaaggtgcg acggacccct cgcgccgcga gacgatgcgc cggctcgccg
      721 gttatatcct gttcgacgag cgtcatcctt cccgatgtgg gcgtcgtcaa gccgctgatg
      781 agattaagcg tcgtggtttt gccggcacca ttcggtccga tcagaccgcg gatttcgccc
      841 ccttcaacat tcctcgaaac tgagtcgacg gccgtaacgc cgccaaatcg gcgggtgagc
      901 tggtcgagcg cgaggagcgc tgtcatcggc ggctccaacg cggagcggct acagtatcag
      961 cctgcgagat cggaccgctc gctgtgtccg attgcggccg caaccgaagc aggcgcatcg
     1021 cgagtgccgc cgacagtccg gcaagtcccc tgtggccgag tcccatgaag acgaccaaca
     1081 tcgcaccgaa aatgaccatg cggtactcgt cgagaacgcg cagatattca ggcagcagtg
     1141 taatgacgaa agccccgacg atggcgccgg caaggctgcc gatgccgccg acggtgacca
     1201 tgagcagaac ttcaatcgac ttccagaagg tgaaatcgtt cggattcagg taatgcgcat
     1261 gatgagcgaa gagggagccg gcaaatccgg ttatgacagc ggcgacgaca aacgcctggc
     1321 tcttgtagta ggtgacattg ataccgcttg cgcgcgccgc gtcctcatcc agcatgatcg
     1381 cttgcagcgc acgaccgaac cggctcggga gcagcctatg gagcgtaacg aaaaccgcca
     1441 ccagaacggc gaggcaaagt aagtagttac cggtctcggt tttgagaacc caggggccca
     1501 gactcggcga tgggatgtta agaaggccaa acgagccgcc ggtgagccat tcctcgttca
     1561 gaaagacgag gtgggcgatg atcgaaaagc cgagcgtggc aactccgagg tagaccccgc
     1621 gcaagcgcgt gatgggtacg agcgtgaggc tcgcaattcc cgccagcaat cccgccgcga
     1681 tgaacgcgat ctcgaacggc accttatagg tcgtggtgag aatggccgac gcgtaggcgc
     1741 ctatcccgag gaaagccgcc tgtccgatcg acaacaagcc tgcgaaaccg agcagcagct
     1801 gcagcgctag tgccgcgatg gcgaatatca tcgccaggct tacgatgtga accacatact
     1861 tttgcggata gacgaacggt aatgcgatga agatcgccag caccacgatc cgggcggtcc
     1921 acagataagc ggaaggaaat tctgacttga acaccgccgc gttacctccc tttccggatc
     1981 agacctacca ggccttcggg ccaggcaaga aggataagaa tgagaaggat cattccgaca
     2041 gcgtccttgt aggacgtgga aatggagatg gccgcgaaag tctcgatcaa tccgaacaag
     2101 atgccgccga ccatcgcgcc gccaatgctg ccgagcccgc ccagcgtcgc ggccacgaac
     2161 gccttcatcg ccgggaggaa acccatgctg aaggatgcgt agaaaagcga tccaagcaac
     2221 accccggcgc cgccgccgag tgcgccacca atcccgtagg tgtaggcagt gatgcgcgtg
     2281 agattgatgc ccatcaattg ggcagtctcc ggaatctgcg ccgccgcctg catcgcgcgt
     2341 cctgtgcgcg tgaaggcgag aaaaagctgt agcaacacca taacaagaat gccaagaaca
     2401 atgatccata cgagctgcgg cgcaacgcgg gccgggccga ttgaataggc atgcgtcgcg
     2461 aacagtttcg gataggcgat cggctccgat ccccatacca gttgacctgt attctgcagc
     2521 agaatggaca tgccgacggt cgcgatgatg atgttcatca ggggaacgcg gcgcactcgc
     2581 agtgtccggt agacgccgag ctcgatcgcc acggccgcga ggccgccgaa caccattccg
     2641 accatcagca gcgcgatgaa cggaagtggc aacaggtggt acgcggtgac gccaaacatc
     2701 gcgcccagca tcacaacctc gccttgtgcg aaatgcagca cgccggtcgc ccggatgatc
     2761 atcgtgaacc cgagcgctat gaggctgtag atgcagccga tcgcgagacc accgacaaag
     2821 agctcgataa attgcgagcc gctcatggca tgctccgttc ggtcttgaac tgtagcccag
     2881 tgcggtgtcc cttagggaaa cgtcaccctg aaatcactcc gcactacacc cggtcccaca
     2941 cctgaattgc cgctccttgc gagttccggc aaacaacatg ccgggtgggc ccggcatgtt
     3001 ttcgctatct aggtcgcact cagcagggcg ggggaggagg gtcgaccagt ttggggtcaa
     3061 tcgctctcag gccctcgccc cacgtcagct tattaaagtc gatcttgtct tctgtggcct
     3121 tttctttctg cgcccaccgg ctcagactgc agaaatcatc atagtagacc ttgtcgattg
     3181 ccattgggcg agtattggtg tcccactgat ctttggttgc cttttcactc aagctgagct
     3241 ttgtggccgc ataggcggca accgcattga aatccttttc tgcaacgtca cggcctttca
     3301 ttgtcgcgcg cagccagcgg gtcgcaatgt ctttgccctg ggacgttgcg agccattcag
     3361 gccgcgctcc cgcaacgaga taaccttgga tatagccggt tgcatcgctg aggtagtgtg
     3421 ctttc
//
LOCUS       DATDHO010000550         2819 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_372931, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000550 DATDHO010000000
VERSION     DATDHO010000550.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2819
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372931"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..902)
                     /locus_tag="VIY07_10530"
     CDS             complement(<1..902)
                     /locus_tag="VIY07_10530"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY6382225.1"
                     /translation="MKLPRRNFLHLAASAAALGSSLSAVGTTIATLSSGSALAAVTGA
                     DSKGRKVKFRDGVVVPAIGQGSWRLAEGRRPEAVEEEALRTGISLGMTLIDTAEIYAS
                     GKSEELIGRVIAGQRDRVFLVSKVWPTHVVGDGVARACEASLARLGTDYLDLYLLHWP
                     SWPPGGLIDLSVAVTSFESLRAAGKIRAWGVSNFDVREMEMLFELPNGDHCATNQVLY
                     NVGSRGIEYDLLPWCEKRGMPVMAYTPLGGNKVLHDPTLAKIGAAHGCSAAAVALAWA
                     IRSGNVIAIPASGSSAHVKENAIAL"
     gene            1274..2092
                     /locus_tag="VIY07_10535"
     CDS             1274..2092
                     /locus_tag="VIY07_10535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEY6382226.1"
                     /translation="MTKGGRFNTTTFAAFIGLMWVAGNASAAQCGSTAAGFEAWKQQF
                     AAEARGRGVSASTLAALGATSYATATIAADRGQRSFSLSLDQFLAKRGGATIVARGRG
                     LKQSHAALFASIQQRYGVPPGPLLAIWGMETAFGSQRGNQNTLSAVATLAYDCRRSAY
                     FTDQLNATLTLIDRGVLSASTRGSMHGEIGQTQFLPKSILNYGTGNLDVAANALNSTA
                     NFLKAHGWRAGAGYQPGEANFVAIQAWNAAPVYQRALALIGRQIDGGDDKSAGR"
     gene            2177..2614
                     /locus_tag="VIY07_10540"
     CDS             2177..2614
                     /locus_tag="VIY07_10540"
                     /inference="COORDINATES: protein motif:HMM:NF015669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HEY6382227.1"
                     /translation="MSKAERDLKNLSNQYWALLLLATMNTVACAQTTAENPVGGWLAE
                     SIRGGGVIDRLQTILEVGADGAISGTGGCNAMRGRATISGDTIVFSSIASTRKACSPA
                     VMDQESKFFAALNDTQTWRVDSVRRKLILIDGKGHSVVVFTRM"
BASE COUNT          605 a          833 c          834 g          547 t
ORIGIN      
        1 agcgcgatag cgttctcttt tacatgcgcc gacgagcccg acgcgggaat ggcgataacg
       61 ttaccgctgc ggatggccca agccagggcg acggcggccg ccgagcaacc gtgtgctgca
      121 ccaatttttg caagcgtggg gtcatgtaac accttgttgc cgccgagcgg agtgtaggcc
      181 atgaccggca taccgcgctt ctcgcaccat ggtagcaagt catactcaat gccgcggctg
      241 ccgacgttat aaagtacctg attggtcgcg cagtggtccc catttgggag ttcaaagagc
      301 atttccattt cgcggacatc gaagttggac acgccccagg cacgaatctt cccggccgcg
      361 cgcaggcttt cgaatgacgt cacagcgacc gagaggtcaa tgagaccgcc gggtggccag
      421 gaaggccagt gcagcaggta gagatcgaga taatcagtgc cgagacgggc taggctcgcc
      481 tcgcaagcac gggcgacgcc gtctcccacc acatgagtgg gccatacctt ggagactaag
      541 aaaacacggt cgcgttgacc agcaatcacg cggccaatta attcctcgga cttgccgctg
      601 gcgtatatct ccgccgtgtc gatcaaagtc atcccgagcg aaatgccagt gcgcagggct
      661 tcttcctcaa cagcttccgg acgtcttccc tccgcgagac gccaagagcc ctgaccaatt
      721 gccgggacga cgacgccgtc gcggaatttt accttacgtc ccttgctgtc cgcgccagtt
      781 accgcggcaa gagccgatcc acttgatagt gtggcaatgg ttgtgccgac cgcggagagg
      841 gacgagccga gtgccgctgc gctcgcagcc agatgcagaa aatttcggcg cggaagtttc
      901 acgacgatgc gtccttacga caccaaagct atcccaattc caatgacgcg tcacgatgtc
      961 cgctattggc cctaagcgga cattcctagt tgcgctgcat atgtccgctt ttgacccgac
     1021 gcggacatag accggttaga cattggacct cagtccaact cgacctcgaa atcaaaaacc
     1081 aacacagtcc gcagtggaat tccgcgggtg agcgctgcgt gaaattccgc gtcctcacgc
     1141 gcaagccggc tgatgaaact gcagcatcga gcctgcatcg ggggttcctg acacgagagg
     1201 cacgatcaca cctcatctca tgtcatctca tgcccgcgcg agtgccgtca tatgcattga
     1261 aagggagttc gaaatgacca agggtggacg cttcaacacg accacttttg cagcctttat
     1321 cgggctcatg tgggtggccg ggaacgcgag tgccgcgcag tgcggcagca cagctgcggg
     1381 ctttgaggca tggaagcagc agttcgccgc cgaggcgagg ggaaggggcg tgagcgcttc
     1441 aacgctcgca gccttggggg cgacgagcta tgcgaccgcg accatcgcag ctgaccgcgg
     1501 ccaaagaagt ttcagcctat cgctcgatca gtttctcgcc aaacgcggcg gtgcgaccat
     1561 tgtcgcgcgc ggacgtggac tcaagcaatc ccatgcagcg ctctttgcat caatccagca
     1621 gcgctatggc gtcccgccag ggccgctcct agccatttgg ggtatggaga cggcattcgg
     1681 aagccaacgc gggaatcaga atactctgtc ggccgtggct acactcgcct acgactgtcg
     1741 tcggtcggcc tattttaccg accaacttaa cgcaaccctg acgttgatcg atcgcggcgt
     1801 cctctcggca agcacgcggg gctcgatgca cggtgaaatc ggccagacac agttcttgcc
     1861 caagagcatc ttgaattacg gcactggaaa tctcgacgtc gcggccaacg cgctaaactc
     1921 aacagcaaat ttccttaaag ctcatggctg gcgcgccggc gcgggatacc agcccgggga
     1981 agccaatttc gtggcgatcc aggcatggaa cgcggctccg gtttatcagc gcgcccttgc
     2041 gcttattggc cgacagattg acggaggaga tgacaagtcc gcggggcgct gagtctcggt
     2101 cgccgcggtt ctttcggcgg aaaggttgcc gcaagacggc ctttcttttc tctcgggcct
     2161 atgtccatgt gggcttgtga gcaaagcgga gcgcgacttg aaaaacctaa gcaaccaata
     2221 ctgggcccta ctattgttgg cgacgatgaa cactgtcgca tgcgcgcaga cgacagctga
     2281 gaatcctgtt ggtggttggc tggcggaaag tatccgcggt ggcggcgtta tcgatcgcct
     2341 tcaaacgatc cttgaggtgg gcgctgacgg ggccatctcc gggacgggtg gctgcaatgc
     2401 gatgcgcggc agggcgacaa tctcgggcga cacgatcgtg tttagctcga tcgcaagtac
     2461 caggaaggca tgctctcctg cggtcatgga tcaggaaagc aagtttttcg ctgcgctcaa
     2521 cgacacccaa acctggcgcg tcgattcggt ccgccgcaaa ctcattctga tcgatggaaa
     2581 agggcattcc gtagtagtct ttacgcggat gtgagtaagt cccggctaga ccatcgatct
     2641 caacatcttg cggacgggca tcctcatgtc cgcctatgac ccctcagcgg acatcggcgc
     2701 attagttcgg cccaagcgct ttcgcgagag tggccgaggg cagttcgcca aagcgtcgaa
     2761 agtacagtga cgcaaatcgc ccgaaatggg tgaacccata atcggatgcc acaccggta
//
LOCUS       DATDHO010000551         1594 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_372982, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000551 DATDHO010000000
VERSION     DATDHO010000551.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372982"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /gene="rplB"
                     /locus_tag="VIY07_10545"
     CDS             complement(<1..767)
                     /gene="rplB"
                     /locus_tag="VIY07_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEY6382228.1"
                     /translation="MALKTYNPVTPGQRQLVIVDRSTLHKGPPVKSLTEGQNSTGGRN
                     NHGRITSRFRGGGHKQAYRRIDFRRRKFDVPATVERLEYDPNRTGFIALIKYQDGELA
                     YILAPQRLSPGDSVIASEHADVKPGNAMPIANIPVGTIVHNVEIKVGKGGQIARSAGS
                     YAQIVGRDQDYVILRLNTSEQRLVHGRCMATVGAVSNPDNMNTAIGKAGRQRWKGRMP
                     HNRGITMNPVDHPHGGRTKGGKHWTTPWGFPTKGKKTR"
     gene            complement(781..1080)
                     /locus_tag="VIY07_10550"
     CDS             complement(781..1080)
                     /locus_tag="VIY07_10550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEY6382229.1"
                     /translation="MSTSDPRHYDVIIAPVITEKATMSSEHNKVTFKVAKAATKPQIK
                     EAVEKLFDVKVKSVNTLTRPGKRKAFRNRIGQQSDVKRAIVTLEEGHRIDVTTGL"
     gene            complement(1077..>1594)
                     /gene="rplD"
                     /locus_tag="VIY07_10555"
     CDS             complement(1077..>1594)
                     /gene="rplD"
                     /locus_tag="VIY07_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEY6382230.1"
                     /translation="VNWQLAKRQRGTHKTKGRSEIWRTGKKMYAQKGTGGARHGPASV
                     PQFRGGGRAFGPVVRSHAIDLPKKVRALALKHALSSKAKDGGIILLDKATLKDAKTKA
                     LAKQFGKLGLENALIIDGAEIEANFRTAARNIPNIDVLPVQGINVYDILRRKTLVLTK
                     AALDALEARFK"
BASE COUNT          251 a          494 c          486 g          363 t
ORIGIN      
        1 cgggtcttct tgcccttggt cgggaagccc catggtgtgg tccaatgctt gccgcccttg
       61 gtgcggccgc catgcgggtg gtcgaccgga ttcatcgtga tgccgcggtt atgcggcata
      121 cggcccttcc agcgttgccg gccagccttc ccgatcgcgg tattcatgtt gtccgggttg
      181 gaaacggcgc caacggtcgc catgcatcga ccatgcacca ggcgctgctc cgatgtgtta
      241 agccgcagga tcacgtagtc ctgatcgcgt ccgacgatct gcgcatagct gccggccgag
      301 cgcgcgatct gaccgccctt cccgaccttg atctcgacat tatggacgat ggttccgacc
      361 ggaatattcg cgatcggcat ggcattgccc ggctttacgt ccgcgtgctc ggacgcgatc
      421 acggaatcgc caggggagag acgctgcggc gccaggatat aggctagctc gccgtcctga
      481 tacttgatca gcgcgatgaa gccggtgcgg ttcgggtcat attccaaacg ttcgacggtt
      541 gcaggcacat cgaatttcct gcggcggaaa tcgatccgcc gataggcctg cttgtgaccg
      601 ccaccgcgga aacgcgaggt gatgcggcca tgattattgc ggcctccggt cgaattctgc
      661 ccctcggtga gcgacttcac cggtgggcct ttatggaggg tcgagcggtc gacgatcacc
      721 agctggcgct ggcccggcgt caccggattg tatgttttca acgccatcgc aacgctctcc
      781 ttacaatccc gtggtcacgt cgatcctgtg accctcttcg agcgtcacga tcgcacgctt
      841 gacgtcggac tgttgcccga tcctgttgcg gaacgccttg cgcttgcccg gacgcgtgag
      901 cgtgttgacg ctcttgacct tcacgtcgaa cagcttctcc accgcctcct tgatctgcgg
      961 cttggtggca gccttggcca ccttgaacgt gaccttgttg tgctcagacg acatggtcgc
     1021 cttttcagtg atcaccggag cgatgatgac gtcgtagtgg cgcggatcgc tggtgctcat
     1081 ttgaatcgcg cctccagcgc atcgagcgcg gccttggtca gcaccaaagt cttgcgccgc
     1141 aggatgtcgt aaacgtttat gccctgaacc ggcaggacat cgatatttgg aatattgcgc
     1201 gccgcggtcc ggaaattagc ttcgatctcg gcgccgtcga tgatcagcgc gttttcaagc
     1261 ccgagcttgc cgaattgctt tgccagggcc ttggtcttgg catccttcag cgttgccttg
     1321 tcgagcaaaa tgatgccgcc gtccttggcc ttcgaggaga gcgcgtgctt gagtgcaagc
     1381 gcgcgcactt ttttcggcag atcgatggcg tgactgcgca ccaccggacc aaacgcgcgc
     1441 ccgccgccac ggaattgggg gacgctcgca gggccgtgac gggcgccgcc tgttcctttc
     1501 tgcgcataca tcttcttgcc ggtgcgccag atttcgctgc ggcccttggt cttgtgggtg
     1561 ccgcgctgac gcttggcgag ctgccagttc acgc
//
LOCUS       DATDHO010000552         1792 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_72631, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000552 DATDHO010000000
VERSION     DATDHO010000552.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_72631"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..183)
                     /locus_tag="VIY07_10560"
                     /pseudo
     CDS             complement(1..183)
                     /locus_tag="VIY07_10560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(532..1617)
                     /locus_tag="VIY07_10565"
     CDS             complement(532..1617)
                     /locus_tag="VIY07_10565"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6382231.1"
                     /translation="MSISETMHTGPRLAFVDCTISADVGVGAGGGSGQAPAPGRRQVV
                     VSGKRVKTIDVHAHCIVPEAAQLINHPLEAPGLLWSNLGDRLAQMDRTGVDVEALSIN
                     PYWYRAERDAVTEVIRVQNEALAAFCAAQPERFVAFATAALQYPDLAAEQVEHAVKTL
                     GFRGVGVAGSVAGEELAHPKFHPFWAACEALGVLVFMHPLGTRELEPSGRLAGSGLLT
                     NTIGNPLETTIALSHLIFEGTLDRFPGLKICAAHGGGFLPSYANRSDAVITTFPNRVG
                     PLPKKKPTEYLRGGQLYFDSIMFTGEGMRHLIAEAGIDHVVLGTDYPFPWNTAPVDHV
                     LVIPGLSDEDRIKILGGTAAKLLGIEG"
BASE COUNT          340 a          550 c          567 g          335 t
ORIGIN      
        1 gcgcggcggg gcgcgggttg gcaggcccag atggctgagg atcttgacga tcaccggcgg
       61 atcttcgatc gcggcccttc gacgaggctc aggacaggcg atgatcttca aggcgccgcc
      121 gcagttcggg cagtgttcca catcgatatc gaagacccgt ttgagcagcc gggcccagct
      181 catgcgcggc ggtgcgccct gtgcgtgaga gccctcgctt gaggtctcgg tagcgcgctc
      241 tggcggggcg ggaacgattt gactgcgcaa cttcgcgttg ggcgccagtg atcggggtct
      301 ccccttgcgc acctccatac aaggcactgg taaccaacac cccaacaagg ccgggtcaag
      361 cgccagattg tgaggctgtt ttttcgggcc atactttgtg cccttcctct tccacgtgtt
      421 agagtcgccc catagaagga aacacatgtg cagagcatca gcattgtccc aacagctcgt
      481 cagtgagaag aagggtaaag cgtgttgggt agtccgccag gcgataattg cctacccttc
      541 aatccccagg agtttcgccg ccgtcccccc gagaatcttg atccggtcct cgtcactgag
      601 cccgggaatc accaagacat ggtcgacggg ggcagtgttc catgggaacg ggtaatcggt
      661 cccaaggacc acatgatcga tccctgcctc ggcgatcagg tgccgcatgc cctcgccggt
      721 gaacatgatc gaatcgaaat agagctgtcc gcctcggaga tattcggtcg gcttcttctt
      781 cggcaagggc ccaacccggt tcgggaaagt cgtgattacc gcgtccgagc gattggcgta
      841 ggacggcaag aacccgccac catgcgcggc gcagattttc aggcccggga agcggtcgag
      901 cgtcccttca aagatcagat gcgacaaggc gatcgtggtt tcgagggggt tgccaatggt
      961 gttcgtcagg agcccacttc cggccaagcg gccactcggt tccaattcgc gggtgccgag
     1021 cgggtgcatg aagacgagca cccccagcgc ttcgcaggcg gcccagaacg ggtggaattt
     1081 cggatgggcg agttcctcac cagcgacgct gccggccacg ccgacaccgc ggaagccaag
     1141 cgtcttgacc gcgtgctcaa cctgttcggc ggcgaggtca ggatattgca aggccgcggt
     1201 cgcaaaggca acgaaccgct ccggctgcgc ggcgcagaag gcggcgaggg cctcgttctg
     1261 gacccggatg acttcggtga cggcatcgcg ttcggcgcgg taccagtagg gattgatgct
     1321 gagcgcttcg acatcgacgc cggtacgatc catctgcgcc aaccggtcgc caagattgga
     1381 ccacaggagc cccggcgctt cgagcgggtg attgatgagc tgcgccgcct ctgggacaat
     1441 gcaatgcgca tgcacgtcaa tggtcttgac tcgcttgcca ctcacgacga cctggcggcg
     1501 accaggcgcc ggcgcctgcc ccgaaccgcc gcctgccccg acaccgacgt cggcgctgat
     1561 cgtacagtcg acaaaggcga gacgagggcc agtatgcatg gtttcactga tagacatgtc
     1621 cgttcctttt gtgctttatg ccagttgtaa tgaggagtcc cacagcgcaa aagcttgcaa
     1681 cgctgccgat gcctgtccaa tgctccgtac cggagtggga gggaggtatc ttcccgcacc
     1741 tcgcgatgcc cacgcgaggc ctcaaatgcg cacggggctt ttggcccgtc tt
//
LOCUS       DATDHO010000553         3305 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_373312, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000553 DATDHO010000000
VERSION     DATDHO010000553.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3305
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_373312"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..422)
                     /gene="metX"
                     /locus_tag="VIY07_10570"
     CDS             complement(<1..422)
                     /gene="metX"
                     /locus_tag="VIY07_10570"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443124.1"
                     /note="Catalyzes the conversion of acetyl-CoA and
                     L-homoserine to CoA and O-acetyl-L-homoserine; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEY6382232.1"
                     /translation="MGDAMTSMHDLADAPREADQPRDSLIARFGADKPLKLDAGVELA
                     PFQIAYKTYGTLNAQRSNAVLICHALTGDQHVASLHPVTGKSGWWDTMVGPGRPIDTE
                     RYFVICPNVVGACMGTTGPSSTDPKTGKPWGLDFPVIT"
     gene            563..1411
                     /locus_tag="VIY07_10575"
     CDS             563..1411
                     /locus_tag="VIY07_10575"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEY6382233.1"
                     /translation="MGKPTEPPALADLRKEIDRIDEAMHQLLIERGEIIDRLIAVKRS
                     QDTGTSAFRPAREATMMRRLVDRHKGILPLDTVESIWRVIISTFTYVQAPFSVHADLT
                     AGDALMRDSARFHFGFTVPFVPHMGAAGVVAAVSASQGDLGLVPAFDIASAGAWWSAL
                     EFDAAPKIIARLPFVERPDHPAALPVFVICRVAPDAMATGAEVWSVRVSGWGVGPARA
                     LTALADFIAVPDHAFDGAALLITLPKETSLQSISAALVNAGATVRSAALVGSHATRYT
                     VAAEKA"
     gene            1429..2532
                     /gene="hisC"
                     /locus_tag="VIY07_10580"
     CDS             1429..2532
                     /gene="hisC"
                     /locus_tag="VIY07_10580"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEY6382234.1"
                     /translation="MTANRPHPRPGVLDIAPYVPGKSTAAGVAKVFKLSSNETPLGPS
                     PHALAAYRAVGEHLEDYPDGPASALREAIGAAYGLDPDRIVCGAGSDDLLNLLARAYL
                     SDGDEAIYTTHGFLVYPIATMGTGAKAIAAQETNFTADVDTILAAVTPRTKVVFLANP
                     NNPTGTYIPFDEVKRLHKGLPQTVLLVLDAAYAEYVQRNDYESGIELVATTDNVVMTR
                     TFSKIYGLAALRLGWMYGPAHVVDAVHRIRGPFNVNGPAIAAGIAAIGDTVHVRRSRA
                     HNTRWLAWLTEEIGKLGLSVTPSAANFVLIHFPETKGRTARDADAFLTKRGLILRQVA
                     AYKLPNALRMSVGTEEANRLVVQALKEFLGNPA"
     gene            2529..>3305
                     /locus_tag="VIY07_10585"
     CDS             2529..>3305
                     /locus_tag="VIY07_10585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate/arogenate dehydrogenase family
                     protein"
                     /protein_id="HEY6382235.1"
                     /translation="MSKPAPLFNRLAIIGVGLIGSSIARAARAQGAARTIVATARSPR
                     TRRRVAELGLADQVVESNAAAVEGADLVIVCIPVGACAAVAQEIGSHLAAGAIVSDVG
                     SVKEAVVRDMAPHLPKGVHFVPAHPVAGTEYSGPDAGFAELFVNRWCILTPAEDADPK
                     AVEKLAAFWRLLGANVEKMSADHHDLVLAITSHLPHLIAYTIVGTADELQSVTRSEVL
                     KFSAGGFRDFTRIAASDPTMWRDVFLANKDAVLEMLGRFNE"
BASE COUNT          599 a         1038 c         1002 g          666 t
ORIGIN      
        1 atggtgatga cagggaagtc caggccccag ggcttgcccg ttttcgggtc agtcgaagac
       61 ggccccgtcg ttcccatgca ggcgccgacg acattcggac agatcacgaa atagcgctcg
      121 gtatcgatgg gcctgcccgg cccgaccatt gtgtcccacc aacctgattt tccggtcacc
      181 ggatgcaagc ttgcaacgtg ctggtcgccg gtcagagcat ggcagatcag taccgcgttc
      241 gaacgctgcg cgttgagcgt cccatatgtc ttataggcaa tctggaatgg cgcgagctcc
      301 acgccggcgt cgagcttgag cggcttgtcg gctccgaacc gggcgatcag cgagtcgcgc
      361 ggctggtccg cttcgcgcgg cgcatcagcc aaatcgtgca tgctcgtcat ggcatcgccc
      421 atgtcaaatc gcccatagca cttggtacgc tcccggcact acccgtatcg gggatcgatt
      481 agcagaggtt tactgtcaac gtaaaaggtt gcagtcaatg ttttctttga tttcagcctc
      541 cggcccacct atcaatgccg ggatgggaaa accgacagaa ccacccgcgc tggccgatct
      601 acgcaaggag atcgaccgta tcgacgaggc gatgcaccag cttctgatcg aacgcggaga
      661 gatcatcgac cgcctgatcg cggtcaaacg cagccaggac actggcacgt cggcattccg
      721 gcccgcccgc gaagcaacga tgatgcgccg gctggtcgac cgtcacaaag ggatattgcc
      781 actcgatact gtcgagagca tctggcgggt tatcatttca acttttacct acgtgcaagc
      841 gccattttca gttcatgccg atttaacggc aggcgatgcg ctcatgcgcg actccgcgcg
      901 ttttcatttt ggcttcaccg ttccgttcgt tccgcacatg ggtgccgccg gcgtcgttgc
      961 agccgtatca gcgtctcagg gtgatctcgg ccttgtgccc gccttcgaca tcgcctcggc
     1021 tggggcgtgg tggagcgccc ttgagttcga tgccgctccc aaaatcattg cgcggctgcc
     1081 gttcgtcgag cgcccggacc accctgctgc cttgccggta ttcgtgatct gccgcgttgc
     1141 gcccgacgcc atggcgaccg gagccgaggt gtggagcgtg cgcgtctccg gctggggcgt
     1201 aggtcctgca cgggcgctga cggcgcttgc tgacttcatc gccgtgccag accatgcttt
     1261 cgatggagcc gccctgctga taacgctgcc gaaggaaacc agcctccaat cgatcagcgc
     1321 ggcgttggtt aatgccggcg ccaccgtccg ctcggcggcc ctcgtcggaa gccacgcaac
     1381 ccgctatacg gttgccgccg agaaggcctg actgttcgga caccttcgat gactgcgaac
     1441 cgcccgcacc cgcgcccagg cgtgctcgac attgcccctt atgttccggg caagagcacg
     1501 gcagcaggcg tggccaaagt gttcaagctc tcctccaacg aaacgccgtt ggggccgagc
     1561 ccgcatgcgc tcgcagccta tcgcgcggtc ggcgagcacc ttgaggacta tcctgacgga
     1621 cctgcttcag cgttgcgcga ggcgattggc gccgcgtatg ggctcgatcc cgatcgcatc
     1681 gtctgcggtg ccggctccga tgatctgctg aacctgcttg cgcgcgccta tctcagcgac
     1741 ggcgacgaag cgatttatac gacgcacggc tttttggtct acccgattgc gacaatgggc
     1801 acaggcgcga aggcaattgc cgcgcaggaa acgaacttca cggctgatgt cgacaccatc
     1861 cttgcagcag tgacgccaag gacgaaggtc gtatttctgg ccaacccgaa caatcctacc
     1921 ggcacttaca tcccgttcga tgaagtcaag cggctgcaca aaggattgcc tcaaaccgta
     1981 ctgcttgtgc tcgatgccgc gtacgccgag tacgtgcagc gcaatgatta cgagtccggg
     2041 attgaattgg tggcaaccac ggacaacgtg gtgatgacgc gcacattttc caaaatctat
     2101 ggacttgcag cgttgcgcct tggctggatg tatggaccgg cgcacgtggt cgacgccgtc
     2161 catcgaattc gcggaccatt caacgtgaat ggtcccgcca tcgccgcggg tattgccgcc
     2221 atcggtgaca ccgtccatgt gcggcgctcg cgcgcgcaca atacgcgctg gcttgcctgg
     2281 ttgactgaag agatcggcaa gctcggcctg agcgtgaccc cgagtgcggc gaatttcgtg
     2341 ctgattcatt tccccgaaac gaagggcagg acggcccgcg atgcggacgc gttcctcacc
     2401 aaacgcggcc tgatcctgcg gcaggtcgcg gcttacaagc tgcccaatgc cttgcgaatg
     2461 agcgtcggca ccgaagaggc caatcgcctc gtggtgcagg cactcaagga atttctgggg
     2521 aacccggcat gagcaaaccg gctccgctgt tcaatcgcct ggccataatc ggtgtcggcc
     2581 ttatcgggtc ttcgatcgcg cgcgccgcgc gtgcccaggg tgcggcgcgg acgattgtcg
     2641 cgaccgcgcg ctcgccgcgc acccgtcgac gcgttgccga gcttggcctt gccgatcagg
     2701 ttgttgaaag caacgccgct gcggtcgaag gcgccgatct ggtcattgtc tgcatcccgg
     2761 tcggcgcctg cgctgcggtc gcgcaggaga ttggttctca tctcgccgcc ggtgcaatcg
     2821 tttcagatgt cgggtcggta aaggaggcgg tcgtacggga tatggcccct cacctgccca
     2881 agggtgtcca tttcgtgccg gctcacccgg tcgccggaac tgaatattcg ggtccggatg
     2941 ccggctttgc cgagctcttc gtcaatcggt ggtgcatcct gacgccagcg gaggacgccg
     3001 accccaaggc ggtcgagaaa ctggcggcgt tctggcgcct gttgggcgcc aatgtggaaa
     3061 agatgtcggc cgaccaccat gatctggtgc tggccatcac aagtcatctg ccccatctga
     3121 ttgcctacac catcgtcggc acggcagacg aactgcaaag cgtgacgcgt tcggaagtgt
     3181 tgaaattctc cgccggcggc ttccgtgatt tcacccgcat cgccgcttcc gatccgacga
     3241 tgtggcgcga cgtgtttctc gccaacaagg atgcagtttt ggaaatgctc ggtcgattca
     3301 atgaa
//
LOCUS       DATDHO010000554         4574 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_26661, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000554 DATDHO010000000
VERSION     DATDHO010000554.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4574
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_26661"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /locus_tag="VIY07_10590"
     CDS             complement(<1..619)
                     /locus_tag="VIY07_10590"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6382236.1"
                     /translation="MNASLPGPLNDNPNLDRWVAFPSPGKVTILTGRVELGQGVLTAM
                     AQIAADELDVAMERITVRSGDTEKAPNEGYTAGSQSIQFGGVALRQACAEVRALFLDQ
                     AGKVLGCKANELSIRDGRFHRNGASTGQDYWTLSSAIDLTCRATGVAARKAFADLKSV
                     GVSTPRLDLPKKVFGDSVFIHDMRLDGTIHARVVRQPNRGAPIASI"
     gene            complement(616..1101)
                     /locus_tag="VIY07_10595"
     CDS             complement(616..1101)
                     /locus_tag="VIY07_10595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY6382237.1"
                     /translation="MSKKFEFSVNGSAVSVSLDNEETPLLDVLRNSLGLKGTRFGCGL
                     EQCGCCIVLIDGAPEKCCTKPVWSVAGKEIFTVEGLGDAARPHPLQQAFLDEQAGQCG
                     YCLSGILISAKALLDKNPKPSRVEIAQALDGNICRCGSHNRILRAVEKAAAFMRAGAK
                     R"
     gene            complement(1111..1893)
                     /locus_tag="VIY07_10600"
     CDS             complement(1111..1893)
                     /locus_tag="VIY07_10600"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019674 - NAD metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HEY6382238.1"
                     /translation="MSQQLKPFQHIALVASPTPEARQACARLEKRYGNADPAKADVIV
                     ALGGDGLMLQTLHKFMNSGKPIYGMHRGTVGFLMNEFSEEKLGERLANAHITVIHPLV
                     MRARDAEGRVHEHRAINEVSLFRQSAQAAHLRILIDGQERLSELIADGVLVATPAGST
                     AYNLSVQGPIIPINAPLLALTPISPFRPRRWRGALLPNKANVTIEVMDADKRSVAAVA
                     DHDEVRSVNSVDIAMDHSISINMLFDPGHNLDERILREQFGF"
     gene            1909..2229
                     /gene="cutA"
                     /locus_tag="VIY07_10605"
     CDS             1909..2229
                     /gene="cutA"
                     /locus_tag="VIY07_10605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010038 - response to metal ion [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="divalent-cation tolerance protein CutA"
                     /protein_id="HEY6382239.1"
                     /translation="MERAVLVYTTWPSIVEAERAGRSIVERRLAACINILPGMISHYW
                     WEGKIERAEEVVMIIKSRASMAEPLRETVKQLHSYTIPAFMVLPVEHVDPEYHAWIVR
                     ETSQ"
     gene            complement(2284..2841)
                     /locus_tag="VIY07_10610"
     CDS             complement(2284..2841)
                     /locus_tag="VIY07_10610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6382240.1"
                     /translation="MTLTQVLRRAGVFAAAALLVTAVSIKPVTVFAMGTDSPPPSDDG
                     KKKKKKKDQSVIEQKEQQLAQEKFLRDYRAARQLILDGQYEAGITAMHALGRDDHPDV
                     ANYIGYANRKMGDYDQSKIWYEAALKADPSHVRTWSYYGMWHMEQGNRLKALDNLQKV
                     QLICGNTSCEEYRQLKDVIDGKATY"
     regulatory      2996..3219
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3418..>4574
                     /locus_tag="VIY07_10615"
     CDS             3418..>4574
                     /locus_tag="VIY07_10615"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY6382241.1"
                     /translation="MGKGHIARLAGAALALVTLAASSSAQIVLPQIDVSWTRLNSSMV
                     GTSTSIISSQDIERSPAQNLPDILSQQTGIQIQHLLSSTNGSRDAVDLRGFGAFAQSN
                     VLILVNGRRFQDFDLQGFDFSSIPLNSIERIEITRGNSGTVLYGDGAIGGVINIVLKK
                     GSSTAAFNRVEAFAGSFEYWEGRASAAATSGPWSIGAFGNAISSAGYRVNSALRQRNI
                     NSTLNYATDNLGAYLTVAGDRQFQGLPAGLNNLPGNFPFTLDTPWQSNTPLDWGKKQG
                     INFATGFNTTLTPGVELIVDGSVRRKFQQAQFFNYLDPVTFLYNLSAASPMNYVDTVM
                     TTSSVTPRVDVTHRLFGLPNRLFAGIDFYNTQYDSDRPTAPGLVPVHRYDIR"
BASE COUNT          931 a         1316 c         1361 g          966 t
ORIGIN      
        1 cgattgaggc aatgggtgca ccacggttgg gctgccggac aacgcgggcg tgaatcgttc
       61 cgtcgagacg catgtcgtga atgaaaacac tgtcgccgaa tacttttttc ggcaggtcga
      121 ggcgaggggt gctgacgccg acgcttttca gatcggcgaa tgccttgcgc gcggcaaccc
      181 cggttgccct gcatgtgaga tcgatcgcgc tcgacaatgt ccagtagtcc tgccccgtcg
      241 atgcgccgtt gcgatgaaag cggccatcgc gaatggataa ttcattagcc ttgcagccca
      301 atacctttcc ggcctggtca aggaatagcg cgcgaacctc ggcgcaggct tgtcgcaggg
      361 ccacgccccc gaactgaatc gattggctgc ccgccgtgta gccctcgttt ggcgctttct
      421 cggtgtcgcc ggaacggact gtgatgcgct ccatggcgac gtcgagttcg tcggcggcta
      481 tttgcgccat cgcagtgagc acgccctgac caagttcgac ccggccggtg agaatcgtca
      541 cctttcctgg cgacgggaag gcaacccagc ggtcgagatt gggattgtca ttgagcggtc
      601 ccggaagaga agcattcatc gtttcgcccc cgcgcgcatg aaggccgcgg ccttttccac
      661 cgcgcgcagg atgcggttat gagaaccgca tcggcagata ttgccatcga gcgcctgcgc
      721 aatttccacg cgcgacggct tcggattctt gtccagcagg gccttcgccg agatcaggat
      781 gccggagagg caatatccgc attggccggc ctgctcgtcg agaaaggctt gttgcagcgg
      841 atgagggcga gcggcgtcgc caaggccttc gaccgtgaag atctcttttc ctgcgacgct
      901 ccagacgggc ttggtgcagc atttttccgg agcgccgtcg atcagcacga tgcagcaacc
      961 gcactgctca agcccgcagc cgaaacgcgt ccctttcagt ccgagcgagt ttcgtaatac
     1021 gtcgagaaga ggggtctcct cattgtcgag cgatacgctg acagcgctgc cgttgacaga
     1081 aaactcgaat tttttggaca cgcatgctcc tcagaaaccg aattgctcgc gcagaatgcg
     1141 ttcatcgaga ttgtgacccg ggtcgaacag catattgatc gagatactgt ggtccatggc
     1201 aatgtccacg ctgttcacgg agcggacttc atcatgatcg gcgaccgctg caactgagcg
     1261 tttgtccgca tccatcactt cgatcgtgac gtttgccttg ttcggcaaca gtgcgccacg
     1321 ccagcggcga ggccgaaaag ggctgatcgg ggtgagggcg agcagaggtg cattgatcgg
     1381 aatgatcggc ccctggaccg acagattgta ggcggtcgag ccggccggag ttgccacgag
     1441 tacgccgtcg gcgatgagtt cggaaagcct ttcctggccg tcgatcaata tgcgcagatg
     1501 cgccgcctgc gcgctctggc gaaacaacga gacctcgtta atggctcgat gctcgtggac
     1561 gcgcccttcc gcatcgcgtg cgcgcatgac cagggggtga ataaccgtga tatgtgcgtt
     1621 tgcgagccgc tcacccagct tttcctcgga aaattcgttc atgaggaacc cgacagtgcc
     1681 gcgatgcatg ccgtagatcg gcttgccgga attcatgaac ttgtgcaggg tctgcaacat
     1741 caatccgtcg ccgcccagcg cgacgatcac atcggctttt gccggatcgg cattgccata
     1801 gcgcttttcc agccgcgcgc aggcctggcg cgcttccggc gtcgggctgg cgaccagggc
     1861 aatgtgctga aaaggcttga gctgctggct cattcaaggg acctgccaat ggaacgtgcg
     1921 gtgctcgtct atacgacttg gccatcgatt gtcgaggcgg agcgggcagg gcggtcgatc
     1981 gtggagcggc ggctcgcagc ttgcatcaat atcctgcccg gcatgatttc gcattactgg
     2041 tgggagggaa aaatcgagcg ggccgaggag gtcgtgatga tcatcaaaag ccgggcttcg
     2101 atggccgaac cgttaaggga gacagttaaa cagcttcact cctacaccat tccggccttc
     2161 atggttttgc cggtcgaaca tgtcgatcct gaataccacg cctggatcgt gcgagagacg
     2221 tcccaatagc atcatgcccg gcgcttggcc gggcatgatt cctcggatcc gtagggtcac
     2281 tggctagtac gtcgccttgc cgtcgatcac gtccttgagc tggcgatact cctcgcagct
     2341 cgtgttgcca cagatcagct ggactttctg caagttgtcg agcgctttga gccgattgcc
     2401 ttgctccatg tgccacatgc cgtaatagga ccaggtgcgc acatggcttg gatcggcctt
     2461 gagggcagcc tcgtaccaga tcttggactg gtcgtagtcg cccatcttgc ggtttgcgta
     2521 gccgatatag ttcgcgacat cggggtgatc atcacgaccg agcgcatgca tggcggtaat
     2581 gccggcctcg tactggccgt caagaatgag ctggcgggca gccctgtagt cgcggaggaa
     2641 tttctcctgg gccagctgct gctccttttg ctcaatgaca ctctggtcct tctttttctt
     2701 tttctttttg ccgtcgtcgg agggcggtgg actatcggtg cccattgcga acactgtcac
     2761 gggtttgatg ctgacggcgg tcacgagcag ggcagcggca gcgaacacac cggcgcgacg
     2821 aaggacttgg gtcaaggtca tggcggaagc tctcctgcaa aaggccgact aaccaaggcg
     2881 gcggatacga caaaaacaat ctgcggttgg agtctagtcc ctgcaaccga ggaataacac
     2941 gatcgtgaag cggtgttttt ggcgatgcgc cgcttgacta agtctaaggt tcaagagaac
     3001 attttatggt gctggttccc cgggcgattc cggggacgaa agagggaaca cggacacttc
     3061 gaatccgagc aacacgaaat tcgaagaagg ccgtggctgc ccccgcaact gtgagcggcg
     3121 agcctaaggt ccaacacggc cactgggaaa ctgggaaggc cggaccaaaa aggcgtagac
     3181 ccgcaagcca ggagacctgc cagcacggtc acccaaccgg tggacggggc gtccatacgg
     3241 agcggtcttt cgcagcggtg acggcaatgc cggtgcgaag gccgtgagag caaggtctcc
     3301 cacgacattc cgcacacagg tccacaccca ctttgtggac cagtgcgtcc ttcgcatcgg
     3361 gcttcgtctt cacccgatgc gttcgcgtac gcgaacgtaa ccgaaggaac gtgtgtcatg
     3421 gggaaggggc atatcgccag gcttgccggt gccgcgctgg cgctggtcac actcgctgca
     3481 tccagcagtg cgcaaattgt tttgccgcaa atagatgtca gctggactcg actgaatagc
     3541 agcatggtcg gtacttcgac cagcatcatc agctcgcaag atatagaacg ttcacccgca
     3601 cagaacttgc cggacatcct gtcgcaacag acaggcatac aaatccagca cctgttaagt
     3661 tcaacaaacg gctcgcgtga cgcggtcgat ctgcgcgggt tcggcgcatt cgcgcaatcg
     3721 aatgtcctca ttcttgtcaa cggccgacgt tttcaggatt tcgatcttca gggtttcgat
     3781 ttttcctcga tcccgctcaa cagtatcgag agaatagaaa tcactcgcgg caatagcggc
     3841 acggtcctct acggtgatgg cgcaatcggc ggcgttatca atatcgtgct caagaaagga
     3901 tcttcgacgg cagcgtttaa tcgcgtcgag gcgtttgccg gttcgttcga gtactgggaa
     3961 ggccgtgcgt cagctgctgc gacgagcggg ccatggtcga tcggcgcgtt cggcaatgcc
     4021 atcagctccg ctggctatcg cgtcaacagc gctctgcgtc agcgcaatat caattcgaca
     4081 ttgaactatg ccaccgacaa cctgggagca tatcttacgg tcgctggaga tcgtcagttc
     4141 cagggcttgc cagccgggtt gaacaacttg cccggcaact ttccctttac tctcgacacg
     4201 ccatggcaat cgaatactcc cctcgactgg ggcaagaaac aggggatcaa ctttgccacg
     4261 ggattcaata cgacactaac tcctggagtc gaactgattg tcgacggcag cgtgcggcgc
     4321 aaatttcagc aggcgcagtt cttcaattac ctcgacccgg ttaccttcct ctacaattta
     4381 agcgctgcgt cgccgatgaa ctacgtggac actgttatga caacgtcctc ggtgacgcca
     4441 cgggttgacg tgacacatcg gttatttggg ctgcccaatc ggctgttcgc gggaatcgat
     4501 ttctacaaca cgcaatacga ttcggaccgg cccacggcgc ccggcctcgt gcccgttcat
     4561 agatacgaca tccg
//
LOCUS       DATDHO010000555         3785 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_469156, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000555 DATDHO010000000
VERSION     DATDHO010000555.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3785)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3785)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3785
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469156"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(804..1466)
                     /locus_tag="VIY07_10620"
     CDS             complement(804..1466)
                     /locus_tag="VIY07_10620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018447519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382242.1"
                     /translation="MPNLRINSVVIAVASMLCVPQSAFAQSATTTPPHVPLQKTIGQA
                     KTEVVPSLIVFNARGASLQGGKLVLNGITPNSIIFADRPVRAAGHDTTAHIVEDWDKG
                     SDNFGKDPPNATVSAFTKEGSGVKDAVVVLKSPKLEGDKLTFDVDVLEGDLTGADGAA
                     AVFIDIIGRPLTPLSYAGVARRTAYRGAVYAGAAGAAAAAAYYHPYYRPLCGHPPYPP
                     CY"
     gene            complement(1716..2189)
                     /locus_tag="VIY07_10625"
     CDS             complement(1716..2189)
                     /locus_tag="VIY07_10625"
                     /inference="COORDINATES: protein motif:HMM:NF019498.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6382243.1"
                     /translation="MDTSSTVTRSFVREPAAGSTLDVLGVTHIYKATAAETGGSFSLW
                     EAVVPPGKGAPPHTHTREDEAFYVLSGELIIELEDAPHRVAPGGFFFGARNRRHAIRN
                     VSDQPARVLILSAPSCGLDQMFAELAAATAAGIPGIEKLAAITAKYGVIVEPPAI"
     gene            complement(2467..3549)
                     /locus_tag="VIY07_10630"
     CDS             complement(2467..3549)
                     /locus_tag="VIY07_10630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6382244.1"
                     /translation="MIPNWLSKLSAFLSRVAGLTIIVSSAVAMGTSAADAQSSVGQIT
                     VLYDAFGNNSTMKKDWGFSALIEYEGKRILFDTGNNADIFAHNVEAKAVDLRQLDFAI
                     ISHRHGDHTSGLNHLLKINPTVKIYAPQENFGVFGAALPGSFYRRNESLPQDMRYFDG
                     MAPETLRFGSPWPEANFTWVTKTTEVAPGFHLILLNGTWGVDLEVKEVSLAIDTPDGI
                     VLIAGCSHSTIEKITEAARSAINKPIHLVLGGTHMLAANDDQIRSITASLRDKWNVRY
                     IAPVHCTGEPAFAILKESFGDRYIYAGLGTTVLLGPKVTVKAEAGQPNKSAMDEEDFR
                     SYREAMRQGPFRAFLGAERQLARSRE"
BASE COUNT          774 a         1092 c         1079 g          840 t
ORIGIN      
        1 gaagcgctgg cgatcaacgg cggccaatag tctcggtctt ggatttttct cgcagctccg
       61 tggcctgctt gtcgatttcc gggcaggtca gcaattctac gtaacttgga gcgccaccga
      121 ccgtgactaa accagtgcaa cggcttcgct gtgctgagct gtattgagtc cagtctttct
      181 ggagcgtgct gcgcgcgcct tgctcgtctc gctggcacgc tgccgagtcg cgtccaggca
      241 aatctgcccg cgcggcggtt ggtcggcagg tccggtcgac atcgaacttt ggcactgaat
      301 tcgaagccat aacgatttgc gaggcggcca ttatgattgc caatagcggc atgatcctgc
      361 tccatatgca tgctcattta caggaggaac tctggtgcgc gctttcctgt tccgaccaca
      421 ttcttgccgg acagccaacg cacgaataaa accggaaaac cctattggaa agttccatcc
      481 agtgcctgag ttgcagcgcg tgccttcgga tttttgactt tgacccagtt agtgggtgtt
      541 tctgcgaatt gcggcatagc acgcgttgta taagggaaac gcgctgccga cagggttgcc
      601 ccgcaattca caagttgtac gcagcgccgg gtaacatttg tgctttcttg acctgagcca
      661 tcttttttca tgtccgcttt caccccaaaa gcggacatgg ctcgccaatt tggaatgtcc
      721 gctaaagggg ggcgttcggc ttccgctcgc gctagagcga gagcagtgtt ccgctcattt
      781 tcatgcgaca accccaacac ctgctagtaa cagggtgggt acggaggatg gccacagagt
      841 ggccgatagt acggatgata gtaggcagca gcggcagctg ctccggctgc gcccgcatat
      901 accgcgccac gatatgctgt gcgccgcgcg acgcctgcat aagacagcgg ggtaagtggc
      961 ctgccaatga tgtcgatgaa cactgcggct gccccgtcgg ctcctgtaag atcgccttcg
     1021 aggacgtcga catcaaatgt gagcttgtcg ccctcaagct tgggcgattt cagcaccacc
     1081 acggcatcct tcacgcccga accttccttg gtgaatgccg agaccgttgc gttcggcggg
     1141 tccttgccga agttgtcgct gcccttgtcc caatcctcca cgatgtgagc cgtcgtatca
     1201 tggccggcag cgcgcacggg ccgatcggca aagatgatcg agtttggagt aatgccgttc
     1261 aaaaccagct tgccgccctg caggctggct ccccgcgcat tgaagacgat gagagaaggg
     1321 acgacttctg ttttggcctg gccaattgtc ttctgcagtg ggacgtgtgg cggcgttgtt
     1381 gtcgccgatt gtgcgaatgc cgattgtggc acgcagagca tgctagcgac ggcaatcacc
     1441 actgagttga tccggaggtt tggcatctag agatctcccg ttctgccgat agttgatcca
     1501 tgtgagaggt gctccccggg gggactctga tcggcgaata tggcggacgg aactgacctt
     1561 tggtccaatt gccttgtctt ctcagcgggc tccggcagat cataagcaga caggacattc
     1621 gagctggcgc ggcgtgccgg aagtgaactg gcctcgctcc gccttcgcct tccaacgcta
     1681 tcgtttgtcg ttcgggctgg tcgcccaggt ccatctcaga tggcgggcgg ctcgacgata
     1741 actccgtatt tggcggtgat agccgcgagc ttctcgatcc cgggaatccc ggctgcggta
     1801 gcggccgcca attcggcaaa catctgatcg agtccgcagc tcggcgcact caggatcagg
     1861 acacgcgccg gctgatcgct gacattgcgg atggcatgac gtcggttacg cgcaccgaaa
     1921 aagaagccgc caggcgcgac gcggtggggc gcgtcctcga gttcgatgat gagttcaccg
     1981 ctcagcacat agaaggcttc atcctcacgg gtgtgggtat gcggcggtgc tcccttgccc
     2041 ggcggaacca cggcttccca gagcgagaag gaacctcccg tctcggcggc cgtcgcctta
     2101 tagatatgcg tgactcccag cacgtcgaga gtcgaaccgg ctgcgggttc acgcacgaat
     2161 gatctggtta cggtgctgct cgtgtccatt attgatctct ttttgcaata gtccgatcga
     2221 tgtccgcttg ccttctcgaa ccggacattc atccgtgcaa gtggcaagtc cgctgggcca
     2281 agagcggaca ttgcgccact tatcactcgt ccgcgcggat taccgagttc ccagttccga
     2341 ttgatcgaat ctatgactca ggccagaggg aggcgcggcc aagccaactg tcgcgcgggt
     2401 tcatcgcgga ctctctaacg cagcaatcaa gaaatggttc gcggacgcgc gtattaggcc
     2461 gccgcctcat tcgcgcgatc gcgctagttg cctctcggcg ccgagaaacg cacggaaagg
     2521 gccttgcctc atcgcttcgc ggtagctgcg aaagtcctct tcgtccatcg cgctcttgtt
     2581 aggctggccc gcttccgctt tgaccgtgac tttcggccct aataaaacag tcgtgccgag
     2641 accggcataa atgtaccgat caccaaaact ctccttcaaa atcgcgaaag caggttcgcc
     2701 ggtgcagtga accggagcga tatagcgcac attccattta tcacgcagag aggccgttat
     2761 gctcctgatt tggtcgtcgt tcgccgccag catatgagtg cctcccaata caagatgtat
     2821 cggcttgtta atcgcgcttc gggcggcctc agttattttt tcaattgtcg aatgactgca
     2881 ccccgcgatc aggacaatcc cgtcaggtgt gtcgatcgcc aacgagactt ccttcacctc
     2941 tagatcgacg ccccaagtac cgttcaacaa aatgagatgg aatcccggcg ccacttcggt
     3001 tgtctttgtc acccaggtga aattagcttc aggccacggg ctaccaaagc ggagcgtctc
     3061 gggcgccatg ccgtcgaaat agcgcatatc ctgaggaagg gattcgttgc gccggtagaa
     3121 actgcctggc aaagccgcac cgaacacacc gaagttctct tgcggtgcat agatcttcac
     3181 cgtggggttg attttcaaaa ggtgatttaa cccacttgtg tggtcgccgt ggcgatggga
     3241 gataattgcg aagtcaagct gtcttaggtc aacagccttg gcctccacat tgtgcgcaaa
     3301 gatgtccgca ttattgccgg tatcaaacag gatacgtttg ccttcatact cgatcagtgc
     3361 agagaacccc cagtccttct tcatcgtaga gttattgcca aaggcgtcgt aaagaactgt
     3421 gatctgcccg acgctggatt gcgcatctgc cgcggaggtg cccatcgcca ccgctgagga
     3481 gacgattatg gtcaagccag cgacacgaga caggaatgcg gagagctttg aaagccagtt
     3541 ggggatcata gttacctccc ctgtgcggcg ataactccga ctaggatgat atcaccaaaa
     3601 agaggaaaga taaccggcgc ggtggctcgt gctcggccgc ctcaactccg agaacaccac
     3661 cgccgttcgt cgccgccaat cggcctgctc tcgtgtcaga aggcatgcgg gttgccccag
     3721 aaccaccaga ggaaagccag catcaaatcc cagggatgtc cgctttgggt caaaagcgga
     3781 agtaa
//
LOCUS       DATDHO010000556         3500 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_469198, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000556 DATDHO010000000
VERSION     DATDHO010000556.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3500)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3500)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3500
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469198"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2416
                     /gene="ppdK"
                     /locus_tag="VIY07_10635"
     CDS             <1..2416
                     /gene="ppdK"
                     /locus_tag="VIY07_10635"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HEY6382245.1"
                     /translation="NPLLVSVRSGARASMPGMMDTVLNLGLNDETVAALAKKSGDRRF
                     AYDSYRRFITMYSDVVLGVGHEHFEELLDQHKERQGYSLDTDLSADDWAELVLRYKKR
                     VKDELGHDFPQDPHEQLWGAIGAVFGSWMNQRAITYRKLHNIPESWGTAVNVQAMVFG
                     NMGDTSATGVAFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPQEISEAARKEAGSDK
                     PSMEYTLPRAYAELKRIYNVLERHYRDMQDLEFTVEQGKLWMLQTRAGKRTAKAALRI
                     AVELANEGLISKNDAVLRVDPLALDQLLHPTIDPRAHRRVIATGLPASPGAASGEIVF
                     SPDEAAQLKSDGRKVVLVRVETSPEDIHGMHAAEGILTTRGGMTSHAAVVARGMGKPC
                     VSGAGSLRVDYSAGTMSAGGQTFKKGDYITVDGSTGQVLAGKVDMIEPQLSGEFATLI
                     GWADKVRRLGVRANADTPADAKAAMRFGAEGIGLCRTEHMFFEEDRIQAVREMILADD
                     EKARRVAIAKLLPMQRADFVELFEIMAGRPVTIRLLDPPLHEFLPHGDKEIAEVAAAM
                     GADPKKLAARANELSEFNPMLGFRGCRIAIAYPEIGEMQARAIFEAAVEAARRTGKPV
                     VPEVMVPLIASKIEFDLVKSRIDAMAQAVAKEKGAKLDYQVGTMIELPRASLMADEIA
                     QTAEFFSFGTNDLTQTTFGISRDDAASFLGIYTARGILPVDPFVSLDQRGVGELVKIG
                     VERGRKVRPKLKVGICGEHGGDPPSVAFCHQAQLDYVSCSPFRVPIARLAAAQAALGK
                     SAASQA"
     gene            complement(2518..>3500)
                     /locus_tag="VIY07_10640"
     CDS             complement(2518..>3500)
                     /locus_tag="VIY07_10640"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEY6382246.1"
                     /translation="KARDGRIVLAKNEPLPGGGWVSTHEDVTEQRRAEQERADIRDQE
                     ERRASIDSAIASFRPAAEKLLSTVSESATAMRSTAQALFGSSEHTSQRAESAVQAFHE
                     ASANVETAAVAADELSRSVAEISRQLTHTTDIVSLATSEARSTDGEIGGLADGAQKIG
                     DVVKLIRNIAGQTNLLALNATIEAARAGEAGKGFAVVASEVKSLAVQTAQATEDIANH
                     ILAVQDSTSAAVQAIRQIAARMRDINENTSAVATSVSQQNSATIEISRNVASAAEGTT
                     HVVSVLGDVAGAATQTRSSAEVVRDASEAVDHAVANLRLEVEDFLAKVAV"
BASE COUNT          634 a         1079 c         1126 g          661 t
ORIGIN      
        1 caatccgcta ttggtgtccg tgcgctccgg cgcccgcgca tcgatgcccg gcatgatgga
       61 cactgttctc aatctgggtc tgaacgacga aacagtcgcg gcccttgcga agaagtccgg
      121 cgaccggcgg tttgcctatg acagctatcg gcgtttcatc accatgtatt ccgatgtggt
      181 gctgggcgtc ggccatgagc atttcgagga attgctcgac cagcacaagg agcgtcaggg
      241 ctacagcctc gacaccgatc tgtcagcgga cgattgggcc gagctcgtcc tgcgctacaa
      301 gaagcgggtc aaggacgaac tgggccatga cttcccgcag gatccgcatg agcagctttg
      361 gggcgcgatc ggagccgtgt tcggctcgtg gatgaatcag cgcgccatca catatcgcaa
      421 gctgcacaat attcccgaaa gctggggcac ggcggtgaac gtgcaggcca tggtcttcgg
      481 caatatgggc gacacctcgg cgaccggcgt cgccttcacg cgcaatccgt cgaccggcga
      541 gaagaagctc tacggcgaat tcctgatcaa tgcgcagggc gaggacgtgg ttgccggaat
      601 tcgcacgccg caggagatca gcgaggcggc acgaaaagaa gcggggtccg acaagccgtc
      661 tatggaatac accctgccga gagcctatgc cgagctcaag cgcatctaca atgtgctcga
      721 gcgtcactat cgcgacatgc aggatctcga attcacagtc gagcagggca agttgtggat
      781 gctgcagacg cgcgcgggga agcgcaccgc caaggccgcg ctgcgcattg cagtcgagct
      841 cgccaacgaa gggctgatct cgaagaatga tgcggtgctg cgcgtcgatc cgctcgcact
      901 cgaccagctg ctgcatccga ccatcgatcc acgtgcgcat cggcgcgtca ttgccacggg
      961 actgcccgca tctccgggcg cggccagcgg cgagatcgtg ttttcgcctg atgaagcggc
     1021 gcaactgaaa tccgacggca ggaaggtcgt gctcgtgcgc gtggaaacct cgcccgagga
     1081 catccacggc atgcacgcag cggaaggcat cctgaccacg cggggcggca tgacgtccca
     1141 tgcggcggtc gtggcgcgcg gaatgggaaa gccttgcgta tccggggccg ggtcactgcg
     1201 cgtcgactac tctgccggca ccatgagcgc gggtggacag actttcaaga aaggcgacta
     1261 catcaccgtc gacggctcaa ccgggcaggt gctggcgggc aaggtcgata tgatcgagcc
     1321 tcaactgtcg ggcgaattcg cgaccctgat tggctgggcc gacaaggtgc gccggctcgg
     1381 cgttcgcgcc aatgccgaca cgcctgccga cgcgaaggcc gccatgcggt tcggcgccga
     1441 gggcatcggc ctttgccgaa cggagcacat gtttttcgag gaagaccgga tccaggccgt
     1501 gcgcgagatg atcctcgctg acgatgagaa ggcgcgccgt gtcgcaattg ccaagcttct
     1561 gcccatgcaa cgcgccgatt tcgtcgagtt gttcgaaatc atggccggcc gtccggtgac
     1621 gatccggctg ctggatcccc cgctgcatga gtttcttccc catggtgata aggagattgc
     1681 ggaggtcgcg gccgccatgg gcgccgatcc gaagaagctc gccgctcgcg cgaacgagct
     1741 ttccgagttc aacccgatgc ttggcttccg cggctgccgg atcgctatcg cctatccgga
     1801 aattggcgaa atgcaggctc gcgcgatttt tgaggcagcg gtcgaggctg cccgccgcac
     1861 cggcaaacct gtggtgcccg aagtcatggt gccgctgatc gcgagcaaga tagaattcga
     1921 tctggtgaag tcgcgcatcg acgcgatggc acaggccgtg gccaaggaaa aaggcgccaa
     1981 gctcgactac caggtcggca cgatgatcga gctccctcgc gcgtccctga tggctgacga
     2041 gatcgcacag accgccgaat tcttttcgtt cggcaccaac gatctcacgc aaacgacctt
     2101 tggaatttca cgcgacgatg cagcgagctt tctcgggatc tacacggcac gcggcatttt
     2161 gccggtcgat cccttcgtat cgctcgatca gcgcggcgtg ggcgagctgg tcaagatcgg
     2221 cgtcgagcgc ggtcgcaaag tccgcccgaa gctgaaagtc gggatatgtg gggaacacgg
     2281 aggcgatccg ccgtcggtgg ccttctgtca tcaggcgcag ctcgactatg tgtcctgttc
     2341 gcctttccgc gtgccgatcg cgcgccttgc tgcggcgcag gccgcgcttg gcaagtcagc
     2401 tgcgagccag gcgtagagtc ccttcatgtc cgttcgtccc cgcgcaggtg gggaccctga
     2461 cccccttggc agcaatggat ggatccccgc ttgcggggat gaacggaggc cggtccgcta
     2521 caccgccacc ttagcgagga aatcttccac ttcgagccgc aggttcgcga cggcgtgatc
     2581 gaccgcttcg gaggcgtcgc gcacgacttc cgcggaggac cgtgtctgcg tcgctgcgcc
     2641 ggcgacatcg cccaggaccg aaaccacgtg agtagtgccc tccgccgcgc tcgcgacatt
     2701 gcgtgaaatc tcaatggtgg ccgagttctg ctgcgaaacg gatgtcgcaa ctgccgatgt
     2761 gttttcattg atatcgcgca tgcgcgcggc gatctgccgg atggcttgca cggctgcaga
     2821 ggtcgaatcc tgcactgcaa ggatgtgatt ggcgatgtct tcggtcgcct gggcggtttg
     2881 cacggccagc gatttgacct cggacgcgac caccgcgaag cccttgccgg cctcgcccgc
     2941 acgagcggct tcgattgtgg cattgagggc cagcaggttt gtttgtccgg ctatgttgcg
     3001 gatcagcttg accacgtcgc cgatcttctg tgcgccgtcg gcgagcccgc cgatttcgcc
     3061 gtcggtggag cgcgcctcgc tcgtggctag actgacaata tcggtggtgt gagtgagctg
     3121 gcggctgatc tctgcaaccg agcgcgacaa ttcgtccgcg gcaaccgctg ccgtttcgac
     3181 gttggctgac gcctcatgga acgcttgcac tgcactttcg gcgcgttgcg atgtgtgttc
     3241 agaggagcca aaaagcgcct gcgctgtcga acgcatcgcc gtcgcgcttt cgctcacggt
     3301 ggaaagtagc ttctcagcgg ccggcctgaa tgatgcgatg gcagagtcga tgcttgcacg
     3361 ccgttcctcc tggtcgcgaa tatcggcccg ctcctgttcg gcccggcgtt gttcggtgac
     3421 atcctcatgc gtcgaaaccc aaccgccgcc cggcaacggc tcattcttgg caagcacgat
     3481 gcggccgtcg cgtgccttca
//
LOCUS       DATDHO010000557         4754 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_224950, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000557 DATDHO010000000
VERSION     DATDHO010000557.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4754
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_224950"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(366..785)
                     /locus_tag="VIY07_10645"
     CDS             complement(366..785)
                     /locus_tag="VIY07_10645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY6382247.1"
                     /translation="MADARNETMNGLFDRGLALRRQVLGSEYVDGSLKTANEFMMAFQ
                     HITTEWCWGYAWGRPGLNLKTRSLLNLAMLTALNRAAEIKLHVRGAINNGVTVDEIKE
                     VLLHATVYCGIPAGLDAFKAANEVLKEMGKLPATGAV"
     gene            815..1870
                     /locus_tag="VIY07_10650"
     CDS             815..1870
                     /locus_tag="VIY07_10650"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6382248.1"
                     /translation="MDRGLEKIDGVATEKMTIIDSHCHIWGRGFLPPSFFHRAAEGWA
                     QKEPGRKENMIIPRLLDGVIDETGDDFVKNMDTARVNAGFVMMVDAGTPLFGMEPATT
                     IDRQVDYYATLQERHRGRLFAHVAVDHRRASCLSLVSRAVRELGFVGIGEITPAGFTV
                     ADDALRPLMRLAADLGIPVQIHTRSGIWTELDGANLTESNPAHPIHVARLAHALPSLK
                     LVLCHAGYPHWWQAAAQAIADCPNCVLDVSNWNERLAEPHEIVARLAAWRSLLGIERI
                     LFASDQVSGPRFTGARSSLGKWVAFFRDLPAIAHAAGYRFTAEEASRILGRNAQVFYG
                     LELEPFVHAVAEKSNRP"
     gene            1839..3425
                     /locus_tag="VIY07_10655"
     CDS             1839..3425
                     /locus_tag="VIY07_10655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003530843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6382249.1"
                     /translation="MPLPKSRTVPDLLDEIADRFPDREALVGGDRRFTYTELRDEVRT
                     FAKGLHALGVSPRDKVAVLMGNRPEWIIADLAICSLGAIMVAVNTWVTSRELGYILHH
                     SDTSMLIATDRFLKYDYFAMLAELEPLPLKLPLLRSIVHVGARGYRDSIPFKDVGERG
                     RTKPEAVLEAAAQAIDPQDVAYLLYTSGSTSTPKGVQLQHFALIENMWQIGERMHVTE
                     RDRLWLAVSLFWGLGCENALFNLLTHGGCVVLQEHFEPKEALRLISSERCTLFYGTPN
                     MAQALFDHPDRRNYNLTCLRSGGTIGSPEQIMRVVNLGARDICNIYGLTETYGNCCVT
                     DASEPLEIRCNSVGRPLPGVDIRIVDSDTGKALPCGEIGEIRVKGYVTIGYFKDEVKT
                     RETLDADGFFLTGDLGYLDAEGRLHFRGRTKEMIKTGGINVAPIEIEEILMTHPAVKL
                     AYVVGVPDPQRDEVIAAVIVRRQDEAVEEMDLLAHCRRALAAYKIPRLMKFVNETDLP
                     LTVTGKLQKNRLSEFFVDRD"
     gene            3437..4306
                     /locus_tag="VIY07_10660"
     CDS             3437..4306
                     /locus_tag="VIY07_10660"
                     /EC_number="3.1.1.99"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HEY6382250.1"
                     /translation="MVSVECIVQTDDVLGEVPLWHPIENALYWIDLFKPAIHRLEILD
                     RRVQTWTPPEKLGSFALRAEGGLLIAGRSGLSLFDSSNGHLDKIIDPEADNTENILND
                     GRCDRRGRFWVGSMNKMLTHASGRLYRFEQQRLDVVAERIWVPNSICWSPDDRCMYFA
                     DSHLRTIFAYEFDIDSGTIGGRREFVYMDSIPGVPDGSSVDSEGFLWNAVFDGGCLVR
                     YAPDGRTDRVVPLPVSRPSACTFGGPDLATLYVTTARFRLSPEKLATEPYAGGLLAID
                     VGVKGLPEPFFSG"
     gene            complement(4307..>4754)
                     /locus_tag="VIY07_10665"
     CDS             complement(4307..>4754)
                     /locus_tag="VIY07_10665"
                     /inference="COORDINATES: protein motif:HMM:NF013920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HEY6382251.1"
                     /translation="RFSDSYRGSGSLMSSLDRPRPRIGPDNAPFWEGCRSRSLMLPTC
                     AECGKAHLPPGPVCPFCLSDRITWQRATGQGRVSTWTIVHKAWFPAFRDDIPYNVVQI
                     ELDEGPRLTSSLVGLSGRKPEIGQRVEVVFDDVDDTLTLHRFRVLA"
BASE COUNT          978 a         1350 c         1352 g         1074 t
ORIGIN      
        1 caactcgttt tcgtttatga gccgaaaatg caggaactct tacggctacc cttagggcct
       61 ctgccggttc gccactatgg tggccaagct gcgatccgca aaacgccaat agtcgaacac
      121 ttgccgaacg ggccgtcaac aagggccgct ttgaattcga attcagggat tccaaatcga
      181 aattcatgtt tcaattttcg cgatcacctg aaaatcggat tgtggggttg tatgcggatt
      241 acttccacat tgcgaaaggc caacgaagcg cggccggaat gacgaccagt cgcgcccatt
      301 ggtctcgtcg ctcggaatca gtgccgcctc tgatgaccgg cgcgcgtcga tgtgccgcac
      361 agtatttaga ccgctccggt cgcaggcagt ttgcccatct ctttgagcac ttcattggct
      421 gctttgaatg catcaagtcc ggccgggata ccgcaataga ccgtcgcgtg caggagtact
      481 tccttgattt cgtcaaccgt cacgccgtta ttgatagcgc cgcgcacgtg cagtttgatc
      541 tctgcggcgc gattgagcgc tgtcagcatc gcgagattaa gcagactgcg tgtcttaaga
      601 ttgaggccag gacgccccca cgcatagccc cagcaccatt ccgtcgtgat gtgttgaaac
      661 gccatcatga attcgttggc ggtcttgagc gatccgtcga cgtattctga tcccagcacc
      721 tgacgtcgca gcgccagtcc gcgatcgaaa agaccgttca tcgtttcatt gcgtgcatcg
      781 gccatcatat actccttgtt ggttggaaga tgcggtggat cgtggcttag agaagattga
      841 cggtgtggcg accgaaaaaa tgacgattat cgatagtcat tgccatattt ggggacgcgg
      901 atttttgcca cccagtttct tccatcgcgc ggccgaaggc tgggcacaga aggaacctgg
      961 tcgtaaagag aatatgatta taccgagact ccttgatggc gtgattgatg aaaccggcga
     1021 cgattttgtg aagaacatgg acaccgcccg cgttaatgcg gggtttgtca tgatggtgga
     1081 tgccggcacg cctttgttcg gcatggagcc cgcaacaact attgatcggc aggtcgacta
     1141 ttatgccacg ctgcaagaac gtcatcgtgg gcgcttgttt gcgcacgttg ccgtcgatca
     1201 tcgccgcgcc tcctgcctgt cacttgtcag ccgtgctgtg cgggaactcg gtttcgttgg
     1261 tattggtgaa atcacgcctg ctgggttcac ggtcgccgat gacgcactcc gtccattgat
     1321 gcggcttgcc gccgacctcg ggatcccggt gcagattcat acgcgttcgg gaatatggac
     1381 agagctcgat ggcgccaacc tgactgagtc caatcctgcg catccgattc atgttgcgcg
     1441 gctcgcccat gcactgccat cactcaagct tgttttatgc cacgccggct atccacattg
     1501 gtggcaagca gccgcccaag cgatcgccga ctgcccgaac tgcgtgctcg acgtttcaaa
     1561 ttggaacgag cggctcgcag agcctcacga aattgtagcg cggttggcgg cgtggcgcag
     1621 tctgctcggc attgagcgta tcttgttcgc gtcggaccag gtctccggtc cgcggtttac
     1681 cggagcgcgc tcgagccttg gcaaatgggt tgcattcttt cgcgatttgc cggcgatcgc
     1741 acatgcggcc ggataccgct tcacagcgga ggaggcgtcg cgcattttgg gtcgcaatgc
     1801 ccaggttttc tatggtctcg aattagagcc tttcgtccat gccgttgccg aaaagtcgaa
     1861 ccgtccctga tctgctcgat gaaatagccg atcgctttcc tgaccgagag gcgctggtcg
     1921 gcggtgatcg ccgattcacc tatacggagt tgcgggacga ggtccgaacc ttcgccaagg
     1981 gcttacatgc acttggcgtc agcccacgtg acaaggtcgc agtgttgatg ggcaatagac
     2041 cagaatggat cattgctgat ctcgcaattt gttcgcttgg cgcgatcatg gtcgccgtga
     2101 acacctgggt taccagtcgc gagctcggat atatccttca ccattcggat acatcgatgc
     2161 tgatcgccac cgatcgtttt ctcaaatacg actatttcgc gatgctcgcc gaactggagc
     2221 cgctcccact gaagctaccc ttgttgcgca gtatcgtgca cgtcggagca cgcggctatc
     2281 gcgacagcat tccgttcaaa gacgtcggcg aacgagggcg cacaaaaccg gaggcggtcc
     2341 tggaggccgc ggcccaagcg atcgatccgc aggatgtagc ttacctcctg tacacgtcgg
     2401 gctccacctc gacgccgaag ggcgttcagc tgcaacattt cgcgctcatt gagaacatgt
     2461 ggcagattgg cgagcgaatg catgttaccg aacgagaccg tctttggctc gcggtatcgc
     2521 tgttctgggg gctcggctgc gagaatgccc tgttcaatct gctgacccat ggcggctgtg
     2581 tggtcctaca ggaacatttc gagccgaaag aagcgttacg cctgattagc tcggagcgtt
     2641 gcactctgtt ttatgggacg cccaacatgg cgcaggcgct tttcgatcat cccgaccgcc
     2701 gcaattataa cctcacttgc ctgcgctccg gtggcaccat cggctcgccg gagcaaatca
     2761 tgcgcgttgt taacctcggc gcacgcgaca tctgcaatat ttatggcctc acggagacat
     2821 atggaaactg ctgcgtcacg gatgcatccg agccgctgga gatacgatgc aacagtgtgg
     2881 gccgtccgct tcccggggta gatatccgta tcgtcgacag cgataccggc aaggctctcc
     2941 cttgcggaga gatcggcgaa attcgcgtga agggttacgt caccatcgga tacttcaagg
     3001 atgaggttaa aacccgcgaa accctcgatg ccgatggttt tttcttgact ggcgaccttg
     3061 gttatctcga cgccgaaggc cgtctgcatt ttcgtggccg cacgaaagag atgatcaaga
     3121 ccggcggaat caacgtcgct cctatcgaga ttgaagagat tctcatgacc catccggccg
     3181 tgaagctcgc ctatgtcgtc ggggtgcccg atccgcagcg cgatgaggta atcgcggcgg
     3241 tgatcgttcg ccggcaggat gaagcggttg aggaaatgga ccttctcgcg cattgccggc
     3301 gcgctcttgc cgcgtacaaa attcctcgcc tcatgaagtt cgtaaacgag accgaccttc
     3361 cgcttaccgt caccggcaaa ctgcaaaaaa accgattaag cgaattcttc gtcgaccgcg
     3421 actgaccgag agcacgatgg tttctgtcga atgcatagtg cagactgatg atgtcctcgg
     3481 cgaggttccg ctctggcatc caatcgaaaa cgcactctat tggatcgacc tgttcaagcc
     3541 agcgatccac cgtcttgaga tcctcgatcg ccgagtccag acgtggacac cacccgagaa
     3601 gcttggctca ttcgcgttac gtgctgaagg tggcctgttg atcgctgggc gcagtggtct
     3661 atcgcttttc gattccagca acggccatct tgataagatc attgatccgg aagcggacaa
     3721 taccgagaac attctcaacg atggtcgttg cgatcgtcgc ggtcgctttt gggtcggttc
     3781 catgaacaag atgctcactc acgcgagtgg ccggctctac cgcttcgaac aacagcgact
     3841 tgatgtggtc gccgaacgaa tttgggtgcc caatagcatt tgctggagcc cggatgaccg
     3901 gtgcatgtat ttcgccgaca gccacctgcg aaccatcttc gcttacgaat tcgacatcga
     3961 tagcggcaca attggcgggc gacgcgaatt tgtctatatg gacagcattc cgggcgtacc
     4021 ggacggttcc tcggtcgaca gtgaaggatt tctgtggaat gcggtttttg atggcggctg
     4081 tctggtgcgc tatgcccccg acgggcgcac cgatcgcgtt gtaccattgc cggtgagccg
     4141 tcccagtgcg tgcactttcg gcggccccga tctcgcaacc ttgtacgtaa ccacagcacg
     4201 atttcggctc tccccagaga aactcgcaac cgagccgtat gccggaggtc ttcttgccat
     4261 cgatgtcggc gtaaaagggc tgcccgaacc ttttttctca ggttagctaa gcgaggacgc
     4321 gaaaacgatg caatgtgagt gtgtcatcga catcgtcaaa cacgacctca acccgttgac
     4381 caatctcggg cttgcggccg gagagaccga ccagactcga ggttagccgc gggccttcat
     4441 cgagttcgat ctgcacaacg ttgtatggaa tgtcgtccct gaacgccgga aaccacgcct
     4501 tgtggacgat ggtccaagtg ctgacgcggc cctggccggt ggcccgctgc caggtgatgc
     4561 gatcagaaag acagaaggga cacacgggcc cgggtggtag atgcgccttg ccgcattccg
     4621 cgcaagttgg aagcatgagg ctacggctgc gacacccctc ccaaaacggc gcattatccg
     4681 ggccgatccg tggacgcggt cgatcgagac tgctcataag cgatccgctc ccgcggtaag
     4741 aatcactgaa tcgc
//
LOCUS       DATDHO010000558         3100 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_126483, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000558 DATDHO010000000
VERSION     DATDHO010000558.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126483"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            381..545
                     /locus_tag="VIY07_10670"
     CDS             381..545
                     /locus_tag="VIY07_10670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382252.1"
                     /translation="MMRWGARAVILAGFRQDDVDDARVTKNETLVRRGKKWFRYDVNS
                     APGDSVLLKS"
     gene            complement(624..2138)
                     /locus_tag="VIY07_10675"
     CDS             complement(624..2138)
                     /locus_tag="VIY07_10675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY6382253.1"
                     /translation="MSTILEAFRLVMQTDVLLAILLASIYGLVVGSLPGLSATMATAL
                     LVPVTFYLSPIAAVATIIAASAMAIFSGDIPGALLRIPGTPASAAYTDEAYAMTRKGQ
                     PEMALGICVWFSALGGIAGTLSLIVLAPPLAEMALSFSTYEYFWLAFLGLMCATMVAR
                     SSPVKAIASMLLGLLVACIGIENPAGTPRFTFGITDLLGGIEVIPALVGVFAVSEVMR
                     AMLTAEPPKLPYRRFGSILKGQIALTKKYVKPQVRGNIVGIIIGVLPGAGADMAAWVS
                     YSMSKRFSKEPKKFGTGHPEGLIEAGASNNASLASGWVPSLLFGIPGDTITAIAIGVL
                     YMKGLNPGPTLFTERASSMYALYIIFIIANIIMIPLGIAMIRVAALVLRAPRASVMPV
                     IVLLCAVGAFATGNNLFAVITVAAFGVIGYVMERNGYPVAAMVLGIVMGTMVEQSFVT
                     SLIKSDGSILPFFSRPVAAVLASMTIAALLWPLGVWAWRLLRRPTAYIVRNEKP"
     gene            complement(2141..2662)
                     /locus_tag="VIY07_10680"
     CDS             complement(2141..2662)
                     /locus_tag="VIY07_10680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY6382254.1"
                     /translation="MQLSDRVTGLFMVALGGLAAYGGSRLPPVPGQQIGPNVFPLVVG
                     IGLAICGGMIAFGIGRRYEEEAEADLAKITSQIATDTVAEDHSHNWWRGLRALVPPAL
                     LLFYVLAVDRIGFLPTAAALVLTTSLALGARLRLAVPMAIGAPLFVNLVFSKLLRVPL
                     PSGLLPMPWLGLP"
     gene            complement(2734..>3100)
                     /locus_tag="VIY07_10685"
     CDS             complement(2734..>3100)
                     /locus_tag="VIY07_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6382255.1"
                     /translation="TCSVPEARALIEAGKARSLAIMAAERNPAFKDVPTLKEAMGIDY
                     TTGAWRGFAAPKGLPADIANAMTAALKKVNEAAEFREFMAGRGFGVRWADGTGFAKFM
                     DEGNKAMGVAMKAAGLAKS"
BASE COUNT          641 a          954 c          988 g          517 t
ORIGIN      
        1 tcagatggat gagtccccgc tcatccctaa tgtgccggtc acccgtcccc aacgagaccg
       61 gcacatttat tttgcgaccg accgcgaggg gaactcctcg ctccggggaa acgctcctat
      121 ctagtgggcg gtcagtttca ggagcgcgag gtgcaatgat gaaactgctc tgcgttattg
      181 ctgccgctat ggctttgata gtcgcatcaa gtacggctat ggcagcaccg aaaaaacggt
      241 ctgtatctaa taaagcaact catcgcatga agtcgccaca gtcagtacct gcacccactt
      301 cgtcaatggc ctcccaacaa tccaacattc agggaatacg aggaacttaa acgccaaggt
      361 tggtacaaag aagataaggc ttgatgcgtt ggggtgcgcg agccgtgatc ctggcaggat
      421 ttagacaaga cgatgtcgat gacgcgcgcg tgaccaagaa cgagacgctg gtccggcgtg
      481 gcaagaagtg gttccgctac gatgtgaact ctgccccggg cgacagtgtt cttctgaaat
      541 cctaaacggg gcgctgcacc gaacccttgt ctcttttcaa tccgggcgtg gccgttcaag
      601 ggtctgaccc gcccttgaac gccctacggt ttctcgtttc gaacgatgta tgccgtcggc
      661 cgccgtaaca gcctccacgc ccatacgccg agaggccaca agagggctgc gatggtcatc
      721 gaggcaagca ccgcagctac cggccggctg aagaacggaa ggatgctgcc gtcggacttg
      781 atgagcgaag tcacgaagct ctgctccacc atcgttccca tgacgatgcc gagcaccatc
      841 gccgcgacgg gatagccgtt gcgctccatg acatagccga tgacaccgaa agcggcgacg
      901 gtgatgactg cgaaaaggtt gttgcccgtt gcgaacgcac cgaccgcgca cagaagcacg
      961 atgaccggca tcacggatgc gcgtggcgcc cgcaacacca gcgcggcgac gcggatcatc
     1021 gcgattccga gcgggatcat aatgatgttg gcgatgatga agatgatgta gagcgcgtac
     1081 atgctggacg cgcgctcggt aaagagcgtg ggacctggat tgaggccctt catgtacagc
     1141 acgccgatcg cgatggcggt gatggtgtcg cccgggatgc cgaacagcag ggagggaacc
     1201 cagccggaag ccaggctcgc gttgttgctg gcgccggctt cgatcagtcc ctccgggtgc
     1261 ccagtgccaa acttcttagg ctccttcgag aagcgcttgg acatggagta gctgacccat
     1321 gccgccatgt cggcgccggc accgggcaga acgccgatga tgatgcccac gatgttgccg
     1381 cgcacctgcg gcttgacgta cttcttcgtc agcgcgatct ggcccttgag aatgctgccg
     1441 aagcggcgat agggcagctt gggcggctcg gccgtgagca tcgcccgcat cacctccgag
     1501 acggcgaaca cgccgaccag cgccgggatc acttcgatgc cgccgaggag gtcggtgata
     1561 ccgaaggtga agcggggggt gccggcgggg ttctcgatgc cgatgcacgc aacgagcagc
     1621 ccgagcagca tgctggcgat cgccttcacc ggcgaggagc gcgcgaccat ggtcgcgcac
     1681 atgaggccga ggaatgccag ccagaaatac tcgtaggtag agaagctgag cgccatctcg
     1741 gccagtggcg gcgccagaac gatcagcgag agcgtgcccg cgatgccacc gagcgcgctg
     1801 aaccacacgc agatgccgag cgccatctcg ggctggccct ttcgcgtcat tgcataggct
     1861 tcgtcggtat aggcggcaga cgccggcgtg ccagggatgc gcaggagcgc gccggggata
     1921 tcgccggaga agatggccat ggccgaggcc gcaatgatgg tcgcaaccgc cgcgatcggc
     1981 gaaagataga aggtgactgg cacgagcagc gccgtcgcca tcgtcgccga aaggccgggc
     2041 agtgagccga ccaccagtcc gtagatcgag gcgagcagga tcgccagaag gacatcggtc
     2101 tgcatcacga ggcggaaggc ttccaggatt gtgctcatgg tcagggcaac cccagccacg
     2161 gcatgggcag gaggcccgac ggcaacggca cgcgcagcag tttcgagaac accagattga
     2221 cgaatagcgg cgcgccgatt gccatcggca cagcgaggcg caaccgcgca cccaatgcga
     2281 gcgatgtggt gagcaccagt gcggcagccg tcggcagaaa gccgattcgg tcgaccgcga
     2341 gaacataaaa caggagcaat gccggcggca ccaacgccct caggccgcgc caccaattgt
     2401 gcgaatggtc ctccgcaaca gtgtcggtag caatctggct ggtgattttg gcgaggtcgg
     2461 cttcggcctc ctcttcatac cggcgaccga tgccgaaagc gatcatgccc ccgcagatcg
     2521 cgagaccgat gccgaccacg agcggaaaca cattggggcc gatctgctgg cccggcacgg
     2581 gtggcaggcg cgagccgcca taggccgcca aaccgccgag ggcgaccatg aacaggccag
     2641 tcacacggtc ggagagctgc atgagcttct tggatggtat ggcgacgcaa cgattccggg
     2701 gcccgcttgg cgcgagcccc ggatcttctt ggctcagctc ttggcgagac cggccgcctt
     2761 catggcgaca cccatcgcct tgttaccctc gtccatgaac ttggcgaagc ccgtaccgtc
     2821 ggcccatctc acgccgaagc cgcgaccggc catgaactcg cggaactcgg cggcctcgtt
     2881 gaccttcttg agcgcggccg tcattgcgtt ggcgatgtct gcaggcagtc ccttgggcgc
     2941 tgcaaatccg cgccaggcac cggtggtgta atcgataccc atcgcctcct tgagcgtcgg
     3001 cacgtccttg aaagccgggt tacgctcggc cgccattatg gcgaggctcc tcgccttgcc
     3061 ggcctcgatc aaggcgcgcg cctccggtac cgagcaagtg
//
LOCUS       DATDHO010000559         3009 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_275250, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000559 DATDHO010000000
VERSION     DATDHO010000559.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3009
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_275250"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..824
                     /locus_tag="VIY07_10690"
     CDS             <1..824
                     /locus_tag="VIY07_10690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6382256.1"
                     /translation="MVGTSTVLLTVAIIFLRNQIKPILRLADAAESFGKGREVPNFRP
                     RGAREVRRAAAAFIEMKTRIERAIEQRTAMLAGVSHDLRTVLTRFKLELALIEDSPEV
                     EAMKKDVDEMARMLEAYLAFARGDSGETSAPTDMAEFLEELRLDAERHGHKTSVVFHG
                     PPIVTVRPAAFKRCLSNLVSNAARFAPSIAISGHRDHRYLTVTVDDDGPGIPASLRED
                     VFKPFLRLDDARNQDEGGTGLGLAIARDIARSHGGDITLGDSPLGGLRATVRVPV"
     gene            complement(821..1525)
                     /locus_tag="VIY07_10695"
     CDS             complement(821..1525)
                     /locus_tag="VIY07_10695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY6382257.1"
                     /translation="MARRSKRQRRTSPPPPPPPTRGTGDREKAISALMTLLATRRFED
                     IGLAEVAGQAGIKLSQLRAEFGSTLAILAAHIKEIDRLVLAGTDPMMEDEPPRERLFD
                     VLMRRLDALARYKEAVRSLIISARRNPGLAFALNAMSVRSQHWMLEAAGINASGPRGA
                     LRAQGAALMFARVLSVWVDDEDQALDRTMAALDRSLISAERWSGFLDDLCAIPKCVLR
                     GPRRRRRTRGEEAEAA"
     gene            complement(1597..2433)
                     /gene="proC"
                     /locus_tag="VIY07_10700"
     CDS             complement(1597..2433)
                     /gene="proC"
                     /locus_tag="VIY07_10700"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEY6382258.1"
                     /translation="MANRVAKTLAKFRGTLVLVGAGKMGSAMLDGWLARGLKPRQIVV
                     IEPQPGKMLKSLARRGLRLNPKIKATVGAAVVIAVKPQSASEALQPLSGYIDKSTLVL
                     SIMAGRTIGFLENSLPPRTAIVRAMPNTPAAIGRGISVAVANANISGQHRNQASSLLA
                     AIGEVEWVRDERLMDAVTALSGSGPAYVFLLAEAMASGGIASGLPPALATRLARETVA
                     GAGELIHRSDVDAATLRQNVTSPGDTTAAALEVLMGPEGLERLLTQAIEAATRRSRDL
                     AG"
     gene            complement(2449..2949)
                     /locus_tag="VIY07_10705"
     CDS             complement(2449..2949)
                     /locus_tag="VIY07_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HEY6382259.1"
                     /translation="MSLTSLAEESRINPLDVVERLAAGNDWSFERSSDDEITILVTGR
                     WTDYQLSYTWMGDIEALHLACAFDLRVPERRRAEVQALISLINERLWVGHFDHWNAEG
                     MIMFRHALVLAGGTEASGKQCEALLGTALEACERYFSAFQFVVWAGKAARDALDAAMF
                     ETSGEA"
BASE COUNT          565 a          940 c          939 g          565 t
ORIGIN      
        1 ggatggtcgg cacttcgacg gtgctgctca ctgtcgcaat catttttttg cgcaatcaga
       61 tcaagcccat tctccgcctt gctgacgccg ccgagagctt cggcaagggg cgcgaggtgc
      121 ctaatttccg cccgcgcggc gctcgggagg tgcggcgcgc ggcggccgct tttatcgaaa
      181 tgaagactcg catcgagcga gcgatcgagc aacgcacggc catgcttgca ggcgtgtcgc
      241 acgacctgcg gactgttctc acgcgcttca agcttgaact tgcgctgatc gaggactcgc
      301 cggaagtcga ggcgatgaag aaggacgtcg acgaaatggc gcgcatgctg gaagcctatc
      361 tggcgttcgc gcgcggcgat agcggcgaga cttccgcgcc cactgatatg gccgaattcc
      421 ttgaggaact acggctcgac gcggaacgtc acggccacaa gacaagcgtc gtcttccatg
      481 gcccaccaat cgtcacggtg cggccggcgg cattcaagcg ttgcctcagc aatctggttt
      541 ccaacgcggc acgcttcgcg ccgtcgattg cgatctccgg tcaccgcgat caccgctatc
      601 tcacagtaac agtggacgat gacggcccgg gcataccggc gagcttgcga gaggatgtgt
      661 tcaagccctt cctgcggctc gacgacgcgc gcaaccagga cgaaggcggt accgggcttg
      721 gcttggcgat tgcgcgcgat atcgcgcgat cccatggcgg cgatattacg ctgggcgata
      781 gcccgcttgg cggattacgg gcgacggtgc gagtacccgt ttaagccgcc tctgcttcct
      841 caccgcgtgt gcgacgacgg cggcgcggcc cacgcaagac gcactttgga atggcgcaca
      901 ggtcgtcaag gaaacctgac caccgttccg cgctgatcag gctgcggtcg agggctgcca
      961 ttgtcctgtc cagtgcctgg tcctcgtcgt cgacccagac agacagtacg cgcgcaaaca
     1021 tcagcgccgc tccttgcgcg cgcagagcgc cgcgggggcc cgacgcattg atgcctgcag
     1081 cttccagcat ccagtgttgc gaacgcaccg acatagcatt caacgcgaac gcaagtcccg
     1141 gattgcgccg ggccgaaatt atgagggagc gcactgcttc tttgtaccgg gcgagggcgt
     1201 cgaggcgccg catcagcacg tcaaagagac gctcgcgtgg cggctcgtcc tccatcatcg
     1261 gatcggtgcc ggcaagcacg agacgatcga tctccttgat gtgcgccgcg agaatggcca
     1321 gcgtggagcc aaactcagcg cgcaattgtg aaagttttat tccagcttgg ccggctactt
     1381 cggcaagacc gatgtcctcg aatcgacgtg tcgccaggag ggtcatgagg gcacttatgg
     1441 ccttctcccg gtcgccggtg ccgcgggttg gcggcggagg gggcggaggt gaagtcctac
     1501 gctgacgttt cgacctgcga gccatgacga cctcccattg gcgtttttat accttctaat
     1561 ctaggtccgt gatggcgacg gttctagtgc gggaacctaa cccgcgaggt cgcgcgaccg
     1621 gcgggtggcg gcctcgatgg cctgcgtcaa taggcgttcg aggccttcag gccccataag
     1681 cacctcgagt gctgcagccg tcgtgtcgcc cggggaggtc acattctgtc gcagggtcgc
     1741 ggcgtcaaca tcggatcggt ggatcaactc gccggccccg gcgacggttt cacgcgcaag
     1801 tcgggtcgca agcgcaggtg gcagtccgga cgcgatacct ccgctggcca tcgcttccgc
     1861 cagtaagaat acgtacgccg gacctgaacc ggacagtgca gtcactgcgt ccataagacg
     1921 ctcgtcgcgg acccattcca cttcgccgat ggctgcgagc aggctcgatg cctgattgcg
     1981 gtgctggccc gagatattcg cattggcgac tgcaacgctg atgccacggc cgatggctgc
     2041 aggcgtgttt ggcatggccc gcacgattgc cgtgcgcggc ggcagggagt tttcgaggaa
     2101 tccgatggta cgcccggcca taatggacag aaccaatgtg gacttgtcga tgtacccaga
     2161 gaggggctgc agggcctcag acgcactctg aggctttacg gcaatcacca cggcggcgcc
     2221 caccgttgct ttgattttcg gattaagccg gaggcctcgc cgcgccagtg acttcagcat
     2281 tttgcctggc tgtggttcga tgaccacgat ctgccttggc ttgagaccgc gcgccagcca
     2341 cccgtcgagc attgcgctgc ccatcttgcc agcgccaacc aagacaaggg tgccgcggaa
     2401 ctttgctagc gttttggcaa cacggttcgc catggccgat caccggcctc atgcctcgcc
     2461 cgaggtctcg aacatagcgg cgtcgagtgc atcgcgcgca gctttgccgg cccagaccac
     2521 aaattgaaag gcactaaagt aacgctcgca agcctcaagt gcagtgccga gcagtgcctc
     2581 gcactgtttg ccggaagctt cggtcccgcc tgcaagtacc agcgcgtgcc gaaacatgat
     2641 cattccttcg gcgttccaat ggtcgaaatg cccgacccag agccgctcat tgatcaggga
     2701 gatcagcgct tgcacctcgg cgcgccttcg ttccggcact cgcaaatcga aagcacaagc
     2761 caggtgcagg gcctcgatgt cccccatcca cgtgtaggag agctgatagt cggtccagcg
     2821 gccggtgacc agaatggtaa tttcgtcatc gctggaacgc tcgaatgacc agtcgttgcc
     2881 cgccgccagg cgctccacaa cgtcaagagg attgattcga gattcttccg cgaggctggt
     2941 cagggacatg acgtctccgc ttggctgaat tgagcgagag gaaacgcacg ccaccacacg
     3001 cacggaccg
//
LOCUS       DATDHO010000560         3050 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_175760, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000560 DATDHO010000000
VERSION     DATDHO010000560.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3050
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175760"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VIY07_10710"
     CDS             <1..411
                     /locus_tag="VIY07_10710"
                     /inference="COORDINATES: protein motif:HMM:NF015651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HEY6382260.1"
                     /translation="TLCRSPLSMSYVIGCSIVIHLLTIVSAWCCIMAIAAPVSFVQVL
                     ILLPPVLLISTIPISIAGWGVRESSMIAAFAFAGLAESDGLTLSILFGAAIFVIGLAG
                     GLVWIFSGLRLRPATQAAGGQPGHQDTSLARANE"
     gene            404..988
                     /locus_tag="VIY07_10715"
     CDS             404..988
                     /locus_tag="VIY07_10715"
                     /inference="COORDINATES: protein motif:HMM:TIGR01662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY6382261.1"
                     /translation="MSDQTPALHANKKEDLRPAVFLDRDGVLNVDNGYAHKPEQLVWI
                     EGAPEAVRLLNQSGYYVFVITNQSGVARGYYDENAVRAFHAHMQDNLKQHGAHIDAFY
                     YCPHHPEGTVKPFAVLCSCRKPRTGMLEQAAREWPVDIGKSFLIGDKDDDVVAAAAFN
                     IRAIKFNSAQQSLPDLVRQELARRASSQDRHRRP"
     gene            985..2160
                     /locus_tag="VIY07_10720"
     CDS             985..2160
                     /locus_tag="VIY07_10720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6382262.1"
                     /translation="MSDKILQSRIFISLMLLWLAGVALRLTILAVPPLIPMIHDELKL
                     SATQVGILTGLPSMLFAIVAVPGSLLIARLGIRAALVVGLALTAIGGALRGALLDVTW
                     LYAMTIAMGAGVAIMQVALPPAVRAWVPHRIAFATALYTNGLLIGEILPVALMFAVLP
                     FFGSWQAAFVAWSIPVALIAVTVMWLAPSPASSDSTPARRRWWPDWRNALIWRLGIML
                     GTINAIYFATNAFIPDYLRDRGQDEWIAAALIGLNVGQLPASMLLLAFASRLERKVWP
                     YIVCGLVCVIATGGIVFGTGAWVVAAATVQGFAASIILILVLALPPLLSAPDDVHRVT
                     AAMFTISYSCAVIVPVISGLAWDLTGIASTSFLPIALCGILLVVLAPAINHVPRPGR"
     gene            2165..2569
                     /locus_tag="VIY07_10725"
     CDS             2165..2569
                     /locus_tag="VIY07_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY6382263.1"
                     /translation="MRPVPVGEKGSYTLRVSPAHLANQFKDAALPPVFATPMMVTAME
                     NAALNAVRDYLDPGESAVGVEVNIHHLAATPVGHRITAEAVVTKVEGRRIEFNVSARD
                     EIEEIGRGTHARMVVDLPRLHQRLAAKARSQS"
     gene            2811..>3050
                     /locus_tag="VIY07_10730"
     CDS             2811..>3050
                     /locus_tag="VIY07_10730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382264.1"
                     /translation="MKTFLLATVSMVALTSVARAAEFPDDARPFSSIPAADWQVGHMG
                     MQGGTSPGDALSTKAIEHGVPILRRGSSVQRAHDSA"
BASE COUNT          551 a          945 c          908 g          646 t
ORIGIN      
        1 accttgtgcc gctcaccttt gtcgatgagc tatgtcatcg gatgctcgat cgtgatccat
       61 ttgctcacga tcgtttcggc ctggtgctgc atcatggcca tcgccgcgcc tgttagcttc
      121 gtacaggtcc tgatccttct accgcctgtg ctgctgattt cgaccattcc gatctcgatt
      181 gccggctggg gcgttcgcga gagcagcatg atcgctgcct ttgcttttgc cggactggca
      241 gagagcgacg gacttacgtt gtcgatcctt tttggtgccg ccatttttgt cattggactg
      301 gcaggaggtc ttgtatggat cttcagcggc ttgcgactcc gacccgcgac gcaagcggct
      361 ggcggtcagc ccggtcatca agatacgtcc ctggcaagag ccaatgagtg accaaacacc
      421 cgcgctccac gcaaacaaga aagaagatct ccgtcccgcg gtatttcttg atcgcgacgg
      481 cgtcctgaat gtcgacaacg gctatgcgca caagcccgaa caactcgtat ggatcgaggg
      541 agcgcccgaa gcggtgcgcc ttttgaacca gtccggatac tacgttttcg tcattacaaa
      601 tcagtccggg gtcgcccgcg gctactatga tgaaaacgcg gtgcgggcat tccatgcgca
      661 catgcaagac aacctgaaac agcatggcgc ccatatcgat gcattttatt attgtccgca
      721 tcatcctgaa ggcaccgtca agccgttcgc cgtgctttgc agctgtcgaa agccccgcac
      781 aggaatgctg gagcaagccg cgcgagaatg gcccgtcgat atcggcaaga gcttcctgat
      841 cggcgacaaa gatgacgatg tcgtcgccgc tgccgccttc aatatccgcg caatcaaatt
      901 caattcggcg cagcaatcgc tgccggatct ggtgcgccag gagctggcga gacgagcaag
      961 ctcgcaagac cggcaccgcc gcccatgagc gacaaaatcc ttcaatcgcg cattttcata
     1021 tcgctcatgc tgctgtggct cgcgggcgtt gccctgcggc tgacaattct ggccgtgccg
     1081 ccgctcatcc cgatgattca cgacgaattg aaactgagcg ccacgcaggt cggcatcctg
     1141 accggactgc catcgatgct gttcgccatc gtggcggtgc cgggttcgct gctgattgcc
     1201 cgacttggga ttcgcgccgc cctggtggtc ggccttgcgc tcacagcgat cggtggtgcg
     1261 ctgcgcggcg cgctgctcga tgtgacctgg ctctacgcca tgacgatagc catgggcgcc
     1321 ggcgtagcca tcatgcaggt ggcactgccg ccggccgtcc gagcctgggt tccgcaccgc
     1381 atcgcattcg ctaccgcgct ctacacgaac ggactgctga tcggcgaaat cctgcccgta
     1441 gcgctgatgt ttgcggtgct gccattcttt gggagctggc aggcagcctt tgtcgcctgg
     1501 agcatcccgg tcgcactcat cgcggtcacg gtgatgtggc tggcgccctc gcccgcgagc
     1561 agcgactcga cgccggcgag acgccgctgg tggcccgatt ggcggaacgc attgatctgg
     1621 cggctcggca tcatgctcgg caccatcaat gccatctatt ttgcaaccaa tgccttcatt
     1681 cccgactatc tgagggaccg cggccaggac gaatggatcg cagccgcact gatcggcctc
     1741 aatgtagggc agttgccggc gtcgatgctt ttgcttgctt ttgccagccg gctcgagcgt
     1801 aaggtctggc cctatatcgt gtgcgggttg gtctgcgtga tcgcaaccgg cggcatcgtg
     1861 ttcggcaccg gcgcctgggt cgtggcggct gccacggtgc aggggtttgc cgcgtcaatc
     1921 atattaattc tggtgctggc cctgccgccg cttctgagcg cgcccgatga cgtgcaccgt
     1981 gtgacggctg cgatgttcac gataagctac agctgtgcgg tgattgtgcc ggtcatcagc
     2041 ggcctggcgt gggacctgac aggcattgcc agcacgtctt ttctgccgat cgcactgtgc
     2101 gggatcctgc tcgtcgtact tgccccggcg atcaatcatg ttccccgtcc tgggagatag
     2161 cgccatgcga ccggtccccg tcggagaaaa agggtcttac acgctgcgcg tttcgcccgc
     2221 ccatctggcc aatcagttca aggacgccgc cctgccccct gtgttcgcca cgccgatgat
     2281 ggtgaccgcg atggagaacg cggcgttgaa tgcggtgcgg gactatcttg acccgggcga
     2341 aagcgcggtc ggcgtcgaag tcaacatcca tcatcttgcc gccacgcccg ttggccatcg
     2401 catcaccgcc gaagcggtgg tcaccaaggt ggagggccgc cgcatcgaat tcaatgttag
     2461 cgctcgcgac gagatcgagg agatcggcag aggcacgcac gcccgcatgg tcgtcgacct
     2521 gccacgcctt catcagcggc tcgcagccaa agcacgctcg caatcctgaa gccactctgt
     2581 tgtggcaccg ttgcgcatcg gcgatgatgc cgctgcgcgt ctcgatattt tgatcggcgc
     2641 gctccggact ctcattgaag cgctgcacgc gcaacgcagc tgctcggcgc atcttccttc
     2701 attcagatga ttcattgaaa gcatgcacgt cgttcgatca caggacgcac gtcggaaaag
     2761 agtatggcca agtaatccaa tactgattcg cggcgacaca ggtagaaacg atgaagacgt
     2821 ttttgctagc gaccgtgtcg atggtggcgt taacaagcgt agcacgcgca gccgaattcc
     2881 ctgatgatgc acggccattc tcctccattc cggcagcgga ttggcaggtt ggtcacatgg
     2941 gcatgcaggg cgggacatcg ccaggcgatg ccctgtcgac caaggccatc gaacatggtg
     3001 tgccgatcct gcgccgcggc agcagcgtgc agcgagctca cgactctgcc
//
LOCUS       DATDHO010000561         5467 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_423552, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000561 DATDHO010000000
VERSION     DATDHO010000561.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5467)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5467)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5467
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423552"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..245
                     /locus_tag="VIY07_10735"
     CDS             <1..245
                     /locus_tag="VIY07_10735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1772 domain-containing protein"
                     /protein_id="HEY6382265.1"
                     /translation="AFLLMHATYWLITHPVNNFWLKDFQPEKLAKGFFSFDPLGNVER
                     LRTADWTALRDRWEYSHVLRAALALLSLVLLVASVV"
     gene            465..836
                     /locus_tag="VIY07_10740"
     CDS             465..836
                     /locus_tag="VIY07_10740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382266.1"
                     /translation="MKQTAIKRAVLPIVSATGLLLSVAIAQTPPQDKDVIPPRSINLT
                     AEQSYIIKEIVLTETRAEQAPPNDEIKIGNKVADDIKLLAFPKLVAEKVPQVKTYKFF
                     VIQNQVVVVSPQDNVVADIIK"
     gene            complement(953..1372)
                     /locus_tag="VIY07_10745"
     CDS             complement(953..1372)
                     /locus_tag="VIY07_10745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEY6382267.1"
                     /translation="MKVKEAMHKGVEWVGPDTPVIELAKLMRKHDIGAIPIGENDQLV
                     GMVTDRDIVCKGLAEDSDPARLTARDVMTPGIHCCRDDDDLDKAVRHMEDLKIRRLPV
                     INKSKRMIGILSLGDVSGIAPNGLLSEYVKSVSAHHH"
     gene            complement(1547..1840)
                     /locus_tag="VIY07_10750"
     CDS             complement(1547..1840)
                     /locus_tag="VIY07_10750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011082959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GYD domain-containing protein"
                     /protein_id="HEY6382268.1"
                     /translation="MATYVVLARFTDQGIKNAKDSPKRAQAFKQMAETFGVTVKDIFW
                     TQGRYDIVTIVEAPDEHSATALNLSLNALGNIRTESLRAFSSADMMKIVAKML"
     gene            2015..2791
                     /locus_tag="VIY07_10755"
     CDS             2015..2791
                     /locus_tag="VIY07_10755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382269.1"
                     /translation="MNKTKQSSQEASVVEFAAGGFRYIPAVFQYSAGVAASAGFKIRR
                     VRFHTPLPIPAGFAAIARIIQAAGRPLTAFCACELRSPAPFSDDGFRKFNQSYVVTLG
                     DWGIMENDRNPVARSNVCPEIDPPAQPSFHAFCFTVETSEAAPSFVISGSGEAREGGA
                     SYAERTVRHGETSPEAMREKAHFVLGEMERRLAMLDTDWTATTATQVYTVYDLYPFLA
                     EEIIRRGAARSGLTWHFCRPPVRGLEFEMDCRGVRIEEVL"
     gene            complement(2812..3708)
                     /locus_tag="VIY07_10760"
     CDS             complement(2812..3708)
                     /locus_tag="VIY07_10760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018897735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382270.1"
                     /translation="MVDIAVNAKLPSASEKVETPLRRALRRLFRRKSAVFGLAIVVFF
                     VALAVFAPLLSPYDPTAQSWSLVRNEPSVAHWFGTDDLGRDILARVIFGARASLMAGV
                     ISVGIALSIGVPLGLAAGFLGGLLDALISRMTDAMLACPFLILAIALAAFLGPSLGNA
                     MIAIGVTATPIFVRLTRGQVLAVKMEDYVEAARAVGNPRWRIVFVHILPNIMPALLVQ
                     ATLSIAAAIIAEAALSFLGLGQQPPAPSWGSMLNSAQRFLVNAPWMAVWPGLAIFLTV
                     LSFNLVGDGLRDALDPRESGRG"
     gene            complement(3714..4655)
                     /locus_tag="VIY07_10765"
     CDS             complement(3714..4655)
                     /locus_tag="VIY07_10765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382271.1"
                     /translation="MLNLLGKRLLQLIPTLFFVSVIIFSLQQLLPGDPALIMAGEERD
                     PAVIEQIRRQYHLDQPIPVQYFYWVKGVLSGNLGESMRIHVPVLDLILQKLPVTIQLA
                     SMAIVIALTIGITAGIISAVKKNTVWDYVANAFALWGISTPNFWLGIMLIFLFSVKLG
                     WLPASGYVPLTEDWRASLASTIMPAFVLGNAIAAILMRHTRSAMLQVLESDYVRTARA
                     KGLLERTVILKHAMRNALTPVITLGALEFGTLLSGAVLTEQIFTIPGFGKLIIDAVFN
                     RDYAVVQGVVLVTATVYIALNLLADIAYVLVNPRLRS"
     gene            complement(4684..>5467)
                     /locus_tag="VIY07_10770"
     CDS             complement(4684..>5467)
                     /locus_tag="VIY07_10770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382272.1"
                     /translation="IKNVRADKTLQLATALELGYQGLDINVGNGAQSKNPLGQSAKVR
                     QALELAIDREALNQVVFNGEFRPGNQWVNPENPYYQQAYPVAKRDVAKAKALLKEAGV
                     AAPFEVDFMVPKGAETQAVAEVIQAMAGEIGINMKIRVTEFATSLKQAEQGNYQAFLL
                     AWSGRTDPDGNTYIFFKCNAPQDSMGYCKPEVDKLLDEARIPSDMAARKAIYEKLTKT
                     ILEDLPKIYLYHRRILIAHSTKLNGYKQMPDGLVRVVGLSLK"
BASE COUNT         1160 a         1582 c         1597 g         1128 t
ORIGIN      
        1 tagcgtttct gttgatgcat gcgacctatt ggctgatcac gcacccggtc aacaatttct
       61 ggctcaagga cttccagccg gaaaagttgg ccaagggctt cttttccttc gatccgcttg
      121 gaaacgtcga acgtctgcgc acggcggact ggacagcact tcgtgaccgc tgggaatact
      181 cccacgtctt acgcgcagca cttgccttgc tcagcctcgt tctactcgtc gcgtccgtcg
      241 tctagatgct ccgcaaaaat gtccgctatt ggtctcagcg gacactctaa actggctgcc
      301 aaatgtccct taagatgctt ctgactctat cggaaccaac aaaatccgtc ggtaaccatt
      361 gttcccgggg aacagccaga tgagcattct cgtttagcaa ggaggaacaa ggatcccatg
      421 cgatccattt tcgcacgcca ttggggaatt tcgaggtctc gactttgaaa cagacagcca
      481 tcaaacgcgc agtattgccg atcgtgagtg cgaccggttt gcttctcagc gttgccattg
      541 cccagacgcc gccacaagac aaggacgtta ttccaccccg ttcgattaac ctcaccgccg
      601 agcagagcta cattattaaa gaaattgtat tgaccgagac tcgcgccgaa caagctccgc
      661 ctaacgatga gatcaagatc ggcaataagg tcgcagacga cattaaatta ctggcgtttc
      721 cgaagctcgt tgccgaaaag gtaccgcaag tgaagaccta caaatttttt gtgatccaaa
      781 atcaagttgt ggttgtatcc cctcaagaca acgtagtcgc ggacataatc aagtaacgac
      841 agaacgtcgg tccaatcgcg ctgcaatcaa cacgcgcgcc agcatgccag acgccaatgc
      901 cgagttcgcg gcatcgtcat cttcgatagc gcccagcaat gaaccgactg cttcagtggt
      961 gatgggccga tacgctcttg acgtattcgg acagcaggcc atttggcgca atgccgctga
     1021 cgtcgccaag actaaggatg ccgatcatcc gcttgctctt gttgatcacc ggcagcctgc
     1081 ggattttcaa atcttccatg tgccgcaccg ccttgtcgag gtcatcatcg tcccgacagc
     1141 aatggatacc gggcgtcatc acatcgcgcg cggtcaggcg ggcaggatcg ctatcctcgg
     1201 ccaatccttt gcatacgatg tcgcggtccg tcaccatccc aacgagctga tcgttctctc
     1261 cgattggaat ggctccgata tcatgtttgc gcattaactt cgcgagctcg atgaccgggg
     1321 tgtcgggacc aacccactca acgcccttgt gcatcgcttc tttgaccttc atggcagacc
     1381 tccgttgctg gaagtaaatg cacggccggg aagtcgtcct acgatccaag tgcgagagat
     1441 cggcttgggt ccgggatttc ccggatatgc ctcgatccaa tttgaatgtt agtgcgtttt
     1501 tgaattgctc ggaagcccgt tccgctcgcg atactgattg cgccggtcag agcattttgg
     1561 cgacaatctt catcatgtcc gctgatgaaa aggctcgcag cgactccgtg cggatattgc
     1621 ccagtgcgtt gagactcagg ttaagtgccg tggcggaatg ctcatctgga gcctcaacga
     1681 tcgttacgat gtcataccgt ccctgggtcc agaatatgtc tttcacggtc actccgaatg
     1741 tctccgccat ttgcttgaaa gcttgtgccc gtttcggaga gtctttggcg tttttgatgc
     1801 cttgatcggt gaatctggca agcacgacat aggttgccat cgccgttctc cctgactgtt
     1861 ggtttgactg ctaacccgaa aggctcgctg acgaaaccct tcgtgcttta tgctaatacc
     1921 gcaccttgaa attcggggac gtaatgtctt ttggccgcaa acgagaacga aaattgaccc
     1981 aagccgccgc ccgcttgtgc gctgacgact gactatgaat aaaaccaagc agagttccca
     2041 agaagctagc gtcgtcgaat tcgcagcggg cggatttcgc tacattccgg cggtgtttca
     2101 atattccgct ggtgtggctg cttccgccgg tttcaagatc cggcgggtgc ggttccatac
     2161 tccactgccg atcccggcag ggttcgcggc aattgcacgg attatccagg ccgccggcag
     2221 gccgctgacg gccttctgcg cgtgcgaact gcgctcgccc gcgccattca gcgacgatgg
     2281 ctttcgcaag ttcaaccaaa gttacgtcgt gacccttggt gactggggca tcatggaaaa
     2341 tgaccgcaac cccgttgcgc gcagcaatgt gtgcccggaa atcgatccgc ccgcccagcc
     2401 gtcgtttcac gcgttctgct tcaccgtcga aacgtcggag gcggcgccga gcttcgtcat
     2461 ctccggcagc ggcgaggcgc gcgagggcgg cgcaagctat gccgagcgaa ctgtgcgcca
     2521 tggcgagacg agtcccgagg ccatgcgtga aaaggcgcat tttgtactgg gggaaatgga
     2581 acgccgcctc gcgatgctcg acacggactg gaccgcaacc acggcgacgc aggtctacac
     2641 ggtctacgac ctctatcctt tcctcgccga ggaaatcata cgtaggggcg cggcgcgctc
     2701 cgggctgaca tggcatttct gccggccgcc ggtgagaggc ctcgaattcg agatggattg
     2761 ccggggagtg aggatcgaag aagtgctcta agggtcgtgt gcccgcaacg gctagcctcg
     2821 gccgctctcg cgcgggtcga gtgcatcgcg caggccatca ccgaccaaat tgaatgagag
     2881 caccgtcagg aagatcgcaa gtcccggcca taccgccatc cacggggcat tgaccaggaa
     2941 acgttgtgcc gaattcagca tgctgcccca cgaaggcgcc ggcggctgct gccctaggcc
     3001 aaggaaggag agtgcggctt cggcgatgat ggccgcggcg atggacaaag tcgcctgaac
     3061 cagcagcgcc ggcatgatgt tcggcaggat atggacgaat acgattcgcc agcgcggatt
     3121 tcccaccgcg cgcgcggcct cgacgtaatc ctccattttg accgcgagga cttgtccgcg
     3181 cgtcagccgc acgaagatcg gagttgccgt caccccgatg gcgatcatgg cgttgccaag
     3241 acttggaccg aggaaagcgg ccaatgcgat ggccaggatg agaaacggac aggcgagcat
     3301 cgcatctgtc atccggctga tcagcgcatc gagaaggccg cccagaaagc cggctgccag
     3361 gccaagcggc acaccgatcg aaagcgcgat gccaacggaa atgacgcccg ccatcagaga
     3421 cgcgcgcgcg ccgaaaatga cgcgagcaag gatgtcgcgg ccaagatcgt cggtcccgaa
     3481 ccagtgcgca acggacggct cgttgcgcac cagactccag ctttgcgccg taggatcata
     3541 tggcgagagc aggggcgcga agacagcgag cgcgacaaaa aacacgacaa tggccaggcc
     3601 aaaaaccgcg cttttgcgac ggaaaagccg tcgcagtgcg cggcgaaggg gcgtttcgac
     3661 cttctcgctc gccgagggca gctttgcgtt gacagcgatg tcgaccatgt tcgtcagctg
     3721 cgcagccgcg gattgacgag gacgtaggcg atgtcggcca gcagattaag cgcgatatag
     3781 accgttgccg tgaccaggac gacgccctgc accacggcgt agtcgcggtt gaagaccgca
     3841 tcgatgatca gcttgccgaa accggggatc gtgaagatct gctcggttag tacggcgccg
     3901 gacaacaagg tcccgaattc gagcgcgccg agggtgatga cgggggtgag ggcgttccgc
     3961 atcgcatgct tgaggatgac cgtgcgctcc aaaaggccct tggcccgggc cgtccgcacg
     4021 tagtcgctct cgagcacctg aagcatggcg ctgcgggtat ggcgcatcag gatggctgcg
     4081 atcgcattgc cgagaacaaa tgccggcatg atcgtggagg cgagactggc gcgccaatct
     4141 tcggtcagtg gaacgtaacc cgaggcgggc aaccagccca gtttcaccga aaacaggaag
     4201 atcaacatga tgccaagcca gaaattcggc gtcgatatgc cccacagcgc gaatgcgttg
     4261 gccacgtagt cccagacggt gtttttcttc accgccgata taattccagc ggtgattcca
     4321 atcgtgagcg cgatcacgat tgccatcgag gcgagctgga tggtcaccgg caatttttgc
     4381 agaatgagat caagtacagg cacgtgaatg cgcatcgact cgccgagatt gccggacagc
     4441 acgcctttca cccagtagaa gtattgaacg ggaatcggct ggtcgaggtg atattgccgg
     4501 cggatctgct cgatcaccgc cggatcgcgc tcttcccccg ccatgatcaa ggcggggtcg
     4561 ccgggcagca attgttgcag cgagaagatg atcaccgaca caaagaacag ggtcgggatc
     4621 agctgcaaca accgtttgcc gaggaggttc agcattggcg accctccgcg agcacggcag
     4681 cggtcacttc aacgacagtc ccacaacgcg taccaatccg tccggcatct gcttgtagcc
     4741 gttaagcttg gttgagtgtg cgatcagaat gcggcggtga tagagataaa tcttggggag
     4801 gtcctcaagg atggtctttg tcagcttttc gtagatcgcc ttgcgcgcgg ccatgtcgga
     4861 gggaatgcgg gcttcatcga gcagcttgtc gacctcgggc ttgcaatagc ccatcgaatc
     4921 ctgcggggca ttgcatttga aaaagatgta ggtgttgccg tccgggtcgg ttcgtccgct
     4981 ccaggccagg agaaaagcct ggtaattgcc ttgctcggcc tgtttgagcg aggtcgcaaa
     5041 ttcggtgacg cggatcttca tattgattcc gatctcgccg gccatcgcct ggatcacctc
     5101 ggccactgcc tgggtttccg cgcctttggg caccatgaag tcgacttcga aaggcgcggc
     5161 gacgccggcc tccttcagga gggccttggc tttcgcgacg tcgcgtttcg cgaccggata
     5221 ggcctgctgg taataagggt tttccgggtt gacccactga ttgcccggcc tgaactcgcc
     5281 gttgaatacg acctggttca aggcctcacg atcgatggcc agttcgagcg cctggcgtac
     5341 ctttgccgat tggccgagcg ggttcttcga ttgagcgcca ttaccgacat tgatgtcgag
     5401 cccctggtag ccaagctcga gcgcagtcgc gagctgcaga gtcttgtcgg cacggacgtt
     5461 cttgatg
//
LOCUS       DATDHO010000562         1689 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_175888, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000562 DATDHO010000000
VERSION     DATDHO010000562.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_175888"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VIY07_10775"
     CDS             <1..188
                     /locus_tag="VIY07_10775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEY6382273.1"
                     /translation="EASKQLALVLEATALAERDVPDYVEVDHTKMTAKLARIPGLNEV
                     PYPVQMEPHLVVEYYSR"
     gene            complement(202..1338)
                     /locus_tag="VIY07_10780"
                     /pseudo
     CDS             complement(202..1338)
                     /locus_tag="VIY07_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611739.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
BASE COUNT          319 a          498 c          502 g          370 t
ORIGIN      
        1 aggaagcctc caagcagctc gctcttgtgc tggaggccac cgcgcttgcc gaacgcgatg
       61 tgcctgacta cgtcgaggtc gaccacacaa aaatgacggc gaagctcgcc cgcatccccg
      121 gactcaacga ggtaccgtat ccggtccaga tggagccgca cctcgtagtc gagtactatt
      181 cacgctagtc gcctgattca gtcagattga aggatataac tgcttgagtt taatgcgagc
      241 atccttggtg gtgaagtgcc agtctgactt ggtgttatgg gcattgcgct cgtgctccca
      301 ggcggcaatt tcgtcgatga gagtttgttt gtcggggata cggcggtcga ggcattgaga
      361 ggataggaca ccgagttcgg attcggcgag atcgagccaa ctgccgtgct tgggcgtgta
      421 atgccactcg aaacgctcga ccagccgcct tgcttcggca gctgggaagg cctcgtagag
      481 tgatgccttg ctgtggatat tgaggttgtc ctggaggagc acgatggtct tggcgcgcgg
      541 gaagtggaca tcggacaaat ccttcaaaga cgtgagcata gtcgatggcg gtgtggcggt
      601 ccgtcacctt gatgtggcgc cagccttcga gcggcgcgaa cagcatgaac agattggcgg
      661 tgccgttgcg ctcgtactcg taatcgaccc gcgccgcccg tcctggtttc atcgggatcg
      721 gctcgcgcgt ctcggcggtc agttgcttgg aggtctcgtc caggcagacc agcgggcgat
      781 cgggatcgcg cggccgcgtg tagacggcaa gcacgtcttc catcgcggct acgaaggcgc
      841 tgttggcctt cggcgggatg acccagcact gccggcgatg cggcttgaga cggttttttt
      901 gagcgcgcgt ccgatcgtgg aatcgctcgc gcgctcgaca atgccgagtt ccaccacctt
      961 gttctccaac agccgcaacg tccagcgcac gcgtcccttg ggcggcttgg agcaggccaa
     1021 ggcgatcagc ttagcttcct tctcgccatc gaaaatgcgc ggtacggccg gtgtcgcgcg
     1081 ctgtttgcgg ctcaaaaccg cttcgaagcc ctcttccacc agttgcttgc gcgcgcggta
     1141 gatcatcgac gcgctggtgt ccaaggcctt gatgatcctg ttgtcactcc agccttcgcc
     1201 agcgtccgaa acatctgcct tcaacaaaat gcgggccttc agcaaccgcc gggccgggcc
     1261 tttccccttg cggatcaagg tttcaagctg cgaacgttcc tccccgccca acctcacaac
     1321 gtacttcttt accgaaatct ccttcccagc catgatcgcc tccatcgtca atagtggcgc
     1381 tgaaagcgaa tcgcaaaatc ctttcaaatt ggttgaagcg gccgactagg tggagtgagg
     1441 cattcctgcc acaggttacc aagaccatgc gtacctgccc acttagcgcc tggaagttct
     1501 gcaacatttg cgattatcta gcgacttggc attcgaatcg tctgccggag cggccagccg
     1561 caacaagaac caggcccgac ggacttgcat gcgtgaggag aactatggcg tcacgtgtat
     1621 tcgcgtgtgt cgctgctgct tcattctcgc tgatgctcgc cggctgtaca atgtacgagc
     1681 ctgcatcgg
//
LOCUS       DATDHO010000563         6929 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_469476, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000563 DATDHO010000000
VERSION     DATDHO010000563.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6929)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6929)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6929
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469476"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..96)
                     /locus_tag="VIY07_10785"
     CDS             complement(<1..96)
                     /locus_tag="VIY07_10785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEY6382274.1"
                     /translation="MVRFENVGLRYGLGPEVLRDLSFRIDPHSFQF"
     gene            476..1216
                     /locus_tag="VIY07_10790"
     CDS             476..1216
                     /locus_tag="VIY07_10790"
                     /inference="COORDINATES: protein motif:HMM:NF038353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxLYD domain-containing protein"
                     /protein_id="HEY6382275.1"
                     /translation="MDAETGAEGTFIGVLRPDHPVNSGGVEVEHRPAGDEAGDSSVTR
                     EHPVAAETPATVIDAPSVVPSIEPSANSADEADADEIENFAARRKRLQARRKQARRSS
                     RWTALILVLFAFNVALVGARSEVVRFFPQTASLFAAVGLPVNLRNLKFENLRISKEAQ
                     EGLSSLIVEGIIVSVTNRPVEVPRLRFAARDAAGQEVYTWTALPSRSILGPGEKLDFR
                     SRFVSPPDNAVDVMVRFAGPQDAVPAAK"
     gene            complement(1233..3758)
                     /locus_tag="VIY07_10795"
     CDS             complement(1233..3758)
                     /locus_tag="VIY07_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02302 family protein"
                     /protein_id="HEY6382276.1"
                     /translation="MDEPKNQPLEQESTARLLLARALARARGSLFWERLWPALAAVAT
                     MLGLFLAFSWAGLWLALPPLARAIGLFIFAVAIVVSALPLLIVRLPSVYDGLRRLDRG
                     TGEAHRPATAVADRIAANNNDPVAQALWQAHVERALRSARKFRAGWPAPRLSLRDPMA
                     FRALVVIVVVASFFAAGGERTKRIAAAFDWRGVVAPANFRIDAWVTPPGYTGRPPVML
                     VGLRPGETAQPMPSVAVPVGSQLVIRATGKVGFDIAHHGAIEPAPPEARAPLPPGTEE
                     RRLLIKGDGSAAVHGVLGSDLVWNFTAIPDRAPNIELIKDPERQARGALRLDYKMDDD
                     YGVVEAKATFALKDQQVSEKPPRSLFSAPDYALSLPQARTKSGTAQTTHDLTEHPWAG
                     ADVTMTLTARDEAGNEGRSQAYELQLPQRVFVKPLARALIEQRRILALDADTKPLVLT
                     ALDALAIAPERFTPEPGIYLGLRSIFHDLDHAKSDDALREVVARLWDMAVQLEDGNVS
                     QAEQALRQAQEALRQALERGASDEEIKKLMEQLRAAMDKFLQALAEEMRKNPQQLSRP
                     LDRNTRTLSQQDLKSMLDRLENLARSGNKDAARRLLEELQSMLENLQMARPGASGDDD
                     DDDMMSALDELGDMIRKQQQLRDKTFRQGQDNRRDRQRGQQGQSDRQMGDLREDQQGL
                     KDRLNKLLEQLRQRGMGQPGQQGEGNEMGQLGDAGEAMGQAEGQLGDGDADSAVDSQG
                     RALDSMRKGAQGMARSMQQQGAGPGPNGRPGRGQARAQQDTDPLGRPMRGRDYGDDLT
                     VKVPGEIDAQRARRILEELRKRFGESFRPQLELDYIERLLKDF"
     gene            complement(3845..5107)
                     /gene="lysA"
                     /locus_tag="VIY07_10800"
     CDS             complement(3845..5107)
                     /gene="lysA"
                     /locus_tag="VIY07_10800"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEY6382277.1"
                     /translation="MHHFAYRGGVLHAEAVNIETIAAAVGTPFYCYSTATLARHYKVF
                     AGAFADVSALVCYAMKANSNQAVIRTLAKLGAGADVVSGGELKRARAVGIPPDKIMFS
                     GIGKTASELALAVDEGILCVNVESEPELELLSSVAASKGRTAPISVRVNPDIDAKTHH
                     KIATGKAENKFGIPISRAREIYMHAAKLKGLEVVGVDMHIGSQITELDPFDNAFALLA
                     DFVRVLRSDGHSIAHVDLGGGLGIPYRDDNEPPPHPDAYAQVVKRATQDLDCRLIFEP
                     GRLLVGNAGILITRVLFVKHGEAKNFVVVDAGMNDLIRPTLYDAHHEVWPVTQSSSTR
                     RFRADIVGPVCESGDFLAVNRDMLEPAGDALLAVMSAGAYGAVQAGTYNTRALVPEVL
                     VNGEQWALVRPRLEVDQLIALDRMPDWL"
     gene            complement(5115..5360)
                     /locus_tag="VIY07_10805"
     CDS             complement(5115..5360)
                     /locus_tag="VIY07_10805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEY6382278.1"
                     /translation="MRHSDHPVLRLAVIGALVASIGLSACGRKGPLDPPPGASLAGQQ
                     ITPEDIDTRDKPVMGRDGKPIAPPGQNKRIPLDVLLN"
     gene            complement(5414..6805)
                     /gene="argH"
                     /locus_tag="VIY07_10810"
     CDS             complement(5414..6805)
                     /gene="argH"
                     /locus_tag="VIY07_10810"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEY6382279.1"
                     /translation="MSNKMWGGRFTSGPGAIMEEINASIDFDRHLYRQDIAASKAHAD
                     MLAKQGIITADDAKKITHGLDTILSEIEAGKFSFKRALEDIHMNVEGRLSELIGEAAG
                     RLHTARSRNDQVATDFRLWVRDIVDALDAALAAYQRALAEKALTHAGTLMPGLTHMQT
                     AQPITFGHHLLAYVEMAARDRGRFSDARKRLNESPLGAAALAGTSFALDRDMTAKALG
                     FDRPMSNSLDAVSDRDFVIEVLAAAAITSVHLSRLAEEIVIWTSPLTGLVKLSDKFTT
                     GSSIMPQKRNPDAAELVRAKTGRVIGALNTLLVVMKGLPLAYAKDMQEDKEGAMDALD
                     ALSLSLAAMTGMVADLEPDATRMKKAAGEGYATATDLADWLVRALKIPFREAHHVSGR
                     IVAKAAAAGVPLHRLPLSVMREVEPRIDEDVFTVLSAGRSVKSRTSFGGTAPKNVRGQ
                     AKKWLRKLEKQKS"
BASE COUNT         1293 a         2169 c         2143 g         1324 t
ORIGIN      
        1 gaactgaaag gaatgcggat cgatgcggaa cgagaggtcc cgaagcacct ccggtcccaa
       61 cccatagcgc aagcccacgt tctcgaatcg gaccacccac ccctctccga caatctttgt
      121 ttagcaccgc cgaatcaccg cccgccacgt ggtcctccga aaagcccacc gagagcctgc
      181 aaggcatccg gaagagcact ttttacaaga ttatgacgac cctgccatag caaaggggcc
      241 aaaccgggcg ggcaatccgg ggaaaccgac ggcccgccat ggtttccgat ccgttaacgg
      301 acggctggta cggtggcacc cgaaaacacc catgctgatc gcctgtccgc actgctcaac
      361 atcctatgcc atcgacccaa cctcgttggg ctcggcgggg cgcaccgtcc gttgcgtgcg
      421 gtgcaaaagc acctggttcg cggatggtgc aaaaccggag cccgaattgg ccgccgtgga
      481 tgccgagact ggtgccgaag ggactttcat cggcgtgctc cgccctgatc atccagtcaa
      541 ttcgggcggt gtcgaggttg aacatcggcc tgctggagac gaagcgggag attcctccgt
      601 cacgcgagag catccagtcg ctgcggagac gccggccacc gtcatcgatg cgccgtcggt
      661 cgtaccgtca atcgaaccat cggcgaattc cgctgacgag gccgatgcgg acgaaattga
      721 aaacttcgct gcgcgccgca agcgcttgca ggcacgacgc aagcaggccc gacgctcgtc
      781 ccgttggacg gcacttatcc ttgtgctgtt tgcgttcaat gtcgcactgg tcggagcgcg
      841 tagcgaggtc gtacgatttt tcccgcagac ggcatcgctg tttgccgcgg tcggactgcc
      901 ggtcaatctg cgcaatctca aattcgagaa cttgcgtatt tcgaaggagg cgcaggaggg
      961 tctgtcctcc ctgatcgtgg aaggcatcat cgtcagtgtc accaacaggc cggtcgaggt
     1021 gccgcgcctt cgcttcgcgg cgcgggatgc ggcgggacag gaagtctaca cttggacggc
     1081 gttgccgagc cgcagcattc tcggccccgg agaaaagctg gacttccgca gccggtttgt
     1141 atcgccgccc gacaatgcgg ttgacgtgat ggtgcggttc gcaggtccgc aggacgcagt
     1201 gccggcagca aaataagctc cggtctcagc gctcagaagt ccttgagaag ccgctcgata
     1261 tagtcgagtt caagctgtgg gcggaagctc tcgccgaaac gtttgcgcag ctcctccaga
     1321 atgcgcctcg ctcgctgcgc gtcgatctcg ccgggcacct tcacagtaag gtcgtcgcca
     1381 tagtcgcgac cgcgcatcgg ccggccgagc ggatcggtat cctgctgggc acgagcctgc
     1441 ccgcgtccgg gtcggccatt cggtccgggt ccggcaccct gctgctgcat cgatcgcgcc
     1501 atgccttggg cgcctttccg catggaatcg agcgcgcgtc cctgactgtc gacggcgctg
     1561 tcggcatccc cgtccccgag ctgaccttcc gcctgaccca tggcctcgcc ggcatctccc
     1621 agctggccca tctcgttgcc ctcgccttgc tgtccgggct ggcccattcc gcgttggcga
     1681 agctgctcaa ggagcttgtt gagccggtcc ttcagtcctt gctgatcctc acgcaagtcg
     1741 cccatttggc ggtcggactg gccttgttgc ccccgttgcc tgtcgcgtcg attgtcctga
     1801 ccctggcgaa aggtcttgtc gcgcagctgt tgctgcttcc ggatcatgtc gcctaattcg
     1861 tcaagggccg acatcatgtc gtcgtcgtcg tcgtcgcctg aggcgccagg gcgggccatc
     1921 tgcaggtttt cgagcatcga ctgcaattcc tcgagcagcc ggcgtgcggc atccttgttg
     1981 cctgagcgcg cgagattctc cagccgatca agcatgctct tgaggtcttg ctggctgagc
     2041 gtgcgagtgt tgcggtcaag cgggcgcgaa agctgttgcg ggttcttgcg catctcttcc
     2101 gcaagagctt gcaggaactt gtccatggct gcgcgcagct gttccataag cttcttgatt
     2161 tcttcgtcgc tcgcgccgcg ctcaagcgcc tgacgaagcg cttcctgcgc ctggcgcagc
     2221 gcctgttcgg cctgtgagac gtttccatcc tcgagctgga ctgccatatc ccacagccgc
     2281 gcgaccactt cgcgcagcgc gtcgtcactc ttggcgtggt ccagatcgtg aaagatcgaa
     2341 cgcaggccga gatagatacc gggctcgggg gtaaatctct ccggcgcaat agcgagggcg
     2401 tcgagagcgg tgagaaccaa tggtttggtg tcggcgtcga gcgccaggat gcgccgctgc
     2461 tcgatcagcg cgcgcgccag aggcttgacg aaaacgcgtt gcggcaactg taactcgtac
     2521 gcctggctgc ggccctcgtt gccggcctcg tcccgtgccg tgagcgtcat cgtcacatcg
     2581 gcaccagccc agggatgttc ggtaaggtcg tgcgtggttt gcgccgtccc ggatttggtg
     2641 cgggcttgcg gcagactgag ggcatagtcg ggtgccgaaa acagcgacct cggcggcttt
     2701 tcggacactt gctggtcctt gagcgcgaac gtggctttcg cttccacaac gccgtagtcg
     2761 tcgtccatct tgtaatcaag acggagcgcg ccacgcgcct gccgttccgg atccttgatc
     2821 aattcaatgt tcggcgcgcg gtcgggaatt gcagtgaaat tccagaccag atcgctgccg
     2881 aggacgccat gcaccgcggc agaaccatcg cccttgatca acagccgacg ttcctcggtc
     2941 ccgggtggaa gcggcgcacg cgcctcgggt ggcgccggct caatcgcgcc atggtgcgcg
     3001 atatcgaaac ctaccttgcc ggtggcgcgg atcacgagct gactgcccac tggcacggct
     3061 accgaaggca taggctgcgc ggtttccccc ggacgcagac ccacgagcat caccggaggc
     3121 cggccggtgt aaccgggcgg tgtgacccag gcatcgatgc ggaaattggc gggcgccacc
     3181 acgccgcgcc aatcgaaagc cgcggcgata cgttttgtgc gctcgccgcc ggcggcaaag
     3241 aaactcgcga ccaccacaat gacaacgagc gcacggaatg ccattggatc gcgcagcgag
     3301 aggcgtggag caggccagcc agccctgaac ttgcgcgccg accgaagcgc acgctcgaca
     3361 tgcgcctgcc agagcgcctg cgccacaggg tcattgttgt tggcagcaat gcggtcggca
     3421 accgccgtcg ccgggcggtg cgcttcaccg gtgccgcgat cgagccgtcg aagaccatcg
     3481 tacacactcg gcagccgcac gatcagcaat ggcaaagccg aaacgacaat ggcgactgcg
     3541 aatatgaaca ggccgatggc gcgggccagc ggcggcaatg ccagccacaa accggcccac
     3601 gagaaggcca aaaacaatcc gagcattgtt gccacggcgg cgagagccgg ccacagcctc
     3661 tcccagaaga gactgccccg cgcgcgcgcc aaggcccgcg cgagcaaaag tcttgcggtg
     3721 ctctcctgct ccaaaggctg gttttttggt tcgtccaaaa ggcactccgt cgctcaggct
     3781 cgggagaatc tgtgcatcag gctaacacgc gccaaccctg ccggccacgc gtgtatttat
     3841 gcgcttaaag ccaatccggc atgcgatcga gcgcaattaa ttggtcaact tcaaggcgcg
     3901 ggcggacaag ggcccattgc tccccgttga ccaagacttc gggcaccagg gccctggtat
     3961 tgtaggtgcc agcctggaca gcgccgtacg cgcccgcgga catgaccgcc aacagtgcgt
     4021 cacccgcggg ttccagcata tcgcggttaa cggccaggaa gtctccgctt tcgcaaaccg
     4081 gtccgactat gtcggcacga aaacgtcggg tcgaggacga ttgtgtcacc ggccaaacct
     4141 cgtgatgcgc gtcgtataac gttgggcgaa tgagatcgtt cattccggcg tcaacgacaa
     4201 cgaagttctt tgcctcgccg tgcttcacga ataacacgcg ggtgatcaaa ataccggcat
     4261 tgccgacgag aagacgccca ggctcgaaaa tcaaacggca atcgagatcc tgggtcgccc
     4321 gcttgaccac ttgtgcatag gcgtcggggt ggggcggagg ctcattgtca tcgcggtacg
     4381 ggatcccaag cccaccgcca agatccacat gtgcaatact gtggccgtcg gatcgcaaaa
     4441 cgcgcacgaa gtcagccagc aatgcgaagg cattgtcgaa cgggtccagt tcggtgatct
     4501 ggctgccaat atgcatgtcg acaccgacaa cctcgaggcc cttgagcttg gcggcatgca
     4561 tgtagatctc gcgtgcgcgg ctgatcggaa taccgaactt gttctcggct ttgccggtcg
     4621 caatcttgtg atgcgttttg gcatcgatat cgggattaac gcgcaccgaa atgggtgccg
     4681 tgcggccctt cgacgcggcg actgacgaga gcagttcgag ctcgggctcg gattcgacat
     4741 tgacgcaaag aatgccctca tcgacggcaa gtgcgagctc cgatgcggtc ttgccaatgc
     4801 cggagaacat gatcttgtct ggaggaatgc cgaccgctcg ggcgcgcttg agttctccgc
     4861 ccgacacgac gtcagcgccg gcgcccagct tggcaagcgt tctgatcacc gcctgattgg
     4921 aattcgcctt cattgcatag catacgagcg cgctgacatc ggcgaacgcg ccggcaaaaa
     4981 ctttgtagtg acgggcgagt gttgcggtcg aatagcaata aaacggtgta ccgaccgcgg
     5041 cggcgattgt ttcgatgttc accgcctcgg cgtgcaacac gccgccgcga taagcaaagt
     5101 gatgcatggc acgctcagtt gagcagaacg tcgagaggga tacgcttgtt ttggcccggc
     5161 ggcgcgatcg gctttccatc acgtcccatg accggcttgt cccgggtgtc gatgtcttcc
     5221 ggcgttattt gttggcctgc gagcgacgcc ccgggcggcg gatcgagtgg tcccttgcgt
     5281 ccgcacgccg acaagccgat cgacgcgacg agggcgccga tcacggcaag acggagaacc
     5341 gggtggtcag aatgcctcac ggcgagcact ccttgcttgg agaacgatag caaaacagag
     5401 aaacaaggcg aagtcaggat ttctgttttt cgagcttgcg cagccatttt ttggcctgcc
     5461 cgcgcacatt tttgggcgcg gtaccaccaa agctcgtccg gctctttacc gagcggccgg
     5521 ccgagagaac ggtgaatacg tcctcgtcga ttcgcggttc cacctcacgc ataaccgaga
     5581 gcggcagccg gtgcaggggg acgcctgcag ccgccgcctt ggcgacgatc ctgcccgaaa
     5641 cgtggtgcgc ttcgcgaaat ggaatcttca acgccctcac aagccagtcg gcgagatcgg
     5701 ttgcggtggc gtagccctcg ccagcggcct tcttcatccg cgttgcgtcg ggttcgagat
     5761 cggccaccat gccggtcatc gctgcaagcg acagcgagag cgcgtcgagc gcgtccatcg
     5821 cgccctcttt gtcctcctgc atgtccttgg cgtacgcaag ggggagacct ttcatcacga
     5881 ccagcaaggt attgagcgcg ccgataaccc ggcctgtctt agcccgcacc aactcggcgg
     5941 catccggatt gcgcttttgc ggcatgatcg atgagccggt cgtgaacttg tccgacagct
     6001 tgaccaagcc ggtgagcggc gaggtccaga tcacgatctc ctcggcaagt cgcgagagat
     6061 gcacggaggt gattgcggcg gctgcaagga cttcgatgac gaagtcgcgg tcggaaaccg
     6121 catcgagcga attcgacatc ggccgatcga agccgagcgc cttcgcggtc atgtcgcggt
     6181 cgagcgcgaa cgaggtgccg gcaagtgccg cggcgccgag tggagattcg ttcaggcgct
     6241 ttcgcgcatc cgagaatctt ccgcggtcgc gcgccgccat ctcgacgtag gcaagcaggt
     6301 gatgcccgaa agttatcggc tgcgccgttt gcatatgcgt aagcccgggc atcagggtgc
     6361 ctgcatgcgt cagagccttt tcggcgagcg cacgctggta ggcggccagg gccgcatcga
     6421 gcgcatccac gatatcgcgt acccaaagtc tgaaatccgt ggcgacctgg tcgttgcgcg
     6481 agcgtgcagt gtgcagccga cccgccgcct cgccgatcag ctccgatagc cggccttcca
     6541 cattcatgtg gatgtcttcc agcgcacgct tgaacgagaa tttgcccgct tcgatctctg
     6601 acaggatcgt gtctagaccg tgagtgatct ttttcgcatc gtcggccgta atgatgcctt
     6661 gcttggccag catgtccgca tgggccttgg atgcagcgat gtcctgacga tagagatgcc
     6721 ggtcaaaatc gatggaggcg ttgatttcct ccatgatggc gccggggccc gacgtgaacc
     6781 gcccacccca catcttgttg ctcatggcat atccaccgaa ccgctcatga ccgagtccca
     6841 ggccagcttc gccaaaaaac gcctcgccat ggttttggcg ggcggaatcg ccggagtcgt
     6901 cgttgggctt gcgggggtat acgggattg
//
LOCUS       DATDHO010000564         3489 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_126721, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000564 DATDHO010000000
VERSION     DATDHO010000564.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3489)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3489)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3489
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_126721"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(163..1002)
                     /locus_tag="VIY07_10815"
     CDS             complement(163..1002)
                     /locus_tag="VIY07_10815"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6382280.1"
                     /translation="MLIVMGPVVGVPTTDLFAAAVFPGLVLSGLYIVYCLARSYIDPS
                     VGPPLREDERLASKAAVLKELALGVVPVIIVILATLGVILMGIATPTDAGACGAFAVL
                     VMTVVSRTISWQKLKNSVYATLEVSCMILLLVAASNYFGAVFSRLGAANMIAEALLNL
                     PLPPMLMLVLILAVIFLLGWPLEWVPIVLIVVPILLPLVQKLGIDLVWFCTLVAVCLQ
                     TAWLSPPVALSAYFLQGVVPDWKLSDIYAGMMQFMVLQVIGLGLVLLFPQLALWLPAA
                     LRN"
     gene            complement(959..1480)
                     /locus_tag="VIY07_10820"
     CDS             complement(959..1480)
                     /locus_tag="VIY07_10820"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6382281.1"
                     /translation="MSEEWIGILSLVILFGAIFIGFPIAFTLIAIALGVGYAALGPIA
                     LHLMTIQFFAVMKETSLASVPFFLFMGFLLEQSGLMERLFRGIQQLLAGVRGSLYLAV
                     LITATIFAAATGIVGSSVTLLGVMAAPSMTRSKYDVRLSAWGDHRGRHSGYSHSAVRN
                     VDRDGAGGWSPDD"
     gene            complement(1473..2045)
                     /locus_tag="VIY07_10825"
     CDS             complement(1473..2045)
                     /locus_tag="VIY07_10825"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY6382282.1"
                     /translation="MTIQASPGLVRAVNFFDGISLWSGRIVAWLILPMVMSLVWEVFA
                     RYFLNAPTIWAYDMTYILYGSFFMLGSAYTLLRGKHIRTDNFYGQWSTRRQGLVDAVC
                     YVVLFFPPLLALLYVTWDYFWVSFMRGERVVSSPWMPIIYPLKFTMPVTCVLLLLQGV
                     AEFLRSVHAATTGVWLPRPSLMPERIVADV"
     gene            complement(2120..3214)
                     /locus_tag="VIY07_10830"
     CDS             complement(2120..3214)
                     /locus_tag="VIY07_10830"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY6382283.1"
                     /translation="MMLRKAFAAFVALVFTAYASAALAQQKVRMQTAVPSASIYFELL
                     KRYADRVDKMSSGRVKIEVLPDGAIVPAFEILDAVDKGIVDAGYAWTHYWSGKHPAAG
                     IFSNPMAGAGAGLDQLSHVAWMLEGGGGKLYDRFYSEILKVNVVPLMVQPMGPDPLGW
                     FKRPIKDVADFKTMKYRAPPGITGEIFKEMGISAVALPGGEIVPAAQRGTIDAAEWIG
                     PADDRNLGLHTIWKNYYLQGLHQSTDIGEVIFNKTWWNKQPADVQEILRGAALASMME
                     TYSFNVYRNAQAIVELREKHGVQIMDTPKEFYPEFVKATNIVLDRYAAKDPFFKEVLD
                     SQRNFAKTVVPYWTKILDLYSELGNSALKK"
BASE COUNT          849 a         1041 c         1000 g          599 t
ORIGIN      
        1 tggatctacc gatgacgcca caacgtgtgt ggctggctct ccaacgggca ccttagtaac
       61 actcggggtt gcgaacgaac ggttttctca attgcggcgg cagctgcagc gatttccgct
      121 gataaccggc cacgcgaagg acaatgcgaa tgcgactcac cgtcaatttc ttaatgccgc
      181 cggcagccag agcgcgagtt gtgggaaaag gagaacaagg ccaaggccaa tgacttgcag
      241 caccatgaac tgcatcatgc ccgcgtagat gtcgctgagc ttccaatcgg gcacgacacc
      301 ctggagaaaa tatgctgaca acgctaccgg aggcgaaagc caggcagtct gcaggcacac
      361 cgcaacgagc gtacagaacc agacgaggtc gatgccgagc ttctgaacca gcggcagcag
      421 gatcgggacc acgatcagca cgatcggaac ccactccagc ggccagccaa ggaggaagat
      481 caccgccagg atgaggacaa gcataagcat cggcggcagc ggcaggttga gaagcgcttc
      541 ggcgatcatg ttggccgcgc cgagtcggga gaacacggcg ccgaaataat tggacgccgc
      601 taccagcagc aaaatcatgc acgacacttc cagtgtcgcg tagaccgaat tcttgagctt
      661 ctgccagctt atcgtccgcg agacgacagt catcacaaga acagcaaaag cgccgcatgc
      721 gcccgcgtca gtgggcgtgg ctatgcccat cagaatgacg cccagcgttg ccaggatgac
      781 gatgatcacc ggcactacac cgagcgcgag ctccttgagc accgcagcct tggaggctag
      841 ccgctcgtcc tcccgaagag gcgggccgac ggaaggatca atatagctgc gcgcgagaca
      901 atagacgata taaaggccgg acagcacgag gcccggaaaa accgcagcgg cgaagagatc
      961 agtcgtcggg actccaacca ccggccccat cacgatcaac attacggacg gcggaatgag
     1021 aatacccaga gtgccgcccg cggtgatcgc cccaagcaga cagccgcacg tcgtacttgc
     1081 tgcgggtcat gctgggcgcc gccatgacgc cgagcagcgt caccgatgag ccgacgatgc
     1141 ccgtggcggc ggcgaatatc gtggcggtga tgaggacggc gagatagagc gaccctctta
     1201 cgccagcgag caactgctga atgccccgga acagccgctc catgagtccg gactgctcaa
     1261 gcaagaaccc catgaacagg aaaaaaggca cggaggcgag cgaggtctcc ttcatgaccg
     1321 caaagaactg aatggtcatg aggtgcagcg cgatcggtcc cagggcggcg tagccgacgc
     1381 cgagcgcaat cgcgatgagg gtgaacgcta tgggaaagcc gatgaaaatc gccccgaaca
     1441 ggatcaccaa agaaagaatg ccgatccatt cttcagacat cggccactat ccgctcaggc
     1501 atcaatgatg gacgcggcag ccacacgccc gtcgttgcgg catgcaccga ccgcaaaaac
     1561 tcggcgacgc cctgaagcag aagcagaacg caggtcaccg gcatcgtgaa tttcagcgga
     1621 tagattatcg gcatccaggg acttgaaacg acgcgctccc cgcgcatgaa cgagacccag
     1681 aaatagtccc aggtcacata gagaagcgcg agcaatggcg gaaagaacaa gacgacgtaa
     1741 cagacggcat cgaccagccc ctgccggcgt gtcgaccatt ggccgtagaa attgtcggta
     1801 cggatatgct ttccacgcag cagcgtgtag gcagatccga gcatgaaaaa tgagccgtac
     1861 aatatgtacg tcatgtcgta ggcccagatg gtcggtgcgt tcaagaagta gcgcgcaaac
     1921 acctcccaca cgaggctcat gaccatcggg aggatgagcc atgcaacgat cctccccgac
     1981 cacaaactta tcccgtcgaa aaaattaaca gcgcgcacga gaccaggcga cgcctgtatc
     2041 gtcatgtacg accccctgcc tcgcggcttg atgtaaaaac gaagacggaa gcccgcgggc
     2101 gcgggcttcc gaaagcgaat tatttcttga gtgccgagtt tccgagctcg gaataaaggt
     2161 cgaggatttt cgtccagtac ggcacgaccg tcttggcaaa gttgcgctgg ctatcgagca
     2221 cttccttgaa aaacggatcc ttggcagcgt agcgatcgag cacaatgttg gtcgccttga
     2281 cgaactccgg atagaactcc ttcggcgtgt ccattatctg cacgccgtgt ttttcgcgca
     2341 gttcgacaat ggcttgcgca ttgcgataga cattgaagga gtaggtttcc atcatcgacg
     2401 caagcgccgc gcccctgagg atctcctgca cgtctgccgg ctgcttgttc caccaggtct
     2461 tgttgaaaat cacctcgccg atgtcagtcg actggtgcag cccctgcagg tagtagttct
     2521 tccagatagt gtgtaacccg agatttcggt cgtcggccgg gccgatccac tcagcggcat
     2581 cgatcgttcc gcgctgcgca gccggaacaa tttcgccgcc aggcaacgcc acggcagaga
     2641 tgcccatttc cttgaagatt tcgcccgtaa ttccaggcgg cgcgcgatac ttcatcgtct
     2701 tgaagtcggc gacatccttg atcggccgct tgaaccagcc gagtggatcc ggccccatcg
     2761 gttgaaccat cagcggcacg acgttgacct tgagaatctc tgagtagaaa cggtcgtaaa
     2821 gcttcccgcc cccgccttcc agcatccagg cgacatggga caactggtcc agaccggcac
     2881 ccgcgcccgc cattggattg gagaagatgc cggcggcggg gtgcttgcct gaccaataat
     2941 gtgtccaggc gtagccggca tcgacgatgc ccttatccac tgcatcaaga atttcgaacg
     3001 ccgggacgat tgcaccatcg ggaagcactt cgatcttgac ccgcccgctc gacatcttgt
     3061 cgacgcggtc ggcgtaacgc ttcaacagtt cgaagtagat gctggccgag ggtaccgcgg
     3121 tctgcatccg aaccttttgc tgcgccaacg cagcgcttgc gtaagcggtg aaaacgagcg
     3181 caacgaacgc tgcaaatgcc tttctcagca tcatgagatc gcctccctaa ccaaagaaga
     3241 aagcctccta cttttgtcca agacacgcaa gcgcgccgat gcggggtctt atgccgcgag
     3301 aactaaactc cggcgtcaag tcaacaactt tcggatttat gctccaaacg cccgcgaaag
     3361 acatgccggt cccgcaaggg cgtgagattg gttgatgcaa tacgcgtgcg ttgagtcgcc
     3421 gagggcgccg cgtaggccac catcagctct cctgagaggg cgtcaaccaa tgggcaggac
     3481 cctcgcatc
//
LOCUS       DATDHO010000565         1940 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_225239, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000565 DATDHO010000000
VERSION     DATDHO010000565.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_225239"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..172
                     /locus_tag="VIY07_10835"
     CDS             <1..172
                     /locus_tag="VIY07_10835"
                     /inference="COORDINATES: protein motif:HMM:NF014961.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="vitamin B12 dependent-methionine synthase
                     activation domain-containing protein"
                     /protein_id="HEY6382284.1"
                     /translation="LYFSHPQSAYFGVGKIERDQVEDYAKRKNWSINECERWLAPILN
                     YETHASPSIVAA"
     gene            743..1720
                     /locus_tag="VIY07_10840"
     CDS             743..1720
                     /locus_tag="VIY07_10840"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6382285.1"
                     /translation="MQHLRQFLLCLVLAIAYFVAPVAHAQTSQSWPQRPVRFIIPLGP
                     GSGVDITARLLADKLAAKWGQPVVVENRPGGDAFVAITAVLSAHDDHMLLFAPASTFT
                     AHPLLHEKLPYDPKELTPIARVTNTLIALGVPADLKVGSVKELVARIRTEPGKLNYAS
                     VTGANDLLFAAFLKLEKLDMAKVPYKDTVLAINDLAEGRIHAFVGAYAIMRPRVQAGK
                     VKVIALTNRQHAKALDDIPTAAEAGFKSLEFDGLVGLLGPREVSQPVRDRIAADVREV
                     VSDPEVESKLSATGQVVNPGTPAEFAAAMEDQLQTVRRIGETLGIKPAQ"
BASE COUNT          409 a          580 c          562 g          389 t
ORIGIN      
        1 cctctacttc agccatccgc agagtgcgta tttcggcgtc ggcaaaatcg aacgcgatca
       61 ggtcgaggac tatgcgaagc ggaaaaattg gtcgatcaac gaatgcgagc gctggctggc
      121 gccaatcctc aactatgaga cgcatgcttc gccgagcatc gtcgcggcct aagcagtgtc
      181 actccaaaaa gcgagcaccg gagagtgcgc gctctccggt gctgtaacag tttgccggat
      241 caaatccggt attgcttgct tggagttgtc gtcggcctcc tgaactcaga atgcgcccag
      301 caaaattgcg cctacaaaag caaacacggc gcatactgct agcagatcga gcctcaaggt
      361 aaggtccacg gcatctgcct cccttgttag aggacgaagg ctagcacaaa aacaaacgac
      421 ggccggaggt agttgcacgc taaccttgca attgtgcatg agcctcccgg ccgccaatac
      481 atagccgcaa caaccgattg atcgcgcgat gcaaacaaac tccacgtgca gatttttggc
      541 actgcacaaa tgcagtcggg ccgagttttt tgatggcaat tttacggcaa ataccggtgc
      601 tttacggaac gacgtgactc agtgacgcgc cagcgcttgg cgttcagaat gattttattc
      661 cgttattgcg caatttggcg cgttatgacg tgatccggcc caacacacga ttgtccgttg
      721 cggactattg ccgggagtga ccatgcagca cctgcgccaa ttcttgctct gccttgttct
      781 cgctatcgcg tatttcgtag caccagttgc gcacgcgcaa acatcacagt catggccgca
      841 gcgcccggtg cgattcatca ttccactggg tcctggttcg ggcgtcgaca tcacggcccg
      901 tctgctggcg gacaagcttg ccgcgaaatg gggccagccg gtcgtggtcg agaatcgtcc
      961 cggtggcgat gctttcgttg ccatcaccgc ggttctaagc gcgcatgacg atcacatgct
     1021 gctgtttgcg ccggcctcca cgttcaccgc tcacccgctg ctgcatgaaa agctgcccta
     1081 cgatccgaaa gagcttacgc ccatcgcgcg cgtgaccaat acattgattg cgctcggcgt
     1141 tccggccgat ctcaaggtcg gcagcgtgaa ggagctggtt gccaggatca ggaccgagcc
     1201 aggcaagttg aactacgcct cggtcaccgg ggcgaacgat ttgctgtttg ccgcttttct
     1261 gaaactcgag aaactcgaca tggccaaggt gccttacaag gacaccgtcc tagccatcaa
     1321 cgatcttgcc gaaggacgta tccacgcctt cgttggagcc tacgcaatca tgcggccgcg
     1381 cgtgcaggcc gggaaggtca aggtgatcgc cctgaccaat cgccaacatg ccaaggccct
     1441 ggacgacatc cccaccgcgg cggaggcggg cttcaaatcg cttgaattcg acgggctggt
     1501 cggcctgctc gggccgcgcg aagtcagcca gccggttcgc gaccgcatcg cagccgatgt
     1561 gcgcgaagtg gtcagcgacc ccgaggttga atcgaaactc agcgccacgg gtcaggtcgt
     1621 caatcccgga acgcctgccg agttcgcggc ggcgatggag gaccagctgc agaccgttcg
     1681 acggatcggt gaaacgctgg gcatcaagcc tgcacaataa gacgacgccg attcaagtag
     1741 tgccggctcg actggcaagg attccttatc cttaacgaaa ttgccagcgt gcagcgttga
     1801 agcctcgtta aaggaactgc tcgcattttt gcgagcatga aaagcggcgt ggccctctgt
     1861 ctcgcgggcg caggcgtgct gctggcgctt gctggctgcg ggcgcggctt catgtccggc
     1921 gagcgcgcgc cctggcgcca
//
LOCUS       DATDHO010000566         5445 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_423784, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000566 DATDHO010000000
VERSION     DATDHO010000566.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5445)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5445)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5445
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_423784"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            553..774
                     /locus_tag="VIY07_10845"
     CDS             553..774
                     /locus_tag="VIY07_10845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382286.1"
                     /translation="MAYAPVTVAKSGFVTNTPTRNRFGFFRRLFNAMMVARQRQVERE
                     IARYLSTHRFSDEAEREIERRFLSAPPHV"
     gene            793..945
                     /locus_tag="VIY07_10850"
     CDS             793..945
                     /locus_tag="VIY07_10850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382287.1"
                     /translation="MSTLDIHRSSSALPAGLTRLVALLNALLGAFVEAQRHAAAAHKR
                     YPFAEW"
     gene            complement(953..1249)
                     /locus_tag="VIY07_10855"
     CDS             complement(953..1249)
                     /locus_tag="VIY07_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEY6382288.1"
                     /translation="MPKAYWVVTYRSVKNSEAWKAYAKLAVPAIESAGGRFLARSNPA
                     KTYEAGMNERVVLVEFPTLDQAVACHDTPAYKEALKALGTGNVERDMRVVEGVA"
     gene            complement(1280..1792)
                     /locus_tag="VIY07_10860"
     CDS             complement(1280..1792)
                     /locus_tag="VIY07_10860"
                     /inference="COORDINATES: protein motif:HMM:NF024966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY6382289.1"
                     /translation="MNTRDALEDRLRAVEDTLAIYHLIASHPPAADTGTDRYYRDAFT
                     SDGHIDLGGGKGATGNEAIAGIVKTPEHQAAIAGGLCHFAGLPRVVLSGDTAVATSYL
                     QIITPDRHGAPRELSGHGTSIGFRIHCVGANRWELKREKDGWKVTRRTLRPLDGGDDA
                     RALLRQAFAQ"
     gene            2110..2592
                     /locus_tag="VIY07_10865"
     CDS             2110..2592
                     /locus_tag="VIY07_10865"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY6382290.1"
                     /translation="MPDANGSLDALISRHAAANNIPEDVVRRVIKRESGGNPRAVSKG
                     NFGLMQIKLATARGLGYRGTAAGLLDADTNMTYAVKYLAGAYRVANGNTNRAVHYYAA
                     GYYYAAKNKGIPMPSSAQTSDSFGTPRGIKFGSDQKLRAFYDRGTTSWSNAYPRPDSY
                     "
     gene            complement(2642..3481)
                     /locus_tag="VIY07_10870"
     CDS             complement(2642..3481)
                     /locus_tag="VIY07_10870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382291.1"
                     /translation="MLPILRVLPVGGVLLAILILVLALTPPDGSRGPLSSPGVPARGA
                     LSDRDRQAETRQFLIHAALKRADQLSRLRDLPDTPTHSEEPQPELAGLPAERSDADPE
                     ESGSTNATPAVTIPIEIGGPSIEVPIPSPQDIPLTLKQPEQSKTQQETPRRAQRPRRT
                     AVARTQSRPLNFFEILFGQQSASISQQAGSQPYPYPLFGPQQVQQNQYPAYGYQQYQQ
                     PASSSVQTGSQQYQQPAYASQQTGYQQQQQPAHSYQQTGQQRQQPQSGYANQQAGQPT
                     RTR"
     gene            3653..4618
                     /locus_tag="VIY07_10875"
     CDS             3653..4618
                     /locus_tag="VIY07_10875"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6382292.1"
                     /translation="MMKKPDCPIIAIEEHYWDRELAGHFTGPEAGRGNETDERLYDLG
                     SLRLKEMDEAGIDVQVLSHGAPSTQKLGADIAVDLTRQVNDRLAKVCAANPKRFAAFA
                     SLPTADPKAAADELERAVTRLGFKGAMLHGMSNGEFLDLKKFWPIYERAEKLDVPIYF
                     HPSLPHPKVTEIYYQDYAKDFPLVVRPAWGYTVETATQAIRLVLSGVFDAHPNLKIIL
                     GHFGETLPFLVWRIDSSLKRPGQKAMSFRDVFCKNFYVTTSGFFSDPALICCMLEMGV
                     DHILFAVDWPFVMNPPAVKWMENVSISDSDKVKILSGNAKRLLKM"
     gene            5147..5222
                     /locus_tag="VIY07_10880"
     tRNA            5147..5222
                     /locus_tag="VIY07_10880"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5180..5182,aa:Ile,seq:cat)
BASE COUNT         1064 a         1586 c         1670 g         1125 t
ORIGIN      
        1 catcaactga ctcctggatt ggctccccca gatgggcggc gcctgttaaa agccgcggcg
       61 tgcgttttgg cggcaaaaat acggccattt ctcgaaatcg aagttccgga ttgggaggcg
      121 cggctgggtg gagaaacggg atggttggtg cgaacctgtt gcaaagaaag ccgttcgtcg
      181 ccgtgcaagc ggggaccccg tactgctcga ctgacgtgcg cacggacgga atgagcggca
      241 cgaggtcgca gggggaccgc gcgataaatc tcgcgccgtc aacggcactt ggactttttt
      301 aaagcgttac ggctttgcga cacagtgatg accaatgcac cattttgctg tcgttgcagg
      361 cactgtctgc cgcgtttcga atcacaaacg cgcaaatacg acatgcgcac gacacgtctc
      421 atgaatcgcg cgcatggaac ctatgttcgc tcgagcatag tggaagatgc gaacagcatt
      481 tatctacgtg tcaaaacagc aggaaacggg aaacgccttg gagtcgtcga acccgattga
      541 gggagatgat ccatggctta tgctccagtc accgtcgcca agagcggctt cgtcaccaac
      601 acgccaacgc gaaatcgttt cggtttcttt cgccgattat tcaacgccat gatggtcgcg
      661 cgccagcgtc aggtcgaacg tgaaattgcg cgctatctta gtacccaccg cttctcggat
      721 gaggcggagc gggaaatcga gcgccgattt ctgtccgcgc caccacacgt ttgaaaggag
      781 gcaagggata tcatgtcgac tttggatatc catcggtcgt cgtcggcgct gcctgccggc
      841 ttgacccgtc tcgttgcgct gcttaatgcg ctgcttgggg cattcgttga ggcgcagcgt
      901 cacgctgccg cagcccacaa gcgttacccg ttcgcagaat ggtagcggga agctaggcta
      961 ctccttcaac gacacgcatg tcgcgctcga cgttgccggt gcctaatgcc ttgagcgcct
     1021 ccttgtaagc aggagtgtcg tggcaggcga cggcctggtc gagggttgga aactcgacca
     1081 gcaccacgcg ttcgttcatc ccggcttcgt aagtctttgc cggattgctg cgcgcgagaa
     1141 agcggccgcc ggcgctttcg atcgccggca ctgcgagctt ggcataggcc ttccacgctt
     1201 ccgaattttt tacggatcga taggtcacca cccagtacgc cttgggcata acgcgctcct
     1261 ttttggttgt ctgtcaaact tattgcgcga aggcctgtcg cagcaaggcc cgcgcatcgt
     1321 cgccgccgtc gagaggacgc aacgtgcggc gcgtcacttt ccacccgtcc ttttcgcgct
     1381 tgagctccca acgattggcg ccaacgcagt ggatgcggaa accgatcgat gtgccgtggc
     1441 cagacagctc gcgcggcgca ccatgccggt cgggggtgat tatctgcaga tatgacgtcg
     1501 ccaccgcggt atcgccactg agcacaacgc gcggcaagcc ggcaaaatga cagagaccgc
     1561 cggcaatcgc agcctgatgc tcgggcgttt ttacaatccc tgcgatcgct tcatttcccg
     1621 tcgcaccttt tccgccacca agatcgatgt ggccgtcgga ggtgaacgca tcgcgatagt
     1681 aacgatcggt gccggtgtcg gcggcggggg gatgactagc aatcaaatga tagatcgcaa
     1741 gcgtgtcttc gactgcgcgc agacggtcct ccaacgcgtc acgtgtgttc atgtttgttg
     1801 cctccgctgc tcgatgttgg tccgcgagcc tacaacgcga cggtgaccga atgcgaccgc
     1861 caggtcggag cgcgagtcac ttatgcaatc ggtaccgtca ttctgcaatc gcaaacatct
     1921 gctggaattt gtgatcgaac tgctctacgg gagctttgtg aggtcacaaa gttgccggag
     1981 ttgccccaga gcctgtgatg atctcccagc gaggacagcc tcacgatgcg aaaattcagc
     2041 ctgaccacga ttctggttgc cttcgccact gcagcgtcac cggcgttcgc acaaaaactg
     2101 cgggccacca tgcctgatgc caatggcagt ctcgatgcgc tgatcagccg ccatgccgcg
     2161 gcgaacaaca ttcccgaaga tgtggtccga cgcgtgatca agcgcgagag cggcggcaac
     2221 ccgcgcgccg tcagcaaagg gaattttggg ctgatgcaga tcaagctcgc gactgcgcgc
     2281 gggctcggtt acagaggcac cgcggccggt ctgctcgacg ccgacaccaa tatgacatac
     2341 gcggtgaagt atcttgcggg cgcctatcgc gttgccaatg gcaacacgaa tcgcgcggtg
     2401 cactattacg ccgccggtta ctactatgca gcgaagaaca aaggcatccc aatgccttcc
     2461 agcgctcaga cttccgattc atttgggaca ccgcgcggca tcaagttcgg ctcggatcaa
     2521 aagctgcgtg cattctacga tcgcggcacg acgtcgtggt cgaatgccta tccgcggcca
     2581 gactcctact agcctttggc atcgccgggc atcgagattc gagtgccggg gaaatatcgc
     2641 gctagcgagt gcgggtgggc tgaccggcct gttggtttgc gtaaccggac tgtggttgtt
     2701 gccgctgctg accggtctgc tgatagctgt gggccggttg ttgctgctgc tgatagcccg
     2761 tctgctggct ggcgtacgcc ggttgctggt attgctgaga accggtctgc acgctgctcg
     2821 acgccggttg ctgatactgc tgataaccgt acgccggata ttgattttgc tgcacctgtt
     2881 gcggaccgaa caatggatag gggtatggct gcgatcccgc ctgctggctg atcgacgccg
     2941 actgttgacc gaacagaatt tcaaagaaat tgaggggacg agactgggtg cgggccaccg
     3001 cggtgcggcg cggccgctgg gcgcgacgtg gcgtttcctg ctgcgtcttg gattgctccg
     3061 gctgtttcaa tgtcagcggg atgtcctgag gtgaaggtat tggcacttcg atcgaaggtc
     3121 cgccgatctc gatcggaatg gtgacggccg gcgtcgcgtt ggtcgagccg ctttcctcgg
     3181 gatccgcgtc gctgcgctcg gcaggaaggc ccgccagttc aggctgcggc tcttccgaat
     3241 gcgtcggcgt gtccggcaga tctcgcagcc gactaagctg atccgcacgc ttcagcgcgg
     3301 catggatgag gaattgccgg gtttcggcct gccgatcgcg atccgacagc gcgccgcgcg
     3361 cgggcacgcc tggggatgac aaaggcccac gagagccgtc cggcggggtt agggccagga
     3421 ccaggatcaa aatggcgaga agtacgccgc ccactggaag aacacggaga atcggcagca
     3481 tagccgtgca taactgagtc gccgtcatta ccaaagcacc accgccgctg gagcagctta
     3541 gcgaccgcgg ctatgaggca tttttgtcac gtgccgacca cgacgtccgg gacagtgaca
     3601 gtcccagtga cggttgctac caagctgctc caggcgttgg ggaaaaaaga tcatgatgaa
     3661 aaaaccggat tgtccgatca ttgccatcga agagcattac tgggaccgcg agttggccgg
     3721 ccatttcacc ggccccgagg ccggccgcgg caatgagacc gacgaaaggc tctatgatct
     3781 tggcagtctg cgcctgaagg aaatggacga ggcggggatc gacgtgcagg tcctttccca
     3841 tggcgctccc tcgacccaaa aactgggtgc cgatatcgcg gtcgatctga cccggcaggt
     3901 caatgaccgt cttgccaagg tgtgtgccgc caatcccaag cgctttgccg cctttgcgtc
     3961 ccttcctacg gccgatccga aggccgccgc cgacgagctg gagcgtgccg tgaccaggct
     4021 gggcttcaaa ggcgcaatgc tgcacggcat gtcgaacggc gagtttctcg atctgaagaa
     4081 gttctggccg atctacgagc gcgccgagaa gctcgacgtg ccgatctact tccacccgtc
     4141 gctgcctcat cccaaggtga cggaaatcta ctatcaggat tatgccaagg acttcccgtt
     4201 ggtcgtgcgt ccggcctggg ggtacacggt ggagaccgcc acgcaggcaa tccggctggt
     4261 gctatcgggc gtgttcgatg cgcatcccaa tctgaaaatc attctcggcc acttcggcga
     4321 gaccctgccg ttcctggttt ggcggatcga ttcttcgctc aagcggccgg ggcagaaggc
     4381 gatgagtttt cgggatgttt tctgcaagaa cttctacgtg accaccagcg gctttttctc
     4441 cgacccggcg ctgatctgct gcatgctgga gatgggcgtc gatcacatcc tgttcgcggt
     4501 cgactggccg ttcgtgatga acccgccggc cgtcaagtgg atggaaaacg tctcgatttc
     4561 cgactcggac aaggtcaaga ttctgagcgg aaatgccaag cgcttgctga agatgtaaca
     4621 gcggcgtgcc gccggctaaa ttgggttgcg ccgatagtag tcggcatcgg ctggcgattt
     4681 gctgccagtc cttgttaccg cgccagtcgt aatggtgtgc gcccatgtcg ctgccataac
     4741 gcacgcggaa aagcagcgtt cgggccggtc cgttctcgta ttcgtgcact tcgccgggag
     4801 gatggaccac gaaagcaccc ggcgtgacgg caacagtttc ctttggcgtc ctcatgatgc
     4861 cgccacccga aaagcaaaaa tagatctcgg tagcgtgagg gtggcaatga tacgggctga
     4921 tctggcccgg ctcccagcag gcgacggtga cgtccccatc ggcgatcctg ccgagaattt
     4981 tttcgacgtg gtgcttggga tcccattgct gctcgcgctc gagactaaaa acgtgcatgg
     5041 cgatgatgct ccggcgaaac tagattacag cctaacgcaa cctcgattcg ggcaggagag
     5101 ggcggcgttg cgcaccacgt gcgcgcattg atagaagggg cgtactgggc ccgtagctca
     5161 atggttagag ccgaccgctc ataacggtct ggttggaggt tcgagtcctc ccgggcccac
     5221 cacgcagttc cctcaatctc tgattacaga gactttgcga gaaaagcccg cattagcgcg
     5281 gccctttcga cgcgtgatcg tcgctatccg gtctccggct ggtgggatgc gcagaattca
     5341 gggcccggtc tctggccgaa aaaattctgt tcctggcgcc gggttgccta ttgaggaaag
     5401 tgcctacgac gcgagcccga gcctggcgta ttgcagtgac cattc
//
LOCUS       DATDHO010000567         2612 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_275796, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000567 DATDHO010000000
VERSION     DATDHO010000567.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2612)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2612)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2612
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_275796"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1146)
                     /gene="dapE"
                     /locus_tag="VIY07_10885"
     CDS             complement(<1..1146)
                     /gene="dapE"
                     /locus_tag="VIY07_10885"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEY6382293.1"
                     /translation="MALAVDPIVIARELLRCRSVTPVEGGALAFLEGLLKQAGFAVHR
                     VTFRETGTDDVENLYARIGTAPPNLVFAGHTDVVPPGDEKAWKHPPFSGEVAGGEMYG
                     RGAVDMKGGIACAIAAVLEYLAANGGNPKGSISFLITGDEEGIAVNGTPKLLKWAAER
                     GEKFDHCILGEPSNQQTLGDTIKIGRRGSLNGHLIVTGRQGHVAYPQRAENPIRGLVS
                     LIAALQSEPLDKGSSQFAPSHLEFTTVDVGNKTVNLIPGEARARFNIRFNDNHTLDSL
                     KQLIEQRATKASAGKIKFSLQWEPSNAGVFLTTPGPFTELVAKAVAEVTGRNPELSTT
                     GGTSDARFITQYCPIVEFGLVGQTMHQVDERVPIADLHALTTIYRKII"
     gene            complement(1149..1979)
                     /gene="dapD"
                     /locus_tag="VIY07_10890"
     CDS             complement(1149..1979)
                     /gene="dapD"
                     /locus_tag="VIY07_10890"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEY6382294.1"
                     /translation="MSTDKLASIIEEAFEGRDKIGPKTRGAVRKAVNSALDLLDAGKA
                     RVAERQADGQWHVNQWLKKAVLLSFRLNDMGVVSGGPGKAMWWDKVDSKLKGWNAARF
                     RKAGFRAVPGCVVRRSAFVAPGVVLMPSFVNLGAYVDSGTMIDTWATVGSCAQIGKNC
                     HISGGAGIGGVLEPLQAGPVIIEDNCFIGARSEVAEGVIVRTGAVLSMGVYLGASTRI
                     VDRDTGAILQGEVPPYSVVVPGMLPGKNGGPGLYCAVIVKRVDERTRSKTSINELLRD
                     "
     gene            2077..>2612
                     /locus_tag="VIY07_10895"
     CDS             2077..>2612
                     /locus_tag="VIY07_10895"
                     /inference="COORDINATES: protein motif:HMM:NF016819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HEY6382295.1"
                     /translation="MNRQSAGLGLLLLALSATNAAAHHVMGGRMPATLMDGLLSGLGH
                     PIIGIDHFAAVVAVGCLAAMHNAGPTLVIGFIEATMAGVVLHLHGASLPAAELLGAIT
                     VIALGALLVGNRQMPTGPVLTLFALVGLVHGYALGESIYGAEPTPIYAYLTGLAVVQS
                     AIALVAMKIARGFAGAPV"
BASE COUNT          474 a          787 c          804 g          547 t
ORIGIN      
        1 gatgattttt cgatagatcg tcgtcagcgc atgcaggtcc gctataggca cccgttcgtc
       61 gacctgatgc atggtctggc cgacaaggcc aaattcgaca atgggacaat actgagtgat
      121 gaaccgggcg tccgaggtgc caccggttgt cgatagctca gggttgcggc cggtaacttc
      181 ggcgacagct tttgccacca gttcagtgaa cggccccggg gtcgtcaaga acacccctgc
      241 gttcgaaggc tcccactgca gcgaaaactt tatttttccg gcggatgcct ttgtcgcacg
      301 ctgttcgatc agctgcttca gggaatccaa tgtgtggttg tcgttaaaac ggatattgaa
      361 acgcgctcgc gcctcgccgg gaatcaagtt cacggtcttg ttgccgacat cgacagtcgt
      421 gaattcgaga tgcgacggcg caaattgcga gctgcccttg tcgagcggct cgctctggag
      481 cgccgcaatc agcgagacca gtccgcggat cggattttcc gctcgttgcg ggtaggcgac
      541 atggccctgc cttccggtaa cgatgaggtg gccgttgagc gagcctcgtc ggccaatctt
      601 gatcgtatcg cccaatgttt gctgattgct cggttcgccg agaatgcaat gatcgaattt
      661 ttcgccccgc tcagccgccc atttcagcag tttcggcgtg ccgttgacgg cgatgccttc
      721 ctcgtcaccg gtaatcagga atgaaatcga gcctttgggg tttccaccat ttgccgccag
      781 atactcgaga acagccgcta tggcgcaggc gatgccccct ttcatgtcga ccgcgccgcg
      841 cccgtacatt tcgccgccgg caacttcgcc ggaaaatggc ggatgcttcc aggctttttc
      901 gtcccccggc gggaccacgt cggtgtgacc tgcgaacacc agattgggcg gggcggtacc
      961 gatgcgggcg tagaggtttt cgacgtcgtc ggtgccggtt tcgcgaaacg ttacgcgatg
     1021 aacggcgaag ccagcctgct tgagcaggcc ttcaaggaac gccaacgcgc cgccttcgac
     1081 cggcgtgact gaccggcagc gcaataactc gcgggcaatg acgatgggat cgacggcaag
     1141 tgccattctc aatcccgcaa cagctcattg atgctggttt tggagcgcgt gcgctcgtcc
     1201 acgcgcttga cgatgacggc acaatacaat ccaggcccgc cgttcttgcc tggcagcatc
     1261 ccaggcacga caacggaata gggcgggacc tcgccttgca aaatcgcgcc tgtgtcgcgg
     1321 tcaacgatgc gtgtcgatgc gccgagatag acgcccatcg acagcaccgc gccggttcgc
     1381 acgatcacgc cttccgccac ctcggagcgc gcaccgatga agcaattgtc ctcgatgatc
     1441 accggacccg cctgcaacgg ctcgagtacg ccgccgatgc cggccccgcc ggaaatgtgg
     1501 cagttctttc cgatctgcgc gcagctgccg accgttgccc aggtatcgat catggtgcct
     1561 gaatcgacgt aggcaccgag atttacaaaa gacggcatca gtacgacgcc gggagcgacg
     1621 aatgcggagc gccggacgac gcagccgggc acggcacgga agccggcttt gcggaatcgc
     1681 gccgcgttcc aacccttcag cttggaatcg accttgtccc accacattgc tttgccggga
     1741 ccgccggaaa ccacgcccat gtcattgagg cggaacgaca gcagcacggc cttcttgagc
     1801 cactgattga catgccattg accgtccgcc tggcgctcgg cgacgcgcgc tttgccggca
     1861 tccaataagt cgagcgcgga gttcaccgcc ttgcgtacgg cgcccctggt ctttgggccg
     1921 atcttgtcgc ggccttcgaa tgcttcctcg atgatgcttg cgagtttgtc ggtggacatg
     1981 ccggctccag ttcttcgctg cggtttgtcg ggggcggggc aggggatgtc aagttttgct
     2041 cagtgaagct aagcttgtga ccagggagaa atgcacatga atcggcaatc cgcagggctc
     2101 ggtctgctcc tgctggcgct cagcgcaacc aatgcggccg cgcatcacgt catgggcgga
     2161 cgcatgccgg caactttgat ggacggctta ttgtcgggac tggggcatcc gatcatcggg
     2221 attgaccact ttgcggcggt tgtggcggtt ggctgccttg ccgccatgca caacgctggg
     2281 ccgacgcttg tgattggctt tatcgaagcc acgatggctg gagtggtctt gcatctgcac
     2341 ggagccagcc tgccggccgc ggagcttctg ggggcgatca ccgtaatagc gctcggcgcg
     2401 ctgctggtgg gcaatcggca gatgccgaca ggtcccgtgc ttacgctttt tgccctcgta
     2461 ggactcgtgc acggttacgc actcggggag tcgatatacg gtgccgaacc aacgccgatt
     2521 tacgcctacc tgaccgggct tgcggttgtt caaagcgcta tcgcgcttgt ggcgatgaaa
     2581 attgcgcgtg gtttcgccgg tgcgccggtg ag
//
LOCUS       DATDHO010000568         1991 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_27241, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000568 DATDHO010000000
VERSION     DATDHO010000568.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1991
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_27241"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..>1991
                     /locus_tag="VIY07_10900"
     CDS             169..>1991
                     /locus_tag="VIY07_10900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEY6382296.1"
                     /translation="MPKPEQDYSETLFLPQTDFPMRAGLPQREPEILARWQRDDLYTQ
                     LRATSKGREKFILHDGPPYANGNIHIGHALNKILKDVVTRSQQMLGFDSNYVPGWDCH
                     GLPIEWKIEEENYRSRNKPKPNLSDPGAMVAFRQECRAYAEHWLNVQREEFMRLGVVG
                     DWAHPYTTMDFFAEAQIARELMKFAANGTLYRGSKPVMWSVVEKTALAEAEVEYEDYT
                     SDQVWVKFPVADIALEGDSKDDVAVAFELVGNASVVIWTTTPWTLPGNRAVSYSPRIS
                     YGLYRIVEAPADNWAKSGDLLILADKLAEAVFRQARVTAFEKVKAVGTNVLAGMICDH
                     PLKAMGYDFAVPLLAGEHVTDEDGTGFVHTAPGHGRDDFEIWTANRSALEARGINPAI
                     PYTVDENGAFTEAAPGLTGRRVINDKGEKGDANEAVIKALVEAGMLIARGRLKHQYPH
                     SWRSKKPIIFRNTPQWFIAMDKDIATKGDTLRHRALSAIKVTRWVPPQGENRITGMIE
                     SRPDWVISRQRAWGVPIALFVKEKPDGSVEILQDPDVEVRIVEAFEREGADAWYKPGA
                     RERFLGRLANDSWKKIDDILDVWFDSGCTHAFVLEDPQHFPT"
BASE COUNT          416 a          571 c          633 g          371 t
ORIGIN      
        1 atctatagag acgctcaagg gccacatggc cgcggatgtg gcccaggccc gtgactcact
       61 caagcgcgcc ggcgatgcgt tccctgtcct gggagaggtg tagcgatagc tcgctcggga
      121 cgatatcccg gcctttccgc attcggatcg gcctgctagt aagcgcatat gcccaagccc
      181 gaacaagatt attcggaaac gctgtttctg ccgcagactg actttcccat gcgcgccggc
      241 ttgccgcaac gcgagccgga gatcttggcg cgctggcaaa gagatgatct ttacacgcag
      301 ctccgcgcga cgtcgaaagg acgcgagaag ttcattctcc acgacgggcc gccttacgcg
      361 aacggtaaca tccatatcgg ccatgcgctg aacaagattc tcaaggacgt ggtcacgcgt
      421 agccagcaga tgttggggtt cgattccaac tacgtgccgg gctgggactg tcatggcctt
      481 ccgatcgaat ggaagatcga ggaagagaac taccgctcca ggaacaagcc gaaaccgaac
      541 ctgtccgatc ccggcgccat ggtcgcattc cggcaggaat gccgcgcata cgccgagcac
      601 tggctcaacg tgcagcgaga ggagttcatg cggctggggg tcgtgggcga ttgggcgcat
      661 ccctacacga cgatggattt tttcgccgag gcgcagatcg cccgcgaact gatgaagttt
      721 gccgccaacg gcaccctgta tcgtggctcg aagcccgtga tgtggagcgt ggtggagaag
      781 accgcgctgg cggaagccga ggtggaatac gaggattaca ccagcgatca ggtatgggtg
      841 aagtttccgg tcgcggatat tgcgctcgaa ggggacagta aggacgacgt tgccgtggct
      901 ttcgagcttg ttggcaatgc atccgtcgtg atctggacca ccacgccttg gacgctgccc
      961 ggcaatcgcg ccgtcagcta ttcgccgagg atatcgtacg ggctctacag gattgtcgag
     1021 gcgccggctg acaactgggc aaaaagcggc gatcttctca tcctcgccga caagcttgcc
     1081 gaagctgttt tcaggcaggc ccgcgtcaca gcttttgaaa aggtgaaagc cgtcgggacg
     1141 aacgtgctcg ccggcatgat ctgcgatcat ccattgaagg ccatgggtta cgattttgcc
     1201 gtccctttgc tcgccggtga gcacgtgacc gacgaagacg gcaccggctt tgtgcatacg
     1261 gcgcctggac atggccgcga cgactttgaa atatggactg ctaaccgttc agcgcttgaa
     1321 gcgcggggga tcaatccggc aattccttac accgttgacg agaacggcgc gttcacggaa
     1381 gccgcgcccg ggttgaccgg caggagggtg atcaacgaca agggcgagaa gggcgacgcg
     1441 aacgaagcgg tgatcaaggc attggtcgaa gccggcatgt tgatcgcgcg cgggcgcctc
     1501 aagcaccaat atccgcatag ctggcgttcc aagaaaccga tcattttccg taatacgcca
     1561 cagtggttca tcgcgatgga caaggacatc gcgacgaagg gggacacgtt gcgccatcgc
     1621 gcgctctcgg caatcaaggt cacgcgctgg gtcccgccgc agggcgagaa tcgcatcacc
     1681 ggcatgatcg aatcgcgtcc cgactgggtg atttcacgcc agcgcgcctg gggggtgccg
     1741 atcgctctgt tcgtcaagga aaagccggac ggctcggtcg agatcctcca ggatccggac
     1801 gttgaagtgc gcatcgtcga ggcgttcgag cgggaaggcg cggatgcctg gtacaagccc
     1861 ggcgcccgcg agcgtttcct gggcaggctc gcgaacgatt catggaaaaa gatcgacgat
     1921 attctcgacg tctggttcga ctcgggctgt acacacgcgt ttgtgctgga ggacccgcag
     1981 cacttcccga c
//
LOCUS       DATDHO010000569         1887 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_127086, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000569 DATDHO010000000
VERSION     DATDHO010000569.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127086"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..419
                     /gene="dapB"
                     /locus_tag="VIY07_10905"
     CDS             <1..419
                     /gene="dapB"
                     /locus_tag="VIY07_10905"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEY6382297.1"
                     /translation="LAALTKRVARTLDQSFDVEILEMHHNQKVDAPSGTALLLGRAAA
                     DGRGIELDKQSVKSREGHTGARKSGDIGFAALRGGSVVGEHSVIFAGPAERLELAHKA
                     EDRMIFARGALHAVRWARDQKAGLYSMMDVLGLKDF"
     gene            428..1051
                     /locus_tag="VIY07_10910"
     CDS             428..1051
                     /locus_tag="VIY07_10910"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004619 - phosphoglycerate mutase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEY6382298.1"
                     /translation="MTDRLLVLVRHGQSEWNLKNLFTGWRDIDLTEKGVAEACEAGRK
                     LKVQGIKFDVAFTSSLKRAQRTLDLMLAELGQTSIPVFKDEALNERDYGDLVGLNKDD
                     ARKKWGEEQVHIWRRSYDVAPPSGESLKDTLARTLPYYVTEILPRVLRGERVLVSAHG
                     NSLRALVMVLDRHTPETIIKLNLETGVPMIYRLNADSTVASKLDLAA"
     gene            complement(1053..>1887)
                     /locus_tag="VIY07_10915"
     CDS             complement(1053..>1887)
                     /locus_tag="VIY07_10915"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEY6382299.1"
                     /translation="ADYDVVRRAIAHIRGNWRAQPEIDVIANAAGVSATDLHHLFRRW
                     CGLTPKAFLQALTLNRARELLRSSASILDTAYEVGLSGPSRLHDLFVTHEAMSPGEWK
                     AGGEGLTITYGFHPCPFGMALVMTTPRGLAGLALADPGKERGALKDMKARWPKARYVE
                     DFAATAATARRIFDPALWRKNQPLRVVLIGTDFEVRVWEKLLNIPIGGLTTYSDLAAK
                     AGSPKGARAVGAAVGKNPICFVVPCHRVIGKDGDITGYHWGITRKRAMLGWEAGMVAA
                     A"
BASE COUNT          379 a          554 c          593 g          361 t
ORIGIN      
        1 tacttgccgc gctgaccaag cgcgtggcgc gaacactcga ccaatccttc gacgtcgaaa
       61 tcctcgagat gcatcacaat cagaaagtcg atgcgccgtc cggcactgcg ctgctgctcg
      121 ggcgtgcagc ggcggacggc cgcggcatcg agctcgacaa gcaatctgta aaaagccgcg
      181 aaggccatac gggcgcgcgc aagtcgggag atatcggttt tgcggccctg cgcggcggca
      241 gcgtggtggg cgagcacagc gtgatttttg ccggccccgc cgagcgtctt gagctggcgc
      301 acaaggccga ggatcgcatg atctttgcgc gcggggcctt gcacgcggtg cgctgggcgc
      361 gtgatcagaa ggccgggctt tattcgatga tggacgttct gggactgaag gatttctgag
      421 ggaagaaatg accgatcggc ttctcgtact cgtgcgtcat ggccagagcg agtggaacct
      481 gaaaaatctg ttcaccggat ggcgcgatat tgatctgacc gaaaaaggtg tcgccgaagc
      541 atgcgaagcg ggccgcaaat tgaaggtgca aggaatcaag ttcgacgtcg ctttcacatc
      601 gtcgcttaag agggcgcagc ggacgctcga tctgatgctg gcagaactgg gccagacttc
      661 gattcccgta ttcaaggatg aggcactcaa tgagcgcgac tatggcgatc tcgtggggct
      721 gaacaaggac gacgcgcgaa aaaaatgggg cgaggagcag gtgcacattt ggcgccgatc
      781 ctacgacgtg gcgccgccca gcggcgaaag cctcaaggat acgctcgcgc gcaccttgcc
      841 ctattacgtt acggaaatcc ttccacgcgt gctgcgcggc gaacgcgtgc ttgtgtcggc
      901 ccacggcaat tcattgcgcg cgttggtgat ggtgctcgac aggcacacgc ctgaaaccat
      961 catcaagctc aatctggaaa cgggcgttcc gatgatctac cggctcaacg ccgactctac
     1021 ggtggcctcg aagctggatt tggcggcctg agctaggcgg ctgcgaccat tcccgcttcc
     1081 cagccgagca tggcccgttt tcgggtgatc ccccaatgat agccggtgat gtcgccgtcc
     1141 ttgccgatga cgcggtggca cggcaccacg aagcagatcg gattttttcc gaccgctgcg
     1201 ccgaccgcgc gcgcgccctt cggcgacccg gctttcgcgg ccaggtctga ataggtggtt
     1261 agcccaccta ttggaatatt cagcagcttt tcccaaacgc ggacttcgaa gtcggtgcca
     1321 atcaggacaa cgcgcagagg ctggttctta cgccacaggg cgggatcgaa gatgcgccgc
     1381 gcggtggcag ccgtggccgc gaaatcctcg acatagcgtg cctttggcca gcgtgccttc
     1441 atatccttaa gcgctcccct ttccttgccg ggatctgcga gcgccaggcc ggccagtccg
     1501 cgtggcgttg tcatcaccag ggccatgccg aacggacaag gatgaaaccc ataggtgatc
     1561 gtcaggcctt cgccgcctgc cttccattct ccaggcgaca tggcctcgtg agtaacgaac
     1621 agatcgtgca gtcggctcgg acccgacagg ccgacttcgt aggcggtgtc aagaatgctt
     1681 gcagacgatc gtagcagttc gcgcgcgcgg ttcagcgtca aggcttgcag aaatgcttta
     1741 ggcgtgaggc cgcaccatcg acgaaacagg tgatgcagat cggtcgccga tacaccggct
     1801 gcgtttgcta tgacatcgat ctcaggctgg gcacgccagt ttccgcgaat atgcgcaatt
     1861 gcacggcgaa cgacgtcgta gtctgca
//
LOCUS       DATDHO010000570         2306 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_176353, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000570 DATDHO010000000
VERSION     DATDHO010000570.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2306)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2306)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2306
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176353"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1282
                     /locus_tag="VIY07_10920"
     CDS             <1..1282
                     /locus_tag="VIY07_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6382300.1"
                     /translation="GRIQINLKPIETRRISANDVIRRLQRALAKVEGITLFMQPVQDL
                     TVEDRVSRTQFQYSLEDPDPKELAVWVPRFVQKLQALPVLRDVASDQQDQGLQARLVI
                     DRSTASRLGIEPQALDDTLYDAFGQRQVSTIFTQLNQYRVVLETQPDFHQGPDNLKDL
                     YVRSAANGSVPLSTFTQLESSNVPLTVNHQGQFPVVTVSFNLAPGAALGDAVAAVNQA
                     KQEIGLPPSIDTSFQGTAQAFQASLRNESLLILAALVTVYIVLGVLYESYIHPITILS
                     TLPSAGVGALLALILSRTEFGVIALIGIILLIGIVKKNAIMMIDFALDGERNEGKQPL
                     DAIYQAALLRLRPILMTTMAALLAGVPLALGTGTGSELRRPLGIAIIGGLIFSQVLTL
                     YTTPVIYLAFDRLAKRLRRMRARRPLAAAQPAEP"
     gene            1282..>2306
                     /locus_tag="VIY07_10925"
     CDS             1282..>2306
                     /locus_tag="VIY07_10925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6382301.1"
                     /translation="MNISEPFIKRPIATTLLTVALGLAGAVAYRFLPVSPLPQVDFPT
                     IQVQASLPGASPETMASSVATPLERQFGRIAGITEMTSSSILGSTTIVIQFDLNRNID
                     AAGRDVQAAINAARSQLPANLPSNPFYRKVNPADAPILLLALTSDLVDRARIYDVASS
                     ILAQKLAQVKGVGQVTVGGGALPAVRVDINPTVLNKYGIDLEDVRATLASSNAYRPKG
                     EVANPQRSWSLSATDQLLKAAEYQPLIIHYQNGGALRLSDVATVTDSVENIFTGGLAN
                     GKPAVLIIVSRQPGANIIETVDGVLALLPDLRAEVPPAVKLSVIQDATATIRASVHDV
                     KLTLLIS"
BASE COUNT          446 a          746 c          641 g          473 t
ORIGIN      
        1 gggtcgcatc cagatcaact tgaagcccat cgaaacccgc aggatcagcg cgaatgacgt
       61 gattcgccgc ctgcagcggg cgcttgccaa ggtcgaaggc atcacgctct tcatgcaacc
      121 ggttcaggac ctgactgtgg aagaccgggt gagccggacg cagtttcagt acagtctcga
      181 ggatccggac ccgaaggaac ttgcagtctg ggtaccgcga ttcgtgcaaa aactccaagc
      241 cctgccggtg ctgcgtgatg tcgccagtga tcagcaggac caaggactcc aggcgcgcct
      301 ggtgattgac cgcagcaccg cctcgcggct cggtatcgag ccccaggcgc tcgatgacac
      361 gctctacgac gccttcggtc aacggcaagt ctcgacgatt tttacccagt tgaatcagta
      421 tcgggtcgtg cttgaaaccc aaccggattt ccaccaggga cccgataatc tcaaagatct
      481 ttacgtgcgc tccgctgcca acggctcggt gccgctcagt acctttaccc agctcgaatc
      541 gtccaacgtc ccgttgaccg tcaaccatca aggacagttc cccgtggtca ctgtgtcctt
      601 caatctcgcg cccggcgctg cactgggaga tgcggtggct gcggtcaacc aggcgaagca
      661 ggagatcggt ctcccgccga gtatcgacac cagtttccaa ggcacggccc aggcgtttca
      721 ggcgtcgctc cggaacgagt cgctacttat cctggctgcc ctcgtgacgg tgtacatcgt
      781 ccttggcgtg ctctacgaga gttatatcca cccgatcacc atcctttcga ctctgccgtc
      841 ggcgggagtc ggggccctgc tcgctttaat cctctctcgt accgaattcg gcgtcatcgc
      901 gctcatcggc attattttgc tgatcggcat cgtcaagaaa aacgccatca tgatgatcga
      961 cttcgccctg gatggcgaac gcaatgaagg aaagcaaccg ctcgacgcaa tctaccaggc
     1021 tgctttgctg cgattgcgtc cgatcttgat gacgacgatg gcggcgttgc tggcaggcgt
     1081 gccgctcgcc ctcggcaccg ggaccggctc ggaattgcgc cgtccactgg ggattgccat
     1141 catcggcggc ctgatcttca gccaagtctt gaccttgtac acaactccgg tcatttatct
     1201 cgccttcgat cgcctggcca aacggctgcg tcgcatgcgc gctcgccgtc cgttggcggc
     1261 ggcacagccg gcggaaccct aatgaatatc tcggagccgt tcatcaagcg gcccatcgcc
     1321 accactctgt tgaccgtggc gcttggcctc gcgggagctg tggcgtatcg ctttttaccg
     1381 gtatcgcctc tgccccaggt ggacttcccg actatccagg tccaggcatc gcttccaggc
     1441 gcgagtccgg agaccatggc ctcgtccgtc gcgacgccgc tggagcgcca attcggccgc
     1501 atcgccggca tcactgagat gacttccagc agtattctcg gctcgactac aatcgttatt
     1561 caattcgatc tcaaccgcaa catcgatgcg gccgggcgcg acgtgcaggc cgcgatcaac
     1621 gctgctcgga gtcaactgcc ggcaaatctt ccttccaatc cgttctaccg taaggtcaat
     1681 ccggccgacg cgcccattct acttctagcg ctgacctccg atctggtcga tagagcgcga
     1741 atatacgacg tggcatcctc catcttggcc cagaagctcg cgcaggttaa aggcgtcggg
     1801 caggtcacgg tcggaggcgg cgcgctgccc gcggtccgcg tcgatatcaa tccgacggtg
     1861 ttaaacaagt acggaatcga cctggaagac gtccgcgcaa cccttgcgag ctccaatgcc
     1921 tatcggccga agggcgaggt cgcgaaccca caacgctctt ggtccttgag cgcgaccgat
     1981 caactgctca aagccgccga gtatcaaccg ctgatcatcc actaccaaaa cggcggcgcg
     2041 ctgcgcctgt cagatgtagc gaccgtgacc gactcggttg aaaacatttt caccggaggc
     2101 ctggcgaatg ggaagcctgc agttctcatc atcgtttccc gccagccagg ggccaacatc
     2161 atcgagacgg tcgatggtgt cctcgccctg ttgcccgacc ttcgggctga ggttccaccg
     2221 gctgtgaagc tctcggtgat acaggacgcc accgcgacga ttcgggcgtc ggtccatgat
     2281 gtcaaactca cgctactgat ttcaat
//
LOCUS       DATDHO010000571         2702 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_424125, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000571 DATDHO010000000
VERSION     DATDHO010000571.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2702)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2702)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2702
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424125"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1065)
                     /locus_tag="VIY07_10930"
     CDS             complement(<1..1065)
                     /locus_tag="VIY07_10930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382302.1"
                     /translation="MTAGILLSSQTRGDSIELSAAGSWTAEYAGAIEPQVDAATRDIT
                     ARSIAINIARVDYLDTYGAWLIERAIRSWKNQGREARLVGLREDYRGLFEKVHSGTQT
                     LSPPLPRPNSIIATLESVGRTMASVGSDLVQLAQMLGSLLVAIKRVALRPTTFRFTSM
                     VHHLERVGWRAVPIVLLITVLIGAILAQQGIFHFRKFGADIYVIDMVGVLVLREVGVL
                     IVCIMVAGRSGSSYTAELGAMRMREEIDALRTMGFDPVEVLILPRILALVIAVPVLTF
                     LGSMAALYGGGLVSWLYGGIQPEVFLARLREAVTSTTFEVGMIKAPFMALVIGLVACV
                     EGLQVQGSAESLGEKTTNSVV"
     gene            complement(1376..2452)
                     /locus_tag="VIY07_10935"
     CDS             complement(1376..2452)
                     /locus_tag="VIY07_10935"
                     /inference="COORDINATES: protein motif:HMM:NF014653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HEY6382303.1"
                     /translation="MNLQSAKTARIPTTAVTGLIVDALGKVGVPVDDASKIAALMLEA
                     DLVGADAHGVFRLPQYSHRLRLGSTNPRPKITVNRTAPATALVDGDNGMGHLVVARAA
                     ETAIELARETGVARVGCRMSGHAGAAGVYAALPLQADMVGVYSAVANANHMPLAGGAE
                     PVLGTNPLAIAIPAGKEPPVVLDIATSIVSYGTIKNHRLQNTPLHGDWMIDLKTGDAV
                     TDPHKSAEALLLPMAGYKGAGLALTFGLLAGTLNGALFGRDCVDFNAEPDKVTNTGQF
                     VVALDPARFQPIGQFKAEVDRHIRELRNSKALPGQSVRLPGDHRAHRRADRQRNGIPL
                     APELLAQLDKLAADLSIKPLRERN"
     gene            complement(2449..>2702)
                     /locus_tag="VIY07_10940"
     CDS             complement(2449..>2702)
                     /locus_tag="VIY07_10940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382304.1"
                     /translation="KNIPKQPANIARRFYYDTILHSAPVLEFMIGHVGADRVLLGSDY
                     PYDMGMMDCVKHIRSLKISDVDKATIMGQRAATLLSGKS"
BASE COUNT          532 a          842 c          815 g          513 t
ORIGIN      
        1 gaccaccgag ttggtggttt tttcgccgag cgattcggcg ctgccctgca cctgcaagcc
       61 ttcaacgcag gcgacgagcc cgatcaccag cgccatgaaa ggcgccttga tcattcccac
      121 ctcgaacgtc gtgctcgtca ctgcctcgcg cagccgcgcc agaaacactt cgggttgaat
      181 gccgccatag agccatgaga ccagtccgcc gccatagagc gctgccatgg acccaaggaa
      241 agtgagaacc ggcactgcaa tgaccagggc gagaatgcgc ggcagaatca ggacttccac
      301 gggatcgaaa cccattgtgc gcaatgcatc gatttcctcg cgcatgcgca tggctcccaa
      361 ctccgcggta taggagctgc cggaacggcc cgccaccatg atgcacacga tcaacacgcc
      421 gacttcgcgc agcaccagca cgccgaccat gtcgatgacg tagatgtcgg cgccaaattt
      481 gcggaaatgg aagataccct gctgcgcaag aatggcgccg atcagcacgg taatgagcag
      541 gacgatcgga actgcgcgcc agccgacgcg ctccaggtga tggaccatcg acgtgaaacg
      601 aaaggttgtc ggccgcaacg caacgcgctt gatagcgacg agcagcgagc cgagcatttg
      661 cgccagctga acaagatcgg aaccgaccga cgccatcgtc cggccgacgc tttccagcgt
      721 cgcaatgatg ctgttcggcc gtggcagagg cggtgaaagc gtctgcgttc ccgagtgaac
      781 tttctcgaac aggccccggt aatcttcgcg caatccgacc aggcgcgctt cgcggccctg
      841 gttcttccag ctccgtatgg cacgctcgat gagccaggcg ccgtacgtat cgaggtagtc
      901 gacgcgcgcg atgttgatgg cgatgctgcg cgcagtgatg tcgcgcgtgg ccgcatcgac
      961 ctgcggctcg atcgcgccgg catactctgc cgtccaggac ccggcggcac tgagctcgat
     1021 cgaatcaccc cgcgtctggc tgctgagcaa aatgcctgcc gtcactcggc cactccatca
     1081 tcgaacagta tttcgcgccc gagcttgctt cgccgcgggc ggacgagctg agacaggact
     1141 ggatgcgttg cagcgggact tacgggttgc gccagaagcc caccgggccg actccaaggc
     1201 cgcaccgagc gcaatctgtc gccccgcccc ctcatgggta aaggttaaca aattggaggt
     1261 aatcgttaaa tctcgtttac ctttttaggt taataactat taaccatggt tccgcccggt
     1321 tccacgcggt ttcaggccac ttctttaagg cggttatgtg atgcggcagc gcggcctagt
     1381 tccgctcacg caggggcttg atcgacaggt ctgctgccaa tttatcgagc tgcgccagca
     1441 gttcgggcgc gagcggaatt ccattgcgct ggcggtcggc ccgccgatgc gcgcggtgat
     1501 cgcccggaag ccggacgctt tgcccaggca aggcctttga attgcgtagt tcgcggatat
     1561 gccggtcgac ttccgccttg aattgcccga ttggctggaa gcgggcggga tcgagggcca
     1621 cgacaaactg acccgtattg gtcaccttgt caggctcggc attgaaatcg acacagtcgc
     1681 gaccaaacag cgcaccgttg agcgtgcctg caagcagccc gaacgtcagg gcaagcccgg
     1741 cccccttgta accggccatc ggaagcagca gcgcctcagc gctcttgtgc ggatcggtga
     1801 ccgcatcgcc cgttttcaga tcgatcatcc aatcgccatg caggggcgtg ttttgcagcc
     1861 tgtggttctt gatcgtgccg taggagacga tcgaggtggc aatatccaga accaccggcg
     1921 gctccttgcc ggcgggaatt gcgatcgcga gcgggttggt cccaagcacc ggttcggcac
     1981 cgccggcaag cggcatgtgg ttggcgttcg ccaccgcaga gtagactccg accatatcgg
     2041 cttggagcgg cagcgcggca taaacgccag cggccccggc atgacccgac atgcggcagc
     2101 cgaccctcgc gacgccggtc tcgcgcgcga gttctatggc ggtctcagca gcacgcgcga
     2161 cgaccagatg acccatgcca ttgtcgccgt ccacgagcgc tgtcgccggc gccgtgcggt
     2221 tgacggtaat ttttggacgg ggattggtcg atccaagcct cagcctgtgc gaatactgcg
     2281 gcaggcggaa cacgccatgc gcgtcggcgc cgaccagatc cgcctcgagc atgagcgctg
     2341 caatcttgct ggcatcatca accggcacgc cgaccttgcc cagtgcatcc acgatcagtc
     2401 ctgtaacggc tgttgtcgga atacgcgcgg ttttggcgga ctgaaggttc atgatttgcc
     2461 cgaaagcaag gttgcagcgc gttggcccat aattgttgcc ttgtccacat ccgaaatttt
     2521 caacgagcgg atgtgcttta cgcagtccat cattcccatg tcatacggat agtcgctgcc
     2581 cagcaacacg cgatcggcgc cgacgtgacc gatcatgaat tccagcacgg gcgccgagtg
     2641 tagaattgtg tcgtagtaga agcgccgcgc gatattcgcc ggttgtttgg gaatgttctt
     2701 tt
//
LOCUS       DATDHO010000572         7403 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_73478, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000572 DATDHO010000000
VERSION     DATDHO010000572.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7403)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7403)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7403
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73478"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..283)
                     /locus_tag="VIY07_10945"
     CDS             complement(<1..283)
                     /locus_tag="VIY07_10945"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEY6382305.1"
                     /translation="MGSLPKLDKATGTAGKPARTVLPSLLSAGRPLVMGILNVTPDSF
                     SDGGQFLEPTAANARAAQMMKQGADILDVGAESTRPYGGAVPVSAEEEKA"
     gene            complement(335..742)
                     /locus_tag="VIY07_10950"
     CDS             complement(335..742)
                     /locus_tag="VIY07_10950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4332 domain-containing protein"
                     /protein_id="HEY6382306.1"
                     /translation="MSYPITDIDGINGEVAVVLKSVGIRSTDRLLEAARTVKGRKELA
                     AKTGFGEKQLLYWANVADRMRIKGVRKEYSELLQAAGVDTVKELKYRNPGNLAKAMAD
                     ANKKRKLVRVLPSEKVVKRWIENARLLPLKITY"
     gene            complement(788..1147)
                     /locus_tag="VIY07_10955"
     CDS             complement(788..1147)
                     /locus_tag="VIY07_10955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006165185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2267 domain-containing protein"
                     /protein_id="HEY6382307.1"
                     /translation="MDELIGRLVANVGIDRNAAEKAVAIILDFLRKEGPAEKVEALIE
                     RLPGADALLATESESGGMFPMGGIMGAGTKMMAVGLSMGQVQGVTRETIAYAREKIGD
                     DAVGEIVGAIPGLSQFV"
     gene            2135..3517
                     /locus_tag="VIY07_10960"
     CDS             2135..3517
                     /locus_tag="VIY07_10960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEY6382308.1"
                     /translation="MKALEAVLDRIDQDIDQSVARLFALLRIASISTDPAYKDQCRAA
                     AEHVAADLKSIGFEASVRPTAGHPVVVGKSNSATGPRVLFYGHYDVQPVDPLNLWKTP
                     PFEPRIETLPDGRKIIVARGACDDKGQAMTFIEACRAFKVVTGKLPLPITMLIEGEEE
                     CGSKNLFGFVRDNAAEFKLDLALVCDTAMWDQKTPAVTTSLRGLIYEDVKIICADRDL
                     HSGVFGGAAQNPLRLLAEILGAMWDDKGRVTIPGFYDGVKDLPSDIKADLKALDLTAE
                     KFLGPIGLKNPAGEKDRLVIEQVTTRPTAEINGIIGGYTGEGAKTVIPGEASAKVSFR
                     LVGEQNPEKIRDAFRDFIRARLPGDCKVEFGNFALAPAIQLSFDNPALTKARGVLAEE
                     WGHKAVAVGAGGSIPIVADFKNVLGMDSLLVGFALDDDRVHSPNEKFDLKCFHKGIRS
                     WARILHALAS"
     gene            complement(3552..4313)
                     /locus_tag="VIY07_10965"
     CDS             complement(3552..4313)
                     /locus_tag="VIY07_10965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382309.1"
                     /translation="MNLRAVKAIYGFEMARTGRTIWQSIVSPVLSTSLYFVVFGAAIG
                     SRITEIEGVPYGSFIVPGLIMLTLLTQSTMNASFGIYFPRFTGTIYEILSAPVSPFEV
                     VLGYVGAAATKSIILGLIILATSWLFVPLHIAHPFWMVTFLVLTAATFSLLGFIIGIW
                     ADGFEQLQIVPLLIITPLTFLGGTFYSTSVLPPVWQTISLFNPVVYLVSGFRWSFFEI
                     ADVSHAVSIGMTLLFFAACLVTVWWMFRTGYKLKK"
     gene            complement(4310..5236)
                     /locus_tag="VIY07_10970"
     CDS             complement(4310..5236)
                     /locus_tag="VIY07_10970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382310.1"
                     /translation="MQSIISIRNLSKSYASGFRALKEVNLDIRRGEIFALLGPNGAGK
                     TTLIGIICGILVPTEGKVTVGGHDIITDYRAARSLIGLVPQELHTDAFESVWTTVSFS
                     RGLFNKPKNPAHIEKVLRALSLWDKKDNQIMTLSGGMKRRVLIAKALSHEPQILFLDE
                     PTAGVDVELRKDMWQVVRDLRNSGVTIILTTHYIEEAEDMADRIGVINKGEIILVEEK
                     VELMRKLGKKQLTLELQQRLSAIPPELSSFKLSIAEDGSTLIYDYDTQAERTGVATLL
                     GELSRAGLRIRDLQTNQSSLEDIFVGLVSDRQ"
     gene            complement(5321..5977)
                     /locus_tag="VIY07_10975"
     CDS             complement(5321..5977)
                     /locus_tag="VIY07_10975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HEY6382311.1"
                     /translation="MSVFIFDAYGTLFDVHAAIARHRDQVGSDADRISAVWRTKQLEY
                     TWTLTLAGHYRDFWWVTERALDYSLALIPGVDKSVRSKLLDAYFTLDAFPDARSTLRA
                     LKSKGRETGILSNGSPAMLKGAVEAAGIGSDLDAVLSVDTLKMFKPQPEVYRLVTGHF
                     KCKPGDVTFVSSNRWDVMAGVSVGFRALWVNRANMPDEYLDFPASQTLRDLGGLAEYA
                     "
     gene            6139..6999
                     /locus_tag="VIY07_10980"
     CDS             6139..6999
                     /locus_tag="VIY07_10980"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEY6382312.1"
                     /translation="MPGQPWSKTWTFYEGDWHEGNIPIMGVRDHAAWLCSSVFDGART
                     FEGVSPDLDLHCARVNASAETMHLKPLVSEETWMGLAWDGSKRFEKDAALYIRPMYWA
                     ERSGTLLVAPDPESTKWCLSLYEAPMRKPEGFSITLSPYRKPSLECMPVNAKAGCLYP
                     NNARALLEANARGYGNCVVLDLLGNVAELATANIFIAKDGVVFTPAPNGTFLNGITRQ
                     RVIKLLREAGVTVIEIALSYRDVQNADEIFSSGNYSKVMPVIRIDERSLQPGPLYRKA
                     REVYWDYAHA"
     gene            6992..>7403
                     /locus_tag="VIY07_10985"
     CDS             6992..>7403
                     /locus_tag="VIY07_10985"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HEY6382313.1"
                     /translation="MRERNTRAPIGIVGLGLMGEVYAQRLIDAKFSVIGFDIDPARRN
                     RLREIGGSPVSSVAELAHPSHCIIVAVFNTEQVEDVIENKILPALGDGSGKIVLCMST
                     CDPDRVTALARRVIPRGIRYLDVPVSGTSDQVRRG"
BASE COUNT         1554 a         2130 c         2124 g         1595 t
ORIGIN      
        1 gggccttttc ctcttccgcc gataccggaa cagcgccgcc atacggccgc gtcgactctg
       61 cccccacgtc aaggatatcg gcgccctgtt tcatcatttg ggcagcacgc gcgtttgccg
      121 cagtcggttc cagaaactgg ccgccgtccg aaaacgaatc cggggtcaca ttgagtatgc
      181 ccatgacgag cgggcggccg gccgagagca atgacggcag taccgttcgt gcgggtttgc
      241 cagcggtccc ggtggcttta tcgagcttag gcaggcttcc catgccggtc gctttgcgcg
      301 gtcggcgcgg gactgtcaag gagcctcagg ggccctaata ggttatcttc agcggcaata
      361 gcctggcgtt ttcgatccag cgtttgacca ctttttcgga cggcagcacg cggaccaact
      421 tccgcttctt gttggcatcg gccatggcct tggccaggtt gcccggattt cgatacttca
      481 gctctttcac ggtatcgacc ccggcagcct gcagcagttc agaatattcc ttgcggacgc
      541 cctttatgcg catgcggtcg gcgacattgg cccagtagag tagttgtttc tctccaaagc
      601 cggttttcgc ggcgagctcc ttgcgtccct ttaccgttcg agcggcttct aaaagacggt
      661 cagtcgacct aattcccacc gacttgagaa caaccgcgac ttcgccgttg atcccgtcga
      721 tatcagtgat gggataggac attgtgcctc ctccgctttt tattatcttt ttcgtgtcgc
      781 aaacggttca aacaaactga ctcagccctg ggatagcacc cacgatttcc ccgacagcat
      841 cgtcgccaat cttttctcgc gcatacgcga tggtttctcg ggtcacccct tgcacctgcc
      901 ccatgctcag ccccactgcc atcattttgg taccagcacc catgatgcca cccatgggaa
      961 acatgccgcc actttcggac tctgtcgcca gcaaggcgtc cgccccagga agcctttcga
     1021 ttagcgcctc gaccttttct gccgggcctt ccttgcgaag gaagtcgagg ataatggcga
     1081 ccgctttttc tgcggcattt cgatcaatgc cgacgttggc gacgagacgg ccaatcagct
     1141 catccatgat cccctcgcgc tccgcacttg tggcggaatt gcgatcatat tgaacgccgt
     1201 ttttggcgat gacaagcgtg acgccggcta atttgtgacc ggagtcatga tctggcaact
     1261 gtcgcaacag caacagtcaa gtgaaaatga gtcattgcta acaaaatatc gtgcaggtgt
     1321 atccgcgatg cactattgcg cgcgcgagac tgttcatcac ttcaaaatga aacgagtgcc
     1381 gtcgacgatc gcgatttagg ctgactcgat gactgttcgt agttttacga tccggtgact
     1441 cgaaatttga taactccgat cagcccgtgt atcttgggaa taatccagag agaagaacga
     1501 tataccgacc ggcccggagg gggcccgcca attccgtgtg cgggcgtttc acgaataaac
     1561 cgggccaggt cgtgggggct tgaaaaaggg gggcgttgat gaagtcgcta agcgtttcgc
     1621 ggatcgttgt cgtcgccgac agcggtcaga gtgagttttt gactacgcgt cttcggcgga
     1681 tgaacatagc agaggttagg gcggttactg aactcgagga ggcgaggcgg ttgtgtcaat
     1741 ccggccatgc cgatgcttgc ctggtggcgg tcgatgcgcc agttcccgat tgcgtaccgc
     1801 cccctgaaag cgatgcgcca gggcgctctt gcggcgttcc ggcgttgatg gtcgctccag
     1861 ttgtcacgcc ccacttacgg cgcacggccc gtcgctgcgg gtatctggcc gccgtccccg
     1921 tcacgattcc tccgcgcctg ctttaccgcc gtctcggtgc cgcccttcag catcgccgcg
     1981 ccgcgcctgc cagttcgcgc ccattgacaa tgataattcc gccttccgga cggccaggta
     2041 cagccgttct ggcaaagcca acgctgcatt gaggctcctt ttcagccccg gtcgccattg
     2101 ctagcctcgg actccgctcg caaggagtcc cctcatgaaa gctctcgagg cggtgctcga
     2161 ccgcatcgac caggatattg atcaaagcgt ggctcgattg ttcgcgctgc tgcggatcgc
     2221 ttcgatttcc actgatccgg cctacaagga ccagtgccgc gcggcagccg aacatgttgc
     2281 tgccgatctc aagtcgatcg gttttgaggc gtccgtgcgc ccaacggccg gccatccggt
     2341 cgtggtcggc aagtcgaaca gcgctacagg tccgcgggtg ctgttctatg ggcactacga
     2401 cgtccagccg gtcgatcccc taaatttgtg gaagacgccg cctttcgagc cacgcattga
     2461 aacgttgccg gatggccgca agatcattgt tgcgcgtggc gcatgcgacg acaaaggcca
     2521 ggcgatgacg ttcattgagg cctgccgtgc attcaaagtc gttaccggca agctgccatt
     2581 gcctatcacc atgctgatag agggcgaaga agaatgcggc tccaagaatt tgttcggctt
     2641 cgttcgcgac aatgcggctg agttcaaact ggacttggcg ctcgtgtgcg atacggccat
     2701 gtgggatcaa aagacgccgg ccgtgaccac ctcactgcga ggcctcattt acgaagacgt
     2761 caagatcatc tgcgcggatc gcgatcttca ttccggcgtc ttcgggggcg ccgcacaaaa
     2821 tccactccgg ctcctggccg aaattctcgg tgcgatgtgg gacgataaag gccgcgtcac
     2881 cattcccggc ttttacgacg gcgtgaaaga tctgccatcc gacatcaagg ccgatctcaa
     2941 ggccctcgat ctgacggcag agaaattcct gggtccgatc gggctcaaga atccggccgg
     3001 tgaaaaagac cgcctcgtaa tcgagcaggt gacgaccagg ccgacagccg agatcaacgg
     3061 catcattggc ggatacacgg gggagggcgc gaaaaccgtc atccccggcg aagcgagcgc
     3121 gaaggtttcg ttccgtcttg tcggggagca gaaccccgag aaaatccgcg atgcctttcg
     3181 ggactttata cgggcgcgcc tgcccggcga ctgcaaggtc gagttcggca atttcgctct
     3241 ggcgccagcg atccagctct cctttgacaa tccggcgctc accaaggcgc ggggcgtcct
     3301 cgctgaagaa tgggggcaca aggcggtggc agtgggcgca ggagggtcga tcccgattgt
     3361 ggcggacttc aaaaatgtgc tggggatgga ttctttgctc gtcggcttcg cgcttgacga
     3421 cgatcgcgtc cattctccga acgagaagtt cgacctcaag tgcttccaca aaggcatcag
     3481 gagctgggcg cgcattctcc atgccctggc gagctagcag tggacatacc ggctcaaatt
     3541 cgtatcaaca actacttttt gagcttgtag ccagtcctga acatccacca cactgtcaca
     3601 aggcaggctg caaaaaagag cagtgtcatg ccgatgctga cggcatggct cacgtcggca
     3661 atttcgaaaa agctccaacg aaatccgctc accaaatata cgactggatt gaacagcgat
     3721 atggtctgcc agactggcgg caacacgctg gtcgagtaaa aggtccctcc gaggaaggtc
     3781 aacggggtga tgatcagtag cggcacgatt tgcagctgtt caaagccgtc cgcccagatt
     3841 ccgataatga agccgagaag gctgaaggtc gccgccgtga gcaccagaaa ggtcaccatc
     3901 cagaacggat gcgctatgtg caggggcaca aacagccagg acgtcgccag gataatcaga
     3961 ccaagaatga tcgatttggt cgctgctgca ccgacgtacc caagaacgac ctcgaacggt
     4021 gacaccggcg ctgacaggat ctcgtagatg gtgcccgtga agcgcggaaa ataaattccg
     4081 aaagatgcgt tcatggtgct ctgggtaagc agcgtaagca tgatgagtcc gggcacgata
     4141 aaggagccgt aagggacacc ttcaatttcg gtaatccgtg aaccgatcgc tgcaccgaac
     4201 accacgaagt agagcgaagt ggaaagaacc ggcgaaacaa tgctttgcca gatggtccgg
     4261 cctgtccgcg ccatttcaaa accataaatt gctttgacag ctcgcaggtt cattgtctgt
     4321 cgctcaccag tccaacaaag atgtcttcca gcgaactctg gtttgtctgc aggtctcgaa
     4381 tccgcaagcc tgcgcgcgaa agctcgccga ggagcgttgc cactcccgtc cgctccgcct
     4441 gggtatcgta atcgtaaatc agtgtgctcc cgtcctcggc aatcgagagc ttaaagctgg
     4501 agagctctgg cggaatcgca gagagtctct gctgaagttc taatgtcagc tgcttcttcc
     4561 cgagtttgcg catcaattcg accttttcct caaccaggat gatctcaccc ttgttgatga
     4621 ccccaatccg gtcggccata tcttccgcct cttcgatgta atgagtggtc aggataatgg
     4681 tgacgccgga atttcgcagg tcgcgtacga cttgccacat atcctttcgc agctcgacat
     4741 cgacacctgc tgtgggttca tcgaggaaga gaatttgcgg ctcgtgcgaa agcgccttgg
     4801 caatcagtac gcggcgcttc atgccgcctg acagcgtcat gatctggttg tctttcttgt
     4861 cccaaagcga tagtgcgcgc agcacctttt cgatatgggc cgggtttttt ggcttgttga
     4921 agagaccccg actgaacgac acggtcgtcc acacgctctc gaaggcgtcg gtgtgcaatt
     4981 cctgtggcac aagccctatc aaggagcggg cggcccgata gtcggtgatg atgtcgtgac
     5041 cgccgaccgt gaccttgccc tcggtcggca ccaggattcc gcagatgatc ccgatcaacg
     5101 tggtcttgcc tgcgccattg ggtccaagca gagcgaatat ctcgccacgc cgaatgtcga
     5161 gattgacttc tttcagagcc cggaaaccgg acgcgtagct ttttgacaga tttctgatcg
     5221 aaataatcga ttgcatggga acgcgtcaga ggtgggatgc aacgcggcat ataggccgca
     5281 aaacctgata gcgccagtgc gtggaactgc gaccaaagtg ctaggcgtat tccgccaagc
     5341 cgccaaggtc gcgcaaggtc tgcgatgccg gaaagtctaa gtattcgtca ggcatattcg
     5401 cacgattgac ccacaacgcc ctgaagccaa ccgagacacc agccattacg tcccacctat
     5461 tggaggatac gaatgtcacg tcgccaggtt tgcatttgaa atgaccagtg accagacgat
     5521 agacctcggg ctgcggcttg aacattttca acgtgtcgac agacaacact gcatcgagat
     5581 cgctgcctat gccggccgct tccaccgcac ctttcagcat cgcaggcgag ccgttcgaca
     5641 gaatgccggt ttctcgccct ttgcttttca gtgcgcgtaa ggtcgagcgc gcgtcgggga
     5701 atgcgtcaag cgtgaaatag gcatccagga gcttggagcg cacggattta tctacgccag
     5761 gaatcaacgc gagcgagtag tcaagtgcgc gctcggtgac ccaccagaaa tccctgtagt
     5821 gtccggcaag tgtaagcgtc caggtgtatt caagctgttt ggttcgccag accgccgaga
     5881 tgcgatcggc gtcagatcct acctggtcgc ggtgacgtgc aatggcagcg tgcacatcga
     5941 agagcgtgcc atacgcatcg aagatgaaaa ctgacatcga cttcccccat cgcgggccga
     6001 tagctctttc cgccggtgat ggcgtaagat cgtgctcgaa acttggcggg ccagcccgac
     6061 caatccatga cgtctctgga cgggtgaaag tgcgtcatgg aggcgcgggg gcgcctgaca
     6121 agtaatggag attgcagaat gcccggacag ccttggtcga agacctggac cttttacgaa
     6181 ggggattggc acgagggcaa tatcccgatc atgggagtac gcgatcatgc cgcatggctg
     6241 tgctcatcgg tatttgacgg cgcccgcacc ttcgaaggcg tttcgccgga tctcgatctg
     6301 cattgcgccc gggtaaacgc ctcggctgaa acaatgcatc tcaagccatt ggtctcggaa
     6361 gaaacgtgga tgggccttgc atgggacggc agcaaacggt tcgagaagga cgcagcccta
     6421 tacatccgcc cgatgtattg ggcagagcgc agtgggacct tgctggtcgc ccccgatcct
     6481 gagtcgacaa agtggtgctt gagtctttac gaggcaccaa tgcgcaagcc ggagggtttt
     6541 tcgatcacgt tgtccccgta tcgcaaaccg agccttgaat gcatgccagt caatgccaag
     6601 gccggctgcc tctaccccaa caatgcacgc gcgttgcttg aggcgaatgc gcgcggttat
     6661 ggaaattgtg tcgtgctcga ccttctcggc aatgtggcgg agctcgccac tgccaacatt
     6721 tttatcgcga aggacggggt ggtgtttaca cctgcgccga acggaacatt tctcaacgga
     6781 attacccgtc aacgggtgat caagctcttg cgagaggctg gcgttaccgt gatcgagatt
     6841 gcgttgagct atcgtgacgt ccagaacgcc gacgaaattt tttcttccgg caattattcc
     6901 aaggtgatgc cggtcattcg tatcgacgaa cgctcgctgc agccagggcc gctctatcgc
     6961 aaggcgcggg aggtctattg ggactatgcg catgcgtgag cgcaacacgc gcgcgcccat
     7021 tggcattgtc ggcctaggcc tgatgggtga ggtctacgcg caacgcctga tcgacgcgaa
     7081 attttcagtt attggttttg acatagatcc cgcccgacgc aatcggctca gggaaatcgg
     7141 aggttcccct gtgtcctccg tcgccgagct ggcgcatccc tcgcattgca tcatcgttgc
     7201 cgtatttaac accgagcagg ttgaggatgt gatcgaaaac aagattttgc cggcgcttgg
     7261 cgatggctcg ggaaaaatcg tgctgtgcat gagcacgtgc gatcccgacc gcgtgacggc
     7321 acttgcacga cgcgttatcc cacgcggcat ccgctatctg gatgtgcctg tctcgggcac
     7381 aagtgatcag gtgcgccgtg gcg
//
LOCUS       DATDHO010000573         1694 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_374371, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000573 DATDHO010000000
VERSION     DATDHO010000573.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1694)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1694)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1694
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374371"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..>1694
                     /locus_tag="VIY07_10990"
     CDS             165..>1694
                     /locus_tag="VIY07_10990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HEY6382314.1"
                     /translation="MIANHAQLSAQSGTLQNYNAAVDLIERNLAARPDKIAYIDEDGR
                     YSFAELAQRVNRCANALTVLGLSMEARVIVCLTDTIDFPAIFLGAIKAGLVPVAVNTL
                     LTSNDYSFMLRDSRAQALIVSESLLPVFKPILDDQPFLKHVVVSGANPSGYLQLAALM
                     ASAGSNFVAAPTCADDACFWLYSSGSTGTPKGTVHLQTSPIRTAELYGQPILGIQEGD
                     VVFSAAKLFFAYGLGNALSFPLSVGATTVLLSERPTPASVCRILRQYRPTIFYGVPTL
                     YSALLASSELPKREDLNLRRCTSAGEALPPDVGRRWLEHTGVDILDGLGSTEMLHIFL
                     SNRPGEVRYGTSGKPVPGYDIRLIDEEGKPAAKGEIGELQVAGPTSAAFYWNNREKSR
                     NTFLGPWTKSGDKYIESEDGYFTYCGRADDMLKVSGIWVSPFEVEAALASHEAVLEAA
                     VVGHPDENELIKPKAFIVLRPNVLQTAELPTLLQQHVKSRLAPYKYPRWIEFVAELPK
                     TA"
BASE COUNT          360 a          519 c          449 g          366 t
ORIGIN      
        1 ctcataccat ttccaagcca cttttggaac ggctaaggct gccctgatcc actaggccag
       61 cgagattgaa atcgctgaat cctttggcaa gaatatctct gccgtacctg cttgatgaca
      121 agtctcattg tatagtaaag aggcagggtc accagagaaa gaatatgatc gccaatcacg
      181 cccagctgag cgcgcagtcg ggtacgctcc agaattacaa cgctgcggtg gacctgatcg
      241 aacgcaatct tgccgcgcgg cctgacaaaa tcgcctacat cgacgaggat gggcgttaca
      301 gtttcgccga gcttgctcag cgggtgaacc gctgtgccaa cgcgctcact gttctcggcc
      361 tgtcgatgga agcgcgggtc atagtctgtc tgaccgatac catcgatttt cctgccatat
      421 tcctcggcgc aatcaaggct ggccttgtgc cagttgccgt caacacgctg ctcaccagca
      481 atgattacag tttcatgctc cgtgacagcc gcgcccaggc cttgatcgtt tctgagtcgc
      541 tgcttcccgt attcaaacct atcctcgacg atcaaccatt tctcaagcat gtcgttgtat
      601 ccggcgctaa cccctcaggc tacctgcagc ttgccgcgtt gatggcgtca gcaggatcca
      661 attttgtcgc tgccccaaca tgcgccgacg acgcctgctt ctggctctac tcttcgggtt
      721 ccaccggcac acccaaggga accgtccatt tgcaaacgag tccaattcga actgccgaac
      781 tttacggtca gccaatattg ggtattcagg aaggggatgt cgtcttctcc gccgccaagc
      841 tattcttcgc gtacgggctt gggaacgcgc tcagttttcc gctttctgtt ggagcgacca
      901 cggttctgct cagcgagcgt ccgactccgg cgtcggtttg ccgcatcttg cggcagtacc
      961 ggccgacgat cttctacggc gtgccgacgc tttacagcgc gttgttggcc agctcagaat
     1021 taccgaaacg cgaggatctc aacctacggc gttgcacctc cgcaggagag gcactgcctc
     1081 ccgacgtcgg gcggcgttgg ctcgagcata ccggcgtaga catactcgat ggcctgggtt
     1141 ccaccgagat gctgcacatt ttcttatcga atcgcccagg cgaagtgcgc tacggtactt
     1201 cgggtaagcc tgttcccggc tatgacatcc gcctaataga cgaagaaggc aagcccgccg
     1261 ccaaggggga aatcggcgag ctgcaagttg ccggccccac cagtgccgcc ttttactgga
     1321 acaaccgcga gaaaagccgc aacacgttcc tcggcccatg gacaaagagc ggcgacaaat
     1381 acatcgagag cgaggacggc tacttcactt actgcggccg cgccgacgat atgctcaagg
     1441 tgagcggcat ctgggtttcg ccctttgagg tggaggcggc actcgcttcc cacgaagcag
     1501 tgctcgaagc cgcggtcgtc ggccaccccg atgaaaatga gttgatcaaa ccaaaggcct
     1561 ttatcgtttt gcgacccaat gtgctccaaa ctgctgaact gcctaccctg ttgcagcaac
     1621 atgtgaaaag ccggctcgcg ccgtacaaat acccgcgctg gatcgaattt gtggcggagc
     1681 tacccaaaac cgcc
//
LOCUS       DATDHO010000574         4122 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_424167, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000574 DATDHO010000000
VERSION     DATDHO010000574.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4122
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424167"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..823)
                     /locus_tag="VIY07_10995"
     CDS             complement(<1..823)
                     /locus_tag="VIY07_10995"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6382315.1"
                     /translation="MQKYFPRIVLMLGNVVVGMTILGPAGMLTELATGLGVGIHDTGL
                     LVTYGAVVLCIGSPLMAWLTTRIDRRLLLVVTLAVLAIGQGTSALTSNYSVILVLRVV
                     MLAIGALYTPQAAATVALIVPDRERPSAIAFVFLGWSIAIAGGLPLVTFVATNFSWQA
                     VYGALAGFAAIVAALLFVALPKGLKGAPLSPRSFVAIAENKRIMLILLVTLLQTCGQF
                     AVFVYLAPLLSALTGAGAAITGAFFAFYGVVGLIGNVVASSIVTALGTQKTLAVFL"
     gene            complement(1144..1413)
                     /locus_tag="VIY07_11000"
     CDS             complement(1144..1413)
                     /locus_tag="VIY07_11000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="usg protein"
                     /protein_id="HEY6382316.1"
                     /translation="MVSEDFRRQVSGYGLTTAHILYRRPDHRWLLQSYVWQNYDLFPE
                     FPELQRFLTFWMEKLEGPLHSVRVAHCKLIKPAELKAIDGEFRLH"
     gene            1794..2111
                     /gene="groES"
                     /locus_tag="VIY07_11005"
     CDS             1794..2111
                     /gene="groES"
                     /locus_tag="VIY07_11005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEY6382317.1"
                     /translation="MKFRPLHDRVVVKRIDAEEKTAGGIIIPDTAKEKPSQGEIIAVG
                     PGGRDEAGKLIPIDLKVGDTVLFGKWSGTEVKIDGQDLLIMKESDVMGVIEGGAAAKK
                     KAA"
     gene            2147..3781
                     /gene="groL"
                     /locus_tag="VIY07_11010"
     CDS             2147..3781
                     /gene="groL"
                     /locus_tag="VIY07_11010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509708.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY6382318.1"
                     /translation="MAAKDVKFSVDARDRMLRGIDILANAVRVTLGPKGRNVVLDKSF
                     GAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTSDIAGDGTTTATVLAAAIVKE
                     GSKAVAAGMNPMDLKRGVDLAVDAVVEHLKTNSKKVTSNEEIAQVGTISANGDTEIGN
                     FLAKAMQKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFITNADKMRVEMEDP
                     YILIYEKKLSGLQELLPLLESVVQTGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAV
                     KAPGFGDRRKAMLQDIAVLTGGQAISEDLGIKLENVTISMLGRAKKVMIDKENTTIVN
                     GAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATETEVKER
                     KDRVDDAMHATRAAVEEGILPGGGVALLRAVEGLKRLKTENEDQRHGVEIVRKALQTP
                     ARQIAINAGDDGSVVVGKILEKDQYNFGFDAQTGEYGNLVTKGIIDPTKVVRCAIQGA
                     ASVAGLLVTTEAMVAEVPKKEAAPAMPGGGMGGMDY"
     gene            complement(3971..>4122)
                     /locus_tag="VIY07_11015"
     CDS             complement(3971..>4122)
                     /locus_tag="VIY07_11015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HEY6382319.1"
                     /translation="RGYFVWSLLDNFEWQEGYSRRFGVIYVDFKTLKRTPKASYQWLA
                     KLIKG"
BASE COUNT          946 a         1214 c         1248 g          714 t
ORIGIN      
        1 caagaaagac ggccagcgtt ttctgggttc cgagtgccgt cacgatgctg cttgcgacga
       61 cgttaccgat cagcccaacg acgccataga atgcgaagaa ggcgccggta atcgctgcgc
      121 ccgcgccggt caatgcgctg agcagcggag ccagataaac gaaaacggcg aattgcccgc
      181 acgtctgcag cagtgtcacc agcagaatga gcatgatgcg cttgttctct gcgatggcga
      241 caaagcttcg tggtgagagc ggcgctccct taagtccctt gggcaacgcc acgaacaaca
      301 gcgccgcgac gatggcggcg aaaccggcca gagcgccgta gacagcctgc caactgaaat
      361 ttgtggcgac aaaggttacg agcggcagtc cgcccgcgat ggcgatcgac cagccgagaa
      421 acacgaaggc gatcgcgctt ggccgctcgc ggtcgggaac gatcaaggcg acggtcgccg
      481 ccgcctgcgg cgtgtacagc gccccgattg ccagcatgac gacccggagc acgaggatga
      541 cggaataatt cgatgtcagc gccgatgtcc cttgcccgat tgccagcacg gccagcgtga
      601 cgaccaggag aaggcgacgg tcaattcgcg tcgtcagcca agccatcagc ggcgagccga
      661 tgcacagcac aacggcgccg taagtcacga gcagaccagt gtcgtgaatg ccgaccccga
      721 gacccgtcgc aagctcggtg agcatgcccg ccgggccaag aatggtcatt ccgaccacga
      781 cgttgccaag catcaacaca atgcggggaa aatatttttg cacgtggact tcgctcgatg
      841 ccggcgcgtt tggaagttaa tgcttaagta gagcgccccc cgcttgtgtg ccatgcgcac
      901 cgcaatgccg ctcgttcaaa acatttgaat gccaaacgtc acagggattg atttccggca
      961 ccagagtcat gcccggccat agccgtccaa aggacggcgt cctttcgcac gcctatgtgc
     1021 cggacatcca gtcttgatcc gatgaaataa tgaagacgtg gatggccggg acaggcccgg
     1081 ccatgacggt gtcgattggc taggctttcg cccggccacg acaaatggct attaccctac
     1141 tactcagtgc aatctgaatt cgccgtcgat ggccttgagc tcggccggct tgatcagctt
     1201 gcaatgcgcc acgcgcactg aatgcagtgg cccctcgagc ttctccatcc agaacgtcag
     1261 gaaacgctgc aactcgggaa attcgggaaa gagatcgtag ttctgccaaa cgtaggactg
     1321 aagcaaccag cgatgatcgg gacgccgata caggatgtgc gcagtcgtca ggccataacc
     1381 actgacttgt ctacggaaat cctctgaaac cattttcgtc ctccgttctg gtcggactca
     1441 aagtttccat ttccggcaat gtccattgca agccgaaaag gtaaacaagt tgtttataat
     1501 caaggcacta gcagcaagaa ggttggcctg ctaacagccc cgacggcatg cctcgtgccg
     1561 gccgcgattg gtaacgtgac cgggtaaaat cacgttccca tcacatcgct gttaaccctt
     1621 ggggcgactg gatttttcag aattgttggc actcgccgta actgagtgct aaaaattttt
     1681 gcgatgcccc ttgcgagcaa aatggccgcc acccatgtgg cggccaggtg ctggcggggg
     1741 gatcagtcag cgccaaaata aaccaatttg tctaatagct taggaggact gccatgaagt
     1801 tccgtccgct tcacgaccgc gtcgtcgtca agcgcatcga tgccgaagaa aaaaccgctg
     1861 gcggcatcat cattcccgat accgcgaaag agaaaccttc gcagggcgaa attatcgccg
     1921 tgggcccggg cggccgcgac gaagccggca agctgatccc gatcgatctc aaggtcggcg
     1981 acaccgttct gttcggcaaa tggtccggca ccgaagtgaa aatcgacggt caggatctcc
     2041 tcatcatgaa ggagtccgac gtcatgggcg tgattgaggg cggcgccgcc gccaaaaaga
     2101 aggccgcctg aggccgaact gaaaaccaat tagaggaaca cgaacaatgg ctgctaaaga
     2161 cgtcaaattt tctgtcgacg cccgcgaccg catgctgcgc ggcatcgata tcctcgccaa
     2221 tgcggtgaga gtgacgctcg gcccgaaggg ccgcaacgtc gtgctcgaca agtcgttcgg
     2281 cgctccgcgc attaccaagg acggtgtgac ggtcgccaag gaaattgagc tggaagacaa
     2341 gttcgaaaac atgggcgcgc agatggtgcg cgaggtcgca tccaagacct cggatatcgc
     2401 cggcgacggc accaccactg ccacggttct cgcggcagcg atcgtcaagg aaggttccaa
     2461 ggcggttgcg gcgggcatga acccgatgga tctcaagcgc ggtgttgatc tcgccgtcga
     2521 tgccgtggtc gagcatctca agaccaactc gaagaaagtt acctcgaacg aggagatcgc
     2581 ccaggtcggc acgatctccg ccaacggcga caccgagatc ggcaacttcc ttgccaaggc
     2641 catgcagaag gtcggcaacg agggcgtgat cacggtcgaa gaagcgaagt cgctcgagac
     2701 cgagctcgac gtggtcgagg gcatgcagtt cgaccgcggc tacatctcgc cctacttcat
     2761 caccaacgcc gacaagatgc gggtcgagat ggaggacccc tacatcctca tttacgagaa
     2821 gaagctgtcg ggcctgcagg agctgctgcc gctgctggag tcagtggtgc agaccggcaa
     2881 gcccctgctc atcatcgccg aggatgtcga gggcgaggcg cttgccacgc tcgtcgtcaa
     2941 caagctgcgc ggcggcctga aggtcgcggc agtcaaggcg cccgggttcg gcgatcgccg
     3001 caaggccatg ctgcaggata tcgccgttct gaccggcggt caggcgatca gcgaagatct
     3061 cggcatcaag ctcgagaacg tcacgatctc catgctcggc cgcgccaaga aggtcatgat
     3121 cgacaaggag aacacgacga tcgtcaacgg tgcaggcaag aaggccgaca tcgaggcgcg
     3181 cgttgcccag atcaaggcgc agatcgagga gaccacctcc gactacgatc gcgagaagct
     3241 gcaggagcgg ctggccaagc tcgccggcgg cgttgcggtg atccgcgtcg gcggcgccac
     3301 cgagaccgag gtgaaggagc gcaaggatcg cgtcgatgac gcgatgcacg ctacccgcgc
     3361 cgcagtcgag gaaggcatcc tgccgggcgg cggcgtcgcc ctgctgcgtg cggtcgaggg
     3421 cctgaagcgc ctcaaaaccg aaaacgagga ccagaggcac ggtgtcgaga tcgtgcgcaa
     3481 ggcgttgcag acgcctgccc gccagatcgc gatcaacgcc ggcgatgatg gctccgttgt
     3541 ggttggcaag atccttgaga aagatcagta taacttcggc ttcgatgcgc agaccggcga
     3601 gtacggcaac ctcgtcacca agggcatcat cgacccgacc aaggtcgtgc gttgcgcgat
     3661 ccagggggcg gcctccgtag ccggcctgct ggtcacaacc gaggccatgg tcgccgaagt
     3721 gccgaagaag gaggccgctc cggcgatgcc gggcggcggc atgggcggga tggactacta
     3781 atcggtcacc cgaagcaaaa ccaggcccgg gttttccccc gggccttcat ttttttgctg
     3841 ctagcgaaag atcacgaata cttaaggacg cgattaggca cggacgcggc cgctgcacgg
     3901 cggctctcgg gacgggcctt gaaatccgcg ataatctcct atcccaagga ttcaagccca
     3961 aagcagagag ttaacctttg ataagttttg ctaaccattg gtacgatgct tttggcgtgc
     4021 gcttgagcgt cttgaaatcg acgtagatca ctccaaagcg tcggctatag ccttcctgcc
     4081 attcgaaatt gtcgagcagc gaccaaacga aatagccgcg ca
//
LOCUS       DATDHO010000575         2476 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_424246, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000575 DATDHO010000000
VERSION     DATDHO010000575.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2476
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424246"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="VIY07_11020"
     CDS             complement(<1..407)
                     /locus_tag="VIY07_11020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382320.1"
                     /translation="MQRNTKKFLLGTVALLAGVGLASAQGMREGAGSAGSAPDAGMSS
                     GSSGAKTSPGSSGGSETKGKSESRGAGAADQGRGQAQNAQPGKDRMGGQAKSERAPKS
                     TTGQGSSEKDDMKAQSSQKPDKDQMKAKSSQKD"
     gene            634..831
                     /locus_tag="VIY07_11025"
     CDS             634..831
                     /locus_tag="VIY07_11025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382321.1"
                     /translation="MSRAEQYRHLASDVRNRAERESNPILKAEWENLAETYVRLAEQS
                     DEWSADLTYDPIQDMLDRTRH"
     gene            complement(857..1879)
                     /locus_tag="VIY07_11030"
     CDS             complement(857..1879)
                     /locus_tag="VIY07_11030"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEY6382322.1"
                     /translation="MSAAGGHSGTLSPRRHRRLWSALIGGALLLAGFNRRTAETHPTD
                     VPIPAPAKGRTGVQARSKARRAWLEILRLLYSAIGQHRVVSIAAGVTFFVLLAIFPAI
                     AALVSVYGLFADPNTIRMHLDELSTLLPGGAIEIVGDQLNRVASGGTSTLGATFLFTL
                     ALSLWSANAGMKALCDALNIVYDAEERRGLIKLNAVSLAFTAGALLVLLLALGAIVVL
                     PAVMNYLGLESIGGTLIMLARWPALYMLVVLALAIIYRFGPDREHAQWHWITWGSALA
                     ALAWIAASILFSWYAENFGSYNKTYGSLGAAVGFMTWIWISNMVILGGAEIDAVLERL
                     DRGTAK"
     gene            complement(1880..2278)
                     /locus_tag="VIY07_11035"
     CDS             complement(1880..2278)
                     /locus_tag="VIY07_11035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382323.1"
                     /translation="MPTSAQLERKAERARERLSDRIADLRYHVSPTTVASDLLGAMNA
                     RNLGDEVLPILAKQARNNPIASLLIAAGVGWLIFSEVRGPIAKSLGLPKNLDLSKTLG
                     LTASRRSSTRGRKKRRTTTNSKAAGKGRNK"
     gene            complement(2283..>2476)
                     /locus_tag="VIY07_11040"
     CDS             complement(2283..>2476)
                     /locus_tag="VIY07_11040"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEY6382324.1"
                     /translation="AAVTGLVAYGFSWPVATLIVATATLIIGAGLIWLGVNRLSLARL
                     APSKTLEQLQKDSNIANMR"
BASE COUNT          490 a          735 c          749 g          502 t
ORIGIN      
        1 tcatcctttt gcgagctctt tgccttcatc tgatccttgt cgggcttttg ggagctctgc
       61 gccttcatat cgtccttctc ggacgaacct tgcccagtcg ttgatttcgg cgcccgttcg
      121 gatttcgcct gtccgcccat ccggtccttg cctggctgag cgttctgcgc ttggcctcgg
      181 ccctgatcgg ccgcgcctgc gccgcggctt tcgctcttac ccttggtttc gctaccgcct
      241 gacgatccgg gcgatgtctt tgcgccggac gaacccgacg acatgccggc atcgggtgcg
      301 ctccccgcgc tgccggcgcc ttctcgcatc ccttgtgccg atgccaggcc aacgcccgcc
      361 aacagcgcaa cggttccgag caagaacttc ttcgtattgc gttgcattgt acgttcctct
      421 ctgattgttc ccgaaagcca tggctcccac ttgcactcaa gaagaaccga tgcgtaggcc
      481 aatccgttcc cattgggagg cctgatcgga cacgagaggt tgatgtccgg acaggaaccg
      541 tgctgagccc ggcaagtgag ttccgcagga acggaatgcc ggttcctatg ttggccctaa
      601 gacagtcagg gaggaaagca gcggagttcg ccaatgagcc gagctgaaca atatagacat
      661 ttggcctctg acgttcgcaa tcgggcagag cgggaatcaa acccgatttt gaaggccgag
      721 tgggaaaatc tggcggaaac ttatgtccgg ctggcagagc agtcggacga gtggagtgcc
      781 gatctcacgt acgatccgat ccaggacatg ctggatcgga cgcggcattg atcggcctcg
      841 acgcgatctg gaacaattat ttcgcggtgc cacgatcgag gcgctccagg acagcgtcga
      901 tctcggcacc gccaaggatc accatgttcg atatccagat ccatgtcatg aagccaacgg
      961 ctgccccgag tgagccgtag gttttgttat agctgccgaa attctccgca taccacgaga
     1021 acaagatcga ggccgcgatc caggcaaggg cagccaaggc gctgccccag gtgatccagt
     1081 gccattgcgc gtgctcgcgg tcagggccaa agcggtaaat gatggccagg gcaagaacta
     1141 ccaacatgta gagtgcgggc cagcgcgcca gcatgatgag cgttccgccg atgctctcga
     1201 ggcccagata gttcatgacc gccggcagta cgacaatcgc gcccaatgcc agcaagagaa
     1261 ccagaagcgc gccggccgta aacgcgagcg agactgcatt cagtttgata agtccgcggc
     1321 gttcctccgc gtcatagaca atgttcaggg cgtcacagag cgctttcatt cccgcattgg
     1381 cgctccacag cgacagagca agggtgaaaa ggaatgttgc gcccagagtg cttgttccgc
     1441 ccgatgcgac gcgattaagt tgatcgccga cgatctcgat tgctccaccg ggcagcaatg
     1501 tcgagagttc gtcgagatgc atccggatcg tgttcggatc cgcgaaaagc ccatacaccg
     1561 aaacgagcgc ggcgatcgca gggaatattg cgagaaggac aaaaaacgta accccggcgg
     1621 cgatcgagac cacccggtgc tggccaatcg cgctgtagag aagacgcagg atttcgagcc
     1681 atgcacggcg tgctttcgag cgagcctgca ccccagtccg gcctttggcc ggcgccggga
     1741 ttggcacatc tgtcgggtgc gtttccgctg ttcggcggtt aaatcctgcc agcagcaggg
     1801 cgcccccgat cagggcggac cacagccggc ggtgcctgcg agggcttagc gtccccgaat
     1861 ggccgccggc tgccgacact tatttgttcc gtcccttgcc cgccgccttg ctgttggtcg
     1921 tcgtgcgcct ctttttcctc ccgcgggtcg acgaccggcg agacgctgtc agaccaagcg
     1981 tcttggaaag atcaaggttt ttggggagac caagactctt ggcaattggg ccgcgaactt
     2041 cggaaaatat cagccatccc acgccggcgg cgatgagaag ggaggcgata gggttgttac
     2101 gagcctgttt tgccagaatg ggcagaacct cgtctcccaa gttgcgggca ttcatggctc
     2161 ccagcaggtc gcttgccacg gttgtcggcg agacgtgata gcgcagatcg gcgatccggt
     2221 cggaaaggcg ctcgcgggcc cgttccgctt tgcgttcaag ctgtgctgac gtcggcatat
     2281 aatcacctca tgtttgcgat gtttgaatct ttttgcagtt gctcgagggt cttcgagggc
     2341 gcgagacgag ccaggctcag gcggttgacg cccagccata tgagacctgc cccaatgatg
     2401 agagtggccg tggctacaat gagtgtcgca actggccagg agaagccgta agccacgaga
     2461 ccggtgacgg cggctt
//
LOCUS       DATDHO010000576         1649 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_73626, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000576 DATDHO010000000
VERSION     DATDHO010000576.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_73626"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..493)
                     /gene="mazG"
                     /locus_tag="VIY07_11045"
     CDS             complement(<1..493)
                     /gene="mazG"
                     /locus_tag="VIY07_11045"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HEY6382325.1"
                     /translation="MKPSRDISRLIEIMAGLRTPGSGCPWDLEQSFRTIAPYTIEEAY
                     EVADAIARDDLVGLKDELGDLLLQVVFHARMAQEQGAFDFADVVETITTKLVRRHPHV
                     FADAEGKTAKSVEGLWERIKAEEKAERGEEAPGGALAGVPVALPALTRALKLQDKAGR
                     VGFD"
     gene            complement(684..1484)
                     /locus_tag="VIY07_11050"
     CDS             complement(684..1484)
                     /locus_tag="VIY07_11050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6382326.1"
                     /translation="MTLTFTILGCGSSMGVPRVALGWGSCDPENPKNRRRRCSLLVER
                     RNAHGHRTRVLVDCSPDLRMQLLDAQVDWLDGVLITHEHADHTHGIDDLRPLFVHKRR
                     RVDVYLDEPTSRAMHARFGYCFMTPPGSEYPPIAAEKRLVAGKPVTINGQGGPVEALP
                     VLQDHGDIPSLGFRFGNVAYSADIKSLPADSISALAGLEVWIVDALRKSPHPSHFNLD
                     EALEWIARIKPRRAILTNLHTDMDYAALCAQLPPAVEPAYDQLTFSGS"
     gene            complement(1481..>1649)
                     /locus_tag="VIY07_11055"
     CDS             complement(1481..>1649)
                     /locus_tag="VIY07_11055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEY6382327.1"
                     /translation="PLPYRGKRNEPAYVVETAKVLADARGAAADEIARQTTENFFRLF
                     SKVPRVLADAA"
BASE COUNT          323 a          500 c          508 g          318 t
ORIGIN      
        1 agtcaaaccc cacccgtccg gccttgtcct gcagtttcaa tgcgcgggtt aacgcgggca
       61 gggcaaccgg tacccccgcc aatgctccgc ccggcgcctc ctcgcctcgc tcggcctttt
      121 cttcggcctt gatccgttcc cacaggcctt cgaccgactt ggcggtcttg ccctcggcat
      181 ccgcaaagac gtgcgggtgc cggcgcacga gcttggtggt gattgtttcg accacgtcgg
      241 caaaatcgaa ggcgccttgc tcctgtgcca ttcgggcgtg gaagacgacc tgcagcaaga
      301 ggtcgccgag ttcatccttc aaccccacga gatcatcacg ggcgatcgcg tccgcgacct
      361 cgtaggcttc ctcgatcgtg tacggagcga tggtgcgaaa actctgctcc aggtcccatg
      421 ggcagccgct gcctggcgtc cgcagacccg ccatgatctc aatcaggcgg gagatgtcgc
      481 gggacggctt cactgggctg cagaccggag ggagggtttt ggtgctggtc gggccaaggc
      541 tatcaaacca tgtctcctcg gataatcctg gatggcagat tcgcataaga catattatgg
      601 aatatttctg ggtgctgttt cgaggctgca aaaagcccaa gaataatttg gataaaaaca
      661 cgagacgtcg ggcccaatgt ggctcacgac cccgaaaagg tcagctggtc ataagcaggc
      721 tctactgccg gcggcagctg cgcgcacaag gccgcatagt ccatgtcggt atgaagattg
      781 gtcagaattg cacgcctggg cttgatcctc gcgatccatt ccagtgcctc gtcgagattg
      841 aaatggctcg ggtgtgggct cttgcgcagc gcgtccacga tccagacctc gagtcccgca
      901 agcgccgaga tgctgtcggc aggcaggctc ttgatatcag ccgaataggc cacattgcca
      961 aagcggaagc ccaaggacgg gatatcgccg tgatcctgca gaaccggcaa cgcctcgacc
     1021 gggccaccct gtccgttaat ggtgaccggc ttgcccgcga ccaggcgctt ttcagcggca
     1081 atgggcggat attcgctgcc gggcggcgtc atgaagcaat agccgaagcg ggcatgcatg
     1141 gcacgcgagg tgggctcgtc gagatagaca tcgacgcggc ggcgcttgtg gacgaacaaa
     1201 ggccgtaggt cgtcaatacc gtgagtatgg tcggcgtgtt cgtgcgtaat cagcacgccg
     1261 tcaagccagt caacctgggc gtcgagcagc tgcatgcgaa gatccggcga gcaatcgacc
     1321 agcacgcgtg tgcggtgccc gtgcgcgttc cggcgctcga ccaacagcga gcagcgtcgc
     1381 cgtcggttct ttggattttc cggatcacag gagccccagc ccagcgcgac gcgcggcaca
     1441 cccatggacg aaccgcagcc gagaatggtg aaagttaatg tcatgcggcg tcggctaaca
     1501 cgcgtggcac cttactgaag agccggaaaa aattctccgt cgtctgccgc gcaatttcgt
     1561 cggcggctgc gccgcgcgca tccgctaaaa ctttagcggt ttcgactacg tacgcgggtt
     1621 cattgcgttt tccccggtac gggagcggc
//
LOCUS       DATDHO010000577         2132 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_127385, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000577 DATDHO010000000
VERSION     DATDHO010000577.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_127385"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..1119)
                     /gene="argC"
                     /locus_tag="VIY07_11060"
     CDS             complement(61..1119)
                     /gene="argC"
                     /locus_tag="VIY07_11060"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEY6382328.1"
                     /translation="MANKANIGVLGASGYTGGELVRMLLRHPRAEIVLLTAERSAGKA
                     MREVFPHFSPFALPQLVAVDGLDWAGAALDVAFCALPHATTQKVIRELLKQSPTTKVV
                     DLSADFRLADTSAYAKWYGHEHHAPELQKEAVYGLTEIHRRDIKKARLIANPGCYTTC
                     AQLPLVPLLKNKAIELDEIVIDAKSGMTGAGRAAKEAMLFSEVSEGFHAYGVGHHRHM
                     AELDQEFSLAAEREVTVTFTPHLVPMNRGILSTIYVRGRRGRTPEDLHELLLKFYVKE
                     PFVHVLPFGETPQTRHVRGSNMTFIGVAKDRLPGRAIVISALDNLVKGASGQAIQNMN
                     LIMGWPETMGLEQVALFP"
     gene            complement(1530..>2132)
                     /locus_tag="VIY07_11065"
     CDS             complement(1530..>2132)
                     /locus_tag="VIY07_11065"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6382329.1"
                     /translation="NLQAAGIDRNVVDVVIISHFHGDHINGLVGPENKPAFPNAEIMV
                     PEAEAAFWADEGNAARLPEPMRPQMGNVKRVMGIVGGRVTKYQSGKELVPGITAIASH
                     GHTPGHTSHIVASGNGKVLVQGDVTAGAATLFVRNPDWQPLFDTDKPQAVQTRRKLYD
                     MASSDKMMVQGYHFAFPSMVYVEKSGNGFRLVPAPWSSSI"
BASE COUNT          437 a          664 c          612 g          419 t
ORIGIN      
        1 actcagccag tgtatccgga ttcccggtca caccctaccg gagcgtcccg ggacgacaaa
       61 tcatggaaac agcgctacct gctcgagtcc catggtttcg ggccagccca taatcaggtt
      121 catgttctgg attgcttgcc cggaagcgcc tttgaccaga ttgtccagtg ccgaaatgac
      181 aatcgcgcgg cccggaagac ggtccttggc tacgccgata aaggtcatat tggaaccgcg
      241 cacgtgccgc gtctgcggcg tctcgccgaa cggcagcacg tgcacaaacg gctccttcac
      301 gtagaacttt aaaagcaact catgaagatc ttccggcgtc cggccgcgcc ttcctcgcac
      361 gtagatcgtc gacagaattc cacggttcat tggcaccagg tgcggcgtga aggtaacagt
      421 tacctctcgc tcggcagcga gcgaaaactc ctgatcgagt tcggccatgt gccgatgatg
      481 tcctacgccg taggcatgaa agccttccga gacctccgag aacagcatgg cctcctttgc
      541 cgcccgcccc gctccggtca tgcctgactt ggcatcgatg acgatttcat cgagctcgat
      601 cgccttgttc ttgagcaagg gaacgagcgg aagctgcgca caggttgtgt agcagccggg
      661 attggcgatc agtcgcgctt tcttgatgtc ccgccggtga atctcggtga gcccgtagac
      721 cgcctccttc tggagctcgg gcgcgtgatg ctcgtggccg taccatttcg cgtaagccga
      781 ggtgtccgcc aggcgaaagt cagcagagag atcgacaacc ttcgttgtcg gcgattgctt
      841 cagcagttcc ctgattacct tttgcgtcgt cgcatgcggc agggcgcaga acgcaacatc
      901 gagcgctgca ccagcccaat caagcccatc gaccgcgaca agctgcggca gcgcaaaagg
      961 cgagaaatgc ggaaatacct cgcgcatcgc tttgccggca ctgcgctccg cggtcagcag
     1021 aacaatctcg gcgcgcggat ggcgcaacaa catgcgcaca agctcgccgc cggtataacc
     1081 cgaggcgccc aacacaccga tgttcgcttt gttagccatg agtcgatccc tatccagaag
     1141 tcttaaagaa cgaccggaag aaggccaaca gcgcggtttg gattggggac acgtgccgca
     1201 gcctcaaatc cggcggcacg ggtgacgcaa atgctatgcc cgtgccaggg tggcacggcg
     1261 acggcgaaca tttcttgctg cgaccagcat ggtcatggga ggggcgtata ggctgcacgc
     1321 cccgccgggt caactctcgc gacgcattta ccgcagcgag tgcacgcgtc gatcatttct
     1381 gccgtgcgtg tggcaagcgc cgttcgaaaa cagttgccat cacgacgtcc tggtccgata
     1441 tcccatgcta aacgccgcac ccggccagca gcgcaaagga aaaaggccgc cggatgcggc
     1501 ggccttgcgc actcactgat tactccggac tatatcgacg agctccatgg cgccggcact
     1561 agccggaacc catttccgct cttctccacg tagaccatcg aggggaaagc aaagtgatag
     1621 ccctgcacca tcatcttatc gctcgacgcc atgtcgtaaa gcttgcggcg cgtctgaacg
     1681 gcctgcggtt tgtcggtatc gaagaggggt tgccagtcgg gattgcgcac gaacaatgtc
     1741 gccgcacccg cggttacgtc gccctgcacc aaaaccttgc cgttgcccga tgccacaata
     1801 tgtgaggtgt ggccgggcgt gtgaccgtgg ctggcaatcg cggtaatgcc cggaacgagc
     1861 tccttgcccg actggtactt tgtcaccctg ccgccgacaa tgcccatcac ccgcttgacg
     1921 ttacccatct gtggacgcat cggctcaggt agtctggcgg cgttgccttc atcggcccag
     1981 aatgcagcct cggcctccgg caccatgatt tcggcatttg gaaacgctgg cttgttctct
     2041 ggcccaacga ggccgttgat gtgatcgcca tggaagtgcg aaatgatgac gacatcgact
     2101 acattgcggt cgataccagc ggcctgcaag tt
//
LOCUS       DATDHO010000578         1856 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_374742, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000578 DATDHO010000000
VERSION     DATDHO010000578.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1856
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374742"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..527)
                     /locus_tag="VIY07_11070"
     CDS             complement(<1..527)
                     /locus_tag="VIY07_11070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY6382330.1"
                     /translation="MSRVYAVRIHRNGGPEELRYEEVEVGEPGPGEARVRHTAIGLNF
                     TDIHHRTGRYPVSQFPHVIGMEATGVVEAVGEGVSEVRPGDRVAYASEKPRAYSQATV
                     MPITRLVKLPDFIDDETAAAVILKGLTAQYLIRGAHPVSAGETVLIQAAAGGVGLIMC
                     QWAQHLGARVIGTVST"
     gene            complement(544..1212)
                     /locus_tag="VIY07_11075"
     CDS             complement(544..1212)
                     /locus_tag="VIY07_11075"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HEY6382331.1"
                     /translation="MSGALGAFIDLSHRITEELSRIPSFPQPRIRQITTIPQHRANVT
                     EVQMVVHHGTHLDAPRHFIADGPTIDQIPLERLYGPGVIWRIDVADCGLIDVADLERA
                     TPRMQEGDIVLLDTGRARHVNTEKYMNHASLTPGAAEWLVKRGAKIVGVDFATPDLAA
                     RLRPPDFAFPVHYTLLSQGVLIAEHVTNLGSLAGQRAEIMFLGLNVAGSDGAQARVIA
                     RPLG"
     gene            complement(1292..>1856)
                     /locus_tag="VIY07_11080"
     CDS             complement(1292..>1856)
                     /locus_tag="VIY07_11080"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF044865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6382332.1"
                     /translation="PVSGGPRGARAGTLSTMVAGDRSIFERTRPLFEAIARNVFYIGT
                     DPGLAQITKLANNMISAAGMASAFEAVAMAVKAGVDARTLIDTINASTGRNTATTDKI
                     PTSVLPRTFDYGGKLATMHKDIELCLAEAKRLKVPMWVNSAVVQLWFQAVTEGRGEDD
                     YTTLIQMIEEWAGVTVGGNEPGHLKKG"
BASE COUNT          347 a          587 c          549 g          373 t
ORIGIN      
        1 gtactcacag tgccgatcac ccgcgccccg agatgttgcg cccattggca cataatcagg
       61 cccacgccgc cggcggcggc ctgtatcaga acggtttcgc cggcgctgac cggatgggca
      121 ccgcgaatga gatattgcgc ggtcagacct ttcaaaatca ccgctgcagc cgtctcatcg
      181 tcgatgaaat ctggcaattt taccagccgc gtaattggca ttacggtcgc ctgcgaatag
      241 gcgcgcggtt tttccgacgc gtaggccacc cgatcgccgg ggcggacttc gctcaccccc
      301 tcgccgaccg cctcgaccac accggtcgct tccatgccaa tcacgtgggg aaactgcgac
      361 accggataac gtccggtgcg atggtggata tcggtaaaat tgagtccgat ggcggtgtgt
      421 cggacgcgag cctcacccgg tcccggctcg ccgacctcaa cttcctcata acggagttct
      481 tccgggccgc cattcctgtg aattcggacg gcgtagacgc gactcatgcg attctccttg
      541 aatctaacca agcgggcggg cgatcaccct cgcctgcgca ccgtcagagc ctgccacatt
      601 gaggcccagg aacatgatct cggcgcgctg tccggcgagg ctgccgagat tggttacgtg
      661 ttcggcgatc aatacgccct ggctgagcag tgtgtaatgc accggaaagg cgaaatccgg
      721 cggtcgcaac cgggccgcca gatccggcgt tgcaaaatcc acaccgacaa tcttcgcgcc
      781 gcgcttgacc agccattccg ccgccccggg cgtgagtgaa gcgtgattca tgtacttttc
      841 ggtgttgacg tggcgcgcgc gtccggtgtc gagcagcacg atatcccctt cctgcattcg
      901 tggggtggcc cgctcaagat cggcgacatc gatcaggccg caatccgcga cgtcgatccg
      961 ccagatgacg ccgggcccgt agagccgctc gagcggaatc tggtcgatgg tcggcccatc
     1021 ggcgatgaag tgccggggtg catcaagatg ggtgccatga tgaacaacca tctgcacctc
     1081 ggtcacgttg gcgcgatgtt gcgggatcgt cgttatctgg cggatacgtg gctgcggaaa
     1141 cgacgggatg cgcgagagct cttccgtaat ccgatgcgag aggtcgatga aggcgccgag
     1201 cgcgccggac accttgggcg caggtaaatc gcgccatccc ttccagccat aagacttatt
     1261 cgccactgcc tcgcacataa cgcgatcctc ttcagccttt tttcagatgc cctggttcgt
     1321 tgccgccgac tgtcacaccg gcccattcct cgatcatctg aatgagcgtt gtatagtcgt
     1381 cctcgccgcg cccctcggtc acagcctgga accaaagctg tacgaccgcc gaattgaccc
     1441 acatcggaac cttaagccgt ttcgcctctg ccagacaaag ctcgatgtcc ttgtgcatgg
     1501 tcgcaagttt gccgccatag tcgaaggtgc gcggcagcac cgaggtggga atcttgtctg
     1561 tcgtagccgt gttgcgacca gtgctggcgt tgatcgtatc gatgagcgtg cgcgcgtcca
     1621 cgcccgcttt taccgccatt gccaccgctt caaaggcgga agccatgccg gcagccgaga
     1681 tcatgttgtt ggcaagtttg gtaatttgcg cgagaccggg atcggtgccg atgtagaaga
     1741 cattgcgagc aatcgcctca aacagcggcc gcgttcgctc gaagattgat cggtcgccgg
     1801 ccaccattgt cgagagcgtg cctgctctag ctccacgcgg cccgccgctg acaggt
//
LOCUS       DATDHO010000579         1933 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_276378, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000579 DATDHO010000000
VERSION     DATDHO010000579.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1933)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1933)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1933
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276378"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /locus_tag="VIY07_11085"
     CDS             complement(<1..424)
                     /locus_tag="VIY07_11085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HEY6382333.1"
                     /translation="MFSSIFVDRPRLAVVIALVTAIAGLVSLLAIPIAQFPDIVPPQV
                     SVTASYPGASSEVVDTTVAQVIESQVIGVDKMIYMKSISGNDGSYSLLVSFELGTNPD
                     INTVNVNNRVQVALAKMPDEVRRSGVRVQKKSSALLAVI"
     gene            complement(429..1532)
                     /locus_tag="VIY07_11090"
     CDS             complement(429..1532)
                     /locus_tag="VIY07_11090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY6382334.1"
                     /translation="MRAIVASFALGLSFVVAAQAQQPAAPTVTVITAEKRPVTESVRF
                     VGRIQAIERVDVRARVTGFLEEALFQDGDRVKTGAPLYRIEKGPFEAAVEQAKATLLR
                     AQAQSDNATIQRHRAEDLLRSSAGSVATRDDRVAAEKATQGDVAAAEAALKTAEINLA
                     YTDINSPIDGRIGRTAVTRGNVVGPDSGVLTTIVSSDPMYVTFPVSQREFVRIFPPGR
                     DGQAAIKNSKVVVQMSNGPVYPHTGKIDFVDVKVDQATDTISVRATLPNPDGRLADGQ
                     LVQVSVEGDKPEERIVVPQAALIADQQGIYVFIVENGKAVMRRVKVGQTVGGSIVITE
                     GLSGGELVVTSGMQGLRPGLAVMAVPTEKPIGG"
     gene            complement(1543..>1933)
                     /locus_tag="VIY07_11095"
     CDS             complement(1543..>1933)
                     /locus_tag="VIY07_11095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382335.1"
                     /translation="AAKASEYMRKQAAADAEKKALLDKLKGPSGVSDEERLKRAAAII
                     NRAVNNGLTEIEVGRFPNSLFTDHGRAINQQEAGWEKTLTGLPKELFEFWKQFLQPKG
                     YRLKFQIVDWSGGKPGDIGISLSWGQK"
BASE COUNT          375 a          586 c          547 g          425 t
ORIGIN      
        1 cgatgactgc gaggagcgcg gacgacttct tttgcacacg cacgcccgat cgcctgacct
       61 cgtccggcat tttcgccagc gccacctgaa cacgattgtt cacattgacc gtattgatgt
      121 ccgggtttgt gccgagctcg aacgacacca gcagcgaata gctgccgtcg ttgcccgaaa
      181 tgctcttcat gtagatcatc ttgtcgacgc cgatgacctg cgactcgatc acctgcgcca
      241 cggtggtatc gaccacttca gatgacgcgc cgggatagct tgcggtcacc gaaacctgcg
      301 gcggcacaat gtcgggaaac tgcgcgatag gaatggcgag gagcgaaacc aacccggcga
      361 ttgccgtcac cagcgcgatg acgaccgcaa gtcgcggtcg gtcgacgaaa atggacgaaa
      421 acattgcgtc agccgccgat cggtttttca gtcggtacgg ccatcacagc caggccgggg
      481 cgaaggccct gcatgccgct cgtgacgacg agttcaccac cggacaggcc ttccgtgatg
      541 acgatcgatc cgcccaccgt ctgccccact ttcacacgcc gcatgaccgc ctttccattt
      601 tctacaataa agacgtagat accttgttgg tcggcaatca acgcggcctg cggcacgacg
      661 atacgctcct ccggcttatc gccttccaca ctgacctgaa cgagctgccc atcggcaagc
      721 cttccgtcag gatttgggag ggtggcacgg accgagatgg tgtcggtagc ctgatcgacc
      781 ttcacatcga cgaaatcgat cttgccggtg tgcggataga ccggtccgtt cgacatctgg
      841 acaacgacct ttgaattctt gatcgccgcc tgaccgtcgc ggcctggagg aaatatgcga
      901 acgaattcac gctggctgac cgggaacgtg acgtacatcg gatccgagct gacgatcgtc
      961 gtaaggacgc cggaatccgg accgaccacg tttccgcgcg tgacggcggt gcgcccgatg
     1021 cgtccgtcga tgggcgagtt gatgtcggta taagcgaggt tgatctcggc tgtcttcaag
     1081 gcggcttccg ccgcggcaac atctccctgc gtggcttttt cggcggcgac acggtcgtct
     1141 cgagtggcca cggatcccgc gctcgaacgc aggagatctt cggctcggtg gcgctggatc
     1201 gtggcgttgt cgctctgcgc ctgcgcgcgc agcagcgtag ctttggcctg ttcaaccgcc
     1261 gcttcgaacg gacccttttc gatgcgatac aggggcgcgc cggttttcac gcggtccccg
     1321 tcctgaaata gtgcttcttc gaggaagccc gtcacacgcg cgcgaacgtc aacgcgttcg
     1381 atagcctgga ttcgcccgac aaagcggaca gattcagtga ccgggcgctt ctccgcagtg
     1441 attacagtaa cagtcggggc cgccggctgc tgtgcttgcg cagcaactac aaaggatagg
     1501 ccaagtgcga agctggctac gatggctcgc attgaagcga tactacttct gaccccaact
     1561 cagtgagatg ccgatgtcgc ctggttttcc tccggaccaa tccacgatct ggaattttag
     1621 gcggtaccct tttggctgca aaaattgctt ccaaaactca aacagttcct tcggcaatcc
     1681 ggttagtgtt ttctcccagc ctgcctcttg ctgattgatg gcgcggccat ggtccgtgaa
     1741 cagagaattt ggaaaacgac cgacttctat ttcggttaag ccgttattga ctgctctatt
     1801 tatgatcgct gctgctcgtt ttagccgctc ctcatcggat acgcccgacg gtcccttcaa
     1861 tttgtcaagc aaggcctttt tttcggcatc cgcggcagcc tgcttgcgca tgtattcgga
     1921 ggcctttgca gct
//
LOCUS       DATDHO010000580         1600 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_176862, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000580 DATDHO010000000
VERSION     DATDHO010000580.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1600
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_176862"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..>1600
                     /locus_tag="VIY07_11100"
     CDS             77..>1600
                     /locus_tag="VIY07_11100"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY6382336.1"
                     /translation="MIRRVTKVTLIFSLGLAAWVASIGLLDFAPELLLYAQTAKPSAT
                     AWKFRLEEARIEDIHRAIKSGQITCGRLVQAYINRIRAYDGTCVAPADPNDGNDPKNH
                     FPDVAKYTGTPLQPGVMQATISDPAKLQTYGYIRGVKNAGQLRSLSTVNIRGERCATC
                     KGSCDLHPSKGPLPSGCDRACEAFRAQPDGLERAQELDRQFGTNPNLTAMPLYCTPFS
                     IKDIFDTKDMRSTGGADVAYGMDAAPADSTIVAQLRAKGAIILAKANLSEYNGATGDP
                     GGAAKATAAVLGAGNSRSTWAGNPCNPYDTERAAAQAASSSGSGVSVSANLVTCSICE
                     ETGGSCRVPAAYNGVANLTTGKAIMPFGGGIGADPFIDRAGIHCRWVKDTAIVLDALK
                     DPKRGYYDPRDIYTALPKGLISQKPYASFAGEKSLAGMRIGIVREFMVKHTPNDAAIS
                     DQIDKEIKAILRDKLGAQLLESVDPLYPDDPTIPNLKPTFQEALAEILPFHMPEYLFK
                     "
BASE COUNT          355 a          490 c          459 g          296 t
ORIGIN      
        1 tgtttcagaa aactcctatc tcactgacag caaaacatga tagaaggggt gccaagcgac
       61 attccaggag gcacacatga tcagacgagt gacgaaagtc acactaatct tttcactcgg
      121 tttagcggca tgggtcgcgt caataggcct gttggatttt gcgcccgagt tgttgcttta
      181 tgcgcagacc gcaaagccat cggccacggc atggaagttt cgactcgaag aggcaaggat
      241 cgaagatatc caccgtgcga tcaagtccgg gcaaatcacc tgtgggaggt tggtacaagc
      301 ctacatcaac agaatccgcg cttacgacgg cacttgcgtt gcgccagcag accctaatga
      361 cggcaacgat ccgaagaacc atttccccga cgtcgccaag tacacgggaa ctccgctgca
      421 acccggcgtg atgcaggcga cgatttccga tccggcgaag ctacagacct acggctatat
      481 ccgcggagta aaaaacgccg ggcagctgcg ctcgctcagc accgtcaaca tccgcggcga
      541 gcgctgcgca acctgcaagg gcagttgcga tcttcatccg tcgaaaggcc cgctgccgag
      601 cggctgcgat cgggcctgcg aggcgtttcg cgcccagccc gatgggctgg aacgggcgca
      661 ggagcttgac cgccagttcg gcaccaatcc gaatctgact gcaatgccgc tttactgcac
      721 gccgttttcg attaaagaca tcttcgatac caaggatatg cgctccacgg gtggagcgga
      781 cgtcgcgtac ggcatggacg cagctccggc ggactccacc atcgtggcgc agctgcgcgc
      841 caaaggcgcg atcattctgg ccaaggccaa cttgagcgaa tacaacggcg ccaccggcga
      901 cccgggcgga gcggctaaag ccactgccgc ggtgctcggt gctggtaatt cacgcagcac
      961 gtgggcaggc aatccttgca atccatacga cacggagcgc gccgccgctc aagcggcatc
     1021 gagctcgggt tcgggtgtgt cggtgtcggc caatctcgtc acctgctcga tctgcgaaga
     1081 gactggcggc tcgtgccgcg ttcctgccgc ctacaatggc gtcgccaact tgacgacggg
     1141 caaggccatc atgccgttcg gcggcggcat cggcgccgac ccctttatcg atcgcgccgg
     1201 gattcactgc cgctgggtga aagacaccgc catcgtgctc gatgccttga aggaccccaa
     1261 gcgcggctac tacgacccgc gagatattta taccgctctg ccgaagggat tgatctcgca
     1321 aaagccgtat gccagttttg ccggagaaaa aagtttggcg ggcatgcgca tcggcatcgt
     1381 gcgcgagttc atggtcaagc acacgcccaa cgacgcggcc atcagcgatc agatcgacaa
     1441 ggagatcaag gccattctac gcgacaagtt gggcgcgcaa ctgcttgagt ccgtcgatcc
     1501 cctctatccc gacgatccga cgattcccaa cctgaagccg acatttcaag aagccctcgc
     1561 ggaaattttg ccgtttcata tgcccgagta tcttttcaag
//
LOCUS       DATDHO010000581         5113 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_424637, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000581 DATDHO010000000
VERSION     DATDHO010000581.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5113)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5113)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5113
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424637"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VIY07_11105"
     CDS             complement(<1..357)
                     /locus_tag="VIY07_11105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017270196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6382337.1"
                     /translation="MSQAAEKRGGMPAILKDAAFVWEDPLDLEGELSEDERMVRNSTR
                     GFAQSYLMPRVVEAYRDEKYDPGLLPEMGKLGLLGPTIPDEYGGAGLGYVAYGLITRE
                     LERVDSGYRSSMSVQSS"
     gene            complement(480..791)
                     /locus_tag="VIY07_11110"
     CDS             complement(480..791)
                     /locus_tag="VIY07_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEY6382338.1"
                     /translation="MAEAASPKPKAGKPVTTRHLAAALAEQHQLTKKQGLEMLEDLIG
                     LITKHLKKGERVKIAGLGILIVRKRAARMGRNPMTGEAIKIKASKKVAFRAAKDLKMA
                     I"
     gene            979..1055
                     /locus_tag="VIY07_11115"
     tRNA            979..1055
                     /locus_tag="VIY07_11115"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1013..1015,aa:Arg,seq:ccg)
     gene            complement(1146..1637)
                     /locus_tag="VIY07_11120"
     CDS             complement(1146..1637)
                     /locus_tag="VIY07_11120"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6382339.1"
                     /translation="MANKQIEKMLQGLNILVVDDNAYMRRLTRTMLTNLGGRSVLEAS
                     DGLAALESIRTADPDVMLLDWDMPVLNGIEVLRIVRSPGVFPRPNLPVIMLTARAQRA
                     QVNEALRAGANEFLLKPTSPKALCDRLISIVFKPRPMVTLGTYYVPQPRRMSAPREAA
                     LRE"
     gene            1815..2174
                     /locus_tag="VIY07_11125"
     CDS             1815..2174
                     /locus_tag="VIY07_11125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014527154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF427 domain-containing protein"
                     /protein_id="HEY6382340.1"
                     /translation="MKLPGPDHPITVTSHGKHVRVAFVGRVVADTTRALVLKEAGYKP
                     VLYIPRADADMSLLNRTSHSTHCPYKGDASYFSIVADGRTAENAVWSYESPFPAMAEI
                     KEHLAFFPSRVDAIEET"
     gene            complement(2185..3156)
                     /locus_tag="VIY07_11130"
     CDS             complement(2185..3156)
                     /locus_tag="VIY07_11130"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HEY6382341.1"
                     /translation="MASLIEWRVPAAVQPRVEDYGYDLERALSSVVGLHSIIPADAFT
                     ADTLGVERAGNGVLIDDGLVLTIGYLITEADTVWLHLGDGGVVQGHALGFDQETGFGL
                     VQALGSIDLPSLEIGSSKAAEVGERVVVGGAGGRTRSLAGRIAAKQEFAGYWEYVLDE
                     AIFTYPAHPNWGGTALISSEGKLIGIGSLQLERAREGKNEHLNMIVPIDLLDPVLQDL
                     RKFGRANRPVRPWLGLYSTEIEDKIVVVGIAPKGPAARAEIKTGDVVVAVKGDRVSTL
                     AGFYRKVWALGRAGVEVPLTLYREGVTFDVRVNSSDRAKFLKGPRLH"
     gene            3245..4243
                     /locus_tag="VIY07_11135"
     CDS             3245..4243
                     /locus_tag="VIY07_11135"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY6382342.1"
                     /translation="MIPLSILDLSPVSAGSTAAQALRNSLDLARFADGLGFTRYWVAE
                     HHNLPAIASSAPDIMIGQIAAATRNMRIGSGGVMLPNHAPLMVAERFKVLEALYPGRI
                     DLGLGRAPGTDPATSYALRRRQGISEEDDFLDRFNELMLLETRGFPAGHPFHNVQAMP
                     SDVPLPPIYLLGSSDYSAQLAGHIGAAFSFAHHFANFDAVEAMRLYRDNFKPSQSHHT
                     PYAILATHVVCADTDQEAERLAATVDLNFVRRAKGEYFPLASPEDAAKYDYTPVDRAR
                     IAQNRQRVSVGSPATVKAGLMPLIEATKADELMVTTMLFDHAARKRSYELLAKVFA"
     gene            4513..>5113
                     /locus_tag="VIY07_11140"
     CDS             4513..>5113
                     /locus_tag="VIY07_11140"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HEY6382343.1"
                     /translation="MGKQFTLTTTDQHSLGAYRADPAGTPKGGIVVIQEIFGVNRHIR
                     AMCDRFASIGYAAVAPAVFDRFVRNFDSGYTPDEIAHARSYLGNLNWDHMMHDIAAAV
                     ESLKGSGPVGIVGYCMGGSAAFLAACRVPGLAASVCYYGGVIGKFADEKPKCPVQMHF
                     GDKDESIPMDVVEAIKKKQPQAEIYVYPDAPHAFSNDDRP"
BASE COUNT         1021 a         1611 c         1475 g         1006 t
ORIGIN      
        1 cgaagactgc accgacatcg aggagcggta tccggaatcg acgcgctcaa gctcgcgcgt
       61 gataaggccg taagcgacat aaccgagccc ggcaccgcca tactcgtcgg gtatggtggg
      121 tccaagcagg ccaagcttcc ccatctcggg cagcaaaccg gggtcgtatt tctcgtcgcg
      181 gtatgcctcg accacccgcg gcatgagata gctttgcgcg aagccgcggg tgctgttgcg
      241 caccatgcgc tcgtcttcgg aaagctcgcc ttcgagatcg agcggatctt cccacacgaa
      301 ggccgcatcc ttcagtatcg ccggcatgcc accgcgcttc tcggccgctt gtgacattgg
      361 agtcctcctg gcttttgagg tgccattata gaggactttt caaacaattc cctccctagc
      421 gcggacaaaa caaaaccccg ccgtcgcacg gcggggtctt gcaagtcgag agcgcgcgct
      481 cagatcgcca tcttgagatc ttttgccgcg cggaaagcaa ctttcttgct ggctttgatc
      541 ttgatggctt cgcccgtcat cgggttgcgg cccatgcggg cggcacgttt gcgcacgatc
      601 agaataccta gacctgcaat cttcacccgc tcgccctttt tcaggtgctt ggtgatcagg
      661 ccgatcaggt cctccaacat ttcgaggccc tgctttttgg tgagctgatg ctgttccgcg
      721 agcgcggcgg ccaggtgcct ggtggtgacc ggcttgccgg ctttcggctt gggtgaagcg
      781 gcttctgcca tttgagaatg ctccttgagg gcgcaccatg cgcgagcctt tagagcagta
      841 agagattcgc gccggggcgc atagctaggg gctgcaaaag ccgcgggctt aaccacagaa
      901 agctcgaaaa aagccccgca gaccgtgaat tcggcgccgt tgccggtcgc ggacgtttcg
      961 tctattgagg gcttacgcgc gcccgtagct cagctggata gagcgttgcc ctccgaaggc
     1021 aaaggtcgga cgttcgaatc gtctcgggcg cgccattatt gcccgatcgg cggacccagc
     1081 ccgactcaag tccgacccaa gcccgaccca agtccgatcc aagccgggcc aagcatgaca
     1141 ctactctatt cccgcagcgc cgcctcgcgc ggcgccgaca tgcgtcgcgg ctgcggcaca
     1201 tagtacgtgc caagcgtcac catcgggcgc ggcttgaaca cgatcgagat caatcggtca
     1261 cagagcgctt tgggcgatgt cggcttgagc agaaactcgt tggcgccggc gcgcagggct
     1321 tcattcactt gggcgcgttg tgcccgggcc gtcagcatga tgaccggaag gttcgggcgc
     1381 ggaaacactc cgggggagcg aacgatacgc aacacctcga tgccgttgag gaccggcatg
     1441 tcccagtcca gcagcattac gtcgggatcc gcggtgcgaa tcgattccag cgcggcgagg
     1501 ccgtcggaag cctcaagcac ggacctgccg ccgaggttgg tcagcatggt gcgcgtgagg
     1561 cgccgcatgt acgcattgtc atcaacgacc aggatgttca gaccctggag catcttttcg
     1621 atttgcttgt tggccatgaa accccggatc gtcgccagaa ttggccgcaa tttacgccgg
     1681 agcttctgtt gtttcgttga aaacgatcgt tcaaattttc gcaatctgcc gtgtcgctgc
     1741 caaaatgcag cacctaaatc gggaccgcgc gcaaccaggt ttacagggca tttacctata
     1801 tgcgggagag cgcgatgaaa cttcccggtc cggaccatcc aatcaccgtc acgtcacatg
     1861 gcaagcacgt gcgcgttgcc ttcgtaggcc gcgtggtcgc cgacacgacg cgggcactcg
     1921 tgctaaagga ggcaggctac aagccggtcc tctatattcc acgcgcggat gcagacatga
     1981 gtctgctcaa ccgtaccagc cattccacgc attgccccta taagggtgat gcgagctatt
     2041 tcagcattgt tgccgatggc cgcaccgccg agaacgcggt ctggagctac gagagccctt
     2101 tcccggcaat ggccgagatc aaggagcatc tcgcgttttt tcccagccgg gttgatgcga
     2161 tcgaagaaac ctgagcgagt ctgttcagtg cagccgcgga cccttgagga attttgcgcg
     2221 gtcagacgag ttcacacgca cgtcgaatgt gacgccttcg cgataaagcg taagcggcac
     2281 ttcgacgccg gcgcgtccga gcgcccaaac cttgcggtaa aagccggcga gtgtcgatac
     2341 gcggtcaccc ttgaccgcaa caacgacgtc acccgtcttg atttcggcgc gcgcagccgg
     2401 ccctttaggc gcaatgccga ccacaacgat cttgtcctcg atctcggttg aataaagacc
     2461 gagccagggt cgcaccggcc gattggctcg gccaaatttg cgcaggtcct gcagaaccgg
     2521 atccagcaga tcgatcggca cgatcatgtt gaggtgctcg ttcttgcctt cgcgcgcgcg
     2581 ttcaagctga agcgaaccga taccgatcag cttgccctcg ctcgaaatca gtgccgtgcc
     2641 gccccagttt ggatgcgcag ggtaggtgaa tatcgcctcg tccagaacgt actcccaata
     2701 acccgcgaat tcctgtttcg ccgcgatacg accggcgagt gagcgcgtgc gcccgcctgc
     2761 gccgccgacg acgacgcgtt cgccgacttc agcagccttg gaagaaccga tttcaagcga
     2821 agggagatca atgctgccaa gcgcctgcac caggccgaaa cccgtttcct gatcgaaacc
     2881 gagcgcatgt ccttgcacaa cgcccccgtc gccaagatgc agccacacgg tgtcggcttc
     2941 ggtgatcaga tagccgatag tgagcacgag gccgtcgtcg atcagcacac cattgcctgc
     3001 gcgctcgacc ccaagcgtat cggcagtaaa agcatcggcg gggataatcg aatgaagacc
     3061 gaccaccgag gagagagcgc gctcaagatc gtagccatag tcctccacgc gtggctgaac
     3121 cgccgccggc actctccatt cgatcaacga ggccatcgat gcgctcccaa tcggtcccgt
     3181 ttatcatacg ccggatcatg cgggcgaaaa gacggcgctc acatgttaat gtgggccttc
     3241 tccgatgatc ccgctgtcca tcctcgatct gtcgccagtt tcggccggct ccaccgcagc
     3301 gcaagccttg cgcaattccc tcgatctcgc gcggttcgcc gatggcctcg gttttacgcg
     3361 ttattgggtg gccgaacatc acaatttgcc tgccattgcg agctcggccc ccgacatcat
     3421 gatcggccag atcgcggcgg caacccgcaa tatgcgcatc ggttcgggcg gcgtgatgct
     3481 gccgaaccac gcgcctttga tggtggccga gcgcttcaag gtccttgagg cgctttatcc
     3541 aggccgcatc gatctcggtt tgggccgcgc gccgggcacc gatccggcaa cgtcatatgc
     3601 gcttcgacgg cgacagggca tcagcgagga agacgatttt ctggatcggt tcaatgaact
     3661 gatgctgctc gaaacgcgcg gctttcccgc tggtcatccc ttccacaatg tgcaagcgat
     3721 gccatcggat gtcccacttc cgccgatcta tctgctgggt tcttcggatt acagcgcgca
     3781 gcttgccgga catatcggcg cggccttttc gttcgcgcac cactttgcca atttcgatgc
     3841 ggtggaagcg atgcggctct atcgcgacaa tttcaagcca tcgcaatcgc atcacacgcc
     3901 ttacgcgatc ctggcaaccc atgtggtatg tgccgacaca gaccaggaag ccgaacgact
     3961 ggccgcgacc gtcgatctca atttcgtgcg tcgcgccaag ggcgaatatt ttccactcgc
     4021 ttcaccggaa gatgctgcga aatacgacta cacgccggtt gaccgcgcgc gcatcgcaca
     4081 gaaccgacaa agggtatcgg tcggctctcc tgcgacggta aaagccgggc tcatgccttt
     4141 gattgaagcc accaaggccg acgagctgat ggtgaccacc atgctgttcg atcatgcagc
     4201 tcgcaaacgc tcgtatgaac tgctggcgaa ggtttttgcc tgatccgccc gtcatggccg
     4261 gcactcgggc ccctccttcg gccgcccgag cacaagcctt atgctgggca ccgcctccca
     4321 ccgtcatgcc cgcgcatagc cgtccgaagg acggcgtgct ttcgcacgcc tatgtcgcgg
     4381 gcatccacgt cttcccttca gcattcaaca acaaagacgt ggatggccgg gacaagcccg
     4441 accatgacgc gtcaaatcgg ccatgctaaa agccgaccga ttttcccgcg taaaaaatca
     4501 tgggaggtac cgttgggtaa gcagttcacc ttgaccacca ccgatcagca ttctctcggg
     4561 gcataccgcg ccgatcccgc cggaacaccc aagggcggca tcgtggtgat ccaggagata
     4621 ttcggcgtca accgccacat ccgcgcaatg tgcgatcgct tcgcgtcgat cggctacgct
     4681 gccgttgcgc cggccgtgtt cgatcgcttc gtgcgcaatt tcgatagcgg ctacacgccg
     4741 gacgagatcg cgcacgcgcg cagttatctc ggaaatctca actgggatca catgatgcat
     4801 gacatcgcgg cagcagttga gagcctgaaa ggcagcggcc ccgtcggcat cgtcggctac
     4861 tgcatgggcg ggagcgccgc cttcctcgcc gcctgccgcg tgccggggct tgcggcctct
     4921 gtgtgctact acggcggcgt tatcggaaaa ttcgccgacg aaaaaccgaa atgccccgtt
     4981 caaatgcatt tcggcgataa agatgaaagc attccgatgg acgtggtgga ggcgatcaag
     5041 aagaagcagc cgcaggccga gatctatgtc tacccggatg cgccgcacgc tttttcaaac
     5101 gacgaccgcc cga
//
LOCUS       DATDHO010000582         7271 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_374809, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000582 DATDHO010000000
VERSION     DATDHO010000582.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7271
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_374809"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            117..1535
                     /locus_tag="VIY07_11145"
     CDS             117..1535
                     /locus_tag="VIY07_11145"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HEY6382344.1"
                     /translation="MLLRHNSFRPPAPVPYPNTPGPLDLVRTLWSNPIEAWTKAHFEE
                     PIVRTSLPFGDVVVVNDPAAVRRVLQENETNYCKDRFQKRILAVLSGGLLTAESAQWY
                     SQRRLIAPLFRSSMIKDMAPTMMAAIDELVGRWAKRDGVVLDIAEETTDLALDVLERA
                     IFSAGLFVGRDDLRAAMRTYFDGLGRIDPFDLFDLPDFIPRISRLSTRPAIRVFHKAV
                     EDMIAARERDLERHETGAANDVLMLLIRARDPATGGKLTRQEIRANVITFMAAGHEST
                     ANAITWTLYLLSRSPEWRECVRAEAERAGGETPELLFDRLSKTRAVVEESLRLYPPLA
                     AISRMARSSDELAGMRVEAGAIVAIAPYVLHRHKMWGTRPDEFDPARFLPGSRDYIDR
                     YAYLPFGAGARGCIGSIFALQEATLAVAAITRNFELEAEPNHVVWPVHRITLRPRGGL
                     PMFVRRRTPGRPALKSEEAASV"
     gene            complement(1538..2182)
                     /locus_tag="VIY07_11150"
     CDS             complement(1538..2182)
                     /locus_tag="VIY07_11150"
                     /inference="COORDINATES: protein motif:HMM:TIGR04025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MSMEG_1061 family FMN-dependent PPOX-type
                     flavoprotein"
                     /protein_id="HEY6382345.1"
                     /translation="MTSVAALEALYDAPPWAAIAKETDTLIAPYRAFIELAPYLTLAT
                     VGADGVDCSPRGDAPGFVRILDEKTLLIPNRNGNNRIESLRNIVRDPRVAIHFLIPGC
                     AESLRLKGRAAISADPALTASLAIDGKSPRTVIIVTVESVYYHCAKAIHRSRLWDAST
                     HVDRSSLPSTNAILAAIQWRRCRNAAMQIGRRRADPAPLLDPRADEAGPAPIAQ"
     gene            2704..2886
                     /locus_tag="VIY07_11155"
     CDS             2704..2886
                     /locus_tag="VIY07_11155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382346.1"
                     /translation="MTVKAKHKHHQAENGRGDREQRRRDMALDEALKDTFPASDPVSV
                     EQPVDGIRIEEEIERR"
     gene            complement(2957..3958)
                     /locus_tag="VIY07_11160"
     CDS             complement(2957..3958)
                     /locus_tag="VIY07_11160"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6382347.1"
                     /translation="MLIGFIFLTGSIAIAKPLDVQAVNEAQWEAPPAKSRAFTTRAQI
                     LLARSNFSPGEIDGNPGENLDKAIAAFAARQGAATNKLTQELWQKLTSTSDQPALVDY
                     TISDEDLRGPFAEKIPAKMEDMKDLPGLPYRNTKEKISEKFHMSPDLLATLNPGQKFD
                     TAGARIVVANVSISNLPKKVTRMEVDKSEQALRAFAADGNLLAYYPATVGSQEKPAPS
                     GTLKVTVVRKNPTYRYNPDYAFKGVRSKKPFTIKPGPNNPVGLAWIGLSGEGYGVHGT
                     PEPSKISKAESHGCVRLTNWDALQLASAVSKGTPVEFIGEQRSPAASKHRRQQRAGR"
     gene            4246..4506
                     /locus_tag="VIY07_11165"
     CDS             4246..4506
                     /locus_tag="VIY07_11165"
                     /inference="COORDINATES: protein motif:HMM:NF023494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3551 domain-containing protein"
                     /protein_id="HEY6382348.1"
                     /translation="MLRIILAGAVAFAALVLSLQPAGASEAPWCAVTSGGDGDMHWDC
                     HYRSIEECLPNVLAGNRGWCNPSPYFVPPARHPNSRRPMRPQ"
     gene            5090..5449
                     /locus_tag="VIY07_11170"
     CDS             5090..5449
                     /locus_tag="VIY07_11170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPW repeat protein"
                     /protein_id="HEY6382349.1"
                     /translation="MNEWTNAKLCDVANLILGVILLASPWIFGFPSGAPSQNAVICGI
                     VIAAISLAALAAFTVWEEWLNLIVGVWVLVSPWVLGFAGTTAMHVHIVVGVIVAVLAA
                     LEIWLLYQRPPRHTAAN"
     gene            5566..6657
                     /locus_tag="VIY07_11175"
     CDS             5566..6657
                     /locus_tag="VIY07_11175"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY6382350.1"
                     /translation="MILYDACRATFGMTDVLRRAQGQTFEALGLGPKECSYDVVASGA
                     FWRHRDYGRSSAQSVLIVAAPIKRAYIWDLVPSSSAIRYILHQGFHVHLLEWLPAETA
                     DEYGLAEYSESISECVARISSRRAGAKTFLMGHSLGGTLAAIFAASESDSIRGLVLLS
                     TPLCFKPESSRFRDALVSLIPAGLLDAAPCPGSLLSHMSALASPETFIWSRMADAMAS
                     VADIHAREIHGRVERWALDETALPGELVRQLIEWLYRENRFCEGNLKIATNPIGPATL
                     TAPTLAVVNVADDVAPGVSVKPFIDAMPTRDVRILEVPGERGVCLQHLGILIGRDARA
                     AVWPKIISWMGSHADPSRSRSASSQRARR"
BASE COUNT         1466 a         2067 c         2104 g         1634 t
ORIGIN      
        1 aacaacgatc gagcacattc agttccgccc aaagcgtttg gcacacttgc ctcggaacct
       61 aaatagacat gatcgctttt tgaatcgagc acaattcgac aaaaagcgta gaagcgatgt
      121 tgttgcgaca caattcattt cgtccacccg ctccggtgcc gtatccaaat acgcccggtc
      181 cgctcgatct ggtcaggacg ctatggagta atccaataga ggcttggaca aaggctcatt
      241 ttgaagaacc gattgtgcgg accagccttc cattcggtga cgtcgtcgtt gtgaacgatc
      301 ctgccgcggt ccgtcgggtc ctccaggaga atgagacaaa ctattgcaag gatcgttttc
      361 aaaagcggat cctcgccgtt ctcagcggtg gcctgctgac ggcggaaagc gcgcagtggt
      421 attcgcaacg gaggctgatc gcaccgcttt ttcgatcgag catgatcaag gacatggcgc
      481 cgacgatgat ggccgcgatc gatgagctgg tcgggcgctg ggccaagcgt gacggtgtcg
      541 tgctcgacat tgcggaagag accaccgatc ttgcgctcga tgtgctcgag cgcgccattt
      601 tttccgccgg cctgttcgtt ggcagagacg atttgcgggc ggcaatgcgc acctacttcg
      661 atggtcttgg gcgaatcgat cccttcgatc ttttcgacct tcccgatttt attccacgca
      721 tcagccgcct ctccacgcgc cccgctattc gggtgtttca caaggcggtg gaggacatga
      781 ttgcggcacg ggaacgcgat ctcgagaggc acgaaaccgg tgcggcaaac gatgtcctga
      841 tgctgctcat ccgcgcacgt gaccccgcca ccggcggcaa gctcacgcgg caggaaattc
      901 gtgcaaacgt tattaccttt atggccgcag gccatgaatc cacggccaat gccatcacct
      961 ggacactgta tttgctgtcg cgttctcccg aatggcgtga atgtgtgcga gccgaagcag
     1021 aacgggcggg tggcgaaacg cctgaactgc ttttcgatcg gttgagcaag actcgtgccg
     1081 tcgtcgagga atctctccgt ctctatcctc cactcgcggc catcagccgg atggcgcgaa
     1141 gcagcgatga gctggcgggc atgcgtgtgg aagcaggcgc gatagtcgcg atcgcgccct
     1201 atgtattgca tcggcacaaa atgtggggaa cgcggcccga cgaattcgat ccggcacgat
     1261 ttctgccggg ctcacgcgac tacatcgatc gatatgcgta cctgccgttc ggtgcgggcg
     1321 cgcggggctg catcggctcc atttttgccc ttcaggaggc aacgctcgcg gtggccgcca
     1381 ttacgcggaa tttcgaactc gaagcggaac cgaatcacgt cgtctggcct gtccaccgca
     1441 taacgctaag gccgcgcggc ggtttgccca tgtttgttcg gcgccgaact ccgggccggc
     1501 cggcgctcaa gtcagaggag gctgcctccg tctgacctta ttgcgctatc ggggcaggcc
     1561 cggcttcatc ggcccttggg tcgagcagcg gtgcaggatc ggcccgccgc cgtcctatct
     1621 gcatggcggc gttgcggcaa cgccgccatt ggatagcggc aaggatcgcg ttcgtgcttg
     1681 gcaggctgct gcgatcaacg tgcgtcgacg cgtcccacag cctggagcgg tgaatggcct
     1741 tcgcacagtg gtagtagacg ctctcgacag tgacaatgat aaccgtccgc ggactttttc
     1801 cgtcgatcgc gaggctcgcc gtcaaggccg gatcggcgga tatcgctgcg cggcccttga
     1861 ggcgcaaact ctcggcgcag ccgggaatca ggaagtggat cgcaacgcgg ggatcccgaa
     1921 cgatgttacg caggctttcg attcgattgt tgccatttcg gttggggatc aaaagcgtct
     1981 tctcgtccaa aatccgcacg aagcccggag cgtccccacg aggcgaacag tcgacgccgt
     2041 cagccccgac cgtcgcaagg gtcaggtacg gcgccaattc tataaaggcc cggtaagggg
     2101 cgatcagcgt gtctgtctct tttgcaatcg cagcccaggg cggagcatcg taaagcgctt
     2161 ccagtgcagc aacgctggtc accagatttt ccgttatcga catccttccc cctttaggtc
     2221 tgggaccaac cggcggtacc acggccgact cgaacacctt tgcacagatc ggcgtccata
     2281 gtgtggcagt accggcgcgg aactcaaaac ggcgcgattt gcggaactag ccggtgccat
     2341 cggggtttcg agttacataa atctcattcg ggaggcggca atgccaatat gcgaaacatg
     2401 cggcaatgac tacgacaaag cgtttcaagt cactctaaac ggcaagaatc acatctttga
     2461 cagcttcgaa tgcgccatac aggcccttgc cccgacttgc gcccattgcg gtacgcacgt
     2521 tgttggtcat ggcgtcgaaa aagacgatac tatctattgt tgcgcccatt gtgccaaaca
     2581 ggagggtgtc acgcaggtgc gcgatcgcgc ctgatcaatc acctttcatt ggtcagtaaa
     2641 acgagaccat gaccgccgtt tcgccatggt tttgcgcgaa acgattgtcg ggtgacaatc
     2701 cagatgactg tcaaagctaa acacaaacac catcaagccg aaaacggtcg cggtgaccgc
     2761 gagcaacgac gccgtgacat ggcgctcgac gaggcgctga aggatacttt ccctgcgtcg
     2821 gatcctgttt cggtcgagca gccagtggac ggcatcagga ttgaggaaga aatcgagcgc
     2881 cgatgaatga tcagcatcac gactgcacaa ccggacgggc ggcagtgggt tagatcgtat
     2941 tcggccctct ttgcgctcag cggccggcgc gctgctggcg gcgatgtttc gaagccgctg
     3001 gcgacctttg ctcgccgata aactcgactg gagttccttt cgacacggcg gacgcgagct
     3061 gcaaggcgtc ccaattcgtc aatcggacgc agccatgcga ttcggctttg ctgattttcg
     3121 atggctcggg agtgccgtgg accccataac cttcgcccga tagaccgatc caggccaagc
     3181 ctaccggatt gttggggccc ggtttgattg taaatggctt tttgcttcga acgcccttga
     3241 acgcgtagtc gggattataa cgataggtgg ggtttttcct caccacggtg actttcagcg
     3301 tgccgcttgg cgcaggcttc tcctggctgc cgaccgtggc cgggtagtaa gccagcaaat
     3361 tgccgtcggc agcgaaggct cgcagtgcct gctcgctctt gtcgacttcc attcgggtga
     3421 cttttttcgg caagttagag atcgaaacat ttgcaacgac aattctggcc ccggcagtgt
     3481 cgaacttttg ccccggattc aatgtcgcaa gcagatcggg gctcatgtgg aatttttccg
     3541 agatcttctc tttcgtattc cgatacggaa gtcccggaag atccttcatg tcttccatct
     3601 ttgcaggaat tttctctgcg aagggaccgc gcaaatcctc gtctgaaatc gtgtaatcga
     3661 ccagcgcggg ctggtctgac gtcgaagtca gtttctgcca gagctcctga gtgagcttgt
     3721 tcgtcgcggc gccctgcctt gcggcgaagg cagcgattgc cttgtcgaga ttctcgcccg
     3781 gatttccatc gatctccccg ggcgaaaaat tcgatcgagc caacagaatt tgagccctgg
     3841 ttgtgaacgc acggctcttt gcgggcggtg cctcccattg ggcctcatta accgcctgga
     3901 catcgagggg cttggctatc gcaatcgaac ccgtcaggaa aataaaacca atcaacatgc
     3961 caaaatggca tatggaatga tgtgagcccg cagccctgca cgatcatggc cgtcaacctt
     4021 cggccatagg gtttggttcc tgacactggc gacgctggaa agtgacaaga gggtgcggtt
     4081 tgcacgcctt gcagcgtctg ctgcgcatgc cacggcttgc gttaaaggct gggcggcagc
     4141 cgtagcgcga taccaatcgc aagttttgtg accctgatca catgcgacaa gcaggcttgg
     4201 ggtctacttt attcataggg cactccaaaa cgggaggcac cgaaaatgct gcgcataatt
     4261 ttggctggtg ccgtcgcttt tgctgctctg gtcctcagcc tgcagccggc tggagcctcc
     4321 gaggcgccct ggtgcgccgt aacgtcggga ggcgatggcg acatgcactg ggattgccac
     4381 tatcgctcga tcgaagaatg cctgccgaac gtgctcgcgg gcaatcgtgg ctggtgcaat
     4441 ccgagcccat acttcgtccc tcccgcaaga catccgaatt cccgccgtcc catgcgtccg
     4501 caataaggtg agcaaatgaa cagaaaactc attggtctca tcgggatttt ggcctgcgtg
     4561 atcgggctgc tgaccgtagc gccgtttctt tcagcgaatg cggcggaacc gccctcggag
     4621 cggtgcctcg ccgtgaccaa gcaagagtat gacagcgcca atagacatat gctgttacgg
     4681 acccggttca cggcatacga gagaacgggt cagttggcgt ggcggcatta ctggttttgc
     4741 cgctcataac gatcgctgag gtgcgctgaa tcagacgtgg acgaaaaacg gacccgcgac
     4801 atgtcccggg ttcgggcccg gccaatgcgg ctccggcggc gcccgattca atccctggaa
     4861 ccaattccac ccttgtgcgt tacaggccac cgagccgtcc gcccgctgct ttagcgcgga
     4921 gcccagggct atgtggacca cgcttttcac gattcgcttc tgatcgtcgc cgccttcttt
     4981 ggacctgcgg cgttgtcctc aatttgccca gcggcgcact gaagacatcc agtgatgctg
     5041 cggtcggcgc gctcaacgct ggaggcggtc gagtacaaag gaggacgtca tgaatgaatg
     5101 gaccaatgcc aaactttgcg acgtcgccaa tctgatcctt ggagtaatcc ttttggcgtc
     5161 gccttggatc ttcggctttc cgagcggcgc gccgtcgcag aatgccgtta tctgcgggat
     5221 tgtcattgcg gcgatatctt tggccgcatt ggccgcgttt accgtctggg aggaatggct
     5281 caatctaatc gtgggcgtct gggtcttggt ttcgccctgg gtgctcggtt ttgcggggac
     5341 gaccgcgatg catgtccaca tcgtcgttgg cgtcatcgtt gccgttcttg ccgcgctcga
     5401 aatctggctt ctttatcagc gcccgccacg acacactgcg gccaactgat tatgaaggac
     5461 ggaaccacaa gctcggccgt ggcgccgcgt tctattagcg gacgccacgg gccgcagctc
     5521 atatgccgcg agtgccggct aacgtgcgag ccaaaaggct ttcggatgat cctgtatgac
     5581 gcgtgccgcg ccacgttcgg tatgaccgac gtgctgcggc gcgcacaggg gcagacgttc
     5641 gaagcgcttg gattgggtcc caaggaatgt tcctatgacg tcgtcgcctc tggtgcattt
     5701 tggcgccatc gcgattacgg cagatcctcc gcacaatctg tgcttatcgt cgcggctccc
     5761 atcaaacgcg catacatctg ggatctcgtc ccatcatcga gcgctattcg ttatattttg
     5821 catcagggct tccatgtcca tcttttggaa tggctcccgg ccgagacagc cgacgagtac
     5881 ggtttggcag aatactccga gagcatttcc gaatgcgttg caaggatttc aagcaggcgt
     5941 gcaggcgcga agacgtttct gatgggtcat tcgctgggcg gcacgctcgc ggcaatattt
     6001 gcagcttcag aatcggattc catacgtggt ttggtgctgc tcagtacacc gttgtgcttc
     6061 aaacctgaga gcagtcgttt ccgggacgca ttagtttcac tcattccggc aggcttgctt
     6121 gacgctgcgc catgtccagg gtcgcttctc tcgcacatga gtgccttggc gtctcccgaa
     6181 acatttattt ggtcgaggat ggcagatgca atggccagcg tcgcggatat tcatgcacgg
     6241 gaaattcatg gacgagtcga acgctgggct cttgatgaaa ctgctcttcc cggcgaattg
     6301 gtgcgccaat tgatcgagtg gctctatcgc gaaaaccgtt tttgcgaggg caatttgaaa
     6361 attgccacta atcctattgg ccctgctact ttaaccgcac ccacgcttgc cgtcgttaat
     6421 gttgccgacg atgttgcccc cggtgtttca gtcaagccgt ttatcgacgc catgccgacg
     6481 agggacgttc gcattttgga ggttccgggg gaaaggggtg tgtgcttaca gcatctaggg
     6541 attttgattg ggcgcgatgc acgggccgca gtttggccaa aaattatttc gtggatgggc
     6601 tcgcatgccg atccttcgcg ttcgcgttcc gcgagctctc aacgggcacg tcgatgaaac
     6661 cgactgatgt ccgctattgg cccttaacgg acatttgttt tgcgctgccg actccgcttt
     6721 tgggggcgaa ccggacaaat cgccgacgcg atgcgtctgc ttccgccaca gaggagatga
     6781 cacggcgcgt ataagcccag gcaggcgacg ataagtcccc taggcgtatt tcaggctagg
     6841 gtcgaccgat accttacgat cttcactgta acgttcgggc ataccgggca ttcaaaggtt
     6901 cgtctgtcat gattaggctc gtccggttca atgcaggcga gccacatctg cgatttgcat
     6961 aactcgcaaa acggacgacc aatgatccgt tgctggggaa gtgtttgatc ttttcgcatg
     7021 caacaccctt tgagtagttg gcgcggcata cacacgaatt gaaagttcca ataaaaaaga
     7081 gtcggccaat ggaccagctc gactcccatt tctacaaacc cgctgcactc aacaagaggc
     7141 caggtgctac tttatgccca ctatcaacaa ctgtacgaat cgaaacttac gttttgcatt
     7201 tcagttcgac aggaatatgg cgagagagtt ccataccgaa acggtgatgg ctgccgcaaa
     7261 ctttcaatga g
//
LOCUS       DATDHO010000583         2431 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_424722, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000583 DATDHO010000000
VERSION     DATDHO010000583.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2431
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_424722"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(190..1428)
                     /locus_tag="VIY07_11180"
     CDS             complement(190..1428)
                     /locus_tag="VIY07_11180"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY6382351.1"
                     /translation="MLSRIVTAGSHMRSLQGASLFGLLAALGAGISGCATLERLPAVT
                     YAQAKQADILDIPDARFYVAETKQILDIAVKANQRRNLARGVSATRRFLAISGGGDDG
                     AFGAGLLVGWSDRGDRPEFDMVTGVSTGALSAPFAFLGRAYDPQLKAVYTETSASDIF
                     EKRAPLLGAIAGDALTDNAPLRQMISRNLDDEVLRRIAEEYRKGRLLFILTTNLDQGR
                     PVIWNIGSIASSNHPKARELIIEVLLASTSIPVVFPPVMLDVTVSGERYQEMHVDGGT
                     IAQAFLYPPSVSFRTAALRTGVDEKILRTERRRVAYVIRNGRLTRPEESVKLQTIAIA
                     KEALSTMTTASGVNDTYRMYLLARRDGVDFNLAAIGDDFNIPYKGPFAPDYMQALFEY
                     GYQKGRAGYPWQKTPPGYVN"
     gene            1589..2323
                     /locus_tag="VIY07_11185"
     CDS             1589..2323
                     /locus_tag="VIY07_11185"
                     /inference="COORDINATES: protein motif:HMM:NF012707.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HEY6382352.1"
                     /translation="MRIDELSLESTPDHPLCRGWTLAVFRMTTCYAIVLAEGYPTFDQ
                     PTDVEMCKLQCALRGSFDLLSSISSRFSFAYAIVVFFMGVVVTQSAAAGTLDDVRSRD
                     KLICGVSEGLPGFSEKDGSGVWRGFDVDFCKAVAAAVLGDTGKVEYVPLSATIRFDAL
                     TDRRIDLLSRNSTWTMSRDLELGIEFAGVSYFDGQGFLVPTLFGASSALQLNGARICV
                     ASGTCVYRKPKPKRNDDDARQGSGVM"
BASE COUNT          510 a          694 c          689 g          538 t
ORIGIN      
        1 gcgggcgggg ggaaggcagc aacgctacgg aacgcaaacg gggtggttct gcaactgcag
       61 ggacggcaag tcggttttga ggcctccctc agtttaagcg gtatgacaat ctctctgcag
      121 taagagcggg ccctaaactc attcagatag gtattccaac cgtcatcctt accagttcgg
      181 cgacgccgcc taattgacat aaccaggcgg agtcttttgc catggatatc cggcgcgacc
      241 tttttgatat ccgtattcaa acagcgcttg catgtagtcc ggcgcaaagg gacccttgta
      301 agggatatta aagtcgtcgc ctatcgcagc aagattgaaa tcgacgccgt ctcgcctggc
      361 gagcagatac atgcgatagg tgtcattcac tccgctcgcg gtcgtcatcg tcgataacgc
      421 ctctttggcg atggcaatcg tttgcaattt gacgctttcc tccggccgcg taagccggcc
      481 attacgaata acataggcaa cacgccttct ctccgttctc agaatttttt cgtcaacgcc
      541 ggtgcgcaac gccgctgtcc tgaacgatac cgagggtgga taaagaaacg cctgcgcgat
      601 cgtgccgcca tcgacatgca tttcctggta ccgctctccg ctgacggtga cgtccagcat
      661 cacgggcgga aatacaacag ggatcgaggt ggatgccaac aggacttcaa tgatgagctc
      721 gcgagccttt ggatgattgc ttgatgcgat cgatccgata ttccagatca cagggcggcc
      781 ctggtcgagg ttcgtcgtca gaatgaacag caaacgccct tttctgtatt cctcggcgat
      841 cctgcgcagc acctcgtcat cgaggttgcg tgagatcatc tgccgcagag gggcgttgtc
      901 tgtcagagcg tcgccggcga ttgcaccaag caagggcgcg cgcttctcaa agatgtcgct
      961 cgcactcgtc tccgtgtaga cggccttcag ctgtggatca taggcgcgac cgagaaaggc
     1021 gaagggcgcc gacagggctc ccgtgctgac gccagtcacc atgtcgaatt ccggtctgtc
     1081 cccccggtcg ctccacccca ccagcagtcc ggcaccaaaa gctccgtcgt cgccgccgcc
     1141 cgaaatcgcc agaaatcgtc gtgttgcaga aacgccgcgc gccagattgc ggcgctgatt
     1201 tgccttcacc gcgatgtcga ggatctgttt cgtttcggcg acataaaagc gggcgtccgg
     1261 aatatccaga atgtcggcct gcttcgcttg cgcatacgtc accgcgggga gacgctcgag
     1321 cgtggcgcaa ccgctgatcc ccgcgcccag tgcggcaagc agcccgaaca agctagcgcc
     1381 ttgtaggctg cgcatgtgcg agccggcggt cacaattctg ctgagcatct actccacgtc
     1441 cccgaaccaa agcataggcg aacagcggtg aggcaacaaa atggcaacca atgcgacggc
     1501 aggcggtact gatataggcc cgcgcggcat tgggaaagca aaggcttgaa atctttccac
     1561 agccacacct ttatctcgac cccgcgaagt gcgaattgat gaactgtcgc tcgaaagcac
     1621 tcccgaccac ccgttgtgcc gcggttggac cttggcagtc ttccgaatga cgacttgcta
     1681 tgccattgta ctcgctgagg gttatcctac cttcgaccag cccacggatg ttgagatgtg
     1741 caaactacag tgcgcgttga ggggcagctt tgacctcctt tcgtcaattt cgagccgctt
     1801 ttctttcgcc tatgcgattg tcgttttttt catgggcgtc gtcgtaacgc aaagcgcagc
     1861 tgcgggaacg ctcgacgacg tccgctcaag agacaagttg atctgcggcg tcagcgaagg
     1921 tcttccaggt ttttcggaga aggacggatc gggcgtttgg cgcggatttg atgttgattt
     1981 ttgcaaagct gtcgccgccg cggtgctcgg cgataccgga aaagtcgaat acgtgccgct
     2041 gtcggcgacc attcgcttcg atgcattgac ggatcgccgc atcgaccttc tgtcgcgcaa
     2101 tagtacttgg accatgtcac gcgacctgga gctcgggatc gaattcgcgg gggttagcta
     2161 ttttgatgga caaggatttc ttgttccaac tttgtttggg gcgtccagcg ctcttcaact
     2221 taatggcgcc agaatctgcg tggccagcgg cacctgtgtg taccgaaaac ctaaacccaa
     2281 acgtaatgat gatgatgccc gccaaggatc gggtgtgatg tgatagcccc gacccgctga
     2341 accgggcgaa acgctggggc atctttgccc aatgatcggt gtgttctgat cttgttgcaa
     2401 tacccagaat aggtttgcag catccgacgg a
//
LOCUS       DATDHO010000584         1987 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_177051, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000584 DATDHO010000000
VERSION     DATDHO010000584.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1987
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177051"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..1274
                     /locus_tag="VIY07_11190"
     CDS             156..1274
                     /locus_tag="VIY07_11190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY6382353.1"
                     /translation="MRIAQIAPPMESVPPAYYGGTERVVSYLTEELVRQGHLVTLFAS
                     GDSLTSAELVSSTSVALRLTPTVQDPIPYYLLMLDKVRERADEFDILHFHIDQFHFPI
                     FRPIAHRTLTTLHGRQDLTDLQTLYRGFSEMPLVSISNAQREPAPFAQYVATVYHGIP
                     IDLHAANGNPSGNYLAFLGRICPEKRVDHAIAIARASGLPLKIAAQVDKVDEVYFRET
                     IAPLLDGPDVEFVGEINERAKTEFLGNALALLFPIDWPEPFGLALIESMACGTPVLAF
                     RRGSVPEIVDEGVTGSIVETPEEAIQALPGVLALDRNAVRRRFEARFTATRMAHDYVK
                     LYRASPEAPLRRDRDGKGRSVHSRPNRINGNGKQSHFD"
     gene            1295..>1987
                     /locus_tag="VIY07_11195"
     CDS             1295..>1987
                     /locus_tag="VIY07_11195"
                     /inference="COORDINATES: protein motif:HMM:NF026092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching N-terminal
                     domain-containing protein"
                     /protein_id="HEY6382354.1"
                     /translation="MDFIVDTIATPGPSARRKRTLKMSDSFVVLDSHGDIGASPGGPD
                     GFFHCDTRFLSRLELRFNRMAPLLLGSNVTDDNAILNVDLTNPDIFVDDQRVLKKDTL
                     HIIRTTFVSNRSLYQRLGIRNHGQDPVAIELTVIFTSDFADIFEVRGIHRAQRGATTK
                     DVTSARSVELRYDGLDGKARKLDIGFDPAPTQLGKRQASYLLTLAPNERFSFVVVASC
                     DLREGASPPNFFK"
BASE COUNT          396 a          611 c          557 g          423 t
ORIGIN      
        1 agcctttttc gcgcttgtgc gttgaatgcc ttgagaggag cgcgccaatc gacgcactgg
       61 cagtgtttct tcttcgcgaa gtcactaatt cgtaggacgt cgcttagacc ccacgttccg
      121 catccgtcta ttcttggaga acgcagaggt gatcgatgag gatcgcgcaa atcgctcccc
      181 caatggaaag cgtgccgcct gcctactatg gaggcactga gcgcgtcgtt tcatacctga
      241 ccgaagaact ggtcaggcaa ggtcatcttg tcactctatt cgccagcggg gactcgctaa
      301 cctcggcaga gcttgtctct tccacaagcg tcgcgcttcg acttacgccg acagtgcagg
      361 acccgattcc ctattacctg cttatgctcg ataaggtgcg cgagcgcgcc gacgaattcg
      421 atattctgca ttttcacatc gatcagtttc attttccgat ctttcggccg attgcgcata
      481 ggacgctcac cacgctgcat ggccgacagg acctgaccga cctacaaacg ctctaccgcg
      541 gcttcagtga gatgccgttg gtctcgatct ccaacgcgca gcgtgagccg gcgccgtttg
      601 cgcagtatgt ggccacggtc tatcacggga ttccaattga cctgcacgcg gcgaatggta
      661 acccgagcgg gaactacttg gcgttccttg ggcgcatttg cccagagaag cgcgtcgacc
      721 acgctattgc gatcgcccgc gccagcggtc ttccgctgaa aatcgctgcc caggttgaca
      781 aggtcgacga agtctacttc cgcgaaacga tcgcgccgct tcttgacgga ccggacgtag
      841 agtttgtggg agaaatcaac gaacgggcca agacggaatt tctcggtaat gcgctcgcat
      901 tgttgtttcc aatcgactgg ccagaaccgt tcgggcttgc ccttatcgag tccatggcgt
      961 gcggcacgcc ggttctcgcc tttcgacgcg gttcggtgcc cgaaatcgtc gatgaagggg
     1021 tgaccgggag cattgtcgaa acgccggaag aggccataca ggcactgccg ggcgttttgg
     1081 ctctcgatcg caatgccgtg cggcggcggt tcgaagcacg tttcaccgcc acgcgcatgg
     1141 ctcatgacta cgtcaagctc taccgggcct cgcctgaagc gccgctgcgc cgcgatcgcg
     1201 acggaaaggg tcgcagcgtc cactcgcggc caaatcggat caacggaaac ggcaagcaat
     1261 cgcatttcga ttgagccgga ccgggacgct ctccgtggat tttatcgtcg atacgatcgc
     1321 tacgccgggg ccgtcggcga gacgcaagcg cacgctcaag atgagcgaca gctttgtcgt
     1381 cctcgacagc cacggggata ttggagcctc acccggcggt cccgacggct tctttcactg
     1441 cgatacgcgc ttcctctccc gtctcgaact ccggttcaat cgcatggcgc ccctgctgtt
     1501 gggctccaat gtcaccgacg acaacgcgat tctgaatgtc gatttgacca acccggacat
     1561 ctttgtcgac gatcagcgcg ttctgaaaaa ggacacactg catatcatac ggacaacctt
     1621 cgtctcgaac cgctctctct atcagcggct gggaattcgc aatcacggcc aagatccagt
     1681 cgcaatcgag ctcactgtca ttttcaccag cgatttcgcc gacatcttcg aggtccgcgg
     1741 aatccaccgc gcacaacgtg gcgccacgac gaaggatgtg acgagtgcgc gaagcgtgga
     1801 gcttcgctac gacggcctcg atggcaaggc gcggaagctc gacatcggct ttgatcccgc
     1861 cccgacgcaa ctgggcaaac ggcaggcgtc gtacctgctt acgctggctc cgaatgagcg
     1921 attttctttc gtcgtcgtag ccagttgcga cttgcgcgag ggagccagcc caccgaactt
     1981 tttcaag
//
LOCUS       DATDHO010000585         4363 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_74065, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000585 DATDHO010000000
VERSION     DATDHO010000585.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4363
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_74065"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            93..1064
                     /locus_tag="VIY07_11200"
     CDS             93..1064
                     /locus_tag="VIY07_11200"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6382355.1"
                     /translation="MKRILCAAAFAAMALAGPAAAQDFPTRPITMVIPFAAGGPQDTI
                     GRIIAQRMSELLGQQVVVENVGGAGGMTGSKRVADAKPDGYTMVLGSVGTHAQNQTLY
                     KRPLYNVVNDFTPVAYLAITPIALITRPDLPVNNFKEFIAYAKANQGKMQFGSAGAGS
                     ATHLGCVVLNSAMGTTITHVPYKGTGPAMQDLVGGRIDFLCEIIATAKPQIDGGKVKG
                     VAIMTKDRSPVLPSLATTGEQGTDVQAYTWSSLFLPKGAPADVVKKLNEAAAAAIATP
                     SVQERLAQLGATVAAPNERSPQWLADFVKSEVKKWEEPIKASGVQVE"
     gene            1116..1523
                     /locus_tag="VIY07_11205"
     CDS             1116..1523
                     /locus_tag="VIY07_11205"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018240220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY6382356.1"
                     /translation="MADIKILNPDALGKPLGQYSHLTRVKASEFVFIAGQVGVDRDGK
                     VVGVDDFDAQCVQTFANIEAALKSVGAGWGNIVQFTTYLVHSQDIPKFMKYRLHEFPK
                     MFTNGAYPPNTLLMVDRLVQEALLVEVQAVAAL"
     gene            complement(1524..1913)
                     /gene="hpxZ"
                     /locus_tag="VIY07_11210"
     CDS             complement(1524..1913)
                     /gene="hpxZ"
                     /locus_tag="VIY07_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalurate catabolism protein HpxZ"
                     /protein_id="HEY6382357.1"
                     /translation="MEIDLPEVVAEVKAAFERYEKALVSNDVPVLDELFRDDPRTVRY
                     GATEILYGYDEIRSFRAARSPVALGRKLSRTIITTFGRDFAVVSTLYERPSAPGKIGR
                     QTQTWVKFSEGWRVVVGHVSLMDKSAT"
     gene            2042..3013
                     /locus_tag="VIY07_11215"
     CDS             2042..3013
                     /locus_tag="VIY07_11215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6382358.1"
                     /translation="MKCLRSLMIALVWLCPALAVAQDFPNKTIRLIVPFPPGGPNDTI
                     ARVVGQRMSEILKQPIVIDNRSGQGGVVGTDVVAKAAPDGYTIAIASAGALAISPSME
                     KVAYDTLRDLQPITLVAKVPEMLVVATSVPANNMQELVALAKSQPGKLNFASSGPGSM
                     PHLAGELFKLTAGINIVHVPYRGAAPAVNDLLAQQVQMVFLDLPVLLPQIRAGKLKPI
                     AVGAMERVASAPDVPTTVEVGMAHLQTENWYGMVAPAKTPPQIVAILNKAAVEAMKDP
                     TVVEKLASQGATLVGDTPEHFRDYIDSETKKWAKVIADAGVQTEKDK"
     gene            3032..3655
                     /locus_tag="VIY07_11220"
     CDS             3032..3655
                     /locus_tag="VIY07_11220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY6382359.1"
                     /translation="MSHAETFVLRSTPTSPFGRKVRMAIDVLGLNGCVTVVPADPLDE
                     SDTLRKQNPLGKMPCLILPDDSTIYDSGIIIEFLQDVAGTDRLLPLRGRERYRALSLS
                     RLADGVMDASVLVVYENRFRPDLPHSPRWLAHQRGKILRGLTEFENSLPDPNKTDIVS
                     IGLSCALGYLDWRKQVDWRTAYPALVSWLERFSAHEPAFERTRAKDT"
     gene            3652..>4363
                     /locus_tag="VIY07_11225"
     CDS             3652..>4363
                     /locus_tag="VIY07_11225"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6382360.1"
                     /translation="MMEHTIDTVADPPYWMATPSKPKLRLPTGACDAHVHVFGPRTRF
                     PFAERRGYTPSDAPKEMLFRLHERLGIQHCVIVQPACHGFDNSVTADATAATGGSYRG
                     VALVPLTVSDVDLKRLDAAGLCGARFHYMGHLAAGPRIDDVIAFAKRLADLGWHLQIH
                     MEASLIAELAPALRRSPVPVVIDHMGRLDASLGPEQPAFRALLALLNDKNVWVKVSGS
                     DRVTRQGPPYTDAVPFARK"
BASE COUNT          884 a         1353 c         1287 g          839 t
ORIGIN      
        1 cggaggagat tgtcgaggtc ggctgagccc ctgccccgct tgaccatcgg cgtgttgccg
       61 cgcaagtctt tgctcgtttg gtggaggaaa caatgaaaag gattttgtgt gctgcggcct
      121 ttgccgcaat ggcattggcc ggaccggccg ctgcccagga tttcccgaca cgcccgatta
      181 caatggtcat tccgttcgcc gccggcggac cccaggacac catcggtcgc atcatcgccc
      241 agcgcatgag cgaattgctc ggccagcagg tcgtcgtcga aaacgtcggc ggcgctggcg
      301 gcatgaccgg ttcgaagcgc gtcgccgatg cgaaacctga cggctacacg atggtgctgg
      361 gcagcgtcgg cacccatgcg caaaatcaga cactctataa acgcccccta tacaacgtgg
      421 tgaatgactt cacgccagtc gcctatctcg cgatcacacc gattgcgctc atcacccggc
      481 ccgatctgcc ggtaaacaat ttcaaggaat tcatcgccta tgcgaaggcc aatcaaggca
      541 agatgcaatt tggatcggcc ggcgccggtt cggccactca cctcggctgc gtcgtgctca
      601 acagcgccat gggcacaacc atcacgcatg ttccctacaa gggcaccggc ccggcgatgc
      661 aagacctcgt cggtgggcgc atcgatttcc tgtgcgaaat catcgccact gccaagccgc
      721 aaatcgacgg cggcaaggtg aagggcgttg ccatcatgac caaggaccgc tcgccggtgt
      781 tgccaagtct cgcaacgact ggcgaacaag gaacggatgt gcaggcttat acctggagtt
      841 cactgttcct gccgaaaggt gcgcccgccg acgtcgtgaa gaagcttaac gaagccgccg
      901 ccgctgccat cgcgacgccg tcagtgcagg aacggcttgc ccagcttggc gcgacggtcg
      961 cggcacccaa cgagcgcagt ccgcaatggc tcgcagactt cgtcaaaagc gaagtcaaga
     1021 agtgggaaga gcccattaaa gcgagcggcg tccaggtgga gtgatacgat tgccgcagcc
     1081 ggcttgccac tgacacctag gagcaggagt caaggatggc cgacatcaag attctcaacc
     1141 ccgatgcgct cggcaagccg ttggggcagt actcgcacct cacgcgcgtg aaggcatcgg
     1201 aatttgtctt catcgccggc caggtggggg ttgatcgaga tggcaaggtc gtgggcgtcg
     1261 atgatttcga cgcccaatgc gtgcagacct ttgccaacat tgaggcggcc ctaaagtctg
     1321 tcggcgcagg ctggggcaac attgtgcagt tcacgaccta tctcgtgcac tcgcaagaca
     1381 ttcccaaatt catgaagtat cgcctgcacg aatttccgaa gatgttcacg aacggcgcct
     1441 atccgcccaa cacgttgttg atggttgacc ggctggtgca ggaagcactg ctggtcgaag
     1501 tgcaggcagt tgcggcgttg tgactacgta gccgacttgt ccatcaggct gacgtgaccg
     1561 acgacaacgc gccagccctc ggaaaatttc acccaggtct gcgtctgccg gccgattttt
     1621 ccaggtgcgg acgggcgctc gtacaacgtc gagaccacgg caaaatcacg accgaacgtg
     1681 gtgattatcg tccgcgacaa cttgcggccg agtgcgaccg gcgagcgggc cgcgcgaaac
     1741 gacctgatct cgtcgtagcc atacagaatt tctgtcgcgc catagcggac ggtccgcggg
     1801 tcgtcgcgaa ataattcatc gagcaccggc acgtcgtttg agaccagtgc cttttcatac
     1861 cgctcaaacg ctgccttcac ctcggccacg acttccggca gatcgatttc cattgtctgt
     1921 actcgccttt cggttcaagt ctttcggtgc ggctggcgcc cctgctctgc aatggcataa
     1981 gctaaagaca agacaagcgt gccgcgagtg ttgtttcgcg gcgaatgcgg ggaggtttgc
     2041 cgtgaaatgt cttagatcac tgatgatcgc actggtttgg ctgtgccctg ccctcgctgt
     2101 ggcgcaggat tttcccaaca agacaatcag gctgatcgtg ccgttcccgc ccggcggccc
     2161 caacgacact atcgcgcgcg tagttgggca acgtatgtcg gagatcctca agcagccgat
     2221 cgtaatcgat aatcgctcgg gccagggcgg cgtcgtgggc accgacgtgg tcgcaaaggc
     2281 cgcaccggat ggatacacaa tcgccatcgc cagcgccggt gcacttgcga tcagcccaag
     2341 catggagaaa gtcgcctacg acacgctcag ggatctgcaa ccgatcacgc tggttgcaaa
     2401 ggtgccggag atgctcgttg tcgcaaccag cgttcccgcc aacaacatgc aagaattggt
     2461 ggccctggcg aaatctcaac cgggcaagct caactttgca tcttccgggc ccggcagcat
     2521 gccgcacctc gcgggcgaat tgttcaagct caccgcgggc atcaacatcg tgcacgtgcc
     2581 gtaccgcggt gctgcgcctg cggtgaacga tctgctcgcc cagcaggtgc aaatggtgtt
     2641 tcttgatctg ccggtgctgc tgccccaaat cagggccggc aagctaaagc caatcgcggt
     2701 cggtgcgatg gaacgggtgg cgagcgcgcc cgatgtaccg accactgtcg aggtcggcat
     2761 ggctcacctg cagaccgaaa actggtacgg aatggttgca ccggccaaga ctccgcccca
     2821 gatcgtcgcc atccttaaca aggccgcggt cgaggccatg aaggacccga ccgtggtcga
     2881 aaaactggca agtcagggcg ccaccctggt tggcgacacg ccggaacact tccgcgacta
     2941 catcgacagc gaaaccaaaa agtgggcgaa agtgattgct gacgccggag tgcaaaccga
     3001 aaaagacaag taagcagtcc agcgatttcg catgtcccac gcggaaactt ttgtattgcg
     3061 ctcgactcca acctcgccat tcggacgcaa ggtccgcatg gcaatcgatg tgttgggttt
     3121 aaatgggtgc gtcacggtcg tccccgccga tccgcttgac gagagcgata cgctgcgaaa
     3181 gcaaaacccg ctgggaaaga tgccctgtct tatcctgccc gacgacagca cgatttacga
     3241 cagcggcatt atcatcgagt ttctgcagga tgtcgctggc acggatcgcc tgttgccgtt
     3301 gcgcgggcgc gagcgctatc gcgcgctgtc gctctcgcga cttgccgacg gcgtcatgga
     3361 tgcgtccgtt ctcgtcgttt atgagaaccg ctttcgtcct gatctgccgc attcgccgcg
     3421 ctggctcgcc catcaacgcg gcaagatcct ccgcggcctg acggagttcg aaaactcgct
     3481 gccagatcca aacaaaaccg atatcgtgtc gatcggcttg tcgtgcgcgc tcggctatct
     3541 cgactggcgc aagcaggtcg actggcgtac cgcctatccc gccctggtct cctggttgga
     3601 acggttttcc gcccacgaac cggctttcga gcgcacccgc gccaaggaca catgatggag
     3661 cacaccatcg atacggtggc cgacccgcct tattggatgg ccacgcccag caagccgaag
     3721 ctgagattgc cgactggggc atgcgacgct catgtgcatg tctttggccc acggacccgc
     3781 tttccttttg ccgagaggcg cggctacacg ccctccgacg cgcccaagga aatgctgttc
     3841 agattgcacg agcggcttgg catccagcat tgcgtgatcg tgcaaccggc ctgtcacggc
     3901 ttcgacaatt cggttaccgc cgatgccacg gcggctacag gcggctccta cagaggcgtt
     3961 gccctcgttc cactgactgt ttcggacgtc gacctcaagc ggctcgatgc cgccggtctg
     4021 tgcggcgccc gcttccacta catggggcat ttggcggcgg gcccgagaat tgacgatgtc
     4081 atcgctttcg ccaagcggct cgccgatctc ggctggcatc tgcaaattca catggaagcg
     4141 tcactgatcg cggaattggc gcccgcgctc aggcgctcgc ccgttcccgt tgtgatagac
     4201 cacatgggac gcctcgatgc ctcgctcgga ccggagcagc cggctttcag ggcgttgctc
     4261 gcgctgctga atgacaaaaa cgtttgggtg aaagtgagcg gctcggaccg tgtcacccga
     4321 caaggcccgc cttatacgga cgcagtccca ttcgccagga agc
//
LOCUS       DATDHO010000586         3212 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_276737, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000586 DATDHO010000000
VERSION     DATDHO010000586.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3212
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_276737"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..818)
                     /locus_tag="VIY07_11230"
     CDS             complement(<1..818)
                     /locus_tag="VIY07_11230"
                     /inference="COORDINATES: protein motif:HMM:NF019845.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY6382361.1"
                     /translation="MPIPTTMSAVVLHDADDMRVEKRSLPELGPGEVLLKVNVASICG
                     TDLKVLHRTLQGQPAGEFIMGHEYAGTVAALGPGVNEFQIGERVAVEVHKGCDRCENC
                     IKGWYTSCLNYGDLAKGHRAKGLTCDGGFAEYAVNHINTLYRLPDNLTFEQACMVTTA
                     ASPLWAIDLMGGYVAGETVLVLGPGPIGLIAVQLCKALGAERVILSGTRESRLEIGKQ
                     HGADFTINVRKENLADRVREITQGKGADSVLECAGGPTSMQEALENVKRGGRIGV"
     gene            complement(880..3069)
                     /locus_tag="VIY07_11235"
     CDS             complement(880..3069)
                     /locus_tag="VIY07_11235"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY6382362.1"
                     /translation="MKSPVDQGRRNFLKASTATGGGLIITFCIPGIARLAEATVGATK
                     LNSFLRIGTDGKVTFSCGQVEMGQGAHNALAMMIAEELEVDFDNVRIEQGGIDPAFGN
                     PRYSGFKAVGGFQATGGSSSVRNVGVPVRRAGAAARAMLTTAAAEKMNVSQTECVAER
                     GWVTHGPTGKRVSYGTVASAAARIAPPAEPVLKQPAQFRILGKATKRYDIPLKVNGKA
                     IYGIDIKRPGLLTAVVARSPVLGGKVVRFNADNALKMKGVKKVVQVSTGVAVVADSFW
                     TAKKGRDALDVVWDEGPMAQVSSADMYKSWAELAKGTTAAERLKVGDVDAALGSGAKR
                     VESVYEVPFLAHTCMEPMNATAHFKGDSVEIWAPTQAQSWNQHWVSQLTGLKPEAIAI
                     HTTYLGGGFGRRLESDYAVEAVEVSRAAGNVPVKVVWTREDDMQHSQYRPASYNMLSA
                     ALDPNGMPTAWRHRIVGASILQYFKTFGHLLRKDGMDPTSVQGAADYFPYDIPNVYVD
                     YVNNNPGVPSGFWRSVGNSQNGFILESFVDELAYAAGKDPYEYRRQLLSKPLAARLLA
                     VLDLAAEKAGWGKSLPPGMHRGIAAHFAYGGYCSQVAEVSVAKDGTVKVHRVVAAIDS
                     GWVVNPDTIVAQIESGIIYGLTAALYGEITIKDGRVEQSNFNDYKALRMEETPKIEVH
                     ILQGQGDQGGIGEPGTPPIAPAVSNAIFAATGKRIRKLPIKPELLSA"
     gene            complement(3071..>3212)
                     /locus_tag="VIY07_11240"
     CDS             complement(3071..>3212)
                     /locus_tag="VIY07_11240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY6382363.1"
                     /translation="ALLTKNKSPSDADIDKSMSGNICRCGTYNRIRKAIHTASTMTRK
                     GA"
BASE COUNT          549 a         1044 c          961 g          658 t
ORIGIN      
        1 accccgatgc ggccgccgcg tttgacgttt tctagcgcct cttgcatgga ggtcggaccg
       61 ccggcgcatt cgagaacgga gtcagcgccc ttgccctgcg ttatctcgcg tacacggtcg
      121 gccaaattct ccttgcgcac gttgatcgtg aagtccgcac catgctgttt gccgatttcc
      181 aggcgcgact ccctggtgcc actaaggatg acccgttccg caccaagcgc cttgcagagc
      241 tgcaccgcga tgagaccgat cggccccggc ccgaggacca gcacggtctc gccggcaacg
      301 tagccaccca tgagatcgat ggcccagagc ggcgaggcgg cggtggttac catacaggcc
      361 tgctcaaatg tcaggttatc gggcaaccgg taaagtgtgt tgatatgatt gaccgcgtac
      421 tccgcaaagc cgccatcgca cgtgagacct ttcgcgcggt ggcccttcgc gagatcgccg
      481 taattcaggc acgaggtgta ccagcctttg atgcagtttt cgcagcggtc acagcccttg
      541 tgcacctcca cggcgacccg ctctccgatc tggaactcgt tgacgcctgg tcccagcgcg
      601 gccacggttc cggcgtactc atggcccatg atgaactcac ccgccggttg cccctggagc
      661 gtcctgtgca ggaccttcaa gtcggttcca cagatcgacg cgacatttac cttgaggaga
      721 acctcgccgg ggccaagctc cggcaacgac cgcttctcca cgcgcatatc gtcggcgtcg
      781 tgcagtacca ccgcgctcat cgtagtggga atcggcatgg accttacctc tctccgtttc
      841 ggacttacgc tgcgactata attacccctg ctcgatttct cacgcgctca gcagctcagg
      901 cttgatcggg agcttgcgga tacgcttgcc agtcgcggcg aagatggcgt tggagaccgc
      961 gggcgcgatc ggcggcgtgc cgggctcacc aatgcctccc tggtcgccct gcccctgcag
     1021 aatgtgcacc tcgatcttgg gcgtctcctc catgcgcagc gccttgtagt cgttgaagtt
     1081 cgactgttcg acacggccgt ctttgatggt gatctcgccg taaagcgcgg cggtcaagcc
     1141 gtagatgatg ccgctttcga tctgtgctac gatcgtgtcg ggattgacga cccatccgga
     1201 atcgatggcc gctaccacgc gatgcacttt caccgtgccg tctttagcca ccgagacttc
     1261 ggcaacctgc gagcaatagc cgccgtaggc gaagtgcgcc gcaatgccac ggtgcatacc
     1321 tgggggcagc gacttgcccc agcccgcctt ctcggcggcg aggtcgagca ccgcgagcaa
     1381 tctggcggcg agcggcttac ttagaagctg ccgccgatac tcgtagggat ctttgccggc
     1441 cgcataggca agctcgtcaa cgaagctctc caggatgaaa ccgttctgcg agttaccgac
     1501 cgagcgccag aaacccgagg gcacacccgg gttgttgttg acgtagtcca catagacgtt
     1561 aggaatatcg tacggaaagt agtcggctgc gccctgcacc gaggtgggat ccatcccgtc
     1621 cttgcgtagg aggtgtccga aggtcttgaa atactgcagg atcgaggcgc cgacgatgcg
     1681 gtgccgccac gcggtcggca tgccgtttgg gtcgagcgca gcggagagca tgttgtacga
     1741 cgccggccgg tactgggagt gctgcatatc gtcctcgcgc gtccagacca ccttgaccgg
     1801 tacgttgccg gcggcgcgcg agacctccac cgcctctacg gcataatcac tctcgagcct
     1861 tcggccgaag cctccgccca gataggtcgt atggatcgcg atcgcctcgg gcttaaggcc
     1921 ggtgagctgg gagacccaat gctggttcca cgactgcgcc tgggtaggcg cccagatctc
     1981 gaccgagtcg cctttgaaat gcgcggtcgc attcatcggc tccatgcagg tgtgggcgag
     2041 gaacggcacc tcatagaccg actcgacacg ctttgcgccg ctgccgagcg ccgcgtcgac
     2101 atcgcccact ttgagccgct cggcggcagt ggtgcctttg gcgagctcgg cccatgactt
     2161 gtacatgtcc gccgagctca cttgcgccat tggcccctcg tcccagacaa cgtctagcgc
     2221 gtcccgcccc ttctttgcgg tccagaaact gtcggcgacc accgcgactc cggtactaac
     2281 ttgaacgacc ttcttcacac ccttcatctt gagcgcgttg tcggcattga atcgcaccac
     2341 cttgccaccc aaaaccgggc tgcgcgccac caccgcggtg agaaggccgg gacgcttaat
     2401 atcgatgccg tagatcgctt ttccgttgac cttgagcggg atgtcgtagc gcttggtcgc
     2461 cttaccgagg atcctgaact gcgcgggctg cttgagcacc ggttcggctg gcggggcgat
     2521 cctggccgcc gccgacgcga ccgtaccgta cgaaaccctt ttcccggttg gcccgtgagt
     2581 cacccagccc ctctccgcga cacactcggt ctggctgacg ttcattttct ctgcggccgc
     2641 ggtagtcagc atggcgcgcg ccgcggcgcc agcgcggcgc accggtacac cgacgttgcg
     2701 cacgctcgag ctcccgccgg tggcctggaa tccacccacc gccttgaacc cgctgtagcg
     2761 tggattgccg aacgcggggt cgatgccgcc ctgttcgatg cggacattat caaaatcaac
     2821 ttcaagctct tcggcgatca tcatggcgag cgcgttgtgg gctccctgtc ccatctcgac
     2881 ctggccgcac gagaaggtga ccttcccatc tgtgccgatc ctgagaaagg aattgagttt
     2941 ggttgctccc acggtggctt cggcaaggcg tgcgatgccg gggatacaaa aagtgatgat
     3001 caggccgccg cccgttgcgg tgctggcctt gaggaagttt cttcgacctt ggtcaacagg
     3061 gctcttcatg tcacgccccc tttctcgtca tcgtcgaggc ggtgtggatc gccttacgga
     3121 tgcggttgta ggtgccgcag cggcagatgt tgcccgacat cgacttgtcg atgtcggcat
     3181 ccgagggact cttgttcttg gtgagcagcg ct
//
LOCUS       DATDHO010000587         5810 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_28220, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000587 DATDHO010000000
VERSION     DATDHO010000587.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5810
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28220"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1118
                     /locus_tag="VIY07_11245"
     CDS             <1..1118
                     /locus_tag="VIY07_11245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sorbosone dehydrogenase family protein"
                     /protein_id="HEY6382364.1"
                     /translation="AFAKGLEHPRWLFVLPNGDVLVAESNAPQRPDDAKGIKGWAYKT
                     VQKWVGAGVPSPNRIILLRDKDGDGVAETRSVFLKNLYSPFGMALIGTDLYVANADAI
                     MRFKYQEGATEITAAGEKVADLPAGSINHHWTKNIIPSKDGAKLYATVGSNSNVGENG
                     LDAEKMRATILEVDLKSGQPRVFASGLRNPNGMGWEPQTGQLWTVVNERDELGSDLVP
                     DYLTSVKEGAFYGWPFSYWGQHVDDRAKPQNPELVAKAIRPDYALGNHVAPLGLVFAE
                     GAKLGDQFARGVFIGEHGSWNRKPLSGYKVVFVAFSDGKPTGIPIDVLTGFVSDDKKA
                     FGRPVGVTIAKDGSLLVADDVGNTIWRVSQAAQASTR"
     gene            1181..3187
                     /locus_tag="VIY07_11250"
     CDS             1181..3187
                     /locus_tag="VIY07_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin domain-containing protein"
                     /protein_id="HEY6382365.1"
                     /translation="MNRLSEATSPYLLQHKDNPVDWWTWGPEALAEAKSSNRPILLSV
                     GYAACHWCHVMAHESFEDEATARVMNDLFVNIKVDREERPDIDQIYMNALHLLGEQGG
                     WPLTMFLTPHAEPVWGGTYFPKESRFGRPAFVDVLREVARLFREEPTRIEQNRAALLS
                     RLAEKARPAGKVTIGLNELTAIAMQIGNMFDSVNGGLRGAPKFPQPAIVEMLWRAGLR
                     TNDVRFFETVEHSLERMSEGGIYDHLGGGFSRYSVDEMWLVPHFEKMLYDNAQLLELL
                     ALAFQRSGNRLFRQRAGETVGWLAREMTTREGAFAASLDADSEGEEGKFYVWSYQEVI
                     KALGLEDGEYFSRHYDVKPGGNFEGHSILNRLADLPRTEEDENRLAHLRAKLLAVRDM
                     RVRPGLDDKVLADWNGLMIAALVNAAIILDEPSWLNMARQAFAFIELNMTRGNRLGHS
                     WRGHRLLFPGLASDFANMIRAALALHEATGERIYLERALEWQVAFDSHYIDSETGRYF
                     LSADDASDLVLRPHSTQDDATPNPNAVAAQNLVRLAAMTGDNKWREKADMLIDGILSA
                     AERNLFGHVALLNALDLRLRGAEIVVTGKESEPFVQAALRLPFVERIVLRAVSPTNLP
                     ASHPAQEKLKVAPVTAAFVCVGERCSLPLIHPGDIAASVAAMRS"
     gene            3454..4851
                     /locus_tag="VIY07_11255"
     CDS             3454..4851
                     /locus_tag="VIY07_11255"
                     /EC_number="1.11.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF015131.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HEY6382366.1"
                     /translation="MDRDPKGAIASFQPNGPTFTKNNAFFKDMGTNGRSCFTCHRPEN
                     AWSVSANDIAERFEKSAGTDPIFRLVDGATCPSDDVSTLRARRRAYKLLTEKGLIRVG
                     LAVPAAGEFVVTAIDDPYCCSTKPETGSGVLSMYRRPMPTTNIAFLSAIMWDGREPAL
                     ESQAVSATLVHAQAKNAPTPEQVAQIVAFQKGIFTAQIFDNRAKFLTGDNARGGPVAL
                     SSQEFYIGINDPLGLNPKGIPFTPEIFDLYRPWLTAGQRHDHDGLGTPMANVSELFRT
                     VNVTDDWRHNDHERGMVNEHRRSVARGEEVFNKTRINIAGVSGLNDELKVDSIPGSCG
                     ICHDSPNIGNHSVKAPLNIGVPDAGDKKPPALDISGLPVFTLKCTNVPDGDPLKNKVY
                     KVTDPGRAMMSGKCKDIGRFKGPILRGLAARAPFFHNGSAATLRDVVDFYDQRFGIGF
                     TRKEKTDLVNFLNTL"
     gene            complement(4941..>5810)
                     /gene="rho"
                     /locus_tag="VIY07_11260"
     CDS             complement(4941..>5810)
                     /gene="rho"
                     /locus_tag="VIY07_11260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEY6382367.1"
                     /translation="KINFDNLTPLYPDERLKMEYEDPTKKDLSARVIDIVAPIGKGQR
                     ALIVSPPRTGKTVLLQNIAHSITANHPETYLIVLLIDERPEEVTDMQRSVKGEVISST
                     FDEPASRHVQVAEMVIEKAKRLVEHQRDVVILLDSITRLGRAYNTVVPSSGKVLTGGV
                     DANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSELILDR
                     KVADKRTFPAIDITRSGTRKEELLTDPAILKKMYVLRRILNPMGTMDAIDFLLDKLRN
                     TKSNSEFFESMNT"
BASE COUNT         1244 a         1623 c         1732 g         1211 t
ORIGIN      
        1 acgcatttgc caaggggctc gagcatcccc gctggttgtt cgtgctgccg aacggcgacg
       61 tgcttgtcgc cgagagcaat gcgcctcaac gtccggatga tgcaaagggg atcaaaggct
      121 gggcttacaa gacggtacag aaatgggtgg gcgccggcgt tcccagcccc aaccgcataa
      181 tcttgctgcg cgacaaggac ggtgacggag tcgccgagac acggagtgtc tttctaaaaa
      241 atctctattc gcccttcggc atggctctga tcggcaccga tctctacgtc gccaatgcag
      301 acgcgatcat gcgattcaaa tatcaggagg gtgcaacgga gatcacggcc gccggcgaga
      361 aggtggcgga tcttcctgca ggatcaatca atcaccactg gacgaagaat atcatcccga
      421 gcaaagacgg ggccaagctc tatgcgacgg tcggctccaa cagcaacgtc ggtgagaatg
      481 gtctcgatgc cgaaaagatg cgtgcgacta ttctggaagt cgatctcaag agtgggcagc
      541 cgcgtgtatt cgcctccggt ctgcgcaatc cgaacggaat ggggtgggaa ccgcaaaccg
      601 gacaattgtg gacggtcgtc aacgagcgtg acgagctcgg cagcgatcta gtgcctgact
      661 atctcacgtc tgtgaaggag ggtgcctttt acggctggcc tttcagttac tggggccagc
      721 acgtcgatga tcgtgcaaag ccacaaaatc cggaactcgt cgcaaaagca atccggccgg
      781 attacgcgct cggcaatcac gtagcgccgc tgggactcgt cttcgccgaa ggcgcgaagc
      841 tgggagatca attcgcgcgc ggcgtcttca tcggggaaca cggctcgtgg aatcgcaaac
      901 cgttaagcgg ctacaaggtc gtgttcgttg ctttctccga tggaaaaccg acgggtatcc
      961 cgattgatgt cctcaccggt tttgtcagcg acgacaagaa ggccttcggc cgtccggtag
     1021 gcgtaacaat tgcgaaggat ggatcgctgc ttgtggccga tgacgtaggc aatacgatct
     1081 ggcgcgtctc gcaagcagcg caagcgagca cgcgctagat gatttcggtt aatcctgatc
     1141 cgcgctaggc tgcgaggtta gctgctcgga aaatgcgcac gtgaaccgcc tcagcgaagc
     1201 aacatcgcca tatctgctcc agcacaagga caatccggtg gattggtgga cctggggtcc
     1261 tgaggcattg gccgaagcga aatcctccaa tcgaccaatt ctgctttcgg ttggttatgc
     1321 cgcgtgccac tggtgtcacg tgatggcgca cgagtcgttc gaggacgagg ccacggcccg
     1381 cgtgatgaac gacctgttcg tcaacatcaa ggtcgaccgc gaagaaagac ctgacatcga
     1441 ccagatctac atgaacgccc tgcatctcct aggcgagcag ggcggctggc cactgacgat
     1501 gtttctcacg ccgcacgcag agccggtgtg gggtggcaca tattttccga aggagtcgcg
     1561 tttcggccgt ccggccttcg ttgacgtgtt gcgcgaagtg gcacgcctat tccgtgagga
     1621 gccgaccagg atcgaacaaa accgtgctgc gctgctttcg cgtctggccg agaaggcgcg
     1681 tccagccggc aaagtgacga ttggattgaa tgaactcact gccatcgcaa tgcagatcgg
     1741 caatatgttc gattccgtta atggcggtct gcgcggcgcg ccaaaatttc cgcaaccggc
     1801 catcgtggag atgctgtggc gtgccggcct tcgcaccaac gacgtccgct ttttcgagac
     1861 ggtcgagcat tccctcgagc gcatgagcga gggcggcatt tacgatcacc ttgggggcgg
     1921 tttctctcgt tactcggtgg acgagatgtg gctcgtcccg catttcgaga agatgcttta
     1981 cgacaacgcg caattgcttg aattgctggc tttggcattt caacgcagcg gcaatcggtt
     2041 gttccgtcag cgcgcaggcg aaactgtcgg ttggcttgcg cgcgagatga cgacgcgcga
     2101 gggcgcgttc gcggcttcac tggatgccga ttcggaaggc gaggagggca agttttacgt
     2161 ttggtcttac caggaagtga taaaggcgct tggccttgaa gacggcgaat atttttctcg
     2221 ccactacgac gtgaaacccg gcggcaattt cgagggtcac agcatcctca atcggctcgc
     2281 cgaccttccc cgaaccgaag aggacgaaaa ccgtctagcg caccttcgcg ccaagctgtt
     2341 ggcggtacgc gacatgagag tgcggcccgg tctcgacgat aaggtattgg ccgattggaa
     2401 cgggctgatg attgcagcgc tggtcaatgc ggcaatcatt cttgacgagc cttcatggct
     2461 gaacatggcc aggcaggctt tcgctttcat cgaactgaac atgactagag gaaaccgact
     2521 tgggcattcc tggcgcgggc acaggttgtt gttcccaggc cttgcatccg actttgcgaa
     2581 catgattcgc gccgcattgg cactgcatga ggcgaccggc gagcgaattt acctcgaacg
     2641 agcgctcgaa tggcaggtgg cattcgattc gcactacatc gattcagaga ctggccgata
     2701 ttttctttcc gccgatgatg cttccgattt ggtgctacgt ccccattcga cccaggacga
     2761 tgccacgccc aatccaaatg cggtagccgc gcaaaatctt gtcaggctgg ctgcaatgac
     2821 aggggacaat aaatggcgcg agaaagccga catgctgatc gacggaattc tttcggcggc
     2881 cgaacgcaac ctattcggcc atgtggcatt gctcaatgcc ctcgatttgc ggctgcgggg
     2941 tgcggagatc gtagtgacag ggaaagaatc agaaccattc gtgcaagcgg cgttgaggct
     3001 gccatttgtt gagcgaattg tcctgcgcgc agtgagtcca acgaatctgc cggcgtcaca
     3061 cccggcacaa gagaaattaa aggtagcacc ggtaactgca gctttcgtat gcgttgggga
     3121 gcgctgctcg ctaccgctca tccacccggg cgatatcgcc gcctcggtgg cggcgatgcg
     3181 ctcttaatta gtcctccgaa agctttagga agatcgaagt tcgcctggcg tcgaagcagc
     3241 cggcgaacca ataagccgct ccccatgtga cattaaaatt aatgagccgc tccccccaat
     3301 cggccgacgc gcacccaagt tccggcggct ataatttgac cgctcgacct ctaattcagg
     3361 cgatcacctt cgccacagct acgggagcgg caaaaataca aggatttcga tcgcggggtc
     3421 gaacgtattc cgcacgtgat tgagcgcttc agcgtggatc gcgatccgaa aggtgcgatt
     3481 gcgtcattcc agcctaacgg gccgacattc accaagaaca atgccttctt caaggatatg
     3541 ggaaccaacg gcagaagctg tttcacctgc catcgcccgg agaatgcgtg gagcgtgagc
     3601 gcgaatgata tcgccgagcg attcgagaaa agcgcgggca ccgatcccat ttttcgtctg
     3661 gtcgatggcg cgacttgccc gagcgacgat gtctcgacgc tgcgggccag gcggcgggct
     3721 tacaagttat tgacagagaa gggtctgatc cgcgtcgggc tggccgttcc ggcagcagga
     3781 gaattcgtcg tcacggcaat cgacgatccc tactgctgca gcaccaaacc cgagaccggt
     3841 tcgggcgttt tatcgatgta ccgccgtccc atgccgacaa ccaatatcgc cttcctgagc
     3901 gcgatcatgt gggacggccg ggaacccgcg ctggagagcc aggccgtctc cgctacgctg
     3961 gtccacgcgc aggcaaagaa tgcacctacc cccgaacagg tggcgcagat cgtggccttc
     4021 cagaaaggca tcttcaccgc ccaaattttt gataacaggg cgaagttttt gaccggggac
     4081 aatgccagag gcggcccggt cgcgctctcg tcgcaggagt tctatatcgg aatcaacgac
     4141 ccgcttggcc ttaatcccaa gggcattccg tttacgccag aaatttttga tctgtaccgg
     4201 ccatggctca ccgcggggca gcgccacgat catgacggcc tcggtacgcc gatggcgaat
     4261 gtcagcgagc tcttcaggac cgttaacgtc acggatgact ggcgtcacaa cgatcatgag
     4321 cgcggcatgg tgaacgagca tcgtcgctcc gtggcgcgcg gagaagaggt gttcaacaaa
     4381 accaggatta acatcgccgg ggtttcggga ctcaacgatg agctcaaggt cgacagcatt
     4441 ccgggctcct gcggtatctg tcacgactca ccgaatatcg gcaaccattc ggtcaaggct
     4501 ccactcaaca ttggcgtccc cgatgccggc gataaaaagc cgcccgcgct ggacatttcc
     4561 gggctgcccg tgttcacgct gaaatgcacc aacgtccctg atggcgatcc gctcaagaat
     4621 aaagtctata aagtcaccga cccggggcgg gcgatgatgt ccggcaagtg caaggatatc
     4681 ggtaggttca agggtccgat ccttcgaggg ctggcagcac gcgctccctt tttccacaac
     4741 ggttcggcgg caacgttgcg ggacgtcgtc gacttctatg accagcgttt tggaattgga
     4801 tttacccgca aggagaaaac cgatctcgtc aatttcctga acacgctctg acgtcgatcc
     4861 tgattgcaaa ggaatggccg ggcaataccc ggccattttt ttgagagttc gaaaatccgg
     4921 cggcaattgg ccgacggcta tcacgtattc atgctctcga agaattcaga gttgctcttg
     4981 gtattgcgca gcttgtcgag caggaagtcg attgcatcca tcgttcccat cggattgagg
     5041 atgcggcgca gcacgtacat tttcttcagg atcgcagggt cagtcagcag ctcttccttg
     5101 cgggtgcctg aacgcgtgat gtcgattgcc gggaatgtgc gcttgtcggc gaccttccga
     5161 tcgaggatga gctcggagtt acccgtgccc ttgaattctt cgaaaatcac ttcatccatg
     5221 cggctgccgg tatcgatcag tgcagtcgcg atgatggtga gagagccgcc ttcctcgatg
     5281 ttgcgcgcgg cgccgaagaa gcgttttggg cgctgaagcg catttgcgtc gacaccgccg
     5341 gtcaacacct tgccggagga gggaacgacc gtgttgtagg cacggcccag acgggtgatc
     5401 gaatcgagca atatgacgac gtcgcgctga tgctcgacca ggcgtttagc cttctcgatg
     5461 accatctccg cgacctggac gtggcgcgaa gcaggctcat cgaaggtgga agatatgact
     5521 tcgcccttaa ccgagcgctg catgtcggtg acttcctccg gccgctcatc gatgagcaac
     5581 acgatcaggt aggtctccgg gtgattggcc gtgatcgagt gggcgatgtt ctgtaacagc
     5641 accgtcttgc cggtgcgcgg aggcgacacg atcagtgcgc gttggccctt gccgatagga
     5701 gcgacgatat caatcacgcg tgccgagaga tctttcttgg ttggatcctc gtattccatc
     5761 ttgagccgct cgtcgggata gagcggcgtc aggttgtcga agttgatctt
//
LOCUS       DATDHO010000588         3733 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_128178, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000588 DATDHO010000000
VERSION     DATDHO010000588.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3733
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128178"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..690
                     /locus_tag="VIY07_11265"
     CDS             <1..690
                     /locus_tag="VIY07_11265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382368.1"
                     /translation="ANVSCACHWTVNVAASNGHGKMYTDVYSVAPAGIFVAPDSKITD
                     PSGLAGVPVSVGYQSGSHYSTVQALEQYLKPEQINLVYSDGMLFARMEKLFEGKAPAV
                     HLFGGPYYFAEQLGFRKVIDATFMIGTMIHGDPDPEDLRKFFRALRKAQRDIDLRPEL
                     YTHYYKKEFPDRFHAKMDTRRWGPGERLVFEPYTKEVYEESFEWIAAHGIFPEGKMGS
                     SRYEQATLSLG"
     gene            831..1997
                     /locus_tag="VIY07_11270"
     CDS             831..1997
                     /locus_tag="VIY07_11270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382369.1"
                     /translation="MKRVLFAGAVLAAAMLPAAVSAQETIKIGVITAFSGQFADPSAQ
                     IDNGIKLYMKQHGDKVAGKKIEIIRKDTGGPNPDVAKRLAQELIVRDKADILTGFALT
                     PEALGAASVADEAKKLMVVMNAATAVITEKSPYIARVSLTLPMIGETLGTWAVKKGGV
                     KKVYTMVTDYGPGLDAEAAFQRAFKAAGGEVIGSVRMPIANPDFSAFVQRAKDLNPES
                     IFVFIPGGAQPAALGKAFAERGMDPKKIKLLSTGEPVDETAIKSLGDLALGRLSAWHY
                     DYNHKSKMNADFVKAFNAEYKRNPDFFAVGGYDGMHLIYEALKKTGGKTDGDALIAAA
                     KGMKWESPRGPISIDPATRDIVQNVYIRRVEKVGNDIVNVEFETIPNVKDPTHK"
     gene            2192..3052
                     /locus_tag="VIY07_11275"
     CDS             2192..3052
                     /locus_tag="VIY07_11275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382370.1"
                     /translation="MLPIFGVLFDGLAYGMLLFVLSVGLSVTLGLMNFVNLAHCAFAM
                     IGGYVTVTLVNEFQWHFLATLPVAFAAAAVVSVVLERTLYRRLYRASDLDQVLLTIGL
                     AFISVAVAAYIFGTTQQPVETPAQLRGGIDFFGLGFGKYRLFLIGIALVVTLLLVAGL
                     EYTRFGAQVRAAVDNQRMARGLGIDVDRTFAATFALGSGLAGLGGALAIEIVGLDPNF
                     AFTYLVYVLIIVSVGGLGSIAGSFAAAILIGVSDVAGKYYAPELGAFLIYLVMVVVLM
                     WRPAGLFGRR"
     gene            3176..>3733
                     /locus_tag="VIY07_11280"
     CDS             3176..>3733
                     /locus_tag="VIY07_11280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019997212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382371.1"
                     /translation="MSSKTAALTPQAYLQAQSRWHPLEIAFWLATLLPFFLFPNYLSL
                     ASQIAITALFALSLDIILGYAGIVSLGHAAFFGIGAYSAGLISKFGWGEPLTGLVLSA
                     AIAGIVGYAVSFIISRFRHFTLIMITVGLGLLAFEAANRAHWLTGGSDGLQGISMWPV
                     LGLFRFDLYGYTAYTYSLVVLFVVFL"
BASE COUNT          718 a         1121 c         1113 g          781 t
ORIGIN      
        1 gcaaacgtca gctgtgcctg ccactggacc gtgaacgtcg ctgcgtcgaa tggacacggc
       61 aagatgtaca ccgacgtcta ctcggtggcg ccggcaggca tctttgtcgc ccccgattca
      121 aagataacgg atccgtccgg ccttgccgga gttccggttt cggtcggcta tcagtccggc
      181 agtcactatt ccacggtgca ggcgctggag cagtatctca agccggagca gatcaacctc
      241 gtctactccg atggcatgct gttcgcgcgc atggagaagc tgttcgaggg caaggcgccg
      301 gccgtgcacc tgttcggcgg cccctattac ttcgccgagc agctcggctt ccgcaaggtg
      361 atcgacgcca ccttcatgat cggcaccatg atccacggcg atcccgaccc ggaagatctg
      421 cgcaagttct tccgcgcctt gcgcaaggcc cagcgcgaca tcgacctgcg gccggagctc
      481 tacacccatt attacaagaa ggagtttcct gaccgcttcc acgccaagat ggatacccgg
      541 cgctgggggc ccggtgaacg cctggttttc gagccgtaca ccaaggaagt ctatgaggaa
      601 tcgttcgagt ggattgctgc ccacggcatt ttcccggaag gaaagatggg cagctcccga
      661 tacgagcagg cgaccttgtc gctgggctaa gggggtgcgg cacaaagacc gctcgttccc
      721 gagccaaaga aaagcgccgc gaaccaaggg ttcgcggcgc ttttctttgc atgaaagcta
      781 aggcattcta gcgccaacaa caccaagcaa gctttcaggg gaggaacatc atgaaacgcg
      841 tgttattcgc cggcgcagtg ctggcggcgg ccatgctgcc ggccgcggtc agtgctcagg
      901 aaacgatcaa gatcggcgtc atcactgcct tttcaggcca gttcgccgat ccgtcggctc
      961 agatcgacaa tggcatcaag ctctatatga agcagcacgg cgacaaggtc gccgggaaga
     1021 agatcgagat catccgcaaa gataccggtg gtccgaatcc agacgtcgcc aagcgccttg
     1081 cacaggaact catcgtccgc gacaaggccg atattctcac tggatttgcg ctgacgcccg
     1141 aagcgctcgg tgcggcgagc gtggccgatg aagccaaaaa gctgatggtc gtcatgaatg
     1201 cggcgacggc agtcattacc gagaaatccc cgtacatagc ccgagtgtcg ctgacgttgc
     1261 ccatgatcgg tgaaaccctg ggcacctggg cggtcaagaa gggcggggtg aaaaaagtct
     1321 ataccatggt caccgactac ggccccggtc ttgacgccga ggctgcattc cagcgcgcat
     1381 tcaaggcggc aggcggcgag gtcatcggat cggtgcgcat gccgatcgcc aatccggatt
     1441 tttcggcctt cgttcagcgc gccaaggacc tcaatccgga atcgatcttc gtgttcattc
     1501 cgggcggcgc acaaccggca gctctcggaa aagctttcgc cgaacgcggc atggatccaa
     1561 agaaaatcaa gctcttgagc accggcgaac cggtggacga aactgccatc aagagcctcg
     1621 gcgacctcgc gcttggacgc ctgagcgcat ggcactacga ctacaatcac aaatcaaaga
     1681 tgaatgcgga cttcgtgaag gccttcaacg ccgagtacaa gcgcaatccc gatttctttg
     1741 ccgtcggcgg ctatgatggc atgcacctga tttacgaagc gctgaagaag acaggcggca
     1801 agacggatgg cgatgccctg attgcggctg ccaaggggat gaagtgggag agcccgcgcg
     1861 gaccgatctc gattgatccg gcgacccgcg acatagttca gaatgtctac atccgccggg
     1921 tagaaaaagt cggcaacgac attgtcaatg tcgagtttga gacaatcccg aacgtgaaag
     1981 atccgacgca caagtaggcc ggtgccctga ggcgcttatg aacttccgga tggggcgatc
     2041 aaaataggat cgccccattt cgcaatcgcg gcacagtcca cactgttcag tcccgcgcaa
     2101 gcgggaattg agagaaattg ggttataagg tttgaccctg ggtccccgcc tcagcgggga
     2161 cgaacgactg aatcaaggtc atcggcattt catgcttccg attttcggtg tcctgttcga
     2221 cggcctcgct tacggcatgt tgctgttcgt gctgtcggtc ggattgtcgg tgacgctcgg
     2281 cttgatgaac ttcgtcaacc tcgcgcattg cgctttcgcg atgatcggcg gctacgtcac
     2341 cgtcacgctg gtgaacgaat ttcagtggca tttcctcgcg acattgccgg tggccttcgc
     2401 agccgcggcg gtggtgagcg tcgtgctcga acgcacgcta taccgcaggc tttatcgggc
     2461 gagcgatctg gaccaggtgc tgctcaccat cgggctcgca tttatttcgg tggccgtcgc
     2521 cgcctatatc ttcggcacca cccagcagcc ggtcgaaacc ccggctcagc tgcgcggcgg
     2581 catcgacttt ttcggcctgg gcttcggcaa gtatcgcctg ttcctgatcg gcattgcgct
     2641 cgtcgtcacc ctgttgctcg tggcgggtct cgaatacacg cggttcgggg cgcaggttcg
     2701 cgccgcagtc gacaatcagc gcatggcacg aggcctgggc atcgacgtcg accgcacctt
     2761 cgccgcgacc ttcgcgctcg gctccgggct cgccggcctc ggcggcgcgc tcgcaatcga
     2821 gattgtgggt ctcgatccga atttcgcctt cacctacctg gtctatgtgc tgatcattgt
     2881 ttcggtcggc ggactgggct cgattgccgg ctcgtttgcc gccgcgattc tgatcggcgt
     2941 cagcgatgtg gccggcaaat actatgcgcc cgaactgggc gcttttctca tctatctggt
     3001 catggtggtg gtgctgatgt ggcgtcccgc cggcctgttc gggaggcggt gagatgtggg
     3061 tcgcgctgac gagcctctca atcgaacgga gaatgattga ccgtcgcgcc acatcctcaa
     3121 cgtcatggcc gaacgggcat aacgacagaa gtccccgcga atcgggcgct ggacaatgag
     3181 ttcgaaaacc gcagcactta ctccacaggc atacctgcag gcgcaaagcc gctggcatcc
     3241 gctggagatt gcgttctggc tcgcgacgct gctgccgttc ttcctgtttc cgaactatct
     3301 gtcgctggca agccagatcg ccatcaccgc gttgtttgcg ctctcgctcg atatcattct
     3361 cggctatgcc ggcatcgttt cgctcggcca tgcagccttt ttcggcatcg gcgcctatag
     3421 cgccggactg atctccaaat tcggctgggg tgagccgctg accggccttg ttctatcggc
     3481 agcgatcgcc ggaattgtcg gctatgcggt gagcttcatc atctcacggt ttcgccactt
     3541 caccttgatc atgatcacgg tcgggcttgg cctgctcgcg ttcgaggcgg cgaaccgcgc
     3601 gcattggctt accggcggca gcgacgggct gcagggcatc tcgatgtggc cggtgctcgg
     3661 cctgttcagg ttcgatctct atggctacac cgcctacacc tattctctgg tggtgctttt
     3721 cgtcgttttc ctc
//
LOCUS       DATDHO010000589         2003 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_425159, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000589 DATDHO010000000
VERSION     DATDHO010000589.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425159"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(395..1396)
                     /locus_tag="VIY07_11285"
     CDS             complement(395..1396)
                     /locus_tag="VIY07_11285"
                     /inference="COORDINATES: protein motif:HMM:NF014796.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-Mn family superoxide dismutase"
                     /protein_id="HEY6382372.1"
                     /translation="MRYKLAPIFCRPWLLNGLSTKLIETHYEKNYGGALRRLNAITEK
                     LASLDFAKTPGYVINGLKREEQAALNSMLLHELYFASLGVAPVAKGRNIPRPAGALAE
                     ALARDFGSFERWRDEFDAMGNTLAGGSGWVLLVHLPRDGRLINQYASEQTQGIAGSIP
                     LLALDMYEHAYHIDFGGNARAYIDAFVKNIDWKAAQDRHEDAVKVAPPRPLVQEEFGD
                     LPGVDVEEVKAMLEAGKPVQIIDARPRHSMSRQQDIMDGAIWRDPDRVQEWAGELSKS
                     DPVVVFCVYGFHVGCKTAISLREAGFDAKYMKGGHSAWKAIGGAIKPIAEESQENEV"
     gene            complement(1622..>2003)
                     /locus_tag="VIY07_11290"
     CDS             complement(1622..>2003)
                     /locus_tag="VIY07_11290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017677027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HEY6382373.1"
                     /translation="IKRFVDPQAEFLYVPTDQVMDVAKREGAIPFDVANVELGHHGLE
                     CSFDAVIKKYKLTDPALQRLALIVRGADTDAKDLTPQSRGLDAIAEGFRLVYQDDHEL
                     LEREMSVYDALYAYCRQTSGRPNS"
BASE COUNT          377 a          607 c          580 g          439 t
ORIGIN      
        1 taatgacgaa cacgggcgca gtggagaaat ccaaagattc caactgagca gtgattgcat
       61 tgagacgttt cactgcaccg ttgtagttgt tttcgtaatg actgacgatg agtttttcag
      121 agaatccttt tagctttgcc gggttacacg agagcagctt catctcgtat gtcatggcgt
      181 gtgccctcct tcaagacttt ggcagtaggc atagagcgcg tcgtagaagt agctagagca
      241 aagatcccac actcctgtag cactgcctgc ttgcggtgcc gagcgcggtc atcccggcta
      301 aatccaacta cctgctcaac ccattgcacc gggatttccg gcgaatccga gtcggcaagc
      361 ctgagagatt tgaaaccgac ctgcggcggc gtgcctacac ttcattctct tgcgattcct
      421 ccgcgatggg cttgattgcg cctccgatcg ctttccacgc cgagtggccg cccttcatgt
      481 acttcgcgtc gaagccggct tcccgcagcg agattgcggt cttgcacccg acgtgaaagc
      541 cgtatacgca gaacacgacc accgggtcgg atttcgagag ctcgccggcc cattcctgca
      601 cgcggtccgg gtcgcgccag attgcaccgt ccatgatgtc ctgctggcgc gacatggagt
      661 gccgcgggcg agcgtcgatg atctgcactg gcttgccggc ctcgagcatc gccttgacct
      721 cctctacgtc cacgccgggc aggtcgccga attcctcctg caccagcggt cgcggcggtg
      781 cgactttgac ggcatcctcg tgtcggtctt gtgccgcctt ccagtcgatg tttttgacaa
      841 acgcatcgat gtaggcccgc gcgttcccac cgaagtcgat gtggtacgcg tgctcgtaca
      901 tgtcgagcgc gaggagggga atgctgcccg cgatgccctg cgtctgctcc gaggcatact
      961 ggttgatcaa ccgtccatcg cgcgggaggt ggacgagcag cacccatccg gagccgcccg
     1021 caagcgtgtt gcccatggcg tcgaactcgt cgcgccagcg ctcgaacgag ccgaagtcgc
     1081 gcgccagcgc ttcggcgagc gcccccgccg gccggggaat attgcggccc ttggcgaccg
     1141 gggccacgcc caggctcgcg aaatacagct cgtgcagcag catggaattg agcgcggcct
     1201 gttcctcgcg cttcaggccg ttgatcacgt agcccggcgt cttcgcgaag tcgagggacg
     1261 cgagcttttc cgtgatcgcg ttgaggcgcc ggagcgcccc gccatagttc ttttcgtagt
     1321 gggtttcgat cagcttcgtc gataacccgt tcaggagcca gggacggcag aaaatgggtg
     1381 cgagtttata gcgcatgact atacctccat atcggtttcg atccacaaaa tcgcctgaca
     1441 gaggcgacgc ctgccgcttg gtcggaagat gtgcctccct cgatccagcg aagtaccgcg
     1501 gtcgcacctg ggcgacgcgc aagacctctg ggtggatggc ctcgccagtc gaagggtctc
     1561 atcgagtgtg taagctgatc aggcatagat tcctccatga cttgatctct tctaactttt
     1621 gttaactgtt cgggcgaccg ctggtttgac gacagtaggc gtacagcgca tcgtagacgg
     1681 acatctcccg ctccagcaat tcgtggtcgt cctggtagac aagccgaaac ccttcagcaa
     1741 tcgcatcgag gccgcgcgac tgtggcgtca ggtctttggc gtctgtatcg gctcctctca
     1801 cgatcaaggc aagccgctgc agtgcgggat cggtgagctt gtactttttg atgacggcgt
     1861 cgaaactgca ttcaagccca tgatggccta attccacatt cgccacatcg aacggaattg
     1921 cgccctcgcg ctttgctacg tccatcactt gatccgttgg cacataaaga aactcagcct
     1981 ggggatcaac gaaccgtttg atc
//
LOCUS       DATDHO010000590         2473 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_375321, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000590 DATDHO010000000
VERSION     DATDHO010000590.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2473)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2473)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2473
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375321"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..185
                     /locus_tag="VIY07_11295"
     CDS             <1..185
                     /locus_tag="VIY07_11295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YidE/YbjL duplication"
                     /protein_id="HEY6382374.1"
                     /translation="LVGVASGATGNPAILVYSTRMAPTERPDIGYAMIFPSMTILKVI
                     AIQIVGLLVAAGAIAG"
     gene            259..432
                     /locus_tag="VIY07_11300"
     CDS             259..432
                     /locus_tag="VIY07_11300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382375.1"
                     /translation="MKKQSPENSINSPQLITFDAIMPSTMAVRAEESGVKRATTDPMT
                     LFALSGAAKVISG"
     gene            complement(419..1606)
                     /locus_tag="VIY07_11305"
     CDS             complement(419..1606)
                     /locus_tag="VIY07_11305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018012759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEY6382376.1"
                     /translation="MLLWFGALMLRAGNTAIRTREWIEVVARKMGFDAVSISLSLDSI
                     TASVRCSGERATAVREIGPPAINASRIAELEQLARKGPASAPHEIAARLAEIESTAHH
                     YSSVQVAAAVGLASAAFAFLNGAAAIEMSAAAIGGGIGQWVRSWLSRRHLNQYGTAAL
                     SAMAASGLYVMAAALARRAGFDFLHYPSGFIASVLFLIPGFPLLAALFDLLQHQTVAA
                     VSRMAYGVMMLLAVALGLSIVIAVAGVDITRQPSLELAYPLKLLLRAIASFVAACAFA
                     MLFNTPVRTVLAVGLLAVVANGLRLILIDMGMMLAPAAFFAAFVVGLVALVIDGRFNV
                     PRMAMTVAPIVIMIPGIYAFEMIVLFNHGQMLDALQASAACGFVVGALAMGLATARFF
                     SPR"
     gene            1868..>2473
                     /locus_tag="VIY07_11310"
     CDS             1868..>2473
                     /locus_tag="VIY07_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HEY6382377.1"
                     /translation="MASCRVAVLILALFIWVPVAAIAQTPAAPTTPAATSPATDQLLK
                     PEQLDALVAPIALYPDNLLSLVLMASTYPLEVVQADRWVREHKNLKGEQQKTEVDKQA
                     WDESVKSLVATPDVLSMMSKKLDWTLKLGDAVLAQQADVMDAIQRLRTKAEANNKLTS
                     TKQQTVTKRQEQGRQVIYIEPTNPETIYVPYYDPAVVYGAWP"
BASE COUNT          588 a          701 c          721 g          463 t
ORIGIN      
        1 acctggttgg cgttgcatcc ggggcgaccg ggaaccccgc cattcttgtg tattcgacgc
       61 gaatggcacc gaccgaacgg cccgacatcg ggtatgcgat gattttcccg tcgatgacca
      121 tcttgaaagt catcgccata cagattgtcg gcctgctcgt cgcagcaggg gcaatcgccg
      181 gctgagtttg atctcaacgg gatgattggc cgcgaagggc gcggagggac ctcgttgttt
      241 tgagggcttg gggatgccat gaaaaagcaa tcgcctgaaa actcgatcaa ttccccgcag
      301 ctgattacgt ttgacgcgat catgccgtca acaatggctg ttcgcgccga agaaagcggc
      361 gtgaagagag ctaccaccga tccgatgacc ctgtttgcgc tcagtggggc cgcgaaagtc
      421 atctcgggct gaaaaaacgg gctgttgcaa ggcccattgc cagcgcgccg acaacgaagc
      481 cgcacgcagc cgatgcctga agtgcgtcga gcatttgtcc atgattgaac aacacgatca
      541 tctcgaatgc atatatgcca ggaatcatga ttactatcgg ggccactgtc atcgccatgc
      601 gcggcacgtt gaagcgtcca tcgatcacaa gggccactag tccgacaacg aacgcggcaa
      661 aaaatgctgc gggggctagc atcatgccca tgtcgatcaa gatcaggcgc aggccattcg
      721 caactacagc caaaaggccc accgcaagga ccgtacgcac gggtgtgttg aataacatcg
      781 caaacgcgca ggctgcaacg aaacttgcaa tcgcccgcag cagcagcttg agtggatagg
      841 caagttcgag cgaaggctgc cgtgtaatgt cgacaccggc aaccgcgatc acaatactga
      901 gacccaaggc caccgccagc agcatcatga cgccataagc catacggctc acggcagcta
      961 cggtctggtg ctgcaacagg tcaaacaagg cagcgagcag cggaaaaccc ggaattaaaa
     1021 aaagtaccga agcaatgaat ccggacgggt agtgcaggaa atcgaagccg gcgcgccgtg
     1081 ccagggccgc agccataaca tacaaccccg acgcagccat cgctgacaac gcggcggtcc
     1141 catactgatt gaggtggcga cgggagagcc atgaccgcac ccactggccg attccgccgc
     1201 cgattgccgc tgcagacatt tctatcgctg cggcgccgtt gagaaatgcg aaggcggcgc
     1261 ttgctaggcc gacggctgcg gcaacctgca cactggaata gtgatgcgcg gtggactcga
     1321 tttccgcaag cctggcggcg atttcgtgcg gtgcggatgc gggccccttt cttgcaagct
     1381 gctccagttc ggcgatgcgc gacgcattga ttgccggggg tccgatctcg cgcactgccg
     1441 tggcccgttc cccggagcac cggacgctgg cagttatgct gtcaagtgat aggcttatcg
     1501 aaactgcgtc gaagcccatc ttgcgcgcca ctacttcgat ccattcgcgt gttcgaatcg
     1561 cggtattgcc cgcgcgcagc atcaaggcgc cgaaccatag caacacgtcc agggcctcac
     1621 cgagtgaggc ggaagtggtt cggtttaacc ggtctaaaga tgaagtcacg ggaaaaccca
     1681 atcagatcac acggtcctag cgatgaagaa atagtgcaca gagtgtcacg ctttcgaata
     1741 gcgaatagca agccaccagt ttgaaggaac gggttcgctt aatcggagcc gccttgatcc
     1801 agatcaaacc gataacgaat tttagctgaa atactgaccg tctgtgttct ctacgctggg
     1861 gaggagtatg gcttcttgtc gggtcgcggt actgattttg gcacttttca tttgggtgcc
     1921 ggttgcggcg atcgcccaaa ctccagccgc tccgactact ccggcggcga ccagcccggc
     1981 gaccgaccag ctcctcaaac ccgaacagct cgatgcgctt gtggctccga ttgcgctgta
     2041 ccctgacaac ctgctttcgc tggtgctgat ggcatcgacc tatccgctgg aggttgtgca
     2101 ggccgatcgc tgggtgagag agcacaagaa tttgaagggc gagcaacaaa agaccgaggt
     2161 ggacaaacag gcctgggatg aaagcgtaaa atcactggtc gccacgccgg atgtcctttc
     2221 aatgatgagc aaaaagctcg attggacgtt gaaactcggc gatgcggtgc ttgcgcagca
     2281 agcggatgtc atggacgcca ttcagcgcct gcgtacgaag gccgaggcca ataacaagct
     2341 gacttcgacg aagcagcaga cggtcaccaa gagacaagag cagggtaggc aagttatcta
     2401 cattgagcca acgaaccccg aaacgatcta tgtgccgtat tacgatccgg ccgttgtcta
     2461 cggtgcttgg ccc
//
LOCUS       DATDHO010000591         4008 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_326167, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000591 DATDHO010000000
VERSION     DATDHO010000591.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4008
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326167"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..569
                     /locus_tag="VIY07_11315"
     CDS             <1..569
                     /locus_tag="VIY07_11315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GcrA family cell cycle regulator"
                     /protein_id="HEY6382378.1"
                     /translation="TGHEANMTDIEVPSKSLSMTWTAERVALLRNYANAGLSCAQIAA
                     EIGVTRNAVIGKLNRLGLSRGRSGPGPRAATVRRHQTRPQVLAQRLALKAVFASEPIA
                     DNVVSAEPCSLLNLAPRKCRWPISVAEKSDLNFCNNIAAEGWSYCAGHARMAYRLSPQ
                     RAHRLLPAAKASVQSCMASETLAANSDF"
     gene            complement(566..904)
                     /locus_tag="VIY07_11320"
     CDS             complement(566..904)
                     /locus_tag="VIY07_11320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382379.1"
                     /translation="MRMPVLRYFLVVGLVLFGLLMLVNSKTESSGPAVKTAQTVGLPQ
                     SVKLQPEPPPQVTAVNFAAEQEPPQAKPVEPVNAPKAVEKKRKEKTARKHRQTWHRYV
                     QYQFSPFSIR"
     gene            complement(1061..1546)
                     /locus_tag="VIY07_11325"
     CDS             complement(1061..1546)
                     /locus_tag="VIY07_11325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382380.1"
                     /translation="MQIHKNHRGHQSEPHDGSHAFVLVEERQPPPRIELARERMLMCR
                     LYIGLIKTLNEDYGAAFGSPSDSAASRTIGIYVFLCTMMCTPVSASKIANALKLPRVT
                     VVRRLQEMVKHGFIERVGNAYRVTDKVNLPDLKTRLQRRIDMIVETGKKLSELEHQRA
                     A"
     gene            complement(1637..2740)
                     /locus_tag="VIY07_11330"
     CDS             complement(1637..2740)
                     /locus_tag="VIY07_11330"
                     /inference="COORDINATES: protein motif:HMM:NF017853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF937 domain-containing protein"
                     /protein_id="HEY6382381.1"
                     /translation="MATNLVSVIMKFLTPDMIGRIASALGLDRNDASSAVAAGVPALL
                     AAFAGVAARPGGPQKLADAAKQEINTLDKLPGMVGAAGQTVAERGTKMLSSLLGSRDQ
                     TALESAIGKYSGIGSGASSSLLGALAPVVMGAIAQQQGSRGLDGSSIANLLESQKDNI
                     VDSIPSGFGRMLGGTGLIDSLGDSAKKAIMAGGETTRAAAASVARTIDDTRRSAVTAA
                     PTSSNWLLWIIPALAIAALLIYLLGRPTEQVVQQGVSAVQSLNVAGIDLGKQATDSIS
                     SLRTALSGISDPASAQAALPKLQLATAQIDKVSGMVGQLSDTQRKTLAGLVTPVMPAL
                     NQLFDKVLAIPGVAEIIKPTIDSLKTKLATLTA"
     gene            complement(2961..3356)
                     /locus_tag="VIY07_11335"
     CDS             complement(2961..3356)
                     /locus_tag="VIY07_11335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382382.1"
                     /translation="MPARVSSRRRWFLRDVPRTYVLFVWLAFGLAIFLYAYDWRPSGW
                     SVLRQQEAAAMPQRRGVEHYTGSIVIVPARGDFCWQRMIDNRTGKMWDKGYVNCYEAV
                     SPMDKDQRVGMSSARINAIGRAFNHISDN"
     gene            3611..>4008
                     /locus_tag="VIY07_11340"
     CDS             3611..>4008
                     /locus_tag="VIY07_11340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6382383.1"
                     /translation="MHRTSAFVSRAALGAACLTLTLAGQAGAADYPARQPHIIVGYPA
                     GGSTDIVARLFGDWFGKRLGQQFIVENRPGAGNNIATEAVVKAPPDGYTIILVNPANA
                     INASLYKNLNFNFLRDIDPIAGVIRVPNVM"
BASE COUNT          771 a         1192 c         1197 g          848 t
ORIGIN      
        1 caaccggtca cgaggccaac atgaccgata tcgaagttcc cagcaaaagt ttgagtatga
       61 cctggaccgc ggaacgcgtg gctcttctca ggaactacgc caatgccggc ctgtcctgcg
      121 cacaaatcgc tgccgagatt ggagtgaccc gcaacgccgt cataggcaag ctgaaccggc
      181 tcggcctctc gcgcggcagg agcgggccgg gaccgcgcgc ggccactgtg cggcggcacc
      241 agacgcgacc acaggtgctg gcgcagcggc tggcgctcaa agcagtgttc gcctccgagc
      301 ccatcgcgga taatgtggtg agcgccgagc cgtgttcatt gctcaacctc gcgccgcgca
      361 aatgtcgctg gcccatcagc gttgcggaga agtctgactt gaatttctgc aacaacatcg
      421 ctgcagaggg ttggtcctat tgcgcgggtc acgcgcgcat ggcgtaccgt ctttcaccgc
      481 agcgtgctca ccgattgctt ccagccgcta aggcatccgt ccaaagctgc atggcgtcag
      541 aaacgctggc agcgaattcg gacttctagc gaatgctgaa tgggctgaac tgatattgaa
      601 cgtagcggtg ccatgtttgc cgatgtttgc gagcggtttt ttccttgcgt ttcttttcga
      661 cagccttcgg cgcgtttacg ggttcaaccg gttttgcttg tggaggctct tgctcggcgg
      721 cgaaattgac ggcagtcacc tgcggcggcg gctcgggttg caacttgacc gactgcggga
      781 ggccgaccgt ttgcgctgtc ttgaccgccg ggccactgga ctcggtcttg ctgtttacca
      841 gcatcagcaa tccgaagagg accagcccaa caacaagaaa atagcgcaaa accggcattc
      901 gcatctgcgt tttccatcgg tggcaattgc gattgaggcc ggaagtatta gtccgcggct
      961 gttggcgctc tattgtacgt gcgtacgcgc tctccatcga aagggatggc ttgcctatac
     1021 aaacggttaa tgccgttgaa atctgatgcg gcgattgaaa tcaggcggcc cgttggtgct
     1081 ctaattcgga caatttcttt ccagtttcca caatcatgtc tattcgtcgc tgcagcctgg
     1141 tcttcaggtc gggaaggttc accttgtcgg taacgcgata agcattgccc actctttcga
     1201 taaagccgtg cttcaccatc tcttgcagcc gtctgaccac ggtcacgcgt ggcaatttca
     1261 gcgcgtttgc gatcttgctc gcgctcaccg gcgtgcacat catcgtgcag agaaaaacat
     1321 aaatgccgat agtccgcgac gctgcgctgt cgcttgggga gccaaatgcg gcgccgtaat
     1381 cttcgttcag ggtcttgatc aagccaatat agaggcgaca catgagcatg cgctcgcgcg
     1441 ccagttcgat gcgcggcggc ggctgtcgtt cctcgacaag gacaaaggca tgtgaaccgt
     1501 cgtgcggttc gctctggtgt ccccgatggt tcttgtgaat ttgcatgggc attgctccgg
     1561 ccccgggtga agttgcgtcg gcatgctgca tccaccgtcg gcacaggccg acggtggatg
     1621 ccaatgattg caagcttcaa gcggtcaatg ttgcgagctt cgtcttcagc gagtcaatcg
     1681 tgggctttat gatctcggcc acgcccggaa tagccagcac cttgtcgaac agctggttga
     1741 gcgccggcat gaccggagtg accaatccgg cgagtgtctt gcgctgcgtg tccgacaatt
     1801 gcccgaccat cccgctgacc ttgtcgatct gagccgtggc caactgcagt tttggcagtg
     1861 ccgcctgcgc tgaagcggga tcgctaatcc cgctgagtgc cgtacgcagg ctgctgatgc
     1921 tgtcggtggc ctgcttgccg agatcgattc cagcgacgtt caggctttgc acggcgctga
     1981 cgccctgctg aacgacctgc tccgtcggcc ggccgagcag gtagatgagc aacgccgcaa
     2041 tcgccagcgc ggggatgatc cagagaagcc agttgctcga agttggagct gcagtgacgg
     2101 cggagcgccg cgtatcatcg atcgtccgcg cgaccgaggc ggcagcagcc cgtgtggttt
     2161 cgccgcctgc cataatcgcc ttctttgcgg aatctcccag cgagtcgatg aggcctgtac
     2221 cgccgagcat tcgaccgaag ccggacggaa tggaatcgac gatgttatct ttctggctct
     2281 cgagaagatt cgcgatgctg cttccgtcga gtccgcggct gccttgctgc tgggcgatcg
     2341 cgcccatgac aaccggagcc aatgcaccga gcaatgaact gctcgctccc gagcctattc
     2401 cggaatattt cccaatcgcg ctttcaagtg cggtctggtc ccggctgcca aggagcgacg
     2461 agagcatctt tgttccgcgc tcggcaactg tctgtcccgc ggcaccaacc atcccgggca
     2521 atttgtcgag cgtattgatc tcttgcttcg cagcatcggc aagtttttgc ggaccgccgg
     2581 gtctggcagc gacgccggcg aaggcagcca gcagcgccgg aacgcctgcc gcgacagcgg
     2641 aggatgcatc gttgcgatca aggccgagcg cgcttgcgat gcggccgatc atgtcgggtg
     2701 tcagaaattt catgataact gatacgaggt tcgtggccat gcttttgctc ccgcattcgt
     2761 gactgaatga gattctcgtc cgcaaaggac gcgagtcgag atggaccttg gcccatctcg
     2821 acagacttgg ttggggtatc gctgctcagt gcccgcgctc aattgtcttt gcgtaagcag
     2881 cgcttatcgg aatgggcacg acgcctatac gaacgtgtcg gcttactcag gtaggcctga
     2941 ggtatcggag tggctggtgc ctagttatcg ctgatgtgat tgaacgcccg gccgatcgcg
     3001 ttgatgcgcg ccgaactcat gcccacgcgc tgatctttgt ccatcgggga gacagcttcg
     3061 tagcaattga cgtagccctt atcccacatt tttccggtgc ggttgtcgat catccgctgc
     3121 cagcagaaat cgccccgcgc cggcacgatg acgatcgagc cggtgtaatg ctcaacgccc
     3181 cgccgctgcg gcattgccgc cgcctcctgc tgtcggagca ccgaccagcc gctcgggcgc
     3241 cagtcatagg cgtatagaaa tatcgcgagg ccgaaggcca gccagacaaa cagcacgtag
     3301 gttcgcggaa catcgcgcaa gaaccaacgt cggcgggacg acacgcgcgc gggcataaca
     3361 atgactccgg acaccatcgg gaatctaggg cgatcatcgt taagagatcg ttcagatttg
     3421 gtcgcgtgac ggttgcgctc agggtgcgtt ttgatgcgtc aaatcagaca tttgggcggc
     3481 cccggctgcc ggaaaaatgt cgttggcggc aaaacggcct ctcttgcacg atccctcccg
     3541 cgccgcgtaa cgtcggcgcc ggaaaacagt ccaacggcaa aaaggccgac cagacgggag
     3601 gatcacagat atgcaccgga cttcggcatt cgtttcacga gccgcccttg gggcggcttg
     3661 ccttacgctt acactggctg gtcaagcagg tgccgccgac tacccggcgc ggcagccgca
     3721 tatcattgtc ggctatcccg ccggcggctc gaccgacatt gtggcgaggc tattcggcga
     3781 ttggttcggc aaacggctcg gtcagcagtt catcgtcgag aacaggcccg gcgccggcaa
     3841 caacatcgcg accgaagccg tggtcaaagc accgcccgat ggctacacga ttattctggt
     3901 caatcccgcg aatgccatta atgcttcgct ctacaagaat ctgaatttca acttcttgcg
     3961 cgacatcgac ccgatcgccg gcgtcatccg cgtgccgaac gtgatgga
//
LOCUS       DATDHO010000592         4051 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_128290, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000592 DATDHO010000000
VERSION     DATDHO010000592.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4051)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4051)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4051
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128290"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            135..3239
                     /gene="addB"
                     /locus_tag="VIY07_11345"
     CDS             135..3239
                     /gene="addB"
                     /locus_tag="VIY07_11345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000724 - double-strand break repair via
                     homologous recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="double-strand break repair protein AddB"
                     /protein_id="HEY6382384.1"
                     /translation="MPATKPRVFNIPASAPFLPELTVALRRGELVPGFPASKDPLELA
                     RATLYLPTRRACRLARDAFAAGLDGQAILPRIIALGDLDEDEIIFAEAATAELAEDSL
                     ALPPAISPLERRLLLAQLIVRWAAAIRPEQGAPLIANTPAAALGLADDLARLIDDVIT
                     RQMDWRRLDGLVPDQFDKYWQFTLDFLKIARTYWPERLNEVGEIDAAARRDLLIEAEI
                     KRLAGSTDPVIAAGSTGSMPATAKLLAAIAQLPHGAVVLPGLDMELDEESWRRIAGGE
                     ADKSAPAAVHPQFAMQALLERIGITREAVRQLAAPLAHGREMLASEALRPAATTDRWQ
                     TRLSDPGFAAAADAAMAGVSAIEAANPEEEALSIAVCLREKIETPDKTVALVTPDRTL
                     ARRVAAALERWRVEVDDSGSDALADTRAGIFARLAAEVVLGGLEPAPLIALLKHSLLR
                     LRAEARAHARAVAALERAVLRGPRPRRGSAGLAHALTTFKEMQHNLHRNDPRRFVLAA
                     DLEAAEQLVRDLAEAIAPLERLVGSQQSLFALAQAHANTLEALADERDVGISAYAGTD
                     GRQLQRVFEKIAESPSSRTLELAAAEYPEVFHLLCSRRAERRAEPGNARVHIFGLLEA
                     RLQNYDRLVLAGLNEGVWPPDTRSDAWLSRPMRLELGLNLPELRVGLSAHDFAQGLGA
                     PEVIITRASKEAGAPTVRSRFVQRLAAVAGEKRWKEALKRGAMYTEYARALDQPAKVS
                     PVARPQPVPPPEARPSQLSVTDIENWLRDPYTIYAKHVLRLFPLEAIDTPPGAADRGT
                     FIHESIGEFTKIFADALPADVALELKAIGKQHFEPLADYEEARAFWWTRFLRIADWFE
                     GWERERRAGASKIFAEISGKHPIPLGSAEFLLTARADRIERRADGSYAILDYKTGQPP
                     TEPQVRSGLAPQLTLETAVLRKGGFAGIPPGSVSEIAYVRLKGGDPPGETKGINLVEG
                     SPDSCADLALQKLAGIAYRFLVEGEPYRSLVHPMWKKHYGDYDHLARVKEWAASGGES
                     EFEQ"
     gene            3236..>4051
                     /locus_tag="VIY07_11350"
     CDS             3236..>4051
                     /locus_tag="VIY07_11350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEY6382385.1"
                     /translation="MSLARQIPDAATARQIAAADPERSVFVSANAGSGKTHVLVQRVI
                     NLLLRGEDPAKILCITFTKAAAANMATRVFETLAEWTALDDATLDEKIRLATGKTPSP
                     TQRSIARRLFANALETPGGLKVQTIHAFCTRLLHQFPFEADVAARFDVLDEAATSQLL
                     NELTLEVLLEGATKPQSPLGKALADAITSAADVTFKEVIAEAISKRDLITQWTGRTGG
                     VQQTIDELTATFGLQPGDSIGAVEAEYFAGSRIPQDAWPALIDIFSKGSKNDQE"
BASE COUNT          771 a         1320 c         1262 g          698 t
ORIGIN      
        1 ttcggctcga agggttgtgg atgcacatcg gcacgccgaa agccatcgcc gaagcggaag
       61 ccgcgatcca cgcaagcgca gggtagcatt cggccggatt cgccagccgt ccaaagcatg
      121 tatcattcac cgcgatgcca gccacgaaac cacgtgtttt caatatcccg gcctcggcgc
      181 cgtttctgcc agaactgact gtcgcgcttc gacgcggcga gctggtgccc ggctttccgg
      241 cgtcgaagga tccgctcgaa ttagcccgcg ccacgctcta tctgccgacc cggcgcgcct
      301 gccgcctggc gcgagacgcc ttcgccgccg ggctcgacgg gcaagcgatt ctgccgcgca
      361 tcatcgcgct tggcgatctc gatgaggacg agatcatttt cgccgaagcc gcaaccgcgg
      421 agctcgccga agactcattg gctcttccgc ctgcgatcag cccgttggag cgccgtctct
      481 tgctggcgca actgatcgtg cgatgggccg cagcgattcg ccccgagcag ggagcgccac
      541 tgatcgcaaa tacgccggca gccgccctcg gtctcgccga cgatcttgcc cggctgatcg
      601 acgacgtcat cacgcgccag atggattggc ggcggctcga tggcctcgtt cccgatcagt
      661 ttgacaagta ttggcaattc actctcgact ttctcaagat cgcgcgtacc tattggccgg
      721 agcgtctcaa cgaggtcggc gaaatcgatg ccgctgcacg gcgcgatctt ctgatcgagg
      781 ccgaaataaa acggcttgcc ggaagcaccg acccggtgat cgccgccggc tccaccggat
      841 cgatgccggc aaccgcaaag ctgcttgccg caatcgcaca gcttccacat ggcgcggtcg
      901 tgttgccagg tcttgatatg gagcttgacg aggagtcctg gcgtcggatc gccggcggag
      961 aggctgacaa aagcgcgccc gctgctgttc atccacagtt cgcaatgcag gcgctgctgg
     1021 aacgcatcgg catcacgcgc gaggcggtaa ggcaactcgc cgccccgttg gcgcacgggc
     1081 gcgaaatgct ggcctcggaa gcactcaggc ccgccgcaac gaccgatcgt tggcaaaccc
     1141 gcctcagcga ccccggcttc gccgccgccg cagacgcagc gatggccggt gtaagcgcca
     1201 tcgaggctgc caatcccgaa gaggaagcac tttcgatcgc cgtttgcctc cgcgagaaaa
     1261 tcgaaacccc ggacaaaacc gtcgcgctgg taacacctga ccgtacgttg gcacgccgcg
     1321 tggcggccgc gctcgagcgc tggcgggtcg aagtcgacga ttcgggcagc gatgccctcg
     1381 ccgacacacg tgccggaatc tttgcgcgac tggcggcgga agttgttctg ggaggactcg
     1441 aaccggcgcc gctgattgcg ctgttgaaac attccctgtt gcggctccgt gcggaagcac
     1501 gagcgcatgc tcgcgccgtc gccgcactgg agcgtgccgt gttgcgcggc ccgcgcccac
     1561 gccggggttc agcagggctt gcgcacgcgt tgaccacgtt caaggaaatg cagcacaact
     1621 tgcaccgcaa cgacccgcgc aggttcgtgc tcgccgccga cctcgaagcc gccgaacaac
     1681 tggtccggga tctagccgag gcgattgccc ctttggaaag gttggtcggc tcgcagcaaa
     1741 gcctgttcgc gttggctcag gctcatgcca acacactcga ggcactcgca gatgaacgcg
     1801 acgtggggat ttccgcttac gcgggtacgg acggcaggca gttacaacgc gtcttcgaga
     1861 agatcgccga aagtccgtca tcgcggacgc ttgaattggc agcggctgaa tatcccgagg
     1921 ttttccatct gctctgctcg aggcgtgccg agcggcgcgc cgaacccggc aacgcgcgcg
     1981 tgcatatttt cggcttgctc gaagcgcgcc tgcagaacta cgaccgcctc gtactggccg
     2041 ggctcaatga gggcgtatgg ccgcccgata cacgcagcga tgcttggctg agccgtccga
     2101 tgcggctgga gttgggcctc aatctgccgg agctgcgggt tggcctgtcg gcgcacgatt
     2161 ttgcccaagg gctgggtgcg cctgaggtga tcatcacgcg cgccagcaag gaggccggcg
     2221 cgccgacggt acgctcccgc ttcgtgcagc gactggccgc cgtcgccggt gaaaaacgct
     2281 ggaaagaggc gctaaaacgc ggcgcgatgt atacggaata cgcgcgcgcg ctcgatcaac
     2341 ccgccaaagt gtctcctgtg gcacgcccgc aacccgtgcc cccgccggaa gcccggcctt
     2401 cccagctgag cgtcacggac atcgaaaact ggctgcgcga tccgtacacg atctacgcca
     2461 agcatgtcct gcggctgttc ccgctcgaag ccattgacac cccgccgggc gccgccgacc
     2521 gcggcacctt catccacgaa tcgatcggtg aattcacaaa gattttcgcg gatgctttgc
     2581 ccgcagatgt ggctctcgaa ctgaaggcaa ttggcaagca gcacttcgag ccattggcgg
     2641 actacgagga agcgcgggcg ttctggtgga cgcgcttcct gcgcatcgcc gactggttcg
     2701 aaggctggga gcgcgagcgg cgcgccggag cgagcaagat ctttgccgag atatcgggaa
     2761 agcatccgat tccactcggg agcgccgagt ttctcctcac cgcgcgcgcc gaccgtatcg
     2821 aacgacgcgc cgatggaagt tacgccatcc tcgattacaa gactggacag cccccgacgg
     2881 agccgcaggt gcgcagtggg ctggcgccgc aactcaccct ggaaaccgcg gtcctacgca
     2941 agggaggctt cgccggaatt ccccccggct cggtgtctga gattgcctat gtgcggttga
     3001 agggcggcga tccgccgggc gaaaccaagg gcattaatct cgtcgagggc agcccggata
     3061 gctgcgccga ccttgcgctg cagaaactcg ccggaattgc gtacagattc ctggtcgaag
     3121 gcgagccgta tcgttcgctc gtccatccga tgtggaaaaa gcactacggc gattacgacc
     3181 acctcgcgcg cgtcaaggaa tgggcggcgt ccggcggcga aagcgagttt gagcaatgag
     3241 tcttgcccgc cagattccgg acgccgccac ggcgcggcag atcgcggcag ccgatcccga
     3301 acgctctgtc tttgtctctg ccaatgccgg ctccggaaag acccatgtgc tggtgcaacg
     3361 cgtgattaat ctgctgctgc gtggcgaaga cccggcgaaa attctctgca tcacgttcac
     3421 caaggctgcc gccgcaaata tggcgacccg ggtgttcgag acgctggcag aatggaccgc
     3481 cctcgacgac gctacgctcg acgaaaaaat ccgcctcgcg accggcaaga cgccgagccc
     3541 cactcagcgc tcgattgcgc ggcgcttgtt cgccaacgcg ctcgagacgc cgggcggatt
     3601 gaaagtgcag acgatccacg ccttttgcac gcgcctgctg catcagtttc cattcgaggc
     3661 cgatgtagcg gcgcgcttcg atgtgctcga cgaagccgcc acctcgcaat tgcttaatga
     3721 actgaccctg gaagtgctgc tggaaggcgc taccaagcct cagagcccgc ttggcaaggc
     3781 tctggccgac gcgatcacat ccgccgctga cgtcactttc aaggaagtga ttgcggaagc
     3841 aatcagcaag cgcgacctga tcacgcagtg gaccggacgc accggcggcg tccagcagac
     3901 gatcgacgaa ctgaccgcaa ctttcggact gcagcccggc gacagcattg gcgcagtgga
     3961 agcggaatat tttgcaggtt cgcgcattcc gcaggacgca tggccggcgc tgattgatat
     4021 cttctccaag ggctccaaaa acgatcagga a
//
LOCUS       DATDHO010000593         3252 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_326183, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000593 DATDHO010000000
VERSION     DATDHO010000593.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3252)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3252)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3252
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326183"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            126..320
                     /locus_tag="VIY07_11355"
     CDS             126..320
                     /locus_tag="VIY07_11355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382386.1"
                     /translation="MSEKRTKNSGVMIVAFAAVAAWQIYDMATAAETPSRSLAILQYA
                     LLVGLLIGLGGAVLNFIRSQ"
     gene            702..1607
                     /locus_tag="VIY07_11360"
     CDS             702..1607
                     /locus_tag="VIY07_11360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006935859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEY6382387.1"
                     /translation="MSIRPVKRIVQSKPTIEGAGVRLRRAFGFGDTEETDPFLLLDDF
                     RNDRPSDYLAGFPWHPHRGIETITYVLSGTVEHGDSLGNRGTLSSGDVQWMTAGRGIM
                     HQEMPKGDAQGRMHGFQLWANLPSSLKMTAPRYQDINGADIPEVIDDDGTRVRIVCGD
                     FWGKKGPVDGVAADPRYLDVFVPARKRKTLKVEVERHAFAYVFEGDGTFHAASQPIGV
                     LSEKQMDGNEILVREKAGDRSLVLFDSGDEITVQAGENGIRFLLVSGKPIQEPVAWYG
                     PIVMNTQAELQQAVAELRKGTFIER"
     gene            1684..2298
                     /locus_tag="VIY07_11365"
     CDS             1684..2298
                     /locus_tag="VIY07_11365"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEY6382388.1"
                     /translation="MRLWRYEKKAGIPMEAVTRVRDMRARVHDFDWDATPLGPRRTWS
                     SSLAWSVDLILASGFPMSVRWGPDLIMIYNDAYASLLGDRHPRALGRPLRDIWPEIYS
                     ELGPLNEAILRGERGSFFADDHRWLIHRYGVPEEAHFTLSFSPISDTSSPSGIGGVLA
                     TAFEITDRVRDEQTLRVLTDRLESEVQQRTRERDRNLDCVRRFA"
     gene            2327..3252
                     /locus_tag="VIY07_11370"
                     /pseudo
     CDS             2327..3252
                     /locus_tag="VIY07_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007770985.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
BASE COUNT          691 a          929 c          985 g          647 t
ORIGIN      
        1 tatctactgc gggagcgtta cgctgtcaag atttttttcc taggaatttt tacacaccag
       61 cgccaggaat ctggaatctg cgcggtaaat aaactaatgt tgcaaagtac ggcgggggct
      121 gaatcttgag cgaaaaacgg acgaaaaatt ccggcgtgat gatcgtcgca ttcgccgcag
      181 tcgccgcgtg gcagatctac gacatggcaa cggcggccga aacacccagc cggtcgcttg
      241 cgattctgca atacgccttg ctcgtggggc tgcttatcgg actgggcggg gccgttctca
      301 actttatccg atcgcaatga tcgtggatcc ctcagcgtgg cgagtcggaa cggcagctgc
      361 gtgggccttc gtcccaaagc cagccacatt tggtgcagcc ggccaaaccg aggctcacgg
      421 cgaacaggca cataacggct accagacgtg acatgatgag gcgagcatag ccgataacgg
      481 tccgtgccgc gataggtatc cctccgtcag tgatacgcat cgcttgcatg cctgcatcac
      541 ccgattggat gatagaggcg tcgagctcgg tcttttttct atggacgaaa gccctatatg
      601 aatattcgaa catgaatgta agctaagtgt gcgcctcgcg cgtcaagtgc ggggtacttt
      661 ttggcctgtg gcgtcgctga cgcctcacga aaggcaccca gatgtcaatc cgccccgtta
      721 agcgcatcgt gcagtcgaag cccactattg aaggtgctgg cgtcaggctg cgtcgcgcat
      781 ttggtttcgg cgacaccgag gaaacagatc cattcctcct tctcgatgac ttccggaatg
      841 accggcccag cgactatctc gccggtttcc cctggcatcc gcatcgcggc atcgagacaa
      901 tcacgtatgt attgtcgggc acagttgagc acggcgacag cctgggcaac cgcggaacac
      961 tcagttcggg cgatgtgcaa tggatgacag ccggacgcgg catcatgcat caggaaatgc
     1021 cgaagggcga tgcgcagggt cgcatgcacg gctttcagct ctgggccaac ctgccctcct
     1081 cgctcaagat gacggcgccg cgatatcagg acatcaacgg cgcggatatc cccgaagtca
     1141 tcgatgatga cggcacgcgc gtgcggatcg tatgcggcga cttctggggc aaaaaaggtc
     1201 cggtcgatgg ggttgctgcc gatccacgat atctcgacgt ctttgtgccc gctcgtaaac
     1261 gcaagacgct gaaggtcgag gtcgagcgcc acgcctttgc atacgttttc gaaggcgatg
     1321 gaacgtttca tgcggcctcg cagcctatcg gtgtactcag cgagaagcag atggatggca
     1381 acgaaatcct ggtgcgggaa aaggccggag accgttcgct ggtgctgttc gattccggcg
     1441 acgagatcac ggtgcaggca ggcgagaacg gcattcgttt cctgttggtg tccggaaaac
     1501 cgatccagga accagtcgcc tggtacgggc caatcgtgat gaatactcag gccgaactgc
     1561 agcaggcagt ggccgagctg cgcaagggga ctttcatcga gcgctgactg cggcccctct
     1621 acctagttcg agggaacttt ccctttggta cggcgtttgt gggctggccg aagggggtaa
     1681 tctatgcgcc tttggcgcta tgaaaagaaa gccgggatac cgatggaagc cgtgacacgt
     1741 gtgcgcgaca tgcgcgcgcg agtgcacgat tttgactggg acgccacgcc tttgggaccc
     1801 cggcggacct ggtcctcttc gctggcatgg agcgtcgatc tgatcctggc ctcgggcttt
     1861 cccatgtcgg tccgctgggg cccggatctg atcatgatct acaacgatgc ctatgcaagc
     1921 ctgctcggcg accgccaccc gcgcgcgctg ggcagaccgc tacgcgacat ctggccggaa
     1981 atatatagcg agctgggacc cctgaatgag gccatcctgc gcggcgaacg cggtagcttc
     2041 ttcgccgatg atcaccggtg gctgatccat cgttacggcg tacccgaaga agcacacttt
     2101 acactcagct tcagtccgat ttcggatacg tcatctccga gtggcatagg cggcgttctt
     2161 gccactgcgt tcgaaatcac ggatcgcgtg cgcgatgaac agaccctgcg tgttctcacc
     2221 gaccgcctcg aaagcgaagt gcagcagcgc acacgcgagc gcgaccgcaa tctggactgt
     2281 gtcagaagat ttgcttgagg ttgccaactt cgaaggctac ttcctgagcg tcaatcctgc
     2341 ttggacgaat ttgctcagct ggacggaaga cgaaatcaaa acgctgcacg tgaatgaact
     2401 ccgtcacccc gacgatgcgg ccgcggccat tgctgctcgc tcgcggctgg cgcagggaat
     2461 accgacagtg cgcgtagaga accgattgcg tcaccgagac ggcagctggc gctggatctc
     2521 atggacgatg accgccgata gtggactgat ttacgtttcc ggacgtcaca taacatccga
     2581 gaaacaggcg gcagtggcgt tgcgtgaaag cgatcggcaa ttccgctcgc tggttgccgg
     2641 cgtaaccgac tatgcactgt acatgctcga tccgaacgga gttgtttcga gctggaacgc
     2701 cggcgccgaa cgcatcaagg gatatagcga agacgaaatc atcggccggc atttttcgca
     2761 gttttacacc cctgaagatc gcaaggctgg tctgccgaac cggtcgttgg ctatcgctgc
     2821 agccaccggc agcttcgaag ccgaggcctg gcgcatgcgg aagggcggtg cgctattctg
     2881 ggcgaatgtc gtcatcgacg cgatccatga cgaaagcgga aggcttatcg ggttcgccaa
     2941 gatcacgcgc gacataaccg aacgccgcaa tgcccaggag gcgctcgaac gcgcacacca
     3001 gcaacttgcg caggcgcaga agatggaagc gcttggccag ttgaccgggg gtgtggcgca
     3061 cgatttcaac aatttgctga tggttgtcag cggtcaggcg caggtgctca tgcgacgcct
     3121 gaaagatcag aaagagatcc gctcgctgga agcgatcctt accgccgcct cgcgcggtga
     3181 ggcactaaca aggcagctgc ttacttttgc acgtcggcag ccgcagaacc cgcgcactgt
     3241 ccagctcagt ca
//
LOCUS       DATDHO010000594         3469 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_28431, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000594 DATDHO010000000
VERSION     DATDHO010000594.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3469
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28431"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..141
                     /locus_tag="VIY07_11375"
     CDS             <1..141
                     /locus_tag="VIY07_11375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382389.1"
                     /translation="EIKQKLQTHRPRTIGHASRIDGVTPAALTLLVAHLRRGKKVSAK
                     SA"
     gene            138..803
                     /gene="rsmG"
                     /locus_tag="VIY07_11380"
     CDS             138..803
                     /gene="rsmG"
                     /locus_tag="VIY07_11380"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEY6382390.1"
                     /translation="MSKGGKGAFDLSLDKARALALTPVSRETEERLDRYVELLLYWQS
                     RVNLVSPSTLRELWTRHVADSLQLIPLAPQARIWADLGSGGGFPGLPIALAGEVVTRV
                     HLIESNGKKAAFLREAVRVTEARAVVHQERAEKFGESCAETVHVVTARAVAPLKTLCN
                     QAFPLLRGGAIGLFPKGQDVDVELTDAAKYWRLDASKVPSKTSPAGSIVVIRNLEPIG
                     NEH"
     gene            932..1744
                     /locus_tag="VIY07_11385"
     CDS             932..1744
                     /locus_tag="VIY07_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEY6382391.1"
                     /translation="MKPDAARPRVLAIANQKGGVGKTTTAINLGTALAAIGEHVLIVD
                     LDPQGNASTGLGIERKSRRTSTYDVLTGAMPMRDAVLQTGVPQLYIAPSTLDLSGLEL
                     EIGQQRDRAFRLRNALRQLNSGTRTQDFNYVLVDCPPSLNLLTVNAMAAADSILVPLQ
                     CEFFALEGLSQLLKTIEQVKTTLNPTLSIHGIVLTMYDSRNNLSGQVVADVRQFMGNK
                     VYETIIPRNVRVSEAPSYGKPVLVYDLKCVGSEAYLRLATEIIQREKALKAG"
     gene            1825..2697
                     /locus_tag="VIY07_11390"
     CDS             1825..2697
                     /locus_tag="VIY07_11390"
                     /inference="COORDINATES: protein motif:HMM:TIGR00180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEY6382392.1"
                     /translation="MSDHSRLGRGLAALIGDVGDETSAADSSRKPRRAPIENLRPNPR
                     NPRRSFTDSELDELSVSIRERGIIQPIVVRALEGDNFEIIAGERRWRAAQRAGLHDVP
                     IAVVEANDAQSLEFAIIENVQRTDLNPIEEASGYLALMDDFNRTQEDVAQIVGKSRPH
                     VANTIRLLKLSEPVKQLVRSGKISAGHARLLVGHPNAEQIAQEIIEKNLSVRQVEAQL
                     QQEAATQRRESQRESKGNANATKDADTRALEKRLSDALGLAVSVDHRGEGGTLRIKYR
                     DLEQLDAVLKKLGA"
     gene            2849..3181
                     /locus_tag="VIY07_11395"
     CDS             2849..3181
                     /locus_tag="VIY07_11395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382393.1"
                     /translation="MANDPPKAKRILHVKVKTPSADATTLLTTMMKNALPLYKAFGEA
                     KVRLLRNADDQAQFVQVIEYETDQAVELNRQKLASEPMMQNYLQAWRTLFPGAMEIDV
                     YEDITDNR"
BASE COUNT          788 a          947 c         1034 g          700 t
ORIGIN      
        1 gagatcaaac aaaagctcca gacgcaccgg ccacgcacaa ttggacatgc gagccggatc
       61 gacggcgtca cgccggcggc cctgacattg cttgtcgcgc acctgcggcg cgggaaaaaa
      121 gtttccgcga aatcggcgtg agcaaaggcg ggaagggcgc tttcgatctc tctctcgata
      181 aggcgcgggc actcgcgctc actcctgttt cacgtgaaac ggaagaacgg ctcgaccgct
      241 acgtggagct gctgctctac tggcagagca gggtcaatct tgtgtcacct tcaacgctgc
      301 gggagttgtg gacgcgtcac gttgctgatt cgctccagct catccctctg gcgccgcagg
      361 cgcgaatctg ggctgatttg ggatcaggtg gtggatttcc tggcctgcca atcgcgctgg
      421 cgggcgaggt ggtgaccagg gttcatctca ttgagagcaa tgggaaaaaa gcagctttct
      481 tgcgtgaagc ggtcagagtg acggaggcga gggcggttgt gcaccaggag cgggcggaga
      541 aatttgggga aagctgtgcc gaaaccgtgc atgtcgtcac agcccgtgct gtggccccat
      601 tgaaaaccct ctgtaatcag gcgtttcctc tgttgagagg tggtgccata ggtctgtttc
      661 ccaagggtca agatgtagac gttgaattga ccgatgccgc taaatattgg agactcgatg
      721 cgtccaaggt accaagcaag accagtcccg ccggttcgat tgttgttatt cgcaacctgg
      781 agccgatagg gaacgaacat tagagtattt gtcagtattt tcaaaggttt aggtaaactg
      841 tccgctgaac gatggaatgc ggagcatgag cgaccttcca acctctgacc cgcctgtcga
      901 tccaccggtt gtgccgttcg gcaagccagc catgaaaccc gatgctgctc gcccacgggt
      961 gcttgcgatc gccaatcaaa aaggtggggt cggcaaaacg acgaccgcca tcaatctcgg
     1021 gaccgcactc gccgcgatcg gcgagcatgt tctgatcgtc gatctcgacc cgcagggtaa
     1081 tgcctctacc gggctcggca tcgagcgcaa gtcgcgccgc acatcgactt acgatgtgct
     1141 caccggggcg atgccgatgc gcgacgccgt cctgcagacc ggcgtgcccc aactttacat
     1201 cgccccgtcg acgctcgacc tgtcgggcct cgagcttgaa atcggtcagc agcgcgatcg
     1261 cgccttccgc ttgcgcaatg ccttgcggca gctcaacagc ggcacgcgta ctcaggattt
     1321 caattacgtg ctggtcgact gtccgccatc gcttaacctg ctgacggtca acgcgatggc
     1381 cgcagcagat tcgattctcg tgccattgca gtgtgagttc ttcgcgctcg aaggactgtc
     1441 gcagcttctg aagacaatcg agcaggtgaa gaccacgctc aatccgacgt tgtcgattca
     1501 cggcattgtg ctgaccatgt acgactcgcg caacaacctg tccggccagg tcgttgccga
     1561 cgttcggcaa ttcatgggca acaaggtcta cgagacgata atcccgcgca atgtacgcgt
     1621 ttcggaagcg ccgtcctatg gcaagccggt gctggtttac gatctcaaat gcgttggcag
     1681 cgaagcgtac ctgcgcctcg ccactgagat catccagcgt gaaaaggcat tgaaagccgg
     1741 atagcgcact cgcgagccgg ccctcgggta cgaatgggat aaaagggaag ggacaaggtg
     1801 gcacggagtt caggagctgc ggcaatgtcg gatcactcgc gattgggacg cggcctcgcc
     1861 gctctgatcg gcgacgtcgg cgacgaaacc tcggctgcgg acagtagtcg caaacctcgt
     1921 cgggcgccga ttgaaaatct ccgtcctaat ccgcgcaatc cgcgccgatc gtttacggat
     1981 tccgagcttg atgagctgtc ggtgtcgatc cgggagcgcg gcattattca accgattgtc
     2041 gtgcgtgcac tggaaggcga taattttgaa atcatcgcgg gtgagaggcg atggcgtgcg
     2101 gcccaacgcg ctggcctgca tgacgtgccg atcgcagtgg tcgaagccaa cgatgcgcaa
     2161 tcgctggaat tcgccatcat cgaaaatgtg cagcgtacgg acctcaaccc cattgaggaa
     2221 gcaagcggct acctcgcgtt gatggacgat tttaatcgta ctcaggaaga cgtcgcgcag
     2281 atcgtcggca aaagtcgacc acacgtcgca aacacaattc ggctgctcaa gttatcagag
     2341 ccggtaaaac aactcgttcg ctcgggcaaa atatcggctg gccatgcgcg acttctggtc
     2401 ggccatccca acgccgagca gatagcccag gaaatcatcg aaaagaattt gagtgtgcgc
     2461 caggtcgaag cgcagttaca acaagaagcg gccacgcagc gtcgcgagtc acagcgcgag
     2521 tcgaagggca atgccaatgc aacaaaagat gccgatacgc gtgcattgga gaagcgcctg
     2581 tcggacgcct tgggacttgc agtcagcgtg gatcaccgcg gcgagggcgg cactttgagg
     2641 ataaagtacc gggatctgga gcagttggac gcggtgttga agaagctggg tgcctgagtt
     2701 tcctcgctgg cgataggcgc ggaagcatat tgatttaatc actatctcgc cggaagaatg
     2761 cctaggggcg gcaggtcgct gctggccgat cccgtgggcc ccggggagac gttcttgtgc
     2821 atctcgcgca atcgaggagg ccgcccaaat ggccaatgac ccgccgaagg ccaagcgaat
     2881 tttacatgtg aaggtaaaaa cgccgtcggc cgatgcaaca acactgctca caacgatgat
     2941 gaagaacgcc ctgccattgt acaaggcatt cggcgaggca aaggttcgct tgctgcgcaa
     3001 cgccgacgat caagcccaat tcgtccaagt gattgaatat gaaacggatc aagcggtaga
     3061 gctcaatcgt cagaaactgg ccagcgagcc gatgatgcaa aactacttgc aggcctggcg
     3121 tacgcttttc ccgggcgcga tggaaatcga cgtgtacgaa gacatcacgg acaatagata
     3181 gcgtcgtttt gtctcgtgaa agggatcaga cgaatgtcat gcgattgggc gataggcgtt
     3241 ccaaaaattt atcgctaggg aataaacagt cgatacgcgt gttatttcgc ctgataaaaa
     3301 tgcactaacc aagtgcttcc aacgtgaccg gggaaaatca tgtcgaccat gcagagcagt
     3361 tcccatcgcg ccttgtcagc cgttgataac gtggctgcaa gtaccgcgga cgttcttctg
     3421 cttattggaa gaattcttct tgcctggatt tttatccgca gtggctggg
//
LOCUS       DATDHO010000595         4935 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_177534, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000595 DATDHO010000000
VERSION     DATDHO010000595.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4935
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_177534"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            163..720
                     /locus_tag="VIY07_11400"
     CDS             163..720
                     /locus_tag="VIY07_11400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEY6382394.1"
                     /translation="MNVHVSPGGFPALVLNADFRPLSYYPLSLWSWQDAIKAVFLERV
                     NIVANYDRAVHSPSFEMKLPSVVSLKTFVKPSTHPAFTRFNVFLRDRFVCQYCGDRDD
                     LTFDHLLPRSRGGHTVWNNVVAACSPCNLRKGNLTPNEAKMWPSQMPFQPTVHHLHRN
                     GRLFPPNYLHESWLDYLYWDTELEP"
     gene            751..1578
                     /locus_tag="VIY07_11405"
     CDS             751..1578
                     /locus_tag="VIY07_11405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007770176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY6382395.1"
                     /translation="MISKLHHRRSVRAAFFAISFAASLCDAGITAAQPAPSSAGSVEP
                     QLIEDLVAANRILADQGVLDGWGHVSVRHPRDPNRYLLSRSRAPELIIAEDIMEFDLD
                     SNPVDARSRPLYTERFIHGEIYKARPDVVAIVHTHAPALIPFGISKVPLKPVYHRSAF
                     LAAGVPVFEIRERAGMTDMLIRDQALGRALADALGNHPAALMRGHGAVVVGPSLQRVV
                     GRSIFLPLNATLQMQAAALGGPVTYLDPEEARKIEEREGYGLARAWEAWKRKAMAKH"
     gene            complement(1745..2983)
                     /locus_tag="VIY07_11410"
     CDS             complement(1745..2983)
                     /locus_tag="VIY07_11410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin-dependent oxidoreductase"
                     /protein_id="HEY6382396.1"
                     /translation="MEVLIIGAGIGGLTLGLMLHRAGIACRIFEAAPELKAVGVGINI
                     LPHASRELCALGLEDALAKVAVTTREYCFYNRFGQFIYSEPAGRFAGYDVPQFSIHRG
                     DLQMVLLDAFIERAGADKIVTGWRCTRVEHDGPEAVAHFEDINGKPLPSQRGSVVVSA
                     EGIHSVLRKQLFPDEGSPKYSGINMWRGVTRWKPFLSGASMIRIGWHHPAKLLIYPIR
                     NNVDAEGRQLVNWVCDIETPQYQARDWNRRGRLEDFLPAMADWHFGWLDVPKFITCAD
                     TILEYPMVDQDPLPRWSLGRLTLLGDAAHPMYPRGANGAAQAILDCRALSDALAANAD
                     AVTALKVYEANRLPATSEVVLANRKAPPDAILHEVYRRTGDKPFKNIDDVITRDELVA
                     LSESYKRVAGYDRERLKNQA"
     gene            complement(3007..3543)
                     /locus_tag="VIY07_11415"
     CDS             complement(3007..3543)
                     /locus_tag="VIY07_11415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEY6382397.1"
                     /translation="MDDYVALLRRDPPLAAAAVVALVGTLTICGFFFFQYVLGYPPCP
                     LCLDQRSAYYASVPLAALLWLGASHGASSKVMIAGFAVITAIMLWNAGLSAYHAGVEW
                     KFWAGPADCSGPISSLGSASDMLKRLQDIRIVRCDEAAWRFLGISLAGYDVLVSLFLA
                     IVAAWGAKASLARRKTSG"
     gene            complement(3573..3658)
                     /locus_tag="VIY07_11420"
     tRNA            complement(3573..3658)
                     /locus_tag="VIY07_11420"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3622..3624),aa:Leu,seq:caa)
     gene            3794..4000
                     /locus_tag="VIY07_11425"
     CDS             3794..4000
                     /locus_tag="VIY07_11425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018326178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6494 family protein"
                     /protein_id="HEY6382398.1"
                     /translation="MNEEALNMSLRKFLKVVGVTSQQEIEKAIRAAVADGRLKGNETI
                     QAQMVLTIGKVGLSHKVDGEIELA"
     gene            complement(3997..>4935)
                     /locus_tag="VIY07_11430"
     CDS             complement(3997..>4935)
                     /locus_tag="VIY07_11430"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382399.1"
                     /translation="VLFLSPQHGRAQDAKLAVIVFPGVQNLPMFAAQAKGLYAKRGLN
                     VEIKFTPNSDELRNGLAEGRYQIAHSAVDNAFALKDKANVDIAVVLGGDNSFNHLIVQ
                     PEITSLADIKGKTVAVDAVNTAYAFQLYEILRQKGLNKGDYEVKPVGGTGSRLEAMTK
                     DKTLVAAMLNPPFSIRAEKAGLKDMGTAAAALGAYQGSSAFVLRSWAQANADTLVKYL
                     EAYVEGLRWSFDPKNRSEAVSLLVERLKLPEDIAAQSYDSTKNDFNRDGAIDIEGVRN
                     VLKLRAQFEGGSPADPEEYLDLSYYQKARAGLERTN"
BASE COUNT          993 a         1494 c         1463 g          985 t
ORIGIN      
        1 cttcggcagg gaggcgaatt ccttttcaaa agctttgccc ggcggaaata gcgcctttgc
       61 gggtaactct ccgtcccggc ttcacaatcc tgtcacgctg ccctattagt agcgcctcag
      121 ctgcgtggcg gcagcgttcc agggaggtcg aggagcgtcg ctttgaacgt gcacgtttcg
      181 cccggcggtt ttccggcctt ggtgctcaac gctgatttcc ggccgttgag ctattacccg
      241 ctgtcgctgt ggtcctggca ggacgcgata aaagcggtct tcctcgagcg ggttaacatc
      301 gtcgccaact acgaccgcgc cgtgcacagc ccttccttcg agatgaaact gccgagcgtg
      361 gtctctctca aaaccttcgt taagccttcc acccaccccg ccttcacccg cttcaacgtg
      421 ttcctccgcg accgctttgt ctgccagtat tgcggcgacc gggacgatct cacgttcgat
      481 catctgctgc cgcgttcgcg cggcggccac acggtctgga acaacgtggt cgctgcctgc
      541 tcgccgtgca atctgcgcaa gggtaacctg acgccgaacg aagcaaagat gtggccgtcg
      601 cagatgccgt tccagccgac cgtgcaccat ctgcacagga acggccggct gttcccgccg
      661 aactatctgc acgagagctg gctcgactac ctctattggg acaccgaact cgagccgtaa
      721 ggcccgcgac aattggcatt ggagccccgg atgatcagca agctgcacca ccgtcgcagc
      781 gtgcgagcgg cctttttcgc gatctcgttc gcggcaagct tgtgcgatgc cggtatcaca
      841 gcggctcaac cggcgccctc ctcagctgga tcggtcgagc cgcaattgat cgaagatctg
      901 gttgccgcca atcgcattct ggccgaccag ggagtgctcg acggctgggg gcatgtcagc
      961 gttcgtcatc cgcgcgatcc gaatcgttac ctattgtcgc gctcgcgggc gccggagctg
     1021 atcatcgccg aagacatcat ggaattcgac ctcgacagca atccggtcga cgcgagaagc
     1081 cggccgcttt acaccgaacg attcatccac ggtgaaatct acaaggcacg gccggatgtc
     1141 gtcgcgatcg tgcacactca tgcaccggcg ttaataccat tcggcatcag caaggtgccg
     1201 ctgaagccgg tctatcaccg gtcggctttc ctagccgccg gcgttccggt gttcgagatc
     1261 cgggaacgcg cggggatgac cgacatgctg attcgcgatc aggcgcttgg ccgcgcgctt
     1321 gccgacgcgc ttggcaatca tcccgcagca ctaatgcgcg gccacggcgc tgtcgtcgtc
     1381 ggaccatcgc tgcaacgcgt cgtgggtcgc agcattttcc ttccactcaa tgccacactg
     1441 cagatgcagg cggcggcgct gggcgggccg gttacctatc ttgatcccga ggaggctcga
     1501 aagatcgagg aacgcgaggg ttacggcctc gcccgggcct gggaagcgtg gaaacgcaag
     1561 gcgatggcga aacactgagg ggtgcgactc cggtcacact tgtgttggaa caaacaatgc
     1621 ctatatacgt ttgagcgatg atgtcgagcc gaaaggttcc gtcatcgagc ggccacgaat
     1681 atgcagcggg tgacgccgga tgtacgcgca ccttgcattt cgtggtcgtc agttttttga
     1741 gacctcaagc ctggttcttc aaccgttccc ggtcataacc cgccaccctc ttgtagctct
     1801 cggacagcgc gacgagttcg tcgcgggtga tgacgtcatc gatgttcttg aacggcttat
     1861 cgcccgtgcg gcggtagact tcatgcagga tggcgtccgg gggcgctttg cggttcgcca
     1921 gcacaacctc gcttgtggcg gggagtcggt tcgcttcgta aacctttaga gcggtgaccg
     1981 catcggcgtt ggcggcgagc gcatcggaca gcgcgcggca gtccagaata gcctgcgccg
     2041 cgccgttggc gccgcgcgga tacattggat gcgcggcgtc gccgagaagc gtcagacgcc
     2101 ccaagctcca tcgtggcagc ggatcctgat caaccatcgg atattcgaga attgtatcgg
     2161 cgcaggtgat gaatttgggc acatcgagcc agccaaaatg ccaatccgcc atcgcaggca
     2221 gaaagtcctc cagtcgcccg cgccgattcc agtcgcgcgc ctggtactgc ggcgtctcaa
     2281 tgtcgcacac ccaattcaca agctgccggc cctcggcgtc gacattattg cggatcggat
     2341 agatcagaag cttcgccgga tgatgccagc caatgcggat catgctcgcg cccgaaagga
     2401 acggcttcca gcgcgtaacg ccgcgccaca tattgatccc ggaatatttg ggcgacccct
     2461 cgtccggaaa gagctgcttg cgcaagacag aatgaatgcc ttcagcgctg acgacgacgc
     2521 tgccgcgctg gctaggcaac ggcttgccgt tgatatcctc gaaatgcgcg acggcctccg
     2581 ggccatcgtg ttcaacgcgg gtacaacgcc agccggttac gatcttgtcc gcgccggcgc
     2641 gctcgatgaa ggcgtcgagc agaaccatct ggaggtcgcc gcgatgaata gaaaattgcg
     2701 ggacgtcata gccggcgaag cggcccgccg gctcgctgta aatgaattgg ccgaagcggt
     2761 tatagaagca atattcccgc gtggtcactg cgactttcgc gagagcgtcc tcaagaccga
     2821 gcgcgcataa ttcacgcgac gcgtgcggca gaatgtttat ccccacgccg acggccttca
     2881 gttcgggagc agcctcaaag attcggcagg cgattccggc gcgatgaagc atcagcccga
     2941 gggtcaatcc gccgatgccg gcgccgatga tcaggacttc catggcataa aacctgtggc
     3001 gatgttctag ccggacgttt tacggcgcgc cagcgaagct tttgcgcccc aggcggcgac
     3061 gatcgcaaga aacagcgata ctagaacgtc atagccggcg agcgaaattc cgagaaatcg
     3121 ccaggcggcc tcatcgcagc gcacgatccg gatatcctga agtcgtttca gcatgtcgct
     3181 ggccgagccg agactgctga tcggcccgga acaatccgca ggtccggccc agaatttcca
     3241 ctcgacgccg gcatgataag ccgacagccc ggcgttccac agcatgatcg cggtgatcac
     3301 cgcaaagcct gcaatcatga ccttgcttga agcgccgtgg ctcgcaccga gccacagcag
     3361 cgccgcaagc gggacgctgg cgtaatacgc actgcgttga tcgaggcaga gggggcacgg
     3421 cggatagccc agaacatatt ggaagaaaaa gaatccgcag atcgtcaatg taccgacgag
     3481 agcaacgacc gctgcggcgg ccagcggcgg atcacggcgg agcagagcaa cataatcgtc
     3541 catgcgcgcg aagacctgtc ggcgaagttt cgtggtgccg gtggtcgggg tcgaaccgac
     3601 actcctttgg ggaacacgat tttgagtcgt gcgcgtctgc caattccgcc acaccggccg
     3661 agggctagct atagcgtcaa gtcgctgtcc agccaaacgg aaatgcaagc attctttgcg
     3721 gcataaacgc ttggtgtcgg cacgcactga gccgtaacat tggtcgcaac gcgctattta
     3781 aggagtcttt caaatgaacg aagaagccct caacatgtcg ttacggaaat tcctcaaggt
     3841 cgtgggcgtt acctcgcagc aggagatcga aaaggcgatc cgcgcagcgg tcgccgacgg
     3901 gcgtctcaag ggcaatgaaa ccattcaggc gcagatggtc ctcaccattg gcaaggtcgg
     3961 tctcagccac aaagtcgatg gcgaaatcga gctcgcttag ttcgttcttt caagcccggc
     4021 acgcgctttc tgatagtagg acaggtcgag atattcttcg ggatctgccg gggacccacc
     4081 ctcgaactgt gcgcgcagct tgagcacgtt cctcacgcct tcgatgtcga tcgcaccgtc
     4141 gcgattgaag tcgttctttg tgctgtcgta ggactgcgcg gcgatatcct ccggcagttt
     4201 taatcgctcg accaacaggc ttacggcttc ggatctgttt ttcgggtcaa agctccagcg
     4261 caatccttcg acataggcct cgagatattt aactagcgta tcggcattag cctgggccca
     4321 tgatcgcagc acgaacgcgc tgcttccctg gtaagcgcca agtgcagccg cagcggtgcc
     4381 catgtccttg aggccggcct tttcggcgcg gatggaaaac ggcggattca acatggcggc
     4441 aaccaatgtc ttgtcctttg tcatggcttc gagacgcgat cctgttccgc cgaccggctt
     4501 gacctcgtag tcgcctttgt tgagcccttt ctgacgcagg atctcataaa gctgaaaggc
     4561 gtaagcggtg ttgacggcgt cgacagcaac cgtcttaccc ttgatatcgg ccaaggacgt
     4621 gatttccggc tgcacaatga gatggttgaa gctgttgtcc cctcctaaca ccacggcgat
     4681 atcgacgttc gccttgtcct tcagcgcgaa ggcattgtcg acggccgaat gtgcaatctg
     4741 gtagcgccct tccgcgagcc cgttgcgcag ctcgtcggaa ttgggagtga attttatttc
     4801 gacattgaga ccgcgcttgg catagaggcc tttcgcctgc gctgcaaaca tcggcaggtt
     4861 ctgcacgccc ggaaacacga tgacggcaag cttggcatcc tgggcgcgcc catgttgagg
     4921 cgacaggaaa agaac
//
LOCUS       DATDHO010000596         3046 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_425393, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000596 DATDHO010000000
VERSION     DATDHO010000596.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3046)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3046)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3046
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425393"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..287
                     /locus_tag="VIY07_11435"
     CDS             <1..287
                     /locus_tag="VIY07_11435"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEY6382400.1"
                     /translation="AGVYRYDQLIVLQRTGMPAVLLEAGSIINREEELRMGSVERQAL
                     ISAAVTNAVESFCAARRPRTPTNEAKRAGGVSRQATAPTDVAPVRAIKQR"
     gene            complement(428..2251)
                     /locus_tag="VIY07_11440"
     CDS             complement(428..2251)
                     /locus_tag="VIY07_11440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011425132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY6382401.1"
                     /translation="MFAATKREQRRFQLILIKPSHYDDDGYVVQWVRAIIPSNTLAVL
                     YSLGRDAAERSVLGADTAIDIKVIDEINSRVRIGSLLSRFRRHGNHGLLAIVGVQSNQ
                     FPRALDIARPFRAAGVPVIIGGFHVSGCLAMLPELPADHKAALDMGVSLFAGELEGRM
                     DTILQDAANGSLSPIYNYLKDLPTLEAEPTPILPARNLRRTIQSLASFDAGRGCPFQC
                     SFCTIINVQGRKSRGRTADDVERTIREHYAHGIRHFFITDDNLARHKNWEPIFERIGA
                     LRNREGMNIKLMVQVDTLCHKIPNFIEAAGRAGVNRVLVGLESINAANLLAAKKHQNK
                     ITEYRKMLLAWKNIGAITTAGYILGFPFDTPESIREDIEIIKKELPLDILEFFILTPL
                     PGSMDHKVLYEKGEWMDSDMNRYDGEHAVSIHPTMSKEVWEEVYQSAWRTFYTREHME
                     TLLRRGAAMKCNQSRLISFIYMFGSSVPIERVHPLQGGVLRRKHRLERRPGMPIEPIW
                     SFYAKYAAEFLTKTAREIRLAYWLGMTARRIRKDPNRFAYTDRALTPVTEDEEETFDL
                     YTHNETARHAVEHARKVAELTGARPRAGAGVGPRRAVAGAS"
     gene            complement(2735..>3046)
                     /locus_tag="VIY07_11445"
     CDS             complement(2735..>3046)
                     /locus_tag="VIY07_11445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEY6382402.1"
                     /translation="SAAELRHGPRASITPSTPVLVLRQNDQAATAIDELVHDLKNAGE
                     KVFIAGGAAGTLPWIGDGHPVCDPVTMLIPAYRAIEAAARRQGFDPDNPPHLSKVTQT
                     L"
BASE COUNT          594 a          913 c          937 g          602 t
ORIGIN      
        1 aagcgggtgt ctaccgctac gaccagctga tcgtgctcca gcgcaccggc atgcctgcgg
       61 tcttgctgga agcgggctcg atcatcaacc gcgaggagga gctacggatg ggctcggtcg
      121 agcgtcaagc gctgataagc gccgctgtga ccaatgcggt cgagtcgttc tgtgcggcac
      181 gccgaccgcg cactccgacc aatgaggcaa agcgggccgg cggggtatcg aggcaggcga
      241 cagcgccgac cgacgtagcg ccagtacggg caatcaagca gcgctaatct gtctcatcca
      301 catttgcgag caggctcgcc cgcatctttt gctaagtccg tgaaaaacaa agaaggtgtg
      361 acagctcccg ggcccaccac tcaaaaaaat cggcttatcg agggggcgcc agagtcagcg
      421 cgccatatta gcttgcaccc gcgacggcgc gtcgtggccc aactcccgcc ccagcgcgcg
      481 gccttgcgcc ggtcagctca gcgaccttgc gcgcatgctc cacggcgtgg cgcgcggttt
      541 cgttgtgggt gtaaaggtcg aacgtctcct cctcgtcctc ggttaccggg gtcaaggccc
      601 gatcggtata ggcaaatcgg ttcgggtcct tccttatgcg ccgcgcggtc atgccaagcc
      661 agtacgccaa gcgtatttcg cgcgcggttt ttgtgagaaa ttccgcggcg tatttcgcat
      721 agaacgacca gatcggctcg atcggcattc cggggcggcg ctccagccgg tgcttgcggc
      781 gaagcacgcc gccctgcagg ggatgaacgc gctcgatcgg aacggacgag ccgaacatgt
      841 aaataaacga tatcagccgc gactggttgc atttcatggc ggcgccgcgc cgcagcagcg
      901 tttccatgtg ctcgcgcgtg tagaaggtcc tccaggcgct ctgatagact tcttcccaca
      961 cttccttgct cattgtcgga tgtatcgaca cggcatgctc gccgtcgtag cggttcatgt
     1021 ccgagtccat ccactccccc ttctcgtaaa ggaccttgtg gtccatcgag ccaggcagcg
     1081 gcgtcaagat gaagaattcg aggatgtcga gcggcaactc cttcttgata atttcaatgt
     1141 cttcgcggat cgactcaggc gtatcgaatg gaaagccgag gatgtagccg gccgtggtga
     1201 tcgcgccgat gttcttccag gcgagcagca tcttgcggta ttcggtgatc ttgttctgat
     1261 gcttcttcgc cgcgagcaga ttggcggcgt tgatgctttc gagaccgacc agcacgcgat
     1321 tgacgccggc gcgtcccgcc gcttcgatga agttgggaat cttgtggcag agcgtgtcga
     1381 cctgcaccat cagcttgatg ttcatgcctt cgcggttgcg caacgcgccg atacgctcga
     1441 agatcggctc ccagttcttg tggcgcgcaa gattatcgtc agtgatgaag aagtgacgga
     1501 tgccatgagc gtaatgctcg cggattgtcc gctcgacgtc atcggccgtg cggccgcgcg
     1561 acttgcgacc ctggacattg atgatggtgc agaacgagca ctggaagggg cagccgcggc
     1621 ccgcgtcgaa gctcgcgaga gactggatcg tccgcctcag attcctcgcg ggaagaatcg
     1681 gcgtgggctc ggcctcgagt gtcggcaaat ccttcaagta attataaatc ggactcagac
     1741 tcccgttcgc tgcatcctgc aggatcgtgt ccatccgccc ttccagttcg ccggcgaaca
     1801 ggctcactcc catatcgagc gcagctttat gatcggcagg cagttcgggc agcattgcga
     1861 ggcaacccga cacgtggaag ccgccgatta tcacgggaac gcctgccgcg cggaacgggc
     1921 gcgcgatgtc gagagcgcgc gggaactggt tcgactgcac gccgacgatg gcgaggagcc
     1981 cgtgattgcc atggcggcgg aatcgggaga gcagtgagcc gatcctgacc cggctgttga
     2041 tctcgtcgat cactttgatg tcgatggcgg tgtcggctcc gagcacactc cgctcggctg
     2101 cgtcccgccc gaggctgtag agcaccgcga gcgtgttgga cggaatgatg gcgcgcaccc
     2161 actggacgac gtaaccgtca tcatcgtaat gggacggctt gatcagaata agttgaaatc
     2221 gccgctgttc gcgcttcgtc gcagcaaaca tccccacccc cggccgcaga ccagttagca
     2281 ccccctccaa ctccgccagc aagttagagg aagttcaggg tcagagcaaa cgacgaacga
     2341 tccgacgcga ccttttgccc aaaaaaagga actggcatcg ctaaacgtcg aatcagcgcg
     2401 tgaaaaagca cgaactggac cgcgatcggt cggaaattga aaaaatctgt aggattgtct
     2461 gtgcaatcaa taccgtcgag tgaaactcct ccgctcgacg gaactgggcg tcatgttgag
     2521 tcgcagagcc ccgcttctcc catcagcccg ataccattcg catggggaag ataatgggga
     2581 aaccgacgat atcgtccccg ttcattcccg cgtgagcggg aatccagtct tgcttggaac
     2641 tgggtccccg cattcgcggg gacgaacggt gtgaattgtg cctttgtgct tccgacgagc
     2701 agttgcacgc gaaggcttcg gtcctttcgg ccgatcacaa tgtctgcgtc actttgctga
     2761 ggtgaggggg attgtcgggg tcgaagccct gcctccgcgc agccgcttcg atggcgcgat
     2821 aggccgggat cagcatagtg acaggatcgc aaaccgggtg accgtcgccg atccatggca
     2881 gcgttcccgc cgcgccgccg gcgataaaga ctttctcgcc agcattctta aggtcatgaa
     2941 cgagctcgtc gatggccgtg gcggcctggt cgttctgtcg cagcaccagc accggtgttg
     3001 acggcgtgat cgatgcgcgc ggcccatgcc gcagctcggc cgcgct
//
LOCUS       DATDHO010000597         2183 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_28523, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000597 DATDHO010000000
VERSION     DATDHO010000597.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28523"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..773
                     /locus_tag="VIY07_11450"
     CDS             <1..773
                     /locus_tag="VIY07_11450"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6382403.1"
                     /translation="TNAAQAMQANGCIRITVDQKDLAASLPLSHGELAPGRYVCLAVI
                     DNGTGFDEDVARRLFEPFFTTRLAGTGLGLATVHEIIRDYDGAMNVQSKPGHGSRFEA
                     WLPATPPNTVGADPAMLPLGRGETVLVVESERERLLHEEEMLAALGYEPVGFERVADA
                     VAACRSAPGRFDIVLVSHASQTRVGLDLARALHEVAPQLPILLAAASTIDVGVDALAE
                     AGISELLRRPLVSTEVAGALARCLRSQARYDRNTIAGG"
     gene            933..1373
                     /locus_tag="VIY07_11455"
     CDS             933..1373
                     /locus_tag="VIY07_11455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3455 domain-containing protein"
                     /protein_id="HEY6382404.1"
                     /translation="MAQVPATVAATDGTRVATFQAEGAQIYECKIGSDGNLNWVFREP
                     IATLLLNDKTVGRHYAGPTWEDMDGNAVTGKAVADAPGTTPNDIALLKLDVVSHRGSG
                     TLANVATVLRLNTHGGVAQGACDKAGVFLSVPYSATYIFLRKGG"
BASE COUNT          468 a          597 c          645 g          473 t
ORIGIN      
        1 gcaccaatgc cgcgcaagcg atgcaggcca atggatgcat ccgcatcact gttgatcaga
       61 aggacctggc tgcttctctc ccattgagtc acggcgagct cgcaccaggc cgttacgtgt
      121 gcctggccgt catcgacaac gggactgggt ttgacgaaga tgtggcgcga cgattgttcg
      181 agccgttctt tacgacccgc ttggctggga ctggtctggg cctcgcaacc gtgcacgaaa
      241 tcattcgtga ttatgatggc gcgatgaacg tgcagagcaa accagggcac ggaagccgct
      301 tcgaggcgtg gctccctgcg acgccgccga acactgtggg cgccgacccg gcgatgctgc
      361 cgcttggccg cggcgagacc gtgttggtcg ttgagagcga acgcgagcgg ttactgcatg
      421 aagaggagat gctggcagcg ctgggatacg agcctgtggg gttcgagcgc gtggccgatg
      481 cggtcgcggc gtgtcgttcg gcgcccggcc ggtttgacat cgttctggtt agccatgcgt
      541 cgcaaactcg agttgggctg gatttggctc gtgcactgca cgaggtcgca ccgcagctgc
      601 caattttact tgccgccgca tccacgatcg acgtcggcgt ggatgcattg gcggaagctg
      661 gaatttccga gctcttgcgt aggcccctgg tcagcaccga agtggctgga gcactggcgc
      721 gctgccttcg ttcccaagca cgttacgacc gtaacacaat tgccggtggc tgaaatactt
      781 ctgtagcgcg accgtgccat tttcttgtga ccatcgtaac cgcgcaaatt cctgcgccac
      841 gcgggagtaa cgaggaggac gcggcaatgc tgaggaatat ttgttcattt gtgctgacgg
      901 tcgtgaccgc cgccttttat gtgagcagcg cgatggcgca agtgccggcg acggttgcgg
      961 caaccgatgg gacaagggtc gcgaccttcc aagccgaagg ggcgcaaatc tacgagtgta
     1021 agataggcag cgatggaaac ctcaattggg tgttccgaga gccgatcgca acgctgctcc
     1081 tcaacgacaa gaccgtcggc cgccattacg ccggcccgac ctgggaggat atggacggca
     1141 acgccgtgac cggcaaggct gtcgccgatg cgcccggcac gactccgaac gatattgcct
     1201 tgctcaaact agacgtcgtc agccaccgcg gcagcggcac attggcaaat gtcgcgacag
     1261 tgctgcgact caacacgcat ggcggggtcg ctcaaggcgc atgcgacaag gctggcgtgt
     1321 ttcttagtgt gccttactcc gccacttata tttttctgcg caagggcggc tgatcctcgc
     1381 taggatgtcc gactctttgc gttattgcag cttctttaga ttttgttcga cgcgtaacgg
     1441 cgcgatccct tgcgggtctt tagcaaaatg gcttcgctac agatcgacga aaacaacatg
     1501 agggcggtgg cactatcgca acgggtgctg tcgcaagacc tggcgcgacc ttattacata
     1561 ggattcttta atcatctgcg ggggccgata ttaatcgact cgataccatg cagacatgtt
     1621 cagctccgtt gtcctgtcgt gttagttcgc gcttaacaca ggtgcagttt aagcgacgct
     1681 aggcaggggc aattaaagag ccggacagga aggcgtcaaa caaaccgtcg gcagcccctg
     1741 ccgatgcgag gaacatctat catgtccttt tggcccagca acaccaagaa attcgagcac
     1801 tcacgcccaa taattgaatg cgcccaatgt ggcgagtggc tgttcgggcc agaatggtcg
     1861 gaatacatcg atgagcgcta cgttcggcat ctttggaggt gcgagccatg ctgttatgta
     1921 tttgagacaa ccgtttcgta tgctaggggg gactgaagca tcgcatattc gcgagtgaca
     1981 gatatgcgat tatgaaccat cgatttgtga gctggttctg caaacgccaa gaagttttca
     2041 atcaaaacgc acggccgaaa tcactcatct aatcggccat gtcctttccg acgacgatta
     2101 tgaattcgca ggagcccaca acttaatcaa aatttcacca tccgttaaaa ggtcaagcaa
     2161 ccttcatttg accgccggaa tat
//
LOCUS       DATDHO010000598         2411 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_471090, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000598 DATDHO010000000
VERSION     DATDHO010000598.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471090"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            159..1328
                     /locus_tag="VIY07_11460"
     CDS             159..1328
                     /locus_tag="VIY07_11460"
                     /EC_number="2.7.7.60"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase/2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase"
                     /protein_id="HEY6382405.1"
                     /translation="MALVAAVVVAAGQGLRAGGEVPKQFRRVGGQTLLEHALTAFVRV
                     SQIALVQPVVRKDDLQLVRTLIGNMEILAPVSGGTTRQASVRAGLEALQPHAPDIVLV
                     HDAARPFTSASLIARAIEAAEQTGAAIPALPVTDTVKRVDATGTIETTLDRNTIRLVQ
                     TPQAFRFHALLDAHRRAASQGREDFTDDAALAEWAGMKVSVFEGDLGNIKLTTPEDFL
                     RAEGQQLAALGDVRIGSGLDVHAFGPGDHVTLAGVRIPNDKALTGHSDADVALHALTD
                     AVLGALADGDIGTHFPPSDPQWRGASSDRFLAFAVERVRARGGRIAHLDLTVVCETPR
                     ISTHRESMRANIARIAGVDLERVAVKATTSEKLGFTGRGEGIVAYATATVRLPWD"
     gene            1334..1858
                     /locus_tag="VIY07_11465"
     CDS             1334..1858
                     /locus_tag="VIY07_11465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEY6382406.1"
                     /translation="MSDKELRAAAVALLDLCKGKKLTLATAESCTGGLVAATLSEIPG
                     SSLVLDRGFVTYSNKAKQQMLGVTPATIDFYGAVSTECAEEMAKGALAHASVDLAISV
                     TGIAGPTGAVLGKPIGLVYFCAASRSGRVIAHDRKYGDIGRSNVRRASVLQAFSMLQE
                     LAEKEEPRPPAGKS"
     gene            2007..>2411
                     /locus_tag="VIY07_11470"
     CDS             2007..>2411
                     /locus_tag="VIY07_11470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEY6382407.1"
                     /translation="MKRREFLQAAGLGAAAAAVTAPAIAQSLPEIKWRLTASWPKSLD
                     TLYGGCEYFSKRIAEITDNKFQIQVFAAGEIVPGLQVLDAVQSGTVEMGSTAMYYYWG
                     KDPAFTFGTALPFGLNSRQMYSWLHFGGGNELL"
BASE COUNT          463 a          741 c          746 g          461 t
ORIGIN      
        1 aggctgcccc tttcattgct cagagattag ccatttcgcg ccgccgcgca agtgctgcat
       61 tgcaaaaaaa gttcatcctt aagaacgctc ggcttatcag gcgcgtttgc gggccgccta
      121 gaacgcggta aagcaaaaac agacctgagg agtaacgtat ggcgcttgtt gcagccgtcg
      181 tggtggccgc tgggcaaggc ctgcgagcgg gtggcgaggt accgaagcag tttcgccgcg
      241 tgggcggcca aacactgctc gagcatgccc tcaccgcatt tgtaagagtc tcccaaatcg
      301 ctttggttca gcctgtcgtc cgcaaagacg atctgcagct cgtgcgaacc ctgattggca
      361 acatggagat tctcgcgccc gtgtcaggcg ggacgacgcg tcaggcttcg gtgcgcgcag
      421 gtcttgaggc gctgcagccg catgctcccg acattgtgct cgtccacgac gcggccaggc
      481 ccttcaccag cgcaagtctg atcgcgcgcg ccatagaggc ggcagaacaa accggcgcag
      541 ccatccctgc gctgccggta accgacaccg tcaagcgcgt tgatgcaact ggcaccattg
      601 aaacgactct cgatcgtaac acgatccggc tcgtgcagac tccgcaggca tttcgctttc
      661 atgccctgct tgacgcacat cgtcgcgcgg catcccaggg ccgcgaggac tttaccgacg
      721 atgctgcctt ggccgaatgg gccggcatga aggtcagtgt gttcgaaggc gacctcggca
      781 acatcaagct cacgacgccg gaggattttc tgcgcgcgga aggtcaacaa cttgccgctc
      841 tcggcgatgt tcgcatcggc tcgggattgg acgtccacgc gttcggtccc ggcgaccacg
      901 tcaccctcgc gggggtacgc attccaaatg acaaggcgct caccggacat tccgacgccg
      961 acgtcgcgct ccatgcgctt acggacgcgg tgctcggtgc tctcgcggat ggcgacattg
     1021 gcacgcactt cccgccatcc gatccacaat ggcgaggcgc gtcgtccgac cggtttcttg
     1081 ctttcgccgt cgaacgagtg cgggcccggg gtggccgcat cgctcacctc gatctgacag
     1141 tggtttgcga gactccacgc atctcgacgc accgcgaaag catgcgcgcg aacatcgcga
     1201 gaattgccgg cgtcgacctc gagcgcgtgg ccgtgaaggc gacgacaagc gagaaactcg
     1261 gattcaccgg acgcggtgaa ggcatcgtcg cctacgcgac ggcaaccgtt cgcctgccgt
     1321 gggactgacc gccatgtccg acaaagaatt gcgcgctgct gctgttgccc tgttggacct
     1381 ttgcaaaggg aagaagctca cgctggcgac ggcggagtcc tgcaccggcg ggctggtcgc
     1441 cgccacgctg agcgaaattc ccggttcgtc cctggtcctc gaccgcggct ttgtgaccta
     1501 ctcgaacaag gcgaagcagc aaatgcttgg tgtgacgccg gcaacgatcg atttctatgg
     1561 cgcggtgagc accgaatgcg ccgaggaaat ggcgaaaggc gcgctggccc atgcctcggt
     1621 cgatcttgcc atttcggtta caggcattgc cgggccaacc ggggcggtgc tcggaaagcc
     1681 cattggcctc gtctattttt gtgctgcatc gcgcagcggc cgcgtcatcg cgcacgatcg
     1741 gaaatacggc gatatcggcc ggtccaacgt gcgccgtgca tcggttttgc aggcattttc
     1801 catgcttcag gagctggcgg aaaaggaaga gcctcgtccg cccgcgggaa aaagctaggg
     1861 caataaagcc ggtgagttcg ggctttctct ttgcccgcac tcgcgtaaga tcgtccccgt
     1921 cggtcgccga aatgaaggcg aacttgaata ttcagtggtg aaatctcctt cggtcggcgg
     1981 gccggcgtca acgaggggaa acgccaatga aacgtcgtga attcttgcaa gctgcaggtt
     2041 tgggggccgc cgcagccgct gttaccgcgc ccgcgattgc gcaatcgttg ccggaaataa
     2101 aatggcgatt aacggcgagc tggccgaaat cgctcgatac gctctacggc ggatgcgaat
     2161 acttctcgaa gcgcattgcc gaaatcaccg ataacaaatt ccagatccag gtgttcgccg
     2221 ctggcgagat cgttccgggc ttgcaggttc tcgatgccgt gcagagcggc acggtcgaga
     2281 tgggcagcac cgccatgtat tactactggg gcaaggatcc ggccttcacg ttcggcacgg
     2341 cgctgccgtt cggcctcaac agccgccaga tgtattcgtg gctgcacttc ggcggcggca
     2401 acgagctgct c
//
LOCUS       DATDHO010000599         2240 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_375631, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000599 DATDHO010000000
VERSION     DATDHO010000599.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375631"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..625
                     /locus_tag="VIY07_11475"
     CDS             <1..625
                     /locus_tag="VIY07_11475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019994497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HEY6382408.1"
                     /translation="IKAIRESGVKNLTIVSNNAGIDGAGLGLLLETRQVKKMISSYVG
                     ENKLFAQQYLAGELEIEFNPQGTLAERIRAGGAGIPAFFTRTGAGTDIAKGKDEREFD
                     GQRYIMERGIVADLSIVHAWMADTEGNLVYRKTARNFNPMMATAGKVTVAEVEHLVQP
                     GDMNPDHIITPGVYVQRMVHVPNAVKHIEQRTVRKREAAPAGTGEEV"
     gene            625..1275
                     /locus_tag="VIY07_11480"
     CDS             625..1275
                     /locus_tag="VIY07_11480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit B"
                     /protein_id="HEY6382409.1"
                     /translation="MPWTRDQMAERAAKELRDGFYVNLGIGIPTLVSNYIPGGMTVQL
                     QSENGMLGFGPFPYEGEEDPDLINAGKQTVTELPTTSYFSSADSFAMIRGGHIDLSIL
                     GAMQVAENGDLANWMIPGKMVKGMGGAMDLVAGVKKVVVVMEHTAKDEPKLLHRCKLP
                     LTGAGVVDMVITDLGVFTIDKKTGGMTLIELAPDVTLDEITKKTEASFKVDPKLRH"
     gene            1441..1620
                     /locus_tag="VIY07_11485"
     CDS             1441..1620
                     /locus_tag="VIY07_11485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382410.1"
                     /translation="MIIAILLIVGGILGIVLPVLGFWMVPLGLALLAIDVPFLRGPFA
                     RLLAFINRKLASQAG"
     gene            1696..>2240
                     /locus_tag="VIY07_11490"
     CDS             1696..>2240
                     /locus_tag="VIY07_11490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008596241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioate hydratase"
                     /protein_id="HEY6382411.1"
                     /translation="MLSDAERKKAADILMAAQKDRKQATQLHITFPNITIEDSYAIST
                     EVAQRKVKAGARLIGHKVGLTSKAMQRSSMIDEPDYGYILDDQLIADGAKVKHSDFCK
                     PRVEVELAFIMGKRLAGPGVGLTDVLRATEYVIPAIEIVDARLQDQRKIVDTVADNGA
                     AAGIATGGRPVGPMDVDLRWVG"
BASE COUNT          483 a          654 c          685 g          418 t
ORIGIN      
        1 gatcaaggcg atccgcgagt ccggggtgaa aaatctgaca atcgtgtcca acaacgctgg
       61 catcgatggc gcgggccttg gcttgctgct cgagacccgc caggtcaaga aaatgatctc
      121 gtcctatgtc ggagagaaca agctgttcgc gcagcagtat cttgcgggcg agctcgagat
      181 tgaattcaac ccgcagggca cgctggccga acgcatccgc gccgggggcg ccggtatccc
      241 ggcgttcttc acgcgcaccg gcgccggcac cgacatcgcc aagggaaaag acgaacgcga
      301 attcgacggc cagcgctaca tcatggagcg cggcattgtt gccgatcttt cgatcgtgca
      361 cgcctggatg gccgataccg agggaaatct cgtgtatcga aagacggccc gcaatttcaa
      421 tccgatgatg gcgactgccg gaaaggtgac cgtcgccgaa gtggaacatc ttgtgcagcc
      481 gggagacatg aatcccgatc acatcattac acccggcgtc tacgttcaac gcatggtcca
      541 cgtgccgaat gcggtgaagc acatcgagca gcgcaccgtg cgcaagcgtg aagccgcgcc
      601 ggccggaacc ggagaggaag tctgatgccc tggacccgcg accaaatggc cgaacgcgcg
      661 gccaaggaat tgcgcgacgg tttctatgtc aatctcggca tcggcatccc cacgctggtg
      721 tcaaattaca ttcctggcgg catgacggtg cagctgcaga gcgagaacgg catgcttggc
      781 ttcggcccat tcccctacga aggcgaggaa gatcccgacc tcatcaatgc cggcaagcag
      841 acggtcacag agttgccgac gacgagctat ttttcgtcgg ccgactcgtt cgcaatgatt
      901 cgtggcggcc atatcgatct ctccatcctc ggagccatgc aggttgcgga gaacggagat
      961 ctcgccaact ggatgatccc cggcaagatg gtcaagggga tgggcggagc catggacctc
     1021 gtcgcgggcg taaagaaagt cgtcgtggtg atggagcaca ccgccaagga cgaacccaag
     1081 ctcctccacc gctgcaagct gccgctgacc ggggccggcg tggtcgatat ggtcatcacc
     1141 gatcttggcg tcttcaccat cgacaaaaag accggcggta tgactcttat cgagcttgca
     1201 cccgacgtca cgcttgacga gatcacaaag aagaccgagg cgagcttcaa agtcgacccg
     1261 aagctgaggc actagcgcgc aggcctcggg ttggaacaaa cggtcccgtc cggttttagt
     1321 cgttccatgg atcggagcga taaattcaat agcgaattgg accgccttga agggcatctg
     1381 ccggattggg cgaggggacc gtttcagcgc gcgcgaactc cccgagctat gtggacgcgc
     1441 ttgattattg ccatattgct gatcgttggc ggaatcctcg gcatcgtctt acccgtcctg
     1501 ggcttctgga tggtgccgtt gggactcgcg ctacttgcga tcgatgtgcc ctttctgcgc
     1561 ggccccttcg cgcgactgct cgctttcatt aaccgcaaac ttgcgtcgca ggccggctga
     1621 gagccgcgcc actcccattt gattttcccc aaggaggcgg tacaggatcg cctcgaccac
     1681 ggccaagggg gaaacatgct gtccgacgcc gagcgcaaaa aggctgctga tattttgatg
     1741 gcggcacaga aggaccgaaa gcaagcaacg cagctgcaca tcacatttcc caacatcacc
     1801 atcgaggact cctatgcgat ctcgaccgag gttgcgcagc gcaaggtcaa ggccggggcc
     1861 aggctaatcg gccataaagt cgggctgact tcgaaagcga tgcagcgatc gtcgatgatc
     1921 gacgagccgg actatggcta catcctcgat gaccaactga ttgccgatgg cgccaaggtc
     1981 aagcattccg acttttgcaa gccgcgtgtc gaggtcgaac tcgccttcat tatgggcaaa
     2041 cggttggcgg gacctggcgt cggtctgacc gatgttttac gcgcgacgga atatgtgatc
     2101 cccgcgatcg agatcgtcga tgcgcgcctg caagatcagc gcaagatcgt cgatacagtt
     2161 gcggacaacg gtgccgcggc cggcatcgcg acgggcgggc gaccggttgg accgatggat
     2221 gtcgatctgc gctgggtggg
//
LOCUS       DATDHO010000600         1788 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_375634, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000600 DATDHO010000000
VERSION     DATDHO010000600.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375634"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VIY07_11495"
     CDS             complement(<1..199)
                     /locus_tag="VIY07_11495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HEY6382412.1"
                     /translation="MAHPAHAEHVHHDHHPAGIGRWLFSTNHKDIGTMYLVFAGIMFF
                     LGGVMALVIRTELFEPGLQFVD"
     gene            complement(281..1024)
                     /gene="coxB"
                     /locus_tag="VIY07_11500"
     CDS             complement(281..1024)
                     /gene="coxB"
                     /locus_tag="VIY07_11500"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HEY6382413.1"
                     /translation="MAEPWQLGFQTAASPIMEQITSFHTYVTIIITLIALFVLALLIY
                     VIVRYNERANPQPSRATHNTALEIAWTVIPVLILVAIAIPSFRLLFAQYDFPKADLHI
                     TATGSQWYWSYEYPDHGITFDSIMVPEADLKEGQPRLLTVDREVVVPVGKNVIVGLKS
                     NDVIHDWAVPAFGVKLDAVPGRLQSTWFRAEREGIYYGQCSELCGRNHAFMPIAVRVV
                     SEEEFNDWLAKTKAASAKDDPRHLAAAQE"
     gene            1496..>1788
                     /locus_tag="VIY07_11505"
     CDS             1496..>1788
                     /locus_tag="VIY07_11505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382414.1"
                     /translation="MSRISACLRRRPHSPWLASFFTQVERARQRLIGAGRGGRLSGLL
                     PPQALVAGFGLALFVIAGLAGRAEAGAAGRAEAGAASEAAPAATGPGSVVRET"
BASE COUNT          310 a          544 c          577 g          357 t
ORIGIN      
        1 gatcgacgaa ctgcagtccc ggctcgaaca gctcggtgcg gatcaccagc gccatcacgc
       61 cgccgaggaa gaacatgatc cccgcaaaca ccaggtacat cgtgccgatg tccttgtggt
      121 tggtcgagaa gagccaacgc cctatccccg ctggatggtg gtcgtgatgg acgtgttcgg
      181 catgggcggg atgtgccatg gctgtctttt cctatgtcgt ctcggtcatc ggttgattcg
      241 gttcacagct tttgtcggcg cggttcgcgc gcgatttaag ttactcctgg gccgctgcca
      301 gatggcgcgg gtcgtctttg gccgaggctg ccttggtctt ggcgagccag tcgttgaact
      361 cctcctccga aacgacgcga acggcgatcg gcatgaaggc atggttgcgg ccgcatagtt
      421 ccgagcactg gccgtaatag atgccctcgc gttcggcccg gaaccaggtc gactgaagcc
      481 gtcccggcac cgcgtcgagc ttcacgccga aggcgggaac cgcccagtcg tggatcacgt
      541 cgttcgattt caagccgacg ataacgttct tgcccaccgg cacgaccact tcgcggtcaa
      601 cggtgagaag ccgcggctga ccttccttca ggtcggcttc cggcaccatg atcgaatcga
      661 aggtgatgcc gtggtccgga tattcgtagc tccagtacca ctgactgccg gtcgcggtga
      721 tgtgcaggtc ggctttgggg aagtcgtatt gggcgaagag gagccggaag gacggaatgg
      781 caatggcgac cagaatgagg accgggatca cggtccaggc aatctcgagc gcggtgttgt
      841 gcgtggcgcg cgagggctgc ggattggcgc gctcgttgta ccgcacgatc acgtagatga
      901 gcagggcgag aacgaacagc gcgatcagcg tgatgatgat ggtgacataa gtgtggaacg
      961 aggtgatctg ctccatgatc ggcgacgcgg cagtttgaaa gccgagttgc cagggctcgg
     1021 ccatcccgac cccgtctttg gcacgggcgc cgccgcacag agcaaagctt gctgccgcag
     1081 cacatgccgt cgtcatttta ttgcagattg ccatccttcc actcccaaac ccttatcgcc
     1141 cgtcgccgac tcgccagcac aattcggggc gcagtcgcaa atttttgagg cgcgggcggc
     1201 ctcaaggctg cctacgccgc tcgatggaag caagggcggc gcggaagttc aacagcgata
     1261 tagagcgtcg cccccaccgt tggtttttat gtgccaagcc cagactttgc gtcgcccgag
     1321 ctttggacct tttccggtgt tcaaatcata aagaaaatcg gttggcaaca ctcatcattc
     1381 gggggcaagc tgcggcataa gcacctcaat tgcgccggcc atcccgcgtt gggctgagat
     1441 gccgggccag ttaacgccga aatttggccc caaaactcgg cgatggcggt tttccatgtc
     1501 gcgcatctcc gcttgtctgc gccgccgccc ccattctcct tggcttgcga gctttttcac
     1561 tcaagttgaa cgcgcgcggc agcgtctaat cggcgctggg cgcggcgggc gcttatccgg
     1621 ccttttgccg ccccaggcct tggttgccgg gttcgggctc gcgctattcg tgattgccgg
     1681 cctcgcgggc cgggccgagg cgggcgccgc cggccgggcc gaggccggcg ccgcttccga
     1741 ggctgccccc gcggccacgg ggccgggcag cgtggtgcgg gagaccca
//
LOCUS       DATDHO010000601         1676 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_375665, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000601 DATDHO010000000
VERSION     DATDHO010000601.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1676
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375665"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(147..1070)
                     /locus_tag="VIY07_11510"
     CDS             complement(147..1070)
                     /locus_tag="VIY07_11510"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY6382415.1"
                     /translation="MAAIAPAPDIVFSTGCRLVQRIALRFFGVTISPIEQSRDPKQFA
                     AFELSGWDSNIGGYDTAFGAVTRQTVQSMLDAARVAPGMQVLDVCSGPGMLAAGVLLR
                     GAEAIGLDFSAEAVEIARRLVPNGRFQRGDAQALPFAEASFDAVLCGYGLMHVPQPAL
                     AMREMLRVLRPGGRAALSVWDASGFGFSLVYEAVRARGNMEIALPHGPDFFQFGSPER
                     MQQALAEAGFADAAAYSFQQEWHVADADRYIESILTGTVRARAILAAQSGAAADGVRS
                     FIGDYLTRFRAPNGELVIPMPAIVGSGARLG"
     gene            complement(1140..1394)
                     /locus_tag="VIY07_11515"
     CDS             complement(1140..1394)
                     /locus_tag="VIY07_11515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382416.1"
                     /translation="MGVTLRATTLIVATAVVTLSSAANAHNRHGAVRGEHWYGRHIRW
                     CSGPSAAFGLPYFYPCGRNRYYYSEGYRRYYSDRYRYYYR"
BASE COUNT          373 a          493 c          502 g          308 t
ORIGIN      
        1 caaaggcttt tctaagccga ccgttccaag ccaggttcct tgaggtcctc ggccgtcagg
       61 tcccgcggag cattaaagag aaagatttgg tttgctgaac ggccggtgcg taggtcgtgc
      121 tcgctcggca aattgggaat cgctattcaa cccaaccgcg caccgctccc gacaatcgcc
      181 ggcatcggta tgaccaattc gccgttaggt gcgcggaagc gagtcaaata gtcgccgatg
      241 aatgaacgca cgccatctgc cgcggcgcct gattgagcgg caagtatggc gcgggcgcgg
      301 actgttccgg taagtatgga ttcaatgtaa cgatccgcgt cggcaacgtg ccattcctgt
      361 tggaaggaat acgcggcagc atcggcaaag ccggcctcag ccagtgcctg ctgcatgcgt
      421 tccggtgatc cgaactggaa aaaatcaggt ccgtgcggca atgctatttc catattgccc
      481 cgggcacgaa ccgcctcata gaccaggctg aatccgaagc cggatgcatc ccaaacactg
      541 agcgcggccc ggccaccagg gcggagtacg cgcagcattt cgcgcatggc caaagcgggt
      601 tgcgggacgt gcatgaggcc ataaccgcag agcaccgcgt caaagcttgc ctccgcgaac
      661 ggcagcgcct gtgcgtcgcc tcgttgaaaa cggccgttgg gcaccagcct gcgggcgatt
      721 tcaaccgcct cggcggagaa gtcgagccca attgcctccg caccgcgtag caacacgccc
      781 gccgcaagca tgccgggacc agaacataca tccagcacct gcatacctgg cgccacacgc
      841 gccgcgtcga gcatcgactg caccgtctgg cgtgtcactg cgccgaaggc ggtgtcatag
      901 ccgccaatat tgctgtccca gcccgatagt tcgaaagcgg cgaattgctt cgggtcgcga
      961 gattgctcga taggcgaaat tgttactccg aaaaagcgga gagcgatgcg ctggactagt
     1021 cggcatccag tcgagaatac aatatctggc gccggcgcga ttgctgccaa tagcgttcga
     1081 actcaagggc acgtcccttg agagcagcgc catctcattc tgctaggccg tagtcgtact
     1141 catctgtagt agtagcgata acggtcgctg tagtagcggc gataaccctc gctgtagtag
     1201 tagcgattac ggccgcaagg gtaaaagtag ggcaaaccaa aggccgccga aggccccgaa
     1261 caccagcgaa tgtgtctgcc gtaccagtgc tcgcctcgga ccgcgccgtg gcgattatgc
     1321 gcgttcgcag cactcgatag tgtgacaacc gcggttgcga cgataagagt tgtggctcgt
     1381 aatgtgacac ccatggctct cgtcctttgg actacattct cagcatagcg gaataagatc
     1441 tcgttgacat catgccgggg cgaagcggac gtgctgcgga taagttgcaa tgtccgcttt
     1501 tgcccccgca agcggacatc aacggcaatg aacggaacgt ttgctatggg cgaaaaagcg
     1561 gacattacgg ccgtgtctcc gccccgaaca ccgcaggcgc cccgggagcg aaaggggcaa
     1621 tgcttggggt ggtgagatcg gaaagcggaa cgctcaactt gcagacaagc ccggtt
//
LOCUS       DATDHO010000602         3278 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_375686, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000602 DATDHO010000000
VERSION     DATDHO010000602.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3278
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_375686"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(260..1954)
                     /locus_tag="VIY07_11520"
     CDS             complement(260..1954)
                     /locus_tag="VIY07_11520"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HEY6382417.1"
                     /translation="MNKRHRKLFNALWLIAAILISSASAQEANKSKPEQASAVVRVDS
                     GQLQGVEADGVISFKGIPFAAPPVGELRWRPPQPTPRWTGVRHAAEFGRSCMQGRGGP
                     PPGAGAPAAATQGAPPAAAPAAQGPSEDCLYLNVWRPADPAARNLPVMVWIYGGGFVG
                     GSSSSPNTSGVQFAKQGVVLVAMNYRVGRFGFFAFPALSSERPNENKGNYAYMDQIAA
                     LHWVQLNIAAFGGNPNNVTIFGFSAGGVSVHSMLASPQARGLFHKAIVHSGGSRDSVL
                     TARPMRADGVDPNYPLSAETIGINFAKSMGIEGTDHAALARLRGLSADEVLRGAPPQP
                     GVTMPSYETTPILDGRLITETAENAYKARRQPRVPLMLGSNSADTAGNRIKARTKDEF
                     FARYGQWSAEAKAAYDPDGTTDFATMVSRANDDFGQAEPARFAANAFAANGSPAYLYM
                     FSYVPTAMREQARAGSPHGGDIPFVFGTLGVGRGGAPTPEDQAISRIAQSYWVNFART
                     GDPNGSGLPTWPRHVAGRDQIFTFRPDGSAGAGPDVRKARLDVTEKATESGKRAAP"
     gene            complement(2097..3251)
                     /locus_tag="VIY07_11525"
     CDS             complement(2097..3251)
                     /locus_tag="VIY07_11525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6382418.1"
                     /translation="MSNLIYNHLRQITLEQAMSNEVLDEGRRRFISASLVAVPGAAVV
                     SSGLPAPGEASAQTKGAGPAKEPMVIGYPNEKGIQIERVTYPARNIGTEIAAYIFKPA
                     GFDNRKKYPSIVVTHPFGGVKEQTSGLYSAFLAEQGFVTLAFDKSYQGESGGEPRLME
                     VPAQHLDDISCSIDFLVRQPFVDPNRIGSLGICAGGSYALGNAPTEMRVKAVATVSMF
                     NLGDARRRAMGLLSYEERMKRLKDAGEQRSKEARGEPARLVQISPESTAEFTENTPTL
                     YREGYDYYMTPRAKHPNSPNRYVFSSLPLQMAFFPFSQVETISPRPILMIVGEKADTR
                     FWSDEVYDQAKEPKEVFVVKGATHIDMYDKRQFVTPAVAKLKEFFDKALK"
BASE COUNT          607 a         1028 c          947 g          696 t
ORIGIN      
        1 gtgcgccacc tacgaacgat cgtcttttct taatttcctc cacttcctga attctttcat
       61 ttggaagtaa cagtccttac ctctggaaga cctcatagct attacactcg gggtccttgt
      121 gggcgccgac cttgccgtta ttcccgaatg gtctagcgtg gcttcggcac cctggcggcc
      181 tgatcggtca ggaccagtcg cgcttttttg ggatcggatt tgctgaccgg ttattcgcac
      241 tggccgtggc tcgctgagcc tagggggcgg ctcgcttgcc cgactccgtg gctttctcgg
      301 tcacgtccaa ccgcgccttg cggacgtccg gccccgcacc cgcggaacca tcgggccgga
      361 aagtgaagat ttgatctctg ccggcgacgt ggcgcggcca ggttggcagt cccgatccgt
      421 tcggatcgcc cgtcctggcg aagttgaccc aatagctttg cgctatccgc gagatcgcct
      481 ggtcttccgg tgttggcgcc ccgccgcggc ctacgcccag tgtgccgaag acaaagggga
      541 tgtcgccgcc gtgcggggac cccgctcgcg cctgttcccg catcgctgtc gggacgtacg
      601 agaacatgta caggtatgca ggcgaaccgt tggcagcgaa ggcgtttgcg gcgaagcgcg
      661 ccggctcggc ctggccgaag tcgtcgttgg cccgcgacac catcgtggcg aagtcggtcg
      721 ttccgtcagg gtcgtaggcc gccttcgcct cggcgctcca ctggccgtac cgggcgaaga
      781 actcgtcctt ggtgcgagcc ttgatccggt tgcctgcggt atctgcgctg ttgctgccaa
      841 gcatcagcgg gacgcgcggc tggcggcgag ccttgtaggc gttctccgct gtctcagtga
      901 tcaacctgcc atcaagaatc ggcgtcgtct cgtaggacgg catggtaacc cccggctgag
      961 gcggggcgcc acgaaggacc tcgtcggcgc tgaggccgcg caacctggcc aaagcggcat
     1021 ggtccgtccc ctcgataccc atcgatttcg cgaagttgat cccgatcgtc tcggccgaca
     1081 gcggatagtt cgggtcaacg ccgtccgcac gcatcggccg ggcggtgagc acgctgtccc
     1141 ttgagccgcc ggagtgcacg atggccttgt ggaacagccc gcgcgcctgc ggcgatgcga
     1201 gcatgctgtg gacggacacg ccacccgccg agaacccgaa gatggtgacg ttgttcggat
     1261 tacccccgaa tgcggcgata ttcagctgca cccagtgcaa ggcggcaatc tgatccatgt
     1321 acgcgtagtt gcccttgttc tcattagggc gttcgctgct caacgcagga aacgcgaaga
     1381 aaccgaagcg tccaactcga tagttcatgg cgacaaggac gacaccctgc ttggcgaatt
     1441 gaacgccgga cgtgttaggc gaagagctcg aaccgcccac gaaaccgccg ccgtagatcc
     1501 agaccatcac aggcagattg cgagcggccg gatcagccgg acgccagacg ttcaaataca
     1561 ggcaatcctc ggatggccct tgggccgcag gcgcggcggc cggcggtgcg ccctgtgttg
     1621 ccgctgcagg cgctcccgcg cccggaggcg gcccgcctcg tccctgcata cagctccggc
     1681 cgaattccgc ggcatgtcgc actcccgtcc acctcggcgt cggctgtggt ggtcgccacc
     1741 gcaactcacc gaccggtggc gcggcaaagg gaatgccctt gaaggagatc acgccatcgg
     1801 cctcgactcc ctgcaactga ccgctgtcaa ctctcacgac cgcggacgcc tgctctggct
     1861 tgctcttgtt ggcttcttgt gcgcttgctg aactaataag gatggctgcg atcagccaga
     1921 gcgcgttgaa taattttcga tgcctcttat tcatagagtc cttccgttta ttacatccaa
     1981 aatagccgag cagtcttgca attgaccgcc ccgaaacgta atgctgcaca tcaaggcgac
     2041 aatgaattgc catcccgtcg gccgcgcgat ctcatcaccc ggccggctga tacctgtcac
     2101 ttcaaggctt tgtcgaagaa ctccttcagc ttcgcgactg cgggcgtcac gaactggcgc
     2161 ttgtcgtaca tgtcgatgtg cgtggctcct ttgacgacga agacctcttt cggttcctta
     2221 gcttggtcat aaacctcgtc gctccaaaac ctggtgtccg ccttttcgcc tacgatcatc
     2281 aagatcggtc gcggtgaaat cgtttccacc tggctgaaag ggaagaacgc catttggagc
     2341 ggcagactgg aaaacacgta gcgattgggc gaattggggt gcttggcccg cggcgtcatg
     2401 tagtagtcgt agccctcgcg atatagcgtc ggcgtgtttt cggtaaattc agcagtcgat
     2461 tcgggcgaga tctgcaccaa tcgcgccggt tcgccgcgag cttctttact tcgctgctcg
     2521 ccagcatctt tcaggcgctt cattcgctcc tcataggaca acaaacccat ggcacgacga
     2581 cgcgcgtcgc ccagattgaa catactgacc gtagcaacgg ctttcacgcg catttcagta
     2641 ggcgcattac caagcgcgta gctaccaccg gcgcagatgc ccagcgaacc gatccggttg
     2701 gggtcgacga acggctgccg tactagaaag tcgatcgagc aactgatgtc gtcgagatgt
     2761 tgcgcgggaa cttccatcaa acgcggctca ccgccgctct cgccttgata cgacttgtcg
     2821 aaggccagag tgacgaaacc ctgttcggcc aaaaacgcag aataaagacc cgacgtctgc
     2881 tccttaacgc caccgaaagg atgcgtcacg acgatggacg gatacttctt tctgttgtcg
     2941 aacccggctg gtttgaagat gtaggcggcg atttctgtgc ctatattcct ggccggatag
     3001 gtgacacgct cgatctggat gcctttctcg tttggatagc caatcaccat tggctccttt
     3061 gccggaccgg ccccttttgt ttgtgccgac gcctcccccg gtgccggcaa tccgctgctt
     3121 acaaccgcag ctccaggaac tgcaaccagt gacgcgctga tgaatctgcg ccgcccctca
     3181 tcaagaacct cattactcat ggcttgctcc aaagtgattt gccgcaaatg attgtaaatt
     3241 aagttggaca tactcgggcc ttcgctatct cacgacgg
//
LOCUS       DATDHO010000603         9784 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_326590, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000603 DATDHO010000000
VERSION     DATDHO010000603.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 9784)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9784)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9784
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_326590"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1365)
                     /locus_tag="VIY07_11530"
     CDS             complement(<1..1365)
                     /locus_tag="VIY07_11530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEY6382419.1"
                     /translation="MTNKPRPQLQPGDTRAYPVLPLRDIVVFPHMIVPLFVGREKSIK
                     ALEEVMRSDTFILLATQKNASDDDPSTDAIFEVGTLASVLQLLKLPDGTVKVLVEGTT
                     RAKVLKYTDRVDYYEADASAVADDVGDRVEAEAMARSVVTEFENYVKLNKKVSPEVVG
                     VIQQIEDYAKLADTVASHLAVKISDKQDILETPSVTQRLEKVLGLMESEISVLQVEKR
                     IRTRVKRQMEKTQREYYLNEQMKAIQKELGDEEGRDELQELEDKIKKTKLSKEAREKA
                     THELKKLRQMSPMSAEATVVRNYLDWLLSIPWNKKSKVKKDLTLAEQILDADHYGLEK
                     VKERIVEYLAVQQRANKLTGPILCLVGPPGVGKTSLGKSIAKATGREFVRVSLGGVRD
                     EAEIRGHRRTYIGSMPGKIIQSMRKAKTSNPLFLLDEVDKMGADFRGDPSSALLEVLD
                     PEQNH"
     gene            complement(1681..2958)
                     /gene="clpX"
                     /locus_tag="VIY07_11535"
     CDS             complement(1681..2958)
                     /gene="clpX"
                     /locus_tag="VIY07_11535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEY6382420.1"
                     /translation="MSKVGGSDSKNTLYCSFCGKSQHEVRKLIAGPTVFICDECVELC
                     MDIIREENKSSLVKSRDGIPTPKEIRKVLDDYVIGQDHAKKVLSVAVHNHYKRLNHQA
                     KHNDVELAKSNILLIGPTGSGKTLLAQTLARILDVPFTMADATTLTEAGYVGEDVENI
                     ILKLLQAADYNVERAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKIMEGTI
                     ASVPPQGGRKHPQQEFLQVDTTNILFVCGGAFAGLEKIISARGRSTSIGFGAKVVAPE
                     DRKQGEIFREVEPEDLLKYGLIPEFVGRLPVVATLEDLDEASLKKILVEPKNALVKQY
                     QRLFEMESIDLTLAEEALGAIARKAIDRKTGARGLRSIMEGILLDTMFDLPSLEGVEE
                     VVISKEVVEGTARPLYIYADRSDRTAESGSASA"
     gene            complement(3230..3865)
                     /gene="clpP"
                     /locus_tag="VIY07_11540"
     CDS             complement(3230..3865)
                     /gene="clpP"
                     /locus_tag="VIY07_11540"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEY6382421.1"
                     /translation="MRDPLDTYMNYLVPMVVEQTNRGERAYDIYSRLLKERIIFITGP
                     IEDGVSTLVVAQLLFLEAENPKKEISMYINSPGGVVTSGMAIYDTMQFVRPPVSTLCV
                     GQAASMGSLLLAAGAKDQRFALPNARIMVHQPSGGFQGQATDIMLHAQEILNLKKRLN
                     EIYVKHTGQSLKKIEDALERDYFLTAEAAKDFGLVDKVIDKRPEELLPKPA"
     gene            complement(3963..5315)
                     /gene="tig"
                     /locus_tag="VIY07_11545"
     CDS             complement(3963..5315)
                     /gene="tig"
                     /locus_tag="VIY07_11545"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEY6382422.1"
                     /translation="MQVTETLSEGLKREYKVVVPAAELDAKVNARLDELKTRVRINGF
                     RPGKVPVTHLKRMYGRSAMAEVIEATVRDTNNQIVSERGFRLAADPKVTLPTEEGAIE
                     QLIAGKSDLNYTMALEIVPPITLGDFKSIKLTKLTTDVSDSEVEEGLIRIVEQNKPYM
                     ARPQGEKAAKDDRVTISFAGTIDGTPFEGGSGDDAVVLIGSNTFIPGFEDQLIGVVAG
                     ETRTLKVTFPQHYMKQELAGKAAEFVVTAKTIETPGTVTTDDAFAKSLGLESVAKLRE
                     AVKETIGREHAAMSRQKLKRALLDELDKLHKFEPPPTLVEDEFERVWKSVLSELETEK
                     KTFADEGTTEEKAKAEYRAIAERRVRLGLVLAEIGEKNNITVTEDELRRAVMERARQF
                     AGQEQRVWDYYRQNPQAVAALRAPIFEEKVVDFLLELAGVTETKVSREELYKDDDSTT
                     "
     gene            complement(5408..5492)
                     /locus_tag="VIY07_11550"
     tRNA            complement(5408..5492)
                     /locus_tag="VIY07_11550"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5456..5458),aa:Leu,seq:tag)
     gene            complement(5657..7153)
                     /locus_tag="VIY07_11555"
     CDS             complement(5657..7153)
                     /locus_tag="VIY07_11555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEY6382423.1"
                     /translation="MELLTTDEMAEADRLAMAGGIPGIDLMERAGRTVADATAKMQRQ
                     RVMVVAGPGNNGGDGFVAARCLSEDGFHVRLCFIGEAKALKGDAAVAAARWRGAIEEA
                     SPAALAGGDVIIDALFGAGLRRTVEGLPRLMIGAMNASDIPVVAVDLPSGVNGTSGAV
                     MGTAVNATRTVTFFRRKTGHVLLPGRLHCGIVEVADIGIPARVLEKIRPRTFADSPEL
                     WARSCPRPTLPGHKYSRGHAVIVSGGPSTTGAARLAARGALRAGAGLATIASPREALA
                     INAAQSVAVMVRPVDGAEELGAFLSDKRRNAVVLGPGGGIGAGMREQVFAGLGSQAAV
                     VLDADALTSFSDQPDSLVSAIGRRSNRNIVLTPHEGEFSRLFKDIYKNTQDNSKVEKT
                     RLAAQYCAAIVVYKGADTVIAAPDGRAAIADNAPPSLATAGSGDVLSGIIAGLMAQGM
                     QSFEAACAGVWLHGEAAREFGPGLISEDLPEMLPRVYRRLFSILGADN"
     gene            7413..7751
                     /locus_tag="VIY07_11560"
     CDS             7413..7751
                     /locus_tag="VIY07_11560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEY6382424.1"
                     /translation="MKKIEAIIKPFKLDEVKEALQEVGLQGITVTEAKGFGRQKGHTE
                     LYRGAEYVVDFLPKVKIEIVLGDDMVEKAIDAIRRAAQTGRIGDGKIFVSSIEEAIRI
                     RTGESGIDAI"
     gene            7809..9218
                     /gene="glnA"
                     /locus_tag="VIY07_11565"
     CDS             7809..9218
                     /gene="glnA"
                     /locus_tag="VIY07_11565"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEY6382425.1"
                     /translation="MTTAKDVMKLIKDHDVKYADFRFTDPRGKWQHVTFDVSIIEEET
                     FAEGQMFDGSSIAGWKAIHESDMNLMPDPASACIDPFFAETTVSLVCDVLEPTTGEPY
                     NRDPRSIAKKAEGMVKAQGVGDTIYFGPEAEFFVFDDVKYSATPYNTGFKLDSIEFPT
                     NSDTEYEGGNLGHHIGTKKGYFPVPPQDTAQDMRSEMLAAMAKMGVKVEKHHHEVGSA
                     QHELGMKFSPLTQMADQLMIYKYCIQQVAQIYGKTATFMPKPIYGDNGSGMHCHQSIW
                     KGGKPSFAGNKYADLSEMCLSYIAGILKHARAINAFTNPTTNSYKRLVPGFEAPVLLA
                     YSQRNRSASCRIPYTANPKAKRVEVRFPDPLANPYLAFAAMTMAGLDGIKNKLDPGNA
                     VDKDLYDLPPAELKEIPTVCGSLREALGYLDKDRAFLKAGGVFDDDFIDSYIDLKMTE
                     VIRFEHTPHPVEFEMYYSA"
     gene            complement(9305..9535)
                     /locus_tag="VIY07_11570"
     CDS             complement(9305..9535)
                     /locus_tag="VIY07_11570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382426.1"
                     /translation="MRGTESHTETPSLEFDAARAGAALACAYSNSAEFDAALIAARRA
                     AGVYGPKRHRRQMIASATVIAAGLVLLAFLIG"
BASE COUNT         1939 a         2987 c         2803 g         2055 t
ORIGIN      
        1 gtggttctgc tcgggatcca gcacctcgag caaggccgac gacgggtcgc cgcgaaaatc
       61 ggcacccatc ttgtcaactt cgtcgagcag gaacagcggg ttcgacgtct ttgccttgcg
      121 catcgactgg atgatcttgc cgggcatcga gccgatatag gtgcgccggt ggccgcggat
      181 ctccgcctcg tcgcgcacgc cgccaagcga cacgcgcacg aattcacgtc cggtcgcttt
      241 cgcgatcgac ttgccaagcg aggtcttgcc gacgccggga ggcccgacca ggcagaggat
      301 cggtccggtc agcttgttcg cccgctgctg gacggcgaga tactcgacga tgcgctcctt
      361 gaccttctcc aggccgtagt gatcggcgtc gagaatctgc tcggcgagcg tgagatcctt
      421 cttgaccttg ctcttcttgt tccacgggat cgagagcagc cagtcgagat aattgcgcac
      481 cactgtcgcc tctgcggaca tcggcgacat ctggcgcagc ttcttgagct cgtgcgtggc
      541 cttctctcga gcttccttcg agagcttggt cttcttgatc ttgtcttcca gctcctggag
      601 ttcgtcccgg ccttcctcgt cgccgagttc cttctgaatc gccttcatct gctcgttgag
      661 gtagtactcg cgctgggtct tctccatctg ccgcttgacg cgggtccgga tgcgcttttc
      721 gacctgaagc accgaaattt cgctttccat caggccaagc actttttcga gccgttgggt
      781 gacggacggc gtctccagga tgtcctgctt gtcggaaatc ttgacagcca ggtgcgaagc
      841 gacggtatcg gccagcttgg cgtaatcctc aatttgctgg atcacgccga caacttcggg
      901 cgacaccttc ttgttcagct tcacgtaatt ttcgaattcg gtgaccaccg aacgcgccat
      961 ggcttccgct tccacgcgat cgcccacgtc atcggcgacc gcgctggcgt cggcctcgta
     1021 gtagtcgacc cggtcggtgt atttgaggac tttggcccgc gtggtgccct cgacaagcac
     1081 cttgacggta ccgtcgggca gcttgagcag ttgcagcacg ctcgccagcg tcccgacctc
     1141 gaaaatcgca tcggtcgacg gatcatcgtc cgaggcattc ttttgcgtgg ccagcagaat
     1201 aaaggtgtcg gaacgcatca cctcttccag cgccttgatc gacttctcgc ggccgacaaa
     1261 cagcggcacg atcatgtgcg gaaacaccac gatgtcgcgc aggggcagaa ccggatacgc
     1321 ccgggtgtcg ccaggttgca gctggggtcg tggtttattg gtcattggct ttgtccttat
     1381 gttgtgcccc tgccgaacga cccgcttgtg cggcatcgct cgccagtgcc ggtagggtgg
     1441 gcaaggagac gccgggcgtc tcggcgtgct tgcaggaagg gtacgaaccc ttgccccatt
     1501 cggtaatcag atacgatctc tcgtacgcca gttgttttcg aacgctatac gtatggcgag
     1561 gcatataggt ccgcaagaag cccgcttggc agttaaagcg agtcccttgc tggtaacaac
     1621 cccgcaattc gtacgaatca gcagcctttt cccggatttt ttaatccgcc gaatggcgca
     1681 tcaggcgctt gcgctgcccg attccgcggt gcggtcgctg cggtcggcgt agatatagag
     1741 cggccgcgcc gtcccctcga cgacctcttt ggagatcacg acctcctcga cgccttcgag
     1801 gctggggagg tcgaacatgg tgtcgagcag gatgccctcc ataatggagc gcaggccgcg
     1861 cgcgccggtc ttgcggtcga tcgccttgcg ggcgatcgcg ccaagcgcct cttcggccag
     1921 tgtgaggtcg atcgactcca tctcgaacag tcgctggtac tgcttgacca gcgcgttctt
     1981 cggctcgacc aggatcttct tgagcgaagc ctcatcgaga tcttcaagcg tcgccacgac
     2041 gggaagtcga cccacgaatt cggggatcag cccgtacttg agcagatcct caggctcgac
     2101 ctcgcggaag atttcaccct gcttgcgatc ctcaggggcc acgaccttgg cgccgaagcc
     2161 gatcgatgtg gaccgcccgc gggcagaaat aattttttca agcccagcga aggccccgcc
     2221 gcagacgaac agaatattgg tcgtatcgac ctgcaggaac tcctgctggg gatgcttgcg
     2281 cccgccttgc ggaggcacgg atgcgatcgt gccttccatg atcttcagaa gcgcctgctg
     2341 gacgccttcg cccgacacgt cgcgggtgat cgagggattg tcggatttgc gcgaaatctt
     2401 gtcgatctcg tcgatataca caatgccgcg ctgagcgcgc tcgacgttat agtcggccgc
     2461 ctgcagcagc ttcaggatga tattctcgac gtcctcgccg acgtagccgg cttcggtcag
     2521 ggttgtcgca tccgccattg tgaacgggac gtcgagtatg cgcgcgagcg tctgcgccag
     2581 cagcgtcttg ccagagcccg tcggcccgat cagcaaaatg ttggatttgg cgagctcaac
     2641 gtcgttgtgc ttggcctgat ggttgagccg cttgtagtga ttgtggacgg caaccgataa
     2701 caccttcttg gcgtgatcct ggccgatcac gtagtcgtcg agaaccttgc gaatctcctt
     2761 cggcgtggga attccgtcgc gcgacttgac cagcgaggat ttgttctcct cgcggatgat
     2821 gtccatgcac agttcgacgc attcatcgca gatgaagacg gtcggccccg caatgagctt
     2881 gcgcacttcg tgctggctct tgccgcagaa cgagcagtag agggtgttct tcgaatcgct
     2941 gccgccgact ttgctcattc cattctccgt aacacgcttc cgcacactgc gtggtcggcg
     3001 tcgctccgct caggtactct cacaccaacc aagcaagttt cgcaccggaa ttccagcacg
     3061 gcggcccctg tttcgggaag gaccgcgatc ccgtcgcccc ctggacctta agggaagcat
     3121 gctaacgacg tgataatcaa gattctatta acgataacgc cacactcaca gccgcggaag
     3181 cggccgccgc gtgtcgacaa aagcggtttg gaaccgcctt ggagactcgt caggcaggct
     3241 tcgggagcaa ctcctcaggg cgcttgtcga tgaccttgtc caccaatccg aagtccttgg
     3301 cggcttcggc ggtcagaaaa tagtcgcgct cgagcgcgtc ttcgatcttc ttcagcgact
     3361 gacccgtatg cttcacataa atctcgttga gccgcttctt caggttcaaa atctcctgtg
     3421 cgtgcagcat gatgtcggtc gcctgcccct ggaacccgcc agacggctga tggaccatga
     3481 tgcgggcatt gggcagcgca aagcgctggt ccttggcgcc ggcggcgagc aggagcgatc
     3541 ccatcgaggc ggcctgcccc acgcagagcg tggagaccgg cgggcgcaca aattgcatcg
     3601 tgtcgtaaat cgccatgccg gacgtcacca ccccgcccgg cgagttgatg tacatggaga
     3661 tttctttttt tggattctcg gcttcgagaa acagcaattg ggccacgacg agggtggata
     3721 cgccgtcctc gatcgggccc gtaatgaaga tgatcctctc cttgaggagc cgcgagtaga
     3781 tatcgtaggc ccgctcgcca cggttggtct gttcgaccac catgggcacc aggtaattca
     3841 tgtacgtatc gagaggatct ctcattttgt ctccttgacg cgaatcatac cggctagatt
     3901 agcctcgccg gcgcgtccgg tgatctattt tcccacagag ggcttcgcaa gccgtccgcg
     3961 ggtcaggtgg tcgaatcgtc atccttgtag agttcttcgc gcgagacctt ggtttcggtc
     4021 acgccggcga gctcgagaag gaaatcaacc accttttctt caaagatcgg cgcccgtaag
     4081 gcagcgacag cctgcggatt ttgccgataa taatcccaga cccgctgctc ctgtcccgcg
     4141 aactgacgag cccgctccat cacggctcgc ctcagctcgt cctcggtaac cgtgatgttg
     4201 ttcttttcgc cgatctcggc gagcaccaga ccgagtctca cgcgacgctc agcgatagcc
     4261 cggtactcgg ctttcgcttt ttcttcagtc gtgccttcat cggcaaaagt ctttttctcg
     4321 gtttcgagct cagacagcac cgatttccag acgcgttcga attcatcctc gacgagcgtc
     4381 gggggcggct cgaacttgtg cagcttgtcg agctcatcaa gcaacgcgcg cttgagcttc
     4441 tggcgggaca tcgccgcatg ctcgcgcccg atcgtttcct ttaccgcctc ccggagtttt
     4501 gcaaccgact ccaatccgag cgatttcgcg aaggcatcgt cagtcgtgac tgtgcccgga
     4561 gtttcaattg tcttcgcggt gaccacaaac tcggcggctt tgccggcaag ctcctgcttc
     4621 atgtaatgtt gagggaaagt gacctttaat gtccgggttt cgccggcgac aacaccgata
     4681 agctgatcct caaatcccgg aatgaacgta ttcgagccga taagcacaac ggcgtcgtcg
     4741 ccggatcccc cttcgaacgg cgttccgtcg atcgtgcccg caaaagaaat tgtgacgcgg
     4801 tcgtccttgg ctgccttttc gccctggggt cgcgccatat acggcttgtt ctgctcgacg
     4861 atgcggatga gcccctcttc gacttcggaa tcgctgacat ccgttgtaag tttggtcagc
     4921 ttgatgctct taaaatcgcc aagcgttatc ggcggcacga tctccagcgc cattgtgtag
     4981 ttgagatcgc ttttaccggc gatcagctgc tcgatcgcgc cttcctcggt cggcagcgtc
     5041 accttggggt cggcagcgag cctgaagccg cgctcagaga cgatctgatt attggtatcg
     5101 cgaacggtag cctcaatcac ctcggccatg gccgagcggc cgtacatccg cttgaggtgc
     5161 gtgaccggca ctttgcccgg acgaaatccg ttaatccgaa cgcgagtctt cagctcgtct
     5221 agacgcgcgt tcacttttgc atccagctcg gcggcaggaa cgacaacctt gtattcgcgc
     5281 ttgaggcctt cggacagcgt ttcagtaact tgcatcgcac acactttgtt ctttgcttgc
     5341 actcgcaccg cactcgctca ccatgagccg cgcgttggtt gtggacctta aatctcccgc
     5401 ctcgtgttgg tgcgggcgga gggattcgaa cccccacgac tttcgccact ggaacctaaa
     5461 tccagcgcgt ctaccaattc cgccacgccc gcagagggcc aattacggac gattttggcg
     5521 ccgcaatccg gcacggctta acgcgccggt gcccggcaag gcaagccata accgcaatgg
     5581 ccaagccgtg tcgatctatt acaggcgata agagcaaaat aggcgcttgg cgttttttct
     5641 caatggcaag cactgttcaa ttgtcggcgc cgagaattga gaacagccgc cggtaaaccc
     5701 gcgggagcat ttccggcagg tcctcggaaa tcaggcctgg accgaactcc ctggctgctt
     5761 ctccgtgcaa ccaaacgccg gcgcaggcgg cttcaaagga ctgcataccc tgagccatga
     5821 ggcccgcgat gatgccggaa agcacgtctc cggagcccgc tgtggccagg ctgggtggcg
     5881 cattgtcggc gatcgcggct cggccgtctg gagccgcaat cacggtatcc gcgcccttgt
     5941 agaccacgat agcggcacaa tactgggcag ctaatcgtgt tttttcgacc tttgaattat
     6001 cttgagtgtt tttgtatata tctttgaata agcgtgaaaa ttcgccctcg tggggagtca
     6061 gtacaatgtt tcggttggaa cgacggccta tcgcggacac caggctatcc ggttgatccg
     6121 aaaagctcgt caaggcgtca gcatcgagta ccaccgcagc ctggctgccg aggcctgcaa
     6181 acacctgttc tcgcatcccc gcccctatac ccccgcctgg gcccaggacg acagcatttc
     6241 ggcgcttgtc agacagaaag gcgccgagtt cctcggcccc gtcgaccgga cggaccatca
     6301 ccgcgacact ctgggccgcg tttattgcca aagcctctcg cgggctggca attgtggcga
     6361 gccctgctcc ggcccgtagc gcaccgcgcg ccgccaatcg cgccgccccg gtcgttgatg
     6421 gcccgccaga aacgatcacg gcgtgaccgc gcgagtattt atggcccggc agtgtcggac
     6481 gcgggcaaga gcgcgcccaa agctcgggac tatccgcaaa tgtccgcggc ctgatttttt
     6541 cgagtacgcg cgccgggatt ccgatgtcgg ctacctcgac gatgccgcaa tgtaggcggc
     6601 ccggcagcaa cacatggcct gtcttgcggc gaaagaacgt gacggtccgc gttgcattca
     6661 cggcggtgcc cataaccgca ccgctcgttc cgttgactcc acttggcaga tcgaccgcaa
     6721 cgactggaat atcgctggca ttcatcgcgc cgatcatcag gcgcggcaat ccttcgacgg
     6781 tgcgacggag gcccgcgccg aagagagcat ctatgatgac atcgccaccg gccaaagccg
     6841 caggcgatgc ctcttcaatt gcgccgcgcc agcgggcggc ggcaaccgca gcatccccct
     6901 tcagcgcctt cgcctcgcca atgaagcaga gccgcacatg aaagccatct tcggacagac
     6961 aacgggcagc gacaaaaccg tcaccaccat tattgccagg acctgccacg accatgacgc
     7021 gttggcgctg cattttggcc gttgcatcgg cgaccgtacg cccggcacgt tccatgaggt
     7081 cgatgcccgg aatgccgccg gccatggcaa ggcggtctgc ttccgccatc tcgtcggtcg
     7141 taagcaattc aatcatcgcg aacctactgg ccggctgcca caattcgcac aaatcattta
     7201 cgcaacacca aggcctcaac gctggctaaa atgtagtcac tttgcttaac ttgtaggcgc
     7261 cgaagtttag gcagtctgct agcccaaccg tgcctccata ccaagccgct gatcctgttg
     7321 gatttcttgg gtgcgtagtg cttggcacgg gacctgcaaa ccggtagcgg ttctccgacc
     7381 cattctggtg aacttggggg taaggaaagg cgatgaaaaa aatcgaggcc atcatcaaac
     7441 ccttcaaact cgacgaggtg aaggaagcgc tgcaggaggt cggcttacag gggataacag
     7501 tcaccgaagc aaagggcttt gggcgacaga agggacatac cgagctatac cgcggcgccg
     7561 aatacgtcgt cgattttctc cccaaggtga agatcgagat cgtgctcggc gatgacatgg
     7621 tggaaaaagc gatcgatgca atccggcgtg ctgcccagac tggccggatt ggcgacggga
     7681 agatattcgt ttccagcatc gaagaagcca ttcggatcag gaccggggaa tccggaattg
     7741 atgcaatcta acccgcaggc aaaagtcctc gcgggaaatt tcatgaaaac aagggggaat
     7801 gcaaaccgat gacgacagcc aaagatgtaa tgaagctgat caaagaccat gacgtcaaat
     7861 atgccgattt ccggttcacc gatccgcgcg gcaagtggca gcatgtcacc ttcgatgtca
     7921 gcattattga agaagagacc ttcgccgaag gccagatgtt cgacggctcc tcgatcgccg
     7981 gctggaaggc gatccacgag tccgacatga acttgatgcc cgacccggct tcggcctgta
     8041 ttgatccatt cttcgccgaa accacggtat cgctggtttg cgacgtgctc gagccgacaa
     8101 ccggcgagcc ctacaaccgc gacccgcgca gcatcgcgaa gaaagccgag ggaatggtga
     8161 aggcgcaggg cgtcggcgat actatttatt tcggtccgga agccgaattc tttgtgttcg
     8221 acgacgtgaa atactcggcc acgccttaca acaccggctt caagctggac tcgatcgagt
     8281 ttccgaccaa ttcggatacc gaatacgaag gcggaaatct tggccaccac atcggcacga
     8341 agaaaggtta tttccccgtc cccccgcagg acactgccca ggacatgcgc agcgaaatgc
     8401 tggcagccat ggcgaaaatg ggcgtcaagg tcgagaagca tcatcacgaa gtgggctccg
     8461 cgcagcatga actcggcatg aaattctcgc cgctgacgca gatggccgac cagttaatga
     8521 tctacaagta ttgcatccag caggtggccc agatctacgg caagaccgcg acgtttatgc
     8581 cgaaaccgat ctacggcgat aacggctcgg gcatgcactg tcaccagtcg atctggaaag
     8641 gcggcaagcc ctctttcgcc ggaaacaagt atgcggatct ttcggagatg tgcctgtcct
     8701 acatcgcggg cattctcaag cacgcacgag caatcaacgc cttcaccaac ccgacgacaa
     8761 attcgtataa gaggctggtg ccgggcttcg aggcgccggt gctgctcgcc tattcgcagc
     8821 gcaaccgctc ggcttcctgc cgtattccat acacggccaa tccgaaggcc aagcgcgttg
     8881 aggtccgctt ccccgatccg ctggccaatc cgtatctcgc gttcgcggca atgacgatgg
     8941 ccggcctgga cggcatcaag aacaagctcg atccgggcaa cgcggtcgac aaagaccttt
     9001 atgatctgcc gccggccgag ctcaaggaga tccccacggt ctgcggcagt ctgcgcgagg
     9061 cgctcggtta cctcgacaag gaccgggcgt tcttgaaggc cggtggcgtg ttcgacgatg
     9121 acttcatcga ttcatatatc gacctgaaaa tgaccgaagt gatcaggttc gagcacacgc
     9181 cgcatccggt tgaatttgaa atgtactatt cggcgtaagc gttcctccca aacatcgcgc
     9241 gagcggtgca actttcgggc gctccgcaag gggcgccctt tttcttttga acccaatcag
     9301 ccgatcagcc gatcaaaaag gccaggagga caagtccggc tgcgatcacg gtagcagacg
     9361 caatcatttg gcgtcggtgc cgcttggggc catagacgcc ggcagcacgc cgagcggcaa
     9421 tcagcgccgc gtcgaattca gccgagttgg aataggcgca tgccagagcg gcgcctgctc
     9481 gcgcggcatc gaattcaagt gaaggcgtct cggtatggct ttccgtaccc cgcatgcccg
     9541 tatcgtaccg cgaacagggt aaatgagacg ttgcacgggg gttgggtggc ggtctgaaat
     9601 agccgtcaga aggcctcttt gcgccgcgac catcgggcaa aaagcccagc gcctaccggc
     9661 tttgcccggc gggccgcggc aatgagacga gctcgttcgt tcgccatttc ttcttcggcc
     9721 acgtggaaac ggtttctgcc ggcgtatttc gcccggtaga gcgccgcatc cgcacggccg
     9781 atca
//
LOCUS       DATDHO010000604         3872 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_425717, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000604 DATDHO010000000
VERSION     DATDHO010000604.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3872
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425717"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..571)
                     /locus_tag="VIY07_11575"
     CDS             complement(<1..571)
                     /locus_tag="VIY07_11575"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY6382427.1"
                     /translation="MRDRTTAIIVGGGIGGLFAANALIARGVPVSVYEQASALGEIGA
                     GVFLTPNSVRHLERIGLGAAIEKWGARVGTGSRYFRHDGTPIAPVQVTDSSGWNATFG
                     MHRADLVAILADVLPAEVIRTEHRCTGFEQDDSSARVSFANGRTASADIIIAADGIHS
                     ELRPFVFPPSHPVFSGSVAYRGVLPLECIP"
     gene            700..1704
                     /locus_tag="VIY07_11580"
     CDS             700..1704
                     /locus_tag="VIY07_11580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6382428.1"
                     /translation="MREWPSHLPLLASRCAMVSAIFLAVSAPLQSETRAEEYPDRTVK
                     IVVPFPAGGTADAVPRIVGDWLSRKWGQTVIIENRTGAAGNIGAESVYRSPPDGYTLL
                     CAPPPPLVINQNLYPKLGFDPAKFEPIIVTIQVPNVLIVNPNNIKASTLAELIEYLRS
                     NPGKVTSATQGNGTTSHLTSELFQLMAKVTLRHIPYRGSAPALQGLLAGDVDLMFDNL
                     GVSLPLVEAGKLKLLAVASANRLPTLPDVPTIGEMLPGFEAVAWYGIVAPPNTPEKII
                     RKINADVNEALRQPEVQDQLKKLSGEIVGGTVERTSRYLREEVDRWGNVIKAADIKLQ
                     "
     gene            complement(1708..2682)
                     /locus_tag="VIY07_11585"
     CDS             complement(1708..2682)
                     /locus_tag="VIY07_11585"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6382429.1"
                     /translation="MLNAAIVGLGWWGKTLVKAARDFGAPLRFVRGVTLEPETARDFA
                     AEQQLALGTSLDEVLADKSIQAVVLATPHTAHRAQVEAIAGAGKHLYCEKPFTLSKAD
                     ATAALEACRRAGIVVAVGHHFRLMPSMRVLAELKDAGAFGTIMHAEGNYSHDWLANYP
                     ADSWRLRAEESRAGGMTGMGVHVLDCFRDLVGPMKRISAVSKARALKLATGDTTSALI
                     EFENDATGTLATTMKTPFAWRVTIFGENCWAESVSETRAIVRRAGKEPQIIDRPADNY
                     LGRNLDYFARAALGQGKFPILPDGILQTAAALEAVFKSADANGAWMTV"
     gene            complement(2693..3346)
                     /gene="maiA"
                     /locus_tag="VIY07_11590"
     CDS             complement(2693..3346)
                     /gene="maiA"
                     /locus_tag="VIY07_11590"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HEY6382430.1"
                     /translation="MKLFSFWRSLATYRVRIALNLKKFAPDEVIEVNLMKGHQREGEF
                     RKINPMMAIPALILDDGTVLFESLAILEYLDETHPNPPLLPKDPKARARVRGLAQIIA
                     CDTHPLIVPRVREYLAHEYKIDEAGVLKWGHHWHTAALTALETHLSGSKETGRYCQGD
                     TITIADICLAGQAVGAAYFKCDLAPYPTVKGIVDDLNKIDAFARAHPLKQPGAPATV"
     gene            complement(3372..>3872)
                     /locus_tag="VIY07_11595"
     CDS             complement(3372..>3872)
                     /locus_tag="VIY07_11595"
                     /inference="COORDINATES: protein motif:HMM:NF026183.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-binding protein"
                     /protein_id="HEY6382431.1"
                     /translation="QGKLLGLMGAEPADAERAKPILNPLCRRLEHCGPIGAGASMKLA
                     INLPLMVAWQAYGEAFAIAGAAGWEPKRLLDLFVDTNGANPALKNRAEMIVTMFEGRD
                     PGPTTFSIANGVKDLRTMVETGEGRGADMRVTKAALSGFEDATKHGFGGGDGSQMSVY
                     WSSRKK"
BASE COUNT          778 a         1203 c         1139 g          752 t
ORIGIN      
        1 ctggaatgca ttcgagcggt agcacaccgc ggtatgcgac cgagcctgag aaaacggggt
       61 gagatggagg aaagacgaag ggccgaagct ccgagtgaat gccgtccgcg gcgatgatga
      121 tgtcagctga ggcggtcctg ccgttcgcga acgatacccg agcactgctg tcgtcctgtt
      181 caaaaccggt gcagcgatgt tcggtacgga tgacctcggc cggcaggaca tcggcaagga
      241 tcgcgaccag atcggcccga tgcattccga atgtggcgtt ccagccggac gaatccgtga
      301 cctggaccgg ggcgatcggc gtgccatcgt gacggaagta ccgagagccg gtccctaccc
      361 tggcgcccca tttttcgatg gccgctccca gcccgatcct ttccaggtgg cgcacgctgt
      421 tgggggtgag aaacactccg gccccgattt cgccgagggc cgaggcctgt tcatacaccg
      481 acaccggcac gccgcgcgca atcagcgcgt tggcagcgaa cagcccgcca atgcctcctc
      541 caacaataat ggcggtggtg cggtcgcgca tgatcacttc ccggcaaaga ccgcggcaaa
      601 atacacctgt cgcattgttg tatcttcaca cagactgaag cagtctcgcc atcggaaatg
      661 accggcctgg tgacggcctg aaatttcgga gtttattgaa tgcgcgaatg gccttcacat
      721 cttcctctac tcgccagtcg ctgcgccatg gtgtcggcga tatttcttgc ggtgtcggca
      781 ccgttgcaaa gtgaaacgcg cgcggaagag tacccggatc gcacggtcaa gatcgtcgtg
      841 ccattcccgg caggaggaac agctgacgcc gtcccaagga ttgtcggcga ctggctgtcg
      901 cgcaagtggg gccagacagt gatcatcgaa aatcgtaccg gcgcagccgg aaatatcggc
      961 gccgagtcgg tttatcgctc accgcctgac ggatacacgc tgctgtgcgc tccgcctccg
     1021 ccgctcgtca tcaaccaaaa tctttatccg aagctcggct tcgacccggc caaattcgag
     1081 ccgattatcg taacgattca ggtgccgaac gtgctaattg tgaatccgaa caatatcaag
     1141 gcatcgacgc tggcggagct gatcgaatac cttcgcagca accccggcaa ggtgacgagc
     1201 gcgacgcaag gcaacggcac cacgtcgcat ctcacctccg aattgttcca gttgatggca
     1261 aaggtgacgc tgcgtcacat tccctatcga ggctcggccc ccgcgctcca gggtctactc
     1321 gccggcgacg tcgacttgat gttcgataac ctgggcgtgt cgctgccgct cgtcgaggct
     1381 ggcaagctca aattgcttgc cgttgcgtct gccaatcgcc tgccgaccct gccggatgtg
     1441 ccgacgatcg gcgaaatgct gcctggcttc gaagcagtcg cctggtacgg catcgtggct
     1501 ccgcccaata ccccggaaaa gataatcagg aagatcaacg ccgacgtaaa tgaggccctc
     1561 cgccaacccg aagttcagga ccaattgaag aaactgtcag gggagattgt tggcggcaca
     1621 gtcgaacgca cgtccaggta cctgcgcgag gaagtcgacc gctggggaaa cgtcatcaag
     1681 gccgcagata tcaagctgca gtgagaatca gacggtcatc caggcgccat tcgcgtccgc
     1741 cgacttgaaa accgcttcga gcgcagctgc tgtctgcaag atgccgtcgg gtagaatcgg
     1801 aaacttcccc tgccccaacg ctgcccgtgc gaaataatcg agattgcgcc cgagataatt
     1861 gtccgcaggc cggtcgatga tttgcggttc ttttcctgcg cgccttacga tcgcgcgcgt
     1921 ttcgctgacg ctttccgccc agcagttttc gccaaaaatc gtgacgcgcc aggcaaacgg
     1981 cgtcttcatg gtcgtggcaa gcgtgccggt tgcgtcattc tcgaattcga taagggctga
     2041 ggtggtgtcg ccggtggcga gcttgagagc gcgcgctttc gaaacggcgc tgatccgctt
     2101 catcggtcct acaagatcgc gaaagcaatc gagcacatgg acgcccatgc cggtcattcc
     2161 gccggcccgg ctttcctccg cgcggagccg ccagctgtcg gccggataat tggccagcca
     2221 gtcgtgactg taatttcctt ccgcgtgcat aatggtgccg aaggcaccgg cgtccttgag
     2281 ctccgccagc acccgcatcg acggcatcag ccgaaaatga tggccaactg cgacaacgat
     2341 gccggcgcgc cggcaggcct cgagcgccgc cgtcgcatca gctttgctta gcgtgaacgg
     2401 cttttcgcag tagaggtgct tgccggcccc ggctatcgct tccacctgcg cgcggtgagc
     2461 ggtgtgcggg gtcgccagca caacggcttg aatcgacttg tcggcgagaa cctcatcgag
     2521 cgaggtgcca agcgcaagct gctgctcagc ggcaaaatcg cgtgccgttt cgggctcaag
     2581 cgtaacgccg cgcacgaagc gcagaggcgc gccaaaatcg cgcgccgcct tcaccagggt
     2641 tttgccccac cacccgaggc cgacgattgc agcattcagc atacaaacgc gactacaccg
     2701 tggccggggc gcccggctgc ttcagcggat gcgcgcgagc gaaggcatcg atcttgttca
     2761 gatcgtcgac gatgcccttc acggttggat agggcgcgag gtcgcatttg aaataggctg
     2821 cgcccaccgc ctggccggca aggcaaatgt ccgcgatcgt gatcgtatcg ccctgacaat
     2881 agcggccggt ctccttcgaa cccgaaagat gcgtttccaa agccgtcagc gcggccgtat
     2941 gccagtggtg accccacttc aggacgccgg cttcgtcgat cttgtattca tgcgcaagat
     3001 attcgcgcac acgcggaacg atcaacgggt gcgtgtcgca ggcaatgatc tgcgcgagcc
     3061 cgcgcacgcg cgcccgtgcc ttcgggtctt tcggcaaaag cggtggattg ggatgcgtct
     3121 catcaagata ttcgaggatc gcgagggatt cgaacagcac cgtgccgtcg tccaggatga
     3181 gggcggggat tgccatcatc ggattgatct tgcggaattc cccctcgcgt tggtgtccct
     3241 tcatcaaatt gacttcgatc acttcgtccg gcgcaaattt cttcagattg agcgcaatgc
     3301 gaacacgata ggtcgccaac gaacgccaga atgagaacag cttcacggtg tttctccctt
     3361 tgtactgact actacttttt ccgactcgac cagtacaccg acatctgcga gccgtcgccg
     3421 ccgccaaagc cgtgctttgt agcgtcctcg aaaccggaaa gcgcagcctt ggtcacgcgc
     3481 atatcggcac cccgtccttc acccgtttcg accatcgttc gcaaatcctt tacgccgttg
     3541 gcaatgctga acgtggtcgg cccgggatcg cgcccttcga acatggtcac aatcatttcg
     3601 gcgcgatttt tcagagcggg gttagctcca ttggtatcga caaagaggtc aagcagccgc
     3661 ttcggctccc agccggcggc gcctgcgatg gcgaaggcct cgccgtaagc ctgccaggcc
     3721 accatcagtg gcaggttgat tgcaagcttc atggaagcgc cggcgccgat cggaccgcaa
     3781 tgttcgagcc gcctgcacaa cgggttcaga ataggctttg cccgttcggc atccgcaggc
     3841 tccgcaccca tcaggccgag cagttttccc tg
//
LOCUS       DATDHO010000605         2591 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_128775, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000605 DATDHO010000000
VERSION     DATDHO010000605.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_128775"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1206
                     /locus_tag="VIY07_11600"
     CDS             <1..1206
                     /locus_tag="VIY07_11600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase regulatory-like
                     domain-containing protein"
                     /protein_id="HEY6382432.1"
                     /translation="ANAPEALGPGHAASDKLMQPSPYWGAEKIWDTKANNHNGMVDKK
                     GRVWFAARFRGADNPAFCKKGSDHPSAKVFPLERTNRSLTILDPKTQQYTYVDTCFQT
                     HHLQFGYDANDTLWTSAGGATAPVVGWINTKMFDETGDVAKSQGWTPLVLDTNGNGKR
                     DEYVESDQPVDPTKDKRIIAGFYAVMPSPVDGSIWGSVRRYPGSIVRLVPGANPSETA
                     LAEIYNVPKPGFGIRGADIDKQGVVWVSLGSGHMGSFDRRKCKGPLNGPKATGDHCPE
                     GWSFHQYPGPGFKGVGENSAESSYYSWVDQHNTFGLGEDVPMSTANLHGGLVAFKDGK
                     MVLLTVPYPLGFYAKGFDGRIDDSKAGWKGRGLWSSSGDRASWLMERGKGSKPLVVHF
                     QLRPDPLAK"
     gene            1476..>2591
                     /locus_tag="VIY07_11605"
     CDS             1476..>2591
                     /locus_tag="VIY07_11605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase-like regulatory
                     domain-containing protein"
                     /protein_id="HEY6382433.1"
                     /translation="MKRTKALYLCIIAVGIASILVSPSSQLTSQQNAAVRIDNDDIGG
                     VVTSAKGPEAGVWVIAETTDLPTKFAKIVVTDDQGRYVLPDLPKANYSIWVRGYGLID
                     SSKVKAVPGKILNLKAVVAPNEATAAEYYPAIYWYSMLKIPDKAEFPSGKVKSQNEWL
                     NVVKTNGCVTCHQMGNKATRTIPKELGDFKSSADAWARRIVSGQAMTTMMTRINELGA
                     EKANGLFGDWTDRIAAGELPKSKPQRPQGVERNVVVTLWDWSNSKAYLHDEISTDKRN
                     PTLNPNGLIFGATELSTDLLPVLDPVRHTAWEIKHPVRDPKTPSAKTDPLTPSPYWGA
                     EPIWDSQSNQHNPMYDEKSRVWFTARVRPPDNPAFCKK"
BASE COUNT          592 a          728 c          772 g          499 t
ORIGIN      
        1 gcaaacgcgc cggaggcgct cggaccgggc catgcggcaa gtgacaagct catgcaaccg
       61 tcgccttact ggggcgcgga aaagatctgg gataccaaag caaataacca caacggcatg
      121 gtcgataaga aaggacgagt ctggttcgcc gcgaggtttc gtggagccga caatccggcc
      181 ttttgcaaaa aaggctccga tcatccctcg gctaaggtct ttccgttaga gcggacaaac
      241 cgctctctca cgatactcga tcccaagaca cagcaataca catacgtcga tacctgcttt
      301 cagacgcatc atttgcagtt cggctacgat gccaacgata cgctctggac cagcgcgggc
      361 ggcgccaccg cgccggtggt aggctggatc aacacgaaga tgttcgacga gacgggcgat
      421 gtggcaaaat cgcagggctg gactcccctg gtcctcgata ctaacggcaa cggcaagcgc
      481 gacgagtatg tcgagtccga ccagccggtg gatccaacca aggacaagcg gatcatcgcg
      541 ggcttttacg ccgtgatgcc gagcccggtg gacggctcga tctggggctc ggtgcgacgg
      601 tatccgggat caatcgtgcg gctcgttccg ggagccaatc catcggagac agcgctcgcc
      661 gagatttaca acgtgccgaa gccgggcttt gggattcgcg gcgctgacat cgataaacaa
      721 ggcgttgtct gggtatcgct cggaagcggt cacatgggaa gttttgatcg gcgcaagtgc
      781 aagggcccgc tcaacgggcc gaaggccacc ggcgatcatt gcccggaggg ctggtcgttt
      841 catcagtacc ccggtcccgg cttcaagggt gtcggcgaga acagtgcgga gtcgagctat
      901 tattcctggg tcgaccagca caatacgttc ggtctcggcg aggacgtgcc aatgtccacg
      961 gccaacttgc acggcggcct ggtcgcgttt aaggacggca agatggtcct gttgaccgtg
     1021 ccctatccgc tgggctttta cgccaagggt ttcgacgggc gcatcgacga ttcgaaagcg
     1081 ggctggaaag gccgcggctt atggagttcg agcggcgacc gcgcgtcgtg gttgatggag
     1141 cgcggcaagg gttccaaacc gctcgtcgtg cacttccagc ttcgcccaga cccgctggcg
     1201 aaatgacgga gaacaaaagt tagctttgga ttcttatgaa cgttggcggg gccactgtct
     1261 cggttccgcc aacgtttaca attcgctttt ttgaacgaaa cgttggcgag cggctgccag
     1321 tgaacgccgt ttgccgctcc cgcacttggt caaaggcaag ttgacacaac acttcagttt
     1381 ccggtacgtt tcccccagat caatttccct gacaatccta gcgtagcggg cgataagttt
     1441 tgtttcactt cacgtgagcg cgaagggagc tcgacatgaa acgaacgaaa gcgttgtact
     1501 tgtgcataat agcagtcggc atcgcctcga ttttggtttc accgtcgagc caactgacta
     1561 gccaacaaaa cgcagcggtc cgtatcgaca acgacgacat cggcggcgtg gttacgagcg
     1621 cgaagggacc ggaggctggt gtctgggtga ttgcggagac caccgacctg cccacgaagt
     1681 tcgccaagat cgtcgtcacc gacgaccagg ggcgttacgt gctgcctgat ctgccgaaag
     1741 ccaactacag catttgggtg cgtggctacg ggctcatcga ttcgtcgaag gttaaagctg
     1801 tgcccggcaa gattctcaat ttgaaagcag tggtagcacc gaatgaagcc acggcggcgg
     1861 aatattatcc ggccatctac tggtactcca tgctcaagat tccggacaag gccgaatttc
     1921 cctcgggaaa ggtcaaaagt cagaacgagt ggttgaacgt ggtgaaaacc aatggctgtg
     1981 taacgtgcca tcaaatgggc aacaaggcga cccgcacgat tccgaaggag ttgggcgatt
     2041 tcaagtcctc ggccgacgca tgggctcggc gcatcgtgtc cggacaagct atgaccacca
     2101 tgatgacccg catcaacgag cttggcgcag agaaagccaa cgggttgttt ggcgattgga
     2161 ccgatcggat cgccgccggc gagttgccta aatccaagcc gcaaagaccg cagggcgtcg
     2221 agcgtaacgt cgtcgtaacg ctctgggact ggagcaactc aaaggcatac ctccacgacg
     2281 agatatccac cgacaagcgc aaccctactc tcaacccgaa cggtttgatc tttggcgcaa
     2341 ccgagttgag cacggatctg ttgccggtat tggatccggt gcgccatacg gcgtgggaaa
     2401 taaagcatcc ggtacgcgat ccgaaaactc cctctgcgaa gacggaccca ctaacaccgt
     2461 cgccctattg gggcgcggaa ccgatctggg atagccagtc caaccagcac aacccgatgt
     2521 acgatgaaaa gtcgcgcgtt tggtttaccg ctcgagtgcg gccgccggat aatccagcct
     2581 tctgcaagaa a
//
LOCUS       DATDHO010000606         2287 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_425770, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000606 DATDHO010000000
VERSION     DATDHO010000606.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425770"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            218..760
                     /locus_tag="VIY07_11610"
     CDS             218..760
                     /locus_tag="VIY07_11610"
                     /inference="COORDINATES: protein motif:HMM:NF025653.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAN domain-containing protein"
                     /protein_id="HEY6382434.1"
                     /translation="MRIPIRLWAALVLAASTCVSQAQAQSGFDRRGGDYQNFQIRNGD
                     PAICAARCERDARCQAWTFSYPRTASAAATCWLKSQVPARIEDKCCVSGVRGAGVIQP
                     RKGPIEYSIDRLGGDYRNIEVANDASGGTCKAACEADNKCRAWTYVRPGYIGAAPRCY
                     LKERITRPRSKPCCISGVVR"
     gene            complement(768..2225)
                     /gene="tldD"
                     /locus_tag="VIY07_11615"
     CDS             complement(768..2225)
                     /gene="tldD"
                     /locus_tag="VIY07_11615"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018460009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HEY6382435.1"
                     /translation="MQKPYLVVLEGVMDPSISSLIDRTGLDRGKVRQLIGRGLEGADD
                     GELFLEYRQAEALTFDNGRLKQATYDTVQGFGLRAVKGEAVGYAHASDLSEAALGRAA
                     EAVRAVNGGHSGTYAEPPGRTNRKLYSDENPLGSPAFESKVKLLESMDAYAREKDPRV
                     RQVTASMGASWQVVEILRADGETYRDIRPMVRLNVSVVAGEGERQESGSYGFGGREGF
                     QRLIEPQAWRGAVDEAIRQALVNLQAIPAPAGEMDVVLGSGWPGVMLHEAVGHGLEGD
                     FNRKKTSAFAGLMGQLVAAKGVTVVDDGTIQARRGSLSIDDEGTPTNRTVLIEDGVLV
                     GYMQDRQNARLMRMAPTGNGRRESHAHVPMPRMTNTYMLAGTHDRQEIIASVKNGLYA
                     VSFGGGQVDITSGKYVFQCTEAYRIENGKVGAPVKGAMLIGNGPTDLHRISMIGNDFA
                     LDPGIGTCGKNGQGVPVGVGQPTLRMDKITVGGTA"
BASE COUNT          414 a          739 c          666 g          468 t
ORIGIN      
        1 cggccgctcg atccgacacc cgcgaacatc ccctctcgcg gccggatctc gcgcccgctg
       61 gcccctccgg cgggcgctta cttttggaaa acatcttcca caagagccat caacactgat
      121 tacacatttg cggagccgtc attgtatccg cctgcacaat ggccgataac ataccgtcgg
      181 ggcaaagcta ccggttctcg aattcgagcg ggcgcgcatg cgaattccga tcaggctgtg
      241 ggccgctctt gtactggcgg cgtcgacttg cgttagccag gcacaggctc agagcgggtt
      301 cgatcgccgg ggcggcgatt accagaactt ccagatccgc aacggcgatc cggcgatatg
      361 cgcggcccgg tgcgagcgcg atgcccgctg ccaagcgtgg accttttcat acccgcgcac
      421 agccagcgct gctgcgactt gctggctgaa gagccaggtg ccagcccgca ttgaggacaa
      481 atgttgcgtt tccggggtgc gcggggcggg cgttatccaa ccccgcaaag gccccattga
      541 atattcgatt gatcgccttg gcggagatta tcgcaatatt gaggttgcca acgatgcatc
      601 cggcggaacc tgcaaggccg catgcgaggc cgacaataag tgccgcgcct ggacctacgt
      661 gaggccgggc tacatcggcg cagctccccg ttgctacctt aaggaaagaa tcacgcgccc
      721 gcgctccaag ccttgctgca tttcaggcgt cgtgcgctag ctggctacta tgcggtgccg
      781 cccaccgtga tcttgtccat acgcagggtc ggttgaccga cgccaacagg cacgccttgg
      841 ccgttcttgc cacaggttcc gatgccgggg tcgagcgcga aatcattacc gatcatgcta
      901 attcgatgca gatcggtggg accgtttccg atcagcatgg cgcccttgac gggggcaccg
      961 accttgccgt tttcgatcct gtaagcctcg gtgcattgaa agacgtattt gcccgaggtg
     1021 atgtcgacct ggccgccgcc gaaactgacg gcataaaggc cgttttttac cgaagcgatg
     1081 atttcttgcc ggtcgtgcgt gccggcgagc atgtatgtgt tggtcatccg cggcattggc
     1141 acgtgcgcat gcgattcccg gcggccgttt ccggttggcg ccattcgcat caaacgtgcg
     1201 ttctgtcgat cctgcatgta gcccacgagg accccatcct cgatcaatac cgtacgattg
     1261 gttggcgtgc cttcgtcgtc gatcgagagt gagccgcgcc gcgcctgaat cgtgccgtcg
     1321 tcaacaacgg tcactccctt ggctgcaacc agctggccca taaggccggc aaaggcggaa
     1381 gtcttcttgc gattgaaatc gccttcgagc ccgtgtccga ccgcttcgtg cagcatcacg
     1441 cctggccagc ccgagccgag cacaacatcc atctcccctg ccggcgccgg aatggcctga
     1501 agattgacca gcgcctggcg gatcgcttca tcgactgcgc cccgccacgc ctgtggctcg
     1561 ataagccgct gaaagccttc gcgtccgccg aagccatagc tgccggactc ctgtcgctcg
     1621 ccttcgcccg caaccaccga tacattcaat cgcaccatcg ggcgtatgtc gcgataggtc
     1681 tccccatcgg cgcggaggat ttccacgacc tgccagctcg cacccatgct ggcagtgacc
     1741 tgccgcacgc gtggatcctt ttcacgcgcg taggcatcca tcgactccag taattttact
     1801 ttggattcga atgcgggcga gccgagcgga ttctcgtcgc tgtagagttt gcggttggtc
     1861 cgtcccgggg gctcggcata ggtgccgctg tgcccgccgt taaccgcgcg cacggcttcg
     1921 gcggcgcggc ccagcgcggc ttcggaaaga tccgaggcat gggcataacc gaccgcctcg
     1981 cctttgaccg cgcgcagccc aaaaccctgc acggtatcgt acgttgcctg cttgagccga
     2041 ccgttgtcga aagtcagcgc ttctgcctgc cggtattcca ggaacaattc gccatcatcg
     2101 gccccttcca gcccgcgtcc gatgagttgg cggacttttc cgcgatcgag gccggtgcgg
     2161 tcgatgagcg aggaaatgct tggatccatg actccctcca gcaccaccag atagggtttc
     2221 tgcatcgatt tggcgagtcg cagccggctc catatgcttc caaggcatta aaatgatgac
     2281 aaatatg
//
LOCUS       DATDHO010000607         5658 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_28866, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000607 DATDHO010000000
VERSION     DATDHO010000607.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5658
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28866"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1151)
                     /locus_tag="VIY07_11620"
     CDS             complement(<1..1151)
                     /locus_tag="VIY07_11620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6382436.1"
                     /translation="MDARTSRYHDVYAQWQRNPEAFWTEAAADIDWYEKSKKIFDPSA
                     GIYGRWFAGATCNTCYNALDRHVLAGRNDQAALIYDSPVTNTLKTFTYGRMLSEVQLL
                     GAMLRDFGVQKGDRVIIYMPMVPEAVFAMLACARIGAIHSVVFGGFAAKELATRIDDA
                     KPKVILSASCGIEGPSRVIPYKPLLDEAITIATHKSQACMILQRPQCEASLVTGRDHD
                     WRTVWEHAVNYAKTSECVPVAATDPLYILYTSGTTGIPKGVVRDNGGHMVALRWSMQN
                     LYGISPGEVWWSGSDIGWVVGHSYIVYAPLLHGCTSILYEGKPIGTPDAGAFWRVISQ
                     HGVVSLFTAPTAFRAIKKEDPKGELIRKYDLSKFRTLFLAGERADPPTI"
     gene            complement(1264..1434)
                     /locus_tag="VIY07_11625"
     CDS             complement(1264..1434)
                     /locus_tag="VIY07_11625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382437.1"
                     /translation="MSIFDHYGFRNRMKKAKTRPAARELAEPPAPGKPAWWEASFKPD
                     DYKCRDRLLFAG"
     gene            complement(1505..3010)
                     /locus_tag="VIY07_11630"
     CDS             complement(1505..3010)
                     /locus_tag="VIY07_11630"
                     /inference="COORDINATES: protein motif:HMM:NF024491.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HEY6382438.1"
                     /translation="MPVDFIASNTTDGLTLKLYRGEDMVLLAFDVDDSLKKSDFVGFG
                     IQYFVGNATRPRDVFNFLTFKRVRLAAKAAKKEIALAERRSMRSPIQMFRWAHVPSVP
                     LDGPVTYQVSAMFWNGDKAPLAKATTRATIGANRATRGPFLNLGFTRGFASSQAYERN
                     FPNQRKIMPPVGKPQLDFDTAPFEGDGKPYPWLGFEARRILFGFLDECAADPSVLLDV
                     FADDLSNPEIVRRLETFGPRLRIVIDDSDKHGKPASDESNAAKRLAVSAGVSNVARHH
                     FSGLQHNKVIIARRKSGNASEPFAVATGSTNFSLGGLYIQNNNVLLFRDADVARLYAD
                     VFDAAFPKAAGFSGKPIAKQWFEKTLPDAGTYRFCFSPHKKAALSMDPVAEAIEGAKK
                     SVFYAIAFRGAQSGPADKALDALDPKKMLVMGVANMAGKPKSQTLLVQLPGRGPIPFG
                     PAALTKNLPEPFKAEWTGGGGIHMHHKFVICDFNGDNPRRFHRVFQSCGRG"
     gene            3128..4756
                     /locus_tag="VIY07_11635"
     CDS             3128..4756
                     /locus_tag="VIY07_11635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEY6382439.1"
                     /translation="MAKLPYDIDLDRNPANYQPLTPLGFLERAAAVFPDNTAIIHGSM
                     RRTYADFYGRARQLASALAKRGIKRGDTVSVLLANTPAMLECHYGVPMCQAALNTLNT
                     RLDAPIIAFSLDHADAKVVITDREYSKVMKQALSLCKVKPIVIDCDDPEYQGAGERIG
                     QIEYEDFVAEGDPAYAWKMPDDEWDAISLNYTSGTTGDPKGVVYHHRGAYLLAVGNVV
                     TCSMAKHPVYLWTLPMFHCNGWCFPWSISVVAGTHVCLRAVRAPTMYDAIATHKVTHL
                     CGAPIVMATLLNAPANEKKPLPHVVEFFTAAAPPPEAVLAAMKEAGFNVTHLYGLTES
                     YGPAVVNDWHNEWSALGPVEQAERKARQGVRYGALESLDVLDPDSMIPVVRDGETLGE
                     VMMRGNVIMKGYLKNKASTEKAFAGGWFHTGDLGVMHADGYIQLKDRSKDIIISGGEN
                     ISSIEVEDALYKHPAVAAAAVVAKPDDKWGETPCAFVELKPDAKASTDELIQWCRQHL
                     ASYKCPRYLVFAEIPKTSTGKIQKFKLREMAKAI"
     gene            complement(5014..5202)
                     /locus_tag="VIY07_11640"
     CDS             complement(5014..5202)
                     /locus_tag="VIY07_11640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382440.1"
                     /translation="MARSYYSTIFEQSADEIWNVIRDFNNYPVWVDGAGESEIEAGKP
                     GDAVGAVRNVLYQGKRIR"
     gene            5300..>5658
                     /locus_tag="VIY07_11645"
     CDS             5300..>5658
                     /locus_tag="VIY07_11645"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY6382441.1"
                     /translation="MPDVFISNDGPVRKIRMNRPEKKNALTLAMYESMANAIEDAGKS
                     DGVRCLIIAGTQDVFCAGNDLNDFIVMARSGSLGEPIVRFLHTLARCEKPIVAAVSGA
                     AVGVGTTMLLHCDQVIA"
BASE COUNT         1163 a         1691 c         1680 g         1124 t
ORIGIN      
        1 tggatggtcg gcggatcggc gcgctcgccg gcgaggaaca acgtgcggaa tttggagaga
       61 tcgtatttcc tgattagctc gcctttggga tcttccttct tgatcgcgcg gaacgcggtg
      121 ggcgccgtga acagcgacac cacgccatgt tgggaaatca cccgccagaa cgcgccggcg
      181 tcaggcgtgc cgatcggctt gccttcataa aggatcgagg tgcaaccatg aagcaatggc
      241 gcatagacaa tataggagtg accaaccacc cagccgatgt cggagcccga ccaccacact
      301 tctccgggtg aaatgccata aagattctgc atcgaccatc tgagggcgac catgtgcccg
      361 ccattatcgc gcactacgcc cttcggaata ccggtcgtgc ccgatgtgta cagaatgtag
      421 agcggatcgg tggcggcgac cggcacgcat tcgctggtct tggcgtagtt gaccgcgtgt
      481 tcccacaccg tacgccagtc gtgatcgcgg cccgtaacga gcgacgcctc gcactgcgga
      541 cgctgcagga tcatgcaggc ctgcgacttg tgcgtagcga tagtgatcgc ctcgtcaagc
      601 agcggcttgt acggaatgac gcgggacggc ccttcgatgc cgcagctggc cgagaggatt
      661 accttgggct tggcatcgtc gatgcgggtt gcgagctctt tcgccgcaaa gccgccgaag
      721 accaccgaat ggatggcccc gatgcgtgcg caggcgagca tggcgaagac cgcctccggc
      781 accatcggca tatagatgat gacacggtca cctttttgga cgccgaagtc gcgcagcatc
      841 gcaccgagca actggacttc ggacagcatc cggccatagg tgaacgtctt gagcgtattg
      901 gtgacgggcg aatcgtaaat cagcgccgcc tggtcattgc gtcccgcgag cacgtgacgg
      961 tccagcgcgt tgtaacaggt gttgcaggtg gccccggcga accaccgccc gtaaatgccg
     1021 gcggaaggat cgaagatttt cttcgatttt tcgtaccagt cgatgtccgc agccgcttcc
     1081 gtccaaaatg cctcgggatt gcgctgccat tgcgcataca catcgtgata gcggctggtg
     1141 cgggcgtcca ttggcgttcc tcctgcgctc attgtgtcgc caccggggca agcaaacaag
     1201 cggcagcgca gcccgtgcaa gccatgaacg atttggcgcc gctacgccgc aggaggctgc
     1261 ggctcaacct gcgaacagca ggcgatcgcg gcatttgtaa tcgtccggct tgaaactggc
     1321 ctcccaccag gctggctttc ccggcgccgg cggttctgcc agttccctcg ccgccggcct
     1381 ggtctttgct tttttcatgc gattgcggaa cccgtaatgg tcgaaaatgc tcacggcctg
     1441 aacggcatat gcaatcacaa ccttcgcatc gcgaatctcg atgagattgt cgccattgcc
     1501 ctcttcaccc cctgccgcaa gattggaaga cccggtgaaa acgacggggg ttgtcgccgt
     1561 tgaaatcgca gatgacgaac ttgtggtgca tgtgaatgcc cccaccacct gtccattccg
     1621 ccttgaatgg ttccggcagg ttcttggtga gggctgccgg accaaacgga atcgggccgc
     1681 ggcccggaag ctgaaccaat agagtctgcg acttgggctt gccggccatg ttggccacgc
     1741 ccatcaccag catctttttc ggatcgagcg catccagagc cttgtcggcc ggcccgcttt
     1801 gcgcgccgcg gaaggcgatg gcgtaaaaca cggatttttt ggcgccttca atggcctccg
     1861 ccaccggatc catcgacaga gctgctttct tgtgcggcga gaaacagaag cgataggtcc
     1921 cggcgtccgg caacgtcttt tcgaaccatt gttttgcgat cggtttgccg gaaaatcctg
     1981 ccgccttagg gaacgcggcg tcgaacacgt cggcatagag tctcgcgaca tcggcatcgc
     2041 ggaacagcaa tacattgttg ttctgaatgt agagtcctcc gagcgagaaa ttggtcgagc
     2101 cggtggcgac cgcaaacggc tcagaagcat tgccgctctt gcgccgcgcg atgatgacct
     2161 tgttgtgctg aaggccggaa aaatgatgtc gcgcgacatt ggagacaccg gccgaaacgg
     2221 cgagacgctt ggccgcattg ctctcgtcgc tcgccggttt gccatgcttg tcggagtcgt
     2281 cgatcacgat gcgcagccgc ggtccaaagg tctcaagccg gcgcacgatt tccggattgg
     2341 acagatcatc ggcaaatacg tcgagaagga ccgacggatc cgccgcgcat tcgtccagaa
     2401 agccgaacag gatgcggcgc gcttcaaagc caagccaggg atacggcttt ccatcgccct
     2461 cgaagggagc agtatcgaaa tcaagctgcg gcttgccgac cggcggcatg atcttgcgct
     2521 ggttcggaaa gttgcgctca taggcctgcg agctggcgaa gcctcgcgtg aagccgagat
     2581 tgagaaatgg cccacgcgtg gcacgattgg cgccgatcgt cgcgcgcgtg gtggctttgg
     2641 caaggggcgc cttgtcgcca ttccagaaca tcgccgacac ctggtaggtc acagggccat
     2701 cgagcgggac gctgggaaca tgcgcccagc gaaacatctg gatgggcgag cgcatcgatc
     2761 tgcgctcggc cagcgcgatt tccttcttgg ccgcctttgc cgcaagcctc acgcgcttga
     2821 acgtgaggaa gttgaagacg tcacgcggcc gggtggcgtt gccgacgaaa tactgaatgc
     2881 caaagccgac aaagtccgat tttttcagcg agtcgtcgac atcaaacgcg agcaggacca
     2941 tgtcctcccc gcgatagagc ttcaacgtaa gaccgtcggt cgtattgctc gcgataaagt
     3001 ctacgggcat tgccttgcgc caatcccgtc ggatgttcag aactcgtggt gattcatggt
     3061 cgcctgggca gattgtctat cggcacatta cgctgttcaa tagtatcgtg acggtgggaa
     3121 taacccgatg gcaaaattgc cctacgatat cgacctcgac cgcaatccgg ccaactatca
     3181 gccattgacg ccgcttggtt tccttgagcg cgccgctgcc gtcttccctg acaataccgc
     3241 aatcatccac ggatcgatgc gccgcacata tgccgatttc tacgggcgtg cgcggcagct
     3301 tgcctcggcg ctggcaaagc gcggcatcaa gcgcggcgat acggtctcgg ttctgcttgc
     3361 caacacacca gcgatgcttg agtgccatta cggcgtgccg atgtgtcagg ccgcactcaa
     3421 cacgttgaac acgcgcctcg acgcgccgat catcgccttc tcgctggatc acgcggatgc
     3481 aaaggtggtg atcaccgacc gcgaatattc caaggtgatg aagcaggccc tcagcctctg
     3541 caaagtcaag ccgatagtga tcgactgcga tgacccggaa taccagggcg cgggcgagcg
     3601 gattggccaa attgaatacg aggactttgt cgcggaaggc gatcctgcct acgcctggaa
     3661 gatgccggac gacgaatggg acgcaatttc gctcaattac acgtccggca ccaccggaga
     3721 cccaaagggg gtcgtctatc atcaccgcgg cgcctatctg ctcgcggttg gaaatgtcgt
     3781 cacgtgctcc atggccaagc accccgtgta tctgtggacg ctgccgatgt tccactgcaa
     3841 cggctggtgc tttccgtggt cgatctcggt tgtcgcgggc acgcatgtgt gcctgcgagc
     3901 cgtgcgcgcg ccgacgatgt atgatgcaat cgccacgcac aaggtgacgc acttgtgcgg
     3961 ggcgcccatc gtgatggcca cgctgctcaa cgcgccagcg aacgaaaaaa agccgctgcc
     4021 gcatgtcgtt gagttcttca ccgcggcggc tccaccgccc gaggcagtgc tcgcagccat
     4081 gaaagaggcg ggctttaacg tcacgcacct ttacgggctg accgaatcct atggccctgc
     4141 cgtggtcaac gactggcaca acgaatggag cgcgctcggc cctgtcgagc aagcggagag
     4201 aaaggcgcgg caaggcgtgc gctatggtgc gctcgaatcg ctggacgtgc ttgacccaga
     4261 ctcaatgatc cctgttgtgc gcgatggcga gacgctcggc gaggtcatga tgcgcggcaa
     4321 tgtcatcatg aaaggctatc tgaaaaacaa agcctcaacc gaaaaagcct ttgccggcgg
     4381 ctggtttcat accggcgatc tcggcgtgat gcatgcggac ggctacatcc agctcaagga
     4441 ccgctccaag gacatcatca tctccggcgg agagaatatc tcgtcgatcg aggtcgaaga
     4501 cgccctgtac aagcaccctg ccgttgccgc cgccgccgta gtcgcgaaac cggatgacaa
     4561 gtggggcgag acgccctgtg cctttgtcga attgaagccc gatgcaaagg cgagcactga
     4621 cgagctgatc cagtggtgcc gccagcatct ggcttcgtac aaatgcccac gttacctggt
     4681 gttcgcggaa attccgaaga ccagcaccgg caagattcag aaattcaagc tgcgcgaaat
     4741 ggcgaaggcg atctagcggc cggcactttg ttcatcgagc ttccgtcgca acgagcccaa
     4801 ccatctcgca aacgactcac gaaagaaccc aacctgctcc tcgcggcgct caggctcgca
     4861 atcgaacgtt gcccaccact ccacgaatgt tcgggcgccg tcaacgacgg gcatgagtcg
     4921 cagggttgcc cggtaatttt gcaccggtat cgtccctgcg tcggcaaatt cgtaggtctg
     4981 cgaccgctcg acgtcggaca tcgcaagcag tttctagcga attctcttgc cctggtacag
     5041 aacgttgcgc acggcaccga ctgcatcgcc cggcttgcct gcctcgattt cactctctcc
     5101 cgcgccatcg acccagacgg gatagttgtt gaagtctcgg atgacgttcc agatctcgtc
     5161 agccgactgc tcgaagatcg tactataata gcttcgtgcc atgccgatgc tcccagtttg
     5221 cggatatgca tcagctggtg attgagcccg cctgaagcca cccgatttct gactcatttg
     5281 ttcgacactg aaacaatgga tgcctgacgt tttcatcagc aacgacggcc cggtgcgcaa
     5341 gatccggatg aaccggccgg agaagaaaaa cgcgctaacg cttgcaatgt atgaatctat
     5401 ggcgaacgcc attgaggatg cgggcaagtc ggacggcgtc agatgcctga tcatcgcggg
     5461 cactcaggat gtcttttgcg ccggcaacga tctcaacgac ttcatcgtta tggccagaag
     5521 cggctctctt ggtgaaccga tcgtccggtt tctgcatacg ttggcccgtt gcgaaaaacc
     5581 gatcgtcgcg gcggtgagcg gcgctgctgt gggggtcgga accaccatgc tgctccattg
     5641 cgatcaggtg attgcaag
//
LOCUS       DATDHO010000608         5540 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_75062, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000608 DATDHO010000000
VERSION     DATDHO010000608.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5540)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5540)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5540
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75062"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..919)
                     /locus_tag="VIY07_11650"
     CDS             complement(<1..919)
                     /locus_tag="VIY07_11650"
                     /inference="COORDINATES: protein motif:HMM:TIGR03123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEY6382442.1"
                     /translation="MAVVGWDIGGAHLKAARAENGRITAAIQVAAPLRLGLERLAEAF
                     AEANALIGQADCHAVTMTGELADTFSSRTVGVARLVAAAVRELAHSRVMIYAGRVGFV
                     APADADEHVTDIASANWFASASVVSGAIGSSLFMDMGSTTTDIVPIVDGAIAARGYTD
                     AERLAAGELVYTGLVRSFLMATADRAPFAGDWTELIHENFANMADVHRILGSLPDGAD
                     QMVTADGRAKTIAASQVRLARIVGRDIDDADPSAWNGLAQYFAEAQIRAITDGGMLVL
                     SRGQLPADAPVVAAGIGAGVLQEVARRLSR"
     gene            1003..1740
                     /locus_tag="VIY07_11655"
     CDS             1003..1740
                     /locus_tag="VIY07_11655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEY6382443.1"
                     /translation="MEIIPVIDLKGGIVVHAQMGRRELYRPIQTPLARTSNPVDVVAG
                     IISIYSVATFYIADLDAIGGSGSNHATIVKLKQAFPQVTLWLDNGIADIDLAEKWLQQ
                     DLGYLVLGSETQVDTTVVDRFSEDPRIVLSLDFREAEFQGPPTLLMHADRWPHRVIVM
                     TLDRVGSRSGPDIERLRVIKAAAKARAIYAAGGIRDAQDLRTLATAGIAGALVASSLH
                     DGRVTAADIQKLKKSVEKGAPCGSSLL"
     gene            complement(1762..2268)
                     /gene="fae"
                     /locus_tag="VIY07_11660"
     CDS             complement(1762..2268)
                     /gene="fae"
                     /locus_tag="VIY07_11660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016840 - carbon-nitrogen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0016051 - carbohydrate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formaldehyde-activating enzyme"
                     /protein_id="HEY6382444.1"
                     /translation="MAKISGLCVGESLVGDGNEVAHIDLIMGPRGSAAETAFANCLTN
                     NKDGFTTLLALVAPNLMCKPPTVLFNKVTIKSAKQAVQMFGPAQHAVGKAVADSVAEG
                     VIPQNEADNLFICVGVFIHWEAADDKKIQDYNYRATKEAIARAVAGEPKVAEVVSKRD
                     QVKHPFAA"
     gene            complement(2409..3290)
                     /locus_tag="VIY07_11665"
     CDS             complement(2409..3290)
                     /locus_tag="VIY07_11665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase"
                     /protein_id="HEY6382445.1"
                     /translation="MSELAPVGEWPNPIARAFEEACRDELDAPKPGNVHVFADGHRMT
                     VTDFERSAAAATGPLTATGQKIGARILGAVEASFAAVKSNTNLGIILLCVPLAAAAET
                     RPYDLQSSLSKVLQRLDREDADLTFRAIVLASPGGLGRAELHDVFEPATVTLREAMAE
                     AADRDRIARQYVTDFADVFDLGEPVFAAALGVSSDRRLATLTAYLGFLSAFPDSHIVR
                     KHGLSVADQVRREAAELAAQAGKANRLEDVLADVLAWDATLKQASVNPGTSADLTVAT
                     LFAHRLRSILPTAGNSD"
     gene            complement(3283..4221)
                     /locus_tag="VIY07_11670"
     CDS             complement(3283..4221)
                     /locus_tag="VIY07_11670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HEY6382446.1"
                     /translation="MPRSPELLAPRASPSGPTIALVTESTDWHARALCKAFVALGARA
                     RPLMLAACRFDTTSPMGLILPGLGTGLPDAVLVRDMAGGSFEAVTLRLGVLHALQEIG
                     IPVWNSARVIERCVDKSMTSFLLSRAGLPTPATWAAESLEAAAEIVRRETGPLVLKPL
                     FGSQGRGLRLIYSPQELPPPAEVSGVYYLQRYVGVERDGYHDFRVLVSQGRVVAAMMR
                     HSAHWVTNVKRGGKPVAAVADGVMRDLAIAAAAAVGANFAGVDIVYDRDERPTVLEVN
                     SMPAWSGLQRTTPVDIAGTLAGDLISGLALRAKGNV"
     gene            complement(4205..5176)
                     /gene="mch"
                     /locus_tag="VIY07_11675"
     CDS             complement(4205..5176)
                     /gene="mch"
                     /locus_tag="VIY07_11675"
                     /EC_number="3.5.4.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018759 - methenyltetrahydromethanopterin
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methenyltetrahydromethanopterin cyclohydrolase"
                     /protein_id="HEY6382447.1"
                     /translation="MNKAPAVSLNARAAALIKTLVAAKAELKIAVAQGERGETLIDAG
                     GRMQGSTAAGLAIAEICMGGLGKVQLSSSAMTPRWPWTLLVHSSNPVIACLAGQYAGW
                     RLAHGKGTDSFFALGSGPARALARVEPLFEMLEYRDAAKEAVLVLESARPPPPQIVDK
                     LLEACGVAPDCLTIIYAPTQSLAGATQIVARVLEVALHKAYELKFPLDRIVEGMAAAP
                     LAPPHPDMVVAMGRTNDAIIYAGRVHLMVVGSATDARVLAEQLPSAGSRDYGQPFAEI
                     FKRFKGDFYAIDPMLFSPGQVTVTALETGESFHAGHLNLKLLDASFS"
     gene            complement(5173..>5540)
                     /locus_tag="VIY07_11680"
     CDS             complement(5173..>5540)
                     /locus_tag="VIY07_11680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382448.1"
                     /translation="DAFQLLEVNPRPGATFDLFEPEGTSLFALHLDACRGRLPRSAPS
                     YRTAIAGAVVYAQRDILAAPAFDWPEWTADRPVPGSAVEAEQPLCSVFARGATALEAK
                     QLVEKRSAMMRRLLAEGVP"
BASE COUNT         1148 a         1739 c         1597 g         1056 t
ORIGIN      
        1 cccgcgacag gcgccgcgca acttcctgca gtacgccggc accgatgccg gcggcgacga
       61 ctggcgcgtc agccggcagc tgccctcgcg agagcacaag cataccgccg tcggtaatgg
      121 cccggatctg ggcttcggca aaatattgcg ccaatccatt ccatgccgac ggatcggcat
      181 catcaatgtc gcgtccaacg atgcgcgcaa gccgcacctg cgacgcggca atcgtcttgg
      241 cacggccgtc ggcggtcacc atctgatccg ctccgtccgg aaggctgccg aggatccgat
      301 gcacatcggc catgttggcg aagttttcgt ggatcagttc cgtccagtct cccgcgaaag
      361 gcgctcggtc ggcagtggcc atgagaaagc tgcggaccag tccggtatag acaagctcac
      421 ctgcggcaag ccgctcggca tcggtgtagc cgcgcgcggc gatagcaccg tccacaatcg
      481 gaacgatgtc tgtcgtggtc gaacccatat ccatgaatag ggaagaacca atcgctccgc
      541 tgacaacgga cgcactcgca aaccagttgg cggacgcaat gtcggtgaca tgctcgtctg
      601 cgtccgcggg cgccacaaag ccgacgcggc cggcatagat catgacacgg ctgtgtgcca
      661 attcacgcac tgccgccgca acgagtctcg caaccccaac cgtacgcgac gagaacgtgt
      721 ccgccaattc gcccgtcatg gtgaccgcgt ggcaatcggc ttgaccgatc agtgcgttgg
      781 cctctgcgaa ggcctcagcc agccgctcaa gtccaagcct tagcggcgca gcgacctgaa
      841 tcgccgctgt tatacggccg ttttcggcgc gcgccgcttt gaggtgggca ccgccgatat
      901 cccagcccac gaccgccatc gcactctcct ccaggctcaa atattcttta gtggaccaaa
      961 ccctctcgga cctgcatatc agccgatacg atagaaattg gcatggaaat cattccggtc
     1021 atcgacctta agggtggaat agtagttcac gcgcaaatgg gtcggcgaga actctaccgc
     1081 ccaatccaga ccccccttgc tcgcacgagc aatcccgtcg acgtcgtggc tggcatcata
     1141 tcaatctact cagtcgcgac cttttacatt gccgaccttg acgccatcgg aggcagcgga
     1201 agcaatcacg ccaccattgt gaaactcaaa caggcatttc cgcaagttac gctctggctc
     1261 gacaacggta tcgccgatat cgacctagcc gagaagtggc tgcagcaaga ccttggttac
     1321 ctggttctcg gcagtgagac gcaagtggac acgactgtcg ttgatcgctt ttcagaagat
     1381 cctcgcattg tgctgtcgct ggattttcgc gaagccgagt tccagggccc cccgacccta
     1441 ttgatgcacg cggaccgatg gccgcatcgc gtgatcgtca tgaccctgga tcgagttggc
     1501 agccgctcgg gaccggacat tgagcggctt cgcgtcataa aggcggcagc caaggcacgc
     1561 gcaatctatg ctgcaggagg catacgcgat gcccaggatc tgcgcacgct tgcgaccgcg
     1621 ggcatagctg gcgcgctcgt cgcatccagc ttgcacgacg gacgagttac tgcggctgac
     1681 attcaaaagc tgaaaaaatc agttgagaag ggagctcctt gcggtagctc cctgctctga
     1741 tcgacttggc cgtttcgtct tctacgccgc gaaaggatgt ttgacttgat cgcgcttgga
     1801 gacaacttcg gcgacctttg gctcgccagc gaccgcgcgt gcgatggctt ccttagtggc
     1861 gcgataattg tagtcctgta ttttcttgtc gtccgctgcc tcccagtgga tgaaaacgcc
     1921 gacacaaata aacagattgt cggcttcatt ctgcgggatc acgccttccg ccacgctgtc
     1981 agccaccgcc ttgccaaccg catgctgagc tggcccgaac atttgcaccg cttgtttcgc
     2041 gcttttgatc gtgaccttgt taaacagcac cgtcgggggt ttacacatta gatttggcgc
     2101 cacgagcgca agcagcgttg taaatccgtc cttgttgttt gtcaggcaat ttgcaaacgc
     2161 cgtttctgca gcactcccgc gcggccccat aatgagatcg atgtgcgcga cctcattacc
     2221 atcgccgacg agtgattcac caacgcatag tccactaatt tttgccatcg ccatctcctc
     2281 ccaaggaaac attacacctt caccggtcgc cgtcgtatgg cagccggcag aacggctatc
     2341 cttgttgtca gcgtccgaag ctcggaccgg ttagccagat agcggcagag gttttccgca
     2401 agcgaaagtc aatcactgtt gcccgccgtc ggcaagatgc tccgcagtcg atgcgcgaaa
     2461 agagtcgcca cagtcaggtc cgcgcttgtc cccggattga cgctcgcctg cttcagcgtg
     2521 gcatcccacg caagaacgtc ggcgagaaca tcctcgagcc ggttggcctt tccggcctgt
     2581 gcagccagtt ctgcagcttc gcggcgaact tgatccgcaa ccgacaagcc atgtttgcgg
     2641 actatatggc tgtctgggaa tgctgaaaga aagccaagat aagcagtgag cgtagccaaa
     2701 cgccgatcag acgagacacc aagcgcagct gcgaataccg gctcgccgag gtcaaaaacg
     2761 tccgcaaagt ccgttacata ttgccgagcg atgcgatcgc gatccgctgc ctcggccatg
     2821 gcctcacgca aggttaccgt cgcaggctca aaaacatcgt gaagttcggc gcgtcccagc
     2881 cctcccggcg atgccagcac gatggcacgg aacgtcaggt ccgcatcctc gcgatcaagt
     2941 cgttgtagaa ccttcgaaag cgacgactgc aggtcatacg gccgcgtctc cgctgccgcc
     3001 gcaagcggaa cgcaaagtag gataataccg agattggtat tgcttttgac agctgcgaag
     3061 cttgcctcga cggcaccgag aattcgcgcc ccgatctttt gccccgtagc tgtaagtggc
     3121 cccgtcgcag ccgccgcgct gcgctcgaaa tcggttaccg tcatacggtg gccatcggcg
     3181 aagacatgga cgttgccggg tttgggcgcg tctagctcgt cccgacatgc ttcttcaaac
     3241 gcgcgcgcga tcggatttgg ccattcaccg actggcgcca actcagacat tgcccttggc
     3301 tcgcaatgcg agccctgaga taaggtcgcc cgcaagcgtc ccggcgatat cgacgggtgt
     3361 ggttcgttgc aaacccgacc acgccggcat gctatttact tcaaggactg tcggccgttc
     3421 gtcgcgatcg tagacaatgt cgaccccggc aaaattggct ccgaccgcgg cggccgcagc
     3481 gatggcaagg tctcgcataa cgccgtctgc aactgcggca actggcttgc cgccgcgctt
     3541 tacattggtc acccaatgcg cggaatggcg catcatagcg gcgacgactc gcccctgtga
     3601 gactagcacc cgaaaatcat ggtagccgtc ccgttcgacc ccgacatatc gctgtagata
     3661 gtagaccccc gaaacttcgg caggcggcgg aagttcctgt gggctgtaga ttagtctcaa
     3721 gccacgtcct tgtgagccga acagcggctt gaggacgagt gggccggttt cccgccgtac
     3781 gatttccgcc gccgcctcaa gtgattcagc agcccaggtc gccggagtcg gcagaccggc
     3841 gcgtgaaagc aagaagctcg tcattgactt gtcgacacag cgctcgatga cccgcgcact
     3901 gttccagaca ggaatcccaa tttcttgtag cgcatgcagg acaccgagac ggagcgtcac
     3961 cgcctcaaag ctcccacctg ccatgtcgcg cacgagtacg gcgtcgggca aaccggtgcc
     4021 caaaccaggc agaatcagac ccatcggact cgtcgtgtcg aaacggcagg ccgccagcat
     4081 cagcggtcgc gctcgcgcac ccagcgcgac gaatgccttg cagagagcgc gcgcgtgcca
     4141 gtcggttgac tcggtaacga gagcgatggt cggaccggag ggggacgcac gcggcgcaag
     4201 caactcagga gaacgaggca tcgagaagtt tcaggttgag gtgtccggcg tggaagctct
     4261 caccggtttc gagcgccgtg accgttacct ggcccggact aaacaacatt ggatcgatgg
     4321 cgtagaaatc gcctttgaag cgcttgaaga tttctgcgaa gggctggcca taatcgcgcg
     4381 aacccgcgct cggtaattgc tcggccagta cgcgagcatc ggtggccgag ccgactacca
     4441 tcaggtgaac gcgccccgca tagataatgg catcgttcgt ccgccccatc gcaacaacca
     4501 tgtcgggatg cggcggcgcg agaggtgcag ccgccatgcc ttcgacaatc cggtcgaggg
     4561 gaaacttcaa ctcgtacgcc ttgtgcagag cgacttcgag cacgcgcgct acgatctggg
     4621 tggcaccagc aagactctgc gtcggcgcat agatgatggt caagcagtcg ggcgcaacgc
     4681 cgcaggcctc cagcaatttg tcaacgattt gaggcggcgg cggacgcgcg ctttccaata
     4741 ccaaaacggc ttctttcgcc gcgtctcgat actcgagcat ttcgaacaaa ggctccactc
     4801 gggcaagcgc cctggcagga ccggaaccaa gagcaaaaaa cgagtcggtg ccttttccgt
     4861 gagcgagacg ccaaccggca tattgacctg ccaagcaggc gattacggga ttgctcgaat
     4921 ggaccagtag tgtccaaggc catcgcggcg tcatggcgct cgagctgagt tgcactttcc
     4981 ccaatccgcc catacagatc tcggcaatcg ccaggcctgc tgcggtgctg ccctgcatgc
     5041 ggccgccggc gtcgatcagg gtctcgccac gttcgccttg tgcgaccgca atcttgagct
     5101 cggctttggc agccacgagc gttttgatca acgctgcggc acgggcgttc aagctgacag
     5161 cgggcgcctt gttcatggca cgccttcggc aagaagcctg cgcatcatcg cactacgttt
     5221 ctcgacgagt tgtttcgctt cgagcgcagt cgcccctcgc gcgaacaccg agcacagcgg
     5281 ttgctcggcc tcgactgcac tgccgggaac gggccgatcg gcggtccatt cgggccaatc
     5341 gaaggcgggc gctgccagga tgtcccgctg cgcataaaca acggcgccag ctattgcagt
     5401 tcgatagctc ggtgcggacc taggcagtct accgcggcag gcgtcgagat gaagagcgaa
     5461 cagcgaggta ccttccggct cgaacaggtc aaaagttgcg ccgggccggg gattaacctc
     5521 aagcagctga aaagcgtctc
//
LOCUS       DATDHO010000609         5549 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_227237, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000609 DATDHO010000000
VERSION     DATDHO010000609.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5549)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5549)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5549
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227237"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            189..383
                     /locus_tag="VIY07_11685"
     CDS             189..383
                     /locus_tag="VIY07_11685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382449.1"
                     /translation="MSQKTFTIIASVIFGVVALFHVLRIFLGWPAVVGGWTVPMWVSW
                     IGLVVAGGLSYFGINLAMRD"
     gene            complement(468..552)
                     /locus_tag="VIY07_11690"
     tRNA            complement(468..552)
                     /locus_tag="VIY07_11690"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(516..518),aa:Leu,seq:gag)
     gene            complement(698..940)
                     /locus_tag="VIY07_11695"
     CDS             complement(698..940)
                     /locus_tag="VIY07_11695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
                     /protein_id="HEY6382450.1"
                     /translation="MATLDKVAVDITVVLGTTSMPIHQVLRLGRGAIIELDASEEDAV
                     SILANNLPVAKGTVVVNGNRIAVNVAELLPRPPDMR"
     gene            1010..1789
                     /gene="lipB"
                     /locus_tag="VIY07_11700"
     CDS             1010..1789
                     /gene="lipB"
                     /locus_tag="VIY07_11700"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEY6382451.1"
                     /translation="MVNSRNTLIIGLAAPPGSPPVEWLVSDSPLAYQEAVATMERRVA
                     AIAVGQAPELIWLLEHPPLYTAGTSANPRDIVDARFPLYQTGRGGQMTYHGPGQRVAY
                     VMLDLKRRGPDVRRFVATLEEWIIRTLAAFNVRGERRDDRIGVWVRRAEKGAGREDKI
                     AAIGIRVKQWVTLHGIALNIDPDLSHFSGIVPCGVSDQRFAVTSLSDLGWRVSKAEVD
                     TVLRREFEPLFGPTIDQTVGNTENESSAAAPSRRSATVASR"
     gene            complement(1711..2016)
                     /locus_tag="VIY07_11705"
     CDS             complement(1711..2016)
                     /locus_tag="VIY07_11705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEY6382452.1"
                     /translation="MSDSIIRHVAVRGRVQGVGYRAFVEDEAYQRGLHGWVRNRRDGS
                     VEAVFAGPRATVESMVEACRRGPMGALVRAVDQREATVADLREGAAADDSFSVLPTV"
     gene            complement(2013..2477)
                     /locus_tag="VIY07_11710"
     CDS             complement(2013..2477)
                     /locus_tag="VIY07_11710"
                     /inference="COORDINATES: protein motif:HMM:NF017868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HEY6382453.1"
                     /translation="MTFYFAYGSNMDRRAMKRRCPGARALGPAVLSGYRFFVGIDGWG
                     SVATSAGDTVHGVLWRLTPRDMAALHVYELLHQGLYEIRYLPVRHGTRRVRAMIYLLR
                     RRAVGNPRPGYVEMVASAARGWKLPEPYIRSVEHWSASRWTGTRVIDAGDSA"
     gene            complement(2510..2806)
                     /locus_tag="VIY07_11715"
     CDS             complement(2510..2806)
                     /locus_tag="VIY07_11715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382454.1"
                     /translation="MANEPRRRRKAPDLETNTPPDLLPDDMRRRDPPQTPPDSMAPDD
                     EVAEEEEPVGGGFTPRIDGGNEQHPVHDEDQEDATPDDYEREIDRLDQAIRGSR"
     gene            complement(2861..3652)
                     /locus_tag="VIY07_11720"
     CDS             complement(2861..3652)
                     /locus_tag="VIY07_11720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019994943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6382455.1"
                     /translation="MRPEPEYEPKYPGAGKLKDKVAIITGGDSGIGRAVAVAMAREGA
                     KIAIVYLEEHKDANKTSELVKREGSEAILISGDVGEEKFCKTAVDKALEKFDCIDILV
                     NNAAEQHETEDVREIEAAQIQRTFRTNVFSFFYMVKHALAHMHKGGCIINTTSVTAYQ
                     GHNTLLVYSATKGAIVTFTRSLSEALVKDGIRVNAVAPGPIWTPLIPASFEPERVAKH
                     GASVPMHRPGQPNEVAPCYVFLASDEASYISGQVLHPNGGNVVGS"
     gene            complement(3767..>5549)
                     /locus_tag="VIY07_11725"
     CDS             complement(3767..>5549)
                     /locus_tag="VIY07_11725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEY6382456.1"
                     /translation="EAVHPGYGFLSEREAFAKALAAAGIVFIGPNPQAIAAMGDKIES
                     KKAAAAAKVSTVPGHLGVIASGAEAVRIAQEIGYPVMIKASAGGGGKGMRIAHNKGEV
                     AEGFARARSEAKSSFGDERVFIEKFITDPRHIEIQMLGDKHGNVIHLGERECSIQRRN
                     QKVIEEAPSPLLDAATRKKMGEQAVSLAKAVGYDSAGTVEFVAGQDKSFYFLEMNTRL
                     QVEHPVTELVTGIDLVEQMIRVAAGEKLSIKQADVNLDGWAIESRVYAEDPYRNFLPS
                     TGRLTRYRPPQEGTVNGITVRNDTGVYEGGEISLYYDPMIAKLVTHASTRGGAIAAQS
                     DALDAFVIDGIRHNVSFLAAVMAHPRWQAGKLSTGFITEEFRGGFHPQPPEGRSGEVL
                     AAVAAAIDHVLGERKRRISGQLGGRTVTRESQRAVWLGDREIKLEVKRVSGAIHVRMH
                     ADKRSEHHLASNWKPGDPVWSGTLDDKPVTVQVRDIPNGFALSHRGVESRAYVYTERE
                     AGYARLMPLRKIADTGKKVLCPMPGLVVSIAVKEGQEVKAGETVAVVEAMKMENVLRA
                     EIDGTVKKINAKPGDSLAVDAVILEFA"
BASE COUNT         1024 a         1752 c         1634 g         1139 t
ORIGIN      
        1 tgtcccctat agggccacgt ctcatgcaag gcttaaaggc tagcactttg cgaccccgat
       61 gtccgctttg ggtcataagc agacatgtgc ggtgcaacta cggatgtccg ctttgggcca
      121 aaagcgaaca tatgcctata actgatgtcc gctttaccga attattcgac tttcgaggac
      181 attgagccgt gagccagaaa accttcacga taatagctag cgtgatcttt ggagtagtag
      241 cgctgtttca tgtgttgcga atttttcttg gttggccggc cgtagtcggc ggctggacgg
      301 tgccgatgtg ggtgagctgg atcggcctcg tcgtcgccgg aggcttgagc tacttcggaa
      361 taaacctcgc catgcgtgac taacgttcgc gtcatgcccg ccttgcccct tgaaagccgg
      421 catgaaaggc tccgaaaagg aaataaatga ggagcttatt ttttcagtgg tgcggtcgag
      481 aggactcgaa cctccacggt tttcaccgct agcacctcaa gctagtgcgt ctaccaattc
      541 cgccacgacc gcatggggaa aggacgtgga ggcctgagag cctcgcgtcc aatgacggcg
      601 gaccatgtaa caaataggat gttaagggac aaggcctgcg ggcgcgcgcc gaagacttaa
      661 tttcctagca gccacaaacc ctttcggcgg ccgggtatca ccgcatgtcc ggggggcgcg
      721 gcagcagttc cgccacattg accgcgatgc ggtttccgtt cacgaccacc gtccccttgg
      781 ccaccggcag attgttcgca aggatgctga ctgcgtcttc ttcggaggcg tccagctcaa
      841 tgatcgcgcc gcggccaagc cgcagcactt gatgaatagg catggatgtg gtgccaagca
      901 ccacagtgat gtcgacggcg actttgtcga gtgtagccac gtttcttccc tatattgcgt
      961 cagaggacga tagcgagcag gtataaggtc accatggtat ggtgaacgag tggttaactc
     1021 gcgaaacacg ttgataatcg gccttgcagc gccgcccggg tcgccgccgg tggaatggct
     1081 cgtcagcgat tctcccctcg cctatcagga ggcggtggcc accatggaac gccgcgtggc
     1141 ggcaatcgcg gtcggtcagg cgcctgaact catctggctg ctggagcacc ctccgctcta
     1201 cacggcgggc acgagtgcaa atcctcgcga catcgtcgac gcgcgtttcc cgctctacca
     1261 aaccggacgc gggggacaga tgacttatca cgggcccggc cagcgcgtcg cttacgtgat
     1321 gctggatctc aaaagacgcg gcccggacgt ccggcgattc gtcgccacgc tcgaggaatg
     1381 gatcatccgc acgcttgccg cattcaatgt gcgcggcgag cggcgcgacg accgcattgg
     1441 ggtctgggtg cggcgcgccg aaaagggcgc agggcgcgag gacaagattg ccgctatcgg
     1501 tatccgcgtg aagcaatggg taacgctgca cggcatcgcg ctcaacatcg acccggacct
     1561 ttcgcatttt tccggcatcg tgccatgcgg ggtcagcgat cagcgcttcg cggtgaccag
     1621 cctttccgac ctcggatggc gtgtgtcaaa ggcggaagtc gacacggtgc tgcggcggga
     1681 gttcgagccg ctgttcgggc caacgatcga tcagactgtc ggcaataccg agaatgaatc
     1741 gtctgcggcg gcaccctccc gaagatcggc cacggtggcc tcgcgctgat cgaccgcgcg
     1801 gaccaacgcc cccattggac cgcggcggca agcctcaacc atcgattcaa ctgttgcacg
     1861 aggaccggca aacacggcct cgaccgagcc atcgcgacga ttgcgcaccc agccgtgcaa
     1921 tccgcgctgg tacgcttcgt cttcaacaaa agcgcgatag ccgacgcctt gaacccggcc
     1981 ccgcactgcc acatgtcgaa tgatgctgtc gctcacgcag aatcccccgc atcgataacg
     2041 cgggtgccgg tccaacgcga agccgaccag tgctcgacag aacggatata cggttcgggc
     2101 aatttccagc cccgcgcggc cgaagcgacc atctctacat atcctgggcg cggattgccg
     2161 acggcacgcc tccgcagcag gtagatcatg gcgcgcacac gccgcgtccc gtgacggacc
     2221 ggcagatagc ggatttcata aaggccctga tgcagcaatt catagacgtg cagcgcggcc
     2281 atgtcgcgcg gcgtgagccg ccagagcacg ccatgcacgg tgtcccctgc acttgtcgcg
     2341 accgaccccc agccgtcgat gccgacaaaa aagcgataac cgctgagcac cgctggaccg
     2401 agcgcgcgcg caccgggaca gcggcgcttc atcgcccgac gatccatgtt cgagccatag
     2461 gcgaaataaa acgtcatcaa ccccgcatac cagacctctg gcccgcctgt cagcgtgagc
     2521 cgcgaatggc ctggtccaga cggtcgattt cccgctcata gtcgtcggga gtagcgtcct
     2581 cctgatcctc gtcgtggacc ggatgctgct cgttcccccc gtcaattctt ggggtgaagc
     2641 cgcccccgac cggttcttct tcttcggcaa cctcatcatc tggtgccatg gaatccggcg
     2701 gggtttgcgg cggatcccgt cgacgcatat cgtcgggcaa cagatcaggc ggggtgttcg
     2761 tttccaggtc cggcgctttg cgccgtcgtc ggggttcgtt agccatggtc cgactccctc
     2821 ttatgtgtcg ggaaccaacg ccgccgtatt cacgaggttc ctacgagccc accacgttgc
     2881 cgccgttcgg atgcagcacc tggccgctga tatacgaggc ttcatcgctt gctaagaaca
     2941 catagcaagg agcaacctcg ttgggctgac cagggcgatg cattggcacg ctcgcgccgt
     3001 gtttggcgac gcgctccggc tcgaacgagg cggggatgag cggcgtccag atcgggcccg
     3061 gggccaccgc attgacgcgg atgccgtctt tgaccagggc ttcggaaagc gaacgcgtga
     3121 aggtaacgat cgcgcctttg gtggccgagt agacgagcag cgtgttgtgg ccttggtaag
     3181 cagtgaccga ggtcgtgttg atgatgcagc cgcccttgtg catatgcgcc agcgcgtgtt
     3241 tcaccatgta gaagaagctg aacacgttgg tgcggaacgt gcgctggatt tgcgcagcct
     3301 cgatctcccg gacatcctcg gtctcgtgct gctcggcggc gttgttcacc aggatgtcga
     3361 tgcagtcgaa tttctcgagt gccttatcga cagctgtctt gcagaacttc tcctcgccca
     3421 cgtcgcctga aatcagaatc gcctcgcttc cttcgcgctt caccagttcg cttgtcttgt
     3481 tggcgtcctt gtgttcctcg agatagacga tcgcgatttt cgcgccctcg cgcgccatgg
     3541 cgaccgcgac ggcgcgtccg atcccgctgt ctccgccggt gatgatcgcc actttatcct
     3601 tcagcttgcc cgcgcccgga tattttggct cgtattccgg ctcgggccgc atcttgcttt
     3661 caacgcccgg ccgtcctgct tttgagcagg catcgtggtt gtggacatgg aactctccga
     3721 attctctggt cggagagcga acgcgcggcc ctacggccag ttccgctcag gcgaattcga
     3781 ggataacggc atccacggcc aggctatcgc ctggcttggc attgatcttc ttgaccgtgc
     3841 cgtcgatctc ggcgcgcagg acgttctcca tcttcatcgc ttccaccacc gcgaccgtct
     3901 ccccggcctt gacttcctgg ccctctttca cggcgatcga aacgacaaga ccgggcatcg
     3961 ggcaaagcac tttcttgccc gtgtcggcga tctttcgtag cggcatcagg cgggcatagc
     4021 cggcttcccg ctcggtatag acataggccc tggattccac gccccggtgg ctcaaggcaa
     4081 agccgttcgg tatgtcgcgc acctgcaccg ttaccggctt gtcatcgagc gtcccgctcc
     4141 agacgggatc gcccggcttc cagttcgacg ccaggtgatg ctcgctgcgc ttgtcagcat
     4201 gcatgcggac atgaattgcg ccgcttaccc gcttgacctc cagcttgatt tcccgatcgc
     4261 caagccagac ggcacgctga ctttcccggg tgacggtcct gccgcccagt tgtccggaaa
     4321 tgcgtcgctt gcgttccccc aggacatgat cgatcgcggc ggcaacggcc gccagcacct
     4381 cgccagacct gccttccggc ggctgcgggt gaaaaccgcc gcggaactct tctgtaatga
     4441 acccggtcga aagcttgccg gcctgccagc gcggatgagc catcactgca gcgaggaagg
     4501 acacgttatg gcgaatgccg tcgatgacga aagcatcgag agcatcgctt tgcgcggcga
     4561 tcgccccacc gcgcgtcgag gcatgcgtca cgagcttcgc gatcatcgga tcgtagtaga
     4621 gcgagatttc accgccttca tatacgccgg tgtcattgcg caccgttatg ccgttgaccg
     4681 ttccctcctg cggcggacgg tagcgcgtca gcctccccgt cgatggaaga aaattacggt
     4741 aaggatcctc ggcgtaaacc cggctttcga tggcccagcc atcgagattc acgtcggctt
     4801 gcttgattga aagcttttct cctgccgcta cgcggatcat ctgctcgacc agatcaatgc
     4861 cggtaacgag ctcggtgacc ggatgctcga cctgcagccg cgtattcatc tccaggaagt
     4921 aaaagctttt gtcctgcccg gcgacaaact cgaccgtacc ggcgctgtcg taaccgacgg
     4981 ccttggcgag tgacaccgcc tgctccccca ttttcttgcg cgttgctgcg tcgagcagag
     5041 gactgggggc ctcttcaatc accttctgat tgcggcgctg gatcgagcat tcgcgctcgc
     5101 cgaggtggat gacatttcca tgtttgtcgc caagcatctg gatttcgatg tgacgagggt
     5161 cggtgataaa tttttcgata aagacgcgct cgtcgccgaa agaagacttc gcctccgatc
     5221 gggcacgcgc gaaaccttcc gccacttcgc ctttgttgtg ggcaatgcgc atgcccttgc
     5281 cgccgccccc ggcgctcgcc ttgatcatca cggggtagcc aatttcttgc gcaatcctga
     5341 ctgcctcggc tccgctggca atcacgccaa gatggccggg aacggtagaa actttcgccg
     5401 ccgccgcagc ctttttcgat tcaatcttgt ctcccatcgc ggcaattgct tgggggttgg
     5461 gtccgatgaa aacgatgccg gccgcggcca acgccttcgc aaacgcctcg cgctcggaca
     5521 ggaagccata gcccgggtgg accgcctca
//
LOCUS       DATDHO010000610         3617 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_227298, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000610 DATDHO010000000
VERSION     DATDHO010000610.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3617
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227298"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1326)
                     /locus_tag="VIY07_11730"
     CDS             complement(<1..1326)
                     /locus_tag="VIY07_11730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HEY6382457.1"
                     /translation="MPTLTSDIAAFVTSVEADALPERCSYGARIGMVDCVGVMIAGAG
                     EPAVQLIAATVATSTQNDGAPEIPSGRNLAAADAALVNGVAAHALDYDDVGMDGHPSA
                     ALTPAILAEGWSLGVSGKEAIAAYVAGYEVWALLQEIEPGHLHERGFHPTAIWGAIAA
                     AAACARLNRLTMDETRNAIAIAASLAAGVVANFGTMTKPLHVGRTAQAGVLAARLAKS
                     GFTGSPDALEHSSGFMRAHSPSGTPDVGLGNWQLGHEWRLPKYGINIKRYPMCYATHR
                     SIDAMLDLVHDHNLSSEAVGEVHVGIGSTQSVMLRNHDPKTALEAKFSLEFAMASAIV
                     ARRVGLAELDDAFVGRADVIENMRKVKYTTIDETLPDMPFAPEETLSIVLKSGETITH
                     PPVARPKGSWQKPLSDDELRDKFIDCAKIGLGQQDADSVFRLMNDIERLA"
     gene            1726..2667
                     /locus_tag="VIY07_11735"
     CDS             1726..2667
                     /locus_tag="VIY07_11735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382458.1"
                     /translation="MTDWQWLIIDFFQALAAGLLVGGTYGLMCVGLGIIFGVMRVVNF
                     AHGDFMMLGMYVAYYLVTGFGVLVFLGPYVGPVVGAALAGPVVYVVGWLLHKYLISRV
                     TGARVISAEAEGHYAQIILTLGIALVLANGGLILFGSTPLSVQTPLSRESWEIGLIFF
                     NQARTVGFIMAVICAIGLYLFLARTSLGKALRAAADNPIAAAYVGIDVDRSHRIAFGL
                     GVGITAIAGGLFAMSQSFQPYIGFDFVIVMYAGVVLGGMGSILGAFWGGLTIGLVQQI
                     STLVLPYQLQNTAIFVAFLIIIFFRPQGMFGRVWERT"
     gene            2667..>3617
                     /locus_tag="VIY07_11740"
     CDS             2667..>3617
                     /locus_tag="VIY07_11740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382459.1"
                     /translation="MANTRRALMWQYALIAIFAVVYLAIGSLVRNSYYQLMMTLVLIW
                     ATMGLGWNMLSGYSGMISFGHAAFFGLGAYTMTIAFVKFGITPWLGIPLGILVGVVAG
                     VLIGIPTFRLRGHYFALSMLAYPLAMLYVFEWMGYQEVSLPMKRENPAAYMQFTDQRI
                     YMVISMTVLVACMIISLHVERSRFGRSLLAIKQNQPAAEAAGINATRWKMLAMMLSAG
                     MAAAAGGLYAIILLVVTPQTVFGALVSAQALIVALFGGVGIFWGPVIGSAILIPLAET
                     LHAELGNILPGIQGVVYGLAIIVIILVAPEGIYWKVRDRVL"
BASE COUNT          626 a         1045 c         1105 g          841 t
ORIGIN      
        1 tgcaaggcgc tcgatatcat tcatgagtcg gaaaactgaa tcggcgtctt gctggccgag
       61 gccgattttt gcgcaatcga tgaatttgtc gcgtagttcg tcatcgctca agggtttctg
      121 ccagctccct ttggggcgtg ccaccggcgg atgcgtgatc gtctcaccgg atttgagaac
      181 gatactgagc gtctcctcgg gtgcgaacgg catgtcgggc aaggtttcat cgattgtggt
      241 gtatttgacc ttgcgcatgt tttcgatcac gtcggcgcga cccacaaacg cgtcgtcgag
      301 ctccgcaaga ccgacgcgtc gcgccacgat cgcggaggcc attgcgaact caaggctgaa
      361 tttcgcttcc agcgcggtct tagggtcgtg gtttcgtagc atcacgctct gagtgctgcc
      421 tatgcccaca tggacttcgc cgacggcctc ggacgagaga ttgtgatcgt gaacaaggtc
      481 gagcatggcg tcgattgaac ggtgggttgc gtagcacatc ggatagcgct tgatgttgat
      541 gccgtatttc ggcagtcgcc attcgtggcc caattgccaa ttgccaaggc caacatccgg
      601 agttccggaa ggcgagtgcg cgcgcatgaa tccggacgaa tgttccaacg cgtcgggcga
      661 gcctgtgaaa cccgacttgg ccagtcgagc ggccagcact ccggcctgcg cggtgcgtcc
      721 gacgtgcagc ggttttgtca tcgtgccgaa attggcgacg actcccgccg caagcgaagc
      781 agcgatcgca atggcatttc gtgtctcgtc catcgtcagc cgattgaggc gggcgcacgc
      841 cgccgcagca gcaatggcgc cccagatcgc cgttggatgg aatccacgct catgcaggtg
      901 gccgggctcg atctcctgta acagcgccca gacctcgtaa cccgctacgt aggctgcgat
      961 tgcctctttg ccgctgacgc ctagcgacca gccttcggcc aggattgccg gcgtgagtgc
     1021 ggcactggga tgcccatcca tgcccacatc atcatagtcg agggcgtggg cagcgacccc
     1081 attcacgagg gcagcatcgg ccgctgccag attgcggccg gagggaattt ctggtgcgcc
     1141 atcgttttgt gtcgaggtgg cgaccgtagc agcaataagt tgcacggccg gttcgccggc
     1201 gccggcaatc atgacgccga cacaatccac catgccgata cgtgcgccat agctgcatcg
     1261 ctcgggaagc gcatctgctt caaccgacgt tacgaatgcg gcaatgtccg acgttagcgt
     1321 gggcatggat ggaaatcccc cttgcaagtc ttggtagtgc gcaactccga cgtccgacaa
     1381 aacttgacgg cttgaacgca tcaaccgtaa cctgatcaaa agtatcaaca caatgggcgc
     1441 atagaaaatt ttgccatcgt gcgttcacca gcgtcgctcg ggaggatggc gcatgaagtt
     1501 gagaaatgat cgccatttgg cgcacggttt cgatcccata agaaatcgcg gttaggtcac
     1561 catgtaccga cccggtgaac cgttctcgat ggctggtcga tggggagcta cttgcgtccc
     1621 cgctgggctg gaagatttcg tttgctgacg aaacttgacg cggcaccgac gccgctgagt
     1681 cattagcggc cgccgaactc cgggttgacg cccagggata cgatcgtgac cgactggcag
     1741 tggctcataa tagatttctt tcaggcgctg gcagcaggcc tgctggtcgg cggcacttat
     1801 ggcctcatgt gcgtcgggct cggcattatc ttcggcgtga tgcgcgtcgt gaatttcgcg
     1861 catggcgact tcatgatgct cggcatgtat gtggcatatt atctcgtcac tggttttggc
     1921 gtactggtgt ttcttggccc gtatgtcggt cctgtcgtcg gggcggcgct cgcggggccg
     1981 gtggtctacg tcgtcggttg gctgctgcac aagtacttaa tttcgcgcgt taccggcgca
     2041 cgcgtcattt cggccgaggc cgaggggcac tacgcgcaga tcatcctcac cctcggcatc
     2101 gcgctggtgc tggcgaatgg cggcctgatc ctgttcggat ccacgccgtt gtcggtgcag
     2161 acgccgcttt cgcgtgaatc ctgggagatc ggtctcatct tcttcaatca ggcccgcacg
     2221 gtcggattca tcatggcggt catctgcgcg atcggactct atctcttcct cgcgcgcacc
     2281 agtcttggca aggcgttgcg cgcggctgcc gacaatccga tcgccgcggc ctatgtcggc
     2341 atcgacgtcg accgctcgca ccgtattgca ttcggtctcg gcgtcggcat cacagcgatt
     2401 gccggcgggc tattcgcgat gtcgcagtcg ttccagccct acatcggctt cgattttgtc
     2461 atcgtgatgt atgccggcgt ggtgcttggt ggcatgggtt cgatcctcgg cgccttctgg
     2521 ggcggcctga cgatcggctt ggtgcagcag atttctacgc tcgttctgcc ctatcagctg
     2581 cagaacaccg cgatcttcgt tgcctttctc ataatcatct tcttccggcc gcagggaatg
     2641 tttggccgcg tctgggagcg aacctgatgg cgaatacacg acgcgcgctc atgtggcagt
     2701 acgcgttgat tgcgattttc gcggtcgtgt atcttgcgat cggctctctg gtgcgaaatt
     2761 cctactacca gctcatgatg acactggtgc tcatctgggc cacgatgggc ctcggctgga
     2821 acatgctgtc cggctacagc ggcatgatct cgtttggcca cgcagcgttc ttcgggctcg
     2881 gcgcctacac gatgacaatc gcgttcgtga agttcggcat cacgccgtgg ctcggcattc
     2941 cgcttggcat tctcgtcggc gtggtggcgg gcgtgctcat tggcatcccg acgttccgcc
     3001 tgcgcggcca ttacttcgcg ctctcgatgc tcgcctatcc gctcgccatg ctctacgtgt
     3061 ttgaatggat ggggtatcag gaagtctcgc tgccaatgaa gcgcgagaat ccggccgcat
     3121 acatgcaatt caccgatcag cgcatctaca tggtgatctc gatgaccgtc ctagtcgcat
     3181 gcatgatcat atcgttgcat gtcgaacgtt cacgcttcgg ccgctcattg ctggcgatta
     3241 agcaaaatca gccggccgcg gaagctgcag gcatcaacgc cacgcgatgg aagatgttgg
     3301 cgatgatgct cagtgccggc atggcggcag ccgccggggg gttgtacgcc attattctgc
     3361 ttgtggtgac gccgcaaacg gtgttcggtg ccctcgtttc cgcgcaggcg ctgatcgttg
     3421 ctctgttcgg cggcgttggg attttttggg ggccggtgat cggatcagca atcttgatcc
     3481 cgctggccga gacgctgcac gcagaacttg gcaacattct tccgggcatt cagggggtcg
     3541 tgtatgggct agcaatcatt gtcattatct tggtcgcgcc cgagggaatc tattggaagg
     3601 tgcgtgaccg cgtcttg
//
LOCUS       DATDHO010000611         1511 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_425992, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000611 DATDHO010000000
VERSION     DATDHO010000611.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1511)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1511)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1511
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_425992"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..580)
                     /locus_tag="VIY07_11745"
     CDS             complement(<1..580)
                     /locus_tag="VIY07_11745"
                     /inference="COORDINATES: protein motif:HMM:NF015338.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEY6382460.1"
                     /translation="MTWNIHGALGRNPRFDLTQVVNLIRSWDPDIVALQEVDSRRAFA
                     EGVNPFEFLPGAVGTYGIGAKTLTSTDGDYGQMLISRFPIGAHEILDISFREREPRRA
                     IRAEIATSLGPMTVVATHLGLSIRERQSQARALVGLASARGTTVILGDFNDWFWPGSV
                     RSVLSHIFSGRTRYRTFPAKFPLLRLDRIYCRP"
     gene            complement(607..1356)
                     /locus_tag="VIY07_11750"
     CDS             complement(607..1356)
                     /locus_tag="VIY07_11750"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEY6382461.1"
                     /translation="MQNVADPEQPIGAEEFVSQVFGGYVPTRNMATVLKVIGAGLFVV
                     ALALIWELAPLFGPETIQSALASIADNGAAPLIVIAVFVAAGFALFPVTVLIAATAAA
                     FGPWLGFAYAAAGALASAIATYAIGAAIGRRTLRDFLGPRLNRVRQRVARRGVIAIAA
                     IRLVPVAPFTVVNLVAGASSIPLFEYVAGTVLGMLPGLVMISAVGHQLARILSAPTTN
                     DLIVLIAAVTAWIAVSIGIQAIVSRYWGASQ"
BASE COUNT          355 a          454 c          440 g          262 t
ORIGIN      
        1 gcgggcgaca atagatgcgg tctagccgca gcaaggggaa ttttgccgga aaagtccggt
       61 aacgcgtgcg tccactgaaa atgtgggaca ggaccgaacg aaccgatccc ggccagaacc
      121 agtcgttgaa atcgccgaga atgacggtcg tccctcttgc ggacgcaagt ccaaccaaag
      181 cccgagcctg gctttgccgt tctcgaatgc tcaagcccag atgggttgca acgacggtca
      241 tcggcccaag cgaagtagcg atctccgcgc gaatggcgcg acgtggctcg cgctcccgaa
      301 atgagatgtc aagaatctcg tgcgccccaa tgggaaagcg acttatcaac atttgtccgt
      361 agtcgccatc cgtgctggtc agcgttttgg cgccaatgcc atatgtccca actgcgccag
      421 gcagaaattc gaacgggttg acgccctcgg cgaaggcgcg gcgcgaatct acttcctgga
      481 gtgcgacaat gtcggggtcc cagcttcgaa taaggttgac cacttgggtc aagtcaaaac
      541 gtggattgcg gccaagcgcg ccgtggatat tccacgtcat gactcgcacg actctttccg
      601 gttttctcac tggctggcgc cccaataccg cgagacgatc gcctggatac cgatcgaaac
      661 cgctatccac gccgtgacag cggcaatgag gacgataagg tcgttggttg tgggcgcgct
      721 aaggatgcgc gcaagctgat gaccaactgc agagatcatc accagacctg gaagcatccc
      781 caataccgtt ccggccacgt actcgaacaa gggaatcgag ctcgcgcccg ccaccaggtt
      841 cacgaccgta aacggcgcaa cgggcacaag ccgaattgcc gcaatggcta tcacgccgcg
      901 ccttgccacg cgttgacgga ccctgttgag acggggccca agaaaatctc gcaaggttcg
      961 cctgccgatt gcggcgccga tggcatatgt ggcaatcgcg ctcgccagcg ctcccgccgc
     1021 agcgtatgca aatccgagcc aggggccgaa tgccgctgca gtcgccgcaa tcagcacggt
     1081 cacagggaat aatgcgaagc cggcggcaac aaaaacggca atgacgatga ggggggcggc
     1141 gccattgtcg gcaatcgaag cgagcgcgga ttgaatcgtc tccggtccaa agagcggtgc
     1201 aagctcccag attaaagcga gggctaccac aaagagtccg gcaccaatca ccttaaggac
     1261 ggtggccata tttcgagtcg gcacatagcc gccaaacacc tgactgacga attcctcggc
     1321 accgatcggt tgctcgggat cggccacgtt ttgcacgaag gccaatacct catttgagcc
     1381 tgatggcaca tcgatcacag gaacgagtct gtgaccccag cctgatagcg attgcgctac
     1441 gacagtagcg aaccacctga ctgcgcaaat gcagctgcga ccttgtcagg cgatacgccg
     1501 cagtggtcgc c
//
LOCUS       DATDHO010000612         5193 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_129044, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000612 DATDHO010000000
VERSION     DATDHO010000612.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5193
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129044"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            123..548
                     /locus_tag="VIY07_11755"
     CDS             123..548
                     /locus_tag="VIY07_11755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEY6382462.1"
                     /translation="MSIQFVLLPLFVEVLLTFGVMFGMMYFRTSTLQRGETRFEDIAL
                     REPNWPVQATKFGYAFANQFELPVLFYVLTILEIITKHADLLFVILAWIFVVMRILQA
                     GVHVTNNNVRVRGGFYGVGAIVLLIMWIIYIVRILLALP"
     gene            545..1846
                     /locus_tag="VIY07_11760"
     CDS             545..1846
                     /locus_tag="VIY07_11760"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEY6382463.1"
                     /translation="MTPAARLAAAIEVFALIEKERRPAADALKAWGLTHRFAGSGDRA
                     AIAGLVYDALRRRSSSAFIMGSDTPRAILLGMLKRERRLDSEAIARLADGSRYAPEAL
                     TSEERKRLDAADISNAPAHVAGDYPEWLDDHLARVFGAARVEEGEALASRAPLDLRAN
                     TLKGERDAAAAMLSDLNTEPTRWSPWGLRVRVSADAKSPSIHAEPAFIKGLVEVQDEG
                     SQVAALLSAAKPGEQVVDLCAGGGGKTLAMAAMMENKGQIFATDDDKRRLAPIHDRLK
                     RAGARNVQVRSPKSVGGEIDDLAGRMDLVLIDAPCTGTGAWRRNPDAKWRMRPGALEQ
                     REKEQVEILDRAVGLLKPGGRIVYVTCSVLDEENGGQVRAFLSRHSGFSVQPTAAVAQ
                     PLGERAFMFGKAAQVSGEGILLTPRSTDTDGFFVSVMRSGR"
     gene            2071..3003
                     /locus_tag="VIY07_11765"
     CDS             2071..3003
                     /locus_tag="VIY07_11765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382464.1"
                     /translation="MQLFGSLVAVLVGIGSGYSFYRANFSPEATCQTLRSGIIALLDK
                     SVDAAARRVLVRRDIETFERTCAVVDPEATAAFKSLLAAEKAAAPPPAPATAAPAAPP
                     AAPPASPKAQRGEPAQAQRSEPAPKEPVRKPEPRPQGTAKQPPANTAPVTPEPTRRDA
                     AVSDAQWLEAVRQALITQKPDRRPVEAAKPSVVAPVARPVTQEPPVQPPADVRPVARP
                     VTQETPLQPPADIRPDPATPAVAPALPRPITIPPAPAQRVDADHPVPPESIPDAVPPA
                     TVSKAKPDEPDRSRIGKWISEIPLLGPALDNGRR"
     gene            3151..4698
                     /gene="guaA"
                     /locus_tag="VIY07_11770"
     CDS             3151..4698
                     /gene="guaA"
                     /locus_tag="VIY07_11770"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEY6382465.1"
                     /translation="MHEKVLIVDFGSQVTQLIARRVREEKVYSEIVPYQNAEEAFREM
                     KPKAVIFSGGPASVLDKNAPLAPKAIYEAGVPLLGICYGEQAMAQQLGGKVEGGHHRE
                     FGRAEVTVTENTPLFDGVWRKGEKYPVWMSHGDRVTELPQGFKVLGTSPNAPIAIIGD
                     DKRKFYATQFHLEVIHTPHGAALLRNFVRKIAGLTGDWTMRAFRDEAIEKIRKQVGKE
                     RVICGLSGGVDSAVAAVLIHEAIGDQLTCVLVDHGLMRLGEAQKVVTMFRDSYNIPLV
                     HVDASDKFLKALEGVEDPEQKRKTIGRLFIDVFEAEAKKLGGAEFLAQGTLYPDVIES
                     VSFTGGPSVTIKSHHNVGGLPERMNMKLVEPLRELFKDEVRVLGRELGLPEAFVGRHP
                     FPGPGLAIRCPGAITREKLDILRLADEIFIEEIRRTGQYDDIWQAFAVLLPVKTVGVM
                     GDYRTYDYVVGLRAVTSTDGMTADFYSFDMKFLGLVATRIINEVKGVNRVVYDVTSKP
                     PGTIEWE"
     gene            4706..5062
                     /locus_tag="VIY07_11775"
     CDS             4706..5062
                     /locus_tag="VIY07_11775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HEY6382466.1"
                     /translation="MPITIYGIKNCDTMKKARSWLDKNGIEYTFHDYKTAGIDRNSLE
                     RWAKKVGWETLLNRAGTTFKKLPEKDKSNLSAANAIGLMLKQPSMIKRPVLDVGGGRL
                     MVGFDPEAYKATLTAR"
BASE COUNT          997 a         1587 c         1619 g          990 t
ORIGIN      
        1 cgcatcaccg gcgccggcct tcgtgaaagc catgtgcacg acgtgacaat tacccgcgag
       61 agcccgaact atccaagccg tgtatagtta ttcgtgcttg ggaaggatga gagggctgag
      121 ccatgtctat tcagttcgtg cttttgccgc tttttgtcga agtgctgctt accttcggcg
      181 tgatgttcgg gatgatgtat ttccgcacgt ccacgctgca aaggggggaa acacggtttg
      241 aagacatcgc cttgcgcgag ccgaattggc cggtgcaagc cacaaagttc ggatatgcat
      301 ttgccaatca gttcgagctt ccggtgctgt tttatgtgct gacgattctc gaaatcatca
      361 ccaagcacgc cgatttgctg ttcgtgattc tcgcctggat tttcgttgtg atgcgcatat
      421 tgcaggctgg cgtgcacgta accaataata acgtgcgcgt gcgcggcgga ttctacggcg
      481 tgggcgcgat cgtgctgctc attatgtgga tcatatacat cgtccgcatc ctccttgccc
      541 tcccatgacg ccggcggcac gactcgctgc cgcgatcgaa gtcttcgcct tgatagagaa
      601 agagcgacgg ccggccgccg atgcgctcaa ggcctggggc ctgacccacc ggtttgccgg
      661 ctcgggcgac cgtgccgcga tcgccggtct cgtctacgac gcgctgcgac gcaggtcgtc
      721 gagcgcattc atcatgggct ccgacacgcc gcgggcaatt ctcctcggaa tgctcaaacg
      781 cgagcgccgg ctcgatagcg aagcaatcgc aagacttgcc gacggctcgc ggtatgcgcc
      841 cgaggcgctg accagcgagg aacgcaaacg ccttgatgct gccgacatat caaacgctcc
      901 cgctcacgtc gccggcgact acccggaatg gctcgatgat catctggcac gcgtcttcgg
      961 cgcggcgcgc gttgaggagg gtgaggcgct cgcctcgcgc gcaccgctcg acctaagggc
     1021 caatacgctc aagggcgagc gtgatgccgc ggccgccatg ctgtccgacc ttaacaccga
     1081 gcccacgcgg tggtccccct ggggcttgcg ggttcgcgtt tcggccgatg cgaagagtcc
     1141 ctcgatccat gccgagccag ctttcatcaa aggcctcgtc gaagtgcagg acgagggctc
     1201 gcaggtggcg gcgttgctct ctgccgcgaa gccaggggaa caggtcgttg atctgtgcgc
     1261 gggcggaggc ggaaaaacct tggccatggc ggcgatgatg gagaacaagg ggcagatttt
     1321 cgccaccgat gacgacaaaa ggcggctcgc gccgatccat gaccggttga aacgggcagg
     1381 tgcgcgcaat gtacaagtcc gctctcccaa atccgtcggc ggcgaaatcg acgatctggc
     1441 cggacggatg gatcttgtgc tcatcgatgc gccttgcacg ggcaccggcg cgtggcggcg
     1501 caatccggat gccaaatggc ggatgcggcc gggtgctctc gaacagcgcg agaaagagca
     1561 ggtggagatt cttgatcgcg ccgtagggtt gctcaagccc ggcgggcgca tcgtttacgt
     1621 cacgtgctcc gtgctcgacg aagaaaacgg cgggcaggtt cgggcattcc tgtcgcgcca
     1681 ttccggattt tcagtacagc cgacggccgc cgtggctcag ccgctgggcg agcgcgcgtt
     1741 catgttcggc aaggcggcac aggtgtcggg ggagggcatc ctgctgaccc cccgctcgac
     1801 cgacactgat gggttctttg tctcggtgat gaggagcgga cggtagggtt ccccgccctg
     1861 cctatgggaa taccccgatt gcgccccaat cccggcccaa tttttccgcg ataatccagt
     1921 gtctgtggca gagcttttcc ttggggtttt ccgatgctgg tggccaggcg cgatccgccg
     1981 tttcattcgg acgcggaccc tcgggcgccc cttaatccga attcccccct gactccccga
     2041 gcatcaaagc tgccccgctt tgtaatgttc atgcagctgt ttggctcgct ggtggctgtg
     2101 ctcgtaggca tcggcagtgg ctattcgttc taccgcgcta acttttcccc tgaggcaacg
     2161 tgtcagactt tgcgcagcgg cattattgct ctgctcgata agagcgtgga cgccgcggcc
     2221 cggcgcgtcc tggttcgccg cgatattgag accttcgaga gaacctgcgc tgttgtcgac
     2281 ccggaagcca ccgcggcatt taagagtttg ctcgccgccg agaaagcagc ggcaccgcct
     2341 ccagcacccg caaccgccgc accggccgcg ccgccagctg cgccgcctgc ttcgccgaaa
     2401 gctcaacgcg gtgagccggc tcaagcgcaa cgcagtgagc cggcaccgaa ggagcctgtg
     2461 cgcaagcctg agccgcgccc gcaaggaacc gccaagcagc caccggcaaa tacagcccct
     2521 gtcactccag agcccactcg tcgggacgcc gctgtttcgg atgcccaatg gctcgaggcc
     2581 gtgcggcagg ctctcataac tcagaagccc gaccgacggc cggtcgaggc cgcgaagccg
     2641 tctgttgtgg caccggtcgc gcggccggtg acgcaagagc ctcccgtgca gccgcccgcg
     2701 gacgttaggc ctgtcgcacg gccggtgacg caagagactc ctctgcaacc cccggcggac
     2761 attaggcccg atccagcgac acctgcggtt gcgccggcct tgccgcgccc gatcacgatc
     2821 ccgccggcgc ccgcgcagcg ggtcgatgcg gatcatccgg tgccgcccga atcgattccg
     2881 gacgccgttc cacctgccac tgtaagcaag gccaagcctg atgagccgga ccgatcacgc
     2941 atcggcaagt ggatatcgga aattccgttg ctgggccctg cgctggataa tggccgtcgc
     3001 tgagcggctg ctggttacgt agtccgccac gcacaactcg ctgatcggcg atccggcagg
     3061 cttgaccccg ctgcacaaag cccgcaaaaa gctgccccga acggcctttg cgcacccgat
     3121 tctgggtacg ttcgggacac atcgccgtcc atgcacgaaa aagttctgat cgtcgacttc
     3181 ggctcccagg ttacccagct catcgcgcgc cgggtgcggg aggaaaaggt ctattcagag
     3241 atcgtgccct accagaacgc cgaagaggcg ttccgtgaaa tgaagccgaa ggcggtgatt
     3301 ttttccggcg gacccgcctc cgtcctggac aagaacgcac cgctggcgcc aaaggcgatc
     3361 tatgaggccg gtgtgccgct gctcggcatc tgctacggcg agcaagccat ggctcagcag
     3421 ctcggcggca aggtcgaagg cggccatcat cgggagttcg gccgagccga ggtgaccgtt
     3481 accgagaata cgccgctgtt tgatggcgtg tggcgcaagg gcgagaaata tcctgtctgg
     3541 atgagccatg gtgatcgcgt cacggagctg ccgcagggct tcaaggtgct cgggacatca
     3601 cccaacgcgc cgattgcgat catcggcgac gacaagcgca aattttacgc cacccaattc
     3661 cacctcgaag tgattcacac cccgcacggc gccgcgctgt tgcgcaattt cgtccgaaag
     3721 atcgccggtc ttaccggcga ctggaccatg cgcgccttca gggatgaggc aattgaaaaa
     3781 attcggaagc aggtgggaaa ggagcgggtg atctgcggtc tctccggcgg cgtagatagc
     3841 gcagtggccg cggtgctgat ccacgaagcg atcggcgacc aactcacttg cgtgctggtc
     3901 gatcacgggc tgatgcggct tggcgaggcg cagaaggtcg tgacgatgtt tcgcgacagc
     3961 tacaatatcc ctcttgtgca cgtcgatgca tccgacaagt tcctcaaggc gctcgaaggc
     4021 gttgaggacc ccgagcagaa gcgcaagacg atcggaaggc tgttcatcga tgttttcgag
     4081 gccgaggcga agaaactcgg cggcgccgaa ttcctggcgc agggtacgct ttatccggac
     4141 gtgatcgaga gcgtgtcgtt caccggcggg ccctccgtaa ccatcaagtc ccatcataat
     4201 gtcggcggct tgcccgaacg catgaatatg aaattggtcg agccgctgcg cgaattgttc
     4261 aaagacgagg tgcgggtact tgggcgcgag ctgggtttgc cggaggcttt tgtcggcagg
     4321 catccatttc ccgggcccgg tctcgcgatc cgatgccccg gcgcgatcac gagagagaag
     4381 ctcgatatcc tgcggctggc cgacgagatt ttcatcgagg aaattcgccg gacgggccag
     4441 tacgacgata tctggcaggc gtttgccgtg ctgcttccgg tgaaaaccgt cggcgtcatg
     4501 ggagactatc gcacttatga ctatgtcgtc ggcctgcgcg cggtgacatc gaccgacggt
     4561 atgacggccg acttctattc cttcgacatg aagtttcttg gcctggtggc gacgcgcatc
     4621 atcaacgagg tcaaaggcgt caatcgcgtc gtctacgatg tgacctcaaa gccgcctggc
     4681 actatcgagt gggagtgatc acgtcgtgcc tatcaccatc tacggcatca agaattgcga
     4741 caccatgaag aaagcccgtt cgtggctcga caagaacggg attgaataca cgttccacga
     4801 ctacaagacg gcgggaattg accgcaacag tctcgagcgc tgggcgaaaa aagtcggttg
     4861 ggaaactctc ctgaaccgcg ccgggacgac attcaagaag ctgccggaaa aagacaaaag
     4921 caatctctcc gcagccaacg cgatcgggtt gatgcttaag cagccatcga tgatcaagcg
     4981 tccggtgctc gacgtgggcg gcggcaggct gatggttggc tttgatcctg aagcctataa
     5041 ggccacgttg accgctcgat aatcagcgca cggagcctct cgggatattg ccgggcgttg
     5101 cagcgggcga cggcttgatt ttgccggcat ttacggccac atgcggcgca tgaataagcc
     5161 cattgcctcg cccgattcga tgtccacgac gcc
//
LOCUS       DATDHO010000613         2721 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_227385, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000613 DATDHO010000000
VERSION     DATDHO010000613.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227385"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            64..1572
                     /locus_tag="VIY07_11780"
     CDS             64..1572
                     /locus_tag="VIY07_11780"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEY6382467.1"
                     /translation="MMNWPILSVVTFLPLLGALLVAFLVHGNERLARGTARWVALWAT
                     LVTFAISLVMVWRFDAGSPEFQYVEKYNWLGIASYHMGVDGISLPFVILTTALMPICI
                     LASWTAIQTRVKEYMIAFLVLETLMVGTFSALDLVLFYLFFEGGLIPMFLIIGVWGGP
                     RRVYASFKFFLYTLLGSVLMLLAIMAMYWEAGTTDMAALLRHGFPIGLQKWAWLAFFA
                     SFAVKLPMWPVHTWLPDAHVEAPTAGSVILAAILLKMGGYGFLRFSLPMFPAASHEFA
                     PLIFALSVVAIVYTSLVALVQEDVKKLIAYSSVAHMGFVTMGIFAATAQGVAGGIFQM
                     ISHGIVSGALFLCVGVVYDRMHTREIEAYGGLVNRMPLYAFVFMVFTLANVGLPGTSG
                     FIGEFLALVGTFKVNIPVATLATLGVILSAAYALWLYGRMIFGKLKPSLEGIRDIGWR
                     ECVIFAPLVALTILFGVAPKPVLDISAASVAQLLENYNHAIAAAKTAALTAQ"
     gene            1580..>2721
                     /gene="nuoN"
                     /locus_tag="VIY07_11785"
     CDS             1580..>2721
                     /gene="nuoN"
                     /locus_tag="VIY07_11785"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEY6382468.1"
                     /translation="MNQAPTLLELAPLLPELVLACGAMLMLMIGVVIGERSAAMVNIW
                     CVAVLVLAGAALAWVPQGSHAMFGGSFLVDDYARFLKMLTLVGSAGALLLSLDYLTLE
                     RQQKFEYGALVLLATLGMLMLISASDLIALYLGLELMSLPLYVIAASNRESEKSTEAG
                     LKYFVLGALSSGMLLYGASLIYGFTGTVNFAGIARATQGGAGIGLIFGLVFLFVGFCF
                     KISAVPFHMWTPDVYEGAPTPVTAFFAAAPKVAAIAIFARATVVAFPGITQQWQQIVV
                     FVSIASMALGAFAAIGQRNFKRLMAYSSIGHMGYALVGLAAGTPEGVQGVLVYMSIYV
                     VMTLGTFAVILAMRRDGKLVENIGDLAGLARTHPTMAFFLGVLLFSL"
BASE COUNT          402 a          800 c          824 g          695 t
ORIGIN      
        1 cttcgcgatg ctgatcggcg ccgcagcttt cattacctgg ttcatgttcg cgacggggac
       61 gcactgatga attggcctat tctctccgtc gtgacgttcc tgccgctgct cggcgcattg
      121 ctggttgcat ttcttgtgca cggaaacgag cgtctggcgc gaggcactgc gcgctgggtg
      181 gccctgtggg cgaccctcgt gacgtttgct atttcgctgg tcatggtctg gcggtttgac
      241 gccggatcgc ctgaattcca gtacgtcgaa aaatacaact ggcttggcat cgcctcctat
      301 cacatggggg tcgacggaat ttcgctgccc ttcgtgatcc tcacgaccgc gctgatgccg
      361 atctgtattc tcgccagctg gactgcgatc cagacgcgcg tgaaggaata catgatcgcc
      421 ttcctggtgc ttgaaacatt gatggttggc accttttccg cgctcgatct ggtgctgttc
      481 tatctgtttt tcgaaggcgg ccttatcccc atgttcctga tcatcggtgt ctggggcggt
      541 ccacgccgcg tctatgccag cttcaagttc ttcctctaca cgctgctcgg ctccgtcctg
      601 atgctgctcg ccatcatggc gatgtactgg gaagccggaa cgacggatat ggcagccctc
      661 ctgcgtcacg ggttcccgat cggcctgcag aaatgggcct ggcttgcgtt ctttgcctcg
      721 ttcgccgtga agttgccgat gtggccggtg catacgtggc tgcccgatgc gcatgtcgaa
      781 gcgccgacgg caggctcggt gatcctcgcc gctatcctcc tgaaaatggg cggctatggg
      841 tttcttcgct tttccctgcc gatgttcccc gcggcgagtc atgaattcgc gccactgatt
      901 tttgcgctct ctgtcgtggc gatcgtctac acatcgctgg tggcgcttgt tcaggaggat
      961 gtgaagaagc ttattgccta ttcctccgtt gcccacatgg gctttgtcac catggggatc
     1021 tttgcagcga ccgctcaggg cgttgccggc ggcatcttcc agatgatctc tcacggtatc
     1081 gtttccggcg cactgtttct ctgcgtcggc gtggtctatg accgcatgca tacgcgcgaa
     1141 atcgaggcct atggcgggct ggtcaaccgg atgccgctct atgccttcgt cttcatggtg
     1201 ttcacgctgg caaatgtcgg cctgccgggt acttcgggtt tcattggcga atttctcgca
     1261 ttggtcggta ctttcaaggt gaatatcccg gttgcgacgc ttgcgaccct cggcgtcatc
     1321 ctgtcggctg cctatgcgct gtggctctac ggcaggatga ttttcggcaa gctcaagcct
     1381 tcgctggaag gcattcgcga cattggctgg cgcgaatgcg tgatcttcgc gccgctggtc
     1441 gcactcacta ttctctttgg tgtcgcgcca aagccggtgc tcgacatatc ggcggcttcg
     1501 gttgcgcaac tgctcgaaaa ctacaaccac gccatcgccg cggccaagac tgccgcgttg
     1561 acggcccagt aggccgcgca tgaaccaggc accgaccttg ctcgagttgg cgccgctgct
     1621 gccggagctc gtgctggcat gcggagcgat gctgatgttg atgatcggcg tggtcatcgg
     1681 cgagcgcagc gccgcaatgg tcaacatctg gtgcgtggcc gtgctggttt tggccggcgc
     1741 cgccttggcc tgggtgccgc agggatctca cgccatgttt ggcggcagtt tcctcgtcga
     1801 cgactatgcc cggtttctga aaatgctgac cttggtcggg tctgccggcg cgctcctgct
     1861 ttccctcgac tatttgaccc tcgagaggca gcagaagttc gagtatggcg cgctggtcct
     1921 gctggccacg ctcggcatgc tgatgctgat ttcggcatcc gatctgatcg ctctctatct
     1981 cggtctcgag ttgatgagcc tgccgctcta cgtcatcgcg gcatccaatc gcgagagcga
     2041 aaagtcgacc gaggcggggc tgaaatattt cgtgcttggg gcgctttcgt cgggaatgct
     2101 gctctatgga gcgtcgctca tctacggctt cacgggcacg gtgaattttg ccgggattgc
     2161 cagggcgacg cagggtgggg ccggcatcgg cctgattttc ggcctggtct tcctgttcgt
     2221 cgggttctgt ttcaagattt cggccgtgcc gttccatatg tggacgccgg atgtttatga
     2281 aggcgcgccg actcccgtca cagccttctt tgccgccgct cccaaagtcg ccgcgattgc
     2341 catctttgcg cgcgcgaccg tcgttgcgtt tcccggcatt acacagcagt ggcagcagat
     2401 cgtggttttt gtctcgatcg cttcgatggc gctcggtgcc ttcgccgcaa taggtcagcg
     2461 caatttcaag cggctaatgg cttactcatc gatcggtcac atgggttacg cgctggtcgg
     2521 ccttgcggcg ggaacgccgg agggcgtgca aggcgtgctt gtgtacatga gcatctacgt
     2581 cgtcatgacg ctggggactt tcgcggtcat cctcgccatg cgacgcgatg gcaagctggt
     2641 ggagaacatc ggcgatctgg ccggcctcgc acgaacgcat ccgaccatgg catttttcct
     2701 gggcgtactt ttgttttcgc t
//
LOCUS       DATDHO010000614         4186 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_471740, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000614 DATDHO010000000
VERSION     DATDHO010000614.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4186
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471740"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..768)
                     /locus_tag="VIY07_11790"
     CDS             complement(<1..768)
                     /locus_tag="VIY07_11790"
                     /inference="COORDINATES: protein motif:HMM:NF013594.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEY6382469.1"
                     /translation="MTSGTGIYFDGVTSVRREAVVELTPAALKISGPDGHLWGEWPYS
                     EIEELAAPDSMLRLGRRGSPTLERLEIRDSAFAKEIDALAIHVGRTGLLQRRQRMRVI
                     GWTFAATASLVLVAWFGLPAIAERLAPLLPPSVERKLGDAVDIQVRGMLDPGKGGAPF
                     ECGTAAVETAGRAALDKLMRRLEAAAMLPMPLRTRVARRDEANAIALPGGHIYVFRGL
                     IDKADNADQIAGVIAHEIGHVANRDGTKAMLEGAGLSF"
     gene            complement(798..2048)
                     /locus_tag="VIY07_11795"
     CDS             complement(798..2048)
                     /locus_tag="VIY07_11795"
                     /inference="COORDINATES: protein motif:HMM:NF017770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HEY6382470.1"
                     /translation="MASFDAGGIATNGGVRFLGQRRSYWRLLIRGAALLMVTLGIYRF
                     WLVTDIRRFLWSNTEIAGEALEYTGTALELLLGFLIAIALLIPIYTAFFLAALDLGLL
                     GQLSGLIAFAALAVLGQYAIYRARRYRLTRTVYRGLRFHQKGSAWAYAFRAIAWWTVT
                     VLTFGLAYPFQLASLERYKMKNTFYGDLAGRFESSGFALLLRGLPIWLLFFAPLALAV
                     RVFVGLDWQALIDAVAQGGDDVMGKIEGGNPGLGSAVVFAMLMGGISITLGALLYPAF
                     QTLILRWWSSGLRFGELKVHSRLLVRHVYGAYARFVGYAGLFGVAMAIAGTAALLLTD
                     ALAGSDASGQIATTLVLLVGYVIAALGISTIYRATVLFSLWQLGMESLQLSGLSALEK
                     VKASGRPSSAFGEGLADALNVGSY"
     gene            complement(2195..3580)
                     /locus_tag="VIY07_11800"
     CDS             complement(2195..3580)
                     /locus_tag="VIY07_11800"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY6382471.1"
                     /translation="MSRRMMAGGGSVVILEDVTESKRAQERITHLAKYDELTGLANRN
                     HFRERINGMLAAMHKGRNHIAIHLIDLDRFKSVNDTLGHPIGDKLLKEVASRLKTVIR
                     PGDMITRFGGDEFVVLQVGTERYQDAKWLAQRLARTLKDPFDIDGHRIDIGASIGIAM
                     APMDGVDADQLLKKADMALYAAKNGGGGDHRFFALEMEEAAQERRALELDLREALASE
                     QFQLHFQPLVDLRTGRVTTCEALLRWKHPSRGMVPPSVFIPIAEETGLIIALGEWALM
                     HACFEAAKWPKSVKVAVNLSPVQFRDRGLALHVVSPLAKSGLPAQRLELEVTERLLLE
                     DNDGTLAAMEQLKNLSVGISLDDFGTGYSSLNYLRKFPFQKIKIDQSFIAGLGEERDA
                     QAIIGAVAGLGARLDKVVVAEGIETEEQMKQVRTHGCHEGQGHLFGAPMTADAVRTQL
                     ETSTTVAQLVA"
     gene            complement(3617..>4186)
                     /locus_tag="VIY07_11805"
     CDS             complement(3617..>4186)
                     /locus_tag="VIY07_11805"
                     /inference="COORDINATES: protein motif:HMM:NF024267.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HEY6382472.1"
                     /translation="WLTITHTVDASLQMAVTTTSAGYAAAISGRNAGRPFIAVGQLAL
                     CTLPMSIALLAYPDWAHKALGFVVLMFIYGMIDITLSIRDIIIQALTMTRKEAALAAR
                     FEQQANRFDIALNNMSHGLCMLDDQNRLQVWNDRFLEMLHLNNAPVRVDMPAAQLIRH
                     SIRAGNHKTRSVKKVFNDLAQGLRKDRFD"
BASE COUNT          858 a         1280 c         1297 g          751 t
ORIGIN      
        1 aaacgacagg cctgcgcctt ccagcatggc cttggtgccg tcccgattcg cgacatggcc
       61 gatttcatgc gcaatcacac cggcaatttg atcggcattg tcagccttgt cgatcagccc
      121 gcgaaagaca tagatgtgtc cgcccggcag cgctatcgca ttggcctcgt cccgccgcgc
      181 aacgcgggtg cgcagtggca tcggcagcat cgccgcggcc tcgagccgac gcatcaattt
      241 atcgagtgcc gcgcgtcccg ccgtttccac agcggctgtg ccgcactcga acggggcacc
      301 gcctttgccc gggtcgagca tgccgcgtac ctggatgtcc accgcatccc ccagcttgcg
      361 ctcgactgat ggtggcagca gcggagccag gcgttcagca atcgccggca ggccaaacca
      421 ggcaaccagc acgagcgacg cagttgccgc gaatgtccag ccgatgacgc gcatccgctg
      481 ccggcgttgc agcaagccgg tgcggccgac atgaatcgcc agcgcatcaa tttccttggc
      541 aaaggctgaa tctcgaattt ccagacgttc caatgtcggg ctgccccgac ggcccaggcg
      601 gagcatgctg tcgggagcgg cgagttcctc gatctcgcta taaggccatt cgccccacag
      661 atgtccgtcg gggccggaaa tcttcagagc cgcgggcgtg agctctacga cggcctcgcg
      721 gcgaacgctc gtgacgccat cgaagtagat tccggtgcca gaagtcattg agtacagtcc
      781 ttcggcccca tcccgaatca atagctgccc acgttcaggg catcggcgag accctcgccg
      841 aaagccgaac tgggccggcc gctggccttg accttttcga gcgccgaaag gcccgacaat
      901 tgcagcgatt ccatgcccag ctgccagagc gagaagagca ccgtggcgcg atagatggtt
      961 gagatgccga gcgcagcgat cacatagccg accagcagga caagggttgt cgcgatctgg
     1021 cccgaggcgt ccgagcccgc gagggcatcc gtcagcaaca gagccgccgt cccggcaatt
     1081 gccatcgcaa cgccgaacag gcccgcatag ccgacgaacc gcgcgtaggc cccatagaca
     1141 tggcgtacga gcaagcgcga gtgcactttc agctcgccaa aacggaggcc tgacgaccac
     1201 cagcgcagaa tcagcgtctg gaaggcggga tagagcaggg cacccagcgt gatgctgatg
     1261 cctcccatca gcatggcgaa gacgacggcg ctgcccaggc ccggattgcc gccttcaatc
     1321 ttgcccatga cgtcgtcgcc gccctgcgcg acggcgtcaa tcagcgcttg ccagtccagg
     1381 ccaacgaaaa ccctgacggc tagcgcgaga ggagcaaaaa acagcagcca tatcggcaac
     1441 ccgcgcagaa gcaacgcgaa gcctgacgac tcgaagcggc cggcaagatc gccgtagaac
     1501 gtatttttca tcttgtagcg ttcgaggctc gccagctgga acggataagc aagcccgaaa
     1561 gtcagtacag tcacggtcca ccaggcgatt gcgcggaatg cgtaggccca ggccgagcct
     1621 ttctgatgga agcgcaggcc gcgataaacc gtgcgcgtga ggcgatagcg ccgggcgcgg
     1681 tagatggcgt attgcccgag tacggcgagc gcggcaaagg cgatcagccc ggataattgc
     1741 ccaagaagtc ccagatcgag tgccgccaaa aagaatgcgg tgtagatcgg aataagcaag
     1801 gcaattgcga tgagaaagcc gagcaaaagc tcgagcgcgg tgccggtata ttcgagcgct
     1861 tcaccagcga tctcggtgtt cgaccagaga aatcggcgga tatcggtcac cagccagaat
     1921 cggtatatgc cgagcgtgac catcaaaagc gcggcgcccc gaatgagcaa ccgccaatag
     1981 gatcggcgct gcccgaggaa tcgcacgccg ccgttcgtgg caatcccgcc tgcatcgaaa
     2041 ctggccatgg tcagcaggaa taatggctcg ccgggatgca ggcaatgttg ttcagggcga
     2101 gcgtcgtcct gccgtggccg ggcgcgccac tgtaatgtcc aggccgcaca gcgccttcat
     2161 aaatgagatc cgcaaaccga aaggtaagcg ggaatcaagc caccagctga gccacggttg
     2221 tcgaggtctc cagctgcgtc cggacggcgt ccgcggtcat tggcgcgccg aacaggtgac
     2281 cctgtccctc atggcagcca tgcgtccgga cctgcttcat ctgctcttct gtctcgatac
     2341 cttccgcgac gacaaccttg tcgaggcgcg ccccgagacc ggcaactgcg ccgatgatcg
     2401 cctgggcatc acgttcttcc ccgagaccgg caataaacga ctggtcgatc ttgatcttct
     2461 ggaagggaaa cttgcgcagg taattaagtg acgaataccc ggtgccgaaa tcgtcaagcg
     2521 aaatgccaac gctgagattc ttgagctgct ccatcgcggc cagcgtcccg tcgttgtctt
     2581 caagcagcag gcgttcggtg acttcgagct ccaggcgttg tgccggaagc ccagacttgg
     2641 cgagaggcga tacgacatgc aaggcaaggc cgcggtcgcg gaattgcacc ggcgagagat
     2701 tgacggcgac cttgacgctt ttcggccatt ttgcggcttc gaagcaggcg tgcatcaatg
     2761 cccattcgcc gagagcaatg atgagcccgg tttcctccgc gatgggaatg aagacggatg
     2821 gaggcaccat tccgcggctg gggtgtttcc agcgcagcaa tgcttcgcac gtcgtcacgc
     2881 ggccagtgcg tagatcaacg agtggctgga aatgcagctg gaattgctcc gaagcgagcg
     2941 cttcgcgcaa gtcgagttcg agggcgcggc gctcctgcgc tgcctcctcc atttcgaggg
     3001 cgaagaaccg gtgatcgccc ccgccgccgt tcttggctgc gtagagcgcc atgtcagcct
     3061 tcttcagaag ctggtcggcg tcgacgccat ccataggagc catggcaatg ccgatcgagg
     3121 ccccaatgtc gatgcggtgg ccatcgatat cgaatggatc cttgagcgtc cgcgccagcc
     3181 gttgggcaag ccatttggcg tcctggtaac gttccgtgcc gacttgcaga acgacaaact
     3241 cgtcgccgcc gaagcgggtg atcatgtctc ccggccgaat gacggtcttg agtcgcgagg
     3301 cgacctcttt gaggagcttg tcgccaattg gatggcctag cgtgtcattg accgacttga
     3361 atcgatcaag gtcgatcagg tgaatcgcga tgtggttccg ccctttgtgc atggctgcga
     3421 gcatgccgtt aatgcgctcg cggaagtggt tgcggttcgc gagacccgtg agctcgtcgt
     3481 acttggcgag gtgggtgatg cgctcctgcg cgcgcttgct ttcggtgacg tcctcgagaa
     3541 tcacaaccga cccgccgccg gccatcatcc ggcgcgacac ggcgatggtg cgatcgccgt
     3601 caggcgaggt ctgaacctag tcgaagcggt ctttccgaag cccctgggcg aggtcgttga
     3661 agaccttctt cacgcttcgc gtcttgtggt tgccggcacg gatgctgtgc cggatcagct
     3721 gcgccgccgg catatcgacg cgaaccggcg cgttattgag atgcagcatt tcgaggaacc
     3781 tgtcgttcca aacctgcagg cggttttggt cgtcgagcat gcagaggccg tgcgacatgt
     3841 tgttgagcgc gatatcgaag cgattggcct gttgctcgaa gcgggcggca agcgccgctt
     3901 ccttgcgcgt catcgtgagc gcctggatga tgatatcgcg aatgctcaac gtgatgtcga
     3961 tcatcccgta aatgaacatc agcacgacga aacccaacgc cttatgggcc caatcgggat
     4021 aagccaacag cgcgatcgac attggcagcg tgcaaagtgc aagttggcca acggcgatga
     4081 agggccggcc ggcattacgc ccggaaattg cggccgcata tccggctgac gtcgtggtga
     4141 ccgccatctg gagcgatgca tccacggtat gtgtgattgt cagcca
//
LOCUS       DATDHO010000615         2978 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_227522, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000615 DATDHO010000000
VERSION     DATDHO010000615.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2978
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227522"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..135
                     /locus_tag="VIY07_11810"
     CDS             4..135
                     /locus_tag="VIY07_11810"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEY6382473.1"
                     /translation="MVDAAKTVKPALENFYASLTSEQKARFNRIGRSLADASGQSTN"
     gene            326..1501
                     /locus_tag="VIY07_11815"
     CDS             326..1501
                     /locus_tag="VIY07_11815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY6382474.1"
                     /translation="MSQTTRHCIAAGVAAIIFAVATANTEAKDKVKVGFIGPLTGGVS
                     VNGIGGRNSAELAVRLRNADPKAKYEYELVVLDDECKPNVAVQVATKMAADKDIIAGA
                     THYCSVAAIATVDTYHKFGFPVIVWGAVLPDITYRNKYEEIHRVNGTMINQNDANAEL
                     ISKLGYKTIAVIHDTTDYGKGHNEYFSKALAKIGKANIVGTFGVTADQQDFTAELTKI
                     KALNPEVIYFGGLTPIGVRIRSQMDKLGIKAVFDGTSGIVSDAFIQGLGPLAEGALAF
                     REGAPVEKLPGGKFFMEKYNAQKYDNPPEAYGPFAFAAMDMILDTIEQVGPNRKKVIA
                     ALANVKDRDSIVGKITFDDHGQNTVPVITKYVVQDGKFVEWDDSEYASGKRKLPGRS"
     gene            1634..2554
                     /locus_tag="VIY07_11820"
     CDS             1634..2554
                     /locus_tag="VIY07_11820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382475.1"
                     /translation="MDLGLFAQYVMNGLMLGMMYALVAVGFTLFFGVLDVIKFSHGDV
                     LTVGAFTALAAFAGLTSLGVRSQWLDLVVMLVLATVMMALLGMLIARYLVMPLRSAPA
                     LNTLLITLMLGTVLREGVRLFYPQGANPKPFPALLPRGSIDLGAFNLRLDNVLMLASG
                     VFVIVGIQYLLNRTKLGLAIRAVAQDEETARTMGINFTAIVLITFAIGSALAAFAGMM
                     NGLYYNEINFGIGLYLGVVGFSAAIIGGLGSIYGAILGGFLFAGLQTVGTVLLPFASA
                     YKDVFAFAVVIAIMAWRPTGLIQEKISERV"
     gene            2541..>2978
                     /locus_tag="VIY07_11825"
     CDS             2541..>2978
                     /locus_tag="VIY07_11825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382476.1"
                     /translation="MNASRTIAKKAPVSIWPGVIALAFATVYLIAMLAVEKQALIIAL
                     LVAGIAVIAAAAWVGLLDGVSACFAEHEDALGACAIIAALIVAAYFHDDHFVLLLIIT
                     VLLYSVATLGLNVQFGYAGVLNFAGASFFGIGAYTSAVFNTYTS"
BASE COUNT          595 a          896 c          844 g          643 t
ORIGIN      
        1 gcgatggtgg acgcggccaa gaccgtcaag cccgctttgg agaacttcta cgcctcgctc
       61 acgagcgagc aaaaggcacg gttcaaccgc attggccgct cactggcgga cgcatcggga
      121 caatcgacca actaacggat cgcagggtcc ccaaactgaa taagggcggc tttccagccg
      181 cccttatttt cttgcggagc cctaaaagat gcccgacgcg acagaacaag cttctgccag
      241 cgacataata cgagcttgcc gtcaggctcc tcccgcgcaa ctatgcccaa tactgcgaag
      301 ggcaagaagt gatcatggag ggcgtatgag tcaaacaacg aggcattgta tcgcggccgg
      361 cgtcgcggca atcatctttg ccgtcgccac agccaacacc gaggcgaagg acaaagtcaa
      421 agtcggcttc attggtccgc ttaccggcgg cgtctccgtg aacgggattg gcggccggaa
      481 ctcggcagaa ctcgccgttc ggctccgcaa cgccgatcca aaagcaaaat acgaatacga
      541 gctcgttgtg ctcgacgacg aatgcaagcc aaatgtggca gtgcaggtcg ccaccaagat
      601 ggcggctgac aaggatatca ttgcgggtgc cacgcactat tgctcggtcg cggcaatcgc
      661 cactgtcgac acctatcaca agttcggctt tccagtgatc gtttggggcg cggtgctgcc
      721 cgacattacg tatcgcaaca agtatgaaga gatacaccgc gtcaatggga cgatgatcaa
      781 ccagaacgac gccaacgctg aactgatatc caagctcggc tacaagacta tagcggtgat
      841 tcacgacacc accgattacg gcaagggtca caatgagtat ttcagcaagg cgctggccaa
      901 gatcggcaaa gccaacattg tcggcacctt cggtgtcacg gccgaccagc aggacttcac
      961 tgccgaactc acaaagatca aagcgctcaa tcctgaggtg atctacttcg gcggattgac
     1021 cccgatcggc gtccgcattc gttctcagat ggacaagctt ggcatcaaag ccgttttcga
     1081 cggcacctcg ggcattgtct cggacgcctt tatccagggg ctcgggcctt tggctgaagg
     1141 cgcgctcgcc ttccgcgaag gtgcgcctgt cgagaagctg ccgggcggca agttcttcat
     1201 ggaaaaatat aacgcgcaga aatacgacaa cccgccggaa gcgtatggcc cattcgcctt
     1261 tgccgcgatg gacatgattc tggacaccat cgagcaggtt gggcctaacc gcaaaaaggt
     1321 gatcgcggca ttggcgaacg tgaaggatcg cgattcgatc gtgggcaaga tcacgttcga
     1381 cgatcacggc caaaacaccg tgccggtcat aaccaagtac gtggtgcagg acggcaaatt
     1441 cgtggaatgg gatgacagcg agtacgccag cggcaagcgc aagctgcccg ggcggtctta
     1501 gtcgtcacac atcaccgttc gtccccgcgt aagcggggac ccaggcgcta tatgggtcga
     1561 cctcttattt tgccctggat tcccgcttac gcgggaatga acggaatttc attccgattt
     1621 gcgtatacct gacatggacc tcggcctctt cgctcaatat gtcatgaacg ggctgatgct
     1681 cggcatgatg tatgcgctgg tggcggtcgg cttcacgctg ttcttcggcg tgctggatgt
     1741 catcaagttc tcgcatggcg acgtcctcac tgtcggcgcg ttcaccgcgc ttgccgcttt
     1801 cgctggcctg acttcgcttg gcgtcagatc tcagtggctc gaccttgtcg tcatgctcgt
     1861 actggcaacg gtcatgatgg ccctgctcgg gatgctgatc gcccgctatc tggtcatgcc
     1921 gttgcgatcg gcgccggcgc tcaacaccct cttgatcacg ctgatgctcg gcaccgtcct
     1981 gcgtgaaggc gtgcggctgt tctatccgca gggcgccaat ccgaaaccgt ttccggcgct
     2041 gctgccgcgc ggttcgatcg atctcggcgc attcaatttg cggctcgaca atgtgctcat
     2101 gctggcctcc ggcgttttcg tgatcgtcgg aatccagtat ctgctcaatc gtacgaagct
     2161 cggcctcgcc atccgcgcgg tcgcgcagga cgaagaaacc gcccgcacca tgggcatcaa
     2221 tttcactgcc atcgtcctga tcacttttgc catcggctcc gccctcgccg ctttcgccgg
     2281 tatgatgaac ggcctctact acaatgaaat caattttggc atcggcctct atcttggcgt
     2341 ggtcggcttt tccgccgcca ttatcggcgg cctcggcagc atctacggcg ccattctcgg
     2401 agggttcctg ttcgccggcc tgcagaccgt cggcaccgtg ctgttgccct tcgcaagcgc
     2461 ttacaaggac gtgttcgctt ttgcggtggt gattgccatc atggcctggc gtccaaccgg
     2521 gctgatccag gaaaagatca gtgaacgcgt ctaggacgat agcgaagaaa gctcccgtct
     2581 caatttggcc gggggtgatc gcgctggcat ttgccacggt ctatctgatc gccatgttgg
     2641 ccgtcgaaaa gcaggcgttg atcatcgcat tactggtcgc cggcattgct gttatcgccg
     2701 cggcggcgtg ggtcggcctg ctcgacggcg tcagcgcctg cttcgccgaa cacgaggacg
     2761 cgcttggcgc ctgcgcgatc atcgccgcgc tcatcgttgc agcgtatttc cacgacgacc
     2821 atttcgtatt gctgctgatc atcacggtcc tgctctattc ggtcgctaca cttggattga
     2881 acgtgcagtt tggatacgcc ggcgtcctca attttgcggg tgcgtccttt ttcggtatcg
     2941 gcgcgtacac ctccgccgtc ttcaacacgt acacctcg
//
LOCUS       DATDHO010000616         3030 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_471781, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000616 DATDHO010000000
VERSION     DATDHO010000616.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471781"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..148)
                     /locus_tag="VIY07_11830"
     CDS             complement(<1..148)
                     /locus_tag="VIY07_11830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018859618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY6382477.1"
                     /translation="MSSSQQLPLSATHLVRDNCLCLHVQRAARGLARSFDDVFRPLDL
                     THGQF"
     gene            211..618
                     /locus_tag="VIY07_11835"
     CDS             211..618
                     /locus_tag="VIY07_11835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6382478.1"
                     /translation="MQVQSYLFFDGRCEEAIEFYKKTLGAEVDMLMRWKDSPDKSMCS
                     PGNEDKVMHASLKIGDTRVMASDGRNTGNPKFDGFALSVDAKNDADADRLFDGLSNGG
                     KVVMPLGETFFSPRFGMTQDKFGVNWMVIVEPK"
     gene            726..1247
                     /locus_tag="VIY07_11840"
     CDS             726..1247
                     /locus_tag="VIY07_11840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEY6382479.1"
                     /translation="MATATKSAEFVISRVLDAPRNLVWKCFTDPEHMRQWWGPKGFTV
                     VASKMDLRVGGTYHYGLKAPNGAPMWGKFVFREIVPPERLDFISSFSDEEGGTTRHPG
                     HTSWPLQMHSTFTFEELPGGKTKFTVSWTAHNATPEEQKVFDTSHQSMNQGWSGTLEK
                     LEAYLAKAKVAAR"
     gene            1258..1764
                     /locus_tag="VIY07_11845"
     CDS             1258..1764
                     /locus_tag="VIY07_11845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018427809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6382480.1"
                     /translation="MALSKHKITPCLWFDTEAEEAAKFYVSVFKNSKLGKISRYGKAG
                     QEIHGKKPGSVMVAEFEIDGQPFVALNGGPQFKFSEAVSFQVHCDTQEEIDYFWNALT
                     KEGREQPCGWLKDKFGVSWQIVPTVLGKMMTDSDTEKTQRVTNAFLKMKKFDLAKLKQ
                     AYEGQAAA"
     gene            1789..2280
                     /locus_tag="VIY07_11850"
     CDS             1789..2280
                     /locus_tag="VIY07_11850"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEY6382481.1"
                     /translation="MSKPAEYGKATVTILRVFDAPRALVWKAWTDPKMMAEWFGPRGF
                     TNPVCELDVRVGGSLRIVMRGPDGQDYPMKGEFREVVAPERLVFTNIATDNNGNHLLE
                     GETTVTFAEKDGQTTLTVTSYAVGLVPIAPQMLAGMEAGWTQSIDKLETLVGGSGQVR
                     TTT"
     gene            2277..2969
                     /locus_tag="VIY07_11855"
     CDS             2277..2969
                     /locus_tag="VIY07_11855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY6382482.1"
                     /translation="MTLKLYFHPLASYCHKVLIALYEHDIAFEAILVDLGDEKSSAEF
                     RALWPLAKFPVLRDEARNCTVAESTVIIEYLDAYRPHAAPFVSADGDLAWQTRMWDRF
                     YDLYVQEPMQKIVGDRLRPAGRTDPFGVEQAIAQLGRSYAMIEARMKSDSWAVGDTFT
                     LADCAAAPALFYANTVVPLGSEHRSTRAYLDRLMARPSFARVLEEAQPYFGMFPMERK
                     LQLSRPVLAVSQ"
BASE COUNT          679 a          863 c          898 g          590 t
ORIGIN      
        1 aaaattggcc gtgggtgaga tcgagcggac ggaacacgtc gtcaaaactt cgggccagcc
       61 ctcgcgcggc gcgctgcaca tgcagacaca ggcagttgtc tcgcaccaga tgcgtggcgg
      121 acagtggtaa ttgctggctg cttgacatgg ctgataatag gttgatatca acctatttgt
      181 caataacacg aacctggacg gaggagagtt atgcaagtgc aatcctacct gttcttcgat
      241 ggccgctgcg aagaggcaat tgaattctac aaaaagacgc ttggcgccga ggtcgatatg
      301 ctcatgcgct ggaaagacag tcccgacaaa tcaatgtgct ctccgggcaa cgaggacaag
      361 gtgatgcacg cctcgctcaa gatcggtgac acgcgggtca tggcttctga tgggcgcaac
      421 accggcaacc ccaagttcga cggcttcgcg ctttccgtgg atgcgaaaaa tgatgcggac
      481 gcggatcgcc ttttcgatgg gctgtcgaat ggcggaaagg ttgtcatgcc gctgggcgag
      541 acgttctttt cgccgcggtt cggaatgacg caggacaaat ttggcgtcaa ctggatggtc
      601 attgtcgagc caaagtgaat gccagggcgc gccgggcggg ctgtgatgca agccgcgcgc
      661 tctcttcctc tcctgaccgt cctttcgcgc aacaggaatc tccaacgcca atcgaggagt
      721 gcccaatggc gaccgccacg aaaagcgctg aattcgtcat ctcacgcgtg ctcgacgccc
      781 cgcgcaatct ggtatggaaa tgcttcaccg atccggagca catgaggcaa tggtgggggc
      841 cgaaaggctt cactgtcgtt gcttcgaaga tggatctccg cgtgggaggc acctaccact
      901 acggcctcaa ggcgccgaac ggggcgccga tgtggggcaa gttcgtcttt cgcgaaatcg
      961 ttccacccga acgcctggac ttcatcagct cattttccga tgaggagggc gggaccactc
     1021 gccaccccgg tcacacatcc tggccgctcc agatgcattc gacgttcact tttgaagaac
     1081 tgcccggcgg caaaaccaaa ttcaccgtca gctggaccgc gcacaatgcg acgcctgaag
     1141 agcaaaaggt gttcgatact tcgcatcaaa gcatgaacca gggctggagc ggtaccctgg
     1201 agaagctcga ggcctatctc gcaaaagcca aagtagccgc gcgttaagga ggacatcatg
     1261 gcgctcagca agcacaagat cacgccttgc ctgtggttcg atacagaagc cgaggaagcg
     1321 gcgaagttct acgtctccgt gttcaaaaat tcgaaactcg ggaagatcag ccgatacgga
     1381 aaggccggcc aggagatcca cggcaagaag ccgggctctg tcatggtggc agagttcgaa
     1441 atcgacgggc agccattcgt ggcgctcaat ggcgggccgc agttcaagtt cagcgaggcc
     1501 gtgtcattcc aggttcattg tgacactcag gaagagatcg actacttctg gaatgctctg
     1561 accaaggaag gccgcgaaca gccctgcggc tggctgaaag ataaattcgg cgtttcctgg
     1621 cagatcgtcc ccaccgtgct cgggaaaatg atgacggatt cggacacgga aaagacccaa
     1681 cgcgtcacca acgcgttcct gaagatgaag aagttcgatc tggcaaaact gaaacaggcc
     1741 tacgagggcc aggccgccgc ctaacgtacc gcctttgacg aaaaaaacat gagcaagcct
     1801 gccgaatacg gaaaggcgac tgtcaccatc ttgcgcgtgt tcgatgcgcc gcgcgcgctg
     1861 gtatggaaag cgtggaccga tccaaaaatg atggcggaat ggttcggtcc gcgcggtttt
     1921 accaatccgg tctgcgagct tgacgtgaga gtcggaggta gcttgcgcat tgtgatgcgc
     1981 gggcccgatg gccaggacta tccgatgaaa ggtgagtttc gggaggtcgt tgcgcccgag
     2041 cgattggtct tcaccaacat cgcgactgac aataacggca atcatctgct cgaaggcgaa
     2101 accactgtca ccttcgccga aaaagacggc cagaccacgc tcacggtgac ctcgtacgcg
     2161 gttggccttg ttccgatcgc accacaaatg ctcgccggca tggaagcggg ttggacccag
     2221 agcatcgaca agctggaaac tctggtcggc ggttcaggac aagtaaggac cacgacatga
     2281 cgctcaagct ctatttccat ccgctggcgt cctactgcca caaggtgctc atcgcccttt
     2341 acgaacacga tattgcgttc gaggcgatcc ttgtcgatct cggggacgag aaatcgagcg
     2401 cggagttccg ggcgctatgg ccgttggcaa aattcccggt actgcgcgac gaggcgcgca
     2461 actgcacggt cgccgaatcg acggtcatta tcgagtatct cgacgcttac cgtccccacg
     2521 cggcgccctt tgtatctgct gacggcgatc tcgcctggca aacacggatg tgggaccgct
     2581 tctacgactt gtacgtccag gaacccatgc agaagatcgt cggcgatcgg ctgcgccccg
     2641 cgggccgtac tgatcccttc ggcgtggagc aggctatagc tcaactcggc cgttcctacg
     2701 caatgatcga agcacggatg aaatcggaca gctgggcagt aggcgacaca tttaccttgg
     2761 ctgattgcgc tgcagctccg gcacttttct atgcaaacac cgttgtgccg ctcggctccg
     2821 agcacaggag cacgcgcgcc tatctcgacc gcctgatggc gcggccgtcc ttcgcgcggg
     2881 tgcttgaaga ggcgcaacct tactttggca tgttcccgat ggagcgaaag ctacagcttt
     2941 ccaggcctgt gctggcggtc agccagtagg cgcactctcc tgggccgagg cgcatgcctg
     3001 gctcgcttct ttctcaggtc aggcgatcag
//
LOCUS       DATDHO010000617         1980 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_376189, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000617 DATDHO010000000
VERSION     DATDHO010000617.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1980)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376189"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VIY07_11860"
     CDS             complement(<1..270)
                     /locus_tag="VIY07_11860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HEY6382483.1"
                     /translation="MPKNRIAYVVLWMVGALLSFSVMAVSIRELASGGLNIFEILAIR
                     SGVALLVLLILLGIRSDLRAYAKPRRMRLHFFRNTVHYASQFAWAL"
     gene            complement(301..936)
                     /gene="maiA"
                     /locus_tag="VIY07_11865"
     CDS             complement(301..936)
                     /gene="maiA"
                     /locus_tag="VIY07_11865"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003608725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HEY6382484.1"
                     /translation="MKLFSYFRSSAAYRVRIALNLKGLPYDMVPIHLTKDGGRQHTSE
                     FRVINPQSRVPALELSTGEILTQSLAIIEYLNEIHPEPPLLPSDPLARAKSRAIAQMI
                     ACDIHPLNNLVALQYLKRKLEHEQPDIDAWYHHWIIEGFTALEKLLEPGPYACGSQVT
                     VADICLVPQVTNARRFRVPLDKFSKIVAVDAACMKLPAFDKARPENQPDAE"
     gene            complement(965..1486)
                     /locus_tag="VIY07_11870"
     CDS             complement(965..1486)
                     /locus_tag="VIY07_11870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY6382485.1"
                     /translation="MTQEMAQRVPDAAERVALKLEEFLPYRLNVCSSLVSHALSRIYA
                     DRYKIGVPEWRVLVTLGQFGAMTAKAIGDHSHMHKTKVSRAVALLERRKLVTRRANRA
                     DLREAFLSLTAAGRDVYNELAPIALDFARELLKSVDAADRAALDRALMKLTERSAQLA
                     PSTGRIANGRRPG"
     gene            1850..>1980
                     /locus_tag="VIY07_11875"
     CDS             1850..>1980
                     /locus_tag="VIY07_11875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6382486.1"
                     /translation="MVTGFASTEDLGEKQVSFDQVGSGIYAYTAEGDPNSGIIVGDDA
                     "
BASE COUNT          455 a          518 c          594 g          413 t
ORIGIN      
        1 tagcgcccac gcgaactgcg atgcgtagtg cacggtgttg cgaaaaaaat gtagtctcat
       61 tcgccggggt ttcgcataag cgcgcaagtc cgacctgatc ccgagcaaaa tgaggagcac
      121 gagaagcgca acgccgctgc ggatcgcgag aatttcgaaa atgttcaacc caccgctggc
      181 caactcgcga atcgataccg ccatcaccga aaaggagagc aatgcgccga ccatccagag
      241 gacgacgtat gcgatcctgt ttttgggcac gtgagttcgg tgtcggtgtg agccgtaggg
      301 tcactcagcg tcaggctggt tttccggccg cgctttgtca aaggctggga gcttcatgca
      361 agcagcatcc actgcaacga tttttgagaa cttatcgagt ggtaccctga agcgcctggc
      421 atttgtcact tgggggacca ggcaaatatc ggcaacggtt acctgagagc cgcaggcata
      481 aggtcccggc tccagcaact tctccaatgc ggtaaagccc tcaatgatcc agtgatggta
      541 ccaggcgtcg atgtcaggtt gttcatgctc aagcttccgc ttgagatatt gaagcgcaac
      601 gagattgttg agtgggtgaa tatcgcaggc gatcatctgt gcaatcgcgc gcgatttggc
      661 gcgtgcgagt ggatcggacg gcaacagagg cggctcaggg tgaatttcgt tcagatattc
      721 gatgattgcg agggattgcg tcagaatttc cccggttgac aactcgagtg ccggcacgcg
      781 tgactgagga ttgataacgc gaaattcaga cgtgtgctga cggccgccat cctttgtcag
      841 gtggattggc accatgtcgt aaggaagccc tttgaggttc agtgctatac ggacgcggta
      901 ggcagcggaa gaacggaaat acgaaaagag tttcacggat tgaccccggc tttcttgttg
      961 caatctaacc gggacgacgc ccgttggcga tacggcccgt tgatggcgca agctgagccg
     1021 atcgttcggt gagcttcatg agcgcgcggt caagcgctgc cctatcagcg gcatcgaccg
     1081 atttcagaag ctcacgcgca aagtcgagcg cgattggagc cagctcattg tagacatccc
     1141 gaccggcagc cgtgagcgag aggaacgctt cgcgcaaatc ggcccggttg gcgcggcggg
     1201 tgacaagctt gcggcgctcc agcaaggcaa ccgcgcgtga aaccttggtc ttgtgcatgt
     1261 ggctgtgatc gccgatggcc ttggcggtca tcgccccaaa ttgcccgagt gtgaccagca
     1321 cgcgccattc aggcacaccg atcttgtagc gatcggcata tattcgcgag agcgcatgcg
     1381 acacaagact ggaacagaca ttcagacgat agggaagaaa ctcttccagc ttgagcgcca
     1441 cacgttcggc cgcgtccggc actctctggg ccatttcctg ggtcattgcg tgctgctgta
     1501 aaacttgcgt gccgttcgac gttcacgcgc gcaccgaaaa ttttggccga aactgaaaca
     1561 gcttgcaacg attctaaact agaaaatgga cgacttttgc cgcgtggcag gccaatatcg
     1621 cagcgtttcg aggcgccaag acaacgggga tgtctaacgg tttgtcaaag cgagcggtaa
     1681 cgaaagcagg tcccgcaagc agacaaagaa cgaccttcct gaggtcattg ttttccgcaa
     1741 acagaacatg gttgcgtttg caaccaaagg ggcgcgtgga ccccgctggg tgatcaattt
     1801 tgcggctcgc aacgcgaacg gcctgatgtt tgatcgctga aaggttttgg tggtgacggg
     1861 attcgcttcg accgaggatc tcggcgaaaa gcaggtttca ttcgatcaag tcggatcggg
     1921 aatctacgct tacacggcgg aaggcgatcc aaactctggc atcattgtcg gcgacgacgc
//
LOCUS       DATDHO010000618         7811 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_75389, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000618 DATDHO010000000
VERSION     DATDHO010000618.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7811
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75389"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..709
                     /locus_tag="VIY07_11880"
     CDS             <1..709
                     /locus_tag="VIY07_11880"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEY6382487.1"
                     /translation="IASQQRPLAISELAALLQVPKPTMHRIVRQLDTEGLLQREPNRR
                     VYGPGPRLLNFALGAVQSSMRSAPRHAVLEALSAKVGETCNFGMMSGNAILYLDRVEA
                     SWPFGLKFESGSRVPLHCTAVGKLLLSAQPRRRRDELIRATPLPRYTENTITDPDALH
                     RQLDEIRKRGYSIDNQEFLAGVVCLAVPVRDSKGMICAGLAISAPHARMSVAESINHL
                     PVLLAAADQLATHLGQD"
     gene            732..1199
                     /gene="accB"
                     /locus_tag="VIY07_11885"
     CDS             732..1199
                     /gene="accB"
                     /locus_tag="VIY07_11885"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEY6382488.1"
                     /translation="MGLSYDEVSQIIKLIDGSSCDEFILETEDIKLVVRRRGADGAGA
                     IDAAQDSGTIFAGSPSRQQPAHSRHRPASVSSPHVVSAPMVGTFYRSPSPGAPPFVEL
                     GSKVKKGDPICIIEVMKLFTTIHAEWSGTVKEIGAENAELVEYGQMLFVIAPE"
     gene            1376..2449
                     /locus_tag="VIY07_11890"
     CDS             1376..2449
                     /locus_tag="VIY07_11890"
                     /inference="COORDINATES: protein motif:HMM:NF028178.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY6382489.1"
                     /translation="MMARTLLRCLVAFVAIGTAALTNAPARAQNPIIPMLICPFGCGN
                     TEGYAVLGNLMARGNEPVTLAPQETPGYMYNVRAMAEERRWKNTVFGTEDTIVLLAPH
                     GGKPEIKEFLPEPITVPFKLLFGEAFWGQGKFFVSQDPNIKTPADLKGKRIALGLRTQ
                     SDFGFFARLILEYGYDVTPKNADIRHVTPDTAVQQVIDGAADAAVVAFGTNPTYTQWN
                     IGGPLRKLEAAGKPINYIGVDKAAIDKVNEKWGTGFLIHEIPKGTLPKQEKPFVSALN
                     RGYIAANPNLSDEVAYGLVKAVAKYGPEMGKLNALWTLWSPEMMLHGLAEDNVHPGAK
                     KAYVELGWWDQHKKYPPVVFQKN"
     gene            2520..4511
                     /locus_tag="VIY07_11895"
     CDS             2520..4511
                     /locus_tag="VIY07_11895"
                     /inference="COORDINATES: protein motif:HMM:TIGR02123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter fused permease subunit"
                     /protein_id="HEY6382490.1"
                     /translation="MNRSLMLTRSACNSLFWLFGIGLSVYLAAACFGYVSNSSEHYSN
                     FIFGVVGMSGFHAINEIIDRHFTPSGRHDPWFWVYFSLAVISTLAALASAGYVRLYAV
                     HLETTQPFFGRFDFNVGLVFLCSILALNWFHWGGLLTIIIAGSVLYFFYGYLIPYPLL
                     ATPEYDPEFVMNYMGLGTNEGLFWFAREAADSVWFLVLFAGALMSIGSLRMILEVGKA
                     AGNRISGGAAFPALIGSGIVASIMGTAVSNVVLTGRLTIPMMKAKGYSPSMAGAIEAT
                     AGTAGQIMPPVLGLAAFIIAALLNIPYVQVALAAVIPGLLYMTGVTAGVLVYARRHRL
                     PRLSEKVDVGLILRLLPGFAISFAVVMYMLVSYYSPSLAGLVGIVVAMFIGLFQGPDR
                     VKWKNVVFAFKDTLAMAAILSLLLIAIGPLGQAFLTTNLANRLGTIAVLLLPDSQILM
                     LIGAAALALILGLGLPTPVAYIVTALALVPFLQQLGVEPLTAHFFVFYFAVYSALTPP
                     VAVASLAAAKIARADISQTTWDSQKLMLTTFVIPFAFVYYPSLISFPNLSWGVLIPIV
                     TCLLLQWTVSIACYGHFLRDQSHSERWGWGIVSFAGYAGLCTHGSTWNLIFVALMLMM
                     GGYVYFTRDKVIEAAERERQRVKRQAAPDPDLPLEGRYE"
     gene            4504..5454
                     /locus_tag="VIY07_11900"
     CDS             4504..5454
                     /locus_tag="VIY07_11900"
                     /inference="COORDINATES: protein motif:HMM:NF017652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HEY6382491.1"
                     /translation="MSNGKIGRHMKPNLTDPGKVIITIATTGGLHGRESNPALPEQPK
                     DIIRNFHDCYNAGATVAHMHVRDKRGVTTADLDVYGEVIEGVMSQCPGMITQVGNGIG
                     LRYENPKAEGEPFSLEERMNLLNIRPQPDQLTLNLGTFHFEHKNTEFLFPNSKKWNAE
                     FVAGCKKRSIRNEFEVYDLSHIQNAIDLMERGALEPPLHFSFVLGIKGGIPATPANLL
                     AMLDAIPDGSSWQVVSIGKYQLPLSTMALALGGNIRVGMEDNVYFSHGLLAVSNAQLV
                     ERAARIVRELGREIATPEEARELMHLGPTPQRPPSAARAS"
     gene            5524..6282
                     /locus_tag="VIY07_11905"
     CDS             5524..6282
                     /locus_tag="VIY07_11905"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6382492.1"
                     /translation="MDLNLKDRVAIVTGGAAGIGEAIARSLSAEGCSICILDRNADAA
                     NKIASAIAQSGTPARAAAADVADADAVTHEFGQFAAAFGRIDILVNAAGLLSTGPAAD
                     LPAPEWQKLSDVNLSGVLYCTQAAIPVMRRQRYGRIINIASVAAMRGGGTVGNALYGA
                     TKAGVVALTMGFARELGPHGITVNAVAPAIADTAMTRTVLTDEVRTKVLERIPLRRLT
                     TPVDVADLAVFLASARASFISGAVIPVDGGILTT"
     gene            6453..7640
                     /locus_tag="VIY07_11910"
     CDS             6453..7640
                     /locus_tag="VIY07_11910"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6382493.1"
                     /translation="MAKLENVVGIVTKEIEQAKKESASRDHEERLAKLERELRASEER
                     WQAIVANPFMGITVLDRNQYFVAANSTYQAMVGYTEDELRKLTPLDITPPIDREINRA
                     LFKELQQDVRQHYELTKRLQRKDGELIWIQLYVFGIPDRGSVGMTVDITEKMRAQHAL
                     QVAHEELARSAHVSRMGAITASIAHEINQPLGAIVANAGAGLRWLARTPPDLAEARES
                     IEQIVREGQRAADVVQSVRSMFKSRDLEHVPTNLNRLIDQVLALVQGTLERKGVVVRT
                     DLDETPASVTGNPVQIQQVLFNLVSNAIEAMDSVAERVISIKTEIEESGDVQVTVEDS
                     GSGIDPKNMDRIFDSFFTTKLNGMGMGLSICRSIIESHGGRLWAASGSSRGAIFRFTL
                     PAE"
BASE COUNT         1599 a         2314 c         2287 g         1611 t
ORIGIN      
        1 catcgcctcg caacagcggc cgcttgcgat ctcggaactg gcggcgctcc tgcaggtgcc
       61 gaagccgacc atgcaccgca tcgtgcggca gctcgatacg gaaggcctgc tgcaacgcga
      121 gccgaaccgc cgcgtctatg gcccgggtcc ccgtctgctc aattttgcgc ttggcgccgt
      181 gcaatcctcg atgcggtcgg ctccacgcca cgccgtgctg gaagcgctgt cggcaaaggt
      241 cggcgagacc tgcaacttcg gaatgatgtc gggcaatgcc attctctatc tcgaccgcgt
      301 cgaagcttcc tggcctttcg ggctgaaatt cgagtcgggc tcgcgcgtgc cgctgcactg
      361 cacggcggtc ggcaaacttt tactcagtgc gcagccgcga cgccgccgcg acgaattgat
      421 acgtgcaaca ccgctgccgc gctacactga gaacacaatc accgatccgg acgcactgca
      481 ccgccaactc gatgaaattc gtaagcgcgg ttactccatc gacaaccagg aatttctcgc
      541 aggcgtggtc tgccttgcgg tgccggtacg cgacagcaag ggcatgatct gcgccggcct
      601 cgcgatttcc gctcctcatg cgcgcatgtc ggtggccgag tccatcaatc accttcccgt
      661 cctgttggcg gcggccgacc aactcgccac tcatctggga caggactagt taccctgcgc
      721 ggggcaaaca aatgggactg agctatgatg aggtcagcca gattatcaaa ctcatcgatg
      781 gcagttcctg cgatgagttc attctcgaaa ccgaggacat caagctcgtc gttcgccgcc
      841 gcggcgccga cggagccggt gcgattgacg ccgcccagga cagcggcacg attttcgcgg
      901 gatcgccctc gcggcaacag ccggcacact cgcgacatcg gcctgcatcc gtttcatcgc
      961 cgcatgttgt ttcggccccg atggtcggca ccttttaccg ttcgccgtct cccggggccc
     1021 cacccttcgt cgagctcggc agcaaagtaa aaaagggaga tccaatctgc atcatcgagg
     1081 tgatgaaatt attcaccacc attcacgcgg aatggagcgg cacggtgaag gagatcggcg
     1141 ccgaaaacgc ggagctcgtg gaatatggcc aaatgctctt cgttatcgct ccggagtgaa
     1201 tgcgaaacgt gagaccagga agtgaaattg agggagaaac tcggccttaa acagtgaacg
     1261 atcaagagac cggcacaaag ccgcatgggc cgtcggccga ccggtcaatg atttcgacca
     1321 tcgaccgcag cgaagaccgc gaagagcggc gcgctgccaa acagggagga cgcttatgat
     1381 ggctcggact ttgcttcgct gcctggtcgc cttcgtggcg atcggaacgg cagctctcac
     1441 aaatgctcct gcgcgggcgc aaaatcccat cattccgatg ctgatctgcc cgttcggctg
     1501 tggcaatacc gaaggctacg ccgtgctcgg taacctcatg gcgcgcggca acgaaccagt
     1561 aactctcgcg ccgcaagaaa cgcccggtta catgtacaat gtccgtgcga tggccgaaga
     1621 gcgccggtgg aagaacactg tattcggcac cgaagacaca atcgtcttgc tcgcgccgca
     1681 tggcggcaag ccagagatca aggaattcct gccggagccg atcaccgttc cgttcaagct
     1741 tctgttcggc gaggcattct ggggccaagg caagttcttc gtcagccagg atccgaatat
     1801 caagacgccg gcggatctga agggaaagcg cattgcgctt ggcctgcgca cgcagagcga
     1861 cttcggtttc ttcgcgcgtc tgatcctcga atacggctac gacgtgacgc cgaagaacgc
     1921 cgacatccgc cacgtgacgc ctgacacagc agtgcagcag gtcatcgacg gcgctgccga
     1981 tgcggcggtc gtcgcattcg gcaccaaccc aacctacacc cagtggaata tcggcggccc
     2041 gctgcgcaag ctcgaagcgg ccggcaagcc gatcaactac atcggtgtgg acaaggccgc
     2101 catcgacaag gtcaacgaaa agtggggcac tggattcctg atccatgaga ttccaaaagg
     2161 gacactgccg aagcaggaaa aaccgttcgt gtccgctctg aaccgcgggt acatcgcagc
     2221 aaatccgaac ctctcggacg aggtggcgta tgggcttgtg aaagccgtcg ccaaatacgg
     2281 acccgagatg ggcaagctca acgcgctgtg gaccctgtgg tcgccggaaa tgatgcttca
     2341 tggtctggcc gaggacaacg tgcatccggg cgccaagaag gcgtacgtcg aactcggctg
     2401 gtgggaccag cacaagaagt atcctccggt cgtctttcag aagaactagc cctctggcac
     2461 ggccggtgtg aatgagcacc ggccgtactc catagcactc ggctttcggg aggagcgctg
     2521 tgaatcgctc gctgatgctc acacgcagtg cctgcaacag cctgttctgg ttgttcggga
     2581 ttggcctgag cgtgtatctc gccgcggcct gtttcggtta cgtctccaac tcctccgagc
     2641 attactcgaa tttcattttt ggcgttgtag gcatgtccgg attccacgcg atcaatgaga
     2701 tcatcgaccg ccacttcact ccctcgggac gccacgaccc ttggttctgg gtttacttct
     2761 cgctcgccgt gatcagcacg ttggcggcgc ttgcctccgc cggatacgtc cgtctttatg
     2821 cggttcacct tgaaacgaca cagccttttt tcggacggtt cgacttcaat gtcgggcttg
     2881 tctttctttg ctcgattctc gcgctgaact ggtttcactg gggcggcctg ctcaccatca
     2941 tcatcgcggg gtcggttctg tacttcttct acggatacct catcccctat cctttgctcg
     3001 cgacaccgga atacgacccc gagttcgtca tgaactatat gggccttggc acgaatgaag
     3061 gcctattctg gttcgcccgc gaggcagccg acagcgtttg gttccttgtc ttgttcgccg
     3121 gcgcgctgat gtcgatcggc agcctgcgca tgatactcga ggtcggcaag gccgccggga
     3181 atcgcatctc aggcggcgca gcgtttcctg cactgattgg cagcggcatc gtcgcctcga
     3241 tcatgggcac cgcggtctcg aacgtagtgc tgacgggccg gctgacaatt ccgatgatga
     3301 aggcgaaggg ctatagccct tcaatggcgg gtgcgattga ggcgaccgcc ggcacggcag
     3361 gacagatcat gccgccagtg ctcggactgg cagctttcat catcgctgcg ctcctcaaca
     3421 tcccctacgt gcaggtggca cttgcggcgg tcattcccgg tttgttgtat atgaccgggg
     3481 tcacggcggg tgtcctcgtc tatgcgcgcc gccaccggct gccgcggctc agcgaaaaag
     3541 tcgatgtcgg gctcattcta agactgctgc ctggcttcgc gatctcgttc gcggtcgtga
     3601 tgtacatgct cgtctcctac tactcgccat cactggcggg gctggtcggg atcgtcgtgg
     3661 ccatgttcat cggcctgttt caaggccccg atcgcgtgaa atggaaaaac gtcgtcttcg
     3721 cgttcaagga cacgctagcg atggcggcga tcctctccct gctattgatc gccattggcc
     3781 ctctcggcca ggctttcttg accacgaacc tggctaatcg ccttggcacg atcgccgtgc
     3841 tcttgctacc cgactcacag attctgatgc tgatcggcgc ggcggcactg gccctgatac
     3901 tgggtctggg cctgccgacg cctgtcgcgt acatcgtcac cgcgctggct ctggtaccgt
     3961 ttctgcagca gctcggcgtc gaaccgctga cagcgcactt tttcgtcttc tacttcgcgg
     4021 tctactcggc gctcacgccg ccggtcgcgg tcgcttcgct cgccgcagcg aagatcgcac
     4081 gcgcggacat cagccagacc acttgggatt cgcagaagct catgctcacc acgttcgtga
     4141 tcccgttcgc gtttgtctac tacccgtcgc taataagctt ccccaacctg tcctggggtg
     4201 tgctcatccc catcgtcacc tgcctgttgt tgcaatggac cgtgtcgatc gcctgctacg
     4261 ggcatttcct gcgtgaccag tcccactccg agcgctgggg ctggggcatt gtgtccttcg
     4321 cgggctacgc cgggctctgc acgcatggga gcacatggaa tctcatcttc gtggcgctga
     4381 tgctcatgat gggcggctac gtctacttca ctcgcgacaa ggtcatcgag gctgccgagc
     4441 gcgaacgtca acgcgtcaaa agacaggctg cgcccgatcc tgatctgccg ctcgaaggac
     4501 gctatgagta acggaaagat aggtagacac atgaaaccca atcttaccga ccccggcaaa
     4561 gtcattatca ccatcgcgac caccggcggc ctgcacggga gagaatccaa tccggcattg
     4621 cccgagcaac cgaaggacat catccggaat ttccacgatt gctataacgc cggcgcgacc
     4681 gttgcccaca tgcatgtgcg cgacaagcgc ggcgtgacta cggccgatct cgatgtctat
     4741 ggcgaggtaa tcgagggcgt gatgtcgcaa tgcccgggca tgatcacgca agtcggcaac
     4801 ggcatcggat tgcgttatga gaacccaaaa gcggaaggtg agccgttctc gctggaagag
     4861 cggatgaacc tgcttaacat tcgaccgcaa ccggatcagc tcacgctcaa cctcggtacc
     4921 ttccatttcg aacacaaaaa cactgaattt ctgtttccca actcgaaaaa atggaacgcc
     4981 gaatttgtag ccggttgcaa gaaacgcagt attcgcaacg aattcgaggt ctatgacctc
     5041 agtcacatac agaatgccat cgacctgatg gaacgcggcg cgcttgagcc gccgctacat
     5101 ttcagtttcg tgctcggcat caagggaggc attccggcga caccggcgaa tctacttgcc
     5161 atgctcgatg ccattccgga cggctcgtcc tggcaggtgg tcagcatcgg taaatatcaa
     5221 ctgccattaa gtacgatggc cctcgcttta gggggcaaca tccgggttgg catggaagac
     5281 aatgtttatt tcagccacgg gttgctggcg gttagcaacg cacagctggt cgaacgcgct
     5341 gcccgcattg tgcgcgagct gggtcgcgag attgcgaccc ctgaggaggc gcgcgaactg
     5401 atgcatcttg ggccaacacc gcagcgaccg ccatcggccg cgcgcgcatc atgacgaagg
     5461 cgcctaagcg cgatatggcc gtagatacca aatgagtcac tttgaaatcg cgatgcgatc
     5521 gaaatggatc tcaatctaaa agatcgcgtc gcgattgtta ccggcggcgc cgccggcatc
     5581 ggtgaggcaa tcgcccgctc gctttctgcg gaaggctgct cgatttgcat tcttgaccga
     5641 aacgccgacg ctgcaaacaa gatcgcttcg gctatcgcgc agagcggaac gccggctcgt
     5701 gctgctgccg ccgatgtcgc tgatgctgac gcggttacgc acgaatttgg gcaattcgca
     5761 gctgcttttg gtcgcatcga cattctggtg aatgcagccg gtctgctttc gaccggtccc
     5821 gccgctgact tacccgcacc tgagtggcag aagttgagcg acgtcaactt gtcgggcgtg
     5881 ctttattgca cgcaggccgc gattccggtc atgcgtcggc agcgctatgg gcgcatcatc
     5941 aatattgcct cggtcgctgc aatgcgcggt ggcggaacgg tcggcaacgc tctttacggt
     6001 gcaaccaaag ccggtgttgt ggccttgacc atgggattcg cccgcgagct tggcccgcac
     6061 ggcatcaccg tcaatgccgt cgcgcccgcc attgccgaca cggcgatgac gcgcacggtc
     6121 ctcaccgacg aggtgcggac gaaagtattg gagcgaattc cgctccgacg cttgactacc
     6181 ccggtcgatg ttgcggacct ggctgtgttt ctcgcgtccg cgcgcgcgag cttcatctcc
     6241 ggcgccgtca ttcctgtaga cggtggcatt ctgactacgt agcgagatag cagaatgcgt
     6301 tgtcgaggtt tgcgcaacga gcggccgttt gtcgcagcgg caagacataa caacgaccga
     6361 gcaatcgatc gaagaccgtt gcccatactc gaacgctgga aggtgacgaa tgtttggccc
     6421 ttgatcaggt ttgtcgagcc ggtacgatag ttttggcgaa gcttgaaaat gtagtcggca
     6481 ttgtgacaaa agaaattgag caagcgaaaa aagaatcggc gtctcgtgat catgaagagc
     6541 gtttagccaa gctcgaacgt gaattgcggg cgagtgagga gcggtggcag gcgatagtcg
     6601 cgaacccgtt catgggtatt acggttctcg acagaaacca atatttcgta gcggccaatt
     6661 cgacctatca agccatggtc ggttacacgg aagacgaact cagaaagctg acgccgttag
     6721 atatcactcc gccgattgat cgggagatca acagggcact cttcaaggag cttcaacagg
     6781 atgtgcgcca gcactacgag ctgacaaagc ggcttcagcg taaagatggc gaactgatct
     6841 ggatccagtt gtatgttttt ggaattccgg atcgtggttc ggtcggcatg acggttgata
     6901 tcaccgaaaa aatgcgcgct cagcatgccc tgcaggtcgc ccacgaggag cttgcacgct
     6961 cggcacacgt gagccgaatg ggcgcgataa ctgcgtcaat tgctcacgag atcaatcaac
     7021 cgctgggcgc cattgttgca aatgccggcg cgggcctgcg ctggctggca cgaaccccgc
     7081 ccgaccttgc cgaggcgcgg gaaagcattg agcagattgt tcgcgaggga caacgcgcgg
     7141 ccgacgtggt ccagagcgtg cgatcgatgt tcaaatcccg ggatttggag catgtgccca
     7201 ctaatttgaa tcgcctcatc gaccaggtac tcgcgctggt tcagggaacg cttgaaagaa
     7261 aaggggttgt cgttcgcacc gacctggatg aaacgcctgc gtccgtgacg ggcaatccgg
     7321 tacagattca gcaggtcctt ttcaaccttg tgagcaatgc catcgaggcg atggactccg
     7381 tcgccgaacg tgtgatttcg atcaagaccg aaatagaaga aagtggcgac gtacaggtca
     7441 ccgttgaaga ttctggcagc ggcatcgatc cgaaaaatat ggatcggatc tttgattcgt
     7501 ttttcacgac caagctgaac ggtatgggaa tgggtctgtc gatttgccgg tcaatcatcg
     7561 aatctcacgg cggtcgattg tgggccgcct ctggctcctc ccgcggagcg atctttcggt
     7621 tcacattgcc ggctgagtaa aaaaacacgt cgcggtgacg aggcggcaaa agcccttggc
     7681 cgccggggaa agcgaccaag ggccgtgggg acgggcaaag taggggacgg attgcccgct
     7741 tgttccgtga gttgtgatcg gatttgggcc gttgcaacga cccgcagcga gccagcaact
     7801 gaaatttaaa a
//
LOCUS       DATDHO010000619         2635 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_278029, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000619 DATDHO010000000
VERSION     DATDHO010000619.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2635
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278029"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..885)
                     /locus_tag="VIY07_11915"
     CDS             complement(<1..885)
                     /locus_tag="VIY07_11915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382494.1"
                     /translation="MKIVSSLFVCALSIAPAFANDQPKFQVDASWPKTLPNNWIMGQA
                     AGVAVDAQDHVWVVQRPRSLTDDEKAATFNPPRTKCCLPAPPVMEFDQEGNLLRAWGG
                     PGQGYDWFGNEHGINIDHKGFVWVGGNGNNDGHVLKFTQDGKFVLQIGKPGPQTGSAD
                     TTRLGRPADTEVDPATNEIYIADGYGNHRVIVFDADTGAYKRHWGAYGKAPDDAKQPP
                     YNPAGAPQQQFANPVHCVKVAKDGLVYICDRSNDRIQVFRKDGTFVKEFFVAKETLQQ
                     GSVWDLDLWPDSQQTFLMN"
     gene            complement(981..2153)
                     /locus_tag="VIY07_11920"
     CDS             complement(981..2153)
                     /locus_tag="VIY07_11920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018237367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEY6382495.1"
                     /translation="MAKPLAGLRVLELARILAGPWAGQVLADLGADVIKVERKGSGDD
                     TRGWGPPFVEGVDGNHIGSAYFHSTNRGKRSIEMDFESDEGRRIVRKLAARSDVLIEN
                     FKVGGLVKFGLDYKSLAPECPRLIYCSVTGFGQEGPYAKRAGYDLMAQGIGGIMDLTG
                     MADGEPTRIGIPVSDIFTGVYSVIGILAALAQRERTGKGCYVDTALVDSTVGILSNQA
                     MNYLVSGNVPKRIGNAHANIVPYQVFPVADGHVIVATGNDNQYVKFCNVLGAPELAQN
                     PAYKDNVGRLKHRAELIGKLSALTARMKRDDLLDKLEVQQVPAGPINDLEQVFNDEQV
                     VHRGMKLSLPSADAKGGKIPGVRTPIVIDGWKAGSERPSPRLGEHTAEILREIGEG"
     gene            complement(2209..>2635)
                     /locus_tag="VIY07_11925"
     CDS             complement(2209..>2635)
                     /locus_tag="VIY07_11925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382496.1"
                     /translation="DVNLIVAIAIPIIPRVARVVRAAALSVRVMPYIDAARAAGYSPT
                     RIIFRHIAPNVVAPYLIMLTAFIAQAILAEASLSFLGLGVTEPTAAWGLMLSGNAADF
                     YRQAPWMILFPGIAISLAVFAFNLFGDSLRDYLDPRFKV"
BASE COUNT          478 a          803 c          844 g          510 t
ORIGIN      
        1 gttcatcaaa aaggtctgct gtgagtccgg ccacaaatcg aggtcccaca ccgacccctg
       61 ttgcagcgtc tctttcgcga cgaaaaattc cttcacgaac gtgccgtctt tgcggaagac
      121 ctggatgcgg tcgttcgagc ggtcgcagat gtagaccagg ccgtccttgg cgaccttcac
      181 gcagtggacc ggattggcga actgctgctg cggcgcgccg gccgggttgt aaggcggctg
      241 cttggcatca tccggcgcct tgccgtaggc gccccagtgc cgcttgtaag cgccggtatc
      301 ggcgtcgaac acgatgacgc ggtgattgcc gtaaccgtcg gcgatgtaga tctcattggt
      361 cgcgggatcg acttcggtat cggcgggccg gcccaggcgg gttgtatcgg cgctgccggt
      421 ctgcgggccg ggtttgccga tctgcagcac gaactttccg tcctgggtga atttcagcac
      481 atggccatca ttgttgccgt tgccaccgac ccagacgaac cccttgtggt caatattgat
      541 gccatgctcg ttcccgaacc aatcgtagcc ttgcccgggt cctccccacg ccctgagcag
      601 attgccctcc tggtcgaact ccatcacggg cggcgccggc agacagcact ttgtgcgcgg
      661 cgggttgaag gttgcggcct tttcatcgtc agtcagcgag cgcggccgct gaacgaccca
      721 gacatgatcc tgcgcgtcga cggccacgcc tgcggcctgt cccatgatcc agttgttcgg
      781 cagcgtcttc ggccaggatg cgtcgacctg gaacttcggc tggtcattgg cgaaggctgg
      841 tgcgatcgac agagcgcaca cgaaaaggga cgaaacgatt ttcatgatgt cctcccggca
      901 ccggcggcag accggcgttg gtccaatgct ctgccttcag tcaggcgcaa tcaaggggct
      961 tgaggcccaa cgcggcagga tcagccttcg ccgatctcac gcaggatttc agccgtgtgc
     1021 tctccgagac gcggggaggg gcgttcggaa ccggccttcc agccgtcgat aacgatcggt
     1081 gtgcgcacgc cgggaatctt gccgcctttg gcatccgcgc tcggcagcga tagcttcatc
     1141 ccgcgatgca ccacctgctc atcgttgaag acctgctcga ggtcgttgat cggaccggcg
     1201 ggcacttgct gcacctcgag cttgtcaagc aagtcgtcgc gtttcatgcg cgcggtcaac
     1261 gctgacagct tgccgatcaa ttctgcacgg tgcttgagcc tcccgacatt gtccttgtaa
     1321 gcgggatttt gcgcgagctc cggtgcgccc agcacgttgc aaaatttgac gtactggttg
     1381 tcattaccgg tggcgacgat gacgtgaccg tcagcgacag gaaagacctg gtaggggaca
     1441 atattggcgt gcgcgttgcc gatgcgcttt ggcacattgc ctgacaccag atagttcatc
     1501 gcctggttgg acaaaatgcc gaccgtggaa tcgaccagtg cggtgtcgac atagcagcct
     1561 ttgccggttc gttcgcgctg cgccaacgct gcaagaatgc cgatgaccga atacacgccg
     1621 gtgaagatgt cggacacagg aatgccgatg cgggtcggct cgccgtccgc catcccggtc
     1681 aagtccatga tgccgccgat gccctgcgcc atcaggtcat agccggcgcg cttggcgtag
     1741 gggccctcct ggccgaaacc ggtgaccgag caataaatca gtcgtgggca ctcgggcgcg
     1801 aggcttttgt agtcgaggcc gaatttcacc aggccgccaa ccttgaagtt ttcaatgagg
     1861 acatcggagc gggccgccaa tttccgtacg atgcgacggc cttcgtcgct ctcgaagtcc
     1921 atttcaatcg agcgcttgcc tcgattcgtg gaatgaaaat aggccgagcc gatgtggttg
     1981 ccatcaacgc cttcaacaaa aggcggaccc catccgcggg tatcgtcgcc ggagcccttg
     2041 cgctcgactt tgatgacgtc ggcgcccagg tcggccagca cctgtccggc ccaggggcca
     2101 gccaggatgc gggccaattc gaggacgcgg aggcctgcga ggggtttcgc catggaattt
     2161 tccttgagct tttcttgctt cgcgcgagcg gcgccggctg ctgcgccgtt ataccttgaa
     2221 gcgcggatcg agatagtccc gcaggctgtc gccgaacaag ttgaaggcga acaccgctag
     2281 gctgatcgcg atacccggga acaggatcat ccagggcgcc tgccggtaga agtcggcggc
     2341 attgcccgag agcatcagcc cccaggcggc ggtcggctcg gtcacgccga ggccgaggaa
     2401 cgacagcgag gcctccgcca ggatagcctg cgcgatgaag gcggtcagca tgatgaggta
     2461 gggcgccacc acgttcggcg cgatgtgccg gaagatgatg cgggtcgggg aatagccggc
     2521 ggcgcgcgcg gcgtcgatat agggcatcac ccgcaccgac agcgcggcgg cgcgcacgac
     2581 gcgagcgacg cgcgggatga tcggaatggc gatggcgacg atcagattca cgtcg
//
LOCUS       DATDHO010000620         3658 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_75412, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000620 DATDHO010000000
VERSION     DATDHO010000620.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3658
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75412"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(270..1565)
                     /locus_tag="VIY07_11930"
     CDS             complement(270..1565)
                     /locus_tag="VIY07_11930"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEY6382497.1"
                     /translation="MANVVVVGSQWGDEGKGKIVDWLSEQADIVVRFQGGHNAGHTLV
                     INGSTYKLSLLPSGVVREGKLSIIGNGVVIDPQAFVDEIAQLKKQGIVVTPTSLRIAE
                     NAILILPLHRELEALREAENAATRIGTTKRGIGPAYEDKVGRRAIRFMDLADLPALRG
                     KIDRLLAHHNALRRGHGLPEIAAEAVYDHLASIAPKVLPFMDSVWSLLDSKRREGKRI
                     LFEGAQGALLDIDHGTYPYVTSSNTVAAQAATGSGLGPNAIDYVLGICKAYTTRVGLG
                     PFPTDQMDNAIGKTLGERGSEFGTVTGRARRCGWFDAVLVRQTVRTGGIDGLALTKLD
                     ILDGFDEIKVCVRYRLDGREIDYLPAGEQAQARAEPVYETIGGWKQPTACARSWAQLP
                     AQAIKYVRRIEELVGCPVALLSTSPEREDTILMKNPFEV"
     gene            complement(1725..3323)
                     /gene="serA"
                     /locus_tag="VIY07_11935"
     CDS             complement(1725..3323)
                     /gene="serA"
                     /locus_tag="VIY07_11935"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEY6382498.1"
                     /translation="MTPKTMPKVLISDALSPAAVQIFKDRGVEVDFQPALGKDKDKLA
                     AIVGNFEGLAIRSATKVTAKILERANSLKVIGRAGIGVDNVDIPAATARGIIVMNTPF
                     GNSITTAEHAISLMLALARQIPEADASTRAGKWEKNKFMGVEMFGKTLGVIGCGNVGS
                     IVADRALGLKMKVIAYDPFLSPDRATDLGVEKVELDGLLKRADFITLHTPLTDKTRNI
                     ISADAIKKMKKGVRIVNCARGGLVDEAALSEALKDGHVGGAAFDVFVTEPATENPLFN
                     LPNVVCTPHLGASTSEAQENVALQIAEQMSDYLLRGAISNAINFPSISAEEAPKLKPF
                     IALAEKLGSFAGQLTETGISKVQLTYEGAVAQMNTKALTSAALAGLLRPMLGDVNVVS
                     APVVAKERGIIVEEITREMPEDYESLITVTVTTERQSRHVSGTVFADGRPRIVNIKGI
                     RMDAEFGASMIYITNLDKPGFIGKFSSTLGDAGINIATFHVGRDAPGGNAVALIEIDG
                     ELPDAVLAQVRALPQVQQAKPLRF"
     gene            complement(3332..>3658)
                     /locus_tag="VIY07_11940"
     CDS             complement(3332..>3658)
                     /locus_tag="VIY07_11940"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453561.1"
                     /note="catalyzes the formation of 3-phosphonooxypyruvate
                     and glutamate from O-phospho-L-serine and 2-oxoglutarate;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine aminotransferase"
                     /protein_id="HEY6382499.1"
                     /translation="LGDWVAATPWIAHLAKNSAERSNTSVCLKVVDASVTRLSGDEQA
                     AFAKTLAGLLEKEDVAYDIAFYRDAPPGLRIWCGATVEQHDIEALTPWLEWAFAEAKA
                     ALPKAA"
BASE COUNT          691 a         1127 c         1081 g          759 t
ORIGIN      
        1 gcttcctcca acgccagtcg ctcacgggta atatccgtct cgtcgagcgc aggcaccaca
       61 ccgcgcaact gggaaaccag cgcagcgcgc gcgcggtcgt acaaggcgcg cctgttttcg
      121 cccgtgttct tgtcccggcc atgaaccgcg cgctcgatga ggggatagta gtcagccatc
      181 gtgcttattg tgcttgattc atatcccatg gggaaagcct gccatcggca cggaagcaga
      241 cttgaccccc gttcttttgg tttgcccgat catacctcaa atgggttttt catgaggatc
      301 gtgtcctcac gttcggggct ggtggacaac agggcaaccg gacagccgac aagctcctcg
      361 atgcgccgca cgtattttat cgcttgcgcc ggcaactgcg cccaggaacg ggcgcatgcg
      421 gtcggctgct tccagccgcc gatggtctca tagaccggct ctgcgcgcgc ctgcgcctgt
      481 tcgccggcgg gaagataatc gatctcgcgt ccgtcgagcc gatagcgcac gcaaactttg
      541 atctcgtcga agccgtctag aatgtcgagt ttggtcagtg caaggccatc aatgccgccg
      601 gtccgaacag tttgtcgcac caggaccgca tcaaaccatc cgcatcggcg agccctgccc
      661 gtgacggtgc caaattcgct gccccgctcg ccgagagtct tgccaatagc attgtccatc
      721 tgatcggtcg ggaacggacc gaggccgacg cgcgtggtgt aagccttgca gatgccgagc
      781 acgtaatcga tggcattggg accgagccca gagccggtcg ctgcctgtgc ggcgacggtg
      841 ttcgaggatg tcacatacgg gtaagtgccg tggtcgatgt cgagcaatgc cccttgcgcg
      901 ccttcaaaca ggatgcgctt tccttcgcgc cgcttgctgt cgagcagcga ccagaccgaa
      961 tccatgaagg gcaaaacttt cggagcaatc gaggcaagat ggtcgtacac cgcctcggct
     1021 gcaatctcgg gcaacccgtg gccgcggcgc agggcattgt gatgcgcaag caaccggtcg
     1081 atctttcccc gcagcgccgg cagatccgcc aaatccatga agcggatggc gcgacggccg
     1141 accttgtcct cgtatgcagg accgatgccg cgcttggtcg tgccgatgcg ggttgcggca
     1201 ttctcggcct cgcgcagggc ctcgagctcg cggtgcagcg gcagtatcag aattgcattc
     1261 tcggcgatgc gcaaagacgt aggcgtcacg acgatgcctt gtttcttgag ttgggcaatc
     1321 tcgtcgacga acgcctgggg atcgatcacc acgccattgc cgataatcga caatttgcct
     1381 tcgcgcacga ccccggacgg gagcaacgac agcttgtacg ttgagccgtt gataaccagg
     1441 gtgtgcccgg cgttatggcc gccctgaaaa cggacaacga tatcggcctg ttccgaaagc
     1501 cagtcgacga tcttgccttt gccttcgtcg ccccactggg atccgacaac cacgacattc
     1561 gccatcagaa cccttccctg taccagcgcc cggacacttg gaaccgggag ccaccggcca
     1621 ggtccacctt cggataaagg atgctcccct tggaggcaag ccaaaggtcc gcggcgccgt
     1681 ggcaccagcc ggcaatgaca acagtttgat cttacgggtg aattctaaaa acgcagcggc
     1741 ttcgcctgct gcacctgtgg caaagctcgc acctgggcca atactgcgtc cggcagttcg
     1801 ccatcgatct cgatcagggc gaccgcgttc ccgcccggcg catcacggcc gacatggaaa
     1861 gtggcgatat ttatgccggc gtcgcccagc gtcgaagaaa atttgccgat gaagcctggt
     1921 ttgtccagat tggtgatgta gatcatcgag gcgccaaatt cggcatccat gcggatgccc
     1981 ttgatgttca cgatgcgcgg ccgcccatcg gcaaacaccg ttccagagac gtgtcgcgat
     2041 tgccgctcgg ttgtgaccgt cactgtgatc aggctttcgt aatcctcagg catttcgcgc
     2101 gtgatctcct caacgatgat gccacgctcc ttggccacca ccggtgcgga cacgacattg
     2161 acgtcgccga gcatcggacg cagcaggccg gcaagcgcgg ccgaagtgag cgcctttgta
     2221 ttcatctgcg cgactgcgcc ttcataagtg agttgtactt tgctgattcc cgtttcggtc
     2281 agctgccccg caaacgagcc cagcttctcg gccaatgcga tgaatggctt gagcttgggc
     2341 gcctcctcgg cactgatcga ggggaaattg atggcgttgc tgatcgctcc gcgcagcaga
     2401 tagtcggaca tctgctcggc gatctgaagc gcgacatttt cctgcgcttc actggtcgag
     2461 gcgccgagat gcggcgtgca gacgacattg ggcagattga acaatggatt ttcagtcgcc
     2521 ggctcggtca cgaaaacgtc gaacgcggcg ccgccaacgt ggccgtcttt aagcgcctcg
     2581 gagagcgcgg cctcgtccac cagaccgccg cgcgcgcagt taacgatgcg gacgcctttt
     2641 ttcattttct tgatggcgtc ggcgctgatg atgttgcggg tcttgtccgt cagcggcgtg
     2701 tgcagtgtta tgaaatcggc gcgctttaac agtccatcaa gctcgacttt ttcgacaccg
     2761 agatcggtcg cacggtccgg ggacaggaaa gggtcatagg caatcacttt catcttcagt
     2821 ccaagtgcgc ggtcggcaac gatcgatccg acgtttccgc atccgattac gccgagcgtt
     2881 ttgccgaaca tctccacgcc catgaacttg ttcttttccc atttgccggc gcgcgtcgac
     2941 gcatcggctt ccggaatctg tctcgccagc gccagcataa gcgagatcgc atgctccgcc
     3001 gtcgtgatcg aattcccgaa cggcgtgttc atgacgatga tgccgcgcgc tgtggccgcc
     3061 ggaatatcga cattgtccac gccgattccg gctctgccga tcaccttcag gctattggcg
     3121 cgctcgagta ttttggcggt gaccttggtg gccgagcgaa tcgcaaggcc ctcaaagttg
     3181 ccgacgatcg ccgcgagctt gtccttgtcc ttgcccagtg caggctggaa atcgacctcg
     3241 accccgcgat ccttgaagat ctgaacggcc gcaggcgaca gcgcgtctga aatgagaacc
     3301 ttgggcatcg tcttcggtgt catgagatgg gtcacgccgc tttaggcaat gcggccttgg
     3361 cttcggcaaa agcccattcg agccacggcg tgagtgcctc gatgtcgtgt tgttcgaccg
     3421 tcgcgccgca ccagatgcgc agccccggcg gtgcgtcccg ataaaaggca atgtcgtaag
     3481 cgacgtcctc tttttcgagc agaccggcca gtgttttggc gaaggcggcc tgctcgtcgc
     3541 ccgagagccg tgtcaccgac gcatcgacca ctttcagaca gacagatgta ttggagcgct
     3601 cggcggaatt ttttgcgaga tgagcgatcc agggcgtggc ggcgacccaa tctcccag
//
LOCUS       DATDHO010000621         7693 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_471878, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000621 DATDHO010000000
VERSION     DATDHO010000621.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7693
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_471878"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            283..999
                     /locus_tag="VIY07_11945"
     CDS             283..999
                     /locus_tag="VIY07_11945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44/TimA family putative adaptor protein"
                     /protein_id="HEY6382500.1"
                     /translation="MRDVFDIYTIIFLALAVFIFLRLRSVLGQRTGRERPPYDPYSAR
                     EPVRPAAEKIVSLPNRAAEAAAPKPTEQTDASGERWKGIAEPGSAVATGLDAVVSADP
                     SFDAQHFLTGARAAYEMIVNAYAEGDRRTLKNLLGREVYDGFESAISEREKRGETVES
                     RFVSIDNADIAGAELRGRNAQITVRFQSKLVSVTRDKNGNVIDGNAERVTDITDIWTF
                     ARDVSSRDPNWKLLATEAGQ"
     gene            1004..2263
                     /locus_tag="VIY07_11950"
     CDS             1004..2263
                     /locus_tag="VIY07_11950"
                     /inference="COORDINATES: protein motif:HMM:NF015523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MltA domain-containing protein"
                     /protein_id="HEY6382501.1"
                     /translation="MRLMGGPLPATLWAIFWLIAAASTPADAWSLRNAKVEALSFAAL
                     DGWKDDDHAAAFATFIKSCRAILNANKTMRSARPILGGLFKACERAAAAGDLDRDRAR
                     AFFENNFKPVRVKPGGQNEGFFTGYYETEVDGSRFPSAEYTVAIYSAPAETIRRRQSK
                     VFADLDRTRIEDGALAGKELEICYVKSPIDAFFAQIQGSTRVKLDSGKLLRLNYVASN
                     GMPYTPVGKFLIERGIVSKEEMSMDKIREFMEANPEEGKELRRKNRSFVFFQETSLSP
                     SDECIGAQGVPLTAGRSLAVDKRIHVYGTPIWVEAQLPIESEKPETRFRRLLFAQDTG
                     SAIVGPARADIYFGHGEEIGRIAGRIKQNGQFVMLVPQNLAVGGTGAKTPLPKSRPEM
                     TVTAAARAATETTGTVPAPRPRPRPRR"
     gene            2268..2822
                     /locus_tag="VIY07_11955"
     CDS             2268..2822
                     /locus_tag="VIY07_11955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEY6382502.1"
                     /translation="MSSRDGKRRRALSPEERVLWATVTKTIMPLREAPAGHEDDPVEP
                     AAPARSLSSAARSIRIGPGGSENRPPPLAPLGRRLKKRVGRGKKAIDGRLDLHGLTQS
                     QAHAALLHFLRSASVRGARLVLVVTGKGARAGEGERGVLKRAVPQWLGLPEFRAFVIG
                     YEDAHVVHGGEGALYIRIRRKRGE"
     gene            complement(2837..4144)
                     /gene="hslU"
                     /locus_tag="VIY07_11960"
     CDS             complement(2837..4144)
                     /gene="hslU"
                     /locus_tag="VIY07_11960"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HEY6382503.1"
                     /translation="MTDFSPREIVSELDRFIVGQGDAKRAVAIALRNRWRRLQLDEKL
                     REEVLPKNILMIGPTGVGKTEISRRLARLAGAPFLKVEATKFTEVGYVGRDVEQIVRD
                     LLEIGITLVRERKRKDVQARAEQSAEERVLNALVGPGASPATRESFRKKLRSGELNNK
                     EIEIEVQAGGASMPMFEIPGMPGAQMGAINLGDIFGKLGGGRTKTRRVTVDESHDILV
                     NEESDKLLDNDQLVQESIRAVEQNGIVFLDEIDKIAGREGLRGADVSREGVQRDLLPL
                     IEGTTVNTKHGPVKTDHILFIASGAFHISKPSDLLPELQGRLPIRVELKALTRDDFRR
                     ILTEPEASLIKQYVALLNTEGVALEFSEDAIDAIADIAVAVNSSVENIGARRLQTVME
                     RVLDEVSFAAPDRSGETVKIDAAYVQKHIGDLAANADLSRFIL"
     gene            complement(4141..4602)
                     /locus_tag="VIY07_11965"
     CDS             complement(4141..4602)
                     /locus_tag="VIY07_11965"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6382504.1"
                     /translation="MTSADLPLVRGWLGEPHVARWWGNSEEQFEVVRNDLDHPAMDQF
                     IASHSCRPFAYLQCYDLACWENGQIDPQPAGTRGIDQFIGEADMLDCGHGSAFIRAFT
                     DRLLTGGTPRVVTDPDPANARAIRAYEKAGFRRSRLVDTPDGCALLMVRNA"
     gene            complement(4635..5189)
                     /gene="hslV"
                     /locus_tag="VIY07_11970"
     CDS             complement(4635..5189)
                     /gene="hslV"
                     /locus_tag="VIY07_11970"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0051603 - proteolysis involved in protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEY6382505.1"
                     /translation="MSSKELPSWHGTTILTVRKGGSVVIGGDGQVSIGQTIVKSNAKK
                     VRRLGKGEVIGGFAGATADAFTLFERLEAKLEQYPGQLTRAAVELAKDWRTDRYLRRL
                     EAMMIVADTNVSLVLTGTGDVLEPENGVMGIGSGGNYALASARALLDGPLDAEAIVRK
                     SLDIAAEICVFTNRNVTIETLKST"
     gene            5315..5908
                     /gene="hisB"
                     /locus_tag="VIY07_11975"
     CDS             5315..5908
                     /gene="hisB"
                     /locus_tag="VIY07_11975"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEY6382506.1"
                     /translation="MRSGSVKRKTKETEVEVKLDLDGAGRASVATGIGFLDHMLDLLA
                     RHSRIDITVKAKGDLHIDHHHTTEDVGIAIGQAVKQALGDMKGITRYADVHVPMDEAL
                     TRVAIDISGRPFLVFKAEFVRDKSGEFDTELVQEWFQAFAMNAGITLHAETLYGTNDH
                     HIAESCFKGLARALRAAVAIDPRAKDEIPSTKGSLGG"
     gene            5970..6476
                     /locus_tag="VIY07_11980"
     CDS             5970..6476
                     /locus_tag="VIY07_11980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEY6382507.1"
                     /translation="MPTYTVHAPLPREGETTSAPERFVFVRDGFHFWAFLLAPLWLLL
                     HRLWLALVIYVVGFGLMGIGLALLRAPGTAQFLAAFLIALFIGFEASTIWRWTLTRRG
                     WRTLGFVVGEDAEIAEQRFFAEWTKRVANSSTNAASVDPKIAPPVRRGPPSPSDVIGL
                     FPEPGAQR"
     gene            6473..7123
                     /gene="hisH"
                     /locus_tag="VIY07_11985"
     CDS             6473..7123
                     /gene="hisH"
                     /locus_tag="VIY07_11985"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEY6382508.1"
                     /translation="MTVAIVDYGSGNLHSAAKAFERAARESGHEQPIAVTGDPEVVAR
                     ADRIVLPGVGAFADCRHGLDAIPGMVDALERSVRKKGTPFFGICVGMQLMAERGREYR
                     VTPGLGWLPGEVDRIRPSNPGLKIPHMGWNTLNILKAHPLLDGIPLGPRGLHAYFVHS
                     YELKTTGDEDLVAQADYGGPLTAVAGRDNMIGTQFHPEKSQRLGLALIANFLKWKP"
     gene            7111..>7693
                     /locus_tag="VIY07_11990"
     CDS             7111..>7693
                     /locus_tag="VIY07_11990"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_function: GO:0016860 - intramolecular oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]
                     imidazole-4-carboxamide isomerase"
                     /protein_id="HEY6382509.1"
                     /translation="MEAVILFPAIDLKEGIAVRLEQGDMARATIFHRDPAAQAHAFEQ
                     QGFQYLHIVDLDGAFAGKPMNAAAVDRILETVSVPVQLGGGIRDTATVENWLDKGISR
                     VIIGTAAVRDPPFVKQAARDFPGRIVVGLDARDGKVAVEGWAETSQLSALDIARRFED
                     VGVSAIIYTDIARDGMLQGLNLDATIAVADEVSI"
BASE COUNT         1556 a         2299 c         2319 g         1519 t
ORIGIN      
        1 caagtgaagg ccgccagttc cccaataacg cggccctcgg cacccatttt gccacattca
       61 tcagcgtttc tctgtcttgg cgatgttggc cttggccctc cgatcgtcta aggtcgggtt
      121 gagagcgaat ggcgccgtag ctatgtggcg cgagaggtcc ggtcccctgg gattggtgct
      181 gccacggcgg atgcaagagc ggtggccaac tgctcagcca accgggaggc gagggtccgg
      241 aaggccgatc cggacaattc gccgtgtacg gcagccgaaa gcatgcgaga cgtgttcgac
      301 atctacacca tcattttcct ggcgctcgca gttttcatct tcctgcgatt gcgcagcgtg
      361 ctgggccagc gcacaggcag ggaacgtcca ccttacgatc cctattccgc ccgcgagccg
      421 gtgcgacctg cagcggaaaa aatagtttcg cttccgaatc gcgcagcaga agcggccgca
      481 cccaagccga ccgagcaaac ggatgcttct ggcgaacgtt ggaagggaat tgccgaacca
      541 ggctcggccg tcgcgaccgg cctcgatgcc gtcgtttccg ctgatcccag ttttgacgcc
      601 cagcactttc tcactggtgc gcgcgcggca tatgaaatga tcgtaaatgc ctatgccgag
      661 ggcgatcgcc gcactttgaa gaatttgctt ggccgcgaag tatacgatgg ttttgaaagc
      721 gcgatcagcg aacgtgagaa acgcggcgaa acggttgaaa gccgttttgt gtcgatcgac
      781 aatgccgata tcgccggcgc cgaattacgc gggcgcaacg ctcagatcac cgtccgtttc
      841 cagtccaagc tcgtatcggt gacacgcgac aagaatggca acgtcattga cggcaacgcc
      901 gagcgcgtga ctgacattac cgatatctgg acgttcgcgc gcgacgtcag ttcgcgcgat
      961 ccgaattgga aattgcttgc cacggaggcc gggcaataag cgcatgcggc tgatgggggg
     1021 tcctttaccg gccacattgt gggcaatttt ctggttgatc gcggcagcga gcacgcccgc
     1081 ggatgcgtgg agccttcgca acgcgaaggt tgaggcactg tcatttgcag cactcgacgg
     1141 ctggaaagac gacgatcacg cggccgcttt cgcgacgttc ataaaaagtt gtcgcgccat
     1201 tctcaatgca aacaagacga tgcgttcagc gcggccgatc ctgggcggac tgttcaaggc
     1261 gtgcgaacgc gccgcggcag ccggcgatct cgatcgcgat cgcgcgcggg ctttcttcga
     1321 gaacaacttt aaaccggtgc gagtcaagcc tggcggccag aacgaaggtt tcttcaccgg
     1381 ttactacgag accgaggtag acggctctcg cttcccaagc gctgagtata cagtggccat
     1441 ctattcagcg ccggccgaga cgatcaggcg ccggcaaagc aaggtgttcg ccgatcttga
     1501 tcgcaccagg atcgaggacg gcgccttggc cgggaaggaa ctggaaatct gttacgttaa
     1561 gagtccgatt gacgcgttct tcgcgcagat ccagggatcc acccgcgtca agctcgacag
     1621 cggcaagctc ctgcgactga actacgtcgc aagcaacggc atgccgtata cgccggtcgg
     1681 aaaattcctc atcgagcgcg gcattgtctc caaagaagaa atgtcgatgg acaagatccg
     1741 cgagtttatg gaagccaatc cggaggaggg caaagaactg cggcgcaaga accgctcctt
     1801 cgtgttcttc caggaaactt ccctgagtcc gagcgacgaa tgcattggcg ctcaaggcgt
     1861 gccactgacc gcggggcggt ccctcgccgt cgataaacgc atccacgtgt atggcacgcc
     1921 gatctgggtg gaggcccagc tgccgatcga gagcgaaaag cccgaaaccc gctttcggcg
     1981 cttgctgttt gcgcaggata cgggctccgc gatcgtcgga cccgcgcgag ccgatatcta
     2041 ctttggccac ggcgaggaga tcggtcgcat tgccggccga atcaagcaga acggacaatt
     2101 tgtgatgctc gtcccgcaga acctggcggt gggcggaacc ggtgcaaaaa ccccgcttcc
     2161 aaagtcgcga cccgaaatga cagtcacagc ggcggcccga gccgctaccg aaacgaccgg
     2221 aaccgtaccg gcaccgaggc cgaggccgag gcctcggcga tgatgcgatg agctctcgcg
     2281 atggcaagcg gcgccgcgcg ctttctccgg aagaacgcgt gctatgggca actgtcacca
     2341 aaacgataat gccgttgcgg gaagccccgg caggacatga ggacgatccg gtcgaacccg
     2401 cagctcccgc ccgatccctt tcgtccgccg caaggtctat ccggatcggg cctggcggtt
     2461 cagaaaacag gccacctcca ctcgcgccgc tcggtcgccg cctgaagaag cgtgtaggac
     2521 ggggcaagaa agcgatcgac ggccgcctcg atcttcacgg actgacgcaa agtcaggcgc
     2581 atgcggcact actgcatttt cttcggtcag caagcgtgcg gggcgcacga ttggtgttgg
     2641 ttgtcaccgg caagggcgcc cgtgcagggg aaggtgaacg cggcgtcctc aagcgtgcgg
     2701 tgccgcagtg gttgggactt ccggaatttc gcgcattcgt catcggttac gaggacgccc
     2761 acgtggtcca tggcggcgaa ggcgcgcttt acattcgaat acgccgcaag cgcggcgaat
     2821 gaacgtcgcg cagatctcaa aggataaatc gacttagatc ggcgttggcg gcgagatcgc
     2881 caatatgttt ctgcacgtac gcggcatcga ttttcacggt ttcgcccgac cggtcagggg
     2941 cagcgaacga cacctcatcg agaacccgct ccatcacggt ttgaagacgc cgggcgccga
     3001 tattctcgac gctggaattc acggccaccg cgatgtcggc aatggcatcg atcgcgtcct
     3061 cactgaactc aagcgccacg ccttcggtat tcaacaacgc cacatattgc ttgatcagcg
     3121 aggcttcagg ctcggtaagg atacggcgga aatcgtctcg ggtcagagcc ttgagttcga
     3181 cgcggatggg aaggcgtccc tgcaattcgg gcagcagatc cgacggcttc gagatgtgaa
     3241 acgcccccga cgcgataaaa aggatatggt cggttttcac ggggccgtgc tttgtattga
     3301 cggtggttcc ttcgatcagt ggcaataagt ctcgctggac gccttcacgc gatacgtcgg
     3361 cgcctcgcag tccttcacgt ccggcgatct tgtcgatctc atcgaggaac acgattccgt
     3421 tctgctcgac cgcacgtatc gattcctgca caagttgatc attgtcgagc agcttgtcgg
     3481 attcttcatt caccagaatg tcatgcgatt catcgacggt tacccgccgg gtcttggtac
     3541 gaccaccgcc gagctttccg aagatgtcgc caagattgat cgcgcccatc tgcgctccgg
     3601 gcataccggg aatttcgaac atcggcatgc tggcaccgcc cgcctgcacc tcgatctcga
     3661 tttccttgtt gttgagttca ccgctacgca gctttttgcg gaaactctcg cgcgtggcag
     3721 gacttgctcc cggaccgaca agggcgttga gcactcgctc ttcggccgat tgttccgcgc
     3781 gcgcctgcac gtcctttcgt tttcgctcgc ggaccagcgt aatgccgatc tcgagcagat
     3841 cgcgaacgat ctgctcgaca tcgcgtccaa catagccaac ttcagtaaat ttcgtagcct
     3901 cgaccttgag aaaaggagcg ccggccagcc tggcaagccg acgagaaatt tcggtcttgc
     3961 caaccccggt tgggccaatc atcaaaatat tttttggaag aacctcctcg cgcagcttct
     4021 cgtcgagctg caacctccgc cagcggttcc gcagtgcaat cgcgaccgcg cgttttgcat
     4081 cgccttggcc gacgataaag cgatcaagtt cagagacgat ttcgcgggga gagaagtcag
     4141 tcatgcgttt cgcaccatca agagagcgca accatccggc gtgtcgacga gccggctcct
     4201 tcgaaacccg gccttttcgt acgctcggat cgcgcgcgca ttggcgggat cgggatcggt
     4261 caccacgcgc ggcgtcccgc cggtcaacaa gcgatcggtg aatgcccgaa taaaagcgga
     4321 accgtgtccg caatccagca tgtcagcttc gccgatgaat tgatcaatgc cacgcgtccc
     4381 cgcgggttgc gggtctatct ggccattttc ccaacacgcc agatcgtagc actgcaaata
     4441 ggcgaacggt cggcagctgt gcgaggcgat gaactgatcc atagccgggt gatcgaggtc
     4501 gttgcggacg acctcgaatt gctcttccga attgccccac caccgagcaa cgtgcggttc
     4561 gccgagccaa ccgcgaacga gcggcaggtc ggcggacgtc attggacgaa actcgtacat
     4621 gcggcgcttt atggtcaggt gcttttcaac gtctcaatcg tgacgttgcg gttggtgaaa
     4681 acgcagatct cggcagcgat atcaagcgat ttccggacaa ttgcttcggc atcgagcggg
     4741 ccatcaagca gggcccgcgc cgaggcaagg gcgtaattac cgcccgaacc aatgcccatg
     4801 actccgttct caggctcgag cacatcgccc gtgccggtga gcaccaggga aacgttcgta
     4861 tctgcgacga tcatcattgc ttcgagacga cgcaggtatc gatcggtgcg ccaatccttc
     4921 gcgagctcga ccgcggcgcg cgtcagctgc ccggggtatt gctcaagttt ggcctccagg
     4981 cgctcaaaca gcgtgaatgc gtcggcagtt gcgccggcaa acccgccgat cacctcgccc
     5041 ttgccgaggc ggcgcacttt tttggcattt gatttgacaa tagtttgccc gatcgaaacc
     5101 tggccgtcgc cgccgatcac cacgctgccg cccttgcgga cggtaagaat ggtcgtgccg
     5161 tgccaggagg gaagctcttt cgatgacata tggttaaaag ccccgcgatc tgctccatct
     5221 aggcatgctc cggcgcgttt gcaaaccacg cgcgacggat gtggcgaatc cgacagaccc
     5281 ctgataaaag gcgcgccaac aggatgttcg agcaatgcgc agcggttcgg taaaacgcaa
     5341 gaccaaggaa accgaagtcg aggtcaaact cgacctcgac ggcgcaggtc gtgcgtcagt
     5401 cgcgaccggg atcggattcc tcgaccacat gcttgatctg ttggcgcgtc attcgcgcat
     5461 tgatattacg gtgaaggcca agggtgatct gcacatcgat caccatcaca cgacggaaga
     5521 cgtcggcatc gcgatcggtc aggcggtgaa acaagccctc ggcgatatga aagggatcac
     5581 gcgctatgcc gatgtgcatg tgccaatgga tgaggcgctg acgcgcgtcg ccattgatat
     5641 ttccggccgc ccatttcttg tgttcaaggc cgaattcgtg cgcgacaaga gtggcgaatt
     5701 cgacacagaa ctggtccagg aatggttcca ggcgttcgct atgaatgccg gcatcacgct
     5761 gcatgccgaa actttgtacg gcaccaacga tcaccacatc gcggagtcat gctttaaagg
     5821 gctggcccgc gccttgcgag cagccgtcgc catcgatccg cgcgcgaagg acgaaatacc
     5881 ttctacaaaa ggttcgctcg gcggctgatt cgactcggat ctgttcgcgg gatgcgcggc
     5941 gcaatagatt tggaccatag gaccagacaa tgcccaccta caccgttcac gcgccgctgc
     6001 cccgagaagg cgagacaacg agcgctcccg agcgctttgt gttcgtgcgc gatggttttc
     6061 acttctgggc ttttctgctg gcgccgttgt ggctccttct gcaccgcctg tggcttgcgc
     6121 ttgtgatcta tgtcgtcggc tttggcttga tgggtatcgg ccttgcgctg ttgcgcgcgc
     6181 cgggcactgc gcaatttctt gcagcatttc tgatcgctct cttcataggt tttgaggcat
     6241 ccaccatctg gcggtggact ctgacgcgcc gcggctggcg cacgctcggc tttgttgtcg
     6301 gcgaggacgc cgaaattgcc gaacagcgct tttttgcaga atggacaaag cgcgtcgcaa
     6361 attcatcgac gaatgccgca tcggtcgacc caaaaattgc gccgccggtg cggcgcgggc
     6421 cgccctcgcc gtcggacgtg atcggattgt ttccggagcc gggagcccaa cggtgaccgt
     6481 tgctatcgta gattacggtt caggcaatct gcattcggcc gcgaaggctt ttgagcgcgc
     6541 cgctcgcgaa agcgggcatg agcaaccgat cgcagtcacc ggcgatcctg aagtggttgc
     6601 gcgcgctgac cggattgtgc tgcccggagt cggcgcattc gccgattgcc ggcacggcct
     6661 tgatgcaatc ccgggcatgg tcgacgcgct tgagcggagt gtccgcaaaa agggcacacc
     6721 tttcttcggc atctgcgtcg gcatgcaact gatggcggaa cgcggacgcg agtaccgggt
     6781 gacgccgggc ctgggctggt tgccaggcga agtcgatcgc attaggccat cgaatcccgg
     6841 gttgaagatt ccacatatgg ggtggaacac cctgaatata ctcaaagctc atcctctgct
     6901 cgacgggata ccgctcgggc cgcggggact gcatgcatat ttcgtccatt catacgagtt
     6961 gaagaccact ggggacgaag acctggtggc ccaggcggac tacggcggcc cgcttacggc
     7021 cgttgccggc cgcgacaaca tgatcgggac gcaattccac ccggaaaaaa gtcagcgcct
     7081 gggcctggcg ctgatcgcga atttcttgaa gtggaagccg tgattctttt tcccgccatc
     7141 gatctcaagg agggaatcgc cgttcggctg gagcagggcg atatggctcg tgccacaatt
     7201 tttcaccggg atcccgccgc acaggcgcac gcgttcgagc aacagggctt tcagtatctg
     7261 cacatcgtcg acctggatgg cgcctttgcc ggcaagccga tgaacgcggc tgcggtcgac
     7321 agaattctcg aaacggtgag cgtcccggtc cagctcggcg gcggcattcg cgacaccgcc
     7381 acggtcgaga attggctgga taaaggcatt tcacgcgtca ttatcggcac cgcggcggtc
     7441 cgcgatccgc cgttcgtcaa acaggccgcc cgcgactttc ccggccgcat cgtggtgggc
     7501 ctcgatgcgc gcgacggcaa agtcgccgtc gaaggttggg cggaaacatc gcagttatcc
     7561 gcgctcgaca tagctcggcg gttcgaggac gtcggcgtat ctgcaatcat atacacggac
     7621 atcgcgcggg acggcatgct tcaggggctc aacctggacg ccaccattgc ggttgccgac
     7681 gaggtgagta ttc
//
LOCUS       DATDHO010000622         3545 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_327320, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000622 DATDHO010000000
VERSION     DATDHO010000622.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3545)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3545)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3545
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_327320"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VIY07_11995"
     CDS             complement(<1..227)
                     /locus_tag="VIY07_11995"
                     /inference="COORDINATES: protein motif:HMM:NF015683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HEY6382510.1"
                     /translation="MWLEQSVERKALPKDADQFNSLHERLIQGWTEIGKSRPLHLTAM
                     MDSPEDAGTIAYLQDCAHQAGLATTVLPIEDV"
     gene            complement(149..625)
                     /locus_tag="VIY07_12000"
     CDS             complement(149..625)
                     /locus_tag="VIY07_12000"
                     /inference="COORDINATES: protein motif:HMM:NF015683.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HEY6382511.1"
                     /translation="MRRISCEERPDWRARAEEIGFDFHTLDGRRYWDERAYYAFTLEE
                     IEQDLEAPTAELEEMSRELVARIIADERLMRRLAIPVRFWNWLARSWKKSEPSLYGRF
                     DLRYGGDGPAKLLEYNADTPTSVLETGVFNGCGWSSQSSAKPCRKMQTNSIRCTSD"
     gene            complement(1031..1435)
                     /locus_tag="VIY07_12005"
     CDS             complement(1031..1435)
                     /locus_tag="VIY07_12005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HEY6382512.1"
                     /translation="MVMQSLQGLPAFIAYFCLATVLVIAFLLIYTRITPMNEFELIRK
                     NVPGAAIALGLSLFGFSLPLASAIAHASDLVDCAVWGVVAIIVQIITFYAVRIPVPDL
                     SNRIAAGDVAPAIWLGLSSITAGLLSAASMTL"
     gene            complement(1517..2680)
                     /locus_tag="VIY07_12010"
     CDS             complement(1517..2680)
                     /locus_tag="VIY07_12010"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6382513.1"
                     /translation="MGRVLNLMAFVVFATTLFMRSVDPVIPQIAEGLSVTPTTAAMLS
                     TGFTLPYALIQPVLGALADMFSKTRLIAVCMLIVGIATLACGLATNFETLMALRVVAG
                     ITAGGVFPIALAVAGDRVPVQQRQVAIGRLLFAAMSGNLLGASGAGVIGDLFGWRGVF
                     FVTGAIDLIALAVAYPGFRSMDEKTGRFDLSTLLPNYRAIFSNPMAKYCFGAVFLEGV
                     FLFGLFPYMAEFLRTEGESRASIAGIVIAGFGIGGVIYTFMVGWLLDHFRERQLMAAG
                     GMVMGFCLVVIALRMPWPVEFANFMLLGFGFYLLHGCIQVYVTELAPAARGSATAGHS
                     MFFFLGHAAGPVVYGLGLSGVGATPVLLFGAAVLAATGWICALRLKHSPARQS"
     gene            complement(2699..3535)
                     /gene="kdsA"
                     /locus_tag="VIY07_12015"
     CDS             complement(2699..3535)
                     /gene="kdsA"
                     /locus_tag="VIY07_12015"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEY6382514.1"
                     /translation="MDQKPNATVSVGSVRFGNALPLALIAGPCALESKAHALEMAAAL
                     KEITGRAGIGLVYKTSFDKANRTSAKSARGLGLEPALPIFSEIRDKLKVPVLTDVHDA
                     EQCAQLAPVVDVLQIPAFLCRQTDLLVAAAKTGKAINVKKGQFLAPWDMQNVVEKITG
                     AGNRNVLVTERGVSFGYNTLVSDMRALPILKRTAQAPVIFDATHSVQQPGGQGTSSGG
                     EREFVPVLARAATAVGIAGIFIETHQDPDKAPSDGPNMLPLKEMEPLLRALIEFDRLA
                     KR"
BASE COUNT          765 a         1100 c         1060 g          620 t
ORIGIN      
        1 acatcctcga tcggcagcac cgtggtcgcc aggcccgcct gatgcgcgca atcctgaagg
       61 tacgcgatgg tcccggcatc ctccggactg tccatcatgg cggtgagatg gagcggacgg
      121 ctcttgccga tctctgtcca gccctggatc agtcgctcgt gcaacgaatt gaattggtct
      181 gcatctttcg gcagggcttt gcgctcgact gactgctcca gccacatcca ttgaatacgc
      241 cggtctcgag caccgatgtc ggcgtatcgg cgttgtactc cagcagcttt gccggaccgt
      301 cgccgccgta acgcaagtcg aagcggccat agaggctggg ttcggatttc ttccagctgc
      361 gcgcaagcca gttccagaac cgcaccggaa ttgcaaggcg ccgcatcagc cgctcgtccg
      421 cgataattcg cgccaccagt tcgcgggaca tttcctccag ctcggccgtc ggtgcttcga
      481 gatcctgttc gatttcctcg agcgtgaagg catagtaggc ccgctcgtcc caataacgcc
      541 gcccgtcaag ggtatggaag tcgaagccga tctcttcggc gcgcgcgcgc caatccggac
      601 gctcttcgca ggagatgcgc cgcatcagcc gccggacgta tgagcggccg cgatagaatg
      661 gccgatactg ccgaagccgg cgcgcgttcc cggaccgtgc cccaccgatg gcacagacgt
      721 gtggctctgc gacggcgaat gtccgctgta ttcgcgggat tgctgcgggc ttgacgatga
      781 gcctcggctg taggaccggc tggaccaata tgaccggctg gacgacgacg aacgtccgcc
      841 tgactcgcaa ggcgccaatg gcttcgccgg cgcagctcca ggagcaagcg tttgcgggct
      901 gatcgtgcca ggcgtggttg acccgggcgc ggtgcagtcc cgagacggca gcaatgcata
      961 ggctgaagcg cccgcggtcg tcatgcccat caacagaagc gcaacctggg acgatcgctt
     1021 cattgccgca tcatagcgtc atggatgcag cgctcagcag tccggcagta atcgaggaca
     1081 ggccgagcca gatcgccggc gcgacatccc ccgctgcgat ccgattcgaa agatccggca
     1141 ccggaatgcg caccgcatag aaagtaatga tctggacaat gatcgcgacc acgccccaaa
     1201 ccgcgcaatc gaccaggtcg gaagcgtgtg cgatcgcgct ggccaacggc agcgagaagc
     1261 cgaaaagact caatcccagg gcaatggcgg cgcccggtac gttttttcgg atcagttcaa
     1321 attcgttcat tggcgtgatg cgggtgtaga tcagcaagaa cgcgatcacc aacaccgtcg
     1381 ccaggcaaaa atatgcaata aatgccggca acccctgaag agattgcatc accatgattc
     1441 ccgccccctc aactgtgccg gatcatatcg gagtccccgc gcgcgcgaag cgggtgtgca
     1501 gcgatttcaa cggatttcat gactgcctgg ccggcgagtg cttcagacgc aaggcacaga
     1561 tccatcctgt tgccgcgagc accgctgcgc cgaataacaa caccggtgtt gcgccaacgc
     1621 cgctcagccc gagaccgtag acgaccggcc cggctgcgtg accgaggaaa aagaacatag
     1681 aatgcccggc ggtggccgag ccgcgcgcgg ccggagccaa ttccgtcacg tagacctgga
     1741 tgcatccatg cagcaggtag aagccgaagc cgagcagcat gaagtttgca aattcgacag
     1801 gccagggcat gcgcagcgca atcacgacca ggcaaaaacc cataaccatg cccccggcag
     1861 ccataagttg acgttcgcga aaatgatcaa ggagccatcc gaccatgaag gtgtaaatga
     1921 cgccgccaat gccaaaaccg gcgatcacga tgccggcaat cgatgcgcgc gactcgcctt
     1981 cggtgcgcag gaattctgcc atatagggaa acagcccgaa caggaacacg ccttcgagaa
     2041 agaccgcgcc gaaacaatac ttcgccatcg ggttgctgaa gattgcccgg tagtttggaa
     2101 gcaaggtcga caagtcaaaa cgcccggtct tttcgtccat gctgcgaaat ccgggatagg
     2161 caacggccag cgcgatcaga tcgatcgcgc cggttacaaa aaacacgccg cgccacccaa
     2221 acaggtcgcc gatgacgccc gctccggacg ctcccagcag gtttccgctc atggcagcaa
     2281 agagcaggcg gccaatggcc acttgccgct gctgcaccgg aacgcggtcg ccggcgacag
     2341 ccagcgcaat tggaaagacg cctcccgctg taatccccgc aacgacgcgc aatgccatga
     2401 gcgtttcgaa gttcgtcgcg aggccgcatg caagcgtggc aatgccgaca ataagcatgc
     2461 agacggcgat cagccgcgtc ttgctgaaca tatccgcaag cgcaccaagg accggttgaa
     2521 tgagtgcgta aggcagggtg aaaccggttg aaagcatcgc cgcagttgtc ggcgttacac
     2581 tcaaaccttc cgcgatctgc ggaatgacgg gatccaccga gcgcatgaaa agcgtcgtcg
     2641 cgaagacgac gaaggccatc agattgagga cccggcccat gaattggagg ctggccgctc
     2701 agcgcttggc cagccgatcg aattcgatca aggcgcgcaa gagcggctcc atctccttga
     2761 ggggcagcat gttcgggcca tcggaaggcg ccttgtcagg atcctgatgc gtctcgatga
     2821 aaatgcccgc aatcccgacc gccgttgcgg cgcgggcaag aaccggcacg aactcgcgtt
     2881 cgccaccgga cgacgtcccc tgtcctcccg gctgctggac ggagtgtgtg gcgtcgaaaa
     2941 tgacaggtgc ctgtgccgtg cgcttgagga tcggcagcgc gcgcatgtcg gacacgagcg
     3001 tgttgtagcc aaaagacacc ccgcgctctg tcaccaggac atttcggttt cccgcccccg
     3061 ttattttttc gacgacgttt tgcatgtccc acggcgccag gaactggccc ttcttcacgt
     3121 tgattgcttt tccggtcttg gcagcagcaa cgaggagatc ggtctggcgg caaagaaatg
     3181 caggaatttg cagcacgtcc acgaccggcg cgagctgcgc gcactgctct gcatcgtgca
     3241 cgtcggtgag gacgggtacc ttcagcttgt cgcgaatctc ggaaaagatt ggcaaagcag
     3301 gttcgagacc gaggccgcgc gcagatttgg ccgatgttcg attggccttg tcgaacgatg
     3361 ttttataaac aaggccaatc cccgcgcggc cggttatttc cttcagagcg gccgccattt
     3421 ccaatgcgtg cgctttgctt tcaagcgcac agggcccggc aatcagcgcc aacggcagcg
     3481 cgttgccgaa gcgcacgctg ccgaccgaaa cggtggcgtt gggcttttga tccacggctt
     3541 agatc
//
LOCUS       DATDHO010000623         1889 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_278228, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000623 DATDHO010000000
VERSION     DATDHO010000623.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278228"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..736
                     /locus_tag="VIY07_12020"
     CDS             <1..736
                     /locus_tag="VIY07_12020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382515.1"
                     /translation="NVFLHATGIRAEHCAQVVAKNRSNALRNPVAAYPLALTPINVES
                     SSYVSYPLREAEIAQRADGCAVVVLANEKKAQRGQSKPAWVRGVGFANDSGTLESRDW
                     VSADYIRIAAERAYRQASIQNPREAIRLLEVDDTYAYKELQHLIALGFFSDGAEARRF
                     VELGEMKPDGKMPVNVSGGALGMGLPLEASGLYRVVELVLQLRGQAGARQLPDVRLGL
                     AQSWRGVPTTSGAVVILGTEPPNEPT"
     gene            723..>1889
                     /locus_tag="VIY07_12025"
     CDS             723..>1889
                     /locus_tag="VIY07_12025"
                     /inference="COORDINATES: protein motif:HMM:NF004721.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HEY6382516.1"
                     /translation="MSRRKVAVVGAGMTKFMRRALETPKELAWLAAKSALESAEMKLD
                     QIDCVVLGTAPDAFDGLHMKGEYLSDGCGGWKKPYLRCYVGGGTGVYAVAQAWFHVAS
                     GLFDTALVVCEEKMSSCLPHPQAAFLTIFDHITEQPLKPNLLWIFALEQTRYMQTYGI
                     ALEDIARVSVKNKRHALGHPAAQLGADLTIKEVLASEVMAWPVHRLMVSPTSDGAAAV
                     VLAGEAIARRITDRPAWIQGVGWCLDTAYWTNRDLAYPEYVEKAAWMAYRMAGIREPR
                     KEINVAEPYDPFAYKELHHLEGLQLAPKGQAPKLLADGVFERNGDLPVTPSGGLLGVG
                     NPIAAAGLMKICELFWQLRGEAGNRQVPGKPERGVAQAWGDLMQVGTVVVMGTKE"
BASE COUNT          403 a          527 c          587 g          372 t
ORIGIN      
        1 gaacgttttc ttgcacgcca ccgggattcg cgccgagcac tgcgctcaag tggtagcgaa
       61 aaaccgcagc aacgccttgc gcaacccggt agcggcgtac ccgctggcgc tgacgcccat
      121 aaatgtagaa tcatcttctt acgtttccta tcccctgcgc gaagcggaga tcgcgcagag
      181 agcggacggc tgcgcggttg ttgtcttggc caacgaaaaa aaagcgcaaa gaggtcagtc
      241 aaagcccgcc tgggtccgcg gcgtcgggtt tgccaatgac agcgggacgt tagaatcacg
      301 cgattgggta agcgcggact atattcgcat cgcagcggaa agagcctacc gccaagcctc
      361 gattcagaac ccgcgggagg cgatccgact cctcgaggtc gacgatacct atgcgtacaa
      421 agaactgcag catctcatcg ccttgggctt tttctccgac ggagctgagg cgaggcgatt
      481 cgtagaacta ggcgagatga agcccgacgg caagatgcca gtcaatgttt ccggtggagc
      541 tttgggtatg ggcctgccat tagaggccag tggactctac cgggttgttg agcttgtcct
      601 gcaactgcgg gggcaggcag gcgcacgtca actgccggat gtccggctcg gactagcgca
      661 atcctggcgc ggtgtcccga cgacgagcgg tgccgtcgtc attcttggta cggagccacc
      721 aaatgagccg acgtaaagtc gctgtcgtag gagcgggaat gaccaaattc atgcgccggg
      781 cccttgagac tccgaaagaa ctagcgtggc tggcggccaa gtccgctctg gagtcggccg
      841 agatgaaatt ggaccagatc gactgtgtcg tcctcggcac cgcgccggat gccttcgacg
      901 ggctacacat gaaaggcgaa tatctttcgg atggctgcgg cggttggaag aaaccttatc
      961 ttcgctgcta tgtcggtggg ggcaccggcg tctacgcggt tgcgcaagcc tggtttcacg
     1021 tcgcctcggg cctgttcgat acggcgctgg tggtatgcga ggagaaaatg tcaagctgcc
     1081 ttccccatcc tcaagcagct tttcttacga tctttgatca catcaccgag caacctctga
     1141 agccgaattt gctctggatc tttgccctcg aacaaacccg ttacatgcaa acctatggga
     1201 ttgcgctcga agatatcgcc cgcgtctcgg tcaaaaacaa acgccatgcc ttaggccacc
     1261 cggcggctca gctcggcgcg gatctcacta ttaaagaagt attggcgtct gaagtcatgg
     1321 cgtggcctgt acaccggttg atggtcagtc caacgagcga tggcgccgcg gcggtggttc
     1381 tcgccggaga agcaatcgcc cggcgcatca ccgacaggcc cgcctggatc caaggcgtgg
     1441 ggtggtgctt ggataccgcc tattggacga atcgcgatct tgcctatccc gagtatgtgg
     1501 aaaaggccgc gtggatggcc taccggatgg ctggaattcg cgaaccgaga aaagagatca
     1561 acgtcgccga accctatgac ccgttcgcct acaaagaact ccaccacctg gaagggctgc
     1621 aattggcacc gaagggacag gcacccaagc tcttggccga cggtgttttt gagcgcaatg
     1681 gtgatttgcc ggtgacacct tccggtggcc tgctcggcgt gggaaaccca attgctgccg
     1741 caggtctcat gaagatctgc gagctatttt ggcagctgag aggtgaggcg ggaaaccggc
     1801 aagtgcctgg caaaccggag cgcggcgtgg cccaggcatg gggcgatctg atgcaggtag
     1861 gaaccgtcgt tgtcatggga acgaaggag
//
LOCUS       DATDHO010000624         1647 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_278349, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000624 DATDHO010000000
VERSION     DATDHO010000624.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1647)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1647)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1647
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_278349"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VIY07_12030"
     CDS             <1..227
                     /locus_tag="VIY07_12030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382517.1"
                     /translation="GWLLADAMFPPAATATGTQQPTPPRKPKKKNVASGRDFDIPPSG
                     EMRFVDNELLLEFSISAAPAFATRSRARCN"
     gene            423..1238
                     /locus_tag="VIY07_12035"
     CDS             423..1238
                     /locus_tag="VIY07_12035"
                     /inference="COORDINATES: protein motif:HMM:NF012311.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEY6382518.1"
                     /translation="MPLHSTWCRFNQVQLAHRINKGDDVLVAVIDSRIDRGHPDLAGV
                     IVDEFDAIGTPGAAHSHGTAIAGAIAANSKLVGVAPKVRLLAVRAFSGSGESAQSTTF
                     NILKGLDWAASRNARIVNMSFAGPPDPMLQEMLLRANARGIVLIAAVGNAGPKSPPLY
                     PAADAAVIGVTATDAADRLMPQANRGPQVSVAAPGVEIMAAAPNGAYQVTSGTSIAAA
                     HASGVAALLLAVKPKLSPAQVRGNLTRAAHRIPGKRNDVGAGVIDALAVLNSK"
     gene            1282..>1647
                     /locus_tag="VIY07_12040"
     CDS             1282..>1647
                     /locus_tag="VIY07_12040"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HEY6382519.1"
                     /translation="MAVSESLIVERPSDDIVVLRINRPQVRNALNLEVRAGLAEKITQ
                     YGAEKAVRCLIVTGSDAAFAAGADIGEMAEADPVEVMSRNVQKYWRAIMDCPKPLIAA
                     VEGYALGGGLELALCADIII"
BASE COUNT          311 a          489 c          523 g          324 t
ORIGIN      
        1 taggctggct tttggccgat gcgatgtttc cgcctgccgc gacagccacg ggtacccagc
       61 agccgacacc gccacgcaag ccaaagaaga aaaatgtcgc aagtggacgc gatttcgata
      121 ttccgccctc gggtgaaatg cgttttgttg acaatgaact tttgcttgaa ttttcaatca
      181 gcgcggcgcc ggcattcgcg acgcgctcgc gcgcacgttg caactgacgc aactggagac
      241 gcaaggtttc agcctaaccg ggcggaccat cagccgctgg cgcatcgatg gtggccgttc
      301 tgttgccgat actttgcgct tgatacggcg ggatttcccg ggcgtcacgg ccggccaggc
      361 taacaagctc tacgtcggag cgcagaccga gcctgcgatc aaaccggacg cggtaccaga
      421 cggtgccgct gcacagtacg tggtgccgct tcaatcaggt tcagcttgcg caccgcatca
      481 acaaaggcga tgacgtgctg gttgcggtga tcgactccag gatcgatcgt ggtcatccgg
      541 atctcgccgg tgtcatcgtg gacgaatttg atgcgatcgg gacgccgggg gcggcccact
      601 cgcatggcac ggcaattgcc ggggcaatcg ctgcaaacag caaactggtc ggcgttgcgc
      661 cgaaggtcag gcttctggcg gttcgcgctt tttcgggcag cggagaaagc gcgcaaagca
      721 cgactttcaa tatcctcaag ggccttgatt gggcggcgag cagaaacgct cgcatcgtca
      781 atatgagttt tgctggccct ccggacccga tgctgcagga gatgctgctc cgggccaatg
      841 cgcggggcat cgtgctgatt gcagcggtcg gcaatgccgg tcccaagtcg ccaccgctgt
      901 atcctgccgc cgatgctgcg gtcataggcg tgaccgcgac cgacgcggca gacaggttga
      961 tgccgcaggc caaccgggga ccgcaggttt cagtagctgc ccccggggtt gagatcatgg
     1021 cggctgcgcc gaacggcgcc tatcaggtca cttccggcac ctcgattgct gccgcccatg
     1081 ccagtggcgt ggcggcgctg ttgctggctg ttaagccgaa gctttctcct gcccaggtgc
     1141 gcggcaatct gacccgggct gcccaccgca ttccgggcaa gcgcaatgac gtcggagcgg
     1201 gagtcatcga tgcactcgct gtgctaaatt ccaaatagcc cgcaaggcag cgtcaaaacc
     1261 aagtgttctg gatcgatctc catggccgtg tcggaatccc tgatcgtcga gcgtccgtca
     1321 gacgatatcg tcgttttgcg gatcaatcgt ccgcaggtgc ggaacgcgct caacctcgag
     1381 gtgcgcgcgg gccttgccga gaaaatcacg caatacggcg cggagaaagc cgttcgctgc
     1441 ctcatcgtaa ccggatccga tgctgctttt gccgcgggcg ccgatattgg ggagatggcg
     1501 gaagccgatc cggtcgaggt gatgtcgcgc aatgtgcaga aatactggcg cgcgatcatg
     1561 gactgtccca aaccgttgat cgcggccgtc gagggctatg cactcggcgg cgggcttgag
     1621 ctcgcattgt gtgctgacat catcatt
//
LOCUS       DATDHO010000625         1593 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_178825, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000625 DATDHO010000000
VERSION     DATDHO010000625.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178825"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1496)
                     /locus_tag="VIY07_12045"
     CDS             complement(<1..1496)
                     /locus_tag="VIY07_12045"
                     /inference="COORDINATES: protein motif:HMM:NF018597.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HEY6382520.1"
                     /translation="MPRKNALAYRLSGQFLRYCWLRQMRTYSIRISVRPWLTAVAVMA
                     VAASACVTAQAQSSGDFIQLSRSHLRSDKYRKNTFDPLSGEQKRRKAHRRSDSSRASP
                     RSNAKTQSKRATSKGAAGPATAGVANVPLPRPRPAFWPEPRSFAEAAGPGFDTASVTS
                     ALSDCDQRLTEIAAIELLPRLIGPGECGGGDMIRLNAVLLPNHKRVEVKPTAVLRCAT
                     AESFAAWVRDEASNHVAALGDALRSVDSYGSYECRGRNWVVDAKVSEHGKGNAIDLRA
                     LVLADGRHIRLTDETNSKPVRENLRESACHRFTTVLGPGADSHHNDHIHLDSLERNGG
                     ARICQWDVREPPPPAKIARGPVRLAARSAALPQPRPSEIQTVTAGPWAIRPTYKATKL
                     QSCSMSRSDGDLGISFVRAQDGLLLILESKKWKLDRGKSYPVRLTAGSRSVNAKATAE
                     IKSVSITLADSKFNSRLRSANNLQLHAEGTTLRVPLDSSSVAFERLQE"
BASE COUNT          311 a          474 c          473 g          335 t
ORIGIN      
        1 cattcttgaa gacgttcaaa tgctaccgaa ctgctgtcga gcggcacccg cagcgtagtg
       61 ccctcggcgt gcagctgaag gttatttgcc gatcgaagcc ttgaattgaa cttgctatcg
      121 gccagcgtga tgctcacact tttgatttcc gccgtcgcct tggcgttcac ggatcgcgag
      181 cctgccgtca gacgaacagg ataagacttg cctcgatcaa gcttccactt cttcgactcg
      241 aggatgagca acagcccatc ttgagcacgc acgaagctta ttccgaggtc gccatcggaa
      301 cggctcatgc tgcagctttg caacttggtt gccttgtagg tgggtcggat tgcccagggg
      361 cctgcggtga ccgtctggat ttctgatggc cggggctgag ggagtgccgc cgacctggcg
      421 gccagccgaa cgggcccgcg cgcgatttta gccggaggcg gtggctcgcg cacgtcccat
      481 tggcaaatac gggcgccgcc atttcgctcg aggctgtcga gatggatgtg gtcattgtgg
      541 tggctgtcag cgccgggtcc cagcactgtc gtaaagcgat gacaagcgga ttctcgcaaa
      601 ttttcgcgaa ccggctttga atttgtctcg tcagtgagcc tgatgtggcg accatccgcc
      661 agaaccaagg cacgaaggtc gatggcattg cctttgccgt gttcgctgac cttggcatcg
      721 acaacccagt ttcgaccgcg gcactcgtat gaaccgtagc tatcgacgct gcgcagcgcg
      781 tcccccagcg cggcaacgtg attggaagcc tcgtcccgca cccaggcagc aaaagactcc
      841 gccgtcgcgc agcgtaaaac cgctgtcggc ttgacctcga cacgtttgtg gttgggcagc
      901 aggaccgcgt tcaacctaat catatcgccg ccgccgcatt cgcccgggcc gatgagcctc
      961 ggcaacaact cgatagcagc gatttccgtc agtcgctgat cacaatcgct caatgcactg
     1021 gtgacactcg ccgtgtcgaa accggggcct gccgcttcag caaaggagcg cggttccggc
     1081 cagaatgccg gccgcggtcg cggcaacggg acgtttgcaa cgccggcagt cgcaggtcca
     1141 gcggcccctt tcgaagtggc gcgcttgctc tgcgtcttcg cgttactgcg cggcgacgcc
     1201 cgcgagctgt cgctgcgacg atgcgctttt cgccgtttct gctccccact aagtgggtcg
     1261 aacgtgtttt tgcgatattt gtcagaccgc agatgagatc ggctaagctg aataaagtcc
     1321 ccagaggatt gtgcctgagc agtcacgcac gcggatgccg ccaccgccat aacggcgacg
     1381 gccgtgagcc agggccggac gctgatgcga attgaatatg ttctcatctg ccggagccaa
     1441 cagtaccgca ggaactgacc agaaagtcgg taagcaagcg cgttttttct tggcatatgt
     1501 caaaatttaa tcccgctaga tgccgacgaa agttgcttag cgagggaacg tcggaacaaa
     1561 aacggcagtt gccgccatga gttgctgttc cat
//
LOCUS       DATDHO010000626         3230 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_75715, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000626 DATDHO010000000
VERSION     DATDHO010000626.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3230
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75715"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            70..951
                     /locus_tag="VIY07_12050"
     CDS             70..951
                     /locus_tag="VIY07_12050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEY6382521.1"
                     /translation="MSSLSGKSGPRYRHVTDESKPYETIRVDKLTPIIGAEIDGVDLA
                     KSLSNRMVDEIHRALAENIVIFFREQHITPQQHLAFGRLFGELHVHPAAPHEPGQPAL
                     MKIYADKNSSRANGEGWHSDVSCDLEPPMGSILYIRQCPPHGGDTLFASMYAAYDALS
                     DRMKTYLHGLTAIHDGEPVYRGLYASAGVADKPAYPRAEHPVIRTHPVTGKKALYVNR
                     GFTSHIVGIPRDESDAVLSYLYQHAENPLFQCRFRWTENAIAFWDNRCSQHRAMWDYW
                     PHTRSGTRVTVKGERPF"
     gene            complement(968..2575)
                     /locus_tag="VIY07_12055"
     CDS             complement(968..2575)
                     /locus_tag="VIY07_12055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006885 - regulation of pH [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HEY6382522.1"
                     /translation="MTESLQTLLLMLGLLAAVAVAAKRLNVAPSILLVIAGIGIAFVP
                     GLPRIELAPEVVLLVILPPLIYSAGVAMSWRDFRFNLRPITLLAFGCVVFTTCAIAVA
                     AHYVLKFDWPIAFLLGAIIAPPDVVAPLAVARRLGLPRRLLVVLEGEGLANDATALIL
                     YRFAVAAAVTGAFSFQKAAGTFALIVVGEILYGIAIGWLSLRLRQWARDPRVEITLSL
                     MTPYVAFWVPEHLGGSGVLATVACGLYVSWIGPRLISSATRLQGIFFWDLLVYLIEGF
                     VFLVTGLQVRALLEEAQFVPIRELVIATLLTTLIAIAARFIWVFPATYIPRWVSSSLA
                     RRDPSPPWQQPFLLAFTGVRGVVSLAAALAIPFTLNNGQPFPHRGLILFVTFGVIVLT
                     LVGLGSMLPLVVRWLGVTHIGRQEHADEIKAELNARVAALDEIEKRLETFIEQRELPE
                     DVIALLRTRNQSRRQILPSDLEDGLDNTRQGAALKQELIDAERDFIFQLLRDGKITDE
                     ARRRIEYELDLEEASVANRGKAGGGWI"
     gene            complement(2572..>3230)
                     /locus_tag="VIY07_12060"
     CDS             complement(2572..>3230)
                     /locus_tag="VIY07_12060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008138902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1345 domain-containing protein"
                     /protein_id="HEY6382523.1"
                     /translation="LSLPVRMIKLHAKLAVAILVGIAVAFAVAPFIPQWGTRILAGWD
                     AGVVVYLVSTLCMMWRADVERIRRRASEQDEGAAFILALSIIATFASLVAVVVALGGA
                     KQGTHGSLAVNVALAFCTILLSLAFVHTIFSFHYAHEYYGERGDGKIGGLHFPGDHAP
                     DYRDFLYFSLVIGMTFQVSDVSITSKVIRRVASVHGVLSFFFNLVVLALTVNMVANLI
                     "
BASE COUNT          745 a          984 c          969 g          532 t
ORIGIN      
        1 cggagtaggc gaacaggttg cgcgcggcgc tgccagcgct accatccccg gtagatccga
       61 aggtgcccca tgagctcgtt aagcggcaag tccggcccgc gctatcggca cgtcacggat
      121 gagtccaagc cttacgagac gatccgcgtc gacaagctca cgccgatcat cggggcggag
      181 attgatggcg tcgacctggc aaagtcattg tcgaaccgga tggtggatga aatccatcgt
      241 gcgctggccg agaacatcgt catctttttc cgtgagcagc acatcacgcc acagcagcat
      301 cttgcctttg gacggctgtt cggcgagctg cacgtccatc ccgccgcgcc gcacgagccg
      361 ggccaaccgg cgctgatgaa aatctatgcc gacaagaaca gttccagagc aaatggcgag
      421 ggctggcaca gtgatgtgtc atgcgatctc gagccgccga tgggcagcat tctctacatc
      481 aggcaatgcc cgccgcacgg cggcgatacc ttgttcgcca gcatgtacgc agcctatgac
      541 gccttgtctg atcgcatgaa gacctatctc cacggcttga ccgccatcca cgacggtgaa
      601 cccgtgtatc gcggtcttta tgcgagtgcc ggcgttgcgg acaagccagc ctatccacgc
      661 gccgaacatc cggtgatcag gacgcatccg gtaaccggga aaaaagcgct ctacgtgaat
      721 cgcggtttca ccagccatat cgtcggcatt ccacgcgatg agagcgatgc tgtgctgtcg
      781 tacctttacc agcacgcgga aaatccgctg ttccaatgcc gtttccgatg gaccgaaaat
      841 gcgatcgcat tctgggacaa tcgttgttcg cagcaccgcg cgatgtggga ctactggccg
      901 cacacgcgct cgggcactcg cgtgacggtg aaaggcgagc gtccgttctg actcagaaaa
      961 tccgatgcta aatccagccg ccgccggcct tgccgcggtt ggcgacgctc gcttcttcca
     1021 ggtccaactc gtattcgatg cgacgacgag cttcgtcggt gatcttgccg tcgcgcagca
     1081 actgaaaaat aaaatcgcgc tcggcatcga tcagctcttg cttcaacgcg gcgccctggc
     1141 gcgtattgtc gagaccgtct tctaggtcac tcggcaggat ttgccttcgg ctctggttgc
     1201 gcgtgcgcag gagagcgatg acgtcctcag gcagttcgcg ttgttcaatg aaagtctcaa
     1261 ggcgcttctc tatctcgtcc agagcggcaa cgcgagcgtt caactcggcc ttgatttcgt
     1321 ccgcgtgctc ctgccgaccg atgtgggtca cgccgagcca ccgcaccacc agcggaagca
     1381 tcgaacccag gccaacaagc gtgaggacga tcacgccgaa ggttacaaaa agaattagcc
     1441 cacgatgtgg aaatggctga ccgttgttga gcgtgaaggg gatggcgagt gcggcggcaa
     1501 gcgaaacgac gccgcgaacg ccagtgaaag cgagcaagaa cggctgctgc catggcggcg
     1561 acggatcgcg cctggccagt gatgaactca cccagcgtgg aatataagtc gccgggaata
     1621 cccagatgaa gcgcgccgcg atcgcgatca gcgtcgtcaa cagggtggcg atcactagtt
     1681 cgcggatcgg tacgaattgc gcctcctcca gcagcgcgcg cacctgcaag cccgtgacaa
     1741 gaaatacgaa accctcgatg agatagacca gaagatccca gaagaagatg ccttgcagcc
     1801 gcgttgccga agaaatcagc cgcggcccga tccagcttac gtaaagaccg cacgcgaccg
     1861 tggccagcac gcccgagccg ccgagatgct cgggcaccca gaacgcgaca tagggcgtca
     1921 tcagggagag ggttatttcc acacgcgggt cgcgcgccca ttgccgcaaa cgcaggctca
     1981 accagccgat cgcgatgcca tacaggattt cgccgacgac gatgagggca aacgtgccgg
     2041 cggctttctg aaacgagaac gcgccggtca cggcggcggc gaccgcaaaa cggtagagga
     2101 tcaacgcagt cgcgtcgttg gcgagccctt caccttccag aaccacgaga agccgccgcg
     2161 gcaagcccag gcgtcgcgca acggccagcg gtgcgaccac gtcaggcggc gcaatgatgg
     2221 cgccgagcag aaaagcgatc ggccaatcga atttgagcac ataatgggcc gccaccgcga
     2281 tcgcgcaggt agtgaacacc acgcagccga aggcaagcag cgtgatcggg cgcagattga
     2341 agcgaaagtc gcgccagctc atggcgacgc cggcggaata gatcagcggc ggcaagatca
     2401 ccagcaacac gacttcaggc gccagttcga tcctcggcag gcctggaacg aaggcgatgc
     2461 caattccggc aatcaccagc aggatcgaag gggcgacgtt cagtctctta gcggcgactg
     2521 cgaccgccgc cagcagtccc agcatcaaca gcagcgtctg gagggactcc gtcatatgag
     2581 gttggccacc atgttcacgg taagcgccag gacaacgaga ttgaagaaga acgacaagac
     2641 gccatgcacc gaagcaacgc ggcgaatgac cttgctggtg atcgagacgt cggagacttg
     2701 aaaggtcatg ccgataacca gcgaaaagta gaggaaatcc cgatagtcag gtgcgtggtc
     2761 gcccggaaaa tgcaacccgc cgatcttacc gtcgcctctt tcgccgtaat attcatgcgc
     2821 atagtggaac gaaaatatcg tgtgcacgaa cgccaatgac agcaggatgg tgcagaaagc
     2881 cagtgcgaca ttcaccgcca gactgccgtg agttccttgt ttggcaccac cgagggcaac
     2941 gacgacggcc acaaggctgg cgaatgtggc aatgatcgaa agcgcgagga taaacgcagc
     3001 gccctcgtct tgctccgacg ctcggcgccg gatgcgctcg acgtcggcgc gccacatcat
     3061 gcaaagcgtc gaaaccaggt agaccacgac gcccgcgtcc cacccggcca gaatgcgtgt
     3121 tccccattgc ggaatgaacg gcgccactgc aaaagctaca gcgatgccga cgaggatcgc
     3181 gactgccagc ttggcatgca gtttgatcat gcgcaccggc agcgacaggg
//
LOCUS       DATDHO010000627         2038 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_227977, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000627 DATDHO010000000
VERSION     DATDHO010000627.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2038)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2038)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2038
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_227977"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..978)
                     /locus_tag="VIY07_12065"
     CDS             complement(<1..978)
                     /locus_tag="VIY07_12065"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6382524.1"
                     /translation="MSEERIVPDTAEFVSAASRATVFWTNVFQSLLVAAVVLWVLDIP
                     RMAGLSLYTEQLLTICLGLTLALAFVVETARKRHWSDWPAVVLSLAVCGYITVRYEHL
                     TLEASMMPLDSLLISIVLVALIFEASRRVSGWGFVGMILAIAVYIYISPHLPGDFQTR
                     YVSPQRLVTYVALDLNGAIGSILQVAVLIVIPFTILGQVLARTGGADFFADVSMSLMG
                     RFRGGAAKIAVVGSALFGMISGSAVANVLAVGIVTIPTMIRSGFTPYRAAAIESVGST
                     GGQMTPPVMGAAAFIMAEFLQVPYGEVCIAAAIPAFLYYSCLFFHVDLEA"
     gene            complement(998..1948)
                     /locus_tag="VIY07_12070"
     CDS             complement(998..1948)
                     /locus_tag="VIY07_12070"
                     /inference="COORDINATES: protein motif:HMM:TIGR02122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY6382525.1"
                     /translation="MPQSRLAVFRPITVAIGFVSILLGAHVAAAQTYGFATMQPGTLN
                     HTSGSAVAKVLKEKANLNVVVQPTAGESVLIPLISRGEAEFGIANIFEVVAAKQSAPD
                     IRLIGSLHPLRGAFWVRKDTDMRTMADLKRKKVGMGYSAMKTIDPMVRAILATGGLTE
                     KDVTPVLIPNVIRGADDFVSGQADMFFFAFGAPKVREVDVTVGGIRALEIPASGIAAA
                     RKILPEGYLTPAQPNPFFIGVEKPMDVYTWDNMIFTNAKVKDDVVYKIIETLEANKAE
                     LVTVQPALREFSAAALYKKYDLPYHPGALKYFKDNNIAAK"
BASE COUNT          404 a          618 c          652 g          364 t
ORIGIN      
        1 ggcttcgagg tcgacgtgaa agaacaggca cgagtagtaa agaaacgcgg ggatcgccgc
       61 agcgatgcat acttcgccat aaggcacctg aagaaattcg gccatgatga acgccgcggc
      121 gcccatgact ggtggcgtca tctggccgcc ggtggaccca accgactcga ttgcggcagc
      181 gcgatatggg gtaaagccgg agcggatcat cgtagggatt gtcacgatcc cgactgcaag
      241 cacattggcg accgcgcttc cggagatcat gccgaacaag gccgagccga ccaccgcgat
      301 tttcgccgcg ccgccacgga agcggcccat cagcgacatc gagacatcgg cgaagaagtc
      361 tgccccgccg gtgcgtgcca gcacctggcc aaggatcgtg aagggaatga cgatcagcac
      421 cgcgacctgg aggatcgagc caatggcgcc gttgagatcg agcgcgacat aggtgacgag
      481 gcgttgtggc gagacgtaac gggtctggaa atcccccggc agatgcgggc tgatgtagat
      541 gtagactgcg atcgcgagga tcatgccgac gaagccccag ccgctgaccc ggcggctcgc
      601 ttcgaagatc aaggcgacca gaacgatgct gatgagaagg ctgtcgagtg gcatcatcga
      661 agcttcaagc gtcaagtgct cgtagcgcac cgtaatgtag ccgcacacgg cgagcgacag
      721 gaccaccgcc ggccagtccg accagtgacg cttgcgtgcc gtctcgacga cgaaggcgag
      781 cgccagcgtc aggccaaggc agatcgtcag caattgctcg gtgtagagcg acagccccgc
      841 catgcgcggg atgtcgagca cccacaggac caccgccgcg accagcagcg actggaaaac
      901 gttggtccag aagacggtcg cccgcgacgc agccgagacg aactcggctg tgtcgggaac
      961 gatgcgttct tcgctcaccc tttactcacc cggctgttta tttggcggca atgttattgt
     1021 ccttgaagta tttcaaggcg ccggggtgat agggcaggtc gtatttcttg tagagtgccg
     1081 ccgccgagaa ctcgcgcaat gccggctgga cggtaaccag ctcggccttg ttggcctcca
     1141 gcgtctcgat gatcttgtag acgacatcgt ccttcacctt ggcgttggtg aagatcatgt
     1201 tgtcccacgt gtagacatcc atcggctttt cgacgccgat gaagaacggg ttgggctgtg
     1261 ccggcgtcaa gtagccttcc ggcaggatct tccgcgccgc cgcgatgccg ctcgcgggga
     1321 tctcgagcgc gcgaatcccg ccgacagtga cgtccacctc gcgtaccttc ggcgcgccga
     1381 acgcgaagaa gaacatgtcg gcttgcccgg agacgaaatc atcagcgccg cggatcacgt
     1441 tggggatcag cactggcgtg acatctttct cggtgaggcc gccggtcgcc aggatcgccc
     1501 ggaccatcgg atcgatcgtc ttcatcgcgg aatagcccat gccgaccttc ttgcgcttga
     1561 ggtcggccat ggtgcgcatg tcggtgtcct tgcgcaccca gaacgcgccg cgcaacggat
     1621 gcagcgagcc gatcaagcgg atgtccggcg cgctttgctt ggcggcgacc acctcgaaga
     1681 tgttggcgat gccgaactcg gcttcaccgc ggctgatcaa cgggatcagg accgactcgc
     1741 ccgcggtcgg ctgcaccacg acgttgaggt tggccttttc cttcagcacc ttggcgaccg
     1801 ccgaaccgga cgtgtggttg agcgtccccg gctgcatggt ggcaaagccg taggtttgcg
     1861 cggcggcgac gtgcgcgccg agcaggatcg agacgaaacc gatggcgacg gtaatcggtc
     1921 ggaaaaccgc cagtcgtgac tgaggcattt gctccctccc tgattgttct cgttttggat
     1981 taccgccgcg ccgttcgagc ggtgcagtcc ggcttgccct cgaaccaatt ttgcacag
//
LOCUS       DATDHO010000628         2883 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_178957, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000628 DATDHO010000000
VERSION     DATDHO010000628.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178957"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..644)
                     /locus_tag="VIY07_12075"
     CDS             complement(<1..644)
                     /locus_tag="VIY07_12075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382526.1"
                     /translation="MLNSRASLVVVALSLVLLPFVLDFVGLPLRSAIDVVAFAIACMG
                     LNILVGNTGLVSFGHGAWFGLGAYAAALSQRYWFAGSVILPSLFAIAFVAAAAVLSGA
                     LILRRRGVYFSLLTLALTALLFAIGYRWTEFTGGESGLGGVTRATVLGFDLERDSNYY
                     WVVAALAMAVCFLLWRFHRSPVGSVLVAIRENEQRARFIGYPTNRYKLIGFVLSA"
     gene            complement(650..1525)
                     /locus_tag="VIY07_12080"
     CDS             complement(650..1525)
                     /locus_tag="VIY07_12080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382527.1"
                     /translation="MQYVFVLEQVLNGLLVGAYYLLIALGLSLIFALGGIVNLAHGGF
                     YAIGAYLAVLLTDRVGFFGALVVSPVLVGCLGILIERFLFRRFYRSDPILSLLLTFGL
                     AMVIEQGLRIVFGATPLPFSIPSELRGQLLVGDFIYPRYRLFIFGIALAAVTATWFIV
                     YRTTFGRVVRAGVQNPDIVGALGISLAPYMTAIAALGVGLAGLAGVLLAPIAGVHPAM
                     GAEILTAAFVVVVIGGLGSFWGVIAAATLVGVVRGITIYFNPSWGEASMYLLMALVLL
                     VRPRGLFGERIEKFE"
     gene            complement(1605..2846)
                     /locus_tag="VIY07_12085"
     CDS             complement(1605..2846)
                     /locus_tag="VIY07_12085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382528.1"
                     /translation="MITKVSRRTLLKSTAGSALLAAVGMPAIVRAQADAIRIGHLTPL
                     TGFLGPLGEYAVMGVKLAAEEINAGGGVMGRKIDLVMEDSVNPQTASAKAERLIERDK
                     VAMIIGEISSASGLAIGQVANRMKTVFINTGCNSDALRGTSCNPYMFHIEGANSMYVM
                     AVGQYLLRENMVKGKKWYSLTADYAFGHDLLRVAKKFMETNGGQFAADELVPTDATDF
                     SPYLLKIRQSQPDLVVSNLAGNQITNFIKQYSEYGLKFPVAGFGFDTVVAWGAGKGNF
                     SGIWPLVWHHLVDTPSSKKYVDTFQKKYGKLPDNQSWGDYNSLKIVAQSMNEIKSADP
                     QKLAEHLRKGAKFDVMKGREAYFRPYDNQMVMEMYAVRAKDPSKMKDQWDIYDALGAV
                     PGPNDDLETIAPPKDGVCKIG"
BASE COUNT          673 a          872 c          833 g          505 t
ORIGIN      
        1 gccgacagca caaaaccgat cagtttgtag cgatttgtcg gatagccaat aaagcgtgcg
       61 cgctgttcat tttcgcggat tgccacgagc acgctgccca ccggtgaccg atgaaaacgc
      121 cagagcagga aacagacagc catcgcgagc gcagcaacta cccaataata gttgctgtcg
      181 cgctcgagat cgaaacccag caccgttgcg cgcgtgacgc cgccgagtcc gctttcgccg
      241 cccgtaaact cggtccagcg atagccgatg gcaaaaagca gcgctgtcag agccagcgtc
      301 agcaatgaaa aatacacgcc acggcgacgg aggattagtg cgccagacag cacagcagcc
      361 gccgccacga aagcgattgc gaacagtgag gggagaatga ccgagccggc aaaccagtag
      421 cgctggctca gagccgcggc ataggcgccg agcccgaacc aggcgccatg tccgaatgaa
      481 acgagacctg tattgccgac gagaatattg aggcccatgc acgcaatggc gaacgccaca
      541 acgtcgatgg cagagcgcaa cgggaggccc acaaagtcga gcacaaatgg aagcagcacc
      601 agcgacagcg cgacgacgac gagggatgcg cggctgttca gcaccgtcac tactcgaatt
      661 tctcgatgcg ttcgccgaac agcccgcgtg gccgcaccaa aagcacaagc gccatcaaga
      721 gatacatcga cgcctcgccc catgacgggt tgaaatagat ggtaattccg cgcacgacgc
      781 cgacgagcgt agccgcagcg atcacgcccc agaacgaacc caggcccccg atgaccacga
      841 caacgaaagc tgccgtaaga atttccgcgc ccatcgccgg atgtacgccc gcaatcggcg
      901 cgagcagaac gccggcgagt ccggcgagcc cgacgccgag cgccgcgatt gcagtcatgt
      961 acggcgcgag cgaaatgcca agcgcgccga caatgtcggg gttttgcacg cccgcccgca
     1021 ccacacgacc gaacgtggtt cggtagacaa tgaaccaggt cgcggtgacc gccgcgagtg
     1081 ctatgccgaa aatgaagagc cggtagcgcg gataaatgaa gtcgcctacc agcaactggc
     1141 cacgcaattc cgacggtatc gaaaacggaa gcggcgtggc gccgaagacg atgcggagcc
     1201 cctgctcgat gaccatcgcc aatccgaacg tcagcagcag gcttaaaatc gggtcggagc
     1261 gatagaagcg gcgaaacagg aaccgttcaa tcaggattcc gagacaaccg accaggaccg
     1321 gagaaacgac aagcgcgccg aagaaaccta cgcgatcggt caggagcacg gcgaggtagg
     1381 cgccgatggc atagaatccg ccgtgcgcga ggttgacgat gccgccaagc gcaaaaatca
     1441 gcgagaggcc aagcgcgatc agcaggtaat acgcgccgac gaggagccca ttcagaacct
     1501 gctcgaggac aaaaacatat tgcacgcgga agactcggcg ctcaagaact ccaaccaggt
     1561 ccggatgtca tcaaacggca tccggaccgc gttagttcaa aggatcaccc gatcttgcag
     1621 acgccatcct ttggcggagc aattgtctcc aggtcatcgt tcggaccggg cacggccccc
     1681 agggcgtcat agatatccca ttggtccttc atcttgctgg ggtctttcgc ccgcaccgcg
     1741 tacatctcca tgaccatctg attgtcatag ggacggaaat aggcctcgcg ccccttcatc
     1801 acgtcgaact tcgcgccctt gcgcagatgc tcggccagct tctgagggtc cgccgattta
     1861 atctcgttca tcgattgcgc gacgattttc agcgagttgt agtcgcccca ggactggttg
     1921 tcgggaagct tgccgtattt cttctggaac gtatcgacgt atttcttcga gctcggcgtg
     1981 tcgaccaggt gatgccacac gagcggccag atccccgaga agttgccctt gccggcgccc
     2041 caggcgacga ccgtatcgaa gccgaagcct gcgacaggaa atttcagacc gtattcggag
     2101 tattgcttga tgaagttcgt gatctggttg ccggcgaggt tcgacaccac gagatcgggt
     2161 tgagattgtc ggatcttcag caggtacggg ctaaaatccg tcgcgtcggt cggaacgagc
     2221 tcatcggctg cgaactggcc gccgttcgtc tccatgaatt tcttcgctac gcggagaagg
     2281 tcgtgaccga atgcgtaatc tgcagtgagc gaataccatt ttttgccctt caccatgttt
     2341 tcgcgcagca gatactgacc gaccgccatg acgtacatcg agttcgcgcc ctcgatgtgg
     2401 aacatgtatg ggttgcagct cgtgccgcgc agcgcgtcgg aattgcatcc ggtgttgatg
     2461 aacaccgtct tcattctgtt cgcgacctgg ccgatcgcga gaccggaggc cgacgaaatc
     2521 tcgccgatga tcattgcgac cttgtcgcgt tcgataagcc gctcggcttt ggcggaggcg
     2581 gtctggggat tgacggagtc ttccatgaca agatcgatct tgcggcccat gaccccgccg
     2641 cccgcattga tctcttccgc agccaacttg acgcccatga ctgcatattc gccaagcgga
     2701 ccaagaaaac ctgtcagcgg cgtcagatgc ccgatacgaa tcgcatcggc ctgcgccctg
     2761 acgattgccg gcatgccgac tgcagcgagc agcgcggagc cggctgtact tttcagcaat
     2821 gtccgacgcg atactttggt aatcatgaca attccttccc ttgagctttt tgcgcggtct
     2881 gct
//
LOCUS       DATDHO010000629         1749 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_129736, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000629 DATDHO010000000
VERSION     DATDHO010000629.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1749
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129736"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..422
                     /locus_tag="VIY07_12090"
     CDS             <1..422
                     /locus_tag="VIY07_12090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382529.1"
                     /translation="ETIQSPSAHSSEYDVDKLSIFRKFLYSSELEKPMTKQQGAKENT
                     KIDAAGAHTNQTNTNIARSFLRLTDLDNRVFERLSRYEMTLWRPTAQILLLLSAIEFR
                     AKDRFSDERPGFGRVRKRHGRYLPFDFNPFSRSAGLR"
     gene            834..980
                     /locus_tag="VIY07_12095"
     CDS             834..980
                     /locus_tag="VIY07_12095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382530.1"
                     /translation="MMNFLATSNEDDLVTHEVSDEALESAGSDQIVANYTLAACTGLS
                     VCPG"
     gene            complement(1048..>1749)
                     /locus_tag="VIY07_12100"
     CDS             complement(1048..>1749)
                     /locus_tag="VIY07_12100"
                     /inference="COORDINATES: protein motif:HMM:NF014860.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6382531.1"
                     /translation="LGVHATAARREGEHFVLELDDGRKLSGDRLLVATGRRPRVDGLG
                     LETVGVLANPRGIPVDARLRAGERLWAIGDVNGIWQLTHVGKYQARVVAANILGEPHE
                     ANYEAVPRVTFTDPQAASVGAGEAAFSATALVSEVPKAATYTRAYDKSNGFITLLSDG
                     ERLTGAYALGPEAGEWLQQATLAIRARVPLEVLRDTIQPFPTFSEIYIAALKALQINT
                     ARQRVGSGDTGQIIR"
BASE COUNT          362 a          512 c          511 g          364 t
ORIGIN      
        1 ccgaaacgat tcagagtcca tccgcccact ccagtgaata cgatgtggat aagctaagta
       61 ttttccgcaa atttctgtat tcaagcgagt tagaaaagcc aatgactaag cagcaaggag
      121 ccaaggaaaa tactaagata gacgcagctg gggcccacac aaatcagacc aatacaaata
      181 ttgcgcgctc atttttacgg ctgacagacc tcgacaatcg ggtctttgaa cgccttagcc
      241 gttacgagat gaccttatgg cgcccaacag cacaaatttt gctactgctg agtgcaatag
      301 aatttcgcgc taaagatcgg ttttcggatg agcgtccagg ctttgggagg gtacgcaaaa
      361 ggcacggacg ttatctgccg tttgatttca atcctttttc gagatcggcc ggtttgcgat
      421 agaataattc ttggtctcct caaatttcat aagggcatgc ggcacagcca cgccgaggcg
      481 aatgcgcggc gtcgggaccc atagcgagaa gatgatgcaa gttgggttat tgcagcggct
      541 ttcgtcagat tccttgaacg cattcgagtc cgcgcctgca gccaatgctt ttaattgcgc
      601 cgccgaggtt ttgaggtcca cacctcgccc cttcccccga aagacgggtc ccacctccgc
      661 ccccgcctct gcccccagta accggaattc tacataggcc gttgctgcat cgcgttccgt
      721 ggtaattctc ggtcgatcat cgcaaaattg ttactcggaa gtgaggaatt gacctccaat
      781 aatgcacagc ggtctgtact cttgtcccat tgtcagtagt ccaggagacg aacatgatga
      841 actttcttgc cacctcgaac gaagacgacc tggtcaccca cgaagtatct gatgaggcat
      901 tggaatccgc aggaagcgat caaattgtgg caaactatac cctcgcggcc tgcactggtc
      961 tgtcagtttg cccaggctga tcggtctgat cgatcaccac aaagaaattg gaagtgaccg
     1021 cgcccccaaa cgggcgcggt tcttttatca gcggattatc tggccggtgt cgccgctccc
     1081 gacccgctgg cgcgcggtgt tgatctggag ggctttcagc gcggcaatgt atatctcgga
     1141 gaacgtaggg aacggctgga tggtgtcgcg cagcacctcg agcggcacgc gggcgcggat
     1201 cgccagggtg gcctgttgca gccattcgcc ggcctccggg ccgagcgcat aggcgccggt
     1261 cagccgttcg ccatcactga gcagggttat gaatccgttc gacttgtcgt acgcgcgcgt
     1321 gtaggtggcg gccttcggca cctctgacac gagggcggtc gcgctgaagg cggcttcgcc
     1381 cgcgccgacg gatgccgcct gcggatcggt gaaagttacc cgcggaacgg cttcgtagtt
     1441 ggcctcgtgc ggctcgccga gaatgttcgc tgcgacgact cgggcctgat acttcccgac
     1501 atgggtcagc tgccagatgc cgttgacatc gccgatcgcc cacaggcgct cgcccgcgcg
     1561 caggcgtgcg tcgaccggga tcccgcgggg gttggctaga acgccgacag tctccaggcc
     1621 gagcccatcg acgcgcggac gccggccagt ggcgacgagc agccggtcgc cgctcagctt
     1681 gcggccatcg tcgagttcga ggacaaagtg ctcgccctcg cgccgcgcgg cggtggcgtg
     1741 cacgccgag
//
LOCUS       DATDHO010000630         2476 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_29712, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000630 DATDHO010000000
VERSION     DATDHO010000630.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2476
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29712"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..555
                     /locus_tag="VIY07_12105"
     CDS             <1..555
                     /locus_tag="VIY07_12105"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382532.1"
                     /translation="TGGSDGLQGISMWPVLGLFRFDLYGYTAYTYSLVVLFVVFLGTR
                     RLINSPFGLALRGIRENLVRMPAIGADSRAHIRKAFTIAAAIAGLAGALLAQTTENVS
                     LESISFQRSADVLVMLVLGGAGRLYGGLVGAVIFMVARDQFSGIAPQYWYFWIGVLLV
                     TVVMVLPNGILGGLSQVYARWRQR"
     gene            552..1322
                     /locus_tag="VIY07_12110"
     CDS             552..1322
                     /locus_tag="VIY07_12110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382533.1"
                     /translation="MSTPDNRPPALATRNLSKAFGSLPVARDIEIDLPVGARYALIGP
                     NGAGKTTLINLMTGMVAPNAGQILLGGEDITALGPQERVRRGLARTFQINTLFAGLNA
                     LEAVTLAVAERRGLSREFWSGIGSHGEAIDEAYDILRKLRLGDSCYQVTRELPYGRQR
                     LLEIALALATRPKVLLLDEPAAGVPPEESGDIFEAVASLSDDLTLLFIEHDMHVVFRF
                     ASHIIVLVGGAIFTEGSPAEIAADPGVREVYLGKRKHG"
     gene            1315..2034
                     /locus_tag="VIY07_12115"
     CDS             1315..2034
                     /locus_tag="VIY07_12115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018063430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382534.1"
                     /translation="MADSLLKLENVTAGYGDAVVLHGISFDLSENGSLAVLGRNGVGK
                     STLLLTIMGYTQMRAGRLAWRGQDMARVSPNRRATNGIGWIAQEREIFPSLSLEENLT
                     VAARLGAWDLDAIFALFPRLAERRRNMGNQLSGGEQQMLAIARALMTNPALMLLDEPF
                     EGLAPVIVDELIAAMKTMLADRRIAIILVEQHTDIALEMTANAIVLERGAVAHRATSA
                     ELLKDTATLERLVGLRVAATA"
BASE COUNT          418 a          770 c          794 g          494 t
ORIGIN      
        1 accggcggca gcgacgggct gcagggcatc tcgatgtggc cggtgctcgg cctgttcagg
       61 ttcgatctct atggctacac cgcctacacc tattctctgg tggtgctttt cgtcgttttc
      121 ctcggcacgc gccggctgat caattcgccg tttggcctgg cgctgcgtgg catccgcgag
      181 aacttggtgc gcatgcccgc catcggcgcc gacagccgcg ctcatattcg caaagccttc
      241 accatcgctg ccgccatcgc cgggctcgcc ggcgcgctgc tggcgcagac gacggaaaac
      301 gtctcgctcg aatcgatcag tttccagcgc tcggccgacg tcctcgtgat gctggtgctt
      361 ggcggcgcag gccggcttta tggcgggctg gtgggcgccg tgatcttcat ggtcgcgcgg
      421 gaccagttct ccgggatagc gccgcaatac tggtacttct ggatcggggt cctgctggtg
      481 acggtcgtga tggtgcttcc caacggcatt ctcggtggcc tgtcgcaggt ctatgcgcgg
      541 tggaggcaaa ggtgagcacg cctgacaacc gaccgcctgc attggcgacg cgcaacttgt
      601 cgaaggcgtt tggctcgctg ccggtcgcgc gcgatatcga gatcgatctg ccagtcggcg
      661 cgcggtatgc gcttatcggc ccgaacggag ccggcaagac gacgctcatc aatctgatga
      721 ccggcatggt ggcgcccaat gccggacaaa tcctgctcgg gggcgaggac atcaccgcgc
      781 tcggcccgca ggaacgcgtg cgccgcgggc tggcgcgcac gttccagatc aacacattgt
      841 tcgccggtct caatgcgctc gaggcggtga cgcttgccgt ggctgaacgg cgcgggctct
      901 cccgggaatt ctggagtggc atcggctcgc atggcgaggc gatcgacgag gcctacgaca
      961 ttcttcgcaa gttgcggctg ggcgattcct gctatcaggt cacgcgtgaa ctgccgtacg
     1021 ggcgtcagcg gcttctggaa atcgcgctgg cgctcgcaac aaggccgaaa gtcctgctgc
     1081 tcgatgagcc cgcggcagga gtgccgccgg aggaaagcgg cgacattttc gaagcggtgg
     1141 ccagcctttc cgacgacctc actcttctat ttatcgagca cgacatgcac gtggtgttcc
     1201 gcttcgccag ccatatcatc gtgctggttg gaggggcgat cttcaccgaa ggttcgccgg
     1261 ctgagatcgc cgccgaccct ggtgtccgcg aagtttatct gggcaagcgc aagcatggct
     1321 gattccctgc tcaagctcga gaacgtgacg gccggctatg gcgatgccgt tgtgctgcat
     1381 ggcatttcgt tcgacctgtc ggagaacggc agcctggcgg tgctcggccg caacggcgtc
     1441 ggcaaatcga cattgctgct gacaatcatg ggttacacgc aaatgcgtgc cggtcggttg
     1501 gcgtggcgcg gccaggatat ggcgcgcgtg tcgcccaacc gccgcgcaac caacggcatc
     1561 ggttggatcg cccaggagcg cgaaatcttt ccctctttgt ccctcgaaga aaatcttacg
     1621 gtcgcggccc ggcttggcgc atgggatctc gatgcgatct ttgcactttt tcctcgcctc
     1681 gccgaacgcc gccgcaacat gggcaaccag ttgtccggag gcgagcagca gatgctcgcg
     1741 atcgcgcgcg cgttgatgac caatccggcg ctgatgctgc tggacgagcc gttcgaaggc
     1801 ctcgcgccgg tgatcgtgga cgagcttatt gcggcgatga agacgatgct ggccgaccgc
     1861 cgcatcgcca tcatcctggt cgagcagcac accgatatcg cgctggaaat gaccgccaat
     1921 gccatcgtgc tggaacgcgg cgccgtggcg catcgtgcga cttcggccga gctgctgaaa
     1981 gacaccgcca cgctcgagcg gctggtcggc ttgcgcgtcg ccgcaacggc ttgaatgcgg
     2041 cggatattgc ctcacactcc gttcggtccc gcgcaagcgg gaacccaggc agaatcccat
     2101 ttcttgttct gggtcccgcg ttcgcgggga cgaacggggt gagagttttt cgatacactg
     2161 catcgggttg cgcatggcgg cgacgatttg aaggcagtgg agccacagac tccgttcgtt
     2221 cccgcgcaag cgggaatcca gggcaacatt gccaaaatcc catttcttgt tctgggtccc
     2281 cgcgttctcg gggacgaacg gggcgagact tttaccaatt cattgcatcg ggttgcacat
     2341 cgctgcagcg gcgtgagaaa gtacccatta tcaaaaggaa gtcctgcatg gccaacccca
     2401 tgattccgcg cgaccgcgcc gaatattccg cgatcgtgga tcgccccccg ctcaagctgc
     2461 cgggcaacgc tcgcat
//
LOCUS       DATDHO010000631         3341 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_29743, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000631 DATDHO010000000
VERSION     DATDHO010000631.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3341)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3341)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3341
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29743"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..768
                     /locus_tag="VIY07_12120"
     CDS             <1..768
                     /locus_tag="VIY07_12120"
                     /inference="COORDINATES: protein motif:HMM:NF013777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY6382535.1"
                     /translation="ADRGRKVKNLDFTTEGGCRILGVVRTYGQYCPIARGAEIFAERW
                     TPLIIRNLHLGCGNFSEILEGAPGLSRTLLSERLKQLERLGVVESAPKPDGRGHHYEL
                     TSAGHDLFKVCQSLGEWGARWLEIAPENLDPFVALWSMCNALRRDRLPDRRVVIRFDF
                     TGRPRRERYWLLIELGDTEICKTNPGLDEDLYITAEAEAFVKWHAGQLTWAQATRDGR
                     IQLDGPPSLVRAFPTWNARSMFAHITPVSRSTASPAG"
     gene            complement(838..1686)
                     /locus_tag="VIY07_12125"
     CDS             complement(838..1686)
                     /locus_tag="VIY07_12125"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382536.1"
                     /translation="MAGLNEATPRRGEPDGVPEKAARFLYMLVWGFARIFSILALAIA
                     WEALARSGVFTPFQLPALSAVLGRIWTDAVSGDLWINTALTLYRALVAFAICAIGGVM
                     IGMAMSRNVIAHWFFDPIVSVGFPMPKIAFLPVVILWLGVYDLSKITIIVIDAIFPVI
                     AATVIAIQGVERELIWSARNMGATNRELLHQVILPAASPQIMTGLQVALPLSLIVAVV
                     AEMLMGGYGLGGAMITASRFANSTSVFAGIVEIAVVGYVLVKAMALIRRRLLIWHQEA
                     AAPYTQ"
     gene            complement(1674..2417)
                     /locus_tag="VIY07_12130"
     CDS             complement(1674..2417)
                     /locus_tag="VIY07_12130"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382537.1"
                     /translation="MKQSFIRYLPLVLLAIAWEVIARLELVSSSALPPLSDVIIAGID
                     MVKDGELISNGTSSLYRAGAGLTLAIIVGGTVGIAMAWWKPINVLLAPLVEIFYPLPK
                     SALIPVTVIWLGFGDGSKILLIFLGCMLPVTIGAFNGARSSEQALVWSARSMGASRLR
                     MLWDVVVPSAMPELLNGIRTALALSFILLVSSELIVAQKGFGHLIGVLGANGSYDAMY
                     AVVLCVAFLGFAADRLYLQITKRTLAWRD"
     gene            complement(2433..3254)
                     /locus_tag="VIY07_12135"
     CDS             complement(2433..3254)
                     /locus_tag="VIY07_12135"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382538.1"
                     /translation="MRSLGTLSGDMTVAAQIVIDRVNHLYRPPRGREVLALDQVSLEV
                     ANREFVALLGPSGCGKSTLLYLIGGFLPVETGAILIDGQKVAGPGPDRGIVFQHFALF
                     PWKTVRGNILYGLERQGMPKDEREKRTMDFIDLVGLAGFEDSYPSQLSGGMKQRTAIA
                     RTLAFDPKILLMDEPFGALDAQTRGLMQSELLRIWQRTPKTVIFVTHDVQEAVYLADR
                     VAVMSARPGRIKTIVNTRFDKNDPDIFKNKFFVEKVDEIWNLVKEEAIKAQGKRV"
BASE COUNT          710 a         1074 c          973 g          584 t
ORIGIN      
        1 gcggaccgcg gccgtaaagt caagaatctg gacttcacaa ccgaaggcgg gtgccgaata
       61 cttggcgttg tgaggacgta cggccaatac tgccccatcg cccgcggcgc cgagatcttc
      121 gccgagcgct ggacaccgct gatcattcgc aacctgcacc ttggctgcgg aaacttcagc
      181 gagatcctgg agggcgcgcc cggactctcc cgaaccctgc tctcagagcg gctcaagcag
      241 ctcgaacggc tcggtgtcgt cgagtcggca cccaagcccg acgggcgcgg gcaccactac
      301 gagctcacgt ctgcgggtca cgacctcttc aaagtctgcc agtcgctcgg cgagtggggt
      361 gcgcgttggc tcgagatcgc gcccgagaat ctcgacccct ttgtggctct gtggtcgatg
      421 tgcaatgcgc tgcgccgaga ccggcttccg gatcgacgcg tcgtcatccg cttcgatttc
      481 accgggcgcc cgcgccgtga acgctattgg ctactcatcg agctcggaga caccgagatc
      541 tgcaagacaa accccggcct cgacgaggac ctctacatca cggcggaagc cgaagctttc
      601 gtcaaatggc acgccggcca actcacctgg gctcaagcca cccgtgacgg ccgcatccaa
      661 ctcgacggcc ccccgtcgct ggtaagggcc ttcccgacct ggaacgcccg cagcatgttc
      721 gcccacatca cgccggtctc ccgcagcacc gcgagccccg caggctgaca tcaagcgatt
      781 cctggccaac tgttagcccg atgaaaccgg gcgttggtcc cttcaaaaat cccacattta
      841 ctgcgtgtac ggtgctgccg cttcctggtg ccagatcagc aggcggcgtc gaatcagagc
      901 catggccttg accagcacgt agccgaccac ggcgatctcg acgatgccgg cgaatacgct
      961 ggtcgaattg gcaaagcggg aagccgttat cattgcgcca ccgagaccgt atccgcccat
     1021 cagcatttcg gccaccaccg cgacaataag cgacagcggc aaggccacct gcaatccggt
     1081 catgatttgc ggcgacgccg cgggcaagat cacctggtgc aggagttcgc gattggtcgc
     1141 tcccatgttg cgtgccgacc agatcagctc ccgctcgacc ccctgaatgg cgatgaccgt
     1201 cgccgcaatt acggggaaga tggcatcgat gacgatgatg gtgattttcg aaaggtcata
     1261 gacgccaagc cagagaatca ccacgggcag gaaagcgatc ttcggcattg gaaagccgac
     1321 cgagacgatg gggtcgaaaa accaatgcgc gatcacattg cgtgacatgg ccattccaat
     1381 catcacgccc ccgatcgcgc aaattgcgaa tgcgaccagc gcgcggtaga gcgtaagcgc
     1441 ggtattgatc caaagatcgc cggacacggc gtcggtccat atccgtccga gcacggcgct
     1501 caacgccggc aattgaaatg gggtgaagac gccgctccgc gccagcgctt cccaggcaat
     1561 tgccagcgcc agaattgaga aaatgcgcgc gaagccccat accagcatgt acaggaatcg
     1621 cgccgccttt tccggcacgc cgtctggttc gccgcggcgc ggcgtcgctt cgttcaatcc
     1681 cgccatgcga gcgtccgctt ggtgatctgc agatagagtc gatcggccgc gaagccgaga
     1741 aacgccacgc agagaacaac cgcatacatc gcgtcgtagg acccgttggc tccgagcacg
     1801 ccaatcaaat ggccaaagcc cttctgcgcc acgatcagtt cggacgaaac caggagaata
     1861 aaggaaagcg cgagcgcagt gcggatgccg ttgagcagct ccggcatggc gctaggcacg
     1921 acgacatccc aaagcatgcg cagccggctt gcgcccatgc tgcgcgccga ccacaccagc
     1981 gcctgctcgc tcgaacgcgc gccgttgaag gcgccgattg tcaccgggag catgcagccc
     2041 aggaagatca gcaggatctt tgaaccgtcg ccaaagccga gccagatcac cgtgacgggg
     2101 atcagtgccg acttcggcag cggataaaaa atctcaacca gcggcgcgag aagaacgttg
     2161 atcggcttcc accaggccat ggcgatgcca actgttcctc cgacgatgat cgccagcgtc
     2221 agtcccgcgc cggcgcggta cagcgaggac gtgccgttgc tgatgagctc gccgtccttg
     2281 accatgtcaa taccggcgat gatgacatcg gagagagggg gcagcgcact gctcgacaca
     2341 agctccagcc gcgcgatcac ctcccaggcg atcgcgagca gtaccagcgg gagatatcga
     2401 ataaaagact gtttcatgct tcaagcgccg cgctagaccc gtttgccctg cgccttgatg
     2461 gcttcttcct tcaccagatt ccagatttcg tcgaccttct cgacgaagaa cttgttcttg
     2521 aaaatgtccg gatcgttctt gtcgaacctc gtgttgacga tggtcttgat gcgacccgga
     2581 cgggccgaca tgacggccac gcgatcggca agatagaccg cctcctgcac atcgtgagtc
     2641 acgaagatca ccgttttcgg agtgcgttgc cagatgcgca agagctcgct ctgcatcagg
     2701 ccacgggtct gcgcatcgag cgcgccgaac ggctcatcca tcaacagaat cttgggatcg
     2761 aaggcgagtg tccgcgcgat cgcggtgcgc tgcttcatgc ctcccgagag ctgtgacggg
     2821 tagctgtcct cgaatccggc aaggccgacg aggtcgatga aatccattgt gcgcttctca
     2881 cgttcgtcct taggcatgcc ctgtcgttca agcccgtaca gaatgttgcc gcgcacggtt
     2941 ttccacggaa acaatgcgaa gtgctgaaag acgatgccgc ggtcaggccc cgggccggcg
     3001 accttctggc catcgatcag gatcgctccg gtctccaccg gcaaaaagcc gccgatgaga
     3061 tacagcagcg tcgacttgcc gcaaccggat gggccgagca aggcgacaaa ctcgcgattg
     3121 gctacctcaa gtgagacctg atcgagcgca agcacctcgc gtccgcgcgg cggacgatag
     3181 aggtgattca cccggtcgat aacgatttgc gcggctacgg tcatgtcgcc ggaaagcgtc
     3241 cccaacgagc gcaatctgtc aagctccggg cacgctggtc cggcgttttc atttccctat
     3301 aatccacgca ccgtcagact tcttgaaagg aaacgttgtg c
//
LOCUS       DATDHO010000632         2009 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_29802, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000632 DATDHO010000000
VERSION     DATDHO010000632.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2009
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29802"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1053)
                     /locus_tag="VIY07_12140"
     CDS             complement(<1..1053)
                     /locus_tag="VIY07_12140"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY6382539.1"
                     /translation="MKRRGDVQGKRTRPRLNKPAATKRRLQPKARRKANEATVAHQLD
                     ARTREMRELQNQQVATSKVLQVISSSRGRLEPVFRVILENAVSLCGAKFGNLWLREGD
                     VFRIGATYGAPPAYAEFLRRDPVVHPAKGTALGRIAATKQLVHISDVRKDKGYSGSSP
                     VQVGTRRFARARTVLGVPMLKNGELIGTIVIYRQEVRAFTRKQIELVENFAAQAVIAI
                     ENTRLLGDLRESLQQQTATADVLKVISRSTFDLQAVLDTLVVSAARLCDAEVANIWRP
                     DGESFRLAASYVVSGKRREALKNQEYLRSITIEPGRGSIVGRTLIEGRVIQVPDLQKD
                     PEYNLRSLLAFGSYRTA"
     gene            1290..>2009
                     /locus_tag="VIY07_12145"
     CDS             1290..>2009
                     /locus_tag="VIY07_12145"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY6382540.1"
                     /translation="MSKISPNPFTTRPEIDGTFGVVASTHWIATAVGMATLEKGGNAF
                     DAAVATAFTLQVVEPHLNGPGGDVPVILHDVRRGRTEVICGQGPAPAKATVAYYRAQG
                     IDLIPGTGLLAACVPGMFDTWMLLLRDYGTMTLAEVLGPAISYAQNGHPLVERANATI
                     ALVQRLFREHWPTSAAIYLPNGKVPETGTLFTNKTLAHTYTRVLKQAESAGGDRVAQI
                     ERARKVWSQGFVADAIDRFCRT"
BASE COUNT          407 a          609 c          573 g          420 t
ORIGIN      
        1 cgccgtgcga tagctgccga acgccaggag gctcctcaaa ttgtactcgg gatccttttg
       61 cagatcgggc acctgaatga cccgtccttc gatcagcgtg cggccgacaa tcgatccgcg
      121 accaggttcg atcgtgatgc ttcgcaggta ttcctggttc tttaatgcct ctcgccgttt
      181 gcctgagaca acataggagg ccgcgagccg aaaactttct ccgtcgggac gccagatgtt
      241 ggctacttcc gcatcgcaaa gtctggcggc cgataccacc agcgtatcga gcactgcctg
      301 aaggtcgaat gtcgagcggc tgatgacttt gaggacatcg gccgtcgcag tctgctgttg
      361 cagggactcg cgtagatcgc cgagcaatcg tgtgttttcg attgcgataa ctgcttgcgc
      421 cgcaaagttt tcgacgagtt caatctgttt cctggtaaag gcgcggacct cttgacgata
      481 gatcacaatc gtcccgatca gttcgccatt cttgagcatc ggaacgccca aaaccgtgcg
      541 ggcgcgtgca aacctgcgag tgccgacctg aaccggacta gatcccgaat atcctttgtc
      601 ctttctcaca tcggaaatgt gaacgagctg tttggtcgca gcgatgcgac cgagcgccgt
      661 gcctttcgcg ggatgaacga cagggtcacg ccgcaaaaac tcggcatagg cgggtggcgc
      721 gccataagtc gctccaatgc gaaatacgtc cccctcgcga agccagagat tgccgaactt
      781 cgcgccgcaa aggctcaccg cgttctcaag tatgacccga aagaccggct cgagcctgcc
      841 gcgggacgaa ctgatgactt gcagcacctt cgaggtcgcg acctgctggt tctgcaattc
      901 gcgcatctcg cgcgtgcgcg catcgagctg gtgcgcgacg gtcgcttcat ttgccttgcg
      961 tcgagctttt ggctgcaaac gacgttttgt cgccgccggc ttattcagcc ggggtctagt
     1021 gcgtttcccc tgcacatcac cacgtcgttt cactgccgcc cccggcaaaa accgactgaa
     1081 tttcaagcct attgcaccat ggtttgcatc cattgggaac agggccagtg ctggctggat
     1141 tgccgtggac ggacgggcca tttgcagtag actgccttgg caattcacat ggcctaaagg
     1201 tcttattctt ctcgaaccga taaggcgtca gactgccgaa agcgaccatt gccgtttcgg
     1261 ctcataattc cgacgctgtc cctctcgcca tgtcgaaaat aagccccaac ccattcacta
     1321 cgcggcccga gatcgacggc accttcgggg tcgtggcatc gacccattgg attgcgacgg
     1381 cggttggaat ggccacgctg gaaaaaggcg gcaacgcctt cgatgccgct gttgcaacgg
     1441 ccttcacgct tcaggttgtc gagccacatc tgaatgggcc gggcggcgat gtgccggtga
     1501 tacttcacga cgtaaggcgt gggcgcacgg aagtgatatg cggacaaggc cccgcgccgg
     1561 caaaagcgac ggttgcctac tatcgcgcgc aaggcatcga cctcattccg gggacgggcc
     1621 tgttggccgc ttgcgtcccg ggcatgttcg acacctggat gctgctactg cgcgattacg
     1681 gcaccatgac cctggcggaa gtgctcggcc ccgcgatcag ttacgcgcaa aatggtcatc
     1741 ccctggtcga acgcgccaat gcgacgatcg cgctcgtcca acgcctcttc cgtgagcact
     1801 ggccgacatc ggcggcgatc tatctgccaa acggaaaggt gccggaaaca ggtacattgt
     1861 tcaccaacaa aactctcgcg cacacctaca cgcgcgtcct caaacaagcc gaaagcgccg
     1921 gcggcgatcg tgtcgcgcaa atcgaacgag cgcgcaaagt ctggtcgcaa ggatttgtgg
     1981 cggatgcaat tgatcgtttc tgtcgcacg
//
LOCUS       DATDHO010000633         2225 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_29809, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000633 DATDHO010000000
VERSION     DATDHO010000633.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29809"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            522..776
                     /locus_tag="VIY07_12150"
     CDS             522..776
                     /locus_tag="VIY07_12150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382541.1"
                     /translation="MRDLEQLFRRCHFVPIVLPPNKRHVVVHLHLRYLDLMLRTGLVR
                     GGSSSVSLLTPHPIWDHLLRCQPAIAHGVFDLGPAQTDVG"
     gene            1224..>2225
                     /locus_tag="VIY07_12155"
     CDS             1224..>2225
                     /locus_tag="VIY07_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018210494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382542.1"
                     /translation="MTTFMRSQKLLVSAGIAALGGAALLTLSVGNIFAPAGAGVSAVD
                     ASSPFVGAEFPVCHSPAAIALPKMMLRLAQTEVPRAEMSAASSAVGFADTEPPLWGGL
                     GSVTYKITTTNDRAQAYFDQGLRLAYAFNHGEAQRAFRMAQKLDPDCAICFWGEALVL
                     GPNINLPMQEDAVVPAFAAAQKAKALGGKASPREQALIGALTARYGSDPKAARAPFDA
                     AYAAEMAKVAAQFPDDDEIATLYAEAVMDLSPWNYWKPGGREPNPQSRPIVPTLERVL
                     ARNPDHPGAIHLYIHAVEASDRPKRAEPYADRLRGATPGAGHLVHMPSHIYYRVGRYL
                     "
BASE COUNT          432 a          657 c          644 g          492 t
ORIGIN      
        1 gtccgctttg ggtccataag cagacatttc acagtgcact ggtcatgtcc gctttacccc
       61 gaaagcagac atgtgcagtg cactaaccca tgtccgcttg ggccaaaagc ggacatgcag
      121 cgcagcaaat cagcgtagtt atttgatcgc ggttgtcgaa tagctgcggt ctcacaaatt
      181 ttcgtttgag tgcggcgaca agccaccctt ccgggcgcag ccgtattctt cacataggtg
      241 cgaaagatcg ccttcgcaca gatagcctgt aattggacaa agaaatggcg cgtggcggcc
      301 gtaactggaa gtgctccaat cgacgtcacg ggggtttttt gtgtcttcgc ggttggtttc
      361 aaaaccgaaa ctgatcacac taccgttcat cgctcagtcc ctccgatacg atctatgaag
      421 atacgccttt ccataagtat tggtttcgca ctcgcgcgcg gttacctcat tgatttcgtc
      481 gcaaccgcgg cggcgcggct cagatattgg cgggcttttt catgcgcgat ctcgagcagt
      541 tgttcaggcg atgccatttc gttccgatag ttcttccgcc aaataaaagg cacgtcgtcg
      601 ttcatttgca cctccgttat ttagatctga tgctgcgcac cggtttggtg cgcggcggtt
      661 caagcagcgt gtcgttgctg actcctcatc cgatttggga ccatcttctg cgttgccaac
      721 cggccattgc gcacggcgtg ttcgatctcg gcccggcgca gaccgatgtc ggctagaaaa
      781 tatcgcacac aatccgcgag cgaggtcgcg agatagattg caacagtttg cagacaagaa
      841 gccatgagcg cggtgcgctc ctcgcgtgcc cagcgcataa gctgatagga cgacattggt
      901 tcgattgggt tggtttgtcc cgacatggta gaaatcctta agtgcgcttt gtctgtcgcg
      961 gaatttgcct ggagcacgct agaaagactt tgcccaaagc ttgatttgct cttgagagaa
     1021 acttgatttt tcgtgagaca cccatctcgt attgcaccta ggtatagctt tcgccttctc
     1081 atccgatacc aaagtattct gggtatggaa cgcggagcgt tttagcttgc ggcccgcagt
     1141 ccgcctcggg ttcgttagat ggactgcgaa aatctcacat tgttatttgg cgtattttta
     1201 ctccgcctga tttggggcat cacatgacga cattcatgcg atcgcaaaag cttctggtct
     1261 ctgcgggaat tgcggcactc ggcggcgcgg cactgctgac gctgtctgtc gggaacatct
     1321 ttgcccctgc gggtgcgggc gtgagcgcag tagacgcatc gtcgccattc gtcggcgcgg
     1381 aatttccggt ctgccactcg ccggccgcaa tcgcattgcc gaagatgatg cttcgcttgg
     1441 cccagactga agtgccacgt gccgagatga gcgcagcaag ttcggcggtg gggttcgcgg
     1501 acaccgagcc gccgctgtgg ggcggccttg ggtccgtcac ttacaagatt acgaccacga
     1561 acgaccgcgc acaggcttat ttcgatcagg gcctgcgtct cgcctacgcg ttcaatcatg
     1621 gcgaggcgca gcgcgccttc cgcatggcgc agaagcttga tcccgactgc gccatctgct
     1681 tctggggcga ggcgctggtg cttggtccca acatcaacct gccgatgcag gaagatgcgg
     1741 tggtgcccgc attcgctgcc gcgcagaagg cgaaggcgct tggcggcaaa gcgagcccac
     1801 gcgagcaggc gctgatcggc gcgctcacgg cgcgctacgg cagcgacccg aaggccgcgc
     1861 gcgcgccgtt cgacgcagcc tatgcggccg aaatggcaaa ggtcgcggcg cagtttcccg
     1921 atgacgacga aatcgccacg ctctacgccg aggcggtcat ggatctcagc ccctggaatt
     1981 actggaagcc aggcggacgc gaacccaacc cgcagagcag gccgatcgtg ccgacactcg
     2041 aacgcgtgct ggctcgcaac ccggaccatc ccggtgcaat tcacctctac atccatgccg
     2101 tcgaggcgtc ggatcggccc aaacgcgccg agccctatgc cgatcgactg cgcggcgcga
     2161 cccccggtgc gggccacctc gtgcacatgc cgagccacat ctactatcgg gtcggccgct
     2221 atctt
//
LOCUS       DATDHO010000634         4601 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_228155, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000634 DATDHO010000000
VERSION     DATDHO010000634.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4601)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4601)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4601
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_228155"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            78..227
                     /locus_tag="VIY07_12160"
     CDS             78..227
                     /locus_tag="VIY07_12160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382543.1"
                     /translation="MSKQVYESIIEAGAKLVDMQVLLGHVNLATTQIYTHVSEDRMSQ
                     VVGRL"
     gene            complement(356..934)
                     /locus_tag="VIY07_12165"
     CDS             complement(356..934)
                     /locus_tag="VIY07_12165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012338198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEY6382544.1"
                     /translation="MIVGYARTSTVCQIAGFEAQLKELQAAGCEKIFREQVSSVAVRA
                     QLQAALEFVREGDVLVVTKLDRLVRSVAELMVIIQALDQKQVGMRILNLGMDTRTPTG
                     KLMLTVLGGVAQFEREMMLERQLEGIAKAQAAGKYRGRKPIAMERQAEVRRLAATGMA
                     KARIALELKIGEATVYRILARDREQAHPASSA"
     gene            1155..4151
                     /locus_tag="VIY07_12170"
     CDS             1155..4151
                     /locus_tag="VIY07_12170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003089110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3 family transposase"
                     /protein_id="HEY6382545.1"
                     /translation="MPVSFLTAAQRESYGRYAAAPTPDELTRCFHLNEDDLAQIMLCR
                     GNHNRLGFALQLTTVRFLGTFIADPLAVPSSVLQTVARQLDVLNFDGLQSYRTGEQRW
                     DHVTKIRVYYGYSDITEPRVSFRLSRWLYGLCWTGTERPGVLFERVIGWLLTHKVLLP
                     GRSTLERFILRTRARVEERLWHSLVRGLTSEQRMQLNHLLTIPQGNRNSRLDQLRSGP
                     TRISGPALRVAIYRLQSIRELGITLPAVARIPFGKIAALARFANRAKAQAISRMPAAR
                     RLATLVAFVHCLEVTAQDDVLEVLETLLHELFSNAIKADKKARLRTLKDLDPAAATLA
                     EACRLLLDPALPDEELRRKVFAQVPHGVLEQALATVGALIRPPDDVYYLALAEHYRSV
                     RGYLPAVLKHLHFEAGPAGKPVVAAFDWLRDNHHRRKPTAEAPREIVGKSWQHYVVLK
                     EGGIDLRAYTFCLLDQLKTALHRRDVFAKPSWRYADPRANLLAEAEWEAMRPIVCRTL
                     GLPPHPQPLLEALTGELDRTYREVAHRLPNNPAVRFETVDGKEELILTPLDQLEEPPS
                     LLQLRATVAARLPRVDLPEVLLEIAARTNFADAFTHLTERTARVTDLSTSLCAVLMAE
                     ACNTGPEPFIRHDNPALRRDRLAWVKQNYLRDDTLTDANAKLVAAQNKIALAHAWGGG
                     EVASADGMRFVVPIRTVHAGPNPKYFGPLKGVTWYNLLSDQFTGLNAIPVPGTLRDSL
                     VLLAVVLEQQTELRPTQIMTDTGAYSDVVFGLFRLLGYRFSPRLADIGGTRFWRIDPT
                     ADYGKLDRISQHRLSLQRIVLQWDDMLRLAGSLLLGRVPASGIMRTLQIGDNPTRLAQ
                     AIAEFGRLDKTLHCLNFIDDETQRRSTLTQLNRGEGRHSLARVVFHGKRGELRQRYRE
                     GQEDQLGSLGLVINMIVLWNTIYIEAALNQLRKEGYAVRDEDAARLSPLVHEHLNVLG
                     RYSFSMPEAVAKGELRPLRNPAQDLD"
BASE COUNT          916 a         1395 c         1333 g          957 t
ORIGIN      
        1 cttcgccttt gagcgggaga taaccatctc cgaggtggtg cgggcagcgt tgagtgagta
       61 tatgagtaaa taagttggtg agtaagcaag tctatgagtc aattatcgag gcgggtgcca
      121 agctcgtgga catgcaggtg ctgctcgggc atgtgaacct ggcgaccacg cagatttata
      181 cgcacgtcag cgaggatagg atgagccagg tggtggggag gctatagggc ctgcctgatt
      241 cagtgggtcg ggacgtcagt taccagccat gcggctgtta cttcgtttcc aaacggcctg
      301 atctcggggt ttgagtagca actggacgga aagtcgggtt aagagctcgt catatttacg
      361 ccgatgaggc tgggtgagcc tgctcacggt ctctggccag aatccggtag actgtggctt
      421 cgccgatttt tagttccagg gcaatgcgtg ccttggccat accggtggcc gccaagcgac
      481 gaacttcggc ctgccgttcc atcgcgatcg gcttccgacc ccgatacttg ccggcggctt
      541 gggctttagc gatgccttct agctgccgtt ccaacatcat ttcccgctcg aactgtgcaa
      601 caccaccgag cacagtgagc atcagcttac cggtcggcgt ccgggtgtcc attcccagat
      661 tgaggatgcg cattccgacc tgcttctggt ccagggcctg gatgatcacc atgagttccg
      721 ccaccgatcg gacgagccga tcgagcttgg tcaccaccaa cacatccccc tcgcggacaa
      781 attcaagcgc cgcctgaagt tgggcacgaa ccgcaaccga cgatacttgc tcgcgaaaaa
      841 tcttctcgca gccggccgct tgcagttcct tcaattgcgc ctcgaagcca gcgatttggc
      901 agacagtgga tgttcgtgcg tagccaacga tcatcttcta tcatacgagc taaagatgtt
      961 gtgatagtaa tacgaccaaa acggtgaaac aactttagtg atagactttc cggtagtctc
     1021 cgcgcctatt gatagggtac ggtctattga tagccagtcc cgatcgaagc cacgcggttg
     1081 aagcgcgtgt tttggcggca tggaccaagt gtagcacttt cgtaaaacag tctatcctac
     1141 ctcaagcccg ccctatgccc gtcagcttcc tgaccgctgc ccagcgcgaa agctacggcc
     1201 gctatgcggc ggcgccgacg cctgacgagc tgacccgatg cttccacctc aacgaggacg
     1261 atctggcgca gatcatgctc tgccggggca accacaatcg ccttggcttc gccctgcagc
     1321 tcacgaccgt ccgctttctt ggtaccttca tcgccgatcc gctggcggtg ccgtcatcgg
     1381 tgctgcaaac cgtcgcccgg caattggatg ttctgaactt cgacggatta cagtcgtatc
     1441 gcactggcga acaacgctgg gaccacgtca ccaagatccg tgtctactac ggctacagtg
     1501 acattactga accccgtgtc agcttccgac tcagccgctg gctctatggt ttgtgctgga
     1561 ccggaaccga acggccgggc gtgctcttcg agcgcgtcat cggttggtta ttgacccaca
     1621 aggtactgct acccgggcgc agcacactgg agcggtttat cctccgaacg cgcgcccgcg
     1681 tcgaggaacg gctatggcat tcattggtgc gcgggctgac ctcggaacag cgaatgcagt
     1741 tgaaccatct cctgacgatt ccgcagggca accgcaattc ccggctcgac cagctccgct
     1801 cgggacccac ccgaattagc ggtccggcct tacgggtcgc gatttatcgt ttgcaatcga
     1861 tccgcgaact gggcattacc ctgccggcgg tggcccgcat tccattcggc aagatcgccg
     1921 cactagcgcg ctttgccaac cgtgccaagg cgcaggcgat cagccgtatg cccgccgctc
     1981 gccggctcgc caccctggtg gcgttcgtcc attgcctgga agtgacggcg caggacgacg
     2041 tactggaagt gctggagacg ctgttgcacg agctgttcag caacgccata aaggcggaca
     2101 agaaagcccg gttgcggacc ctcaaggacc tagacccagc ggcggccacc ttggcggaag
     2161 cgtgccgact gttgctcgac cccgccttgc ccgacgagga gttgcgccgc aaggtcttcg
     2221 cacaggttcc ccacggggtg cttgaacagg cgttggcaac ggtcggcgcc ctgatccggc
     2281 cacccgacga cgtgtattac ttggctttgg ccgagcatta ccgcagcgtc cggggctatc
     2341 tgcccgccgt gctgaaacac ctccacttcg aggcgggtcc tgccggcaag ccggtggtgg
     2401 cggcgttcga ctggctgcgc gacaaccacc atcgccgcaa gccgaccgca gaggctccgc
     2461 gcgagatcgt cggcaagtcc tggcagcatt acgttgtgct caaagagggc ggcatcgatc
     2521 tacgtgccta caccttttgc ctgctggatc aactgaaaac cgccctgcac cggcgtgacg
     2581 tgtttgccaa accgagctgg cgctatgccg atccacgggc gaacctgctg gcggaggcgg
     2641 aatgggaagc gatgcggccg atcgtctgcc gcacgctggg actgccgccc catccgcaac
     2701 ccctgctgga ggccttgact ggcgagcttg atcggaccta tcgcgaggtg gcgcaccggc
     2761 tgcccaacaa tcccgcggtc cggttcgaaa ccgtcgatgg caaggaagaa ctgatcctca
     2821 cgcccttgga ccaactggag gaaccgcctt cgttgctcca gttgcgcgcc accgtggccg
     2881 cccggctgcc tcgtgtcgat ctaccggagg tgctgctgga aattgccgcg cggacgaatt
     2941 ttgccgacgc cttcacgcac ctcaccgaac gcaccgcacg ggtaaccgat ttgagcacga
     3001 gcctgtgtgc cgtattgatg gctgaagcgt gcaacacagg tcccgagccg ttcatccgtc
     3061 acgacaatcc ggccttacgg cgcgaccgtc tggcctgggt caagcaaaac tacctgcgcg
     3121 acgacacgct gaccgacgcc aatgccaaac tggtagcggc ccagaacaaa attgcgctgg
     3181 cccatgcctg gggcggcggc gaggtggcgt cggcggacgg tatgcgcttc gtcgtgccga
     3241 tccggaccgt ccatgccggt cccaatccta agtatttcgg cccgctcaag ggggtgacct
     3301 ggtacaacct gctgtccgat caatttaccg gtttgaacgc catcccggtg cccggcacct
     3361 tgcgcgatag tttggtcttg ctggccgtgg tgctcgaaca gcaaaccgag ttgaggccta
     3421 cgcagatcat gaccgatacc ggcgcctata gcgatgtcgt gtttgggctg tttcggttgc
     3481 tcggctatcg ttttagtccg aggctcgcag acatcggcgg cacgcgcttc tggcgcatcg
     3541 atccgacggc cgattatgga aaacttgacc ggatttccca acatcgattg agcttgcaac
     3601 ggatcgttct ccagtgggat gacatgttgc ggttagccgg ttcgctgctg ttgggacgag
     3661 tgccggcgag cggcatcatg cgtacgctgc agatcggcga caatccgacg cggctggcgc
     3721 aggcgatcgc ggaattcggg cgcctcgata agacgttgca ttgcctaaac tttatcgatg
     3781 acgaaaccca gcgccgaagc acgctaaccc aactcaaccg cggtgaaggg cggcacagtc
     3841 tcgcccgcgt cgtcttccat ggcaagcgcg gcgagctgcg tcagcgctac cgggaagggc
     3901 aggaggacca gttgggctcg ctgggactcg tgatcaatat gatcgtgttg tggaacacaa
     3961 tctatatcga agcggcactc aaccaactgc gcaaagaagg ttatgcggtt cgggacgagg
     4021 atgcggcgag gctgtcgccg ctggtccacg aacacctcaa cgtcctcggt cggtactcct
     4081 tctcgatgcc ggaagcggtc gcgaagggtg agctacggcc gttgcgcaat ccggcgcagg
     4141 atctcgacta gcctgcccca cggtcccctt tcgtaacatg acgatggctt aacccgactt
     4201 tccgtccagt tgctactcaa accccaacat cgaaagtggg gatgcatagt atcgctggaa
     4261 cagtatcatt attttacttt atataccgat acagggtagt ccgtgaaata ttgagagtct
     4321 tgcaaatctc atcaattgag ttctctttat tacggtacaa atcatgtagc atcttagctt
     4381 tttttggggt gagtgttttt ggcctgccgc cctttctgcc tctggctcta gctgtaacga
     4441 cctgcaatcg aaacaccgca aacctgcaat cagcgcaatt ttcgaccgga attagttgca
     4501 actaacgggc actcaaaccg acattatctg caactgaacc tgcaatccac cgcgccgacc
     4561 tgcaatcagc cgccgcggac cgggattatt tgcaactgaa a
//
LOCUS       DATDHO010000635         1504 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_472367, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000635 DATDHO010000000
VERSION     DATDHO010000635.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1504)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1504)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1504
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_472367"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1426
                     /locus_tag="VIY07_12175"
     CDS             <1..1426
                     /locus_tag="VIY07_12175"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY6382546.1"
                     /translation="GSAGLLLANWGTDLLVSLSPPYLLGLQNVEINAPVLIFTLAVSL
                     ATSVFIGLAPAYELSRLDLHEVLKESGRGGADSKFGRRLRALFVIGEIALALALLVGA
                     GLLINSFAHLQAVDPGFNPQNLLTMGVSRNWQQPERQRIEFFKQAVERLQSIPGVTAA
                     GAVSALPLTGSAAGVRFFIEGRPKPLPGQHLLTRVLVTDANYFRTMQIPLRHGRLYTE
                     QETTEARGLVVINEALARRYFPNEDPLGKQVTIHSRPPGRNPPVEIIGIVGDVKLDTM
                     EKVGEPTVYWPHSELALPGMTLVMRTSGDRMNVIAAARAAIYSLDPEQPIADLSTMES
                     WLANSMGRARFITVLLAVFASVALMLASVGVYGVMAYAVAQRNQEIGIRMALGAQTKD
                     VLMLVIREGMALALIGIAIGMLAAFVLTRWMETLLFEVRPTDPLTYTIIAAVLALVTL
                     ISCWIPARRAAKVDPLIALRSIGA"
BASE COUNT          306 a          411 c          448 g          339 t
ORIGIN      
        1 tggctctgcc ggactgctgc tggccaactg ggggaccgac ctgctggtct cattgagccc
       61 accctatttg ctcggtctgc agaacgtcga gatcaacgcg ccggtgctca tcttcacact
      121 cgccgtctca ctcgcgacca gtgtctttat cggcctcgcg ccggcttacg aattgtcacg
      181 tctagacctg catgaagtgc tcaaggaaag cggccggggc ggcgcagaca gcaaatttgg
      241 ccggcgcctg cgtgctctct tcgtcatcgg cgaaattgcg ctggcgctgg cgctgcttgt
      301 cggcgcaggt ctgttgatta acagcttcgc ccatctgcaa gcggtcgacc ccggtttcaa
      361 tccgcaaaat ctattgacga tgggggtgtc gcggaactgg cagcagcccg aacgacaacg
      421 catcgaattc ttcaagcagg cggtcgagcg tcttcagtct attccaggag tgacagctgc
      481 cggcgcagtc tcagccctgc cgttaaccgg ttccgccgca ggcgttcgat tttttatcga
      541 agggcgtccg aagcccctgc ctggacagca tctgctcacg cgagtgctcg tcactgatgc
      601 caattatttt cgcacgatgc agattccgct ccgccatgga cgcctctata ccgaacagga
      661 aaccactgaa gctcgcggcc tggtggtaat taacgaagcg ctggcacgca gatactttcc
      721 aaacgaagac ccgttaggca aacaggtaac gattcattcc cggccacccg gccgcaaccc
      781 gcctgtggag ataatcggca tcgtcggtga cgtgaagttg gacaccatgg agaaggtcgg
      841 ggagccaacc gtctattggc cacattcgga actcgcatta ccaggtatga cgctcgtcat
      901 gcgaacgtcg ggtgaccgga tgaatgtgat tgcggcagca cgtgcggcga tttactcgct
      961 cgatcccgaa cagccgatcg ccgacctgag tacgatggag agctggttag ccaactcaat
     1021 ggggcgagcg cgcttcatta cggttttgct ggcagttttc gcttctgtgg ctttgatgct
     1081 tgcatcggtc ggcgtctacg gtgtgatggc atatgcggtc gcgcagcgca accaggagat
     1141 aggtatccgc atggctttag gcgcacaaac gaaagatgta ctgatgcttg tgattagaga
     1201 gggtatggca ctggcgctga tcggcatcgc gattggaatg ctggcggcgt tcgtgctgac
     1261 aaggtggatg gaaactttgt tgttcgaggt tcgcccgact gatccgttga cttacaccat
     1321 aattgcagca gtgttggcgc tggtgacact catttcgtgc tggataccgg cgcggcgggc
     1381 ggcgaaggtc gatccgctga ttgcactccg ctcaattggc gcttaagtag tgcgcctgca
     1441 gaaatgggag taatgggagt aatgggagag atgggaaata gaaaaaatgt tcttccaccc
     1501 tttc
//
LOCUS       DATDHO010000636         1835 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_29853, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000636 DATDHO010000000
VERSION     DATDHO010000636.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1835
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_29853"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(107..907)
                     /locus_tag="VIY07_12180"
     CDS             complement(107..907)
                     /locus_tag="VIY07_12180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6382547.1"
                     /translation="MRLERKTAIVIGAGQGPGEGMGNGRATALRFAQEGAKVMAVDRD
                     LGSAAETVSMVKQAGGDCVAFEADVTKEATLAAAIAAAQKRWGRIDILHYNVGVSIAG
                     GDAPLLELTEEAFDRISAINLRGAIMACKHVIPIMRQQRAGAITMISSLAALEKYPYV
                     AYKATKAAMIAFAKQVAIQNAEYGIRANVILPGLMDTPMAVDTRVRVSGKSRAEVAAE
                     RDARVPLRRKMGTAWDVANAALFLASDEANFITGVALLVDGGAALNIG"
     gene            complement(948..>1835)
                     /locus_tag="VIY07_12185"
     CDS             complement(948..>1835)
                     /locus_tag="VIY07_12185"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6382548.1"
                     /translation="GANGPMIVVGQAVIGPITAHYHNLDLRLKSMDAQRVVVHALSLN
                     PPMVYWADNALGLRLARLVNDAMSEANRAHPDRFVALATLPLQDPEAAVIEAERAVTE
                     LGCRGIYLGTNVRGKELSDPSFLPVFERINALEAPIFLHPFNVIGSQRLTSYYLHNLL
                     GNPFDTAVAAANLIFSGLLDRFPKLNICLPHAGGAFPYLIGRLNHGWKVREECRALKK
                     PPLSYLRRFTYDTISHAPEALRYLIDLVGADRVMLGSDYCFDMGYERPVKVVTALKLS
                     SNDQEKILGGNAKKLLQLR"
BASE COUNT          356 a          538 c          568 g          373 t
ORIGIN      
        1 ggtatttgcg ttccagcgat cggacaggcc gacgcgacat agagctttgg aaatcttcct
       61 cgtgttgtcg tttgacgaga gcgatacgtc cagagttgct gtgagcctag ccgatattga
      121 gcgcggcgcc gccgtcgacg aggagcgcga cgccggtgat aaaattggcc tcgtcggagg
      181 ccaggaacag cgccgcgttg gccacgtccc aggcggtgcc catcttgcgc cgcagtggca
      241 cgcgggcatc gcgctccgcc gcgacctcgg cgcggctctt gccgctcacc cggacgcgcg
      301 tgtcgaccgc catcggcgtg tccatcagac cgggcaggat cacgttggca cgaatgccgt
      361 actcggcgtt ctggatcgcc acctgcttag caaaggcgat catcgccgcc ttggtcgcct
      421 tgtaggcgac ataaggatat ttctctaacg cggcaagtga ggagatcata gtgatggcgc
      481 cggcgcgctg ctgtcgcatg atcgggatga cgtgcttgca ggccatgatc gcaccgcgca
      541 gattgatagc gctgatgcgg tcgaaggcct cctcggtgag ctcgagcagc ggcgcatcgc
      601 cgccggcgat gctgacgccg acgttgtaat gcagaatgtc gatgcggccc cagcgcttct
      661 gcgccgctgc tatcgctgca gcgagcgtcg cttccttagt gacgtcggcc tcgaaggcga
      721 cgcagtcacc gcccgcctgc ttgaccatcg acaccgtctc cgccgccgag ccaaggtcgc
      781 gatcaacggc catgaccttg gcaccctcct gcgcgaatcg cagcgccgtg gcacggccat
      841 tacccattcc ctcgcccgga ccctgaccgg caccgatgac gatggcggtt tttctttcta
      901 gacgcatggt ggtgggctaa cccatagggc atcctcgcgg taagacttta cctgagctgg
      961 agaagtttct tcgcattgcc tccgagaatt ttctcttggt cattggaact tagcttgaga
     1021 gcggtcacca cttttaccgg gcgctcgtag cccatatcga agcaatagtc gcttccgagc
     1081 atgacgcggt cagctccaac gaggtcgatg agatagcgca gcgcctccgg cgcgtggctg
     1141 atcgtatcgt aggtgaagcg tctgagataa cttaacggtg gctttttcag cgcgcgacat
     1201 tcctctcgga ccttccaccc gtggttgaga cggccgataa gatagggaaa agctcctccg
     1261 gcatgtggca ggcaaatgtt gagcttggga aatcgatcga gaagtccgct aaagatcaag
     1321 ttggcggcag cgactgcggt atcaaacgga tttcccagaa ggttatgcag gtagtagctt
     1381 gtgagccgct gggagccgat gacattaaag ggatggagaa agatcggggc ttccagagca
     1441 ttaatccgct cgaagaccgg caggaatgaa gggtcggaca gctcttttcc ccgaacgttg
     1501 gtgccgagat agatgccgcg gcaaccgagc tctgtgacgg cgcgctccgc ttcaatgacg
     1561 gccgcttcgg gatcttgcag gggaagggtt gcgagcgcca cgaagcggtc tggatgcgcc
     1621 cggttcgctt cggacatcgc gtcattgacg agcctcgcaa gtcgcaaacc gagagcattg
     1681 tccgcccaat agaccatcgg cggattgagc gagagagcat gaaccactac cctttgcgcg
     1741 tccattgatt tcagccgtag atcgagattg tggtagtgcg cggtgatggg cccgattacc
     1801 gcctgaccta cgacgatcat cggtccattc gcacc
//
LOCUS       DATDHO010000637         9775 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_75949, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000637 DATDHO010000000
VERSION     DATDHO010000637.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 9775)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9775)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9775
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75949"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="VIY07_12190"
     CDS             <1..350
                     /locus_tag="VIY07_12190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2182 domain-containing protein"
                     /protein_id="HEY6382549.1"
                     /translation="AGAYQFSGLKHACLTRCQQPFPFFFVNWATTPAGVFRLGLKQGA
                     YCLGCCWAMMLVMFAVGLMNVIWMAVLGIVMATEKMLSGRSFTYAVGAALIILGAGIV
                     LMAVVAHWPMRTI"
     gene            383..994
                     /locus_tag="VIY07_12195"
     CDS             383..994
                     /locus_tag="VIY07_12195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1326 domain-containing protein"
                     /protein_id="HEY6382550.1"
                     /translation="MTESWTLKGELALSCSCTVFCPCVLSLGEHPPTESRCQTWSGIR
                     IDDGHFDSVDLSGIKVGLMMDLPGIMSRGNWTAALFVDEKASALAVKGLTRIFTGRVG
                     GTTHLLSILVGQFLGVRQVPITYETQGETRIVRIEKYVDGAITPIRGKEAGKNVTIRN
                     SEYWIGSDIIVARAEKSRFRGFGRNWNLAGRSAEIVKLDWGNG"
     gene            995..1681
                     /locus_tag="VIY07_12200"
     CDS             995..1681
                     /locus_tag="VIY07_12200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEY6382551.1"
                     /translation="MTEIERIRAFTVHVFTATGAALALLALILATGGHWAGMFLCLGL
                     ALVIDGLDGPMARAFDVQNLLPRWSGDTLDLVVDFTTYVFVPAYAIAASGLLPQFLAI
                     PAGIVVVISGALYFADREMKTRDNYFRGFPAVWNLAAFYLYLLEPPEWAAALAILVLA
                     GLSFAPIRFLHPLRVKHWRKINVSLLALWAALAFVAVIEDLSPSIYVTVPLSLIAVYF
                     LVAGLLRSPA"
     gene            1710..2447
                     /locus_tag="VIY07_12205"
     CDS             1710..2447
                     /locus_tag="VIY07_12205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010912328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6382552.1"
                     /translation="MSRPVLLIAGGSRGIGAATAKLAGGRGYNVAVNYKTNSNAAAGV
                     VDAVKRAGGEAVAIQGDMAQENDIERVFDTAGDTFGSLSHFVHSSGIIGDGSRLDEVS
                     TKTIREVLELDTFGALLCLRACVRRMSTRHGGKGGAVVMLSSMAAPLGGANECVWYAA
                     AKAGVDSMVIGVSREVAKEGIRVNAVTPGVIDTDIQPPGRIERIMPMLPMGRAGQADE
                     VAEAVLFLLSDGASYINGANLRVSGGR"
     gene            2537..3514
                     /locus_tag="VIY07_12210"
     CDS             2537..3514
                     /locus_tag="VIY07_12210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HEY6382553.1"
                     /translation="MVAAVRVHKPGGPEALTYEDAEIPAPGQGQIKIKQHASGVNFID
                     AYFRMGMYPSPVGLPFIAGNESAGEVIAVGPGVTDVKVGDRVAFVGPLGGYAAERLVP
                     ADRAVKLPDNISYEQAAGMMLKGMTVQYLLNRTYKVEKGTVCLIHAAAGGVGLIACQW
                     ANYLGATVIGTVGSKEKAELAKKNGCHHTILYRDEDFVARVKEITSGKLCDVVYDGIG
                     KSTFPASLDCLRPLGYFVSFGSASGQIDAFNINILQTKGSLFATRPTLNNYVAKREDL
                     MTTAADLFKVVGSGAVKIPINQKYPLKDAAKAHKDMEGRETTGSTILIP"
     gene            3522..3701
                     /locus_tag="VIY07_12215"
     CDS             3522..3701
                     /locus_tag="VIY07_12215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382554.1"
                     /translation="MNPRAVAVSALLATANVSYAGAAVILTQTVQAKAMPLGNETEMT
                     DEERAILGRWLRDLP"
     gene            3698..4408
                     /locus_tag="VIY07_12220"
     CDS             3698..4408
                     /locus_tag="VIY07_12220"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HEY6382555.1"
                     /translation="MTDGAKPFGVVATFVIGTIALLVGQLSGIAALSGWYGLNLKEVG
                     ALSEQGGAIVLFIFVSAPVQVALLALAASHKGSIAEYLGYKLPRRGELVAAVLVLAAL
                     IIVGDTVSWLAGRHIVDRFQSDIYQAAKSANLLPLLLIAITVLIPIGEETLFRGFLFR
                     GWLRSSHDAWPVILITAAIFAIIHVQYDWFLIAQVFIFGVFFGWVRWATGSTILTMLL
                     HALVNIEGMIETMLAAGS"
     gene            complement(4415..5092)
                     /gene="bioD"
                     /locus_tag="VIY07_12225"
     CDS             complement(4415..5092)
                     /gene="bioD"
                     /locus_tag="VIY07_12225"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: protein motif:HMM:NF024891.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HEY6382556.1"
                     /translation="MASYFVTSTGTDIGKTFVTAALVRYLRESNQPVDALKPVVSGYD
                     SSVAQTSDPAVLLTALGRPVTADGVDRIAPWRFRAPLAPDLAAAREGRSIDFDKVVEF
                     SRLAINAAKGPLFIEGVGGIMVPLNGRRTVLDWMTALDVPVLLIVGGYLGTISHTLTA
                     LDVLRQRKLTIAAIIVSEGDRDTVELDDTVASIERFAAGVEVIGLPRLPAGINHHPAI
                     ARIAALL"
     gene            complement(5097..6248)
                     /gene="bioF"
                     /locus_tag="VIY07_12230"
     CDS             complement(5097..6248)
                     /gene="bioF"
                     /locus_tag="VIY07_12230"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041535761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HEY6382557.1"
                     /translation="MRSLDAFAEGKLDELRRRHLYRALDETLREDGIWVERDGRKLLS
                     FSCNDYLNFTQHAEIKRAAIAAIEEYGAGSGASRLVTGNHPLYAQLESRLARLKRTEA
                     ACVFGSGYLANTGIIPVLVGRDGLVLVDELSHACIHAGAHLSRGAVLTFRHNDVGHAR
                     SLLAAHRGGHDRVMIVSDGVFSMDGDLAPLADLLAVANEYDAWLMSDDAHGIGVVGGG
                     YGSSFAGSSHVPVPLQMGTLSKAIGSYGGYLCASASVIDLMRNRARTLIYSTGLPPAC
                     VAAAVAALDLIEREPAYAARPVQKAKMFTKRAGLPAAQSPIVPVLIGDEENALAASRL
                     LERHGYLAVAIRPPTVPPGTARLRLTFTAQHPDDHVERLADIVREKILA"
     gene            6307..7596
                     /locus_tag="VIY07_12235"
     CDS             6307..7596
                     /locus_tag="VIY07_12235"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEY6382558.1"
                     /translation="MTRRTRKNSLLPGWYDAGLEHIWLPYAQMKTVPSPLPVVRTQGA
                     RIVLADGRELIDGIASWWTACHGYNHPHIRQAVEEQLALMPHVMFGGLAHEQAFRLAQ
                     RLTTLLPGDLSRVFFSDSGSVAVEVAIKMATQYWINKGQPGKSRLIAFKGAYHGDTTG
                     AMALSDPESGMHGTFSSLLPKHQIADLPEDDAATAALEKLLAASNSTIAGMIVEPLVQ
                     GAGGMKFHDAAVLQRLRALADRYDALLIFDEIFTGFGRTGSFFACEQANVVPDIITLS
                     KALTGGTLPLAATIASGKVFDAFWADEQAKALMHGPTYMANALACAAANASLDLFEQE
                     PRLRQVADIGLAMERELAPCRDFSRVKNVRVKGAIGVVELDRVDDLDGLRARFVEGGV
                     FIRPIGNIVYLTPAFTITAAELKILTDAVVKVVRDLK"
     gene            complement(7611..8954)
                     /gene="rimO"
                     /locus_tag="VIY07_12240"
     CDS             complement(7611..8954)
                     /gene="rimO"
                     /locus_tag="VIY07_12240"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HEY6382559.1"
                     /translation="MRNPGAKPDATAPRVSFVSLGCPKALVDSERIVTRLRAEGYELS
                     RQHKGSDLVIVNTCGFLDSAKAESLAAIGNALNENGKVIVTGCMGAEPESISAAYPDV
                     LAITGPQQYESVVEAVHKALPPKHDPFLDLVPPEGIKLTPCHYAYVKISEGCNNRCSF
                     CIIPRLRGDLVSRPAADVLREAEKLVAAGVKELLVISQDTSAYGLDIKYAASRWRDRE
                     VRAKFIDLSRALGEFGVWVRLHYVYPYPHVDEVIPLMADRKVLPYLDIPFQHASPDVL
                     KRMRRPAAQEKTLERIARWRDQCPDLTLRSTFIVGFPGETESDFDMLLEWLEAASLDR
                     VGCFKYEPVKGAAANEMAAPVPDDVKEQRWHRFMQTQQTISARRLKRKVGTRQKVIVD
                     EIGPTVAKGRSMADAPEIDGEVYVASRRPLRVGEIATVKIERADEYDLHGTAVGF"
     gene            complement(9475..>9775)
                     /locus_tag="VIY07_12245"
     CDS             complement(9475..>9775)
                     /locus_tag="VIY07_12245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382560.1"
                     /translation="FKLKILDYIFGRVPIAAIESALKGIPERLKPEFLVAEDLSTLVS
                     KIIETIDDTERLNLMQTRAFELAEDVFNWEVNGRRFLEELKHRRAPSGMPSLPVP"
BASE COUNT         1882 a         2824 c         3014 g         2055 t
ORIGIN      
        1 ccgccggtgc ttaccaattc tccggactta agcacgcatg cctgacgcgg tgccagcagc
       61 cgtttccctt cttttttgtc aactgggcaa ctacgcccgc aggggttttt cggctggggc
      121 tgaagcaggg cgcctactgc ctcggctgct gctgggcgat gatgcttgta atgttcgcgg
      181 tcggcttgat gaacgttatc tggatggctg tactaggcat tgtcatggcg accgagaaga
      241 tgcttagcgg acgaagcttt acttatgcgg tcggggcggc tctcatcatt ctcggcgccg
      301 ggattgttct catggccgta gtcgcccatt ggccgatgcg aacaatttga gtgcatggca
      361 aaataagcaa gggagtattg cgttgacgga aagttggact ttaaagggcg aactcgcgtt
      421 gtcttgcagc tgcaccgtgt tttgtccttg tgtgctgtcg ttgggcgagc atccgccgac
      481 tgaaagtcga tgccaaacct ggtccggcat tcgtatcgac gatggacatt tcgattctgt
      541 tgatctttcc ggcatcaagg taggcctcat gatggatttg ccaggcatca tgtcacgagg
      601 caattggacg gcggcgctat ttgtcgatga aaaagcctcc gcgcttgcgg tcaagggatt
      661 aactcggatt ttcaccggtc gcgtcggcgg caccacacat ttgctgtcga tcctggtcgg
      721 gcagtttctg ggcgtgcgtc aggttcccat cacctacgag acgcaaggcg agacgcgcat
      781 tgtacgcatc gagaaatatg tggatggcgc aatcacgccg atccgcggca aggaagccgg
      841 caagaatgta acaatacgaa acagcgaata ctggatcggt tctgatatca tcgtcgcgcg
      901 ggccgagaag tcccgatttc ggggctttgg ccgcaactgg aacctggcgg ggcgatccgc
      961 cgagatcgtc aagctcgact ggggcaatgg ttaggtgact gaaatcgagc gcatccgcgc
     1021 ttttacggtc catgttttca ccgcaaccgg ggcggcgctt gcgttgctcg cgctgatcct
     1081 ggctaccggt gggcattggg cgggaatgtt tttgtgtctc ggcctggcgc tcgtgatcga
     1141 cggcctcgac gggccgatgg cgcgcgcttt cgacgtgcag aatctgctgc cccgatggtc
     1201 gggcgacacc ctcgatctgg tggtggattt tacgacttac gtcttcgttc cggcctatgc
     1261 catcgccgcc agcgggctgc tgccgcaatt tcttgcgatt cccgccggca tcgtcgtggt
     1321 catcagtggc gctctctatt tcgccgaccg cgagatgaaa acgagggaca attattttcg
     1381 cggatttccc gcagtctgga atcttgcggc attttatctg tacttgctcg agccgccgga
     1441 gtgggccgcc gccttggcaa tcttggtcct tgccggtctg agtttcgcgc cgatcaggtt
     1501 tctccatcct ttgcgcgtga agcattggcg aaagattaat gtctctctgt tggcgctatg
     1561 ggcggcgctg gcgttcgtgg cggttattga ggatctgtcg ccgagcattt atgtaaccgt
     1621 gccgctgtca ttgattgcgg tgtatttcct tgttgctggc ttattgcgct cgccagcgtg
     1681 aattgccaag cgaaatccgg gagtaaacca tgtctcgacc agtcctactt atcgccggcg
     1741 gcagccgggg aatcggagct gccactgcga agcttgcggg cggtcgcggt tacaacgtgg
     1801 cggtcaacta caagaccaat tcgaatgctg ctgccggtgt cgtcgacgct gtaaagcgag
     1861 cgggcgggga ggcggtcgcc atccagggtg acatggcgca ggagaacgat atcgagcgtg
     1921 tattcgacac cgccggcgat acctttggat cgctcagcca ttttgtgcac agttccggca
     1981 ttatcggcga cggttcgcgg ctggacgagg tcagcacgaa aacgatccgc gaggtgctcg
     2041 agctcgatac attcggtgcg ctgctttgcc tgcgggcctg tgtgcgccgg atgtcgacca
     2101 ggcacggcgg caagggcggc gccgttgtga tgttgtcgtc gatggcggcc cctctcggcg
     2161 gcgccaatga gtgtgtctgg tatgcggcag ccaaggccgg cgttgattcc atggtaattg
     2221 gggtttcgcg cgaggtcgcg aaggagggta ttcgcgtcaa cgcagtcaca ccgggtgtca
     2281 ttgacaccga tattcagcct cccggacgca tcgagcgcat catgcccatg cttccgatgg
     2341 gcagagccgg gcaggccgat gaagtcgcgg aagccgtgct gtttctgctc tcggatggcg
     2401 cctcttacat caatggcgcg aacctgcgcg tgtcgggcgg acgctgatcc gccttgcgct
     2461 cggcgtttgg ctgcctatta tcgccgccga aattccatcg ctaaaaacaa gcccaaacgt
     2521 catcaaggag tgaaacatgg tcgcggcagt gcgcgttcac aaacccgggg gtcccgaggc
     2581 tctaacatac gaggacgctg agattcccgc gccgggccaa ggccagatca agatcaaaca
     2641 gcatgccagt ggcgtcaatt tcatcgatgc ctatttccgg atgggcatgt atccgtcccc
     2701 tgtcggcctg cccttcatcg cgggcaacga aagtgccggc gaagtcatcg cggtcggccc
     2761 cggcgtgacc gacgtcaagg ttggggatcg ggtggccttc gtcggcccgc tgggcggcta
     2821 tgcggccgag cgcctggtgc cggccgatcg cgcggtgaaa ctgcccgaca atatttcata
     2881 cgaacaggct gccggcatga tgctcaaagg catgaccgtg cagtatctgc tcaatcgcac
     2941 ttacaaggtc gagaaaggca ccgtctgcct gatacacgct gcggccggcg gcgtcggcct
     3001 catcgcctgc cagtgggcaa attatcttgg tgcgacagtt atcggcaccg tcggctcaaa
     3061 ggaaaaggcc gaacttgcca aaaagaacgg ctgccatcac acaatccttt atcgagatga
     3121 agattttgtt gcgcgggtga aagagatcac cagcggcaag ctctgtgacg tggtctacga
     3181 cggcatcggc aagagcacct tcccggcttc gctcgattgt ctgcgtcctc tgggctattt
     3241 cgtgagcttt ggcagcgcgt cgggacagat tgacgccttc aacatcaaca tcctgcagac
     3301 caagggttct cttttcgcaa cgcggccgac gctcaataat tacgtcgcca agcgcgagga
     3361 tctgatgaca accgcggccg acctgttcaa ggttgtcggt tccggcgcgg tgaaaattcc
     3421 gatcaaccag aagtatccgc tcaaggatgc cgcaaaggca cacaaggaca tggaaggccg
     3481 cgagaccacg ggttcaacca ttctcatacc ctagtcgtcg catgaaccca cgcgcggtgg
     3541 cggtaagtgc tctgctcgcc accgcgaatg tctcgtatgc cggcgctgcc gtgattctta
     3601 cccagacggt tcaggctaag gccatgcccc tcggcaacga gaccgagatg actgatgagg
     3661 agcgtgcaat acttggccga tggctgaggg atctcccttg accgacggcg cgaaaccgtt
     3721 tggcgtcgtg gccacgttcg tcatcgggac gattgcgctc cttgttggtc aactctccgg
     3781 gattgcagca ctaagcggat ggtatggcct caacctgaaa gaggtcggcg ccctgagcga
     3841 acagggcggc gcaatcgtac tttttatctt tgtctccgcg ccggtgcagg tggcgctgct
     3901 ggcattggcg gcaagccaca aaggaagcat cgcagagtac cttggctaca agctgccccg
     3961 acgcggcgaa ttggttgccg ccgtactggt gctcgctgct ctgattatcg tgggcgacac
     4021 cgtgagttgg ctcgcgggcc gtcacatcgt cgatcgcttc cagagcgaca tctaccaggc
     4081 cgccaaaagt gcaaacttgc tgccgctgct gctgatagca attactgtcc tgattccgat
     4141 cggtgaagaa actcttttcc gcggatttct gtttcgcgga tggctgagat cctcacacga
     4201 cgcctggcca gtcatactca tcacggccgc gatctttgcg atcattcatg ttcaatacga
     4261 ctggttcctc attgcccagg tattcatttt cggcgtgttc tttggatggg tgcgatgggc
     4321 gacgggttcg accattttga ccatgctcct gcacgcgctg gtgaatattg agggcatgat
     4381 cgaaacgatg ctggctgccg gcagctgacg cggcttagag cagcgccgcg atacgggcga
     4441 tagccgggtg gtgattgatg ccggccggca atctgggaag cccgatgact tcgacgccgg
     4501 ccgcaaatcg ttcgatgctc gccaccgtgt catctagctc gaccgtgtct cggtcgcctt
     4561 cgctgacaat gattgcagcg atggtcagct ttcgctgacg caacacatcg agtgcggtga
     4621 gcgtgtggct gatggtgccg agatagccgc cgacaataag caacaccgga acatcaagtg
     4681 ccgtcatcca gtcgagcacg gtgcggcggc cattgagagg gaccatgatg ccgccaacgc
     4741 cctcgataaa gagcggtcct tttgcggcat tgatcgcgag gcgactgaat tcgaccacct
     4801 tgtcaaaatc gatgctgcgc ccttcacggg cagcggcgag atcgggcgcc agcggagcac
     4861 gaaagcgcca gggtgctatc cggtcgaccc cgtcagcggt aaccggccgg ccaagcgcgg
     4921 tcagcagcac cgccggatcg cttgtctggg caacggagga gtcatagcca ctgacaaccg
     4981 gtttcagtgc atcgactggt tggtttgact cgcgcaggta gcggacaagc gccgcggtga
     5041 cgaatgtttt tccgatatcg gtgccggtcg aggttacgaa gtaggacgcc acggttttac
     5101 gccagtattt tttcgcgcac gatgtcggcc aaccgttcga cgtgatcgtc agggtgttgc
     5161 gccgtaaatg tcagtcgaag gcgcgccgtg cctggaggga ctgtaggcgg acggatggcg
     5221 acggccagat agccatgacg ttccagtaaa cgcgacgcgg ccagtgcatt ctcttcgtcg
     5281 cctatcagaa ctggcacgat cggactctgc gctgcgggca ggcccgcgcg cttcgtgaac
     5341 atctttgcct tctgcaccgg ccgcgccgca tacgcgggct cgcgctcgat caaatccaat
     5401 gctgcaacgg cagccgccac gcaggcaggt ggcagtccgg tcgagtagat caacgtgcgc
     5461 gcgcgattgc gcatcaaatc gatcacggat gccgatgcgc agaggtaacc gccgtacgag
     5521 ccgatcgcct tcgacagggt gcccatttgc agcgggacag gcacatgcga gctccccgcg
     5581 aaactcgacc catagcctcc gccgaccacg ccgatgccgt gggcatcatc cgacatcagc
     5641 caggcgtcgt attcgttcgc aacggcgagc aagtcagcga ggggcgcgag atcaccgtcc
     5701 atcgaaaaca cgccgtcgct cacgatcatg acgcgatcgt gcccgccgcg atgcgccgcc
     5761 aggagcgaac gggcatgccc gacatcgttg tggcgaaaag tcaggactgc gccgcgggac
     5821 aagtgcgctc cggcgtgaat acaggcgtgc gacagttcgt cgaccaggac gagcccgtca
     5881 cgcccgacca gcacaggaat aattccggtg ttggcgaggt agccggagcc aaagacgcag
     5941 gcagcttcgg ttcgcttgag gcgcgcgaga cgggattcaa gctgggcgta gagaggatga
     6001 ttgccggtca ccagccggga cgcgccggac cccgcaccat attcctcgat agcggcgata
     6061 gctgcccgct ttatctcggc atgctgggtg aaattgagat agtcgttgca tgagaatgac
     6121 aggagcttac ggccgtcacg ctcgacccag atgccatcct cgcgcagcgt ttcatccagc
     6181 gcgcgataga ggtggcggcg cctgagttcg tccagcttgc cttcggcgaa ggcgtcgagt
     6241 gagcgcatgg tgaccttgcc agctagcacg ccagatgctt agcacgaacg gaccggggac
     6301 atgtaaatga cgcgccgcac gaggaaaaac agcctgctgc cgggttggta cgacgccgga
     6361 ttggagcaca tctggctgcc ttacgcgcag atgaaaacgg tcccgtctcc attgccggtc
     6421 gtgcgcaccc agggcgcccg gattgtgctg gcagatgggc gagagctgat cgacggcatc
     6481 gcgagttggt ggaccgcatg ccatggctat aaccatccgc acatccggca ggccgtagag
     6541 gagcaactgg ccttgatgcc gcacgtcatg ttcggtgggc tcgcgcacga acaggcgttt
     6601 cggcttgcgc aacgtctcac cacgttgctg ccgggcgatc tgagccgcgt gttcttctca
     6661 gattccggtt cggtcgccgt cgaagtcgca atcaagatgg cgacgcaata ttggatcaac
     6721 aagggacaac ccgggaaatc tcggttgatt gcattcaaag gcgcctatca cggcgatacc
     6781 accggcgcga tggcgttgag cgatccggaa tcgggcatgc acggcacgtt ttcgagcttg
     6841 ctgccaaagc accagatcgc ggacctgccg gaagacgatg cagcaacggc ggcgctcgaa
     6901 aagctgcttg ccgcgtcgaa cagcacgatc gccggaatga tcgtcgagcc attggtgcaa
     6961 ggcgccggcg gcatgaaatt tcacgatgcc gcggtacttc agcgcctgcg cgcgctggct
     7021 gatcgatacg atgcgctgct gatctttgac gagatcttca ccggcttcgg ccgcacggga
     7081 agtttttttg catgcgagca ggcaaatgtt gtccctgaca tcattacact atcaaaggcg
     7141 ctgaccggcg gcacgcttcc gctcgctgcg accatcgcat caggcaaggt gttcgatgcg
     7201 ttttgggcgg acgagcaagc caaggcattg atgcacggac cgacatatat ggcgaatgcg
     7261 cttgcatgtg cggctgccaa tgcctcgctt gacctattcg agcaagagcc ccgcctgcgt
     7321 caggtggccg atattgggct cgcaatggaa cgcgagctgg caccctgccg tgatttttcg
     7381 cgcgtcaaga acgtgcgcgt gaagggcgcg atcggtgtcg tcgagctcga ccgggtcgat
     7441 gatcttgatg gcttgcgcgc gcgcttcgtt gaggggggcg tcttcatccg ccctatcgga
     7501 aatatcgttt acctgacccc ggccttcacg atcaccgctg ccgagctcaa aattctgacc
     7561 gatgcggttg tcaaagtcgt tcgcgacttg aagtaatccg gtggggacga tcaaaatccg
     7621 accgcggtcc cgtgtagatc gtattcgtcg gcacgctcta ttttgactgt ggcaatttca
     7681 ccgacgcgca acggccgacg gctcgccacg tagacctcac cgtcgatctc cggcgcgtcc
     7741 gccatcgagc ggcctttggc gacggtcgga ccaatctcgt cgacgatcac tttctggcga
     7801 gtgccgacct tgcgtttcaa ccggcgggcc gaaatcgtct gctgggtctg catgaagcga
     7861 tgccagcgct gctccttcac atcgtcagga accggtgcgg ccatctcgtt ggcggcggcc
     7921 cctttcaccg gctcgtattt gaagcatccg acccgatcga gcgatgccgc ttcgagccat
     7981 tcgagcagca tgtcgaaatc tgattcggtt tccccgggaa atccgacgat gaaagtcgag
     8041 cgcaacgtga gatccgggca ttgatcgcgc cagcgcgcga tgcgctccaa tgttttctcc
     8101 tgtgccgccg ggcggcgcat tcgtttgagg acgtcggggg aggcgtgctg aaaggggatg
     8161 tcgaggtaag gcaacacctt tcgatcggcc atcagcggga tgacttcgtc cacgtgaggg
     8221 tagggataaa cgtagtgcaa ccgcacccag acgccgaact cgccaagggc gcgcgaaaga
     8281 tcgatgaact tggcgcgcac ctcgcgatcg cgccatctgc tcgccgcgta tttgatgtcc
     8341 aacccatagg ccgaggtatc ctgcgagatc accagcagct ccttgactcc cgctgccacg
     8401 agtttttcgg cctcgcgcag aacgtcggcc gccgggcgcg ataccaagtc gccgcgcagg
     8461 cgcgggatga tgcagaatga gcagcggttg ttgcagcctt ccgaaatttt cacataggca
     8521 tagtggcacg gcgtcagctt gatgccttcc ggcggcacca ggtcgagaaa cgggtcgtgc
     8581 ttcggcggca gcgctttatg gacggcctcg accacgctct cgtattgctg tgggcccgta
     8641 atcgccagga catcaggata ggcggccgaa atgctttccg gctccgcgcc catgcatccg
     8701 gtgacgatga ccttgccatt ttcgttgagc gcgtttccga tcgctgcgag cgactcggcc
     8761 ttggcgctgt caagaaagcc gcatgtgttc acaatgacaa ggtcggaacc cttgtgttgc
     8821 cgcgacagct catagccctc cgcgcgcagg cgcgtgacaa tgcgttcgct gtcgaccaat
     8881 gctttcgggc agccaagcga gacaaagctc actctaggcg ctgtggcgtc gggttttgca
     8941 ccaggattac gcatggaaca gggggctagc cgccatgtgc ggcaagatca aggggcctca
     9001 tccatagccc tcctgagctt attggcggat tgggactatc ggcgttatcg tgcacccggg
     9061 gcagggcatt gcgcatgaaa cgaacgggca ttctgctagg gctagtctct gtcggctttg
     9121 tggtcgtttc gcaggcggca ctcgccgcgg aggcaaaggg ttcgtcctgg cgctacgacg
     9181 cgcacagccc tgagccgccg tttccgcgca gcaagcgcgc cgagtcgatc tgggcgtcgg
     9241 acgggtgctg gagcgactgc ggctcctact gcgcttgggg tttagccggc tgccttaaag
     9301 aagattctca aggtcgctgc ttgaagctca ccgacaactg cgatcgctac tgccaacggg
     9361 catgccgaac cagaggcggc ccgctgcttc cgatcgaatt cccttgggat taatttgcgg
     9421 ataggaacgt ctgcataaaa tatggtcacc aaacacaaga cctgacacta actgttatgg
     9481 gacgggtagg gatggcatcc ctgatggtgc gcgcctgtgt ttcaattcct ctaaaaatcg
     9541 acgcccgttg acctcccaat tgaatacatc ctcggccagc tcgaacgcgc gggtctgcat
     9601 cagatttagc cgctcggtat catcgatggt ctcgatgatc ttgctaacga gcgtactcag
     9661 gtcttcggcc accagaaact ccggctttaa tcgctcggga attcccttga gtgcggattc
     9721 gatggccgct attggcacgc ggccgaagat gtagtccaaa attttgagtt taaat
//
LOCUS       DATDHO010000638         1815 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_376989, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000638 DATDHO010000000
VERSION     DATDHO010000638.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376989"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..876)
                     /locus_tag="VIY07_12250"
     CDS             complement(<1..876)
                     /locus_tag="VIY07_12250"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6382561.1"
                     /translation="MAESSTPFIGRGVKPHKTSRFLTGGGVYVNDIRLPNILHAALAR
                     SMHAHAHIRSIDTEQALRLDGVAGVWTGGDIKDRIALFPESFEIHPRPWLEGVKPILQ
                     GPRPAALAQRKVHYVGEPVAIVVAEDRHRAEDAVDAIVVEYEPLPVIVDPDEALKAGA
                     IRVHDESQDNVVFRFTVDKGNIDQALRDAPYRLRERFRHHRYCAAPLEGRGVVAWVEP
                     KTNILTVWSSTQMPHLVRRQIAAQLNLSEETVRVIAPDIGGGFGPKVFVYPEEVLVPF
                     LAFQLGRPVKWIEDRR"
     gene            complement(921..1391)
                     /locus_tag="VIY07_12255"
     CDS             complement(921..1391)
                     /locus_tag="VIY07_12255"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6382562.1"
                     /translation="MAKLRHIALHTPDPEKTAEFYKRVFDMVEVGRTDSPLAKGIYLS
                     DGTINLAVLRFKTKEAADRNDGLGPVFGLHHFGFWVENPDETRRRLKEAGADYRFGRP
                     ETATTSFFEEKYKGPDAVMIDITEHGWVGAEPLPGNNSTTQEHPISAGQPLTAR"
     gene            1633..>1815
                     /locus_tag="VIY07_12260"
     CDS             1633..>1815
                     /locus_tag="VIY07_12260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382563.1"
                     /translation="MDSSSTELGPIGIWTAQLDYQPAAKAREAAVEFEQLGFGAIWFP
                     ESVGREALTHAALLLSV"
BASE COUNT          360 a          552 c          508 g          395 t
ORIGIN      
        1 ccgtcggtct tcgatccact tgaccggacg ccccaactgg aaagccaaaa aaggaaccag
       61 gacctcctcg ggatagacga aaaccttggg accgaacccg ccgccgatat ccggcgcgat
      121 cacgcgaacc gtctcttcgg aaagattcag ttgcgcggcg atctgccgcc gcaccaggtg
      181 tggcatctgc gttgacgacc acacggttag aatgttcgtt ttgggttcga cccacgcgac
      241 aacaccgcgg ccttccaatg gcgcggcgca atagcgatgg tgccggaagc gctcgcgcaa
      301 tctgtagggc gcatcgcgca aagcctgatc gatgttgccc ttgtctaccg taaagcggaa
      361 taccacgtta tcttgtgact cgtcgtggac tcgaatagcc cccgctttca gcgcttcgtc
      421 cggatccacg atcacgggca acggctcata ctcgacgacg atggcatcca ccgcgtcttc
      481 cgccctatgg cgatcttcag ccacgacgat ggccacgggc tcgcctacat agtgaacttt
      541 tcgttgggcc agagcggcag ggcgaggtcc ctgcaagatc ggcttcaccc cttccagcca
      601 cgggcggggg tggatctcga agctctcggg gaacagggcg attcgatcct tgatatcacc
      661 gccggtccaa actccggcaa ccccgtccag ccggagggct tgctcagtat cgatgctgcg
      721 gatgtgcgcg tgggcgtgca tgctgcgcgc tagagcagca tgcagtatgt tcgggagccg
      781 aatatcattc acatagacgc cgcctccggt gagaaagcga ctcgtcttgt ggggtttaac
      841 gccgcggccg atgaatgggg ttgagctttc cgccattcga agttgcctcg tgccgcgcct
      901 gagaaccggg ttttagatgg ctatcgcgcc gtcaacggtt gcccggcgct aattggatgt
      961 tcttgagtcg tggagttatt tcccggcagc ggctcagctc ccacccaacc gtgttcagtg
     1021 atgtcgatca tcacggcgtc gggtcctttg tacttctctt caaaaaaact ggttgtcgcc
     1081 gtctccgggc gaccgaagcg atagtctgcg cccgcctctt ttagtctgcg ccgcgtctcg
     1141 tctggattct ccacccaaaa cccaaagtga tgcaggccga aaaccggacc tagaccgtcg
     1201 ttccggtccg ctgcctcctt ggttttgaac cggagcaccg ccaaattgat tgtgccgtcg
     1261 ctcaaataga tccccttggc gagcggagag tcagtccgcc ccacctcgac catgtcaaaa
     1321 acccgcttgt aaaactccgc tgtcttctcc gggtccggag tatgcagtgc tatgtgtcgc
     1381 aacttggcca taacgatctc cttcttttgt tttgagcgct cctccaaccc gctgagtcag
     1441 gtgtctgcgg gaacgcctcg cctatagttg tcctaaaact actgcgaatc aaggacacgg
     1501 gtcaatcggg aaaagctgtt ggccgatcta gcaagcacgc ctttccttac cgctcccgtt
     1561 tggtagagta ttcagtaatc gacatcgcaa gccgcggaca ttcctgaagc cattcaagta
     1621 aaggagcact atatggactc ctcatcgacg gaactgggac cgatcggaat ctggacggca
     1681 cagctagatt atcagcccgc cgccaaggcg cgggaagccg ccgtggagtt cgagcagctc
     1741 gggttcggag cgatttggtt ccccgagagt gtcggtcgcg aggcgttgac tcatgccgca
     1801 ttacttctca gtgtc
//
LOCUS       DATDHO010000639         1668 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_75959, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000639 DATDHO010000000
VERSION     DATDHO010000639.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75959"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            175..1146
                     /locus_tag="VIY07_12265"
     CDS             175..1146
                     /locus_tag="VIY07_12265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I NDUFA9 subunit family protein"
                     /protein_id="HEY6382564.1"
                     /translation="MAAPSHYETLVTVYGGSGFLGRHVVRALAKRHYRIRVAVRRPEL
                     ANFLQPLGRVGQIHAVQANLRHAASVESAARDAHALINLVGILFERSRQRFDAVHAYG
                     AEQVALAANAHGARMVHVSAIGADANSSSAYARSKAHAEQLVLAAQPSTTIMRPSIMF
                     GPEDDFFNRFAGLACLSPALPLIGGGVTRFQPVFVGDVAAAIADAVDGKTRPGTIYEL
                     GGPDIRTFKELMQFVLATIERKRLLVTLPFPLAKAQATVLQYLPKPPLTPDQVESLRN
                     DNVVSQSAKDEGRTLQGLGMEPEPIEAIVPSYLWRFRKTGQFRKHTA"
     gene            complement(1149..>1668)
                     /locus_tag="VIY07_12270"
     CDS             complement(1149..>1668)
                     /locus_tag="VIY07_12270"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010659405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEY6382565.1"
                     /translation="VGALAYQVIKSYLFDIRIVCITLVLGGFVLLWVDRLNLKARYHE
                     ATGFPLPMYLGIGIIQCISMVPGVSRAGATIVGAMLFGADRRSAAEFSFWLAMPTMVG
                     AFAYEIYKSRGELALGGNIAVTAVGFAFSFIFGWIVVKTFLGYVQRHSFALFAWWRIL
                     LGAGGLAALYIV"
BASE COUNT          364 a          518 c          480 g          306 t
ORIGIN      
        1 gcgctagtac ctgaaactag tgcgtctacc aattccgcca cctgggcttg tcgggaccag
       61 atacggagcc gcttcccgct tgtcaatgaa gggcttatag ctctgtacac tcgttggccg
      121 atcctgtatt ggccggcttc aggcacccca cgtcggcgag aagcaagaaa gcgcatggcc
      181 gcgcccagcc actacgagac tttggtcacc gtatatggcg gctcggggtt tctcggccgg
      241 catgtagtgc gggccttggc caaacgtcac taccgcatca gggtggccgt gcgccggccc
      301 gaacttgcaa atttcctcca gccgcttggg cgcgtcgggc agatccatgc cgtgcaggcc
      361 aatctgcggc atgcggcgtc agtagaatcg gcggcccgcg atgcacacgc gctgatcaat
      421 ctcgtcggca tccttttcga gcgcagccgc cagcgtttcg acgcggttca cgcatacggc
      481 gcagaacaag tcgcgctagc ggccaatgcc cacggcgcgc ggatggttca tgtatccgcc
      541 atcggggcgg acgcgaattc atccagtgca tacgcccgat ccaaagcgca tgccgagcaa
      601 ctggttctgg cggcgcaacc ttcgactacg atcatgcggc catcgatcat gtttgggccc
      661 gaggatgatt tcttcaaccg ctttgccgga ctggcatgct tgtcgcccgc attgccgctg
      721 atcggtggcg gagtcacacg ctttcagccg gtgtttgtcg gcgatgttgc agcggcgatt
      781 gccgacgccg tcgacggcaa gacgcgtcca ggcacgatct atgaactcgg cgggccagac
      841 atcaggacct tcaaggaact gatgcagttt gtgctcgcta caatcgagcg caaacggctt
      901 ctcgtcacgt tgccttttcc tctggcaaag gcccaggcaa cggtgttgca gtatctcccc
      961 aagccgccgc tcacgcccga tcaggtcgaa tcgctacgca acgataatgt cgtgtcgcag
     1021 tccgcaaagg acgaggggcg aacgctgcag ggccttggaa tggaacctga gccaatagag
     1081 gcaattgtgc cgtcctacct ttggcgattt cgcaagacgg gacaattcag gaaacacacc
     1141 gcctagcttc atacaatgta cagtgcagcg agtccgccgg cgccgagcag gatgcgccac
     1201 caggcgaaca acgcaaagct gtgacgctgt acgtagccca aaaacgtttt cacgacgatc
     1261 cacccgaaga tgaacgagaa cgcgaacccg accgccgtca ctgcaatatt cccgccaagg
     1321 gcgagctctc cccggctctt gtagatttcg tatgcgaatg ccccgaccat tgtcggcatc
     1381 gccagccaga aagagaactc cgcagcagaa cggcgatcgg caccaaaaag catcgctccg
     1441 acaatggtgg cgccggcacg cgacacgccc ggcaccatcg aaatgcactg aataattccg
     1501 atgcccagat acatcggcag gggaaatccg gtcgcctcgt gatagcgcgc cttgaggttc
     1561 agccggtcaa cccaaagcag gacgaagcca ccgaggacga gcgtgatgca aacaatgcgt
     1621 atgtcgaaca aataggattt gatgacctga tacgcgagcg cgccgacc
//
LOCUS       DATDHO010000640         1739 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_75964, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000640 DATDHO010000000
VERSION     DATDHO010000640.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_75964"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            245..778
                     /locus_tag="VIY07_12275"
     CDS             245..778
                     /locus_tag="VIY07_12275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018070013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HEY6382566.1"
                     /translation="MNTAKAATSRIAPRLATPTDLGANATKDIAGALNALLADTFALY
                     LKTKNFHWHISGPHFRDYHLLLDEQSDQIFAMTDVLAERVRKLGGTTLRSIGDISRHQ
                     RIADNDAPYVDAEDMLAELRDDNQRFITAMRETHDVCEEHGDVATTSQLEIYIDEAER
                     RVWFLYEAGRQGDPTGH"
     gene            complement(800..1576)
                     /locus_tag="VIY07_12280"
     CDS             complement(800..1576)
                     /locus_tag="VIY07_12280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043461 - proton-transporting ATP synthase
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP12 family protein"
                     /protein_id="HEY6382567.1"
                     /translation="MSDIFTEIFENPPLDPTEAAQRAVRPTLRKRFFKRVHTGDSDKG
                     GVAIFLDGKPVLTPARRKFVAPAQALADAVAAEWRAQADVIDPARMPLTRLCNAVIDA
                     VVDAPAPVAEEVARYLRSDMLFYRAESPAALARKQSQAWDPVLAWVREKFGAQFVLTE
                     GLMFVSQQPEATAAARAAIPSGPWQLAAISSITTLTGSALLALALAHSAIEPDAAWLA
                     AHVDEDWQMSQWGRDELALERRAYRHGEFQAAVTVLKLAR"
BASE COUNT          378 a          526 c          511 g          324 t
ORIGIN      
        1 gccattgata tcaagccgga cgtttccaag atgcatgagg cgcgcgccag cctgttgcgc
       61 tcgctcggac gcgacgaaga agcacgtgca gcggatacat tggcggcgga actagcaata
      121 aagacccctg ccaaaaattc cggcagcgcc acaacatcct gattttttgc ttcacaggat
      181 cgcaatgaaa gcggcatagt gtggtccggg gtgcctcggg ggggaccaca cgaggaccat
      241 ttccatgaat accgcaaaag ctgctacctc gcggattgcg ccgcgccttg cgacaccgac
      301 cgatctcggc gccaatgcca ccaaagacat tgccggcgcg ctcaacgccc tgctggccga
      361 tacttttgct ctttatttga agaccaagaa ctttcactgg cacatcagcg ggccgcactt
      421 ccgcgactat caccttttgc ttgacgagca gtccgatcag atcttcgcaa tgaccgatgt
      481 gcttgccgaa cgcgtccgca agctgggcgg caccacgttg cgatcgatcg gcgatatatc
      541 gcgccatcag cgcattgccg ataacgatgc accttatgtc gatgccgagg acatgctggc
      601 cgaactgcgt gacgataatc aacgcttcat cacggcgatg cgcgagaccc atgacgtctg
      661 cgaggagcac ggcgacgtgg ctaccaccag ccaactcgag atctacatag atgaggcaga
      721 gaggcgcgtc tggtttcttt atgaggccgg ccgtcagggc gatccgacag ggcattaagt
      781 tcagccgatc aagccggact taccttgcaa gcttaagcac cgtcaccgcc gcctgaaatt
      841 ccccatggcg ataggcgcgg cgctcgagcg caagctcatc gcgaccccac tgcgacatct
      901 gccagtcctc atctacgtga gcggccagcc aggcggcatc gggctcgatc gctgaatgcg
      961 cgagcgcgag cgcaaggagc gccgatccgg tcaatgtcgt gatcgatgag atcgcagcga
     1021 gttgccacgg tccggaggga atggcggcgc gcgcggccgc agtcgcctcg ggctgctgcg
     1081 acacgaacat gaggccttcg gtcaggacaa actgtgcgcc gaacttttcg cgcacccagg
     1141 ccagtaccgg gtcccaggct tgcgattgct ttcgcgcgag cgcagccggc gattcggcac
     1201 gatagaacag catatccgaa cggagatacc tcgcgacttc ctccgcaacg ggagccggcg
     1261 cgtcgacaac cgcatcgatc acggcattgc agagacgcgt gagcggcatc cttgcgggat
     1321 cgatgacgtc ggcttgcgcc ctccattccg cggcgacggc atcggcgagt gcttgcgcgg
     1381 gtgcgacaaa ttttcgccgt gcgggcgtca gcacaggctt gccatcaagg aatattgcga
     1441 caccgccctt gtcggaatcc cccgtatgca ctcgtttgaa gaatcgtttg cgcagggtcg
     1501 ggcgaactgc gcgctgcgcc gcttccgttg gatcgagcgg cggattttcg aaaatctcgg
     1561 tgaaaatatc gctcatttga ccgtttgtgc gacgcaaaat aacaaaggaa cttatccagc
     1621 cctaaatgtt aatccgaagc cgcgaagtta agggccggaa tgccatcgtg acgccgcttt
     1681 cagggagcga aaaacttcac gcagacttgt ggttgatagg acccagccac gacggaagg
//
LOCUS       DATDHO010000641         2117 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_76046, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000641 DATDHO010000000
VERSION     DATDHO010000641.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2117)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2117)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2117
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76046"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VIY07_12285"
     CDS             <1..241
                     /locus_tag="VIY07_12285"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6382568.1"
                     /translation="KTRPSEILRDGNIFMVCEEDEDLREPLKILGGDRMMLGSDMPHS
                     ESHPNSFQRFKERNDLSDAVKTNIMGETALRFFSR"
     gene            complement(294..1373)
                     /locus_tag="VIY07_12290"
     CDS             complement(294..1373)
                     /locus_tag="VIY07_12290"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY6382569.1"
                     /translation="MTIQTKEFNGEIGIHYPLHVLNRYSLPELIGLADRAWQTLGKLG
                     FSQVWTNDNLEYRSVLASSAAIVARLPVKLGTAVTVPYFRNPVDLAMAFATISELTNG
                     REISLGLGPGSRSILRHQVDRAKPLILMAELAFALRRLFAGEALRSADIPILAAYFHL
                     NAEHYALRFKTQSPIRLYYGPSLLKPAVLDLIARHFDGVILQTLYGIAEMNASLTRLQ
                     SARSQSPRQEPLRKVMLLNASVSRNGAAATQHAKRFVSHIVSGWPDEVLAAKGIDPQA
                     IQAVRRAYAENRGVDHAASLTPDEAVDHLIIAGTPAHCSERIAELFSLAARDEFTQVA
                     IGVPLGPDIPEVIDLWGKEILPALR"
     gene            complement(1420..>2117)
                     /locus_tag="VIY07_12295"
     CDS             complement(1420..>2117)
                     /locus_tag="VIY07_12295"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6382570.1"
                     /translation="LNYFFQRQRPEEMNLKPDFGASSSRPAPGRVKTLGLDGPKLKEA
                     LRTWRFWAFAFGVLAGAIPLHMVLIHQVAAVSDAGFSKELAAFGLGLIGLFTAPAMIF
                     MGLLADRIGRQWSYLLGSASLMVGIFLLMMITDADRRWLFYAFPPFIALGFSSRQSLY
                     PTIAADLFHGKSFGAIIGAIALFIGAGAGIGPWLGGAIHDWTGSYYWAFCVAQALAFF
                     SVVFIWMAGSRDY"
BASE COUNT          494 a          590 c          640 g          393 t
ORIGIN      
        1 aaagactcgg ccgagtgaga tcctccgcga cggcaatatt tttatggtgt gtgaagagga
       61 tgaggattta cgtgagccgc tcaagatctt gggcggggat cgcatgatgc tgggctcgga
      121 catgcctcat tccgagagcc accccaattc gtttcaaagg ttcaaggaac gaaacgactt
      181 gagcgatgcc gtcaaaacaa acatcatggg cgagactgcg ctcaggtttt tctcgcgtta
      241 agttatctga agggctcgtc ccttggtcgt tgctggtcac tgaataatcc acgctagcgc
      301 agcgccggca ggatttcctt gccccagaga tcgatcactt cgggaatgtc ggggccgagg
      361 ggaacgccga tcgcaacctg cgtgaattca tctcgtgcgg cgagcgaaaa cagttccgcg
      421 atccgctcgc tgcagtgcgc cggtgtgccc gcgatgatca gatgatcgac ggcttcgtcc
      481 ggcgtaagag acgcagcgtg gtcgacgccg cgattttccg cgtaagctcg gcgcactgct
      541 tgaatcgctt gcgggtcgat gcctttcgcc gcgagaactt catccggcca gcccgaaacg
      601 atatgggaaa cgaagcgttt cgcgtgctgt gtggcggccg cgccgttgcg cgaaaccgaa
      661 gcgttgagca gcatcacttt gcgcagcggc tcttgccgtg gggattgtga gcgcgccgat
      721 tgaagacgcg tcagcgaagc gttcatctcg gcaatcccat agagagtttg cagaatcacg
      781 ccgtcgaagt ggcgcgcgat gagatcaagt acggcgggct tgaggaggct aggaccatag
      841 taaagacgga tcggcgattg cgttttgaag cgcagcgcat agtgttccgc gttcaaatga
      901 aaataggcgg ccagaatcgg aatatcggcg ctgcgtagtg cctcgccggc aaacagtctc
      961 cgcaaggcga acgccagttc ggccatgagg atgagcggct ttgcccgatc gacttgatgt
     1021 ctaagtatcg accttgatcc gggccccagg ccgagggaga tctcccgccc gttggtgagc
     1081 tcggatatcg tcgcgaaggc catggcaaga tcgaccgggt tgcgaaagta gggaactgtg
     1141 acggcggtcc caagcttgac cggcaagcgc gctacgatcg ccgccgagct ggcgagcacg
     1201 ctgcgatatt caagattatc gttggtccaa acctggctga agccgagttt tcccaacgtc
     1261 tgccacgcgc gatcggcaag cccgatcaat tccgggagag agtaacgatt gagcacgtga
     1321 aggggatagt ggatgccgat ttcgccgtta aattcttttg tttggatggt cataccggtg
     1381 cagctatcac ggcgcgccga acgaagtcaa aaggtggatt tagtaatcgc gcgagcccgc
     1441 catccagata aagactaccg aaaaaaaggc cagcgcctga gcgacgcaga aggcccaata
     1501 gtagctgccg gtccaatcgt gaatcgcgcc gcccaaccaa ggccctattc ccgctcctgc
     1561 gccgatgaac aacgcgatcg cgccgatgat tgcgccgaag gacttgccgt gaaagaggtc
     1621 ggccgcgatg gtgggataaa gcgattgccg ggaggaaaaa cccaaggcga taaaaggcgg
     1681 gaaggcatag aaaagccacc ttcgatccgc gtccgtgatc atcatcaaaa gaaaaatgcc
     1741 gaccatcaac gacgccgagc cgagcaaata ggaccattgg cgaccgatgc ggtcggctaa
     1801 caaacccata aagatcattg ccggcgcggt gaacagtccg atcagtccca ggccaaacgc
     1861 ggccagttct ttggagaacc cggcatcgct caccgcggcc acctgatgga tcaacaccat
     1921 gtgcagcggg atcgcaccgg ccagcacgcc gaaagcaaaa gcccaaaacc gccaggtccg
     1981 cagcgcctcc ttcaacttcg gcccgtctaa gcccaaagtc ttcacgcggc ctggggccgg
     2041 ccgtgaggac gaggcgccga aatcgggctt gagattcatc tcctccggcc tctggcgctg
     2101 aaagaaatag tttaaag
//
LOCUS       DATDHO010000642         3425 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_129993, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000642 DATDHO010000000
VERSION     DATDHO010000642.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3425
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_129993"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..406
                     /locus_tag="VIY07_12300"
     CDS             <1..406
                     /locus_tag="VIY07_12300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008138381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HEY6382571.1"
                     /translation="PPPRLNRSIVDSMLDLMPSPRLVFHEWDQHGTCSGLSPRAYFEN
                     VRKARERITIPPEYLELDRPIEVTPAEVADAFVKANPGLSRATLSISCDRKWLTEVRI
                     CLGRDLTFRDCTNMRRNACHVEKARMPAVRGG"
     gene            437..1327
                     /gene="rlmJ"
                     /locus_tag="VIY07_12305"
     CDS             437..1327
                     /gene="rlmJ"
                     /locus_tag="VIY07_12305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEY6382572.1"
                     /translation="MNYQHDFHAGNFADVLKHAVLCRILHYLRGKPAAFRVIDTHAGS
                     ALYDLAGEKASRGGEWRDGIGKLMAAKIPEATAALLAPYLEVVRALNDRNRLRVYPGS
                     PALARAWLRAQDRLIACELEPKASWSLSRNLQGDARIKTLRIDGWTAMNAYVPPRERR
                     GLVLVDPSFEADSDFPRLASGLAAAHRKWATGIYILWYPIKGRRQADAFAKQVRRLAI
                     RALRAELFVGPPSDQNRLNGAGLIIVNPPWTLENDLSALLPALSAILGSVGKGGFRLD
                     WLPPGDGGSMASFHSPAVGV"
     gene            1481..1696
                     /locus_tag="VIY07_12310"
     CDS             1481..1696
                     /locus_tag="VIY07_12310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEY6382573.1"
                     /translation="MAQTGVVKFFNGERGYGFIKPDDGGRDVFVHITAVEQAGLKGLN
                     EGQRISFDVEPDKKGKGPKAVNLVVTG"
     gene            complement(1935..2552)
                     /locus_tag="VIY07_12315"
     CDS             complement(1935..2552)
                     /locus_tag="VIY07_12315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein"
                     /protein_id="HEY6382574.1"
                     /translation="MKKKMLAISVAAVAAAGSAAAADLPRGPAPYYYPPAPSIYNWSG
                     FYAGLNLGYEWGKVTNGSINPTGVAGGGQLGYNWQTGQFVFGAETDIQVSAADDTFAP
                     WKFSNPWFGTLRGRAGYAMNNILLFATAGLAYGNLNAEAFGLEENKTRAGWTAGLGME
                     VGFTPNWSAKVEYLYMDLGSRFYTLTGTDNGLQASYLRFGVNYHF"
     gene            2854..>3425
                     /locus_tag="VIY07_12320"
     CDS             2854..>3425
                     /locus_tag="VIY07_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6382575.1"
                     /translation="MADDVAKNPRTALVTGAGRRIGAVIALALARAGYGVVLHAHNSR
                     EDAERLAGAINGAGGRARVVLADLADHEAVRGIIPASAAFGPLALLVNNAGEFEPDDI
                     ETLSPARFQRAIAVNLAAPLFLSQAFAAQAAAGVDASIVNILDQRVLRPTPRFFSYTL
                     SKAALQTATITLAQALAPRIRVNAVAPGPTL"
BASE COUNT          663 a          998 c         1055 g          709 t
ORIGIN      
        1 gccgccacca cgactcaacc gctcaatcgt ggacagcatg ctcgacctga tgccgagtcc
       61 ccgcctggtt tttcacgagt gggaccagca cgggacgtgc tcgggtctct caccccgcgc
      121 ctatttcgaa aatgtgcgaa aggcgcgcga gcggatcacc atcccgccag agtatctcga
      181 actcgacagg ccgattgaag tgacacccgc cgaagtggcc gatgcgtttg tcaaagccaa
      241 ccccggcctc tcacgcgcaa ccctgtcgat ttcctgcgat cgaaaatggc tcaccgaggt
      301 acgcatatgt ctcgggaggg atcttacttt ccgcgattgc acgaacatgc ggcggaatgc
      361 ctgccatgtc gagaaggcca ggatgccagc ggtgcgcggc ggttgacgag cttcattgaa
      421 gctgagggga ctgttcgtga actatcagca tgattttcat gccggcaatt ttgctgacgt
      481 cctcaagcat gcagtgcttt gccgtattct gcactatctg cgcggcaagc cagcagcgtt
      541 tcgcgtgatc gatacgcatg cggggtctgc gctttacgac ctcgccggcg agaaagcatc
      601 gcgcgggggc gaatggcggg acggcatcgg caagctcatg gctgccaaga tcccggaagc
      661 aactgcagct ctgcttgcgc cttatcttga ggtagtccgc gcgctgaacg acaggaatcg
      721 gcttcgcgta tatccagggt cgccggcgct ggcgcgggcc tggctgcgtg cgcaggaccg
      781 gttgatcgcc tgcgagctgg agcccaaggc gtcgtggtcg ttgagccgca atttgcaggg
      841 cgacgcgcgc atcaagaccc tgcgtatcga tggctggacg gcaatgaatg cctacgtgcc
      901 gccaagggag cggcgcggtc tggtgctggt cgatccttca ttcgaagccg acagtgattt
      961 tccgcgcctt gccagcgggt tggcggccgc acaccgtaag tgggcgaccg gcatctacat
     1021 cctctggtac ccgataaaag gtcggcggca ggcggatgcc tttgccaagc aagtgcgccg
     1081 gctggcgatc agggcgctcc gcgccgagct tttcgtcgga cccccgagcg atcagaaccg
     1141 gctcaacggc gcaggattga ttatagtcaa tccgccctgg acactggaaa acgatctttc
     1201 ggccctgtta ccggccctga gcgccatcct gggctccgta ggcaagggcg gttttcggct
     1261 cgactggctt cccccgggtg acggcggctc catggcctct ttccacagcc ccgcagttgg
     1321 tgtgtagttc acacattggc agtgacgttc cgcctcctgt gggggccggc ggagtgactg
     1381 aggccgatct gcggctgacg ctttccccga ttgtgaatgt ccggccgagc cgccgtgcgt
     1441 ggggccggcg gcggagcagt tggggaaaag gagtttcccg atggcgcaga cgggagtggt
     1501 gaaattcttt aacggcgaac gaggctatgg cttcattaaa cccgacgacg gcgggcgcga
     1561 cgtgttcgtt catattacgg cggtcgagca ggccggtcta aaaggattga atgagggaca
     1621 acgcatcagc ttcgatgtcg agccggacaa aaaaggcaaa ggtccaaagg ctgtaaatct
     1681 ggtcgtgacc ggatgatggt cgcgcagagg actgtgcgaa ggcccctttg acgttcgtgc
     1741 ttggctgcag cggcgatgtt tctatcctgc tgcgagttga cgagtgatcg gcaacgcaag
     1801 atgccagagg gacggtgcac tcccgacgct tcgtatcgat ttgatcgaac ggagcgggca
     1861 ttcggcattc gccgcgcact ggaatacatc cccggacaca agtccggggt tttttgtgga
     1921 gcgaggcacc cagatcagaa gtgatagttc acaccaaagc gcaggtagct tgcctgcaat
     1981 ccattgtcgg tgccagtaag cgtatagaag cggctgccga gatccatgta cagatactcg
     2041 accttggccg accaattcgg cgtgaagccg acttccattc caagtcctgc agtccagcca
     2101 gcgcgagtct tgttttcttc gaggccgaaa gcttcggcat tgagattgcc gtaggcgagg
     2161 ccggcagtgg cgaataacaa gatgttattc atcgcgtacc cagctcgacc ccgcagggtg
     2221 ccaaaccagg ggttggaaaa tttccatggt gcgaaagtgt cgtcggcggc actgacctgg
     2281 atgtctgttt cggcgccaaa cacgaattgt ccagtctgcc agttgtaccc aagctggccg
     2341 ccacccgcga ccccggtggg attgatactg ccattggtga ccttgcccca ctcataacca
     2401 agattgagac cggcgtagaa acctgaccag ttataaatgc ttggtgcagg cgggtagtaa
     2461 taaggcgcgg gaccgcgcgg gagatcagcg gcggcggccg atcctgcggc tgcgactgct
     2521 gccacagaga tcgccagcat cttctttttc attttgtcct ccactcaact ccgctcattc
     2581 gcgtcatgca gaagcgcaca atgcatccat gcatcggcga aacttgaatt ttttcgtgga
     2641 ggaatttatc gggcgtttta ggttaagcgc ttgtgaacgg ccaggtgaga gcaaccgaca
     2701 tccctaaaga acccttattt ttacgagttt ttcttcgctt tcgtttacca tgccaggtca
     2761 ggcctcattt actatgcagc gagacctcat gcggctgcag cagtgcagcc ggaagcgaac
     2821 caggcaacaa gaggcccgca cggatcattg ggaatggctg acgacgtcgc aaaaaatcct
     2881 cgcactgcgc tcgtcaccgg ggcaggccgg cgcatcggcg ctgttatcgc gctcgctctc
     2941 gcgcgggccg gttacggcgt cgtgctgcat gctcacaatt cccgggagga tgccgaaaga
     3001 ttggccgggg cgattaacgg cgccggcggg cgggcaaggg ttgtgctggc cgaccttgcc
     3061 gaccatgagg ctgtgcgcgg catcataccc gcgtcagcgg cgttcggacc tttggcgctc
     3121 ctggtcaaca atgccggcga gttcgagcct gatgacatcg aaacgctttc gcccgctcgc
     3181 ttccagcgtg ccatcgctgt gaaccttgcc gcgccgctgt ttctttctca agcttttgca
     3241 gcgcaggccg ctgccggcgt tgatgcttcg atcgtgaaca ttctcgacca gcgcgtgctc
     3301 aggccaactc cgcgattttt ctcctacacc ttgagcaagg ctgcgttgca gacagccacg
     3361 atcacgctgg cacaggcgct ggcgccgcgg attcgtgtaa acgcggtggc gccgggtccg
     3421 actct
//
LOCUS       DATDHO010000643         1960 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_377211, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000643 DATDHO010000000
VERSION     DATDHO010000643.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_377211"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VIY07_12325"
     CDS             complement(<1..426)
                     /locus_tag="VIY07_12325"
                     /EC_number="1.17.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014132192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEY6382576.1"
                     /translation="MSTSAQRHKTVAVSIGGVTVGGGAPIVVQSMTNTDTADVEATVR
                     QVIELADAGSEIVRITVNNDDAAKAVPSIRDRLFVRGYDVPLVGDFHYHGHLFLTRYP
                     DCAKALAKLRINPGNVGFGKKRDQQFEMMIEAALRHDKPV"
     gene            complement(506..1408)
                     /locus_tag="VIY07_12330"
     CDS             complement(506..1408)
                     /locus_tag="VIY07_12330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY6382577.1"
                     /translation="MSSTSYTSTTRPLDALAASIVVVLCLSWGFNQVATKLAIHDIPP
                     VTQAAVRSAVAALLISAWCRLRGIGLFKRDGTLWFGIAAGILFAAEFILIFQGLLYTT
                     ASRATLFIYLAPFFVVLGARIVLPADRFKPAQWLGLSLSFIGMVIAFGVPTPSTDPRQ
                     LIGDVMMVGAAVFWAATTLTIKASPLTRASAEKVMLYQLVVSAPVMAIAAILLGERVT
                     HLPSALAIGSMAYQTVWVVSITFVIWFALIARYSASRLSAFTFLTPLFGVAAGHLVLG
                     DPLTPAFAAAVALVAAGLMLVNRA"
     gene            complement(1498..>1960)
                     /locus_tag="VIY07_12335"
     CDS             complement(1498..>1960)
                     /locus_tag="VIY07_12335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015670133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEY6382578.1"
                     /translation="KPDHDHERCASDAIAHAETICAARKERLTPIRRQVLEALLTSHQ
                     PLGAYELIDRLSVCGARPAPITIYRALDFLREQALVHRIESRNAFIACVHNHESADPV
                     VFLICEKCGAVGEAASAAVADTIKSASRAAGFSPKTPVIEISGICAHCKAA"
BASE COUNT          421 a          589 c          616 g          334 t
ORIGIN      
        1 gaccggcttg tcgtgccgca gcgccgcctc gatcatcatc tcgaactgct ggtcacgctt
       61 tttgccgaag ccgacattgc cggggttgat gcgcagcttg gcgagcgcct tggcgcagtc
      121 gggatagcgg gtcaggaaca gatggccgtg ataatggaag tcgccgacca gcggcacgtc
      181 atagccgcgc acgaacagcc gatcgcggat actcgggacg gccttggcgg catcgtcgtt
      241 gttgacggtg atgcgcacga tctccgagcc ggcatcggcc agctcgatca cctgccgcac
      301 ggtcgcctcg acgtcggcgg tgtcggtatt ggtcatcgat tgcaccacaa tcggcgcccc
      361 gccgccgacc gtgaccccgc caatactcac cgcgacagtt ttgtggcgtt gcgcgctcgt
      421 actcatcggc ctttgaatac caaccgtgtg ccagacacat atagcaggac gatcgcgggc
      481 gaaagtcccc cactgcgatg gattcctagg cccggttaac cagcatcaat cctgcagcaa
      541 ccagcgccac ggcggccgca aaggcaggcg tcagcggatc gccaagcacc aggtggcctg
      601 cagcgacgcc gaacaagggc gtaagaaagg tgaaagctga aagccggctc gccgaatacc
      661 gagcaatgag cgcaaaccag atgacaaagg tgatgctgac gacccacacg gtttggtaag
      721 ccatcgaccc gatggccagc gccgacggca gatgcgtgac gcgttcgcca aggaggatcg
      781 cggcgatcgc catgaccggt gcggaaacga cgagctgata cagcatgact ttttcggccg
      841 aagctcgggt gagcgggctt gccttgatcg tcaaggtggt tgcggcccag aacaccgcag
      901 cacctaccat catcacatcg ccgatgagct gtcttggatc cgtcgacggc gtaggcacgc
      961 cgaatgcgat gaccatgccg atgaaggaca gacttaggcc gagccattgg gcaggcttaa
     1021 aacgatctgc gggcaataca atgcgcgcac caaggaccac gaagaaaggc gcaagatata
     1081 tgaataaggt ggcgcgtgaa gccgtggtgt agaggagccc ttgaaagatc aggatgaatt
     1141 cggcagcgaa caaaattcct gctgcaatcc cgaaccacaa ggtgccgtcg cgcttgaaga
     1201 gcccaatgcc gcgcagccga caccacgccg agatcaacag cgccgcaaca gccgatcgca
     1261 cggcagcttg cgtcaccggg gggatgtcat gaattgcgag cttggttgcg acctggttaa
     1321 agccccacga caggcacaac acgaccacaa tactggccgc aagcgcgtca agcgggcgcg
     1381 tggtcgatgt gtaggaggtc gaggacaatg gagaggcatt ccggcgcgtg gcgtcacatt
     1441 cctaccgtac cgacttaagg atgtcatggc cggcgctcgc cggtgacgac aacgttgtca
     1501 cgccgccttg caatgcgcgc agatgccgga gatctcgata acgggtgtct tgggtgaaaa
     1561 gccggccgcg cgcgatgcgc ttttgatggt gtcggcaact gcggctgaag ccgcctcgcc
     1621 aaccgcgccg catttttcgc agatgaggaa cacgaccgga tcggcgcttt cgtgattgtg
     1681 cacgcaggca atgaaagcgt ttcggctttc aatgcggtgc acgagcgcct gctcgcgcag
     1741 gaaatcgagc gcgcgataga tcgtgatcgg cgccggcctc gcgccacaca cgctcagacg
     1801 gtcgatcagt tcataggcgc cgagcggctg gtggctggtc aaaagcgcct ccagcacctg
     1861 acgccggatc ggcgtcagcc gctcttttcg tgcggcacag atcgtttcgg cgtgagcaat
     1921 agcgtcgctc gcgcaccgct cgtggtcatg atcgggcttc
//
LOCUS       DATDHO010000644         2259 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_76117, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000644 DATDHO010000000
VERSION     DATDHO010000644.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2259
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_76117"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..828
                     /locus_tag="VIY07_12340"
     CDS             97..828
                     /locus_tag="VIY07_12340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018407385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6382579.1"
                     /translation="MAITNSQSGTNVHEIAERIYRINTPVVIEGGPGGFSFNQYLIVD
                     DEPLIFHTGPRKMFPLVREAVASVMPVAELRYVAFSHVEADECGSLNEWLAVAPRSMP
                     LCGTVAAVVSISDLADRPPRALADGERLSHGKHSVQWFDTPHLPHAWECGFLLEEKTR
                     TLLCGDLFTQGGADHPPITESDILGPSEAFRKAMDYYSHTKNGREMLERLASTEPTTL
                     ACMHGSAWRGDGARLLRALANEISR"
     gene            1055..1744
                     /locus_tag="VIY07_12345"
     CDS             1055..1744
                     /locus_tag="VIY07_12345"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEY6382580.1"
                     /translation="MNEIGLFEAMYSARALRRLKPDPVPDEIITKILDAAIRAPSAGN
                     SQHWVFIVVRDPEQRRKLAVIYRKASDIAKAIYEARGRPAHMTEEQYQRMMSSGAYLW
                     EHMGEAPVLLVPCLRDRPAPPRDTLPPAVQAVYEEELVYTDRIRGASIYPAVQNIILT
                     CRALGLGTLITTNHIRCEGEVKALLGIPDGVLTYALMPIGYPEDKFGPVKRRPVNEVT
                     FADRWGAAWPG"
BASE COUNT          501 a          640 c          660 g          458 t
ORIGIN      
        1 ttcgtcgcgc cggatcacgt cgcgaaaaag gaaggcaagt tctaataggg cgcatccaat
       61 ctcacaaccg gtttgcagca aagaaggaga ataccattgg cgattaccaa tagccagtca
      121 gggacaaatg tccatgagat cgcggagcgg atttatcgca tcaacacgcc ggttgtcata
      181 gaaggaggac cgggaggatt ctcattcaac cagtacctta tcgttgacga tgagcctctg
      241 atctttcaca ccgggccgcg caagatgttt ccccttgttc gtgaagcggt tgccagtgtg
      301 atgccagtgg cagagctgcg ttacgtggct ttttcgcacg tcgaggcgga cgaatgcggt
      361 tcgctcaacg aatggctcgc cgtagcccca cgatctatgc cgctgtgcgg cacagtcgcc
      421 gccgtagtct cgatcagcga tctcgccgac cggccgcctc gtgcactcgc cgacggggag
      481 aggctgtcgc atggcaaaca ttccgtgcaa tggttcgaca caccgcacct gccccacgct
      541 tgggaatgcg gcttcctgct ggaagaaaaa acgaggacgc tgctgtgtgg cgatctgttt
      601 acgcagggcg gcgccgatca tccgcccatt acggagtcgg acattctcgg ccccagcgag
      661 gcgttccgta aagcgatgga ttattactcg catacgaaaa atggtcggga gatgcttgag
      721 agacttgctt ccaccgaacc cacaacgctc gcatgcatgc acggcagcgc atggcgtggc
      781 gacggcgcga gacttttgcg ggctctcgct aatgaaattt cgcgctagcc gtgccaaact
      841 tccgcttcga gtagacccga aaagaagcaa cctgtggttg gtaagcgaag tgggatgagc
      901 tatgtcgtgg aaacgaacgg ctagaactcg tcggtatgaa tgcatcgagt caggaaatcg
      961 tggcgtaaag ttcctcggct tagagcaagc ggattaatcc agctaaaaac caaacgtgat
     1021 ccgaggtgta cgtacttgat atggaggacc ggccatgaac gaaatcggac ttttcgaggc
     1081 gatgtattcg gcgcgggcgc tgcgccggct gaaaccggat ccggtgccgg acgagatcat
     1141 cacgaaaatc ctcgacgctg ccatccgcgc cccatcggcc ggcaactcgc agcactgggt
     1201 gttcatcgtc gtgcgcgatc cggaacagcg tcgcaagtta gcagtgattt accgtaaagc
     1261 ctccgatatc gccaaggcga tctatgaagc gcgcggccgc cccgcccaca tgaccgagga
     1321 acagtaccaa cgtatgatgt catcaggcgc ctatctctgg gagcacatgg gcgaagcacc
     1381 ggtgttgctg gtgccctgcc ttcgcgatcg cccggcgcct ccgcgcgata ccctgccgcc
     1441 cgcggtgcag gcggtctacg aggaggaact tgtctacacc gatcggattc gcggcgccag
     1501 catttatccc gccgtgcaga atatcatatt gacctgccgc gccctcggcc ttggtacgtt
     1561 gatcaccacc aatcacatcc gctgcgaggg cgaggtcaag gctctgctgg gaatacctga
     1621 cggcgtattg acttatgcat tgatgcccat cggttacccc gaagacaagt tcggtccggt
     1681 aaagcgccgg ccggtaaatg aagtgacctt tgccgaccgt tggggcgccg cctggccggg
     1741 ttgagtgctg cgaaggcaac agcaaaagtc tttcggacgg ttagtgaacc cgggaacaat
     1801 cgatttgacg tagagtgacc ttgtcggtta tggtcccgtc cagaaacagg gttggtcggg
     1861 ttccgactag agtttgttcg ttcagttcag cgtcctgata tccctagatg gtcttgcgag
     1921 aactgtgagg ttctgcgtgg ccgcatctcc aaagctccta tcctcgataa cgcaacgcag
     1981 aacccaaaac cgtggcaacg ggtcagttgc cgcgaatcga aggaggagat cacatgaaac
     2041 gcttctctgt catcaccatg ggtctgctgg ttatcggatg caccgctttt cggctgctca
     2101 ccccagttat ctgatagaaa agacgagggc tgggtcacgc ttcttgacgg ctccaacccc
     2161 aagagcctag acaactggaa ccgaaccggc gatgccaact ggcgagccga ggacggcgcc
     2221 atcgtggccg acaagggcaa aggcggtcat ctcgtctcc
//
LOCUS       DATDHO010000645         7632 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_328052, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000645 DATDHO010000000
VERSION     DATDHO010000645.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7632)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7632)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7632
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328052"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1042)
                     /locus_tag="VIY07_12350"
     CDS             complement(<1..1042)
                     /locus_tag="VIY07_12350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEY6382581.1"
                     /translation="MSQPASLTWLASHELRLGWRDWASLMTAGGRTRARTAAVALIAF
                     AGFMHVFAYWTVASFANANLASDTATLVGITGSLVLSWSLLLSQGMESVTRAFYSRSD
                     LDLVLTSPASARKVFAVRMGRIAVASVAIAVLLAAPFINVLAVLGGSRWLSAYGVVAA
                     MGAVATAAALSLTVALFRIIGAKRTRLIAQIVAAVIGAAFVILLQIAAIFSAGSLSRF
                     AALQSQWMLSHAPDTGSAFWWPARAVLGDYAALAGVMAFGIAALGVTIWLFSRRFGEH
                     AVAAAGVSSAVVRQRRWSRGFRRRSASRALRHKEWTLLQRDAWLVSQTLMQILYLIPP
                     ALLLWVTFHDRND"
     gene            complement(1039..1794)
                     /locus_tag="VIY07_12355"
     CDS             complement(1039..1794)
                     /locus_tag="VIY07_12355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382582.1"
                     /translation="MTQNRPIALALRGVSKRFDRPAVDALDLTVHGGEFYALVGPNGA
                     GKTTTLRMVVGLLRPDAGSICIDGIDALADPVGAKQITAWLSDEPMIYEKLTPYEYLE
                     FVAGLWRIEPTIGEARARELIGWLGLEPHAHERCEGFSKGMRQKVALAGALVHDPKLI
                     ILDEPLTGLDAGTARQVKNVLRERVRAGGTVIMTTHILEVAERMADRIGVIAGGRLIA
                     EGTLDDLRRQTGETATSLEDTFLMLVAEQAAAA"
     gene            complement(1898..2824)
                     /locus_tag="VIY07_12360"
     CDS             complement(1898..2824)
                     /locus_tag="VIY07_12360"
                     /inference="COORDINATES: protein motif:HMM:NF037995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY6382583.1"
                     /translation="MSDEIRIRMGGYGPPSTGFSKSLKLIGDKLGAQFGNDVKIEYVF
                     NIMDHGHKAEDILTLVENGEITLGYQSSSYLTDRVPELGFVDLPFLFSSNAQARAAMD
                     GTLGEFLARKTEERINYRILGWFENGFRHISNRLRPIHRPADMAGMKIRVLPSEIHRR
                     TFDLLGAVAMRMDLTEAIAMIKAGTLDAQENPLANTVTYGVHKFHKFHTLSNHFYISR
                     PIFLHRLSFESWPDSLKRAMQSAVSEAVAHQRKLAVEEHEESYRAIEAEGCEINALTA
                     KEHELFVAAVQPLLADAQKTYGDAMFRMVPKP"
     gene            2926..3690
                     /locus_tag="VIY07_12365"
     CDS             2926..3690
                     /locus_tag="VIY07_12365"
                     /inference="COORDINATES: protein motif:HMM:NF005451.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY6382584.1"
                     /translation="MNKLASVSKSSRDEISPVEWQARVDLAAVYRLTAHYGWDDVIYN
                     HSSMRVPGESRKFLMKKHDLLYTEVTASNLVKVSMDEDLDEKSGVNRPGFTLHGGVLS
                     ARPDVNCAIHVHTNIGMAIAGLKSGLRMVSQQAIRFYQRIGYHAYEGITEDFDERERL
                     NRDLGQNRAMIMHNHGLLTVGKSAREAFVLMKHLIDAADIQLRLEATGKELIEISPAV
                     CEKTAEQYEHHDAGRGSHDWAAYLRMLDKIDTSYRN"
     gene            3796..4581
                     /locus_tag="VIY07_12370"
     CDS             3796..4581
                     /locus_tag="VIY07_12370"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HEY6382585.1"
                     /translation="MSFTNRMQDRLARGEVALCMGTRLARTAEIAMIADSCGFDALYV
                     DMEHCTISLDDAAQICVAALPVGIAPLVRIAGHQFDDATRLLDMGALGIICPNVSTRA
                     QAEAFARACRFPPLGERSVGGAGPLQGYRATPLGEVNKEGNAATVLIAMLESPEGIAN
                     ADAIAAVPGIDVLLIGSNDLCTAMGIPGELRSPKLRAAYEDAAKACKAHGKHLGVGGI
                     RADVEHVAELIELGARFVITGSDLQYLMKSARHDVAALRKATS"
     gene            4578..4994
                     /locus_tag="VIY07_12375"
     CDS             4578..4994
                     /locus_tag="VIY07_12375"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6382586.1"
                     /translation="MKLKLHHVNFATTDVRVMDKFYRDVLDMQTIPDMGRNRVRDQGY
                     PGDVAFVTDGAVQMHIAEKDMNIGFRTGKVVNPVQHGHIAFRTGDLDAFKRRLEEKGI
                     KYSDYGDWAMTGWKQVFFYDPDGNVVEVHQAPKDAP"
     gene            complement(4991..6214)
                     /locus_tag="VIY07_12380"
     CDS             complement(4991..6214)
                     /locus_tag="VIY07_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007558841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6382587.1"
                     /translation="MDFTLAPEIEDLRLRVRAFVEEHVLPLENDPENFSEHENIPEER
                     LAKVREKAKKAGLWAPQSPKEYGGMDLPIVAWAAIYEEAARSIFGPLAINCMAPDDGN
                     MNLLKLVGTAEQKEKWLRPIVEGKVRSSFTMTEPAPGGGSDPSMIRTSAQKKGDRYVI
                     RGRKWFATGADGAAHFILVARTSDDKRRGLTAFLYHKDQPGWRIVRRIPIMAPHEHGG
                     HCELEFDGLEIPRENVLLEEGDGLKITQIRLGPARLTHCMRWLGFSKRCMEIAQAYVA
                     NREGFGIKLGDRESVQIKLGEVAQQIQIGRLLTMHAAWMLDQGGRARKEVSMAKVQVA
                     DTLHKAADVAIQLQGARGFSQDSIAQWIYRSARAARLVDGASEVHMMVLARFMREEGR
                     DFWQWGPGEGRRNVR"
     gene            complement(6226..7002)
                     /locus_tag="VIY07_12385"
     CDS             complement(6226..7002)
                     /locus_tag="VIY07_12385"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HEY6382588.1"
                     /translation="MKAADMFSLKGRVALVTGASSGLGAQFARALADNGADVALVARR
                     VDRLKALKDEIETKGGRAVAAEADVTDRAAMLRAFDAAEKAFGTVTILVNNAGIAHGG
                     RAVEMPPEEWRKVLSTNLDAVFFWAQEAARRILAANTQGAIVNIASVLGLAVSKGAVA
                     YAAAKAGVVQTTKALAVELAFKGVRVNAIAPGWFVTEMNDDYLTGEAGTAIKREIPMG
                     RFGNPGDLDGALLLLVSDAGSYITGATIVVDGGQVIQIKG"
     gene            7094..7444
                     /locus_tag="VIY07_12390"
     CDS             7094..7444
                     /locus_tag="VIY07_12390"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEY6382589.1"
                     /translation="MERIWQAAINSWNGLVAVTRSEAAFRQELVLLAGGVPLAYFLTE
                     EPGKRFALIGVLVFILIVELLNTAIEKLSDRITRDDDPAIKRVKDMGSAAVGLSLLAA
                     GAVWLWILVERLGL"
     gene            complement(7441..>7632)
                     /locus_tag="VIY07_12395"
     CDS             complement(7441..>7632)
                     /locus_tag="VIY07_12395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008551314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6382590.1"
                     /translation="TSYMHPPLGPTLFFLRGVAPPQITTRHIYVGIIPFVLIQLVALV
                     VLWFVPGLATALPGMLYGH"
BASE COUNT         1510 a         2409 c         2306 g         1407 t
ORIGIN      
        1 aatcgttgcg gtcatggaac gtgacccaaa gaagcagcgc cggaggaata agatacagaa
       61 tctgcatcag cgtctgcgaa acgagccacg catcgcgctg cagaagcgtc cactccttgt
      121 gccgcagcgc gcggctcgca gagcggcggc gaaagccacg cgaccatcga cgctgacgca
      181 cgaccgcgct ggaaacaccg gcggctgcca cggcgtgctc gccaaaacgc cgcgagaata
      241 gccaaatggt cacaccgagc gccgcaatgc cgaaggccat gacgccggcc agcgccgcat
      301 aatctccgag caccgcccgt gcgggccacc agaaggcgct gcccgtatcg ggcgcatgtg
      361 acagcatcca ctgcgattgc aatgcggcga agcgagacag gctgccagct gaaaaaatgg
      421 ccgcaatctg caaaaggata acgaacgccg caccgatgac cgccgctacg atctgggcaa
      481 tcagcctggt gcgtttcgcg ccgatgatgc ggaacagcgc gacggtcagc gacagcgccg
      541 cagccgttgc cacggcaccc atggcagcga ccacaccata ggccgaaagc catcggctgc
      601 cgcccagcac ggccagaaca ttgatgaatg gcgcggccaa cagcacggcg attgcgacgg
      661 atgcgacagc aatccgcccc atgcgcactg caaatacttt gcgtgccgaa gccggggatg
      721 tgaggacgag atcgagatcg gagcgcgaat aaaatgcacg cgtcaccgat tccatccctt
      781 gcgacaggag cagagaccat gacaggacga gcgagccggt tatgccgacc agagttgccg
      841 tgtcggaagc gagattggca ttcgcaaagc tggccaccgt ccaataggcg aacacatgca
      901 tgaagccggc aaaggcgatc agcgcgacgg ccgcggtgcg cgcgcgcgta cgtcctcccg
      961 ccgtcatcag ggaagcccaa tcgcgccaac cgaggcgcaa ttcgtggctg gcaagccagg
     1021 tcaaagaagc tggttggctc acgcggcggc cgcctgctcg gccaccagca tcaggaatgt
     1081 atcctcgaga cttgtagcgg tttcaccggt ctgccggcgc aagtcgtcaa gcgtgccttc
     1141 cgcgatgagc cgcccgcccg caatgacgcc gatgcgatcg gccatgcgct ccgccacctc
     1201 gagaatatgc gtggtcatga tgacggtgcc gccggcacgc acgcgctcgc gaagcacgtt
     1261 tttcacctgc cgggcagtgc cggcgtcgag gcctgtcaat ggctcgtcga ggatgatcag
     1321 cttcgggtcg tgcacgagcg cgccggcaag ggctactttt tgccgcatgc ccttggagaa
     1381 cccctcgcag cgctcatgcg catgcggctc aaggcccagc catccgatca gctcgcgagc
     1441 gcgggcctcc cctatggtcg gctcaatccg ccaaaggccc gcgacgaact caagatattc
     1501 gtagggcgtg agcttttcgt agatcatggg ctcatccgag agccacgcgg tgatttgctt
     1561 ggcgccgacc ggatcagcaa gcgcgtcgat gccgtcgatg cagatcgagc ctgcatcagg
     1621 gcggagcaga ccgaccacca tccgcaaggt tgtagtcttg ccggcgccgt ttgggccgac
     1681 taaggcatag aattcgccgc catggacagt gagatcgagc gcgtcgacgg cggggcgatc
     1741 aaaccgtttg ctgaccccgc gcagcgcaag cgcgatcgga cgattctgcg tcatttcaac
     1801 ggccccactc ggaacagctt ggccgtgtct acgacacgag tcgtttcagc cgcgtaaatc
     1861 ctagaattgc agcaagtgcg ttaagctttc agtcagctta cggcttcggc accattctaa
     1921 acatggcatc gccataggtc ttctgcgcat cggccagcag cggctggacg gccgcgacga
     1981 agagttcgtg ttccttcgcc gtaagcgcat tgatctcaca accctctgct tcgattgccc
     2041 tgtaggattc ttcgtgctct tcgaccgcaa gcttgcgttg atgggcaacc gcttcgctga
     2101 cagccgactg catggcgcgc ttgagactgt ccggccaact ttcgaacgat agtcgatgca
     2161 aaaagatcgg tcgcgaaata tagaaatgat tgctgagcgt atggaacttg tgaaacttgt
     2221 gcacgccata ggtgacggta ttggcaagcg gattttcctg cgcgtcgagc gtgcctgcct
     2281 tgatcatggc aatcgcttcg gtcaggtcca tgcgcatcgc gaccgcgccg agcaggtcga
     2341 atgtgcgtcg gtgtatctcg ctcggcagca cgcggatttt catgccggcc atgtcggcag
     2401 gccggtggat cggccgcagg cgatttgaga tgtgtcggaa accattctcg aaccagccga
     2461 gaatccggta gttgatgcgc tcctccgtct tgcgcgcgag aaattcgccc agcgtgccgt
     2521 ccatcgccgc gcgcgcctgc gcattgctcg aaaacaggaa cggcagatcg acgaacccca
     2581 gctccgggac acggtcggtc aggtagctcg aggactggta gccgagcgtg atttcaccgt
     2641 tctcgaccag cgtgaggata tcctcggcct tgtggccgtg atccatgatg ttgaagacgt
     2701 actcgatctt gacgtcattg ccgaactgcg cgcccaattt gtcgccgatg agcttcagcg
     2761 atttgctgaa accggtgctt ggcgggccgt agccacccat acgaatacgg atttcgtcgc
     2821 tcattttttc tctcgcttgc ggccctctct atactggcgc gttgcgatct ggccaagcaa
     2881 aggcggtgtg atagagtcca tgcgcattca cggaggagta cgccgatgaa caagcttgcc
     2941 agcgtttcca aaagttcacg ggatgaaatt tcaccggtgg aatggcaggc gcgcgtcgac
     3001 cttgcggccg tctaccgcct gactgcgcac tacggttggg acgacgtgat ctacaaccat
     3061 tcatcgatgc gcgtacccgg cgagtctcgc aagttcctga tgaaaaagca cgacctgctc
     3121 tataccgagg tcaccgcgtc caacctggtg aaagtgtcga tggacgagga cctcgacgaa
     3181 aagtctggcg tcaacaggcc cggctttacg ctgcatggcg gcgtgctgag cgcgcgtccg
     3241 gacgtgaact gcgccataca tgtgcatacc aatatcggca tggcgatcgc cgggctcaaa
     3301 agcgggctcc gcatggtgtc ccagcaagcg atacgcttct atcaacgcat cggttatcac
     3361 gcctacgagg gcatcacgga ggatttcgac gaacgcgagc gtctaaaccg cgacctcggc
     3421 cagaaccgcg ccatgatcat gcacaaccac ggtcttctca ccgtgggaaa aagtgcgcgc
     3481 gaagccttcg tgctgatgaa gcatctcatc gacgctgctg acattcagct caggctggaa
     3541 gccaccggca aggagctgat cgaaatttct ccagcggtct gcgagaagac cgccgagcaa
     3601 tatgagcacc acgatgccgg ccgtggcagc cacgactggg cggcatatct gcgcatgctc
     3661 gacaagatcg acacaagcta tcgcaactga ccttcagcgc ccgtcatgcc cggccccgtg
     3721 ccgggcatcc acgtctttct tttgcgaaga cgtggatggc cgggacgagc ccggccatga
     3781 caagagacca gtgacatgag cttcacgaac cgtatgcagg atcggcttgc gcgcggcgaa
     3841 gtcgcgcttt gcatgggcac gcggctcgca cgcaccgccg agatcgccat gatcgcggac
     3901 tcctgcggct tcgacgccct ttacgtcgac atggagcact gcaccatctc gctcgacgat
     3961 gcggcgcaaa tttgcgtcgc cgcgctgccg gttggcattg cgccgctggt acgcatcgct
     4021 ggccatcagt tcgacgacgc gacacggctc ctcgatatgg gcgcgctcgg aattatctgc
     4081 cccaacgtca gcacgcgcgc ccaggccgaa gcctttgcgc gcgcctgccg ctttccgccg
     4141 ctcggcgagc gctcggtcgg cggggccggc ccgctgcaag gctatcgcgc caccccgctc
     4201 ggcgaggtga ataaagaggg taatgccgca acggtgctga ttgccatgct cgagtcgccg
     4261 gaaggcatcg ccaatgccga tgcgattgcc gccgttcccg gcatcgacgt gctgctcatc
     4321 ggctccaacg acctttgcac ggccatgggg attcccggcg aactcaggag cccgaagttg
     4381 cgggcggcct atgaagatgc ggcgaaggct tgcaaggcgc acggcaagca cctcggggtc
     4441 ggcggaattc gcgccgacgt cgagcacgtg gccgagctga tagaactcgg cgcccggttt
     4501 gtcatcacgg gctctgattt acagtacctg atgaaatctg cgcgccatga cgtggcagcg
     4561 ctgcgaaagg caacctcatg aagctcaagc tgcatcacgt caactttgcc acgacggacg
     4621 tccgggtgat ggataaattc tatcgcgatg tcctcgacat gcagacgatt cccgacatgg
     4681 gtcgcaaccg cgtccgagac cagggctatc caggcgacgt cgccttcgtc accgacggtg
     4741 cggtgcagat gcacatcgcc gaaaaggaca tgaatatcgg ctttcgcacc ggcaaggtgg
     4801 tcaatcccgt gcagcacggc cacatcgcct tccgcaccgg cgacctcgat gcgttcaaga
     4861 ggcgtctcga ggaaaagggc atcaaatatt cggactatgg cgactgggcg atgacgggct
     4921 ggaagcaggt atttttctac gatccggacg gcaacgtcgt cgaagtccac caggcgccga
     4981 aagacgctcc ctagcgcacg ttccgccgcc cctcgcccgg gccccattgc cagaagtccc
     5041 gaccctcttc gcgcatgaag cgcgcgagca ccatcatgtg gacttcggag gcaccgtcaa
     5101 cgaggcgagc cgctcgcgcg gagcgataga tccactgcgc gatagaatcc tgcgagaagc
     5161 cgcgggcgcc ctgcaattgg atcgcaacgt cggcggcctt gtgcagcgtg tcggcgacct
     5221 gcaccttggc catcgagact tccttgcggg cgcggccacc ctgatcgagc atccaggccg
     5281 cgtgcattgt gagcaaccgg ccgatctgga tctgctgcgc cacttccccg agcttgatct
     5341 ggacgctttc gcggtcgccg agcttgatcc caaaaccttc gcggttggca acataggcct
     5401 gcgcaatttc catgcagcgc ttggaaaatc ccagccatcg catgcagtgc gtcagccgcg
     5461 cgggaccgag acggatttgc gtgatcttga gtccgtcgcc ctcttccagc agcacgttct
     5521 ctcgcggaat ttcaagcccg tcgaactcga gctcgcaatg cccgccgtgt tcgtgcggcg
     5581 ccatgatcgg gatacgccga acgatgcgcc agcccggttg atctttatgg tagaggaatg
     5641 cagtcagccc acggcgcttg tcgtctgacg tgcgggcaac gaggatgaaa tgcgcggcac
     5701 cgtcggcgcc ggtcgcaaac cacttgcggc ccctgatgac gtaacggtcg ccttttttct
     5761 gtgcgcttgt cctgatcatc gatggatcgg agccgccgcc cggtgccggc tcggtcattg
     5821 tgaagctcga gcgaactttt ccctcgacga taggccttag ccatttttcc ttctgttcgg
     5881 ccgtgccgac cagcttgagg agattcatat tgccgtcatc gggcgccatg cagttgattg
     5941 cgagcggccc gaaaatagag cgcgcggctt cctcgtaaat cgcagcccag gcgacgatcg
     6001 gcaggtccat tccgccgtac tccttcggcg actggggcgc ccacaagccg gccttttttg
     6061 ccttctcgcg caccttggcg agtctttcct ccgggatgtt ctcatgctcg gagaaatttt
     6121 ccggatcatt ctcgagcggc agcacgtgct cttccacgaa agcacgcact cgcaggcgga
     6181 gatcctcaat ctctggcgca agcgtgaagt ccatgcgtcg tttccctagc ccttgatctg
     6241 aatgacctgc ccgccgtcca cgacgatggt cgcacccgtg atgtagctgc ccgcgtccga
     6301 cacaaggagc agcaaagcgc catcgaggtc gccgggattc ccgaagcggc ccatcggaat
     6361 ctcccgcttg attgccgttc cagcctcgcc cgtcaggtaa tcgtcgttca tttccgtgac
     6421 aaaccatccg ggagcaatgg cgttgacgcg cacgcccttg aaggccagct cgaccgcaag
     6481 tgccttggtg gtttgcacga cgcctgcctt ggccgcggca taggcgactg cgcccttgga
     6541 gactgcaagt cccagcaccg atgcaatatt gacgattgcg ccctgcgtgt tcgccgccag
     6601 aatgcgccgc gccgcctcct gtgcccagaa aaagacggcg tcgaggttgg tcgagagaac
     6661 cttccgccac tcctccggcg gcatctcgac agcacggccg ccatgcgcga tgccggcatt
     6721 gttgacgaga atcgtcaccg tgccgaaggc tttctcggcc gcatcgaagg cacgcaacat
     6781 ggccgcacgg tcggtcacgt cagcctcggc ggcaacggcg cggccgccct tcgtctcaat
     6841 ctcgtctttc agcgccttga gccggtccac ccgacgcgcc accagcgcaa cgtcggctcc
     6901 attgtccgca agcgcccggg cgaattgcgc gccgagcccg ctcgaagcgc cggttaccag
     6961 cgccacgcgg cctttgaggc tgaacatgtc cgcggctttc atgcggcagc cgttatacac
     7021 gggctccgta acgatatgga atagagggca aaaaactcgt aactatctcg cgagctttga
     7081 atgggcgggc ggcgtggaac gtatctggca ggcggcaatc aacagctgga atggcctcgt
     7141 cgcggtgacg cggtccgaag cggcgtttcg ccaggaactt gtgcttctcg ctggcggcgt
     7201 ccccctcgcc tatttcctga ccgaggagcc aggcaagcgg ttcgcgttga tcggcgtgct
     7261 tgtgttcatc ctcattgtcg aactgctcaa cactgcgatt gaaaagttga gcgatcgcat
     7321 cacccgcgac gatgatccgg ccatcaagcg ggtcaaggac atgggctccg ccgcggtcgg
     7381 gctgtcgctg cttgcggcgg gcgcggtatg gctctggatc ctggtcgagc gcctgggact
     7441 ctagtgcccg tagagcatgc cgggcaatgc ggtcgcaaga cccgggacga accagagcac
     7501 caccagcgcg accagctgga tgagcacgaa cggaatgatg ccgacataga tatgccgcgt
     7561 cgtaatctgt ggcggtgcga cgccgcgcag aaagaacagc gtcggaccaa gcggggggtg
     7621 catatacgag gt
//
LOCUS       DATDHO010000646         4065 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_130118, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000646 DATDHO010000000
VERSION     DATDHO010000646.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4065)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4065)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4065
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130118"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VIY07_12400"
     CDS             complement(<1..357)
                     /locus_tag="VIY07_12400"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086665.1"
                     /note="catalyzes the formation of ribose 5-phosphate and
                     xylulose 5-phosphate from sedoheptulose 7-phosphate and
                     glyceraldehyde 3-phosphate; can transfer ketol groups
                     between several groups; in Escherichia coli there are two
                     tkt genes, tktA expressed during exponential growth and
                     the tktB during stationary phase; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEY6382591.1"
                     /translation="MANAIRVLAMDAVEQAKSGHPGMPMGMADVATVLFSRFLKFDPA
                     DPAWPDRDRFVLSAGHGSMLIYALLYLTGYEAMTIEQIKKFRQLGSITAGHPEFGHAP
                     GVETTTGPLGQGLANAV"
     gene            648..926
                     /locus_tag="VIY07_12405"
     CDS             648..926
                     /locus_tag="VIY07_12405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4164 family protein"
                     /protein_id="HEY6382592.1"
                     /translation="MTEQSAIDTAVRRLALALDALDAAVERRKQADRSEEGLAAQVQA
                     LGLDRTRLAAALDGETARSRRLETTNREIAERLDTAIASIQSVLDLNE"
     gene            930..1319
                     /locus_tag="VIY07_12410"
     CDS             930..1319
                     /locus_tag="VIY07_12410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEY6382593.1"
                     /translation="MTQVNATIAGRQFRLACEDGQEEHLQSLAKDIDQRIIDLRRKFG
                     EIGDTRLTVMAALMLADELAEAVRKMRRFEEEIAALQDARLVASDRAKAASDAVVGAF
                     NSAAERIEGITKKLNQTVGNGSSVAIG"
     gene            1369..1526
                     /gene="ssrS"
                     /locus_tag="VIY07_12415"
     ncRNA           1369..1526
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VIY07_12415"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            1623..2213
                     /locus_tag="VIY07_12420"
     CDS             1623..2213
                     /locus_tag="VIY07_12420"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEY6382594.1"
                     /translation="MNAADTSVSDRKTRVRQETLELRDALPPAIRAAAAQSIAARPFP
                     IRIEPGVVVSGFSPMKSEINPVPLMRNLADNGARLALPVIAGRGKPLIMRAWNFGDPL
                     VSGQWGIREPTGEASEVAPDIMIVPLAAFDRTGHRIGYGAGYFDMTINALRGKKPVTA
                     IGIAFAVQEIPSVPTTDRDARLDLVLTEREIIDFRA"
     gene            2250..3071
                     /locus_tag="VIY07_12425"
     CDS             2250..3071
                     /locus_tag="VIY07_12425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HEY6382595.1"
                     /translation="MRILFIGDVVGRSGRTIVFERLPGLIAAWKLDLVVVNGENSAGG
                     FGITEVIYNELIDAGADAVTLGNHAWDQREALVFIERAPRLIRPINYPKGTPGRGAAV
                     IDAKNGKRALVINAMGRIFMDPLDDPFAAIERELSVCPLRAGADAIIIDFHGEATSEK
                     QAMGYFADGRASLVVGTHTHAPTADERILPNGTAFVSDVGMTADYDSIIGMNKEEPLN
                     RFLRKLPGAKFEASMGPATLCALAVETDDVTGLARKIGAVRLGGILQEAQPRFWD"
     gene            3158..3904
                     /locus_tag="VIY07_12430"
     CDS             3158..3904
                     /locus_tag="VIY07_12430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEY6382596.1"
                     /translation="MAGHSQFKNIMHRKGRQDKARSKLFGKLAREITVSAKLGLPDPA
                     FNPRLRAAVLAARAENMPKDNIERAIKKSQGADTESYDEIRYEGYGPGGIAVIVEALT
                     DNRNRTAGEVRAIFSKNGGNLAETGAVSFMFSRIGVVEYDAKSASADAILDAAIDAGA
                     EDVVSNEDGHQVITTPDTLNDVTKALEARFGEPRKSSMIWKPQNTVALDDDAGEKILK
                     LIESLDDSDDVQNVYANFEVSDALVAKMSG"
BASE COUNT          843 a         1192 c         1260 g          770 t
ORIGIN      
        1 cacggcgttg gcaagtcctt gtccgagcgg gccggtcgtc gtttcgacgc caggggcatg
       61 gccgaattcg gggtggccgg cggtgatcga cccaagttgg cggaacttct tgatctgctc
      121 gatcgtcatt gcctcgtaac cggtcaggta gagcaatgcg tagatcagca tcgaaccgtg
      181 gccggccgag agcacgaatc gatcgcggtc gggccacgcc ggatcggccg ggtcgaattt
      241 caagaatcgc gagaacaaca cagttgccac gtcggccatg cccattggca tgcccgggtg
      301 gccggacttg gcctgttcca ccgcatccat tgccaacacg cgaatcgcgt tggccatgct
      361 cgcatgggta atggcgggag cagcgaccgg atgctgtcga cgctctggag gcgccgcggc
      421 tgccgtcggc gaagcttttg cgctcatgaa atggcctttt ggcgggtgga tagcatgtga
      481 gtcccttgag tcaatctgac cgccgcggtg ctgacccacc atgcacaggt tgacgaaaac
      541 agctgggcaa atcgtcccgc aagcgttgac tgcatggtcg cgcagcacgt aagattcttt
      601 ggctaaatgt ctgccgccgc aagagttttc ggtgcggagc aaaggcaatg accgagcaaa
      661 gcgcaatcga taccgcggtc aggcgtctcg cgctcgcgct cgacgcgctg gatgccgcgg
      721 ttgaacggcg caagcaagcc gaccgtagcg aagaaggttt ggcggcccag gtgcaggccc
      781 tcggcctcga ccgcacgaga ttggccgccg cactggacgg cgagaccgcg cgttctcggc
      841 ggctcgaaac aacgaatcgc gaaattgccg aacggctcga taccgcgatc gcatcaattc
      901 agtctgtgct ggatctgaat gagtgaccaa tgacgcaagt caacgccacc attgccggcc
      961 gtcaattccg ccttgcctgt gaagacgggc aggaggaaca ccttcagtcg ctcgccaaag
     1021 acatcgatca gcgcatcatc gaccttcgcc gcaagtttgg tgaaatcggc gacacgcgcc
     1081 ttacggtgat ggcggcgctg atgctggccg acgaactcgc ggaagcagta cgaaagatgc
     1141 gccgctttga ggaggagatc gccgcgctgc aggatgcccg cctcgtcgct tctgatcgcg
     1201 ccaaggccgc atcggatgcg gtcgtcgggg cgttcaattc cgccgccgag cgtatcgaag
     1261 ggatcaccaa gaagctcaat caaactgtcg gcaacggcag cagcgtggcc atcgggtgac
     1321 gccgccgcac aagtggcgtc ggcatgacat aaccattaca ttcgatgcgc ggggctgcgg
     1381 ggtgcgtcag gagacacaat ccccggggcc ttatcgatcc ttaagggagc tgtccctggc
     1441 cgggctcgtg ggttcggcca tatggcgccc acctactttc gtagggaacc cgggatcgat
     1501 tctccaacgg ccatcgcggc tccgcacttt gttggtcgca ctgttcacgt gaatggccgg
     1561 gcttgtcccg gccattcacg tctttgatga tgagcttctg cgaaagcatg gatgcccggc
     1621 acatgaacgc agccgacaca tcagtttccg accggaagac ccgggtccgc caggaaacgt
     1681 tggagttgcg cgacgctttg ccgcctgcca tccgcgcggc cgcggcgcag tcaatcgcag
     1741 cgcggccgtt cccgatcagg atcgaacctg gcgtcgttgt gtccgggttc tcgccgatga
     1801 agagcgaaat aaacccggtg cccttgatgc gaaacctcgc ggacaacggt gcgcggctcg
     1861 cattgccggt catcgccggg cgtggcaagc cattgatcat gcgggcgtgg aatttcggcg
     1921 atcccctggt ctccggccag tggggaatcc gggagccaac gggcgaggcg tctgaagttg
     1981 cgcctgacat tatgatcgtg cctctcgctg catttgacag aaccgggcat cgcatcggtt
     2041 atggcgccgg atatttcgac atgacgatca acgcgcttcg gggcaaaaag ccggtgactg
     2101 ctatcggcat tgccttcgct gttcaggaaa ttccatccgt cccgactacc gatcgcgacg
     2161 cacggctcga tctcgtgcta acggaacggg aaataatcga ttttcgtgca tgaccctaca
     2221 ctgcgcaaat aaccaaagag attgaacgca tgcgcattct ttttatcggc gatgtcgttg
     2281 gccgctcggg gcgcacaatc gtattcgaac gactgccggg actcatcgcg gcatggaagc
     2341 tcgatctggt cgtcgtcaac ggcgagaact cggcaggcgg gtttggcatt accgaagtca
     2401 tttacaatga gttgatcgat gccggcgcag atgccgtgac gctcggaaac cacgcctggg
     2461 atcaacgcga ggcgcttgtg tttatcgagc gggcgccgcg cctgatccgc ccaatcaatt
     2521 acccgaaagg gacgccgggc cgcggcgcgg cagtgatcga tgccaagaac ggcaagcgcg
     2581 cgctcgtgat caatgccatg gggcgcattt tcatggatcc gctcgatgat ccttttgctg
     2641 ccatcgagcg tgaactgtcg gtttgcccgc tcagggcagg tgccgatgcg atcatcatcg
     2701 attttcatgg cgaggcgacc agtgaaaagc aggccatggg ctattttgcg gatggccgcg
     2761 cgagcctcgt ggtcggcaca catactcatg cgcccacggc ggatgagcgg atcctgccga
     2821 atggcaccgc cttcgtatcc gatgtcggaa tgaccgccga ttacgattcc atcatcggca
     2881 tgaacaagga ggagccgctg aaccggtttt tgcgcaaact tcccggcgcg aaattcgagg
     2941 cgtccatggg tcctgcgacg ctgtgcgcgc tggctgtcga gacagacgac gtcacaggcc
     3001 tcgcgcggaa gatcggcgcc gtgcggcttg gcggcatcct gcaagaggcg cagcctcgat
     3061 tctgggactg acgtgttttt gcgattgcac tcggcgatat ttattttcgc aagcgggcgg
     3121 cttatatagc cggcatcacc aacttcgcgc gtttctcatg gccggtcatt cccaatttaa
     3181 aaacataatg catcgcaagg gccgccagga taaggcgcgc tccaagctgt tcggcaagct
     3241 tgcacgggaa ataactgtgt cggcaaagct cgggctgccc gatccagcct tcaatcccag
     3301 gctgcgggcg gccgtgctgg cggcgcgggc cgaaaacatg ccgaaggata atatcgagcg
     3361 ggcgatcaag aagtcgcagg gcgccgacac cgaaagctac gacgagattc gctacgaggg
     3421 ctatggccct ggcggtattg cggtgatcgt cgaggccctg accgacaatc gcaaccgcac
     3481 cgccggcgaa gtacgcgcga tcttctccaa gaacggcggc aaccttgccg aaaccggcgc
     3541 ggtgtcgttc atgttcagcc gtatcggcgt agtcgagtac gatgccaaat cagcaagcgc
     3601 ggatgccatc ctggacgccg caattgatgc gggcgccgag gacgtggtgt caaacgagga
     3661 cgggcaccag gtcatcacca ctccagacac actgaacgac gtcaccaagg cactcgaagc
     3721 caggtttggc gagccgcgca agtcatcaat gatatggaaa ccgcaaaata ccgttgcgct
     3781 cgacgacgac gctggcgaga aaatcttaaa actgatcgaa tcgctcgacg acagcgatga
     3841 tgttcagaac gtttacgcga atttcgaagt atcggacgcg ctggtcgcca aaatgagcgg
     3901 ctgagagcta cccattgggg tgacggtagg tttctcgtgt cgcttcgtca cgaatgcgct
     3961 cgacggtttg gttgcgcgag cgtgtacgcc acatatagat cccatagacg agggccatgg
     4021 ccaaaaccac gacaaagccg acgtcgatca acagccagag ccagc
//
LOCUS       DATDHO010000647         2459 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_279073, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000647 DATDHO010000000
VERSION     DATDHO010000647.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2459
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279073"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(145..1818)
                     /gene="ilvD"
                     /locus_tag="VIY07_12435"
     CDS             complement(145..1818)
                     /gene="ilvD"
                     /locus_tag="VIY07_12435"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY6382597.1"
                     /translation="MAENLKPRSRVITDGPDRAPSRAMLKAVGFSDEDLSRPIIGVAN
                     TWIEIGPCNFHLRRLAAKVKEGIRAAGGTPMEFNTVSISDGISMGAEGMKCSLISREV
                     IADSIELVARGNHFDALVCLSGCDKTNPGVVMALARLDIPGLALYGGSIAPGRLGDRD
                     LTIQDVFEAVGAYGIGKINAEQFKAVENTACPGAGACGGQFTANTMSTVMEFLGISPM
                     GSNGIPATVAEKEEAAFNAGKLVMDALQRDLRPSQIITRKAVENAIAGVAATGGSTNA
                     VLHLLAIAREAGVELTIDDFDSISSRTPLIADLKPGGRFVANDLYKAGGIQLVAKRLI
                     DAGLIHGDTLTVTGRSLAAAAQIAQETAGQEVVRPLSKPLKPTGGLVILKGNLAPEGC
                     VVKVAGHERMIHKGPARVFDCEEDSFQAVQKGQIKPNDVVVIRYEGPKGGPGMREMLG
                     VTAALVGAGLGDSVALITDGRFSGATHGLVAGHIAPEAAHGGPIALVRDGDTIVFDIA
                     ARRLEVAIADQEMDERRRRWSPPPPRYITGVMAKYAKLVSSASEGAVTN"
     gene            2145..>2459
                     /locus_tag="VIY07_12440"
     CDS             2145..>2459
                     /locus_tag="VIY07_12440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382598.1"
                     /translation="MATRTGQPKLTRRACGAMAAHMALLERYPGFRTRQQRLEGETAR
                     RRALGFMAAELKLAKIKVVVHVVYKDPSQNVSDAQINSQMKVLNLDFRAKNSDKKKTP
                     AGG"
BASE COUNT          557 a          763 c          624 g          515 t
ORIGIN      
        1 aatgatctct tggttgctaa cataatccag gctcattaca aaaactcctt tcgttacttc
       61 ttgatggaaa aatccggccg cccggtctcg taacctcgct aattcctatc cgccaccagt
      121 tcgtaccgtt atccacgatc ctacttaatt cgttaccgcg ccctcagacg ccgaagaaac
      181 aagcttggca tatttcgcca tgactcccgt gatatatcga ggcggcggag gcgaccatct
      241 tcgtcgccgc tcgtccatct cctggtccgc gatcgcaacc tcgagccgcc ttgccgcgat
      301 atcaaaaaca atggtgtcgc cgtcacgcac cagcgcgatc gggccgccat gagccgcctc
      361 gggcgcgata tgaccggcca ccagaccgtg ggtggctcca gagaatcggc catcagtaat
      421 gagcgccacg gaatcaccca gaccagcgcc cacaagagcg gcggtcacac cgagcatctc
      481 gcgcatcccg ggtccgcctt tcggcccttc gtaacgaatc acgactacgt cgttgggctt
      541 gatttggcct ttttgcaccg cctgaaaaga atcttcctcg cagtcgaaaa cacgggcggg
      601 acctttatga atcattcttt catgtccagc aacttttacc acgcaaccct ccggcgccag
      661 attgcctttg agaatcacca ggccgccggt gggcttcagc ggttttgaca acggccgcac
      721 cacctcttgc cccgcggttt cctgcgcgat ttgcgccgcc gcagcgagag acctacccgt
      781 cacggtcagt gtatcgccgt gaatcaagcc agcatcaatc aagcgtttgg cgacgagttg
      841 aatgccgccc gctttgtaaa gatcgttggc gacaaatctg ccacccggtt tgagatccgc
      901 tatcaacggg gtacgactac tgatcgaatc aaagtcatcg atggtcaatt caacaccggc
      961 ctcgcgcgcg atggcaagca aatgcagcac cgcgttagtg gaacctcccg tcgcggcaac
     1021 cccggcaatc gcgttctcaa cggctttacg tgtgatgatc tgggaaggtc gcaagtcacg
     1081 ctgtagagca tccatgacaa gtttgccggc gttaaacgct gcctcttcct tctctgccac
     1141 ggtcgcggga ataccgttgc ttcccatcgg cgaaattccc aggaattcca tcaccgtaga
     1201 catggtattg gcagtgaact gtccgccaca tgcgcccgcg cccgggcacg ccgtattttc
     1261 cacagctttg aattgttcgg cgttgatctt gccgattccg tacgccccca ccgcctcaaa
     1321 aacatcttga atcgtcaggt cgcggtcgcc gagacgcccc ggcgcgatgg agccgccata
     1381 cagcgcgagc ccgggaatat cgaggcgagc gagcgccatc acgacgccgg gattggtttt
     1441 gtcacagccc gaaaggcaga ccagcgcgtc gaagtgattg cctcgcgcca ccagctcaat
     1501 ggaatcggca atgacctcgc ggctgatgag cgagcacttc atcccttccg cgcccatgct
     1561 gataccatcg gagatcgata ccgtgttaaa ctccatgggc gttccgcccg ccgctcggat
     1621 accctcctta acttttgccg ccaggcggcg aagatgaaag ttgcacgggc cgatttcgat
     1681 ccacgtattc gccacgccaa tgatgggtcg cgacaaatct tcatccgaaa agcctacagc
     1741 cttcaacatt gcccgcgagg gtgcccgatc aggcccatcg gtgatcacac gacttctagg
     1801 ctttaaattc tcagccataa attgctcctt acgactagca cagaggctta attaacaatg
     1861 gcagtcctgc ttttgcaagc agctcttata gtcgaatcta actttacggt tcttgcgcgg
     1921 cggcggcaac gcggctaccg ccccgttgag tcaattttgc ttgacagaga tgattgtgat
     1981 cgaataggtt tcaaacaacg cttgacgccg cggcgaaaaa tctgaaattc gtggttcgga
     2041 atgtccagtg atccaaaaca tgcgcactgt tgcgactgct ttaagctgaa ttagagtcag
     2101 aggattgcgg ctagcgcaat ccctcaaatc aaaggaggtg cttcatggcg acaagaaccg
     2161 gacaaccaaa actcacccgg cgcgcttgcg gcgcaatggc cgcgcacatg gccttgctcg
     2221 aacgctatcc gggattccgc acgaggcaac agcgacttga aggtgaaacc gctcgccgcc
     2281 gcgcgcttgg attcatggcc gcagagctaa agctcgccaa gattaaggtg gtcgtccacg
     2341 tggtctacaa ggatccgtcc caaaacgtct cggacgccca aatcaacagc cagatgaagg
     2401 ttctcaacct cgatttccgg gcaaagaact ccgacaagaa aaaaacccct gccggaggg
//
LOCUS       DATDHO010000648         5765 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_427386, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000648 DATDHO010000000
VERSION     DATDHO010000648.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5765)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5765)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5765
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427386"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            375..743
                     /locus_tag="VIY07_12445"
     CDS             375..743
                     /locus_tag="VIY07_12445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382599.1"
                     /translation="MTGKTKEEFWAELEAIGEKEVRERVAKRAYRDLEQQDLWSREWL
                     LRREFNREFAFEQPKIAAEIELAKAMRAAYAKERGVIEATLAAAKAADRQATIATRIA
                     VAALLVGIVALVLSVFLDLK"
     gene            complement(2060..2359)
                     /locus_tag="VIY07_12450"
     CDS             complement(2060..2359)
                     /locus_tag="VIY07_12450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEY6382600.1"
                     /translation="MKSLVVKRSVMIDRHKTSVSLEEPFWSGLKEIARSERATVSALV
                     AKIDSKRERGNLSSAIRLFVLDQVRTNGMLRITAATLMCAVVLTASLPTTASAWY"
     gene            complement(2886..3143)
                     /locus_tag="VIY07_12455"
     CDS             complement(2886..3143)
                     /locus_tag="VIY07_12455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382601.1"
                     /translation="MATWNAHCRIPDGIYVTREQHVARSKEHALALVSVGQLREAVAS
                     MMMDMRKYPNCEVPHEIHAIGIYAAGAGDVAVVRAYVEGFN"
     gene            3380..4594
                     /locus_tag="VIY07_12460"
     CDS             3380..4594
                     /locus_tag="VIY07_12460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiH/UbiF family hydroxylase"
                     /protein_id="HEY6382602.1"
                     /translation="MAELYGESRSVVVVGRGPAGLTAAIALAQGGLSLVLAGNPSAKS
                     DNRTTALLAGSVTALETLGVWNLCAAQAAPLKVMRIVDDTGRLWRAPEVMFQASEIGL
                     DAFGYNIENRYLTDALEQRARGLPDLHIIDDEVLSAVEDGRTAAVKTRDEAILRASLV
                     IGADGRNSICRAAAGIGTDERRYPQVALTLCVRHSRPHQDTSTEFHTRTGPFTLVPLP
                     GKRSSVVWVLDRVSAEDVAALDDAELAREIERASHSIVGKIEVEPGRGRFPLHIATAR
                     RFADKRIALVGEAAHVVPPIGAQGLNMGLRDAATISEVAIAAHRNGLDIGNPDVLARY
                     ETMRQADVRSRTLAVDLLNRTLLSDFLPAQGMRGLGLYLIDRIGPLRRAVMREGVGPA
                     SRQPRLMRGEAL"
     gene            complement(4591..5679)
                     /locus_tag="VIY07_12465"
     CDS             complement(4591..5679)
                     /locus_tag="VIY07_12465"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY6382603.1"
                     /translation="MQPLSGLSVLDFTTLLPGPLATLMLAEAGAEIIKVEQPGGENAR
                     RFPPLVDGDSAAFLMLNRGKSSIELDLKSEADRTKLIPLIQRADILVEQFRPGVMSRL
                     GLGYEDVRSLNPRLIYCSISGYGQSGPRVSEAGHDINYIGNTGLLDLQPGPPEGPIVP
                     PMLAADIAGGSFPAVINILLALRARDQSGQGCRIDIAMTDAMFTFTWAALALGAATGK
                     FPKPGEMWLVGGSPRYQIYPAKDGKLVACGALEQKFWIAFAKAISLPQEFIDDTRNQN
                     ATRDAVARLIAARTSEEWRPIFAAADCCTTIITPLEQAMADPHFIQRGLFAHKVATAS
                     GKTLPALPLPVSPDFRQAPGVKKAPKLG"
BASE COUNT         1255 a         1617 c         1673 g         1220 t
ORIGIN      
        1 tcgggcagcg gaatcaaaac agggctgcga gttcctaagg gccaccggta aaagacccat
       61 ggaacccaga tcttgcgtta tcgttttacc tacatgagca cgctcgagat tgccattcat
      121 gtcgaagctt tggtcgtcgc cgcattcggc attctagttt ccttaagcgg cattgcctcg
      181 ttttgggctt tccgaaaaat tgctcgccta gccagctagg tcgctcgcct ccgccctaac
      241 gaagggccca atctctgggg gtgacggtcc ctattgttgt caggtgtcaa agcgctgtat
      301 cgatggcatg gtatcgcgta cgtatgagcg cggcaggcca ttaaacgcga gagatgaggc
      361 gccgggtcta gcggatgact ggcaaaacga aagaagagtt ttgggccgag ctcgaagcga
      421 ttggcgaaaa ggaagtgcga gagcgagtcg ccaagagagc gtatcgtgac ctcgaacaac
      481 aagatctgtg gtcccgcgag tggctattgc gtcgcgaatt caatcgcgag tttgcgtttg
      541 agcaaccgaa aattgccgcc gaaatagaac tggccaaagc aatgcgggcg gcatacgcca
      601 aggaacgcgg ggtcatcgag gcgactctgg cggcagccaa ggcggctgac cgacaagcga
      661 caattgcgac aaggatagct gtcgccgcgc tactcgtcgg gatagtggcg ctcgttttga
      721 gcgtattcct ggatctcaaa tagcgtttca gagtcagggc cacctgtaag cttggtcttg
      781 agggaactgt ctcaaagaga ctcgatgcgc cgtatcgggt ccgtcgaaat caaagtcaaa
      841 aatccgaagg cgcccgccgc tactcgcgcc gccgatggaa cattttgagc atctggcgat
      901 tgaccgatta agggagatac gcccgtggcg acccttcatc ataaagatca ggaccccgag
      961 cctacgaccc tgcagcacgt cctgacgttc tcgggcattg cggcgtgcat agctttgatt
     1021 ttctacgtga gctaacatgc ctgcgcggca ggccactaaa cctgctgctt tcattcatct
     1081 ctgttcccag ccgatacatg gcaaaacaac ctcccgtggg acctggtaga cagccgagag
     1141 gcttgcaatg aaaagggcct tgcttgcaat tgtagccttg cttttttcga cgcctatttg
     1201 ggcagcagaa ttttatatca tgcgtgatct cacgacacag aaatgtactg tggtggataa
     1261 gcgaccggtt accgccgtaa aaacgataac attggctagc gatgcaattt ataaaagccg
     1321 cgcagaggcc gagtccgcga tgagaaccat caaagtgtgc tcttctggga aatagcgcga
     1381 tactatctca aaatgttgcc ccaaggtcca acttcaatac tcggttcgat tgaatgataa
     1441 tatccgttac tggacaaaac gcctttagcc cgtaacgggg gtgaccgttg cgggcttttt
     1501 tggaagaagc atccaaaatc cgtagggagc ggcgatcatt gttctctcaa attcatattg
     1561 ccccaaggtc caacatctag cgacggaacc agcaaggccg gtcctcatct tattaggcat
     1621 gaatccaaac ctcgtgcttc ttggcttagc tgctatcggc gccgcttttg ggttggtttg
     1681 ggcattctat tacatgtcgt aaaatcagca gactcccgcg aatgttcctg tgtcaggtca
     1741 ctagcgcatc agtccgcgct cacggcgtcc gccagttgct tgtctagtgc ctcggcaagc
     1801 gccacggcag agcttcggct ggacaatgcc gtcgccgaac cggaaatgca cttacctcca
     1861 acagcgaaga tgtcgtgggt ctgtcgaatg tccgttatga gccaatagcg gacattttcg
     1921 gcgttttgga tttgcgctct aaaaagccta gcccctaacc cactagaaca acgacaaagc
     1981 caataaagcc agcggtagca ccagcaccag ctgctccaga tgtgccagac ggtgggatga
     2041 ccggcggggg ttccggcggc taataccaag cggacgccgt ggtcggtaaa gatgcagtca
     2101 gaacaacagc gcacatcagt gttgcggcgg taatgcgcaa catcccattg gtcctcacct
     2161 gatcaaggac aaacaggcgg attgctgagg acaaattgcc tcgctcgcgt ttgctgtcga
     2221 tctttgcgac caacgccgac accgtcgctc gttcagaacg agcgatttcc ttcaggccgc
     2281 tccagaaagg ttcttcaaga ctcacgctgg tcttgtggcg atcaatcatg acggagcgtt
     2341 tgacgactaa tgatttcatg tccgcctcct aaaaattttt aatgaaatca tttctgtggt
     2401 gattcgatac ggcgaggtcg gcagagaggt accttcttaa aattcgccac cgaattcttg
     2461 tcgcggtatc gaaacactat tcttatttta aaatcggaac ggtggtttca ggctactggg
     2521 cgacttgccg acgtcgagcg ccgatgccgg tgtacggttt gcggatggcg gcgagttgat
     2581 cttcgtcccg actaccgcaa gcaacacgag gcgccgcgca gcgtcggatg tatgatgcca
     2641 ccgccgaacc gcaaatgaga cttcacctcc gtgcgtctgt tgaatgtctg ctaagcgcca
     2701 caagcggaca ttcaacagtt cggctcacat gaaatgaaaa aaagcccggg acgttggcgg
     2761 acatcggacc tgccgggaac gccgattcag atgaacacag cagtactcgg tacggcgcgg
     2821 cattcaagcc gcgcatttgc cgcgcaccac ggcgtcgcga cagtcgcctc tctataaaag
     2881 gggcctcaat taaaaccctc gacgtaggcg cgcaccacgg cgacatcgcc agccccggcg
     2941 gcatagatgc cgatcgcgtg gatttcgtga ggcacttcgc agttcgggta tttccgcatg
     3001 tccatcatca tcgaggcgac cgcctcgcgc agttggccga cactgacaag cgcgagtgcg
     3061 tgctccttgc tccgcgcaac gtgttgttca cgtgttacgt agataccgtc agggatacgg
     3121 cagtgcgcgt tccaggttgc cattggccgt ccccctggcc gtcgctcagg caaggttaat
     3181 ttgaatgaat tcgtttgagg ggcgtatgaa ctagttcaca cttgctgggg ctttcgtgcc
     3241 gggaatttcg cgaaaagggc cgccacagca caaagcgatg tccgctttgg gtcaaaagca
     3301 gacattccgg gccgtcattc gtgtctgctt taccaccgaa gcatgctagc ggttaggaca
     3361 aaaacggagc gactgctcga tggcggaact atatggcgag agccggtcag ttgtcgtggt
     3421 aggccgcggg cccgccggat tgacggcggc gattgctctt gcgcagggcg gtctctcact
     3481 cgtccttgcc gggaacccgt cggccaaatc cgataaccga acaaccgcac tccttgccgg
     3541 ctctgtcacc gcgcttgaga cgctcggcgt ctggaacctt tgcgcagcgc aggcagcacc
     3601 tctcaaagtc atgcggatcg tcgacgacac ggggcggctc tggcgcgcac cggaggtcat
     3661 gtttcaggca agcgagatcg ggttggatgc gttcggctac aatattgaga accgctattt
     3721 gaccgatgca cttgagcaac gggctcgcgg tcttccggac ctgcatatca tcgacgatga
     3781 agtcctttca gctgtggaag atggacggac tgccgcggtc aagacgaggg atgaagccat
     3841 tctgcgcgcg tcgctcgtga ttggcgccga tggccgcaac tccatctgcc gcgccgccgc
     3901 cggaatcgga acggacgaac gtcgctatcc gcaggtcgca ttgacacttt gtgttcggca
     3961 ttctcgaccg catcaggaca cttccacgga atttcacacc cggacggggc cgttcacctt
     4021 ggtgcctttg cccggcaaac gatcgagcgt ggtttgggtg ctggatcgcg tttcggccga
     4081 agacgttgca gcattggacg atgcagaact cgcgagagag atcgaacggg cgtcacactc
     4141 gatagtcggg aaaatcgagg tcgagccagg gcgaggtcga tttccccttc acattgcaac
     4201 agcgcgacgt tttgccgaca agcgcatcgc actggtcgga gaagctgccc acgtcgttcc
     4261 gccgatcggc gcacaggggc tcaatatggg tctccgcgat gccgccacga tcagtgaagt
     4321 agcaatcgcg gcacatcgca atgggcttga tatcggcaac ccggatgtgc ttgcgcgata
     4381 tgagacgatg cgccaggccg atgtccgcag ccggaccctg gcggtcgatc ttctcaaccg
     4441 aacgctcctg agcgactttc ttccggcgca agggatgcga ggacttggcc tctacctgat
     4501 tgatcgcatc ggcccgctgc gacgtgcggt tatgcgggaa ggcgtgggac cagcatctcg
     4561 gcaaccccgt ctgatgcggg gcgaagcgct ctagccgagc ttcggcgcct ttttcacccc
     4621 gggcgcttgc ctaaaatccg ggctgaccgg cagaggcagt gccgggagtg tcttgccaga
     4681 cgcggttgcg actttgtgcg cgaacaatcc gcgctgaatg aaatgcggat cggccatggc
     4741 ctgttcgagc ggagttatga tcgtggtgca gcaatcggcc gctgcaaaga tcggacgcca
     4801 ttcctcggag gtcctcgccg caataagccg cgcgacggca tcgcgggtcg cattttgatt
     4861 tcgggtatcg tcgataaact cctgcggcaa tgaaatcgct ttggcgaagg caatccagaa
     4921 cttctgctcg agcgctccgc aagcaaccag tttgccgtcc ttggccggat agatctgata
     4981 acgcggcgag ccaccaacaa gccacatctc gcccggctta ggaaacttac cggtggcagc
     5041 gccaagtgcc agcgctgccc aggtgaaggt gaacattgca tccgtcattg caatgtcgat
     5101 gcggcacccc tgcccgcttt ggtcgcgcgc ccgcaaggca agcaaaatat tgatcaccgc
     5161 cggaaagctg cctccggcaa tgtcggccgc gagcatcggc ggcacgatag ggccctccgg
     5221 cgggcccggc tgaagatcga gcaagcccgt gttgccgatg tagttgatat cgtgcccggc
     5281 ctcgctcacg cgagggccgc tctggccata accggaaatc gagcaataga tcagtcgggg
     5341 gttgaggctt cggacgtctt cataaccgag gccaaggcgg ctcatcaccc cggggcgaaa
     5401 ttgttcgacc agaatatcgg cacgttggat gagcgggatg agtttcgttc ggtcggcctc
     5461 gctcttgaga tcaagttcga tgctgctctt gccgcggttg agcatgagaa acgccgcgct
     5521 gtcgccgtca accaagggag gaaagcgtcg ggcattctct ccgcccggtt gctcgacctt
     5581 gattatctct gcgcctgcct ccgcaagcat caatgtggcc agcggccccg gcaggagcgt
     5641 cgtgaaatcc agaacggaaa ggcccgaaag aggctgcatg gtggatgcaa tgtcccgtca
     5701 gcttgcctga ttttttgtgg tacacaatcg gcgataatta agcacgtatt tcggccagaa
     5761 gagac
//
LOCUS       DATDHO010000649         1898 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_30244, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000649 DATDHO010000000
VERSION     DATDHO010000649.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30244"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            185..1213
                     /locus_tag="VIY07_12470"
     CDS             185..1213
                     /locus_tag="VIY07_12470"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY6382604.1"
                     /translation="MRVEVEIEVGTKTFASGLLPDLIEAVRRSRPGNLFTIIGNDPEL
                     SEDLATWCRFTRNTLVETTKQANQTRWVIRCGEAPAESEADRPVGSRLWLYTNFDCNL
                     RCDYCCVRSSPKTPRRALGLERIKQIAKEAAELGVRDIFVTGGEPFLLPNIDEILLTC
                     AAAAPTTVLTNGMLFVGRRLDMLRTLPRDRITLQISLDSPTPGLHDRHRGEGTWARAL
                     RGIENARSAGFRVRLAATVSTDAEADAFRMFLDHHNVAIEDRVIRRIALRGFASDGIA
                     LARADLVPEITVTADGVYWHPVGAEDEDLLVSRDIFPLAEAFNAVRRAFDQEKDYERR
                     LAEIFNCA"
     gene            complement(1220..>1898)
                     /locus_tag="VIY07_12475"
     CDS             complement(1220..>1898)
                     /locus_tag="VIY07_12475"
                     /inference="COORDINATES: protein motif:HMM:NF024376.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HEY6382605.1"
                     /translation="VPYIDIAWNTNLAYLQADVWSGQRCRPIAMRDTDIGWMTKIVAA
                     TGGSVTTLADLRGRTLALGSRDSGHAAILPVYFLEKEGLQEGKDYRGLRFDSDVGKHG
                     DTGASEVEVVRAILDGRADAGAIGSPFWKAVQSERLVPQGALTEIWTSPPYNHCMFTA
                     RADLDPVLQQRFAEALSGMSYDNPKHRTVLEAEGLKRWVEPHLDGYESLREASARQGF
                     FRPSAQA"
BASE COUNT          396 a          550 c          559 g          393 t
ORIGIN      
        1 gtacacaaaa aaggcccaaa ctattggtcg tgacgtggga tgactacaag aaggctgggc
       61 ctctctttat ctcaaccgat caccggggca cggcggacgg gaagccggcg cgagttttct
      121 tttcggatgt ttccgtcaag gtgacaggat tagacagctg gatgaaagcg caatagaatt
      181 ttgaatgaga gtcgaggttg agatcgaggt tggtacaaaa acgtttgcgt cggggctgct
      241 tccagatttg atcgaagcgg tgcgccgcag tcgccccggt aacctcttca ctatcattgg
      301 caatgatccc gagttgagcg aggacctcgc aacttggtgt cgcttcaccc gaaacaccct
      361 agttgagacg accaagcagg caaatcagac ccgctgggtg atccgctgcg gcgaggctcc
      421 ggcggaaagc gaagccgatc gtcctgtcgg gtcgcggctg tggctctata ccaacttcga
      481 ctgcaatttg cgctgtgact attgttgcgt gcgctcttcg ccaaaaacgc cgcggcgggc
      541 gctcggcctt gagcgcataa agcagatcgc aaaggaagca gccgagttgg gcgtcagaga
      601 catcttcgtt accggcggcg agccctttct tctccccaac atcgacgaga tcctgttgac
      661 gtgtgccgcg gcagccccca caactgtact cactaatggg atgctgttcg ttggtcggcg
      721 gctagatatg cttcggaccc tgccacgcga tcgcatcacc ttgcagatca gtctcgacag
      781 cccgacgccc gggcttcacg accgccatcg gggtgagggt acatgggcgc gcgctctgag
      841 gggaattgag aatgctcgat cggcgggctt tcgagtacgg ctggcggcaa cggtatccac
      901 agatgcagag gccgatgcgt ttcgcatgtt cctggaccac cacaatgtcg cgattgaaga
      961 ccgagtaatt cgccgtattg cgctgcgcgg ttttgccagt gacggcattg cactcgcgcg
     1021 cgccgacctg gtgccggaga tcaccgtcac tgcagatggt gtttattggc atccggtcgg
     1081 agcggaggac gaagatctct tggtatcgcg cgacattttt cccctggcgg aagcttttaa
     1141 cgctgtgcgg cgcgcgttcg atcaagaaaa agactacgaa cgccggctgg cggaaatatt
     1201 caattgcgca tagcggcggt cacgcctggg ctgatggcct gaaaaatccc tgccgcgcag
     1261 aggcctcgcg caaagactcg tacccatcga gatgtggctc tacccaacgt ttaagcccct
     1321 cggcttccag tacggtgcga tgtttcggat tatcatagct catgccggac aacgcttcgg
     1381 caaaccgctg ctgcaacacc ggatcaagat cggcccgagc cgtgaacatg cagtgattat
     1441 acggcggcga ggtccagatt tcggtgagag caccctgcgg gacgagacgc tcgctttgca
     1501 ctgctttcca gaacggacta ccgattgccc cggcgtcggc gcgaccgtcg agaatagcgc
     1561 gaacgacctc cacctcactg gcaccagtat cgccgtgctt cccgacgtcg ctgtcgaagc
     1621 gcagcccgcg atagtccttt ccttcctgca gaccttcttt ctcaaggaag tataccggta
     1681 gaatcgcagc gtgcccgcta tcgcgactgc ccagagcaag cgtacgacct ctgaggtccg
     1741 cgagtgtagt aaccgagcca ccggtcgccg ccacaatctt tgtcatccag ccgatatcgg
     1801 tgtcacgcat ggcaattggc cggcagcgct ggccgctcca tacgtcggcc tgcagataag
     1861 cgagattggt attccaggcg atatcgatgt aaggcacg
//
LOCUS       DATDHO010000650         3197 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_279230, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000650 DATDHO010000000
VERSION     DATDHO010000650.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_279230"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1409)
                     /locus_tag="VIY07_12480"
     CDS             complement(<1..1409)
                     /locus_tag="VIY07_12480"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY6382606.1"
                     /translation="MRTVAAVVALVACVHAGLWALTRDNIRAPDFGGQLASISYAPFE
                     GSAHPDSGAKARAAQIRADLKLLAPLTRSVRTYSSTAGVELVPGIATEFGLRVTAGAW
                     VDKNQDRNDREIRSVIELTKRHSNINGIIVGNETIFRGEQKVPDLIQMIQRVKRATNV
                     PVTTGEIWHVWIEHPELVSAVDYIAAHILPYWEGFSETQAVDQAVLIYDKLRKAYPGK
                     RIVIAEFGWPSAGYNLKNANPGRIDQAVVLRDFVTRAEAYGIDYNIVEAIDQPWKIFE
                     GGVGPYWGVFDAARNSKFDWAGPITDPNHWRLAAIALLVSVLLSMPLLAMSAITVWQA
                     AMLAGAANVVGAWFAAVFGYWNGHYFVPGAAFALALGVVLLIPLIVIALARIEEIASI
                     AFGRKPLRLIASPPLAPESAAPKVSIHIPAHNEPPEMLMQTLDAVARLDYPNYECIVV
                     INNTSDPALWLPIEEHCRTL"
     gene            complement(1594..2085)
                     /locus_tag="VIY07_12485"
     CDS             complement(1594..2085)
                     /locus_tag="VIY07_12485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1-3, beta-1-6-glucan biosynthesis protein"
                     /protein_id="HEY6382607.1"
                     /translation="MPVSLKLRQLVAVLFYIAGACLVIPPAFAQSGNGKPAEPQKPAA
                     DTAKETQKKIDEIAEATRVLTGPAGNPECVWLGRRVVNLLWRDDLDTAFRHLDLYDRF
                     GCPSAHIQATFRCLVRQGNIDPKAQETLSGRVHACWLNPGLEPAAAEAAAPPATSGGT
                     TQR"
     gene            2362..>3197
                     /locus_tag="VIY07_12490"
     CDS             2362..>3197
                     /locus_tag="VIY07_12490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-(1-6) glucans synthase"
                     /protein_id="HEY6382608.1"
                     /translation="MRLAFACLALTAAAIAGFWTWLGSPALLMPTQLGRGEKLYCVSY
                     TPFRGAQTPLDPATMIPAGQIEDDLARLAQVTDCIRTYSVDFGLDQIAGIAAKHKLKV
                     MQGLWLSSNPAKSRYQIETAVTLANKYPDTISSVVVGNEVLLRGDMTATELANTIRAV
                     KARVRVPVTYADVWEFWLRNRDVANTVDFITIHILPYWEDFPIAARDALPHIEAIRRQ
                     VATAFPGREILLGEVGWPSAGRMREGALPSPANQARVIQEVLALSKRENFDVNIIEAF
                     DQP"
BASE COUNT          639 a          948 c          967 g          643 t
ORIGIN      
        1 agcgtgcggc aatgttcctc gatcggaagc cacagcgccg gatccgacgt gttgttgatc
       61 acaacgatgc attcataatt cgggtaatcg agacgcgcga ctgcgtcgag cgtctgcatg
      121 agcatctctg gcggctcatt atgcgcggga atgtgaatgg agacctttgg cgcagccgat
      181 tcgggcgcaa gcggcgggct tgcaatcagc cgaagcggct ttcgtccgaa tgcaatagac
      241 gcgatctcct cgatgcgcgc gagcgcaatg acgatcaacg ggatcaagag caccacgccg
      301 agtgcaagcg cgaaagcggc gccgggcacg aagtagtgtc cgttccaata gccgaaaact
      361 gccgcgaacc acgcacctac tacatttgct gcgccggcca acatggccgc ctgccagacg
      421 gtgatggcac tcatcgcgag caagggcatg gacagcagta cactcaccag cagggcaatc
      481 gctgcaagcc gccagtgatt tggatcggtt atcgggccgg cccaatcgaa ttttgaattg
      541 cgcgcggcat cgaatactcc ccaataggga ccgacaccgc cttcgaagat tttccagggc
      601 tgatcgatcg cttcaacgat gttgtaatcg ataccgtagg cctcggcgcg cgtgacgaag
      661 tcacgcaaca ccacggcctg gtcgatgcgt ccagggtttg cgttcttgag attatagccg
      721 gcgctcggcc atccgaactc ggcaatgacg atacgcttgc cggggtacgc tttgcgaagc
      781 ttgtcataga tcagcacggc ctgatcgacg gcttgcgttt ccgagaatcc ttcccagtag
      841 ggcagaatgt gtgccgcaat gtagtcgaca gccgaaacca gttctggatg ttcgatccac
      901 acgtgccaga tttcacctgt cgtgacgggc acgttggtcg cgcgcttcac gcgctggatc
      961 atctggatga gatcggggac cttctgctcg ccgcgaaaga tggtttcgtt gccgacgatg
     1021 atgccgttga tgttgctgtg gcgcttggtg agctcaatca ccgaacggat ttcccgatca
     1081 ttgcgatcct ggttcttgtc gacccaggcg ccagccgtaa cccgcaaccc gaattcggtt
     1141 gcgatcccgg gaacgagttc tacgccggcc gtcgacgagt atgtccggac cgatcgggta
     1201 aggggagcaa gcagcttgag atcagcgcga atttgcgcgg cgcgcgcctt ggcgccggaa
     1261 tcgggatgcg ccgaaccctc aaacggagcg taggaaatac ttgccagctg gccaccgaag
     1321 tcgggcgcgc gaatgttgtc gcgcgttaaa gcccacaaac cggcatgcac gcacgccaca
     1381 agggcgacca cggcagcgac ggtgcgcata ctcgtcaaaa ccaagtgggg caggatggca
     1441 gaccctcgaa cccgtcccct gggctcagcc gacgctccgt ctgcaacggc ggaacgtagc
     1501 gcggcgtaag gtagacattc aagtaatcag gcgtcatggc aattcctagg cacccgcatg
     1561 gcgccaaact aattttcctt aacgcaacgc cggctagcgc tgggttgttc cgcctgaggt
     1621 ggcgggaggg gcagcggcct ctgctgcggc tggctccaga ccagggttaa gccagcaggc
     1681 gtgcacccgt ccgctaagcg tttcctgggc cttgggatcg atgtttcctt gcctgaccag
     1741 gcagcgaaaa gtggcctgga tatgggcgct cgggcagccg aagcgatcgt aaagatcgag
     1801 atggcggaag gcggtatcga ggtcgtcacg ccagagcagg ttaaccaccc ggcggcccag
     1861 ccagacgcat tcgggattgc cggccgggcc cgtcaggacg cgggtggcct cagcgatctc
     1921 gtctatcttt ttctgggttt ctttggctgt gtcggcggcc ggtttttgcg gctccgcggg
     1981 cttgccgtta ccgctttgtg cgaaggccgg gggaatgaca agacaagcgc cggctatgta
     2041 aaacaacacg gcgaccaact gacgcaactt gagagaaacc ggcattgtcc ccgtcgactg
     2101 ttcgtttttt aacttaaccc tcttccctgg gcgctttttg tgcgacccga ttgggacgct
     2161 aatacggcgg tgatttacct tgtaaatcgg cgacctcaat cgggcgccct ttaacagtag
     2221 ttgtaacgtg tgagttggcc ttaacctgcg ttctttgtct agcttaactg catttcgtcc
     2281 ttaagacatg cgtgcttggc aggagcgggc ttgcgcgata agcggttgcg caaacgactg
     2341 gcgtcccgat tggattttcg aatgcgttta gccttcgcct gcctggcgct cacggcggcg
     2401 gccatagcag gtttctggac ctggcttggc agcccggcac tcctgatgcc aacccagctt
     2461 ggccgcggcg aaaagctcta ctgcgtgtct tacaccccgt ttcgcggtgc acagacgcca
     2521 ctggatcccg ccacgatgat cccggccggc caaatcgagg acgatctcgc ccgcctcgct
     2581 caggtcacgg actgtatacg cacttactcg gtggatttcg ggctcgacca gattgccggg
     2641 attgccgcca agcacaagct gaaggtcatg caaggtctgt ggctgtcgag caatccggcc
     2701 aaaagccgtt atcagattga aacggccgtc accctcgcca ataaatatcc tgacaccatc
     2761 agctctgtcg tggtcggcaa cgaggtgctg ctgcgtggcg acatgaccgc gacagagctg
     2821 gccaacacca tccgcgccgt caaggcgcgc gtgcgcgtgc ccgtaaccta tgcggacgta
     2881 tgggaattct ggctgcgtaa tcgcgacgtg gcaaacactg tcgacttcat cacgatccat
     2941 atcttgccct attgggagga cttcccgatc gcggcgcggg atgcgctgcc gcatatcgag
     3001 gcgatccgcc gccaggtcgc aactgcattt cccggtcgcg aaatcctgct cggcgaagtc
     3061 ggctggccga gcgccggccg catgcgcgaa ggggcgcttc catctccggc caaccaggca
     3121 cgggtcattc aggaggtcct tgcgctgagc aagcgcgaga atttcgacgt caacatcatc
     3181 gaggcattcg atcagcc
//
LOCUS       DATDHO010000651        11061 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_472838, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000651 DATDHO010000000
VERSION     DATDHO010000651.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 11061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11061
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_472838"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(154..1326)
                     /locus_tag="VIY07_12495"
     CDS             complement(154..1326)
                     /locus_tag="VIY07_12495"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEY6382609.1"
                     /translation="MIFSRDRILTTHVGSLPRNEALSDLLMAQEEGKNYDPAELASQM
                     DQAVRHVVAKQMEAGIDVGNDGEQRRISFQTYVPQRMTGFAGVSKRRRGREFEEFPEL
                     LAYLMRRFPNPAKSQQGAREAQADIKYKDLKPITEEVAGFKKIADDLGAFSERFMTAP
                     SPGIISTTMLNAFYKSHDDYLDAIAREMKNEYQTIHKAGLLLQIDAPDLAMDRTMMYR
                     DLDDAGFVKRVERHVQAINDGIAGIPRERVRLHVCYGNWEGPHIHDVPLEKILPALYQ
                     ARVGALSIEFSNPRHAHEYDAIKKHPLPKDMLLIPGVVETTSNFVEHPEVVARRIEEA
                     VRAVGERERVIASTDCGFGTFTKREWVIEPVVWLKLAAIRQGADIASARLWGKKVA"
     gene            1405..3000
                     /locus_tag="VIY07_12500"
     CDS             1405..3000
                     /locus_tag="VIY07_12500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HEY6382610.1"
                     /translation="MTVAEARAAEPDAAASVGSVPRDYNFAADVLQRNLDAGRTNKPA
                     YVDARGAHTYGQLADRVARFGAVLRGLGIKREERVLLALLDTIDWPTAFLGCLKTGIL
                     AVPVNTLLTEDDYRFMLSDSRAKCLVVSEALFPKFEKLIKQSPDLEHVIVSGDNPHGY
                     RLLEDVIGAGEPEPYTAPTTCDDIAFWLYTSGSTGKPKGAVHVHASLKLTADLYGTPV
                     VGLKESDVCYSVAKLFFAYGLGNAMTFPLTVGATTVLNAERPTPDGVAALLRKHPITV
                     FFAVPTFYAAFLANPNAPQKSEVKIRRCISAGEALPEEIARRWKDRYDVEISDGLGTT
                     EMLHIYLTNAPGATKYGTTGRSVPGYEIKLVGDDGQPVKKGEMGELYVRGPTSAIMYW
                     NNRDKSRSTFQGEWTRSGDKYIEDAEGYYVCCGRQDDMLKVSGMYVSPFEVEAVLSSH
                     PDVLEAAVVGWNDEQKLIKPKAFVVLKSPEKASDALVQALQEHVKEKLAPYKYPRWIE
                     FRKDLPKTATGKIQRFKLRAEGK"
     gene            3120..3932
                     /locus_tag="VIY07_12505"
     CDS             3120..3932
                     /locus_tag="VIY07_12505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6382611.1"
                     /translation="MTKLPNSGFLTIGQQQLEYRFIGPRPDEAPTLVLLHEGLGCVGL
                     WNDFPDKLSAATGAGVFVYSRAGYGKSSAVRLPRPLSYMHDEARETLPRVLEAIGFQR
                     GLLIGHSDGASIAAIYAGSHQDHRIGGLVLIAPHFFTEDPGLASIAEAKEAYATGDLR
                     ARLSRWHADVDNAFKGWNDAWLDPEFRKWDITEFLAYVRVPVLIVQGEDDQYGTAKQI
                     EVAQQECYCPVEVALLPGARHSPQREAPEPTLKTISEFVARALQANEWVRAA"
     gene            3933..4235
                     /locus_tag="VIY07_12510"
     CDS             3933..4235
                     /locus_tag="VIY07_12510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEY6382612.1"
                     /translation="MGAYVYILSCADGSYYVGSATGSDLNQRVSEHQSGVRPGYTQSR
                     RPVQLVWSEYFDRITDAIAAERQLKGWSRAKKNALILGDWQSVSRLSKRRGGKPKP"
     gene            complement(4372..5580)
                     /locus_tag="VIY07_12515"
     CDS             complement(4372..5580)
                     /locus_tag="VIY07_12515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY6382613.1"
                     /translation="MAKNSSRPVGRHFLHIPGPTPLPDRILRAMDTPIIDHRGPEFAR
                     LAKKCLEGIKTIFKTTNPVIIYTATGTGAWEAALVNTLSPGDKVLMVETGQFATLWKK
                     MAEKIGLVPEFITTDWRIGADPAAIEARLREDKRKEIKAVCFLHNETSTGCLSPVAEI
                     RKAIDKAGHPALLMVDTISSLASADYRHDEWGVDVCIGGAQKGLMLPPGMSFNAISDK
                     ALAANKTSQLTKSFWAWDEMLMMNKQGFFPYTPATQMLHGLAAGIEMLHEEGLDNVFA
                     RHDRLAEATRRAVKTWGLEIICRDPKYYSPTITGVLMPEGHDADAFRALALEQFNISY
                     GSSFGRFAGKMFRIGHLGDINDAMLLGGLAATEMALALANVPHKKGGVQAAMDYLVSA
                     QGSAAKQAAE"
     gene            5778..8720
                     /locus_tag="VIY07_12520"
     CDS             5778..8720
                     /locus_tag="VIY07_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY6382614.1"
                     /translation="MPGLERRLKAELTGEVQFDRFTRGRYATDASHYQIMPIGVVAPR
                     TIEEADRAIAIARGEGAPVLARGGGTSQAGQAVGKSLVIDCSKYLTRILDLDVKRARC
                     TVEPGIVLDELNRQLKPHGLWFPVDISTSSRATIGGMAGNNSCGGRSMRYGTMRDNVI
                     SIEALLADGTLAHFGRIGGSLKDVPAPLRPLAKDLLAIGAREAGEIAERFPKVQRRVG
                     GYNLDALVPGKNDINLAHVLVGGEGTLAFSTRIELKLSPLLGRRAVGACHFGSFYEAM
                     NSAQHIVRLKPIAVELIDRTMIGLVRQISIFRPTLEKFVRGTPEAILLVEFGEEDHEV
                     NLRLLQQLKDLMGDLGFGWDKNGAKWGGVVEVLNPDLQAAITEVRTSGLNIMMSMKEE
                     GKPVSFVEDCAVPLEHLADYTSRLTRIFEKHGTRGTWYAHAGAGCLHVRPILNLRQEK
                     DVHSMREIAEEAFAMVREYKGSHSGEHGDGLVRSEFNEPMFGARLARAFEEVKDRFDP
                     KGVFNPGKIVRAPQFDDRGLFRYPPDYHGETFKTHLDWSAYPGTGGGLQGAAEMCNNN
                     GACRKLTGGVMCPSYRVTRDERDVTRGRANTLRLAITGQLGPAALLSDEMAATLKLCV
                     SCKACRRECPTGVDMARMKIEVQAARAAKFELSLHDKLVGFLPHYAPFASRWHNFFNM
                     RDRSALLRRASELVAGFSASRSLPKWREDTYLDRSDWRYTTREENAQAREIVLFADTF
                     NRYFERENLDDALSVLVAGGYRVYAPLPPDHNDRPLCCGRTFLAVGLVDEARREMQRT
                     MDILAPYLARGLPIIGLEPSCLLTFRDELPALFKGEVADALAANALLFEEFLAREQKE
                     GKLKLPLGQLPKKALLHGHCHQKAFDAMGGVESVLRLIPQLSVEAVESSCCGMAGSFG
                     YDVSTIDISRKMGELSLLPAVRRAGTDTLIVADGTSCRHQIYDGAEREAVHVARVLAM
                     SVAAAASS"
     gene            8836..9867
                     /locus_tag="VIY07_12525"
     CDS             8836..9867
                     /locus_tag="VIY07_12525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine methyltransferase"
                     /protein_id="HEY6382615.1"
                     /translation="MAKLFPTSLVGSYAQPDWLIDRAKLASRFPPRVRAKELWRVAPD
                     YLKQAQDDATLLAIRDQERAGLDIITDGEMRRESYSNRFATALEGVDIENPGTALDRS
                     GHPNPVPRVTGKVRRRHPVEVEDVKFLRANTDRTIKMTVPGPFTMSQQAQNDFYKDDE
                     EMAFDYAAAVNAEVKDLFAAGADIVQIDEPYMQARPEKARQYGLKALNAALDGVNGPT
                     AVHICFGYAAIIHVRPEGYSFLPELAGSSVKQVSIETAQSKLDCTVLEKLSDKTIILG
                     TLDLSDMTVEKPETVAARIRRALPHVAAERIIVAPDCGLKYLPREVAYGKLCAMVEGA
                     NIVRAELSK"
     gene            9870..10904
                     /locus_tag="VIY07_12530"
     CDS             9870..10904
                     /locus_tag="VIY07_12530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HEY6382616.1"
                     /translation="MPAKLFPTSLVGSYPQPDWLIDRARLSKMVPRVRMDDLWLIGTK
                     ELEEKQDEATLLAIRDQERAGLDIITDGEQRRESYSNRFATALEGVDTANPGSTLNRS
                     GKPIPVPRVIGKIRRKYPVQLRDLQFLRANTKRLVKMTVPGPFTMSKQAQNEFYKSDE
                     AMALDYAAAVNDEIQDLFAAGADIVQIDEPWMQQHPDRAREYGLKALDRALDGVTGTV
                     AVHLCFGYAAVVHDKPTGYSFLSELEGSRAGQISIEAAQPKLDLGVLKTLPSKTIILG
                     VIDLSDMGIETPDTVAARIRNALAHVSADRIVIAPDCGMKYLPREVAYGKMQAMVRGA
                     SIVRLEESDD"
BASE COUNT         2185 a         3257 c         3420 g         2199 t
ORIGIN      
        1 agcctgcggt cgatccggtc ttccggcatt cgctgccccc gaatgtcgca agaacgtagc
       61 atagcggaaa caggaccgtc actggcgggc tggcactatt gcgccgtgtt gaagcttatc
      121 gaagccgtct tcgtgatctc gaacttgcgt tgctcacgcg actttcttgc cccaaagccg
      181 tgctgacgca atgtcggcac cctgacggat cgcagccagc ttcagccata ccacgggctc
      241 gatcacccat tcgcgctttg tgaacgtgcc gaagccgcag tcggtcgacg caataacgcg
      301 ctcgcgttcg ccgaccgcgc gcactgcttc ctcgatgcgc cttgcaacga cttcggggtg
      361 ctcgacaaaa ttgctagtgg tctccaccac gccggggatc agcagcatat ctttgggcag
      421 cggatgcttc ttgatcgcgt cgtattcgtg cgcatgacgt ggattggaaa actcgatcga
      481 cagcgcgccg accctggcct ggtaaagcgc cggcaggatt ttttcgagcg gaacgtcgtg
      541 aatgtgcggg ccctcccagt tgccataaca aacatgcaga cgaacgcgtt cgcgcggaat
      601 tccggcgatg ccgtcgttga tcgcctgcac atgccgttcc acgcgcttca cgaatccggc
      661 gtcatcgagg tcgcgataca tcatggtgcg atccatggcc aggtccggcg catcgatctg
      721 caacaacagc ccggctttat ggattgtctg atattcgttc ttcatctcgc gtgcgatcgc
      781 atcaagataa tcgtcgtgag acttgtagaa tgcgttgagc atcgtggttg aaatgatgcc
      841 gggcgacggc gcggtcatga agcgctcgga aaaggcaccg agatcatcgg cgattttctt
      901 gaagcctgcc acctcctcgg taatcggctt gaggtccttg tatttgatgt cggcctgggc
      961 ctcccgcgca ccctgctggc tcttggccgg attgggaaac cgacgcatca agtaagcaag
     1021 cagttcgggg aattcctcga attcgcggcc gcgccgccgc ttcgacacgc cggcgaaacc
     1081 ggtcatgcgc tgtggcacat aagtctgaaa gctgatccgc cgctgttccc cgtcattgcc
     1141 gacgtcgatg ccggcttcca tctgcttggc aacaacatga cgaacggcct ggtccatctg
     1201 ggatgccagc tcggctgggt cgtagttctt gccctcttcc tgcgccatca gcagatccga
     1261 cagtgcttcg ttccgcggca ggctgccgac atgcgtggtc agaatgcggt ccctgctgaa
     1321 gatcatgcgc gaagctcctt ttccctcgac gttgcagcgt ttcctcgccc cctgcataat
     1381 acgaacctct cgggaggaac aacaatgacg gtcgcggaag cgcgcgcggc tgaaccggat
     1441 gcggctgcat cagtgggctc agtcccacgc gactacaatt tcgctgccga tgtcctgcag
     1501 cgcaatctcg atgccggccg taccaacaag ccggcctatg tcgacgcgcg cggcgctcat
     1561 acttatgggc agctcgccga tcgcgtagcg cgttttggag ctgtcttgcg cggacttggc
     1621 atcaaacgcg aggaacgcgt gcttttggct ctgctcgata ccatcgactg gccgacggcg
     1681 tttctcggtt gtctgaaaac cggcatcctt gcagtgcctg tcaacacgct gctgaccgag
     1741 gacgactatc gcttcatgtt gtcggatagc cgcgcgaaat gcctcgtggt gtcggaggcg
     1801 ctgtttccga aattcgaaaa gctgatcaag caaagcccgg atctcgagca tgtcatcgtg
     1861 tcgggcgaca atccgcacgg ctatcgactg ctcgaggatg tgattggcgc tggcgagccg
     1921 gagccgtata cagccccgac cacctgcgac gacatcgcat tctggctgta cacatcgggg
     1981 tcaaccggaa agccgaaagg cgcggtacat gttcacgcga gtctcaaact gacagccgat
     2041 ttgtatggca cgccggttgt cgggcttaag gaaagcgacg tgtgctattc ggtcgcgaaa
     2101 ctgtttttcg cttacggcct cggcaatgca atgacattcc ctctgacggt cggtgcgacg
     2161 actgtcctga atgccgaaag gccgacgccg gacggagtgg cggccttgct gcgaaagcac
     2221 ccgatcacgg tgttctttgc ggtgccgact ttttatgcag catttctggc caatccgaac
     2281 gcgccgcaaa aatcggaggt gaagatccgt cgttgcatct cagccggcga agcgttgccc
     2341 gaggaaatcg cgcgccggtg gaaagaccgt tatgacgtcg aaatttccga cggactgggc
     2401 acgacggaga tgcttcacat ctatctcacc aatgcaccgg gagcgaccaa gtacggcact
     2461 accggcaggt ccgtgccggg ctacgagatc aagcttgtcg gcgacgacgg ccagcccgtg
     2521 aagaaaggcg agatgggcga actttacgtg cgcgggccca ccagtgcgat catgtactgg
     2581 aacaatcgcg acaaatcgcg ctctaccttc cagggtgaat ggacccgttc gggcgacaaa
     2641 tatatcgagg atgctgaggg ctattacgtt tgctgcggac gtcaggacga catgttgaaa
     2701 gtatccggga tgtatgtatc cccattcgag gtcgaggccg tgctgtcgtc acatcccgat
     2761 gtcctcgagg cggcggtcgt cggctggaac gacgagcaaa aactgatcaa gccgaaagca
     2821 tttgtggtgc tcaaatcgcc ggagaaggcc agtgatgcac tcgtccaggc gctgcaggag
     2881 catgtgaagg agaagcttgc gccttacaaa tacccgcgtt ggattgaatt tcgcaaagac
     2941 ttgccaaaga cggcgacggg caagatccag cggttcaagc taagagcgga aggaaaataa
     3001 tgggcacggc tgcgtcatcc tgaggtggct gcgcgcagcg cggccctcga aggatagacg
     3061 gcgtcgtcct tcgaggctcg cttcgctcgc acctcaggac gacgggtcaa gagagtgcga
     3121 tgacaaaact cccgaactcc ggttttctca ccatcggcca gcaacaactg gaataccgct
     3181 tcatcggacc gcggcccgac gaagcgccca cgcttgtttt gctgcacgaa ggcctcggtt
     3241 gtgtcgggct ttggaacgat tttccggaca agctttcggc tgcgacggga gcaggcgtat
     3301 tcgtctattc gcgcgccggg tatggcaagt cgagtgccgt caggctgccg cggccgctct
     3361 cgtatatgca cgatgaggca cgcgagacgc tgccgcgcgt gctcgaagcc atcggctttc
     3421 agcgtggcct gctgatcggc cacagtgacg gggcttcgat cgcggcgatc tacgcgggca
     3481 gtcatcagga ccatcggatc ggcggcctcg tgctcatcgc tccccatttc ttcaccgagg
     3541 atccaggctt ggcctccatc gcggaggcga aggaagccta cgcgacgggg gacctgcgtg
     3601 cacggctttc gcgctggcat gccgacgtcg acaatgcatt caaaggctgg aatgacgcat
     3661 ggctcgatcc tgaattccgc aaatgggata tcacggaatt cctggcttat gttcgcgtcc
     3721 cggtgctgat cgtgcagggc gaggacgatc agtacggcac cgcgaagcag atcgaggtgg
     3781 cgcaacagga gtgttactgc ccggtcgaag ttgcattgtt gcccggcgcc cgccattcgc
     3841 cgcagcgcga ggcgcccgag ccgacgctca agacgatttc ggaatttgtc gcccgtgcct
     3901 tgcaggcgaa tgagtgggtg agggcggcgt aagtgggagc gtacgtatat attttaagct
     3961 gcgctgatgg ctcgtattac gttggtagtg ctacaggctc cgatctcaac caacgcgttt
     4021 ccgaacacca atcaggcgtc cggccgggct atactcagtc acgtcgtccc gtgcagctcg
     4081 tttggtcaga atattttgat cgcatcacgg acgcgatcgc ggcggagcgc caattgaaag
     4141 gctggagccg cgccaagaaa aacgcattga tactgggcga ttggcaatcc gtaagccgac
     4201 tatcaaagcg acggggaggc aagccgaagc cttgatccgt catcctgagg agcgagcgcg
     4261 aagcgcgagc ctcgaaggat gaccgccatt gagatgtctg ggccgtcacc cttcgagggc
     4321 cgcgctgcgc gcggccacct cagggtgacg gatcaaagca tctttgttag atcactccgc
     4381 cgcctgtttt gcggcgctgc cttgcgcaga gacgagataa tccatcgccg cctgcacgcc
     4441 gcctttcttg tgcgggacgt tcgccagcgc caacgccatt tcggtcgctg ccaaaccgcc
     4501 gagcagcatc gcgtcgttga tgtcgccaag gtgcccgatg cggaacatct tgccggcgaa
     4561 gcggccgaag ctcgacccgt acgagatgtt gaactgctcg agcgccagcg cgcggaacgc
     4621 gtcggcgtcg tgtccttcgg gcatcaggac gccggtaatt gtcggggaat aatacttcgg
     4681 gtcccggcag atgatctcga ggccccatgt cttgaccgcg cggcgggtcg cctccgcgag
     4741 gcgatcgtgg cgggcgaaca cgttgtccag cccttcctcg tgcagcatct cgatgccggc
     4801 agcgaggccg tgcagcatct gggtcgccgg cgtatagggg aagaagccct gcttgttcat
     4861 catcagcatt tcgtcccagg cccaaaacga cttcgtgagc tgggacgtct tgttagcggc
     4921 cagcgccttg tcgctgattg cgttgaacga catgcccggc ggcagcatca gacctttttg
     4981 cgcgccaccg atgcagacgt cgacgcccca ttcgtcgtgc cggtaatccg ccgaagccag
     5041 ggaggagatg gtatccacca tcaagagcgc gggatggcca gccttgtcga tcgccttgcg
     5101 gatttccgcc accggggaaa ggcacccggt ggaggtttca ttgtgcagga agcagaccgc
     5161 cttgatctcc ttgcgcttgt cctcgcgcag gcgcgcctcg atcgcggcgg ggtcggctcc
     5221 gatgcgccag tccgtcgtta tgaactcggg aaccaggccg attttctccg ccatcttttt
     5281 ccagagcgtg gcgaactggc ccgtttccac catgagcacc ttgtcaccgg gcgagagcgt
     5341 attgacgagg gcggcttccc aggcgccggt gccggtcgcg gtgtagatga tgaccggatt
     5401 ggtggtcttg aagatggttt tgatgccctc caggcacttc ttcgcgagcc gcgcgaattc
     5461 cggtccacgg tggtcaataa tgggggtgtc catcgcccgc aggatgcggt ccggcagcgg
     5521 cgtaggcccc ggaatgtgca aaaaatgtcg accgaccgga cgcgaggaat tcttggccat
     5581 aggcagtctg ctcctgaaac ggcacctttc atggggattt cgtggtttag ccacgggcgc
     5641 gtcccaatca gggagcagcg cttgtggcgt tgaactatga atgcaacatt gcggtcaagc
     5701 agttttccgc aaggcaacct agcccttatg cataggcttg gcgcagccca aaaaggataa
     5761 aaaacgtggc cgtacttatg cccgggctgg aacgtcggct aaaagccgaa ttgaccggtg
     5821 aggttcagtt cgaccggttc acgcgcgggc gctatgccac cgatgcatcc cactaccaga
     5881 tcatgccgat cggcgtggtc gctccccgca cgatagaaga agccgatcgg gcgattgcga
     5941 tcgcgcgtgg cgaaggagcg ccggttctgg cgcgcggagg cggcacgtcg caggccggac
     6001 aggccgtcgg gaaatcgctc gtcatcgact gttcgaaata cctgacgcga attctcgacc
     6061 tcgacgtcaa gcgggcccgc tgcacggtcg aacccgggat cgtcctcgat gagcttaata
     6121 gacagctcaa gccgcacgga ttgtggtttc cagtcgatat ctcgacctcc tcacgcgcca
     6181 cgattggagg catggccggc aacaattcct gtggcggccg ttcgatgcgc tacggcacca
     6241 tgcgcgacaa cgtgatctcg atcgaggcgc tgctcgcgga cgggacgctc gcgcatttcg
     6301 ggcgcatcgg tggaagctta aaagatgtgc cggccccttt gcgcccgctc gcgaaagatc
     6361 tgctcgcaat cggagcgcgc gaggcggggg agatcgccga gcgttttccg aaagtgcagc
     6421 gccgcgtcgg cggctacaac ctcgatgccc tggtcccggg aaaaaacgat atcaatctcg
     6481 cgcatgtgct ggttggcggc gaaggcacgc tcgcgttctc tacgcgtatt gaattgaagc
     6541 tctcgccttt gctcggccgc cgcgcggtcg gcgcctgtca tttcggcagc ttctacgagg
     6601 ccatgaactc ggcgcagcat atcgtgcgcc tcaagccgat cgcggtcgag ctgatcgacc
     6661 gaacgatgat cgggcttgtg cgccagattt cgatcttccg gccgacgctc gagaagttcg
     6721 ttcggggaac tccggaagcc attctcctgg tcgaattcgg cgaggaggat cacgaagtca
     6781 acctgcggct gctgcagcag ctgaaggatc tgatgggcga tctcggcttc ggctgggaca
     6841 agaacggcgc gaagtggggc ggcgtggttg aagtgctcaa tcccgacctg caggccgcga
     6901 ttaccgaggt gcgcacgtcg ggcctcaaca tcatgatgtc gatgaaagag gaggggaaac
     6961 ccgtatcctt cgtcgaagac tgcgcagttc cactcgagca tctcgccgac tacacctcgc
     7021 ggctcacgcg gatcttcgag aagcatggga cgcgtgggac ctggtacgcg catgccggcg
     7081 ccggctgtct ccatgttcgc ccgatcctga atctgcgcca ggagaaagat gtgcacagca
     7141 tgcgcgagat cgccgaagag gcgttcgcga tggtgcgcga atacaaggga tcgcattccg
     7201 gcgaacacgg cgacgggctt gtgcgttcgg agttcaacga accgatgttc ggtgcgcggc
     7261 tcgctcgcgc cttcgaggag gtcaaggacc ggttcgatcc caaaggggtc ttcaatcccg
     7321 gcaagatcgt gcgagcaccc caattcgacg atcgcggtct cttccgttat ccacccgact
     7381 atcacggcga gacgttcaag acgcacctgg actggtcggc ttatccgggc acgggcgggg
     7441 gtctccaggg cgccgccgag atgtgcaaca acaacggcgc ctgccgcaaa ttgaccggcg
     7501 gggtgatgtg ccccagttac cgcgtgactc gggacgagcg cgacgtcacg cgtgggcggg
     7561 cgaacaccct gcggctggcg atcaccgggc aacttggtcc ggccgcgctc ttgtcggatg
     7621 aaatggctgc gacattgaag ctttgcgtct cctgcaaagc gtgccgacgc gaatgcccta
     7681 caggcgtcga catggcgcgg atgaagatcg aggtgcaggc tgcgcgcgcc gcgaagtttg
     7741 agctgtcact ccacgacaag ctggtgggtt ttctgccgca ctatgcgccg tttgcttcac
     7801 gttggcataa cttcttcaac atgcgcgatc gaagtgcgct tttgcgcagg gcatcggagc
     7861 tggtcgccgg tttttccgcg agccgcagcc tgccaaaatg gcgcgaggat acttacctgg
     7921 accgctccga ctggcgttac accacgcggg aagaaaatgc gcaggcgcgc gaaatcgtgc
     7981 tcttcgccga cacgttcaac cggtacttcg agcgcgaaaa cctggacgat gccttgagtg
     8041 ttctggttgc cggcgggtat cgcgtttatg cgccgctgcc gcccgaccac aatgatcggc
     8101 cattgtgctg cgggcgcacc ttcctggcgg tcggcctggt cgatgaagcg cggcgtgaaa
     8161 tgcagcgtac aatggatatt cttgccccgt acctcgcgcg cggattgccg atcatcggcc
     8221 ttgagccgag ctgcctcctt acgttccgtg acgaactgcc cgccttgttc aagggcgagg
     8281 tggcggatgc actcgctgca aatgcgttgc tgttcgagga gtttttggcc cgggaacaga
     8341 aggaaggcaa actgaagctg ccgctagggc aattgccgaa gaaggcactc ctccacggcc
     8401 attgtcatca gaaagcgttc gacgccatgg gcggggtcga aagcgtcctt cgcttgatcc
     8461 cgcagctttc ggtcgaagcc gtggaatcga gctgctgcgg catggcgggc agcttcggct
     8521 acgatgtcag cacgatcgat atttcgcgaa aaatgggcga actgtcgttg ctgcccgcgg
     8581 tccgccgggc cggcaccgat acgctgatcg tcgcggatgg cacttcgtgc cgccatcaaa
     8641 tctacgatgg tgcggaacga gaggctgttc atgtcgctcg cgtgcttgca atgagcgtcg
     8701 cagcggctgc gtcatcctga ggtggccgag cgaagcgagg ccctcgaagg atgaaggggc
     8761 atttcttcag gccgtcatcc ttcgaggctc gcgctccgcg ctcgctcctt aggatgacgg
     8821 aaaaggtagg tgcgtatggc caaactattc cccacctctc tcgttggctc ctacgcgcag
     8881 ccggattggc tgatcgaccg cgccaagctg gcgagccgct ttccaccgcg ggtgcgcgcc
     8941 aaggagcttt ggcgcgttgc cccggattat ctgaagcagg cgcaggacga tgcgaccttg
     9001 cttgcgatcc gcgatcagga acgcgccgga ctcgacatca tcactgacgg cgaaatgcgc
     9061 cgtgaaagtt attccaatcg gtttgccacg gcgcttgaag gcgtcgacat cgaaaatccc
     9121 ggcacagcgc tcgaccgctc aggccacccc aatccggtgc cgcgcgtcac aggcaaggta
     9181 cgccgtcggc atcccgtcga ggtggaagac gtgaaattcc tgcgggccaa cacggaccgc
     9241 acgatcaaga tgacggtgcc tggccctttc acgatgtccc agcaggctca gaacgatttc
     9301 tacaaagacg atgaggagat ggcattcgac tatgcggcgg cagtgaacgc cgaggtcaag
     9361 gatctgttcg cagccggagc cgatatcgtt cagatcgatg agccctatat gcaggcacgg
     9421 ccggaaaagg cgcgccaata tggtctcaag gcgctcaatg ctgcgcttga cggagtcaac
     9481 gggccaaccg cagtccatat ctgtttcggt tatgccgcaa tcattcatgt gcgcccggag
     9541 ggatattcgt tcctgccgga gttggccgga tcgtcggtca agcaagtttc catcgagacc
     9601 gcgcaatcca agctcgactg caccgtactc gagaaactgt ctgacaaaac tatcattctc
     9661 ggtacgctcg acctttccga tatgacggtc gagaaacccg agaccgtggc cgcgcgtatc
     9721 cgccgcgctt tgcctcatgt cgcggcggaa cggattatcg tcgcgcccga ttgcgggcta
     9781 aaatacctgc cgcgcgaggt tgcttacgga aagctgtgcg ccatggtcga aggcgcgaac
     9841 atcgtacgtg ccgaattgtc aaaataaaga tgccagccaa gctgtttcct acctctctcg
     9901 tcggttcgta tccgcagccg gattggctta tcgatcgcgc acgtctgtcc aagatggtgc
     9961 cgcgcgttcg aatggatgat ctctggttga tcggtacgaa agagctcgag gaaaagcagg
    10021 acgaggcgac gcttctcgcc attcgcgacc aggagcgcgc ggggctcgac atcatcactg
    10081 atggcgagca gcgccgcgaa agttattcaa accgctttgc aacggcgctc gagggcgttg
    10141 acaccgcaaa ccccggctcg acgctgaatc gcagcggcaa gcctattccg gtcccgcgcg
    10201 tgatcggcaa gatccgccgg aagtatcccg tgcagctgcg agacttgcag ttcctgcggg
    10261 caaatacgaa aaggcttgtg aagatgaccg tgcccggacc gttcacgatg tccaaacagg
    10321 cgcaaaatga attttacaaa tcggacgagg cgatggccct cgattacgcc gccgcggtta
    10381 acgatgaaat ccaggatctg ttcgcggcgg gcgcagatat cgtgcaaatc gacgagccgt
    10441 ggatgcagca acatccggac agagcgcgcg agtatggtct gaaggcactc gaccgcgcgc
    10501 ttgatggcgt caccggaact gtcgcggtgc atttgtgctt tggttatgcc gcggtcgtgc
    10561 acgataagcc gaccggctat tcatttctct ctgagctcga aggctcccgg gccggccaga
    10621 tctcgatcga agcagcgcaa ccgaagctcg atctcggcgt tctgaagacg ttgccgtcga
    10681 aaacgatcat tcttggcgtc atcgatcttt cggacatggg aatcgagacg cccgatacgg
    10741 tggcggcgcg cattcgcaat gcgcttgcac acgtgtccgc ggatcgcatt gtgattgcgc
    10801 ctgattgcgg gatgaagtat ctgccgcgcg aggtagcata cggcaaaatg caggccatgg
    10861 tgcgaggcgc gtcgatcgtg cggctcgagg aatccgacga ctagaccatc ggcggcttga
    10921 acttgccccc aatacccgca aaatgaggcc aataacaagg acaggacggc tccgttgccg
    10981 aggaaccgtg aaatcattct tagggaggat gcgatgaaaa atgtgattgc ggccggcacg
    11041 gccgtagcgg ccataacgct g
//
LOCUS       DATDHO010000652         4145 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_472912, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000652 DATDHO010000000
VERSION     DATDHO010000652.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4145
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_472912"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            171..1124
                     /locus_tag="VIY07_12535"
     CDS             171..1124
                     /locus_tag="VIY07_12535"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEY6382617.1"
                     /translation="MTIAPKPSFVLSRRHLLGIEGLSHQDISGLLDLAEEFVELNRQI
                     EKKRTSLRGRTQINLFFEVSTRTQASFELAGKRLGADVMNMSTSSSSMRKGETLIDTA
                     ITLNAMHPDIIVVRHHASGAVELLARKVDCSVINAGDGSHEHPTQALLDALTIRRNKG
                     HIEGLVIAICGDILHSRVARSNIILLNAMGARVRVVAPSTLLPPGIERFGVEVARDMR
                     EGLADADIVMMLRLQRERMNGSYVPSMSEYFHYYGLDEKKLAYAKPDALVMHPGPMNR
                     GVEIDSIVADGAQSLIREQVEMGVAVRMAVLEALSRNLPNA"
     gene            1175..2476
                     /locus_tag="VIY07_12540"
     CDS             1175..2476
                     /locus_tag="VIY07_12540"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEY6382618.1"
                     /translation="MLTDRRPILLANARIVDPSRDLDIVGDLLIAEGLIRETKKGIGA
                     AGVPEGTDVIDCRGKVVAPGLVDMRAFVGEPGEASRETLASASQAAAAGGVTTVICQP
                     DTSPAIDDPATVDFVLRRARDNAIVHVHPMAAITKRLEGKEMTEIGLLKAAGAVAFTD
                     GAKSVTNAQVMRRALTYAGDFDAMIVHHTEDPNLIGDGVMNEGEFAARLGLLGIPKAA
                     ETVMLERDVRLVALSGGRYHAASVTCADTLEVLRRAKDAGLDVTASASINHVTLNEND
                     IGPYRTFLKLAPPLRAEDDRKALVEAVASGLVDVIMSDHNPQDVETKRLPFAEAAPGA
                     IGLETMLTAGLRLVHGGEVDLMTLLRAMSTRPAELLGLPGGTLRSGAPADVIVVDTEL
                     PWVLDPNELKSKCKNTPFDEARLTGRVVRTIVFGRTVYEYV"
     gene            2473..3063
                     /gene="plsY"
                     /locus_tag="VIY07_12545"
     CDS             2473..3063
                     /gene="plsY"
                     /locus_tag="VIY07_12545"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEY6382619.1"
                     /translation="MTVLALVFGYLLGSIPFGLLLTRAVGGPDIRAIGSGNIGATNVL
                     RTGRKGLAAVTLLCDALKGTVAVLMAAHFGPGAALIAGLGAFLGHLFPVWLRFKGGKG
                     VATYIGVLLGLYWPAALAFCAIWLVVAAVFRFSSLAALIASAMTPLTLWLFGLPTVAA
                     VFTLLTLLLWIKHRENIARLLNGTEAKIGAKAESPG"
     gene            3130..4145
                     /gene="dprA"
                     /locus_tag="VIY07_12550"
                     /pseudo
     CDS             3130..4145
                     /gene="dprA"
                     /locus_tag="VIY07_12550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510754.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
BASE COUNT          756 a         1296 c         1284 g          809 t
ORIGIN      
        1 gaataagtgg gggaaccgcc atgccaacgt cgtgccgcat gcggtgaagt caccttccac
       61 aatcaggttg cggacaaacg agttcattaa ttatctgaaa gagttgccct gtggatcggg
      121 aggcaacgcc cttgccgggg cggcaagttc cgcctatagg tcttgcttta atgactatcg
      181 cgccgaaacc ttcttttgtc ctcagcaggc ggcatttgtt ggggatcgaa ggactttcgc
      241 atcaggacat ttccggactg ctcgacctcg ccgaagaatt cgtcgagctc aatcgccaga
      301 tcgagaaaaa gcgcacgtcg ctgcgcggcc ggacacagat caatctcttc tttgaagtct
      361 caacccggac gcaggcctca ttcgagttgg ccggcaagcg ccttggcgcc gacgtcatga
      421 acatgtcaac gagctcatcc tcgatgcgca agggcgagac actgatcgac acggcgatca
      481 cgctcaatgc catgcaccct gacatcatcg tcgtgcgcca tcacgcgtcc ggcgccgtcg
      541 aactgctggc ccgcaaggtg gactgttcgg tgatcaacgc gggcgacgga tcacatgagc
      601 atccgaccca ggctctgctc gacgcgctaa ccatccggcg aaacaagggt cacatcgagg
      661 gactggtgat tgccatctgc ggcgatatcc ttcattcgcg ggtcgcccgc tcgaacatca
      721 tcctgctcaa tgccatgggc gcgcgtgtgc gcgttgtcgc accctccact ttgctgcctc
      781 cgggcatcga acggttcggg gtagaggtcg cgcgagacat gcgcgaaggt ctcgccgacg
      841 ccgatatcgt catgatgctc agacttcaac gcgagcggat gaatggctcc tacgtaccgt
      901 ccatgtcgga atacttccat tattatggtc tcgacgagaa aaagctggcg tatgcgaagc
      961 cggacgcact ggtgatgcat cctggcccca tgaatcgcgg tgtcgagatc gactccattg
     1021 tcgccgatgg cgcgcagtcg ctgatccgcg agcaggttga gatgggcgtc gcggtccgca
     1081 tggcggtgct ggaagccttg tcgcggaatc tgccaaatgc gtaacgcgtt gtcattccgg
     1141 acggcgcaag gcggaatggc aggataagtt catgatgctc accgaccgcc gcccgatcct
     1201 gcttgccaat gcccgcatcg tcgatccgtc gcgcgatctc gatatcgtgg gcgatcttct
     1261 gatcgcggaa ggtctcattc gcgaaaccaa gaagggcatc ggcgccgccg gcgttcccga
     1321 aggcaccgat gtcatcgatt gccgcggcaa ggtggtggcg ccgggtctgg tcgacatgcg
     1381 cgccttcgtc ggcgaaccgg gggaagccag ccgcgagacg cttgcttccg ccagccaggc
     1441 cgcggcggcc ggcggcgtta cgaccgttat ctgtcagccc gatacgtcac cggcgatcga
     1501 tgacccggct accgttgact tcgtgctgcg ccgcgcgcgc gacaacgcca tcgtgcacgt
     1561 gcatccgatg gcggcgatca ccaagcggct cgaaggcaag gaaatgaccg aaatcggcct
     1621 gcttaaggcc gccggcgccg ttgccttcac agacggcgcc aagagcgtca ccaacgcgca
     1681 ggtgatgcgg cgcgcgctca cttatgccgg cgattttgac gccatgatcg tgcaccatac
     1741 cgaagatcca aacctgatcg gcgatggcgt gatgaatgaa ggcgagttcg ccgcgcggct
     1801 cggcctgctt ggcattccga aagccgccga gacggtcatg ctcgagcgcg atgtgcgcct
     1861 cgttgccctg tcaggcgggc gatatcatgc cgcttcggtc acttgcgccg atacgctcga
     1921 ggtgttgcgc cgcgccaaag acgccgggct cgacgtcact gcctccgcgt cgatcaatca
     1981 tgtgacgctc aacgaaaacg acatcgggcc atatcgtact tttctcaagc tggcgccacc
     2041 gttgcgcgcc gaggacgacc gcaaggcgct cgttgaagcg gtggcctcgg gcctcgtcga
     2101 cgtgatcatg tccgaccaca atccgcagga cgtcgagacg aaacggctgc ccttcgcgga
     2161 agccgcgccg ggagcgatcg gactggagac aatgctcacg gcgggcttgc gcctggtcca
     2221 cggcggcgag gtcgatttga tgacgctgtt gcgcgcaatg tcgacgcggc ctgcagagtt
     2281 gcttggcctt ccgggcggca ctctgaggag cggtgcgcct gccgacgtga tcgtggtcga
     2341 cactgaactg ccctgggttc ttgatccgaa cgaattgaag tccaagtgca agaatacacc
     2401 tttcgatgaa gcccgactga cgggccgcgt ggttcgcacc attgttttcg ggcgcaccgt
     2461 ctacgaatac gtatgaccgt actcgcgctt gttttcggct acctgctcgg ctcgatcccg
     2521 ttcgggcttt tgctcacacg cgccgtcggc ggtccggaca tccgggcgat cggatcgggc
     2581 aatatcggcg cgaccaatgt cttgcgcacg ggccgcaaag gcctggccgc agtcacgctt
     2641 ctatgtgacg ccctcaaggg caccgtcgcc gtgcttatgg cggcgcactt cggcccaggt
     2701 gcggcgctga tcgcgggcct tggggcgttt ctcggccatc tctttccggt ctggctaaga
     2761 tttaagggcg gaaaaggcgt tgcaacctac atcggtgtgc tgcttggcct ctattggccc
     2821 gcggcattgg cattttgcgc aatctggctc gtggtggcgg ccgtgtttcg cttttcatcg
     2881 ctggccgcgc tcatcgcaag tgcgatgacg cctttgacct tgtggttatt tggcctccca
     2941 accgtcgcgg cggtctttac gcttctcact ctattgctgt ggatcaagca ccgggaaaac
     3001 atcgcgcgcc tgctcaacgg caccgaagcc aaaatcggcg caaaggcaga aagcccgggc
     3061 taaacttata gttgtatcag ccaaaaaacg gttggagtgc tgtcctgcgt ggaagcgggg
     3121 tagcggacgt tgagtagtcc tggacagacc gaagatccgc gtctcgattg gctcaggctg
     3181 atccgcagcg aaaacatcgg cccgcgtacc tttcatgatc ttgtcagaca gtacggaggt
     3241 gtccacccgg cccttatggc ctgccggatc tcgcgcgccg cggcggcttg aagcgttccc
     3301 cgcggatttg ctcgcgcgag caggccgaag ccgaattgaa ggctgcgcaa gcggcgggtg
     3361 tcgaattcct cacgcttgac gagcccgact atcccgcgcg cctgcgaatg attgacgatc
     3421 cgccgccggt tcttgccgta cgcggcagga tcgatgcgct agcgcgcccg ctgatcggca
     3481 ttgtcggctc gcggaatgcg tcggcggcag ggatcaagtt tgcccaacgc attgcgcgcg
     3541 atctgggcga ggcgggcttt accgttgtgt ccggactcgc tcgcggcatc gacgccgccg
     3601 cacatcgcgc gagcctgggc accggcactg tggccgtgct cgccggcggc cacgaccgga
     3661 tctatccggc cgaacatgtc gcactgcttg aagagcttct ggcggagggc gccgcgatat
     3721 ctgaaatgcc attcacctgg gagccgcgcg cccacgactt cccgcgccgc aatcgcctca
     3781 tctcgggcct ttcgcttggc atcgtggtcg tcgaggcagc ccgccggtcc ggctcgctca
     3841 tcacggcgag actagcagcc gaacaaggac gcgaagtctt cgcggtgcca gggtcgccgt
     3901 tagatccgcg cagcgaaggt accaacggtc tgctcaagca aggcgcgacg ccggtgaccg
     3961 aagccgcgga tgtgatcgca gcaatcgaac ctattctcgg ccgagagccc aatattacat
     4021 tggcgcagga gccagcccag gggccgcccg gttctcccga tatcacaacc ggtgatgacg
     4081 agcgcagccg cctcatcgcg cttctcggtc ccgcgccaat atcgatcgac gatctggtac
     4141 ggctc
//
LOCUS       DATDHO010000653         2355 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_130425, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000653 DATDHO010000000
VERSION     DATDHO010000653.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2355
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130425"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..345
                     /locus_tag="VIY07_12555"
     CDS             <1..345
                     /locus_tag="VIY07_12555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HEY6382620.1"
                     /translation="RIGFAEVLDYDMVGLDRASAIQRFLADKANRIGRPLRLRVQLRS
                     FDAICRLVECNVGVGIVPETTVRRTERTMAIRAVRLTDSWAPRELTICVRDVESLPPY
                     ARQLVDHLTASA"
     gene            complement(363..1427)
                     /locus_tag="VIY07_12560"
     CDS             complement(363..1427)
                     /locus_tag="VIY07_12560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014889836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY6382621.1"
                     /translation="MTASSSTKTSPGNFFEDFKLGQAIQHATPRTVTVGDVAIYNALF
                     GSRFAVQSADTFAKAIGYPRSPIDDLLLFHVVFGKTVPDISLNAVANLGYADCRFLKS
                     VYPGATLRAASEIIGLKENSNRKTGIVYVRSRGFDESGDAVIDYVRWVMVRKRNEAAA
                     APAEKVPELPKSVSPAQLGPACPSIDTAAYDNILAGSVHRFGDYKVGEKIDHVDGVTV
                     EEAEHQIATRLYQNTARVHFNQFAESSGRFGRRLIYGGHAISLARALSFNGLGNAFHV
                     AAINGGRHVAPLFAGCTVFAWSEVLAIAELPGREDVGALQLRTIATKDRPCADFPLTA
                     GNDYDPAVILDLDYWVLMPR"
     gene            1645..2262
                     /locus_tag="VIY07_12565"
     CDS             1645..2262
                     /locus_tag="VIY07_12565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEY6382622.1"
                     /translation="MTAATIATTETRATIHPRWVRVCHWINALAILVMIGSGWQIYNA
                     SPLFDFVFPRQITLGNWLAGALLWHFAAMWVLVINGIVYVTLGIVTGRFRRKLFPIRP
                     AEVFADLKAALTFKLAHDDLSRYNAVQKLLYTGVILAGIVIVLSGLAIWKPIQLQELT
                     ALFGGYDAARYVHFFAMVAIVGFLVVHIALALIVPKSLRAMIIGR"
BASE COUNT          474 a          698 c          698 g          485 t
ORIGIN      
        1 cgcataggct ttgccgaagt gctggactac gacatggtcg gcctcgaccg cgccagtgcg
       61 atccagcggt tcctcgcaga caaggccaat cgcatcgggc gtccgcttcg attgcgggtg
      121 cagctgcgaa gtttcgacgc catctgtcgt ctggtcgaat gcaacgtcgg cgtcggcatt
      181 gtgcctgaga cgaccgtgcg gcgcaccgaa cgcaccatgg caatcagggc cgttcggctc
      241 accgattcgt gggcgccgcg cgagttgacc atctgcgtgc gcgacgtcga gtcgcttccg
      301 ccctatgcgc gccagcttgt cgatcacctg acggcaagcg cgtagatttt attgccatcg
      361 cttcaacgcg gcatcagcac ccaatagtcc agatcaagaa ttactgccgg gtcgtagtcg
      421 ttgccggcgg tcagcggaaa atcagcgcac ggacgatcct tggtcgcaat ggtgcgcagc
      481 tgaagggcgc cgacgtcctc gcggcctggc aactcggcaa tcgcgagcac ttccgaccat
      541 gcgaataccg tgcatcccgc gaacagcggc gccacgtgcc gcccgccgtt gatcgccgca
      601 acatgaaagg cattgcccag gccattgaag gacaacgcgc gcgcaagcga aatggcgtgc
      661 ccgccataga taagacgccg accgaatcgt ccgctgcttt cggcgaactg gttgaaatgg
      721 acgcgcgcgg tgttttgata aagacgcgtc gcgatctggt gttcggcttc ttcgacggtc
      781 acgccgtcaa cgtggtcgat tttttccccg accttgtagt cgccgaagcg atgcacgctc
      841 cccgcgagga tattgtcata ggccgcggta tcgatgcttg gacaagcggg gcctagctgc
      901 gcgggactca cgctcttggg aagttcaggc actttttcag ccggcgcagc tgccgcctca
      961 ttgcgcttgc gcaccatcac ccatcgtacg taatcgatca cggcatcgcc ggattcatcg
     1021 aagccacgcg agcgcacgta gacgatgccg gtcttcctgt tggaattctc tttcaacccg
     1081 atgatctcgg aggccgcacg cagtgtcgcg cccggataaa cggatttgag aaacctgcag
     1141 tcggcatagc cgagattggc gaccgcattg agcgagatgt cgggcacagt cttgccgaat
     1201 acgacgtgaa agagaagcag gtcatcgatc ggggaccgcg gatatccgat tgcttttgcg
     1261 aaggtgtcgg ccgattgcac ggcaaatcgc gatccaaaca aggcattgta gatcgcgacg
     1321 tcgccgacgg taaccgtgcg cggcgtggcg tgctggattg cctggccgag cttgaaatct
     1381 tcaaagaagt tgcccggact cgtttttgtg gaggatgacg cggtcacaaa ctcacctttt
     1441 cattgactgg agtccggccc gatcattttc acaaaaccgt gagccaaacg ccagctttcg
     1501 ccaacgctga actgatgagg atgtgttcgg gcgtcgtggt agaggagaga agcgataaac
     1561 aaataaaagt gggctaaaat gacgcgcatc cgcggttgcg gccgcgccgt aactcccagt
     1621 ggagccgaca gggaaaagac cgcaatgacc gccgctacaa tcgccacgac agagactcgc
     1681 gcgacaattc acccgcgctg ggtacgcgtc tgtcactgga tcaatgcctt ggcgatactc
     1741 gtgatgatcg ggtccggctg gcagatatac aacgcgtcgc ccttgtttga ctttgtcttc
     1801 ccgcggcaga tcacgctcgg caactggctg gcgggcgcgt tgctatggca tttcgcggcc
     1861 atgtgggtcc tggtgatcaa cggcattgtc tatgtcactc tcggcatcgt caccggacgc
     1921 ttccgccgca aacttttccc aattcgtccg gccgaggttt tcgcagacct taaagccgcg
     1981 ctgacgttca agctcgccca tgacgatcta tcgcgttaca acgccgtgca aaagctgctc
     2041 tacaccggcg tgatcctcgc cggcattgtc atcgtgctat cagggctggc gatctggaag
     2101 ccgatccagc ttcaggaact gacagccttg ttcggtggat acgacgcagc acgctacgtg
     2161 cacttcttcg cgatggttgc gatcgtcggg ttccttgtcg tgcatatcgc gctggcattg
     2221 atcgtgccca agagtctgcg tgcgatgatc atcggacgtt agggagacac acatgcgtca
     2281 acgcaagatc attcccggcg tcgatccgaa gctcctgatc agggacgccg cgaaattgat
     2341 gccggatgcg agccg
//
LOCUS       DATDHO010000654         5991 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_328434, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000654 DATDHO010000000
VERSION     DATDHO010000654.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5991
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328434"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(74..2383)
                     /locus_tag="VIY07_12570"
     CDS             complement(74..2383)
                     /locus_tag="VIY07_12570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY6382623.1"
                     /translation="MGDFAVGQGVSRFEDPRLVRGGGRYVDDIKLPGMAHAVVLRSPH
                     AHAKIKSIDVAAAKIAPGVLAVLTAADVKAAGYGDLPVPGGLKRRDGSPMYKPRYPIL
                     AEDRVRWVGDCVAFVVAETVTQAQDAVELIQVDYEELPAVTATAEAYKPGAPLVWDDC
                     PDNICFVELIGDRGAVEAAFSRAAHIVGHRLVINRVTAATMEPRGAVGDYNAADGRYT
                     IYTSMQRPHPTRTELAKVLKVAESKIRIITGDTGGSFGMKTPIFNETPLVLLASKRIG
                     RPVKWVSTRTEAFLSDAQARDNVTEAELALDKDGHFLALRVKTIAAIGAYLQQSMPAF
                     VLNAGTLAGVYRTPAIHVDITAVFSNTNPMRPYRGNGRPEAAYVIERMVDLAAAKMGI
                     DSAELRRRNYIPSAAMPFKTGLTFTYDSGEFEKNMDLAIELADRKSFGTRKAEARKRG
                     KLLGFGISNTIERAGAPSTEGAEVRFDRSGSLLLFSGSNSQGQGHETVFKQLVCDRLG
                     IDPHDAQYVQGDTDQVFYGEGTGGSRSATLAGSAFHLATEKVVTKARAIAAHMLKVEQ
                     SDLNFDEGVFSTNKTNRTLSIKEIAIASLDIPNLPKGLEPGLFSTAVYTAPVNNYPNG
                     CHICELEIDRETGKVDITRYSVVDDFGTVLNPMLLHGQVHGGIAQGVGQVLMENIHFD
                     DAGQLVTASFMDYAMPHAHDLCDMEVESNPVPTKTNPLGVKGAGEAGCVGALPAVTNA
                     LVDALSEFGVRHIEMPATPERIWRVMQPK"
     gene            complement(2442..3515)
                     /gene="hemB"
                     /locus_tag="VIY07_12575"
     CDS             complement(2442..3515)
                     /gene="hemB"
                     /locus_tag="VIY07_12575"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEY6382624.1"
                     /translation="MAIKFGRPLERKIGFVPVEADTNEIQRNPLDLAVRMRRNRRSEW
                     ARRMVREHVLATDDLIWPLFVMDGHNSRMPVPSMPGVERLSVDQVVREAERAAKLTIP
                     CIALFPYTDPKLRDETGSEALNPDNLVCRAIGAIKKEVPSIGILCDVALDPFTSHGHD
                     GLLRDGVILNDETVAVLTKQALVQAEAGCDIIAPSDMMDGRVGAIRRALDGAGFTDVS
                     IMSYAAKYASAFYGPFRDAVGTAKTLTGDKRTYQMDPGNSDEALREVALDIAEGADMI
                     MVKPGLPYLDIVQRVKETFAMPTFAYQVSGEYAMIMAAAQNGWLDGERAMIESLTAFK
                     RAGCDGVLTYFALRAAEKLKEQQ"
     gene            complement(3593..5131)
                     /locus_tag="VIY07_12580"
     CDS             complement(3593..5131)
                     /locus_tag="VIY07_12580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6382625.1"
                     /translation="MASEDKKPSGPDLSAGIPAGDVAEGAMLAGHIGDDEVVVVRKGG
                     KLFAVSAHCTHYHGPLAEGVLVGETVRCPWHHAHFSLQTGEAIAAPALSSLTCWQVDE
                     RDGKIAVKSRKAPSPSKETGSPTERFFIVGGGAAGFAAAEMLRRRGFAGSVTMLSNDD
                     AAPVDRPNLSKDYLAGSAPEDWVPLRGDDWYTENKIDLRLKIQVTALDAKAKELALGD
                     GSRVKFDKLLLATGAEPVRLDIPGAGQKHVHTLRSLDDCRAIIAEAKHAKRAVVIGAS
                     FIGLETAASLRARDIDVHVVAPEKRPLERVFGPQLGDFIRALHEEHGVKFHLEDTVSA
                     IDGKRATLKSGTTLDADLVVVGVGVRPRLALAEKAGLAIDKGVSVNEYMQTSAPDIYA
                     AGDIARWPDAISGERIRVEHWVVAERQGQIAALNMMGMRTPFNSAPFFWSQHYDVPIN
                     YVGHAEKWDSIEIDGDVMKRDCVVRYKLGGRVLAVASIYRDKESLEAGVDMERLTGKA
                     AAPA"
     gene            5276..>5991
                     /locus_tag="VIY07_12585"
     CDS             5276..>5991
                     /locus_tag="VIY07_12585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6382626.1"
                     /translation="MNFELSEEQRAFQVTARTFARDEMMPHARDWDEGEVFPVKTMRK
                     AAKLGFGGIYVKEDVGGSALSRLDAALIFEELAQGCTSTAAYISIHNMAAWMIDAFGS
                     SDVRRKFLPKLCTMEHFASYCLTEPGAGSDAASLTTRARRDGQHYVLDGTKAFISGAG
                     VSDIYVVMVRTGEAGPRGISCIVVEKGTPGLSFGAQEKKLGWKTQPTAMVLFENCRVP
                     VSNRVGVEGQGFKIAMAGLDG"
BASE COUNT         1097 a         1858 c         1832 g         1204 t
ORIGIN      
        1 actataaaca gacacttaaa ccaattattg ccggaccctg cattccgccc gaaatacctg
       61 ggatcggaac gggctattta ggctgcatca cgcgccagat gcgctcgggc gtggccggca
      121 tctcgatgtg tcgtacgccg aattcggaca gcgcatcgac aagcgcattg gttacggccg
      181 gcagggcgcc cacgcagccg gcctcgccgg cgcccttgac gccaagcgga ttggtcttgg
      241 tcggcaccgg attgctttca acctccatgt cgcagaggtc gtgcgcatgc ggcatggcgt
      301 agtccatgaa tgaggccgtg acgagctgcc ccgcatcgtc gaaatggatg ttttccatca
      361 gcacctgccc gaccccctgt gcgatgccgc catggacctg gccgtgcagc agcattggat
      421 tgagcacggt gccgaaatcg tccaccacgc tgtatcgcgt gatgtcgacc ttgccggtct
      481 cgcgatcgat ttcaagttcg cagatatggc agccattcgg atagttattg accggcgcgg
      541 tgtagacggc ggtcgagaat aatccgggct ccaagccttt cggcagattg gggatgtcga
      601 gcgaggcgat ggcaatttcc tttatcgaca aggtgcggtt ggtcttgttg gtcgagaaga
      661 cgccctcatc aaaattaaga tcgctttgtt cgactttgag catgtgcgct gcgatcgcgc
      721 gcgccttggt cacgactttt tcagtcgcaa gatgaaatgc ggagccggca agggtggccg
      781 agcgtgaacc gccggtgcct tcaccgtaaa aaacctggtc ggtatcgccc tgaacatatt
      841 gcgcatcatg cggatcgatc cccagccggt cgcacacaag ttgtttgaat acggtttcat
      901 gtccctggcc ttgtgaattg gagccggaga acaggagcaa cgagccggac cggtcgaacc
      961 ggacttccgc accttccgtg ctcggggcgc cggcacgttc gatggtattc gatatcccaa
     1021 agccgagcag tttgccgcgc ttgcgcgctt ccgccttgcg cgtcccgaag cttttccggt
     1081 ccgcaagctc gattgcgaga tccatgttct tctcgaactc gccgctgtcg taagtgaagg
     1141 tgaggccggt cttgaatggc atggcggcgg acgggatgta atttcgtctg cgcagctcgg
     1201 ccgaatcaat tcccatcttg gcggcggcca ggtcgaccat acgctcgatc acataggctg
     1261 cctccggacg gccattgccg cgataaggcc gcatcgggtt tgtgttggaa aacacagcag
     1321 tgatgtcgac gtggatggct ggtgtccgat agacgccggc gagcgtgccg gcattgagca
     1381 cgaacgcggg catcgactgc tgcagataag cgccgattgc ggcaatcgtc tttacgcgca
     1441 gcgcgaggaa atggccgtcc ttgtcgagcg caagctcggc ttccgtgacg ttatcgcgcg
     1501 cctgggcgtc gctcaggaac gcttcggttc gcgtgctgac ccatttcaca ggccggccga
     1561 tgcgctttga tgcgagcagc accagcgggg tttcgttgaa gatcggcgtc ttcatgccga
     1621 agctgccgcc ggtatcgccg gttatgatgc gtatcttgct ttccgccacc ttgagcacct
     1681 tggcgagttc ggtacgcgtc ggatgcggac gctgcatgga cgtgtagatc gtgtagcggc
     1741 cgtcggccgc attgtaatcg ccgaccgcgc cacgcggctc catcgtggcg gctgtaacac
     1801 ggttgatcac aaggcgatga ccaacgatgt gggctgcgcg ggagaaggcg gcctcaaccg
     1861 cacccctgtc gccgatcaat tcgacgaagc aaatattgtc ggggcaatcg tcccatacga
     1921 gcggcgcgcc gggcttgtaa gcttcagcag tcgcggtcac agccggcaat tcctcgtaat
     1981 cgacctggat gagctcgact gcgtcctgcg cctgcgtgac cgtctcggcg acgacaaaag
     2041 cgacgcagtc gccgacccaa cggacgcggt cttccgcgag gatcggatag cgcggcttgt
     2101 acatcggcga gccgtcgcgg cgcttgaggc caccgggcac cggcaaatcg ccataaccgg
     2161 ctgccttgac gtcggctgcc gtcagcactg ccagcacacc tggcgcgatt ttggcggccg
     2221 caacatcgat cgatttgatc ttcgcgtgcg cgtgcggaga gcgaagcacc acggcgtgtg
     2281 ccatgcctgg cagcttgatg tcgtcgacat agcgcccgcc gccgcgcacc agccgcggat
     2341 cctcgaagcg cgacacgcct tgaccgacgg cgaaatcacc catttgaaat tccgatttta
     2401 gtgcgcgcct ggcagcaggc caggtttggg agggacatac gctattgctg ttctttcaat
     2461 ttctctgccg cgcgcaaagc gaaataggtg aggacgccat cgcagccggc gcgcttgaag
     2521 gcggtgaggc tttcaatcat ggcgcgctcg ccatccagcc agccgttttg agcggctgcc
     2581 atgatcatcg cgtattctcc cgacacctga tacgcgaagg tcggcatcgc aaatgtctcc
     2641 ttcacgcgct gcacgatgtc gagatagggc aggccgggct tgaccatgat catgtccgcg
     2701 ccttccgcga tgtcgagcgc aacctcgcgc aacgcctcgt cggaattgcc agggtccatc
     2761 tgataggtac gcttatcgcc ggtgagggtc ttcgccgttc cgacggcatc gcggaacgga
     2821 ccgtagaagg ctgatgcgta tttcgccgcg taggacataa tcgatacgtc ggtaaaaccg
     2881 gcgccatcga gcgccctgcg aatagcgccg acccttccat ccatcatgtc ggagggcgca
     2941 atgatgtcgc agcccgcttc cgcctgcacc agcgcctgct tggtcagcac cgccacggtt
     3001 tcgtcgttga ggatcacgcc gtcccgcaac aggccatcgt gtccgtggct ggtaaacgga
     3061 tcgagcgcga catcgcacag aatgccaatc gacggcactt ctttcttgat ggcaccaatg
     3121 gcccggcaga cgagattatc cggattaagc gcctcgcttc cggtctcgtc gcgcagcttc
     3181 gggtcggtgt aggggaaaag cgcaatgcac ggaatggtca gcttggcggc acgttcggct
     3241 tcgcgcacaa cctgatcgac cgaaagccgc tccacgcccg gcatcgaggg cacgggcatg
     3301 cgggagttgt ggccatccat cacgaacaac ggccagatca gatcgtcggt ggcaagcaca
     3361 tgctcgcgca ccattcggcg cgcccactcg ctgcgccggt tgcggcgcat gcgcaccgcc
     3421 agatcgagcg ggttgcgctg gatctcgttg gtatctgcct caaccggcac gaaaccgatt
     3481 tttcgctcta ggggtcgacc gaatttgatg gccatgagag ctctccgggg tttcttttac
     3541 ccggttcaca aaaagcccgc tacccgctcg cgcgcggcca gccggcggtt aactaagcag
     3601 gcgctgcggc ttttccggtc agcctttcca tgtcaacgcc cgcctcgaga ctttccttgt
     3661 cacgatagat ggaagcaacg gccagcaccc ggccgcccag cttgtagcgc acgacgcaat
     3721 cgcgtttcat gacatcgccg tcgatctcaa tcgagtccca cttttcggcg tgcccgacat
     3781 agttgatagg cacgtcataa tgctggctcc agaaaaacgg agctgaattg aatggcgtcc
     3841 gcatgcccat catattgagt gccgcgattt gtccctgccg ctccgcgact acccagtgct
     3901 cgacgcggat gcgctcgcct gaaatcgcat ccggccagcg agcgatgtcg ccggcggcat
     3961 agatgtctgg cgcgctcgtc tgcatgtatt cgttaacgct cacgcccttg tcgatagcaa
     4021 gtccggcttt ttcggccagc gcaaggcggg gccgcacgcc gacaccgacg acgaccagat
     4081 cggcatcaag tgtggtgccg ctcttcagcg tggcccgttt gccgtcaatt gcgctgacag
     4141 tgtcttcgag atggaacttg acgccgtgct cctcgtgcag cgcgcggatg aagtcgccga
     4201 gttgggggcc gaacacgcgt tcgaggggcc gtttctccgg tgcaaccacg tgcacgtcga
     4261 tgtcgcgcgc ccgcagggag gccgccgtct cgagtccgat aaagcttgca ccaatgacga
     4321 ccgcgcgctt tgcgtgcttt gcttcggcga taatggcgcg gcaatcgtcg agcgaccgca
     4381 acgtatgcac gtgcttttga ccggcgcccg gaatatcgag cctgaccggc tcagcacctg
     4441 tcgccagcag cagcttgtcg aacttgaccc tgctgccatc gcccagtgca agctcttttg
     4501 cctttgcgtc gagcgcggtg acctggatct tcagcctcag atcgatcttg ttctcggtat
     4561 accaatcgtc gccgcgcagc ggcacccagt cctccggcgc actcccggcc agataatctt
     4621 tcgacaggtt gggacggtcg accggcgcgg catcgtcatt gctgagcatc gtaacgctgc
     4681 cggcaaagcc gcgccgccgc agcatttctg cggcggcgaa accggcggcg ccgccgccga
     4741 cgataaaaaa tcgttcggtg ggagaccccg tttcctttga cggtgagggc gccttcctgc
     4801 ttttcaccgc gattttgccg tcgcgctcgt caacctgcca gcacgtgagc gagcttagcg
     4861 ccggcgccgc tatagcttcg ccggtctgca ggctgaaatg cgcgtgatgc caaggacagc
     4921 gcaccgtctc gccgacaagc acgccctcgg ctagcggccc gtgataatgg gtgcaatgag
     4981 cggaaactgc gaatagcttg ccgcccttgc gcaccacgac cacttcgtca tcgccgatgt
     5041 gaccggctag catcgcgccc tcggcaacat cgccggccgg gatgcctgcg gagaggtcgg
     5101 gtccgctcgg cttcttgtcc tcgcttgcca tgctgccgtc ctccattgct atctgcccga
     5161 ctagatgcgc caacggccgg aaaattccgc ttctatgata gatgcctcat attgcacccg
     5221 gttgccgcga tcagcccttg cttgctaagc cgcgtggagc gaggccggac ccaccatgaa
     5281 tttcgaactc tccgaggaac aacgcgcatt tcaggttacc gcccgcacgt ttgcccgtga
     5341 cgaaatgatg ccgcatgcgc gcgactggga cgagggcgaa gtgttcccgg tcaaaaccat
     5401 gcgaaaggcg gcaaagctgg gctttggcgg catttacgtc aaggaggatg tcggcggctc
     5461 ggcgctcagc cggctcgatg ctgcgctgat cttcgaggag ctggcgcagg gctgcacgtc
     5521 gacggcggcc tatatttcga tccacaacat ggccgcctgg atgatcgatg ccttcggcag
     5581 ttccgatgtc cgcaggaaat tcttgccgaa gctttgcacg atggagcact tcgcaagcta
     5641 ttgcctcacc gagccgggtg cgggctccga cgcggccagc ttgaccaccc gggcgcggcg
     5701 cgacgggcag cactacgtgc tggacggcac caaggcattc atctccggcg cgggcgtttc
     5761 ggacatctac gtggtgatgg tccgtacggg cgaagccggc ccgcgcggca tttcatgcat
     5821 cgtggtcgaa aagggcacgc cgggcctgtc gtttggtgcg caggaaaaga agctcggctg
     5881 gaaaacacag ccgaccgcga tggttctgtt cgagaactgc cgcgtgccgg tttcgaaccg
     5941 cgtcggcgtc gaggggcagg gtttcaagat cgcgatggcg ggacttgatg g
//
LOCUS       DATDHO010000655         2695 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_472971, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000655 DATDHO010000000
VERSION     DATDHO010000655.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2695)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2695)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2695
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_472971"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..420)
                     /locus_tag="VIY07_12590"
     CDS             complement(<1..420)
                     /locus_tag="VIY07_12590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020096245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY6382627.1"
                     /translation="MTTVATSWCGQSVERVEDGPLLTGRGRFIDDLGVRPGTLHAAIL
                     RSPHPHAKIRAINATAARTASGVAAVVTGAEVTAVSGSLVVGVKAPIECWPIAVERVR
                     YVGEPVAVVLAGNRYLAEDALELIEVEYEPHPAIIDPL"
     gene            complement(554..1729)
                     /locus_tag="VIY07_12595"
     CDS             complement(554..1729)
                     /locus_tag="VIY07_12595"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382628.1"
                     /translation="MTSKILLTTAAVAAAIVISLPLSNAQTAKLEGRNVKIGCLVPLT
                     GKGAEWGQGAKPSMEIAVEEINAKGGIGGLPIQLICYDDQTLESEALQQMSRLVDRDK
                     VLAVVGPCFSGPFETIAPQLDDRFKTPIDSYCSAKPGLSAMSKWAFRNTLTSDKQLKP
                     VVDAWLKEYKIKKVVIIYDAEDAVSKGEGAAVLPKLFKDHGVEILDSLTYRTKDTDYS
                     AQVTKAKSLGAEGIALGACYQNAAAIAKEMQKQGLNVPIIGGACAGAPGYIEIAGKAA
                     EGTYMSTAAWLDDPRPEVQAYVKKIKPKLNGALPPYSGPRSYDIVYSFKYCFEKAGIT
                     NKPADLDSDRDKIRQCLGTLKDFPGVAGPITMDEVRDGTGITAILKVVNGKYINIAK"
     gene            complement(1863..2573)
                     /locus_tag="VIY07_12600"
     CDS             complement(1863..2573)
                     /locus_tag="VIY07_12600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382629.1"
                     /translation="MLTIKGLRSGYGKLEVLHDIDIDILQGQIVSLIGANGAGKTTLL
                     KTISGLLRPTRGSIEFEGESIVRRPPHTIVELGISHVPEGRAILKRMTVIDNLRMGAY
                     VRRDSTIASDIDNVFERFPALSERRLQMAGTLSGGEQQMLAIGRALVARPRLLLLDEP
                     SLGLAPKIVTRIFLTLRELKNEGKTILLVEQNARQALQVADHGYVMERGRIVIKGSGQ
                     ELLNMPDVQRTYLGQSAA"
     gene            complement(2576..>2695)
                     /locus_tag="VIY07_12605"
     CDS             complement(2576..>2695)
                     /locus_tag="VIY07_12605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382630.1"
                     /translation="ISDQITVLNFGTKIAEGDPNQIQSDPAVVEAYLGEDVQL"
BASE COUNT          515 a          781 c          756 g          643 t
ORIGIN      
        1 gaggggatcg atgatggccg ggtgcggctc gtactcgacc tcgatgagct ccaaagcgtc
       61 ttcggcgagg taccggttgc ccgccagcac gactgcgacc ggctcgccga cataacggac
      121 gcgctcgacg gcgatcggcc agcattcgat cggcgccttc acgcccacga cgaggctgcc
      181 tgacaccgcg gtgacctcgg cgcccgtgac gacggcggcg acgcccgatg ccgtgcgtgc
      241 cgccgtggca ttgattgcgc ggattttcgc gtgggggtgg ggcgagcgca ggattgcggc
      301 gtgcagcgtt ccgggccgca cgccgaggtc gtcgatgaaa cggccgcgcc cggtgagcag
      361 cgggccgtct tcgacacgct caaccgactg gccgcaccag cttgtcgcta ccgtcgtcat
      421 cctcgaacgc atccccgcag atattgctgc gtaatgggta atgcgtgcaa gccaccgcct
      481 cacgcggccg aaagagtgaa gacggcgcca caagcggggc gccgtcttga cttgttaccg
      541 cactacgcac cgctcacttg gcgatgttga tatactttcc gttgacaacc tttaggatcg
      601 cggtgatgcc ggtcccgtcg cgcacctcat ccatggtgat cggcccggcg acccctggga
      661 aatccttgag cgtgccgagg cactgacgaa tcttgtcgcg gtcgctgtcg agatcggctg
      721 gcttgttggt tatacccgcc ttttcgaagc agtatttgaa cgagtacacg atgtcgtagg
      781 agcgcgggcc actatagggc ggcagcgcac cgttgagttt cggcttgatc ttcttaacgt
      841 acgcttggac ttctgggcgc ggatcgtcga gccacgcagc agtcgacatg tatgtccctt
      901 cagccgcttt gccggctatt tcgatgtatc caggtgcgcc ggcgcaggcg ccaccgatga
      961 tcggcacgtt gagaccctgc ttctgcattt ctttcgcgat tgcagccgcg ttctgatagc
     1021 aggcgcccag cgcgatacct tcggcgccaa gagatttggc cttagtcact tgcgccgaat
     1081 agtcagtgtc cttggtgcgg taagtgaggc tgtcaaggat ctctaccccg tgatccttaa
     1141 acagtttggg caataccgcc gcgccctcgc ccttcgaaac tgcatcttcc gcgtcataaa
     1201 tgatcacgac tttcttgatt ttgtattctt tgagccatgc atcgaccact ggcttgagct
     1261 gcttgtcact ggtgagggtg ttgcgaaacg cccacttgct catcgccgaa aggcccggct
     1321 tagccgagca ataagaatca atcggagttt tgaatcggtc gtcgagttgc ggtgcaatgg
     1381 tctcgaatgg cccactgaag caaggtccga ccacggccag taccttgtcg cgatccacga
     1441 gccggctcat ctgctggagt gcttcagatt ccaacgtctg atcatcgtag caaattaatt
     1501 gtatcggcag gcctccgatt ccgcctttgg cattgatttc ctcgaccgcg atttccatcg
     1561 agggcttggc accctggccc cattccgcgc ccttgccggt taaaggcact aagcaaccaa
     1621 tcttgacatt gcggccctct agtttcgctg tttgcgcgtt tgaaaggggc aaactgatga
     1681 cgattgcggc agcgacagct gccgtcgtaa gtaaaatttt agacgtcatt ggcatgatcc
     1741 tcccattgtt accaatcgcc ttttcagatc caattttggg cgcaccttcg tttgcttttt
     1801 cgcttcccac atattgtact cccctttgag ccttgggaag ttatcggtta atttcgtgcg
     1861 gcttaagcgg cgctttgtcc caggtaagtt ctttgcacgt caggcatatt caaaagctct
     1921 tgtcccgagc ctttaatgac gatgcgtcct cgctccatga cataaccgtg gtcggcaact
     1981 tgaagcgcct ggcgtgcgtt ttgctcgacc agaagaatcg ttttgccctc gttcttgagc
     2041 tcgcggagtg tgagaaaaat acgggtaact attttgggcg ctaaaccgag cgaaggctca
     2101 tcgagcagca gaagtcgcgg tcgtgcgacg agcgcgcggc cgattgccag catctgttgt
     2161 tcgccgccgc ttaacgtgcc tgccatctgc aggcgccgtt ccgacaacgc agggaagcgt
     2221 tcgaacacat tgtcgatatc gcttgcgatt gtagaatctc tgcgcacata agcgcccata
     2281 cgtaagttat cgatgaccgt catgcgtttg aggattgcac gcccctccgg cacatgacta
     2341 attccaagtt ctacaatcgt gtgaggcggg cgtcgcacga tgctctcgcc ttcgaactcg
     2401 atgctgcctc tggtcggcct cagtaagccg gaaatagtct taagcaacgt agttttgcca
     2461 gcaccgttgg cgccaatgag cgagacgatt tgcccttgaa gaatgtcaat gtcgatatcg
     2521 tgcaacacct cgagcttgcc gtatcccgaa cgcaatcctt tgatggtgag cattgtcata
     2581 gctggacgtc ctcaccgaga taggcctcaa caaccgctgg atcgctttgg atttgatttg
     2641 gatcgccttc ggcaatcttg gtgccgaaat tcagcacggt aatttggtcc gagat
//
LOCUS       DATDHO010000656         1721 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_328517, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000656 DATDHO010000000
VERSION     DATDHO010000656.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1721
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328517"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(205..645)
                     /locus_tag="VIY07_12610"
     CDS             complement(205..645)
                     /locus_tag="VIY07_12610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382631.1"
                     /translation="MLDKQAEKKDKSQWPADIAAEFERESTKPNPCVGTTLLSENERT
                     RVWIIRLAPGERIGFHRHVLDYFWTSVSGGRGRQHVHDGTTVEYTYQPGETRHETYGK
                     GEFKVHDLENLGDREMVFMTVEFKDSANKPLTLPPGVTPQSAAA"
     gene            730..>1721
                     /locus_tag="VIY07_12615"
     CDS             730..>1721
                     /locus_tag="VIY07_12615"
                     /inference="COORDINATES: protein motif:HMM:NF005566.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY6382632.1"
                     /translation="MAGAHGKRALIIGGSMSGLLSGLLLRRAGWNVDIYERVDSELSG
                     RGAGIVAQRELIERLRGLGLATQDLGVQITTRKILDAQGRLTHEFECPQVLTAWERVY
                     RLLRDAFPAAHYHRGRGLAKFTQNSESVEAHFSDGEIINSDLLVGADGIRSTVRQQLL
                     PDVAPRYAGYSAWRALIAEKAFPPDVHRELFGYMTFSLPRGEQFLGYPVAGPDNDLRP
                     GHRRYNVVWYRPADESTKLQWLLTDERGVTHAISIPPPLIRREAIAEMRADAEELIAP
                     QFRQIVRLIEEPILQPIYDLESPRMASGRVAIVGDAAFVARPHVAAGVSKAADDA"
BASE COUNT          331 a          505 c          530 g          355 t
ORIGIN      
        1 cgatcgcgtt gatgaacagt tcgaacgtaa aatccattcc cccaagcgtc ccttcgttat
       61 tattcccgct cggcgggctc tacgcgccag tgtgcaggaa ggctggtggc ttgactagcc
      121 tgtcgagctt gcaaagaaac atgaaatccg cggcagaatg aaacgcccgc tgtgggggcg
      181 ggcgtttcaa aaataatcgg tgaatcaagc agcagccgat tggggcgtta caccgggcgg
      241 cagcgtcaac ggcttgttgg cgctatcctt gaactcgacc gtcataaaga ccatttcgcg
      301 atcgccgaga ttttccaggt cgtggacctt aaactcgccc ttgccgtagg tttcgtgccg
      361 ggtctcgccc ggctgatatg tatattcgac cgtcgtgcca tcatgcacat gctgccggcc
      421 ccggccgccg gaaactgagg tccagaaata gtccagcacg tggcggtgga agccgatgcg
      481 ctcgcccggc gccagacgga tgatccatac gcgcgtgcgc tcgttctccg acagcagcgt
      541 ggtgcccacg caagggttcg gtttcgtgct ctcgcgctcg aattcggcgg cgatgtctgc
      601 cggccattgc gacttgtcct ttttctcggc ctgcttgtcg agcatggtca aagccatggg
      661 aattcctcca aagctgctgg ctgtcatata taggataaac gggtaaacga aaagatcgag
      721 gctgatcaat tggccggggc tcacgggaag cgcgcactga tcatcggcgg ttcgatgagc
      781 ggattgctca gcgggcttct gctgcgccgc gccggctgga acgttgatat ctacgagcgc
      841 gtggacagcg agctgtccgg ccgcggcgcc gggatagtcg cccagcgtga attgatcgaa
      901 cggctgcgtg ggctcggcct cgctacacaa gaccttggcg ttcagatcac gacccgcaaa
      961 attctcgatg cgcaaggccg tttgacgcat gaattcgaat gcccgcaggt gctgactgcg
     1021 tgggagcggg tttaccggct gctgcgcgat gcgtttccgg ccgcgcacta tcaccgcgga
     1081 cgcgggctcg caaaattcac gcagaattcg gagtcagttg aggcacattt ttccgatggc
     1141 gaaatcatta attcggatct gctcgtcgga gccgacggca tccgatcgac cgtacgtcaa
     1201 cagctactgc ccgacgtagc accacgctat gccggctact ccgcctggcg tgcgctgatc
     1261 gccgaaaaag cttttccgcc ggacgtgcat cgcgagctgt tcgggtacat gactttcagc
     1321 ctgcccaggg gcgagcagtt tctgggatat ccggtcgcag gacctgacaa tgatttgcgt
     1381 cccggccatc gccgctacaa cgtggtctgg tataggccag ccgacgagtc gaccaagttg
     1441 caatggctgc tcaccgacga gcgcggtgtc acgcacgcga tatcgattcc cccgcccttg
     1501 atccgtcggg aggcaatcgc cgaaatgcgc gccgatgcag aagaattgat agcgccgcaa
     1561 ttccggcaaa tcgtgcggct gatcgaggaa ccgatcctgc agccgatcta tgacctggaa
     1621 tcgccgcgca tggcttctgg ccgggttgcg atcgtgggcg atgcagcttt cgtggcgagg
     1681 ccgcatgtgg cggccggcgt ttcgaaggcc gcggacgatg c
//
LOCUS       DATDHO010000657         6263 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_30464, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000657 DATDHO010000000
VERSION     DATDHO010000657.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6263)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6263)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6263
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30464"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..139
                     /locus_tag="VIY07_12620"
     CDS             <1..139
                     /locus_tag="VIY07_12620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013635837.1"
                     /note="FabF; beta-ketoacyl-ACP synthase II, KASII;
                     catalyzes a condensation reaction in fatty acid
                     biosynthesis: addition of an acyl acceptor of two carbons
                     from malonyl-ACP; required for the elongation of
                     short-chain unsaturated acyl-ACP; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEY6382633.1"
                     /translation="DNPSIDTPIDLVPHQARKREVDTALSNSFGFGGTNASLIFRGYA
                     A"
     gene            273..1421
                     /gene="mltG"
                     /locus_tag="VIY07_12625"
     CDS             273..1421
                     /gene="mltG"
                     /locus_tag="VIY07_12625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEY6382634.1"
                     /translation="MNANRPPIGGNGSSAAKPSLPRSPRAALEPERIPAPKRHSRRVR
                     HPIVVIGNAIFTALIVVSIAVGAALFIGRQRFEAPGPLPEDKLVNIPRGLGIRDIADL
                     LQREGVIDQPYVFMGGVIVLKARGELKYGEYQFGKQASVAEVVDTITEGKVIQHGLTV
                     PEGLTSEQIVARLLENDVLTGQIREIPREGTLLPETYKFTRGMTREQIVQRMQQAHRR
                     VLQEVWERRMPDLPIKTPEQLVTLASIVEKETGRPEERTRVAAVFVNRLKGRMRLQSD
                     PTIIYGLTGGKGSLGRPILRSEIDQPTPYNTYVVDGLPPGPIANPGRASLEAAANPAR
                     TKELYFVADGTGGHVFSDNYAEHQKNVARLRSIEHGAPSPAAGAPIRQ"
     gene            1490..2377
                     /locus_tag="VIY07_12630"
     CDS             1490..2377
                     /locus_tag="VIY07_12630"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HEY6382635.1"
                     /translation="MALSSMTGFARGHGIAGSYAWTWEIKSVNAKGLDLRFRLPTGWD
                     AVEVPARARAAEKLARGTIYANLSVERKGVQPTAKINEPVLGAVLSTLRSLSGKVDAA
                     PATLDGILSLKGVIEVTEEDEREEDHRAAEAAIVAAFDHALSELVAMRRGEGATLGRL
                     LRTRLDEIGALAARAEKAPGRKPEAIRARLLEQVTALLSASERFDTDRLHQEAILLAA
                     KADIREELDRLSSHIGQAKKLLADGGPIGRKLDFLAQELHRESNTLTAKANDVELTNI
                     GLELKSVIEQFREQVQNLE"
     gene            2383..3039
                     /gene="gmk"
                     /locus_tag="VIY07_12635"
     CDS             2383..3039
                     /gene="gmk"
                     /locus_tag="VIY07_12635"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEY6382636.1"
                     /translation="MAHRSKNETAVARRGLMLVLSSPSGAGKTTLSRRLLEYDPNVEL
                     SISVTTRKRRPSEMEGRDYRFITRREFDNLVEKGELLEWAEVFDNYYGTPKKPVLEAL
                     AAGRDVLFDIDWQGTKQLKQVAREDIASVFVLPPSVLELERRLRTRAQDDYETIHRRM
                     AKAANEMSHWNEYDYVVINHDLDQAFAEVASILAAERLKRERQTGVSDFVRGLQAKLS
                     "
     gene            complement(3036..4088)
                     /locus_tag="VIY07_12640"
     CDS             complement(3036..4088)
                     /locus_tag="VIY07_12640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY6382637.1"
                     /translation="MMKMLRESLTAYGAPLCETVADLPTPQGSEVLVRVERCGVCHSD
                     LHMQDGYFLLGGEKKLDVRAGRTLPFTLGHEIAGRIEAAGPDAAVESGRPVAVYPWIG
                     CGQCAACKVGDENICSSPRHLGITVDGGFASHVLAPDPRYLLDYAPLSPGYAGALMCS
                     GLTAYAALKRLADRAARAPLLLVGLGGVGLMGLALVRAMYGAAPLVADIDAKKRAAAL
                     AAGAAEAFDPSDPDARKTVLKATGGVYGVCDFAGSDASLNFATGVPAKGGKVVVTGLI
                     GGGYATAVAMFPLKAMTIEGTTTGTLAEARELVDLVRSKNIPPPPIADRPLAQASSTL
                     DDLRAGRIVGRIVLAC"
     gene            complement(4097..4954)
                     /gene="rsmA"
                     /locus_tag="VIY07_12645"
     CDS             complement(4097..4954)
                     /gene="rsmA"
                     /locus_tag="VIY07_12645"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEY6382638.1"
                     /translation="MAQLDDLPPLREVIRRHGLTPKKSLGQNFLFDLNLTARIARAAE
                     PLENITVVEVGPGPGGLTRALLALGARRVIAIERDQRAIAALEEIAARYPGRLEIVAG
                     DALSIDPHEHLGPERARVVANLPYNIATALLVGWLTVEPWPPWYDHLLLMFQREVAER
                     IVAAPGTKSYGRLSVLAGWRTEAKILFDVARSAFVPPPKVTSSIVRLTPRQEPLPCDA
                     LALQRVTEAAFGQRRKMLRQSLKTLGVDPVAILAEAAIDPTSRAEEIPVEGFVALANI
                     FSRQAKAQV"
     gene            complement(4970..6004)
                     /gene="pdxA"
                     /locus_tag="VIY07_12650"
     CDS             complement(4970..6004)
                     /gene="pdxA"
                     /locus_tag="VIY07_12650"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEY6382639.1"
                     /translation="MSEPAALPLALTLGEPAGIGPDLTIQVWHRRAELRLPAFYLIAD
                     PEFVARRARLLGLDIPVSVVTSAQAGGTFAHALPVVPLDILASAAPGKPDASSAPAAI
                     ASIRRAVADVLAGKAAAVVTNPVAKNVLYRSGFAEPGHTEFLARLVHEATGKPASPVM
                     MLWSPELAVVPVTIHLPFKEVVTQLSSELVVETGRIVARDLTARFGISHPRIVVAGLN
                     PHAGEQGALGGEDASIVAPAVKRLQAEGIDAIGPLPADTLFHERARAGYDVALCMYHD
                     QALIPIKTLAFDHAVNVTLGLPFVRTSPDHGTAFDIAGKGTADPTSLIAALTLAARLS
                     AAAPALVPAK"
     gene            complement(6001..>6263)
                     /locus_tag="VIY07_12655"
     CDS             complement(6001..>6263)
                     /locus_tag="VIY07_12655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY6382640.1"
                     /translation="TKNSADLTPQLRDLLGNVQVGRLTAPEATAQGLQMFAVCNKKES
                     TTESPLKREMREQIFVKRFESESKKYLDEIRKAAMIEYKNVK"
BASE COUNT         1279 a         1897 c         1938 g         1149 t
ORIGIN      
        1 cgacaaccct tccatcgaca cgccgattga cctcgtgccc catcaggccc gcaaacgcga
       61 ggtcgacacc gcgttatcga attcctttgg gttcggtggg accaacgctt cgctgatctt
      121 ccgcggctac gccgcctagg aggccacctc acagagcacc caagctttcg ccataatttt
      181 ttctaaggtc gcgaaagcga ttgaaatttt tgtgccgccg tggagggtat ggggtagggg
      241 acggtatcgg tgccgactcg ggagtggctc aggtgaacgc aaatcgaccg cccattggcg
      301 gaaatggctc atctgcagcc aagccgtcgt tgccccgaag cccgcgcgcc gccctcgagc
      361 ccgaaagaat acctgcaccc aagcgccact cgcgccgcgt acggcatccc attgtggtaa
      421 tcggcaacgc gatcttcaca gcgctgatcg tggtttcgat cgcagttggt gccgctttgt
      481 tcatcggcag gcagcgattc gaagcgcctg ggccgctgcc cgaggataaa ttggtcaata
      541 ttccgcgtgg tctgggcatt cgggatattg cggacctgtt gcagcgcgag ggcgtgatcg
      601 atcaaccata tgtgttcatg ggcggagtga ttgtgctcaa agcccgtggc gagcttaagt
      661 atggcgaata ccaattcggc aaacaggcaa gcgtcgccga ggttgtcgat acgatcactg
      721 aaggcaaggt aatccagcac ggcttgacgg ttccggaggg actgacctcc gaacagattg
      781 ttgcccgcct cctggaaaac gacgtcctta ccggacagat cagggaaata ccgcgcgagg
      841 gcacgctgct tccggaaacc tacaaattta cccgaggcat gacgcgcgag cagatcgtcc
      901 agcgcatgca gcaggcgcat cgacgcgtgc tgcaggaagt gtgggagcgc cggatgccgg
      961 atctcccgat caaaacgccg gagcagctgg tcacgcttgc ctcgatcgtg gagaaggaaa
     1021 ccggcagacc cgaggagcgc acacgggttg ccgccgtgtt tgtcaatcga ctgaaaggca
     1081 ggatgcggct tcagtccgac cccaccatca tctatggatt gacggggggc aaagggtcac
     1141 tcggtcgtcc cattctgaga agcgagatcg atcagccgac cccatacaat acttacgtcg
     1201 tcgatggcct gccgccggga ccgatcgcga atcccggccg cgcctcgctc gaggccgccg
     1261 cgaatccggc acgcaccaag gaactctatt tcgttgccga tgggaccggc ggccatgttt
     1321 tctcggacaa ttatgccgag catcagaaaa acgtcgcgcg cctacggagc attgagcatg
     1381 gagctccctc accggcggcc ggcgcaccca tcaggcagta ggcttgtgag ggcaacctca
     1441 cgcggctaag gtcgccgcgc ttcgcgcagg caacaacacg agatctccca tggctctgtc
     1501 gagcatgacc ggatttgctc gcggccacgg gatcgccggc tcctatgcct ggacctggga
     1561 gatcaaatcc gtcaatgcaa agggtctcga cttgcgcttc cgtcttccga cgggatggga
     1621 tgcggtcgag gtaccggctc gcgcccgcgc cgccgaaaag ctcgcacgcg gcacgatcta
     1681 cgccaacctt tccgttgagc gcaaaggcgt gcagccgacg gccaagatca atgagccggt
     1741 gctcggcgcc gttctttcga cgctcaggag cctgtccggg aaagtcgacg ccgctccagc
     1801 gactctggac ggcattcttt cgctcaaggg cgtgatcgaa gtcaccgagg aagatgaacg
     1861 ggaggaagac catcgcgcag ccgaagccgc catcgtcgcc gcattcgatc atgccctctc
     1921 cgagctggtt gcaatgcgac gcggagaggg cgccactctc ggaaggttgc tgcgcacaag
     1981 gcttgatgag atcggagcac tagccgcgcg cgcggaaaaa gcgccggggc gcaagccgga
     2041 agcgatcagg gcgcggctgc tcgaacaggt tacggcactt ctttcggcgt cggagcgttt
     2101 cgacaccgat cgcctgcacc aggaggcaat cctccttgcc gccaaagccg atatccgcga
     2161 agagctcgac aggctctcgt ctcatatagg gcaggcgaaa aaacttctcg cagatggcgg
     2221 cccgatcggc cgcaagctcg attttctcgc gcaggaactt catcgcgaat cgaatacgct
     2281 taccgccaag gccaacgatg tcgaactgac caatatcggt cttgagctca aaagcgtgat
     2341 cgagcaattc cgggaacagg tgcagaatct cgagtgatct gaatggcgca tcggtcgaaa
     2401 aacgagacag ccgtcgccag gcgcgggttg atgctcgtcc tctcatcgcc ctcgggggcc
     2461 ggcaagacaa cgctgtcgcg caggctgttg gaatatgatc ccaatgtaga gctatcaatc
     2521 tcggttacga cccgaaaaag acgcccgagc gaaatggagg ggcgcgacta ccgtttcatc
     2581 actcgtcggg agttcgacaa cctcgtcgag aaaggtgaat tgcttgaatg ggcggaagtt
     2641 ttcgacaact attacggcac gcctaaaaaa ccggtgttgg aagcgctcgc tgcgggtcgg
     2701 gatgtcttat ttgacatcga ctggcagggg accaagcaac tcaagcaagt ggcgcgcgaa
     2761 gacatagcaa gcgtattcgt tctaccaccc tcggtcttgg agctagagcg gcggttgcgc
     2821 acgcgggcac aggacgacta cgagacaatt catcgacgca tggcaaaagc tgccaatgaa
     2881 atgagtcact ggaacgaata cgactatgtc gtgatcaatc acgatcttga tcaggcgttc
     2941 gctgaagtcg cttccattct cgctgcggaa cgattgaaac gcgagcgtca aaccggggta
     3001 tctgacttcg ttcgtggctt gcaggcgaaa ctctcttagc aagccaacac gatccgcccc
     3061 acgatgcgtc ccgcgcgcag gtcatcgagc gtggatgagg cttgcgcgag cggccgatcg
     3121 gcgatcggag gcggagggat gtttttcgag cgcacgagat cgacaagctc gcgcgcctcg
     3181 gccagcgtgc cggtcgtggt accttcgatt gtcatggcct tgagcggaaa catggccact
     3241 gccgtcgcgt agcctccacc gatcaatccc gtgaccacga cctttcctcc cttggccggt
     3301 acaccggtgg caaaattcag cgaggcgtcg gagccggcaa aatcgcaaac gccgtagaca
     3361 ccgccggtgg ccttcaacac ggtctttcgg gcgtccggat cggagggatc gaaggcctcg
     3421 gccgctccgg ccgcgagcgc ggccgctctc ttttttgcgt cgatatcggc tacgagcggg
     3481 gcggccccgt acatcgcccg cacgagcgcg agccccatga gccccacgcc gccaagacca
     3541 accagtaaaa gcggcgcgcg tgccgcgcgg tcggcaagcc gcttcagcgc ggcgtaggcc
     3601 gtcagtccgg agcacatcag tgcgccggca taacccggcg acaaaggcgc atagtcaagc
     3661 aggtagcgcg ggtcgggtgc caggacgtgg ctggcgaagc cgccgtcaac ggttattccg
     3721 agatgacgcg gagagctgca gatattctcg tcaccaacct tgcatgctgc gcactgtccg
     3781 caaccgatcc agggataaac ggcaacgggc ctcccggatt ctactgccgc gtccggtccg
     3841 gcggcctcga tcctgccggc aatttcgtga ccaagagtga acggaagcgt gcgccctgcg
     3901 cgaacatcga gctttttttc tccaccaagc aaaaaataac catcctgcat gtgcaggtcg
     3961 gaatggcaga cgccgcaacg ttcaacccgg accagcacct cggagccctg tggcgtcggc
     4021 aagtccgcca ccgtttcgca gagcggcgct ccgtaggccg tcaaagattc tcggagcatt
     4081 ttcatcagtt gcgactttac acttgggctt tggcttgtcg ggaaaaaata tttgccaacg
     4141 cgacaaaacc ttcgaccgga atttcttcgg ctcgcgatgt tggatcgata gcggcttcgg
     4201 ccaggatcgc gactgggtcc acgcccaagg ttttcaggct ttgccgcagc atttttcggc
     4261 gctggccgaa agcggcctcg gtcacgcgct gcagcgcaag cgcgtcacag gggagcggtt
     4321 cctgtcgcgg cgtgaggcgc acgatcgagg atgtcacttt gggaggcggc acaaacgccg
     4381 agcgcgcgac atcgaacagg attttggcct cggtgcgcca ccctgccagc acggaaaggc
     4441 gcccatatga ttttgtgcct ggcgcggcga cgattcgctc ggccacctcg cgctggaaca
     4501 tcagcagcag gtgatcatac cagggcggcc agggctcgac ggtaagccag cccaccaaca
     4561 gtgcggtcgc tatattgtag ggcaggttcg ccacgacgcg agcccgttcg gggccgaggt
     4621 gctcgtgggg gtcaatactc agagcatcgc ctgcgacgat ttccagccgt ccgggatagc
     4681 gcgcggcgat ctcttcaagc gcggcgattg cgcgttgatc gcgttcgatg gcaatgacgc
     4741 ggcgcgcccc gagcgcgagc agcgcccgcg tcagtccccc cggaccgggt ccgacttcca
     4801 ccacggtaat gttctcaagc ggctcagccg cacgcgcaat gcgcgcggtc aagttgaggt
     4861 caaacagaaa attttgaccg agcgattttt tcggggtgag accatgtcgc cggatgacct
     4921 cgcgcagcgg cggaaggtca tcgagctgtg ccattgtcga tttgcggctc tattttgcag
     4981 gaacgagcgc gggggcggcc gccgacagac gcgccgcgag tgtgagtgcc gcgatcaggc
     5041 tggtcggatc agcggtgcct tttcctgcga tatcgaaggc ggtgccgtga tccggcgacg
     5101 tccgcacgaa gggaagacca agggtcacgt tcacagcgtg atcgaatgcg agtgtcttga
     5161 tcgggatcag tgcctggtcg tgatacatgc agagcgccac gtcataaccg gcgcgagctc
     5221 gctcatggaa caatgtatcg gctggcaaag ggccgatcgc atcgatgcct tctgcctgca
     5281 gccgtttcac ggccggcgcc acgattgacg catcctcgcc gcccaacgcg ccttgttcgc
     5341 cggcgtgcgg gttgagcccg gcgactacaa tgcgcggatg cgaaatacca aatcgagccg
     5401 tcaggtcgcg cgcgacgatg cggccggttt ccaccacgag ctccgacgag agttgcgtga
     5461 cgacctcttt gaacggcaaa tgaatggtca cgggcacgac agcgagctcc ggcgaccaca
     5521 gcatcatgac cggactggca ggcttgcccg ttgcttcgtg cacaagcctg gcaagaaatt
     5581 cggtatggcc gggctcggca aaaccggaac ggtagaggac gttcttggca accgggttgg
     5641 tgacgaccgc tgctgccttt cccgccagga cgtccgccac cgcacggcgg atcgaggcga
     5701 tcgccgcagg ggcgctcgat gcgtcaggtt tgccaggcgc ggcactggct aaaatatcga
     5761 gcgggacaac aggcagcgca tgcgcgaacg tccctccggc ttgcgccgac gtcaccacgc
     5821 tcacggggat atccaggccg agcagacggg cgcgccgcgc aacgaattcc ggatcggcga
     5881 tcagataaaa ggccggcaac ctgagttcgg cgcgccggtg ccacacttga atggtcaggt
     5941 ccgggccaat gccagccggc tcgccaagcg ttagagccaa tggcagggcg gcgggttcgc
     6001 tcatttgacg ttcttgtatt cgatcatcgc cgccttgcgt atttcgtcca gatatttttt
     6061 cgactcggat tcgaagcgct tgacgaatat ctgctcgcgc atctcacgct tgagcggcga
     6121 ttccgtcgtg ctttctttct tgttgcagac ggcgaacatc tgcaggccct gcgcggtcgc
     6181 ctcaggcgca gtaagacgcc cgacctgaac gttgccgagc aaatcccgca attgcggagt
     6241 aaggtcggct gaatttttgg tga
//
LOCUS       DATDHO010000658         2918 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_130606, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000658 DATDHO010000000
VERSION     DATDHO010000658.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130606"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(484..1716)
                     /locus_tag="VIY07_12660"
     CDS             complement(484..1716)
                     /locus_tag="VIY07_12660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEY6382641.1"
                     /translation="MSRPALEVADIFRDHGAAWRAANAGHVSLDQLKVMSAIERCRTA
                     ALGGHVLRCEKCSHTAISYNSCRNRHCPKCQGTAAKQWLAEREAGLLPVPYFHVVFSL
                     PARIADIAYQNKAVIYDLLLTISAETLITIAADPQRLGARIGILSVLHTWGSALTHHP
                     HVHMIVPGGGFSLDGKRWVCCRPRYLLPVPVLSSLFRRLVLEKLTAAHSAGKLQFFGK
                     HAKLADAKAFAAYLAPLRNSKWVVYCKRPFGGPEEVLRYLARYTHRVAISNRRLVARD
                     EKGVTFKWKDYRIEGPERYKLMTLPTHEFIRRFLMHVLPAGFHRIRYYGLLASGKRAE
                     NVARARRLLAPPLIPIDAIKAIGSAASKPQTAEPQPANHQCPCCGGHMIVIERFDRGC
                     QPKHQPSPIPASIRIDTS"
     gene            complement(1730..2668)
                     /locus_tag="VIY07_12665"
     CDS             complement(1730..2668)
                     /locus_tag="VIY07_12665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011875615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEY6382642.1"
                     /translation="MTTMAIPPLRQRMIEDMNARKLCAGTQRGHIRACKRFAAFLKRS
                     PDTATLEDIRRFQLHLADSGVSICTRNCIMTGLRFLFRVTLRRLDLAEEVYHIREPQK
                     LPLVMSVDEMRRLLAVAASLKTRVLLSLGYGCGLRASEIVRLKVKHIDRAQSIIRIEQ
                     SKGRKDRNVMLPDEMLGLLRQWWKARPSRHDAGIALQERWLFPSRKSAGRPITTRHLN
                     RLFHEAADAAGIKKGVTLHTLRHSFATHLLENDTNVRTIQALLGHTKLDTTARYAHVA
                     TGMISAVESPLDRLSRPKRKRSGKAENRCKQGQPPA"
BASE COUNT          515 a          859 c          999 g          545 t
ORIGIN      
        1 cgcgccgacg aggtgatcga gtagggcgct gtttgctgca ccgcgtaatg tcgcctcatg
       61 gcccgaaggc gaagtcggcg catgtccgct tgcatgtcgg ctaacgtgta ggttttcgga
      121 cgccggcggt gacggcctcg caacacgctg ggcggccggc gtccgaaaag cgccaaggca
      181 cgaaatcgcg tcgggaggta gtgcagttgc ggtgccgcag gcgccggtgc ggcaaacggc
      241 tatggggatt tggccgtgcg attggaggtg agttggctag gcgagatcat tgccgggctc
      301 gtttgggcct agacacggcg cggatcgggt ggatgtagac gcggggcgac gcttgcgcgc
      361 ggtgatttgt actgcggccg gcggcaatcg tctgaatgag cacgagctta ggcgaaccgg
      421 cggcgcgccc gctgaagtcg gagggcgata gcagtgttcg aactccgaag agtgcttcct
      481 gcttcatgac gtgtcgatcc tgatcgacgc cggaattggc gagggctggt gttttggctg
      541 acatccacgg tcgaaacgct cgatcacgat catgtgcccg ccacagcagg ggcattgatg
      601 gtttgctggt tgtggttctg cggtttgcgg cttgctggcg gcgctgccga tggctttgat
      661 tgcgtcgatg ggaatgagcg gtggcgcgag cagtcggcgg gctcgggcga cattctcggc
      721 acgtttaccg ctggcgagca ggccatagta gcggatgcgg tggaatcccg cgggtagcac
      781 atgcatcagg aaacggcgga tgaactcgtg ggtggggagc gtcatgagct tgtagcgctc
      841 gggaccttcg atcctgtagt ccttccactt gaaggtgacg cccttctcat cgcgcgcgac
      901 caggcggcgg ttcgagatgg cgacgcggtg agtgtagcgc gcgagatagc gcagcacttc
      961 ctcgggcccg ccgaaggggc gcttgcagta gaccacccac ttgctgttgc gcagtggtgc
     1021 cagataggcg gcgaaggctt tcgcatcggc gagcttggca tgcttgccga agaactgcag
     1081 cttgccggcc gaatgagcgg cggtaagctt ctccagcacc aaccggcgga acagggaaga
     1141 gagaaccggc accgggagga gatagcgcgg gcgacagcag acccagcgct tgccgtcgag
     1201 cgagaagccg ccgcccggca cgatcatgtg gacgtgcgga tggtgagtga gcgccgagcc
     1261 ccaggtatgg aggaccgaga ggatgccgat gcgggcgccg aggcgctggg gatcggccgc
     1321 gatggtgatc agcgtctcgg ccgagatcgt gagcagcaga tcgtagatca ccgccttgtt
     1381 ctgataggcg atgtcggcga tccgagccgg caggctgaac accacgtgga agtagggcac
     1441 cggcagcagc ccggcctcgc gttcggcgag ccactgcttc gctgcggtcc cttggcactt
     1501 cgggcaatgc cgattgcggc aggagttata ggagattgcg gtgtgcgagc acttctcgca
     1561 gcgcaggaca tgcccgccga gcgccgccgt gcggcaacgc tcgatggccg acatcacctt
     1621 caactggtcg aggctgacgt gaccggcgtt ggcagcacgc cacgccgccc cgtggtcgcg
     1681 gaagatgtcc gcgacctcca gcgctggacg ggacatcgcc gtcgagcggt taggccggcg
     1741 gctggccttg cttgcacctg ttctcggctt tccccgaccg cttgcgcttt ggtcgcgaca
     1801 gccggtcgag cgggctctcg acggcggaga tcatgccggt cgcaacatgg gcatagcgcg
     1861 cggtggtgtc caacttggta tggcccaaca gagcctgaat ggttctgaca ttggtgtcgt
     1921 tctcgaggag gtgggtggcg aagctgtggc gcaatgtatg cagcgtcacg cccttcttga
     1981 tccccgcagc gtcggccgct tcgtggaaca agcggttgag atggcgagtg gtgatcggcc
     2041 tgccagccga ctttctgctc ggaaacagcc aacgttcctg cagggctatt ccggcatcgt
     2101 gacgcgaggg gcgcgccttc caccattgcc gtaagaggcc gagcatctcg tccggcagca
     2161 tcacgttacg gtccttgcgg cccttcgact gctcgatacg aatgatgctc tgtgccctgt
     2221 cgatatgctt gaccttgagc cgcacgatct cgctcgcccg caatccgcag ccatagccga
     2281 ggctgagcag aacgcgcgtc ttgaggcttg cggccaccgc cagcaggcgc ctcatctcgt
     2341 cgacgctcat caccagcgga agcttctgcg gctcacgaat gtgatagacc tcttccgcaa
     2401 gatccaatcg acgcagcgtt acccggaaca ggaaccgcag cccggtcatg atgcagttgc
     2461 gggtgcaaat gctcacgcct gagtcggcca gatgcagctg gaaccggcga atatcctcga
     2521 gggtggctgt atcaggggat cgcttcagaa atgcagcaaa tcgcttgcag gcgcggatgt
     2581 gacctcgctg ggtgcccgcg cagagcttgc gcgcgttcat atcctcgatc atacgctgac
     2641 gcagcggggg gatcgccatg gttgtcatag ccaactcctg tcctgagtga ggttgttgac
     2701 acctcgatcc tcaagacagg gcgcttcccc cgccacccac gatctctccc ctggggataa
     2761 tcctcaggcc gagccacacc tcgccactat cgcgtagcga tttagtgcca tggcccaaag
     2821 cgccgtttgc cgcgacgccg caacacgtcc ggagtcggcg gtgaagccga catgccgagg
     2881 accctgctca atcgacgcga ttgacccaag gcgaagtt
//
LOCUS       DATDHO010000659         1629 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_427765, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000659 DATDHO010000000
VERSION     DATDHO010000659.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_427765"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            258..524
                     /locus_tag="VIY07_12670"
     CDS             258..524
                     /locus_tag="VIY07_12670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382643.1"
                     /translation="MGLFPHALLLGALVLVTAETPSIASAQIAFPVRSVTLVVPAAAG
                     GPTDTVARLVAESMSRTLGQTVIVEGTLPKLRLLPSMRASSTTS"
     gene            521..1168
                     /locus_tag="VIY07_12675"
                     /pseudo
     CDS             521..1168
                     /locus_tag="VIY07_12675"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
     gene            complement(1296..>1629)
                     /locus_tag="VIY07_12680"
     CDS             complement(1296..>1629)
                     /locus_tag="VIY07_12680"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY6382644.1"
                     /translation="NGGLIVTPSAFSAIFRERIIALTTRLKLPAIYFSRYFVVDGGLA
                     SYGPDTIDQFRRAAGYVDRILKGEKPADMPVQAPSKFELVVNLRAAQGIDLSIPARFL
                     DVADHVIR"
BASE COUNT          366 a          448 c          495 g          320 t
ORIGIN      
        1 gtggaaattc ggaaatgatc cactgccagc ggacatcgcg atgggatttg cgcgatgtcg
       61 gcccccgaga gcggatatgg tggcgcgacg aaatgtccgc tgagggccaa cagcctactc
      121 gtgtggcgta ctatgccggc gctattcgat cactgaccgc gcggtcgacc cataattgcg
      181 gccgcggtcg ggccgcttta aagaagggtc agcgtccgac aaaagggcgc actgctgcga
      241 acttagggag tttggccatg ggtttgtttc ctcacgcgct gttgctcggc gcgctcgtcc
      301 tcgtgactgc ggagacgcca agcatagcgt cagcgcaaat tgcgtttccg gtgaggtcag
      361 tcacgctcgt cgtaccggcg gcagcgggag gccctacgga tacggttgcg cgtctcgtcg
      421 ccgaatcaat gagcaggaca ctcggccaga ccgtgatcgt cgagggcaca ttgcccaagc
      481 tacggctcct gccctctatg agggcctcaa gtacgacgtc gtgaatgact tcgatcatct
      541 cggccgcatc accgacgtgc cgatgacgtt ggtatccaag accgccgttc cagccaagaa
      601 tgtaacggag cttctggatt ggatacggtc agaaggtggc aaggtcactt atggccacgc
      661 aggcgtgggt tcggcctcgc acttgtgtgc gttgatcttt atgaaagaaa tccgagtgca
      721 gatgcaggga gtagcttacc gcggcacggg tccagccatg aacgacttga taagcggtca
      781 gttcgatttc atgtgcgacc agacgaccaa taccaccaac cagatcaaag aaggctagat
      841 caaaggttac gccgtcacga ccaagttcaa agtctcgtcg gttccggacc tgccgacttt
      901 ggacggcggc gcgatcccgg gcttcgaggt ggcggcgtgg cacgctatgt gggcgccaaa
      961 gggtttgccg aaagacgttt cagacaaact cgtcacagca ctgcaggcag ctatcaaaga
     1021 tccgaaagtg attgagcgat tcggtggcct cggcacggag cctgttgctt ccgcactggc
     1081 aactcccgat gcgctgaaat cacatctcgc cgccgaggtg aaacgatggg acacggttat
     1141 caaggcggcg ggggttaaag gcaactaggt acagcgacga gcggacacta ccgattgttt
     1201 tgaatatcgc tcaaggactg aagcgggcat caagcgcggt ccggcgccta acgaaatgtc
     1261 cgctacgcaa acggatcttg ccagacgctt cgcaattatc tgatcacgtg gtcagcgaca
     1321 tcgagaaagc gcgctggaat actaagatcg atcccctggg cggccctgag attgaccacg
     1381 agttcaaatt tggacggcgc ttgaactggc atgtcggcgg gcttttcacc cttaaggatg
     1441 cgatcgacgt agcctgccgc gcgacgaaac tggtcaatcg tatcggggcc ataggaggcc
     1501 agaccgccgt caaccacaaa gtatcggctg aagtagatcg caggcagttt aagccgagtg
     1561 gtaagcgcga tgattcgctc ccgaaagatc gccgaaaacg cgctcggcgt tacgatcaga
     1621 ccgccattt
//
LOCUS       DATDHO010000660         3270 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_229048, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000660 DATDHO010000000
VERSION     DATDHO010000660.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3270)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3270)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3270
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_229048"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            111..596
                     /locus_tag="VIY07_12685"
     CDS             111..596
                     /locus_tag="VIY07_12685"
                     /inference="COORDINATES: protein motif:HMM:NF017950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF992 domain-containing protein"
                     /protein_id="HEY6382645.1"
                     /translation="MLRICLLLATLCLSAMFSMPAAAQAWTQIGTLSCRVDPNIGFII
                     VGHQPMQCVYTQAPGALPQVPPQSYDGALNTIGLSIGFSAGSVLAWAVFAPTTGVPAG
                     ALAGEYVGVSADVGIGLGAGANILLGGSNRTIALQPLSLQGSAAVNVIAGVSSLKLRW
                     H"
     gene            complement(641..1165)
                     /locus_tag="VIY07_12690"
     CDS             complement(641..1165)
                     /locus_tag="VIY07_12690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382646.1"
                     /translation="MRRTFDSPFRLLPAGILGCSLLALVSFYIPLPSALAQAGPFAEF
                     AGSWSGSGSLKPENGTAERIRCNATYRPGRNPRDVELQLRCASESYNFDLIGQFTADE
                     QNQVSGRWTERTRSTGGTAVGNARGDRLQLHIESAGFAADLVMVTRNKRQSVDIDSHG
                     AGQIVKASITLNRS"
     gene            1588..1827
                     /locus_tag="VIY07_12695"
     CDS             1588..1827
                     /locus_tag="VIY07_12695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382647.1"
                     /translation="MRHFNTDLYAIVFSIVISFAFLSAATAAPKLSEADDAAIKSAIA
                     SCKAEAKAKKIGFTSRRAFLRDCVTETIKNNPPKR"
     gene            complement(1824..2657)
                     /locus_tag="VIY07_12700"
     CDS             complement(1824..2657)
                     /locus_tag="VIY07_12700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HEY6382648.1"
                     /translation="MHSVDPDSTLGRILNFIGQNLKVDKLFIDMGFDPNHFTWEAVFH
                     RVVELVWANINVANSLALVGAIFYVATLMMRTIVPLRVIGIISIAFFIAYGVVAGAVS
                     TLLLYLLSLPINVIRLRQMLTLVKKARTSAQGDLSMDWLRPYMTPRKYRKGDVLFRKG
                     DVANEMFLTVTGKFLVAEINIEVPPGRIMGELGFVAPKNRRTQTVRCIESGDVLTITY
                     ETLLELYFQNPEFGYYLLSLTSERLLQNVSRLEGMVEEYKKKLDQYEIRQAGTPVPVP
                     R"
     gene            complement(2845..>3270)
                     /locus_tag="VIY07_12705"
     CDS             complement(2845..>3270)
                     /locus_tag="VIY07_12705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HEY6382649.1"
                     /translation="SQSGPRDLKQVWFPGVHDDVGGGYPEAESGLSKIALQWMLNEAI
                     NAGLLVSPGRMDLVLGKTGTYATPDANAMLHESLTGLWWLAEILWKRHYNWVKRQWER
                     QPNLGRRRTIPPGSLIHESAYKRGGDYAKRLPPDAIPTR"
BASE COUNT          675 a          951 c          952 g          692 t
ORIGIN      
        1 cttcgccggg aagcgacccg gcaatgctcc ggcacgctgc ctcgcagcgg caccagctga
       61 cgattgagga cgaatcaacg aaaggctttc agcaagcaag ggcgactaac atgcttcgta
      121 tttgtttgct gcttgcgacg ctttgcctga gcgcgatgtt ttccatgccc gccgccgcac
      181 aggcctggac gcagatcggc acattgtcgt gcagagtcga tccgaacatc ggatttatca
      241 tcgtcggcca tcagccaatg caatgtgttt atactcaagc ccctggcgca ctgcctcagg
      301 tgccgcctca atcttacgac ggcgccctca acacgatcgg cctgagcatc ggtttcagcg
      361 ccgggagcgt gttggcatgg gctgtgtttg cgccgacaac cggggtaccg gccggcgctt
      421 tggccggaga atatgtgggc gtgtcggccg atgtcggcat cggcctgggt gcaggcgcga
      481 atatcctgct cggcggctcg aaccgcacga tcgccctgca gccgctttcg cttcagggat
      541 ccgctgctgt caatgtcatc gccggcgtgt cgtcgctcaa gttgcgatgg cactagcgaa
      601 ttgcagggtc cgcgcgacca gcgaggatcg cgcgggccga tcaactccgg ttcagcgtaa
      661 tcgaggcctt cacgatctgc ccggcaccgt gtgagtcaat gtccacgctc tgccgcttgt
      721 tgcgcgtcac catgacaaga tcggccgcga agccggcgct ttcgatgtga agctggagac
      781 ggtcgccgcg cgcattgccg accgccgtgc cgcctgtgct gcgggtgcgt tcggtccagc
      841 gaccactgac ctgattttgc tcgtcagccg tgaactggcc gatcaaatcg aaattgtagc
      901 tttcgcttgc gcagcgaagt tgcagctcga catcacgcgg attgcggccg ggacgatagg
      961 tcgcattgca acggattcgc tccgcggtcc cgttctccgg cttgagtgat cctgatccgg
     1021 accagctgcc ggcgaattcg gcgaatggac cagcctgcgc aagtgccgac ggtagcggga
     1081 tatagaatga taccaaggca agcaaactgc agccgaggat gcctgctggc aaaagcctga
     1141 atggactatc gaatgtgcgc cgcaagagtc tgtcccttca aagttagtgt tgaagatgaa
     1201 ggaaagcccc ccatccataa acggtgaaag gggtagttct ggttcccggc taggatggct
     1261 gtccgggccg gctccgtcta ctgagatatc gtgacggttt cagggtcgct ggcgccgcag
     1321 gttattgccg ttgaggtccc ggtcccttct tcgcggatcg gctgcagggt ggctcccaat
     1381 gtgaatgtgc gagccgcact ccgacgatgg tcgcctcgat ggtgtcatgg ctcttgccgc
     1441 cgagaacggc aatttgtcgc acaccattct gccgcgacaa gtcgcatcgc aaactttgcc
     1501 gatgctggcg cgctggcaaa cgcacttgag ttgcaccgcg gtcccccgat actgcatatt
     1561 gcagcgataa ggactcaagg aaacctgatg cgccatttca acacagactt gtacgccatt
     1621 gttttttcga tcgtgatttc gttcgcattt ctgtccgcag ccaccgcggc gcccaagctg
     1681 tcggaggctg acgacgcagc cattaaaagc gcgatcgcct cctgcaaagc cgaggctaaa
     1741 gccaagaaaa ttggctttac atcacgtcgg gcatttctca gagattgcgt gaccgagacg
     1801 atcaaaaaca atccgccgaa gcgctagcgc ggcaccggga caggcgtacc ggcctgccga
     1861 atttcatatt gatccaactt cttcttgtat tcctcgacca tgccctcgag gcgagacaca
     1921 ttttgcaaaa ggcgttcgct ggtcaggctt agcagataat aaccaaactc cggattttga
     1981 aagtaaagct caagcagcgt ctcatacgtg atggtgagca cgtccccgct ttcaatgcat
     2041 ctgactgtct gcgtccgccg atttttcggt gcaacgaaac caagttcgcc catgatgcgc
     2101 ccgggaggaa cctcgatatt gatttccgcc accaggaatt ttccggtgac cgtgaggaac
     2161 atttcgttcg ccacgtcccc tttgcggaat agcacgtcgc ccttgcggta ctttctcggc
     2221 gtcatgtacg gcctgagcca atccatcgac aaatcgcctt gcgcggatgt ccgcgccttc
     2281 ttgacgagcg taagcatctg gcggaggcga atgacgttga tcggcagcga gagcaggtaa
     2341 agcaataatg tcgacaccgc gcccgcgacg acgccgtacg cgatgaaaaa agcgatgctg
     2401 atgataccga tgactcgaag cggcacgatc gtgcgcatca tcagggtggc gacgtagaaa
     2461 atggcgccga ccagcgcgag cgaattggcg acgttgatgt tcgcccacac gagttccacc
     2521 acgcgatgga atacggcctc ccaggtgaag tgattgggat caaaacccat gtcgataaaa
     2581 agtttatcga ccttgagatt ttgcccaatg aaattgagga tgcgacctaa agttgaatcc
     2641 ggatcaacgc tatgcatgct tcccccacgg aagtctggcg gacggcgcaa gtggcccaat
     2701 tcctgtcgat attacagcgc gttcacgcag taatcgagtg agggttccaa atggcgttgt
     2761 tgccgcctgc aggtgctgaa agactgtgtg cgctcgtcca acggacctgg aggcccacta
     2821 cggcccaccg gttctagcac tctctcaacg agtcggaatc gcgtcgggtg gaaggcgttt
     2881 cgcatagtcg ccgccacgtt tgtaagccga ctcatggatg agcgagccag gaggaattgt
     2941 gcgccggcgg ccgagattgg gttggcgttc ccattgacgc ttcacccaat tgtaatgccg
     3001 tttccagaga atttccgcga gccaccaaag tcccgtcaac gactcgtgca acatcgcatt
     3061 ggcgtcgggc gtggcgtagg tgccggtttt tccgagcacg aggtccatcc ggccgggact
     3121 tacaagaagg cccgcgttaa ttgcctcgtt gagcatccac tgaagggcta tcttggagag
     3181 gccgctctcg gcttccggat agccgccacc cacatcgtca tgaacgcccg gaaaccagac
     3241 ctgcttgagg tcgcgtgggc cgctttgaga
//
LOCUS       DATDHO010000661         5334 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_473312, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000661 DATDHO010000000
VERSION     DATDHO010000661.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5334)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5334)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5334
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_473312"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1663)
                     /locus_tag="VIY07_12710"
     CDS             complement(<1..1663)
                     /locus_tag="VIY07_12710"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing)"
                     /protein_id="HEY6382650.1"
                     /translation="MADTEPPKSGDASPSDVRPVSITEEMKRSYLDYAMSVIVSRALP
                     DVRDGLKPVHRRILHSMNENGHTPDKKYVKSARVVGDVMGKYHPHGDQAIYDALVRMA
                     QDFSMRLLLIDGQGNFGSVDGDPPAAMRYTECRLARPAMALLDDIDKDTVDFQENYDG
                     TEKEPLVLPARFPNLLVNGAGGIAVGMATNIPPHNLGEVIDAATALIDNPALTIDDLI
                     KIVPGPDFPTGGIILGRDGIRSAYTEGRGSIVMRGKVEAETIRKEREAFIITEIPYQV
                     NKAAWVERFAELVREKKIDGVADLRDESDRQGYRVVVELKREAVPDVVLNQLYRFTPL
                     QSSFGCNMVALDGGRPLVMTLKDMLSAFIAFREEVVSRRTKHLLGKARDRGHVLVGLA
                     IAVANIDEFIRLIRAAKDPNAAREALMARDWPAKDVAAMVTLIDDPRHKISPKGTTRL
                     SAEQARAILDLRLQRLTALGRDEIKQELDKLKAEIADYLDILRSRSRIQEIIKKELAD
                     VKKEFATPRRTVIAEATGQVDEEDLITREDMVVTVSHQGYIKRVPL"
     gene            2000..2623
                     /locus_tag="VIY07_12715"
     CDS             2000..2623
                     /locus_tag="VIY07_12715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEY6382651.1"
                     /translation="MPVEFFISALVTLVVVVDPIGLVPSYLAITHGLPENARRNVALR
                     AALIAASILAGSALIGDWLLRALSIGLPAFRIAGGLLLFSIASEMVFGVRIERQSQQA
                     EQAVEEHVRNIAAFPLAIPLMAGPGAITATILLASREGDSTRLMILFAVIVIVLALCF
                     VVFALAARIAKWLGVTANVVASRLLGVLLAALAVQYVIDGVRAAMSG"
     gene            2705..3148
                     /locus_tag="VIY07_12720"
     CDS             2705..3148
                     /locus_tag="VIY07_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1772 domain-containing protein"
                     /protein_id="HEY6382652.1"
                     /translation="MKLLQFVAMVLTALALVPGGAHLFALPNKINLSESDYFIAQSVY
                     RGWALLGIVLIGAAIANFALALLIRAQRAPSIFALIGGLCLVATLLIFFAFTFPANQA
                     TNNWTQIPPDWEQLRWRWEASHAVNAVITFIAFCSLTISLLLTRK"
     gene            3294..3842
                     /locus_tag="VIY07_12725"
     CDS             3294..3842
                     /locus_tag="VIY07_12725"
                     /inference="COORDINATES: protein motif:HMM:NF017897.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mpo1-like protein"
                     /protein_id="HEY6382653.1"
                     /translation="MNEYFRRQLGIYASYHRDERNCLTHMFGIPIIFFAVILPLSLWQ
                     MNLFGLQTNAATVLVIPAVIAWLLLDFAIGLAIAGIVALLVWTAALVVGHVTPTVVWL
                     VAVGLFVVGWALQIVGHARFEHRKPAMLDNPMHMLIGPMFIVAKMFMALGFRRDLALA
                     IQPPTQQTADVLPHHGDVFRQP"
     gene            3839..4831
                     /locus_tag="VIY07_12730"
     CDS             3839..4831
                     /locus_tag="VIY07_12730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY6382654.1"
                     /translation="MTRALVTGGSGFIGHHLVSALVASGNKVRILDIRPPKNLQPGAQ
                     YIKGTVLDPTAVAESLREIDVVYHLAALPGMWTPQRRDFHTVNMQGTEIVLSAAREYG
                     ISRFLHCSTESVLFGRRNSEPAGLENVRTTLAEMPGDYTRSKWEAEQLALKAAESGFH
                     VVIATPTMPIGLDHNCTPPTAMLKYFLCRRIPFYLDFVVNLVDVRDVAAGMILVLERG
                     QAGERYILGGENLSLEMLLERVAAIAGHRFRSFQIPGAAASAVALAMEWVADHVTRRS
                     PAATIEGVRIALRAKALSSEKARRELGYAPRPIEAALLETINEMLASAATGVGR"
     gene            complement(5039..>5334)
                     /gene="ssb"
                     /locus_tag="VIY07_12735"
     CDS             complement(5039..>5334)
                     /gene="ssb"
                     /locus_tag="VIY07_12735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEY6382655.1"
                     /translation="GLAKIAEQYLKKGSKVYLEGSLQTRKWQDKDGQDRYSTEVVLQG
                     FNSALTMLDRAGAGAGADNGDFGSPGPTASRERKPAMAGAGGKHDDMDDEIPF"
BASE COUNT          962 a         1616 c         1532 g         1224 t
ORIGIN      
        1 aaagcggcac gcgttttatg taaccctggt gggagaccgt aaccaccatg tcctcgcgtg
       61 taatgagatc ttcttcgtca acctggccgg tcgcctccgc gatcacggtc cgccgcggcg
      121 tggcgaactc ttttttcaca tcggcgagtt cttttttgat gatttcctgg atgcgggagc
      181 gcgagcgcag gatgtcgaga tagtcggcga tttcagcttt aagcttgtca agctcctgct
      241 tgatttcgtc gcggccaagc gcggtcagac gttgcaggcg cagatcaaga attgccctcg
      301 cctgctcggc cgaaagcctg gtcgtgccct tgggcgagat cttgtgacgc ggatcgtcga
      361 tcagcgtaac catggcagcc acgtccttcg ccggccagtc acgcgccatg agcgcctcgc
      421 gggcagcgtt cggatccttt gccgctcgaa tgagcctgat gaactcgtcg atgttggcga
      481 ccgcaatcgc aagaccgacc agcacgtgac cgcggtctct cgctttgcca agcagatgct
      541 tggtgcgccg cgatacgacc tcttcgcgaa acgcgatgaa ggcgctgagc atatccttca
      601 gcgtcatcac cagcgggcgg ccgccatcga gtgccaccat gttgcacccg aacgacgact
      661 gcagcggcgt aaaacggtaa agctggttca gcacgacgtc cggcaccgct tcgcgcttga
      721 gctcgaccac gacgcggtat ccttgccggt cgctctcgtc gcgcagatcc gccacgccgt
      781 cgattttttt ctcgcgcacg agctcggcaa agcgctccac ccatgcggcc ttgttcacct
      841 ggtacggaat ctccgtgatg atgaaagcct cgcgttcctt gcgaatggtc tccgcctcga
      901 ccttgccacg catgacgatc gagccgcgac cttccgtata ggccgagcga ataccgtcgc
      961 ggccaaggat aatgccgccg gtcggaaaat ccggcccggg cacgattttg atcagatcgt
     1021 cgatggtgag ggccggattg tcgatcaatg ctgtcgcggc atcgatcacc tcgccgagat
     1081 tatgcggggg aatattggtc gccatgccga ccgcgatgcc gcccgcgccg ttgaccagca
     1141 aattcgggaa gcgcgccggc agtaccagcg gctccttctc ggttccgtcg tagttttcct
     1201 gaaagtcgac ggtatccttg tcgatgtcgt cgagcagcgc catcgccggc cgcgccagcc
     1261 ggcactcggt gtagcgcatc gccgccggcg gatcgccgtc gaccgagccg aaattgccct
     1321 gcccgtcgat cagcagcagg cgcatggaga aatcctgcgc catccgtacc agggcgtcat
     1381 agatggcctg gtcgccgtgc gggtgatatt tgcccatcac gtcgccgaca acgcgggccg
     1441 acttgacgta tttcttgtcg ggcgtgtgcc cgttctcgtt catcgaatgg agaatgcgcc
     1501 gatgcacagg cttgaggccg tcgcgcacgt cgggcaaggc acgcgacacg attacgctca
     1561 tcgcgtaatc gagatagctg cgtttcatct cctcagtgat ggaaacgggg cgcacatcgg
     1621 acggcgatgc gtcccccgat ttcggaggtt cggtgtcggc caagacgagg tcctgcgtgg
     1681 aatttttagt cgcggttttt tagctgattc agcgctgttt tgccaaccga aatgcgccgc
     1741 tatacaggct attttcatcc actaattcaa aggcttatgg gctctagcca ggttccaaaa
     1801 tagcgccggt ggtaagcact aaccaggctc agaaatttac agtttgtcac ccggaatgaa
     1861 caaagatttt tgcatgctca cgaatgtata tggccttcgc tccgacacca tttttccctc
     1921 gaaaacgacc ggccctttgc aaagaccgga cctcgcttgc gcgaggcaag cggaccttgt
     1981 gatagcctga gcgccgcgca tgccggtcga atttttcatc tctgcgcttg tcacactggt
     2041 cgtcgtcgtc gatccgatcg gccttgtccc ttcctatctg gcgatcacgc atggcttgcc
     2101 tgagaatgcg cggcgcaacg tcgcgcttcg tgccgcgctg atcgctgcgt ctattctcgc
     2161 cggcagcgcg ctgatcggcg actggttgct gcgcgcgctc tcgatcggct tgcccgcgtt
     2221 ccgcatcgcg ggtggattgc tgctgttctc gatcgcttcc gaaatggttt tcggcgttcg
     2281 gatcgagcgt cagtcgcagc aggccgaaca ggccgtcgaa gagcacgttc gcaacatcgc
     2341 cgcgttcccg cttgcgattc cgttaatggc cggtcctggc gcgatcacgg caacgattct
     2401 gctcgccagc cgtgagggcg attccacgcg tctcatgatc cttttcgcgg tcattgtcat
     2461 cgtcctggct ctctgctttg tggtttttgc gctcgcagct cgcattgcca aatggctcgg
     2521 tgtgaccgcg aatgttgtgg cctcgcgcct gcttggcgta ctgcttgcgg cgctggcggt
     2581 tcaatacgtg atcgatgggg tgcgcgcagc gatgtcgggc tgattttacc gtctcgagga
     2641 tcttcaggaa ctctcgcaag cacagcgtcg ttgtctatgc cgggcggcca cttgcggggt
     2701 tcatatgaaa cttttgcagt tcgtcgccat ggtcctgacc gcactggcat tggttccggg
     2761 cggcgcacac ctgttcgccc taccgaacaa gatcaacctg agcgaaagcg actactttat
     2821 cgcgcagagc gtctatcgcg gctgggcgct gctcgggata gttttgattg gagcagcaat
     2881 tgcaaacttt gcgcttgcat tgctcatccg cgcgcagcgc gcaccctcga tcttcgcgct
     2941 gatcggcggg ctctgtcttg tcgccacgct cctcatcttt tttgctttca cctttccagc
     3001 caatcaggcg accaacaact ggacccagat tccccccgat tgggagcaac ttcgctggcg
     3061 atgggaagcg tcgcacgcgg tgaacgcggt gatcacattt atcgcgttct gctcgctaac
     3121 catctcattg ctattgacgc ggaagtgaat gcgcgcgctt gtccgcagga gcaaggcgga
     3181 gggctttgac cgttcaacca gtgattgtag acgccgccgt atttgcggtg ccaaatactg
     3241 atcacaagtt tgccgtaacg ttcatgtcat aagccttcgc gcgaggcgtc aaaatgaatg
     3301 aatatttccg acgtcaattg gggatctacg cgagctacca tcgtgacgag cgcaattgcc
     3361 tcacgcatat gtttgggatt ccgattattt ttttcgcggt tattctgcct ttgagccttt
     3421 ggcagatgaa cctgttcggc ctacagacca atgccgcaac agtactggtc atacctgccg
     3481 tgattgcctg gcttctcctc gactttgcaa ttggtctcgc aatcgccgga attgtcgctc
     3541 tgcttgtgtg gactgccgcg ctcgtcgtcg gccatgtcac ccccaccgtg gtttggcttg
     3601 tcgcggtcgg attgtttgtc gtcggctggg cgctgcagat tgtcggccac gctcgcttcg
     3661 aacatcgtaa gccggcgatg ttggacaacc cgatgcacat gttgattgga ccgatgttca
     3721 tagtcgcaaa aatgtttatg gcccttggct ttcgacgtga cctggctttg gcaattcaac
     3781 cgccgaccca acagactgcc gatgtcttgc cacatcacgg cgacgtcttt cgtcaaccgt
     3841 gacacgggcc ctcgttacag gcggcagcgg ctttatcggc catcaccttg tgtcggcgct
     3901 cgttgccagc ggcaacaagg tgcgcatcct cgatattcga cctccgaaaa atctccagcc
     3961 cggcgcgcaa tacatcaaag gtacagtgct ggatccaact gccgttgccg aaagcctccg
     4021 cgaaatcgat gtcgtctacc atctcgcggc gctccccggg atgtggacgc cgcaaaggcg
     4081 ggacttccat accgttaata tgcaggggac tgagatcgtc ctttccgccg cgcgcgagta
     4141 cggcatttcg cgctttctgc actgctccac tgaatctgtt cttttcggtc gacggaattc
     4201 agaacccgcg ggtttggaga atgtgagaac gacattggcc gaaatgccgg gcgattacac
     4261 gcgctcgaaa tgggaagccg aacagcttgc gctcaaggca gcagaatccg gatttcacgt
     4321 cgtgattgcc actccgacca tgccaatcgg gctagaccac aattgcacgc ccccgacggc
     4381 catgttgaaa tattttcttt gccgccgcat tccattttac cttgatttcg tggtcaacct
     4441 cgtcgacgtc cgtgacgtcg cagcaggaat gatacttgtc ttggagcggg ggcaagcagg
     4501 cgagcgatat attctcggcg gtgaaaatct ttcgctagaa atgttgctcg agcgagtcgc
     4561 cgcgatcgcg gggcatcgct ttaggtcgtt tcaaattccg ggcgcggccg cgagcgcagt
     4621 cgctctcgca atggaatggg tcgcggatca cgtgacgcgt cgttcacctg ccgccactat
     4681 cgaaggtgtg cgcatcgcct tgcgcgccaa agcactgtca agcgagaagg cgcggcgcga
     4741 gcttggctat gcgccacgcc cgatcgaagc ggcactgctg gaaactatta atgagatgct
     4801 cgcttcggca gcaaccggtg tcggccgata attgcgcctc agaacgggat ctcgtcgtcc
     4861 atgtcgtcgt gcttgccgcc cgcgccgcca caactctccg ttcattcccg cgtaagcggg
     4921 aatccagagt aaacctttct tgcgcgaaca gattgactgg gtccccgctg gagcctgtgc
     4981 tcgggccagc cgaaggctgg acccgagtac ggggacgaac ggttagaggc cggacaggct
     5041 agaacgggat ttcgtcgtcc atgtcgtcgt gcttgccgcc cgcgccggcc attgccggct
     5101 tgcgctcgcg cgacgccgtc gggccgggtg aaccgaaatc gccattgtcg gcgcccgccc
     5161 ctgcgccggc ccggtcaagc atggtcaggg ccgaattgaa gccctgcagc accacctcgg
     5221 tcgaataacg gtcctgcccg tccttgtcct gccatttgcg tgtctgcaga gagccttcga
     5281 gataaacctt cgagcccttc ttcagatact gctcggcgat ctttgcgagc cctt
//
LOCUS       DATDHO010000662         2893 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_428039, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000662 DATDHO010000000
VERSION     DATDHO010000662.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428039"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..678
                     /locus_tag="VIY07_12740"
     CDS             <1..678
                     /locus_tag="VIY07_12740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope biogenesis protein TolA"
                     /protein_id="HEY6382656.1"
                     /translation="VETPKPLVEKKAEEPKPVEDSKAKLTEKKEVQAAKEIAPPPEPQ
                     PPKADPIADKIKQQDEPKQQVKVEQPLPPKKPPQRQQPKFDADRIAALLDKRDPVRHA
                     AVGMEANAMPSLGTPSGMAAKLSQSEIDALRARLMALWSPPVGVQDPNELIVNITVKL
                     RPDGRLAAPPFARVNGRTVAAMASRDSAVRAVLTGQPFDMLKPEHYESWKEIELTFDP
                     KDMYRAN"
     gene            693..2018
                     /gene="tolB"
                     /locus_tag="VIY07_12745"
     CDS             693..2018
                     /gene="tolB"
                     /locus_tag="VIY07_12745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HEY6382657.1"
                     /translation="MTSSRSRAPLPLTRRRLLVGAGALAVFAPRSAGAVLRLDITQGN
                     VQPMPIALPDFVSEADTGRNVTSVITSNLQRSGLFAPINPAAFIERITNSDNVPRFQD
                     WRAINAQALVTGRITRQGDGRLKAEFRLWDVFAGQQLDGKQYFTTPDNWRRIAHIISD
                     AIYERLTGEKGYFDSRIVFVDETGPKDRRVKRLAIMDQDGAGVRYLTRGDDLVLTPRF
                     NPSTQEITYMSYGQGDPRVYLLNIETGQREIVGNFPGMTFAPRFSPDGQRVIMSLQQG
                     GNANLFVMDLRSKQTMRLTDTPAIDTAPCYSPDGTRICFESDRGGSQQIYIMPAAGGP
                     AQRISFGEGHHSTPVWSPRGDYIAFTGQARGNFAIGVLKPDGSGERMLTEGFHNEGPT
                     FAPNGRVLMFFRDVGQGPALYTIDISGRNEIRVPTPAYASDPAWSPLLS"
     gene            2201..2695
                     /gene="pal"
                     /locus_tag="VIY07_12750"
     CDS             2201..2695
                     /gene="pal"
                     /locus_tag="VIY07_12750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HEY6382658.1"
                     /translation="MIDVRKMLHVARLAAVLAAALAISACARTAEDAQANAAGQATPG
                     SQQDFVVNVGDRVFFETDSSELTPQSRGTLDKQAQWLTNYSQYSQFTVEGHADERGTR
                     EYNIALGARRAQAVRDYLISRGIQGHRMRTISYGKERPVAVCNDISCWSQNRRAVTVL
                     GVSS"
BASE COUNT          614 a          870 c          872 g          537 t
ORIGIN      
        1 gtggaaacgc caaagccgct ggtggagaaa aaggcggaag agccgaagcc ggtcgaggat
       61 tcgaaggcca aactcacaga gaagaaagaa gtgcaggcag caaaagaaat tgccccgccg
      121 cctgagccgc agccgccgaa ggccgacccg attgccgaca agatcaagca gcaggacgaa
      181 ccgaaacagc aggtcaaggt cgagcagccg ctgccaccga aaaagcctcc acagaggcag
      241 cagccgaaat tcgacgccga cagaatcgcg gctttgctcg acaagcgcga tcctgtacgc
      301 cacgcggcgg tcgggatgga agcgaatgcg atgccctctc tggggactcc ctcgggcatg
      361 gctgccaagc tgtcgcaatc cgaaatcgat gcgttgcgcg cgcggctgat ggcgctgtgg
      421 agtcccccgg tcggcgtgca ggatcccaac gagctgattg tgaatatcac cgtcaagctg
      481 cgtcccgacg gccggctcgc ggctccgccc tttgcgcgcg taaatgggcg caccgtggcc
      541 gcaatggcat ctcgcgacag cgcggtgcgc gctgtgctca ccggccagcc gttcgatatg
      601 ctcaagcccg agcattacga aagttggaag gaaattgagc tgaccttcga tcccaaagat
      661 atgtaccgcg ccaactagtc ctcatgttca aaatgacaag ttcccgatca cgtgcgcctt
      721 tgccgttgac ccgccgccgc ctgctcgtag gagccggtgc actggcagta ttcgcgccac
      781 gctccgcggg cgcggtgctc agactcgaca tcacgcaagg caacgtgcag ccgatgccga
      841 ttgcgctgcc ggacttcgtt tccgaagccg acacgggccg caatgtcacg tctgtgatca
      901 ccagcaatct tcagcgtagc ggcctcttcg cgccaatcaa tccggccgct ttcattgagc
      961 gcatcaccaa cagcgataat gtgccgcggt ttcaggactg gcgggcgata aatgcgcaag
     1021 cacttgtgac cgggcgcatc actcgccagg gcgacggacg gctgaaggca gagtttcgtc
     1081 tctgggatgt gttcgccggc cagcagcttg acggcaaaca atacttcacg acgcccgaca
     1141 attggcgacg tatcgcacac ataatttcgg acgcgattta tgagcgcctt accggcgaga
     1201 agggatattt cgatagtcgg atcgtgttcg tggatgaaac aggtccgaaa gaccggagag
     1261 tgaagcgcct tgccatcatg gatcaggacg gtgcaggggt gcgctatctg acacggggcg
     1321 acgacctcgt gctgacgccg cgtttcaatc catcgacgca agagatcacc tacatgtcct
     1381 atggccaagg cgatccacgc gtctatttgc ttaatatcga aaccggacag cgggagattg
     1441 tcggcaattt ccccgggatg acttttgccc cgagattttc gcccgatggt caacgtgtga
     1501 tcatgagcct gcagcaaggt gggaatgcca acctgttcgt gatggatctg cggtcgaagc
     1561 agaccatgcg gctcaccgac acgcctgcga tcgacacagc gccctgctat tcgccggatg
     1621 gcacgcgcat ctgcttcgag agcgatcgag gaggttcaca gcagatctac atcatgccgg
     1681 ctgccggcgg gccggcgcag cgcatcagct tcggcgaggg ccaccattcg acgccggtct
     1741 ggtcgccacg cggcgactac attgccttca ccggccaggc gcgagggaat tttgccatcg
     1801 gcgtgttaaa gcccgacggc tcgggcgagc gcatgctcac ggaaggcttt cacaacgaag
     1861 gcccgacgtt tgcgcccaat ggacgcgttc tgatgttctt ccgcgacgtc ggccagggcc
     1921 cggcgcttta cacgatcgat atctccggtc gcaatgaaat ccgggttcct acgccggcct
     1981 atgcatcgga tccggcgtgg tcgccgcttt tatcctgaat tgtcgcaaac cggccttatt
     2041 ttcaccgtgt cttaaccatc agaaatggtt taagggactc cgattatttt actgggcctg
     2101 tgcaaggttc catcaaggtt gatggaacgt tcgtttaacg aacgacctgc tagacccaca
     2161 ggtgaagctc cggtcggaag cgtgaaatgg aggcaccgga atgatcgatg tgaggaagat
     2221 gctgcacgtt gctcggcttg cggcggtctt ggccgcggcc ttggcgatct cggcctgcgc
     2281 cagaacggca gaggatgcgc aagcaaacgc ggcgggacag gcgacgcccg gcagccagca
     2341 ggacttcgtc gtcaatgtgg gcgaccgtgt atttttcgaa accgattcgt ccgagctgac
     2401 gccgcagtca cgcgggactc tcgacaagca agcgcagtgg ctcaccaatt acagtcagta
     2461 ttcgcagttc accgttgaag gccatgctga cgaacgcggc acgcgcgagt acaatatcgc
     2521 actcggcgcg cgtcgcgcgc aggccgtgcg cgactatctg atctcgcgtg gcatccaggg
     2581 tcatcgcatg cgcacaattt cgtacggcaa agagcggccg gttgcggtct gcaacgacat
     2641 ctcctgctgg tcacagaacc gccgcgccgt caccgtgctc ggtgtgagtt cgtaaagcgc
     2701 tcgacgcgga aaacgcgcga gacttgggta gccgggaaag cccccgccat gacgaagcgg
     2761 gttgcagtca caatttcgac gcagcgcggc ctatggtatc ctgactggga aaacggccgc
     2821 tcgcggccac atctgccatg acccgtacac gatcattacc ccgaactgcg gcgcttgccg
     2881 caatttccgc ttt
//
LOCUS       DATDHO010000663         1658 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_130857, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000663 DATDHO010000000
VERSION     DATDHO010000663.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_130857"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..>1658
                     /gene="carB"
                     /locus_tag="VIY07_12755"
     CDS             20..>1658
                     /gene="carB"
                     /locus_tag="VIY07_12755"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: protein motif:HMM:NF003671.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEY6382659.1"
                     /translation="MGFADFRIAALTDDSEREIRKLRKEKGIDAVFCSVDTCGAEFAA
                     FTPYLYSTYEGEDESKPTPRKKIMILGGGPNRIGQGIEFDYCCVHAAFALREEDYETI
                     MVNCNPETVSTDYDTSDKLYFEPLTLEEVLNIVERENPDGVIVQFGGQTPLKLALALE
                     RAGVKIIGTSPDSIDLAEDRERFAQLINRLGIKQPENGIARSYEEAFKIAERLGYPIL
                     VRPSYVLGGRAMEIVYDGAALKHYMTHAVSASPEHPVLIDKFLDDAIEIDVDALGDGE
                     EVVIGGIMEHIERAGVHSGDSACSLPPKSINEPIKDEIRRHTVALGKALNVRGLMNVQ
                     FAVQGTSVFVLEVNPRASRTVPFVSKAIGVPLAKVAARVMVGRRLKELGLTGEILPKH
                     ISVKEAVFPFNKFPGVDTLLGPEMKSTGEVMGIDVSFGLAFAKAQLGGGMRLPKSGRV
                     FISVRDEDKKPVTAAAEKLHRAGFQIVATRGTAAYFAARGIPAEVVNKVQEGSPHIAD
                     QIKSGEIAMVINTPTDAHSQADSYQLRRCALDYQIPYF"
BASE COUNT          368 a          462 c          483 g          345 t
ORIGIN      
        1 gttgcggtcg tggaaacaga tgggctttgc ggattttcgt atcgctgcgc taacggacga
       61 tagcgaacga gaaatccgta aactacgaaa agaaaaaggc atcgacgcgg tgttctgttc
      121 cgtggacacc tgcggcgctg agtttgcagc ttttaccccc tatctctatt ccacctacga
      181 aggggaggac gaatccaagc cgacgccgcg caaaaagatc atgattctgg gtggcggccc
      241 taaccgcatc ggtcaaggaa tcgaattcga ttactgctgc gtgcacgccg ccttcgctct
      301 cagagaagag gactacgaaa cgatcatggt caactgcaac ccggaaactg tcagcaccga
      361 ctacgatacc tcggacaagc tctacttcga gcctttgact ctggaggagg tcttgaacat
      421 cgtcgagcgg gagaatcccg atggcgtgat cgttcaattt ggcggccaga cacctttgaa
      481 gctcgcgctg gctctggagc gggccggggt gaaaatcatc ggcacgtctc ccgacagtat
      541 cgatttggct gaggacagag agcggttcgc gcaactgatc aaccgtctcg gcatcaaaca
      601 accggagaat ggcatcgccc gttcctatga agaggctttc aagatcgccg agcgtttggg
      661 ttatcccatc ctggttcgtc cgtcctatgt gctcggcggg cgcgccatgg agatcgtcta
      721 cgacggcgcc gcgctcaagc attatatgac tcatgcggtt tccgcctcgc cggaacaccc
      781 ggtcttgatc gacaaattcc tcgatgacgc catagagata gacgtcgacg ctctcggaga
      841 cggcgaggag gtcgtgattg gcggcattat ggagcacatc gagcgcgcgg gagtccactc
      901 cggcgacagc gcctgcagcc tgccgccaaa atccatcaac gagcctatca aggatgaaat
      961 tcgccgccac acggtagcgc tggggaaggc cttgaacgtg cgcggtctga tgaatgttca
     1021 atttgccgtg caaggaacca gtgtcttcgt tcttgaagtc aacccacgag cgtcgcggac
     1081 agtgcctttt gtcagtaaag cgatcggcgt accactggcc aaggttgccg cgcgtgtgat
     1141 ggtgggcaga aggctcaaag aacttggtct taccggtgag atcttgccga agcacatctc
     1201 ggtcaaagag gcggtttttc cgttcaataa atttcccggc gttgatactc tgttgggtcc
     1261 ggagatgaaa tctactggcg aggtcatggg tattgacgtt tcctttggct tggccttcgc
     1321 caaagcgcaa ctcggcggcg gcatgcgcct gccgaagagc ggcagggttt tcattagcgt
     1381 gcgcgacgaa gacaagaaac ccgtgacggc ggccgccgag aaacttcacc gggccggctt
     1441 ccaaatcgtg gcgacccgag gcaccgccgc ctattttgcc gcccggggga tccccgcgga
     1501 agtcgtcaac aaggtccagg aaggcagccc gcatatcgcg gatcagatca aaagcggcga
     1561 gatcgccatg gtgatcaata cgccgacgga tgctcattcc caggccgatt cttaccaact
     1621 gcggcgctgc gctctggatt accagattcc ctatttta
//
LOCUS       DATDHO010000664         1653 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_30814, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000664 DATDHO010000000
VERSION     DATDHO010000664.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1653)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1653
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30814"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            398..709
                     /locus_tag="VIY07_12760"
     CDS             398..709
                     /locus_tag="VIY07_12760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382660.1"
                     /translation="MTWLGKILLLLALAGCSSSGGLFSREEPKPEPLANQAPTGPQQA
                     TPNRGSLSPAASAAAPPGADESSGELMDCVTESCRINCSPKLAARFKPKWCARFKEPA
                     D"
     gene            complement(732..>1653)
                     /locus_tag="VIY07_12765"
     CDS             complement(732..>1653)
                     /locus_tag="VIY07_12765"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY6382661.1"
                     /translation="LMRGLVVLVLWLVGLTAASAEPCPGNPDALGTARVLRISPSDFR
                     RIGGMQYAQTLPLKDHEVVITFDDGPIPPYSNAVLDTLASQCVKATYFLVGEMAQAYP
                     SIVRRIYNAGHTVGTHSQNHPLRFQRLTTPAFERQIDRGIASVDAALGDPKALSPFFR
                     IPGLNRTNAVEAYLASKSLVTWSADVVGDDWKRIGAREIVRRTMRRLEEKGRGILLFH
                     DIHATTAAALPILLKELKERGYRVVQVVADGERPDSLPALPASADAGNRPAPQVASKK
                     SITKRRKPTVATLHEGEYNASFKGWRLYPF"
BASE COUNT          325 a          485 c          521 g          322 t
ORIGIN      
        1 tggatggcgc caggatattg aatctcgcct tctgctcatc ggtaagactc gaatagaagc
       61 tggcaagagc gggctgcacc agcttgatcg cgaccgacat cgcgtcgagc cgctgtccga
      121 ccgcgtcaaa tcgttccagc gagtctgcgg aatgtctttc gggcacgatg attgcagctg
      181 attggcagca gtaacgtaac cgagaatttt ctgtgatggt ccgccgccca acgcggatac
      241 caaggtacca tcagccttgg gtgacgcggc cccacgctca gccaagtcag catgattttg
      301 ccggccgcga gcgaaggtgg cgttcgtctt cctgttgtgc gagcatgcag tccgattaca
      361 acgtgtcgcg cgcgccacta tgcatgtaag gcgtcaaatg acatggttgg gtaagatcct
      421 gctgctcctc gctctcgccg ggtgctcatc gtccggtggc ttgttttctc gggaggagcc
      481 caagccggag cctcttgcaa accaggcccc aaccggtccg cagcaggcaa cgcccaacag
      541 gggcagtctc tctccggccg ccagtgccgc agcgcctccg ggggcagacg agagttctgg
      601 cgagctgatg gattgcgtga ccgaatcctg caggatcaat tgctcgccga agttggctgc
      661 gcgattcaag ccgaaatggt gcgcccgctt caaagagccg gctgactgag attcagccag
      721 cggggcggaa cctagaacgg atacaagcgc cagcctttga aggaggcgtt gtactcaccc
      781 tcatgcagag tcgcgaccgt cggcttgcga cgcttggtta tggatttctt gcttgcaact
      841 tgcggtgccg gtcggttgcc ggcatcggcc gatgcgggaa gggccgggag agagtcgggg
      901 cgctcgccgt ccgcgaccac ctgcaccaca cgatagccac gctccttgag ctccttgaga
      961 agaatcggca gggccgccgc tgtggtcgcg tgaatatcgt gaaatagcag aatgccccgg
     1021 cctttttcct ccagccgccg catcgtgcgg cgcacgatct cgcgcgcgcc gatgcgcttc
     1081 cagtcgtccc caacgacgtc ggcgctccag gtcaccagtg acttcgaggc gagataggcc
     1141 tcgacggcat tggttctatt gagccccggt atccggaaaa acggcgaaag cgctttgggg
     1201 tcgccgagcg ccgcatcgac agatgcaatg ccgcgatcga tctgccgctc gaatgcgggc
     1261 gtagtcagtc gctgaaatcg caaggggtga ttttgactat gcgtgccgac ggtgtgaccg
     1321 gcattgtaga tgcgccggac gatcgaggga taggcctgcg ccatctcgcc gaccaggaaa
     1381 taagtggcct ttacgcattg ggaagccagc gtgtcgagaa cagcgttgga gtagggcggt
     1441 atcggtccgt cgtcgaaagt gatcaccacc tcatgatctt tcagagggag cgtttgggcg
     1501 tattgcatgc cgccgatgcg gcggaaatcg ctggggctga ttctgagcac acgggctgtg
     1561 cccaaagcat cggggttgcc gggacaaggc tctgctgacg ccgcggtaag ccctaccagc
     1621 caaagcacta aaaccactaa accgcgcatc agg
//
LOCUS       DATDHO010000665         2603 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_30847, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000665 DATDHO010000000
VERSION     DATDHO010000665.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_30847"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(38..1117)
                     /locus_tag="VIY07_12770"
     CDS             complement(38..1117)
                     /locus_tag="VIY07_12770"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase family protein"
                     /protein_id="HEY6382662.1"
                     /translation="MWPDRRLLDLFKIEHPIVLAPMAGAVDADLAIAVAEGGGLGSLP
                     VAMLNEQQMRAQLEKFRAATRKPINVNFFVHKPPVPNNAREHAWRKRLKPYYLELGID
                     PGAPVPSSNRTPFDAGLCAAVEEIKPEVVSFHFGLPEPALLKRVKAAGCVVMSSATTV
                     AEARWLEQHGCDVIIAQGNEAGGHRGMFLTDNLATQVGTVALVPQVVDAVKVPVIATG
                     GISDARGIVAALALGASAVQVGSAFMHCPESIVLPPHRAALKSARDDGTVLTNLMTGR
                     PARGFFNRVMREIGPINSIAPEFPLAGGALAPLHAKAQAQGSGDFSSMWAGQAAALGR
                     ELPAREVTIKLAEEAQALMRRMASI"
     gene            1543..1923
                     /locus_tag="VIY07_12775"
     CDS             1543..1923
                     /locus_tag="VIY07_12775"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6382663.1"
                     /translation="MANSLPAAPGQAPRILIVEDQLEIALQMSETVRDLGYRVSGIAR
                     TSAQAHQELAKLNFDAVLLDINLDDQHETETADFLLKTGIPFAFVTGYDYVIEPRHEK
                     IPLLEKPFTTVQLNVLLEKLVGPG"
     gene            2095..2508
                     /locus_tag="VIY07_12780"
     CDS             2095..2508
                     /locus_tag="VIY07_12780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382664.1"
                     /translation="MCDYSLQHVTSRPAKVGDKLTTRDFGIGTRGFAAAEDAEVAVCV
                     LPGTELAFSSAVAVRDFRSFVAGWETLGHATAIFRQVNKDEPWKHHDALEFPDGRIVL
                     LTRLSEGQEATVLQLPARPTTTVEADVQKRIAYVG"
BASE COUNT          573 a          777 c          746 g          507 t
ORIGIN      
        1 gcggacataa accacatctt gcggctgata gaagacatta gatggaagcc attcgccgca
       61 tcagcgcctg cgcttcctcg gcgagcttaa tggttacctc gcgcgcggga agttctcgcc
      121 ctagtgcagc tgcttgtccc gcccacatgg aggaaaaatc accggagccc tgcgcctgtg
      181 ccttcgcgtg cagcggcgcc agcgcgccgc cagcgagcgg aaactctggc gcgatcgaat
      241 tgatcggccc gatctcccgc atcacacggt tgaagaaacc gcgcgccggc ctaccggtca
      301 ttagattggt cagcaccgtg ccatcgtcac gcgcggattt gagtgccgcg cgatgtggcg
      361 gcaacacaat cgattccgga caatgcataa aggcgctgcc gacctgcacg gcggaagcgc
      421 cgagcgccag cgccgccacg atcccgcgcg cgtccgatat gccaccggtg gcgatcacgg
      481 gcaccttcac cgcgtccaca acctgcggca ccagcgcaac ggtgccgact tgggttgcca
      541 aattatcggt caagaacatg ccgcgatgac cccccgcttc attgccctgc gcgatgatca
      601 cgtcacagcc gtgttgctcc agccaacgcg cctcggcaac ggtggtcgct gagctcatca
      661 ctacgcagcc cgcggctttg acgcgtttaa gcagagccgg ctcgggcaag ccgaaatgga
      721 agctcaccac ttctggcttg atctcttcaa ctgcggcgca tagccccgcg tcgaacggcg
      781 tccggttgct cgagggcacg ggcgcccctg gatcgatacc gagctcgagg taatagggct
      841 tgagccgctt gcgccaggca tgctcgcgcg cattgttggg caccggtggc ttgtgcacga
      901 aaaaattcac gttgatcggc ttgcgcgtcg cggcgcggaa tttttccaac tgcgcccgca
      961 tctgctgctc gttgagcatc gcaaccggca atgacccgag cccgccccct tccgccacgg
     1021 cgatcgcgag atcagcgtcc accgcgccgg ccatcggcgc cagcacgatc ggatgttcga
     1081 tcttgaacag gtcgagtaac cgtcgatcag gccacatcgg cattctcccg gcatggacgc
     1141 ctgcaacaca gcagactaac gcaagaattc cgagaactta tcgccgcgcg cctaattaaa
     1201 acatcgctca aactagcaca ccgaaagggg accgacgtca gggtgggtcc aaatcgcttt
     1261 accgccatcg ttgttcgctt tgggtcataa gcggacatag cggtacgcca gcgtcatgtc
     1321 cactttacac ccgaaagcgg acattgggtg gcgcatccac gtcggaattt ggctgccggt
     1381 ttatgaggcc acagtgtcta tacgattgcc ctatgcagca ttgctcttgc caactcagcc
     1441 gtgccgaatg agacgtactg agttaagcgt ttgtcacgtt tcggccactg actgcgggta
     1501 cgtgcgctag tgatcatcga ctacgtcaca tcacgagttc caatggccaa ctcactacca
     1561 gccgctcctg gacaggctcc acgtatcctc atcgtggaag accagcttga gattgcgctg
     1621 cagatgagtg aaacggtccg agaccttggt tacagggttt ccggaatcgc tcgcaccagc
     1681 gctcaggcgc accaggagct tgccaagctc aacttcgatg ccgtgcttct agacatcaac
     1741 ctcgatgacc aacacgaaac ggaaacggct gactttctgc taaagaccgg cattccgttc
     1801 gccttcgtaa cgggctacga ctatgttatc gaacctcgtc acgagaaaat accgttgctg
     1861 gagaagccgt tcacgacggt tcagcttaac gtcctcttgg agaaactagt agggccggga
     1921 taaacagcaa gccatgggaa ttttttgaat ttgcatagtg gaagaagtgg agagagaacg
     1981 aaaaatttgg gcgacatccc cattgggagc gggctaagat tttgtgatgc gggaggacgc
     2041 aagtgcgcta atgtctcacg gagctgaggg gcttccaaca agggagttcc agagatgtgt
     2101 gactacagcc ttcaacacgt cacgtcgcgg cctgcaaagg tcggcgacaa actcaccaca
     2161 cgtgacttcg ggatcgggac acgcggattc gccgcggcgg aagatgctga agtggcggta
     2221 tgcgttcttc caggaactga gcttgcgttt tccagcgcgg tagcagttag agatttccgc
     2281 agcttcgtcg caggttggga aacactaggt cacgcgacgg caatcttccg acaggtgaat
     2341 aaggacgaac cgtggaagca ccatgatgcg ctcgaatttc cggatgggcg cattgttctc
     2401 ctgacgcgac taagtgaggg ccaggaggca acggtacttc agcttccggc gcggccaacg
     2461 accacggtcg aagcggatgt tcagaaacgc atcgcctacg taggctgatg tccgccttcg
     2521 gtccagagcg gacgtttcaa tctgtcagac ggacggagca acgcgacaaa caatagcggc
     2581 ttgctcccag agaatgacta tga
//
LOCUS       DATDHO010000666         5271 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_328943, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000666 DATDHO010000000
VERSION     DATDHO010000666.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5271
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_328943"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..885)
                     /locus_tag="VIY07_12785"
     CDS             complement(142..885)
                     /locus_tag="VIY07_12785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382665.1"
                     /translation="MTAAVEINNLAKVFGGLRAVDGVSLHVAPGERRALIGPNGAGKT
                     TLFHCVTGTLQASSGSVSLFGNDVTYLPEYQRTKLGMGRTFQITNVFTDLSLTENVAL
                     AIVGTDRRKWICGRPLGSFPDIRAQALARLDAVGLKQHPDKPVKLLSYGERRQLELAL
                     ALSTNPKVLFLDEPCAGLSPSERLKIFNMIRALPREITVVMIEHDMDVALGLADRVTV
                     MNRGRVMAEGTPAEVQSNIEVRNVYFGQA"
     gene            complement(882..1826)
                     /locus_tag="VIY07_12790"
     CDS             complement(882..1826)
                     /locus_tag="VIY07_12790"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382666.1"
                     /translation="MNSYRIILVLTALVAALIAPLVAGQYWMSLITQIYIYGLLALSV
                     DLLLGHAGLYSLCQASFFAVAAYTTAILQVRYGYPTILAAPAGLAAGTLLAGLYGCAV
                     RTRGVYFILITIALGYIIWGAFYRWASFTGGDNGITNVPPPTVSGLSIASQTAYYYFV
                     LGVVILCAFGYRILTRSPFGLSLRGIKGSESRMQSLGYRTTMHLYVAFVISGAIASLA
                     GVLYVYYNRFINPVAASFQISVEVSLMAIVGGSGTIVGPFIGAGIFLGLRNWVSSFFE
                     MHTAVMGIVFIATVLWAPSGIVGFIERWRTGGRMKDQQ"
     gene            complement(1829..2689)
                     /locus_tag="VIY07_12795"
     CDS             complement(1829..2689)
                     /locus_tag="VIY07_12795"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382667.1"
                     /translation="MHSSILQAINGISFAALLFLLASGFTITFGLMRVVNMAHGAYYL
                     VGGYIGLTITRYTGSFALGVLGGGLAVIPLGYLIDRFLVSRTGENHLAQVLLTVGIAF
                     VLGDVALHIWGGDNLKVPTPIELRGAIELPGGIIYPTYRLLLILFGIVVGLSLWLLYR
                     KTQIGAVVRAGVDDREIVSAIGINIDWLFVLVSALASFLAGIAGVVGGAFLTLYPGAE
                     WEILVYALVVVIFGGLGSLEGAMIGALIVGLLDAYGRWLLPEFSYFVLFGPMAILLLF
                     RPRGIFGREG"
     gene            complement(2771..4009)
                     /locus_tag="VIY07_12800"
     CDS             complement(2771..4009)
                     /locus_tag="VIY07_12800"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HEY6382668.1"
                     /translation="MSTLLRNLICVTGASLLAAVLGAASAFAQQTGPIKIGLLVPLTG
                     PLATPGTDMVDGFKLFWEQVGNTAGGRKVEYVIADTTCNPDQAITQARRLVHQEKVQI
                     MIGPLCGHEGPAVAQVSKETGIPLVMDTAGADDVTKWNRTPTVVRTAVSASQIGHPFG
                     DYLFKELGARNVTFIGQDYTWGHEVTLGIVQTYKELGGKVAKIIWNPIGTKDYGPTVA
                     AIAPDSDAVVAVVVGADRIRLFEAWFSFGMDKKFKIYGGYWMHQDALPQMDDRAVGMI
                     GNSLHYATGLDTPDNKAFVDAFAKKYKRLPSWFAESAYTASLWSRTAIEAVKGNVEDK
                     DAFLKAMRTATIKAPRGTLKMDEYDNPIQNVYVTRIQKINHPAIGSVLINVPIKTYEN
                     VSQFWTWTPEEFLKRGPYKR"
     gene            4227..>5271
                     /locus_tag="VIY07_12805"
     CDS             4227..>5271
                     /locus_tag="VIY07_12805"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6382669.1"
                     /translation="MSAQRSATQDANGPDFRFGSERDAIRSEDAPLVTGRGKFTDDLD
                     MTGKMHAAFVRATVAHAIIREVDVADAIKMPGVVAIITGSDLAADNIGGIPPVASFNG
                     RDGNPMFHATMPVLAAERVRYVGEAIAIVIAETAYQAQDAAEAVVVQFDQLAAAPDVE
                     RAMAKDAPAIWPDAPENIALDWEFGDAAAVDAAFARAAHIERVRLIDTRIAPSAMEPR
                     AAIASFDMQSQRYTLIAPTQGVAVVRKVLAENVFNVPLSQVRILTHDVGGGFGMKVQI
                     YSEYAALLCAARRVGRPVKWCASRLESFLTDTHGRDGLLEGELALDVAGKFLGLRVRT
                     FVGIGAYTSTYAAI"
BASE COUNT         1077 a         1544 c         1669 g          981 t
ORIGIN      
        1 gtcttgccca tgccattgcg accgaggatg gcggcaatct gccccttgcg tagcgtgagg
       61 ctgacaccct gcaggacgta gctgtcaccg tagtaggtgt ggatctcgga gaccgtgagc
      121 agggggttgg acatggtcgg gctaggcctg gccgaaatac acgttccgga cttcaatatt
      181 ggattgaacc tcggcgggcg ttccttccgc catgacccgt ccgcggttca tgacggtgac
      241 gcggtcggcc aaaccgagcg ccacgtccat gtcgtgttcg atcatcacaa ctgtgatttc
      301 gcgcggaagc gcgcgtatca tgttgaagat cttcagccgc tcgctgggcg agagcccggc
      361 gcaaggctcg tcgaggaaca gcaccttcgg attggtgctg agcgcaagcg ccagctcgag
      421 ctggcggcgc tcgccgtagg agagaagctt tacgggcttg tcggggtgct gcttcagtcc
      481 gaccgcatca agccttgcga gagcctgcgc gcgaatatca ggaaatgaac cgagtggccg
      541 gccacagatc cactttcgcc ggtccgtgcc gacgatagcc agcgcaacgt tctcggtgag
      601 ggatagatcg gtaaaaacgt tggttatctg aaatgtgcgg cccatgccga gcttggtgcg
      661 ctggtactcc ggcagatagg tcacgtcgtt gccgaacagg ctcaccgacc cggaggatgc
      721 ttgaagcgtg ccggtaacac aatgaaacag cgtggtctta ccggcgccgt tcggcccaat
      781 aagcgcacgc cgctcgccgg gcgccacgtg cagcgaaact ccatccacgg cacgtaatcc
      841 gccgaacacc ttggccaggt tgttgatctc gacggcagcc gtcattgctg gtctttcatc
      901 ctgccgccgg tgcgccagcg ctcgataaag cccacaatgc cgctaggcgc ccagagtacg
      961 gttgcaatga acacgatgcc catcaccgcc gtatgcattt cgaagaagct gctgacccag
     1021 ttgcgcagcc caaggaagat tcccgccccg atgaaagggc cgacaatcgt gcccgaaccg
     1081 ccgacgatcg ccatgagaga gacctcgacc gaaatttgga acgaggctgc gactgggttg
     1141 atgaagcggt tgtagtagac gtagagcacg cccgcgaggc tcgcgattgc ccccgaaatg
     1201 acgaacgcca catagagatg catggtggtg cggtagccga ggctctgcat gcggctctcg
     1261 cttcctttga tgcctcgcag tgagaggccg aatggggatc gcgtgagaat gcgataaccg
     1321 aacgcgcaaa ggatcacgac accgaggacg aagtaatagt aagcggtctg cgaggcgatg
     1381 ctcaggcccg aaaccgtcgg cggcggcaca ttggtgatgc cattgtcgcc gccggtgaac
     1441 gacgcccagc ggtagaatgc gccccagatg atgtatccga gcgcgatcgt gatcaggatg
     1501 aaatacacac cgcgcgtgcg cactgcgcaa ccgtagaggc ccgcgagaag cgttccggcg
     1561 gccagtcccg ccggcgccgc taggatcgtt ggatacccgt agcgaacctg aaggatggcc
     1621 gtggtgtaag cggccacggc gaaaaacgac gcctggcaaa gcgagtagag accagcgtgc
     1681 ccaagcagaa gatcgaccga cagcgcaagc aggccgtaaa tgtagatttg ggtaatcaga
     1741 ctcatccagt actggccggc gacgagcggc gcgattagcg cggcgacgag cgcggtcaag
     1801 acaagtatga tccggtacga gttcacgctc agccttctct gccgaagatg ccgcgcggtc
     1861 ggaacagcag caggattgcc atcgggccga acagcacgaa ataggagaac tccggcagca
     1921 gccagcggcc ataggcgtcg agcaggccga caatcagcgc gccgatcatc gcgccttcca
     1981 gacttccaag gccgccaaag attacgacca cgagcgcata gaccaggatt tcccattctg
     2041 cgcccggata gagcgtaagg aacgccccgc ctacgactcc ggctatgccg gcgaggaacg
     2101 aggcgagggc ggaaacgaga acgaagagcc agtcgatatt gatgccgatc gcactcacga
     2161 tttcacggtc gtcgacgccg gcgcgaacga ccgcaccaat ctgagttttg cggtagagca
     2221 gccaaagcga caggccgacc acgataccga ataggataag caggaggcgg taggtcggat
     2281 agatgatccc gcccggcaac tcgattgcgc cacgaagttc gatcggtgtc ggcaccttga
     2341 ggttgtcgcc gccccaaatg tgcagcgcca cgtcgcccaa cacgaacgcg atgcccaccg
     2401 tgagcagcac ttgcgccagg tggttttctc cggttcggct aacgaggaag cgatcgatca
     2461 gatagccgag cgggatgaca gcgagtccgc cgccgagcac gccaagcgcg aagcttccgg
     2521 tgtagcgggt gatcgttagt ccgatgtagc ccccgacaag ataataggcg ccgtgcgcca
     2581 tgttcacgac gcgcatcaac ccaaaggtga tcgtgaaacc gctggcgagc agaaacagga
     2641 gcgcggcgaa ggaaatgccg ttgatcgcct gaaggatgct gctgtgcata agacgctgga
     2701 cattgctatg gcggccgcgc acgcggccgg cggttgccgc gaagcgccct cggtaatcga
     2761 cgcaggagga ttaccgcttg tacggcccgc gctttaggaa ctcctccggc gtccaggtcc
     2821 agaactgcga cacgttctca taggtcttga tcggaacgtt gatcagtacc gatccaatcg
     2881 cgggatgatt gatcttctgg atgcgcgtca cgtagacgtt ttggattggg ttgtcgtatt
     2941 cgtccatctt gagcgtgccg cgcggggcct tgatcgttgc agtgcgcatc gctttgagga
     3001 aagcgtcctt gtcctcaacg ttgcccttga ccgcctctat cgcggtgcgc gaccaaaggc
     3061 tcgcagtgta ggcggactcg gcgaaccatg atggcagcct cttgtatttc ttggcgaacg
     3121 cgtcgacgaa cgccttgtta tccggtgtgt cgagaccggt ggcataatgc agcgagttgc
     3181 cgatcatgcc gacagcgcgg tcgtccatct gcggcagcgc gtcctggtgc atccagtaac
     3241 cgccgtagat tttgaacttc ttgtccatgc cgaagctgaa ccaagcctcg aacaggcgga
     3301 tgcggtcggc gccgacgacg actgcgacaa cggcgtcgga atccggcgcg atcgcggcga
     3361 cggtcgggcc gtagtccttg gtcccgatcg ggttccagat gatcttcgct accttgccac
     3421 caagttcctt ataggtttgc acgatgccaa gcgtcacttc gtggccccag gtatagtcct
     3481 ggccgatgaa tgtgacgttg cgtgcgccga gctctttgaa gagatagtcg ccgaagggat
     3541 gcccgatctg gctggcggac accgcagtgc gaaccacggt cggcgtgcga ttccactttg
     3601 tcacgtcgtc ggcgccggcg gtatccatca ccagcggaat gccggtttcc ttgctgactt
     3661 gcgccacggc cgggccttcg tgcccacaga gcgggccgat catgatttgc accttctcct
     3721 gatggaccag gcggcgcgct tgagtgatgg cttggtcagg attgcaagtt gtatctgcga
     3781 tcacgtactc aaccttgcgt ccgccggctg tgttgccgac ctgctcccag aacagcttga
     3841 agccgtcgac catgtctgtg cccggtgtcg cgagcgggcc ggtcagtggc accagcagac
     3901 caatcttgat tggcccggtt tgctgcgcaa acgccgatgc cgcaccaagc acggcggcga
     3961 gtaacgatgc gccagtcaca caaatcaaat tccgaagcaa ggtgctcatg gaacccccca
     4021 tgtctttatc tttattgtgc cagcacgcgc tgtggcggtt gcgctgcaag attagtctaa
     4081 tgctagcacg tgcccggagg ggtgccaatt ggaccgctcg acgcggattg gttgcaaagt
     4141 gtcgttttcg atgggtggac tgcggatttt gcgtatgctg gcgtccggcg tgtgattgac
     4201 atcgcgtgaa acgaacagag gcatccatga gtgcgcaacg aagcgcaacg caagacgcca
     4261 acggccctga tttccgcttt ggcagcgaac gcgacgcgat tcgcagcgag gacgcacccc
     4321 tggtcaccgg ccgaggaaaa ttcactgacg atttggacat gaccggcaaa atgcacgcgg
     4381 cgttcgtgcg cgctacagtt gcgcatgcga ttatccgtga agtggacgtt gcagacgcta
     4441 taaagatgcc cggcgtcgtc gccataatta cgggcagcga tctcgcggcg gacaacatcg
     4501 gcggtattcc gccggtcgct tccttcaacg gccgcgacgg taacccgatg tttcacgcca
     4561 cgatgcccgt gctcgccgcg gagcgcgtgc gctatgtggg ggaggccatc gcgatcgtga
     4621 tcgccgagac ggcgtatcaa gcgcaggacg cggccgaagc ggtcgttgtg caattcgatc
     4681 aactggccgc cgcgccggac gtcgagcgcg ctatggcgaa ggatgcgccg gcgatatggc
     4741 ctgacgcgcc ggaaaacatc gcgctcgact gggaatttgg tgacgccgcg gccgtcgacg
     4801 ccgcgtttgc ccgtgctgcg catattgagc gggtgaggct gatcgatacg cgtatcgcgc
     4861 cgagcgcaat ggagccgcgg gcagcgatcg cgagtttcga tatgcagtct cagcgttata
     4921 cgctgatcgc gccgacgcag ggcgtggccg tggtaagaaa ggttctcgcg gaaaacgtct
     4981 tcaatgtgcc tctcagccag gttcgcatcc tgacgcacga tgtgggcggc ggctttggaa
     5041 tgaaggtgca gatctattcc gaatatgccg ccctgctgtg cgcagcacgc cgcgtcgggc
     5101 gaccggtgaa gtggtgcgcc agccggctgg agagctttct cacggacacc catggacgtg
     5161 acgggctgct ggagggtgaa ctcgcactcg atgtcgccgg aaaatttctc ggcttgcggg
     5221 tgcgtacgtt tgtcggcatc ggcgcctaca catcaacata cgccgcgatc a
//
LOCUS       DATDHO010000667         7160 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_378153, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000667 DATDHO010000000
VERSION     DATDHO010000667.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7160
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378153"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(50..310)
                     /gene="hfq"
                     /locus_tag="VIY07_12810"
     CDS             complement(50..310)
                     /gene="hfq"
                     /locus_tag="VIY07_12810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEY6382670.1"
                     /translation="MAADRAQNLQDTFLNHVRKSKIPLTIFLVNGVKLQGVVTWFDNF
                     CVLLRRDGHSQLVYKHAISTIMPGHPIQLFEGADEPPAGDKP"
     gene            complement(563..1423)
                     /locus_tag="VIY07_12815"
     CDS             complement(563..1423)
                     /locus_tag="VIY07_12815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HEY6382671.1"
                     /translation="MSRIAYVNGRYLPRNEAKVPVEDRGYQFADGVYEVCEVRGGRLV
                     DERRHMARLDRSLGELRIARPMPQAALAVVLRETIRRNRVRDGIVYVQVTRGVARRDF
                     PFPSPGTRPSLVVTARSSPIEQLEDVAAQGVAVVTVPDIRWKRVDIKSVSLLPNVLAK
                     QAAREQGAREAWLVDAQGRVTEGASSNAWIVSRDGKLITHPIGQDILSGITRAVVIDA
                     IKAQGLPFEERSFSVEEAYSAREAFITSASQTVLPVVTINGRPVGNGAPGLIATGLRR
                     DYHRYAEISE"
     gene            complement(1427..2797)
                     /locus_tag="VIY07_12820"
     CDS             complement(1427..2797)
                     /locus_tag="VIY07_12820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54 dependent transcriptional regulator"
                     /protein_id="HEY6382672.1"
                     /translation="MAGEILIVDDEADIRDLVAGILQDEGYSTRTARNSDDALSAIAT
                     RRPNLVFLDIWLQGSKLDGLQLLDTVKQEQPDLPVVMISGHGNIETAVAAIKHGAYDF
                     IEKPFKADRLVLVADRALENSRLKREVKQLKQLSPQPSTLIGRSASIGQLRQAIERVA
                     PTNSRVLVVGPSGAGKELAARTMHQLSARVNGPFAVINAAAITPERMEIELFGVDQSN
                     GSEGRKPGALEEAHGGTLFIDDIADLPRETQNKILRVLVDQTFQRVGGSTKIAVDVRI
                     VSSTSRNLEALITEGKFREDLYHRLAVVPIRVPPLAERREDIPDLVDYFMDQISAATG
                     LPKRRIGEDAMAVLQSHNWPGNVRQLRNNIERLMILAGGDPEAVMNASMLPPDVGSMV
                     PSMPNGNGGEHLMGLPLRDAREVFEREYLVAQISRFGGNISRTAEFVGMERSALHRKL
                     KALGID"
     gene            complement(2801..5044)
                     /locus_tag="VIY07_12825"
     CDS             complement(2801..5044)
                     /locus_tag="VIY07_12825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEY6382673.1"
                     /translation="MSVEQAATAETALAGAPAKRGESWIVGPLVVGLALFSAFVTFVV
                     LADLTPVSPTHNVVVTLLLVNAATVLLLLGIIVREVWQVVQARRSGRAGSRLHVRIVG
                     LFSIIAAAPAIMVAIVASVTLDRGLDRLFSTRTRSAIENSLIVAEAYLRDNAQIVRSD
                     IMVIAFDIARTKAVFEQDPDKLRQFLTFQASVRGLGAAIVLDKDLNVVARANVNISQT
                     FALPPRDALAHISEKEPQIVLLPDANYVAAVIKLDQFDSHYLYITRLLDPRVVPQLQA
                     TRASVTEYAALEARRLGVQVAFALMYTVIALIVLLSAVWIGFNFANRLVAPIRRLIGA
                     ANAVSTGNLYVRVPVRQAEGDLAHLGETFNRMTQELRTQRDDIMNARDLIDSRRRFTE
                     AVLAGASAGVIGVGSEGNVSILNRSAEKLIGRAESEALGQPLIDVLPELADTMAAVQS
                     GAPVQNQITISRNGRERNLSVRVTSEQSTDSDRGYVVTLDDITELVSAQRTSAWADVA
                     RRIAHEIKNPLTPIQLSAERLRRKYGKMIGEDRTVFEQCTDTIVRQVDDIRRMVDEFS
                     HFARMPKPVVAAEDVADVIRQTVFLMRVGNSEIDINVDIKEDPMPARFDRRLISQALT
                     NIIKNATEAISAVPTNELGKGVIKVYAEREGGDIVIDVVDNGVGLPKENRSRLLEPYV
                     TTREKGTGLGLAIVGRIVEEHGGVIELRDAAEKSPGQRGAWVRVRFAASGKTEIAESE
                     KPKVASE"
     gene            complement(5683..6240)
                     /locus_tag="VIY07_12830"
     CDS             complement(5683..6240)
                     /locus_tag="VIY07_12830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEY6382674.1"
                     /translation="MNALSRIEGYAIVSDNGMIATAKGTMPRALKFDADQEFFERGLN
                     GVDVVVHGRHSRERHRRSDMRRRLILTRRISSIASDANNGNALFWNPTGATLEEVLTV
                     LGAPNGSIGVIGGTDVFGLFLDRYDTFFLTRAPGVQIPGGRPVFPEVPALSPDEVLAK
                     HGLTNASHRLLDAKHELELVTWSRP"
     gene            complement(6283..6912)
                     /locus_tag="VIY07_12835"
     CDS             complement(6283..6912)
                     /locus_tag="VIY07_12835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6382675.1"
                     /translation="MKSDVAIMYAVETIKSGLEHLTGIAQPTARELRKRIKKRKPRAT
                     VFKDNNHIPNNPTLPFIHYCNVISLIGAVDPAAVFERVFKGNDWIGSWRNGIYDYVHY
                     HPRTHEVLGIARGRARVRFGGKRGKLFHLKPGDVVILPAGTGHEAIRATKDLLVVGAY
                     PASGKYDEYTGRRDEHTKAVRTIPKVRLPSKDPVFGRKGPLKKLWKSAR"
     gene            complement(6902..>7160)
                     /locus_tag="VIY07_12840"
     CDS             complement(6902..>7160)
                     /locus_tag="VIY07_12840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382676.1"
                     /translation="DIVCFDADRRRDLREWLASPLDEAAPVTTRQGKTVELTWAETAN
                     RLDDEAHGNRDTKQVAEIACEKDQVQMLIPVKHPAQKANEE"
BASE COUNT         1456 a         2144 c         2044 g         1516 t
ORIGIN      
        1 cggtcgggct cagacgatcg gtacgctggt cgcgacgtcg tacttccaac tagggtttat
       61 ctccggccgg cggctcgtcg gccccttcga agagctggat cgggtgacca ggcatgatgg
      121 tcgaaatcgc atgcttgtag acgagctggg aatgtccatc tcgtcgcaac agcacacaga
      181 agttatcgaa ccaggtcacg acgccctgca acttgacacc gttcaccaga aaaattgtga
      241 gcggtatttt acttttgcgg acgtgattga gaaatgtgtc ttgcaggttt tgcgcacgat
      301 cggcggccat ggccgttttt ccatttttgc tcgcgtctag cgcgcgagac gttctttgcc
      361 caagtccttc cgcatgcgtt gagaacatgc gccgctttgc ccctcgcaaa gcggtctggg
      421 gccccgggag tggcactatt agatgttagc tacctttccg gcgcaagcag aagttggcgt
      481 gcgcgcgcct aactcgcaga aattaaacga ttttgtctgt tttggccgga ttcaaggttt
      541 ggcaaaaatc gcgtcgaaac agctattcgc tgatctcggc atagcgatgg tagtcgcgcc
      601 gcaggccggt cgcgatcagt ccgggggcgc cattgccgac cggccggccg ttgatggtga
      661 ccaccggcaa cacagtctgg ctggccgatg taatgaaggc ctcgcgggcg gaataggctt
      721 cctcgaccga gaaggagcgc tcctcaaagg gcaggccttg cgccttgatc gcgtcgatca
      781 caaccgcgcg cgtgatcccg gacaggatgt cctgaccgat cggatgggtt atcagcttgc
      841 catcgcggct cacgatccag gcattcgatg aagcgccctc cgtaacacgc ccttgcgcgt
      901 cgacaagcca ggcctcgcgt gcgccctgct cacgggcggc ctgtttcgcc aaaacgttcg
      961 gcaataacga cacagatttt atgtccacgc gtttccagcg gatgtcaggc acggtgacaa
     1021 ctgctacccc ctgtgctgca acatcctcga gctgctcgat agggctgctg cgcgcggtca
     1081 caaccaggga cggacgtgta cctggggatg ggaacgggaa atcccggcgc gccacgccac
     1141 gcgtgacctg cacgtacaca atgccatcgc gtacccggtt tcgacgaatt gtttcgcgca
     1201 gcacaaccgc cagtgcggct tgcggcatcg gacgcgcaat tcgcagttcg ccaagcgagc
     1261 ggtcgagacg cgccatatga cgtcgttcgt cgaccagacg ccctcccctc acctcgcaga
     1321 cttcatagac tccgtcggca aactgatagc cccggtcctc gacaggaacc ttggcttcgt
     1381 tcctcggcaa gtagcggccg ttgacgtagg caatccggga catcggctaa tcgattccga
     1441 gcgccttgag cttgcggtgc aaagctgacc gctccatgcc aacgaattcg gcggtccgcg
     1501 atatgttgcc gccaaagcgg ctgatctgcg caaccagata ttcgcgctcg aatacttcgc
     1561 gcgcgtcgcg cagcggcaag cccatcaaat gctcgccccc attgccgttc ggcatgctcg
     1621 gcaccatcga gccgacatcc ggcggcagca tgctcgcgtt catcacggcc tcaggatcgc
     1681 cccccgccag tatcatcagt cgttcgatgt tgttgcgcag ctgcctcaca ttcccgggcc
     1741 aattgtggga ctgcagcacc gccatggcgt cctcgccaat acgccgcttc ggcaggcctg
     1801 tcgccgccga aatctgatcc ataaagtagt cgacaagatc gggaatatcc tcgcgccgct
     1861 ccgcaagcgg gggcacgcga atcggcacaa ccgcaagccg gtggtacaga tcctcacgga
     1921 atttcccttc cgtgatgagc gcctcgagat tgcgcgaggt cgacgagacg atccgcacgt
     1981 cgaccgcaat cttggtgctc cccccgacgc gctgaaaggt ctggtccacg agcacgcgca
     2041 ggatcttgtt ttgcgtctct cgcggcaggt cagcgatgtc gtcgatgaag agcgtgccgc
     2101 catgcgcctc ctcgagagct cccggcttgc gcccctccga gccgttggat tgatcaacgc
     2161 cgaatagctc gatttccatt cgctccggag taatcgccgc cgcgttgatc acggcaaaag
     2221 gaccgtttac gcgggccgac agctggtgca ttgttcgcgc ggcgagctct ttgcctgccc
     2281 cggatgggcc tacgacaagc acgcggctat tggtcggggc gacgcgttcg atagcctggc
     2341 gcagttgtcc gatcgaggcc gaacggccaa tgagcgtcga gggctgcggc gagagctgct
     2401 tgagttgctt gacctcacgc ttaaggcgag agttctcaag cgcgcggtcg gcgaccagaa
     2461 caagccgatc agccttgaac ggcttctcga tgaaatcgta tgcgccgtgt ttgatagccg
     2521 ccaccgccgt ttcgatgttg ccgtggcccg aaatcatgac aaccggaaga tcgggctgtt
     2581 cctgcttgac ggtgtcaagt agctgcagcc cgtcaagttt gctgccctgc agccatatat
     2641 cgagaaacac aaggttcggc ctacgcgtcg cgatcgcgga gagcgcatcg tcgctgttgc
     2701 gcgcggtgcg cgtgctgtag ccctcgtcct ggaggatgcc ggccaccaga tcgcggatat
     2761 cggcctcgtc gtcgacaatt agaatttcac cagccatctg ttactcgctt gcgacctttg
     2821 gcttttcgga ttctgcgatt tcagtcttac cggaagcagc gaaccgtacg cgcacccagg
     2881 caccgcgttg cccaggactt ttctcggcgg cgtcgcgcaa ctcgatcacg ccgccgtgtt
     2941 cctcgacgat gcgccccacg atcgcaaggc caagaccggt acctttttcg cgggtcgtga
     3001 catagggctc gagcagccgg cttcgatttt ccttcggcag gccaacaccg ttgtccacga
     3061 catcgatgac aatgtcgccc ccttcacgct cagcgtagac cttgattacg ccttttccga
     3121 gctcgtttgt cggtacggcg gaaatcgctt cggtcgcgtt cttgatgata ttggtcagcg
     3181 cctgcgaaat cagccgccgg tcgaaacgcg ccggcatggg gtcttccttg atatcgacgt
     3241 tgatgtcgat ttccgaatta ccgacgcgca tcaggaaaac agtctgccgg atcacatccg
     3301 ccacgtcttc agccgcaacg acaggcttcg gcatgcgcgc gaagtgcgag aactcgtcaa
     3361 ccatccgcct aatgtcgtca acctggcgaa caatcgtgtc ggtgcactgt tcgaacaccg
     3421 tgcgatcttc gccgatcatt tttccgtatt tgcgccgcag ccgctctgcc gagagctgga
     3481 tcggcgtgag cggattcttg atttcatggg caatccggcg tgcgacgtca gcccatgccg
     3541 atgtacgctg cgcagaaacg agttcggtaa tgtcgtcgag cgtcacgacg tacccgcgat
     3601 ccgagtcggt ggattgttca ctggtgacgc gaaccgacaa gttacgttcg cggccgttgc
     3661 ggctgatggt gatttgattt tgcaccggcg cgcccgattg aaccgccgcc atggtgtccg
     3721 caagttcggg cagcacgtcg atcagaggtt gacccagtgc ctcgctttcg gcgcggccga
     3781 tcagcttttc cgcagaccgg ttcagaatgc tgacattgcc ctcgctacca acgccaatga
     3841 cacctgcgct ggcgccggcc agaacggcct cggtgaagcg ccggcggctg tcgatgagat
     3901 cgcgcgcgtt catgatgtca tcgcgctgcg tgcgtaactc ctgggtcatg cgattgaatg
     3961 tctcgccgag atgagcgaga tcgccttcag cctgacgaac cggaacccgc acgtaaagat
     4021 tgccggtcga gactgcgttg gcggcgccta tcaggcgccg gatcggcgct accagccggt
     4081 tggcaaaatt gaaaccgatc cagaccgctg aaagcagcac gatcagtgcg atcaccgtat
     4141 acatcagcgc aaaggccacc tggacgccga gccgtcgcgc ttcgagcgcg gcgtactcgg
     4201 tgacgcttgc gcgtgtcgcc tgcaattgcg gcacgacgcg aggatctagc aggcgcgtta
     4261 tgtaaagata atggctgtcg aactggtcaa gcttgatgac tgcggcgacg taattggcgt
     4321 ccggcagcaa gacgatttgc ggctccttct cactgatgtg ggccaatgca tcgcgcggcg
     4381 gcaatgcgaa tgtctgactg atgttgacgt tggcgcgagc cacgacattg aggtccttgt
     4441 cgagcacgat ggcagcgcca agccccctca ccgaggcctg gaatgtgaga aactgacgca
     4501 gtttgtcggg atcctgctcg aaaacagctt tggtccgcgc gatatcgaac gctatgacca
     4561 tgatgtcgga gcgcacaatc tgcgcgttgt ctcgtaaata ggcctccgcg acgataagag
     4621 agttctcgat cgcggaccgc gtgcgtgtcg agaacaggcg atcaaggcca cgatcgagcg
     4681 tgacgctcgc aacgatcgcc accatgattg ccggagcggc ggcgataatc gaaaaaagcc
     4741 cgacgatgcg cacgtgcagt cgagaaccgg cgcggccgct gcgtcgcgcc tgcaccactt
     4801 gccagacctc gcgcacgatg atgccaagca acagcagcac cgtcgcagcg ttcaccagca
     4861 gcagcgttac gacgacattg tgggtcggcg aaacaggcgt gagatcggcg aggactacga
     4921 aggtgacgaa ggcggagaat aaggccagcc cgacgacgag cggtccgaca atccaggact
     4981 cacccctttt tgcgggagcg ccggcaagtg ccgtttcggc ggtggcggcc tgttcgacgc
     5041 tcatagcccc ctgcgcagaa actcggaaag cgaccaccca ctgacgcgcc ggccaaaagg
     5101 ctcgggccct ccccgatatt ggtgctttta tacaacaatg ttgccgaatt gagacaaaag
     5161 ctagccctta aagccttaat caggaaaaaa tgggatgcat tttcaagcgc atcccgcgtg
     5221 ccgagccaga gagcagctgg aacaattcgc ctgggcgtgg gtttcttcga cgctactggc
     5281 ccctcccctt cccccgaaga gccagtagca tcttggcaag ggctgccccc gggcagccct
     5341 tattctttaa acaaaagcag ccccgcgaca tctgaggctg ccggcaacag atacgccaag
     5401 ctcgcggttg tgttggttcg tgcgttttga atccgccatg aggttttgat gcaaacgata
     5461 aacgaacgtg aagcccatct ccgcgtgctc gccgatcaat tatttttcgt cgtcgaaaaa
     5521 actggacacc gcttcacatt gaaacgcacg accgacgtgt caaagcccgt gtgcgaagaa
     5581 ggcctcacac tagcagaggc cgaacagtta ctacaaaggt ggaaacttcg cggctttcac
     5641 ggtggctgag tccccagcga acgttcgcaa aacgaagtta tcctaaggac gggaccaggt
     5701 cacaagctct agctcgtgtt tggcgtcgag caatcgatgc gatgcgttgg tcagtccgtg
     5761 tttggccagg acttcgtccg gcgataaagc cggtacctcg ggaaaaacgg ggcgtccacc
     5821 gggtatctga accccaggcg cgcgtgtcaa gaagaaggtg tcataacgat ctaagaacaa
     5881 tccaaataca tccgtcccgc cgatgacacc tatactgcca tttggcgcgc ccagaacggt
     5941 cagcacttcc tctaacgtgg caccggtcgg attccaaaat aaggcgttgc cattatttgc
     6001 atcactcgct atggaggaaa ttctgcgcgt caaaatcaat cttcgccgca tgtccgagcg
     6061 tctgtgccgt tctcgagaat ggcggccgtg cacgacaacg tctacgccat tcagcccccg
     6121 ctcaaaaaat tcttggtcgg catcgaattt aagtgcgcgg ggcatagtgc cctttgcagt
     6181 tgcgatcatg ccattgtccg aaacgatggc gtagccttcg atccgagaga gcgcgttcat
     6241 gcgagcgtgt tgcacccttc ttacgacgga acgctgcgcc cattagcgtg ccgacttcca
     6301 aagctttttg agtgggcctt ttctaccgaa caccggatct ttgctcggta gtcggacctt
     6361 tgggatcgtg cgcacggcct tggtatgttc gtctcgtcgt ccggtgtact cgtcgtattt
     6421 tccagatgca ggataagcgc caacaaccag caagtccttg gttgctctga tagcctcgtg
     6481 gccggtgcca gccggcagga tgacgacatc acccggcttg agatggaata acttgcctcg
     6541 tttgccgcca aaacgtacgc gagcccgtcc ccgcgctatg ccaagcactt cgtgtgtgcg
     6601 cggatggtag tgaacataat cgtaaattcc gttgcgccac gagccgatcc aatcgtttcc
     6661 tttgaaaaca cgttcaaata ccgcggcagg atctacggct ccaatgaggg aaataacatt
     6721 gcaataatga atgaaaggaa gtgtcggatt gttaggaatg tgattgttgt ctttgaaaac
     6781 agtggcgcgc ggttttcgtt ttttgattcg ctttctcaat tcccgagctg ttggttgtgc
     6841 gatccccgtc agatgctcga gcccgctttt tattgtttcg accgcataca ttattgcaac
     6901 atcactcttc attcgccttt tgcgcagggt gcttcacggg aatgagcatc tgtacctgat
     6961 ccttttcaca agcaatctca gcgacctgct tggtatctcg attgccgtgc gcctcatcat
     7021 cgagacggtt agccgtttca gcccacgtaa gctctacagt tttgccttgt cgcgttgtaa
     7081 cgggagctgc ctcatcaagc ggtgacgcga gccactctct caaatcgcga cggcggtcag
     7141 cgtcaaaaca aactatgtcc
//
LOCUS       DATDHO010000668         1537 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_378404, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000668 DATDHO010000000
VERSION     DATDHO010000668.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1537
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_378404"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..411
                     /locus_tag="VIY07_12845"
     CDS             <1..411
                     /locus_tag="VIY07_12845"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY6382677.1"
                     /translation="KAGAAAVVDGAAADASQQIIDITKGGAWGVIDLVGSSQSARVGY
                     DSLIKGGKYVIVGLYGGDLTVSLPPIPMRALTIQGSYVGSLPEMKELIELVRRTGVPP
                     VPVATRPLEDVNAVMDQLRAGKVIGRVVLTPAAN"
     gene            583..1377
                     /locus_tag="VIY07_12850"
     CDS             583..1377
                     /locus_tag="VIY07_12850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382678.1"
                     /translation="MSPDLYFALTLIVKMAVTAAFLLAATITAERAGPLIGGLVATLP
                     ISAGPVYIFLALDHDAHFIAQSALGSLVTNAYNVIFALTYALLAQRHSLAVSFGTALA
                     VWIVLMWMGAAVSWTVGLAVLFNCAVVAVALWISAPLRHAPMPRVETRWYDLVLRAVM
                     VALLVGVVVTLSFRIGPTASGNLAVFPIVLSSIMIILHHRVGGPATAAVMANAVIGLG
                     GFAVAVLVLSLTAEPFGSAVALALALLVSVGANLMIYVVRQRLAVK"
BASE COUNT          234 a          441 c          503 g          359 t
ORIGIN      
        1 aaagcgggag ccgcggcggt ggttgacggt gctgctgccg acgcctcgca gcaaattatt
       61 gacattacca aaggcggtgc ctggggcgtg atcgatctcg tgggatcgtc gcagagcgcg
      121 cgcgttggct atgacagcct gatcaagggc ggcaaatacg tcatcgtcgg tctttatggc
      181 ggagatctca cggtctcgct gccgccgata cccatgcggg ccttgaccat tcagggctcg
      241 tatgtcggga gcctgccgga gatgaaggaa ttgatcgagc tcgtgcggcg gaccggcgtg
      301 cctcctgtcc ccgtcgccac aaggccgctc gaagacgtaa acgcagtcat ggaccagttg
      361 cgcgccggca aagtaatcgg ccgcgttgtg ttgacgccgg ccgccaattg atgacagtgg
      421 cgagggctta gggaataacc gtcatggccg ggcttgtccc ggccatccac gtttttttgt
      481 cgattgctgc gtcgtgaaga cgtggatgtc cgcaacatag gcgtgcgaaa gcacgccgtc
      541 cttcggacgg ctatgtgcgg gcatgacgtt tggaatctcg agatgtcccc cgatctttat
      601 ttcgcgctca cgctcatcgt caaaatggcc gtgaccgcag cgtttctgct cgcggccacg
      661 attaccgccg aacgcgccgg gccgctgatt ggcggtctgg ttgcgacgct tccgatcagc
      721 gcgggcccgg tctacatctt tctggcgctc gatcacgacg cccatttcat cgcccagagc
      781 gccttgggta gtctcgtgac caatgcctat aacgtgattt tcgcgctgac ctatgcgctg
      841 cttgcgcaaa ggcattcgct ggccgtgagt ttcggcacgg cgctcgcggt ttggatcgtg
      901 ctcatgtgga tgggtgcggc tgtttcctgg acagttggtc tggccgttct attcaattgt
      961 gcggttgtag ctgtcgcttt gtggatttcg gcgccgctgc gtcacgcgcc gatgccgcgg
     1021 gtggaaacgc gctggtacga cctcgtgctg cgcgcggtga tggttgctct ccttgtggga
     1081 gtcgtcgtga cattgagttt ccgtattggc ccgacggcca gcggcaatct tgcggttttt
     1141 ccgatcgtgc tcagcagcat catgatcatt ctgcatcatc gggtgggtgg gccggccacc
     1201 gcggccgtca tggccaatgc cgtgatcggg ctgggcggtt tcgccgtcgc ggtcctagtg
     1261 ctcagtctca ccgccgaacc gttcggatct gcggttgcgc tggcattggc attgctggtt
     1321 tcagtcggcg ccaacctgat gatctatgtg gtgcggcaaa ggctggccgt gaaatgagcg
     1381 ctctcgtcgg gaattcattg ttctggtacg ggctcgcgtt gaagatcgcg atgaccgcct
     1441 cgatcgtcgt ggcggcatcc atcgtggtcg agcgcagcgg gccgttcatc ggatcgctga
     1501 ttgccgcgtt gccgaccgcc ggcggcgccg ccatgat
//
LOCUS       DATDHO010000669         4036 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_428367, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000669 DATDHO010000000
VERSION     DATDHO010000669.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4036)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4036)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4036
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428367"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1376
                     /locus_tag="VIY07_12855"
     CDS             <1..1376
                     /locus_tag="VIY07_12855"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6382679.1"
                     /translation="AFFLPTLPITLGWILLLDPNYGVFNQLLIKLPFIERAPFSIYSV
                     GGIMWVHLTLTTVPVMTILLMPALRQFDAAIEESARVCGSGPWGILRRITLPLLSPAI
                     LTVTIAGLIRSLEAFEIEQLLGTPAGIDVYSTRIFEMVSWEPPRFPAAMALSSFFLAI
                     LFILALFYQRFTQKREFATVGTRGISLRPMLVGRWRYIASAVCLVGSALWIILPIVML
                     ILGSFMRLYGFFSVKSPFTAQHWLSAFRDPLLLVCLKNSLVIGLGVGIVGLAVYAMIA
                     YVIVRTQIPARATLSILAWLPWAVPGILLGVALLWLLLSLPGMSLIYGTFAPLILVLI
                     IKEMPIGTHMMKAALGQISKELEEASWACGAGRFTTFWRISLPLVTPTLISIFAIILI
                     AALRDISTTILLVTAKTRPLSVLMLEYSRGGQLEIASILGVMITTVAVAMAMMTRRLG
                     ARISIES"
     gene            1466..2752
                     /locus_tag="VIY07_12860"
     CDS             1466..2752
                     /locus_tag="VIY07_12860"
                     /inference="COORDINATES: protein motif:HMM:NF039910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HEY6382680.1"
                     /translation="MLPEENKLLTETAAGTPCGALMRRCWQPAALSEELPPNGDPLPI
                     MLLGEELVLFRDKRGRLGLIDGHCAHRGADLSYGRLEDGGLRCIYHGWLYDVTGKIID
                     MPAEEDGGKSFRDSICHKAYPVEERAGVIFTYMGPGEPPLFPSYQFLNAPLDRTFAIK
                     LYSECNYLQGNEGNIDLAHLSFLHYNQNTFARYGVGAEIEQLNSRGAAPGKEAFDAEL
                     TDYGVRSYKIWHNAKPGFYHLYVTEFVLPNLTTFGGAGYAMGGYSVNWHVPIDDARHW
                     KYTFMYSTKDPISMETLRRNRAQMTPDYRPLNNKANRYDQQRQSMQLEGYCGLGLNFQ
                     IQDLCVTEGMGPIMDRAKEHLTPMDRPIVAARKLLMNAIRDLQNGREPANVAREPERN
                     QFQLVACEDLVPESMPWKEYIREKISARHPSRGTSL"
     gene            2749..3978
                     /locus_tag="VIY07_12865"
     CDS             2749..3978
                     /locus_tag="VIY07_12865"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6382681.1"
                     /translation="MNEILRLGFAGLGEAATRVLPEIVRLPYIKVSAAADSRPNALKT
                     FREEFGGETYPSVEAMCQSPNLDAVYVATPHEFHASHTIAAAENGKHVIVEKPMALSI
                     DECEAMNAAARTHGVKLLCGHTHSFDPPIRQMREIIQSGELGDVRMIHTWNYNDFMVR
                     PYTNKDLNSSHGVVLNQGPHHVDTLRLLGGGMVRSVRAMTGLWDATRPEGAYTGYLEF
                     ENRVAATMIYSGYGFFDTAELYGWVAEGGYIRHSETNAHARRSLNQINGPDREAKLEQ
                     FKEQLRYGVRGIHKEQVTHGWPGLAGESFEVKHQKFFGLTVVSCEKGEMRQSPDGILV
                     YGDGKRWEVPVQGGLTGRAAEVTELYEAIVHDRPVAHDGRWGEATLEVCLGILESAAE
                     RKEVYMSHQVPVEDHSR"
BASE COUNT          835 a         1131 c         1161 g          909 t
ORIGIN      
        1 ttgctttttt tctgccgacg ctgccgatca cgttaggttg gattctctta ttggacccca
       61 attacggcgt gttcaatcag ctgcttatca agctcccgtt cattgagcgc gcgcccttca
      121 gcatctactc cgtcggcggg atcatgtggg ttcatctcac cctaacgacg gttcccgtca
      181 tgactatact gctcatgccg gctttaagac agtttgatgc ggcgattgaa gaatcggcgc
      241 gggtgtgcgg ctcgggaccc tggggaatat tgcggcgcat cactctgccg ctcctctcac
      301 ccgctattct taccgtaacc atcgccggac tgattcgcag cctcgaagcc ttcgagatcg
      361 agcagctcct cggcacgccc gccggcatcg acgtttattc cacccggatc ttcgagatgg
      421 tttcctggga gccgccccgc tttcctgcgg cgatggcctt gagcagtttt tttctagcga
      481 tcctgttcat cctcgccctc ttctatcagc gcttcacgca aaaacgggag tttgccacgg
      541 tcggcacccg cggcatttcc ctgcgtccca tgctggtcgg acggtggcgc tacattgcct
      601 ccgctgtttg ccttgtcggc agcgctctat ggattattct gcccatagtg atgctgatcc
      661 tcggctcgtt catgcggctc tacggatttt tttccgttaa gtcccctttc accgcccagc
      721 attggctatc ggcgttccgc gatccgttgt tgttagtctg ccttaagaac tccctggtta
      781 tagggctggg ggtcggaatt gtcggcttgg ccgtatacgc gatgatcgcg tacgtgatcg
      841 tgcgcaccca gataccggcg cgcgcgactc tcagcattct cgcctggctt ccctgggccg
      901 tgccggggat cctattggga gtggcgctgc tctggctgct attatcgcta cccggtatgt
      961 cgcttatcta cggcaccttc gctcctctga ttctggttct catcatcaaa gagatgccga
     1021 tcggcactca tatgatgaaa gcggcgctcg gacagatttc caaggaattg gaagaggcgt
     1081 cgtgggcgtg cggcgctggc cgtttcacca ctttctggcg catttcgctg cctctggtca
     1141 cgccgacgct gatcagcatc ttcgccatca ttttgattgc cgcgctgcgc gatatcagca
     1201 cgaccatcct gctggtcacg gcgaagacca ggccgctatc ggttctgatg ttggaatatt
     1261 cccgcggcgg acaactggag atcgcctcga ttctcggtgt gatgattaca acggtggcgg
     1321 tggctatggc gatgatgacg cgtcgcctcg gtgcgagaat tagcattgaa tcttgaggga
     1381 acagcggcag gacctaaact gtgttgggct aattcagcgc ccattgtcaa agagccaacg
     1441 ggattagaaa gagcggagga agcttatgct gccggaggaa aataaattat tgactgaaac
     1501 tgccgcgggc acgccttgcg gcgcattgat gcgccgctgc tggcagcccg cggcgttatc
     1561 cgaggaactg cctccaaacg gcgatcccct gccgattatg ttgttgggcg aagagctggt
     1621 gctgtttcgc gacaagcgag gacgcctcgg cctcatcgat ggccactgcg ctcaccgcgg
     1681 cgcggatctc agctacggca gactcgaaga cggcggcctg cgttgcattt atcatggctg
     1741 gctgtacgac gtgacgggca agatcatcga catgccggca gaggaagacg gcggcaagag
     1801 ttttcgcgat tcaatttgtc acaaagcgta tccggtcgaa gaacgcgccg gggttatctt
     1861 tacctatatg ggaccggggg agccgccgtt gtttccgagt tatcagttcc ttaacgcccc
     1921 gctggatcgc acctttgcca tcaagctcta cagcgagtgc aattatctcc aggggaacga
     1981 aggcaacatt gatctcgcgc atctttcttt tctgcactac aaccaaaaca cgtttgcgcg
     2041 ctacggcgta ggtgccgaga tcgagcaact gaactcccgc ggcgcggctc cggggaaaga
     2101 agccttcgac gccgaattaa ccgactatgg tgtcaggagc tacaagatct ggcacaacgc
     2161 caaacccggc ttttatcacc tctacgtgac cgagttcgtg ctgcccaacc tgaccacctt
     2221 cggcggcgcc ggttacgcca tgggggggta ttcggtcaac tggcatgtcc cgatcgacga
     2281 cgcgcgccat tggaaataca cgttcatgta cagcaccaag gacccgatca gcatggagac
     2341 tttgcggcgt aatcgagcac aaatgacccc cgattatcgg ccgctgaaca acaaggcaaa
     2401 tcgttatgat cagcagcgcc aatcgatgca gctggagggc tattgcggcc tggggcttaa
     2461 ttttcagatt caggacttgt gcgtcaccga gggcatgggt ccgatcatgg accgagccaa
     2521 ggagcactta accccaatgg atcggcccat cgtggcagcg cgcaagctct taatgaacgc
     2581 tattagagac ctgcaaaacg gtcgtgaacc cgcaaacgtc gctcgggagc ctgaacgaaa
     2641 tcaatttcag ttggttgcct gcgaggatct cgtaccggag tcgatgcctt ggaaagaata
     2701 tattcgagag aaaatttcag cccgacatcc gagccggggg acttcactat gaatgaaatc
     2761 ttgagactgg gctttgcggg actgggcgag gctgcgactc gtgtcctacc ggagatcgtt
     2821 cgattgccgt atataaaagt cagcgcggcc gccgattcgc gcccaaacgc tttgaagacg
     2881 ttccgcgagg agttcggcgg cgaaacctac ccaagcgtcg aagcgatgtg tcaaagcccc
     2941 aatctcgatg ctgtctatgt tgccaccccc catgaatttc atgccagtca cacgatcgct
     3001 gctgccgaga acggcaagca tgtgatcgtg gaaaaaccga tggcgctgtc gatcgacgaa
     3061 tgcgaagcga tgaatgcggc ggcgcgcacg cacggcgtca agctcctatg cggccatact
     3121 catagcttcg atccgccgat ccggcaaatg agagagatca tccagagcgg cgaactgggc
     3181 gacgtccgca tgatccacac ctggaactac aacgacttta tggttcgccc ctatacgaac
     3241 aaagatctga actcgagtca tggcgtggtg ctcaatcaag gtccgcacca tgtggacacc
     3301 cttaggcttc tcggcggcgg gatggtgcgg agcgtgcgtg ccatgaccgg tctgtgggat
     3361 gcgaccaggc ccgagggtgc ctataccggt tatctggaat tcgagaaccg cgtggcggcg
     3421 acaatgattt atagcggcta tggctttttt gacaccgcgg aactctacgg ttgggttgcc
     3481 gaaggcgggt acatacgcca ttcggaaacc aacgcgcacg cgcgccgcag tctcaaccaa
     3541 atcaacggtc ccgaccgcga agcaaagctg gagcaattca aggagcagct ccgctatggg
     3601 gtgcgcggca ttcataagga acaagtcaca catggctggc ccggcctcgc tggagagtcg
     3661 tttgaggtta agcaccagaa attttttggt ctcaccgtgg tcagctgtga aaagggtgaa
     3721 atgcgccagt cgcccgacgg tatccttgtt tatggagacg gaaagcgctg ggaagttccg
     3781 gtccagggtg gtttgaccgg tcgcgctgca gaggtcaccg aactctacga agccatcgtt
     3841 catgatcgtc cggtggcgca cgatggtcga tggggtgaag cgacacttga ggtctgcctc
     3901 ggtatcttgg agtcggcggc cgagcgcaaa gaggtttaca tgtcccatca agtgccggtc
     3961 gaggatcatt cacgttgaca agggatcttt tgagaacaaa ttcgggtcgg acatagaccg
     4021 atggatttat tggcag
//
LOCUS       DATDHO010000670         4021 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_428469, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000670 DATDHO010000000
VERSION     DATDHO010000670.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4021)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4021)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428469"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="VIY07_12870"
     CDS             <1..554
                     /locus_tag="VIY07_12870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY6382682.1"
                     /translation="PKSSTAAAAGGCMLVHSDALASVGGIASIRNALIDDCSLAAKMK
                     TMGPIWLGLSDRVHSIRPYETFSDVRRMISRSAYAQLRYSPLLLAATLAGMAITFMVP
                     PLLAIFAAGLPRFLGLLAWLAMTISFLPTLRFYRLSPLWSLGLPAIAGLYLYYTLSSA
                     YLFVKGQGGEWKGRVHADATSLQ"
     gene            551..1429
                     /gene="hpnC"
                     /locus_tag="VIY07_12875"
     CDS             551..1429
                     /gene="hpnC"
                     /locus_tag="VIY07_12875"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HEY6382683.1"
                     /translation="MTSSGQLRSGKGAHDENFPVASRLIKRQHRPVILAFYEFVRVAD
                     DIADHPGLVSTEKIARLDRLEESLLGRGGSDPEGLRLRAKLEERNLSPRHAQDLLSAF
                     RQDATKHRYATWDELIDYCSRSAMPVGRFVLDVHGETRATWPASDALCAALQIINHVQ
                     DCAKDYRALDRVYIPLDALAANGASVEHLEGTETAPELKACLRGVVARTASLLDESRG
                     LEARVSDTRLALEISVIQSLASRLIAILMVRDPLAERVHLTKAEALATALNGGTRAIV
                     RRLVRTVAPTHRYQTP"
     gene            1426..2274
                     /gene="hpnD"
                     /locus_tag="VIY07_12880"
     CDS             1426..2274
                     /gene="hpnD"
                     /locus_tag="VIY07_12880"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HEY6382684.1"
                     /translation="MNVQVPESLAHRSSPASRAGGSSFYLAMRLLSREKREAIFEVYS
                     FCREVDDIADNDSPRPQRLALLSLWRQNIDALYSGNIPIGLERLAKIIARFDLRKEDF
                     LAVIDGVEMDAREDIRAPSLEQLELYCDRVASAVGRLCVRIFGMSDADGKLLAHHLGR
                     ALQLTNILRDIDEDAGVGRLYLPREALALANIRTSDANAVASSPNLAPACNFIVDRAR
                     AHFAKADEIMARCPRQVVRAPRIMGAVYRQKLEDMVSRGWLPPRNRLHVKKSYLLWIA
                     LRHAFV"
     gene            2261..3532
                     /gene="hpnE"
                     /locus_tag="VIY07_12885"
     CDS             2261..3532
                     /gene="hpnE"
                     /locus_tag="VIY07_12885"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HEY6382685.1"
                     /translation="MRSSEDGTVHIIGAGLAGLSAAVRLCGSRRGVVVHEATAYAGGR
                     CRSYFDQATDMMIDNGAHLLLSGNHAALSFVETIGSSAGLHGPSEAEFDFIDLPSGEK
                     WTLRFGDGRFPWWVFDKDRRVPQTDVVDYLPLARLLWTPADKPIAEVISCSGPIYERL
                     LEPLLLAALNIQPRHGSAKLASVLIRETLGLAGQACRPLLARDGLANVFVEPAIRYLR
                     ERGVSVVFEDELTAVKFDGRRVSRLEFAKGNVDLGINDTVILAVPPYVAANFVPDLRA
                     PSSFRGIVNAHFRIDPPAGLPPILGVINGTCQWIFALPGRISVTISDGGEYFTMPRTD
                     LAQTIWGEVAKVSGLPPPLPPWQIVRERRATFAATPEQNALRPPPETKWENLFLAGDW
                     TATGLPATIESAVRSGYRAANLTGQRLRAAA"
     gene            3529..>4021
                     /locus_tag="VIY07_12890"
     CDS             3529..>4021
                     /locus_tag="VIY07_12890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009800064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prenyltransferase/squalene oxidase
                     repeat-containing protein"
                     /protein_id="HEY6382686.1"
                     /translation="MTLVEKSHSSPGFGDVADGAGQALLDCQRSDGHWVFELEADATI
                     PSEYILLRHYRGEPRDAALEQKIANYLRRIQGKHGGWPLYHDGDFDMSASVKAYFALK
                     MIGDNPDVPHMKRAREAILARGGAIQCNVFTRVLLSLYGILSWRSVPEMPVEIMLLPR
                     WFPF"
BASE COUNT          757 a         1169 c         1207 g          888 t
ORIGIN      
        1 aaccaaaatc gagcaccgct gcagcagcag gaggctgcat gctcgtgcac tcggacgcgc
       61 ttgcgagcgt tggtggtatt gcgagcattc gcaatgccct gatcgatgat tgttcgttgg
      121 cggccaagat gaaaacaatg gggccaattt ggttgggtct cagcgaccgc gtacacagca
      181 ttcggcccta tgaaactttt tccgacgtca ggcgtatgat ctcacggtcc gcctatgcgc
      241 aacttcgtta ctcaccgctg ctcctggctg cgacgctcgc tggcatggct ataactttca
      301 tggttccgcc acttcttgcg atctttgccg ccggcttgcc ccgttttttg ggattgcttg
      361 cctggctggc gatgacgata tcttttctgc cgacgttgcg gttctataga ctgtctcctc
      421 tatggagcct cgggctcccg gcaattgccg ggctatatct ctattacaca ctcagctcgg
      481 cctatctgtt tgtcaaaggg caggggggtg aatggaaggg acgcgttcac gccgatgcga
      541 cgagcctgca atgacctcta gcggacagct tcgatcgggc aagggtgcgc acgatgagaa
      601 ttttccggtc gcatcgcgtc ttatcaagcg gcaacaccgg cctgtcatcc tggcgttcta
      661 cgaatttgtt cgcgtcgccg acgatattgc cgaccaccct gggcttgtga gcacggaaaa
      721 aattgcacgg cttgaccgtc tggaggaaag cctgctcggc cgaggcggaa gtgatccgga
      781 aggcctgcga ctccgtgcga agctcgaaga gaggaatctg tcaccgcgtc atgctcaaga
      841 tttgttgagc gcattccgtc aggacgcgac caagcatcgt tacgctacct gggacgagct
      901 catcgattat tgctcacgct cggcgatgcc cgtcggccgc tttgtgctcg acgtccatgg
      961 cgaaacgcgg gcaacctggc cggcgtcgga tgccctctgt gcagcgctgc agatcatcaa
     1021 tcatgtgcag gactgtgcca aggactatcg cgcgcttgat cgggtctata ttccgctcga
     1081 tgcgctggcc gcgaatggcg ccagtgtcga acatctggaa ggcacggaaa cggcacccga
     1141 gttgaaagcg tgtcttcgcg gggtggtggc tcgcacggcg tctctattgg acgaaagccg
     1201 cgggcttgag gccagggtca gcgatacgcg ccttgcgctc gagatctcgg tcatccaatc
     1261 gctggccagc cgcctgatag caattcttat ggttcgcgat ccattggccg agcgcgtgca
     1321 cctcaccaaa gccgaagcgc ttgcgaccgc tttaaatggc ggtactcggg ctatagttcg
     1381 ccggctggtg cgcacagtag cgccgacgca ccgatatcag accccatgaa cgtccaggtt
     1441 ccagaatcct tggcacatcg atcatcgccg gctagccgtg caggcggcag ctccttttat
     1501 ctcgccatgc gtctcctcag ccgcgaaaaa agggaagcaa tctttgaggt gtattcgttt
     1561 tgccgagagg tcgacgatat cgccgacaat gattcgccgc gtccgcagcg gctcgcgcta
     1621 ctgtcgttgt ggcgacagaa tattgacgcg ctttattccg ggaatattcc gatcggactc
     1681 gagcggcttg cgaagatcat tgcccgcttt gatttgcgca aagaagactt ccttgcggtt
     1741 attgatggcg tagaaatgga tgcgcgggaa gatattcgcg ctcccagtct cgagcagctt
     1801 gagctttatt gcgatcgcgt cgccagcgcc gtcgggcggt tatgtgtgcg cattttcggc
     1861 atgagcgacg ccgacgggaa attgctcgcc catcatcttg gtcgggcgct ccaattgaca
     1921 aatatcttgc gtgacataga cgaggatgcc ggagtggggc gcctatacct gccacgcgag
     1981 gcgttggcgc ttgccaatat cagaaccagc gacgcaaacg cagtcgcatc cagtccgaac
     2041 ctcgcccccg cctgcaactt tattgtcgac cgggctcgcg cacattttgc gaaggcagac
     2101 gagatcatgg cgcgctgtcc acgccaggtc gtgcgagcgc ccagaatcat gggagcggtc
     2161 tatcgccaga aactcgaaga catggtatcg cgcggctggc tcccgccaag gaaccgcctt
     2221 cacgtgaaaa agtcttattt attgtggatt gcgttgcggc atgcgttcgt ctgaagacgg
     2281 cacggtacac attatcgggg ctggactggc ggggctttct gccgcggtgc gcctgtgcgg
     2341 ctcgcgccgc ggagtcgttg tgcacgaggc gacagcatac gcgggcggca gatgccgttc
     2401 atacttcgac caggccaccg acatgatgat cgataacggc gcacatttgc tgctgtcggg
     2461 aaatcatgcc gccctgtcct ttgtcgagac catcgggtcg agtgcaggcc tgcacgggcc
     2521 aagcgaggcg gagtttgatt tcattgatct gcccagtggc gagaagtgga ctctgcgttt
     2581 tggcgacggt cgatttccat ggtgggtttt cgacaaggac cgccgcgtgc cacagaccga
     2641 cgtcgtcgat tacctgccgc ttgcgcgtct cctctggact ccggccgata agcccatcgc
     2701 agaagtcata agttgctcgg ggccgattta cgagcgattg ctcgagcctt tgctgcttgc
     2761 cgcgctcaat atccaacccc gccacggatc agcgaaactg gccagcgtgc ttatccgtga
     2821 aacgcttggc ctcgccgggc aagcgtgccg accattgctc gcgcgcgacg ggttggcaaa
     2881 cgtatttgtt gaacctgcga ttcgctattt gcgcgagcgt ggcgtctcgg tcgtgttcga
     2941 ggacgaattg actgcagtca aatttgacgg tcgtcgcgtg tcgcgcctcg aatttgcaaa
     3001 agggaatgtt gatctcggaa tcaatgatac ggtaatcctt gccgttccgc cctatgtggc
     3061 agcgaatttc gtcccggatt tgcgggctcc gtcctcattt cgtgggatcg tgaatgcgca
     3121 tttccgcatc gatcctcccg ctgggttgcc cccgatactg ggggtgatca acggcacctg
     3181 ccaatggatt ttcgctctgc cgggccggat ttcggtgacc atcagcgacg gcggcgagta
     3241 ctttaccatg ccgcgcaccg atctggcgca gaccatctgg ggcgaggtcg cgaaagtatc
     3301 gggccttcca cctccgttgc cgccttggca gatcgttcgt gagcgccgcg cgacgtttgc
     3361 cgccacaccg gagcaaaatg cactccgtcc gccgccggaa acgaaatggg agaacctgtt
     3421 cctcgcaggc gactggaccg cgaccggctt gccggccacg attgaaagcg cggttcgttc
     3481 cggctatcgc gccgccaatc tcacaggcca gcgccttagg gcagccgcat gacgctggta
     3541 gagaaatcgc attcctcgcc cggcttcggc gatgtagccg acggggcagg acaggcgttg
     3601 ctcgactgcc agcggagcga cgggcattgg gtgttcgaac tcgaagccga tgcgacaatt
     3661 ccctccgaat acatcttgct tcggcactat cgcggcgaac cgagagacgc ggcgctcgag
     3721 cagaagattg ccaactatct gcgccgtatc caaggcaagc atggcggctg gccgctttat
     3781 catgacggcg attttgacat gagcgcgagc gtcaaagcct actttgcgct caagatgatc
     3841 ggcgacaacc cggatgtccc tcatatgaaa cgggcccgcg aagcgatcct cgcgcgcggt
     3901 ggagcgatcc agtgcaatgt gtttactcgc gtgctgctgt cgctctatgg gattttaagc
     3961 tggcgcagcg tgccggaaat gccggtcgaa attatgttgc tgccgcggtg gtttcctttc
     4021 c
//
LOCUS       DATDHO010000671         1502 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_31340, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000671 DATDHO010000000
VERSION     DATDHO010000671.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31340"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..936)
                     /locus_tag="VIY07_12895"
     CDS             complement(<1..936)
                     /locus_tag="VIY07_12895"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEY6382687.1"
                     /translation="MLRGGDFYCRRWRWSALGLATIFAITSLSDAADARRGRHRPQPA
                     ESYQPDYASIVVDVNSGSVMQATNADSPRHPASLTKIMTLYLLFERLEQGKIKLNTDL
                     PVSARASQQAPSKLALKPGETIRVETAIRAIVTKSANDVSVVVAEALGGDETNFARLM
                     TAKARALGMTQTTYRNASGLPDEEQITTARDQAILGRAIQDRFPNYYHYFATRIFDFR
                     GKSIRNHNHLLGVVEGVDGIKTGYIRDSGFNIVTSMRRANRHLIAVVFGGRSANARDA
                     RVRSLMENNINIASVKRTAPPLVEGWDVAQARKDGT"
     gene            1208..>1502
                     /locus_tag="VIY07_12900"
     CDS             1208..>1502
                     /locus_tag="VIY07_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006205150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HEY6382688.1"
                     /translation="MVKTFEDLQQVSKDNVDVTLKAFGALSKGSQAIAVEVADYSKKA
                     FEEGTAALEKLFGVKSLDKAVEVQTEYAKTAYEGFVAKASKIGELYADLAKETY"
BASE COUNT          312 a          404 c          458 g          328 t
ORIGIN      
        1 ggtgccgtct tttcgcgctt gcgcgacgtc ccatccctcg acgaggggcg gagcagtgcg
       61 ttttacggat gcgatgttga tgttgttttc catcaggctt cgtacccgcg catcccgtgc
      121 attggccgaa cggccgccga aaacaaccgc gatcaggtgg cgattggcgc gtcgcatcga
      181 agtgacgatg ttgaagcctg aatcgcggat gtagccggtc ttgatgccat cgacgccctc
      241 gacgacaccg agcaagtgat tgtggttgcg tatcgacttg ccgcggaaat cgaaaatccg
      301 cgtcgcaaag taatggtagt aattcgggaa tctgtcctgg attgctcggc caagaatcgc
      361 ctggtcccgt gctgtggtaa tttgctcttc gtcgggcaga cctgaagcgt tgcggtaggt
      421 ggtttgcgtc atcccgagcg cccgcgcctt ggcagtcatc aacctggcaa agttcgtctc
      481 atcgccaccc agcgcctcgg ccacgacgac tgagacatca ttggctgact tggtgacgat
      541 cgcgcgtatc gccgtttcca cccgaatcgt ctcgccgggc ttcagagcaa gcttagacgg
      601 ggcttgttgg gaagcgcggg ccgacactgg caggtcggtg ttgagcttga tcttcccttg
      661 ctcgagcctc tcgaacagaa ggtaaagcgt cataatcttt gtcagtgaag ccggatggcg
      721 cgggctatcg gcgtttgtcg cctgcatgac cgagcccgaa ttgacgtcca cgacgatgga
      781 agcatagtcg ggctgatagc tttccgctgg ctgcggccga tggcggccgc gtcgggcgtc
      841 ggcggcgtcg ctaagagaag tgattgcgaa gatggtggcc aggccaaggg cgctccagcg
      901 ccaccttcga caataaaaat cccccccacg caacatccgt tctccccacc ttattgcggt
      961 gacggacccc taggccgcta tcgtggccat tttgtagcgt gtcgtcaggg acccaattta
     1021 tgaccgtagg agaacgcggt ttacaaattc ttaaggcaat ccactggatt ttaaggagtt
     1081 ttcgcaccgc aataaattcc cttgactttt tgtgcagtgc agtataacta tagttcattc
     1141 ccggctgggc cgggttcgaa gtcaaagtca acaaaggcac cgcatggcgg gccgggaaag
     1201 ggatgacatg gtcaaaactt ttgaagacct gcagcaggtc agcaaggaca acgtcgatgt
     1261 cacgctgaaa gcttttgggg cgctctctaa gggcagccag gcgatcgcgg tcgaggttgc
     1321 ggactattcg aagaaggcgt tcgaggaagg aacggccgcg ctggagaaat tgttcggcgt
     1381 gaagtcgctc gacaaggcgg tcgaggtgca gaccgagtac gccaagactg cctacgaggg
     1441 ttttgtggcc aaggcctcca agatcggtga actgtatgcc gatctcgcca aggagacata
     1501 ta
//
LOCUS       DATDHO010000672         1827 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_428585, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000672 DATDHO010000000
VERSION     DATDHO010000672.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1827
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428585"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..1045)
                     /locus_tag="VIY07_12905"
     CDS             complement(44..1045)
                     /locus_tag="VIY07_12905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY6382689.1"
                     /translation="MRKWLLAAAAAAIFVAPVAATAQTPIVIKFSHVVAPNTPKGKGA
                     DKFKELAEKYTNGKVKVEVYPNSTLYKDKEELEALQLGAVQMLAPSNSKFGPIGVRDF
                     EVFDLPYLLPNKTALRKVTEGPLGKAMLKKLETKGMVGLAYWDNGFKEMSANRPLRMP
                     EDYRGLKFRIQSSKVLEAQFRALGAIPQVMAFSEVYQALQTGVVDGQENTPSNMYTQK
                     FHEVQKYTTLTNHGYIGYVVVVNKKFWDDLPADIRTQLTKAMDEATVYSNDISEKENA
                     EALEDIKKSGKTELITPTAAETAAMRKAMEPLFQDMASRVGKQLIDDVVKATTGVTN"
     gene            complement(1326..>1827)
                     /locus_tag="VIY07_12910"
     CDS             complement(1326..>1827)
                     /locus_tag="VIY07_12910"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEY6382690.1"
                     /translation="TFCPHFVRFGGQIRRYLPAITHSKVWGLIGMKKLLCAGVFALAM
                     TGLLPNFSQARAMEVTGAQASSINIARIKSVLKLTPAQEHHWAPVEAALRDLARKQQT
                     QTESTSFVRRISNRVVTVVLNSAAVQRLAVAARPLVASLDHEQMRAAQGLAQEMGLGP
                     VVAALR"
BASE COUNT          339 a          548 c          535 g          405 t
ORIGIN      
        1 aagcaaacga gccccggcga taggccgggg ctcgtttaca attctagttg gtgacacccg
       61 tcgtggcctt gaccacgtca tcgatcagct gcttgccgac ccggctggcc atatcctgaa
      121 agagcggctc catggccttg cgcatggcgg cggtttcggc ggcggttggc gtgatgagct
      181 cggtcttgcc cgacttcttg atgtcttcca acgcctcggc attttccttt tccgagatgt
      241 cgttggaata gaccgtggct tcatccatcg ccttggtgag ctgcgtacgg atgtcggccg
      301 gcagatcgtc ccagaacttc ttgttcacga cgacgacgta gccaatgtag ccgtggttgg
      361 tcagcgtcgt gtacttctgc acttcatgga atttctgggt gtacatgttc gacggcgtat
      421 tctcctggcc gtccacgacg ccggtctgga gcgcctggta gacttcggag aacgccatca
      481 cctgcgggat ggcgccaagc gcgcggaact gcgcctccag aaccttggat gactggatgc
      541 ggaatttcag ccctctgtaa tcttcgggca tgcgcagcgg cctgttggcg ctcatttcct
      601 tgaagccatt atcccaataa gcaagcccga ccatgccctt tgtctcgagc ttcttaagca
      661 tggccttgcc gagcggaccc tcggtgacct tgcgcaatgc tgtcttgttg gggagcagat
      721 aaggaagatc gaacacttcg aagtctctca cgccgatcgg gccgaacttc gagttggacg
      781 gcgcaagcat ctgcaccgcg ccaagctgca aggcttccag ctcttccttg tccttgtaga
      841 gcgtcgagtt gggatagacc tcaaccttga ccttgccgtt ggtgtatttc tcggcgagtt
      901 ccttgaattt gtcggcgccc ttccccttcg gggtgttcgg cgccacaacg tgactgaact
      961 tgatcacgat cggcgtttgg gccgttgcgg cgacaggcgc cacgaaaata gcggccgcag
     1021 ccgccgcgag aagccacttg cgcatagacg tcttcctcca gttggtcgag cgaacccggc
     1081 ttttaccttg ttttttctgc cagttagggt ggcactaaac cggttccccg gcaagtagac
     1141 ctattgccaa gatcacatgg ctattgtgaa tgcttaacgt gcgcaagcgt ctgacgttgc
     1201 gcacgtgttc ggcaaaagtg gaaaaacctg cggcgaagcg acgccgcctc gattgcgtgg
     1261 tcccggtgca gccggaagcc gtacgacggg tttcgccccg cccgcgggaa caatcgctcg
     1321 ctggattatc gcaatgcagc gacaacaggc cccaagccca tctcctgggc aagaccttgc
     1381 gccgcccgca tctgctcgtg gtcgagcgag gcgaccagag gacgtgccgc gaccgcgagt
     1441 cgctggacag cggcgctgtt gagcacaact gtcaccacgc gattgctgat ccgtcgcacg
     1501 aagctggtcg attcagtctg cgtctgctgt ttgcgcgcga gatcgcgcag ggccgcttcc
     1561 accggagccc aatgatgctc ctgcgccggt gtcaacttca gcacgctctt gatccgcgcg
     1621 atgttgatcg aggacgcttg cgccccggtg acctccatgg cgcgcgcctg tgaaaaattc
     1681 ggcaacaagc ccgtcatcgc gagcgcgaac acgcccgcgc agagaagttt cttcattccg
     1741 atgagtcccc aaacttttga gtgggtgatg gccggcagat acctgcgaat ttggccgcca
     1801 aagcgaacga aatgcggaca aaatgtg
//
LOCUS       DATDHO010000673         5339 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_31346, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000673 DATDHO010000000
VERSION     DATDHO010000673.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5339)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5339)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5339
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31346"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            57..899
                     /locus_tag="VIY07_12915"
     CDS             57..899
                     /locus_tag="VIY07_12915"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6382691.1"
                     /translation="MNDLRIRIMRPDEISIAVDWAAAEGWNPGYADAACFSQVDPDGF
                     LIAELEGVPAATISCVNYDARFAFLGLYIVRKNVRGRGYGLQIWNAAIAHAGTRVVGL
                     DGVVAQQQNYKKSGFKFAYANIRYGGTVAASGGQRPGVITLAEVPLVAVEADDATVFP
                     APRTAFLRAWIDSPGHVARALVRDGRLAAWGVIRPCREGSKIGPLVGDDREAAEAVLG
                     ALLASAGGGEIFIDVPNVNREAIALAKNLGLAPMFETARMYTGEIPQLRLERAFGVTT
                     LELG"
     gene            942..1331
                     /locus_tag="VIY07_12920"
     CDS             942..1331
                     /locus_tag="VIY07_12920"
                     /inference="COORDINATES: protein motif:HMM:NF018717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEY6382692.1"
                     /translation="MKPDHKIVFALIVGAVTGGAIVQALHAESKPPAYVVGEVDVANH
                     DAFVKEYVPLAMKALSKGGHGYKAIAVGGRTAVIEGEPPRRIVINAFANLDAAIAAYN
                     SPAYKEAAKIGNKYGTFRIYAVEGLQR"
     gene            1538..1711
                     /locus_tag="VIY07_12925"
     CDS             1538..1711
                     /locus_tag="VIY07_12925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382693.1"
                     /translation="MRILFGIAIAAVVAFTAWSVEPTVGKTPSAVSLDPYGMMVHTTN
                     LPQAHYDDYSTIY"
     gene            complement(1859..2386)
                     /locus_tag="VIY07_12930"
     CDS             complement(1859..2386)
                     /locus_tag="VIY07_12930"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY6382694.1"
                     /translation="MPSLIPDAATFERRLAGLPVVKHPARQIVLAAGSKTGRLFFLRS
                     GAVEVIKDGEKIANVSAPGSVFGEQAILLDQPHTADVRTLEQSEFYVADAQAMLAGDP
                     TVALYVAGILARRLDAANRSLIEVKHQLQTGESLSVIGKTVEKVEQQLGYSGDASLVY
                     AGYPYDPFQPDKSVH"
     gene            complement(2439..3755)
                     /locus_tag="VIY07_12935"
     CDS             complement(2439..3755)
                     /locus_tag="VIY07_12935"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382695.1"
                     /translation="MPREPVSNKIMMADHDMQNDDRWYRGKVTRRRVVGYGAGALGAT
                     MLVPPPWLAAFGQAKPLKIGTLQPLSGAAAAGGKTSLVGVQMAVDRINKAGGVNGRPI
                     ELIIADDESKPEVGRRKIEKFLVEDRIDAHQGGLLSNVCLACMPVFEEHKVVNMIGAC
                     LDTTITTRKCSRFTFRPFDYAPAQAVAFAPSLVNLGKKWHIAYADYAWGQSTRDAYAQ
                     QIKKKGGMVVGGTGIPLGTADMTPFLSKIRGNFDGLFAIFFGRDGVAIGNQAFDLGLT
                     KKYKWAGDGGIVESTNLRALGNKIEGFVGINRYLPILDGPLDTPAHRKFLEEASARLK
                     RIDPSGPAPDSFVHSNFEAMNALKLGMQKSGFRGREDTMKLIEALEGLEMPEGDDFPL
                     GEKVLRKEDHQAFNREFIFEMKDGKYKILEVVPKERTMFPPACKFA"
     gene            complement(4137..5120)
                     /locus_tag="VIY07_12940"
     CDS             complement(4137..5120)
                     /locus_tag="VIY07_12940"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6382696.1"
                     /translation="MSWNLVRCAVLGAAITAIAASAQGQDYPTRPVTIVVPLAAGSGM
                     DALARLYADKLQSVLGKPVVVENRPGAALMLAAATVANAPADGYTLLVSTSSAMAINP
                     VLYKKVNYDHVNDFVPISFYVKSPFILVVNPELSVKSVPDLIKYVKESKTPLSYSSPG
                     AGVAQHLSVEYMKKRFGLEITHVPYKNTPQSIQDIAAGHVQLGFAEAGASLPLIRDGK
                     LRALAVSATTRIPSLPDVPPFAEAANAPDFEAVSWHVLFAPAATPKPIVERLHNEMKK
                     IMADPEMIKLTEKIGLIPVDSPDIAGIQKYLASEREKWGTLVKQLDLAGTM"
BASE COUNT         1086 a         1519 c         1569 g         1165 t
ORIGIN      
        1 catagagaag aagatttggc gtctaagatg tcgagcagct gcaggggagt taacgcatga
       61 acgatctgcg catccggatc atgcgaccgg acgagatctc aatcgccgtt gactgggccg
      121 ctgccgaagg ctggaatccg ggctacgccg atgccgcttg cttttctcaa gtagatccgg
      181 atggcttcct cattgccgaa ctcgaaggcg ttccagccgc gaccatatcc tgtgtcaatt
      241 acgacgcgcg tttcgccttc cttggtttgt acatcgtgcg gaaaaatgta cgcggccggg
      301 gctacggact acagatatgg aacgcggcga tcgcgcacgc aggtacacgc gtggtcgggc
      361 ttgatggcgt ggtggcgcag cagcagaact acaaaaagtc gggtttcaaa ttcgcctatg
      421 ccaacattcg ttatggtggc accgtcgccg cgtcgggtgg acaacggcct ggtgtcatca
      481 cgcttgccga agtcccattg gtggcggtgg aggccgacga tgcaacggta tttcccgcgc
      541 cgcgcaccgc attcctacgc gcctggattg attcacccgg acatgttgcg cgcgcactgg
      601 tgcgcgacgg tcgactggcc gcttggggcg tgatccgtcc gtgccgcgag ggcagcaaga
      661 tcggtccgct ggttggcgac gaccgcgagg ccgcagaagc ggtactggga gctttactgg
      721 caagcgcggg gggcggtgag attttcatcg acgttccgaa cgtcaaccgc gaagcgatcg
      781 cgctggcaaa aaatttaggg cttgcaccca tgttcgagac tgcgcgcatg tataccggcg
      841 agattccgca attgcgactc gagcgagcat tcggcgtcac gaccttagag ctagggtagc
      901 cgatcgatat caagcccagt caattaagaa tgggaacgct catgaaaccg gatcacaaga
      961 tcgtattcgc tctaatagtt ggcgccgtta ccggcggagc catcgtgcaa gcgcttcacg
     1021 ccgagtcaaa accgcctgct tatgttgttg gagaagtcga cgtggctaac cacgacgcct
     1081 tcgtaaagga atatgttcca ctagcaatga aagctctcag taaaggtggc catggttaca
     1141 aagccattgc ggttggcggc aggaccgctg tgatcgaggg tgagccgccc agacgtattg
     1201 tcatcaatgc gtttgcgaat ttggacgcag ccatagccgc atataactca ccggcctaca
     1261 aagaagccgc gaagattggc aacaaatacg gaacatttcg tatctatgct gtcgagggat
     1321 tgcaacgttg attgcttcgc acgacaaata gttgaagacc agagtcgcaa tcaaacgtta
     1381 gcgacggttc acttcgtaat cgcgaacacg attacgacga taccgtgtga aatgcgtctt
     1441 tttgtgatgc acgacacagc gaagcgagcc caacacagtt acggtcggat caattcgaga
     1501 gcggtaggct ctggcgaaaa atcaaaagga gactcccatg cgtatcctgt tcggcatcgc
     1561 gatcgcagcc gtcgttgcat tcaccgcctg gtcagtcgaa ccgaccgtcg gcaaaacccc
     1621 ctccgccgtt tccctcgatc cctacggcat gatggtccat acgaccaatc taccgcaagc
     1681 tcactacgac gattacagca ccatctactg acagatagtg cgttcggatg atcgatctgc
     1741 ggattagctg gccgtctcct ctgaagccct ggtcgcttcc tctccctggc gaccagggcg
     1801 ccgcttatat cgccgggact catcgcagcg cggttcatac cggctacgac cgcgagcttc
     1861 agtgtaccga tttgtcaggc tgaaacggat cgtacggata gccagcgtat acgaggctgg
     1921 cgtcgccgct gtagcctaac tgttgttcca ccttctcgac cgttttgcca atcacgctaa
     1981 gagactcgcc agtttggagc tgatgcttaa cctcgataag tgatcgatta gcggcatcga
     2041 gtcgtcgcgc aaggatccct gccacgtaaa gagcgacggt tggatcgcca gcaagcatcg
     2101 cctgcgcgtc ggcgacatag aactcagatt gctccagggt cctcacgtcc gcggtatggg
     2161 gctgatctaa gaggatggcc tgttcgccga ataccgagcc tggtgccgat acgttggcga
     2221 tcttctctcc atccttgatg acctccacgg cgccacttct gaggaaaaac agtcggcccg
     2281 tttttgagcc ggctgctagg acaatttggc gggctggatg cttcaccacg ggcaagcctg
     2341 caagcctcct ctcgaaggtc gcggcgtctg gaatgagtga gggcatgctt ggctccttct
     2401 tctcaaattt gatggcttgg acgccgaccg tagttgcgct aggcgaactt gcaggccggc
     2461 ggaaacatcg tcctctcttt cggcacgact tccaggatct tgtattttcc gtccttcatc
     2521 tcgaatatga actcacggtt gaaagcttgg tggtcctcct tgcgcagcac cttttcgccc
     2581 agagggaagt catccccttc cggcatttcg agtccttcga gggcctcgat cagcttcatc
     2641 gtatcctcac gcccgcggaa gcccgacttc tgcatgccga gcttgagcgc gttcatggcc
     2701 tcgaagttcg agtgaacgaa gctgtctgga gcggggcctg atggatcaat ccgtttgagg
     2761 cgcgccgaag cctcttcgag gaacttcctg tgcgctggtg tgtcgagtgg accatcgagt
     2821 atcggaagat agcggttgat gccgacaaaa ccctcgatct tattgccgag cgcccgcagg
     2881 ttggtcgact cgacgatccc gccgtcgcct gcccatttgt acttcttggt gaggccgaga
     2941 tcgaaggcct gattgccgat ggccaccccg tccctgccaa agaagatggc gaataacccg
     3001 tcgaaattgc cgcggatctt cgagaggaac ggcgtcatgt cggcggttcc aagcggaatt
     3061 cctgttccgc cgacgaccat gccgcccttt ttcttgatct gctgggcgta ggcgtcgcgg
     3121 gtggactggc cccaagcata atcggcatag gcaatgtgcc acttcttgcc caggttgacg
     3181 agcgagggtg cgaacgccac tgcctgcgcc ggtgcgtagt cgaatggccg gaaggtgaag
     3241 cggctgcact tcctggtggt gatcgtggtg tcgaggcatg ccccgatcat gttgaccacc
     3301 ttgtgttctt cgaataccgg catgcaggcg agacatacgt tggagagtaa gccgccctgg
     3361 tgggcgtcga tcctgtcctc gacgaggaac ttctcgatct tgcggcgtcc cacctcgggc
     3421 tttgattcat cgtccgcgat tatcagttcg atcggacgac cattgacgcc gccggcctta
     3481 ttgatgcgat cgacagccat ttgaacgccg accaacgagg ttttgccacc ggcggcagcc
     3541 gcgcccgaca ggggctgaag cgtgccgatc ttgagtggct tggcctgtcc gaaagctgcc
     3601 agccatggcg gcggcaccag catggtcgcg cccagcgcgc cggcgccata tccgaccaca
     3661 cggcggcggg tgaccttgcc acgataccag cgatcgtcat tctgcatgtc gtggtcagcc
     3721 atcatgatct tgttgctgac gggttcacgc ggcactgcct gcgcgaaatt tgtcgtgttg
     3781 attgtctcgg ttgtggacgc gtaaatcgag ttggaccgag gtccaattgc ctcgtaccgc
     3841 gtcgggcctc aggttcgtta gaggttaggt ccgtgactcc aactcccaaa cctaagatac
     3901 ccttgacgat atgggtgatg ctgggcgcgg tgatcttttt cgccctgctc atatcttact
     3961 tgcttgtaat cggtgtctac gacatcaccg cgagaggact ttcttgatct tcacgcggat
     4021 ggactaccgc tttgggtcaa aagcaggcat ccggcgtgga tgtctgcctc ttcgggccca
     4081 gagcgtgaat acgcggtcag cgatcctgtc tggcagacaa caaatgcgtt tagcggttac
     4141 atcgtcccgg ccaggtcaag ctgctttacc aatgtgcccc atttttcgcg ctcggaggcc
     4201 agatatttct ggatgccggc aatatcgggt gaatcgaccg gaatcagacc gatcttctcg
     4261 gtgagtttga tcatttccgg gtcagccatg atcttcttca tttcgttgtg caggcgttcg
     4321 acgatcggct tgggtgtggc ggccggcgca aacagcacgt gccaggacac agcctcgaaa
     4381 tccggcgcat tggcggcttc cgcgaagggt ggcacatccg gcagcgacgg aatgcgggtt
     4441 gtcgccgaca ccgcgagcgc gcgcagcttg ccgtcacgga tcagcggcag cgacgcgccg
     4501 gcttccgcga acccgagctg cacatggccg gcggcgatgt cctgaatgga ttgaggcgtg
     4561 tttttgtagg gcacgtgcgt gatttcgagc ccgaagcgtt tcttcatgta ttcgacggag
     4621 agatgctggg cgacgccggc gccaggcgaa gaataggaca gcggagtctt gctttctttc
     4681 acatacttaa tgagatcggg gaccgacttt accgacaatt cgggattgac gacaaggatg
     4741 aacggcgact tcacatagaa cgagatcggc acgaaatcat tcacgtggtc gtagttcacc
     4801 tttttgtaaa ggacggggtt gatcgccatg gcggacgagg tcgacacgag cagtgtgtag
     4861 ccatcggcgg gagcgttggc gactgtcgcg gcggccagca taagcgccgc gccagggcga
     4921 ttttccacca cgaccggctt accgagcacg ctctgcaatt tgtccgcata caggcgcgcc
     4981 agagcatcca tcccggagcc ggcggccagt ggtacaacga tggtcacggg ccgtgtcgga
     5041 tagtcctggc cctgcgcgct tgcagcaatt gcggtgatcg cggcgccaag gactgcgcag
     5101 cggaccagat tccacgacat ctggaagccc tccctctttc aagaatcgcg tctaccaaga
     5161 gatgcgatac ttttttcggc gcaccaatcg gcgtgagcac gtccagtttt atgaaagact
     5221 agcccaatcg ccacgtacaa aacaacattg cgtgcgctgg cgcgtgtcaa actgatgaga
     5281 atcggtggca caagcggaca tctcgctcgt gccgacgcat gtccgcttta cccccaaaa
//
LOCUS       DATDHO010000674         3652 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_329489, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000674 DATDHO010000000
VERSION     DATDHO010000674.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3652
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_329489"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(62..298)
                     /locus_tag="VIY07_12945"
     CDS             complement(62..298)
                     /locus_tag="VIY07_12945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382697.1"
                     /translation="MVAVTYGVTRLPAAKAAERAKAAAPRKNVFIRFVDALVASRMKQ
                     VHREIARHAHLLPYTLDERGNRVVNRFDKLPFSG"
     gene            643..2463
                     /locus_tag="VIY07_12950"
     CDS             643..2463
                     /locus_tag="VIY07_12950"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEY6382698.1"
                     /translation="MFEARFQTFDDSSERAQSAARVAELRAEVKRRGLDGFVVPRADR
                     QQNEYLPASEERLAWLTGFTGSAGTAVILGDRAALFVDGRYTVQANSQVDGNIFSIEH
                     LVDHPPEQWLEQNLKPNAKLGYDPWLHTSDHVEKLKRACAVVGAELVATDSNPIDALW
                     RDRPAPPVGPVTLREIKLAGEAAPDKIKRVRAELKKLRADALLVSDPQNVAWAFNIRG
                     ADVTYTPLALAFAVVPLEGRPALYVETAKLSNNVRHALEEFTDVRGPDDLARDLDRLK
                     DKTIRLDQATASEALTRLISDHGGKPQRGPDPIASLKATKNHAEIVGSRAAHKRDGVA
                     VARFLAWLDKEAPSGKLTEIDAVAALESFRRDTGALKDISFPTIAGAGPNGAIVHYRV
                     TRASNRRIGMNELFLIDSGAQYEDGTTDITRTIVVGEPSEEMRDRFTRVLKGHIAIAT
                     AVFPENTTGAQLDPLARTALWQAGLDFDHGTGHGVGSYLSVHEGPARISKLGTVPLRR
                     GMILSNEPGYYKTAAYGIRIENLVLVIAAPEPVGAEKPLNTFETLTLAPIDRRLIDAR
                     MLSRKERAWVDNYHERVHEVLGPLVDAPTRKWLEKATKPL"
     gene            complement(2922..>3652)
                     /locus_tag="VIY07_12955"
     CDS             complement(2922..>3652)
                     /locus_tag="VIY07_12955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BRCT domain-containing protein"
                     /protein_id="HEY6382699.1"
                     /translation="HLMLFVSRRAFDIEGLGEKQIEFFFDKEWVKEPADIFTLEKKHR
                     SDLLEQEGFGETSVRNLFNAIEARRKIALDRFIYALGIRHVGETTALALARGFGSWKA
                     FHDAALKIAKDDAEAAAEMDALDQIGDTVIEAVKAYFGESHNRGVVERLTKQVTILDA
                     EKPKTNTAVAGKTVVFTGALEKMTREEAKAQAERLGAKTAGSVSRKTDYVVAGPGAGS
                     KLADAKKLGVTVLTEDEWLKLTGV"
BASE COUNT          699 a         1164 c         1101 g          688 t
ORIGIN      
        1 gccataacct ccccccgcga tcggggacac cggggcggct tcgctggcga agcggctgcg
       61 atcagccgct gaacggcagc ttgtcgaagc ggttgaccac gcgattgccg cgctcgtcga
      121 gcgtgtacgg caacagatgc gcatgcctgg caatttcgcg atggacttgc ttcatgcgcg
      181 aggcgacgag cgcatccacg aaacgaatga aaacgttctt gcgcggcgcg gcagctttgg
      241 cgcgctcggc agctttggca gcgggtagcc gggtaactcc ataagtgacg gcaaccattt
      301 tcacatctcc ttctcgtcat cgaagcaccg gaaacacgta acatcgcttc gacctattgc
      361 actgcaatat aactctcgtc gcagccgcca gtatgtgcgg ccttgcatgg ttgccctgta
      421 aatccggcat gaatcgattg atcatttacg gaaatcttaa ccatgagcat gtccgataga
      481 tgcggtgcac aaattttgaa tggggcgccg gttttgctgc caatttgccg gcggcggagc
      541 aagaattttc accaatcttg cgcttatgct tccgcgcgtt gctttttccg tttcgcgcat
      601 gcctgcattg cccggaacgc gcagcacggt agagtcgctt cgatgtttga ggcccgcttc
      661 cagacgttcg atgattcgag cgagcgcgca cagagcgccg cgcgtgtcgc cgaactgcgt
      721 gccgaggtga agcgccgcgg cctcgacggg ttcgtcgtgc cgcgcgccga ccgccagcaa
      781 aacgaatatc tgcctgcaag cgaagagcgc ctggcctggc ttaccgggtt caccggttcg
      841 gccgggaccg ccgtgattct gggcgaccgt gcggcgctat tcgtcgacgg acgctacacc
      901 gtgcaggcaa acagccaggt tgacggcaat attttttcca tcgagcacct ggtcgaccac
      961 ccgccggagc aatggctcga gcaaaacctg aaaccgaatg cgaagcttgg ctacgatccc
     1021 tggctgcaca ccagcgacca cgttgaaaag ctgaaaaggg cttgcgcggt cgtgggagcg
     1081 gaactggttg cgacagatag caacccgatt gatgccctct ggcgggatcg ccctgctccg
     1141 ccagtcggcc cggtgacact cagggagatc aagctcgccg gcgaagctgc gcctgacaag
     1201 atcaagcgcg ttcgcgccga gctgaaaaag ctgcgagccg acgctcttct cgtatcggat
     1261 ccgcagaatg tcgcctgggc gttcaatatt cgcggcgcgg acgtcacgta tacgcccctt
     1321 gcgctcgcgt tcgcggtggt cccgctggaa ggcaggccag cgctctatgt cgagacggcc
     1381 aagctcagca acaatgttcg tcacgcgctg gaggaattca ccgacgtgcg cggaccggat
     1441 gatctcgccc gcgatcttga caggctcaag gataagacca tccggctcga ccaggcgacc
     1501 gcttccgagg ctttgacgcg gctgatcagc gaccacggcg gcaagccgca gcgcgggcca
     1561 gatccgatcg cttctttgaa ggccacgaag aaccacgccg aaatcgtcgg cagccgcgcc
     1621 gctcacaagc gcgatggcgt ggcggtggcg cgattcctgg cgtggctcga caaggaagcg
     1681 ccgtccggca agctgactga aatcgacgca gtcgctgcgc tcgaaagctt ccgccgcgac
     1741 accggcgcgc tcaaggacat ctcctttccc accattgccg gcgcgggccc gaatggcgct
     1801 atcgtgcact atcgcgttac gcgcgcgtca aaccggcgca tcggaatgaa cgagctcttc
     1861 ctgatcgatt ccggcgcgca atatgaagac ggcacaaccg acatcacgcg aacgatcgtc
     1921 gtcggcgagc cgagcgagga gatgcgcgac cgtttcacgc gcgtgcttaa gggccacatc
     1981 gccatcgcga ccgctgtgtt tcctgagaac acgaccggtg cgcagctcga cccgctggca
     2041 cgaacggcgc tgtggcaagc cggcctcgat tttgatcatg gaaccggcca cggcgtcggc
     2101 agctatctgt cggtccatga gggcccggca cgcatatcga agctcggcac tgtgccgctt
     2161 cggcgcggca tgatcctatc gaacgagcct ggctactaca aaacggccgc ctacggcatt
     2221 cgcatcgaga atctcgtgct ggtgatcgcc gcacccgagc ccgtcggcgc cgaaaagccg
     2281 ctcaacacct tcgagacatt gacgcttgcg ccgatcgacc gccgattgat cgacgcgcgc
     2341 atgctcagcc gcaaggagcg cgcctgggtc gacaactatc atgagcgcgt gcacgaggtg
     2401 ctcggcccgc tggtcgatgc gccgacgcgc aaatggctcg agaaggcgac gaaaccgttg
     2461 tagccagttg atcgcaaccg ttcgtccccg cgcaggcggg gacccagatc ttctcgaatg
     2521 accggcgggt agtcgttctc tggatgcccg ctttcgcggg cacgaacgga gaccgggcaa
     2581 ggcatgtcgc acaaaactcg ttccgttcgt ccccacgcaa gcggggaccg agccatggcc
     2641 gtcatggccg ggctagtccc ggccatccac gtctttagtg ctgcaaggct gaaaagacgt
     2701 ggatgcccgc gacaagcgcg ggcatgactg tggggcgggg cgactcgttc cgttcgtccc
     2761 cgcgcaggcg gggacccaga tctactcaaa tgccggcggg cactcgttct ctggatgccc
     2821 gctttcgcgg gcacgaacgg agaatgggca aggcatgtcg cacaaactcg ttccgttcgt
     2881 ccccgcgaac gcggggaccc agaccgctca gagaaaacga gtcacacacc ggtcagtttg
     2941 agccactcat cctcggtcaa caccgtcacg ccaagcttct tggcgtccgc cagcttcgag
     3001 ccggcgccgg gaccggcaac cacataatcc gttttcctgg aaactgagcc ggcggttttg
     3061 gcgccaaggc gctcggcctg ggccttggct tcctcgcgcg tcatcttctc caacgcgccc
     3121 gtgaacacta cggtcttgcc ggcaaccgcg gtgttcgtct tcggcttttc cgcatcgagg
     3181 atggtgacct gcttggtcag ccgctcgaca acgccccggt tatggctttc gccgaaatat
     3241 gccttcaccg cttcgataac ggtatcgccg atctgatcga gcgcgtccat ttcggcggcc
     3301 gcttccgcgt cgtccttggc gatcttaagg gcggcatcgt ggaaggcttt ccatgaaccg
     3361 aagccgcgcg cgagcgcaag cgccgttgtc tccccgacgt gacggatgcc gagcgcatag
     3421 atgaaccggt caagcgcgat cttgcgccgc gcctcgatcg cgttgaacag gttgcgcacc
     3481 gaggtttcgc cgaagccttc ttgctcgagc aagtcgctcc tgtgcttctt ttccaatgtg
     3541 aagatgtcgg ccggttcctt gacccattct ttgtcgaaga aaaattcgat ctgtttctca
     3601 cccaggcctt cgatatcgaa ggcacggcgc gacacgaaca gcatcagatg tt
//
LOCUS       DATDHO010000675         2637 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_280527, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000675 DATDHO010000000
VERSION     DATDHO010000675.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2637)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2637)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2637
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280527"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..254
                     /locus_tag="VIY07_12960"
     CDS             3..254
                     /locus_tag="VIY07_12960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEY6382700.1"
                     /translation="MARLMNDAAGVAQGVRREFDTLFRTQAERILRDLDVVQREEFEA
                     VKEMARLAREENEALKARIAALETKTQKPAKKAKDSATD"
     gene            406..1170
                     /locus_tag="VIY07_12965"
     CDS             406..1170
                     /locus_tag="VIY07_12965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEY6382701.1"
                     /translation="MATVQELKATARPKGGKGAARSARRSGKVPGVIYGENMPPVMVL
                     LDHDDLRKRIYAGRFLTTLYNLDVDGTKHRVIPRDFQLDAIKDLPMHVDFMRVSEGAT
                     IRVHIPVHVLNADQAPGVKRGGAVNIVTHTVQVICPADAIPESIDVDISGLDINYSKH
                     LNEVTLPPNIRVIGRPDMTLVTVVPPSGYAEEMKAAAEAAAAAAAAAAAAAAAGVAPA
                     AEGVAPSAAPGAAPGAAPAAGAAPAAAAAPAKTEKK"
     gene            1240..1851
                     /gene="pth"
                     /locus_tag="VIY07_12970"
     CDS             1240..1851
                     /gene="pth"
                     /locus_tag="VIY07_12970"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEY6382702.1"
                     /translation="MLLFVGLGNPGPKHASNRHNIGFMAVQAIARRHNLSPWRRRFQG
                     VAVEGNVANERTLLLLPGTYMNESGRAVAEAMHFYKLDPASIVVFHDEVDLQPAKVRV
                     KVGGSDAGHNGLRSISAHLGNDYKRVRIGIGKPDVKELVPSHVLGDFAKSEWAWVEAL
                     CDVIADNVPLLIEGKDSTFQNKIHLAMEAKGFDSRDDEPPPSK"
     gene            1875..>2637
                     /gene="ychF"
                     /locus_tag="VIY07_12975"
     CDS             1875..>2637
                     /gene="ychF"
                     /locus_tag="VIY07_12975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEY6382703.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTQTAAAQAANYPFCTIEPNIGE
                     IAVPDSRLDKLIVLGKSEQIVPTRITFVDIAGLVRGASKGEGLGNQFLASIREVDAIV
                     HVVRCFEDSDVTHVEGKVDPIADIETIETELMLADLDSLEKRIGNLEKKAKGNGEDAK
                     LAKETLDLVNRSLTLLREGKPARMVERKPEEEKLFHSLGLLTSAPVLYACNVDEAAAA
                     TGNDYSRIVEQRAGEEGAVAVVISAKIESEIATLPP"
BASE COUNT          550 a          783 c          822 g          482 t
ORIGIN      
        1 agatggcgcg tttgatgaac gatgccgctg gcgtggccca aggggtgcgg cgcgaattcg
       61 atacgctgtt tcgaacccag gcggaacgta tcctgcgcga tctggatgtg gtccagcgtg
      121 aggaatttga ggccgtcaag gagatggcgc gccttgccag ggaggagaac gaggcattga
      181 aggcgcgcat cgccgcgctg gagacgaaga cacaaaaacc cgccaaaaag gccaaggatt
      241 cggcgaccga ttagcccgac ccaaacaagg gcagattctt gccctttccg ggcgctgccg
      301 ctataacccg cccgttcgcg gcccccggca cccctggagg cttgccgcgt acgcgggcgg
      361 caaaatgccg ccttttccat tggcttagat gtaaagggat tgaagatggc gaccgtccag
      421 gaattaaagg cgacggcgcg tccgaaaggc ggcaaggggg ccgctcggtc tgcgcgtcgc
      481 tccggcaaag tgccgggcgt gatctacgga gagaacatgc cccccgtcat ggtcctgctc
      541 gaccatgatg atctgcgcaa gcgcatctat gcggggcgtt ttctcacgac gctctacaat
      601 ctcgatgtgg acggtacgaa gcaccgggtg atcccgcgcg atttccagct cgacgctatc
      661 aaggacctgc cgatgcatgt cgacttcatg cgcgtgtcgg aaggcgccac gattcgcgtg
      721 cacattccgg ttcacgtgct caacgcggat caggcacccg gtgtgaaacg cggaggtgcg
      781 gtcaacattg tgacccatac ggtccaggtg atttgcccgg ctgatgccat tcccgagtcg
      841 atcgatgtcg acatttccgg tctcgacatc aactactcga agcatcttaa cgaggtaacg
      901 ctgccgccca acattcgcgt catcggccgc cccgacatga cgctggtcac cgttgtgccg
      961 ccgtccggct acgcggaaga aatgaaagcc gccgccgagg ctgctgctgc cgctgctgct
     1021 gccgctgctg ccgccgccgc cgccggcgtt gcgcctgctg ccgaaggcgt ggccccgagt
     1081 gcagcgcccg gagctgcgcc tggtgccgca cctgccgccg gtgctgctcc ggcggccgcg
     1141 gccgcacctg caaagaccga gaagaagtga ggcggcgttc aagccgcctt gtcggcgtaa
     1201 cgcacattgc ggtagggcgg tctgacggcc gttgaagcca tgctgctttt cgtcggcctc
     1261 ggcaatcccg gccccaaaca cgcgagtaac cgccataata tcgggtttat ggcggttcag
     1321 gcgatcgcgc gtcggcacaa cttgtcgccc tggcgtcggc ggtttcaagg cgttgcggtc
     1381 gagggaaatg ttgcgaacga gcgaacgctg ctgttgctgc ccggcacgta tatgaacgaa
     1441 tccggtcggg ccgtggcaga ggctatgcat ttctacaagc tcgatccggc aagcatcgtc
     1501 gtattccatg acgaagtcga tcttcagccg gcaaaagtga gagtgaaagt cggcggcagc
     1561 gacgcaggcc acaacggcct gcgctcgatc agcgcccatc tgggcaacga ctacaagcgc
     1621 gtgcgcatcg gcatcggcaa accggacgtc aaggaactcg tgccctcaca tgtgcttggg
     1681 gatttcgcaa aaagcgaatg ggcttgggtc gaagcgcttt gcgatgtgat cgccgacaat
     1741 gtgccgcttc tcatcgaggg caaggactcg acgttccaaa acaagattca cctcgccatg
     1801 gaggccaagg gcttcgacag cagagacgac gagccgcctc cctccaaata gcaatgtaaa
     1861 gagaccatca aaccatggga tttaagtgcg gcatcgtcgg tttgccgaac gtcggcaagt
     1921 cgacgctctt taatgctctt acacagacag ctgccgccca ggccgctaac tatccgtttt
     1981 gcaccattga gccgaacatt ggcgaaatcg ccgtgccgga ttcacgtctg gacaagctga
     2041 ttgtcctggg gaagtcggaa cagatcgttc caacgcgcat tacgttcgtc gatattgccg
     2101 ggctcgtgcg gggtgcttcc aaaggggagg ggctcggaaa ccagtttctt gccagcatac
     2161 gcgaagtcga tgccatcgtg catgtcgtgc ggtgctttga agacagcgac gtgacgcacg
     2221 tggaaggcaa ggtcgacccc atcgccgaca tcgaaaccat cgaaaccgaa ttgatgctgg
     2281 ccgatttgga cagcctggaa aagcgcatcg gcaacctgga gaaaaaggcc aagggcaacg
     2341 gagaagacgc caagctggcc aaggagaccc tcgatctcgt gaaccgttcg ctgacgctgc
     2401 tgcgcgaggg taagcccgcg cgcatggttg agcggaagcc ggaagaagaa aagctgtttc
     2461 actctctcgg cctgctgacc tccgcgcccg tgctctatgc ctgcaatgtc gacgaggctg
     2521 cggctgcgac aggcaacgat tattcccgca tagtcgagca aagggccggg gaagagggtg
     2581 cggtcgccgt tgtgatctcc gccaagatcg aatcggagat cgccactttg ccgccag
//
LOCUS       DATDHO010000676         3846 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_31536, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000676 DATDHO010000000
VERSION     DATDHO010000676.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3846)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3846)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3846
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31536"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..922
                     /gene="truB"
                     /locus_tag="VIY07_12980"
     CDS             <1..922
                     /gene="truB"
                     /locus_tag="VIY07_12980"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEY6382704.1"
                     /translation="HGWIILDKPVGMTSTHAVSLVKRQFNARRAGHAGTLDPLASGAL
                     PIALGEATKTVPFVMDSRKLYRFTVRWGEERDTDDAEGRVVARSDLRPAREAIIALLP
                     SFTGTIDQVPPQYSAIKVEGERAYDLARDGEHVELAARPVEIGRLELVDVPDPDHAVL
                     EAECGKGTYVRSLARDLGRALGCFGHVNALRRAAVGPFGEKSMILLEQLEALCHRAAS
                     GEGSLADALMPVETALDDIPALAVGGADAARLQRGQAVLLRGRDAPNFRGTVYVTVSG
                     RLLALAELDRGEIVPKRVFNLAGLMGRAAR"
     gene            936..1205
                     /gene="rpsO"
                     /locus_tag="VIY07_12985"
     CDS             936..1205
                     /gene="rpsO"
                     /locus_tag="VIY07_12985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEY6382705.1"
                     /translation="MSVTAGRKAEVIKTYAKKPGDTGSPEVQVAILSERINNLTEHFK
                     THVKDNHSRRGLLKLVGQRRQLLDYLRRTNEASYKNLIEKLGIRR"
     gene            1472..3640
                     /gene="pnp"
                     /locus_tag="VIY07_12990"
     CDS             1472..3640
                     /gene="pnp"
                     /locus_tag="VIY07_12990"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEY6382706.1"
                     /translation="MFDMHRVELDWGGRKLTLETGRIARQADGAVLATYGETTVLATI
                     VAAKTPKEGVDFMPLTVNYQEKFFAAGRIPGGYFKREGRPTEKETLTSRLIDRPVRPL
                     FADGWRCDTQVIVTTLSHDLENDPDIVAMVAASAALTLSGVPFMGPVGAARVGFINNE
                     YVLNPQLDEMVESQLDLVVAGTNDAVLMVESEAKELSEDSMLGAVMFGHRHFQPVIEA
                     IIKLAEKAAKEPRELTLPDNAKLEQEILGLVEKDLRAAYSIASKQDRHKAVDAAKEKV
                     FEHFFPGGTDNPEYDQLRVAAVFKELEAKIVRWNILDTGRRIDGRDNKTVRPIVAEVG
                     VLPRTHGSALFTRGETQALVVATLGTAEDEQFVDALQGTYKETFLLHYNFPPFSVGET
                     GRIGSPGRREIGHGKLAWRAIHPMLPTPAEFPYTIRVVSEITESNGSSSMATVCGSSL
                     ALMDAGVPLKRPTAGIAMGLILEDQRYAVLSDILGDEDHLGDMDFKVAGTEQGVTSLQ
                     MDIKIAGITEEIMKVALAQAKDGRMHILGEMGKALTAARAELGEHAPRIEMFKIPTDK
                     IREVIGTGGKVIREIVEKTGAKINIEDDGSVKVASASGESIKAAINWIKSIASDPEVG
                     HIYEGTVVKVMDFGAFVNFFGAKDGLVHISQLAPRRVNKVTDVVKEGDKVKVKLLGVD
                     ERGKVRLSMKAVDQATGEDIEGKQRAEGGEQPQAAQGGAE"
BASE COUNT          765 a         1190 c         1224 g          667 t
ORIGIN      
        1 ccacggctgg atcattcttg acaagccggt cgggatgacc tcgacgcacg ctgtcagcct
       61 cgtgaagcgc cagttcaatg ccagacgcgc gggccatgcc ggcacgctcg acccgcttgc
      121 ctcgggcgct ttgccgatag ccctgggcga ggcgacgaag acggtcccct tcgtgatgga
      181 cagccgcaag ctgtatcgct tcacggttcg ctggggcgag gagcgggata cggacgacgc
      241 cgagggccgc gtggttgcgc gcagcgatct aaggccggcg cgagaagcca tcatcgccct
      301 cctgccatcg ttcaccggaa cgattgatca ggtgccgccg cagtactccg ccatcaaggt
      361 cgagggcgag cgtgcatatg acctcgcccg cgatggcgag cacgtggagc tcgccgcccg
      421 acccgtggaa atcggccggc tggagttggt cgatgttccc gaccccgatc acgccgtatt
      481 ggaggccgaa tgcgggaaag gcacttacgt gcgctcgctc gcccgcgatc ttggccgtgc
      541 tttaggctgt tttggccacg tcaacgcgct gcgccgagct gcagtcgggc cattcggcga
      601 aaaatccatg attttgctgg aacaattgga ggctctatgc catagagccg cgtccggcga
      661 gggtagcctc gcggatgctc tgatgcccgt tgagaccgcg ctggacgaca tcccggcgct
      721 ggccgtcggc ggggcagacg cggcaaggct tcagcgaggc caggccgtct tgttgcgcgg
      781 acgggacgca cccaatttcc gcggcacagt ctatgtcacg gtatcgggcc gtttgctggc
      841 ccttgccgaa ctggatcgtg gcgaaatcgt ccccaagcgc gtgttcaacc ttgccggcct
      901 gatgggcaga gccgcgcgat aagaaaggac gaccgatgtc ggtgaccgcc ggccgcaagg
      961 ccgaagtgat aaagacgtat gccaaaaagc ccggagatac cgggtcgccg gaagtgcagg
     1021 tggcgatcct gtccgagcgc atcaacaatc tcaccgagca tttcaaaact cacgtcaagg
     1081 ataatcattc ccgacgtggg ctgctcaagc ttgtcggcca gcgccgccag ctgctcgatt
     1141 atctgcgtcg caccaatgag gcgagctaca agaatctaat cgagaagctc ggcattcgcc
     1201 gatgatttat tccgtgcagg gcgtccaagc cctgtgcgtt tcgtgcagcg gatgcgcatc
     1261 gcgcgttcgc tcgttaagcc ggcggcgatg ggcgcggccg gcaatttggc aagagctgac
     1321 aaggatcgct cttgcaacaa ggcaaggttc gaaatgccat ggcaggatcg ccagacgctg
     1381 ttgcttcccg caccggaatg tgcgcgccgc agcttctcgc cgtcttgcgc atggctttcg
     1441 gggctcgccg aaaccatgag agaaagacac aatgttcgat atgcatcgag ttgaactcga
     1501 ttggggtggg cgcaagctaa ccctggaaac cggcaggatc gcgcggcagg ccgatggggc
     1561 cgtgctcgcc acctacggcg agaccaccgt gctcgccact atcgtggcgg ccaagacgcc
     1621 gaaggaaggc gtcgacttca tgccgctgac ggtcaattac caggaaaaat tcttcgctgc
     1681 cggccggatt cccggcggct acttcaagcg agaaggccgc ccgacggaga aagagacgct
     1741 gacctcgcgt cttattgacc ggccggtgcg tccgctgttc gccgacggct ggcgttgcga
     1801 cacgcaggtc atcgtcacca cgctgtcgca cgatcttgag aatgatcccg acatcgttgc
     1861 catggtcgcg gcctccgccg cgctcaccct gtccggcgtc ccgttcatgg gccccgtcgg
     1921 cgctgcgcgt gtcggcttca tcaacaacga atacgttctt aatccgcagc tagacgagat
     1981 ggtggagagc caactcgatc tggtcgtcgc tgggactaac gatgcggtcc tgatggtgga
     2041 atcggaggcg aaagagctgt ccgaggacag catgctgggc gcggtgatgt tcggccaccg
     2101 gcatttccag ccggtcatcg aagccatcat caagctcgca gaaaaggcgg ccaaggaacc
     2161 ccgcgagctg acgctccccg acaacgccaa gctcgagcag gaaatcctcg gcctggtcga
     2221 aaaggatctc cgcgcggcct attcgatcgc ctcgaagcag gatcgtcaca aggcggtgga
     2281 cgccgcgaaa gaaaaagtgt tcgagcactt cttcccaggc ggcacagaca accccgaata
     2341 cgaccagctg cgcgtggcgg ccgtattcaa ggagctcgaa gccaagatcg tgcgctggaa
     2401 cattcttgat accggcaggc gcatcgatgg ccgcgacaac aagaccgttc gcccgatcgt
     2461 ggcggaagtc ggcgttctgc cgcggaccca cggttcggcg ctgttcacgc gcggcgagac
     2521 ccaggcgctc gtggtagcga cgctcggcac tgccgaagac gagcagttcg tcgatgccct
     2581 gcagggcacg tacaaggaga cgttcctgct gcactataac ttcccgccct tctccgtggg
     2641 cgaaaccggc cgcatcggct cgcctggccg ccgcgagatc ggccacggca aacttgcctg
     2701 gcgggcgatc cacccgatgc tgccgacacc ggccgagttt ccgtacacga tccgtgtcgt
     2761 ttccgaaatc accgaatcca acggctcgtc gtcgatggct actgtctgtg gttcctcgct
     2821 ggcactgatg gatgcgggag tcccgctgaa gcggccgacc gccggcatcg ccatgggtct
     2881 cattctcgaa gaccagcgct acgcggtgct ctccgacatt cttggcgatg aggaccacct
     2941 tggcgacatg gacttcaagg tcgccggcac tgagcagggc gtcacgtccc tgcagatgga
     3001 catcaagatc gccgggatca ccgaagagat catgaaggtc gcgctcgcgc aggcgaagga
     3061 cggccgcatg catattctgg gtgagatggg caaggccctc accgcagcgc gggccgaact
     3121 cggcgagcac gctccgcgaa tcgagatgtt caagattccg accgacaaga tccgtgaggt
     3181 gatcggcacc ggcggcaagg tgatccgcga gatcgtcgaa aagaccggcg ccaagatcaa
     3241 catcgaggac gatggctcgg tcaaggttgc ctcggccagc ggcgaatcca tcaaggcggc
     3301 gatcaactgg atcaagtcga tcgcctcgga tccggaagtg ggccacattt acgagggcac
     3361 cgtggtgaag gtcatggact tcggcgcctt cgtgaatttc ttcggcgcca aggacgggct
     3421 ggtgcacatc agccagctcg cgccacgccg ggtgaacaag gtcaccgacg tcgtcaagga
     3481 aggcgacaag gtgaaggtca agctcctcgg cgtcgacgag cgcggcaaag tacgtctctc
     3541 gatgaaggcg gtcgatcagg ccaccggcga ggacatcgaa ggcaagcaac gcgctgaggg
     3601 cggcgagcag ccgcaggccg cgcaaggcgg cgccgagtaa ccagtcctta tggggcggga
     3661 ataacgcgca agaccctcct cgtcatgccc ggcccttgtg ccgggcatcc acgcctttct
     3721 ctgtcgaagt caagacgtgg atggccggga caagcccggc catttatttc gttttgagga
     3781 aatcgatcac gagccggctc acagcgtccg gtgcctctcg cgtcggaaaa tggccgatgc
     3841 catcca
//
LOCUS       DATDHO010000677         8026 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_428803, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000677 DATDHO010000000
VERSION     DATDHO010000677.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8026)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8026)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8026
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428803"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..692
                     /gene="panB"
                     /locus_tag="VIY07_12995"
     CDS             <1..692
                     /gene="panB"
                     /locus_tag="VIY07_12995"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEY6382707.1"
                     /translation="STIPATMDMMVMHGQAVRRGAPNTFLLGCMPYQSYNTVDRALVN
                     ATRFMQESLCDAVKPQGGKSQAHILRALVDAGIPTASHIGLTPHTIAMFGGFKIQGRT
                     ADAAMKILEDALAIEDAGCFMLEFEAVPAKIAKLISEQLSIPTIGIGAGVGCDGQILL
                     CYDLLGVFTDFKPKFTKRFAKLTEVAVAGIRQYVKEVKEGSFPDDEHSYTVNDTEYEK
                     FAAMVAKRKQI"
     gene            754..1398
                     /locus_tag="VIY07_13000"
     CDS             754..1398
                     /locus_tag="VIY07_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010687188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY6382708.1"
                     /translation="MPRVDTLTEQAYRLIEEQIVILRLRPGDVLSEQMLSATFKIGRT
                     PIREALQRLAREGLITVLPRKGILVSDINPRSQLLVLEVRREIERLLSRTGAERATKE
                     QRAELQDIAQGMDRAAKTNNDLEFMRLDRDLNRLMIECAHNDFAARSMKLLQGLSRRF
                     WYMHYREAADLPLCARLHANQARAIAQGNGEAAARASDKLMDYVETFTRATVTV"
     gene            1404..1703
                     /locus_tag="VIY07_13005"
     CDS             1404..1703
                     /locus_tag="VIY07_13005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6166 domain-containing protein"
                     /protein_id="HEY6382709.1"
                     /translation="MKTYEGKRTIDGLVVTVDGKRLDEHYDVKRFTRYGFEWTYEGDS
                     PQQLALAILYDFLGDKERAIALSDRFMKEVVANLDNDWKLTGPEIEAFLQSKAAA"
     gene            1790..3067
                     /locus_tag="VIY07_13010"
     CDS             1790..3067
                     /locus_tag="VIY07_13010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382710.1"
                     /translation="MAISRRKLLASAAAVGAVSVSGGVFAPAIAQNKPLRIGVLAPRA
                     GIAAAPGLNGIRATQWAVDGFNAKDGIGGRKVELVIEDESTPKDTIERFSKLVQQEKV
                     DCVQGIISTGVGLALGPVVEEARALTIYWDGTTQDGVDEKIPNPRYLFRSTDNECEAV
                     MSSLLSIKYWKGKFATVAGINPDYSYGRNNMAAFVAMLKRFNIDHQVVTEQWPKVGTM
                     DLTSHVAALKAAKPDLIFSSLLFADLPVFMKQAHAAGLTEGTKLVFPAAGWQHTLMKK
                     EFTPEGMLFGHNTLYFANPNASPLAKEFVAWYEKTYKDYPEWEADRAYFAIASYKAAV
                     EKAMKAKNGAWPSQDDVIEALVGLSIESLGGKSSWRKDHIADQTFVQGLTTHKNNYDF
                     VTLGTFESMYSTELQKPPGANFWEWLKTAQFKT"
     gene            3086..3967
                     /locus_tag="VIY07_13015"
     CDS             3086..3967
                     /locus_tag="VIY07_13015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382711.1"
                     /translation="MSAFANILAGGVFHAAVLFLVAAGLQLVFGVQKIVNLACGSFYA
                     LGAYFGITFISYAIRLGISPWLIFPGLIVSGILLGFIGPPIERLLRTVYSRDESFSLL
                     LTFALVLIFQDVFKFFWGANPRSLDSAYLIYGTLSGGDFSVPVYNLLVIAAAIAIAAG
                     LGLFLQRTKYGRLLRATAENRAMAEALGVDVRRIYAAVFTLGAVLGTTAGALVVPTAA
                     ASLDMAIEFVIEAFAVVVIGGLGSMRGALAGALIVGLIRALAIVFYPELEVLAIYVIV
                     IGVLIFRPIGLFGRALA"
     gene            3964..4932
                     /locus_tag="VIY07_13020"
     CDS             3964..4932
                     /locus_tag="VIY07_13020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382712.1"
                     /translation="MTITPAAMVASIGAAGLALLPYVAPPYYAGLMISFFGYAIALLG
                     FNLLFGYTGLLSFGHAMFLGLGAYGAAVMAGTLGIKHFEIVLLAVVIASALIALPIAL
                     LCARYVGIFFGMLTLAFGMLFYSFLFKFYHLTGGDSGMRVPRMNILGLAFERYNKIEF
                     LAGPFYYYCLGLLVIAGFLMWRIVHSPFGLHLQALRDNARKAEYLGVHVRRFRVAAFV
                     ISAAFGAVGGAILGFRVGLADPELVYWTHSGQLVFMAVLGGFSNFFGPIIGALTYTLL
                     QDQLQSLTEYWRSMLGIILALIVIGFPEGVAGLAVDLRRRLARRTA"
     gene            4929..5690
                     /locus_tag="VIY07_13025"
     CDS             4929..5690
                     /locus_tag="VIY07_13025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382713.1"
                     /translation="MSPLLETRNVSKSYGVFSALENVSMAVGDGELVSVVGPNGAGKT
                     TLVNLLTGLLSPTSGEVFFMGKNIAGVGPVALADQGLARAFQLIQIFPKLTVEETIAA
                     AVVSRQKKRWRLLSRLSEDAEIHEQVGKVAEIFGLSNRLDTLAAALSQGEKKLLDVAS
                     AFALDPQVILFDEPTSGVSTADKHSIMKTLLAAAKLAGVRGIVLVEHDMDLVSAYSTR
                     IIALAEGRVLADLPPKEFFADPHLIATVIGKRRAH"
     gene            5690..6418
                     /locus_tag="VIY07_13030"
     CDS             5690..6418
                     /locus_tag="VIY07_13030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6382714.1"
                     /translation="MLAVHDLIVDIEGSRVLRRVSFAVKEGELVYLVGRNGAGKTTAF
                     RSIMGFRKALSGSITFEERNLIGLRPFQIARLGIGFAPEESEVFGELTVAENIALPTW
                     TRTDGRTAAERIDEAYNVFPNLRRYIDRSGQALSGGERKMLSIARALALGPKLLLLDE
                     PTEGLSPVVIPSIIEGLSNIRAFGHAIFIAESNIHHVPDFADRLYVIERGEIIFAGRP
                     EDARRNPAVGRIIEGVGPLPSAAD"
     gene            6512..7282
                     /locus_tag="VIY07_13035"
     CDS             6512..7282
                     /locus_tag="VIY07_13035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEY6382715.1"
                     /translation="MINQRQIDFRQEYRSRIIGWYDGYFHIAIIYAMGAAAFYIYIQH
                     IHNVSWLEWLTVPLTFLFTNVFEWAVHKYVMHRPVNIKGLRAIYERHTLNHHQFFTDE
                     EMRFRDHKDWRVTVFPPYALVVFILMSLPMAIILGMIFSSNVGWLFMSVTTGMYLIYE
                     FMHFCCHVDENWFVRHCPFVNTLRRHHTAHHNARLMMETNMNLTFPIADWLFGTSDLD
                     RGLIGTLLNGYETRYLKTNLRGHPRRPDDAAVAPVGSV"
     gene            7303..7491
                     /locus_tag="VIY07_13040"
     CDS             7303..7491
                     /locus_tag="VIY07_13040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382716.1"
                     /translation="MPNDVKAMVSALSLIVAAVLAYWSGSPIRPEFSTYIMVTAVFMV
                     LAMWIFPEAGAKNRDARH"
     gene            complement(7516..7923)
                     /locus_tag="VIY07_13045"
     CDS             complement(7516..7923)
                     /locus_tag="VIY07_13045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382717.1"
                     /translation="MNNIRPWILASTVLATLTLCVQATTAKQSSIEDKVLSAVQQPSV
                     DNGVEIGSQLSRMRSLTLDPGSAIILRGDKSRPTLVHVIKGTLTSRPQDMPEVVLHAG
                     DGYAGIEDSECLLENTGSEPAEFIWLPVYRYTP"
BASE COUNT         1590 a         2266 c         2341 g         1829 t
ORIGIN      
        1 ggagcaccat ccctgcgacc atggacatga tggtcatgca cgggcaggcc gtgcgccgcg
       61 gtgcgccgaa tacatttctg ctcggatgca tgccctacca gagctacaac accgtagatc
      121 gcgcgctcgt caacgcaacc cgcttcatgc aggaatctct ctgcgacgcc gtcaagccgc
      181 agggcggcaa atcccaggcg catatcttgc gcgcgctggt ggacgccggg attccgaccg
      241 cctcgcatat cgggctcacc ccgcatacca ttgccatgtt cgggggattc aagattcagg
      301 gtcgcaccgc cgacgctgcc atgaaaattc tggaggacgc actcgccatc gaagatgcgg
      361 gctgcttcat gctggaattt gaggcggtgc ctgcaaaaat tgcaaaactc atctcagagc
      421 agctgagcat accgactatc ggaattgggg caggggtcgg ctgcgatggc cagatcctgc
      481 tttgctatga cctcctcggc gtattcaccg acttcaagcc caagttcacc aagcgctttg
      541 ccaaattgac ggaagtcgca gtcgcgggca tccggcagta cgttaaagaa gtgaaggagg
      601 gctcattccc ggacgacgaa cattcctaca ctgttaatga cacagaatac gaaaagtttg
      661 ccgcgatggt cgcgaaacga aagcagattt gacgtggcgc gaacacaaac cagtgccgtg
      721 cggaggagcg ctccgaaaac cggcaaaagg ccgatgcctc gggtcgatac gctgaccgag
      781 caggcctacc gtttgatcga agagcagatc gtcattttgc ggcttaggcc cggcgatgtg
      841 ctgtccgaac agatgctgtc ggcgaccttt aaaatcgggc gcacgcccat tcgcgaggcc
      901 ctgcagcgac tggctcggga aggtctcatc acggttttgc cgcgcaaggg gattctggtg
      961 tcggacatca atccgcgcag tcaactgctc gtgcttgaag tccgccgcga aatcgagcgc
     1021 ttgttaagcc gaacaggagc cgagcgtgcc accaaggagc agcgcgcgga attgcaggac
     1081 attgcacagg gcatggaccg tgcagcgaaa accaacaacg atttggaatt catgcggctt
     1141 gatcgcgacc tcaaccgcct gatgatcgag tgcgcccata atgattttgc ggcgcgctcg
     1201 atgaagctct tgcagggctt atcgcgccgc ttctggtaca tgcattatcg tgaagccgcc
     1261 gacctcccgc tgtgcgccag gctgcatgcc aatcaggcgc gcgcgatcgc gcaaggcaat
     1321 ggcgaagcgg cggcgcgggc cagcgacaag ctgatggact atgtcgaaac gttcacccgc
     1381 gccacagtca cggtctgacg atcatgaaaa cctatgaggg gaaacgcaca attgacgggt
     1441 tggtcgtgac cgtcgacggc aagcgcctcg acgagcacta tgacgtcaag cgcttcacaa
     1501 ggtacggctt tgagtggacc tatgaagggg acagcccaca gcaattggcc cttgcgatcc
     1561 tttacgactt tctcggcgac aaggagcgcg cgatcgcgct ttccgaccgt ttcatgaaag
     1621 aagtggtggc caatctcgac aacgactgga agttgaccgg accggagatc gaagcgtttc
     1681 tgcaaagcaa ggccgcggca tagtcgtcgc tcgcttgttg gtgacatgcg tctgatatat
     1741 catcgtcgga aatcataaga acaaaccaga gcaaaaaggg agggatgtca tggcaatttc
     1801 tcgccgaaag ctgcttgcgt ccgccgcggc ggtgggcgcc gtgtcggtgt cgggtggtgt
     1861 gttcgctccg gcgatcgcgc aaaacaagcc acttcgaatt ggcgttctcg cgccgcgcgc
     1921 tggaatcgcc gcggcgccag gtctcaatgg cattcgcgcc actcagtggg ctgtcgatgg
     1981 ttttaacgcc aaggacggca tcggcggccg caaggttgag ctggtgatcg aggatgagtc
     2041 gacgccgaaa gatacgatcg agcggttcag caaacttgtg cagcaggaaa aggtcgactg
     2101 cgtgcagggg attatttcca ccggcgtcgg cctggccctt ggtcccgttg tcgaagaggc
     2161 ccgcgcgctg acaatctatt gggacggcac gacgcaggat ggcgtcgacg agaaaattcc
     2221 caatccgcgg tacctgttcc gatcgaccga taacgaatgc gaggcagtca tgtcctcgct
     2281 gctatcgatc aagtattgga agggcaagtt tgccaccgtt gccggcatca accccgatta
     2341 ttcatacggg cgcaacaata tggcggcgtt tgtcgccatg ctgaaacggt tcaatatcga
     2401 ccaccaggtc gttaccgagc aatggcccaa ggtcggcacc atggatctca ccagccatgt
     2461 cgccgcgcta aaggccgcca aacccgacct catcttctcg tcgcttttgt ttgccgatct
     2521 gcccgtgttc atgaagcagg cgcacgccgc agggttgacc gaaggcacca agctcgtatt
     2581 cccggccgcc ggctggcagc acacgctgat gaaaaaagaa ttcactccgg aaggcatgct
     2641 gttcggccac aacacccttt atttcgcaaa tcccaacgct tcgcccttgg cgaaggagtt
     2701 cgtcgcctgg tacgaaaaaa cctataaaga ctatccggag tgggaagccg accgggccta
     2761 tttcgccatc gcttcctaca aggcggctgt tgaaaaggcg atgaaggcca agaatggggc
     2821 gtggccgtcg caggacgacg tcatcgaagc attggtcggc ctgtctatcg aaagtcttgg
     2881 cggcaagagt tcgtggcgca aggaccacat cgccgatcag acttttgtgc agggcctcac
     2941 cacgcacaag aacaattatg atttcgtgac gctcggcacc tttgagagca tgtattccac
     3001 cgagttgcaa aagccgccgg gagcaaattt ctgggagtgg ctcaagaccg cccaattcaa
     3061 gacctgatac ggcccaccgg atcggatgtc cgcatttgca aatattctgg ccggcggcgt
     3121 gtttcacgcc gccgtgctgt ttctggttgc tgccggcctg caactggtct tcggcgttca
     3181 gaaaatcgtc aatctcgctt gcggatcgtt ctacgcgctc ggcgcctatt tcggcatcac
     3241 attcatcagt tacgcaatcc ggctcggcat atcgccgtgg ctgatttttc ccggtctgat
     3301 tgtctctgga attttgctcg gatttatagg tccgccgatc gagcgcttgt tgcgcacggt
     3361 ctactcgcgc gacgaaagct tttcgcttct ccttactttt gcactggtgt tgattttcca
     3421 ggacgtgttc aagttcttct ggggcgccaa tccgcgatcg cttgacagtg cttatctcat
     3481 ctacgggacg ctgagtggcg gagatttcag cgtaccggtc tataacctgt tggtcatcgc
     3541 agcagcgatc gccattgcgg cgggactcgg tcttttcctg cagcgaacaa agtacggccg
     3601 gctgttgcgg gccacggcgg aaaatcgtgc catggctgag gcgctcggcg tcgacgtacg
     3661 acgcatctat gcggccgtat tcaccctcgg tgccgtcctg ggaacaaccg cgggtgcgct
     3721 cgtggtgccg actgcggctg cttcgctcga catggcgatt gagttcgtga tcgaggcctt
     3781 tgcggtcgtg gtcatcggtg gtcttggctc gatgcggggc gctcttgccg gcgcgctgat
     3841 cgttggactc attcgtgcgc tggccattgt cttttatccc gaactggaag tgctcgcgat
     3901 ctatgtaatc gtgattggcg ttctgatctt tcgtccgatc ggattgtttg gcagggcgct
     3961 ggcatgacca tcactccggc ggcaatggtg gcctcgatag gagcggcggg gctggcgctt
     4021 ttgccgtacg tcgcgccgcc ttactacgcg ggcttgatga tctcgttctt cgggtacgcc
     4081 atcgcattgc tcggttttaa tcttttattc ggctacacag gcctcttgtc gtttggccac
     4141 gccatgtttc tcggtcttgg cgcctatggc gccgcagtca tggccggaac cctgggaatc
     4201 aagcacttcg aaatcgtgct tctcgccgtg gtcattgctt ccgccttgat cgcgctgccc
     4261 atcgcgcttc tatgcgcgcg ttacgtggga attttctttg gcatgttgac ccttgccttt
     4321 ggcatgctgt tctactcgtt cctgttcaag ttctatcacc tcaccggggg cgacagcggc
     4381 atgcgcgtgc cgcgcatgaa tattctgggg cttgcgttcg aacgctacaa caagatcgag
     4441 tttcttgctg ggccctttta ctattattgt ctcggcctgc tcgtgatcgc cggctttttg
     4501 atgtggcgaa tcgtgcattc gcccttcggg ctgcatttac aggccctgcg cgacaacgcc
     4561 cgtaaagccg aatatctcgg cgtgcacgtg cgccgctttc gcgtcgccgc attcgtcatc
     4621 tcggccgcgt tcggcgccgt cggcggtgct atccttggct ttcgcgtcgg tctggcggat
     4681 ccggagttgg tttattggac ccactccggc cagcttgtgt ttatggcagt gcttggtggc
     4741 ttttctaatt tttttgggcc catcatcggg gccctgacct acactctatt gcaggatcaa
     4801 cttcagtcgc tgactgaata ttggcggtcg atgctcggca tcatccttgc gctcatcgtg
     4861 atcgggtttc ccgagggggt tgccgggttg gcggtcgatc tgcggcggcg cttggcgcgg
     4921 agaaccgcat gagcccgctg ctcgagacgc gcaatgtgag caagtcctat ggcgtgttca
     4981 gcgctcttga aaacgtgagc atggccgtcg gcgatgggga attggtttct gtcgtcggcc
     5041 cgaatggagc cgggaagacg acactggtca atcttctgac cggcctgttg tcgccaacat
     5101 cgggcgaagt tttcttcatg ggcaagaata ttgccggcgt cggccccgtt gcgcttgccg
     5161 atcaggggct ggctcgcgcc ttccagctca tccagatttt cccaaagctg actgttgagg
     5221 aaacaatcgc cgctgcggtc gtgtcgcgac agaaaaagcg ctggcggttg ttgtcacggc
     5281 tgtccgaaga cgcagaaatc cacgagcagg tcggcaaggt tgcggagatc ttcgggttga
     5341 gcaatcggct cgatactctt gctgctgcgc tttcgcaagg cgagaaaaaa ttgcttgatg
     5401 tcgcctccgc tttcgccctc gatccgcagg ttattctgtt tgacgagcca acgtccggcg
     5461 tttcaacagc cgacaagcat tccatcatga aaacgctcct tgcggccgca aaacttgccg
     5521 gagtcagggg gattgtgctg gtcgagcacg acatggatct ggtgtctgcg tattcgacgc
     5581 ggatcatcgc tttggccgaa gggcgggtcc tggccgatct gccaccgaag gaattcttcg
     5641 ccgatccgca tctgatagcg accgtcatcg gcaagcgcag ggcgcattaa tgctggcagt
     5701 ccacgatctc atcgttgaca tcgagggcag ccgtgtcctg cgcagggttt cctttgcggt
     5761 gaaagagggc gagctcgtct acctcgtcgg gcgtaacggc gccggcaaga ccaccgcatt
     5821 ccgcagcatc atgggtttcc gcaaagcgct ctccgggtcg atcaccttcg aggaacgcaa
     5881 tctcatcggg ttgcgcccct ttcagattgc gcggctaggc attggtttcg cgcccgaaga
     5941 gagcgaagtg tttggcgaac tgacggttgc tgaaaacatc gctctgccga cctggacccg
     6001 gaccgatggg cggaccgcgg ccgagcgcat cgatgaagca tacaacgtgt ttccgaacct
     6061 gcgacgctac atcgatcgca gcgggcaggc gctgtccggc ggtgagcgca agatgttgtc
     6121 gatcgctcgt gcgctggcgt tggggcccaa gctgttgctg cttgatgaac ctaccgaagg
     6181 tctttcaccg gtggtgatcc catcgatcat cgaggggctg tcgaatatcc gggccttcgg
     6241 gcacgcgata ttcatcgccg aatccaacat ccaccacgtt cccgattttg ccgaccggct
     6301 ctatgtcatt gaacgcggtg aaataatttt cgcgggcagg ccggaggatg cccggcggaa
     6361 cccggcggtc ggacgcatca tcgaaggcgt tggccccttg ccctcggcgg ccgattgaac
     6421 agggatctcg cctgtgatag atgtgtgata tatcagaaac gcgcgccgaa actaccgatg
     6481 accaaccggt ctcgcgggca ggagcatcaa gatgatcaat cagcgacaaa tagattttcg
     6541 gcaggagtac cgttcccgaa ttatcgggtg gtatgacggc tatttccata tcgcgatcat
     6601 ctatgcgatg ggcgccgcag cgttctacat ttatatccag cacattcaca acgtgtcatg
     6661 gctggagtgg ctgaccgtcc cgctcacgtt tttatttacc aatgttttcg agtgggccgt
     6721 ccacaaatac gtcatgcacc ggcccgtcaa tatcaagggt ctgcgcgcga tctatgagcg
     6781 gcatacgctc aatcaccacc agtttttcac cgatgaggaa atgcgctttc gcgaccataa
     6841 agactggcgc gtgacagtgt tcccacccta tgcactggtt gtgttcattt tgatgtcgct
     6901 gccaatggcc atcattctag gaatgatctt ttcgtcaaat gtgggctggc tgttcatgtc
     6961 agtgaccaca ggcatgtacc tcatctacga gttcatgcac ttctgttgcc atgtcgatga
     7021 aaattggttc gtgcgccact gtcccttcgt gaacactttg cggcgccatc acactgcgca
     7081 ccacaacgcc aggctgatga tggaaaccaa catgaatctg acgttcccga ttgcggactg
     7141 gctgttcgga acgtccgacc tcgatcgcgg actgatcggg acactgctta acggctacga
     7201 aacgcgttat ctgaaaacga acttgcgggg ccatcctcgg cggcccgacg acgcagcggt
     7261 ggcgccagtt ggctcggtct gatcagctcc aaggagactg ctatgccgaa tgatgtcaaa
     7321 gccatggtct ctgcgctttc tttaattgtc gccgcggttt tggcttattg gagcgggtcg
     7381 ccgattcgac cggaattctc cacgtacatc atggtgactg ctgtgttcat ggtgctcgca
     7441 atgtggattt tccccgaggc cggcgcaaag aatcgcgacg cgcgccattg atcgaatttg
     7501 aacaggcggt caaaattacg gcgtgtatcg ataaaccggc agccagataa attcggctgg
     7561 ttcgctgccc gtattctcca atagacattc gctgtcttcg atgcctgcat agccatcgcc
     7621 ggcgtggaga accacttcag gcatatcttg cggacgcgat gtcagcgtgc ctttgatcac
     7681 gtgaacgagc gtgggacgac tcttatcacc acgcaagata atcgcactgc ctgggtccag
     7741 tgtgagcgac cgcattctgg ataactgtga gccgatctcc acgccgttgt cgacggaggg
     7801 ctgctggacc gcactaagga ctttgtcctc tatcgaactc tgtttggccg ttgttgcctg
     7861 aacgcaaagc gtgagggtgg caaggacggt cgaggcgaga atccaaggtc ggatattgtt
     7921 catgaatcga ttcccaattt ctcaagatcg gcaacggtac gcaggcacgg cgcctatttt
     7981 cctatttttg gaccgcagcg cttaacggca tctgagggta aagcaa
//
LOCUS       DATDHO010000678        15099 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_280678, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000678 DATDHO010000000
VERSION     DATDHO010000678.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 15099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15099
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280678"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(22..1641)
                     /locus_tag="VIY07_13050"
     CDS             complement(22..1641)
                     /locus_tag="VIY07_13050"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY6382718.1"
                     /translation="MEFLVRAVTRRNIFAILVGAVVAGAPMFALNFWLEGLIDRKGEA
                     EVGTAAKRAIALAEARVKDAVGALDGLAARGVNACEPAQVEAMRYAAFSTIPVKEIAI
                     VGPDAETLCTDLGLPLGERTMLSSELLVGAAGYWLDIIVLPAGERMVRLRRQAGAGPN
                     GVAALIPTTLFLPQVSTQGGPFSAYARIVTRQGTVIAEVGDRAKGDDSSNFVADSKSE
                     KFGFDVHIVTSRTRIAAEHENLKWLGFFAAGGIMMAAAGIVLLMPRRMPPNPMTEIEY
                     ALEAGEFIPYYQPVVDIRTGQLRGAEVLVRWRKPDGTLVLPGSFIPLMESSGFIRDLT
                     RNLMQKVCEEAGASIGRRPDLRISFNFAGKLFSEPTIVKDVRNIFASSPIKFSQVVLE
                     VTERDPIENFTETRQTIAALQGLGVRIAIDDVGTGHSGLSYMLKLGVDIIKIDKMFVD
                     AIGTDRNSTTIVETLVDLARNMRMDVVAEGVENFEQVMHLRSLGVRSAQGYVFAPPLP
                     GSSFLQLVEAIDPLQPAAADATAGVGRRLRA"
     gene            1822..2664
                     /locus_tag="VIY07_13055"
     CDS             1822..2664
                     /locus_tag="VIY07_13055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6382719.1"
                     /translation="MNIRSVLLAAFALLATTPVNASAQERIEIFDAHLHYNQEPTPFY
                     SLEQIRDVFRRNGITGIIANSRPNKGTLELTDAKWPELRVVPFIRPYRVRSDIQTWFN
                     DPSIFELIKDEYARGFYRGIGEFHIYGKAAESEWVKKIVDFAVERNLYLHAHCDEEAL
                     LILFRHNPKARIIWAHTGFSVPAARVAQLLDQHKDALWGELSYRGGITGADGKLTSDW
                     RNLFERYSDRFLLGSDTWINERWFGYDTIFKEYRNWLAQLSPEQARRIASGNALRLFD
                     QRAQ"
     gene            2690..3610
                     /locus_tag="VIY07_13060"
     CDS             2690..3610
                     /locus_tag="VIY07_13060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007703703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HEY6382720.1"
                     /translation="MSFFPGKDPEAGNSYRCDAISQVIVPRTVDLGDFAVRRALPSAR
                     TRMVGPFIFFDHFGPAEFRAGNGLDVRPHPHIGLATVTYLFDGEIMHRDSLGTAVAIR
                     PGEVNWMTAGRGIVHSERTRPERRVDHEPIHGLQMWVALPAAREEMEAAFAHHDTAEF
                     PIVKDNGKNVRVVVGSLYGVSSPVPVVHETIFGDVRLQAGSRLPLDAGHEERAIYVID
                     GVVDIAGDRFEAGRLLVFKPGDSVTIVAVNDAHFVVLGGAPMDGPRHIWWNFVSSRKE
                     RIEQAKAEWKAGHFGKVPGDEIEFIPLPEK"
     gene            complement(3667..5463)
                     /gene="aspS"
                     /locus_tag="VIY07_13065"
     CDS             complement(3667..5463)
                     /gene="aspS"
                     /locus_tag="VIY07_13065"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEY6382721.1"
                     /translation="MHRYRSHTCGALRESDIGKTVRLSGWCHRIRDHGGVLFIDLRDH
                     YGLTQVVADPDSKAFKLAETLRSEWVVRVDGKVRPRPAGTVNPDLPTGQVEVYIDEIE
                     VLGPAAELPMPVFGEQEYPEEIRLTYRFLDLRREHLHANIMLRGRIIDSIRRRMKEAG
                     FFEFQTPILTASSPEGARDYLVPARLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAP
                     CFRDEDARADRSPGEFYQLDLEMSFVTQQDVFDAVEPIMRGLFEEFSNGKPVTAKFPL
                     IPYAEALRKYGTDKPDLRNPIVMQDVSDAFRGSGFKVFANILDKDPSAQVWAVPAPKG
                     GNRAFSDRMNSWAQGEGQPGLGYIFWREGEESGAGPLAKNIGAERTKQIADQLKLGVG
                     DAVFFLAGKPKDFVKFAGLARAKIGEELGLINKDRFEFCWIVDFPMYEWNEEEKRIDF
                     SHNPFSMPNMPVEEFLALDPKDSDRLLSIKAIQYDIVCNGVELSSGAIRNHRPEVMKK
                     AFAIAGYGEDVLEKKFGGMLHALSLGAPPHGGIAPGIDRIVMLLAGEENLREVVLFPM
                     NQRAEDLMMGAPSEVSSKQLKELNIRLDLPKK"
     gene            5651..7270
                     /locus_tag="VIY07_13070"
     CDS             5651..7270
                     /locus_tag="VIY07_13070"
                     /inference="COORDINATES: protein motif:HMM:NF006122.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY6382722.1"
                     /translation="MTTAEAVVATLIGHGLDAVYALPGIHNDHLFDAFQRAGESLRVV
                     HTRHEQGAAYMALGAALATGKPQAYSVVPGPGLLNSGAALLTAYGMNAPVLAMIGQIP
                     AAAIGRDEGHLHEIRDQAGIIARLVDHSSHIDGPLDASLKIAKAVQSMRRGRHGPAAI
                     ECAIDVWGQRGRVSAIVPPSPPRPAKIDDDKVRAAAKVLGKSRRVLIVAGGGAQDASP
                     EVTLLSRMLQAPVLGYRRGRGVLDSRDPLSVTLPLGRELWAEADAVLAVGTRLFNPLR
                     QWGVDKDLQIVRVDSDPEEPARLYKPRVALIGDAAPVLRKLIDELLKFNTRREPRREE
                     MLERQGKLRERLAKLALQLAFLEAVRAELPEDGIYVDEVTQIGFAARLAFPVYKPRTF
                     LSPGYQDNLGWGYATALGAQHARPDVPVLSINGDGGFLYTGNELATAVRHRIPLVALI
                     FVDGAFGNVRRIQQEQFGNRLIASDLANPDFVKYAESFGAVGRRVRTPEELRPVLRES
                     FARREPVLIEIPVGALPSPWEFIHMPRARGK"
     gene            7319..8467
                     /gene="rnd"
                     /locus_tag="VIY07_13075"
     CDS             7319..8467
                     /gene="rnd"
                     /locus_tag="VIY07_13075"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HEY6382723.1"
                     /translation="MDLISTTDDLAEACSRMAAQPFVTVDTEFLRETTYYPLLCVAQM
                     ASPEEAIVIDALATGLDLTPFFALMANESVVKVFHAARQDIEIVWNMAKTIPHPIVDT
                     QVAAMVLGYGDSISYDQLVQRITGDALDKSHRFTDWTRRPLTDAQIAYAVSDVTHLRD
                     VYLKLATDLEKRGRSNWVEAEMEVLTSPDTYRGDPERAWERLKNRVRKPKELAVLMEI
                     AGWREREAQTRDVPRGRVIKDEVLVDIAVQAPTTIERLGQLRSLPKGFERSRWGEQIV
                     DACKRGLERDPKSLPRLERYKPTPNGAATVELLKVLLRMTAERYGVAAKIIATVEDLD
                     RIAANDEADVPALKGWRRELFGDKALALKQGRLSLAVDKGRVVTVEKD"
     gene            complement(8573..10036)
                     /gene="ppx"
                     /locus_tag="VIY07_13080"
     CDS             complement(8573..10036)
                     /gene="ppx"
                     /locus_tag="VIY07_13080"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003612441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HEY6382724.1"
                     /translation="MAVIDIGSNSIRLVVYEGLTRSPTPIFNEKVLAGLGRQVQSTGL
                     LPVDAIDTAFDALRRFRALCDILHVRRIWAIATAACRDARNGRAFIAEAERICRARIT
                     ILSGKREAHLTALGIVSGIHKPDGIVGDLGGGSLELVDVHGAHVRGGVTLPLGGLALQ
                     DITGKSLKKAEKFVEEAFENLDMLHDGEDRTFYAVGGTWRALARLHMWQTGYPFHVMH
                     NYRISAREAQEFSRLVHHVDTETLSKIEVVNTARRPLLSYAALVMENLVHTIKPKQVV
                     ISVLGVREGLLYSLLNKRERAKDPLISAAAELNVLRSRSPRHGEELIAWTDRFIGSSG
                     LDESADERRLRHAACLLADIGWRAHPDYRGEQSMNIIAHGSFVAIDHPGRAFLALSVY
                     FRHAGLSEEELSPRLRELATTRMLDRARVLGAAMRVAYLLTAGQAGVLPRTPMQVKRG
                     KLILKMPGSYRELASERLAGRLRQLARLIGREPIIEA"
     gene            complement(10092..12323)
                     /locus_tag="VIY07_13085"
     CDS             complement(10092..12323)
                     /locus_tag="VIY07_13085"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HEY6382725.1"
                     /translation="MADRGQGIAPIGEIDLPEKVVESGKAGPPSATANLRASPERFIN
                     RELSWLHFNRRVLEEAANENHPLLERVRFLSISANNLDEFFMVRVAGLKGQLREGILT
                     QSPDGLTPAEQLTRIGEAVSQLARDQQQRWMELRPALAAANVVLVDAADLKKAERSWL
                     EEHFLTHVFPLLTPLAIDPAHPFPFIPNLAFSIALQLARSKDGKAMNALIRMPQKIER
                     FIKLPSSGDHVIRLITLEETTALFISRLFPGYTAKGQGAFRAVRDSEVEIEEEAEDLV
                     RLFETALKQRRRGSVIRLELSATTPPELCSFVQRALAVADDEVFRVDGFLALNDLNQL
                     TKLDRPDLEFTPYNPRYPERIRDHGGDCFAAIRQKDLIVHHPYESFDVVVQFLQQAAR
                     DPNVVAIKQTLYRTSAESPIVKQLVEAAEAGKSVTALVELKARFDEEANIRWARDLER
                     AGAQVVYGFIELKTHAKLSLVVRREAGELATYVHVGTGNYHPVTARVYTDLSFFTADA
                     VIGRDVARIFNYITGYAEPAELERMAISPINLRKRVLEHIAQETAHAKAGKPAAIWMK
                     MNALVDPGIIDALYDASAAGVSIDLVVRGICCLRPGVPGLSENIRVKSIVGRFLEHGR
                     IYSFGAGHSLPHSKSAVYISSADMMPRNLDRRVEVLCPILNPTVHEQVLGQIMVANFK
                     DNEQSWKLLPDGSSTRIKAAPGEEPFNAHKYFMTNPSLSGRGKSLKESPPRSLIRRLI
                     EGA"
     gene            complement(12406..13089)
                     /locus_tag="VIY07_13090"
     CDS             complement(12406..13089)
                     /locus_tag="VIY07_13090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator DnaA"
                     /protein_id="HEY6382726.1"
                     /translation="MSGPFAPRQLLLALDHSVSFARDDFLSGPSNVAALSLVERWPDW
                     ADRIVALIGPEGSGKSHLAAIWAEATGARILSAKLLSTTSVPGALATGALVIEDLEAA
                     DLDEQALFHLINLAREERTYLLLTSRSAVASFPIRIRDLASRLRAVPTVTVAPPDDTL
                     LRSLLVKLAADRQLSFDESLLNYLVNRIERSFSAARATVQKLDREAMRQHRPVTRALA
                     AEVLRNMST"
     gene            complement(13095..14207)
                     /locus_tag="VIY07_13095"
     CDS             complement(13095..14207)
                     /locus_tag="VIY07_13095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEY6382727.1"
                     /translation="MSPRNPSRPRGSAAADPALVHRQLLFWLAGLLLFVLMLWLLSEI
                     MLPFVAGLAIAYLLTPVTDRLERLGVNRLAAALLIITIVVLALIYLILLVAPILAGQL
                     SSFFESVPGYITKLQSLLSDPSRPWLQKLLGAGFSADKSISDLMTQGVGWLTSFLHSL
                     WSGGRALVSLFSLVVVTPVVAFYLIYDWHRMVRAVDNWIPPQHRATVRELARQVDVAI
                     SGFVRGQTGVCLILGSFYSVALTLIGLNFGLLIGLISGLITFIPYVGSMTGLVVALGV
                     AIAQFWPSYGPILMVLAVFLVGQFIEGYVLAPKLVGESVGLHPVWIIFALLAFGYLFG
                     FVGLLVAVPLAATIGVLARFALRRYLRSSLYTGKPD"
     gene            complement(14204..14755)
                     /locus_tag="VIY07_13100"
     CDS             complement(14204..14755)
                     /locus_tag="VIY07_13100"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HEY6382728.1"
                     /translation="MSIPNLITLGRILLVPIVVWAISSGQQYMWIAFVLFLGAGVSDA
                     VDGYLAKRFHMTTELGAYLDPLADKALIVSIYITLGINGYIPGWLVILVVSRDIMIVG
                     AVILSWLVGIPIKVKPLLVSKLNTVAQIAYACVVLGTVGFGYSWPMVTLILMALVAVL
                     TLLSVAAYVAEWVRHINSTAVKS"
BASE COUNT         3171 a         4550 c         4563 g         2815 t
ORIGIN      
        1 cgatggcgcg gcagaaaccg actacgcccg taagcgtcgc ccaacgcctg ccgtcgcgtc
       61 ggcagctgca ggctgcagag ggtcgattgc ttcgacaagc tgaaggaacg agcttcccgg
      121 aagcggcggg gcgaacacgt aaccttgcgc ggagcgcacg ccaagcgacc gcagatgcat
      181 cacctgctcg aaattctcga cgccttcggc caccacatcc atgcgcatgt tgcgcgcaag
      241 atcgacgagg gtttcgacga tggtggtgga attgcggtcg gtgccgatag catccacgaa
      301 catcttgtcg atcttgatga tgtcgacccc gagcttgagc atgtaggaaa gcccgctgtg
      361 cccggtgccg acatcgtcga tcgcgattcg cacaccaagg ccctgcaagg cggcaatagt
      421 ctgccgcgtt tcggtaaagt tctcgatcgg gtcgcgctca gttacttcca gcaccacttg
      481 tgaaaacttg atcggcgagc ttgcgaagat gttgcggacg tccttcacga tcgtgggctc
      541 gctgaacagc ttgccggcaa aattgaacga gattctcaga tccgggcgcc ggccaattga
      601 ggcgcctgcc tcttcgcaaa ccttttgcat gaggttccgg gttagatcgc ggatgaaccc
      661 gctcgattcc atcagcggaa taaatgaacc cggcaagaca agcgtcccgt ccggcttgcg
      721 ccagcgaacc agaacctccg cgccgcgcag ctgaccggtg cggatatcga ccacgggctg
      781 ataataagga atgaattcgc cggcctcgag cgcatactcg atttcggtca tgggattggg
      841 cggcattctc cgcggcatca acaaaacgat gccggcggcg gccatcatga tgccgcctgc
      901 agcaaagaag cccagccatt taaggttctc atgctcggcc gcaatgcgcg tgcgcgacgt
      961 cacgatatgg acgtcaaatc cgaatttctc ggatttcgag tcggcgacaa aatttgagct
     1021 gtcatctccc ttcgcgcggt cgcccacctc ggcaataacg gtgccctgcc gcgtgacgat
     1081 tcgtgcgtag gcgctgaaag ggccgccctg cgtggaaacc tgcggcagga aaagcgtcgt
     1141 cggaataagc gcggcaacgc cattgggccc cgcgccagcc tggcggcgca gccgcaccat
     1201 gcgttctccg gcgggcagca caatgatgtc cagccagtac ccggcggcgc ccaccagcaa
     1261 ttccgacgag agcatcgtgc gttcgcccag tggaaggccg agatcggtgc ataacgtttc
     1321 ggcgtcggga ccaacgatcg cgatttcctt gaccggaatg gtgctgaaag cggcataccg
     1381 catcgcctcg acctgagccg gctcgcaggc attgaccccg cgcgcggcga ggccgtcgag
     1441 cgctccgacc gcatccttga cgcgtgcttc ggccagcgcg atggcgcgct ttgcggcagt
     1501 accgacctcc gcctcgccct tgcggtcgat cagcccttca agccagaaat tgagggcaaa
     1561 catgggcgcg ccggccacca ccgcccccac gaggatcgca aaaatatttc ggcgcgtgac
     1621 tgcgcgcacc aagaattcca tgcccggcct gtccaggaaa aaatgcggtc ctgctgccag
     1681 gatagtgagc catggcgccg taaagaccac cttaagtata agggcgtgac agccgtagtc
     1741 tggcgcgaaa tcgctcgagg cgtcactatg gttagggatc ggttaacgtc ggcccatgcc
     1801 ggaattcaca gaggatcgaa aatgaacatc cgctctgtct tattggctgc gtttgccctt
     1861 ctagccacga cgcctgtgaa tgccagcgca caggagcgta tcgaaatctt cgatgcccat
     1921 ctgcattaca accaggaacc gacaccattc tattcgcttg aacagatacg cgacgtattt
     1981 cggcgcaatg gaataaccgg aatcatcgcc aacagccgtc caaacaaagg gacgcttgag
     2041 ctcacggatg caaagtggcc cgagctgagg gtggtcccgt tcattcggcc gtatcgcgtg
     2101 cgcagcgaca tccagacctg gttcaacgat ccgtccatct tcgagctgat caaggatgaa
     2161 tatgcacgtg gcttttaccg cggcatcgga gaattccata tttacggtaa ggcggcggaa
     2221 tcggaatggg tgaaaaagat cgtggatttc gccgtcgagc gaaatctgta cctccacgcg
     2281 cattgcgacg aggaggcgtt gctcatcctg tttcgtcaca atcccaaggc gcggatcatc
     2341 tgggctcaca cgggattttc ggtgcccgcc gctcgggttg cgcaactgct cgaccagcat
     2401 aaggacgcgc tctggggcga actgtcgtat cgcggcggta tcacgggcgc cgacggcaag
     2461 ttgacaagcg actggcgcaa cttatttgaa cgttactccg accgtttcct gctcggttcg
     2521 gacacctgga tcaacgagcg ctggtttggt tacgacacga tcttcaagga atatcgtaac
     2581 tggcttgcgc agctttcgcc tgagcaggcg cgccgcatcg caagcggtaa tgcgctgcgt
     2641 ctgttcgacc aacgcgcgca gtaattaccg actgtaaggg agtcgcccca tgagtttctt
     2701 tcccggcaag gacccggagg ccggaaacag ctaccgatgc gatgcgataa gccaggtcat
     2761 cgtgccccgc acggtcgatc tcggcgactt tgccgtccgt cgcgcattgc cctccgcgcg
     2821 aacgcgcatg gtcggcccgt tcattttctt cgatcatttc ggcccggccg aattccgcgc
     2881 cggcaatggc ctcgacgttc gtccccaccc gcacatcggg cttgccaccg ttacctatct
     2941 gtttgacggc gaaatcatgc atcgcgacag cctgggcaca gccgttgcga tccggcccgg
     3001 cgaggtgaat tggatgaccg ccggccgcgg catcgtgcat tcggaacgca cccggccaga
     3061 acggcgggta gaccacgagc cgattcatgg attgcagatg tgggtggcat tacccgctgc
     3121 cagggaagaa atggaggcag cattcgcgca tcatgacacc gccgaatttc cgatcgtcaa
     3181 ggataatggc aagaacgtgc gcgtcgtcgt cggctccctt tatggcgtct cgtcgccggt
     3241 gccggttgtg cacgagacga tcttcgggga tgtgcgattg caggccggtt caagactacc
     3301 gctcgacgcc ggccacgagg aacgagcgat ctacgtgatc gacggcgtgg tcgatattgc
     3361 gggcgatcga ttcgaggcag gacgcctgct ggtgttcaag ccgggggact cggtcacgat
     3421 cgtcgccgtg aacgatgcgc attttgtcgt cctcggcggt gcgccgatgg acggaccacg
     3481 tcatatctgg tggaatttcg tgtcctcacg caaggaacgc atcgaacagg cgaaggccga
     3541 atggaaagcc ggccatttcg gcaaagtgcc gggcgatgaa atcgagttca tcccgctgcc
     3601 ggaaaagtaa ggaatgcatt gcccgtcatg cccggcctcg tgccggccat gacacgtgga
     3661 gaagggtcac ttcttgggca gatccagtct gatgttcagc tctttgagct gcttggacga
     3721 gacctccgat ggtgcgccca tcataaggtc ctcggcgcgc tggttcatcg ggaacagcac
     3781 cacttcgcgc aggttttctt cgccggcgag cagcatgacg atgcgatcga tgcccggcgc
     3841 tatgcctccg tgcggcggcg cgccgagcga tagcgcgtgc agcatgccgc cgaatttttt
     3901 ctccagcacg tcctcgccgt aaccggcaat ggcgaaggcc tttttcatca cttcaggacg
     3961 gtgattccgg atcgcgcctg acgagagctc cacgccattg cagacaatgt catattggat
     4021 cgccttgatc gacaggagcc tatcgctgtc cttcggatcc aacgcgagga attcctccac
     4081 cggcatattc ggcatcgaga acggattgtg ggagaaatcg atccttttct cctcctcgtt
     4141 ccactcgtac atcggaaagt cgacgatcca gcagaactcg aagcgatcct tgttgatgag
     4201 accgagctct tcaccgatct tcgcccgcgc aagtccagcg aacttgacga aatccttcgg
     4261 cttgcctgcg agaaagaaga ccgcgtcgcc aacgccgagc ttgagttggt cggcgatctg
     4321 ctttgtgcgt tccgcgccga tgttcttggc caatggaccg gcaccgcttt cctcgccctc
     4381 gcgccagaaa atgtagccaa gcccgggctg gccctcgcct tgcgcccacg aattcatgcg
     4441 gtcgctgaag gcgcgattgc cgcctttcgg ggcgggaact gcccatacct gggcggacgg
     4501 gtccttatcg aggatgttgg caaagacctt gaatcccgat ccgcgaaatg cgtcgctgac
     4561 gtcctgcatg acgatcggat tgcgcaagtc gggcttgtcg gtgccgtatt tgcgcaatgc
     4621 ctcggcatag gggataagcg gaaacttggc cgtcaccggc tttccgtttg agaactcctc
     4681 gaacaggccg cgcatgattg gctcgacggc gtcgaagacg tcctgttggg tgacgaagct
     4741 catctccaga tcgagttgat agaactcccc aggcgagcgg tcggcgcgcg cgtcctcgtc
     4801 gcgaaagcaa ggggcaatct ggaagtagcg atcgaagccg gcgaccatga tcagctgctt
     4861 gaattgctgt ggcgcctgag gcagcgcgta aaattttcca ggatgaagcc gcgccggcac
     4921 caggtagtcg cgcgcaccct ccggcgagga ggcggtgaga atcggagtct gaaattcgaa
     4981 aaagccggct tccttcatgc gccgtcgaat cgagtcgatg atcctgccgc gcaacatgat
     5041 gtttgcgtgc agatgctcgc gccgcagatc gaggaaacgg tatgtgagcc tgatctcttc
     5101 cggatattct tgttcgccga acaccggcat aggcagttcg gccgcggggc cgagcacctc
     5161 gatctcgtcg atgtagacct cgacctgccc ggtcggcaga tcgggattta cggtgccggc
     5221 cggccgcggg cgcaccttgc cgtcgacgcg cacgacccat tcggagcgga gggtctccgc
     5281 cagcttgaag gccttgctgt cgggatcggc cacgacttgc gtgaggccat agtgatcccg
     5341 caaatctatg aacagcaccc ccccgtgatc ccgaatgcgg tggcaccagc ccgaaaggcg
     5401 aaccgtcttg ccgatatcgc tctcgcgaag cgcgccgcag gtatgtgagc gataacgatg
     5461 catgggaatg tccgagagcg aggtggcaat ctgggtgcga ggccggcgaa aagcgcatgg
     5521 ggggtcggct ttgtcaaggc aaccaggctc gacatgttgc cctacggtct gcacactcgg
     5581 tcctagagta accaaacgcc gcatgcccaa atctcgagtt caaaagaaca ccaagtcgtc
     5641 cgcggcggat atgacgactg ccgaggcggt ggttgcgacc cttatcggcc atggactcga
     5701 tgccgtctac gcgttgcccg ggatccacaa cgatcatcta ttcgacgcct ttcagcgtgc
     5761 cggcgagtct ctgcgcgttg tccacacccg gcacgagcaa ggcgcggcct atatggcatt
     5821 gggtgcggca ctggcgacgg gcaaaccgca ggcctactcc gtggttccgg gccccggtct
     5881 actcaactca ggcgccgcct tgctcacggc ctacggaatg aatgcccctg tcctggcaat
     5941 gatcgggcaa attcccgcag cagctatcgg cagggacgag ggccatctac atgagatccg
     6001 cgatcaggca ggcataatcg cgcgcctggt ggatcattcg tcccatatcg atgggccgct
     6061 cgatgcatcg ctcaaaattg cgaaggcggt ccaatccatg cgccgcgggc gacatggacc
     6121 ggccgcaatc gaatgcgcga tcgatgtttg gggacagcgt ggacgggtgt ccgccatcgt
     6181 gccgccctcc ccgccgcgtc ctgcaaaaat cgacgacgac aaggtgcgcg cagcggctaa
     6241 agttcttggc aagtccagac gcgtgctcat tgtcgcaggc ggcggcgctc aggatgcctc
     6301 ccctgaggtg acgctcctgt cgaggatgtt gcaggcgccg gtgctcggct atcggcgagg
     6361 acgcggcgta ctcgacagcc gggacccttt gagcgtgacg cttccgctcg gccgagagct
     6421 gtgggcggaa gctgacgcgg tgctggctgt cggtacccgg ctgttcaatc cgctgagaca
     6481 atggggcgtg gacaaggatt tgcagatcgt gcgcgtcgat tccgatccgg aggaacccgc
     6541 gcgcctgtac aaaccgagag tggcgcttat cggcgacgcg gcaccggtcc tccgcaagtt
     6601 gatcgacgaa ctcctcaaat tcaatacgcg gcgagagccc cgccgcgagg aaatgcttga
     6661 gcgtcagggc aagcttcgcg aaaggctagc caagctcgcc ctgcagctgg cttttctcga
     6721 agcagtccgc gctgaactgc ccgaagacgg catttacgtc gatgaagtga cgcagatcgg
     6781 cttcgctgcc cggctcgctt ttccggtcta caagccacgc acattcctct cccccggcta
     6841 tcaggacaac ctcggctggg gctatgccac tgcgctcggc gcgcagcacg cgagaccgga
     6901 cgtgccggtc ctctcgatca atggcgatgg gggatttctt tacaccggca acgagctcgc
     6961 gacagcggtt cgtcaccgaa ttccgttggt ggccctgatt ttcgttgacg gggcgtttgg
     7021 caacgtgcgc cgtatccagc aggagcagtt cggcaaccgg ctgatcgcct ctgatcttgc
     7081 caatcccgat ttcgtcaaat acgccgaaag cttcggagcg gtcggtcgtc gggtgcgcac
     7141 gccggaggag ctccggccgg tattgcggga gtcattcgcc cgcagggagc ctgtgctgat
     7201 cgaaattcct gtcggggcgc tgccgagccc ttgggaattc attcacatgc cgcgcgcgcg
     7261 tggaaaataa atgcgagttg ccatgacgga gccggatcgg gttagctgtg cggccactat
     7321 ggatctgatc agcacgaccg acgacctcgc agaagcttgc tcgcgcatgg ctgcgcaacc
     7381 gttcgtcacc gtcgataccg aattcctccg cgaaaccact tactaccccc tgctttgcgt
     7441 cgcgcagatg gcctcgcccg aggaagccat tgtgattgat gctctcgcaa ccgggctcga
     7501 tctaaccccg ttttttgcgc tgatggcgaa tgaaagcgtc gtaaaggttt ttcacgccgc
     7561 gcgtcaggac attgaaatcg tctggaacat ggcaaagacc atcccgcatc cgatcgtcga
     7621 cacgcaggtg gctgccatgg tgctcggcta cggggattcg atatcctatg accagcttgt
     7681 gcaacgaatt accggcgatg cgctcgacaa gtcgcaccgg ttcacggact ggacccgccg
     7741 cccgctgacc gacgcgcaaa tcgcctacgc cgtgtccgac gtcacgcact tgcgcgatgt
     7801 ttacctgaag ctcgcgaccg acctggagaa gcgtggacgc agcaactggg tcgaggcgga
     7861 gatggaggtg ctgacttcgc ccgacaccta tcgcggcgac ccggaacgag catgggagcg
     7921 gctcaagaac cgcgtgcgca agccaaagga attggctgtg ctgatggaaa tcgccggctg
     7981 gcgcgagcgc gaggcgcaga cgcgcgatgt accgcgcggg cgcgtgatca aggacgaggt
     8041 gctcgtcgac attgcggtgc aggccccgac gacaatcgag cgcctgggac agctgcgatc
     8101 gctgccgaaa gggttcgagc gttcgcggtg gggcgagcag atcgtcgacg cctgcaagcg
     8161 gggcctcgaa cgcgatccca aaagcctgcc gcgcctcgag cgctacaaac cgacacccaa
     8221 cggcgcggca acggtcgagc tcctcaaagt cttgcttcgc atgaccgcgg aacgatacgg
     8281 cgttgccgcc aagatcattg cgaccgtcga ggacctcgac cgtatcgcag ccaacgacga
     8341 ggctgacgtt ccggcactga agggctggag acgcgagctg ttcggcgaca aggcgctcgc
     8401 gctcaaacaa ggtcggcttt cgctggcagt ggataaggga cgcgtcgtta cggttgaaaa
     8461 agattgacaa gtactccggt tattcccagc gcaagcggga atccagcgtt tcattcgcga
     8521 ataaaaatgc cgtgggtccc gctttcatgg ggacgaacga tcaacccgtg aactatgcct
     8581 cgataattgg ctcgcggccg atcagccgcg ccagctggcg cagccgaccg gccaatcgtt
     8641 cgctggcgag ttctctgtac gagccgggca tcttgaggat cagcttgccg cgcttgacct
     8701 gcatcggcgt cctgggaagc acaccggcct gccccgcggt gaggagataa gcgacccgca
     8761 tcgcggcgcc caaaacgcgc gcacggtcca gcatgcgcgt tgtggcaagc tcgcgcagcc
     8821 gtggcgacag ctcctcttcg ctcagcccag cgtggcgaaa ataaaccgac agcgcgagaa
     8881 atgcccttcc ggggtgatca atggccacga aagaaccgtg cgcgatgatg ttcatcgact
     8941 gctcgccgcg atagtccgga tgtgcgcgcc agccaatgtc ggccagcaag caagcggcgt
     9001 ggcgcaggcg gcgctcgtcg gcgctttcgt ccaggcccga tgacccgatg aaacggtctg
     9061 tccaggcaat caattcttcg ccatggcgtg gagagcggga gcgcagcacg ttgagttccg
     9121 ccgccgccga gatgagcgga tctttcgcgc gttcccgctt gttcagcagc gagtacaaca
     9181 ggccttcgcg cacgccgagg acggaaatga caacctgctt cggcttgatg gtatggacca
     9241 ggttctccat cacaagcgcg gcgtaggaga gcaacgggcg tcgcgcagta ttcacaactt
     9301 caattttcga caaggtctcg gtatcgacgt ggtgcacaag cctggaaaac tcttgcgcct
     9361 cgcgcgcgga aatacggtag ttgtgcatga cgtgaaacgg gtagccggtc tgccacatgt
     9421 gcagccgcgc cagcgcgcgc caggtcccgc ccactgcata gaacgtgcgg tcttcgccgt
     9481 cgtgcagcat gtcgaggttt tcgaaagcct cctcgacgaa tttctccgcc tttttgaggg
     9541 atttgccggt gatgtcctgg agcgcaagtc cgccaagcgg caacgtcact ccgccgcgca
     9601 cgtgcgcacc atgcacgtcg acaagttcga gagagccgcc gccaaggtcg ccgacaatgc
     9661 catcgggctt gtgaattcct gacacgatgc caagcgcggt gagatgggcc tcgcgcttcc
     9721 cggaaagaat cgtgattctc gcgcggcaaa tgcgttcggc ttcggcgatg aaagcgcggc
     9781 cattgcgcgc gtcccggcag gccgccgtgg caatcgccca gatgcgccgc acatgcagga
     9841 tatcgcacaa ggcgcggaaa cggcgcaggg catcgaaagc cgtatcgatg gcgtcgaccg
     9901 gcagcaagcc ggtcgactga acctgccgtc ccagcccggc caataccttc tcgttgaaga
     9961 tgggcgtcgg cgaacgcgtt agcccctcgt aaacaacgag ccggattgaa ttcgagccga
    10021 tatcgatcac agcgatcggc ggaccattgt ccaggcggcc tttcgccgag gcaacgagtg
    10081 ccgatgaacg cttacgcccc ctcgatgagg cggcgtataa ggctgcgcgg cggcgattcc
    10141 ttgagcgatt tcccacggcc cgacaggctc ggattggtca tgaaatattt gtgggcgttg
    10201 aagggttctt cgcccggggc cgcctttatg cgcgtggaac tgccatccgg caagagcttc
    10261 cagctttgtt cgttgtcctt gaaattggcc accataattt gaccaagaac ctgttcgtgc
    10321 actgtcggat tgagaatcgg acaaagcacc tcgacccggc ggtcgagatt gcgcggcatc
    10381 atgtcggcgg aggaaatata aaccgccgac ttggaatgcg gcagcgaatg gcccgcgccg
    10441 aagctgtaga tgcggccgtg ttcgaggaac cggccaacga tcgatttcac gcgaatgttc
    10501 tcggacagcc cgggcactcc cggccgcagg cagcagatgc cgcgaacgac aagatcgatg
    10561 gaaacccccg cagccgatgc atcgtaaagg gcgtcgatga tccccggatc gacgagcgcg
    10621 ttcattttca tccagatcgc tgcaggcttg ccagccttcg catgcgcagt ctcctgcgcg
    10681 atgtgttcaa gaacgcgctt gcgcagattg atcggtgaaa tggccatgcg ctcaagctcg
    10741 gccggctccg cataaccggt gatgtagttg aagatgcgcg ccacatcgcg gccaatcact
    10801 gcatcggcgg tgaagaacga cagatcggta taaacgcgcg cagtaaccgg atgatagttg
    10861 ccggtcccca catgcacgta agtcgccagt tcccccgcct cacgtcgcac taccagcgac
    10921 agctttgcgt gtgtttttag ttcgatgaac ccgtacacga cctgcgcgcc cgcgcgttcc
    10981 aggtcgcgcg cccagcggat gttggcctcc tcgtcaaagc gcgccttgag ctcgacgagg
    11041 gcggtgacgg atttgcctgc ttcagccgcc tccacgagct gtttcacgat cggcgattca
    11101 gccgatgtgc ggtaaagcgt ctgcttgatc gcaacgacat tgggatctcg cgcagcttgt
    11161 tgcaggaatt gcaccacgac atcgaatgac tcgtaaggat ggtggacaat aagatctttc
    11221 tgacgaattg ctgcgaagca atcgccaccg tggtcgcgta tgcgttcggg ataacgagga
    11281 ttgtacggtg taaactcgag gtcgggtcga tcaagtttcg taagctgatt gaggtcgttg
    11341 agcgccagaa aaccatcgac ccggaagacc tcatcgtcgg cgaccgccag cgcgcgctgc
    11401 acgaaactgc acaactctgg cggcgttgtc gcgctgagct caagccggat caccgatccg
    11461 cgccggcgct gtttcagcgc cgtttcgaac aaccgcacga ggtcctcggc ctcttcttcg
    11521 atttctactt cggagtcgcg gaccgcccgg aatgctccct gtccttttgc cgtatagccg
    11581 ggaaagagtc ggctgatgaa cagcgcagtc gtttcttcca gcgtgatcaa tcgaataaca
    11641 tgatccccgc tgctagggag cttgatgaac cgttctatct tctgcggcat gcggatgagc
    11701 gcattcatcg ccttgccatc tttgctgcgg gcgagttgca gggcgatgga gaaagccaga
    11761 ttgggtatga acgggaatgg atgtgccgga tcgatcgcga gcggcgtcag cagtggaaag
    11821 acgtgggtga gaaagtgttc ttcgagccag ctgcgctcgg ccttcttgag atcggctgcg
    11881 tccacaagca cgacgtttgc ggcagccagt gctggacgca gctccatcca gcgttgctgc
    11941 tgatcgcgag cgagttggga gaccgcctcg ccgatgcggg tcagctgctc ggccggagta
    12001 agaccatcag gactttgagt cagaatgccc tctcgcaact gacccttcag cccggccacg
    12061 cgaaccatga aaaattcatc aaggttgttg gcggaaatcg aaaggaagcg cacgcgttcg
    12121 agcagcggat ggttctcatt tgccgcctct tccagaacgc gtcgattgaa gtgcagccag
    12181 gacagttcgc gattgatgaa ccgctcgggg ctcgctctca gattggcggt cgctgacggg
    12241 ggccccgcct tgccagattc gaccaccttc tcagggaggt cgatttcccc aatgggtgca
    12301 atgccttgac cgcgatccgc catttggaag actgcctgcc gatttgaatg ccgtagcgga
    12361 taataatggc cgctggatga cagttcgccc ccgcaagggg atccgtcaag tggacatgtt
    12421 gcgcaaaact tcggcagcca aagcacgcgt caccggccgg tgttgccgca tcgcttcgcg
    12481 gtcgagtttt tgcacggtcg cgcgcgcagc cgaaaaggag cgttcaatac gattgacgag
    12541 gtaattcaac agcgattcgt cgaaggacag ctgacggtct gccgcaagct tcacgagaag
    12601 agagcgcaac agcgtgtcat caggcggcgc caccgtgacc gtcggaacgg cgcgtaatcg
    12661 cgaagccagg tcacgaatcc tgattgggaa gctcgccacc gccgaacgag acgtgaggag
    12721 cagatacgtt cgctcttcgc gcgcaagatt gatcaagtga aaaagcgcct gctcatcaag
    12781 atcggcagct tccaggtctt cgataaccag tgcaccagtc gcaagcgctc ccggcacgct
    12841 cgtcgtggag agcagcttcg ctgataatat gcgcgcaccg gtcgcctccg cccagatagc
    12901 ggcaagatga cttttgccag acccctcagg accgatgagc gcaacaatcc ggtccgccca
    12961 atccggccag cgctcgacca gggagagtgc tgcaacgttc gatggaccgc tcagaaaatc
    13021 atcgcgagcg aaactgaccg agtgatcgag ggccaataag agctgacgcg gggcgaacgg
    13081 gccgctcata gcggtcaatc cggtttgccg gtgtagagcg aacttcgcag gtaccgacgc
    13141 agcgcgaacc gcgccagcac cccgatcgtg gcagccagcg gcacggcaac cagaagaccg
    13201 acgaagccaa acagatagcc gaaagcgagc agcgcgaaaa tgatccacac cgggtggagc
    13261 ccgacgctct cgccaaccag ctttggcgcg agcacatacc cttcgataaa ttggccgacc
    13321 aggaaaaccg cgaggaccat gaggatcggc ccgtaactgg gccaaaactg cgcgatcgcc
    13381 acgccaagcg caaccaccaa cccggtcatg gatccgacgt agggtatgaa agtgatcaag
    13441 ccggaaatca aaccaatcag cagcccgaaa ttgagaccga tcagcgtcag cgccaccgag
    13501 tagaatgagc ccaggatcag acagactccg gtctgaccgc ggacaaagcc ggaaatcgcc
    13561 acgtcaacct gccgggccaa ttcgcgaacc gttgcgcggt gctgcggcgg gatccaattg
    13621 tcgaccgcgc gaaccatgcg gtgccagtca tagataagat aaaaagcaac cacaggcgtg
    13681 accacaacga gcgagaacaa ggacaccagc gcgcgtccgc ccgaccatag cgaatgcagg
    13741 aacgaggtca gccagcccac accctgcgtc atcagatcgc tgatggactt gtcggcgctg
    13801 aagcctgccc ccaacagctt ttgaagccag ggtcggcttg ggtcgcttaa caggctctgc
    13861 aatttcgtga tgtagccggg aacactctcg aagaatgacg ataactgtcc ggcaagaatg
    13921 ggtgccacca gcagaatgag ataaatcaaa gccagcacca cgatcgtgat gatcagcagc
    13981 gctgccgcga gacggttgac gcccagacgc tcaagacgat ccgtgacagg ggtgagcaaa
    14041 taagcaatcg cgaggccggc cacaaaaggc agcatgattt cgctgagcag ccacagcatc
    14101 aggacgaata acagcaatcc tgcgagccaa aacagcaatt gccggtggac gagcgcggga
    14161 tctgcggcag cgctgccacg cggacgcgaa ggatttcgcg ggctcacgac ttgacggccg
    14221 tcgagttgat atgccgcacc cattcggcca cataggcggc aaccgacagg agtgtcaaaa
    14281 ccgcgacaag cgccatgagg atcagcgtca ccatcggcca cgagtagcca aagccgaccg
    14341 tgcccagcac cacacaggca tacgcaatct gcgccacggt gttgagcttg gagacaagca
    14401 gcggcttcac cttgatcggt atccctacca gccaggacag aatcacggcg cccacaatca
    14461 taatgtcgcg cgagacgacg agaatcacca gccagcccgg gatataaccg ttaatgccga
    14521 gcgtgatgta gatggatacg atcagcgcct tgtcggcaag ggggtcgaga taggcgccga
    14581 gctcggttgt catgtgaaat cgtttggcca aatagccgtc gacggcatca ctcacgccag
    14641 ccccgaggaa aaggacgaag gcgatccaca tgtattgctg tcccgagctg atcgcccaga
    14701 caacgatcgg cactagcaaa atgcggccca gcgttatgag atttggaata ctcaaggcaa
    14761 tcccggcttg cggcccgccc cggctgacgt tgccgaaaac gcgccaattc catcaataga
    14821 gtatgacggg cggcagcgtg gcgttcaatg tcgcctagta tcagcctgtt agtatttggg
    14881 gggatttctc taacgtcgca agtgcgtcga atatccctct gtgacaggga gtgctgacga
    14941 gtttggggac caaaattggg tccaaaaaaa ccggcacgaa ggccggacaa attagacctg
    15001 cttgcgcatt acatccagca gtaactcgtc ctcctccctg cggcgatcct tgcgccacgc
    15061 caaccattcg agaggctcct taggctcgcg tccgtgctg
//
LOCUS       DATDHO010000679         5371 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_428896, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000679 DATDHO010000000
VERSION     DATDHO010000679.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5371
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_428896"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..257)
                     /locus_tag="VIY07_13105"
     CDS             complement(<1..257)
                     /locus_tag="VIY07_13105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382729.1"
                     /translation="MTIALPASSSARRTFGFDLSKPVLVAFAVILFALIAMPLSWLLF
                     YAFSSKGGGFTLDNFHRLVSDAAYLDPLLTTFALATLSALI"
     gene            complement(412..1479)
                     /locus_tag="VIY07_13110"
     CDS             complement(412..1479)
                     /locus_tag="VIY07_13110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY6382730.1"
                     /translation="MKGSKISRRDVLIGSSALAAGAAFSTRVMSAAPPASAVTPALIE
                     AAKKEGKVVWYTSVDLKLSEQIGKAFEAKYPGVSCKVERTGAERILQRIGQEYTANVH
                     AVDVVNSSDAAHLVYWKDQGLLAPYVPEDVAKFYPVEHKDADGTYASFRVFLCVIAYN
                     TNMVKKEEAPKSFADLLDPKWKGKIVKAHPGYSGTIMTATYQMSRDLGWEYFEKLAQQ
                     NILQVQSAADPPKKIALGERAIQADGVEYLIHQGREAGQPVEPVYATEGTPLIIGPNG
                     LFKAAPNPNAARLFQSFCFSPECQQLCIDIGGLRSVHPQIKEHTGRTPLGKIKTMKDD
                     AAGVLKNSEQIKARYTKIFRV"
     gene            complement(1523..2581)
                     /locus_tag="VIY07_13115"
     CDS             complement(1523..2581)
                     /locus_tag="VIY07_13115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382731.1"
                     /translation="MASVELRDLTKRYGEVAVVDDISLTIEHGHLVCLLGPSGCGKTT
                     TLRLIAGFVEPSEGEIRVGDKLVSSPAHSVPPEKRNMSMIFQSYALWPHMTVAENIVY
                     GLKLRKLDRDTIGKKLDAILATTRLAPLAQRYPGELSGGQQQRVALARALIVEPETLL
                     LDEPLSNLDANLREEMRFEVRRLHDAYRYTTVYVTHDQSEAMTTADLIAVMNAGKIEQ
                     AGSPEEIYDRPRSEFVARFIGSSNVIKGKGLDGARIDFAGTPLRCTGAKINAGASTPV
                     SIRPHDIVISATQRQGENVVPATVVRQVFLGGTRDYMVEAKDGTPLRVITAAGENIPQ
                     GSAVWLQLPPERCRALSG"
     gene            complement(2678..3466)
                     /locus_tag="VIY07_13120"
     CDS             complement(2678..3466)
                     /locus_tag="VIY07_13120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HEY6382732.1"
                     /translation="MSTDKMLSRKEGKVGYLTFNNPERHNAVSLEMWEAAEGFLEEFK
                     NDKNIRVVVVTGAGGKAFISGADISKFEKERSTQEAVDRYNAAVDRANNAFYTFPKPI
                     IAMIRGYCIGGGVGLALCCDIRICTEESKFGVPAAKLGLGYRFDGLKKLVDLVGPSFA
                     KEIFFTARQFTAAEAQMMGLVNRVLPDRELEGYVKEYADTIAANAPLTVDSVKYIVGQ
                     TLTDESKRDLKKCDELVQACFASNDYKEGRKAFMEKRKPAFTGS"
     gene            complement(3577..4770)
                     /locus_tag="VIY07_13125"
     CDS             complement(3577..4770)
                     /locus_tag="VIY07_13125"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY6382733.1"
                     /translation="MPFPRASQALSRVTVLDLTRVRSGPTCVRQLADWGANVIKIETP
                     PHLEKGEGPGGPRNGPDFQNLHRNKRSITLDLKSPKGLAAFKRMVEKADVVVENFRPD
                     VKDRLGIDYESLRKINKRIILASISGFGQDGPYRDRPGFDQIAQGMGGLMSITGLPGQ
                     GPVRVGIPIADLSAGLFCALGIMVALLERETSGEGQWVNTSLLQAQIFMLDFQAARWL
                     QAGEVPKQAGNNHPTSIPTGVFKTRDGHINIASTGQVMWERLCNAIEAPELIKHPDYS
                     TGALRSKNRDALNAEIDKRTVNKSSAEWIEIFNTIGVPCGPIYSIDQMFGDEQVKHIG
                     IAQGARRPDGSEQIFVGQPVSLSRTPSTIVATPPEQGQHTDEVLKEFGFADNEIAELH
                     KVQAV"
     gene            5253..>5371
                     /locus_tag="VIY07_13130"
     CDS             5253..>5371
                     /locus_tag="VIY07_13130"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEY6382734.1"
                     /translation="MTSFNEFGLAGPIIRALAEEKYVTPTPIQTQTIPTAAQGR"
BASE COUNT         1016 a         1650 c         1563 g         1142 t
ORIGIN      
        1 catatgagcg cggacaatgt tgcgagggcg aaggtggtca gcagcgggtc gagatatgcc
       61 gcgtcgctca ccagccgatg gaagttgtcg agcgtgaacc cgccgccctt gctgctgaag
      121 gcgtagaaca gcagccacga caacggcatc gcgataagcg caaacagtat taccgcaaat
      181 gccaccagca ccggtttcga cagatcgaag ccgaacgttc ggcgtgcgga agacgatgca
      241 ggcagagcga tggtcatggt tggttacttc tatgcaaact cagattgtca tgcccggccc
      301 tgtgacgggc attcacgtct tgaaagctct cagacgcaca aagacgtgga tggccgggcc
      361 aagcccggcc atgactacgc tgaacgtcac acaatcgaga ctgccatttc attacacgcg
      421 gaagatcttg gtatagcgcg ccttgatctg ctcgctattc ttgagcacgc cggccgcgtc
      481 gtccttcatc gtcttgatct tgccgagggg cgtgcggccg gtgtgttcct tgatttgcgg
      541 atgcacggag cgcagcccgc caatgtcgat gcagagctgc tggcattccg gcgagaagca
      601 gaagctctgg aacaggcggg cggcattcgg gttcggcgcg gccttgaaca ggccgttggg
      661 tccgatgatc agcggcgtgc cctcggtcgc gtagacgggc tcgacaggtt gcccggcctc
      721 tctcccctgg tgaataagat attcgacgcc gtcggcctgg atcgcccgtt cgccaagagc
      781 aatctttttt ggcgggtcgg cggctgactg cacctgcagg atattctgtt gcgccaattt
      841 ctcgaaatat tcccagccga gatcgcgcga catctggtac gtcgccgtca tgatggtgcc
      901 gctgtagccg ggatgcgcct tgacgatctt gcccttccat ttcggatcga gcagatcggc
      961 gaaactcttc ggcgcctctt ctttcttcac catgttggtg ttgtaggcaa taacgcacag
     1021 aaacacgcgg aagctggcat aggtgccgtc agcatccttg tgctcgaccg gatagaactt
     1081 cgccacgtct tcgggaacgt agggcgcaag gaggccctgg tccttccagt acacgagatg
     1141 cgccgcgtcg gaggagttca cgacgtcgac cgcgtgcaca ttggcggtat attcctggcc
     1201 gattcgttgc aagatgcgtt cggcgccggt gcgctcaacc ttgcagctga cccccgggta
     1261 cttcgcttcg aacgccttgc cgatctgctc ggacaatttg aggtcgacgg aggtgtacca
     1321 gacaaccttg ccttccttct tggccgcctc gataagcgcg ggcgtgaccg cgctcgccgg
     1381 cggcgcagct gacatcaccc tggtcgagaa cgctgcgccc gcggccagcg cgctcgagcc
     1441 gatgagcaca tcgcggcgtg agattttcga tcctttcatc ggcgtatcct ccaactgatt
     1501 gttttttcgc cccgcgacgt ccttatccgc tcagcgcgcg gcagcgctcg ggcggcaact
     1561 gcagccagac cgcgctacct tgcgggatat tttcaccggc ggcagtgatc acgcgcagcg
     1621 gcgtgccgtc cttggcctca accatatagt cccgcgtgcc accgagaaag acctgccgca
     1681 cgacagttgc cgggacgacg ttttcgcctt gccgttgcgt ggccgaaatc acgatgtcgt
     1741 gcggacggat cgacaccggc gtcgatgcgc cggcgttgat tttcgcgccc gtgcaacgca
     1801 gcggagtgcc ggcaaaatcg atgcgggcac catcgagacc cttgccttta atgacattgc
     1861 tggaaccgat aaagcgcgcg acgaactccg agcgaggccg atcatagatt tcctccggcg
     1921 aaccggcctg ctcgatcttt cccgcgttca tcaccgcgat caggtcggcc gttgtcatgg
     1981 cttccgactg atcgtgggtg acgtagaccg tcgtgtaacg ataggcatca tgcaggcggc
     2041 gcacctcgaa gcgcatctcc tcgcgcaaat ttgcgtcgag attggagagc ggttcgtcga
     2101 gcaggagggt ttccggctcc acgatgaggg cgcgcgcaag cgccacgcgc tgctgctgcc
     2161 cgcccgacag ctctcccgga tagcgctgcg caagcggcgc gaggcgggtg gtcgcgagaa
     2221 tggcatcgag tttcttgccg atggtgtcgc ggtccaattt tcgcagcttc aggccgtaaa
     2281 cgatgttctc ggccactgtc atatgcggcc acaacgcata gctctggaag atcatcgaca
     2341 tgttgcgctt ttcggggggc accgaatgcg cgggtgagga cacgagcttg tcgccgacgc
     2401 ggatttcgcc ttcgctcggc tcgacgaagc cggcgatgag ccgcagcgtt gtcgtctttc
     2461 cgcagcccga cggaccgagc agacagacaa gatgaccatg ctcgatggtc agcgatatgt
     2521 cgtcgaccac ggcgacctcg ccgtatcgct tggtcagatc ccgcaactcg acggacgcca
     2581 cgcgcttcct cccctaaacc gccgcttcgc acggctgtat catttgcatt ccatctacga
     2641 acaccgcagc agctttcctc ttcactcccg ccgcaatcta cgagccggtg aatgccggct
     2701 tgcgcttctc catgaatgcc ttgcggccct ctttgtagtc attgctggca aaacaggctt
     2761 gcacgagctc gtcgcacttc ttcaggtcgc gcttgctttc gtcggtgagc gtttgaccga
     2821 caatgtattt gaccgaatcg acggtgagcg gcgcatttgc tgcaatcgtg tcggcgtatt
     2881 ccttgacgta gccctccagt tcccgatcgg gcagtacgcg attgacgaga cccatcatct
     2941 gcgcctcggc agccgtgaac tggcgcgcag tgaagaagat ttccttggca aaggacggcc
     3001 ccaccaggtc gacgagcttc ttcagtccgt caaaccggta gccaaggccg agcttggcgg
     3061 caggcacgcc gaatttggac tcttcggtgc aaatgcggat atcgcagcac agggcgagcc
     3121 ccacgccgcc gccgatgcag tagccacgga tcatggcgat gatcggcttg ggaaaggtat
     3181 aaaatgcgtt gttcgctcga tcgaccgcgg cgttgtaccg gtcgacggct tcctgcgtcg
     3241 aacgctcctt ctcgaatttg gaaatgtcgg ctcccgaaat gaaggccttg cccccggccc
     3301 cggtcaccac aacgacgcgg atgtttttgt cgttcttgaa ttcctcgaga aatccttcag
     3361 cggcttccca catttccagt gaaactgcat tgtgacgctc aggattgttg aaggtcaaat
     3421 agccgacctt gccttccttg cgagacaaca tcttgtccgt cgacatccac gtgctccttc
     3481 gactcacttt gtcatgcccg gccttatgcc cggcatccac gtctttcctc gtttcaagac
     3541 gtgagtggcc ggggcaagcc cggccatgtc gattcatcac accgcttgca ccttgtgcag
     3601 ctccgcaatt tcattgtcgg caaaaccgaa ctccttcagc acctcgtcgg tgtgttggcc
     3661 ctgctccggc ggtgtcgcca cgatcgtgct cggggtgcgg gacagactca ccggctgtcc
     3721 gacgaaaatc tgttcgctgc cgtccggccg cctggcgcct tgcgcaatgc cgatgtgttt
     3781 gacctgttcg tcaccgaaca tctgatcgat cgagtagatc ggaccgcacg gcactccgat
     3841 cgtgttgaat atctcgatcc attccgcact gctcttgttg accgtgcgct tgtcgatttc
     3901 cgcattcagc gcatcgcggt ttttggaacg caaggcgcca gtggaataat cgggatgctt
     3961 gatcagctcg ggcgcttcga ttgcattgca gagccgctcc cacatcactt gcccggtcga
     4021 ggcaatgttg atgtgtccgt ccctggtctt gaacacgccg gtcggaatac tggtggggtg
     4081 attgttgccg gcctgcttcg gcacttcgcc cgcctgcagc cagcgcgcgg cctgaaagtc
     4141 gagcatgaaa atctgcgcct gcagaagcga cgtgtttacc cattgacctt cgccggacgt
     4201 ttcccgctcc agcagcgcaa ccatgatacc caatgcacag aacaggccgg cggaaagatc
     4261 ggcgatcgga atgccgacgc ggacggggcc ctgccccggc aagccggtga tcgacatcag
     4321 gccacccatg ccctgcgcga tctggtcgaa gccgggccgg tcgcgatagg ggccgtcctg
     4381 gccgaagccg gagatgctgg cgaggatgat gcgtttgttg atcttgcgca gcgactcgta
     4441 atcgatgccc agccggtcct tcacatcggg acggaagttc tccaccacca catcggcctt
     4501 ctcgaccatg cgcttgaaag ccgcgaggcc ttttggcgat ttcagatcga gggtaatgct
     4561 gcgcttgttg cggtgcaggt tctgaaagtc aggtccgttg cgcggaccgc cgggcccctc
     4621 gcctttttcc agatgcggcg gcgtttcgat cttgatgacg tttgcgcccc aatccgcgag
     4681 ctggcgcacg caggttgggc cagaacggac acgagtgagg tcgagaacgg taacgcgaga
     4741 aagagcctgg gaggctctgg ggaacggcat tcaacggctc cacaatagct atcacgcttg
     4801 aaaagctgaa ttttgggccc gaccttcccc gatctctcgg ggcttgtcta ttcttccgtc
     4861 attccggggc gcgagcgata aggcggatcc gagttcagaa acatgcactg gcatcggatt
     4921 cccggtccct gcggccatcc ggaactgacg tcaaaaaccg tccaaaaccc gccggtatgc
     4981 gttttattca tcattattca ttatttggca gagcaacgag cagcccgcac cttgaaaagg
     5041 acaccgtggg ctgtcatatg accggtgcgg atgaaagacc cggtctcggg tttgcgggct
     5101 gcgtgcacga agctcattaa aacgaatttc gccccgccca tccgaattct gaacctgacg
     5161 acaaccctgg caatgcggga tgtctttgaa ccctgcgatt ccgccgctcg catcagcgac
     5221 gcggccgtct cgccatataa gaaagagact ctttgacttc atttaacgag ttcggcctcg
     5281 cagggccgat catccgcgcc ctcgcggaag aaaaatacgt aactcccacc ccgattcaga
     5341 cccagaccat tccgactgcc gcacaaggcc g
//
LOCUS       DATDHO010000680         2721 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_230110, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000680 DATDHO010000000
VERSION     DATDHO010000680.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230110"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(18..1103)
                     /locus_tag="VIY07_13135"
     CDS             complement(18..1103)
                     /locus_tag="VIY07_13135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HEY6382735.1"
                     /translation="MTANTAFHIAVLPGDGIGTEVMAPALEILRRIEASTPSLQFRFT
                     EGAAGAGYYKETGKSMPDSTVKLCEEADAILLGACGLPSVRYPDNTEIMPQVELRFIF
                     DLYAGVRPARLIPGVPSPIVNAHERGIDFVLIRESTEGLFASMGKGVVTTDEARETLV
                     ITRKTSQRLFDFSLRLAERRKKRGKPGLLTCVDKANAFKAYAYFRSIFDERAKNFPGV
                     RTDHVYVDACAALMVRRPWDFDVMVMENIFGDILSDLAAGLIGGLGIAPSADIGDKHA
                     VFQPCHGTAPDIMGQGKANPTAMILSAAMMLDWLADKHDHQSAAEAAQRIEAAVDKAY
                     GGGIKPMEYGGTDGTAAITKAVLAALG"
     gene            1190..1975
                     /locus_tag="VIY07_13140"
     CDS             1190..1975
                     /locus_tag="VIY07_13140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006338743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HEY6382736.1"
                     /translation="MPRFAANLGYLFTDRPLLERIDAAAAAGFKAIELQFPYDVPAAA
                     VKAAIQKNKLTILGLNTPPGREGEFGLAAVPAREKDWQALFNRAFDYASEIGASAIHC
                     LAGKVAPEQRPAADRVFIENLAIAADRAAARNIGLLIEPINGRDRPNYFLNHVEHAAN
                     VIAKAGKPNIRMQFDFYHVQIVGGDLIHRLEKFLPVIGHLQCAAVPSRHEPDEGEVNY
                     RAVFEAVDKLGYRGWIGAEYRPRGRTEDGLGWARQYGVALPHR"
     gene            2052..2624
                     /locus_tag="VIY07_13145"
     CDS             2052..2624
                     /locus_tag="VIY07_13145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382737.1"
                     /translation="MWEPKENDPETQTTASGNPLKDAVREARIEAAERSGVVVDLRDA
                     DVARLELLNDALDPLFKEIPDDIELFDRGVSKGDVPRLWIDVVAHVEMGRDKRQYRFI
                     QDTRYGRAILAESYEVPAIVQAIARYVAGRMIERERTLSGDATGGVAQSVLRRMRNKR
                     RWRAVRTFIYGLVAGVAVLFALAMLTNSQS"
BASE COUNT          524 a          803 c          847 g          547 t
ORIGIN      
        1 acgaacggga aaatttttca gccgagcgct gcgagcacgg cctttgtgat ggcggcagtt
       61 ccgtctgtgc cgccgtactc catcggtttg atgcccccgc cataggcctt gtccaccgcg
      121 gcttcaatgc gctgcgctgc ctcagccgca gactggtgat cgtgcttgtc ggcaagccaa
      181 tcgagcatca tcgcggcgga caggatcatc gcagtcggat tggccttgcc ttgccccata
      241 atgtcgggcg cggtgccatg gcacggctgg aagaccgcgt gcttgtctcc aatatccgcc
      301 gagggtgcaa tgccgaggcc gccgatgagt ccggctgcga gatctgaaag gatgtcaccg
      361 aagatgtttt ccatcaccat gacgtcgaaa tcccaaggtc tgcgcaccat cagcgcggca
      421 caggcatcga catagacgtg atcggtcctg acgcctggaa agttctttgc gcgctcgtcg
      481 aaaatcgagc ggaaataggc gtaggccttg aatgcattgg ctttgtcgac gcaggtcaga
      541 aggccgggct tgccgcgttt ctttcgcctt tcggcgaggc gcagcgagaa atcgaacagg
      601 cgctgcgacg tctttcgggt gatcaccagc gtctcacgcg cctcatccgt ggtgacgacg
      661 cctttcccca tcgatgcgaa caggccttcg gtcgattcac ggatcagcac aaagtcgatg
      721 ccgcgctcgt gcgcgtttac gatcggactt gggacaccag gtatgagccg cgcgggccgc
      781 acgccggcat agagatcgaa gatgaagcgc agctcgacct gcggcatgat ctcagtgttg
      841 tcgggatagc gcacgctcgg cagtccgcat gccccgagca gaatggcgtc agcttcctcg
      901 cacagtttga cggtcgaatc cggcatcgac ttgccggttt ccttgtagta cccggcgcct
      961 gccgcgcctt cggtgaagcg gaattgcagg cttggggtgc tcgcttcgat gcgccgcaga
     1021 atctccagcg cgggagccat cacctcggtg ccgattccat cacccggcag tacggcaata
     1081 tggaaagctg tattggcggt catcgatttt tccggatggc attgtgcagg ttgcggcgct
     1141 aatgaatacg cccgcgcgtc cgcgcgcaag ggatcattga ggggagtcca tgccgcgctt
     1201 tgccgccaat ctcggctatt tgttcaccga ccgaccattg ctcgaaagga ttgatgccgc
     1261 cgcggccgcc ggcttcaagg ccatcgagct gcaatttcct tacgacgtgc ctgcggccgc
     1321 ggtaaaggca gcgatacaaa aaaacaagct caccattctg ggcctgaata caccgcccgg
     1381 tcgcgaaggc gaattcggac tagcggccgt gccggcgcgc gagaaggatt ggcaggcgct
     1441 gttcaaccgc gcgttcgatt atgcgagcga gattggcgcc agcgcgattc attgccttgc
     1501 gggcaaggtc gcgccagagc agcgcccggc ggccgaccgg gtatttattg aaaaccttgc
     1561 catcgccgcc gaccgtgcag cggcgaggaa catcggtttg ctcatcgagc cgataaacgg
     1621 tcgcgaccgg ccaaattatt ttctcaatca tgtggagcac gcggcaaacg ttatcgcaaa
     1681 ggccggcaag ccaaatatcc gcatgcagtt cgatttctat cacgtgcaga ttgtcggcgg
     1741 cgacctgatc catcgtctcg agaaattcct tccagtaatt ggccacttgc aatgtgcggc
     1801 agtgccgtcg cgccatgagc cggacgaggg ggaggtgaac taccgggccg tattcgaagc
     1861 cgtggacaag ctcggctatc ggggttggat cggtgccgaa tatcgcccgc gcggccgcac
     1921 ggaagatggg ctcggctggg cgcgccaata cggtgtggcg ctcccgcata gatagccgac
     1981 tgatcttcaa acttcttgaa aactaacgct ttttttcttg cctgcgaggc gggcgttgct
     2041 agattgacgg tatgtgggaa cccaaggaaa acgatccgga gactcaaacc acggcaagcg
     2101 gcaatccgct gaaggatgct gttcgcgagg cgcgcatcga agccgccgaa cgctcgggag
     2161 tcgtcgtcga tctgcgcgat gccgacgtcg cgcggcttga gctgctcaac gatgcgctgg
     2221 atcccttgtt caaggaaatt cctgacgata tcgagctgtt cgatcgcggc gtcagcaaag
     2281 gcgacgtgcc gcggctctgg atcgatgttg tcgcgcacgt ggaaatgggt cgcgacaagc
     2341 ggcaataccg ttttatccag gatacccggt acggacgcgc aatcctggcg gaatcctacg
     2401 aggtgccggc aattgtgcag gctatcgcgc gttacgtggc gggccgaatg atcgaacgcg
     2461 agcgcaccct ctcaggcgat gccacgggcg gcgtcgcgca gtcggtcttg cggcggatgc
     2521 gaaacaagcg tcgctggcgc gccgtccgca ctttcatcta tgggctggtg gctggcgtcg
     2581 cggttttgtt cgcgctcgcc atgctcacaa attcgcagtc ctagccaatc agcgcgaagc
     2641 gtctttgttg cgcgacctcg ccggaggaag tgacgccgcg cgatatcagt tcgcattgcc
     2701 aggcgcctcg gctgccatcg a
//
LOCUS       DATDHO010000681         2006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_429041, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000681 DATDHO010000000
VERSION     DATDHO010000681.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429041"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..833
                     /locus_tag="VIY07_13150"
     CDS             <1..833
                     /locus_tag="VIY07_13150"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382738.1"
                     /translation="ITVDHATLSVGGRIVLADVSFKIEAGEFIGVLGPNGAGKTTLMR
                     AILGLLSPERGSLKVFGRTPERGNPEIGYLPQVRTVLPDLRVCGRDFIASSLYGERWG
                     LPLQSQHDGDAIEATLEAISARDLAARPLSEMSGGERQRLLLAQALIGHPKLLLLDEP
                     LISLDARHQEVAIDVVRTVCRERKITVLFSAHELNQLLGTLDRVLYLGNRQAVLGTVD
                     EVVNAPVLSRLYGTEIQVFRADGHIFVMSRGRDMERVDHMHDHDHGHGHNHDHGHHHH
                     "
     gene            778..1650
                     /locus_tag="VIY07_13155"
     CDS             778..1650
                     /locus_tag="VIY07_13155"
                     /inference="COORDINATES: protein motif:HMM:NF013143.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEY6382739.1"
                     /translation="MTMIMVMATTTIMGTTITDMFAYEFMTNAFAASGIAALVSGIVG
                     YFLVMRGQTFAGHALSHIGFAGATGAGLIGLAPLWGLLVFTLAAGIAMGALGERISNR
                     DVAIGVILALALGFGLLFLHYYTSFATQATTLLFGNVLAVDHSMIVTLAVLGLITLAA
                     LAAIMRPLIFATLQPELAEAKGVPMRFVSTAFLAIVALAVSQCAQIVGVLLVFTLMVG
                     PPAAAQRLTTGLWSGLVSSAALALAEAWLGLTMAYYTDWPVSFCIAALSALVYFASLM
                     TSTRMGPAHTAPAP"
     gene            complement(1671..>2006)
                     /locus_tag="VIY07_13160"
     CDS             complement(1671..>2006)
                     /locus_tag="VIY07_13160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HEY6382740.1"
                     /translation="IKLIDHADLAAKMNAKYGNLYAGSTIKAGTYPGQTTDNKSTVVW
                     NILVSNAKMSDQDAYTIVKTIFDKKADLVAVHGEAKNFLMENQVKDYSPIPWHPGAVK
                     YMTEHGAKM"
BASE COUNT          330 a          599 c          618 g          459 t
ORIGIN      
        1 tcatcaccgt cgatcacgcc acgctgagcg tcggcggccg catcgtgctt gccgacgtga
       61 gcttcaagat cgaagccggc gaattcatcg gcgtgctggg tccgaacggg gccggcaaga
      121 cgacgttgat gcgggcaatc cttggattgc tgtcgcctga gaggggcagc ctgaaagttt
      181 tcggtcgaac tcccgagcgc ggaaatcctg aaattggtta tcttccgcag gtgcgcacgg
      241 tgctccccga cctgcgggtg tgcgggcgtg acttcattgc cagttcgctc tatggcgagc
      301 gttgggggct gccactacaa agccagcatg acggcgatgc aatcgaggcc acgctcgaag
      361 ccatcagcgc ccgcgacctt gcagcgcggc cattgtcaga gatgtccggt ggagaacggc
      421 agaggctgct tctggcgcaa gcgcttatcg gacatccgaa actgctgctg ctcgacgagc
      481 ccttgatcag cctcgacgcg cgccatcagg aagtcgcaat tgacgtcgtg cgcaccgttt
      541 gccgcgagcg aaagatcacc gttttgttca gcgctcacga gctcaaccag ctgctcggta
      601 cgctcgaccg tgttctctat ctcgggaatc ggcaggcggt gctgggcacg gtagacgagg
      661 tggtcaacgc accggtgctg tcgcgattgt atggcaccga aatccaggtc tttcgcgccg
      721 acggccatat ttttgtgatg tcgcgcggcc gcgacatgga gcgagtggat cacatgcatg
      781 accatgatca tggtcatggc cacaaccacg atcatgggca ccaccatcac tgacatgttc
      841 gcttatgaat tcatgacgaa tgcgttcgca gcgtcaggca tcgctgcact tgtatcgggc
      901 atagtgggct attttcttgt tatgcgcggc cagaccttcg ccggtcacgc gctctctcac
      961 attggtttcg cgggagcgac cggcgccggc ttgatcggac ttgcgccact ctggggcctg
     1021 ctcgttttca cgttggcggc cggcattgcg atgggcgccc tgggcgagcg catcagcaat
     1081 cgcgatgtcg cgattggggt gatcctggcg ctggcgctgg gcttcggcct gctgtttctg
     1141 cactactaca cttcttttgc gacacaggcg acgacgctcc tgttcggcaa tgtgctggcg
     1201 gtcgatcatt cgatgattgt cacgctggcg gtccttggcc tgatcaccct tgcggccctc
     1261 gcggcgatca tgcggccgct gattttcgcc actctgcagc cggaactggc tgaggccaag
     1321 ggcgtgccga tgcgctttgt ctcgacagcc ttcctcgcca tcgtggcact ggcggtgtcg
     1381 caatgtgcgc agatcgtcgg cgtgctgctg gtgttcacat tgatggtcgg cccgcccgcg
     1441 gcggcgcagc gtctgacaac agggctctgg agcggactcg tctcgtcggc ggcccttgca
     1501 ctcgccgagg cctggcttgg cctgacgatg gcctactata ccgactggcc ggtgagcttc
     1561 tgcatcgccg ccttaagcgc gctcgtctat ttcgcgtctc tcatgacctc aacgcgaatg
     1621 gggccggcgc atacagcgcc ggccccatag tcgcgcgaga ttgcgcgtga ctacatcttc
     1681 gcgccgtgct cggtcatgta cttcacggcg cccgggtgcc acggtatcgg cgaatagtcc
     1741 ttgacctgat tttccatcag gaagtttttc gcttcgccat gtacggcgac gagatcggct
     1801 ttcttgtcga agatcgtctt cacgatggtg taggcatcct gatccgacat tttcgcattc
     1861 gaaaccagaa tattccacac aacggtgctc ttgttgtcgg tggtctgtcc cgggtaagta
     1921 cctgccttga tggtgctgcc cgcatagagg ttgccgtact tggcattcat cttggcggca
     1981 aggtcggcgt ggtcgatcag cttgat
//
LOCUS       DATDHO010000682         2481 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_280872, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000682 DATDHO010000000
VERSION     DATDHO010000682.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2481)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2481)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2481
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_280872"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..881)
                     /locus_tag="VIY07_13165"
     CDS             complement(72..881)
                     /locus_tag="VIY07_13165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HEY6382741.1"
                     /translation="MADDVYDIYAIRYGHHHRKSSENFIGGDPHDVPQPLDYFVWAIV
                     GAHCALIVDTGFDDIMAQKRQRQVTNPIREGLKAIEIDPETVENVIVTHLHYDHAGNY
                     ELFPRARYHLQDVEMGYATGRCMCHALLRFPFEVDDVVAMVRKVFAGRVEFHDGAGQI
                     APGITVHRVGGHSKGLQCVCVKTRRGDVVIASDATHLYAHIETGRVFPVTYNVGDVLE
                     GYTTIKKLAPTMRHIIPGHDPLVLTRYPAARPGLEGWVVRIDAEPKAAKSG"
     gene            1116..1514
                     /locus_tag="VIY07_13170"
     CDS             1116..1514
                     /locus_tag="VIY07_13170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382742.1"
                     /translation="MKDYPGPAWFARYRERVNADPELKVIGDWFTTTFALAFGDNRYA
                     LKIEKGRIVEIVAAPKFDLRVLFGFQAPVEVWRKFLSPNPPPLFHDFFAMLMRVPEFV
                     LEGDGLVAMQNARALHRMMNIMRETGAPNA"
     gene            1507..2346
                     /locus_tag="VIY07_13175"
     CDS             1507..2346
                     /locus_tag="VIY07_13175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6382743.1"
                     /translation="MPEFEPIIGRFFSVGIDGANHRIYVEEAGKGIPLLCLHTAGADS
                     RQYRHLLNDTAVTERFRIVAFDLPYHGRSTPPDGWWLKKYRLTTASYLEMVRAVWLTL
                     GLERPVVMGCSMGGAIALKVAAEYQDELTGIIGLESSAYAPGRYNELLHHPAIHGGEL
                     AASYTYGLNSPFSPEASRRENWWYYSQSGPGVYQGDVYFYSVDWDGRDDIKRIDTNRC
                     KVALLTGEYDYSCTPEMSEAVAAAVPGSCLTIMKGMGHFPMVENYPGFRPYLLAALDH
                     VAA"
BASE COUNT          505 a          756 c          711 g          509 t
ORIGIN      
        1 aatgatatcg agcgccttgc aagcttgcgg gaactgccgt tggtggcccg ggtctgatcg
       61 tacaacccgc actagcccga ttttgctgcc ttgggctccg catcgatccg cacaacccaa
      121 ccctcgagcc ctggtcgtgc agccggatag cgggtaagca ccagtggatc atggccgggt
      181 atgatgtggc gcatggtcgg cgccaacttc ttgatcgtcg tatagccttc caaaacgtcg
      241 ccgacattgt aggtcacggg aaacacccgg ccagtttcga tatgggcgta caggtgcgtt
      301 gcatcggacg cgatcacgac gtcgccgcgc ctggtcttca cgcagacgca ttgcaggccc
      361 ttggagtggc cgccgaccct gtgcaccgtg atgccggggg cgatctgacc ggcgccgtca
      421 tgaaactcaa cgcggcctgc gaacaccttg cgcaccatgg cgacaacatc gtcgacttca
      481 aaagggaaac gcagcaaagc atggcacatg caacgcccag tcgcataacc catctcaaca
      541 tcctgcagat ggtagcgcgc gcgcggaaac aattcgtagt tgccggcatg gtcgtagtgc
      601 aggtgtgtga cgataacgtt ctcgaccgtc tccgggtcaa tctcgatcgc cttcagcccc
      661 tctctgatcg gatttgtgac ctggcgttgg cgcttctgcg ccatgatatc gtcgaagcct
      721 gtgtctacga ttaaggcgca gtgtgcgccg acgatcgccc agacaaagta atcgaggggc
      781 tgtgggacat cgtgcgggtc gccgccaatg aaattctccg acgatttgcg gtggtgatgc
      841 ccgtaacgaa tggcatagat atcgtaaacg tcgtcggcca tggtctcacc cagactcctt
      901 cgcacgcacc tccacgcccg cccagcgctc gacgcactga acgacgctgg tgaagtcctt
      961 atccgccccg aattcactag ccgaaagctg gaacatcaga cggaccgcgt tgcgaagtaa
     1021 tcttacgcgg acggtcgcat gccgtgcgca taaatgctat tcaaactcgc ttttttacat
     1081 cggtatggtg ctggacagcg agaacgggag gaaccatgaa agactatccc ggccctgcct
     1141 ggtttgcccg ctatcgcgag cgggtgaatg ccgatcccga actcaaggtt atcggcgact
     1201 ggtttaccac gacgttcgct ctggccttcg gcgataaccg ctatgccctc aaaatcgaaa
     1261 agggccgtat cgtcgagatc gtcgccgcgc ccaaattcga tttgcgcgtc ctgttcggat
     1321 ttcaggcgcc agttgaagtt tggcgcaagt tcttgagccc caatccgccg ccgttgttcc
     1381 acgacttctt cgccatgctg atgcgggtac cagagttcgt gctcgagggc gacgggctgg
     1441 tggctatgca gaacgctcgc gccctgcatc gcatgatgaa catcatgcgc gagaccggag
     1501 cgcctaatgc ctgaatttga gccgatcatc ggacgatttt tttccgtcgg catcgacggc
     1561 gccaaccacc gcatctatgt cgaggaggct ggcaagggaa ttccattgct gtgcctccat
     1621 acggccggcg ccgatagccg acaataccgc catctattga acgatacggc ggttaccgaa
     1681 cggtttcgga ttgttgcctt cgacctgccc tatcatggcc gctcgacgcc gccggacggc
     1741 tggtggttaa aaaaataccg gttaacgacg gcgtcatatc tcgaaatggt ccgcgcggta
     1801 tggctcaccc tcgggctcga gcggccggtc gtcatgggtt gctcgatggg cggcgccatc
     1861 gcactcaagg tcgccgccga gtaccaggac gagctcaccg gcatcattgg actggaaagc
     1921 tcggcctacg caccgggacg ctacaacgag ctgctccatc atcccgccat ccacggcggt
     1981 gagttggcag cgagctacac atacggcctc aactcgccgt tcagtccaga agcatcgcgg
     2041 cgtgaaaact ggtggtacta cagccagtcc ggaccgggcg tctatcaggg cgacgtctac
     2101 ttctacagcg tagattggga tggtcgtgac gacatcaagc gcatcgatac aaaccgctgc
     2161 aaagtggcgc tgctcaccgg cgaatacgat tattcctgta cgcctgagat gagcgaggct
     2221 gtggccgcgg ccgtccccgg gtcgtgcctt accatcatga agggcatggg ccattttccg
     2281 atggtcgaga actatcccgg attccggccc tatcttttgg ccgcgcttga ccatgtagcc
     2341 gcctaagcga agtaatgcca cgcgctttgt tcgcccacct ccccagcacc aggaaatcgg
     2401 aacgaacggc agcgcgtggc agacttctca gttcttcggc caaattggct tcgcaagcgc
     2461 cgacgccgtc ggatagaccg t
//
LOCUS       DATDHO010000683         8246 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_429102, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000683 DATDHO010000000
VERSION     DATDHO010000683.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8246
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429102"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..215)
                     /locus_tag="VIY07_13180"
     CDS             complement(<1..215)
                     /locus_tag="VIY07_13180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEY6382744.1"
                     /translation="MSILVDKNTRVICQGFTGKNGTFHSQAAITYGTKMVGGTSPGKG
                     GSTHLGLPVFDTVAEAKEKTGCDASVI"
     gene            complement(226..669)
                     /locus_tag="VIY07_13185"
     CDS             complement(226..669)
                     /locus_tag="VIY07_13185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382745.1"
                     /translation="MIRHVFALAILGAVATPAPAQEAIPDLKGTWTGKGKSIVFGNNA
                     HHTGKQSTSSPPRVRDIEAIHVVEGQDGRLAWGRSSSAAADTKEPFAWAIASDNKSIV
                     GADVDGYFRITIMSPDRIEKCYAQNAARPSRAIVASCQVMDRVKR"
     gene            complement(699..1868)
                     /gene="sucC"
                     /locus_tag="VIY07_13190"
     CDS             complement(699..1868)
                     /gene="sucC"
                     /locus_tag="VIY07_13190"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEY6382746.1"
                     /translation="MNIHEYQAKAVLREFGVPVPRGVPAFSVEEAVKGAQELGGPVWV
                     VKAQIHAGGRGKAGGVKVVKSIDDVKKESARILGSTLVTHQTGPHGKKVNRLYIEEGS
                     AIDREFYLSALIDRETSRVAFVVSTEGGMDIEEVAHKTPEKILTFSVDPATGIMPHHG
                     RRVAQALKLTGDLAKQIEAILPKLYSAFTTKDMSLLEINPLVVTKDNQIVCLDAKVGF
                     DGNALYRHPDVVALRDLTEEDEKEIEASKYDLSYIALDGSIGCMVNGAGLAMATMDII
                     KLYGMAPANFLDVGGSATKERVTAAFKIITSDPNVKGILVNIFGGIMKCDVIAEGVVA
                     AVKEVGLKVPLVVRLEGTNVELGKKIITESKLNVTSGDDLDDAAQKIVKAVKGNQ"
     gene            complement(1943..2908)
                     /gene="mdh"
                     /locus_tag="VIY07_13195"
     CDS             complement(1943..2908)
                     /gene="mdh"
                     /locus_tag="VIY07_13195"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEY6382747.1"
                     /translation="MARNKIALIGAGQIGGTLAHLIGLKELGDVVLFDVMEGIPQGKA
                     LDIAQSSPINDFDAKFIGTNSYDAIEGADVCIVTAGVPRKPGMSRDDLLDINLKVMGQ
                     VGSGIRKYAPESFVICITNPLDAMVWALQKSCGLPQQKVVGMAGVLDSARFRYFLADE
                     FHVSVEDVTAFVLGGHGDTMVPLTRYSAVAGIPVPDLVRMGWTTQSRIDEIVKRTANG
                     GAEIVNLLKTGSAFYAPAASAVAMAESYLRDKKRVLPCAAWLNGEYGIKDLYVGVPVV
                     IGAKGVERIVEIELNSAERAMFEKSATAVQGLVEACKKIAPSLAN"
     gene            complement(3100..4272)
                     /gene="zapE"
                     /locus_tag="VIY07_13200"
     CDS             complement(3100..4272)
                     /gene="zapE"
                     /locus_tag="VIY07_13200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HEY6382748.1"
                     /translation="MSETLSTRYAALIAAGKIEADPGQATLARHLAALERRLEEHRLA
                     RKSSSLGWLFGKREQAGPPLKGLYIYGEVGRGKTMLMDLFFESSTVVRKRRVHFHEFM
                     ADVHERVHTFRQELKNGEGNEFDPIQRTAAAIAEESWLLCFDEFHVTDIADAMILGRL
                     FTRLFELDVVMVATSNLAPSDLYKDGLNRALFLPFLALLERHCDVVRLEARIDFRLEK
                     LTGVPTWYVPDDAKAEIALDDAWRRLAGDAGAPHELVVKGHVVRVPKAAMGVARFSFD
                     DLCAQPLAAGDYLRIAHEFHTIILDHIPVMGYEQRNEAKRFIILIDTLYDHAVKLLAS
                     AQAQPNELYLATDGYEATEFKRTASRLIEMRSQSYLGLPHGSRQGPDLEIAKIVET"
     gene            4546..5109
                     /locus_tag="VIY07_13205"
     CDS             4546..5109
                     /locus_tag="VIY07_13205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6382749.1"
                     /translation="MPDGGMIRKMWVGETDAYRDHLLRLDRESRHRRFSGAVSDEFIA
                     QHAASAGKLGVVLHGFFVDGVLRGAAELRSVGSFFARAGEAAFSIEQPWQSHGVGTVL
                     LERTLLSARNRGMNLLQMHCLAENSRMQQLARKFEADLKFDFGSVVGEVDPPRYTPLS
                     LMREAVADAHGVTTAWLDAQSRMFGVA"
     gene            complement(5111..5671)
                     /gene="thpR"
                     /locus_tag="VIY07_13210"
     CDS             complement(5111..5671)
                     /gene="thpR"
                     /locus_tag="VIY07_13210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HEY6382750.1"
                     /translation="MPRLFTGVEIPPDVGQALATLRGGLPGARWIDPENYHLTLRFIG
                     DVDDSVAHEVASMLGRVKRGPFELHMEGLTSFGGRKPRAVVASVAPIQPLIDVQAEHE
                     RLMQRIGLEPEGRKFTPHVTLARLRESSSQQVAEYLSARGYFRTSPFRVSRFVLFSSR
                     ASVGGGPYVVEASYPFITDLVTSRSQ"
     gene            complement(5687..6385)
                     /locus_tag="VIY07_13215"
     CDS             complement(5687..6385)
                     /locus_tag="VIY07_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEY6382751.1"
                     /translation="MEPHFSQPRSYGTNTLRVQRLAGALLALFCVVTPAAGVETSERP
                     VNIVVLGDSLSAGLGLPVEHAFPARLAAALKAKGVSATITNAGVSGDTASGGLARLDW
                     SVPDGTDAVIVELGANDALRGLDPNVTKRALDAILRKLTTRHITVLLAGMRAPPNMGQ
                     EYTKAFDGIYPALASTHPVVFYPFFLDGVAADPKLNQRDGLHPNGAGVDAIVSRILPR
                     VEELIVRARAGRSS"
     gene            6384..7082
                     /locus_tag="VIY07_13220"
     CDS             6384..7082
                     /locus_tag="VIY07_13220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382752.1"
                     /translation="MTNNSQAGPAIALAGVNLSLGHGAARVHILKDIDLHIGRGEAIG
                     LVGPSGSGKSTLLMVMAGLERADSGTVAVAGENLSTLDEDALARFRGRNIGIVFQSFH
                     LIPTMTALENVAVPLELAGIADAHDRARDELAALGLSERLDHYPVELSGGEQQRVAIA
                     RALAPDPAIVVADEPTGNLDEDTGKQIIDLLFAGHARRRTTLVLVTHDPALAARCARV
                     VRLRSGRIDGVTRP"
     gene            7079..>8246
                     /locus_tag="VIY07_13225"
     CDS             7079..>8246
                     /locus_tag="VIY07_13225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEY6382753.1"
                     /translation="MSARKITSPSGPSLSFRYALREMRGGLHGFYVFIICIALGTMAI
                     AGVSSLAASLAEGLSREGRVILGGDLAFTLIHREAAPNERAFLDKQGRVSSAATMRAM
                     ARAPNGQATLVEIKAVDALYPLFGQTALDPPGTLDAALAQSEGVFGAVADPTLMARLD
                     ISIGAHLSVGGATFEIRAALASEPDKLASGIGFGPRLLVSQDALRATGLIQPGSLVRW
                     HYRLRLPANDASDAAAKAVATQARTQLPEAGWDIRSRSNASPQLERNVERFTQFLTIV
                     GLTALLVGGVGVGNAVKSHLDRRRDTIATMKALGASGRRVFAIYLTQVMVVALASGLV
                     GAALGATLPFAISWMFGAIIPLPLVPALHLDELLLAVFYGSLAALVFALWPLGRA"
BASE COUNT         1583 a         2498 c         2477 g         1688 t
ORIGIN      
        1 tatatgacac tcgcgtcgca cccggttttt tccttcgcct cggcgactgt atcgaacacc
       61 ggcagaccga ggtgcgtcga accaccttta ccgggcgacg tgccgccgac catcttggtg
      121 ccgtaggtga tcgccgcctg cgaatggaag gtgccgttct tgccggtgaa accctggcag
      181 atgaccctgg tgtttttgtc gacgaggatg gacattcgta gcttcttacc gtttcacccg
      241 atccatgacc tgacatgacg cgacaatcgc gcggctcggg cgtgccgcgt tctgcgcgta
      301 acatttctct atgcggtcgg gcgacataat cgtgatccgg aagtaaccgt ccacatccgc
      361 gccgacgatt gacttgttgt cgcttgcgat cgcccaggca aacggctcct tggtgtcggc
      421 agccgcggat gaggagcggc cccaggccaa tcgtccgtcc tgaccttcaa caacatggat
      481 cgcctcaatg tcgcgcacgc gcggcgggct ggatgtcgac tgcttgcctg tatggtgggc
      541 gttgttgccg aagacgattg acttgccttt tccggtccag gtccccttga gatcgggaat
      601 ggcctcctgc gcgggtgcag gcgtcgcaac ggcgccgagg attgcaagcg cgaaaacgtg
      661 acggatcatc gtttccctcc tgtgcctggt cgaaacgttc attgattgcc cttcaccgcc
      721 ttcacaatct tctgggcggc atcgtcgaga tcatcgcccg acgtcacgtt tagcttggat
      781 tcggtaatga tctttttgcc gagctcgaca ttggtgccct ccagacgcac aaccagcggc
      841 actttcagtc cgacttcctt gaccgcggcg accacgcctt cggcgatcac gtcgcatttc
      901 atgatgccgc cgaatatgtt gaccagaatt cctttcacgt tcggatcgga cgtgatgatc
      961 ttgaacgccg ccgtgaccct ttctttcgtg gcgctgccgc cgacgtcgag gaagttggcc
     1021 ggcgccatgc catagagctt gatgatgtcc atggtcgcca tcgctaggcc ggcgccgttg
     1081 accatgcagc caatcgagcc atcgagcgcg atgtagctga ggtcgtattt cgaggcctcg
     1141 atttccttct cgtcttcctc ggtcagatca cgcaatgcga cgacgtcagg gtgacggtag
     1201 agcgcattgc cgtcgaaccc gaccttggca tcgaggcaaa cgatctggtt gtccttggtg
     1261 accaccagcg ggttgatctc aaggagactc atgtccttgg tcgtgaaggc agaatagagc
     1321 ttgggcagaa ttgcctcgat ctgctttgcg agatcgccgg tcagcttgag cgcctgcgcc
     1381 acgcgccggc catgatgcgg catgattcct gtcgccggat cgaccgagaa tgtgaggatt
     1441 ttctcgggcg tcttgtgggc gacttcctcg atatccatgc cgccttccgt ggaaacaacg
     1501 aacgcgacac gcgaagtctc gcgatcgatg agcgccgaca ggtagaattc gcgatcaatc
     1561 gccgacccct cttcgatata gagccggttg accttcttgc catgcgggcc ggtctggtgc
     1621 gtgaccagag tcgacccgag aatgcgcgcc gattcttttt ttacgtcatc gatggatttg
     1681 acgaccttga cgccgcccgc ctttccgcgc ccgccggcat gaatctgcgc cttcaccacc
     1741 cacacgggcc cgcccagctc ctgtgcgccc ttgaccgctt cctcgacgct gaaggcagga
     1801 acacctcgcg gcactggaac gccgaattcg cgcaatacag ctttggcttg gtactcgtgg
     1861 atgttcatga gcctctccgg ccgacagcag cgaacagaga atagcgacag cgctattcgt
     1921 tatttggcat tccttcttcg ccctaattcg ccagactggg agcgatcttc ttgcaggcct
     1981 cgaccaggcc ctgcaccgct gtcgccgatt tttcgaacat cgcccgttca gcgctgttga
     2041 gctcgatctc gacaatgcgc tctacgcctt ttgcgccgat caccaccggc acgcccacgt
     2101 agaggtcctt gatgccatac tcgccgttga gccaggcagc gcaaggcagc actctcttct
     2161 tgtcacgcag gtagctttcg gccatcgcga ccgcggacgc cgccggcgcg taaaaagccg
     2221 aaccggtctt gagcagattg acaatctctg cgcccccgtt tgcggttcgc ttcacgattt
     2281 cgtcgatgcg cgattgcgtg gtccagccca tcctcacgag gtccggcacg ggaatgcccg
     2341 cgaccgcgga atagcgcgtg agcggcacca tggtatcgcc atggcctccg agcacgaacg
     2401 ccgtgacatc ctccaccgag acatggaatt cgtcggcaag gaaatatcgg aagcgcgcgg
     2461 agtcgagcac gcccgccata ccgaccactt tctgttgtgg caggccgcaa cttttctgca
     2521 gcgcccagac catggcatcc agaggattgg tgatgcagat cacgaaggac tcgggtgcgt
     2581 attttcttat tcccgaaccg acctggccca tcactttgag attgatgtcc agcaaatcgt
     2641 cccggctcat gccaggcttg cgtggcacgc cggcggtgac gatgcagacg tcggcaccct
     2701 cgatggcgtc atagctgtta gtgccgatga attttgcatc gaaatcattg atcggtgacg
     2761 actgggcgat atcgagagcc ttgccttggg ggataccctc catgacgtcg aacagcacga
     2821 cgtcgccgag ttccttcaat ccaataaggt gggccagcgt gccgccgatc tggccggcgc
     2881 cgatcaacgc aatcttgtta cgcgccatgg tgggaaaact ctcgacttgt gcggcccgct
     2941 gagcgcggcc ggagtggtgg ttaaccggtt aggtctggcc cgacaagaag ccgaaactcg
     3001 gaaggttcag tgttgcaatc ttgtatacat tataccagca gaccaaggag tgggagtcca
     3061 gaggcaagtg gctgtcgggc cgggggcaga agtgttgact caggtttcga cgattttggc
     3121 tatctcgaga tcgggacctt ggcgagagcc atgcggaagg ccgagatatg attgcgagcg
     3181 catctcgatc aggcgggagg cggtgcgctt gaattcagtg gcttcgtaac cgtcggtggc
     3241 gagataaagc tcgtttggct gcgcctgcgc agaggccagc aacttcacgg catgatcgta
     3301 aagcgtgtcg atcagaataa taaagcgctt ggcttcgttg cgctgctcgt aacccatcac
     3361 cgggatgtgg tccagaatga tggtgtgaaa ttcgtgcgcg atccggagat agtcaccggc
     3421 cgcgagcggc tgcgcgcaaa gatcatcgaa tgaaaatcgc gccactccca tcgcagcctt
     3481 cggcacacgg accacatggc ctttcaccac gagctcgtgc ggcgccccgg catcgcccgc
     3541 cagccgccgc catgcatcgt cgagcgcgat ctcggccttg gcgtcatccg gcacgtacca
     3601 ggttgggacg ccggtaagct tttccagcct gaaatcaatt cgtgcctcga ggcgcacaac
     3661 atcacaatga cgttccagca acgcaaggaa aggaaggaag agagcgcggt tcagcccgtc
     3721 cttgtagaga tcgctcggcg cgagattcga tgtcgcgacc atgacgacgt cgagttcgaa
     3781 cagtcgtgtg aagagacggc cgaggatcat tgcgtcagcg atgtcggtga catggaattc
     3841 gtcgaagcaa agcagccagc tctcttctgc tatcgcagcc gcggtgcgct ggatcggatc
     3901 gaactcattg ccctcaccgt tcttgagctc ttgccggaag gtatgaacac gttcatgcac
     3961 gtcggccatg aattcgtgga aatgaacgcg tcgtttgcgg acgaccgtgc tgctctcgaa
     4021 gaacagatcc atcaacatgg tcttgccgcg gccgacctcc ccgtagatgt aaaggccttt
     4081 gagcggcggc ccggcttgct cgcgctttcc aaacaaccag ccaagcgatg acgatttacg
     4141 cgccagccga tgctcctcga gccgccgctc gagcgcagcc aggtgcctgg ccaatgtggc
     4201 ctgacccgga tccgcctcga tctttcccgc ggcgatcaaa gccgcatagc gggtgctgag
     4261 agtttcggac atgcgtcagg gtaattggga tagataacgg cggcctcgtt gcgacaccta
     4321 tgaggaatgg acccaggtgt aatcagacgt ccaatcgttg ccgttttttt gcgcacaagc
     4381 atgcggtaac cctttgagga ggcatgcggt ttttgcaaat gagggtttcc ggaacttttc
     4441 gggccgattt tttgctgcaa tgcatcatat atgtagtcgc agggcgattc gccggcggac
     4501 gtgcactgcc aaaccggcaa gaggagaatt cacatggacg agcctttgcc cgacggcggc
     4561 atgatccgca aaatgtgggt cggcgaaacc gacgcatatc gcgatcatct ccttcgtctt
     4621 gatcgcgaaa gccggcaccg gcgcttttca ggcgcggtat ccgatgaatt catcgcccag
     4681 cacgcggcct ccgccggtaa gctgggtgtt gtgctccatg gcttttttgt agatggcgtc
     4741 ttgcgcggcg cggcggaact gcgctccgtt ggatcgtttt tcgcgcgagc tggagaagcc
     4801 gccttcagca tcgagcagcc ctggcaaagc catggcgtcg gcacggtact gctcgaacgg
     4861 acccttttga gcgcgcgcaa ccgcggcatg aacttgctgc agatgcattg cctggccgaa
     4921 aacagccgca tgcaacagct tgcccgcaaa tttgaagccg atctcaaatt tgatttcggt
     4981 agcgtggtcg gcgaagtcga cccgccgcgt tacaccccgc tgtcgctgat gcgcgaggct
     5041 gtcgccgacg cccatggtgt gaccaccgcc tggctggacg cgcagtcgcg tatgttcggg
     5101 gtcgcctgat tcattgcgag cgtgacgtca caaggtcagt aatgaatgga tagctcgcct
     5161 cgaccacata cggcccaccg ccgacggagg cgcgcgagga aaaaagcaca aaacgagaga
     5221 ccctgaacgg cgatgtccgg aaatagcccc gcgctgaaag atattccgca acctgttggc
     5281 tggacgattc ccgcagacgc gccagcgtga cgtgcggcgt gaattttcgt ccttccggct
     5341 caagcccgat gcgttgcatc agccgttcgt gctcggcctg cacatcgatg aggggctgta
     5401 tcggcgcgac gctcgctacg acagcgcgtg gcttacgccc tccaaacgac gtcagacctt
     5461 ccatgtgcag ctcgaaaggc ccgcgtttca cacgtccaag catcgaggca acttcatggg
     5521 cgacgctgtc atcgacgtcg ccaatgaaac gtaatgtcag atggtagttt tccggatcga
     5581 tccagcgcgc acccggcagg cctccgcgca gcgtcgcgag tgcctgtccg acatcgggcg
     5641 gaatttcaac cccggtaaaa aggcgcggca ttgcgaagct ctcaaatcac gacgagcgcc
     5701 cagcgcgcgc tctaacaatc aactcctcga cccgcggcag gatgcgcgac acgatggcat
     5761 caacacctgc gccgttcgga tgcaggccat cccgctggtt cagtttggga tcggcagcaa
     5821 cgccgtcgag gaagaaagga taaaagacaa ccgggtgagt cgaggcaagc gccggataaa
     5881 tgccatcaaa cgccttcgta tactcctgac ccatgtttgg cggagcccgc atgccagcga
     5941 gcaagacagt tatgtgacgg gtcgtcagct tgcgcagaat agcatcaagc gcgcgtttgg
     6001 tgacgttggg gtcgaggccg cgcagtgcat cgttggcgcc cagttcgaca atgaccgcgt
     6061 cggtcccgtc cggaaccgac cagtcgagcc gggcgagccc gcccgaagcg gtatcacccg
     6121 acacacctgc attcgtaatc gtggcgctaa cgcctttggc tttcagggcc gcggccagcc
     6181 tggccggaaa cgcgtgttcg acaggcagac ccagccccgc gctgagcgag tcgccgagca
     6241 cgacaatgtt gaccggccgt tcagaggtct ctacccccgc ggccggcgta accacgcaga
     6301 acagtgcaag cagcgccccc gcaaggcgct ggacccggag ggtattcgtc ccatatgagc
     6361 ggggttgcga aaaatgaggt tccatgacga ataactccca ggcgggaccg gccatagcac
     6421 tggccggtgt caatctctcg ctcgggcatg gcgcggcccg tgttcatatc ctcaaagaca
     6481 tcgacctgca tataggcaga ggcgaggcaa ttggcctggt gggtccgtcc ggatccggca
     6541 aatcgaccct gctgatggtg atggcggggc tcgaacgcgc ggacagcgga acggttgcag
     6601 tcgcgggcga aaacttgagc accctcgacg aggacgccct ggcgcggttt cgcggccgaa
     6661 atataggaat tgtgttccaa tcgttccacc tgatcccgac catgactgcg cttgagaacg
     6721 ttgcggtccc gctcgagctg gcgggcatcg ccgacgcgca cgatcgggca cgcgacgaac
     6781 tcgctgcgct cggcttgagc gagcgactcg accattatcc tgttgagctc tcgggcggtg
     6841 aacagcagcg cgtggcgatc gcgcgcgcgc tcgcacctga tccggcaatt gtcgtggccg
     6901 acgagccgac cggcaatctc gacgaagaca ccggcaagca gatcatagat cttctgttcg
     6961 ctggacacgc caggcgcagg accacgctcg tgctggtcac ccacgatcca gcgctggcag
     7021 cgcgctgcgc gcgtgtggtg cggctgcgct cagggcgaat tgatggtgtg acacggccat
     7081 gagcgcacga aaaataacca gtccctcagg cccctcactg tccttccgct acgccttgcg
     7141 cgaaatgcgc ggcggcttgc acgggtttta tgttttcatc atttgcatcg cgctcgggac
     7201 catggcgatc gccggcgtca gctcgctggc ggcaagcctt gccgagggcc tttcgcgcga
     7261 aggccgagtc attctcggtg gcgatcttgc tttcacattg atccatcggg aggccgcgcc
     7321 gaatgagcgc gcattcctcg ataagcaagg tcgcgtttca agtgcggcaa caatgcgcgc
     7381 catggcgcgc gcgccaaatg ggcaagcaac gctggttgaa ataaaggctg tggatgcgtt
     7441 gtaccctctg ttcggacaga ctgcgcttga tccgcccggc acgcttgacg cggcgctggc
     7501 acaaagcgag ggcgtttttg gcgccgttgc cgacccgacc ttgatggcgc ggcttgatat
     7561 ctcaataggc gctcatctca gtgttggtgg cgcaacattc gagattcgag cggcgctggc
     7621 gagcgagccc gacaagcttg ccagcggcat cgggttcggt ccccggctgc tggtgagcca
     7681 ggacgcgttg cgcgccacag gcctgataca gcctggcagc cttgtgcgat ggcattaccg
     7741 attgcgtctg ccggcaaatg acgcgtccga cgcggcagca aaagcggtcg cgactcaggc
     7801 gcgcacgcaa ttgccggaag ctggttggga tatccgcagc cgcagcaatg cctcgccgca
     7861 actcgaacgc aatgtcgagc gttttaccca attcctcacg attgtcggtc tgaccgcgct
     7921 tcttgttggc ggtgtcggtg tcggcaatgc cgtcaagagt catctcgacc gacgccgcga
     7981 cacaattgcg accatgaagg ctctcggtgc cagcggacgg cgtgtattcg ccatttacct
     8041 tacgcaggtc atggttgtgg cgcttgccag tggactggtc ggtgcggcgc tcggcgccac
     8101 cttgccattt gcgatttcct ggatgttcgg cgcaatcatt ccgctgccgt tggtacccgc
     8161 attgcatctc gatgaactgc tgctggcggt tttctacggg tcgctggcgg ccctggtttt
     8221 cgcgctgtgg ccgctgggac gagccc
//
LOCUS       DATDHO010000684         1750 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_379185, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000684 DATDHO010000000
VERSION     DATDHO010000684.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1750
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379185"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..361)
                     /locus_tag="VIY07_13230"
     CDS             complement(<1..361)
                     /locus_tag="VIY07_13230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011582130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6382754.1"
                     /translation="MLAETLAVVMVIAVVAALMAGYPVALTLAGVSLIFAVLGSIFGV
                     MSFAILGALPQRIFGVMTNEVLLAIPLFIFMGVMLERSRIAEDLLETMARLFGPLRGG
                     LGISAVIVGTLLAAAKGV"
     gene            complement(361..876)
                     /locus_tag="VIY07_13235"
     CDS             complement(361..876)
                     /locus_tag="VIY07_13235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008551693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY6382755.1"
                     /translation="MSFSHMTALADRIDRLTSGIGRAATWLVLLVVLLQFALVVARYL
                     FGLGSVWLTEAVIYAHAALFMLAAAWTLLAGGHVRVDLFYAEASERTRAMVDLIGALA
                     LLLPFMLVLLWLSVPYAARSWAIFEHSQEASGLPIVFVLKTLIPLFALLMALQGVSQA
                     IRAAASLSRAR"
     gene            924..1556
                     /gene="nthA"
                     /locus_tag="VIY07_13240"
     CDS             924..1556
                     /gene="nthA"
                     /locus_tag="VIY07_13240"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HEY6382756.1"
                     /translation="MSDHDHDHDHDHEHSELSETQLRVRALETVLTEKGYVDPAALDL
                     LIETYEKKIGPRNGARVVAKAWVDPAYRARLFKDATPAVAEIGYAGRQGEHIVALENT
                     PKLHNIVVCTLCSCYPWPVLGLPPVWYKSAPYRSRTVANPREVLADFGVTLPKDTEIR
                     IWDSTAEIRYLVVPMRPAGTEGWNEEKLAELVTRDSMIGTGLPKSPQDLK"
     gene            1553..>1750
                     /locus_tag="VIY07_13245"
     CDS             1553..>1750
                     /locus_tag="VIY07_13245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit beta"
                     /protein_id="HEY6382757.1"
                     /translation="MNGAQDMGGKHGFGPVQPEQNEPVFHADWEKRAFALTLAMGMPG
                     GWNIDMGRFARENRPPAEYLSM"
BASE COUNT          403 a          557 c          537 g          253 t
ORIGIN      
        1 caacaccttt ggcggcggcg agcagcgtgc cgacgatgac ggccgaaatg cccaggccgc
       61 cccgcaaagg accgaacagg cgggccatgg tttccagcaa atcttcggcg atgcgcgaac
      121 gctcaagcat cacgcccatg aaaatgaaca ggggtatcgc caacagaact tcattggtca
      181 tcacgccaaa gatccgctgc ggaagcgcgc caaggatggc gaagctcatg acgccgaaga
      241 tgctgcccag caccgcgaat atcagcgaca cgccggcaag tgtcagcgcg accgggtaac
      301 cggccatcaa tgccgcgacg acggcgataa ccataacgac cgcgagtgtc tcggcaagca
      361 tcagcgcgcc ctcgatagcg acgcggccgc gcggatcgcc tgcgaaacgc cttgcaaagc
      421 catcagcagc gcgaacagcg gaatgagagt tttaagaacg aacacgatcg gcaggccgct
      481 tgcttcctgc gagtgttcga agatggccca cgagcgcgcg gcatagggca ccgacagcca
      541 gagcagcacc agcatgaaag gcagcagcag cgccagcgcg ccgataagat cgaccattgc
      601 cctggtgcgt tccgatgcct ccgcataaaa caaatcgacg cgcacgtggc caccggccaa
      661 aagcgtccag gccgctgcca acatgaacag cgcggcgtga gcatagataa ccgcctcggt
      721 aagccagacg gaaccaagcc cgaacaggta acgcgcgacc accagcgcga actgcagcag
      781 cacgaccaaa aggacaagcc atgtcgcggc gcggcctatg cccgacgtca ggcggtcgat
      841 acggtcggca agcgcggtca tatgcgaaaa actcatgacg ccgatgatgg cacaaagccg
      901 cagcttttgc ttatagtggg tgcatgtccg atcacgatca cgatcacgac catgaccacg
      961 agcattccga actgtcggaa acccagctgc gtgtgcgcgc gctggaaacc gtgctcaccg
     1021 aaaagggcta tgtcgatccg gccgcactcg acctcctgat cgagacttac gaaaagaaaa
     1081 tcggcccgcg caacggcgcc cgcgtcgtgg cgaaggcctg ggttgaccct gcctatcgcg
     1141 cgcgattgtt caaggacgca acgcccgcag ttgccgagat cggctacgcg ggacggcagg
     1201 gggagcatat cgtcgcgctg gagaatacgc cgaagctgca caacatcgtc gtgtgcacgc
     1261 tgtgctcctg ctatccgtgg ccggtgctgg gattgccgcc ggtctggtac aagtcggcac
     1321 cctatcgctc gcgcaccgtc gccaatccac gcgaggtcct cgcggacttc ggcgtgaccc
     1381 ttccgaagga cactgaaatc cgcatctggg attcgaccgc ggagattcgc tatctggtcg
     1441 tgccaatgcg gcccgcgggc accgaaggct ggaacgagga gaagctcgcc gagcttgtca
     1501 cgcgcgattc catgattggc accggtctgc cgaaatcgcc acaggatctg aaatgaacgg
     1561 cgcgcaggac atgggcggca agcacggctt cgggccggtc cagcctgaac agaacgagcc
     1621 ggtgttccac gccgactggg aaaagcgcgc cttcgcgctc acgctcgcaa tgggcatgcc
     1681 cgggggctgg aacatcgaca tgggccgctt cgcgcgcgag aaccggccgc cggcggaata
     1741 tctttcgatg
//
LOCUS       DATDHO010000685         1613 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_474407, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000685 DATDHO010000000
VERSION     DATDHO010000685.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1613
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_474407"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..647)
                     /locus_tag="VIY07_13250"
     CDS             complement(<1..647)
                     /locus_tag="VIY07_13250"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HEY6382758.1"
                     /translation="MASTVKIKPVADLNDSPYQVQVLDRALGILDSLSKEGPELGPAE
                     LSEKLDLHKSTVHRLLMVLERHRLIERGPLNGKYRLGMKLFELGSQAVAHLDLRERAK
                     PYLESVVSETGETAHICILNGDRMLSIINVESPHTLRTPSTVGQRTPLHCTSVGKTLL
                     AFLPEDEADELINKCELTRYTDRTLTTRMRLKAELKLIRRRGYAMDNGEIEEGLR"
     gene            complement(747..>1613)
                     /locus_tag="VIY07_13255"
     CDS             complement(747..>1613)
                     /locus_tag="VIY07_13255"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6382759.1"
                     /translation="GLWLVMAWKSGAFPVTFAVIGDALPQGRRVLAFSVQSVLVRLPR
                     VIGAPLGGLLIASFGAITGVRIAAGITLLLALLVLITQRHGYLEQTIAERHFENAPAL
                     AILARMPPALKRLLVAECLVRFGEAVAAAFIVLYVTNVLGHSAPAFGMLYALQQAVSL
                     MMYLPSGKLADLAGRRPIIAMTFLCFALFPLAVQWADSFTALVVAFVIGGLKEMGEPA
                     RKAFIVDLADPPERARAVGIYYTIRNLLIVPAGAIGGILWTYDPHVPLQVAGAVGLLG
                     LALFWITSRERS"
BASE COUNT          360 a          480 c          449 g          324 t
ORIGIN      
        1 cagcgcagcc cttcctctat ctccccatta tccatcgcat agccgcgccg gcggatgagc
       61 ttcaactcgg ctttgagccg cattcgggta gtaagcgtgc gatcggtata tcgcgtcaat
      121 tcgcatttat tgatcaactc atcagcctcg tcttccggta agaaggcgag cagggtcttg
      181 ccgacggagg tgcaatgcag gggtgtgcgc tggcctacgg ttgacggtgt tctcaatgtg
      241 tgtgggcttt ccacgttgat gatcgaaagc atgcgatctc cattcagaat gcagatgtgc
      301 gccgtctcgc cggtttccga cacgacgctc tcaaggtagg gctttgcgcg ttcgcgcagg
      361 tcaagatgcg ccaccgcctg acttcccagt tcaaagagtt tcatacccag gcgatacttt
      421 ccattcagag gccctctttc gatcaatcga tgtcgctcta agaccatcaa cagccgatgc
      481 accgtgcttt tgtgcagatc gagcttctca gacagttcag cgggtcccag ctcgggacct
      541 tccttcgaca gcgagtccag gatgcctaac gcccgatcga gcacctggac ctgataaggg
      601 gaatcgttga gatcggcgac cggctttatt ttcactgtcg atgccatggc tactccccgg
      661 cgactatttg tgggattaaa tccaaggttt cattatataa gacgatatac tgtatagcga
      721 aacccttcat ttatgtcaat atccgatcat gagcgttctc gcgaagtgat ccagaataaa
      781 gcgaggccca gcaacccgac tgcgccggca acttgaagcg gcacatgcgg atcgtaagtc
      841 cacagaatcc cgccgattgc cccggctgga acgatcaaca gattgcggat tgtgtaatag
      901 atgccaaccg cgcgagcgcg ctcgggtggg tctgccagat cgacgatgaa cgccttgcgc
      961 gccggctcac ccatttcctt cagcccgccg atgacaaaag cgacgacgag cgccgtgaag
     1021 ctatctgccc attgcacggc cagcggaaaa agcgcgaagc agagaaaggt cattgcgatt
     1081 atcggccgcc gtccggccag gtctgccagt ttccccgacg gcaaatacat catcagagaa
     1141 acggcctgtt gcaacgcgta aagcataccg aaagccggag ccgaatgccc cagcacgttc
     1201 gtcacataca gcacgatgaa cgcggcggcg acggcttcgc cgaaacgcac cagacattcc
     1261 gcgacgagca gtcgtttcag ggccggtggc attcgggcaa ggatcgccag tgcgggcgca
     1321 ttttcaaaat gcctttctgc gatagtctgc tcaaggtagc cgtgccgctg cgtgatgagg
     1381 acgaggagtg ccagcaggag tgtgattccc gccgcgatgc gcacaccggt tatagcgccg
     1441 aaggaggcga tcagcagtcc gccgagcggc gcgccgatca cgcgcggcag acgcaccagc
     1501 acggactgca cgctgaaggc taacacccgc cgcccctgtg gcaatgcatc tccgatcact
     1561 gcaaaggtga cgggaaaggc tccggacttc cacgccatta ccaaccagag gcc
//
LOCUS       DATDHO010000686         2468 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_330083, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000686 DATDHO010000000
VERSION     DATDHO010000686.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330083"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..679)
                     /locus_tag="VIY07_13260"
     CDS             complement(<1..679)
                     /locus_tag="VIY07_13260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382760.1"
                     /translation="MTRLSPTALAPIPVVDIRGDGPLRHATEGRARARALRDECINWL
                     PRVAAGLLPAMDFLTRRWLMRSRSPYAAEIRGIAAALGFPGIWFLNGCYQWGCTALAR
                     EQGDAPWLARTLDWPFPGLGRHVEVARMRGIAGDFDNVTWPGYVGVLTASAPGRFAAC
                     INQAPMRRRTGQPWLRPYDIALNAVQTWGTSAIPPDHLLRDVFETCATYAEAKHRLQT
                     TMIARPAI"
     gene            1142..2080
                     /locus_tag="VIY07_13265"
     CDS             1142..2080
                     /locus_tag="VIY07_13265"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY6382761.1"
                     /translation="MRPRKLAFRYALVVTAVWLIAGGTYTAFRDNGLGRLIGEQTALQ
                     LTYEDRIAELRAQVDRIMSQKLLDQAQVEQRVNSLLQRQARMSLSLGDLEQKQVAALS
                     DLGERIDKRAHQMQTVLADLGVKVARPPAEAATGGPFVPIKPLQPEASSFESQLYRIN
                     AGRAQMDLYNRALAAVPVRTPVAGKTDTTSPFGIRMHPILKRIAMHTGIDLRGDLGEP
                     VRATATGKVTVAGRQRGYGNVVEISHGNGLTTRFGHLSEISVKVGQVVRIGEIVGKIG
                     STGLSTSPHLHYETRINGGAVDPQKFLRAGLTLDDN"
     gene            complement(2248..2463)
                     /locus_tag="VIY07_13270"
     CDS             complement(2248..2463)
                     /locus_tag="VIY07_13270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEY6382762.1"
                     /translation="MKSSIVKRSIVIHGHKTSVSLEDAFWNGLKDIAHAECVTLSKMV
                     AEIDKRRRLGNLSSALRLFVLDWTRAH"
BASE COUNT          532 a          745 c          709 g          482 t
ORIGIN      
        1 agatagcggg acgcgcgatc atcgtcgtct gcagacgatg cttcgcttcc gcataggtgg
       61 cgcacgtctc gaacacgtcg cgtagcagat ggtcaggcgg tatggcgcta gtgccccacg
      121 tctgaacggc gttcaaggca atgtcatagg gccgcagcca gggctggccg gtgcgccgcc
      181 gcatcggcgc ctgattgatg caggcggcga agcggcccgg agccgaagct gtcaggaccc
      241 cgacatatcc cggccatgtc acattgtcga aatcgccggc gataccccgc atccgtgcaa
      301 cttcgacatg acgtccaagt cccggaaaag gccaatcgag cgtgcgtgca agccagggtg
      361 catcgccctg ctcgcgcgcg agcgccgtac agccccactg atagcagccg ttgagaaacc
      421 aaatgccagg aaaaccgagc gcggccgcga tgccgcgaat ttccgccgcg tacggcgatc
      481 gcgatcgcat gagccaacga cgggtcagga aatccatagc cggcaacaag ccggccgcga
      541 cacgtggcaa ccagttaatg cattcgtcac gcagggcgcg tgcacgagcg cgcccttcgg
      601 tcgcgtggcg aagcggccca tcgccacgga tatcgacaac cggaattgga gcaagggccg
      661 tcggcgaaag tctcgtcatg taaggttttc gtctctcacg cacacgttga ccgcaaacac
      721 tagcacgggt ggcgaatcat taaccagttg tttactatcg acgtggcggt catcgtcgtt
      781 ctgactcgtg cctcgcagca attttttttg gtcatgtgca atactaccgc cattctcgca
      841 ttcgactcat gcattggtta gcccgacgat gacgcgtccc agtcgagtcc ccactcacac
      901 gaatgtgccg tacggcagcc cccttgcggc acttcctcgc gtcatcgtca ccatccttct
      961 ctaaggacgg atcgagagcg ggcttaatca tttgttaacc atttctggct gacatgccat
     1021 gcggggggca accacggggg cgtcaatgtc gccttcatct gctccagtat tagcacgtca
     1081 tcgaatacgc cgtgcgcgac gccgatcgcg cgcgcgtaac gtaccgccta agcacgctac
     1141 tgtgcgcccg cgcaaactgg ctttcagata cgcgctggtg gttacggcag tttggttgat
     1201 tgctggcggc acgtataccg cgttccgcga taacggcctc ggccggctga ttggcgagca
     1261 gacagcgctg caactcacct acgaagaccg tatcgctgaa ttgcgcgcac aggtcgaccg
     1321 aataatgagc caaaagctgc tcgatcaggc acaggtcgag cagcgggtca attcgctgct
     1381 gcagcggcaa gcgcgtatgt ccctttcgct cggcgacctc gaacaaaagc aggttgcggc
     1441 cctgagcgac ctcggcgagc gcatcgacaa gcgagcgcac caaatgcaga ccgtgcttgc
     1501 cgatcttggt gttaaggtcg cgcgcccacc agccgaagct gcaaccggcg ggccatttgt
     1561 tcccatcaag ccactgcagc cggaagcgag ttctttcgaa agtcagctct atcgcatcaa
     1621 tgcgggaaga gcgcagatgg acctttacaa ccgggcactc gccgccgtcc ctgtacgcac
     1681 accggtcgcc ggcaaaacag atacgacctc gccgttcggc atccgaatgc atccgatctt
     1741 aaagcgtatc gcgatgcata ccgggatcga tctgcgaggc gaccttggcg agccggtgcg
     1801 agcaacagcc actggcaagg tgaccgtcgc gggccgacaa cgtggctacg gaaatgtggt
     1861 cgagatcagt cacggcaacg gtctcaccac tcgcttcggc catttgtccg aaatcagcgt
     1921 gaaagtcgga caggtcgttc gtattggcga aattgttggc aagatcggat cgaccggcct
     1981 ctcgaccagt ccgcacctgc actacgagac acggattaat ggcggtgcag tcgatccgca
     2041 gaaatttttg cgtgcgggcc ttactctgga cgacaactga acgtcgcgtg tcgaaactgg
     2101 cgcgatcgtt tgcagttaac tgtgcaagcg caccaaccgg atatcgatcc tgagggatgt
     2161 gattgagggc cggagcataa cgcatcccac cttctcaatt aaggcgtgag gcatcacaac
     2221 ctaacccgta ccgaatgacc agcctgttca atgcgcgcgg gtccaatcta gcacaaacag
     2281 gcgaagcgct gaggagaggt tgcctagtcg gcgccttttg tcaatctctg caaccatctt
     2341 tgacagcgtt acacactcgg catgtgcgat gtccttcagg ccgttccaga atgcatcttc
     2401 gaggctcaca cttgttttgt gtccgtgaat aacaatggaa cgtttgacga ttgaggattt
     2461 catgagcg
//
LOCUS       DATDHO010000687         7834 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_31885, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000687 DATDHO010000000
VERSION     DATDHO010000687.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7834)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7834)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7834
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_31885"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..847)
                     /gene="sseA"
                     /locus_tag="VIY07_13275"
     CDS             complement(<1..847)
                     /gene="sseA"
                     /locus_tag="VIY07_13275"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018115454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004792 - thiosulfate sulfurtransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HEY6382763.1"
                     /translation="MGASTSSRWLKSTEWLAGQLGKNNVAIVDGSYYLPTQKRDARAE
                     YVAAHIPGAVFFDINAIADKSTDLPHMLPGPDQFGEAAGSLGISDKDTIVVYDGSGFY
                     SAPRVWWTFHIFGARNVFILDGGLPAWKAEGRPTEAGEVKRLKRTFNANMDTNAVAMV
                     GDVQMALSSETAQVVDARSAGRFAGSEPEPRTGLRSGHMPGAHSVPATEIVENGRLAS
                     PDKIAAAFRKAGVDTDKPIITTCGSGVTAVILAMGLDAIGKKMPRIYDGSWSEWGARP
                     DLPVAK"
     gene            944..1264
                     /locus_tag="VIY07_13280"
     CDS             944..1264
                     /locus_tag="VIY07_13280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEY6382764.1"
                     /translation="MIVRIWHGWTSPQNADVYEALLRTEIFPGILARSIAGFRRIELL
                     RAPAGEEVEFVTVMWFDSLEAVKAFAGPDYETAVVPPKARAVLSRFDASSRHYEVRER
                     HDAR"
     gene            complement(1261..1974)
                     /locus_tag="VIY07_13285"
     CDS             complement(1261..1974)
                     /locus_tag="VIY07_13285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanyl-tRNA editing protein"
                     /protein_id="HEY6382765.1"
                     /translation="MPTDCLFREDSYLKNCEARVVAMTEGGIVLDRTVFYATSGGQPG
                     DAGELTTENGARIPIETAIYSDTAKSEIAHVPATNAQGLKIGDSVTAAIDWDKRYARM
                     RMHTALHLLSAVLPYAVTGGSVGDSESRLDFDIPEAGLDKDAITAKVAEMIASNAPVT
                     SRWITDAELDANPGLVKTMSVKPPMGTGRVRLIEIAGLDLQPCGGTHVRATGEIGGVR
                     VTQIEKKGKQNRRVRLALT"
     gene            complement(1977..3017)
                     /locus_tag="VIY07_13290"
     CDS             complement(1977..3017)
                     /locus_tag="VIY07_13290"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEY6382766.1"
                     /translation="MQVRNDSIDAIGHTPLIKLKRASEETGCTIFGKAEFMNPGGSVK
                     DRPGRQMILEAESRGELHPGGLVVEATAGNTGIGLALVANARGYRTLIVIPQTQSQEK
                     KDVLRLCGAELVEVPAVPFSNPNNYQHVGRRLAEQLRKTEKNGVIFADQWNNLDNRKA
                     HYVSTGPEIWEDCNGRIDGFICSIGTGGTVAGVSAFLREKNKDVVIGIADPRGAAMYH
                     LFKDGQAKATEGGSITEGIGLGRVTPIIDGLKVDNAYLIPDEEALPVIFDLLEQEGLC
                     LGGSSGINVAGAIRMAKDLGPGKTIVTILADYGTRYQSKLFNPDFLRSKKLPVPEWLE
                     RKSDIKPPFEKT"
     gene            3918..4477
                     /locus_tag="VIY07_13295"
                     /pseudo
     CDS             3918..4477
                     /locus_tag="VIY07_13295"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
     gene            4638..5843
                     /locus_tag="VIY07_13300"
     CDS             4638..5843
                     /locus_tag="VIY07_13300"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382767.1"
                     /translation="MRIFGWLGIAAMALTVGGAAQAETIKIGVVLPFSGANADLGHQI
                     DKAFDLYVKLHAKDIAPHKVEIVKRDEGPPTGAQAKTVATELITNDKVQILTGFVFSP
                     SAIALAPVVTQAKVPMIIANAGTAWITNLSPYIARLSFSMWHHAYPMGGYAFSKIGCK
                     TAALAYTDFPPGKDSTEAFKTGFEKAGGKVTESIPMGSPVQVPDFTPFFQRIKDAKPD
                     CMYVFIPSGAHATGVAKAYGELGMRKGGVKLIGPMDLIPDNKLQDMGDAAIGTIVMGN
                     YAVDLDNADNKAFNKAWHEAYGKDSYPDFMSAAGWDTMHAIFDAIKKLNGKVTDGQQV
                     IDAMKGWTGNGPRGKVSIDAATRDIVQDEHAMEVIRKPDGKLGIKVLDTTKAVKDECK
                     ELKVGRCGS"
     gene            5926..6798
                     /locus_tag="VIY07_13305"
     CDS             5926..6798
                     /locus_tag="VIY07_13305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382768.1"
                     /translation="MPQIANIAVSILFDGLAYAMFLFITSVGLSVTMGLMGFVNLAHG
                     AFAMAGGYLVVTLTRTLGVGFVPSLIIAAVVVGAVSVFFERFLYRRLYKSTDLEQVLL
                     TIGLAFMAIATATYFYGPIPKSVPLPDWLQGDVNLGFRYFPSYRAFLIVLGAALIAVL
                     WYVFERTNIGAKIRAAVDNRRMAESVGINVDRLFTLTFAVGSGLAALGGGLAIQLLGL
                     SPSFAVIYLVLFLIVVAVGGLGSLKGTLLAALVLGVFDTGGKYLLADAGGFFVYAVTV
                     AVLLVKPAGFYGRE"
     gene            6785..7813
                     /locus_tag="VIY07_13310"
     CDS             6785..7813
                     /locus_tag="VIY07_13310"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382769.1"
                     /translation="MAASDTIPAAGAASTRERAADYLLTRHRFHLAEALPWLIAIAVF
                     FIFPTRMTFGSQVLVMIMFALSLDLILGYAGIVTLGHAAFFGVGAYTVGLAAARLEWT
                     EPISGLFAAAIAAGLVGFITGWFLLRYRGLTLLMLTLATAILLQETGNLRSDISGGYD
                     GLPGLTFKPLLGLFEYDLYGHTYYLYALAVLAIVFYLVRRIVYSPFGQALTGIRENVR
                     RMHAIGSPVHWRLVTVYTIAAAIAGVAGALFTQTNAYVTLTVFDFDNSAKVMVMLILG
                     GTGRLYGAFIGATVYMVLEDYFSKLSPTFWQFGIGLMLVVAVLFAPRGILGVFENVGK
                     YFAERKRT"
BASE COUNT         1398 a         2357 c         2374 g         1705 t
ORIGIN      
        1 ccttggcgac cggaagatcg ggacgcgcgc cccattccga ccacgagccg tcatagatgc
       61 gcggcatctt cttgccgatg gcatcgagtc ccatcgcgag gatgaccgcg gtaacgccgg
      121 agccgcacgt cgtgatgatc ggcttgtcgg tatcgacgcc tgccttcctg aacgcggccg
      181 caatcttatc gggcgaggcc agccgtccgt tctccacgat ttccgtcgcg ggcacgctgt
      241 gggcgcctgg catgtgaccg gagcgcaggc cagtccgcgg ctccggctcg ctgccggcaa
      301 agcggccggc cgatcgggcg tcgaccacct gggcagtctc gctgctgagc gccatctgca
      361 cgtcgcccac catggcgacg gcgttggtgt ccatattggc gttgaacgtc cgtttgagcc
      421 gctttacttc accggcttcc gtcggccggc cttccgcctt ccacgcgggc aaaccgccat
      481 cgaggatgaa cacgttacgc gcgccgaaaa tatgaaaggt ccaccacacc cggggcgcgg
      541 aataaaaccc gctgccatcg tagaccacga tggtgtcctt gtctgaaatc ccgagcgagc
      601 ctgccgcttc gccgaattgg tccggtcccg gcaacatgtg gggcaggtcg gtcgacttat
      661 ctgcgatggc attgatgtcg aaaaacaccg cgccgggaat atgcgccgcg acatattccg
      721 cacgggcatc ccgcttttgc gtgggcaaat aataagaacc gtcgacaatg gcgacgttat
      781 tcttgccaag ctggcccgcg agccattcgg tcgatttcag ccagcggctc gacgttgatg
      841 cacccattgc aaactccgta taacgcaagc ttggtcgatc ttgcgtccga gtgcaacgat
      901 tgaggccgcc attaggttgc atgccgcacg atggggatga tgaatgatag tgcgaatttg
      961 gcatggctgg accagcccgc aaaacgccga tgtctatgag gccttgctca ggaccgagat
     1021 ttttcccggc attttggcgc gcagtatcgc cggcttccga cgcatcgagc tcttgcgcgc
     1081 gccggccggc gaagaggtcg agttcgtgac cgtgatgtgg ttcgactcgc tcgaggccgt
     1141 gaaggctttt gccggtccgg attacgaaac ggcagtggtt cctccgaaag cacgcgcggt
     1201 gctcagtcgt ttcgatgcaa gctcgcggca ctacgaagtg cgcgaacggc acgatgcgcg
     1261 ctaggtgaga gcaaggcgca cgcggcgatt ctgcttaccc ttcttttcga tctgtgtgac
     1321 gcgaactccg ccgatttctc ctgtcgcgcg cacgtgcgtg cccccgcacg gttgcaggtc
     1381 aagacccgcg atctcgatca gtcgcacgcg gccggtcccc atcggtggct tcaccgacat
     1441 ggttttgaca aggcccgggt tggcatcgag ctcggcatcg gtgatccagc ggctggtgac
     1501 cggcgcattg ctcgcgatca tctcggcaac ttttgcggtg atcgcatcct tgtcgaggcc
     1561 ggcttccgga atgtcgaagt cgagacggct ttcgctgtct ccgactgaac cgccggtcac
     1621 tgcatagggc agcaccgcgg aaagcaggtg cagcgctgtg tgcatgcgca tgcgcgcata
     1681 gcgcttgtcc cagtcgatgg ccgcagtaac gctatcgcct atcttgagac cctgtgcatt
     1741 ggtcgccggc acatgggcaa tctcgctctt cgcggtgtcg ctgtagatcg cggtctcaat
     1801 cggaatgcgc gcgccatttt ccgtcgtgag ctcaccagcg tcgccgggct gtccgccgga
     1861 cgttgcatag aagactgtgc ggtcaagcac gatgccgccc tcggtcatcg cgacgacgcg
     1921 ggcttcgcag ttcttgagat atgagtcctc acgaaacagg cagtccgtcg gcatggtcag
     1981 gtcttttcga acggcggttt gatatcagat ttgcgctcaa gccattccgg caccggcaat
     2041 ttcttggaac gcagaaagtc gggattgaac agcttcgact gatagcgggt gccataatcg
     2101 gcaagaatgg taacgatcgt cttgcccggg ccaagatcct tggccatccg gatggccccg
     2161 gcgacattga tgccggaaga gccgccgagg cagagcccct cttgctcgag cagatcgaaa
     2221 atgacgggca gcgcctcctc atcgggaatg agataggcgt tgtcgacctt taatccatcg
     2281 atgatcggcg tcacgcgccc gagcccgatg ccttcggtta tcgaaccgcc ttccgtcgct
     2341 tttgcctgtc catccttgaa caaatgatac atcgccgcgc cgcgcggatc ggcgatgccg
     2401 atgacgacgt ccttattttt ttcgcggaga aaagccgaaa ctccggccac agtgccgccg
     2461 gtaccgatcg agcagataaa gccgtcgata cggccgttgc agtcttccca gatctccggg
     2521 cccgttgaaa cgtagtgtgc cttgcggttg tccaggttgt tccattgatc ggcgaagatc
     2581 acgccgttct tctctgtctt cctcagttgc tcggcaaggc gccggccaac atgctggtaa
     2641 ttgttcggat tggaaaaggg aacggcaggg acctcgacca actcggcgcc gcacaggcgg
     2701 agcacgtctt tcttttcctg gctctgcgtc tgcgggataa caatgagcgt gcggtaaccg
     2761 cgcgcattgg cgacaagagc aaggccgatg ccggtgttgc cggcggtcgc ttccaccacc
     2821 agtccgccgg ggtgaagttc gcctcgactt tctgcctcaa ggatcatttg ccggcccgga
     2881 cggtccttga cggagccgcc cgggttcatg aattcggcct tgccgaagat cgtgcatccc
     2941 gtttcttcgg aagcacgctt gagcttgatt aaaggcgtgt ggccgattgc gtcgatactg
     3001 tcgttacgga cttgcatgcc cggttccggg actggtgagg gtattcgaac ctagtggagc
     3061 ctcgatagcc ccacaagacc ggctacgacg gcggttcagg acaattgcag cggctttgga
     3121 aatatcttcg caaccatacc ggcgcaatag cggcggcgga ataaggatat tcatcagttc
     3181 ttttcccgcc acgggctatg tggcgacggg ggactaaatc aaaaaaccgg ccccgcaaga
     3241 ctgctgatca agccatgacg ttcgacgtcc acaccctgtt tctggtgaca atttatgtcg
     3301 aggcgatcct cggcttgctg cttcttttcg tgtgggcgca gaacatggcg ctgcgcgccg
     3361 tctgctggtg gggtttcgcc cacatggtgc ggcttgtctc gataggcctg ttttcaatgt
     3421 atggggcagt gcccaatctg atcagcatcg atctcgccaa tgcattgctc ttcaccgcct
     3481 tcgccgtcac ctggacgggc gcgcgcgtct tcgacgggcg cccggtcgag ccggtctatc
     3541 tggtgacggg cgctgtagtc tggctcctga tctgccgcct tccgatattg gcagaagacg
     3601 tcaacctgcg ggcgctcatc gcctccggaa tcatcaccgg ttatacgtgg ctgacagctt
     3661 acgagttctg gcgcggccgc gacgaaccgc tcgtgtctcg ctggccggca atcatccttc
     3721 tgttcacgca tggagcatta tttctgttgc gcactccaat ggtggcgctg ttgccgagcc
     3781 tggtcagcga cagcctgttc agcagcgtgt ggatgacggt gctgagcttc gaggccctgc
     3841 tcctcaccat ctcggacgcg ttcatcctgc ttgcgatggc gaaggagcgt accgaattgc
     3901 gtcaccgcac ggctgcgatg gtggatccgc tcaccggcgt cgccaaccgc cgctcgttcc
     3961 tgcaggatgc agcgctgatc gccaaacggc atatcggcaa tccgcggccg accgcggtgc
     4021 tgctgatcga ccttgatcat ttcaagtcga tcaacgatcg ttttggccat gcggtcggcg
     4081 acagctcgcc attttcgcag aggccgcacg caagtcgatg cgggggtcgg atctgatcgg
     4141 ccgcatgggc ggtgaggagt tcgctgcaat tttggttgag accagccgcg acaaggcatc
     4201 ggaagtagcc gaacggatcc gcgccagctt tgcgcacatg gcgcaggagg tcgacggtca
     4261 tcgcgttgag gcgaccgtga gcatcgggct cgtgcactgc ctggaacgga cacttgatat
     4321 tgccgacctg ctgactcagg ccgaccacgc cctctattac gccaaggagc gcggccgcaa
     4381 tcgcattgag acagcggcga atcccgtgcg cggcgggcag gaaggggtgc cttcgccaag
     4441 atccgcggcc gcgatcgccg cgaaaactgc cgcctgatcc aaacaacgct gaatggaata
     4501 ctgcgcgcgg ggccgtgacg cgctgccgcg ccgatgccaa ttgaccaatg gcttcgactt
     4561 agtccagttt aggacaagtg ggcggcattg ccgtttggtg gcattccaaa ccaattcaaa
     4621 gacgtaggga ggaagacatg cgcatatttg gctggcttgg gatagccgcc atggctttga
     4681 cggtgggcgg cgcggcccag gccgaaacga tcaagatcgg ggtagttctt ccgttcagcg
     4741 gagccaatgc cgacctcggc catcagatcg acaaggcctt cgacctgtac gtgaagctcc
     4801 atgccaagga catcgcgccg cacaaggtcg agatcgtcaa gcgcgatgaa ggcccgccga
     4861 ccggcgcgca ggcgaaaacc gttgcgaccg agctgatcac gaacgacaag gtgcagatcc
     4921 tgaccggctt cgtcttctcg ccttcggcca tcgcgctggc gcccgtggta acgcaggcga
     4981 aggtgccgat gattatcgcc aatgccggta cggcctggat cacgaatctg tcgccctata
     5041 tcgcgcggct ctcgttcagt atgtggcacc acgcttatcc gatggggggc tatgccttca
     5101 gcaagatcgg ttgcaagacc gcggcgctgg cctataccga cttcccgccc ggcaaggatt
     5161 ccactgaagc cttcaagacc ggtttcgaaa aggccggcgg aaaggtcacc gagtctattc
     5221 cgatgggcag cccggtgcag gtgccggatt tcacgccgtt cttccagcgc atcaaggacg
     5281 ccaagcccga ctgcatgtat gtgttcattc cgtccggcgc gcacgcgact ggcgtggcaa
     5341 aggcctatgg cgaactcggc atgcgcaagg gcggcgtcaa gctgatcggg ccgatggacc
     5401 tgatcccgga caacaaactg caggacatgg gcgacgccgc catcggcacc atcgtgatgg
     5461 ggaactacgc ggtcgacctc gacaatgccg acaacaaggc gttcaacaag gcctggcacg
     5521 aggcatacgg gaaagattct taccccgact tcatgtctgc ggccggctgg gacaccatgc
     5581 acgccatctt cgatgcgatc aaaaagctca atggcaaagt aaccgacggc cagcaggtca
     5641 tcgatgcgat gaaaggttgg accggcaatg gtccgcgcgg caaagtgtcg atcgacgccg
     5701 cgacccgcga catcgtgcaa gatgagcacg ccatggaagt cattcgcaag cccgacggca
     5761 aacttggtat caaggttctc gacaccacca aggcggtgaa ggacgaatgc aaggagctca
     5821 aggtcggccg ttgcggctcg tgatctttcg cggcttaatt gacacctgac tgcgccgccg
     5881 cgcataaagg cgcggcggcg ttttcgttaa tccgaggtgg ggctcgtgcc gcagatcgcc
     5941 aatattgctg tcagcattct cttcgacggc ttggcctacg ccatgttcct gttcatcacc
     6001 tctgtcggcc tttcggtcac gatggggttg atgggcttcg tcaatcttgc gcacggcgct
     6061 tttgccatgg ctggcggcta tctcgtggtc acgctcacgc gcacgctcgg ggttggcttt
     6121 gtgccttccc tgattattgc cgctgtagtc gtcggcgcgg tgagcgtatt tttcgagcga
     6181 tttctctatc gccgactcta caagtccacc gatctcgagc aggtcctgct gacgattggt
     6241 cttgccttca tggcgattgc gaccgcgaca tatttttatg gtcctattcc gaagtcggtg
     6301 ccactgccgg actggctgca aggcgacgtc aatctcggct tccgctattt ccccagctac
     6361 cgtgcttttc tgatcgttct cggcgcggcg ctgatcgccg ttctctggta tgtcttcgag
     6421 cgcacgaata tcggcgccaa gatccgtgcc gcagtcgata accggcgcat ggcggaatcg
     6481 gtcggcatca atgtcgaccg cctgtttacg ctgacctttg cggtgggatc cgggcttgcc
     6541 gcgctcggtg gcggccttgc catccagctg ttgggcctgt cgccgagttt tgccgtgatc
     6601 tacctggtgc tgttcctgat cgtcgtggcg gtcggcggtc ttggcagcct gaagggtacg
     6661 ttgctcgccg ccctcgtcct cggcgttttc gatacaggag gtaaatatct gctggccgat
     6721 gccggtggat tttttgtcta cgcggtgacg gtggctgtcc ttctcgtcaa gccggcggga
     6781 ttctatggcc gcgagtgaca ccatccccgc tgccggcgcc gccagcacgc gcgaacgcgc
     6841 ggcggattat cttctgacac ggcatcgttt ccatctcgcc gaggcgctgc cctggctgat
     6901 cgccattgcc gtctttttca ttttcccgac ccgcatgacc ttcggcagcc aggtgctggt
     6961 gatgatcatg tttgcgctct cactagacct gatcctcggt tatgccggca tcgtgacgct
     7021 gggccatgct gctttcttcg gggtcggcgc ctatacggtc ggacttgccg cggcgcgctt
     7081 ggaatggacc gagccgatca gcgggctctt cgccgctgcg attgccgccg gcctcgtcgg
     7141 atttattacc gggtggtttc tgctgcgcta tcgcggtctc acgctgctga tgctcacgct
     7201 cgcgaccgcc atcctgctgc aggagaccgg caatctgcgg tcggatattt ccggcggcta
     7261 tgacggcttg cctgggctga ccttcaagcc gctattgggc ctgttcgaat acgatctcta
     7321 cggtcacact tactacctct atgcgctcgc ggtgctcgca attgtgttct atctcgtacg
     7381 gaggattgtc tattcgccgt ttggtcaggc gctcaccggc attcgcgaaa acgtgcggcg
     7441 catgcatgcg atcggatctc ccgttcattg gcggctggtg accgtctata cgatcgccgc
     7501 cgcaatcgcc ggcgttgcag gcgcgctttt cacccagacc aatgcgtatg tcacgttgac
     7561 ggttttcgac ttcgataact ccgcaaaggt gatggtgatg ctgatcctcg gcggaaccgg
     7621 gcggctttac ggtgcattca tcggcgcgac cgtttacatg gtgctggagg attacttctc
     7681 aaaacttagt ccgaccttct ggcaattcgg catcggcctg atgctggtag tggcagtgct
     7741 ttttgcgccg cgcgggattc tgggcgtgtt cgagaacgtc ggtaaatact ttgccgaaag
     7801 gaaacggacg tgactgctgc attgcaggtc gaag
//
LOCUS       DATDHO010000688         5885 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_281043, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000688 DATDHO010000000
VERSION     DATDHO010000688.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5885)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5885)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5885
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281043"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(177..722)
                     /locus_tag="VIY07_13315"
     CDS             complement(177..722)
                     /locus_tag="VIY07_13315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome C chaperone family protein"
                     /protein_id="HEY6382770.1"
                     /translation="MIFPLFRRSSRQDTISALYGTIVAQARLPCFYREYGVPDTVNGR
                     FDLLVLHLAIVLDRLAEGSELRAMGQALFDRFCEDMDDNLREIGIGDLSVPREMQRIG
                     EAFYGRAQAYRSALASEGDEALVAALARNIYGGAVPEQAAPLRLAAYIREAVRGLAAQ
                     RPADLLRGKLRMADPRRQCSC"
     gene            787..1251
                     /gene="bamE"
                     /locus_tag="VIY07_13320"
     CDS             787..1251
                     /gene="bamE"
                     /locus_tag="VIY07_13320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEY6382771.1"
                     /translation="MKLSGSGSKTTSLGYRLALALAGAFFLAACGFTQETLQRGYVLP
                     EGALEQVPVGATQEQVLIVLGTPSTVATVSGDAFYYISQKAQRSAAFMPYEVSDQRVI
                     AVYFDKDRRVTRLANYGLKDGKIFDFASQTTPTSGQELSYLRNIFKNVGFRL"
     gene            complement(1316..3436)
                     /locus_tag="VIY07_13325"
     CDS             complement(1316..3436)
                     /locus_tag="VIY07_13325"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HEY6382772.1"
                     /translation="MNTLWMIVGCGVLAIAYGIWATQSVMSADPGSKKMQEISEAVRE
                     GAQAYLRRQYATIGVVGIVVFLIIGFTLGWLVAVGFAIGAVLSGATGFIGMNVSVRAN
                     VRVAQAATTSLAGGLGLAFKAGAITGMLVAGLALLGVTLYFGFLTGTLHKAPNDRTVI
                     DAMVALGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVG
                     DNVGDCAGMAADLFETYAVTIVATMVLASIFFANTPMLMPMMIYPLAIGGACIITSII
                     GTFFVRLGKKESIMGALYRGFIASAVLSLIAIWFVTDYLIGMGPIAGASFTGKALYVC
                     AVIGLVVTGLIIWITEYYTGTNFRPVRSIASASVTGHGTNIIQGLAVSLEATALPALV
                     IIAGILVSYAQAGLFGIAIAVTSMLALAGMVVALDAFGPVTDNAGGIAEMAGLPKAVR
                     KSTDALDAVGNTTKAITKGYAIGSAGLGALVLFAAYNQDLRYFISTGSQHPYFQGIQL
                     DFSLNSPYVVVGLLFGGLLPYLFGALGMTAVGRAAGAIVEEVRRQFRAKPGIMKGKDK
                     PDYGRAVDMLTKAAIKEMIVPSLLPVLSPIVCYFAIYFIAGGGPAGKSAAFSAVGAML
                     LGVIVTGLFVAISMTSGGGAWDNAKKYIEDGHYGGKGSDAHKAAVTGDTVGDPYKDTA
                     GPAVNPMIKITNIVALLLLAVLAR"
     gene            complement(3816..4769)
                     /locus_tag="VIY07_13330"
     CDS             complement(3816..4769)
                     /locus_tag="VIY07_13330"
                     /inference="COORDINATES: protein motif:HMM:TIGR02001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TorF family putative porin"
                     /protein_id="HEY6382773.1"
                     /translation="MGSAELHRIRTSAVTSVAALWLGCCGGHSACAQVSPETEETGGA
                     ISLGGRGWSDSQGKAPTSDRAPNQLEFDFRGGLATDYIYRGTTLSDYKPAVGAAIEAA
                     FAQLYAGVAVASVKLPTQPAAEITMSGGVRQTIGSIDFDLGATYFLYPGEMTGGGIRG
                     IDYWEAAVRADKKISESIRMAGGFAYSPNVSNTGAWGWYAAAGLGYIVPGNLLPIDVG
                     VSFSGAAGYSWFGAQSPDLGGFPLPAYLNWQAGVTFTRKHFNLDLRYYDTNLSKENCF
                     VFTGDPNARPGGSVNPVTNPEGLVSNWCSATFVAKLWFALK"
     gene            complement(4827..5426)
                     /locus_tag="VIY07_13335"
     CDS             complement(4827..5426)
                     /locus_tag="VIY07_13335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HEY6382774.1"
                     /translation="MSTTHIQPTPTSPLAGVALLRAMADKWWLVLLRGIAAIVFGILA
                     FVWPVITLLTLTLLWGAFAVVDGIFALWGAISGPGGQTGSRVWLAIVGIAGILAGLLA
                     FAWPGLTALVLLVFIAVWAIIIGVMQIWGAIQLRKEIEGEWLLILSGLLSVAFGVLLL
                     VQPGAGALAVVWIIGWYAILAGCIYIALAFRLKKLKHPA"
     gene            complement(5668..>5885)
                     /locus_tag="VIY07_13340"
     CDS             complement(5668..>5885)
                     /locus_tag="VIY07_13340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6382775.1"
                     /translation="VTQCHRPYERNKVQAFNDFLIFGSMALSSFSSGQLLEKFGWTAI
                     NEVILPTIFVTGAMLLWLALRPRRATI"
BASE COUNT         1261 a         1796 c         1767 g         1061 t
ORIGIN      
        1 agctgactta gctcgcgcaa tcccgcaagc ccagtgagct gggcacggac ggtatcgggt
       61 gcatcaatct cgagatgcag gcccgtatcc gggatttcat cgatggccac cggcacgctc
      121 cacggggctt ggtttttctg catgggtttc agtcttctgc cgagcaactc tagctttcaa
      181 caggaacatt gacgtcttgg gtccgccatt cgcagcttac cccgcaaaag gtcggccggt
      241 cgctgggccg cgagaccccg tacagcttcc cgaatatagg ctgcaaggcg caggggcgca
      301 gcctgctcgg ggaccgcgcc gccgtagata ttcctggcca aggccgcgac taatgcctcg
      361 tccccctccg atgccagcgc gctgcggtag gcctgcgcgc gcccataaaa agcttcgcca
      421 atgcgctgca tttcccttgg cactgatagg tcgccgatac cgatttcgcg caaattatcg
      481 tccatgtcct cgcaaaatcg gtcgaaaaga gcctgaccca tggcccgcaa ttcggaaccc
      541 tccgccaaac ggtccaggac gatcgcgagg tgcaaaacta ggaggtcaaa gcgcccattg
      601 accgtgtcgg ggacgccgta ttcgcgataa aaacagggca atcgcgcctg tgccacgatc
      661 gtgccataca gggccgaaat ggtgtcctgc cgcgagctgc ggcgaaacag gggaaagatc
      721 atcgggtctg ttcggggtga cagcggctgc cgcgtacgtc aacgtccctt ttgatgcaag
      781 tctgaaatga agctgtcggg ttcgggttca aaaacaactt ctctagggta ccgtctcgcg
      841 ttggcgttgg cgggagcatt ctttcttgcg gcctgcggct tcacccagga aacgttgcag
      901 cgcggctacg tgctgccgga gggtgcgctg gagcaggttc ccgtcggcgc cacccaggag
      961 caagtgctga tcgtgctcgg cacgccctcg accgtcgcca cggtcagtgg cgatgccttc
     1021 tattacatct cgcaaaaggc ccagcgttcg gccgctttca tgccgtatga agtgtccgat
     1081 cagcgcgtga tcgcggtcta cttcgacaag gaccggcgtg tcacgcggct cgcaaattac
     1141 gggctgaagg atggaaagat cttcgacttc gcgtcgcaaa ctacgcccac tagcggccag
     1201 gagttgagct acctgcgcaa catattcaag aacgtcggct tccgcctgta gtcgccgtgc
     1261 aaataaaaaa gtggcccgcg actgccacgg gccacttgca ttttcattcg ctcgatcaac
     1321 gcgccagcac tgcaagtagc aacagcgcca cgatattggt gatcttgatc atcggattca
     1381 cggcgggtcc cgccgtgtcc ttgtagggat cgccaaccgt gtcgccagtc acggcggcct
     1441 tgtgagcatc cgagcccttg ccgccgtagt ggccgtcctc gatgtatttt ttggcgttat
     1501 cccaggcgcc gccgcccgat gtcatcgaga tggcgacgaa aagccctgtg acgatgacac
     1561 ccagcaacat ggcgccgact gcggagaacg ccgcggattt gccggcaggt ccgccgcccg
     1621 cgatgaagta aatcgcaaag tagcacacga tcggcgacaa gaccggcagc aatgacggca
     1681 cgatcatttc cttgatcgcc gccttcgtga gcatgtcgac ggcgcgcccg tagtccggct
     1741 tgtccttgcc tttcatgatg cccggcttgg cgcgaaattg ccggcgcacc tcctcgacga
     1801 ttgcacccgc ggcgcggcca acggcggtca tcccgagcgc gccgaacagg tacggcagca
     1861 agccaccgaa caggaggccg accaccacgt acgggctgtt gagcgagaaa tcgagctgaa
     1921 tgccctggaa atacggatgc tgggagcctg tactgatgaa gtagcgcaga tcttggttgt
     1981 acgcggcgaa cagcaccagc gcgccgagac cggcagagcc gatggcgtag cccttggtaa
     2041 tcgcctttgt ggtgttgccc actgcgtcga gcgcgtcggt ggatttgcgc acggcttttg
     2101 gcaggcccgc catctcggca atgccgcccg cattgtcggt gaccggccca aacgcatcga
     2161 gcgcaacaac catgccggca agcgccagca tcgaggtgac cgcaatggca atgccgaaca
     2221 gtcccgcttg cgcataagag acgagaatgc cggcaatgat gaccagagcc ggcagcgcag
     2281 tcgcttccag cgacactgcc aggccttgaa tgatgttggt gccgtggccg gtgacggacg
     2341 ccgaagcgat tgaccttacg gggcggaaat tggtgccggt gtagtattcg gtgatccaga
     2401 tgatcaagcc ggttactacc aggcctatga ccgcgcagac atacagcgcc ttgcctgtga
     2461 aggacgcgcc ggcgatcggg cccatgccga tcaggtagtc ggtgacgaac cagatggcga
     2521 tgagcgagag taccgcagag gcgataaagc ccctgtagag ggcgcccatg atcgattctt
     2581 tcttacccag gcgcacgaag aacgtgccga tgatcgacgt gataatgcac gcccccccga
     2641 tggccagggg atagatcatc attggcatca acatcggcgt attggcgaag aaaattgaag
     2701 cgagaaccat ggtggcaacg atggtgaccg cgtaggtctc gaaaaggtcg gcggccatgc
     2761 cggcacagtc gccgacgttg tcaccaacgt tgtctgcgat cgtcgcagga ttgcgcggat
     2821 cgtcttccgg aatgcccgct tcgactttgc cgaccagatc cccgccgacg tccgcgcctt
     2881 tcgtgaagat gccgccgccg agacgagcga agatcgaaat caacgatgcg ccaaaaccca
     2941 gggcaaccat tgcatcgatc acggtgcgat cattcggcgc cttgtgcagc gtgcctgtga
     3001 ggaagccgaa atagagcgta acgcctagca acgcgagacc cgcgacgagc atgccggtta
     3061 tggcaccggc cttgaacgcg agcccaaggc cgccggcgag cgacgttgtg gcggcctgcg
     3121 ccacgcgtac gttagcgcgc accgaaacgt tcatgccgat gaagcccgtg gcgcccgaca
     3181 aaacggcgcc aatggcaaag ccgactgcca ccagccagcc gagcgtgaac ccgatgatca
     3241 ggaaaaccac gatgccgacg acgccgatcg tggcgtattg ccgcctgaga tacgcctgcg
     3301 cgccctcgcg cacggcctcg gagatctcct gcattttctt gctgccggga tcggcgctca
     3361 tcaccgattg ggtcgcccag atcccgtatg cgatcgcgag caccccacag ccgacgatca
     3421 tccatagcgt attcattttg gccattgtcc tcgatttgat tggtgctggc gggacgaacg
     3481 ctcccgccgg cgccaggagc gtcgaggatg gccgcttgta agggcgcttc accccgaccg
     3541 gtaagcgcgc ggatatagcc aaaaagttgt ggactgcgca acgcgtaaat agcgcggcgg
     3601 aacaaggtat tccgtggcag cggtgttttt cgcattactg ttatcgaacg gaccgttgaa
     3661 tatttggcgc gcgggtttca tttatttgcg cgtccttcgt tcaattctga acggcaagct
     3721 gcggtcgcgc cgcctgcggc ggagattcca atcggccact cgggacggag cgaccattat
     3781 ccataggaat aaagtcgaag cagtccgcgg cgaagctact tcaatgcgaa ccaaagtttt
     3841 gcgacgaacg tcgcactgca ccaattcgag accagtccct cgggattggt gacagggttg
     3901 acgctgccgc ccgggcgcgc attgggatcg ccggtaaaga cgaagcagtt ttccttggag
     3961 aggttggtgt cgtagtagcg caggtccagg ttgaagtgct tgcgggtgaa cgtcacgccg
     4021 gcttgccaat tcagataggc aggaagcgga aagccaccga ggtcgggcga ctgagcgccg
     4081 aaccaggaat aaccagcggc gcccgagaat gacacaccga cgtcgatagg aagcaagttg
     4141 ccgggcacga tgtaccccaa cccggcggca gcgtaccaac cccaggcgcc ggtattcgag
     4201 acgtttggtg aatatgcgaa tccgccggcc atacggatcg actcagagat cttcttgtcg
     4261 gcgcggacgg ccgcttccca gtagtctatt cccctgatgc ctccgccggt catttcaccc
     4321 ggatagagga agtacgtcgc gccgagatcg aaatcgatac tgccgatcgt ctgacgaacg
     4381 ccgccgctca tcgtgatttc cgcagccggc tgcgtcggca atttgacgct ggctaccgca
     4441 accccggcgt agagctgcgc gaacgccgct tcgatggcgg caccgactgc cggcttgtaa
     4501 tccgagagtg tagtgccgcg atagatatag tcggttgcga gcccgccgcg gaagtcgaat
     4561 tcaagctggt tcggtgcgcg atctgatgtc ggcgccttgc cttgcgagtc ggaccagccg
     4621 cgtccgccca gactgatcgc acctccggtt tcctccgttt ccggggagac ctgggcacac
     4681 gcagagtgac cgccgcagca accaagccac aacgcggcga ccgaggtcac cgcgcttgtg
     4741 cggatgcgat gtaattcggc cgatcccaag tgccgctccg gctcaaatcc ggaactccac
     4801 ttgcggattg cgcaacgagc gtccggtcaa gcaggatgct tgagtttctt cagacgaaac
     4861 gcaagcgcga tgtaaatgca cccggcgagt atcgcgtacc agccgatgat ccagaccacc
     4921 gccagtgcgc cggcgccggg ctgaaccaac aagaggacac cgaaggcaac cgaaagcagg
     4981 ccactgagga tcagcagcca ttccccctcg atctccttgc gcaactggat cgcgccccag
     5041 atctgcatca cgccaatgat gatcgcccag acggcgatga acaccaagag caccagggct
     5101 gtgaggccgg gccaggcaaa tgccagcagg ccggcgagga ttccggcaat gccgacgatg
     5161 gcgagccata cgcgtgaacc ggtctgaccg ccggggcctg aaatcgctcc ccagagcgcg
     5221 aaaatgccat cgaccaccgc gaaagctccc caaagcagag tcaatgtgag caaggtgatg
     5281 accggccaga cgaaggcgag aataccaaag acaatggcgg caattccgcg cagcagcacg
     5341 agccaccact tgtccgccat cgcgcgcaat aacgcgacgc ctgcgagtgg cgatgttggc
     5401 gtgggttgaa tgtgtgtggt tgacatgccg gttctcctcc ctcagttccg atttgaacgg
     5461 caagacgtct tcgttcaaga attcgcttgt tcgatcggcg ctgaatgaca gtgctcgaaa
     5521 tcgaatccag ccacagcgag ggtactcctg aggagcaagc cgagaaagtt tatcaacgaa
     5581 agttgaagcg ccggaacccg gtacgccaac accgttctca aacggcgggc gcctcaccca
     5641 agcccgcagc cgaacgatgg cgctagtcta tatcgtcgcc cgacgtggcc gcagcgcaag
     5701 ccacaacagc atggcaccgg tcacgaaaat ggtgggcaag atcacctcgt tgatggcggt
     5761 ccagccgaat ttttcgagca actggcccga agaaaacgaa ctcaacgcca tgctgccaaa
     5821 gatcaggaag tcattaaacg cctgaacctt gttgcgctcg tacggccgat ggcactgcgt
     5881 cacca
//
LOCUS       DATDHO010000689         2447 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_379298, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000689 DATDHO010000000
VERSION     DATDHO010000689.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2447)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2447)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2447
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_379298"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(15..224)
                     /gene="yacG"
                     /locus_tag="VIY07_13345"
     CDS             complement(15..224)
                     /gene="yacG"
                     /locus_tag="VIY07_13345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEY6382776.1"
                     /translation="MNEIDHKTLVARACPICGKPVEPAFKPFCSKRCADIDLNRWLSG
                     VYAIPAKDDEDEDGERPAEGEAGEK"
     gene            complement(257..880)
                     /locus_tag="VIY07_13350"
     CDS             complement(257..880)
                     /locus_tag="VIY07_13350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf-like protein"
                     /protein_id="HEY6382777.1"
                     /translation="MIGRPKFVLASGSPRRLALINQAGIEPDALKPADLDETPHRGEI
                     PRAYATRLAQAKATAALANVNLDDELRGAYILAADTVVAVGRRILPKAELLDEAAQCL
                     RLLSGRNHRVYTAICLVTPKESFRQRLVESRVRFKRLSEEDIEAYLASGEWRGKAGGY
                     AAQGIAGTFIVKIVGSYSNVVGLPLYEVMTLLGGEDYPIRFGWLNAV"
     gene            complement(971..1438)
                     /locus_tag="VIY07_13355"
     CDS             complement(971..1438)
                     /locus_tag="VIY07_13355"
                     /EC_number="1.20.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030612 - arsenate reductase (thioredoxin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase ArsC"
                     /protein_id="HEY6382778.1"
                     /translation="MTAPERSSRPHAILFACGMNSVRSPMAAGLLRQMFGTNLYVGSA
                     GVQKGELDPFAVAAMEEIGIDISRHKPITFEELEDLEGLNFDLIVTLSPPAHHKALEL
                     TRKVAADVEYWPMLDPAVAEGNREQRLNAYREVRDQLMARIRERFTQARGTNE"
     gene            complement(1636..2103)
                     /locus_tag="VIY07_13360"
     CDS             complement(1636..2103)
                     /locus_tag="VIY07_13360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0262 family protein"
                     /protein_id="HEY6382779.1"
                     /translation="MKRRLVGVVLDEESIGRSNPDVEHERQVAIYDLLEQNSFVPVGH
                     EEGPYTLHLSINGNRLVFDIRCENGEPVIAHLFSLTPLRRIVKDYYMVCDSYYQAIRT
                     ATPEKIEAIDMGRRAIHNDGSRILMDRLKGKVAVDLDTARRLFTLICVLHWKG"
     gene            complement(2130..>2447)
                     /locus_tag="VIY07_13365"
     CDS             complement(2130..>2447)
                     /locus_tag="VIY07_13365"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEY6382780.1"
                     /translation="EHLEIISADAEQLVRRIRNAGAIFIGAHTPEAIGDYVAGSNHVL
                     PTARSARFSSGLGVLDFMKRTSLLKCGPEQLRALGPAAIALGQAEGLEAHARSVAMRL
                     NQK"
BASE COUNT          473 a          770 c          749 g          455 t
ORIGIN      
        1 agcggtctgc gcgttcattt ctcccccgcc tcgccctcgg ccggccgctc gccgtcttcg
       61 tcctcatcgt ccttcgcagg tatcgcataa acgccggaca gccagcgatt gagatcgatg
      121 tcggcgcagc gcttcgagca gaatggcttg aatgcgggct cgacgggctt gccacagatc
      181 gggcaggccc gcgcgactag ggtcttatgg tcgatctcat tcattactgc gccggcctcc
      241 ggatttgggc ggcgcttcac accgcgttca gccagccgaa gcgaatcgga tagtcctcgc
      301 cgcccagcag cgtcatgact tcgtagagcg gcaagccaac aacattgcta tatgagccca
      361 caatcttcac aatgaaagtg ccggcgatgc cctgcgcggc gtagccaccc gccttgccgc
      421 gccattcacc ggaagcgaga taagcttcga tatcctcctc cgacagtctc ttgaagcgca
      481 cgcgcgattc gacaagccgc tgacggaagc tctctttcgg ggttaccagg cagatcgcgg
      541 tataaacccg gtgattccgg cccgaaagga gccgcaggca ctgcgccgcc tcgtcgagca
      601 gttctgcttt gggcagaata cgccggccaa ctgccaccac cgtgtccgcg gccaggatat
      661 aggcgccgcg cagttcgtca tccagattca cgttcgccaa ggccgccgtt gccttggcct
      721 gggcgagcct tgtcgcgtag gcgcgcggga tctcgccgcg gtggggagtt tcatcgagat
      781 cggcgggctt gagggcatcc ggctcgattc cggcctgatt gatcagggca aggcggcgcg
      841 gcgaaccgga agcgagcaca aatttgggac ggccgatcat ttgacgggat ggcgatgacc
      901 tgaaggaacg cggtgaatgg gcgcggaacc taccggaacg aggcagtttt cacaacccga
      961 accagtgcgt ctactcgttg gtgccgcgcg cctgtgtgaa acgctcgcgg attcgcgcca
     1021 tcaattggtc ccgcacctcg cgataggcat tgagccgctg ctcgcggttg ccttcggcca
     1081 cggccgggtc aagcatcggc caatactcga cgtccgctgc aaccttgcgg gtcaactcca
     1141 gcgccttgtg atgggcaggc ggcgaaagcg tgacgatcag atcgaagttg agcccttcaa
     1201 ggtcctcgag ctcttcgaac gtgattggct tgtgacgcga gatatcgatg ccaatttcct
     1261 ccatagccgc gacagcaaac gggtcgagct cgcctttctg cactccggcc gagccaacat
     1321 aaaggttcgt tccgaacatc tgtcggagca gccccgcagc catcggcgag cgcaccgagt
     1381 tcatcccgca ggcgaataaa atcgcgtggg ggcgcgacga gcgctcgggc gcggtcaatg
     1441 cttgtacccg ctcgtcgccg cgaccaggcc tacgctcgct ttgcgagctt cgcccgattg
     1501 cggtccgctg aaccgcgcag cgcgaaggcg gacgacgggg acccaggacc gggacgcagg
     1561 atgtttcgaa gcgcagctgg attcccgctt acgcgggacc gaacggtttg ggtgtccgcc
     1621 caaacggacc atctctcaac ccttccagtg cagcacgcag atcaaagtga aaaggcgacg
     1681 cgcggtgtca agatcgaccg ccactttccc cttcagccgg tccatcagga tgcgcgagcc
     1741 atcattgtgg atcgcgcgcc ggcccatatc gatcgcctcg atcttctcgg gcgttgccgt
     1801 gcggatcgcc tgatagtagc tgtcgcagac catgtagtag tccttgacga ttcgccgcag
     1861 cggcgtgagc gagaacaggt gagctatgac cggctcgccg ttttcacaac ggatgtcgaa
     1921 gacaagacgg ttgccattga tgctcaggtg aagtgtgtaa ggtccttcct cgtgaccgac
     1981 agggacaaag gaattctgtt cgagcaggtc atagatcgcg acctgccgtt cgtgctcgac
     2041 atccggattg gaacggccga tcgattcctc atcgagaacg acgccgacga gacgccgctt
     2101 catcgcagca ggcggtgctt ttgcagcgct catttctgat taagacgcat cgccacggag
     2161 cgagcgtgcg cctcaaggcc ttccgcctgg ccaagcgcga tggcggccgg gccaagcgcg
     2221 cgcaattgct ccggcccgca cttgagcaat gaggtgcgct tcatgaaatc gagaacgccg
     2281 agaccggatg aaaaacgcgc cgagcgcgcg gtcggcagca cgtgattgga accggcgaca
     2341 taatccccaa tcgcctccgg cgtgtgggca ccaatgaaga tcgcgcccgc attgcggatc
     2401 cggcggacaa gctgctcggc atcggccgat atgatctcca gatgctc
//
LOCUS       DATDHO010000690         1894 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_230421, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000690 DATDHO010000000
VERSION     DATDHO010000690.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1894)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1894)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_230421"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1017
                     /locus_tag="VIY07_13370"
     CDS             <1..1017
                     /locus_tag="VIY07_13370"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HEY6382781.1"
                     /translation="VLREFPITRNAAKIVYETRQAIHRILHGANDRLLVIMGPCSIHD
                     VKAAEEYAGKLKEAKDRLAADLLVVMRVYFEKPRTTVGWKGLINDPKLDGSFHINEGL
                     RIARHLMLELNERGMPAGSEFLDMITPQYLADLVSWGAIGARTTESQVHRELASGLSC
                     PVGFKNGTDGNVRIAVDAIRAAQAPHHFLSVTKDGHSAIVSTIGNEDCHVILRGGKEP
                     NYDAAKVDSAAKVLAEAGIPARIMIDFSHGNSGKDSQRQVEVGREVATQIGEGDERIF
                     GVMVESHLKAGRQDLLPGKALVYGMSITDACIGWDESRPLLDALADAVRRRRLKAEAD
                     AEAE"
     gene            complement(1040..>1894)
                     /locus_tag="VIY07_13375"
     CDS             complement(1040..>1894)
                     /locus_tag="VIY07_13375"
                     /inference="COORDINATES: protein motif:HMM:NF012318.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEY6382782.1"
                     /translation="PMERRGSGSGFVFTPDGFILTNSHVVHRATKLGVTLSDGRSFEA
                     SLIGEDPDTDLAVIRINADGLTPATLGDSKTIRVGQLVVAIGNPYGFQCTVTAGVVSA
                     LGRSLRSQSGRLIDDVIQTDAALNPGNSGGPLVTSHGQVIGVNTAVILPAQGLCFATA
                     INTAKHVAGLLIRNGKIRRGQIGVAGQNVVLHRRQVLLHNLAVAGGVLVVSLEPNSPA
                     QEAGVREGDVIVGYGNHPVAGIDALHKLLTEDQVGTKVELTVLRGGEKKILNVVPQES
                     AGSVHSPR"
BASE COUNT          398 a          560 c          580 g          356 t
ORIGIN      
        1 gtgctgcgcg agtttccgat cacgcgcaac gccgcaaaga tcgtgtatga aacacggcaa
       61 gcgattcacc ggattttgca tggcgccaac gaccgcctgc tagtcattat gggtccgtgt
      121 tcgatccatg acgtgaaagc cgccgaggag tatgccggta aactaaaaga agcgaaggac
      181 cgcttggccg cagatctcct ggtcgttatg cgcgtctatt ttgagaagcc gcgcaccacc
      241 gtgggatgga agggactgat caacgatccc aaactcgacg gcagctttca tatcaacgaa
      301 ggcttgcgaa tcgcgcgtca cctgatgcta gagcttaacg agaggggcat gccggcgggg
      361 tcggagttcc tcgacatgat tacgccgcaa tacctcgccg acctggtttc ttggggagcg
      421 attggcgcgc gcacaaccga gagccaggtt caccgcgagt tggcttccgg tttatcgtgt
      481 ccggtcggat tcaaaaacgg caccgacggc aacgttagga tcgccgtgga cgccattcgc
      541 gcggcgcaag cgccgcatca ttttctgtcg gtgacaaagg acggccattc agcgatcgtg
      601 tcgacaatcg gcaacgagga ttgtcacgtg attttgcgcg gcggcaaaga gccgaactac
      661 gacgcggcga aagtagactc ggccgccaag gtcctggccg aagccggaat cccggcgcgc
      721 atcatgatcg acttcagtca cggcaatagc ggcaaggact cgcaaagaca ggttgaagtg
      781 ggacgtgagg tggcaaccca gatcggcgaa ggcgatgagc gaatttttgg cgtcatggtc
      841 gagagccatc tgaaagccgg caggcaagac ctgctccccg gcaaggcgtt agtttacggc
      901 atgagcatca ccgacgcctg catcggttgg gacgagagcc gccctctgct cgatgcgctg
      961 gcggatgcgg tccgcaggcg acgtcttaag gccgaagcag acgccgaggc ggaatgaagc
     1021 tgcgcgaccg ccggcgcact taccgcggcg aatgtaccga tcctgcggat tcctgaggta
     1081 cgacgttgag aattttcttt tcaccgccgc gcagaacagt caattcaact tttgttccga
     1141 cctggtcttc cgtcagcagc ttgtgaagag cgtcaatacc cgccaccgga tggtttccgt
     1201 aaccgacaat cacatcgcct tccctcacac ccgcctcctg cgccgggctg ttgggttcga
     1261 gggaaaccac caggacgccg cccgcgactg ccaggttatg caaaagtacc tgacggcggt
     1321 ggagcacaac gttttgtccg gcaacgccga tctggccgcg ccggatctta ccgttgcgta
     1381 tgagcagccc ggcgacatgt ttcgccgtat taatcgcggt cgcgaagcat agaccctgag
     1441 ccggcaggat caccgcggtg ttgacgccga taacctgccc gtgcgaggtc acgagcgggc
     1501 cgccggagtt acctggattg agcgccgcgt ccgtttggat gacgtcgtcg atcagccggc
     1561 cggactgcga cctgagcgag cggccgagcg cgctgacgac gccggccgtg acggtgcact
     1621 gaaaaccata agggttaccg atggcaacca ccagttgccc tactcgaatt gttttagagt
     1681 ccccgagggt agcgggcgtt agcccgtcag cgttaatgcg gattaccgcg aggtccgtat
     1741 cgggatcttc tccgatcaaa ctcgcctcga agctacgccc gtccgatagt gtcaccccga
     1801 gcttggtcgc ccgatggacg acgtgactgt tggttaaaat aaagccgtcc ggcgtgaaaa
     1861 cgaagcccga cccgctgccg cgccgctcca tcgg
//
LOCUS       DATDHO010000691         6198 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_429671, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000691 DATDHO010000000
VERSION     DATDHO010000691.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6198
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429671"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1154)
                     /locus_tag="VIY07_13380"
     CDS             complement(<1..1154)
                     /locus_tag="VIY07_13380"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEY6382783.1"
                     /translation="MTPRAIAILNALIGVTLCQAGLVAAETAAVSRALAAQGESPTVA
                     TDVRIGGDDKQTRFVVDLNRKVDLAVFTLADPYRVVVDLPQTTFKFPAKAGEQGRGLV
                     KAFRFGLIMQGGSRIVLDAKGPVRLDKAFVLDAAEGQPARLVLDLVATDRASFMRSLA
                     LGNRPAAQSASVKPSEPPPKPDGDARPLVVLDPGHGGIDNGTRGSGGELEKDVVLAFA
                     QTLREKLESSGKFRVAMTRSEDVFIPLGERVRFARSRSAGLFISLHADALPRREGQAE
                     GATVYTLSENASDAEAARLAETENKADVIAGVDLTSEPDDVANILVDLAQRETKTFSM
                     QFARTIVDELKTAARLHKHPLKSAGFKVLLAPDVPSVLVELGYMSTKDDL"
     gene            1728..4514
                     /locus_tag="VIY07_13385"
     CDS             1728..4514
                     /locus_tag="VIY07_13385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEY6382784.1"
                     /translation="MADKMLIDATHPEETRVVVLRGNRVEEFDFESSNRKQLRGNIYL
                     AKVTRVEPSLQAAFVDYGGNRHGFLAFSEIHPDYYQIPVADRQALIAQEEHDHRAADG
                     DTENSSGPNHHRVKRTAAQRRDSDVVQSEPLAAEEFSADTTEAQPPEFDAGEPPPEHD
                     SERAAQPEESAPPSPEFVADDPAPVAAEITAGEELPARETDAALFETVAEGEQPSAAA
                     EGALTAGTAPPDAANGNGEDHAEEAVESVGGADALEEVQERLPRFRRQYKIQEVIKRR
                     QVLLVQVVKEERGTKGAALTTYLSLAGRYSVLMPNTARGGGISRKITSSEDRARLKEI
                     SQELQVPEGMGVILRTAGASRTKTEVKRDFEYLLRLWETVRDLTLRSTAPKLVYEEGS
                     LTKRSIRDLYGKDIEEIIVSGEEGFREARDFMRMLMPSHVKNVKQYKDTQPLFTRYGI
                     ESQLDAMFSPVVQLRSGGYIVINQAEALVAIDVNSGRATREHHIEDTALKTNCEAAEE
                     IARQLRLRDLAGLIVIDFIDMDEGRNNRTVERRLKEALKHDRARIQVGRISHFGLLEM
                     SRQRIRTSVLESSTEKCPVCGGSGHVRSVSSVSLQLLRAVEEMLIKGATHNLIVRTRA
                     EVALYVLNHKRAHLRALEERFRITITVSADPAVTGQQSYVIDRGEQVHSPEAARNLAA
                     QQPQLVPVAEVEEELVEADGDESAIEEMEGEHRVGSEREGGRRRRRRRGRGGRGRGGE
                     PREVQQFPQETVAEHAVAHEDHDAGSPEEDGFGQSQPRQEGGAFGEGEHREGRRRRRR
                     GRRGGRRNRQRNSGEPTVRSSENGPEPELQHAVEDLDRPPVYESSPPYSPPIEERPAP
                     PPAELTATAPSGTEILRRRSTTREPASFADGAPPPASSPSSATPIVSSTGSDESAATP
                     RRGWWAKRLLGDKG"
     gene            4522..>6198
                     /locus_tag="VIY07_13390"
     CDS             4522..>6198
                     /locus_tag="VIY07_13390"
                     /inference="COORDINATES: protein motif:HMM:NF006192.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aldolase/short-chain dehydrogenase"
                     /protein_id="HEY6382785.1"
                     /translation="MKSAWVDSDATKAVDHWAKTSIGAELAQRIYTTRLLGRDPTLVL
                     HGGGNTSVKTRVKDLVGDDADVLCVKGSGWDMANIEPAGMPAVRLESLRRLRSRAALP
                     DAEMVRAQRAALIDPQAPNPSVETLLHAFLPHKFVDHTHATAILSLIDQVDSEALCQE
                     AFGNRLGFVPYIMPGFALAKKAADVFEKNPAVEGLILDKHGIFTVGSDAREAYERMIE
                     FVTLAEDRLRKKGNAKFVSVRLPDRIASMPDVAPIVRGACALRDAFGEGAHKRQIVDF
                     RTSDTILNYVNGKEVARYARAGLITPDHVIRTGPWPLIVPAPEAGRLDDFKNAVQRAA
                     RTFTDDYSAYFARQKTRAKGAAMRDPLPHVVLVPGVGLMGLGANAKEARIAADVAETA
                     AEGISGAEAIGEFKSISEADMFDVEYWPLELAKLGQRKRLPLEGQVAAITGAGGVIGA
                     ATAKAFADAGAEVALLDIDEKAVQATAKTTGGSTIAVVCDVTSAASVRTAFDHVVAAF
                     GGVDIVVSNAGAAWQGKIGEVDEAVLRESFELNFFAHQKVAQAAVNIMLKQ"
BASE COUNT         1227 a         1902 c         1972 g         1097 t
ORIGIN      
        1 ttgagatcgt ccttggtcga catgtatcca agctcgacca gcaccgacgg cacgtcgggt
       61 gccaaaagca ccttgaagcc cgccgacttg agcggatgtt tgtgcagccg cgccgccgtt
      121 ttgagctcgt caactatcgt acgggcaaat tgcattgaga acgtcttggt ctccctttgc
      181 gcgagatcga ccagaatgtt ggcaacgtcg tcaggctcgg aggtaaggtc cacgccggca
      241 atgacgtcgg ccttgttttc cgtttcggcg agtcgggccg cctcggcgtc cgacgcgttc
      301 tcggaaagcg tgtagacggt tgcgccctcg gcctggcctt cacgacgtgg caaggcgtcg
      361 gcgtgcaacg aaataaagag cccggcgctg cgcgatcgcg caaaccgcac ccgttctcca
      421 agcggaatga aaacgtcttc cgaacgagtc atcgcgacgc gaaacttgcc gctactttcg
      481 agcttctcgc gcaatgtctg tgcgaaggcg agcacgacgt ctttttcgag ttctccgcct
      541 gatccccttg tgccgttgtc gatgccgcca tggccgggat cgagcacgac gagtggacga
      601 gcatctccgt cgggtttcgg cggcggctcg ctcggcttga ccgatgcgct ctgggcggcg
      661 ggacggtttc ccagtgccag ggatcgcatg aagctggcac ggtccgtcgc aacaagatcg
      721 aggaccagtc gcgctggctg gccctctgcc gcgtcgagca cgaaggcttt gtcgagacgc
      781 actggtccct tggcatcgag cacgatacgc gagccgcctt gcatgatcag gccaaaacga
      841 aatgccttca ccagaccgcg gccttgctca ccggctttgg caggaaactt gaaggtcgtc
      901 tggggcagat cgaccaccac ccggtacgga tccgcgagcg tgaagacagc gagatcgacc
      961 tttcgattca agtcgaccac gaagcgcgtc tgcttgtcgt ctccgccgat tcgtacgtcg
     1021 gtggccaccg tgggcgactc accctgcgcc gcgagcgcgc gcgagaccgc ggcggtctcg
     1081 gcagcgacga gacctgcctg acagagtgtt acgccgatca gcgcgttcag tattgcaatc
     1141 gcgcggggtg tcacgaatcc cgaccctttt gagagccttt ttaacctatt aaggcccgtt
     1201 tcggttagcg gaacttgatt gcaggcgtaa tccgtacgcc ggtgtggctc tagtgcaaag
     1261 gctcccttgc cagcaatggc tgagggccgt atgtagagtg cgctgatggt tagagttccg
     1321 gttgtgccgc gttcgggccc cggccgctca ggtcctgtac cgctccccga ggaggtgtgc
     1381 ggacggccaa gcgaaacgag ccgaaaccct tgtgaaggac acccggatca gcgcgcggcc
     1441 gtaggggccg ttcgcgacct agccgtaagc gacgataaac ctcggttcgc gcctgagagg
     1501 cgcgaccgca gtgctacggg tcgcaagttt catgctgcca cggatgcagc aaaggtattt
     1561 ggaagtggaa cgcccacgta ctgccatatt ggcgggtcgt gccggcgtga acttctgcca
     1621 cgcgcccctt cccttcaaca acaatcgtgc cggctttccg ctgtatcgcc ttgcgctgtc
     1681 gtcattgcgc gagcgcgcgg gggtcgctgg ctcagtgaga ttttcaaatg gccgacaaaa
     1741 tgctgatcga cgcgacacat ccggaggaga cccgggtcgt cgtgctacgc ggcaaccgcg
     1801 tcgaagaatt cgatttcgag agctccaacc gcaagcaact ccgcggtaac atctatcttg
     1861 ccaaagtcac gcgcgttgag ccgtcactgc aggcggcttt cgtcgactat ggcggcaatc
     1921 gccacggctt tctggcgttt tccgaaatcc atccggacta ttaccagatc cccgtcgccg
     1981 atcggcaagc gctgatcgcg caggaagaac acgatcatcg cgcagccgac ggggatactg
     2041 aaaacagttc cggaccgaac caccaccggg tcaagcgcac cgccgcgcag cgtcgggatt
     2101 ccgatgttgt gcagagcgag cccctcgctg ctgaggaatt ctcggctgat acgaccgaag
     2161 cgcagccacc ggaattcgac gccggcgaac cgcctcccga acatgacagc gaacgcgccg
     2221 cacaaccgga agagtccgca ccgccctcgc ctgagttcgt tgccgatgac ccggcgcccg
     2281 tagctgcgga aattactgcg ggcgaagagc ttcctgcgcg cgaaactgac gccgcacttt
     2341 tcgagacggt ggccgaaggc gagcagccct ccgctgctgc cgagggcgcg ctgacagccg
     2401 gaaccgcgcc gccggatgcc gcaaacggca acggcgagga ccacgcagaa gaagccgtcg
     2461 aatcggtcgg cggcgctgat gcccttgagg aagttcagga acggcttccg cgcttccgcc
     2521 gccagtacaa gatccaggag gtcatcaaac gccggcaagt gctgctggtt caggtcgtca
     2581 aggaagagcg gggcaccaag ggtgctgcgt tgacaaccta tctgtcgctc gccggacgtt
     2641 attcggtcct gatgccgaac accgcccggg gcggcgggat ttcccgcaag atcacgtctt
     2701 ctgaagaccg ggcacgcctc aaggagatct cccaggaact tcaagtgccg gaaggcatgg
     2761 gtgtgatctt gcgaacggcg ggcgccagcc gaaccaagac cgaagtcaaa cgtgatttcg
     2821 aatacctgct gcggctctgg gaaacggtgc gcgacctgac cctcaggtcg actgcaccga
     2881 agctcgttta tgaggaaggc tcgctgacca agcgttctat ccgcgacctg tatggcaagg
     2941 atatcgagga aatcatcgtc tcgggcgagg aaggcttcag ggaagcgcgc gacttcatgc
     3001 gcatgctgat gccaagccac gtcaagaatg tgaaacagta caaggacacg caaccactgt
     3061 tcacgcggta tggcatcgag agccagctcg atgcgatgtt ttcacccgtg gtgcagcttc
     3121 gatcgggcgg ctacatcgtt atcaatcagg cggaagcgct ggtcgcaata gacgtcaact
     3181 ccggccgtgc cacgcgcgag catcacatcg aggataccgc gctcaagacc aattgcgagg
     3241 ccgcggagga aatcgcgcga caactgcgcc tgcgtgacct tgccggtctt atcgtcatcg
     3301 acttcatcga catggatgaa ggccgcaaca accgcacggt ggagcggcga ttaaaagagg
     3361 cactcaagca cgatcgcgcc cgcatccagg tgggccgcat ctcgcatttc ggcttgctgg
     3421 aaatgtcgcg ccagcgcatc cgcacctctg tcctcgagag ctcgaccgaa aaatgtccgg
     3481 tgtgcggtgg aagcggtcac gtgcgctcag tgtcttcagt ctcgttgcag ctgttgcgcg
     3541 ctgttgagga aatgctgatc aaaggcgcga cccacaatct gatcgtccgc acccgcgccg
     3601 aagtggcgct ctatgtgctc aaccacaagc gtgcgcatct gcgcgccctg gaggagcgct
     3661 tccgcataac aatcaccgtg tcggccgatc ccgctgtaac agggcaacag tcctatgtga
     3721 tcgaccgcgg cgagcaggtg cactcgccgg aagccgcgcg caatcttgct gcgcagcaac
     3781 cgcagctcgt gcccgtcgcc gaagttgaag aagaattagt ggaagctgac ggcgatgagt
     3841 ccgccataga ggaaatggaa ggcgaacacc gcgtcggcag tgaacgcgag ggcggccgac
     3901 gacgcaggcg aaggcgcggc cgcggcggcc gcggtcgtgg cggtgagccg cgcgaggttc
     3961 agcaattccc gcaggagacc gtggctgagc atgccgtcgc acacgaggat cacgatgcgg
     4021 gttcacccga ggaagacgga tttggccaat cgcagccccg ccaggaaggc ggcgctttcg
     4081 gtgaaggcga gcatcgcgag gggcggcgtc gacgccggcg cggtcgccgt ggtggccgtc
     4141 gcaaccggca acgcaacagc ggcgagccga cggttcgttc cagcgaaaac ggacctgaac
     4201 ctgaattgca acacgcggtc gaggatctgg atcgtccgcc ggtctacgag agcagtcccc
     4261 cctactcgcc tccgatcgaa gagcggcctg ctccgccacc agcggaactg acagcgaccg
     4321 ctcccagcgg cacggagatc ctgcgccgtc ggtcgacaac tcgggagcca gcgtcgtttg
     4381 ccgatggtgc tcctccgccg gcttcgtctc cttcgtcggc gacgccgata gtttccagta
     4441 cgggatcgga cgaatccgca gcaaccccca ggcgcgggtg gtgggcgaag cgcctgctgg
     4501 gcgacaaagg ctagccgccc gatgaaatcc gcctgggtcg acagcgacgc gacaaaggct
     4561 gtcgatcatt gggcaaagac cagcatcggc gcggagttgg cgcaacgcat ctatacaact
     4621 cgcctgcttg gccgcgatcc cacgcttgtc ctgcacggcg gcggcaacac ttcggtaaag
     4681 acgcgggtta aggatctggt cggcgacgat gcggatgttc tctgcgtcaa gggttccggc
     4741 tgggacatgg caaacatcga gcccgcggga atgccggcgg tgcggcttga atctctgcgc
     4801 cggttgcgct ctcgtgcggc cctccccgac gcagagatgg tgcgcgcgca gcgtgccgcg
     4861 ttgatcgatc cgcaggcgcc caacccgtcg gtcgaaacgc tcttgcacgc gttcttgccg
     4921 cacaagtttg tcgatcatac acatgccact gcgatcctga gcctgatcga ccaggtggac
     4981 agcgaagcct tgtgtcagga ggccttcggt aaccgtcttg gcttcgtgcc ctacatcatg
     5041 ccgggctttg cgctcgcgaa gaaagcagcg gatgtgttcg agaaaaatcc tgcggtcgag
     5101 gggctgatcc tcgacaagca cggcattttc accgtcggta gcgacgcgcg cgaggcttat
     5161 gagcgtatga tcgaattcgt gacgctggcc gaagatcgct tgcgcaaaaa aggcaatgca
     5221 aagtttgtga gcgtcaggct ccccgaccgg attgcctcaa tgccggacgt tgctccaatt
     5281 gtgcgaggcg cttgtgcgct gcgcgatgcc ttcggcgaag gcgcgcacaa gcggcagatc
     5341 gtcgatttcc gcaccagcga cacgattctg aattacgtca acggcaaaga ggtggcccgc
     5401 tatgcccgag cgggactgat cacgccggat catgtgatcc gcaccggacc ctggccgctg
     5461 attgtcccgg cgccggaagc gggcaggctc gacgacttca agaatgccgt gcagcgagcc
     5521 gctcgcacct tcacggacga ctattctgcg tatttcgcgc gccaaaagac ccgcgccaag
     5581 ggcgccgcaa tgcgcgatcc ccttccccac gtcgtgctgg tgccgggcgt cggtctgatg
     5641 ggtctggggg caaacgcaaa agaggcgcgc attgcggccg atgtcgccga aacggcggcg
     5701 gaaggcatca gcggtgcgga agcgatcggg gagttcaagt cgatttccga agcggacatg
     5761 tttgatgtcg aatattggcc gctggaattg gccaagctgg gccagcgcaa gcgcctgccg
     5821 ctggaaggcc aggtcgcggc aatcaccgga gccggcggag tcatcggcgc ggcaacagcg
     5881 aaagccttcg cagatgccgg cgcggaagtg gccctgctcg acatcgatga gaaagccgtc
     5941 caagccacgg ccaagacgac cggcgggagc acgattgctg tcgtctgcga tgtgacgagc
     6001 gcggcatcgg tgcggacggc attcgatcac gtcgttgcag cattcggcgg cgtcgatatc
     6061 gtcgtctcga acgcgggtgc ggcctggcag ggcaagatcg gcgaggtcga cgaagctgtg
     6121 ctgcgcgaaa gcttcgagct aaattttttc gctcaccaga aagtcgcgca ggcggccgtg
     6181 aacatcatgc tcaagcag
//
LOCUS       DATDHO010000692         2859 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_78503, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000692 DATDHO010000000
VERSION     DATDHO010000692.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2859
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78503"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..837
                     /locus_tag="VIY07_13395"
     CDS             112..837
                     /locus_tag="VIY07_13395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382786.1"
                     /translation="MKGIGRVGPIAAFNPMLVLGCMACFALPALADSDPNACRGVDFD
                     MKRPLVASRISVRPHVNFVKGSDDDAACPTDKNVCRNKAYLVPGDVVLTGRAQGAFTC
                     ASYQSFHTRKQNWTVGWLPTSSLTPLEPMGSPKAADWIGTWSHPGGTISIKRSDGGKL
                     SIEGEHIYPAAQNVHTGVLGATAVPTQGMIAFAEDGSVPFDQAEEGQCLVRMQRVGTL
                     LLVEDNMQCGGSMVTFTGLYRRD"
     gene            1086..1937
                     /locus_tag="VIY07_13400"
     CDS             1086..1937
                     /locus_tag="VIY07_13400"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEY6382787.1"
                     /translation="MRNLPLFVCLCALAIFGTGAVRSEETSNDTPAAAAAGSANAAEQ
                     SRPPAAAAKPVVERSRREICDTLVQSAQSNALPIPFFIRLLLQESGFRPDVVSHAGAQ
                     GIAQFMPETAKSVGLDNPFDPLQAIAASARLLRDLVTKFGNLGLAAAAYNAGPRRIND
                     WLVRKGKLPRETQHYVKTITGRPAETWKGRRAPNTEQSLAKHAPCRDDAGAVASDTPR
                     APQIDARSRVLARSSQKKPSRTTLAQASASSARTSLARLAKRHKGGKGAVQLAAASKK
                     SRHKSQS"
     gene            2056..2736
                     /locus_tag="VIY07_13405"
     CDS             2056..2736
                     /locus_tag="VIY07_13405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019963193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY6382788.1"
                     /translation="MAASSPPTDLLSDLPEQLSSGLLANAKPVKLAANEILFLAGDPG
                     DGCFRLNEGLLKVSMVSPTGAERILAILGPGSIVGDMAMIDGRPRSASVSALRDCKLS
                     FVSRSAFEAVAGKNPEIYKHLLSLLAARLRDTDQVVAAGTFLPVKGRVARALLDLAKA
                     FGNEVGSGRVVIRQKLSQSDVAAMAGIARENVSRILNEWMRLKLVTRLSGYYCIENKA
                     KLEKELKL"
BASE COUNT          578 a          843 c          844 g          594 t
ORIGIN      
        1 gcttccctcc agcccctgtc catcagcccg ccgattcctt ttcatgctaa aagcttgccg
       61 cgaattacgc tagccctgtc aaattggcgt ggggattggg ggagtttcgc catgaaaggc
      121 atagggcgcg tcgggccgat cgcggctttt aacccgatgc tggtacttgg gtgcatggcc
      181 tgttttgctt tgccggcgct tgcggattcc gatccgaacg catgccgcgg cgtcgatttt
      241 gacatgaaac gacccctcgt cgcttcgcga atatcggtgc gcccacatgt caatttcgtg
      301 aagggttcgg acgatgacgc cgcctgtccc acggacaaaa atgtatgccg caacaaagcg
      361 tatctcgttc caggggatgt cgtattgacg ggtcgggcgc agggcgcctt cacctgtgct
      421 tcgtatcaat catttcatac gcgaaagcag aactggacgg tcggttggct cccgacctca
      481 tctctgactc cactggaacc gatgggctcg cccaaggcgg ccgactggat cggcacgtgg
      541 tctcatccgg gtggcacgat ctcgatcaag cgcagcgatg ggggcaagct gagcatcgag
      601 ggcgagcaca tttacccggc ggcacaaaat gttcacaccg gggtgctcgg cgcaacggca
      661 gttccgactc aaggaatgat cgcttttgcc gaggacggca gtgttccgtt cgatcaagcc
      721 gaagagggtc aatgcctggt ccgcatgcag cgcgtaggca ctttgctgct tgtggaagac
      781 aacatgcaat gcggcggttc catggtcacc ttcacgggtc tctatcgccg cgactaacag
      841 acgcatcatt gtgaaaatta ttgcctgcaa tttgtgattt cgcgacgtgg ctttgcttac
      901 atcggtcacg cgaagaaact gacctacgcc aaaagcctcc gctccacatt tttttcacaa
      961 gcattcccga attctgtccc gattcgaatg cacctagcgc gcgcacggtg aggggatccc
     1021 accttttaaa ttcaatattt gtgacatgcg tctctgcgcg tgcgtccgca tttcgagagg
     1081 acgacatgcg caatttgcct ctgttcgttt gtctttgcgc gctcgccatc ttcggcactg
     1141 gcgctgtgcg cagcgaggaa acaagcaacg acactccagc ggcagctgcc gcaggttccg
     1201 cgaacgccgc ggaacaatcc cgtccgccgg cggccgctgc gaaaccggtc gtggaacgct
     1261 caaggcgtga aatctgcgac acgctcgtgc agtccgccca atcgaatgcg ttgccgattc
     1321 ccttcttcat ccgcctgctg ctgcaggaaa gcggcttcag gcccgacgtg gtgagccacg
     1381 ccggcgcaca agggatcgcg caattcatgc cggagacggc gaagtccgtg ggtctcgaca
     1441 atccgttcga ccctctgcaa gcaatcgctg cctcggcacg gttgttgcgc gatcttgtga
     1501 cgaagttcgg caatctcggt ttggcggccg ctgcgtacaa tgccggtccg cgccgcatca
     1561 acgattggct ggtcaggaaa ggcaaattgc cgcgggagac gcagcattac gtgaagacga
     1621 ttaccggacg tccggcggaa acgtggaagg gcagacgggc gccgaatacc gaacagagct
     1681 tggccaagca cgctccgtgc cgtgacgacg caggggccgt tgcctccgac acaccacgcg
     1741 cgccccaaat cgatgcccgg tcacgtgtcc tggcgcgttc cagccagaag aaaccatcca
     1801 ggactaccct tgctcaagca tcagccagtt cggccagaac gtcgttggcc cggctcgcga
     1861 agcgccacaa aggtggaaaa ggtgctgtcc aactggcagc ggccagcaaa aagagccggc
     1921 ataaatcgca gtcataacgg cgctgcgccg cttcagttgc ccgggttccc atgagctggg
     1981 ccccaccagt gccctttttg atgcaatttc tgctacaaga ccgacgcgtc atagttcgtt
     2041 cgcgtcgggt gtctgatggc tgcgtcctcg cctcccaccg atctgttgtc ggatctgccc
     2101 gaacagctgt cgtccgggct gctcgcaaac gcgaagccgg tcaaacttgc cgccaacgaa
     2161 atcctttttc tggctggcga ccccggggac ggctgcttcc gtctcaatga aggcttgctg
     2221 aaagtcagca tggtatcgcc tacgggcgct gagcgtatcc tcgcgatact cggccctggt
     2281 tcgatcgtcg gcgacatggc gatgatcgac ggccgtccac gctcggcttc ggtgtcggcg
     2341 ctgcgcgact gcaagctgag tttcgtcagc cgttccgcat tcgaagctgt ggcgggaaag
     2401 aaccccgaaa tttacaagca ccttctcagt ctgctcgccg cccgtttgcg agatactgat
     2461 caggtggttg cggccggaac atttctgccg gtcaaaggac gtgtcgcgcg cgcgctgctc
     2521 gacttggcca aggcattcgg caatgaagtc gggagcggcc gcgtcgtcat caggcagaaa
     2581 ctgagccaaa gcgacgtagc tgcaatggcc ggcattgcac gcgaaaatgt cagccgcatc
     2641 ctgaacgaat ggatgcgtct gaaattggtt acccggctat ccggttacta ttgcatcgag
     2701 aacaaggcga aactcgaaaa ggagttgaag ctttagtgtt caggggcaag gctgatgtcg
     2761 gatgaggtcg tgggtttcgg ctttctcgcc gaatcggaca tcccggtgtg gtacctgaaa
     2821 gcgggcgaga caatctttaa agagggagaa acggcgaag
//
LOCUS       DATDHO010000693         1513 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_429859, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000693 DATDHO010000000
VERSION     DATDHO010000693.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1513)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1513)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_429859"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1482)
                     /locus_tag="VIY07_13410"
     CDS             complement(<1..1482)
                     /locus_tag="VIY07_13410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HEY6382789.1"
                     /translation="MSLRMPEPDSAILQRRERIVAALRAIVPGEGVIAAERELRPYES
                     DGLTAYRQLPMVVVLPETTEQVADVLRYCHAEGIKVVPRGAGTSLSGGALPLADGVLL
                     GMAKFNRIREIDFDNRVAVVEPGVTNLAVSNAVAHAGFYYAPDPSSQIACTIGGNVAE
                     NSGGVHCLKYGMTTNNVLGCEIVLMTGEVLRLGGKQLDASGYDLLGVINGSEGLLGVV
                     TEVTVRILKKPETARAMLVGFSSSEDSGECVSQIIGAGIIPSGMEIMDGPAIAAVEQF
                     VQAGYPLDVEALMIVEVDGPTAEVDHLIERIEKIARDCGATSCRASRSEDERLLFWAG
                     RKAAFPAVGRISPDYYCTDGTIPRAKLPLVLKRMKEMSAKYGLRVANVFHAGDGNLHP
                     LVLYDANVPGELERTEEFAAEILKLCVEVGGVLSGEHGIGVEKRDLMPVMFSELDLNQ
                     QQRVKCAFDAKGLLNPGKVFPQLHRCAELGRLHVHAGKVPFPDI"
BASE COUNT          307 a          498 c          421 g          287 t
ORIGIN      
        1 aatatcggga aacggcacct tcccggcgtg gacatgcagg cggcccaatt cggcacagcg
       61 atgcaattgc ggaaacactt ttccgggatt gagcagcccc ttggcgtcga aagcgcattt
      121 aacgcgttgc tgctggttca ggtcgagttc cgaaaacatg accggcatca ggtcccgctt
      181 ctctacgccg atcccgtgtt caccggatag aacgccgccc acttcgacgc agagtttcag
      241 gatttcggcg gcgaattcct cagtcctctc cagttcgcca ggcacattgg catcataaag
      301 aacaagtgga tgcagattgc cgtcgccggc atggaaaaca ttggcgacgc gcagaccgta
      361 tttcgccgac atttctttca tccgcttgag aaccagcggc agtttggcgc gcggaatggt
      421 gccatccgtg cagtagtagt caggcgaaat gcgcccgacc gcggggaatg ccgccttgcg
      481 gcccgcccag aacagcagcc gctcgtcttc agagcgcgaa gccctgcacg aggtggcgcc
      541 gcagtcgcgc gcgatctttt cgatgcgctc gatcagatga tcgacctcgg cagtgggtcc
      601 atcgacttcg acgatcatca acgcctcgac atccagcgga tacccggctt gaacaaattg
      661 ctcaaccgcc gcgatggcag gaccgtccat gatctccatt ccgcttggga taattccggc
      721 gccaatgatc tgggacacgc attcccctga atcttccgac gacgagaacc cgaccagcat
      781 cgcgcgcgca gtctcgggct tcttcaggat gcgcacggtc acctcggtaa caacgccgag
      841 caggccttcc gacccgttga tcacaccgag cagatcataa ccggacgcgt cgagctgttt
      901 cccgccgagc cgcagcacct cccccgtcat caacacgatc tcacaaccca gaacgttgtt
      961 tgtggtcatg ccatacttca ggcaatgcac gccgcctgaa ttttccgcaa cgttgccgcc
     1021 gatggtgcag gctatctgcg acgatggatc aggggcgtag taaaagccgg catgggcaac
     1081 tgcattgctc accgcgagat tagtgacgcc gggctccacc accgcaacac gattgtcgaa
     1141 atcgatttca cgaatgcgat tgaatttcgc catcccgagc agcacaccgt ccgccagtgg
     1201 cagcgccccg cccgagagcg acgtgcccgc tccccgcggg accaccttga tgccctcggc
     1261 atggcaataa cgcagcacgt ccgcgacctg ctcggtcgtc tcgggcagca cgacaaccat
     1321 cgggagctga cggtaggcgg tgaggccatc gctttcgtac ggcctgagtt cgcgctcggc
     1381 cgcgatcacg ccctcgccgg gcacgatcgc ccgcagtgcc gcgactatgc gttcacggcg
     1441 ttgcaggatt gcgctatccg gctccggcat tcgcagggac atcaactaac tcccggctgc
     1501 tcgtacatct gtg
//
LOCUS       DATDHO010000694         5973 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_330825, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000694 DATDHO010000000
VERSION     DATDHO010000694.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5973)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5973)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5973
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330825"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..94
                     /locus_tag="VIY07_13415"
     CDS             <1..94
                     /locus_tag="VIY07_13415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEY6382790.1"
                     /translation="CVDHAIKSGNKADQRRKVAELMDVMGRAAR"
     gene            complement(151..1173)
                     /locus_tag="VIY07_13420"
     CDS             complement(151..1173)
                     /locus_tag="VIY07_13420"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HEY6382791.1"
                     /translation="MMFPSTVAGSLPKPSWLAEPNKLWPQWRQQGSDLASAKLDATLL
                     AIKWQEDAGIDIVSDGEMSRQHFVHGFLKFVEGIDFSHKVEMGIRADRYKAMVPVVRG
                     DLKLKGRVHQAEACHARAHTGRKLKMTLPGPMTISDTIADAHYGDKIKMAMAFAALLN
                     KEARALEADGVDVIQFDEPAFNVFMSEVAGWGIEALHCAIDGLKCTTAVHICYGYGIK
                     ANIDWKNSLGNEWRQYEEIFPALAKSRIGQVSLECINSRVPLKLLSLLEGKDVLVGVI
                     DVATDEVETPQRVAQVIGEVMKFVPREKIIACTNCGMAPMRRDIAEAKLLALGQGAAL
                     ARKKYA"
     gene            complement(1170..2387)
                     /locus_tag="VIY07_13425"
     CDS             complement(1170..2387)
                     /locus_tag="VIY07_13425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY6382792.1"
                     /translation="MAPARHVIVAGAGIAGLTAALAMARAGIRVTVFEQSEKLEETGA
                     GVQLSPNGSRVLIAMGLGDRLASVAVKPQAIRVMAGGSGREIVRIPLGEELERRYGAP
                     YWSVHRGDLQSALADAVSKQLDVTLELGVRVEDFAAHVRGVSVLGKRGSQILDERGIA
                     LIGADGIWSNVAAGLHRQSPPRFRHRTAWRALVSADAVPAEFREPLVHLWLGQDAHLV
                     HYPVKAGKLINLVGIVHDEWNETGWSASGERAEILRHFARWAWSEKARALIAIPDRWL
                     KWALYDRKDPFRGAKVPVTLIGDAAHPMLPFLAQGASMAIEDAAVLADMLAKYLDDPA
                     DALRAYEGARWHRAARAQQFSRRQKRIYGLSGPEALVRNLAMRTMGGERLRARYDWLY
                     SWRPPQRYEIIPA"
     gene            complement(2406..2654)
                     /locus_tag="VIY07_13430"
     CDS             complement(2406..2654)
                     /locus_tag="VIY07_13430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEY6382793.1"
                     /translation="MAEHVVPHFHNDPGVPVIEIGAREFMCVGATPPFDHPHVFLDMG
                     EDKEIICPYCSTLYRFDPSLDPHAARPPQCALAHSAAA"
     gene            2866..3921
                     /locus_tag="VIY07_13435"
     CDS             2866..3921
                     /locus_tag="VIY07_13435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382794.1"
                     /translation="MMALVAAVVLAAVAAYAVPRAAKMLAGMDDPARIAHHALNDKFD
                     AGVARHEIEAALAAGDADLAQSFADLAADRGVALDPSLLERVNAATAEAATTRHKVKS
                     FARGLVSGEPDDMAALAGTAVGDLFVFGDIRDAVREGTRLVRGQAADELVLGLASAGI
                     AITAATYVTFGTAAPARAGLTVVKVARKTGSLGTELAGSLGRLVRQAGFSEPATGARV
                     GRQAVKVERVGGGLVDFARDVGRVQKAAGGRAAFDGLKIAKEPRDMARVAKLAEKEGS
                     RTRAILKIAGRSAIMLAAFAFDASLWLLGALFAVFGFVSSLKSATERMTLRILRRRKE
                     RRRLKQAQPIAAVLAHS"
     gene            3931..4683
                     /locus_tag="VIY07_13440"
     CDS             3931..4683
                     /locus_tag="VIY07_13440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6382795.1"
                     /translation="MSRFRNGDVEIAYLDEGQGEPMVLVHGFASTKEVNWVHPGWVTT
                     LARAGRRVIALDNRGHGASSKLYDPAMYHSATMADDVRVLLDHLNIERADVMGYSMGA
                     RITAFLVLSHAARVRSAIFGGLGIRLVEGVGLPESIADALEAPSHDDVRDPTGRMFRI
                     FAEQTKSDLRALAACIRGSRQTLSASQVASIHVPVLVAVGTKDQVAGSARELAALIPG
                     ARALDISDRDHMLAVGDKVFKAGVIDFLNQRA"
     gene            4780..5610
                     /gene="cysE"
                     /locus_tag="VIY07_13445"
     CDS             4780..5610
                     /gene="cysE"
                     /locus_tag="VIY07_13445"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEY6382796.1"
                     /translation="MAQFQTRPSRGLDKVDPVWARIRSEAEDVTRREPELATFIYENI
                     LHHDTLEAAIAHRVSQRLAHADVSADLIRQAYNDALEDQPALGEAFRADIVATVDRDP
                     ATSRFIEPVLYYKGFHAIQTHRLAHWLYGKGRKDFALYLQSRASSVFQCDINPAAKIG
                     RGIFLDHATGLVVGETAVIEDDVSILHDVTLGGTGKQQEDRHPKIRRGVMIGAGAKIL
                     GNIEVGHCARIAAGSVVIKPVPNNVTVAGVPARVVGEAGCPEPSRTMDQMLYGIMLDG
                     "
     gene            5679..5861
                     /locus_tag="VIY07_13450"
                     /pseudo
     CDS             5679..5861
                     /locus_tag="VIY07_13450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611186.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3126 family protein"
BASE COUNT         1172 a         1783 c         1861 g         1157 t
ORIGIN      
        1 ctgtgtcgat cacgcaatca aaagcggcaa caaggccgat cagcggcgca aggtcgcaga
       61 gctgatggat gtgatgggac gggcggcgag gtaaggcctg ccgcagctac gactccgttc
      121 atcccgcgaa agcgaacggc ggaagtgcgt ctacgcgtat ttttttcgtg caagcgcagc
      181 gccctggcct aacgcaagca gcttcgcttc ggcaatgtcg cgccgcatcg gcgccatgcc
      241 gcagtttgtg catgcaatga tcttttcccg cggcacgaat ttcatcacct cgccaatgac
      301 ctgtgcgact cgctgcgggg tctccacctc gtcagttgcg acatcgatca cgccgaccag
      361 cacgtccttg ccttcgagca gggaaagaag cttgagcggc acgcgcgaat tgatgcattc
      421 aagcgagact tggccgatgc gacttttggc gagcgccgga aaaatctcct cgtactggcg
      481 ccattcgttg ccgagcgaat tcttccagtc gatattggcc ttgatgccgt agccatagca
      541 gatatggacg gcggtggtgc acttgaggcc gtcgatagcg caatgcaacg cctcgattcc
      601 ccagccggcg acttcgctca taaacacgtt gaaagccggt tcgtcgaact gaatcacgtc
      661 aacgccgtcg gcttccagtg cgcgggcttc cttgttgagc agggccgcga atgccatcgc
      721 catcttgatc ttgtcgccgt aatgcgcatc ggcaatggta tcggaaatcg tcatcggccc
      781 cggcagggtc atcttcagtt ttcgcccggt gtgtgcgcgc gcgtgacagg cttccgcctg
      841 gtgcacccgg cccttgagct tcagatctcc gcgcaccacg ggcaccattg ctttataacg
      901 atcagcgcgg attcccattt cgaccttgtg cgagaagtcg attccctcaa cgaatttgag
      961 aaatccgtgg acgaaatgct gacgcgacat ctcgccgtcg gagacgatgt cgatcccggc
     1021 atcctcctgc cacttgatgg ccagcaatgt ggcgtcaagc ttggctgagg cgagatcgct
     1081 gccttgttgc cgccattgcg gccacagctt gttcggttcg gcgagccaag acggttttgg
     1141 aaggctgccg gcaacggtcg acggaaacat catgccggaa tgatctcgta gcgttgtgga
     1201 ggccgccaac tatagagcca atcgtagcgg gcgcgcagtc tttctccgcc catcgttcgc
     1261 attgccagat tgcggacaag cgcttccggc ccactcagcc cataaatgcg cttctggcga
     1321 cgggaaaatt gctgggcgcg cgcggcgcga tgccaacgcg cgccttcgta ggctcgcaac
     1381 gcgtcagcgg ggtcgtcgag atatttcgcc agcatatcgg ccagaactgc ggcatcctcg
     1441 atcgccatgc tggcgccttg cgcgagaaac ggaagcatag gatgcgcggc gtccccgatc
     1501 agggtgaccg gcaccttcgc gccgcggaac gggtccttgc ggtcatacaa tgcccatttc
     1561 aaccaacgat ccggaattgc gatgagtgca cgcgcctttt cggaccaggc ccaccgcgcg
     1621 aaatgtcgga gaatttcggc gcgttcgcca ctcgccgacc atccagtctc gttccattcg
     1681 tcgtgcacga tgccgacaag gttgatcaat ttgccggcct ttaccggata gtgcaccaaa
     1741 tgtgcgtcct gcccgagcca cagatgcacc agcggctcgc gaaattcggc cggtaccgca
     1801 tccgccgaaa caagcgcgcg ccaggcggtg cggtgacgga atctcggcgg ggactgtcgg
     1861 tgcaaacccg cggcaacgtt cgaccagatt ccatcggcgc cgatgagcgc gatcccgcgc
     1921 tcgtcgagga tctggctgcc acgcttgccg agcacgctga cccctctgac atgggccgca
     1981 aagtcttcga cccgaacgcc cagctcaagg gtcacgtcga gctgcttgct gacagcgtcc
     2041 gcgagcgccg attgcagatc cccacgatgg accgaccaat agggggcacc gtaacggcgt
     2101 tccagctctt ccccgagggg aatgcgcacg atctcccggc cagagccccc tgccatcacc
     2161 cggatcgcct gcggcttgac cgccaccgag gcaaggcggt cgccaagccc catggcgatc
     2221 aggacgcggc tcccgttggg cgaaagctga accccggcac cggtttcttc cagcttttcg
     2281 gattgctcga agaccgtcac acgaatcccg gcgcgcgcca tggctagcgc ggcagtcaat
     2341 ccggcgatgc ctgcgccggc tacgatgaca tgacgcgctg gcgccatggc gcaatcccga
     2401 tgaagtcagg cagctgcgga atgcgccagc gcgcactgcg gtggtcgcgc cgcgtgagga
     2461 tcaagcgacg gatcgaagcg atagagcgtt gagcaataag ggcaaatgat ttccttgtcc
     2521 tcgcccatgt cgaggaagac atgcggatga tcgaaaggcg gggtcgcgcc cacacacatg
     2581 aattccctgg cgccgatctc gatcaccgga acgcccggat cgttgtgaaa gtgggggaca
     2641 acgtgttccg ccattggcca atcctttgct accgcactgc ggcggggact tttcggccgc
     2701 accatagcga caccggtttg taatgcctag ctgaattgag aaaccacagg gcttcgatgc
     2761 cgtcgaaacg ccttggttgg caggcacagg tcgagacgac gatcacgatt catggagcgg
     2821 agcttggaac cgtcgcagcg aagcggagtg cgcgccaggg gcattatgat ggccttggta
     2881 gcggcagtag tgctcgcggc ggttgccgcc tatgcggtgc cgcgggcggc caagatgctt
     2941 gccggcatgg acgaccccgc gcgaattgcc catcacgcac ttaatgacaa gtttgacgcc
     3001 ggggtggcaa ggcacgagat cgaggcggcg ctcgccgcag gcgatgccga tcttgcccag
     3061 agctttgccg atcttgcagc cgatcggggt gtcgctctcg acccatcgtt gttagagcgg
     3121 gtgaatgctg cgaccgccga ggcggccacc actcgccaca aggtgaaaag ctttgcccgc
     3181 ggcctggtca gcggcgaacc ggacgatatg gcagcgctcg ctggaactgc cgtcggcgat
     3241 ctgtttgttt tcggcgacat tcgcgatgca gtacgcgaag gaacgcggct ggtaagagga
     3301 caagcagccg atgagcttgt gttgggcttg gcatccgcag gcatcgccat taccgcagcg
     3361 acctacgtga cctttggcac tgccgcgcca gcccgcgccg ggcttaccgt cgtaaaggtc
     3421 gcgcgcaaga ccggaagtct cgggaccgag cttgccggca gtctcggtcg cctggtgcgt
     3481 caggcgggtt tttcagagcc agcgacgggg gcgcgtgtcg gacgccaagc ggtcaaggtc
     3541 gagcgtgtcg gcggcggatt ggttgacttt gcacgcgatg tcggtcgggt tcagaaagca
     3601 gccgggggtc gagctgcatt cgatggtctg aagatcgcga aagagccgcg cgacatggcg
     3661 cgggtcgcca agctggccga aaaggaaggg agccgtacgc gcgccatcct gaagattgcg
     3721 ggacggagtg caatcatgct cgcggcattt gctttcgatg caagcctctg gctgcttggt
     3781 gcgttgtttg cagtttttgg ttttgtatcg tcgctcaaga gcgcgaccga gcgcatgacc
     3841 ttgcgaattc tgcgtcggcg caaggagcgg cggaggctga agcaggcgca accgattgcc
     3901 gctgtgctgg cgcacagcta aaaatcacgc atgtcacgtt tcaggaatgg cgacgtcgag
     3961 attgcctatc tcgacgaagg gcagggcgag ccgatggtgc ttgtgcacgg cttcgcgtcc
     4021 accaaggaag tgaattgggt gcaccccggt tgggtcacga cactcgcccg ggccggccga
     4081 cgcgtgattg cgctcgacaa ccgaggccat ggcgcgtcga gcaaacttta cgatccagcc
     4141 atgtatcaca gcgcgacaat ggctgacgat gtacgcgtgc tgctcgatca cctgaatatc
     4201 gaacgagccg acgtgatggg ttattcgatg ggcgcccgca tcacggcgtt tctcgtccta
     4261 agtcatgcgg cgcgcgtgcg gtccgcgatt tttggcggac tcggcattcg actggtagaa
     4321 ggtgttggcc tgccggagag cattgcggac gcgctggaag cgccttcgca cgatgatgtg
     4381 cgtgatccga ccgggcgcat gtttcgcatt tttgccgaac agacaaaatc agacttgcgc
     4441 gcgctggccg catgtatccg cggctcacgt cagaccttga gcgccagtca ggtggccagc
     4501 attcacgtac cagtgctggt cgccgtgggg accaaggatc aggtagcagg cagtgcccgg
     4561 gaattggcgg cgctcattcc cggggctcgc gcacttgata tttcggatcg tgatcacatg
     4621 ctcgcggtcg gcgacaaggt cttcaaggca ggcgtcatcg acttccttaa ccaacgcgca
     4681 tgagccatgc gtaagacgcc gcacctgccg ctcttggcgc ttgcaaaatt gtgataaaag
     4741 agcatctgct gattaatagg tgccgggaga aactggtcca tggctcaatt tcagacgcgg
     4801 ccctcacggg gcctcgacaa ggtcgatcca gtctgggcgc gcatccgcag cgaagctgag
     4861 gacgtgacgc gccgcgagcc ggagctcgcc acctttatct acgagaacat tcttcatcac
     4921 gacacgctgg aggcggcgat cgcgcatcgc gtgagccagc ggctcgcgca cgccgacgtc
     4981 tcggccgacc tgattcgcca agcctataac gacgcgcttg aggaccaacc tgcgctcggc
     5041 gaagctttcc gcgccgatat agtcgccact gtggaccgtg atccagcgac cagccgcttt
     5101 atagagcctg tgctttatta caaaggcttc cacgccatcc agacccatcg cctggcacac
     5161 tggctctacg gaaagggccg caaggatttc gcactatatc tgcagagccg ggcgtcgtcc
     5221 gtatttcagt gcgatatcaa tccggcggcg aaaattggcc gcggcatatt ccttgaccac
     5281 gctacggggc ttgtggtggg tgaaacggcg gtcattgagg acgacgtttc gatcttgcac
     5341 gacgtgacgt tgggcgggac gggaaaacag caggaagacc gccatccgaa aatccgtcgc
     5401 ggcgtgatga tcggcgccgg cgcaaagatt ctcggcaata tcgaagttgg tcattgtgcc
     5461 cgcattgctg ccggctcggt cgtcataaaa ccggtaccca acaatgtcac ggttgctggc
     5521 gtgcctgccc gggtcgtggg tgaggccggt tgccccgagc cttcgcgcac catggatcag
     5581 atgctttacg gtattatgct cgacggctga actggaccta cacttgcgcc gggccgtttg
     5641 atcgggcaag gaatgttggt tcaagacagg agcggatcgt ggacgtccat gaagtgcgga
     5701 aaattgacgg ctatctgaaa aagctgtttg gcaacgcgca cattcgcgtg gtgccgaaat
     5761 cctacgatac cgccgaaatt ttcgttggcg aggacgatct cggcgagctc accgtcgacg
     5821 atgaggaggg cgagcgctcg tacaacttcc ggatggttat tcaggttggc aacgacccca
     5881 gcattcagcc cgtgccgact ctcagtgcct atctgcgaag caagttcgac aacgaaaaaa
     5941 ttcgcgtcgt gccgcgcccg aagaaaaccg att
//
LOCUS       DATDHO010000695         1635 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_475106, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000695 DATDHO010000000
VERSION     DATDHO010000695.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475106"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..879
                     /locus_tag="VIY07_13455"
     CDS             <1..879
                     /locus_tag="VIY07_13455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HEY6382797.1"
                     /translation="KGNNGKSGATKVSAQPFRTAMFQLAKSVDDAIAPIIDGCMLVVP
                     REVSGVPMTATRALIRRGIKRLHLVALPTSSLQADLLVGAGCVETLETSAVSLGEFGP
                     APRFGAAVTSGTIKLRDATCPALHAALQASEKGVPFMPLRGLLGSDVLRYRDDWKVIA
                     NPFGDNDPIVLLPAIKPDVALIHAPMADGFGNVWIGRQRELATMAHAADKTIATVEKI
                     HDGNLLDDPVLAAGTLPGFYVDAVAVAERGAWPLGLPDHYGADADHLALYARMAASEA
                     GFAEYLDRYVYEKRAA"
     gene            919..>1635
                     /locus_tag="VIY07_13460"
     CDS             919..>1635
                     /locus_tag="VIY07_13460"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HEY6382798.1"
                     /translation="MRSGYRDEELLADVIARLIGRVRHVAVGNASPIPATAALLARER
                     GGDRPYVSLLQSRKHNFFTDGARELFDCAGQGRIDVFFLSGGQIDGHGNVNLVSTGEY
                     ERPTVRFPGSFGSAYLYYVVPKVILFRTEHSRRTLVPKVDFISAPGVSEANVYRPGGP
                     IALVTNRCLFSFANGRFTLTSVHPGHTTEEVLENTGFNFDRPDSVPETPAPTSETLRL
                     MREVVAPQLAEVYPQFATQVF"
BASE COUNT          304 a          499 c          521 g          311 t
ORIGIN      
        1 aagggcaaca atgggaaaag tggtgctacg aaagtttccg cgcaaccatt ccggaccgct
       61 atgtttcaac tggcgaaatc agtcgatgat gccatcgcgc cgatcatcga cggttgcatg
      121 cttgtggtgc cgcgagaagt ctcgggcgtg ccgatgacgg cgacgcgcgc gctgatcagg
      181 cgaggcatca agcggctcca tcttgtcgcc ttgccaacgt caagtcttca ggccgatctc
      241 ctcgtcggcg ccggctgcgt cgagaccctg gaaacaagcg cggtaagcct cggggaattc
      301 ggcccggctc cgcgtttcgg cgcggcagtc acatcgggca cgattaaact gagggacgca
      361 acttgcccgg ctttgcatgc ggcgttgcag gcatccgaaa aaggcgtgcc gttcatgcca
      421 ttgcgcgggc tgctcggttc ggacgtgctg aggtatcgcg acgactggaa ggtgatcgcg
      481 aacccgttcg gcgacaacga tccgatcgtg ttgttgccgg cgatcaaacc ggacgtggcc
      541 ttgatccacg cgccgatggc cgatggcttc gggaatgtct ggatcgggcg ccagcgagaa
      601 ctggccacca tggcgcatgc cgcggacaag acgattgcca ccgtggagaa aatccacgac
      661 ggaaatttgc tggacgaccc ggtactcgcg gccggcacac tgcccggttt ctatgtcgac
      721 gccgtcgccg tggccgagcg cggcgcctgg ccgctcggat tgccggatca ttatggtgcc
      781 gacgccgacc acctcgcgct gtacgcgcgc atggcggcga gcgaggcggg atttgcggag
      841 tatcttgatc ggtatgtgta tgaaaaacgg gcggcgtaat ttgtcgtcat gcccggccat
      901 gacaccggag agcacgacat gaggtcgggc taccgcgacg aagagctgct cgccgacgtc
      961 atcgcgaggc tgatcggacg cgtccgtcat gtcgctgtcg gcaatgcctc gccgatcccg
     1021 gcaaccgccg ccctgctggc gcgcgaacgc ggcggggacc gtccgtacgt ttccctgttg
     1081 caaagccgga aacacaattt cttcaccgac ggcgcgcgcg aattgttcga ctgcgccggt
     1141 cagggccgca ttgacgtgtt ctttctgtcg ggagggcaga tcgacggtca cggcaacgtc
     1201 aacctggtga gcacgggcga gtacgagcgg ccgacagtgc gcttccccgg ctccttcgga
     1261 tccgcgtatc tctattatgt cgtgccgaaa gtgatccttt tccgcaccga acattcgcgc
     1321 cgcaccttgg tgccgaaggt cgacttcatc agcgcgcccg gtgtaagcga agccaatgtg
     1381 tatcgcccgg gcgggccgat cgcgctggtg acaaaccgtt gtctgttcag ctttgcaaac
     1441 ggacgcttca cgctgaccag cgtgcacccg ggccatacga ccgaagaggt cctagaaaat
     1501 acgggattca attttgaccg gccggacagt gtgcctgaaa ctccggcgcc cacctccgag
     1561 acgctcaggc tcatgcgcga ggtcgttgcg ccgcaattgg ccgaggttta tccgcaattc
     1621 gcaacgcagg tcttc
//
LOCUS       DATDHO010000696         1509 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_182328, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000696 DATDHO010000000
VERSION     DATDHO010000696.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1509)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1509)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1509
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_182328"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..814
                     /locus_tag="VIY07_13465"
     CDS             <1..814
                     /locus_tag="VIY07_13465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY6382799.1"
                     /translation="TQLFPTKDDLKRSFGAIVRGTGVGTFFGVLPGTTPAIASFSSYM
                     VEKKLASDPSRFGRGAIEGVAGPESANNADAQCKFIPMLTLGIPASGTMALMLGALMI
                     YGIAPGPQVMTEKPDLFWGLIASMWIGNVMLVVLNLPLIGMWVSLLKLPYRLLFPAIM
                     AFSAIGIYSVNNSSFDIYLTAIFGILGIIWRMLDCSPVPMMLGFVLGPMVEENLRRTL
                     QVSRGDPSVFFTRPISLAFIVATVLILIVMAAPAVRKWWGAAGASSREGVAE"
     gene            898..>1509
                     /locus_tag="VIY07_13470"
     CDS             898..>1509
                     /locus_tag="VIY07_13470"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEY6382800.1"
                     /translation="MDTDQILLAVVVLLTAVVIAGGVAKKLNLGSTVALLAVGMALGP
                     HSPKPLLTDHVDELQAVGEIGVVLLLFLVGLGTQPKRLLSMRRLVLGLGTAQLLLTAA
                     AIAGLLIAVALEQWQWALIVGLGLAMSSDAVAISTLEERAESASPLGQAVMAVLINQS
                     FMVIVVLAVIPILAAGLTQGIPVPNLDKAFEVIAAVAAVYGLGR"
BASE COUNT          262 a          413 c          483 g          351 t
ORIGIN      
        1 gacgcagctc tttcccacga aggacgacct gaagcggtcc ttcggcgcga ttgtcagagg
       61 gacgggggtc gggacattct tcggtgtgct gcccggcacc acgccagcga ttgcatcgtt
      121 ttcgtcctat atggtcgaga agaagctcgc cagcgaccct tcgcgtttcg gccgcggtgc
      181 gatcgaagga gtggcgggac ccgagtccgc caacaacgcc gacgcgcagt gcaagtttat
      241 cccgatgctg accttaggaa ttcccgcaag cgggacgatg gcgctcatgc tcggcgcgct
      301 gatgatttac ggtattgctc ccgggccgca ggtgatgacc gagaaacccg atctcttctg
      361 gggactgatc gccagcatgt ggatcggcaa tgtgatgctg gtggtactca acctaccgct
      421 gatcggcatg tgggtgagcc ttctcaagtt gccctaccgc ctgctttttc ccgctatcat
      481 ggcgttctcc gctatcggca tctacagcgt gaacaacagc tcgttcgata tctatctcac
      541 ggcgattttc ggcattctcg gcatcatctg gagaatgctc gattgcagcc cggtgccgat
      601 gatgctcggg ttcgtgctcg gaccgatggt cgaggaaaac ctgcggcgga cgttgcaggt
      661 ctcgcgcggg gatccctccg tgttcttcac ccggccgatc agccttgcgt ttatcgtcgc
      721 tacggtgctg attttgatcg tgatggcagc gccggccgtg cgcaaatggt ggggagcggc
      781 cggagcttcg tcgcgtgaag gggtggctga atgaaagaga gatttttgga taccgtttgt
      841 tgaactccac tcgacgctac ggaagcgcaa cggcgtcata gccaggagga aaagggcatg
      901 gacaccgatc aaatattgtt ggctgttgtc gtgctgctta cagcggtcgt catcgcgggc
      961 ggcgtggcga agaagttaaa tctgggctct accgtggcgc tgcttgccgt cggaatggcg
     1021 ctcggcccgc attcgccgaa gccgctgttg accgatcacg tcgatgagct gcaagcggtg
     1081 ggcgaaattg gtgtggtact tttgctcttt ctagttgggc taggcactca gccgaagaga
     1141 cttttgtcga tgcgccggct cgtcttgggt ttgggcaccg cgcagctttt actcaccgcc
     1201 gctgctatcg ccgggctgct gatcgcggtg gctctggagc agtggcaatg ggcactcatc
     1261 gttggcctcg gtttagcgat gagctctgac gcggtcgcga tttccactct ggaggaacgt
     1321 gccgaaagcg cgagcccact cggacaggcg gtgatggctg tgctgatcaa tcaaagcttc
     1381 atggtgatcg tggtcttggc ggttattcca atcctcgctg cgggcctaac gcaaggtatt
     1441 ccggtgccga accttgacaa agcgtttgaa gtgatcgctg cggttgcggc cgtctacggc
     1501 ttggggcgc
//
LOCUS       DATDHO010000697         4687 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_281786, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000697 DATDHO010000000
VERSION     DATDHO010000697.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4687
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281786"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..1112)
                     /locus_tag="VIY07_13475"
     CDS             complement(108..1112)
                     /locus_tag="VIY07_13475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY6382801.1"
                     /translation="MASGESLEKLEDMIVRAAESTAAHVRAAKTAIGAVIFGQDVVVE
                     QALVTVLSGGHALLIGVPGLAKTKLVETMGIVLGLDARRIQFTPDLMPSDILGTEVLE
                     ESPGGKRSFRFIAGPVFAQLLMADEINRASPRTQSALLQAMQEQHVTVAGQRHDLPKP
                     FHVLATQNPLEQEGTYPLPEAQLDRFLMEVDVDYPDQEAERKILFDTTGAEESRAKPA
                     MTAEDLLSAQRLVRRLPVGESVVEAILALVRSARPGPEGGEIGKLISWGPGPRASQAL
                     MLAVRARALLDGRFAPSVEDVLELAEPVLKHRMAITFAARAEGETIPNVIRRLKARIG
                     "
     gene            1308..1895
                     /locus_tag="VIY07_13480"
     CDS             1308..1895
                     /locus_tag="VIY07_13480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1285 domain-containing protein"
                     /protein_id="HEY6382802.1"
                     /translation="MAKAGQGGLEGIAAGLPRENKGLPPVERWNPPYCGEIDMRIAAD
                     GTWFYQKTPIGRPALVKLFASVLKREGDQHFLVTPVEKVGIVVDDAPFLAVEMKVTEG
                     DAGRVLEFRTNVDDWVAAGPGHALRFEPQPATGGLKPYLHVRRDLWAKVTRPLFYDLV
                     ALGEEREVGGKAMFGVMSGGEFFAMAEASAVREFA"
     gene            1895..2551
                     /locus_tag="VIY07_13485"
     CDS             1895..2551
                     /locus_tag="VIY07_13485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HEY6382803.1"
                     /translation="MQESATTALAAAEFFARVRRRLTLDVPPGLTDPGITPVRGDHDA
                     DPVMRKIAEVRPIRPAAVLVPIIDHPEPTVLLTQRAQHLPDHAGQVSFPGGKIDTGDI
                     APSASALREAQEEIGLDRGHVEPLGYLDLYMTTLGYRIVPLVARLRPGFKLRLNVAEV
                     DATFEVPLAFLMDQANVQRHSREWQGMTRHYYAITFGERYIWGVTAGILRNLYDRIYR
                     "
     gene            2589..2852
                     /locus_tag="VIY07_13490"
     CDS             2589..2852
                     /locus_tag="VIY07_13490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6111 family protein"
                     /protein_id="HEY6382804.1"
                     /translation="MIRPIFTEIALFLTPFVLYAVFLWATQAGVLDLKSWPMVRVATL
                     AIVALALVLGSFIYFAHFSGAPPGSTYVPAHLENGKFVPGTTK"
     gene            2956..4221
                     /locus_tag="VIY07_13495"
     CDS             2956..4221
                     /locus_tag="VIY07_13495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEY6382805.1"
                     /translation="MTDDGRTDLKIGDAWLTTGGLPRLLGVIDRDGEEARVVGGAVRN
                     ALIGMPTAEVDVATTAVPEEVVKRVTAAGFKPVPTGIEHGTVTVVIDKQPFEVTTLRR
                     DIETYGRHAKVEFGRDWRADAERRDFTINALSVTRDGTVYDYTGGVDDLNHRRVRFIG
                     DPAKRIAEDYLRILRFFRFHAAYGTSDHPDAAGLAACIAGRNGLDQLSRERVRMEILK
                     LVVAPHAVPTLISMTDAGLLLRVLGGVSYLGSFENMTKVEAAIGSEPNAVRRLGALAV
                     AVPEDADRLWQRLRLANSERDRLASMGEGWGRISPLYGEKAAKALLYRLRPQQFTDRV
                     LLGWARSQATAHDPEWHALAILPQRWTAPVFPLKAADFMKRGVLQGPALGAAIAAAEQ
                     AWVAAGFPGDQAALDAIAEEAVRAPTPQK"
     gene            4233..>4687
                     /locus_tag="VIY07_13500"
     CDS             4233..>4687
                     /locus_tag="VIY07_13500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEY6382806.1"
                     /translation="MSTNLFSGFADISLWQLIPVAVVALVASVVGGVSGYGTGALMPL
                     VLVPLVGAEPVVPIIAVSAMFTNSSRVFAFSKYADWRRTAIVLVAAVPTCVLGAWGYT
                     KLSSAGAALVIGSMLILSVPLRRLMRHQGVKIGDGGLALGSFGYGLVVGG"
BASE COUNT          807 a         1430 c         1536 g          914 t
ORIGIN      
        1 ttccaggatc agacgaggca tggcgtcggc aagcttgcgg gcgccgactg tcgcctgccg
       61 caccgtcctg gcttcgatgt cgttcggtct tgcctccgcc atcgtgacta tccgatgcgc
      121 gctttcagcc gccggatgac gttggggatg gtttcgcctt cggcgcgtgc ggcgaaggtg
      181 atggccattc gatgcttgag cacaggttcg gccagctcca gaacgtcttc gaccgagggc
      241 gcgaagcggc catcgagaag cgcgcgtgcg cgcaccgcca gcatgagcgc ctggctcgcg
      301 cgcgggccag ggccccagga gatcagtttg ccgatctcgc cgccttcggg tccggggcgc
      361 gccgagcgca cgagcgccag aattgcctcg accacggact cgccgaccgg tagacggcgg
      421 acgagccgtt gcgccgacag cagatcctcg gcggtcatcg ccggcttggc gcgcgactcc
      481 tcggcgcctg tcgtatcgaa caggattttg cgttccgcct cctgatcggg atagtcgaca
      541 tcgacttcca tgaggaagcg gtcgagctgc gcttcgggca gcggatatgt gccttcctgt
      601 tcaagcgggt tctgcgtcgc cagcacatgg aatggcttgg gcagatcgtg acgctgtccc
      661 gcgaccgtca catgctgctc ctgcatcgcc tgcagaagcg ccgattgagt ccgcggcgag
      721 gcgcggttga tctcgtcggc catcagcaac tgcgcgaaca ccggtccggc aatgaatcgg
      781 aagctgcgct ttccacccgg actctcttcc agcacttcgg tgccgagaat gtcggacggc
      841 atcaaatcag gagtgaactg gatgcggcgt gcgtcaagac ccagtacgat acccatggtc
      901 tctacgagct tggtcttggc aagccctggt acgccaatca gcagcgcgtg accaccggac
      961 agcaccgtga ccagcgcctg ctccaccacc acatcctgac cgaagatcac cgcgccgatc
     1021 gcagtctttg cagcgcggac gtgggcagcc gtagattccg ccgcccgaac gatcatgtct
     1081 tcgagttttt cgaggctttc gccgctagcc atttctcagt tcctttcact ttcgccctaa
     1141 gccgcacctc gcgctatgca acaaacgcac cacgcgccga gttgctgcgc cgttaagccg
     1201 aatctgcctc aatctatggt caagcttacg ctatcttcta ccgccggatc ggctgaatca
     1261 cgaagatgcg aacaggcggg cggccgccca attatcgaag gaaaacaatg gcgaaggcag
     1321 ggcagggcgg attggaaggg attgcggcag ggctgccccg cgaaaacaag gggctgccgc
     1381 ccgtagagcg ctggaatccg ccttattgcg gcgagatcga catgaggatc gctgcggacg
     1441 ggacctggtt ttatcagaag acgccgatcg gccgcccggc tttggtcaag ctgttcgctt
     1501 ccgtacttaa gcgggaaggc gaccagcatt tcctggttac gccggtggaa aaagttggaa
     1561 ttgtcgtcga cgatgcgccg tttcttgccg tcgaaatgaa agtcacggag ggcgatgccg
     1621 gacgcgttct cgaattccgg accaatgtgg acgattgggt cgcggcgggc cccggccatg
     1681 cgctgcgttt cgagccgcag ccggccaccg gcggcctcaa gccatacctc cacgtgcggc
     1741 gagacctgtg ggccaaagtg acgcgcccgc tgttctacga tcttgtcgca ctcggagaag
     1801 aacgtgaggt cggcggcaag gcaatgtttg gtgtcatgtc aggcggcgag ttctttgcca
     1861 tggcggaagc cagcgcagtg cgggagttcg cctgatgcag gaatccgcaa cgaccgctct
     1921 cgcagcggcg gaattcttcg cgcgcgtgcg ccgacggctc accctcgacg tgccgcctgg
     1981 tctcaccgat ccgggcataa caccggtgcg cggcgatcat gatgctgatc cggtgatgcg
     2041 caagattgcg gaggtgcgcc cgatccgtcc agcggctgtg ctggtgccga ttatcgacca
     2101 ccccgagccg accgtgctgc tgacgcagcg cgcccagcat ttgccggatc atgccggcca
     2161 ggtttcgttt cccggcggaa agatcgacac tggcgacatc gctccgtcgg cttcggcctt
     2221 gcgcgaagca caagaagaga tcggccttga tcgcggccat gtcgagccgc tgggttacct
     2281 cgatctctat atgaccacgc tcggttaccg gatcgtaccg ctggtcgccc gcctgcggcc
     2341 cgggttcaag ctcagactaa atgtcgcaga agtcgatgcc acgttcgagg tgcccctcgc
     2401 gtttctgatg gaccaggcga atgtgcagcg tcactcgcgc gagtggcagg gcatgacgcg
     2461 acattattat gcgatcactt ttggcgagcg ctacatctgg ggcgtcaccg ctggtatcct
     2521 gcgcaatctt tacgaccgga tttaccgatg atccgcccgc aaaaattgac gcagaggggt
     2581 gagtcacgat gatccgcccg atcttcaccg agattgccct gttcctgacg ccgttcgttc
     2641 tgtacgcggt gtttctgtgg gcgacgcagg cgggggtgct ggatctcaaa tcctggccaa
     2701 tggtccgcgt agcgacgctg gctatcgtcg cgctcgcgct tgtgctcgga agcttcattt
     2761 atttcgcgca tttttccgga gcgccgcccg gatcgactta tgtgccggca catttggaaa
     2821 atggcaaatt cgtgccgggg accacgaagt gagagaaata aagagtcgct cagcaaagca
     2881 cgccgtcgcc ctgaggtgcg aggggcgtaa gggcgccgcc atccttcgag ggcggccctt
     2941 ggtcgccacg tcaggatgac ggacgacggc cgcaccgatc tcaaaatcgg ggacgcctgg
     3001 cttaccaccg gcgggttgcc gcgattgctt ggcgtgatcg atcgcgatgg cgaggaggcg
     3061 cgcgtcgtcg gcggtgcagt gcgcaatgcg ctgatcggca tgccgaccgc ggaagttgac
     3121 gtcgccacca ccgccgttcc cgaagaggtc gtgaagcgcg tcaccgcagc cggcttcaag
     3181 ccggtaccga ccggcattga acatggcacc gtcacggttg tcatcgacaa gcagccgttc
     3241 gaagtgacca cgctgcgcag ggatatcgaa acctatggcc gccacgccaa ggtcgagttt
     3301 ggccgcgatt ggagagcgga cgccgagcgg cgggatttca cgatcaatgc gctgtcggtg
     3361 acgcgtgacg gcacggttta cgattacacc ggcggtgttg acgatctgaa ccatcgccgc
     3421 gtgcgcttca tcggcgatcc ggcaaaacgc atcgccgagg attatctacg catcctgcgc
     3481 tttttccgtt tccacgcagc ctatggcacc agcgatcacc cggatgcggc cgggctcgcc
     3541 gcatgtatcg ccggacgcaa cggcctcgac cagctctcgc gcgagcgcgt gcggatggag
     3601 attttgaaac tggtcgtcgc cccgcatgcg gtgcccacgc ttatctcgat gaccgatgcg
     3661 ggcctgctgc tgcgcgtgct cggcggggtc agctacctgg gcagctttga gaacatgacc
     3721 aaggtcgaag ctgcgattgg atcggagccg aacgcggtgc gccggcttgg cgcgcttgca
     3781 gtcgcagttc ccgaagatgc cgaccggctt tggcaaaggc tgcgactcgc caacagtgag
     3841 cgcgatcggc tggcatcgat gggagaggga tgggggcgca tctcgccgct atacggagag
     3901 aaagcggcga aggctttgct gtaccggctg cggccgcaac agttcaccga tcgcgtgttg
     3961 ctgggttggg cgcgttcgca ggccacggcg cacgatccgg agtggcacgc gcttgcgatt
     4021 ttgccgcagc gctggaccgc ccccgtcttt ccgctcaagg cagcggactt catgaagcgt
     4081 ggtgtgttgc aaggcccggc gctcggagcg gcaattgccg cggcggagca ggcctgggtc
     4141 gcggccggat ttccgggcga tcaggcggcg ctcgatgcga tcgcggagga ggcggtgcga
     4201 gcgccgacac cacaaaaata atgccttcat ttgtgagcac gaatcttttt tccggcttcg
     4261 ccgatatttc gttatggcag ttgatccctg tcgcggtcgt ggcgctggtc gcttcggttg
     4321 tcggcggggt gtcaggctat ggcaccggcg cgctgatgcc gctggtcctc gtgccgctgg
     4381 tcggcgccga accggtggtg ccgatcatcg ccgtgtcggc gatgttcacg aattcgagcc
     4441 gcgtgttcgc attttccaag tatgccgatt ggcggcgcac ggccatcgtg cttgttgctg
     4501 cggtgccgac ctgcgttctc ggtgcgtggg gctatacgaa gctcagcagc gcaggcgcgg
     4561 cgctggtcat tggcagcatg ctgatcctga gcgtgccgct gcggcggctg atgcgccacc
     4621 aaggcgtgaa aatcggcgat ggcgggctgg cgctcggttc attcgggtat ggcctggtcg
     4681 tgggggg
//
LOCUS       DATDHO010000698         3081 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_78797, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000698 DATDHO010000000
VERSION     DATDHO010000698.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3081)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3081)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3081
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_78797"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2947)
                     /locus_tag="VIY07_13505"
     CDS             complement(<1..2947)
                     /locus_tag="VIY07_13505"
                     /inference="COORDINATES: protein motif:HMM:TIGR03897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 lanthipeptide synthetase LanM family
                     protein"
                     /protein_id="HEY6382807.1"
                     /translation="MDVFHERLTLRAATIDELLSDDFEALPGQKSDADLAARRLAAWC
                     QSCASGDWSLFNQRLGRDGWTIDAVLKRFATVRRKASIPAPPWLADAIWIEAALQSPR
                     TSTDAGQSPAGSGPCAFEDLLMPVVHRAADLLWSSVDRRPIDNLTKPAHICLARSLLK
                     ELSDLSAPAIYEQFVKARTAAEMADASKSAPDKGTTLYDRFAADMSAGGFRNLFEAKP
                     VLLRLMAVVVRQWIETSRELVLRLDADLPAIRREILRSNTDSRVAWIDGDLSDPHNGG
                     RSVRIISFEDGLRVVYKPKDLRLDIAWHNLVQQLNGAGAPIELRAVRAIAPNGYGWTE
                     FVEHTEYTGTAGSKQFFRRAGAWLALFHCFVANDMHQENMIAAGDHPVPIDLETILQP
                     SEKHGTSDPESEAFDLATEKLANSVMMVGLLPAYGRSPDNSVFAMGGMTADWNSKIKI
                     QWDNINSDAMRPKKSKETGSTNPNLPRTDGQYARFADHVDDFVAGFADYARFLAAQGR
                     AGKWQELYDDFAGLPVRKVVRATRFYSMLLQRLRNCRTMDDGVVWSAQADFMARLAEW
                     DKDNDHLWPLQRAERSALIALNVPHFVTPSDGHEIRDTNGISVQTEAKPGLGRARARM
                     RDFDQHEIEWQIEVISENTRSLAKPPVLAANRGRQVTEVAAQPTTKIFITEADKIAEE
                     LSRYAIRRGPGAAWIGLDCLGDADVFQLVCLGPDLYNGVSGIALFLAGHARVTGRRSS
                     AELALAGLSYLRKNLKSRNAARMARSLGVGGATGLGSIVYSLAVTSKLLHRDDLLADA
                     YVASQLFTDELIAADRQLDAIGGCAGGILGLLRLYRDTHSAEVLNRAIRCGEHLLAHA
                     RLGPEGRRSWVGQGSGKHALNGMSHGAAGFAYALASLASASGREDFAQAASECIAFEN
                     SSYDAGRTNWPDLRTEGAPNWPCQWCHGATGIGLARVAMAKMGVRDSEGLTGDIENAL
                     EGTRKAWPGG"
BASE COUNT          622 a          964 c          877 g          618 t
ORIGIN      
        1 cgccacctgg ccaagccttc ctcgtgcctt caagcgcatt ttcaatatcg ccggtcagcc
       61 cttcggaatc tcttacgccc atttttgcca tggcgacccg cgcaagaccg atcccggtcg
      121 ctccatgaca ccactgacac ggccagttcg gggccccttc tgtgcgcagg tcgggccagt
      181 ttgttcggcc ggcatcgtaa ctcgaatttt caaaggcaat gcattcagag gcggcctgcg
      241 cgaagtcttc gcgtccgctg gctgacgcca acgaagcaag cgcataggca aaaccagcgg
      301 cgccgtgcga catgccgttc agcgcgtgtt tgcccgagcc ttgaccgacc cagctgcggc
      361 ggccttccgg cccaagcctg gcgtgcgcaa gcagatgctc tccacatctg atcgctcgat
      421 tgagtacttc ggcagagtgg gtgtcgcgat aaagacgaag cagtccgagt atgccgccgg
      481 cgcacccgcc aatcgcatcc agctgtctgt ccgccgcgat caattcgtcg gtgaacaatt
      541 gagacgcgac ataagcgtcc gcaagcagat catccctatg aagcaatttc gacgtgacgg
      601 cgaggctgta aacgatcgaa ccgagaccgg tcgcgccgcc aacgccgaga gagcgggcca
      661 ttcgtgctgc gttgcggctt ttcagattct ttcgcagata ggaaagcccg gccagcgcaa
      721 gctcggccga ggagcggcgg ccggtgacac gcgcgtgccc ggcgagaaac agcgcgattc
      781 ccgagactcc gttgtagagg tccggtccga ggcaaacgag ctgaaatacg tcggcatcgc
      841 caaggcagtc gagtccgatc cacgcggcgc ccggaccgcg gcgaattgca tagcgggaca
      901 gctcttcggc aatcttgtcg gcttccgtaa tgaagatttt cgttgtcggc tgggctgcga
      961 cctctgttac ttgtcgccct ctattcgctg ccaaaaccgg cggctttgcc agcgatcttg
     1021 tattctcgct gatcacctcg atctgccact caatttcatg ctgatcgaaa tcgcgcatgc
     1081 gtgcgcgcgc acggccaagc ccgggtttgg cctcggtttg aacggaaatt ccattcgtgt
     1141 cccgaatctc atgtccgtcg cttggcgtaa caaagtgcgg gacattcagc gcgataagcg
     1201 ctgagcgctc ggctcgctgg agaggccaaa ggtggtcgtt gtctttgtcc cactccgcca
     1261 gccgagccat gaaatccgct tgcgccgacc acaccacgcc gtcgtccatc gtacggcaat
     1321 tgcgcagccg ctgcaggagc attgaataga atcgcgtcgc gcgaacaacc ttgcggaccg
     1381 gaagtccggc aaaatcgtcg tacagctcct gccactttcc ggccctgccc tgcgccgcca
     1441 ggaacctggc gtagtcggca aagcccgcga cgaaatcatc gacgtggtcc gcaaacctcg
     1501 catattggcc atcggtacgc ggcaagttcg gattggtgct gcctgtctcc ttcgatttct
     1561 tcggccgcat ggcatcggaa tttatattgt cccactggat ctttattttt gaattccagt
     1621 ctgccgtcat tccgcccatg gcaaagacgc tgttgtcggg cgaccgcccg taggcgggaa
     1681 gcaagccgac catcatgacc gagttggcga gcttctctgt cgcgagatca aaggcctccg
     1741 actccggatc tgacgtgccg tgtttttcgg atggctggag gatcgtttcg agatcgatcg
     1801 gcaccggatg atcgccggcg gcgatcatgt tttcctggtg catgtcattc gctacaaagc
     1861 aatggaacag cgcaagccat gcgcccgcac gccggaagaa ctgtttgctc cctgccgtgc
     1921 cggtgtattc ggtgtgctct acaaactcgg tccaaccata gccattcggc gcaatcgcac
     1981 gcacggctcg gagctcaatc ggtgcgccag ccccgttcag ctgctgcaca aggttgtgcc
     2041 aggcgatgtc gagccggaga tccttcggct tgtaaacgac ccgcaggcca tcctcgaagc
     2101 tgatgatccg gaccgaacgc ccgccgttgt gcggatcgga aaggtctcca tcgatccagg
     2161 caacacggct gtcggtattc gaacgcaaga tttcccgtcg aatagccggc agatccgcgt
     2221 caaggcggag aacaagttcg cgcgacgtct cgatccactg ccggacaacg accgccatca
     2281 atcgcaaaag aacgggcttt gcttcaaaca ggttccgaaa tccgcctgcg ctcatgtcgg
     2341 ccgcgaaccg gtcgtaaagc gttgttcctt tgtcgggagc cgatttcgat gcatcggcca
     2401 tttcggccgc tgtgcgagcc ttgacaaatt gctcgtagat cgccggagcg gacaggtcgg
     2461 acaattcctt cagcaaggaa cgagcgaggc agatatgagc gggtttggtc agattatcta
     2521 ttggccgccg atccacgctc gaccacaaga gatcggcagc ccggtggacc accggcatga
     2581 gcagatcctc gaacgcacaa ggcccgctgc cggcaggcga ctggccagca tcggtgcttg
     2641 tccgtggact ctgcagcgcc gcctcgatcc agatggcgtc ggcgagccac ggcggcgcag
     2701 gaatagaggc tttgcggcgg accgtggcaa atcttttcag aacagcgtca atcgtccatc
     2761 catcccggcc aagtcgctgg ttaaacagcg accaatcgcc gctggcacat gactgacacc
     2821 aggcagccag acgacgggcc gccaaatcgg catcgctttt ttggcccggc aaggcctcaa
     2881 aatcatccga gaggagttcg tcgatggtcg ccgcccgaag ggtcaaccgc tcatggaaaa
     2941 catccatcaa tcactctggc tcctctgcgg cgattatact caaactcgta tcccctcatt
     3001 cgcttgtcac agactggctc gatggcgcct ggcgtgcagc caaaaacagg cgatgatcgg
     3061 gccgctttaa acctcttaca t
//
LOCUS       DATDHO010000699         2177 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_132818, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000699 DATDHO010000000
VERSION     DATDHO010000699.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2177
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_132818"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VIY07_13510"
     CDS             complement(<1..452)
                     /locus_tag="VIY07_13510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010682983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY6382808.1"
                     /translation="MSHHALDISLIVNGERVQERVDARKTLVDFLREDLLLTGSHVGC
                     EHGVCGACTVRVNGEIVRGCLMLAVQCDGAKVETIEGLSDSGEVADLQAAFEQRNALQ
                     CGYCTPGMLATAQDLLKRAKNVPSREQIREHISGNYCRCTGYHSIVDAV"
     gene            complement(449..1291)
                     /locus_tag="VIY07_13515"
     CDS             complement(449..1291)
                     /locus_tag="VIY07_13515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY6382809.1"
                     /translation="MKPAPFAYTKARTLKEAVALLAKHKDDARLLAGGQSLIATLNMR
                     LSAPELLIDINGIKGLDGIARKGKFVEIGALARHAQVERSDIVSRHAPLIALAMPHIG
                     HPAIRNRGTFGGSIAFADPAAELPACVLALGGEIDIAGPKGKRTVKADAFFKGLFETA
                     LRPQEMLTAVRVPAADKNTRVGFAELARRHGDYAIVGLAATARADGKGVADVRLAYFG
                     VGNTPVRARKAEAALTAGNIDAAVKALDLDPNDDVQATAKVKKHLAGVLLRRVAKQLL
                     EDRP"
     gene            1458..>2177
                     /locus_tag="VIY07_13520"
     CDS             1458..>2177
                     /locus_tag="VIY07_13520"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6382810.1"
                     /translation="MPKEFEGKVVVVSGGSRGIGKAIATAFAREGAQVVLAAASADNL
                     AAAAKSMAGGPAPMTVAGDLRTLAGCEQLFKAVNEKFKRCDILVNNAGATRGGNFFEL
                     PDEAFVDGFALKYFAAVRLSRLFWPLLKASHGSIINIIGAAARTPGPDFLVGGSVNAA
                     FANFAKGLAAIGNRDDVNVNVIHPGMVETDRVVTLFQQFAKANNTTPEEARKNSLAKS
                     GARRIGQPEDIAELVLFLARPQ"
BASE COUNT          387 a          673 c          693 g          424 t
ORIGIN      
        1 accgcatcga cgatggagtg gtagcccgtg cagcgacagt agttcccgga aatgtgctcg
       61 cggatttgtt cgcggcttgg aacatttttc gcccgcttga gcaggtcctg cgcggtcgcg
      121 agcatgccgg gcgtgcagta gccgcattgt aaagcgttgc gttgctcgaa tgctgcttgc
      181 aggtcggcga cttcgccgga atcggatagt ccctcgatcg tttcgacctt cgcgccgtcg
      241 cactgcaccg ccagcatcaa gcacccgcga acaatctcgc cgttcacacg cacggtgcag
      301 gcgccgcaga cgccgtgttc gcatccgaca tggctgccgg tcagcaaaag gtcctcgcgc
      361 aggaaatcga ccagtgtctt gcgtgcatcc acgcgctcct gcacgcgctc gccgtttaca
      421 atgagagaaa tatcgagggc gtgatggctc atggccgatc ctccagcagc tgtttcgcca
      481 cgcggcgaag cagcacgccg gccagatgct tcttgacctt cgcggttgcc tgcacatcgt
      541 cgttcggatc gagatcgagc gccttaactg ccgcgtcgat attgccggca gtgagcgcgg
      601 cctcggcttt cctggcgcgg acaggcgtgt ttccgacgcc gaagtaggcg agtcgcacat
      661 cggcaacgcc cttgccgtct gcgcgcgcgg tggcagccag tccgacgatc gcataatcgc
      721 cgtgtcggcg agccagttcg gcaaatccga cacgggtgtt cttgtcggcg gcgggaacgc
      781 gcacggcggt cagcatctcc tgcgggcgca gcgcagtttc aaacaggccc ttgaagaaag
      841 cgtccgcttt caccgtgcgt ttgcccttgg gtccggcaat gtcaatctcg ccgccaagcg
      901 ccaggacgca cgccggcaat tccgccgccg ggtcggcgaa agcgatggag ccgccaaacg
      961 tgccgcggtt gcggatggcg gggtgaccta tgtggggcat tgcgagcgcg atcagcggcg
     1021 cgtgcctgga aacgatgtcg gagcgttcga cctgggcgtg acgagccagt gcaccgattt
     1081 cgacgaactt gcctttccgg gcaatgccat cgagcccttt gatgccgttg atgtcgatca
     1141 gcagttccgg cgccgagagg cgcatattca gtgtcgcgat caggctctgc ccgccggcga
     1201 gcagccgcgc gtcgtccttg tgcttggcga gcagcgccac cgcttccttg agcgtccgtg
     1261 ccttcgtata ggcaaatggc gccggcttca cctgtcctcc cccttcgatg gcgcgtgatc
     1321 ctggcggaaa acccgtcccg ccttcgatcg cgctgtcgtt tttttcttat tgtgaccggg
     1381 aacgcggtca ggtcaatgcg ctcgccgact ggccgcgcgc cgcgtataaa gcctgcacaa
     1441 aatcaaggga cagacccgtg ccgaaggaat ttgaagggaa ggttgttgtc gttagcgggg
     1501 gcagccgcgg gataggcaag gcgattgcaa ccgccttcgc gcgcgaaggc gcgcaggtcg
     1561 ttttagcggc cgccagcgct gacaatcttg ccgccgcagc caagtcgatg gccggagggc
     1621 ctgccccaat gacggttgcc ggggatctga ggacgcttgc gggctgtgag cagctgttca
     1681 aggcggtcaa cgagaaattc aaacgctgcg atatcctcgt caacaatgca ggtgccacgc
     1741 gcggcggcaa ttttttcgag cttccggacg aggcatttgt cgatggattt gcgctgaagt
     1801 atttcgccgc ggttcggctg tcgcggttgt tctggccgtt gctcaaggca tcgcatggaa
     1861 gcatcatcaa catcataggg gcggcggccc gaacgccggg acctgatttc ctggtcggcg
     1921 gctcggtgaa cgccgccttt gcgaatttcg caaaggggct tgccgctatc ggcaatcgcg
     1981 acgacgtcaa cgtcaacgtc atccaccccg gcatggtgga gaccgaccgt gtcgtcacac
     2041 tgttccagca gtttgccaag gccaacaaca ccacgccgga ggaggcacgc aagaacagtc
     2101 tcgccaaaag cggcgcgcga cgcatcggcc agcctgaaga catcgcggag ctggtactgt
     2161 ttctggcgcg tccgcaa
//
LOCUS       DATDHO010000700         4533 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_430103, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000700 DATDHO010000000
VERSION     DATDHO010000700.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4533
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430103"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..332)
                     /locus_tag="VIY07_13525"
     CDS             complement(<1..332)
                     /locus_tag="VIY07_13525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP/pyruvate-binding domain-containing protein"
                     /protein_id="HEY6382811.1"
                     /translation="MAKRKRARVGAKRKKIPPRKAFRPRPKAAGRQSRGKWVYAFGDG
                     RAEGTASMRDLLGGKGAGLAEMANLGLPVPPGFTITTDVCTYYYAHDKQYPKDLSPQV
                     EKALARVGR"
     gene            complement(408..551)
                     /locus_tag="VIY07_13530"
     CDS             complement(408..551)
                     /locus_tag="VIY07_13530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3096 domain-containing protein"
                     /protein_id="HEY6382812.1"
                     /translation="MTISIAHLQPIVALIAGILILIIPRLLNIIVAVYLILVGLLGLG
                     LFR"
     gene            complement(617..2677)
                     /gene="glyS"
                     /locus_tag="VIY07_13535"
     CDS             complement(617..2677)
                     /gene="glyS"
                     /locus_tag="VIY07_13535"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEY6382813.1"
                     /translation="MPDLLLEFFSEEIPARMQPRAVEDLRKLVTDRLVASGLVYEGAK
                     AFATPRRLALSVHGVPARQPDIKEEKKGPRVGAPENAIAGFLKAAGLKSIKEAKVQPD
                     KKGDFYVAVIDRPGRPAIEVIAEVIPEVARTFPWPKSMRWGNGRFNWVRPLHSVVATF
                     GPETEEPEIVRFEIDGIASGDETRGHRFMASAPFKVRRFEDYVAKLEQAKVVLDPARR
                     ADTILADAKNLAFAQGFELVEDAGLLAEVTGLVEWPVTLIGSFDKAFLSIPDEVIRAT
                     IRNNQKCFVLRDPQTAKLINKFIVVANEEAADGGKAIIAGNERVIRARLSDAKFFYET
                     DLKRRLEDRLPKFEQIIFHEKLGTQAERIARLTSLAGQLAPVVDADKVKAERAAQLCK
                     VDLLTEVVGEFPELQGLMGRYYAEAQDEDEAVAHAIEDHYRPKGPDDLVPSDPVSIAV
                     ALADKIDTLVGFWVIDEKPTGSKDPYALRRAALGIIRIVIDNKLRLSLTDVFQKAVRN
                     FSAGSDLFSFFADRLKVQLREQGARHDLVDAVFSLERQDDLLMIVRRVEALGKFLDSD
                     DGKNLLAGYKRATNIIRIEEKKDNREYTGAPDAKRYQLTEEKALAEAIGVARKEALAA
                     IAREDFEAAMRAMARLRPRVDAFFDKVTVNVEDKALRENRLRLLNEIREATRAVADFS
                     KIEG"
     gene            complement(2812..3174)
                     /locus_tag="VIY07_13540"
     CDS             complement(2812..3174)
                     /locus_tag="VIY07_13540"
                     /inference="COORDINATES: protein motif:HMM:NF016370.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEY6382814.1"
                     /translation="MRRRDYRTAGARRLRQDMTDAERKLWRCLRLFSLNGTHFRCQAT
                     IGPFFADFACHHHRLIIEVDGGQHNDPRTLVRDEARARFLEHHGYRVLRFWNGDVLNN
                     IEGVCERVKSALQGAPHP"
     gene            complement(3326..4237)
                     /locus_tag="VIY07_13545"
     CDS             complement(3326..4237)
                     /locus_tag="VIY07_13545"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEY6382815.1"
                     /translation="MDPRRSFQGLILALQKYWADWGCVILQPYDMEVGAGTFHPATTL
                     RALGPKPWNAAYVQPSRRPQDGRYGENPNRLQHYYQFQVILKPSPADIQDLYLNSLKA
                     IGIDPKIHDIRFVEDDWESPTLGAWGLGWECWCDGMEVSQFTYFQQVAGFECAPVAGE
                     LTYGLERLAMYVQGVDNVFALNFNGRDDDKKVTYGDVFLQAEQEYSRHNFEFADTAML
                     FEQFKMAEAACRKYLEAGWAQGKKQRHLMALPAYDQCIKASHIFNLLDARGVISVTER
                     QSYILRVRELAKACGEAWLATEGGGAT"
BASE COUNT          874 a         1365 c         1336 g          958 t
ORIGIN      
        1 cggcccaccc gtgctaacgc tttctcgacc tgcgggctca ggtcttttgg atactgcttg
       61 tcgtgggcgt aatagtacgt gcacacgtcg gtcgtgatgg tgaagcccgg cgggaccgga
      121 agaccaagat tcgccatctc ggcgagcccg gcccccttgc cccccagcag atcgcgcatg
      181 gatgccgtgc cttcggcccg accgtcgccg aaggcgtaaa cccatttacc cctggattgc
      241 cggccggccg cctttggcct gggcctgaaa gccttccgcg gcggtatttt tttgcgtttg
      301 gcgccgacgc gcgcacgttt ccgtttggcc atagatcaag caacgttggt gggacagcgg
      361 gcctttaaaa gcaccgccga atagtccgac gcaagtccgg aattcgacta acggaaaagc
      421 ccgaggccca acaggccaac caggatgaga taaacggcca cgatgatgtt gagaaggcgc
      481 ggaataataa gaataagaat gcccgcaatc agcgcgacga tgggctgcaa atgcgcaata
      541 ctgatggtca tgatggactc ccctgttggc aggcaattca ctaaaacggc gagacgctga
      601 cggtagttcc ctttatttat ccctcgatct tggagaaatc ggcgacggcg cgcgtggctt
      661 cgcgaatctc attgagaagt cgcaagcggt tttctcgcag cgctttgtcc tcgacattga
      721 cggtgacctt gtcgaagaaa gcatcgacgc ggggacgaag cctggccatc gctcgcatgg
      781 cggcttcgaa atcctcccgg gcgatggcgg ccagggcctc tttccttgca acaccgatgg
      841 cctccgcgag cgccttttct tcggtcaatt gatagcgctt cgcatccggc gcgccggtat
      901 actcgcggtt gtcctttttc tcctcgatcc ggatgatgtt ggtcgcgcgc ttgtagccgg
      961 cgagcaggtt cttgccatcg tcgctgtcga gaaattttcc cagcgcttcg acgcgccgca
     1021 cgatcatcag cagatcgtcc tggcgttcca atgaaaacac agcatcgacg agatcgtggc
     1081 gggccccttg ctcgcgcagc tgcactttca ggcgatcggc gaaaaacgaa aacagatcac
     1141 tgccggcaga aaaattcctc acagccttct ggaaaacatc cgtgagcgac agccgcagct
     1201 tgttatcgat cactattctg ataatgccca aggctgcgcg tcgcaacgca taaggatcct
     1261 ttgatccggt cggcttctcg tcgatcaccc aaaagccgac cagagtgtcg atcttgtcgg
     1321 cgagtgctac ggcaatggaa accggatcgg agggaacgag atcgtcgggg cctttcggtc
     1381 tgtaatggtc ctcgatggcg tgcgcgaccg cctcatcctc gtcctgcgct tcggcgtagt
     1441 agcggcccat cagtccttgc agctcgggaa attcgccaac gacttcggtc agcaagtcca
     1501 ccttgcatag ttgcgcggcg cgctcagcct tgaccttgtc ggcatcgaca accggcgcca
     1561 gctggccggc gagcgacgta agccgggcga tgcgctctgc ctgtgtgccg agcttttcgt
     1621 ggaagatgat ctgctcgaac ttcggcaggc gatcctcgag ccgtctcttc aggtcggtct
     1681 cgtagaagaa cttcgcgtca gacagccgcg cgcggatcac ccgctcgttg ccggcgatga
     1741 tcgccttgcc gccgtcggcg gcttcttcgt tggccacaac aatgaatttg ttgatgagtt
     1801 tcgccgtctg cgggtcgcgg agcacaaagc atttctgatt gttgcggatg gtggcgcgga
     1861 tgacttcgtc ggggatcgac aaaaatgcct tgtcgaagct gccgatcagg gtcaccggcc
     1921 attcgacgag gccagtgact tcggccagca ggcccgcgtc ctcgaccagt tcgaagccct
     1981 gcgcaaaggc gaggttcttg gcgtctgcaa gtatcgtgtc ggcgcggcgc gccggatcga
     2041 gcacgacctt cgcttgttcg agcttggcga cgtagtcctc gaagcggcgc accttgaatg
     2101 gtgccgaagc catgaagcgg tgtccgcgcg tttcgtcgcc cgaagcgatg ccatcgattt
     2161 caaatcgcac gatctcgggt tcttccgtct caggtccgaa cgtcgcgacg acggaatgga
     2221 gcggccgcac ccaattgaat cggccgtttc cccatcgcat cgatttcggc cacgggaatg
     2281 tgcgcgcgac ctcaggaatg acttcggcga tcacctcgat tgccggacga cctggcctgt
     2341 cgatgaccgc gacgtagaaa tcgcccttct tgtccggctg gactttggct tccttaattg
     2401 atttgagacc cgcggccttc aggaatccgg caatcgcatt ctcgggtgcg ccgacgcgcg
     2461 ggcccttctt ctcttccttg atgtccggct gacgcgcagg cacgccgtgc accgacaggg
     2521 ccagccgccg tggcgtggca aaggctttgg cgccctcgta gacgagaccc gacgccacca
     2581 gccggtcggt gaccagcttg cgcagatcct cgaccgcgcg gggctgcatg cgcgcgggga
     2641 tttcctcgga gaaaaattcg agcagaagat cgggcattgc ggcctggata agaatggatc
     2701 gggcggcgtt tgcctagcaa ggagacccgc ggctgtcacc ttctggcagc aagttgtaca
     2761 tctccgggcg cagcatgccg ttcccctccc cccgcttgcg gtggggaggg gttaggggtg
     2821 gggggctccc tgcaaagccg atttcactct ctcgcatacg ccttcaatgt tgttaaggac
     2881 gtcaccattc cagaacctta gaacacgata gccatgatgt tctaagaacc tggctcgtgc
     2941 ttcatctcgc accagagtcc gtggatcgtt gtgctgtccg ccatcgactt caatgatcaa
     3001 gcggtgatga tgacatgcaa agtccgcgaa gaatggtcca atcgtggcct ggcaccgaaa
     3061 gtgcgtgccg ttcaatgaaa aaagacgaag gcagcgccac agttttcgtt ctgcatcagt
     3121 catgtcttga cgtagccgac gtgcaccggc ggttcgataa tcgcgtcttc gcatagtgcg
     3181 cttcgccccc cacccccgac cccttccctc cgcaagagcg gggggagggg tgaaccggca
     3241 agatcgataa agcccattaa ggggaacgga acattgcgag ggcaattgta caatcgctct
     3301 tacggctgac acgccgagag gacgatcacg tcgccccgcc gccctccgtg gccagccagg
     3361 cctcgccgca tgcttttgcc agttcgcgca cgcgcaggat gtagctctgc cgctcggtga
     3421 ccgagatcac gccgcgcgca tccagcagat tgaatatgtg gcttgccttg atgcactggt
     3481 cgtaggcggg caaggccatc aggtgacgct gcttcttgcc ctgggcccag ccggcttcga
     3541 ggtactttcg acaagccgct tccgccatct tgaactgttc gaacagcatt gccgtgtcgg
     3601 cgaattcaaa attgtgccgc gaatattcct gctccgcctg caaaaatacg tcgccatacg
     3661 tcaccttctt gtcgtcgtcg cggccgttga agttgagcgc gaatacgtta tcgacgccct
     3721 gcacatacat cgccaggcgc tcgagcccgt aagtgagctc gcccgcaacg ggcgcgcatt
     3781 caaatccggc gacctgctga aagtacgtga attgggatac ttccatcccg tcgcaccaac
     3841 actcccagcc tagcccccac gcgccgagcg tcgggctttc ccagtcgtct tcgacaaagc
     3901 ggatgtcgtg aattttcgga tcgatgccga tcgccttgag agaattcagg tagagatcct
     3961 gaatgtcagc cggagatggc ttcaggatca cctggaactg gtagtagtgc tgcaaccggt
     4021 ttgggttttc gccatagcga ccgtcctggg gccggcgcga gggctgcacg taggcggcgt
     4081 tccatggctt cggcccaagc gcgcgcagcg tggttgccgg gtgaaaggtc cccgctccca
     4141 cctccatgtc gtacggttgc aagattacgc agccccaatc cgcccagtac ttctgcagcg
     4201 caaggatcag gccctggaac gatctccttg gatccaggct gtcctgatgc atgcggtcgc
     4261 tggcgcgaag tttggcttca gccatcggat agatactgat tcttaagcac gggaatagat
     4321 ttgaccctag aggcgagccc aaaaggggtc aagccgagcc gcatttacgg gctgttgaac
     4381 cgcggctgat atccccgcga ttgatcaaag aagcacggtc gcgtttgggg aaatcgatgc
     4441 tttcttttca gttgatgggg tgggtcctga tcctgctgtt cttcggcgca ttgattggcg
     4501 gccacaagaa cgtggccgac cgctgaaagc cgc
//
LOCUS       DATDHO010000701         2416 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_281971, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000701 DATDHO010000000
VERSION     DATDHO010000701.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2416)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2416)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2416
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_281971"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            11..727
                     /gene="ubiE"
                     /locus_tag="VIY07_13550"
     CDS             11..727
                     /gene="ubiE"
                     /locus_tag="VIY07_13550"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEY6382816.1"
                     /translation="MLEDKQGRVNDVFHSVSRRYDLMNDLMSGGLHRAWKDVLVSAVN
                     PPRSERHFAVLDLAGGTGDIAFRILRAGGAGTRVTVCDINADMLDVGRDRASERSFAG
                     SVTFVQGNAEDLAYADRSFDCVTIAFGIRNVPRIERALAEAYRVLKTGGRFLCLEFSA
                     VDVPGLDALYELYSFHVIPRIGGVVTGDHQAYQYLVESIRKFPRPRRFARMIEGAGFR
                     RVSFTTMTGGMVALHSGWRL"
     gene            724..2295
                     /gene="ubiB"
                     /locus_tag="VIY07_13555"
     CDS             724..2295
                     /gene="ubiB"
                     /locus_tag="VIY07_13555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenylphenol 6-hydroxylase"
                     /protein_id="HEY6382817.1"
                     /translation="MIAGVFHLVRLARAGFVFAREGVFALVDTRPLPWPARSGVAIAR
                     LLERPGTKSGESRLAAALTRLGPTYVKLGQFLATRPDVVGPVIAHDLESLQDKMAPFP
                     QTEAEAAITAAFDKPLSKVYASFGPAVAAASIAQVHRAEIEAGGSRKPVAVKVLRPGI
                     EHRFRSDLDSFFFAARLAESLSAEGRRLRLVEVVATLARSVAIEMDFRLEAAAASEMA
                     ENTREDTDFRVPQVDWDRTAREVLTLEWIDGIRLSDHGALQAKGFNLPELGRKVIQSF
                     LRHALRDGFFHADMHPGNLFVDDTGRLVAVDFGIMGRLGPKERRFLAEILFGFITRDY
                     HRTAQIHFDAGYVPRHHSVESFAQAIRAIGEPIHNRTAEDISMAKLLMLLFEVTGLFD
                     MRTRPELLLLQKTMVVVEGVARSLDPKLDMWSTADPVVREWITRHLGPIGRFEDAVEG
                     AGEVGRFLGQTPALLTRAGTLLDQLDDITRDGLVLSPETVSAIGAAEARRNRWTTIAL
                     WVIAALLLWVVWLIA"
BASE COUNT          410 a          728 c          776 g          502 t
ORIGIN      
        1 cgagagcgtc ctgcttgagg acaagcaggg gcgagtgaac gacgtatttc attcggtttc
       61 ccggcgatac gacctgatga acgacctcat gtccggcggg ctgcaccgcg catggaagga
      121 tgtgctggtg tcggcggtca accctccacg gagtgaacgc cattttgcgg tgctcgacct
      181 ggccggcggc acgggagaca ttgcgttccg cattttgcgg gctggtggcg cgggcacacg
      241 cgtgacggtc tgcgacatca atgccgacat gcttgacgtg gggcgagacc gcgcctcgga
      301 acgaagtttt gcaggcagcg tcaccttcgt gcaaggcaat gccgaggatc ttgcctatgc
      361 cgatcgcagc ttcgactgcg tgacgatcgc ttttggcatt cgcaacgtgc cgcgcatcga
      421 acgcgcgctt gccgaggcct accgcgtcct aaagactggc ggccgattcc tgtgcctgga
      481 attttccgcg gtcgacgtgc ctgggttgga tgcgctctac gaactttatt ccttccatgt
      541 gatcccgagg attggcggcg tggtgaccgg cgatcatcag gcctaccagt atttggtcga
      601 atcgatccgc aagtttccca ggcccaggcg atttgcacgc atgattgaag gcgccggttt
      661 ccgccgcgtt tcgttcacaa cgatgaccgg cggcatggtg gcgctccact cgggctggcg
      721 attgtgatcg ctggagtttt tcatctcgtc cgccttgctc gcgccggctt cgtgtttgcg
      781 cgcgaaggcg tctttgcgct ggtcgatacg cgccccttgc cgtggccggc caggagtggc
      841 gtcgcgattg cgcggctgct tgagcgacct ggcacaaaaa gcggtgaaag ccggctcgcg
      901 gctgccctga cgagactggg ccctacctat gtcaagctcg gccagtttct cgcgacacgg
      961 ccggacgtcg tcggccccgt gatcgcgcac gacctcgaaa gtctgcagga caagatggcg
     1021 ccgttcccgc aaaccgaagc ggaggcggcc ataacggcgg cgttcgataa acctctctcg
     1081 aaggtctatg cgagcttcgg accggcggtc gcggcggcct cgatcgcgca ggtgcatcgc
     1141 gccgagattg aggccggcgg ttcgcgcaag ccggtagccg tgaaagtcct gcggccggga
     1201 atcgaacatc gcttcagatc agatcttgat tcttttttct ttgcggctcg gctggcggaa
     1261 tctctttcgg cagaagggcg gcggctgcga ctggtcgagg tcgtggccac gcttgcccgt
     1321 tctgtggcga tcgaaatgga ctttcggctt gaagccgcgg cggcttccga gatggctgag
     1381 aacacgcgcg aggataccga ttttcgcgtg ccgcaggtcg actgggaccg cacggcgcgc
     1441 gaagtgctca cgctggaatg gatcgatggc atccggctca gtgatcacgg cgcgctgcaa
     1501 gcaaaaggct tcaatctgcc ggaacttgga cgcaaggtga ttcagagctt cttgcgccac
     1561 gcattgcgcg acggcttctt tcatgccgac atgcaccccg gcaatctgtt cgtcgacgac
     1621 accggccggc tggtcgcggt cgatttcggc attatgggtc gcctcgggcc gaaggaacga
     1681 cgcttcctcg ccgaaattct gtttggcttc atcacgcgcg actaccaccg cacggcgcag
     1741 atccatttcg atgcgggcta cgtaccccgg catcactcag tggaaagttt cgcgcaggca
     1801 atccgcgcca tcggcgagcc gattcacaat cgcaccgccg aagatatctc gatggcaaag
     1861 ctcttgatgc tgctgttcga ggtcaccggt ctcttcgaca tgcgcacgcg ccctgaactg
     1921 ctgctcctgc aaaagacaat ggtcgttgtc gaaggcgtcg cgcggtcgct tgatcccaag
     1981 cttgacatgt ggagcacggc ggaccctgtc gtccgcgagt ggataacgcg ccatctcggt
     2041 cctatcgggc ggtttgagga tgcggttgag ggagccggcg aagtcggccg tttcctcggc
     2101 cagacgcctg ctttgctcac gcgcgccggc acgctgctcg atcagctgga cgacattacg
     2161 cgcgatggtc tcgtgctttc ccccgaaacc gtttccgcca tcggtgcggc ggaagcgcgc
     2221 cgcaaccgct ggaccacaat cgcgctgtgg gtgattgcgg cgctgctgct ctgggtggtg
     2281 tggctgatcg cctgacctga gaaagaagcg agccaggcat gcgcctcggc gcagcttccc
     2341 caccttgtgg cagtaggacg ccagcggatg gaaatagagc ttgagcgtca tgtcgtggtc
     2401 cttacttgtc ctgaac
//
LOCUS       DATDHO010000702         6884 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_475411, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000702 DATDHO010000000
VERSION     DATDHO010000702.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6884)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6884)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6884
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475411"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(85..939)
                     /locus_tag="VIY07_13560"
     CDS             complement(85..939)
                     /locus_tag="VIY07_13560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01459 family HAD-type hydrolase"
                     /protein_id="HEY6382818.1"
                     /translation="MPLLPHFSALAREYDVVLSDVWGVIHNGIAAHLHACDALVRMRA
                     QGGIVILVTNAPRPNEVVARQLERLHVPREMYDAIVSSGDVTRGVITQRRGQSLYHLG
                     PERDRSIFTGLDMRLAPLETADYVVCSGLEDDETETPDDYRSRLEFMLSRNLFMVCGN
                     PDVVVERGSTLVYCAGAIADLYARMGGEVLYAGKPYPPIYDMALAKAESAGNRKIALS
                     RVLAIGDSVRTDLKGARTMGLDFLFVTSGIHAEELGSREELDHSALTATFEAAGGAPK
                     AVIRELRW"
     gene            complement(968..2308)
                     /locus_tag="VIY07_13565"
     CDS             complement(968..2308)
                     /locus_tag="VIY07_13565"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY6382819.1"
                     /translation="MRRISAIFIAACVILIAASIGAVLYLGFNVDASTSAIVSLAALT
                     GMALFNSVSNRLRDRTDLGDQIADLSRGTADLARQVAEIARRLNAAEIKLASPTQRAR
                     AANDPLAAEIGELGGLVRQVAETVASHAAALQKQGALSSRPAPAGQTNVRPAENAPTG
                     SENEISAGTTRFRGLSRESIADLISKAIDANRVDLYLQPIVTLPQRKVRYYEALSRLR
                     TEDGEVVPAIDFIDIAENIGLMPKLDNLAVFRCVQVTRRLLLKSRDVGVFCNLSAATL
                     TDGLMFRQFLDFMDANRALAASLMFEFTQAAHRSFGPIEHESLAALAERGFRFSMDHV
                     TDLHMEPNELANGSFRFLKVPARLLLNKAAATHTDIDPEDLADLLARSGIDLIAERIE
                     TETTVVDLLDYDVRFGQGFLFSPPRPVRAEALQGTGEAGKPDASENPGVLLAAS"
     gene            2470..4038
                     /locus_tag="VIY07_13570"
     CDS             2470..4038
                     /locus_tag="VIY07_13570"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEY6382820.1"
                     /translation="MWTAKPMAPAPHVFAVLTRIAASPAQALAAILLLHALVWTALPT
                     LLYPNLPLDLIEALTYGREWQLGYDKLPPLPWWLVEIVYRAVGRDFAYYLLSQLAVVA
                     ALWLVWLTAIPLAGRRGALVAALIADGLHYLNYTSVKFNHDVVQLPLWALAGFAFHRA
                     LRGGWLGHWLLLGVAVGMALWAKYFVVVLAAPLALFIFFDREARKTLATPGPHVAAAM
                     ALITAAPHIVWLVQNDFLPFAYAEHRALPSRGLIDHLWHPLEFAHYQFLALLPSLLIA
                     LPLFYPRQRKDTPAKAGPDAFDLRIITLLAWGPVASVLALSAISGRGTVPMWSCPIWL
                     FLGLWLVLVARSSLDDRRLFFVVATWAALFAGYALGFFVNYAVMPYYDHRYRANFFPG
                     RDLGREISQRYQAATGEPISYVIGRMWDGGNVAHYSPGRPRVLIDGKPERAPWIDLED
                     LKAKGAVVVFWQDDLHAMPPEFKTIADGAVVQPPIELRYLRADLRGDPIVRVGWAILY
                     PKSGSAAEPVKRPP"
     gene            complement(4022..5359)
                     /locus_tag="VIY07_13575"
     CDS             complement(4022..5359)
                     /locus_tag="VIY07_13575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEY6382821.1"
                     /translation="MTQAQAKIAIPNDLEPYWMPFTANRGFKRRPRLIVGAKDMHYIA
                     SDGRKLIDGSAGLWCTNAGHNREPIVTAIQREAATLDYAPAFQFSHPKAFELASRIAA
                     LAPGDLDHVFFCNSGSEAVDTALKIALAYHNVRGNASRVRLIGRERGYHGVGFGGIAV
                     GGIVNNRKQFGALFAGVDHLQTTYNREKQAFSIGEPEWGAHLADDLDRLVALHDASTI
                     AAVIVEPVAASTGVLPPPQGYLERLRAICDKHGILLIFDEVITGYGRLGHAFAAERYG
                     VVPDMITFAKGITSGSVPMGGVIVRKGIYDAFMKGPEHVIELFHGYTYSAHPLACAAG
                     LATLDVYREERLFERARKLEEAWARAAMGLKGLPNVLDIRPVGLMVGIDLASRPDAVG
                     KRGMDALEMGFFENDFAFRAVGDTLALSPPLIVSENQIGEIFDKLARIIKAVA"
     gene            5508..>6884
                     /gene="hisS"
                     /locus_tag="VIY07_13580"
     CDS             5508..>6884
                     /gene="hisS"
                     /locus_tag="VIY07_13580"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEY6382822.1"
                     /translation="MADKPNKPKKIKARLPRGLADRGPAEIEATRVMMEAIRLVFERY
                     GFEPVETPAIEYTDVLGKFLPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAEN
                     FQNLAMPYRSYRYGWVFRNEKPGPGRYRQFMQFDADTVGAASMAADAEMCMLAADTME
                     ALGIPRGSYVVKVNNRKILDAAMDALEIPAEKRLTTMRAVDKLDRLGIEGVRMLLGKG
                     RKDESGDFTKGAELTDSQIAGIVAAITGGAPKTAAPTSAGEQELSEIAALVRAAGYDD
                     RIRIDKTVVRGLEYYTGPVYEVELTFEIKDEKGRPVRFGSVGGGGRYDGLVSRFRGEP
                     APATGFSIGVSRLQAALAHLGKISEKPVPGPVVVTVFDRDRIADYQRMVSALRDANIR
                     AELYLGNPKNNLGTQLKYADKRRAPCAVIQGGNEKARGEVQIKDLILGATLAGTKDRE
                     EYLKKQAEA"
BASE COUNT         1338 a         2093 c         2092 g         1361 t
ORIGIN      
        1 aagccgttca acgcgcagac gctcaagaac aagatcgacg ccgtgttcgg cgaagagcaa
       61 gtcccagctc cggcagcctg agcactacca ccgcaactca cgtattactg cctttggcgc
      121 gccaccagcg gcctcgaacg tcgccgtcaa agcggaatgg tccagttcct cacgactgcc
      181 caattcctcg gcatgaatgc ctgaggtcac aaaaaggaaa tcgagcccca tcgtgcgggc
      241 acccttgagg tccgtgcgca ccgagtcgcc aatcgccagc acccggctga gtgcaatctt
      301 gcggttccct gcgctttccg ccttcgccag cgccatgtcg tagatcggcg gataaggttt
      361 tccggcgtag aggacttcgc cacccatccg cgcgtacaaa tcagcgatag ccccggcgca
      421 atagaccagc gtcgacccgc gctccacgac cacgtcggga ttgccgcaca ccatgaacag
      481 attgcgggac agcatgaact ccagccgaga gcggtaatcg tcgggggttt ctgtttcgtc
      541 gtcctcgaga cccgaacaga cgacgtagtc ggctgtttcc aaaggcgcca aacgcatgtc
      601 gaggccggtg aatatcgagc ggtcgcgctc aggaccaaga tggtacagcg actgaccgcg
      661 ccgctgcgtg atcacgccgc gggtgacgtc gccggatgaa acaatcgcgt catacatctc
      721 tcgtggaaca tgcaagcgct caagctggcg cgccactacc tcgttcggcc gcggtgcgtt
      781 ggtgaccagt atcacgatgc cgccttgggc ccgcatgcgc acgagtgcgt cgcaggcatg
      841 cagatgtgcg gcaatgccgt tgtgaatgac gccccagacg tccgaaagca ccacatcgta
      901 ctcgcgcgca agcgccgaga agtgcgggag cagtggcaag gcggcgctca aggggggacc
      961 gaactggtca gctggcggcc agcagaacgc ccggattctc gctcgcatcc ggctttccgg
     1021 cctcacccgt gccctgcagc gcttccgccc gtaccggtct gggtggagag aacaggaaac
     1081 cttgtccgaa acgaacgtca taatcgagaa ggtcgacgac ggtcgtctca gtttcgatcc
     1141 gttcggcgat gagatcgatg cctgagcgcg cgagcaggtc ggcaagatcc tcggggtcga
     1201 tatcggtgtg cgtggcggca gccttgttaa gaagcaacct tgccggcact ttcagaaaac
     1261 gaaacgaccc gtttgcgagc tcattgggtt ccatgtgcag gtcggtgaca tgatccatcg
     1321 aaaaacggaa gccacgctcg gccagggctg caaggctctc atgttcgatc ggtccgaagc
     1381 tgcgatgtgc cgcttgcgtg aattcgaaca tcaatgaagc tgcgagggcg cggtttgcgt
     1441 ccatgaaatc gaggaattgc cggaacatca gcccatccgt cagcgtggcg gcactgagat
     1501 tgcagaaaac gccgacatcg cggcttttca agagcaggcg gcgagtgacc tgcacgcaac
     1561 gaaacaccgc cagattgtcg agcttcggca tcaggccgat gttttcggcg atatcgatga
     1621 agtcgatggc cggaacgacc tcaccgtctt ccgtgcgcaa gcgcgacaac gcctcgtagt
     1681 agcgcacctt gcgctgcggg agtgtcacga tgggctgcag atagaggtca acgcggttcg
     1741 cgtcgatggc tttggagatc aggtccgcga tgctctcgcg cgaaaggccg cggaatcgcg
     1801 tggtccctgc agatatctcg ttctcgctgc cggtgggcgc gttttcggcc ggccgcacgt
     1861 tggtctgacc tgcaggagcg ggccgactcg acaatgcacc ctgcttttgc aaagcagccg
     1921 cgtgcgaggc gaccgtttcg gcgacctgtc tcaccagtcc gccaagttca ccgatttcgg
     1981 cggccagagg gtcgtttgcc gctcgcgctc gctgtgtcgg ggatgccagt ttgatttccg
     2041 ccgcgttgag acgacgggca atctccgcaa cctggcgagc gagatcggcc gtgccccgcg
     2101 acaaatcagc gatctggtcg ccaagatcgg ttcggtcacg cagacgattg ctgaccgagt
     2161 tgaaaagcgc catgcccgtc aaggcggcca gcgacacaat tgccgaggtg ctcgcatcga
     2221 cgttgaagcc gagatagagc accgctccga tcgaggcggc gataagaatg acgcaggccg
     2281 caatgaagat agcgctgata cgacgcatac gatttatcct gggccgaccg aagtggcctg
     2341 cgcaatgccg tttttggcgt ctgattcgcc tagctggata ccaatgtcca caaggctgtg
     2401 gctccgcgca actcgaagta ctgctatggt agcgtgaaac cgctcgttat tcgcaggaac
     2461 ttatatttta tgtggaccgc aaagccgatg gcgccggcgc cccatgtttt tgccgtgttg
     2521 acccggatcg ccgcatcccc ggcgcaggct ttggctgcca tcctgctgct ccacgccctg
     2581 gtgtggaccg cccttcccac gctgctttat cccaatctgc cgctcgacct catcgaggcg
     2641 ctgacctacg gccgagaatg gcagctcggt tatgacaaac tgccaccctt gccctggtgg
     2701 ttggtagaaa ttgtctaccg cgcggttggt cgcgattttg cctactacct tctgtcgcag
     2761 ctggccgtcg tcgcagcact gtggctggtc tggctgaccg cgatcccgct tgccggccgg
     2821 cgcggcgcct tggtggcagc actcattgcc gacggcctgc actatctcaa ctatacgtcc
     2881 gtcaagttca atcatgacgt cgttcagctg cctttatggg cattggctgg atttgccttt
     2941 caccgcgcgc tgcgaggcgg atggctcggc cattggctgc tgctcggtgt cgcggttgga
     3001 atggcccttt gggcgaaata tttcgtggtc gtgctggccg cgccgctcgc attgttcatc
     3061 ttcttcgatc gcgaggctcg caagacgctt gcaactccgg gtcctcacgt ggcggctgca
     3121 atggccttga tcacagcggc gcctcatatc gtttggctcg tacagaacga ctttctgccc
     3181 tttgcctatg ctgaacaccg ggctctgcct tcgcgcggac tgatcgatca tttatggcac
     3241 ccgcttgaat ttgctcatta tcaatttttg gccctcctgc cgtcgctgct gatcgcgcta
     3301 ccgctgtttt atccgcgcca gcgcaaagat acgcctgcaa aagcgggccc cgatgctttc
     3361 gatctccgca tcatcacgct gctcgcctgg ggccccgtag cgagcgtcct cgcactctcg
     3421 gcgataagcg gccgcggtac agtgccgatg tggagctgtc cgatttggct gtttctcggg
     3481 ctttggctgg tgctggttgc gcgatcgtcg ctcgacgaca gacggctgtt cttcgtcgtc
     3541 gccacatggg cggccctgtt cgcaggttac gcgctcggct ttttcgtgaa ctacgcggtg
     3601 atgccgtact acgatcatcg ttatcgggcc aatttttttc ctggaagaga tctcggccgc
     3661 gagatatcgc agcgctacca ggcggcaaca ggagagccga tctcctacgt catcggcaga
     3721 atgtgggatg gcggcaatgt tgcgcactat tccccaggcc ggccacgcgt tctcatcgat
     3781 ggcaagccgg aacgtgcccc gtggatcgac cttgaagatc taaaggcgaa aggcgctgtc
     3841 gtcgtgttct ggcaagatga cctgcacgcc atgccgccag aattcaagac catcgccgac
     3901 ggcgccgtcg tccagccgcc aatcgaactg cgctacctgc gcgccgatct ccgcggcgac
     3961 ccgatcgtgc gtgtcggatg ggccatcctt tacccgaagt cgggttccgc ggccgaaccg
     4021 gtcaagcgac cgccttgatg atgcgggcga gcttgtcgaa tatctcgcca atctgatttt
     4081 cgctcacgat cagcggcgga ctgagcgcca gcgtgtcgcc gacggcgcga aaggcaaaat
     4141 cattttcgaa gaagcccatt tcaagggcat ccatgccgcg ttttccgacg gcgtcgggcc
     4201 tgctggccag atcgatgccc accatgagcc ccacgggccg gatgtcgagc acgtttggca
     4261 agcctttgag gcccatcgct gcgcgggccc aggcctcctc gagctttcgc gcgcgctcga
     4321 acagacgctc ctcgcggtag acatcgagcg ttgcaaggcc tgcggcacag gccaggggat
     4381 gcgccgaata tgtgtaaccg tgaaaaagct cgatgacgtg ctcgggccct ttcatgaaag
     4441 cgtcgtagat tcccttgcgc acgatcaccc cgcccatcgg cacggaaccg gaggtgattc
     4501 ccttggcgaa ggtgatcatg tcgggaacga cgccatagcg ctcggctgca aacgcatggc
     4561 caagccggcc gtatcccgtg atgacttcgt cgaagatcaa cagaatgccg tgcttgtcgc
     4621 aaattgcgcg caagcgctcg aggtagcctt ggggcggagg gagaacgccc gtcgaagcgg
     4681 caaccggctc aacgataact gccgcaatcg ttgaagcatc gtgcaaggcc accagccgat
     4741 ccagatcatc ggcgagatgg gcgccccatt ccggttcgcc gatgctgaag gcctgcttct
     4801 cgcgattata agttgtttgc aggtgatcga cgccggcaaa cagcgcgcca aactgcttgc
     4861 ggttgttgac gatgccaccg acggcaatgc cgccgaaacc gacgccgtga tagccgcgct
     4921 cgcggccgat caggcgcacg cgcgaggcgt tgccacggac attatgatag gccagcgcga
     4981 tcttgagcgc cgtatcgacc gcttccgaac ctgaattgca gaaaaacacg tgatcgagat
     5041 cgcccggcgc cagcgccgca atgcggctcg caagctcgaa tgccttggga tggctgaact
     5101 gaaacgccgg cgcgtagtcg agggtcgcgg cttcgcgctg gattgccgtg acgatcggct
     5161 cgcggttatg ccctgcattg gtgcaccata gtcccgcgga accgtcgatc aacttacgcc
     5221 cgtcgctggc gatgtaatgc atgtcctttg cgccaacgat cagtcgcggc cgccttttaa
     5281 aaccgcggtt ggcggtgaag ggcatccaat agggctcgag atcgttggga attgcgattt
     5341 ttgcttgtgc ctgggtcatg acctgcaccg tccgcggtcg atttgcccgg cttgggacgc
     5401 cgggcatcca tgccttctag cccttaccca ttacgaggtg gatggcaagc ccggtcacgc
     5461 acttttacaa cgttgccgta gcgtcactgt ctgatatgta acggcaaatg gccgacaaac
     5521 cgaacaagcc gaagaagatc aaggcgcgtc ttccgcgcgg gctcgccgat cgcggacctg
     5581 cggaaatcga ggctacccgc gtcatgatgg aagcgatccg cctggtattc gagcgctacg
     5641 gctttgagcc ggtggaaacg cccgccatcg aatacaccga tgttctgggc aagttcctgc
     5701 ctgaccaaga ccggccgaac gagggtgttt tttctttcca ggatgacgac gagcaatggc
     5761 tgtcgttgcg gtatgatctc acggcgccgc tcgcgcgtta cgtggcggaa aatttccaga
     5821 acctggcaat gccgtaccgc agctatcgtt atggttgggt attccgcaac gagaaacccg
     5881 gacccgggcg atatcgccag ttcatgcagt tcgatgcgga tactgttggc gccgcgtcca
     5941 tggccgccga cgcagagatg tgcatgctcg cggccgacac gatggaagcg ctggggatcc
     6001 cgcgcggcag ctacgtcgtc aaggtcaaca accgcaagat tttggacgcg gcgatggatg
     6061 ccctggaaat tcccgccgag aaacgcctca ccacaatgcg ggctgtcgat aagctggatc
     6121 ggctcggcat cgaaggcgtg agaatgcttc ttggcaaagg ccgcaaggat gaaagtggcg
     6181 acttcacaaa aggagccgaa ctgactgatt cccaaattgc gggcatcgtg gcagcgatta
     6241 cgggaggcgc accaaagacg gcggcgccga cgagcgcggg tgaacaagag ctttcggaaa
     6301 ttgccgcttt ggtgcgagct gccggatatg atgaccggat tcgcatcgac aaaacggtag
     6361 tgcgcggcct cgagtattac accggccctg tctacgaagt tgagcttacc ttcgagatta
     6421 aggatgagaa gggtcgaccg gtacgcttcg gttcggtcgg tggcggtggc cgctacgatg
     6481 gcctcgtgtc ccgctttcgc ggcgagccgg cgcccgcgac gggcttctcg atcggagtct
     6541 cgcgcctgca agccgccctc gcccatctcg gcaagatcag cgaaaagcct gtacccgggc
     6601 ctgttgtggt gaccgtattc gaccgggacc ggattgcgga ttatcagcgc atggtgtccg
     6661 ccttgcgtga cgcgaacatt cgcgccgagc tttatctcgg caatcccaag aacaatctcg
     6721 gcactcaact caaatacgcc gacaagcgcc gcgcgccgtg cgcggtcata caggggggca
     6781 acgagaaggc acgcggcgaa gttcagatca aggacctcat cctgggcgcc acgctggccg
     6841 gcaccaagga ccgcgaggaa tatttgaaga aacaggccga ggcg
//
LOCUS       DATDHO010000703         1766 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_79041, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000703 DATDHO010000000
VERSION     DATDHO010000703.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1766)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79041"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            409..795
                     /locus_tag="VIY07_13585"
     CDS             409..795
                     /locus_tag="VIY07_13585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006335286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382823.1"
                     /translation="MSEIQEILTRFWDQLIAQPSGPLAFRLILQPIMATILAIIDGLK
                     DARVGRPPYSWTILSDPSQRAGYVREGLKRLSRVIVFALVMDAIYQFMVLGRFYLGEA
                     LVTAFVLAILPYLLIRGPVDRIARRW"
     gene            951..1313
                     /locus_tag="VIY07_13590"
     CDS             951..1313
                     /locus_tag="VIY07_13590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016919697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1622 domain-containing protein"
                     /protein_id="HEY6382824.1"
                     /translation="MEEALHLAAHYITLVLEALALLVIAIGAVEAIIGILRIMLARRA
                     SDAEKRAVWLGFAHWLIAGLTFQLAADIVHTTVTPGWDEIGRVAAIAAIRTLLTFFLD
                     RDIELQTRHSGENNAKRT"
     gene            1297..>1766
                     /locus_tag="VIY07_13595"
     CDS             1297..>1766
                     /locus_tag="VIY07_13595"
                     /inference="COORDINATES: protein motif:HMM:NF014025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEY6382825.1"
                     /translation="MQSAPDATALIGYGEIFTLFFITLGPLKILGPFAQLTRETDEAT
                     MRKIAVRAFVLAVIAVVAGGFAGRVLLENWGISSSAMLLSGGIIFALVGLTLVLEQYH
                     PVHPAPPPLPAVPMAAAMRITFPTVVTPYGIAALIVVLTNSRDAERTGTILALLL"
BASE COUNT          333 a          553 c          531 g          349 t
ORIGIN      
        1 tgccacctcg gcttccgctg catcgtgcgc gtcgtaagcg gttcaacaca ataacaatcg
       61 cctgcatggg gccttttctt gcacctcagg tatcgtgaaa gaccacgaat cacgaagagc
      121 ggatgccgcg agcgttgggg aggatgtgcg cgcgttttgc gaacgtcatc cctatccacc
      181 tccggtcgac agcgagatct agtcatgcca atcgactcaa ccgaaatggg tttgttcgat
      241 gccattgatg ggagctgcat atcggcgcga tagtggaaag aacgttgcca tcctcacaag
      301 caaaaccgca actcgacatg gcacgtgcct tctttgaaaa gctctggtac tacgaccagg
      361 tggtgttcga cgcgtcgcgg tgccgtgcgt gaagagagga agcctgaggt gtcggagatt
      421 caggaaatct tgacccgatt ctgggaccaa ttgatcgcgc aaccgagcgg gccgttggcg
      481 tttcgcttga tcctccagcc catcatggcg actatcttgg ccatcatcga cggattgaaa
      541 gatgcgcggg tcggccggcc accttactcg tggaccatct tgtccgatcc atcccagcgg
      601 gcaggctacg ttcgcgaagg actgaaaaga ctaagcagag tcatcgtctt tgcgctcgtg
      661 atggacgcga tctaccagtt catggtttta ggaaggtttt acctgggaga agcgctggtc
      721 accgcattcg tgcttgcgat tcttccttat ttgttgattc gcggcccggt cgaccgcatc
      781 gcgcgacgct ggtaacggag aagtatccaa gctgaactga tcaacggcac ctacaagaag
      841 ccggactacg tcgccggacc gtcggagcaa ggcgccaggc gacgcaagca gtgttgacac
      901 gcaactgttg aaaggagtca acgatggcaa agcgcgcctc cgagtagatc gtggaagaag
      961 ccctgcacct tgccgcgcac tacatcacgc tcgtcttgga ggccctcgcg ctgctggtca
     1021 tcgcgatcgg cgccgtcgag gcaatcatcg ggatcctccg catcatgctg gcgcggcgcg
     1081 cgagcgacgc ggagaagcgc gccgtctggc tcggcttcgc gcactggctg atcgcggggc
     1141 tcacgttcca gctcgctgcc gacatcgtgc acacgacggt caccccgggc tgggacgaga
     1201 tcggccgggt tgccgccatc gccgcgatcc gcacgcttct caccttcttc ctcgatcgcg
     1261 acatcgagct tcaaacccga catagcggag agaacaatgc aaagcgcacc tgacgcaacc
     1321 gccctgatcg gctacggcga gatcttcacg ctgtttttca tcacgctcgg gccactcaag
     1381 atcctcggcc cgttcgcgca gctcacgcgg gagacggacg aggcgacgat gcggaaaatc
     1441 gcggtgcgcg cctttgtgct cgcggtgatc gcggtggtgg ccggcggctt cgccggccgg
     1501 gtactgctcg agaactgggg catctcgtcg tcggcgatgc tgctctcggg cgggatcatc
     1561 ttcgcgctcg tcggcctgac tctggtgctc gagcagtatc acccggtgca tccggcgccg
     1621 ccgccgctcc cggccgtgcc catggcggca gcgatgcgga tcacgtttcc gaccgtcgtc
     1681 acgccctatg ggatcgccgc gctcatcgtc gtcctcacca acagccgcga cgccgagcgc
     1741 accgggacca ttctcgcgct cctcct
//
LOCUS       DATDHO010000704         6030 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_231412, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000704 DATDHO010000000
VERSION     DATDHO010000704.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6030)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6030)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6030
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_231412"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VIY07_13600"
     CDS             <1..188
                     /locus_tag="VIY07_13600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012760101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6382826.1"
                     /translation="QAKELGISEQEVIKNVMLKETVDGEFTTVDDVAETALFLASFGS
                     NALTGQSIVVSHGWFMQ"
     gene            298..939
                     /locus_tag="VIY07_13605"
     CDS             298..939
                     /locus_tag="VIY07_13605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016554320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382827.1"
                     /translation="MSDTPAQLGPWLALAGLGLFHGINPAMGWLFAVALGLHRHSQNV
                     VFLSLIPIAVGHAFAVAAVLVVVLALGLVLHWTTLSRVAGLALIGWAIWHAVYGHRRR
                     VRIGMQTGMAGLALWSFFMASAHGAGLMLIPVVVPLCLAASPAQGLTLSSALSVSLAA
                     LSVHTGTMLAMIALISIVVYRWIGVEFLTRGWINLDLLWAVALGLCGALLLIT"
     gene            complement(957..1742)
                     /locus_tag="VIY07_13610"
     CDS             complement(957..1742)
                     /locus_tag="VIY07_13610"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6382828.1"
                     /translation="MDVAEKTVVVTGGGSGIGRALCEAFHQAGAKKIVVADIDLQAAE
                     AVAGRIGGAAILCDVAEEAQVRSLIEKTEAEFAPIDLYCSNAGVALGFSPRVENAAAG
                     PEELWERSWSINVMGHVYAARHLIPRMKARGGGYLLNTISAAGLLTQIGSAIYSTTKH
                     AAVGFAENIAIAHRDDGIKISILCPQAVDTPLLHRLPSGPQSGDGVLSPEQVAQAAIR
                     GLERETFLILPHAEVEGYVRRKMENRDRWIDGMVRLQRRLSQS"
     gene            complement(1792..2583)
                     /locus_tag="VIY07_13615"
     CDS             complement(1792..2583)
                     /locus_tag="VIY07_13615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RMD1 family protein"
                     /protein_id="HEY6382829.1"
                     /translation="MSVQSSSHITVRALLLGDRIDTSGLERHDVLSTTPLAFRIEGGA
                     FVALFRYGVVVLFGMTPFQEDEIIRSLDGRIVGRFPKPEEETADIEIAPDKDEQIAPN
                     GTILLKALLPEHILIIADAIATNLILAHDERDVSAVFDVIEPLARELAEQGRTPGGRR
                     SLLKHIGNALLVQQRVSGLVAVAEKPDVLWERTDLERFYARLEDEYELKERADLLTRK
                     LTVISDTAKALADLIDTERSLRLERIIIALILLETIIMGYQLFVH"
     gene            complement(2758..3324)
                     /locus_tag="VIY07_13620"
     CDS             complement(2758..3324)
                     /locus_tag="VIY07_13620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY6382830.1"
                     /translation="MSVATNKLAVTGPLRIVIDAPDSSRRTALSRLVVETGHIIVDDL
                     KSADVILSEGSELSVADGPPVLALGNTDLRVRGVISRDASAEQIDAALRAVAAGLVVR
                     SSAAENTGFESARESDARALLTPRELDVLAAIADGDTNKAIARRLGISLHTVKFHVES
                     LFRKLGARTRTEALAKASERRLSDTITL"
     gene            complement(3321..4220)
                     /locus_tag="VIY07_13625"
     CDS             complement(3321..4220)
                     /locus_tag="VIY07_13625"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HEY6382831.1"
                     /translation="MSDQLDPLAQFSNALAARVDAAKSIIASISLPHGRHLTGIVWRP
                     DIVVTSEQSLPDRDEFDIGAAGGPVTGAKIAGRDPATNIAVLRLPAPTASFSFDKSDV
                     RTGAVAIAIGDGTGGASARFGIINVLGPEWHSRHGGLIDQRIELDLRLARKEEGGPVF
                     DVAGGFIGMTTFGPRRRVLVIPKATLERIVPQLLKDGRVARGWLGVALQAVAVPETLR
                     EAANQSGGLMVMSIVKDGPAAQAGIVAGDIILSVNGTPTHPFRKIARHFGSESIGRKA
                     DLRVIRGGAVITVQTSIAERPAA"
     gene            complement(4357..5064)
                     /locus_tag="VIY07_13630"
     CDS             complement(4357..5064)
                     /locus_tag="VIY07_13630"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6382832.1"
                     /translation="MKLLTGHHRQHNPIMAKAAGIVRSGRLGRLVAVVGTTMFCKPDS
                     YFEAGPWRRQPGGGPLLINMVHEVGNLRSLCGEIVAVQAFASSATRNFPVEDTVAVSL
                     RFANSVLGTFMLSDTAAAPRSWEQTTGEDPAFSSYPDEDCYIVAGTLGSLAFPTMRLR
                     FYADPARRSWSNPFESETIAVERADPLTRQLENFCAVIRGTAEPVVSARDGLQNLRVL
                     DAIQRAARSGKASTVAQ"
     gene            complement(5104..5184)
                     /locus_tag="VIY07_13635"
                     /pseudo
     CDS             complement(5104..5184)
                     /locus_tag="VIY07_13635"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5186..5407)
                     /locus_tag="VIY07_13640"
     CDS             complement(5186..5407)
                     /locus_tag="VIY07_13640"
                     /inference="COORDINATES: protein motif:HMM:NF013567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6382833.1"
                     /translation="MTQPLRIAVVGAGAIGRQHIERVLKNRECRLTAIVDPAPNASEI
                     AEKARAPLVGSLADVLARERPDGVIGHAQ"
     gene            complement(5404..>6030)
                     /locus_tag="VIY07_13645"
     CDS             complement(5404..>6030)
                     /locus_tag="VIY07_13645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6382834.1"
                     /translation="FEPVTTKNGADAGLTVVDHISQSMHYEEMLSWLLFYTSLIDVQK
                     TPQVDITDPGGIVRSQVVETADGTLRIALNASQSTRTQSSRFLNEYFGSGVQHIAFGT
                     KDILTTAARLKANGVEVLRIPDNYYDDLEARVDLDSTRLKLLKENNILYDRDDSGEYL
                     QLYTRSFKDLFFLELVERRGYKGFGAINAPIRLNAQSRLAGDPAASAL"
BASE COUNT         1226 a         1817 c         1751 g         1236 t
ORIGIN      
        1 agcaagcgaa ggaactcggc atttcagagc aggaagtgat caagaatgtg atgctaaaag
       61 aaaccgtgga tggcgaattc acaacggtgg atgatgtggc tgagactgcg ctcttcctgg
      121 cctcctttgg gtcgaacgct ctgaccgggc aatccattgt ggttagccat ggatggttca
      181 tgcaatagcc agatgcggct gctctggccg aagagcctca gaccgatgcc atgccaaaaa
      241 caacgacgag ccacagcgtg caaggcagtc gttcagccta atccgaacag ttgatcaatg
      301 agtgatacgc ctgcgcagct cggaccctgg ctcgcgctgg ccgggttggg actgtttcac
      361 ggcatcaatc cggccatggg ctggctgttt gcagtcgcgc tcggtctgca ccggcacagc
      421 cagaacgtag tgtttctgtc gctgataccg atcgccgttg gccatgcatt cgctgtcgcc
      481 gcagtgctgg tcgtggttct tgcgctcggc ctggttcttc actggacaac cctcagccgg
      541 gtcgccggcc tcgcgctcat cggctgggcg atctggcacg ccgtgtacgg tcaccgccgc
      601 cgcgtgcgca tcggcatgca gacggggatg gcagggctcg cgttgtggtc gttcttcatg
      661 gcgagcgcgc atggcgccgg actgatgctg atccctgtgg tggtgcccct ttgccttgcg
      721 gcgtcgccgg cacagggact tacgctgagc agcgctttgt ccgtttcgct cgctgccctg
      781 agcgttcata cgggaacaat gctggcgatg atcgcgctca tctcaatcgt cgtctacaga
      841 tggatcggcg tcgagtttct cacgcgtgga tggatcaatc ttgatcttct ttgggctgtt
      901 gcgctcggcc tgtgtggggc gctgttgctc attacctaac ttaattccac gttcgctcac
      961 gattgagaga ggcgacgctg cagccgcacc atgccatcga tccaacggtc tcgattttcc
     1021 atctttctcc gaacgtatcc ctccacttcg gcatgcggca ggatcaggaa cgtttcgcgc
     1081 tcgagacctc gaattgcagc ctgcgccacc tgttctggcg acaagacacc gtcaccggat
     1141 tgcgggcccg atggaagccg gtgcagcaac ggcgtgtcca cggcctgcgg acaaagaatg
     1201 gatatcttga tgccgtcatc gcgatgggca atcgcaatat tttctgcaaa gccgaccgcg
     1261 gcgtgtttgg tcgtcgaata gatcgcgctt ccgatttgcg tcaggagacc cgcagccgag
     1321 atcgtgttga gcaaatatcc gccgccgcgc gccttcatgc gcggtataag atgacgggcg
     1381 gcgtagacat ggcccatcac gttgatagac caggaccgtt cccacaattc ctccggtccg
     1441 gccgcggcat tttccacgcg cggagaaaag ccgagcgcaa caccagcatt cgagcaataa
     1501 agatcaatcg gtgcgaactc ggcctcggtc ttctcgatca acgatcggac ctgcgcttcc
     1561 tctgccacat cgcacaatat tgcagcaccg ccgatgcgac ctgccacggc ttcggctgcc
     1621 tgcaggtcaa tgtccgcaac gacaatcttt tttgcaccgg cttggtggaa tgcctcgcac
     1681 agggcgcgtc cgatgccact gcccccacct gtcacaacga ccgttttttc ggcgacatcc
     1741 atttttagtc agcagcccaa cgcattgacg tttattttta gccggcgtcc gttaatgcac
     1801 gaaaagctga tatcccatga taatggtctc gagaaggatc aacgcgatga ttattctctc
     1861 cagacgcagc gagcgctcgg tatcgataag atccgcaaga gccttcgcgg tgtccgagat
     1921 caccgtcaat tttcgggtca ataaatcggc acgttccttc aactcgtatt cgtcctcgag
     1981 cctggcataa aatcgttcga gatccgttct ctcccagagc acatcgggct tttcggcgac
     2041 cgccacaagg cccgacacgc gctgctgcac aagcaacgca tttccgatgt gcttcaaaag
     2101 cgaccgtcgg ccgccgggag tacggccctg ttctgccagc tcgcgcgcca atggttcgat
     2161 cacgtcaaag accgcgctga cgtcgcgctc gtcgtgcgcc aggatcaaat tcgtcgctat
     2221 cgcgtcggca atgatcagga tgtgctcagg caggagcgcc ttgagcagga tcgtcccatt
     2281 gggcgcgatt tgttcgtctt tatcaggggc gatctcgatg tctgccgtct cctcctccgg
     2341 cttgggaaaa cgtccgacga tgcggccatc caggctgcgt atgatttcgt cttcctgaaa
     2401 cggggtcatg ccgaataaga ccacgacccc gtatcgaaaa agcgcaacaa acgcgccgcc
     2461 ttcgatacga aacgccagag gcgtcgttga caggacgtcg tggcgctcaa gtcccgacgt
     2521 atcgattcga tcgcccagca aaagagcccg aaccgtgatg tgcgaactgc tctgaacaga
     2581 caactcgatc accgtacaaa gaggcgttca acggcctgat tagtgcctga ttggcctgat
     2641 ggaaggacga gatccgcggg gcctgcgggc ctgcaattag gtcactgtac caagtccaga
     2701 acttcaaatg cagtcaaggt tccacgcgaa ttatcgcacg cagcgcgacg aaaccaatca
     2761 caatgtaatt gtgtcgctaa gacgtcgttc agaggccttt gcgagcgctt cagtcctggt
     2821 acgggcgccc aatttccgaa acagcgactc gacatgaaat ttcacggtgt gcaacgaaat
     2881 gcccaatcgg cgcgcaatgg ccttgttggt atcaccgtcc gcaatcgcag ccagcacatc
     2941 gagttcgcgc ggcgtcaata gtgcacgcgc atcgctctca cgcgctgatt cgaaaccggt
     3001 attctctgca gccgaggagc gaacgaccaa cccggcggcc actgctctga gtgcggcatc
     3061 gatttgctcc gcactcgcat cgcgcgaaat cacgcctcgg acgcgaagat cggtatttcc
     3121 gagagccagc actggcgggc catcagccac cgagagttcg cttccttccg agagaataac
     3181 gtcagccgac ttcaaatcgt cgacaataat gtgtcctgtt tcgacgacca gtcggctcaa
     3241 cgccgttcgc cgcgaggaat ccggtgcatc gatgacgatg cgcaatggac cggtgacggc
     3301 caatttatta gtcgcgacac tcatgccgcg gggcgctccg caattgatgt ttgcacggtg
     3361 atcacggctc cgccgcggat gacccggaga tcagcctttc gcccaatgct ttcggaacca
     3421 aaatgcctgg cgatttttcg aaatgggtgt gtcggcgttc cgtttacact caatatgata
     3481 tcgcctgcga ctatccccgc ctgtgcggca gggccgtcct tgacgatcga catgaccatt
     3541 aacccgcctg actgattggc agcttctcgc agcgtttcgg gcacggcgac agcctgcaat
     3601 gcgacaccga gccagccccg tgcaacgcgg ccgtccttaa gcaattgcgg cacgatacgc
     3661 tccagggtcg ctttcggaat aacaagaact cgtcggcgcg gtccgaaagt cgtcatgcca
     3721 atgaagccac cggcaacatc gaaaacgggg ccaccctctt ccttgcgggc aaggcgaaga
     3781 tcgagttcga tgcgctgatc aatcaagcca ccgtgcctgc tgtgccattc gggcccgagg
     3841 acattgataa ttccaaagcg cgcgcttgca ccgccagttc catccccaat cgcaatcgca
     3901 accgcgcccg ttcggacgtc gcttttgtca aacgaaaacg aggcagttgg cgcgggaaga
     3961 cgcagcaccg cgatgttagt ggcaggatcg cgaccggcga tcttggctcc ggtgaccgga
     4021 cctcctgcgg ccccgatgtc aaattcgtcg cggtcgggta acgattgctc ggaggtaacg
     4081 acgatatcgg gccgccacac aatgccggtg agatgccgcc cgtgcggaag agaaatggac
     4141 gcaatgatgg attttgcggc gtcaacccgc gcggccaagg cgtttgagaa ctgtgcaagc
     4201 gggtccagct gatcgctcat ggtagcaact cctgtccatt cagatagtgg ccagaatgga
     4261 aaatgccgca gggccagact accggccaaa cggccgggat tgccccggcc gtttgaccgg
     4321 gttgcgatca ggcgttgcgg cttagggagc ggtcgtttac tgcgcgaccg tggacgcttt
     4381 tccgctgcgc gcggcccgtt gtatcgcgtc gagaacgcgc aggttctgca agccgtcgcg
     4441 cgcgctcacc accggctccg ccgtgccgcg tatgaccgcg cagaaatttt cgagttgccg
     4501 cgtcagcgga tcagcccgtt cgacggcaat tgtctcgctt tcgaacgggt tcgaccaaga
     4561 ccgtcgtgcc gggtcggcgt agaatctcag gcgcatggtg ggaaacgcca gcgagccaag
     4621 tgtaccggcg acgatgtaac aatcttcgtc gggataggaa gagaaggctg gatcctcccc
     4681 cgtcgtctgt tcccagctcc gcggcgcagc tgcggtgtcg gacaacatga acgtgcccag
     4741 aaccgagttc gcgaagcgca ggctgacagc aaccgtgtcc tcaaccggaa agttacgggt
     4801 cgctgacgag gcaaaggcct gtacggctac gatttcgccg cagagcgagc gcaaatttcc
     4861 gacttcatga accatgttga tcagcagcgg tccgcctccg ggctggcgtc gccacggacc
     4921 cgcttcgaaa tagctgtcag gcttgcaaaa cattgtggtg ccaacgacag ccaccaggcg
     4981 tccgagccgg ccgctgcgca cgatcccagc cgccttcgcc atgattggat tgtgctggcg
     5041 atggtgcccc gtcaacagct tcacattcgc acgctcggcg gcctgacata gctgctcacc
     5101 ggcctcgatc gtatccgcga gcggtttttc aatcagggcc gggacgccgg ccgcgacgca
     5161 cgcaaggcct tgttcgacat gcagtctatt gggcgtggcc gatcacgccg tccggacgtt
     5221 cccgcgcgag cacgtccgca agcgaaccaa cgagtggagc acgggctttt tcagcaatct
     5281 cggacgcatt gggtgccgga tcgacgatcg ccgtcagccg gcactcccga ttttttagca
     5341 cccgctcgat atgctggcgc ccgatggcgc cggcgccaac gacagcgatg cgcaagggct
     5401 gcgtcacagg gcggaagccg caggatcgcc cgcaagccgc gactgcgcgt tcagtcggat
     5461 tggcgcatta atggcaccga aacctttgta accgcgtcgc tccacgagtt cgaggaagaa
     5521 cagatccttg aagctcctcg tgtagagctg aagatattcg ccgctgtcgt ccctgtcgta
     5581 gaggatgttg ttctctttta gaagcttcag gcgcgtgctg tcgagatcga cgcgagcctc
     5641 gaggtcatca taatagttgt cgggaatgcg caagacctcg acgccgttgg ccttcaggcg
     5701 agccgcagtc gtgagaatgt cttttgtgcc gaaggcgatg tgctggacac cggaaccgaa
     5761 gtactcgttg agaaaacgcg acgactgcgt gcgcgtgctt tgcgaagcgt tgagagcgat
     5821 gcgaagcgtg ccatctgcgg tctccacgac ctggctgcgg acgatgccgc cgggatcggt
     5881 gatatcgacc tgcggcgttt tctgcacgtc aatcagcgaa gtatagaaaa gaagccagga
     5941 cagcatctcc tcgtagtgca tcgactgcga gatatgatcg acaaccgtga ggcctgcatc
     6001 ggcaccattt tttgtcgtca ccggctcgaa
//
LOCUS       DATDHO010000705         1598 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_475610, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000705 DATDHO010000000
VERSION     DATDHO010000705.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1598)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1598)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1598
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_475610"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>1598
                     /locus_tag="VIY07_13650"
     CDS             <1..>1598
                     /locus_tag="VIY07_13650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEY6382835.1"
                     /translation="MRLLLRFFGFLFAAGTILFVVGVAAAAGLLWHFSKDLPDYSQLQ
                     DYEPPVMTRVHAGDGSLVAEYARERRLYIPIQAVPKLVINAFLAAEDKNFYDHGGLDF
                     TGIARAGIVYLQNYGSSRRPQGASTITQQVAKNFLLSNELSMSRKVKEALLALKIERT
                     YSKDKILELYLNEIYLGLGAYGIAAASLVYFDKAVNELTVPEAAYLASLPKAPNNYHP
                     FRQRERAIERRNWVIDRMAESGFVKSADAEKAKRSPLGVTTKATSAHIFAAEYFAEEV
                     RRELYERYGEKKLYEGGLSVRTSLDPKLQLLARKTFIDGLVRYDEAQGWRGPVTKIDI
                     AGDWGVKLAEVKALSDIAPWRLAVVLEVSDQSARVGLQPGREPGGFVSKERTVGILPL
                     EGMKWAKSGGRAVGKVTQVVSPGDVVYVEPGKSEGQFILHQIPEISGAMVVEDPWTGR
                     VLAMVGGFSFDQSQFNRATQALRQPGSSFKPFVYAAALDNGYTPSTVVLDAPVEIDQG
                     PGVGTWRPENYEGKFYGPATLRFGL"
BASE COUNT          305 a          476 c          486 g          331 t
ORIGIN      
        1 atgaggctgc ttctgcgctt cttcggcttc ctgtttgctg caggaacgat tctctttgtg
       61 gtgggcgttg ccgcagccgc cgggctgctt tggcactttt ccaaagacct tccggattat
      121 tcccagctgc aggactatga acccccggtc atgacgcgtg ttcacgcggg agacggttcg
      181 ctggtggccg agtatgcccg cgagcggcgg ctctatatcc cgatccaggc cgtccccaag
      241 ctcgtcatca acgccttcct cgccgccgag gacaagaact tctacgacca tggcggcctt
      301 gatttcaccg gcattgcgcg tgccggcatc gtttacctgc agaattacgg atcgagccga
      361 cgccctcaag gcgcttcgac tatcacgcaa caagtcgcca agaacttctt gctgtccaac
      421 gaactttcga tgtcgcgcaa ggtcaaggag gcgttgctcg ccctcaagat cgagcggacc
      481 tacagcaagg ataagattct cgagctttac ttgaacgaaa tctacctggg gcttggtgca
      541 tatggcattg ccgcggcatc gcttgtctat ttcgacaaag cggtaaacga actcaccgtt
      601 cctgaagcgg cctatctcgc atcgttgccc aaagcgccga acaactatca tccgttccgc
      661 cagcgtgagc gcgcaatcga gcggcgcaat tgggttatcg atcggatggc ggaatcgggc
      721 ttcgtgaagt ccgccgacgc cgaaaaagcg aagcgctctc cgctcggggt gacgacgaag
      781 gctacgagcg cgcacatctt cgctgctgaa tatttcgccg aggaagtccg gcgcgaactt
      841 tacgagcggt acggcgagaa aaagttgtac gagggcggtc tttccgtccg cacgtcgctt
      901 gatccaaagc ttcagctgct tgcacgcaag acgtttatcg atggtcttgt gcgctacgac
      961 gaggcacaag gatggcgcgg cccggtcacg aagatcgata ttgccggcga ctggggagtc
     1021 aaactcgcgg aagtaaaggc tttgtccgac atagcgccct ggcgattggc ggtggtgctt
     1081 gaggtcagcg atcagtccgc ccgtgtcggg ctgcagccgg gtcgcgagcc cggcggcttt
     1141 gtcagcaagg agcgcaccgt cggcattctg ccgctcgagg gaatgaaatg ggccaaatcc
     1201 ggcgggagag cggtcggtaa agtgacccag gtcgtcagcc cgggtgacgt cgtttatgtc
     1261 gagccgggga aatccgaggg ccagttcatc ctgcaccaaa ttcccgagat ttccggcgcc
     1321 atggtggtcg aggatccgtg gaccgggcgc gtgcttgcga tggtcggcgg cttctctttc
     1381 gaccagagcc agttcaaccg cgccacccag gcgctgcgcc aacccggctc gtcgttcaaa
     1441 ccgtttgtct atgcggcggc gctcgacaac ggctacacgc cttccaccgt cgtgctggat
     1501 gctccggtcg aaattgatca gggccccggc gtggggacct ggcggcccga aaactatgaa
     1561 ggcaagttct acgggccggc taccttgcgc ttcggcct
//
LOCUS       DATDHO010000706         1809 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_282205, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000706 DATDHO010000000
VERSION     DATDHO010000706.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1809
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_282205"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            424..>1809
                     /locus_tag="VIY07_13655"
     CDS             424..>1809
                     /locus_tag="VIY07_13655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEY6382836.1"
                     /translation="MAVQAQFFWNWNQQDQSNRQRSRPQSGGFFDWFGGGQNNSRPRD
                     DDSYRPPRQRQYQPQQQPSESSRAPAAKKADAKDEQTGPATSIVVMGDDMADWLGYGL
                     EDVFSDTPEIRVVRKNKLNSGLLHYDAKGDLDWWHVARDTLAQEKADYVVMMLGIGDR
                     QEIRVKDLAKEADTRAKDQQAKDQAAKDQQVKDRQIKDEAEKKDGQKPAKTNDADENG
                     TPSAQRAKKPVGPAEFRSEEWEKIYSRRIDDTIAALKSKGVPVIWVGLPSLRGARSAS
                     DAAYLNELYRARAERAGIKFVDVWDGFVDQAGRYANYGPDYEGQVRRLRSSDGVFFTK
                     AGAIKLARYVEQELSRYMSNRVPVALPPGPLDAAPSDSKPTERPLMGPVIALTGTAKD
                     KDKDSNSLLGAPGSSPTLGDATATKVLANGETVPAPPGRADNFAWLNRTQTESAAAAP
                     EPPIADQPKPEA"
BASE COUNT          416 a          525 c          532 g          336 t
ORIGIN      
        1 gccccattgg cgatcatgcc atcttcggag atgatggcgt aaccttcaat tcgagacggc
       61 ttactcaccg aacttcgtca tcttgcttgc cgtgcccctg cctagacgaa accattaccc
      121 cactgaacgc gtaacctcat caaaaccctc tggattatta cgacctattg tgagagttac
      181 actcgagagg tttgtgtttt gacgtatgtc ggtgcgctca agcacaaaat tcaacgcatt
      241 gcgcgactta atacggcctc taccggtatt ttccaccgcc ggaacttcac cagcttgacg
      301 cggttaggac aattgtggcc gaattcgaat gctcaccgaa ccatcaatat gcttagcaaa
      361 atgcgattat gtacgcgttg gcttgtggtg gcgactgttc tggcgttagc ccagtcgacc
      421 agcgtggctg tgcaagccca gtttttctgg aactggaacc agcaggatca gtctaacagg
      481 cagcggtccc ggccgcagtc gggcggattt ttcgattggt tcggcggcgg ccaaaacaat
      541 tcgcgacccc gcgacgacga ttcctaccgt ccgccgcgcc agcggcaata tcaaccgcaa
      601 cagcagccaa gcgaaagctc gcgtgcaccg gcggcgaaaa aagcggacgc gaaagacgag
      661 cagaccgggc ctgcgacttc gattgtggtg atgggcgacg acatggccga ctggcttggc
      721 tatggcctcg aagatgtctt ctccgatacg ccggagattc gcgtcgttcg caagaacaaa
      781 cttaactcag gcctgctgca ctacgacgcc aaaggcgatc tcgactggtg gcacgttgcg
      841 cgcgatacgt tggcgcaaga gaaggccgac tacgtcgtca tgatgctggg catcggcgac
      901 cgtcaggaga ttcgcgtaaa ggatcttgcc aaagaggctg atacaagagc caaggaccaa
      961 caggccaaag atcaggcggc caaggatcag caggtcaagg accggcagat caaggacgaa
     1021 gccgaaaaaa aggatgggca gaagcccgcg aagacaaacg atgccgacga gaacggcacg
     1081 ccctcagcgc aacgtgcgaa aaaacctgtt ggccctgccg agtttcgcag cgaggaatgg
     1141 gaaaagatct actcgcggcg catcgacgac acgattgctg ctctcaaaag caagggggtg
     1201 ccagtcatct gggttggtct gccatcactt cgcggcgctc gctccgcgag cgacgcagcc
     1261 tatctcaatg aactctatcg cgcccgcgcc gagcgcgccg gcattaagtt tgtcgatgtg
     1321 tgggacggct tcgtggatca ggccggcagg tatgccaatt atggtcccga ctacgaaggg
     1381 caggtgcgcc ggctgcgatc gagcgacggc gttttcttca ccaaagctgg agcgatcaag
     1441 cttgcgcgtt atgtcgaaca ggaattgagc cgctatatga gtaatcgcgt gccggtggcg
     1501 ctgcctcccg gaccgttgga tgcggcgccc tccgattcaa agccgaccga gcggccgctg
     1561 atggggcccg tgattgcact gactgggacg gcgaaggaca aggacaaaga ctctaatagc
     1621 ctccttgggg ctcccggcag cagcccgacc ctcggcgatg cgactgccac gaaagttctg
     1681 gcgaacggcg agacagtacc cgccccgcct gggcgtgccg ataattttgc gtggctgaac
     1741 cgcactcaaa ccgagtctgc cgcggctgcg ccagaaccgc caattgcgga ccagcccaag
     1801 ccagaggcg
//
LOCUS       DATDHO010000707         2786 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_430449, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000707 DATDHO010000000
VERSION     DATDHO010000707.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2786)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2786)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2786
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_430449"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..323
                     /locus_tag="VIY07_13660"
     CDS             <1..323
                     /locus_tag="VIY07_13660"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEY6382837.1"
                     /translation="YRILPGRVPAQLDLYSKLAYPLQLRYMGEPHYYLVSETGQLNTL
                     VHGWVYENAADREQKRAKMMQDPDWKHFLSENAKAGNIIEQANWLMTPAPFSPKIPSA
                     KIVK"
     gene            329..2035
                     /locus_tag="VIY07_13665"
     CDS             329..2035
                     /locus_tag="VIY07_13665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY6382838.1"
                     /translation="MRGKDNARTGGEILIDQLSIQGVQHAFCVPGESYLAALDAFHGS
                     DIKLTVCRHESTAAMMAEAVGKMTGLPGICFVTRGPGATNASAGVHIARQDSSPMIAF
                     VGQVARDMRNREAFQELDYRAVFGSMAKWATEIDDPARIPEIISRAFHTACNGRPGPV
                     VIALPEDMLRERVSVPDARAFDRVEISPGGADMSRLQELLQLAKRPIALIGGSLWNER
                     STAALMRFAERFALPMATTFRRGHLFDAMHRCYAGDLGIGPNPKLLARVKSADLLLLI
                     GGRFSEMPSQGYSILDIPEPQIKLVHVHPGAEELGRVYHPHLAINASPNAFCAALDTL
                     QPPKEIAWRGESDAAHADYLAWSEKATSVPGAVNLGEVMIWLRDNLPPDAIVTQGAGN
                     FSGWVHRFYRVRKFGGLVGATSGSMGYGLPAALAMQTLFRDRIVVCVAGDGDFLMTGQ
                     DFATAVQYQLPVIVLVADNGIYGTIRMHQERDYPGRVIATALRNPDFVAYALAFGGYG
                     AVVEKTADFPAAFAAAHASGKPSIIHLKIDPEAITPTATLSGIREKSLAGGGGTSGTH
                     QN"
     gene            2099..2758
                     /locus_tag="VIY07_13670"
     CDS             2099..2758
                     /locus_tag="VIY07_13670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEY6382839.1"
                     /translation="MPYRRTENVARRLAEREQTILDAAQSIAGEEGMGGVQIAAVAQR
                     ADIAAGTVYRYFPSKNDLVSEMISGTAERELAAMRAAADAAPGPLSALAACIATFAAR
                     ALQERRLAWALTAEPVDADIDALRLSFRRALVGEMEQRIAAAVAAGHLPVQDPRFAAP
                     AVVGAVLEGVVGPLAPSASATHEAVQTTTLLALRALGVVDARARGLVAQFVSSDFVKT
                     R"
BASE COUNT          512 a          839 c          879 g          556 t
ORIGIN      
        1 catatcgaat tctgccaggc agagtgccgg cgcagctcga cctctacagc aagctggcct
       61 accccctgca gctgcgatac atgggcgagc cgcactatta tctcgtcagc gagacgggtc
      121 agctcaacac tctggtgcat ggctgggtct acgagaacgc agccgaccgc gaacaaaaac
      181 gcgcaaagat gatgcaggat ccggactgga agcattttct ctcagagaat gcaaaggcgg
      241 gaaatatcat cgagcaggcc aactggctga tgacacccgc tccattctcg ccgaaaattc
      301 cgtcggcaaa gatcgtgaag taaggctaat gcgcggcaag gacaatgcac gcaccggcgg
      361 cgaaatcctg atcgaccagc tgtcgatcca gggggtgcag catgcatttt gcgtgccggg
      421 cgaaagctac cttgccgcgc tcgatgcctt ccatggcagc gatatcaagt tgaccgtctg
      481 ccgtcacgaa agcacggccg ccatgatggc agaggcggtc ggcaagatga ccgggctgcc
      541 cgggatttgt tttgtcacgc gcggacccgg ggccaccaat gcgtcggctg gcgtccatat
      601 tgcgcgtcag gattcctcgc cgatgattgc gtttgtcggt caggtcgccc gcgacatgcg
      661 caatcgcgag gccttccagg agctcgacta tcgcgcggta ttcggctcga tggccaaatg
      721 ggcaacggaa atcgacgatc ctgctcgcat tccggaaatt atttcccgcg catttcacac
      781 ggcctgcaac gggcgcccgg gaccggtcgt gatcgcactt cccgaggaca tgctccgtga
      841 gcgcgtatcc gtgccggatg ccagggcctt tgacagggtg gaaatctcgc ccggcggcgc
      901 cgacatgagc cggcttcagg agctgttgca actcgcgaag cggccgatcg cgctgatcgg
      961 aggcagccta tggaacgaaa ggtcgacggc tgcgctgatg cgttttgccg agcggttcgc
     1021 actgccgatg gccacgacct tcaggcgcgg acatttgttt gatgcgatgc accgttgcta
     1081 tgccggcgac ctcggcattg gtcctaatcc gaaactgctt gcgcgcgtga agagcgccga
     1141 tctgctgctg ctgattggcg gtcgcttcag cgagatgccg tcgcaaggtt acagcatcct
     1201 cgacattccg gagccgcaga tcaaactggt tcacgtccat ccaggcgcgg aggagctcgg
     1261 ccgagtctat catccgcatc tcgccataaa tgcatctcca aatgcatttt gcgccgcgct
     1321 cgacaccctg cagccgccaa aggagatcgc ctggcgcggt gagtccgatg ccgcgcatgc
     1381 ggactatctt gcctggagcg agaaggctac atctgtgccg ggcgcggtca atctcggcga
     1441 agtgatgatc tggctacggg ataacttgcc gcccgacgcg atcgtgacgc agggtgcggg
     1501 aaatttctcc ggctgggtgc atcgcttcta tcgcgtgcgc aagttcggcg gtcttgtcgg
     1561 cgcgacgtcg ggctcaatgg gatacggctt gcccgccgcg ctcgcaatgc agacgctctt
     1621 tcgcgatcgc atcgttgtct gtgttgccgg agatggcgac ttcctgatga cggggcagga
     1681 ctttgccacg gcagttcaat atcagctgcc ggtgattgtc ctggtcgccg acaacggcat
     1741 ctatggcacc atccgcatgc atcaggagcg cgactatcca ggccgcgtga ttgcgaccgc
     1801 acttcgcaat ccggatttcg ttgcctacgc gcttgctttt ggcggctatg gggctgtcgt
     1861 ggaaaaaacc gccgactttc cggcggcgtt tgccgcagcg cacgcgtccg gcaagccgtc
     1921 gatcatccac ctgaagatcg atccggaagc gattacgccc accgccaccc ttagtgggat
     1981 tcgggaaaag tcgctggctg gcggtggcgg caccagtggt acgcatcaaa actagaaact
     2041 caggtttgtc ttccgattgt ggttgcagaa tcgcggtgaa tcagcattca ctcggttcat
     2101 gccctatcgt cgcacggaga acgttgcgcg ccggctcgcc gagcgtgagc agacaattct
     2161 cgatgcggcg caatcgattg ccggtgagga aggcatgggc ggggtgcaaa ttgctgccgt
     2221 ggcgcaacgc gctgacatcg ccgcaggcac cgtctatcgc tactttccct ccaagaacga
     2281 tcttgtcagc gaaatgatat ccggcacggc tgagcgcgag ctcgctgcca tgcgtgccgc
     2341 tgcagatgcc gcaccggggc cgctgtcggc cctggccgcc tgcatagcca cttttgctgc
     2401 gagggcattg caggagcgac ggctcgcctg ggcgttgact gccgagccgg tcgatgcgga
     2461 catcgatgcc ttgcggctca gctttcgccg cgcattggtc ggtgaaatgg aacaacgcat
     2521 cgccgccgcg gttgccgccg gtcatctacc tgttcaggac ccgcgtttcg cggcgcctgc
     2581 cgttgtcggc gctgtgctcg aaggggtggt cgggcccctg gcgccatcgg cgagcgcgac
     2641 ccacgaggcc gtgcaaacga ccacgctcct cgcattacgc gctctgggtg tggttgatgc
     2701 gcgggcgcgg ggtctggtgg cgcagtttgt atcgagtgat ttcgtcaaga ctcggtgagt
     2761 gccggcaact cgtgcagcgg cagtgt
//
LOCUS       DATDHO010000708         1564 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_133331, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000708 DATDHO010000000
VERSION     DATDHO010000708.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133331"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            304..759
                     /locus_tag="VIY07_13675"
     CDS             304..759
                     /locus_tag="VIY07_13675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015242247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY6382840.1"
                     /translation="MISLTINGKAYSLDVEAKTPLLWVIRDELGMTGTKFGCGIAQCG
                     ACTVHVDGEAMRSCSVQVGDVANKIITTIEGLSSDARHPVQQAWLAEDVPQCGYCQSG
                     QIMAAAAFLKQYPKPTDADIDANLNNICRCGTYVRVRRAIHRAAELMKT"
     gene            774..>1564
                     /locus_tag="VIY07_13680"
     CDS             774..>1564
                     /locus_tag="VIY07_13680"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6382841.1"
                     /translation="MNQIINTSISRRRFVVSSASLAGGLAITVALPGFADAASIAAQP
                     YGTDVPTNEINAFLAISPDGGVLIRSPHNEMGQGAITALPMIVAEELECDWSKVKVEY
                     ASAERNLREKEVYGPMATVGSRGVRASWQMLLQAGASARERLIVAAAQRWNVPTSECE
                     AANSKVTHKNTGRSFEYGELAGDAGRIKLDKEPAIRTPDQFKLIGKPLPRLDTPLKVN
                     GAAKFAIDTQVPGMVYAAVAACPVFGGKLKSVDDSPAKGRRGVLQV"
BASE COUNT          323 a          490 c          479 g          272 t
ORIGIN      
        1 ggcagtgtgc gatcgtcgcc gcgtgttccc ccaggacggc aagaagcacc cgccgaataa
       61 cggcgccggg atcgcccccg cgaaatctgc acaatgttgc caagaacgtt gccaaatagc
      121 atctttagct tgttaaaagg agcacgaaat aacgccaact tattgtttct gtttatttct
      181 atcgccccat cgccactggc gataaagcat ctgtgaagtg attgcacccg tgccgggtgt
      241 ttagactttc atgcacaggc cggcagctga cgggttccgg ccaggtaaag agagcgaggg
      301 ctcatgattt cactgacaat caatggaaag gcgtattcgc tggacgtcga ggcgaaaacg
      361 ccgttgctct gggtcatccg cgacgagctc ggaatgaccg gcaccaagtt cgggtgtggc
      421 atcgcgcaat gcggcgcatg cactgtccat gtcgatggcg aggccatgcg gtcttgcagc
      481 gtccaggttg gcgatgtggc taacaagatc atcaccacca tcgaaggcct ttcgtcggac
      541 gccaggcacc ccgtgcagca ggcctggctc gccgaggacg tgccgcaatg cggttattgt
      601 cagtccgggc agatcatggc cgcggcagcc tttctcaagc agtacccgaa gccgaccgac
      661 gccgatatcg acgccaacct caacaatatc tgccggtgcg gaacctatgt ccgcgtccgc
      721 cgcgccattc atcgcgccgc agaactgatg aagacgtgag aggagggcgg accatgaacc
      781 agatcatcaa tacgtccatc agccgccgcc gcttcgtggt ttcttcggcc tcgctcgcgg
      841 gcgggctggc gatcacagtt gcactccccg gatttgccga cgctgcgagc attgcggcgc
      901 agccttacgg caccgacgtc ccaacaaacg agatcaatgc ctttctggcc atttcgccgg
      961 acggcggcgt cctgatccgc tcgccgcaca acgagatggg gcagggcgcc atcaccgcgc
     1021 tgccgatgat cgtcgccgag gagctcgaat gcgactggtc gaaggtgaag gtcgaatatg
     1081 cctcggccga gcgcaatctg cgcgaaaagg aagtctacgg cccgatggcc accgtcggca
     1141 gccgcggcgt gcgcgcttcc tggcaaatgc tgctgcaggc cggcgccagc gcgcgcgaac
     1201 gcctcatcgt ggccgcggca cagcgatgga acgtgccaac ttccgaatgc gaggcagcaa
     1261 acagcaaggt cacccacaag aacacgggcc gcagcttcga gtacggcgaa ctcgccggcg
     1321 atgccggaag gatcaagctc gacaaggagc cggccattcg cacgccggat cagttcaagc
     1381 tgattggcaa gccgctcccc cgcctcgaca ccccgctcaa ggtcaacggc gcggccaagt
     1441 ttgcgatcga cacgcaggtc ccgggcatgg tgtacgcggc ggttgctgcc tgtccggtgt
     1501 ttggcggcaa gctcaaaagc gtcgacgatt caccggcaaa gggccgccgc ggcgtgctgc
     1561 aggt
//
LOCUS       DATDHO010000709         3452 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_33193, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000709 DATDHO010000000
VERSION     DATDHO010000709.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3452
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33193"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..133)
                     /locus_tag="VIY07_13685"
     CDS             complement(<1..133)
                     /locus_tag="VIY07_13685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEY6382842.1"
                     /translation="MTAIWSPETKFRIWFEIEAHAASAMAELGLIPREAAETIWDKGS
                     "
     gene            complement(160..837)
                     /gene="rpe"
                     /locus_tag="VIY07_13690"
     CDS             complement(160..837)
                     /gene="rpe"
                     /locus_tag="VIY07_13690"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEY6382843.1"
                     /translation="MPRPLIIAPSILSADFARLGDEIRAVEAAGADWIHVDVMDGHFV
                     PNITIGPAVTHAIRPLTKKTLDVHLMIAPCDPYLEAFAKAGSDIITVHVESGPHVHRS
                     LQAIRALGKKAGVTMNPATPVSSIEHVIDLVDLVLVMSVNPGFGGQAFIPAAIDKLRE
                     VRALVGARPIDIEIDGGITAENAARVVQAGANVLVAGSAVFKGGNYKANIAAIRNAAA
                     LARGEAA"
     gene            complement(917..1870)
                     /locus_tag="VIY07_13695"
     CDS             complement(917..1870)
                     /locus_tag="VIY07_13695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+-dependent transporter"
                     /protein_id="HEY6382844.1"
                     /translation="MKIIGALAAVLSLAGRHGTLLAATSIFIGLAIPALAAACKPFLG
                     EAIVAMLTLAFLRVDPVDLRRHWSRPGLIAAATAWTMLIVPAVLGLVFLLFRLDQRMA
                     GLYFMLVLQMSAPGLMSSPALAALLGLDVALTLATLIVSMAITPLTASFFTHVYLGTA
                     LASPLAFGIKLFLIIGGCALAAAVIRRLAGQAFVEAQHERIDGLSVLAMSMFAIAAMD
                     GVVDHFRADPLLVIGLTGLAFALALGMLALTALVFLQVGRARAFAIGLIAGNRNVGLM
                     LAATGFAIPDVAWLYFALAQFPIYLLPHLLKPLAKRLSNDR"
     gene            1965..3212
                     /locus_tag="VIY07_13700"
     CDS             1965..3212
                     /locus_tag="VIY07_13700"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018408987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6382845.1"
                     /translation="MARTDAMVLGAGIVGTSVALHLAKRGLSVALVDRAGVGEQTSYG
                     NAGIIEGNTIFPPAFPSDLGALLRIAFKRASEANYQLSFLPRVLPWLLAFHAASQPER
                     LAETARLIRPLFSRAVAEHEALMAEAGATHYLRKTGWLKVYRGDRSFAALSAEFDLAA
                     KFDLPLKVLDTAGARALEPSLNPVFSHAVFWPEAASVSSPLGVTGAYAKRFITLGGII
                     VSGDAQSLHRSGKNWRVETNEGALDAAQCVVALGPWAADLLDRLGLRLPLAVKRGYHR
                     HFRAKGNAGLARPVLDAEVGYLMTPMKQGMRITTGAEFAPRDAPPTPVQFSRITPRAR
                     ELFPLGEMAEHRTWLGSRPCFPDSRPVIGPAPGLAGLWLAIGHAHWGLTLGPATGRLI
                     TEMMAGEQPFCDPAPYRANRFNQ"
     gene            complement(3206..>3452)
                     /locus_tag="VIY07_13705"
     CDS             complement(3206..>3452)
                     /locus_tag="VIY07_13705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="KTSC domain-containing protein"
                     /protein_id="HEY6382846.1"
                     /translation="GCSNGRAAAALSCMSSSAIADIEYDSERGRLTVTFVTGRIYEYV
                     DVPSEVAASFRSAFAKGTFFNSYIRDRYDFREVTPSH"
BASE COUNT          701 a         1050 c         1086 g          615 t
ORIGIN      
        1 tggagccctt gtcccagatc gtctcggccg cttcccttgg gatcagcccc agctcggcca
       61 tggccgaggc ggcgtgcgcc tcgatctcga accagatgcg gaatttcgtt tccggcgacc
      121 agatggcggt catttcgggc cgggagtagc gcgggatcgt cacgccgctt ccccgcgagc
      181 caatgccgcc gcattgcgaa tggcggcgat gttggccttg tagttgccgc ccttgaatac
      241 ggccgaaccg gcgaccagca catttgctcc ggcctgcacc acgcgcgctg cattttcagc
      301 cgtgataccc ccgtcgatct cgatgtcgat cggtcgcgcg ccaaccagcg cgcggacctc
      361 tctcaatttg tcgatcgccg cgggaatgaa ggcctggccg ccaaagccgg gattgaccga
      421 catcacgaga acgagatcga ccaggtcgat cacatgctcg atgctcgaaa caggcgtggc
      481 cgggttcatt gtaacgccgg cctttttgcc aagggcgcga attgcctgaa gggaccggtg
      541 aacatgcggg cccgactcga cgtgcacggt gatgatgtcg gatcccgctt ttgcaaaagc
      601 ttccagataa ggatcgcacg gcgcgatcat taggtggaca tcgagcgtct ttttggtgag
      661 cggccgaatg gcatgggtga ccgcggggcc gatcgtaata ttcggcacaa aatggccatc
      721 catcacgtcg acatggatcc agtccgcgcc ggcagcctca accgcgcgaa tctcgtcgcc
      781 caacctggcg aaatcggcgg aaagaatcga tggcgcaatg atgagcgggc gcggcattca
      841 cgagcctcca gacgccgttc gggtaacacg aggcgggtca acgagcaacg ccgcagccgg
      901 gccgcacagt ggcttgttaa cgatcattcg acaggcgttt tgccagaggc ttcaacaggt
      961 gtggcaacag atagatggga aactgcgcaa gcgcgaaata cagccaggcg acatcgggta
     1021 ttgcaaagcc ggtggcagcc agcatcaggc caacatttcg gtttccagca atcagtccga
     1081 tcgcaaaggc gcgggcgcgc ccgacctgca aaaacaccag ggcggtgagc gcgagcatgc
     1141 cgagcgccag cgcaaaggcc agaccggtga gcccgatgac cagcagcgga tcggcgcgaa
     1201 aatggtcgac gacgccgtcc atggccgcga ttgcaaacat cgacatggcg agcacgctca
     1261 ggccatcgat gcgctcgtgc tgtgcctcga cgaacgcctg tccggccagg cggcggatga
     1321 cggccgcagc cagagcgcaa ccgccgatga tcaggaagag cttgatgccg aatgcaagcg
     1381 gggaggcgag cgcggttccg agatagacat gcgtaaagaa gctggcagtc aacggcgtta
     1441 tcgccatcga gacgatcagg gtggcaagcg tgagggccac atcgagcccc aggagtgcag
     1501 ccagcgccgg cgaggacatc aggcccggcg ctgacatctg cagcactagc atgaaataca
     1561 gaccagccat gcgctggtcg agacggaaga gcagaaacac cagaccgagc accgccggta
     1621 caatcagcat tgtccaggcg gtggcggcgg caatcaggcc gggccgactc caatggcggc
     1681 gcaggtccac agggtccacc cgcaagaagg caagcgtgag catggccacg attgcctcgc
     1741 cgagaaacgg tttgcacgcc gcggcgagag cgggaatggc aagcccgatg aagattgagg
     1801 ttgccgccaa cagcgttccg tgccggccgg ccaagctgag cacggccgca agggcgccaa
     1861 taatcttcat ttgagaaaac tccagcccgc cggtaggtac aaggttgata gcgctcctga
     1921 aggcggcaat ccatatataa gggaacaacg agaggagttc aggcgtggca cgcaccgacg
     1981 cgatggtcct cggcgccggc attgtcggca catcggtcgc cttgcatctc gccaaacgcg
     2041 gtctgagtgt cgccttggtc gatcgcgcgg gcgtcggcga gcagacttcc tatggcaacg
     2101 ccggaatcat cgaaggcaac acgatattcc cgccggcatt tccatccgat ctcggcgcgt
     2161 tgctacggat cgccttcaag cgcgcgagcg aggccaacta tcaattgtcc ttcctgcccc
     2221 gggttctacc ctggttactg gcattccacg ccgcttcgca acccgaacgt ttggccgaaa
     2281 cggcgcggtt gatccgtccg ttgttttccc gcgcagtggc cgaacacgaa gcgttgatgg
     2341 ccgaggccgg tgcgacacac tacttgcgca agacaggctg gttgaaggtt tatcgcggcg
     2401 acaggagttt cgccgccctg tcggctgagt tcgatctggc tgcgaaattt gatttgccgc
     2461 tcaaggtcct cgatacagca ggcgcgcgag cgcttgagcc atcccttaat ccggtttttt
     2521 cgcacgcggt gttctggccg gaagcagcca gcgtcagcag tcctctcggc gtaacgggcg
     2581 cctatgccaa acgctttatc accctcggcg gtatcattgt ttcaggcgat gcccagtcgc
     2641 tgcatcggag cggcaaaaat tggcgtgtgg aaaccaacga aggtgcgctt gacgcggctc
     2701 agtgcgtggt tgctctcggg ccatgggcgg cggatttgct ggaccgcctt ggtctcagat
     2761 tgccgcttgc ggtgaagcgc ggctatcacc gccattttcg ggccaagggc aatgccggcc
     2821 tggcgcgccc ggtgcttgac gccgaagtgg gctatctgat gaccccgatg aagcagggca
     2881 tgcgcatcac cacgggcgcc gaattcgctc ctcgcgatgc gccgccgacc ccggttcagt
     2941 tttcacgcat tacgccacgg gcgcgcgaac tatttccctt gggcgaaatg gccgagcaca
     3001 gaacgtggct cgggagccgg ccgtgctttc ccgattcgcg tccggtgatc ggtcctgccc
     3061 ccggacttgc cggtctgtgg ctggcaatcg gtcatgccca ctggggactc acgcttggtc
     3121 ccgcgacggg tcgcttgatc accgagatga tggcgggcga gcagcccttc tgcgatccgg
     3181 ctccttatcg ggccaatcgt tttaatcagt gagagggcgt gacctcccga aaatcgtagc
     3241 gatccctgat gtaggagttg aagaaggttc ctttcgcaaa agcggaccga aaggaagccg
     3301 ctacctcgct gggaacatcg acgtattcgt agatgcggcc cgttacgaaa gtaacggtca
     3361 aacgcccgcg ctcggaatca tattcgatat cggcgatcgc gctggacgac atacaggaca
     3421 acgccgcggc tgcccgtccg ttcgagcatc ct
//
LOCUS       DATDHO010000710         2207 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_133705, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000710 DATDHO010000000
VERSION     DATDHO010000710.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_133705"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="VIY07_13710"
     CDS             <1..379
                     /locus_tag="VIY07_13710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEY6382847.1"
                     /translation="TKTNAAIVLISHDLGVVAEICDEVAVMYAGEIVEHAPVDALFES
                     PQHPYTIGLLASIPRLDRRVETLATIEGSLPDMSAVPQACRFAARCPFRSEICVSRPP
                     PIVDIGTRHWSRCVKAPLERIVA"
     gene            376..1497
                     /locus_tag="VIY07_13715"
     CDS             376..1497
                     /locus_tag="VIY07_13715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HEY6382848.1"
                     /translation="MSVLLEVEGLTRHFVTRRSPFGRPLATVKAVDGVDLIVPAGSTL
                     ALVGETGCGKSTVGRLILRLIEPMAGDIRFEGRRILSFGEKELRAFRREAQIVFQDPY
                     SSLNPRMTVGELIAEPLALHDIVPAPRRRDRMAELLSLVGLDPRYGQRYPHEFSGGQR
                     QRIAIARALAVEPKLIVCDEPVSALDVSIRSQVLNLLAGLRKRLALTYVFISHDLSVI
                     KHIADRVAVMYLGRIVETSPADELFANPRHPYTRALFSAIPIPQPHSRRQRQLLEGDV
                     PSPLSPPTGCHLHPRCAHAIERCRLERPALVADQNGHATACHRWRELPALSGLGEQEA
                     PGPRLEGLMSEFTRKPGVGANAVAATLHSRGLNGVPERR"
     gene            1516..>2207
                     /locus_tag="VIY07_13720"
     CDS             1516..>2207
                     /locus_tag="VIY07_13720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382849.1"
                     /translation="MKILRWAAIAAAYVALTCGPATAQTTLRIGLAEDPDVLDPTLAR
                     TYVGRIVFASFCDKLFDIDQNLNVVPQLALSHSTSPDGKTVTIKLRPGVKFHDGEPFN
                     AEAAKFSLERHVTMTGSFRKPELAAVDHVDVVDPLTINVVLKSPYSPLIAQFTDRAGM
                     MVSPKAAKEQGDKFGLHPVCAGPYKFVERVQQDRIVFEKFQDYWNKDNVKIDRVVYLP
                     IVDSTVRLANLKS"
BASE COUNT          415 a          699 c          644 g          449 t
ORIGIN      
        1 gaccaaaacg aacgccgcca ttgtcctgat ttcgcacgac ctgggggtcg ttgcggagat
       61 ctgcgacgaa gttgcggtca tgtatgcggg cgagatcgtc gaacatgcgc ctgtcgatgc
      121 attgttcgaa tctccgcaac atccctatac gatcgggctc ctggcctcca ttcctcgcct
      181 tgatcgccgc gtggagaccc tcgcaaccat tgaaggctcg cttccggaca tgagcgccgt
      241 tccgcaagcc tgccgttttg cagcgcgctg tccgttcaga agcgagattt gcgtgagccg
      301 cccaccaccc atcgtggaca tcgggacgag acattggtca cgatgcgtca aggcaccgct
      361 ggaaaggatc gttgcgtgag cgtcctgctc gaggtggaag gcctgacgcg gcattttgtg
      421 acccgtcgct cgccgttcgg acgaccgctg gcgacagtca aagcagtgga cggcgtagat
      481 ctgattgtgc ccgccggcag cacgctcgct ctcgtcggcg agacaggctg tggcaagtca
      541 acggtcggcc ggctgatctt gcggttgatc gagccaatgg caggcgacat ccgattcgaa
      601 ggccgccgca tcctcagttt cggcgaaaag gagctgcgag cctttcgccg cgaagcgcag
      661 attgtttttc aggatcccta ttcatcgctc aatccgcgaa tgacggtggg agaactgatc
      721 gccgagccgc tcgctctgca cgatatcgtt cccgcacccc gccgccgcga ccgcatggcc
      781 gagcttctga gcctcgttgg ccttgacccg agatatggtc aacgataccc gcacgaattc
      841 tccggcggcc agcggcaacg aattgcgatc gcgcgcgcgc tcgcagttga accgaagctt
      901 attgtttgtg acgagccggt gtcggcgctc gatgtttcga ttcgctcgca ggtgctcaat
      961 ctgctcgccg gccttcgcaa gcgccttgcc ctgacttacg tcttcatttc gcacgacctt
     1021 tccgtgatca agcacatcgc cgacagggtc gcggtcatgt acctcggccg catcgtcgag
     1081 acttcacccg cggacgaact gttcgccaat ccacggcacc cctatacccg cgcgctgttt
     1141 tcagcgatcc ccatcccgca gccgcactcc aggcggcaac ggcagctgct ggagggggat
     1201 gttccaagtc ctctttcgcc tccaacggga tgccatcttc acccgcgttg cgcccatgcg
     1261 atcgaacgtt gccggctcga gcggcctgcg cttgttgctg accaaaacgg acatgcgacc
     1321 gcttgccacc gctggcgcga actgcccgct ctgtccgggc tgggcgagca agaggcgcct
     1381 ggcccccggc tcgaagggct aatgtcggaa ttcacccgca aaccgggtgt cggcgccaat
     1441 gctgttgctg ctacacttca ttcgagaggt ctgaacggcg tgcctgaacg ccggtgatta
     1501 cttgcgaggg gaaccatgaa aatcttgcgc tgggccgcaa tcgcggccgc atacgtcgca
     1561 ttgacctgcg ggccggcgac ggctcagaca acgctgcgga tcgggctggc cgaagacccg
     1621 gatgtgctcg atcccacgct cgccaggaca tatgtcgggc gcatcgtctt cgcgtcgttt
     1681 tgcgacaagc tgttcgatat cgatcagaat ctcaatgttg tgccacagct cgcgctgtcc
     1741 cattccacct cgcccgatgg caagaccgtc acgatcaagc tgaggcccgg tgtcaaattt
     1801 catgacggcg agcctttcaa cgccgaagca gccaagttct cgctcgaacg ccatgtgacc
     1861 atgacggggt cgttccgcaa gccggagctg gcggctgtcg atcacgttga tgtggttgat
     1921 cctctcacga tcaacgtcgt gctcaaaagc ccctactcac cactgatcgc gcaattcacc
     1981 gatcgcgcgg ggatgatggt gtcgccgaaa gctgcgaagg agcaaggcga caagtttggc
     2041 ctgcacccgg tctgtgccgg gccttacaag ttcgtggagc gcgtacagca ggaccgcatc
     2101 gtgtttgaaa aatttcagga ctactggaac aaggacaatg tcaagatcga ccgcgtcgtc
     2161 tacctgccga tcgtcgattc aacggtacgt ctcgcaaacc tgaagtc
//
LOCUS       DATDHO010000711         2622 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_183421, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000711 DATDHO010000000
VERSION     DATDHO010000711.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2622)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2622)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2622
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183421"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            61..576
                     /locus_tag="VIY07_13725"
     CDS             61..576
                     /locus_tag="VIY07_13725"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014608.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY6382850.1"
                     /translation="MFEQAIREAMDNASKAITADPDKARVKNASATASLKDRLTLSVT
                     GPNGEAVETDMPKGVGGGGGVPQPGWLLRAALASCTATAIAMRAAKVGIELDKLEVVV
                     ESHSDNRGLLGLDHEVSAALIGLRAKVHIRATNASKNELESIVRWGDAHSPVACTLRS
                     AIATEIEMVVE"
     gene            630..947
                     /locus_tag="VIY07_13730"
     CDS             630..947
                     /locus_tag="VIY07_13730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382851.1"
                     /translation="MPKSLFLVRAVVAEPLRGNFDHWYSTDHLPWAMKVFKCEKAWRF
                     WSEVEQGVHYAVYQFGDKTGLDTALASEEFKELVADFNRSWPEGVTRTRDVVTLIEEV
                     TAQ"
     gene            1015..1461
                     /locus_tag="VIY07_13735"
     CDS             1015..1461
                     /locus_tag="VIY07_13735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2214 family protein"
                     /protein_id="HEY6382852.1"
                     /translation="MTTLFAFLHHVAAFTLVSTLAIELVLLRQELTLAIARRLPIVDA
                     VLGVSAGVLLVVGLLRVFYFEKGADYYFHNHAFLTKLSVFIAVALLSIIPTVEFLSWR
                     KDVRKGQVPAVTEQKLRFLRKVIHGELVAVVIILLSAAVMARGGWV"
     gene            complement(1501..2424)
                     /locus_tag="VIY07_13740"
     CDS             complement(1501..2424)
                     /locus_tag="VIY07_13740"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6382853.1"
                     /translation="MSRVVVAALAATATFWVGSVVAQQPAGPPVGPDFSKVEVKTTDL
                     GNRTYMLVGFGGNSTIAVGDDGVIMVDGQFAPLHDKLKAAIVAVTQQPVRFLVNTHYH
                     RDHVGGNVPFSKDGAVVVAHENVRKRLAEGTTMAVPEVKYTPAPEEALPAITHKEGMT
                     LQVRGRTAQLKHPVNAHTDGDTYVYFADANVLSTGDTVTIGRYPNIDFANGGSINGMI
                     ATADAYLSITDDNSKIVPGHGPLATKAQLAEYRAMLATARDRMAALIKDGKSESDIYA
                     ARPFADLDAKWALNEQAAGNFMRVVYASLKQ"
BASE COUNT          497 a          737 c          804 g          584 t
ORIGIN      
        1 catgtggaga tgccggcgcg gaagcatgac aatttaccgg tgtaaaaaga gagggctgcc
       61 atgttcgagc aggccattcg cgaggcgatg gacaacgcct ccaaagccat cactgccgat
      121 cccgacaaag cgcgcgttaa gaatgcctcg gccacggcct cattgaaaga tcgcctcacg
      181 ctttcggtga cggggccgaa tggcgaagct gttgagaccg atatgccgaa aggcgtgggc
      241 ggcggaggcg gcgtaccgca gccgggctgg ctactgcgcg cggcgctcgc ttcctgcacc
      301 gcaacagcta ttgccatgcg tgccgccaag gtcggcatcg agttggataa gctcgaagtc
      361 gtcgtcgaaa gccattccga caatcggggc ctgctcggcc tcgatcatga ggtgtctgca
      421 gcgctgattg ggttgcgcgc caaagtgcat atccgggcaa ccaatgcgtc aaaaaatgag
      481 ctcgagtcga ttgtccgatg gggcgatgct cattctccag tcgcttgcac cttgcgcagc
      541 gcgatcgcta ccgaaatcga aatggtggtg gagtgacctg aacctgccag cggatggcca
      601 ggcgtcatcg tgaaaaatcc ggtttgatta tgccaaaatc cctttttctc gttcgagctg
      661 tggtcgccga gccgctgcgc ggtaattttg atcattggta ttcaaccgac catttgccgt
      721 gggccatgaa ggtcttcaag tgcgagaaag cctggcgctt ctggagcgag gtcgagcagg
      781 gcgtgcacta tgccgtctac cagttcgggg acaagacagg gctcgatacc gcgcttgcat
      841 cggaggaatt caaggagctg gttgccgatt tcaaccgttc atggccggaa ggcgtgaccc
      901 ggacgcgcga tgtcgtgacc ctgatcgaag aagtcactgc gcagtaatac gaaaaagctt
      961 tgtcttgcgt cgatgtcgtg ccttcctaga ttggaaggac gggaggatgg ccatatgacg
     1021 acgctctttg cctttttgca tcacgtggcg gcgttcacgc tcgtttcgac gctcgccatc
     1081 gaactcgtgc tcctgcgcca ggagctgacg ctcgccatcg cgcgccgctt gccgatcgtg
     1141 gacgcggtgc ttggcgtctc ggccggcgtt cttttagtgg tgggcctttt gcgcgtgttc
     1201 tactttgaga aaggcgccga ctattatttc cacaatcatg ccttcctcac aaaattgtcg
     1261 gtctttatcg cagtcgcctt gttgtcgatc ataccgactg tcgaattcct gtcgtggagg
     1321 aaggacgtga gaaaagggca agtgcccgct gtgaccgagc aaaaattgcg ctttcttcgc
     1381 aaggtcattc atggcgagtt ggtcgcagtt gtcatcattc ttctgtccgc cgccgttatg
     1441 gcgcggggcg gatgggtgta ggaacccccc gcggcggtga gtgccggacg gcagacggaa
     1501 ttactgcttt aggctggcat aaaccacgcg catgaagttg cctgccgcct gttcgttcag
     1561 cgcccatttg gcgtcgaggt cggcaaacgg cctggcggca tagatgtcgc tctcgctttt
     1621 gccgtccttg atcaacgctg ccatgcgatc acgcgctgtc gccagcattg cccggtattc
     1681 ggcaagctgc gccttcgtcg cgagcggtcc gtgcccgggc acgatcttgg aattgtcgtc
     1741 ggtgattgac agataggcgt cagccgtcgc gatcatgcca ttaatgctgc cgccgttggc
     1801 aaagtcgatg ttcggataac ggccgatggt cacggtgtcg cctgtcgata ggacgttggc
     1861 gtcggcgaaa tacacgtagg tgtcgccgtc ggtgtgggca ttcacggggt gcttgagttg
     1921 tgccgtgcgg ccccggacct ggagggtcat gccctctttg tgcgtgatcg caggaagcgc
     1981 ttcttccgga gcgggcgtgt acttgacctc gggcacggcc attgtcgtgc cctcggcgag
     2041 ccgcttacgc acattctcgt gcgcgacaac gacagcgcca tccttgctga agggcacgtt
     2101 cccgccgaca tggtcgcggt ggtagtgagt attcaccaga aaccgcacag gctgctgtgt
     2161 gaccgcgacg attgctgcct tcagcttgtc gtgcagcggc gcgaactggc catcgaccat
     2221 gatcacgcca tcgtcgccaa cggcgatggt gctgttgccg ccaaatccaa ccagcatgta
     2281 ggtgcggttg cccagatcgg tggttttcac ctcaactttt gagaagtccg gaccaactgg
     2341 cggcccggcc ggctgttgcg ccacgacaga accaacccaa aaagtcgccg tggcggctaa
     2401 ggcagcaact acaactctgc tcatggcatt tctcccgacc tggcctgact aaagacgttt
     2461 gagcatagtg aattccccaa ccgcacgcca ttttgcgcga tctgcccgat ccttccgggc
     2521 tatcaaattc acgtcgggac gatatggttg tgggggcgaa ggggggctca tgctgaaaaa
     2581 atgcactgtg acagcgcttt gcgcgtattt gcttatggca gc
//
LOCUS       DATDHO010000712         1769 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_431020, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000712 DATDHO010000000
VERSION     DATDHO010000712.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1769)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1769)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1769
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431020"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1177)
                     /locus_tag="VIY07_13745"
     CDS             complement(<1..1177)
                     /locus_tag="VIY07_13745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018444692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEY6382854.1"
                     /translation="MSHILHRQTYHSYPVAASGQGVTIRDVTGKEYIDASGGAAVSCL
                     GHSHPDVLAAMHEQLDRLAYAHTSFFTTQVAEELADDLIAHAPKDIGHVFFVSGGSEA
                     IEAALKLARQYFVERGEPQRRYIIARRQSYHGVTLGALAVGGRERQRKQFSPLLIETH
                     HVSPAYEYRGRRMDETPKAFGARLAQEFENKIQELGGNNVIGFVAETVVGATLGAVPA
                     VPGYFKHVREICDRHGILLILDEVMCGMGRTGTLHACEQEGISPDLMAIAKGLGGGYA
                     PIGALLMLDKIFDTVADGSGAFQHSHTYMGHPLACAAALAVQRVIRRDNLLANVRAQG
                     AYLSHRLKERFGNHPFVGDVRGRGLFQGLELVSDRNTKEPFDPKLKLHARVKGEAMAR
                     "
     gene            1291..>1769
                     /locus_tag="VIY07_13750"
     CDS             1291..>1769
                     /locus_tag="VIY07_13750"
                     /inference="COORDINATES: protein motif:HMM:NF017215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6382855.1"
                     /translation="MAWRIGIDIGGTFTDVALVEETSGRIGVAKVPTTPEDLTEGVLC
                     ALKLAMSRYDVVPTEVELLSHATTVVTNAILQESGARAALITTRGFRDVLELRRSARA
                     DLYDLFQDAPATLIPRRRRFEITERIGADSTIVAPIAENEINGLIAALKTARVDAVA"
BASE COUNT          363 a          530 c          531 g          345 t
ORIGIN      
        1 cgcgcgccat cgcctcgccc ttcacacgcg catgcagctt cagcttcgga tcgaaaggct
       61 ccttggtgtt gcgatcggag acaagctcga ggccttgaaa caggccgcgt ccgcgcacat
      121 caccgacaaa gggatgattg ccgaagcgct ccttcagccg gtgcgaaaga tacgcgccct
      181 gcgcgcggac attcgccaga aggttgtcac ggcgtatcac ccgctgtacg gccaaagccg
      241 cggcgcaagc cagaggatga cccatgtagg tgtggctatg ctggaaggcg cctgacccgt
      301 cagcaacggt atcgaaaatc ttgtccagca tcaggagggc gccgatcggc gcgtagccgc
      361 caccgaggcc cttcgcgatt gccatcagat cggggctgat cccttcctgc tcgcaggcat
      421 gcagcgttcc cgtgcgaccc atgccgcaca tcacctcatc aagaataagc aggataccgt
      481 ggcggtcgca gatttcgcgg acgtgcttga aataacctgg cactgcaggg accgctccca
      541 gggtggctcc gacgaccgtc tcagcgacaa agccgataac gttgttccca ccgagctctt
      601 gaatcttgtt ttcgaattct tgggctaggc gtgcaccaaa ggctttcggc gtctcgtcca
      661 tacgtcggcc gcgatattcg tatgccggcg atacatgatg cgtctcgatc aaaagtggac
      721 taaattgctt gcgttgccgt tcacggcctc cgactgcgag cgcgccgagc gtgacgccat
      781 gatagctttg acgtcgtgca atgatgtacc gccgctgagg ctcgccccgt tcgacgaaat
      841 attgccgagc gagtttgagc gcagcttcga tcgcctccga tccgccgctg acgaaaaaga
      901 cgtgaccgat gtccttcggt gcgtgagcga tgagatcgtc ggctaactcc tccgctacct
      961 gcgttgtgaa gaaactggta tgcgcataag cgagcctgtc gagttgctca tgcattgctg
     1021 ccagcacatc cggatgcgag tggcccagac aggacaccgc cgcgccgccc gaagcatcga
     1081 tgtactcctt gcctgtgaca tcgcggatgg taacgccttg gccactcgcg gcgacaggat
     1141 aggaatggta ggtctggcga tgaaggatgt ggctcatgat tgccgtgctt gactggcggc
     1201 cccaaaatgc cgtccaaccg atgaaactcc ctgaccaatc ccgagtgtca gtctacaata
     1261 attcctcgac caaaagggag aatacgttgc atggcctggc ggatcgggat cgatattggc
     1321 gggactttca cggacgtagc cttggtcgaa gagacgagcg gacgcatcgg cgtggcaaag
     1381 gtgccgacga cacctgagga tctcaccgaa ggcgtgcttt gcgctctgaa gttggcaatg
     1441 agccgctacg acgtggtccc gaccgaggta gagttgttgt cgcatgcgac gaccgtcgtg
     1501 accaacgcca tcctccagga aagcggcgct cgcgcggcgt tgattacgac gcgaggcttc
     1561 cgcgacgtgc tggaactcag gcgatcggct cgggcagatc tctacgacct gttccaggac
     1621 gctccggcca cgcttatccc gcgccgtcgc aggttcgaga ttacggaacg tatcggtgcg
     1681 gacagcacca tcgtcgcgcc gatcgctgag aacgagatca atggactaat cgccgcgctg
     1741 aagacggcgc gggtcgatgc agttgctat
//
LOCUS       DATDHO010000713         2800 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_79875, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000713 DATDHO010000000
VERSION     DATDHO010000713.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2800)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2800)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2800
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_79875"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="VIY07_13755"
     CDS             <1..372
                     /locus_tag="VIY07_13755"
                     /inference="COORDINATES: protein motif:HMM:NF016301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEY6382856.1"
                     /translation="GEAITAMIVAFCAVIAPAGYILFMLAVLLPARRPPAPHWVDEML
                     RGAELMRPWSMNEVMMLGILVALIKIAELATVEPGIGMYAVGALVILFPAIMVTFDPG
                     EIWQRVEWADDRPPRSGGASR"
     gene            567..1205
                     /locus_tag="VIY07_13760"
     CDS             567..1205
                     /locus_tag="VIY07_13760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009316201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEY6382857.1"
                     /translation="MNAVPLTAAEAGLISCEMCRLLSRPADPAEPGYCPRCGAELVSR
                     RHHSIQYTWALVIAAAICYIPANMLPVLNTTTLGSTDSDTIMGGVVFLYTSGSWPLAL
                     IVLIASVMVPLGKLVALIYLLITVQRGSLGGHRERARLYRMVVFIGRWSMLDVFVDTF
                     TVALVQLSPLMSVEPGPGVLFFAAVVVLTMIAADSFDPRLIWDSSVNREPHG"
     gene            1198..>2800
                     /locus_tag="VIY07_13765"
     CDS             1198..>2800
                     /locus_tag="VIY07_13765"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEY6382858.1"
                     /translation="MAESPDHLPRATVVPRRRQRISVVWIIPILAAVVAIGIAIQRIM
                     SEGPTITIIFKAAQGVEAGKTFIKYKDVNIGQVTAVRLSSDHQNVEVTAKIDKSAAGL
                     MVADAKFWVVEPRVTLSGVSGLSTLLSGNFIGFETGKSDKQQRRFTGLEVPPIITGDQ
                     PGRQFVLKADNLGSLGIGSPVYYRRLQAGQVIAYDLSRDREGVEIKVFINSPYDRYVH
                     AGTRFWSASGIDVSLGAGGIDVRTESLIALLVGGLAFETPPFITTAEPAPANTIFTLY
                     KDQNTAMKQPESVSARYVLHFSESLRGLSVGAPVTFLGLQGGEVTAVGLEIDPATKSL
                     RGRVEIVAYPERLIAQLTAKQAATGEILEQDIQKRRAFVEAMVEKRGLRAQLRSGNLI
                     TGQLYVAFDFFPGARPAKINWSREPVEFPVVPSTVQDIESKLTNIVAKLEKLPLDEIG
                     NDLRKTLVSLDQTLRDAGKAVNRIDTDVTPGLRTTLEDLRGTISSVDRVLNNTDATLV
                     GKDAPAQQELRDALQEITRAARSLRV"
BASE COUNT          550 a          792 c          865 g          593 t
ORIGIN      
        1 ggtgaagcga tcaccgccat gatcgttgca ttctgcgcgg tgattgcccc tgcgggctat
       61 atcctgttta tgctggcggt cttgctcccg gcgcggcggc cgcccgcgcc gcactgggtc
      121 gacgagatgc tgcgcggggc cgagctcatg cgcccctggt cgatgaatga agtgatgatg
      181 ctgggcattc tcgttgcgct gatcaaaatt gccgagctgg ccactgtgga gccgggcatc
      241 ggcatgtacg cggtgggggc actcgtgatt ctctttccag ccatcatggt gacattcgat
      301 ccgggagaaa tctggcagag agtcgagtgg gcggacgacc ggccgccacg gtccggtgga
      361 gcgtcacgtt gagcagataa gaggctcaaa ctcgaagcac gaattccgaa attcgaaaca
      421 atatcaaatg atcaaaagac ccaatgtttc aaatgatttc gattccggaa ggttttggat
      481 ttttggtatt tcgaattttg aaattgtttc ggacttcgtg cttcggattt cggattttga
      541 tcaggtagta catggaaagt agtacgatga acgctgtgcc actgacggct gccgaagcgg
      601 gactgatttc ctgcgagatg tgccgcttgc tgtcgcggcc ggcggatccg gcggagccgg
      661 gctattgtcc gcgctgtggc gcggagctcg tgtcgcgccg ccatcactcc atccagtaca
      721 cctgggcgct cgtcatcgct gccgcgatct gctacatccc ggcaaacatg ttgccggtgc
      781 tcaatacgac cacgctcggt tccaccgata gcgataccat tatgggcggg gtggtgtttc
      841 tttacacctc ggggtcgtgg ccgctggcac tcatcgtgct gatcgccagc gtgatggtgc
      901 ctctcggcaa gcttgtggca ttgatctatc tcttgatcac ggtgcaacgg ggctccctcg
      961 gcggtcaccg cgagcgggcg cgcttgtatc gaatggtagt atttattggg cggtggtcga
     1021 tgctggatgt cttcgtcgat acattcactg tcgctctggt acaactctcg ccgctgatgt
     1081 cagtggagcc cggtccggga gtgctattct tcgcagcagt ggtcgtgcta acaatgatcg
     1141 ccgcagactc tttcgatccc cggctgattt gggattctag cgtaaataga gagccccatg
     1201 gctgaaagcc ccgaccattt gccgcgagcc actgtcgtac caaggcggcg ccagcggatc
     1261 tcggtggtct ggatcatccc gattctcgcc gcggtggtgg cgatcggaat cgcgatccag
     1321 cggatcatga gcgaaggtcc taccatcacc atcattttca aggcggctca aggcgtggaa
     1381 gccggtaaga ccttcatcaa atacaaggat gtgaacatcg gacaagtgac ggcggtgcgg
     1441 ctttcctccg atcatcagaa cgtagaggtg acagcgaaga tcgacaaaag cgcggctggc
     1501 ctgatggtcg cggacgcaaa gttctgggtc gtcgagccgc gcgtgacttt gagcggggta
     1561 tccggcctca gcactctcct ctcgggtaac ttcatcggtt tcgaaacggg caagtcggac
     1621 aaacagcagc ggaggttcac cggcctcgaa gtgccgccga tcatcacagg cgatcagcca
     1681 gggcggcagt tcgtgcttaa agccgacaat ctcggttcgc tggggatcgg ctcaccggtc
     1741 tactatcgtc gccttcaggc ggggcaggtc atcgcctatg acctgtcgcg cgacagggag
     1801 ggggtcgaga tcaaggtttt tatcaattcg ccctatgacc gctatgtcca tgctgggaca
     1861 cgcttctgga gcgcgagcgg gatcgacgtc tcgttgggcg ctggcggaat agacgtgcgc
     1921 accgagtctc taatcgcgct gcttgtgggc ggccttgcat tcgagacgcc gccatttatc
     1981 accacggccg agcccgcgcc cgcgaacacg atatttaccc tatacaagga ccagaacact
     2041 gcaatgaagc agccggagtc cgtctcagcg cgctatgtgc tccatttcag cgaatccttg
     2101 cgcggcctct cagtgggcgc cccggtgacg ttcctggggc tccagggggg tgaggtcact
     2161 gcggttggtc tcgagattga cccggcaacg aagagtctta gaggtcgcgt ggaaatcgtg
     2221 gcctatcccg agcggcttat cgcgcagtta actgcaaagc aagcggcgac cggtgagatc
     2281 ctcgagcagg acatacaaaa gcgccgcgcc ttcgtcgagg ccatggtcga gaaacggggg
     2341 ctgcgggcgc agctccgaag cggcaatctg atcaccgggc agctttacgt cgctttcgac
     2401 tttttcccgg gcgcgcgccc ggcgaagatc aactggagcc gggagccggt agagtttccg
     2461 gtcgttccga gtacagtcca ggatatcgag tccaagctaa ccaatatcgt cgcgaagctc
     2521 gaaaagctgc cgcttgacga gattggcaac gacctgagga aaaccctcgt ctctctcgat
     2581 cagacgttgc gggatgcggg caaggcagtc aaccgcatcg acacagacgt cacccccgga
     2641 ttaagaacta ccctcgaaga tttacggggg acgattagca gcgtcgaccg ggtgctcaac
     2701 aacactgatg cgactctcgt gggtaaggat gcgcccgccc agcaggaact gcgcgacgcc
     2761 ctgcaggaga tcactcgcgc cgcgcgatcg ctgcgcgtcc
//
LOCUS       DATDHO010000714         8055 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_431064, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000714 DATDHO010000000
VERSION     DATDHO010000714.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8055
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431064"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..96
                     /locus_tag="VIY07_13770"
     CDS             <1..96
                     /locus_tag="VIY07_13770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEY6382859.1"
                     /translation="VLFGKWSGTEVKLDGEELLIMKESDIMGVIT"
     gene            129..1772
                     /gene="groL"
                     /locus_tag="VIY07_13775"
     CDS             129..1772
                     /gene="groL"
                     /locus_tag="VIY07_13775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475125.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY6382860.1"
                     /translation="MAAKGVKFSGDARERMLRGVDTLANAVKVTLGPKGRNVVLDKSF
                     GAPRITKDGVTVAKEIELEDKFENMGAQMVREVAQKTNDMAGDGTTTATVLAQAIVKE
                     GAKSVAAGMNPMDLKRGIDIAVNAVVKDIEKRAKKVGSSAEVAQVGTISSNGDAKIGQ
                     MIAKAMQKVGNEGVITVEEAKALETDVEIVEGMQFDRGYISPYFITNAEKMLAELEDA
                     YILLHEKKLSGLQSMLPVLEAVVQSGKPLVIIAEDVEGEAIATLVVNKLRGGLKVAAV
                     KAPGFGDRRKAMLEDIAILTGGQLISEDLGIKLENVTTAMLGRAKKVIIEKEKTTIVH
                     GAGKKADIEARVQQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEK
                     KDRVEDALNATRAAVEEGIVPGGGVALLRAKKAVGRIQDENPDIQAGINIVLKALESP
                     LRQIAENAGAEASLVVGKIMDEKSETYGFDAQEEKYVDMIDAGIVDPAKVVRTALQDA
                     ASVAGLLVTTEAMVAEVPKEPAPAMPAGGMGGMGGGMGF"
     gene            complement(1821..2987)
                     /locus_tag="VIY07_13780"
     CDS             complement(1821..2987)
                     /locus_tag="VIY07_13780"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY6382861.1"
                     /translation="MIGGGIGGLVAAIALRERGFEPVVFEQAGELKEVGAGIQITPNS
                     TKILRAIRLEDAVRRHGFEPGFMLTRDMTTGEILFRTQAKGAMAERFGASWFQIHRAD
                     LLEILIAALDGADIRLKARCVGVGPVDDGAIVEISGGQRERFDVVVGCDGIHSTVRAI
                     LHGQQNVRFTGNMCWRALIPVNALPENHLEPVMNYWMGRRGHVVAYFVRGGTLVNLVV
                     VTETDNWVEESWSVEGRRQDMLSAFPKSHRDLRVLLERVERCFKWGLFDRDPLPQWGR
                     GRVTLLGDAAHPMLPFLSQGAASAIEDGYVLARELARAPFDPDAALSAYEAERRPRTA
                     RIQLAARAQGEVFHLHSPWARLKRVLRLDRFEKPKADLLSKDWIYSYDPIVSYQ"
     gene            complement(2984..3409)
                     /locus_tag="VIY07_13785"
     CDS             complement(2984..3409)
                     /locus_tag="VIY07_13785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382862.1"
                     /translation="MRIIHLNAERRIIASAALATILSSGIATAVDQFPIEQELLLDAA
                     PMRPGKRMPILTVESSGNANIDLWCKTVSARVDISGSTIKIEPGPLPEGLPEMLSAGQ
                     CTPERIKADEKLLADFAQVTAWQRENGGIVLLGQSRASR"
     gene            complement(3727..3900)
                     /locus_tag="VIY07_13790"
     CDS             complement(3727..3900)
                     /locus_tag="VIY07_13790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382863.1"
                     /translation="MLTTLITGIIGIAMVVAFLGFMLVWVKAVPLIIIVIVAVALLVY
                     DFIQTLRAGESGA"
     gene            complement(3942..5288)
                     /locus_tag="VIY07_13795"
     CDS             complement(3942..5288)
                     /locus_tag="VIY07_13795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY6382864.1"
                     /translation="MMSLAALSLKEAAAEIRAGRITSAELVADCLKRIEEVDAGIEAW
                     AFLDRDYAMRQAAAADDHRRQGKATGPLHGVPVGIKDIFDTGDMPTEFGSPVWSGRTP
                     RRDAAVVACLRAAGAVIMGKTVTTEYAYFHPGKTRNPHDKTRTPGGSSSGSAAAVAAH
                     MVPGAIGSQTNGSVIRPASFCGVVGFKPSHGLIPRSGALMLSRTLDHVGMFARSVEDA
                     AVLAEVLAGFDEDDPDTRPLAHPPFFAVAESEPPLPPRFAFVRSAVWDRAEPVTHEAF
                     VELVETLGESASEVGLGSAFDRAIDFQRVVMEVEMSHNLHRDYEKAGDKLSAALREVI
                     ERGRTYPAVDYLRATSAIAPLNETLEEVFNEYDAILTPAAPGAAPAIDTTGNPIFCST
                     WTYLGTPAVTVPLLSSEDRLPIGVQLVGRRGNDARLLRTARWLVKTLQAGERRGSS"
     gene            complement(5320..6669)
                     /locus_tag="VIY07_13800"
     CDS             complement(5320..6669)
                     /locus_tag="VIY07_13800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6382865.1"
                     /translation="MTDPQVGMLMLFLFIFIIMLGFPIAFTLMAMGLGFGFYAYYVPG
                     QEIFQNRIFVLLVSKAFEVMSNDVLTAVPLFLFMGYVVERANILDRLFHSLQISMKNI
                     PGALAVATLVTCAMFATATGIVGAVVTLMGLLAFPAMLRAGYDVKLSAGVVCAGGCLG
                     ILIPPSILLIVYAATAGISAVKLYAAAFIPGFILTGFYIGYVILRALLNPSLAPKLPK
                     EQTDIPFSQVMWALLTAFLPLALLIICVLGAILFGLATPSEAAGIGALGGLVLAAAYG
                     ALRFDLLKESVFLTARATAMVCYLFIGSWTFSSVFAVLGGQGVVERFFLDMNLSTTGF
                     LLLTQVIIFLLGWPLEWTEIIIIFVPIFLPLLDDFHVDPIFFGILVALNTQTAFNTPP
                     VAMAAFYLKGVAPKSVELMDIFRGALPFVFMVFMTMALVYIFPNIALWLPDYLYTPR"
     gene            complement(6666..7295)
                     /locus_tag="VIY07_13805"
     CDS             complement(6666..7295)
                     /locus_tag="VIY07_13805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease subunit"
                     /protein_id="HEY6382866.1"
                     /translation="MKSFLFFIDSLSLWTGKAFSWLILVLTLGVSYEVFVRYVLSAPT
                     TWAFDFSYITYGALFLMAGAYTLSRNGHVRADVIYRFLKPRTQASLDLVLYIIFFLPA
                     VAAFMYTGYIYAEMSVRFREVSIFSPAGVPVFPLKTLIPITGLLLLLQGIAEIIRCVL
                     CIRESTWPARLHDVEETESVIIHETQYKQERGEGDEIAKPLPGHKGTGA"
     gene            complement(7390..>8055)
                     /locus_tag="VIY07_13810"
     CDS             complement(7390..>8055)
                     /locus_tag="VIY07_13810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter"
                     /protein_id="HEY6382867.1"
                     /translation="VSFLYGPMPTQPLGWFKKPIASANDLKGMKYRTVGLAADLFQAM
                     GASVAQLPGGEIVPAMERGVIEGFEFNNPTSDRRFGAQDVAKYYMLGSHHQATEYFEI
                     MFNRTKFNALPKELQAILQYGAEAVSSANEWKGFDYYSKDLQELISKDKVNVMRTPQS
                     VFDAQIKAWDGLITELEKDPFNKKVMDSQKAWVRRVVYYTQLNATDYKGAFNHHFPGV
                     LKT"
BASE COUNT         1787 a         2396 c         2442 g         1430 t
ORIGIN      
        1 gtgctgttcg gcaagtggtc gggcaccgaa gtcaagctcg acggcgagga actcctgatc
       61 atgaaggagt ccgacattat gggcgtgatc acctgacatc gcatcaaaat ccaatggagt
      121 gatttgaaat ggctgcaaaa ggcgtgaaat tttcgggcga cgcgcgcgag cgcatgctgc
      181 gtggcgtgga tactctcgcc aacgcggtga aagtcaccct cgggccgaag ggacgcaatg
      241 tcgtgctcga caagagcttc ggcgcgccgc gcatcaccaa ggacggcgtg actgtcgcca
      301 aggaaatcga gcttgaggac aagttcgaga acatgggcgc ccagatggtg cgcgaagtcg
      361 cgcagaagac caacgatatg gccggcgacg gcaccacaac cgcgactgtg ctggctcagg
      421 caatcgtgaa ggaaggcgcc aaatctgtcg ccgccggcat gaacccgatg gatctcaagc
      481 gcggcatcga cattgctgtc aatgccgtcg tcaaggacat tgagaagcga gccaagaagg
      541 tgggttcgtc agcggaagtc gcgcaggtcg gcaccatttc ttccaacggc gacgccaaga
      601 tcggccaaat gattgcgaaa gcgatgcaga aggtcggaaa cgaaggcgtc attacggtgg
      661 aggaagccaa ggcgctcgaa accgacgtcg agatcgtcga gggaatgcag ttcgatcgcg
      721 gttacatctc cccgtatttc attacgaatg ccgagaagat gctggccgag ctcgaagacg
      781 cctatattct actccacgag aagaaacttt ccggtctgca atcgatgctg ccggtgctcg
      841 aagcagtcgt gcagtcaggc aagccgctgg tgatcatcgc cgaggatgtc gagggcgaag
      901 cgattgccac gttggtcgtc aacaagctgc gtggcggcct gaaggtggcc gcggtgaagg
      961 ccccgggatt cggcgatcgc cgcaaggcaa tgctcgagga cattgcaatc ctcaccggcg
     1021 gtcagctgat ctccgaagat ctcggcatca agctcgagaa cgtcacgacc gccatgctcg
     1081 gccgcgccaa gaaagtgatc atcgagaagg aaaagaccac catcgtgcac ggcgccggca
     1141 agaaagccga cattgaagcc cgggtgcagc agatcaaggc gcagatcgaa gagacgacct
     1201 ctgactacga cagggaaaag ctgcaggagc ggctggccaa gctcgccggc ggcgtggccg
     1261 taatccgcgt cgggggggca accgaagtcg aggtgaagga aaagaaggat cgggtcgaag
     1321 acgcgctcaa tgcgacgcgc gccgcagtcg aggaaggcat tgttcccggc ggcggcgtgg
     1381 cgctgctgcg ggccaaaaag gccgtcggcc gcatccagga cgaaaacccg gatatccagg
     1441 ccggtattaa tatcgtcctc aaggcgctgg aatcgccact ccgtcagatt gcagagaatg
     1501 ccggagcgga agcctccctc gtcgtcggca agatcatgga cgagaagtcg gaaacctacg
     1561 gtttcgacgc tcaggaggag aaatatgtcg acatgatcga cgccggcatt gtcgaccccg
     1621 ccaaggtcgt gcgcacggcg ttgcaggatg cggcctcggt tgcgggtctt ctcgtgacca
     1681 cggaggccat ggtcgccgaa gtgccaaagg agcctgcccc cgcaatgccg gctggcggca
     1741 tgggtggcat gggcggtgga atgggtttct aaaccccctc gacgcaagtg cggagggcgc
     1801 agcgggagct gcgccctctt ttattggtat gacacgatcg ggtcgtagct gtagatccaa
     1861 tccttgctca gcagatccgc cttgggtttt tcgaagcggt cgaggcgcag gacgcgcttg
     1921 aggcgcgccc atggcgaatg tagatggaag acctcaccct gcgcccgtgc cgcaagttgg
     1981 atcctggccg tgcgcggtcg ccgctcggct tcgtaggcgg aaagcgcggc atcgggatcg
     2041 aacggcgcgc gcgcaagctc gcgcgcaagc acgtagccgt cctcgattgc tgacgcagcg
     2101 ccttgcgaca aaaacggcag catcggatgg gcggcatcgc ccagcagcgt aacgcgccct
     2161 cgcccccact gcggcaaggg atcccggtcg aacagacccc acttgaagca tcgctcgacc
     2221 cgttcaagca gaacccgaag gtcgcggtgc gacttcggaa atgccgacag catatcttgg
     2281 cgtcgaccct caaccgacca ggactcctct acccaattgt ctgtctctgt tactaccacg
     2341 aggttgacca gtgtgccgcc gcgcacaaag taggcaacga catggccgcg ccggcccatc
     2401 cagtaattca tcacgggctc gagatgattc tcaggcagtg cgttgaccgg gatcagcgca
     2461 cgccagcaca tgttgccggt aaagcgcaca ttttgctggc catgaagaat ggcgcgcacc
     2521 gtcgaatgaa tcccgtcgca tcccaccacg acatcgaagc gttcgcgttg gcccccactg
     2581 atctcgacga tcgcaccatc gtcaacgggc ccgactccga cgcagcgggc cttcagccta
     2641 atgtcggctc catccagcgc ggcgatcaaa atttcaagaa gatcggcacg atgaatttga
     2701 aaccagctgg cgccgaaccg ctcggccatg gcgcctttgg cttgagtgcg aaataaaatc
     2761 tccccggtcg tcatgtcgcg tgtaagcatg aaaccaggct caaaaccgtg tcggcggacg
     2821 gcatcttcga gccggatcgc acgcaagatc ttcgttgaat tgggcgtgat ctggatgccg
     2881 gcgccgactt ctttcagctc gcctgcttgc tcgaagacga cgggctcaaa cccgcgctcg
     2941 cgcaatgcga tggcggcgac cagcccaccg atcccgccgc cgatcaacgc gatgcgcggc
     3001 tttgccctaa aagcacgatg cctccgtttt cccgttgcca cgcggttacc tgagcaaaat
     3061 cggcgagcag cttttcgtcc gccttgattc gctccggcgt gcattgtccg gcgctcaaca
     3121 tttcgggcaa gccctccggc aatggacccg gctctatctt tatagtgctg ccggaaatgt
     3181 ccacacgcgc ggacacggtt ttgcaccaca ggtcgatgtt cgcattccca ctcgactcaa
     3241 cggtcaaaat tggcattcgc ttgccaggcc gcatcggtgc ggcgtcgagc aaaagttcct
     3301 gctcgatagg gaactgatca acggcggtgg cgatcccgga actcagaatt gtggcaagcg
     3361 cagcactggc aatgattctc cgctctgcgt tcaggtgaat gatgcgcatc gatgttctcc
     3421 ggtacggcaa agcgctttcc cgacattttg gatgcaagct ggcaagaacg ccgtcaagta
     3481 actgcggcaa tgtgcgcgcc gtgaaattta ttcggttgct tgcgtccgga ataaaccccc
     3541 ggcgcgcaga taggcacagg aaccctgggc gttaacgaga acgttatttg cgtttgcctt
     3601 ggagccggct tcttgaatct ccgctttttc gtcgacgacg cgagtgaaat gttccagatg
     3661 aaggcaaggc cgacgttcca ggtcgacagg atgcgccgtc gcggcggatg tacgaaaaag
     3721 ggtcagtcac gcgccgcttt cgccggcgcg taaggtctgg atgaagtcgt agacaagcaa
     3781 tgcgaccgca acgataacga tgatgatcag tgggacagct ttgacccaaa ctaacatgaa
     3841 gccgagaaac gccaccacca tggcgatccc aatgatgcct gtgatcagag tggtgagcat
     3901 ggcgtctatc ctttcttacc gccgcgccgt cgggaccttc cctaagatga cccgcggcgt
     3961 tcgcccgctt gcagtgtttt gacaagccag cgcgcggtgc gcaagaggcg cgcgtcgttg
     4021 ccgcggcgac ctaccagctg cacgccgata ggcaacctgt cctcggaact caggagggga
     4081 acggtcacgg ctggcgtccc aagataagtc caggtcgaac agaaaatcgg gttgcccgtg
     4141 gtatcgattg ccggcgccgc gcccggtgcg gccggtgtga ggatggcgtc gtattcgttg
     4201 aacacctctt ccagcgtctc gttgagcggc gcgatcgctg acgtcgcccg cagataatcc
     4261 accgcaggat aagtgcgacc acgctcgatc acctcgcgca gggccgcgct caacttgtcg
     4321 ccggccttct cgtaatctcg atgcagattg tgcgacattt cgacttccat cacgacgcgt
     4381 tgaaaatcga tggcgcgatc gaatgcggaa ccgagcccaa cttcggatgc cgattccccg
     4441 agcgtttcta cgagttcgac gaaggcttca tgcgtcaccg gctcggcccg atcccagact
     4501 gcagagcgca cgaaggcaaa gcgcggcggc agtggcggct cactttcggc tacggcgaag
     4561 aacggcggat gcgccaacgg gcgggtgtcg gggtcgtcct cgtcgaaccc ggctagcacc
     4621 tcagccaaca cggcggcatc ctcgacgctg cgcgcgaaca tgccgacgtg atcgagggtg
     4681 cgcgacagca ttagcgctcc actgcgcggg atcaacccgt ggctcggctt gaacccaacc
     4741 acgccacaga aggaagctgg ccggatcacc gagccgttgg tctgcgagcc aatcgcgccc
     4801 ggcaccatat gggcggcgac cgccgccgcc gagccgctgg aggagccgcc gggcgtgcgc
     4861 gttttgtcgt gtggatttct tgtcttgcct ggatggaaat acgcatattc cgtggtcacg
     4921 gtcttgccca tgatcacggc gccagcggcg cgcagacaag ccactaccgc cgcgtcccgg
     4981 cgcggcgtgc ggccggacca gaccggggag ccgaattcgg tcggcatgtc accagtgtcg
     5041 aaaatgtcct tgatcccgac cggcacgcca tgcagcggcc cggtcgcctt gccctgccgg
     5101 cgatgatcat cggcggccgc ggcctggcgc atagcatagt cgcgatcgag aaacgcccag
     5161 gcctcaatgc cagcatcgac ctcctcgatg cgcttgaggc aatcggccac aagctcggcc
     5221 gaagtaatgc ggccggcgcg gatctcggcc gccgcttcct tgagcgagag cgcggccaga
     5281 ctcatcattc acactccccg gtcaggcaat ttgcgcccgt catcgcggcg tgtagagata
     5341 atccggcagc cacagcgcga tgttgggaaa gatatagacc agcgccatgg tcataaagac
     5401 catgaatacg aatggcagcg caccccggaa gatgtccatc aactccacgg atttcggcgc
     5461 cacgcccttg agatagaagg cggccatcgc caccggtggg gtgttgaagg ccgtctgcgt
     5521 gttgagcgcg accagaatgc cgaagaagat cggatcgacg tggaaatcgt cgagcagcgg
     5581 caggaaaatc ggcacgaaga tgatgatgat ctcggtccat tccagcggcc agccgagcag
     5641 gaagatgatg acctgggtga gcagcaggaa gccggtcgtc gacaggttca tatccaggaa
     5701 gaagcgctcg accacgccct gcccgccgag caccgcgaat accgacgaaa acgtccacga
     5761 gccgatgaac agatagcaga ccatggcagt ggcgcgcgcg gtcaggaaca ccgattcctt
     5821 cagcagatcg aagcgtaaag ccccgtaagc ggcggccagc acaaggccgc cgagggcgcc
     5881 gatgccggcg gcttccgatg gcgtcgccag accgaacagg atggcgccca gcacgcagat
     5941 gatcagcaat gcgagcggca agaacgccgt caacagggcc cacatgacct gactaaacgg
     6001 gatatccgtc tgctctttcg gtagcttggg agcaagcgaa ggattgagca aggcccgcaa
     6061 aatcacgtag ccgatgtaaa atcccgtgag gatgaatccc ggaatgaagg cggccgcata
     6121 cagcttgacc gcggatattc cggcggtggc cgcatagacg atcaacagga tgcttggcgg
     6181 gatcagaatg cccaagcagc cgccggcgca aaccacaccg gctgagagtt tgacgtcata
     6241 gccagcgcgc aacatggcag ggaaagccag cagccccata agcgtcacca cggcgcccac
     6301 tataccggtg gcggtcgcaa acatcgcgca ggtcaccagc gtcgccacgg caagtgcgcc
     6361 gggaatgttc ttcatcgata tttgcagaga gtgaaacagg cggtcgagga tgttcgcgcg
     6421 ctcaaccacg tatcccatga acaaaaatag cgggaccgcg gtgagcacgt cattcgacat
     6481 cacctcgaac gccttcgaca ccagaaggac gaatatgcga ttctggaata tttcctgacc
     6541 gggcacgtag taggcataga agccgaagcc cagccccatc gccatcaggg tgaaggcaat
     6601 tgggaatcca agcatgatga taaagatgaa gagaaacagc atcaacatgc cgacttgcgg
     6661 atcggtcatg ctccagtccc tttgtgcccc ggcagcggct ttgcgatctc gtcgccctcg
     6721 ccgcgctctt gtttatattg tgtctcgtga atgatcaccg attcggtttc ttccacatcg
     6781 tgcaggcgcg ctggccaggt gctttcgcga atgcacagaa cgcaacggat gatctcggcg
     6841 atcccctgca gcaacagcag caagccggta atcgggatca aagtcttgag cggaaagacc
     6901 ggtaccccgg ccgggctgaa aatgctcacc tcacggaaac gaaccgacat ttccgcatat
     6961 atatagcccg tatacatgaa ggctgcgacc gccggcagga agaagatgat atagagaacg
     7021 agatcgagac tcgcctgcgt gcgcggtttc agaaaccggt agatgacgtc ggcgcgtaca
     7081 tggccgttgc gcgacagcgt ataggcgccg gccatcagga acagtgcgcc gtaggtgatg
     7141 tagctgaaat cgaaggccca ggtagtcggc gccgataaaa catagcgcac gaacacctcg
     7201 tagctgacgc cgagcgtcag cacgaggatc agccaggaga aggccttccc tgtccacaag
     7261 ctgagcgaat cgatgaagaa gagaaagctt ttcatgccga accagcccag cttccgcgat
     7321 ctccacggat ttcgggcggc gccggttacg ccgcccgttt cgcaattgcg gcaattgccg
     7381 cagatatggt cacgtcttca gtactccagg gaagtgatgg ttgaaggcgc ctttgtaatc
     7441 ggttgcattc aactgcgtat agtaaaccac acgcctcacc caggccttct gcgagtccat
     7501 caccttctta ttgaagggat ccttctcgag ctcagtgata aggccgtccc aggccttgat
     7561 ctgggcatcg aacacgcttt gcggggtgcg catgacattg accttgtcct tcgagatcag
     7621 ttcctgcagg tccttcgagt aatagtcgaa tcccttccac tcgttggcgg aggagacggc
     7681 ctcggcgcca tattgcagaa tcgcctgcag ctccttcgga agcgcgttga acttcgtgcg
     7741 gttgaacatg atttcgaaat attccgtcgc ctgatggtgg ctgcccaaca tgtagtattt
     7801 ggcaacgtcc tgcgcgccga aacggcgatc cgaggtcggg ttgttgaact cgaagccctc
     7861 aatcacgccg cgctccatgg ccggaacgat ttcaccaccc ggaagctgcg cgaccgaggc
     7921 acccatcgcc tgaaacaggt ccgccgcgag accgacggta cgatacttca tgcccttgag
     7981 atcattagcc gaggcgatcg gcttcttgaa ccaaccgagc ggctgggtcg gcatcgggcc
     8041 atacaagaag gagac
//
LOCUS       DATDHO010000715         2699 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_183682, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000715 DATDHO010000000
VERSION     DATDHO010000715.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_183682"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VIY07_13815"
     CDS             <1..456
                     /locus_tag="VIY07_13815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HEY6382868.1"
                     /translation="SASDGAAGSVSGLPIPRFVSLKSDRVNARSGPNKDQEVRWVYTH
                     AGMPVEITAEFENWRRIRDWEGAEGWVYHSLLSGRRTATVVPKSKEELVPLFDIADVK
                     SPIAAHLQSGVLGAIKSCNGTWCQFSGKGFDGFIRQERLWGAYPNEKVE"
     gene            complement(558..1043)
                     /locus_tag="VIY07_13820"
     CDS             complement(558..1043)
                     /locus_tag="VIY07_13820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HEY6382869.1"
                     /translation="MALTRTVVIPNKAGAERSLDRSALTGCPWHDVKAMLREVGLRPT
                     RQRMALGWILFGKGDRHLTAEMLYEEATRAKVPVSLATIYNTLHQFTEVGLLRQVAVD
                     GTKAYFDTNVTAHHHFFVEGEDELLDIPDAEVLVGKTPTPPEGFEIARIDVVVRLRRK
                     S"
     gene            1289..1822
                     /gene="fabA"
                     /locus_tag="VIY07_13825"
     CDS             1289..1822
                     /gene="fabA"
                     /locus_tag="VIY07_13825"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabA"
                     /protein_id="HEY6382870.1"
                     /translation="MDARRHSFEYEDLLACGRGELFGAGNAQLPLPPMLMFDRIAEIS
                     EDGGEHGKGMIRAELDVKPDLWFFLCHFKGDPVMPGCLGLDALWQLVGFFLGWLGAPG
                     KGRALGLGELKFSGQVLPTVKKVIYGIDIKRVMRSKLVLGIADGWLSADGNVIYRAND
                     LKVGLFKQDEALQPSGA"
     gene            1915..>2699
                     /locus_tag="VIY07_13830"
     CDS             1915..>2699
                     /locus_tag="VIY07_13830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEY6382871.1"
                     /translation="MRRVVVTGMGIVSSIGNNTQEVLASLREAKSGIVRAEKYAELGF
                     RCQVHGAPRLDPDEVVDRRAMRFLGGGAAWNHIAMEQAIRDSGIEEKEISNERTGIVM
                     GSGGPSCRAIIEAADTARSKGPKRVGPFAVPKAMSSTASATLATWFKIKGVNYSISSA
                     CATSNHCIGNAAELIQWGKQDVIFAGGCEELDWSLSVLFDAMGAMSSKFNATPEKASR
                     AYDKDRDGFVIAGGAGVLVLEELEHAKARGAKIYAEVAGYGATS"
BASE COUNT          533 a          784 c          846 g          536 t
ORIGIN      
        1 tctgccagcg atggcgccgc cggctccgtc agcgggcttc caattccaag attcgtgagc
       61 ctcaaatccg atcgcgtcaa tgcgcgatcc ggcccgaaca aggatcagga ggtacgctgg
      121 gtctataccc acgccggcat gcctgtggaa atcacggctg aattcgaaaa ctggcgtcgg
      181 atccgcgact gggaaggcgc ggaaggatgg gtctatcact ctcttttgtc aggcaggcgg
      241 acggcgacgg tcgtgccgaa gtcaaaggag gagctggttc ccctctttga cattgcggac
      301 gtcaaatcgc cgattgcggc gcacctgcag tccggcgtgc ttggcgcgat caagtcttgc
      361 aacgggacat ggtgccagtt tagcggcaaa ggcttcgacg gcttcattcg ccaggagcgg
      421 ctttggggag cttatccgaa cgagaaggtt gagtaggttt caggagtgcc cggccaggcc
      481 aagtgatgat gcttcggtcc tcgagctcgt tgcgcccgcg gcaatcgcga caatttctga
      541 tttgtggtgt gcggtgacta ggacttccgg cgcaaacgta cgacaacgtc aatgcgcgcg
      601 atctcaaagc cttccggcgg ggttggcgtt ttgccaacga gcacttcggc gtccgggata
      661 tccagcagct catcctcgcc ttccacgaag aaatgatgat gtgctgtcac attggtgtcg
      721 aaatacgcct tggttccgtc gaccgcgacc tgccgcagca gaccgacctc ggtgaactgg
      781 tgcaatgtgt tgtaaatcgt ggcgagagac accggcactt tggcgcgggt ggcttcttcg
      841 taaagcatct cagcggtgag atggcgatcg cccttgccga acaggatcca gcccagggcc
      901 atgcgctgac gggtagggcg caacccgacc tcccgcagca tagctttgac gtcgtgccac
      961 gggcagccgg tcagcgccga ccgatccagt gagcgctcgg cgccagcttt gttcggtatt
     1021 accacggtac gcgtcagagc catttcttct cgtgcctaga cagccagccc caagacggag
     1081 ccggccaaat ccgtttcagt cgcaacatat acgaaatcgg cctcctagat gcaaccgcat
     1141 cgcaactgaa agcagccggt ttcgcggcct ccggcggcga tagcgcttcc atagcccgcg
     1201 gttccgccat ctttgcccgc tagctttggt gtgttaccta ctcggcatgg caagtcagtc
     1261 aggcctcttg catggagaag cgacgccagt ggacgcgcgg cggcatagct tcgagtacga
     1321 agatttgctc gcctgcggcc gtggcgaact gttcggtgcc ggcaatgcgc agctgcccct
     1381 gcctccgatg ttgatgttcg accggattgc cgaaatcagc gaggacggcg gtgagcatgg
     1441 caagggcatg attcgcgctg agctcgatgt gaagccggac ctgtggttct tcctgtgcca
     1501 cttcaaaggc gatccggtga tgcctggatg tctggggctc gacgcacttt ggcaattggt
     1561 tgggtttttc ctcggctggc tgggcgcgcc cggcaagggc agggctcttg gattgggcga
     1621 gctcaaattt tccggccagg tgctgccgac cgtcaaaaaa gttatctatg gcatcgatat
     1681 aaagcgagtc atgcgctcga aacttgtgct cggcatcgcc gacggctggc tttcggccga
     1741 tggcaacgtc atataccgcg ctaacgatct caaagttggc ctcttcaaac aggacgaggc
     1801 tctacagccc agtggtgcct gagcccggcg gagggccttg cagaactacg caattggcca
     1861 atctgtggcc caatcaacag caaacgcggc gagattttta agggtcatac gattatgcga
     1921 cgggtcgtcg tcaccggaat ggggatcgtc tcctcgatcg gcaacaacac gcaggaagtg
     1981 ctggcaagtc tgcgcgaggc caaatccgga atcgtgcggg cggaaaaata cgccgagctg
     2041 ggattccgtt gccaggtcca tggtgcgccg cgtctcgatc ctgacgaagt tgtcgaccgc
     2101 cgcgccatgc gcttccttgg cggcggcgca gcgtggaatc acattgctat ggagcaggcg
     2161 atccgcgact ccggcatcga ggaaaaggaa atttcgaatg agcgcaccgg gatcgtgatg
     2221 ggctccggcg gcccttcgtg ccgcgccatc atcgaagccg ccgacaccgc gcgcagcaag
     2281 ggccccaagc gcgtaggtcc gttcgcagtg ccgaaggcaa tgtcgtcgac ggcgtcggcg
     2341 acgctcgcaa cctggttcaa gatcaagggc gtcaattatt caatctcctc ggcctgcgcc
     2401 acctccaatc attgcatcgg taacgccgcc gagctgatcc aatggggcaa acaggacgtc
     2461 atcttcgccg gcgggtgcga ggagctggac tggtcgctgt ccgtgctgtt cgatgccatg
     2521 ggggcaatgt catcgaaatt caatgctacg ccggaaaaag catcgcgcgc gtacgacaaa
     2581 gatcgcgacg gcttcgtgat tgccggcggc gccggcgtgc tggtgctgga agaactcgaa
     2641 cacgcgaaag cgcgcggtgc gaagatctac gccgaagtgg ccggctacgg cgcaacgtc
//
LOCUS       DATDHO010000716         1823 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_332204, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000716 DATDHO010000000
VERSION     DATDHO010000716.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1823
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332204"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VIY07_13835"
     CDS             <1..464
                     /locus_tag="VIY07_13835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495540.1"
                     /note="FabF, beta-Ketoacyl-ACP synthase II, KASII;
                     catalyzes a condensation reaction in fatty acid
                     biosynthesis: addition of an acyl acceptor of two carbons
                     from malonyl-ACP; required for the elongation of
                     short-chain unsaturated acyl-ACP; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HEY6382872.1"
                     /translation="GEMTDAFHRTRSSPDGKPIIGCIANAINDAGLTPNDIDYVNAHG
                     TSTPENDKMEYLGCATVFGERMKTLPISSNKSMIGHTLSAAGAVEAVFTLLTLQQQRI
                     PPTINYAVPDPAIPLDVVPNEARDANLRHAISNSFGFGGQNVSLVMGLEPA"
     gene            492..1514
                     /locus_tag="VIY07_13840"
     CDS             492..1514
                     /locus_tag="VIY07_13840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEY6382873.1"
                     /translation="MRALRLIADRKIELADVPPPPPPGAGEVQIRVKAVALNHLDLWG
                     FRGMAFAKRQLPLIVGAEASGEIAAVGSGVSAFVPGDKVVMYGAMTCGKCPACRDGRD
                     NLCENVGGIMGFHIDGFARELINLPARLVISVPKGVSLRDAACAPIAFATVEHMLFDN
                     AKLKPGETILVHAGGSGIGSAAIKMAKALGCTVITTVGDDTKADKAKALGADHVINYK
                     TERFEGVTRKLTGKKGVDVVFEHVGGEGFNGSLLCLKRGGRLVTCGSTAGPSVTINLM
                     QLFQQQYKILASFGASMRNIRDSLSKIAAGMTPIIDTEVPLTDFERGLARLESRQVFG
                     KVIVNF"
     gene            1586..>1823
                     /locus_tag="VIY07_13845"
     CDS             1586..>1823
                     /locus_tag="VIY07_13845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Acylates the intermediate (KDO)2-lipid IVA to form
                     (KDO)2-(lauroyl)-lipid IVA; Derived by automated
                     computational analysis using gene prediction method:
                     GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HEY6382874.1"
                     /translation="MRRIVRRLRRGFKRASNALLGTLAIGLLSGVRLTDPDRMSDFAG
                     WMMRTIGPFLPENRIGRANLVAAFPEKNRSEIDAI"
BASE COUNT          397 a          516 c          523 g          387 t
ORIGIN      
        1 gtggcgagat gacggatgcc tttcatcgta cccgttcgag cccggacggc aagccgatca
       61 ttggctgcat agccaacgcg atcaacgacg ccggtctgac gccaaacgat atagactacg
      121 tcaacgcgca cggcaccagc actcccgaaa atgacaagat ggaatacctt ggatgcgcca
      181 ccgtgtttgg tgagcgcatg aaaacattgc cgatctcttc gaataaatcg atgatcggcc
      241 ataccctttc ggcggcgggg gctgtcgaag ccgtctttac gcttttgacg ctgcagcagc
      301 agcgcattcc tcctacaatc aattacgccg ttccggatcc ggcgattcct ctcgacgtag
      361 tgcccaatga ggcgcgcgac gcaaatttgc gccatgcaat ttcgaactcg ttcggcttcg
      421 gagggcaaaa cgtgtcgctt gtgatgggtc tcgagccggc ctgattgccc accgcacata
      481 taatattggc catgcgtgcg ctgagactta tcgccgatcg caagattgaa cttgccgacg
      541 tgccaccgcc gccaccaccc ggcgcaggcg aggttcaaat tcgagttaaa gcagtcgcac
      601 ttaatcacct cgatctctgg ggttttcgcg gcatggcgtt cgccaagcgc cagctgccgt
      661 tgatagtcgg cgcagaagct tccggagaaa tcgctgcagt cgggagcggc gtttcagcct
      721 ttgtacctgg cgacaaggtt gtgatgtatg gcgctatgac ctgcggaaaa tgtcccgcgt
      781 gtcgcgatgg tcgcgacaat ttgtgcgaga acgtaggcgg gatcatgggt tttcacattg
      841 acggctttgc acgcgagctg atcaatttac ctgctcggct cgtaatttcg gtgccgaaag
      901 gcgtttcgct gcgtgatgcc gcttgtgcgc cgatcgcatt tgctacggtc gaacacatgt
      961 tgttcgacaa cgccaagctc aaacccggag agactatcct ggttcacgcc ggcgggtcgg
     1021 gcatcggctc ggctgcaatc aagatggcaa aggcgcttgg ctgtacggtc ataaccactg
     1081 tcggtgacga cacaaaagcc gacaaagcca aggcactcgg cgcggatcac gttatcaatt
     1141 acaaaaccga gcgcttcgaa ggcgttactc gcaagctcac cgggaagaaa ggtgtcgacg
     1201 tcgtcttcga gcacgtaggc ggagagggat ttaatggatc actgctctgc ctcaagcgcg
     1261 gcggacgcct ggtcacctgt ggttcgaccg cgggaccgag cgtgacgatc aatctcatgc
     1321 aactgtttca gcagcagtac aaaatacttg catcatttgg ggcatccatg cgcaacatcc
     1381 gcgacagtct atcgaagatt gctgcgggca tgacaccgat catcgatacc gaggtgccac
     1441 tcaccgattt tgagcgcggc ctcgcccgat tggaaagccg acaggtgttc ggcaaggtga
     1501 tcgtgaattt ctagcgcata gcctgaaaag tgaggaccgg ttcttcggca aagatcatgc
     1561 gccacgtaac cccgggcgtg tccagatgag acgaattgtt cgtcgcctgc ggcgcggctt
     1621 caaacgcgca agcaatgcgc tgcttggaac gcttgcaatc ggccttctca gcggagtccg
     1681 gctgaccgat cccgacagga tgtcggattt cgccggctgg atgatgcgca cgattgggcc
     1741 ctttcttccg gagaaccgga ttggccgcgc caatcttgtc gccgctttcc cggaaaaaaa
     1801 cagatccgag atcgatgcga tcc
//
LOCUS       DATDHO010000717         2794 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_332237, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000717 DATDHO010000000
VERSION     DATDHO010000717.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2794
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332237"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(289..1458)
                     /locus_tag="VIY07_13850"
     CDS             complement(289..1458)
                     /locus_tag="VIY07_13850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HEY6382875.1"
                     /translation="MGRSSSAQRRSPAKELPSAPAGAYDHVSELLGVVVDHERRKGRG
                     AHSNASGRYEPLARVAFDDGWRSLDELPPFKTTVTIDSTRKIITRNDSPDIGFDRSIN
                     PYRGCEHGCIYCFARPTHAYLGLSPGLDFETKLLVKPEAAALLEKELSSPGYEPRVIA
                     IGTNTDPYQPIERRYKVMRRILEVLDSAGHPVGIVTKSALVLRDLDILARMAERNLAK
                     VALSVTTLDATLARKMEPRAATPMRRLETLRRLSQAGVPTTVMVAPVIPALNDMEIER
                     ILEAARTAGVREAGYVLLRLPLEVRDLFHEWLMANYPDRYRHVFKLIRDMRGGKDYDS
                     TWGTRMKGTGPYAWMIGRRFEMACEKLGLNTERRSLTTEHFRKPELGSDQLNLFS"
     gene            1595..2182
                     /locus_tag="VIY07_13855"
     CDS             1595..2182
                     /locus_tag="VIY07_13855"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY6382876.1"
                     /translation="MLTAIIATHDSERLLVPTLAALVPAAATGLLTAVVVADGASRDA
                     TAEIAELAGCRFMSSRQPVGSRLKSAAANTRSPWLMFLRAGVIPQVGWIDAAESFIEK
                     TGTREGAACAAVFRSPGPSDYMRPGLAEIAGLLRAAIGGYPGAEQGLLIARRFYEVIG
                     GHPGGHDGESALFRRLGRRRLAVLGTTVSVIRQDT"
     gene            2214..>2794
                     /locus_tag="VIY07_13860"
     CDS             2214..>2794
                     /locus_tag="VIY07_13860"
                     /inference="COORDINATES: protein motif:HMM:NF024854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HEY6382877.1"
                     /translation="MAGQQTVAAVRRFNRFYTKQIGVLRKTYLDSPYSLGEMRVLYEL
                     AHRHELTASDIGRALDLDAGYLSRLLRNFQKRGLISRKTSAKDARQSHLSLTARGRKL
                     FAPMEERSQRQAGAMLDKLDASQQARIVAAMTAIEALLSDESQSQPGAKPRYILRDPR
                     AGDFGWIVSRHAELYLREYGWAEPFEGLCAQIVA"
BASE COUNT          547 a          835 c          863 g          549 t
ORIGIN      
        1 ggccttgatc gccttggcaa agattgcgtc aacttcggcc ggggtggcgc agttccaggc
       61 gaaggtggtg ccgcggaaag actgcggctc gggctgcccc ggaagcaccg catcccgcgc
      121 cagcttgtcc cagtcccgcc aggaccactc cggcgccgtc aagaaacacg atttcttccc
      181 cggtcgcgcg aaacttccgt cggaagccaa tcgcctcgta aaaacgggca ctggcctgca
      241 agtcgcgcac gccgagcgtc accgctgtca gtttcccggg tggtattgtc atgaaaaaag
      301 gttgagctgg tccgatccga gttccggctt tcggaaatgc tccgtcgtca gtgaacggcg
      361 ttcggtattc aggccgagct tttcgcacgc catctcgaaa cggcgtccga tcatccacgc
      421 ataaggaccc gttcccttca ttcgggttcc ccaggtcgaa tcgtaatcct tgccaccgcg
      481 catgtcgcgg atcagcttga aaacatgccg gtagcgatcg ggatagttcg ccatcagcca
      541 ttcgtggaac aagtcgcgca cctcgagcgg caggcgcaga agaacgtagc ctgcttccct
      601 cacgccggcc gtacgggcgg cttcaaggat acgctcgatc tccatgtcgt tcagcgccgg
      661 tatcacagga gcaaccatga cggttgtagg cacgccggcc tggcttaagc gccgcaacgt
      721 ctccaaacgg cgcattggcg tggcggcacg cggctccatc ttgcgggcga gcgtcgcatc
      781 aagcgtggtc actgatagag cgacctttgc aagatttcgc tcagccattc tggccaatat
      841 gtcgagatcc cgcagcacga gagcagattt ggtcacgatc ccgacggggt gaccggcact
      901 gtcgagcacc tccaggatgc gacgcatcac cttgtaacgt cgttctattg gttgatacgg
      961 atcggtgttc gtgccgattg caatgaccct tggctcatag ccaggcgagg acagctcttt
     1021 ttcgagcaga gcggctgctt caggcttcac cagcagcttg gtttcaaaat cgagtccagg
     1081 cgacagccca agataggcgt gggtcggccg cgcgaaacag tagatgcagc catgctcgca
     1141 gccccggtaa ggatttatcg aacggtcgaa gccgatatcc ggggaatcgt tgcgagtaat
     1201 tatcttgcgg gtggaatcga tcgtgaccgt tgtcttgaac ggtggaagtt catcgagact
     1261 tcgccagccg tcgtcaaaag cgacccgagc aagcggctcg tagcggccag aggcattgct
     1321 atgtgcgccc cgcccctttc gccgctcgtg gtcgacgacg acaccgagaa gttcgctgac
     1381 atggtcataa gcgcccgccg gcgcggaggg cagctccttc gccggcgagc gtctctgggc
     1441 tgagcttgat cgacccatga ctgagaccct aactgccaaa tgtgaacata acaagaacag
     1501 atttaaacga caggccttac gggcttgatc tcgtggccga aaaaaccgga gccacatgat
     1561 attgtgccca acggactaaa gcggccgcgg ttccatgctc actgcaatca ttgccaccca
     1621 cgactcggaa cgtttgttgg tcccgacatt ggcagcgctc gtccccgcgg cggcgacggg
     1681 cttactgacg gcggtggtcg ttgccgatgg ggcgtctcgc gacgcgactg cagagatcgc
     1741 agaactcgcc gggtgccggt ttatgtcatc taggcaaccg gtgggatcgc ggctgaaaag
     1801 cgcggcagca aatacacgca gtccctggct tatgtttctc cgcgcaggcg tgatccctca
     1861 ggtcggctgg atcgacgctg ccgaaagttt cattgaaaaa acagggacac gggagggtgc
     1921 ggcatgcgca gcggtattca ggtcgccggg tccttccgat tacatgcggc ctggccttgc
     1981 cgaaatcgcc ggcttgttgc gcgctgcgat cggcgggtac ccgggagccg aacaaggcct
     2041 gctgatcgcc cggagatttt acgaggtcat cggcggccat ccgggcgggc acgatggcga
     2101 aagcgcgctg ttcaggcgtc tggggcgccg caggctggcc gtacttggga caacggtcag
     2161 cgtgatccgt caagatactt gactttgtca atcaatttac cgacgcttgc cctatggcag
     2221 gccagcagac agttgccgcg gtccgccggt tcaaccgctt ctacacgaag cagatcggcg
     2281 tgctgcgcaa gacttacctc gacagtccct attcgctcgg ggagatgcgc gttctttacg
     2341 agctggccca tcgccacgaa ctgacagcga gcgatattgg ccgcgcgctc gacctcgatg
     2401 cgggatatct cagccgcttg ctgcggaatt tccagaagcg cgggctgatc agccgtaaga
     2461 cgtcggcgaa agatgcgcgc cagagtcatt tgtcgctgac cgcgcggggt cgcaaattgt
     2521 ttgcaccgat ggaagagcgc tcgcagcggc aggcgggcgc catgctcgac aagctcgacg
     2581 catcgcagca ggcgcggatt gttgcggcga tgacggcgat cgaggcattg ctttccgatg
     2641 agtcacaatc gcaacccggc gcaaagccgc gttacatttt gcgcgacccg cgtgcgggcg
     2701 acttcggctg gatcgtgtca cgccacgccg agctttatct gcgagagtac ggttgggccg
     2761 agccgttcga gggcttgtgc gcgcagattg tcgc
//
LOCUS       DATDHO010000718         6697 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_33850, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000718 DATDHO010000000
VERSION     DATDHO010000718.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6697)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6697)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6697
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33850"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(747..1160)
                     /locus_tag="VIY07_13865"
     CDS             complement(747..1160)
                     /locus_tag="VIY07_13865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0010257 - NADH dehydrogenase complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone oxidoreductase subunit NDUFA12"
                     /protein_id="HEY6382878.1"
                     /translation="MKDFLLKFFTWWNSQTFGTQFWTWMYGEFVGEDEFGNRYYRTRG
                     GKIDPTLGFERRWVIYNGYTEASCVPPSWHGWLHHTVDTPPTQESYKPYPWQKPHRPN
                     LTGTPAALRPPGSTLAAGRRPKATGDYRAWTPGKQ"
     gene            1285..2424
                     /locus_tag="VIY07_13870"
     CDS             1285..2424
                     /locus_tag="VIY07_13870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEY6382879.1"
                     /translation="MDAIRSAVVAIKNGLDWLPDPVVAVIILGLAVVAALAAHNWLHD
                     LLRRLIAHRYPTTFSLFDKTATLTKLALITLAMIIVIPVAPLYRETAEILARLLSMAV
                     IGLIGWTAIVALQLSAAAYLRRFRLDADDNFLARKHNTQVRILLRVVDGIIVLVTIGA
                     ALMTIPSVRQYGISLFASAGIAGIAAGLAARPVLSNLLAGVQLAMTQPIRLYDSVIVE
                     GEYGTIEEIGATYVTVKLWDLRRMVVPLSYFIEKPFQNWSRENSSSLIGSVMLYVDYR
                     APVPVIREKLMEILRQSDRWDGTTAALQVTDFKQGSIELRCLMSARAPGQTFDLRCEV
                     REKLIDFLQRVHPEALPHSRQISLKGDAEEIAPSQEAAPKRAKRG"
     gene            3293..>6697
                     /locus_tag="VIY07_13875"
     CDS             3293..>6697
                     /locus_tag="VIY07_13875"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HEY6382880.1"
                     /translation="MRTERRYTKDRQSAYAGIEFRLTASEIRNPDGSVVFKLDNVEVP
                     EFWSQVASDVLAQKYFRKAGVPARLKKVEENSVPSFLWRSVADEDALATLPEKERYIG
                     EISSKQVFDRLAGTWTYWGWKGGHFDSEEDAQAFFDELRYMLATQMCAPNSPQWFNTG
                     LHWAYGIDGPSQGHHYIDPFTGKLTKSKSAYEHPQPHACFIQSISDDLVNEGGIMDLW
                     VREARLFKYGSGTGTNFSALRGEGERLSGGGKSSGLMSFLKIGDRAAGAIKSGGTTRR
                     AAKMVIVDIDHPDIETYIDWKVLEEQKVAALVTGSKINQKHLKAILKACVNCEGSGDD
                     CFSPEKNPALKREIKLARRSHVPDNYIKRVIQFARQGYKDIYFPTYDTDWDSEAYLTV
                     SGQNSNNSVRVTDHFLKAVEADGKWDLTYRKNGKVAKTLDARALWEKIGYAAWASADP
                     GLQYHTTVNDWHTCPASGEIRASNPCSEYMFLDDTACNLASLNLLTFRDEKTGKFQVE
                     SYEHAVRLWTVVLEISVMMAQFPSRQIAERSFEFRTLGLGYANIGGLLMTSGIPYDSD
                     AGRAIGGALTAIMTGVSYATSAEMAEKLGPFPGYKKNREHMLRVMRNHRRAAYGERSG
                     YEKVATPPVPLDHAACPEQALIAHAKSAWDRALALGEKHGYRNAQATVIAPTGTIGLV
                     MDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPEALRTLGYSEADIAEIEAYAVGHG
                     TLAQAPAINHTTLTAKGFTEEAIAKVEKALPTAFDIKFVFNKWTLGEDFCRDKLGISA
                     EDLASPTFDLLTALGFGKREIEAANIHVCGAMTVEGAPHLKAEHYPVFDCANPCGRTG
                     KRYLSVESHIRMMAAAQPFISGAISKTINMPNDATVEDCKAAYLLSWKLALKANALYR
                     DGSKLSQPLNAQLIADEEDEDDAIETFLERPAAARATGLAEKVVEKIVERVTVLRERE
                     RMPDRRKGYTQKAVVGGHKVYLRTGEYDDGRLGEIFIDMHKEGAALRSIINNFAIAVS
                     LGLQYGVPLEEYVDAFTFTRFEPQGPVQGNDSIKYATSILDYVFRELAVSYLERFDLA
                     HVDPSEAGGFDALGKGVEEGKPTPATNYVSKGLTRSRTDRLSVVRGT"
BASE COUNT         1292 a         2064 c         2059 g         1282 t
ORIGIN      
        1 tacggcagtc ggattggtga tgcgttgcgg cggcggctcg accaccaccg cgtcactggg
       61 ctgcggcgcc gtattcgtcg gctgcggggc gttgcgcggt gagcctggac ctggcggcaa
      121 ggcagatggc gcctgacctg gtccgacggc ggtcccttgt ggcgcctgac ctggcggagc
      181 ttgcggcgcg acgactccgc ctgtcggggg tggcagaggc tgcgtttgaa cgttgccttg
      241 ccccgggcgg ttcgacggcg gcaggttcat tggcgccggc agtggctgcg atggcggggt
      301 atcgcggccg ctcgggtaat acggaggcgg ctgttgccgg gatgacggcg gaccgcgcac
      361 atcgcttggc gggcgtggcg gcgggttgcc gaagatcgat ccgaagaagt cggcgatcgg
      421 attctcgcca gattgggcca gagcaggctc catagcggac ggtgccgcca gtagcatggc
      481 gccaaccaat agtgcgcgag atgagaggca atgcgccatc aagttccggc tttttgcctg
      541 gccggcgaca attcgcctga cgcccgattg ctctgcccgg ttaacacggg gattgcggcc
      601 ttggaagggc ggccagttat gcctttgaat ctgcccgttc gtcccggcga aagctgggac
      661 cagcccgcgt gaatcccacg tttgctccgg attcccgcct gcgcgagaat gaacggggct
      721 aaatccgtcc catgatcagc tgaagatcac tgctttcccg gagtccaggc cctgtaatcg
      781 cccgttgcct tcggacggcg accggcggcc aaagtcgagc ctggcggacg caaggcggcc
      841 ggcgtgccgg tcaaattcgg ccggtgcggc ttttgccatg ggtatggctt gtagctttcc
      901 tgcgtcggtg gcgtgtccac agtgtgatgc agccagccgt gccaggatgg cggcacgcat
      961 gaggcttccg tgtagccgtt gtatatcacc cagcgccgtt cgaacccgag cgtcgggtcg
     1021 atcttgccgc cgcgggtgcg ataatagcga ttgccaaatt cgtcttcgcc gacgaattcg
     1081 ccatacatcc aggtccagaa ctgggtcccg aatgtctgcg aattccacca ggtgaagaat
     1141 ttgagcagga aatctttcat tgccgacaac aaaccaggtt ggaacgtggg ccttttgcca
     1201 cctcggcgcg gccaagtcca gcgcaccaaa tgcgcccgca agccccctat tcgccctctt
     1261 ttccggcaat gctagtaagg ccgcatggac gcgatcagat cggccgtagt cgcaatcaag
     1321 aatgggctcg actggctccc cgacccggtc gtggccgtga ttattttggg acttgccgtt
     1381 gtcgcggcac tggcagcaca caactggctg catgacttgc tgcgccgatt gattgcgcat
     1441 cgttatccga ccacgttctc gcttttcgac aagacagcca cgctcaccaa acttgcgctg
     1501 ataacgctgg caatgatcat cgttatcccc gtcgcgccac tctatcggga aacagcggaa
     1561 atactggcga ggctgttgtc gatggccgtc atcggcctga tcggctggac cgcaattgtt
     1621 gctctccagc tttcggcggc tgcctatctt cgacgctttc gtctcgacgc cgatgacaac
     1681 tttctcgcgc gcaagcacaa cacgcaggtg cggatattgc tgcgcgtcgt cgacggcatc
     1741 atcgtgctgg tgacgatcgg tgccgccttg atgacgatcc cctcggttcg tcaatacggc
     1801 atcagcctgt ttgcttccgc aggaattgcc ggcatcgccg ccggtctggc ggcgcgaccg
     1861 gtattgagca atctgctggc gggggtgcag cttgcgatga cgcaaccgat tcgtctgtac
     1921 gattccgtga tcgttgaggg cgaatacggc acgattgaag aaatcggcgc cacttatgta
     1981 accgtcaaac tttgggatct gcggcgcatg gtcgtgccgc tgagctattt cattgaaaag
     2041 ccgtttcaga actggtcgcg cgagaactca tcctcgctga tcggcagcgt gatgctctac
     2101 gtcgattaca gggcgccggt ccccgttatt cgcgaaaagc tcatggaaat tctccggcaa
     2161 tccgacagat gggacgggac gactgccgcc cttcaggtga ccgatttcaa gcagggcagc
     2221 atcgagctgc gctgcctgat gagcgctcgt gcgccgggac agacgttcga cctgcgttgt
     2281 gaggttcgcg aaaagctcat cgatttcctg caaagggtgc accccgaagc actgccgcat
     2341 tctcggcaga tcagcttgaa gggagacgcc gaggagattg ccccatcgca ggaggcggcc
     2401 cccaagcgcg ccaagcgggg ttagctaccg cggcgtgacc gagaccggcg gcggacagtt
     2461 gcgtttatgt gcgcctcgcg gctatcctgc tcatgaattc atcagggttg gtttgagtcg
     2521 cccactattt ggcggcgcca ctgctgaaaa ttcgaacgac agtgccggga taaaaggcgg
     2581 gctccttggg gtccgccttt tttcatgccg gccgtggatt gaaccgaatt cacaggagtg
     2641 ggtgacgtcc gcttctgttt cccaccttgg tgcctgtccc gtaacgtttt gaaatctatt
     2701 cgagaatcag cgactccggg ggcgttggcg aacgaatttt ccccgctttg tcccctttct
     2761 tcccgcgcag ggcttttccg cttcccggca cggaagtccc atttttcgtc atttttctgt
     2821 catggccgga ggcataaaaa cctacattcc ccccgacaga aaaatacttt tcgccggtcc
     2881 gcgatgggcc aatactggac cggttctttc ggtccgttgt ccctcaaagt cagccgatag
     2941 acacaagatt tagtgtttga ttcagatttg atgactatct cttgttgacg cgtacgatga
     3001 gtccacctaa ctttggtgtg ttcggtggcg ttgagtatca ggttccctcc ggaccctcag
     3061 aacggctttt cagtcgatga gctcaaccca cgccagaacc atggcgtttg ggaatgggac
     3121 tgtctgtgcc cccggggtcc aaaacccccg ggaacgaacc ggtgccggat tagagcatcg
     3181 gacgtagatg ggacgggttg aacgagtacg agcaacgacg gcggatcggg acaggtccgt
     3241 cagaaccaaa aggacggtgg tcaaccgtcc tgcaatttgg ggctagagac acatgcgcac
     3301 tgagcgtcgc tacaccaagg atagacagtc ggcctacgcg ggcatcgagt tccgcctcac
     3361 cgccagtgag atccgcaacc cggacggctc ggtggtgttc aagctcgaca atgtcgaggt
     3421 gccggaattc tggtcgcagg ttgcctccga cgtcctggcg cagaagtatt tccgcaaggc
     3481 cggcgtcccc gcccgcctga agaaagtcga ggagaattcc gtaccgtcct tcctctggcg
     3541 ttcggtcgcc gacgaggacg cgctcgccac gctgcccgag aaggagcgtt acatcggcga
     3601 gatcagttcc aagcaggtgt tcgaccgtct tgccggcacg tggacgtatt ggggctggaa
     3661 gggcggccac ttcgattccg aggaagacgc acaggctttc ttcgatgagt tgcgctacat
     3721 gctggcgacg caaatgtgcg cgcccaactc gccgcagtgg ttcaacaccg gcctgcactg
     3781 ggcctacggc atcgacgggc cgagccaggg ccaccactac atcgatccct tcaccggcaa
     3841 gctgacgaaa tcgaaatcgg cctacgagca tccgcagccg catgcctgct tcatccagtc
     3901 gatcagcgac gaccttgtca acgaaggcgg gatcatggac ctgtgggtgc gcgaagcgcg
     3961 cctgttcaag tacggctccg ggaccggcac caatttctcg gcgctgcgcg gcgaaggcga
     4021 gcgcctctcc ggcggcggca agtcgtccgg cctgatgtcg tttttgaaga tcggcgaccg
     4081 cgcggcgggc gctatcaagt cgggcggcac cacgcgccgc gccgcaaaga tggtgatcgt
     4141 cgacatcgat cacccggaca tcgagactta catcgactgg aaggtactgg aggagcagaa
     4201 ggtggcggcc ctcgtcaccg gctccaagat caaccagaaa cacctcaagg cgatcctaaa
     4261 ggcctgcgtg aactgcgagg gctcgggcga tgattgcttc tcacccgaga aaaacccggc
     4321 gctgaagcgc gagatcaagc tcgcgcgcag gagccatgtg cccgacaatt acatcaagcg
     4381 cgtgatccag ttcgccaggc agggctacaa ggacatctat ttcccaacct atgacaccga
     4441 ttgggattcc gaggcctatc tgaccgtttc ggggcagaac tcgaataact cggtgcgcgt
     4501 cacggatcat ttcctgaagg cggtcgaggc cgacggcaag tgggacctca cctatcgcaa
     4561 gaacggcaag gtcgcaaaga cgctcgatgc gcgcgcctta tgggagaaga tcggttacgc
     4621 cgcctgggcc tcggccgatc cgggcctgca atatcacacc acggtcaatg actggcacac
     4681 ctgcccggct tcgggcgaaa tccgcgccag caatccgtgc tcggaataca tgttcctcga
     4741 cgacactgcg tgcaatctgg cgtcgttgaa cctgctcacc ttccgcgacg agaagaccgg
     4801 caaattccag gtcgagagct acgagcacgc ggtgcggctg tggaccgtcg ttctcgaaat
     4861 ctcggtgatg atggcgcagt tcccctcgcg ccagatcgcg gaacgttcgt tcgaattccg
     4921 caccctcggg ctcggctatg cgaacatcgg cgggctgctg atgacctcgg gcattccgta
     4981 tgactccgat gccggccgcg ccatcggcgg cgcgctgacc gcgatcatga ctggcgtttc
     5041 ctatgcaacc tcggccgaaa tggccgagaa gctcgggcca ttccccggct acaagaagaa
     5101 ccgcgagcat atgctgcgcg tgatgcgcaa tcatcgccgc gccgcctatg gcgaacgcag
     5161 cggctacgag aaggtcgcaa ccccgccggt gccgctcgac cacgccgcct gccccgagca
     5221 ggcgctgatc gcgcatgcca agtctgcctg ggaccgcgca ttggcgctcg gtgaaaagca
     5281 cggctatcgc aatgcccagg cgaccgtgat tgcaccgacc ggcaccatcg gcctagtcat
     5341 ggattgtgac acgacaggca tcgagccgga cttcgcgctg gtcaagttca agaagctcgc
     5401 cggcggcggc tacttcaaga tcatcaaccg cgcggtgccg gaagcgctgc gaacgctggg
     5461 ctatagcgaa gctgacatcg cggagatcga ggcctatgcc gtaggccatg gcacgctggc
     5521 gcaggcgccc gcgatcaacc acaccacact cacggccaag ggcttcaccg aggaagcgat
     5581 tgccaaggtg gagaaggccc tgccgaccgc gttcgacatc aagttcgtct tcaacaagtg
     5641 gacgctcggc gaggacttct gccgcgacaa gctcggcata tcggccgaag accttgcctc
     5701 cccgaccttc gatctcctca ccgcgctcgg cttcggcaag cgcgagatcg aggccgcaaa
     5761 catccatgtc tgcggcgcca tgacggtcga aggcgcgcca cacctgaagg cggagcacta
     5821 tccggtattc gattgcgcca acccgtgcgg ccgcacgggc aagcgctatc tctcggtcga
     5881 gagccacatc cgcatgatgg cggcggcaca accgttcatt tccggcgcca tctccaagac
     5941 catcaacatg ccgaacgatg cgacggttga ggactgcaag gcagcctatt tgctgtcctg
     6001 gaagctcgca ttgaaagcca atgcgctgta ccgcgacggc tccaagctga gccagccgct
     6061 gaacgcgcaa ctgatcgcag acgaggaaga cgaggacgac gccatcgaaa ctttcctcga
     6121 gcgtccggcc gccgcgcgcg caaccggcct cgcagaaaag gtggtggaga agatcgtcga
     6181 gcgcgtcacc gtgcttcgcg agcgcgagcg catgcccgac cgccgcaagg gatacaccca
     6241 gaaggctgtg gtcggcggcc acaaggtcta tctccgcacc ggcgaatacg acgacggccg
     6301 cctgggcgag atcttcatcg acatgcacaa ggaaggcgcg gcgcttcgct ccatcatcaa
     6361 caatttcgcc atcgcggtgt cgctcggcct gcaatacggc gtgccgctgg aggaatatgt
     6421 cgacgccttc accttcaccc gcttcgagcc gcaggggccg gtgcagggca acgactcgat
     6481 caagtacgcg acctcgatcc tcgactatgt tttccgcgag ctcgcggtct cctacttgga
     6541 gcgtttcgat ctcgcgcacg tggatccgag cgaggccggc ggcttcgacg cgctcggcaa
     6601 gggcgttgag gaaggcaagc ctacgcccgc gaccaactac gtctccaagg gcctgacgcg
     6661 gtcgcgtacg gatcgcctgt ccgtggtgcg cggcacg
//
LOCUS       DATDHO010000719         4060 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_332423, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000719 DATDHO010000000
VERSION     DATDHO010000719.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4060)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4060)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4060
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332423"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            7..768
                     /locus_tag="VIY07_13880"
     CDS             7..768
                     /locus_tag="VIY07_13880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382881.1"
                     /translation="MIEVRDLVVDLKGNRVLNGVNLDVYRGEILGFVGASGAGKSVLT
                     RTILGLLPKQRGRIDVFGVNLDEAGEMQRQEIERRWGILFQQGALFSSLTVGENVEFP
                     IKEYLDVSDRLMTEIAITKLEMVGLKPDVYRKYPSELSGGMIKRVALARALALDPEIL
                     FLDEPTSGLDPISAGDFDQLIMTLQRVSSMAVFMVTHDLDSLHTICDRIAVLGEGKII
                     EAGTMDTMLASQHPWLKAYFHGVRARSGLKAAASN"
     gene            778..1632
                     /locus_tag="VIY07_13885"
     CDS             778..1632
                     /locus_tag="VIY07_13885"
                     /inference="COORDINATES: protein motif:HMM:NF014523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HEY6382882.1"
                     /translation="MMERKAHYALIGLFTFAVVAGAFGFIFWLHHSSGKKQAVAYRVI
                     FDSSVSGLQVGGNVLFNGIRVGEVTSLRLDPDRPNQVIAMLAVNKSTPIRSDTRVGLE
                     FAGLTGVAAVSLKGVSAKTPLIEREEGEPPSLKADPSASQDMMQAAREVLNKAEEVIA
                     ANQEALHQAITDIATFSASLARNSDNVDTIVRDAKETISNAKEATASARALMDNLDKR
                     TDDITIGVNKMTATATRQIDLAGRAITDLAHNPQRFLFGGGPSSSEAAATPAPAPARR
                     RPPPQQQQ"
     gene            complement(1647..2762)
                     /locus_tag="VIY07_13890"
     CDS             complement(1647..2762)
                     /locus_tag="VIY07_13890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6382883.1"
                     /translation="MKSSAKGIGLAIIGGGRVGLFRGEVAARHPAVQWIGLAEKNPNR
                     AGEVGPKIGADFVTQSHVELLKRPEVTAAIICTDEHLHVDPIMAAIERGIPMLIEKPL
                     ATNLAESERVLKAIQAAKLDAVVGYTQRFRRRWLAAKEKCRTGALGDVTMVTSRAFMN
                     RLVAIDNYKRTDDPATISPMVISGTHALDICMWCLEGKTAVECYARSVDKVLGPAYRG
                     IDGTAGMINFSDGTIYHLNMSWALPVTWPAAVYSLEVGIVGTTGVLTIDDTHRDIVLA
                     VSKPQSEGYNPDASRLVDFMGSYPPGDMALGELRGPMAEETDSWLNRVALGLPTAAAT
                     VEEAHRNLMLTKALDLSARRKQPVKLPLDPDEVRAAA"
     gene            complement(2759..3850)
                     /locus_tag="VIY07_13895"
     CDS             complement(2759..3850)
                     /locus_tag="VIY07_13895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6382884.1"
                     /translation="MKTVEAAVIGVGWVGGTRADTLRRTALVDKLHLCDIKPDRLAEV
                     KALYKPATATLDYKDIIDNPNISVVYISTTPESNHYPICRDCLKAGKNVMLEKPIALE
                     LWEADELIQLAKRNNLKFTIGYSQRFNPKIAYAKKKIVDGTLGKVVSVLVSRHLSRSL
                     GKKIASRVRLSPVVMESTHDLDFVLWLLEPAKPIRVYSQGAYGYMEPINGSHDVMFTT
                     VTMDNGVAVMIGGGWNLPPSYPNYCATWIEITGTEGALFLDDTQRDNWLNTQKDGQQF
                     PMSTMPGEWVDNVFAGGMGPETIHFLEACIRDTPVMVTPESARRVMETYSAADLSADR
                     NEPVDLPLSNETISAIAEFKQKIRAGVNQ"
BASE COUNT          779 a         1237 c         1236 g          808 t
ORIGIN      
        1 gaatccgtga tcgaggtgcg cgacctcgtt gtcgatctca agggcaaccg cgtcctcaac
       61 ggcgtcaacc tcgatgtcta tcgcggcgag atcctgggct tcgtcggagc ttcgggcgca
      121 gggaaatcgg tgcttacgcg cacgatcctc ggcctgttgc cgaagcagcg gggacggatc
      181 gatgtcttcg gggtcaatct cgatgaagcg ggcgagatgc agcgccagga gatcgaacgc
      241 cgctggggca tactgttcca gcaaggtgca ttgttttcgt cgctgactgt cggcgaaaac
      301 gtcgagtttc cgatcaagga atatctcgac gtttccgacc gcctgatgac cgaaatagcc
      361 atcacaaagc tggaaatggt cgggctgaag ccggacgtgt accggaaata tccttcggag
      421 ctttcaggcg gcatgatcaa gcgggtggcg ctggcgcgcg ccctggcact cgacccggaa
      481 attctctttc tggatgagcc gacttcgggc ctcgatccga tcagtgccgg cgatttcgat
      541 cagttgatca tgaccttaca acgggtttcg tcgatggccg tttttatggt aacccatgac
      601 ctcgacagct tgcatacgat ttgcgacagg atcgcggttc tcggtgaagg caagatcatc
      661 gaagccggta ccatggatac gatgctggca tcgcagcatc cctggctgaa ggcctatttc
      721 cacggcgtgc gcgccagatc aggcctgaag gctgcggcca gcaactaagg gagtgggatg
      781 atggagagaa aagcgcacta cgccctgatc ggactgttca cgttcgccgt ggtcgcgggc
      841 gcgttcggct tcatcttctg gctgcaccat tcgtcgggca agaagcaggc tgttgcatac
      901 cgcgtgatct tcgacagctc ggtttcgggc ctgcaggtcg gcggtaacgt gctgttcaac
      961 ggcatccgcg tgggcgaggt caccagcctg aggctcgacc ccgacaggcc caaccaggtg
     1021 atcgcgatgc tggccgtcaa caagtcgact cccattcgct ccgacacacg ggtgggcctc
     1081 gaatttgcgg ggctgaccgg ggtcgccgcc gtgtcgctca aaggcgtctc tgcgaaaacg
     1141 ccactgatcg agagagaaga aggcgagccg ccctctttga aggccgatcc aagcgccagc
     1201 caggacatga tgcaggcggc gcgcgaagtg ctgaacaagg cggaagaagt gatcgccgcc
     1261 aatcaggaag cgttgcatca ggccattacg gatattgcca cgttcagcgc ttcgctcgcg
     1321 cgcaacagcg acaatgtcga cacgatcgtg agagacgcca aggaaacaat aagcaacgcc
     1381 aaggaggcaa ccgcgtcagc ccgcgcgctg atggataatc tggacaagcg aacggacgac
     1441 atcacgatcg gggtcaacaa gatgacggcc accgcgacgc ggcaaatcga tcttgccggc
     1501 cgggcaatca ccgatctcgc ccacaatcca cagcgcttcc tgttcggcgg tggtcccagc
     1561 agcagcgaag ctgcggcaac gcctgcccct gctccggccc gcagacggcc tccgccgcag
     1621 cagcagcaat agcaatagcg ccgtcgtcag gcagcagcgc gcacttcgtc aggatcaagc
     1681 gggagcttca ccggctgctt gcgcctggct gacaggtcga gggcctttgt cagcatcagg
     1741 ttccgatgcg cttcctccac cgttgcggcg gcggtcggca atcccagcgc cacgcggttg
     1801 agccatgagt cggtttcctc cgccatcggt ccgcgcaatt caccgagcgc catatcgccg
     1861 ggcggatagc tgcccatgaa gtcgaccagc cggctggcgt ccgggttgta gccctcggac
     1921 tgcggcttcg aaacagccag gacgatgtcg cgatgcgtat cgtcgatcgt cagcacgccg
     1981 gtggtgccga cgattccgac ttcgagcgag tacacggccg cgggccaggt caccggcaag
     2041 gcccatgaca tgttaagatg atagatggtg ccgtcggaga aattgatcat ccccgcggtg
     2101 ccgtcgatgc ccctataggc ggggcccagc accttgtcga ccgagcgcgc gtagcattcc
     2161 accgcagtct tgccttcgag gcaccacatg cagatgtcga gcgcatgcgt gcctgaaatg
     2221 accatcggcg agatggtcgc cggatcgtcg gtgcgcttgt aattgtcgat tgcgaccagc
     2281 cggttcatga aggcgcgcga ggtcaccatc gtgacatcgc ccagcgcgcc ggtgcggcat
     2341 ttctcctttg ccgcaagcca gcgccggcga aaacgttgtg tgtatccgac gacggcatca
     2401 agtttcgccg cctggattgc cttcagcacg cgttcggatt cggcgaggtt ggtcgccagc
     2461 ggcttctcga tcagcatcgg aataccgcgc tcgatggcgg ccatgatcgg atcgacgtgg
     2521 aggtgctcgt ccgtgcatat gatcgcagcg gtgacctccg gccgcttgag caattcaacg
     2581 tggctctgcg tgacaaagtc cgcaccgatt ttcggaccca cttcgcccgc ccgattcggg
     2641 ttcttttccg ccagcccgat ccactggacg gcaggatggc gagcggccac ctcgccgcgg
     2701 aacaaaccga cgcggccgcc gccgatgatt gcgagaccga tgcccttggc cgagcttttc
     2761 attggttcac ccccgcgcgg atcttctgct tgaactcggc gatagccgaa attgtttcgt
     2821 tggacagcgg caaatccacc ggctcgttcc ggtcggcgga aagatcggcg gcgctgtagg
     2881 tttccatcac gcggcgcgcg ctttccggcg tcaccatcac aggcgtgtcg cggatgcagg
     2941 cctccagaaa gtgaatggtc tcgggaccca tgccgccggc gaaaacgttg tcgacccatt
     3001 cgcccggcat cgtggacatc ggaaactgct ggccgtcttt ttgcgtattg agccagttgt
     3061 cacgctgggt gtcgtcgaga aacagcgcgc cttcggtgcc ggtgatctcg atccacgtcg
     3121 cgcagtaatt cggatagctc gggggcaggt tccagccgcc gccgatcatc accgcaaccc
     3181 cgttgtccat cgtaacggtc gtgaacatca cgtcgtgaga gccgttgatg ggctccatat
     3241 agccgtaggc gccctgcgaa tagacgcgta tgggctttgc cggctcgagc agccagagca
     3301 cgaaatcgag atcgtgcgtc gattccatca caacaggtga aagccgaacg cggctggcga
     3361 tcttctttcc gaggctgcgc gagagatgcc gactcacgag cactgacacg accttgccga
     3421 gcgtgccgtc gacgatcttc ttctttgcgt aggcaatttt cgggttgaag cgctgcgaat
     3481 atccgatggt gaatttcagg ttgttgcgct tcgccagctg gatcagttcg tcagcttccc
     3541 acaattccaa tgcgatcggc ttctccagca tcacgttctt gccggccttc agacaatcgc
     3601 gacagatcgg gtagtgattg gattccgggg tcgtggaaat atagacgacc gagatgttcg
     3661 gattgtcgat gatgtccttg taatcgagcg tcgcggtcgc cggcttgtaa agtgccttaa
     3721 cctcggccag ccgatccggc ttgatgtcgc acaggtgcaa cttgtccacc agggccgtgc
     3781 gcctcagcgt atccgcgcgc gttccgccga cccatcccac gcctattacc gcggcttcaa
     3841 ccgttttcac cagacttctt ccttccgctt cttgtgatgc ttgcggccgg ccggccgagc
     3901 gcgccgcaga ctagctcacg catgttttca ccgaaagccc gtgatttttc agcttgcgaa
     3961 agcagcgtgc cgcacgccga agacctgcgc tgcgaattgc ggataaacct cggccaattg
     4021 cggtgcaacg acttcgcgca tgagcctgag tgtctcggag
//
LOCUS       DATDHO010000720         3944 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_33964, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000720 DATDHO010000000
VERSION     DATDHO010000720.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3944
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_33964"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..524
                     /locus_tag="VIY07_13900"
     CDS             <1..524
                     /locus_tag="VIY07_13900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012093333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY6382885.1"
                     /translation="KEDWSRMGKFEDLMPHVQRFNIPFVDGKALIEATPEFWEYPMCD
                     RDPLPRWSHGRVTLLGDAAHPMYPVGSNGASQAILDARCLADKLVSAEHPAHALWAYE
                     QERLPMTAQIVQMNRKGGPEGVIDVVEELAPDGFSNIDDILPYEQRKAIVRGYASTAG
                     FSREQVNRPAKTA"
     gene            complement(562..1011)
                     /locus_tag="VIY07_13905"
     CDS             complement(562..1011)
                     /locus_tag="VIY07_13905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6382886.1"
                     /translation="MQTLTAGITKAGTGIEGIVWNILGQTYVPKSLSESSFSWHATFP
                     PGTFVPPHIHPTQDEFIYLFEGRLDLILDGKDVVAQPGDLIRMPMNVPHGIFNKSDQT
                     VKCFFWVSPTRRLYDLFSAIHSMKEQKPEEVVALSARHEVNFLPPPA"
     gene            1215..2384
                     /locus_tag="VIY07_13910"
     CDS             1215..2384
                     /locus_tag="VIY07_13910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382887.1"
                     /translation="MKTSKLFVTVAAVALFGFSGQAQEKLKIGVIATLSGPPAVLGQQ
                     LRNGVQLAVKDLGGKLGGREVEVIVQDDELKPDVAVSKAKALIERDKVDFLVGPIFSN
                     ILQAIFKPVTDAGVILISPNAGTSNFAGKECNANFFVTSYQNDQAFGVAGKYAQDAGL
                     KKIFLIAPNYQAGRDALAGFKSFYKGEIADEVYVPLGQLDYSAELAKIAAASPGAIYV
                     FLPGGMGINFVKQFRQAGLADKTVFLSAFTVDESTLPAQQDAAVGFFGGANWAPNLDN
                     PQNKKFVAGYEKEFGAVPATYAFQSYDAVLLIDGALKLTKGNIADKDALRAALKKADF
                     TSLRGSFKFNTNNYPIQDFYLVKVAKRGDGKFQTEIDKKVFTNFADPHAKDCPMK"
     gene            2407..3330
                     /locus_tag="VIY07_13915"
     CDS             2407..3330
                     /locus_tag="VIY07_13915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382888.1"
                     /translation="MSTGLFVVQVLNGLQFGVLLFLIAAGLTLVFGVMDFINLAHGVQ
                     YMLGAYLAVAFYALTGNFLIALLLALAAALLFGLLLEFVVFRHLYDRDHLEQVIATFG
                     IIIFLNQAVKTVWGAAPLTLPIPEMFSGSIVLMPGLLYPVWRLVIIASGLVVAVLLYV
                     LVNRTRVGMLIRAGATNARMVSALGVDIRRLFMILFGFGTMLAAFAGAMIAPILSVEP
                     GMGDSVLILAFVVIVIGGIGSIRGAFLAALLIGLVDTLGRSFAIDILRLVMPPSPART
                     VGPAIASMLIYVLMALVLYFRPAGLFPARGR"
     gene            3330..>3944
                     /locus_tag="VIY07_13920"
     CDS             3330..>3944
                     /locus_tag="VIY07_13920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6382889.1"
                     /translation="MARTIAASSTVPVRQPDRPGLLPAMIFLVLALIPAAAMLGPESY
                     LLGLFTRVMVFAIAAMALDFICGYGGLVSFGHAAFVGIGAYTVGILGAHGITDMLVSL
                     PVALLAGAIFAYLTGTVCLRTKSVYFIMITLAFGQMAYFIAGSLAPYGGDDGLTIRLR
                     STLLGFPFLQNDRTLYYFVLLCLLLPYLMFRAIVYSRFGRVFRGT"
BASE COUNT          731 a         1157 c         1160 g          896 t
ORIGIN      
        1 ggaaggaaga ttggtcgcgc atgggcaaat tcgaagatct gatgccccat gtgcaacgct
       61 tcaatatccc gtttgtggac ggaaaggcgt tgatcgaagc gacgccggag ttctgggaat
      121 acccaatgtg cgatcgcgat ccgcttccgc gctggtcgca tggccgtgtc accctgctcg
      181 gcgatgctgc acatccgatg tacccggttg gctcgaatgg cgcctcgcag gcgatcctcg
      241 atgcgaggtg ccttgccgac aagctcgtat ccgccgagca tcccgcacat gcgctctggg
      301 cctatgagca ggaacggctg ccgatgaccg ctcagatcgt gcagatgaac cgcaaaggcg
      361 ggccggaagg cgtcatcgac gtcgtcgaag agcttgcccc ggacggattc agcaacatcg
      421 acgatatttt gccttacgag caacgcaagg cgatcgtgcg cggctacgcg tcgacggcag
      481 gcttttcgcg cgaacaggtc aaccgtccgg caaagacggc ttaattgcca aacggcgttt
      541 gctgaaaatc gcgtgccagc ttcacgcggg cggtggcagg aagttgacct cgtgacgcgc
      601 cgacagcgcg accacctctt ccggcttctg ttctttcatc gaatggatcg ccgagaacag
      661 gtcgtagagt ctgcgggttg gcgaaaccca gaaaaagcat ttcactgtct gatcggactt
      721 gttgaaaatg ccgtgcggaa cattcatcgg catccggatg aggtcgcccg gctgcgccac
      781 gacatccttg ccgtcgagga tgagatcaag acgtccctcg aaaaggtaga tgaactcatc
      841 ttgtgttggg tggatatgcg gcggaacgaa tgttcctggg ggaaaggtcg catgccagga
      901 aaacgaactt tcgctcaacg atttcggaac gtaagtctgt cccagaatat tccagacaat
      961 gccttcgatg ccggtaccgg ccttggtgat gcctgctgtc agcgtttgca tttgtcttct
     1021 ccaatcacgg gtttaatgcc gccgccgagg cttcggctga tgcagcgctc tgtttgttca
     1081 agcatgacag caagcgtctt cccgctgtca aggcttccca ggagcgatgt ttcagattta
     1141 aggtacttct ggtgtagccc tgacagccac gtgcggacac agttcggccg acaggcaggg
     1201 gacggaggaa aacaatgaaa acgagcaagc tgtttgtgac cgttgccgca gtggcactat
     1261 ttggcttttc cggacaggcg caggaaaaat tgaaaatcgg cgttatcgcc acgttgtccg
     1321 gccctcccgc tgtgcttggt cagcagctgc gcaacggcgt tcaactcgcg gtgaaagatc
     1381 tcggcggcaa gcttggcggc cgcgaggtgg aagtgattgt gcaggacgac gaactcaaac
     1441 ccgacgtcgc tgtgtccaag gcaaaggcgc tgatcgaacg cgacaaggtc gactttctcg
     1501 tcggaccgat cttctcgaat attctgcagg cgatcttcaa gccggtgacc gacgccggcg
     1561 ttatcctcat cagcccaaac gccggcactt ccaatttcgc cggcaaggaa tgcaatgcga
     1621 actttttcgt aacgtcctat cagaacgacc aggcgttcgg agtggccggg aagtacgcac
     1681 aggacgcggg gctgaagaaa atcttcctga ttgcaccgaa ctatcaggca ggccgcgacg
     1741 cgctcgcagg gtttaagagc ttctacaagg gcgagattgc ggacgaggtc tacgttccgc
     1801 tcggccagct cgattattcg gccgagttgg cgaagatcgc cgccgccagt ccgggagcga
     1861 tctatgtgtt cctgcccggt ggcatgggca tcaatttcgt caagcagttc cggcaagccg
     1921 ggcttgccga caagacggtg ttcttgtccg cgttcacggt tgacgagtcg acgctgccag
     1981 cccagcagga cgccgcggtt ggctttttcg gcggcgccaa ctgggcgcct aatttggaca
     2041 atccgcagaa caagaagttt gtcgcgggtt acgagaagga attcggtgcg gtcccggcga
     2101 cgtacgcctt ccaatcctat gacgctgtgc tcttgatcga tggcgcgctc aagctgacca
     2161 agggcaacat cgccgacaag gacgctttac gggcagccct gaaaaaagcg gatttcacat
     2221 cgttgcgcgg cagcttcaag ttcaacacca acaactatcc gatccaggat ttctatctgg
     2281 tcaaagttgc caaacgcggc gatgggaagt tccagaccga gatcgacaaa aaggttttca
     2341 cgaacttcgc ggatccccac gccaaagact gcccgatgaa ataagagaag gtgccggact
     2401 ggtgcaatgt ccacgggcct cttcgtcgtc caggttctga acgggctcca gtttggcgtc
     2461 ctgttattcc tgatcgcagc cggtcttacg ctggtgttcg gggtgatgga tttcatcaac
     2521 ctcgcgcacg gcgtccaata catgctgggc gcgtatctgg cggtcgcttt ctatgcgctc
     2581 acgggaaatt ttctgattgc cctgctgctg gcgctcgcag cggctctctt gtttggattg
     2641 ttgctcgaat tcgtggtctt tcggcatctc tacgatcggg atcatctcga acaggtaatc
     2701 gcaactttcg gcatcatcat ctttctcaat caggcggtga aaaccgtgtg gggagccgcg
     2761 cccctgacgc tgcccattcc ggaaatgttc agcggttcga tcgtgctgat gccgggtctt
     2821 ctttacccgg tctggcgact ggttatcatc gcatcagggc ttgtcgtcgc cgtgctgctt
     2881 tatgtgcttg tcaaccgcac gcgcgtgggg atgctgattc gcgcgggcgc gacgaatgcg
     2941 cggatggtat ccgcgctcgg ggtcgacatc cgccggctgt tcatgatcct gttcggtttc
     3001 ggcacgatgc tcgccgcctt tgccggcgca atgatcgcac cgattctgtc ggtcgagccg
     3061 ggcatgggcg atagcgtgtt gatcctggcc ttcgttgtca tcgttatcgg cggaatcggg
     3121 tcgatacgcg gcgcatttct tgcggctctc ctcatcggcc ttgtcgatac gctcgggcgg
     3181 tcgtttgcca tcgatattct gcgcctggtg atgccgccct cgcctgcccg caccgtcggc
     3241 cccgccattg catcgatgct catctacgtc ctgatggcgc tcgttctgta tttccgtccc
     3301 gccggcctgt ttcccgccag gggacgctga tggcccggac aattgccgct tccagcacgg
     3361 tgcctgtgcg gcagcccgac cggccaggcc tgctcccggc gatgatattt ctcgtcctcg
     3421 cactgatacc tgctgcagcc atgctcgggc cggaaagcta cctgctcgga ctcttcaccc
     3481 gcgtgatggt gttcgcgatc gctgcaatgg cgctcgattt catctgcggc tacggcgggc
     3541 ttgtatcttt cgggcacgcc gcctttgtcg gcatcggcgc ctacacggtc ggcattctgg
     3601 gcgcgcacgg catcacggac atgctcgttt cgctgccggt cgcgttgctg gccggcgcga
     3661 tcttcgcgta cctcaccggg accgtgtgcc tgcgcaccaa gagcgtgtac ttcatcatga
     3721 tcacgctggc ctttggacaa atggcctatt tcattgccgg ctcgctcgcg ccttacggcg
     3781 gcgacgacgg cctgacaatc aggctgcgga gcacattgct tggttttccg ttcctgcaga
     3841 acgacaggac actctactac ttcgttctcc tctgccttct ccttccctat ctcatgttcc
     3901 gcgccatcgt ctattcgcgc ttcgggcgcg tctttcgcgg cacg
//
LOCUS       DATDHO010000721         2686 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_332617, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000721 DATDHO010000000
VERSION     DATDHO010000721.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2686
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332617"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..936)
                     /locus_tag="VIY07_13925"
     CDS             complement(<1..936)
                     /locus_tag="VIY07_13925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HEY6382890.1"
                     /translation="MVRAAILDDYQNVAMGFADWSPIAKDVEIKVFNKPFASQDEAIK
                     ALQGFAVVVGMRERTPFPRKMVEALPDLKLLITTGARNNSFDVKACAERGIAVCGTGS
                     VGSPTTGIAFGLMLELTRRIGFENARLKAGEAWQVTIGRDLEGLTLGILGLGRLGQRS
                     ATVGKAFGMNTIAWSQNLTAEKAEAGGAHLVTKEDLFRQADVVTIHLVLSDRSRGLVG
                     AQELGLMKKTSYLINTSRGPIVDEKSLVAALQAKSIAGAGLDVFDVEPLPLDHPFRKL
                     DNVVITPHLGYVSEQNYRKYFPDIVEDIRAWLDGKP"
     gene            complement(1016..1216)
                     /locus_tag="VIY07_13930"
     CDS             complement(1016..1216)
                     /locus_tag="VIY07_13930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382891.1"
                     /translation="MGRAILAISGSAISLLPRPFINLRTAFAGFWYDLTRDALRPYRP
                     ELHYMRGPGPACRAKHGLPPLG"
     gene            1526..>2686
                     /gene="ettA"
                     /locus_tag="VIY07_13935"
     CDS             1526..>2686
                     /gene="ettA"
                     /locus_tag="VIY07_13935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006642950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEY6382892.1"
                     /translation="MNGRQFIYHMQGLTKTYPPAKKVLDNIHLSFYPDAKIGVLGVNG
                     SGKSTLLRIMAGIDTDFAGEAWVAEGARVGYLEQEPQLDPKKTVRENVMQGVTAKKAL
                     LDRYNELASNYSDETADEMARLQDEIDSKNLWDLDSQVDQAMDALRCPPDDSDVTKLS
                     GGERRRVALCRLLLDQPDLLLLDEPTNHLDAESVNWLEGHLRNYPGAILIVTHDRYFL
                     DNVTGWILELDHGRGIPYQGNYTSWLSQKQKRMQQESREDEARQRTLVREQEWIASSP
                     KARQAKSKARYQRYEELLKIANAKQNVVAQITIPVVERLGQNVVDFDHLTKGFGENLL
                     IDDLTFKLPPGGIVGVIGPNGAGKTTLFRMITGQEKADKGTIKIGDSVRLGYV"
BASE COUNT          549 a          809 c          827 g          501 t
ORIGIN      
        1 cggtttgccg tcaagccagg cgcgaatgtc ctcgacaatg tccgggaagt atttccggta
       61 attctgctcg ctgacatagc cgagatgagg cgtgatcacg acgttgtcga gcttgcgaaa
      121 cggatgatcg agcggcaatg gttcgacgtc gaacacgtcc agccctgcgc ctgcgatcga
      181 ctttgcctgc agcgcagcta ccaggctctt ctcgtcgaca atcggcccgc gcgatgtgtt
      241 gatcaggtag gaggtctttt tcatcaggcc gagctcctgg gcgccaacca ggccgcgcga
      301 gcggtcgctc aatacaagat ggattgtcac aacgtcggcc tggcgaaaga ggtcctcctt
      361 ggtgacgagg tgcgcgccgc cagcttcggc tttctccgcc gtcaggttct ggctccaggc
      421 gatcgtgttc atgccgaagg ctttcccgac cgtggcggag cgttggccga gcctgccaag
      481 gccaagaata ccgagcgtca ggccttcaag atcccggccg atcgttacct gccaggcttc
      541 gcctgccttg agtcgcgcat tttcgaaccc gatccgcctg gtcaattcca gcatcaggcc
      601 aaaggcaata ccggtcgttg ggctcccgac ggagccggtg ccgcacacgg caattccgcg
      661 ctcggcgcat gccttgacat cgaacgaatt gttgcgggcg ccggtcgtga tcaggagctt
      721 caagtcgggc agggcctcga ccatcttgcg cgggaacggg gtccgttcgc gcatgccgac
      781 aacgaccgcg aagccctgga gggccttgat tgcctcgtcc tggctggcaa acggtttgtt
      841 gaagaccttg atctcgacat ctttcgcgat gggcgaccag tcagcgaagc ccatcgccac
      901 attttgataa tcgtcgagga tagctgcccg caccatgcga aaaccctttc aatccgtgcc
      961 cggacggccg ggccggcgcc accttaggcg tggaacgttg aaaggaaagg ggctttcaac
     1021 ccagtggggg caggccgtgc ttggcgcggc aggccggacc tgggccgcgc atgtagtgca
     1081 attccggtcg gtaagggcgg agggcgtcgc gggtcaggtc ataccagaac ccggcaaagg
     1141 cagtccgcaa attgataaag ggacgcggca acagcgaaat cgcggaaccc gatatggcca
     1201 aaattgcgcg acccatggtg cagctcctct acaccgacca gcgggcccat gcggcccacc
     1261 cgtcccttag tcgccccgca tggcgccaag gttcatgtga gcgaatgatg gcgccgaagc
     1321 ggttaagaag aggtacccga ccgggaccgg agcagctttt tttgcaggca gcctttccag
     1381 agatttaccg ggaccgttta atgtccgcgc gcttgccctt ttgagttccc gccgctacat
     1441 cagccccgca tttccccaca atgcgtgcag cgatgtttca gcgcgcgcct tcggattcgg
     1501 gctgcaagga aggcttcgag agttcatgaa cggtcgccaa ttcatctatc acatgcaggg
     1561 tctcaccaag acctatccac cggccaagaa ggtgctggat aacattcact tgtcgttcta
     1621 ccccgatgcc aagatcggcg tgcttggtgt caacgggtcc ggcaagtcga ccttgctgcg
     1681 catcatggct ggcattgaca cggactttgc gggcgaagcc tgggtcgccg aaggcgcgcg
     1741 cgtcggctac ctcgagcagg agccgcagct tgatcccaag aagaccgtcc gcgaaaatgt
     1801 catgcagggc gttaccgcca agaaggcgct gctcgaccga tacaacgaac tcgcctccaa
     1861 ctattcggac gagacggccg acgagatggc caggctgcag gatgagatcg attcaaagaa
     1921 cttgtgggat ctcgacagcc aggttgacca ggcgatggat gcgctgcgct gtccgccgga
     1981 cgattccgac gtgaccaagc tctccggcgg cgagcggcgc cgagtggcgc tttgccgatt
     2041 gctgctcgac caacccgacc ttctgctgtt ggacgagccg accaaccatc tggatgccga
     2101 gagcgtgaac tggttggaag ggcatctgcg caattatccc ggcgcgatct tgatcgtcac
     2161 ccatgaccgc tattttctcg acaatgtcac gggatggatt ctcgagctcg accacggccg
     2221 cggcatcccc taccagggca actacacgtc atggctgtcg cagaagcaga agcggatgca
     2281 gcaggagtcg cgcgaggacg aggcgcggca gcgcacattg gtgcgcgagc aggagtggat
     2341 cgcctcgtca ccgaaggcgc ggcaggccaa gtccaaggcg cgctatcagc gctacgaaga
     2401 attgctcaag attgccaacg ccaagcagaa cgtggttgcg caaatcacca tcccggtggt
     2461 cgagcggctc ggccagaacg tggtcgattt cgatcacctg acgaaagggt tcggtgaaaa
     2521 cctgctgatc gacgatctga cattcaaact gccgcccggt ggaatcgttg gcgtgatcgg
     2581 cccgaacggc gccggcaaga ccacgctgtt ccgcatgatc acgggccagg aaaaggcgga
     2641 caaagggacg atcaaaatcg gagactcggt gcgtctcggc tatgtc
//
LOCUS       DATDHO010000722         5970 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_381548, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000722 DATDHO010000000
VERSION     DATDHO010000722.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5970
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_381548"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..592)
                     /locus_tag="VIY07_13940"
     CDS             complement(<1..592)
                     /locus_tag="VIY07_13940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY6382893.1"
                     /translation="MRMFQVCVCGEPLQLNEQPTPQPTGSEVLLKVLAAGVCHSDIHL
                     SEGYFDLGGGKRLSLADRGMKLPVTLGHENVGEVVALGPQAKGVKVGDRVLAHPWIGC
                     GTCDPCKRGEENLCRAMRSLGVFTNGGYADYLMVPHPRYLFDIGDLPPERAAPLACSG
                     VTTFGALKKIATLKTEPTVIIGAGGLGLMCLALHKAM"
     gene            complement(674..1183)
                     /locus_tag="VIY07_13945"
     CDS             complement(674..1183)
                     /locus_tag="VIY07_13945"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY6382894.1"
                     /translation="MDAGELRAMQAPIKERYKSDPKTAYITLKAKGALDDSGIACKVE
                     TGRALAVAGLHPATGGSGLELCSGDMLLEALVACAGVTLKAVSTALDIPLKSGKVSAE
                     GDLDFRGTLGVAKDAPVGFAQIRLRFDLDTDAPQEKLDQLLKLTERYCVVYQTIRNGP
                     PVDLQLKRI"
     gene            complement(1247..2041)
                     /locus_tag="VIY07_13950"
     CDS             complement(1247..2041)
                     /locus_tag="VIY07_13950"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6382895.1"
                     /translation="MLVLEILGKTYPNGVRAVEGINFAVDPGEIVAVIGGSGCGKSTL
                     LRAISGLDRPTRGRVLLDGETITSPHEKIGIVFQEPRLLPWLTVADNVAFGLNDLPVS
                     RRRHRAAGALSRVGLIDKRNVWPRELSGGQAQRVAIARALVPQPEVLLLDEPFSALDA
                     FTRVDLQDHLLDLWTDLRPMMILVTHDVDEAIALADRIIVMRSRPGRIFEEIAADLRR
                     PRDRHSAAFDHVKSRVLNALDRSLVGERVPEKAAIEHPGAGAAMWW"
     gene            complement(2041..2886)
                     /locus_tag="VIY07_13955"
     CDS             complement(2041..2886)
                     /locus_tag="VIY07_13955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6382896.1"
                     /translation="MTVVSVEAAVEPATAKPAVRKSDLARYARPILGLLVPLVLAGGW
                     ELAVYFGFSNGRLVPPPSRIYAEFAELARSGELTRHVTATLLRVGAGFAAGTVVATVL
                     GALAGYSTLVRRLIDPSLQGLRAVPSIAWIPLFILWLGIFETSKIALIAVGVFFPIYL
                     GVMGAVLSVDRKIVEVGRIFRLSGPAMVRRILLPAILPAYVLALRAGLGLGWMFVIAA
                     EFMGASEGLGYLLIDGQQLGKPAEIVAALLAFAVLGKTTDWIVALAAAPFLGWEDRFS
                     RQGET"
     gene            complement(2916..3896)
                     /locus_tag="VIY07_13960"
     CDS             complement(2916..3896)
                     /locus_tag="VIY07_13960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009897 - external side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005488 - binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0042918 - alkanesulfonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY6382897.1"
                     /translation="MRHLSRRSLFASVLVVGLLPTMAVFAADKPDTINIDWATYNPVS
                     ILLKNKGWLEKEFEKDNIKIRWVQTLGSNKALEFLNAGSIDFGSSAGSAALVAKINGN
                     PIKSIYVYSRPEWTALVTRKDTSIASIADLKGKRVAVTRGTDPHIFLVRALLSAGLSE
                     KDIQPVLLQHPDGKTALIRGDVDAWAGLDPMMAQAEVEDGARLFYRNAAANTWGILNV
                     RQEFARQHPDLVKRVLAVYEEARKYSLGHYDELKAGFIAVTKLPGEVVDKQLKERTEL
                     THSKIGAPQRESILAAGLALQQAGVVPAGVDVKKTLDDLIDEQYVTAKTN"
     regulatory      complement(3991..4067)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            4225..>5970
                     /gene="glnD"
                     /locus_tag="VIY07_13965"
     CDS             4225..>5970
                     /gene="glnD"
                     /locus_tag="VIY07_13965"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEY6382898.1"
                     /translation="MASLALDDTRALERSPRGSNELIDTRALTAQLEKLVKGHTGNER
                     DLRSLLAQQLKIALADGRAKAEQLLLKDRHGRRCAERLCRMEDEVIRILFDFARQMYP
                     SQNPSEAERMAIIATGGYGRGLQAPGSDIDLLFLLPYKQTAWGESIAEAILYCLWDTG
                     LKVGHATRSVDECIRQAKADMTIRTAILESRFLFGDRKLFDELVTRFDNEVVRNTAAE
                     FVAAKLAEREDRVRRTGQSRYLVEPNVKDGKGGLRDLHTLFWIAKYVDRVREPDELIK
                     RGVFDKHEYQLFRRCEDFLWSVRCHMHFLMGRAEERLSFDIQREIAVRLGYTEHPGLQ
                     DVERFMKHYFLIAKDVGDLTAILCAELEDSHAKSVPVLSRLMARLRPVKRRPLLESDD
                     FIVDKNRIRLAQPGVLKRDPVNLIRIFHLAQKHNLAFHPDAMRVITRSLNLVDAKLRD
                     DKEANELFLDILTSKNDPETVLRRMNEAGVLGRFVPAFGKIVAMMQFNMYHHYTVDEH
                     LVRCIGALAEIESGASNDTPLANELIHKILPEHRRLLYVALFLHDIAKGRPEDHSIAG
                     ARVAKRLCPRLGFSTA"
BASE COUNT         1200 a         1874 c         1791 g         1105 t
ORIGIN      
        1 ccattgcctt gtgcaaggca agacacatga gtccgagacc gccggcgcca atgatcaccg
       61 tcggctcggt tttcagggtt gcgatctttt tcaacgcgcc aaacgtggtg acaccggagc
      121 aagcgagcgg ggcggcgcgt tccggcggaa gatcgccgat atcgaacagg tagcgcggat
      181 gcggcaccat caggtagtcc gcgtacccgc cgttcgtaaa aacgccgagg ctgcgcatcg
      241 cgcggcaaag attttcctcg ccccgcttgc agggatcgca ggtcccgcac ccgatccatg
      301 gatgtgcgag cacccggtca ccgaccttga ctcccttggc ctgcggacca agcgcgacca
      361 cttcgccgac attctcgtga ccgagagtaa cgggcagctt catgccccgg tcggcaagac
      421 tcaggcgctt gccgccgccg aggtcgaaat acccttccga caggtggata tcgctatggc
      481 agacgccggc cgccaaaacc ttcaacagga cttcgctgcc ggtcggctgc ggcgttggct
      541 gttcgttgag ctgcaggggc tcgccgcaaa cacaaacctg gaacatacgc atcggacgct
      601 ctcccgattt tttctcgttc tcgggggggc agcgaaccac agtccgcagc ccgcgtcact
      661 agcgggaaga agcctagatg cgtttcaact gcaggtcgac cggtggcccg ttcctgatcg
      721 tctgataaac aacgcagtag cgctcggtca gcttgaggag ctggtcaagc ttttcctgcg
      781 gcgcatcggt atcgagatcg aagcgcaacc ggatctgggc aaagccgacc ggcgcatcct
      841 tggcgacgcc gagcgtgccg cggaagtcga gatccccttc ggcggagact tttcctgact
      901 tcaggggaat atcgagcgca gtcgacaccg ccttcagcgt gacaccggcg cacgcaacga
      961 gagcctccag gagcatgtcg cccgagcaaa gctcgagacc tgaccctccg gtcgcaggat
     1021 gaaggcccgc gacggccagc gcgcggccgg tttcgacctt gcacgcgatg ccgctgtcat
     1081 cgagcgctcc tttggccttc agcgtgatgt aggccgtctt cggatcgctc ttgtagcgtt
     1141 ccttgatcgg cgcctgcatc gcgcgcaatt cacctgcatc catgtacttc tcccttgcgt
     1201 gcaacggggg aacctacagg ctcgatacgg cgaaacacaa gggcggctac caccacatgg
     1261 ctgcgccggc tccgggatgc tcgatcgcgg ccttttccgg aacacgctcg ccgacaagcg
     1321 agcggtcgag cgcattgagc acgcgcgact tgacgtgatc gaacgcagcg gagtggcggt
     1381 cgcgcgggcg gcgcagatcc gctgcgatct cctcgaagat gcggccggga cgcgaccgca
     1441 tcacgatgat gcgatcagcc agggcgatag cttcgtcaac gtcgtgagtg acgaggatca
     1501 tcatcggccg cagatcggtc cacagatcga gcagatgatc ctgcagatcg acccgtgtga
     1561 acgcatcgag cgcggagaac ggttcgtcaa gcagcaatac ttcgggctgc gggaccagtg
     1621 cacgcgcaat ggcgacgcgc tgcgcctgac cgcctgacaa ttcgcgcggc cagacgtttc
     1681 gtttgtcgat caagcccacg cgtgacagcg caccggcagc gcgatggcgc cgccgcgaaa
     1741 caggcaggtc gttcagccca aaagcgacat tgtcggcgac cgtcagccac ggcagcaggc
     1801 gcggttcctg gaagacaatg ccgatcttct cgtgtggcga ggtgatcgtc tctccatcga
     1861 gtaaaacgcg acccctggtc ggccggtcga gtccgctgat ggcgcgcagt aaagtcgact
     1921 tcccgcagcc ggaaccgccg atcacggcga caatctcccc gggatcgact gcaaagttga
     1981 tgccctcgac ggcgcgcacg ccgttcggat aagtcttgcc gagaatttcc agcaccagca
     2041 tcaggtctct ccctgacgcg agaaacgatc ttcccagccc aggaaaggcg ctgcggcaag
     2101 ggcgacaatc cagtccgtgg tttttcccag aacggcaaag gcgagaagcg cggccacgat
     2161 ttccgcgggc ttgccgagct gctgtccgtc gatcagcaaa tagccgagac cctcggaggc
     2221 gcccatgaat tcggcggcga taacgaacat ccagccgagc cccagacccg cgcgcagcgc
     2281 gagcacgtac gcgggcaaga tcgccggcaa aaggatccgc cgcaccatgg ccgggccgga
     2341 cagccgaaag atgcgcccga cttcgacgat cttgcggtcg accgacagga ccgcacccat
     2401 gacgccgagg taaatgggga aaaacacgcc gaccgcgatc agcgcgatct tggacgtttc
     2461 gaaaattccc agccacagga tgaacaacgg gatccaggcg atcgaaggaa ccgcgcgcag
     2521 tccctgcagg ctgggatcga tcaatcgccg caccaacgtc gaatagcccg caagcgcacc
     2581 cagcacggtg gcaaccaccg tgcccgcggc aaacccggcg ccgacacgca gcaatgtcgc
     2641 ggtgacatgc cgcgtcagtt cgccggaacg cgccagctcg gcaaattccg cgtaaatgcg
     2701 cgacggaggc gggacgaggc gtccgttcga gaagccaaag tagacggcca actcccagcc
     2761 acctgccaga acgagcggca ccaacaggcc gagaattggc cgcgcatatc gcgcaagatc
     2821 gctcttgcgc accgccggtt tcgcggttgc cggttcgaca gctgcttcca cggacaccac
     2881 agtcatcaaa ccactcgcga aaggcaaggc ggggatcagt tcgtcttcgc cgtgacgtat
     2941 tgttcgtcga tcagatcgtc gagcgtcttt ttcacgtcga caccggccgg gacaacaccg
     3001 gcctgttgca gcgcgagccc ggcggcaaga atggactcgc gctgcggcgc tccgatcttg
     3061 ctatgcgtga gctcggtgcg ttccttgagc tgcttgtcga cgacctcgcc gggcaacttg
     3121 gtcaccgcga tgaacccggc cttcagctcg tcatagtggc ccaacgaata ttttcgcgcc
     3181 tcctcgtaaa cggcgagcac gcgtttcacc agatcgggat gttgccgggc aaattcctga
     3241 cgaacgttga gtatgcccca ggtgttggcg gcggcattcc gatagaagag tctggcgccg
     3301 tcttcgacct cggcttgtgc catcattgga tcgagccccg cccaggcatc gacgtcgcct
     3361 cggatcagcg cggtcttgcc gtcggggtgc tgcagcagca ccggctggat gtccttttcg
     3421 ctcaagccgg cgctgagcaa cgcgcgcacg agaaaaatgt gcgggtcggt gccccgcgtc
     3481 acggccacgc gcttgccctt gaggtccgcg atgctcgcga tcgaggtgtc cttgcgcgtg
     3541 accagcgccg tccattccgg ccgcgaatag acatagatcg acttgatcgg gttgccgttg
     3601 atctttgcca ccagggcggc tgagcccgcg ctcgagccga aatcgatcga gccggcattg
     3661 aggaattcaa gagccttgtt tgatccgagc gtctgcaccc agcggatctt gatgttgtcc
     3721 ttctcgaact ccttttccag ccagcccttg ttcttgagca ggatggagac cggattgtat
     3781 gtcgcccaat cgatattgat ggtgtccggc ttgtcggctg cgaagaccgc catggtcggc
     3841 agcaggccga ccaccagaac ggaggcaaag agcgaacgac gggacagatg acgcatggca
     3901 aaactcctcg catttgcagg cacccgcgct tgccggcgcc ggcgccttcg tgaacggaag
     3961 gcggatcgat tgatccgccg tcagctggcg aggggatttg ccccgcgctt tagctggatt
     4021 tgttaagcgc ccgcaagctg cttgctcaaa tcggcgctag aaatattcta taaacactgg
     4081 atattacttg gtcaaaagga gaatattatc taattattgc caacggtagt atttatttcc
     4141 aaacctttcg gtgagcttgt aggcaattat ctttgctcgc aacgatgact tcaaggtctg
     4201 tctccgctat ctccgacgat gcaaatggct tcacttgccc tcgatgacac gcgcgctctc
     4261 gaacgttccc cgcggggttc gaacgaattg atcgacacgc gcgccctgac tgcccagctt
     4321 gaaaagcttg tgaagggaca caccggcaac gagcgtgacc tgcggtcatt gctggcgcaa
     4381 cagctgaaga tcgccctcgc cgatggccgc gccaaagccg aacagctgct gctgaaagac
     4441 cgtcacggcc ggcgctgtgc cgagcggctt tgccggatgg aagacgaggt catccgcatc
     4501 ctgttcgact tcgcgcgtca gatgtacccc tcgcaaaatc cgtcagaggc cgagcgcatg
     4561 gcgatcattg ccaccggcgg ctacggccgc gggttgcagg cgccgggctc cgacatcgat
     4621 ctgctgttcc tgctgcccta caagcaaacg gcctggggcg agtcgatcgc cgaggcgatt
     4681 ctctattgtc tgtgggacac gggactgaag gtcgggcatg ccacccgctc cgtcgacgaa
     4741 tgcatccgcc aggccaaggc ggacatgacg attcgcaccg ccattcttga atcgcgcttt
     4801 cttttcggcg accgcaagct cttcgacgag ctggtgacac gattcgacaa cgaggttgtg
     4861 cgtaacaccg ccgccgagtt cgtcgcggcc aagctcgccg agcgcgagga tcgcgtccgc
     4921 cgcaccggac aatcgcggta cctggtcgag ccgaacgtga aggatggcaa gggcggacta
     4981 cgcgacctgc acacactgtt ctggatcgcg aaatacgttg accgcgtccg cgagcccgac
     5041 gaattgatca agcgcggagt gttcgacaag cacgagtatc agctgttccg ccgctgcgag
     5101 gacttccttt ggtcggttcg ctgccacatg cattttctca tgggccgcgc cgaagaacgc
     5161 ctgtcgttcg acatccagcg cgagatcgcc gtgcgtcttg gctataccga gcatccgggt
     5221 ctgcaggacg tcgagcgctt catgaagcac tacttcctga tcgccaagga cgtcggggat
     5281 ttgaccgcca tcctctgcgc ggagcttgaa gacagccacg ccaagagcgt gccggtgtta
     5341 agccggctga tggcgcgact gcgcccggtg aagcggcgcc cgcttctgga aagcgacgat
     5401 ttcatcgtcg acaagaatcg cattcggctt gcgcaaccgg gcgtattgaa gcgcgatcct
     5461 gtcaatctga tccgtatatt tcatctggcg cagaagcata acctcgcgtt ccatccggac
     5521 gcgatgcgcg tcatcacgcg ctccctgaat cttgtcgatg ccaaattgcg tgacgacaag
     5581 gaagccaacg aattgttcct tgacatcctc acctcgaaga atgacccgga aaccgttttg
     5641 cgtcggatga acgaagccgg cgttcttggc cgtttcgtgc cggcgttcgg caagatcgtc
     5701 gccatgatgc aattcaatat gtaccaccac tacaccgtgg atgagcatct ggtgcgatgc
     5761 atcggcgcgc ttgccgaaat cgaaagtggt gccagcaacg atacgccact cgccaacgag
     5821 ttgatccaca aaatcttgcc ggagcatcgc cgcttgctgt atgtcgcgct gttcctgcat
     5881 gacatcgcga aaggacgtcc ggaggatcat tcgattgccg gggcccgcgt tgcaaagcga
     5941 ttgtgcccgc ggctgggatt ttcgaccgcc
//
LOCUS       DATDHO010000723         5319 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_332765, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000723 DATDHO010000000
VERSION     DATDHO010000723.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5319)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5319)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5319
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_332765"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(29..1666)
                     /locus_tag="VIY07_13970"
     CDS             complement(29..1666)
                     /locus_tag="VIY07_13970"
                     /EC_number="1.2.7.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylmethanofuran dehydrogenase subunit A"
                     /protein_id="HEY6382899.1"
                     /translation="MLTRLVGGRVIDPQNGRDAVGDIFIRDGRIVDAPPSGTADETYN
                     VSNKIVMAGAIDVHSHIAGNNETMGRLSLPEERYPSDVVHPGHFPQPRGSWNTFETGR
                     IYATMGFTTVVEPAVLPHHAMQAHLELADIPIIDKATLTVLGNDDFLLNLLHRREGPD
                     AMRDYVAWTLAASRGLGIKVINAGGVAAFKDNLREFALDDEVPGYGVSSRTILKALQR
                     AVHELKLPHRLHVHCNNLGIAGNVETALATIAAAEDLPLHLAHLQFYGYGKEGPRGFS
                     SGGARLAEAVNAAGSVTVDVGQVMFGQTVTISCDVLRQFNARNGARPKKWMICDGDSN
                     GGGIVPYNYRGTDFFNAVQWAVGLELFLLTKDPWRVFFTTDHPNGAPFTAYPDILALL
                     MNRDLRAEWISRLPKEAMAVTTLASIAREYTLAEVAIMTRAAPARLLGLTDRGHLGPG
                     ALADVAVYETGTDKARMFREAALVFKDGQLIVRDGALLDYPTGRTLSVHTERERAMER
                     RMRDYYEERYGLSPDFMTVADAAIGRPESFETIPCLS"
     gene            complement(1660..2727)
                     /locus_tag="VIY07_13975"
     CDS             complement(1660..2727)
                     /locus_tag="VIY07_13975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tungsten formylmethanofuran dehydrogenase"
                     /protein_id="HEY6382900.1"
                     /translation="MAEAWIRSKSAALDAAIAQAAGLLGASRLPVIAGLGTDVAGARA
                     AIKLAQSVGGVVDHMHSEALLRDLDVMREAGMMMTTPNEARLRADFLLLVGPGLIEAW
                     PALPERLFANRRTVWLCPDAAAKPENRYQNMVVVGDNPRDLPVILAALRARCVGRPVA
                     HPPLALATIDSLMAELRKVRFGVAIWSAAQHDGLVIEMLCGLVDDLNKGTRFSGLPLA
                     PADNAAAVQQVAGWMSGFPLRTGFGRRLPEHDPWRFEASRLIDSGEADCAVWISAYGA
                     RSPTWKRNLPLVALTARPDTLGADVTIAVGRPGIDHDAVEHLAATATLSAVSASKPSA
                     ATSVASVIGKIRAALPAARPC"
     gene            complement(2784..3170)
                     /locus_tag="VIY07_13980"
     CDS             complement(2784..3170)
                     /locus_tag="VIY07_13980"
                     /EC_number="4.2.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008124 -
                     4-alpha-hydroxytetrahydrobiopterin dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006729 - tetrahydrobiopterin biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HEY6382901.1"
                     /translation="MTAQAIKERTYSEDEIKARLARDLPHWWLENGWIRRKYRTNSWK
                     GTLMVINAVGHLAEAAWHHPDITASYAWVEVRLQNHAAKGITDKDFELAKKIEEIVQW
                     QPANEGGSLEGTPQQDARFAYIKYDK"
     gene            3289..4275
                     /locus_tag="VIY07_13985"
     CDS             3289..4275
                     /locus_tag="VIY07_13985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ribofuranosylaminobenzene 5'-phosphate
                     synthase family protein"
                     /protein_id="HEY6382902.1"
                     /translation="MSRGPNSVTVTASARLHLGFLDLNGGLGRSFGSFGLAISDLHTR
                     AVISKAAVARVTGPDSERARRYLERLQVVLSLDGAHHVHIAEAIPGHSGLGSGTQLAL
                     AIAAGIRTLHNMPLDIRGDAFRLGRGRRSGVGIGLFDLGGVVVDAGCGDRTRVAPIVS
                     RIPFPDEWRILLVLDRKRIGVHGEEESVTFARLPAFAATDAAHICRLVLMQALPALAE
                     ADLVSFATAIKQMQRILGAYFAPLQGGHPFASPDVAAALELLEDEGALGIGQSSWGPT
                     GFAFVRSPDEAKRLIAFARNHPRCETLDIIACKGLNRGADIEVALVAAMPDL"
     gene            4294..5190
                     /locus_tag="VIY07_13990"
     CDS             4294..5190
                     /locus_tag="VIY07_13990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004448482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent
                     methylenetetrahydromethanopterin dehydrogenase"
                     /protein_id="HEY6382903.1"
                     /translation="MAEKHILHMLTPLRHMSPFDVNMALDAGFDAAIPHTNVTLAEVT
                     GLVQDAIFSRPPKMGVRTGIFFGGRQAIMALDMLETAKKALVPPFGISFFADPAGSFT
                     TAAAMVACVEKLLREKKRRQLKGVRVAVFGATGVVGFSAAVIAALQGADVTLVGYDGI
                     KRVSDGAAEIKARFGVEVRAADGSDEEKKIRILSVNEVALCAGRAGVQILSRAQLEAA
                     KDLFIVADVNAVPPPGVEGLDMMANGSEVNSHGTLGVGPLAIGNIKYKTEFGLFKKMI
                     EATKPVCLDFRDAFTLAHELNG"
     gene            5183..>5319
                     /locus_tag="VIY07_13995"
     CDS             5183..>5319
                     /locus_tag="VIY07_13995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrahydromethanopterin C1 transfer protein"
                     /protein_id="HEY6382904.1"
                     /translation="MDKGLVLIAAPSGRALAASARRSGYVPLVADGFGDQDTIAAAAA
                     H"
BASE COUNT         1018 a         1557 c         1626 g         1118 t
ORIGIN      
        1 gtgtcatcca ctcggatgcc gttcacggtc aactgagaca tggaatggtt tcgaaagact
       61 ccgggcggcc aattgctgcg tcggccactg tcataaagtc gggtgaaagt ccgtagcgtt
      121 cctcatagta gtcgcgcatg cgccgctcca tcgcgcgctc gcgttcggtg tgcacgctga
      181 gggtgcgacc ggtgggatag tcgagtagcg cgccatctcg cacgataagc tgcccgtcct
      241 tgaacacgag tgcggcctcg cggaacatcc tggctttgtc ggtgccggtc tcgtagaccg
      301 caacatcggc gagcgcacca ggaccaagat ggccgcggtc cgtgaggccg agaagtctgg
      361 ccggtgcggc gcgcgtcatg atcgcaactt cggcaagggt gtattcgcgg gcaatagagg
      421 ccagtgtagt cactgccatc gcctcttttg gcaggcgcga tatccattcc gcccgcaaat
      481 cgcggttcat aagcagcgcc agaatatcgg ggtaggcagt gaatggtgcg ccgttgggat
      541 gatcggtggt gaagaacacg cgccagggat ctttcgttaa taagaacagt tcgaggccca
      601 ccgcccactg gactgcgttg aagaaatcgg tgccccgata attgtagggt acaatgccgc
      661 cgccgttgga atccccgtcg caaatcatcc atttcttcgg acgcgccccg ttgcgggcgt
      721 taaactgtcg cagcacatcg catgaaatcg tgacggtctg tccgaacatg acttggccga
      781 cgtcgacagt cacggacccg gccgcgttta ccgcctccgc cagacgtgca ccgccggagg
      841 agaagccgcg agggccttcc ttgccatagc cataaaattg cagatgcgcg agatgcagcg
      901 gaaggtcttc cgcagcagcg atagtcgcca gcgcggtctc gacattgcca gctatgccca
      961 gattgttgca atggacgtgc agccgatggg gcagtttcag ttcgtgcacc gcccgttgaa
     1021 gtgctttcaa aatggtgcgt gacgatacgc cgtaaccggg cacttcatcg tcgagcgcga
     1081 actcgcgcaa attgtccttg aaggctgcca cgcctcctgc gttgatgacc ttgatgccaa
     1141 gtccgcgaga tgcggcgagt gtccaggcca catagtcgcg catggcatca gggccctcgc
     1201 ggcgatgcag gaggttgagc agaaaatcgt catttccgag caccgtcagc gttgctttgt
     1261 cgatgatcgg aatgtcggcc aattcaagat gcgcctgcat ggcgtgatgc ggcagcaccg
     1321 cgggttcaac gacggtcgta aagcccatcg ttgcgtagat tcggccggtc tcgaaggtat
     1381 tccaactccc ccgcggctgc gggaagtgac cgggatgaac gacatctgaa gggtaacgct
     1441 cttcaggcaa cgacagacgg cccatcgtct cgttgttgcc cgcgatgtgg gaatgcacgt
     1501 cgatagcgcc ggccatgacg atcttgtttg aaacattata tgtttcgtcc gcagtaccgc
     1561 tgggcggcgc atcgacgata cgtccgtcac ggatgaaaat atccccgacg gcatcgcgcc
     1621 cgttctgcgg gtcgatcacg cgtccaccga caagccgggt caacatggcc gtgccgctgg
     1681 cagcgccgcc ctgatcttgc cgataacgct tgccacggac gttgcagcac tcggtttgct
     1741 ggcgctcacc gcggaaagcg ttgcggttgc cgcaagatgc tcgactgcat cgtggtcaat
     1801 accgggccgg ccgacggcga tcgtgacatc ggcccccagc gtgtcgggcc tggcggtgag
     1861 tgcgacaagc ggcaggttgc gcttccaagt tggcgaccgc gcgccataag cggaaatcca
     1921 tactgcgcaa tcagcttcgc cactatcgat gaggcgcgat gcttcgaagc gccaggggtc
     1981 gtgctccggc agcctgcggc caaaccctgt gcgcaaagga aagccgctca tccaaccggc
     2041 gacctgttgc accgcggcgg cattgtccgc gggtgcgagc ggcaggccgg aaaagcgcgt
     2101 ccctttgtta agatcgtcca ccaggccgca taacatctcg atgacgaggc cgtcgtgctg
     2161 agctgccgac catattgcaa ctccgaagcg aacttttctc aattcagcca tgagcgaatc
     2221 gattgtcgct aaggcaagcg gtggatgcgc cactggtctt ccgacacacc gcgctcgcag
     2281 ggcggcgagg ataactggca agtcacgggg attgtcgccg acgacgacca tattttgata
     2341 tctgttttca ggcttggctg cagcgtccgg gcaaagccag acggtacggc gattggcaaa
     2401 cagcctttcg ggtaaggcgg gccacgcttc aatcaatccg gggccgacca gcaggagaaa
     2461 gtccgcgcgc aggcgcgctt cgtttggcgt ggtcatcatc attccggctt cgcgcatgac
     2521 atcgaggtca cgcagcagcg cctcggaatg catgtgatcg actacaccgc ccacgctttg
     2581 cgccagtttg atagcggcgc gagctccggc aacatcggtg ccgaggccgg caatgaccgg
     2641 taagcggcta gcccccaaga gacctgctgc ttgcgcgatc gctgcatcga gcgcagctga
     2701 cttgctgcga atccaagctt cagccatgcc gtatcctgtc gtgcggcgtg gtcggttcag
     2761 tcaatctgtt gttgcgtccg accctacttg tcgtacttga tataggcgaa gcgtgcatcc
     2821 tgttgcggcg tgccttccag cgagcctcct tcattggcgg gctgccactg aacgatctct
     2881 tcgatctttt tggccaattc gaaatccttg tcggtgatcc ctttagccgc gtggttctgc
     2941 aggcgcacct cgacccaggc gtaggaagcc gtgatgtcgg ggtggtgcca cgctgcttca
     3001 gccaaatggc ccactgcgtt gatgaccatc aacgtgcctt tccagctgtt ggtgcggtac
     3061 ttgcgacgaa tccagccgtt ttccaaccac caatgcggca agtcgcgggc gagtcgcgcc
     3121 ttgatctcgt cttcgctgta tgtgcgttcc ttgattgctt gtgccgtcat gatgagaagc
     3181 ctttctcgta ggcgatcaat ccgatctgtt cggattgcca agcgagtcca actgtcgcag
     3241 tctagtcctg gtttgcatag atgaaaaacc ctgtccggga gcaaacagtt gagtagaggg
     3301 ccgaacagcg tgaccgttac tgcttcggct aggctgcatt tgggattcct tgatctaaac
     3361 ggcgggcttg gacgaagttt cggcagcttc ggtcttgcga tcagcgacct gcacacgcgc
     3421 gctgtcattt ccaaagcggc ggtggcacgg gtgaccggcc cagacagcga acgcgcgcgt
     3481 cgttatctcg aacgtctgca agtggtgctc tcgcttgacg gtgcacatca cgtgcacatt
     3541 gcagaagcta ttccgggtca ttccggactt ggctccggca cgcagctcgc gcttgcaatt
     3601 gccgccggta tccgcacgct acacaacatg ccactcgaca tccgtggcga tgcatttcgg
     3661 cttgggcgcg gccgtcgttc aggcgtaggt atcggtctat tcgatttggg cggcgtcgtg
     3721 gttgacgccg gatgtggaga cagaacgcgc gtggcgccaa tcgtcagccg aatacctttc
     3781 ccggacgaat ggcgcatcct gctcgttctc gaccgcaaac gcattggcgt gcatggagaa
     3841 gaggagagcg tgacgtttgc tcgtttgccg gcatttgccg ctacggacgc tgcgcacatc
     3901 tgccgccttg tgttaatgca ggccctaccg gcgcttgcgg aggcggatct cgtttctttt
     3961 gccacggcaa tcaagcagat gcagagaatt ctcggcgcgt attttgcacc gctgcaaggg
     4021 ggacatccat ttgccagccc cgatgtcgcc gcggcgctcg agcttcttga agatgaagga
     4081 gcgctcggca tcggtcagag ttcgtggggc ccgactggat tcgcatttgt gcgttcgcct
     4141 gatgaagcga aacgtttgat tgccttcgcg cgcaaccatc cgcgctgcga aaccctggac
     4201 atcatcgctt gcaaggggct caatcgcggc gcagatatag aagttgccct ggttgcggcg
     4261 atgcctgatc tgtgatctgg ccaggaggcg gatgtggctg aaaagcatat cctgcacatg
     4321 ctgaccccgc tcaggcatat gagccccttc gatgtgaata tggctctcga cgccggtttt
     4381 gacgccgcca ttccgcatac caacgtcacg ctcgcggaag tgaccggtct ggtacaggac
     4441 gcaatcttct ctcgccctcc gaaaatgggc gtcaggacag gcatcttctt tgggggcagg
     4501 caagcgataa tggcactgga catgctcgag accgccaaga aggcgctcgt gccgccattc
     4561 ggtatttcgt tcttcgccga tcctgcaggc tcctttacta cggcggctgc aatggtcgcc
     4621 tgcgttgaga agttgctacg tgaaaagaaa cgcaggcaac tcaaaggtgt tcgcgtcgcg
     4681 gtgttcggcg caaccggcgt cgtgggattt tccgccgccg tcatcgcggc cctgcaaggc
     4741 gccgatgtca cgcttgtcgg ctatgatggc atcaagcgcg tgagcgacgg agccgccgaa
     4801 atcaaagcac gcttcggcgt cgaagttcgt gccgccgacg gtagtgacga ggaaaagaaa
     4861 atccgaatcc tgtcggtgaa cgaagttgcc ttgtgtgccg gccgcgctgg cgtgcaaatc
     4921 ctgtcgcgcg cgcaactcga ggcggcgaaa gaccttttca tcgtcgccga cgtgaatgcg
     4981 gttccacctc ccggtgtcga aggcctcgat atgatggcaa atgggagcga agttaattcg
     5041 catggcaccc tgggcgtggg tccgctcgcg atcggtaaca tcaagtacaa gaccgagttt
     5101 ggcttgttca agaagatgat cgaagcgaca aagcccgtgt gtttggattt tcgcgacgcg
     5161 ttcacgcttg ctcacgaact caatggataa aggtctcgtg ctgatagccg ctccctcggg
     5221 ccgagcgctt gccgcgtcgg cgcggcggag cgggtacgtg ccgctggttg ccgacggttt
     5281 cggcgatcag gatacgatcg ccgctgccgc cgcccacat
//
LOCUS       DATDHO010000724         2295 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_34345, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000724 DATDHO010000000
VERSION     DATDHO010000724.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2295
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_34345"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VIY07_14000"
     CDS             complement(<1..204)
                     /locus_tag="VIY07_14000"
                     /inference="COORDINATES: protein motif:HMM:TIGR00072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation protease"
                     /protein_id="HEY6382905.1"
                     /translation="MVHVICFGNLWQGADGFGVRVFQRLSDRSDWPAHIKIFEAGTAG
                     LAALDYFEGCRKVVIVDALKTGGT"
     gene            complement(204..1739)
                     /locus_tag="VIY07_14005"
     CDS             complement(204..1739)
                     /locus_tag="VIY07_14005"
                     /inference="COORDINATES: protein motif:HMM:NF012592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-dependent hydrogenase large subunit"
                     /protein_id="HEY6382906.1"
                     /translation="MARRIIKMGLNRVEGDLEIKLEVDDHTVTDAWCVGTMYRGFEQI
                     LVGRDPKDALVITPRICGICSTSQLYAATSALEVAFQSPLAPNGTRIRNLCLMAEAVM
                     SDARHTFLVFASDLCNEAYRGQPLYDEALALFQPLFKGRVANETVQNSKQILGIVIAF
                     GGQWPHATYMSPGGVTCELTSETLAACLTAIDSYTEWYEQVVLGCNSERWLALRTMDD
                     FFAWLDEDEARQRSAVGVFTRFGRALGLHQTGLGTPHLLSAGCYYDPEQWRPPFAERH
                     CLLPAGFYNGQTRQVEPFDPGEVAEHVRYSWYVDYGGGRHPLEGETQPDYQPESDRYT
                     FAKAPRYRDQVVQLGPLSELVIAGDSLLTSIFQAEGANTWLRQFARLHRPVSLLQQMR
                     RTVIELRQHFSEPTFIKSDSGTEGAGCGLINAARGSLGHWVKIKNGRIANYQVITPTS
                     WNGSPRDSSGRRGHWEESFIGLEIKDLDNPIELCHVVRSHDACLVCTVHFTKSGKKRT
                     FLV"
     gene            complement(1768..>2295)
                     /locus_tag="VIY07_14010"
     CDS             complement(1768..>2295)
                     /locus_tag="VIY07_14010"
                     /inference="COORDINATES: protein motif:HMM:NF013242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382907.1"
                     /translation="PHGTGMYDTFDGRPKREIISELCAQAEYVIAMGVCAAFGGIPAA
                     PPNPTESCGLQFTNEKPGGLLGPGWRSKAGLPVINISGCPADAKTMIKTMSLILDGAS
                     LELDKFNRPVTVVPCLSDGVNKRCGTAEKVGYSCVGCIGAKFPLNKPLFRQVERPKKE
                     PEALPHCEMLFLPAG"
BASE COUNT          477 a          704 c          658 g          456 t
ORIGIN      
        1 cgtgccgcca gtcttgagcg cgtcgacgat caccactttg cggcatcctt caaagtaatc
       61 gagggctgcg agtcccgccg tgcccgcttc gaaaattttg atgtgagcgg gccaatcgct
      121 ccggtcagat aagcgctgaa acacccgaac gccaaagccg tcggcgcctt gccagagatt
      181 gccgaagcag attacatgaa ccatcaaacg agaaaagtcc tcttcttccc gctcttcgtg
      241 aaatgcactg tgcagacgag gcacgcgtcg tgagagcgga cgacgtgaca caattcaatc
      301 ggattatcga ggtctttgat ctcaaggccg atgaagctct cctcccagtg cccgcggcgg
      361 cccgatgaat cgcgcggaga gccgttccaa ctggtcggcg tgatcacctg gtaattggcg
      421 atccggccgt ttttgatctt cacccaatgc cccaggctac cgcgcgcggc gttgatcaag
      481 ccacaaccgg cgccctcagt tcccgagtcc gatttgatga aggtcggctc gctgaagtgt
      541 tgccgcagct cgatcactgt gcgtcgcatt tgctgaagca gagagacggg ccggtggagc
      601 cgcgcgaatt gccttagcca ggtattcgcg ccctccgcct gaaagatgga agttagcaat
      661 gagtctccgg caatcaccag ttctgacagg ggaccgagtt gcacgacctg atcacggtag
      721 cgtggggcct tggcaaatgt gtaacgatcg ctctccggtt gataatctgg ctgtgtttcg
      781 ccctccaacg gatggcgtcc gccaccataa tcaacgtacc aggagtagcg cacatgctca
      841 gcgacctcgc ccgggtcgaa gggttcgacc tggcgcgtct gcccgttgta gaaaccggca
      901 ggtagcaggc aatggcgttc tgcgaatggc gggcgccatt gttcgggatc gtaataacag
      961 ccggcgctaa gcaaatgcgg tgtgcccaag ccagtctgat gcaggccgag cgcgcggccg
     1021 aagcgcgtga agacgcccac ggcgctccgc tgacgagctt cgtcctcatc gagccacgcg
     1081 aaaaagtcat ccatcgtgcg aagcgcgagc catcgctctg agttacagcc cagcaccacc
     1141 tgctcgtacc attccgtata ggagtcaatc gccgtcagac aggccgccag agtctccgac
     1201 gtcagctcgc atgtcacgcc gcccggcgac atataagtcg catggggcca ctggcctccg
     1261 aaggcgatga caatgcccag aatctgtttt gaattttgga cggtctcgtt ggcgacgcgc
     1321 cctttgaaca gaggctgaaa gagggcgagc gcctcgtcat aaagtggctg acctcgatac
     1381 gcctcattgc agaggtcaga cgcgaacacc aggaacgtat gtcgcgcatc gctcatcacc
     1441 gcctccgcca tcagacaaag attgcgaatg cgtgtgccgt taggggccag cggagattga
     1501 aaagccactt ccagcgccga ggtggcggcg tagagctgcg acgtgctgca aatgccgcag
     1561 atgcgcggcg tgatgaccag cgcgtctttg ggatcgcgcc caaccagaat ctgctcaaag
     1621 ccgcgataca tcgtgcccac gcaccaggcg tcggtgaccg tgtggtcgtc gacctccaac
     1681 ttgatttcga ggtcaccttc gacacgattc agacccatct tgataattcg cctagccatt
     1741 ccccgattcc ccacctccgg cggactgtca gccggctggc aaaaataaca tttcgcaatg
     1801 cgggagagcc tctggttcct tcttcggccg ctccacctgg cggaacagcg gcttgttaag
     1861 agggaacttc gcgccgatgc acccgacgca ggaataaccg actttctcgg ctgtcccgca
     1921 gcgcttattg acaccgtccg acaagcatgg gacgacggtc actggccgat tgaatttgtc
     1981 gagttcgagc gacgctccgt caaggatcag gctcatggtc ttgatcatcg ttttggcgtc
     2041 cgccgggcaa cccgaaatat tgattaccgg caaacccgct ttcgatctcc accctgggcc
     2101 gagcaggccg ccaggctttt cgttggtgaa ttgcagacca cagctctcgg tgggattcgg
     2161 gggcgctgca ggaatcccac cgaaggcggc gcaaaccccc atcgcgatca catattcggc
     2221 ctgggcgcat aactcgctga tgatctcgcg ctttggccgg ccgtcaaatg tatcgtacat
     2281 ccccgttccg tgcgg
//
LOCUS       DATDHO010000725         5002 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_233015, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000725 DATDHO010000000
VERSION     DATDHO010000725.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5002
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233015"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1708
                     /locus_tag="VIY07_14015"
     CDS             <1..1708
                     /locus_tag="VIY07_14015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY6382908.1"
                     /translation="ASNLLKPALARGELHCIGATTLDEYKKHVEKDAALARRFQPVYV
                     SEPSVEDTISILRGLKDKYEQHHGVRIADSAIVAAATLSHRYITDRFLPDKAIDLIDE
                     AAARLKMQVDSKPEELDSIDREIVRLKIEQEALKKESDPGSKDRLKRLENELKELEKR
                     SADLTGRWKSEKEKLSDAQKLKTELDQLRAELANAQRRGEFQRAGELAYGRIPELEKK
                     LSAIEASDGKGAMVEETVTADHVAHVVSRWTGVPVDRMLEGEKEKLLRMEDELAKRVI
                     GQQDAVRAVSTAVRRARAGLQDPRRPIGSFMFLGPTGVGKTELTKALAEYLFDDENAL
                     IRIDMSEYMEKHAVARLIGAPPGYVGYEEGGALTEAVRRRPYQVVLFDEIEKAHPDVF
                     NVLLQVLDDGRLTDGQGHTVDFRNTLIVMTSNLGSEFLVNQPEGQDTDAVKDEVMAVV
                     RAAFRPEFLNRVDEIILFHRLKKADMGKIVDIQIARLQKLLDDRKIVLKLDAKARDWL
                     AEKGWDPAYGARPLKRVIQKSVQDPLAEMILAGNIKDGETVKLSADKLGLTFNGKLAQ
                     AA"
     gene            complement(1775..3754)
                     /locus_tag="VIY07_14020"
     CDS             complement(1775..3754)
                     /locus_tag="VIY07_14020"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEY6382909.1"
                     /translation="MDQTRSRGAPRSRQAEAIELGNEPPMSVDGGSSGFVDRRRVSVQ
                     WFAGTIMTALCGAALMGGAVFTSLDGETNFAALPERVEVALRGALGGAEKGAHKSDRL
                     PTAEEPTFARQVIRVSTINKVGNHEVVRVRPFVRIAGNLSLTVSDLSANIPPFNPQRL
                     LAESAPGNATANDGTAAEPDAEVAFVMRDMAPIMPRLKISLLTPNDEVIARVRAAAEW
                     SDKAANHLPVAANITGIKLAYAGDGTVDPYAGFEARIIPENITLLPKTATQTTGGNGL
                     NEKIIIAKKGDSVIGILRDLNTAGADLSAISRVLGPRSFEGGIREGQKLRILMAPVSG
                     GQRLQPVRVIIANDSGIDAVVALADTGKYVSVDVKNVETEVAEATEESDENDTSGVRL
                     YQSIYETALRNRIPRPIIEDLIRIYSYDVDFQRKVQPGDSFEVLYAGEDETPAADSRN
                     DVLFATLTVGGETKKFYRFQSPDDGLVDYYDETGKSAKKFLVRKPVLAGIMRSGFGLR
                     RHPILGYTKMHTGVDWAAPSGTPIYASGNGIVEKVGWESGYGKYIRVRHNNGYETAYG
                     HMTAYARGMDEGTRVRQGQVIGFVGSTGLSTGSHLHYEILVNGRFVDPMRIKLPRGRV
                     LEGALLASFDKERERLDGIMARKPARVASSGAAVR"
     gene            4497..>5002
                     /locus_tag="VIY07_14025"
     rRNA            4497..>5002
                     /locus_tag="VIY07_14025"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1053 a         1425 c         1539 g          985 t
ORIGIN      
        1 tgcttccaac ctgctcaagc cggcgctggc gcgaggcgaa ttgcactgca tcggtgcgac
       61 cacgctcgac gagtacaaga agcacgtcga aaaagacgct gctttggcgc gtcggtttca
      121 gccggtctat gtgtccgagc caagtgtcga agatacaatt tcgattcttc gcggcctcaa
      181 ggataaatac gaacagcatc acggggtgcg catcgcggat tcggcaatcg tcgctgccgc
      241 cacgctgtcg catcgctaca tcactgatcg tttcctgccc gacaaggcga tcgacctgat
      301 cgatgaggct gccgcaagac tgaagatgca ggtcgactcc aagcccgagg agctggattc
      361 gatcgaccgt gaaatcgtgc ggttgaagat cgaacaggag gcgctgaaga aagagtccga
      421 tcccggttcg aaggatcgtc tcaagcgtct cgaaaatgag ctgaaagagc tggaaaagcg
      481 ttcggccgat cttactggcc gctggaaatc ggaaaaagag aaactctcgg acgcgcagaa
      541 gctcaagacc gagctcgacc aattgcgcgc cgagctcgcc aacgcacaac gtcgtggtga
      601 atttcagcgc gccggcgaat tggcctatgg ccgcattccg gaactcgaga agaagttgag
      661 tgcgatcgaa gcctccgacg gcaaaggcgc gatggtagag gaaaccgtca ccgccgatca
      721 cgttgcacac gttgtttcgc gctggaccgg cgtgcccgtc gacaggatgc ttgagggcga
      781 aaaggaaaaa ctcctgcgca tggaagacga actggccaag cgcgtcatcg gccagcagga
      841 cgccgtgcgc gcggtctcga cggccgtgcg gcgcgcgcgc gccggtctgc aggatccgcg
      901 ccgaccaatc ggctcgttca tgttcctggg cccgaccggc gtcggcaaga ctgagctcac
      961 caaggcgctg gcggaatatc tgttcgacga cgagaacgcg ctgatccgca tcgacatgtc
     1021 ggaatacatg gagaaacacg cggtcgcgag gctgatcggc gcgccgccgg gatatgtcgg
     1081 ctatgaggaa ggcggtgcgc ttaccgaagc cgtgcggcgc aggccttatc aggtggtgct
     1141 gttcgacgag atcgagaagg cgcatccgga tgttttcaac gtccttttgc aggtgctcga
     1201 tgacggtcgt cttacggatg gccagggcca tacggtggat ttccgcaaca cgctgatcgt
     1261 gatgacgtcg aacctcggct ctgaatttct cgtcaatcag ccggaagggc aggataccga
     1321 cgcggtcaag gacgaggtca tggcggtggt ccgcgcggcc ttccggccgg aatttctcaa
     1381 ccgcgtggac gagatcatcc tgttccaccg cctcaagaag gcggacatgg ggaagatcgt
     1441 cgacatccag atcgcgagac ttcagaagct gctcgacgac cgcaagatcg tgctcaagct
     1501 cgatgccaag gcgcgcgatt ggctggccga gaagggttgg gaccccgctt acggtgcgag
     1561 gccgctcaag cgtgttattc agaaatcggt gcaggatccg cttgccgaaa tgatcctggc
     1621 tgggaacatc aaggacggcg agacggtcaa actatccgcc gacaagctgg gcctgacctt
     1681 caacggcaag ctcgcacaag ctgcgtaacg agaccaaatg tcatgcccgg cacgatggcc
     1741 gggcatgacg aatcccgagg attgctgaat acgattatcg aaccgccgcg ccgctcgatg
     1801 caacgcgcgc gggcttgcgg gccatgatgc cgtcgagccg ttcgcgctct ttgtcgaagc
     1861 tcgcgagcaa cgcgccttcc agcacgcggc cgcgcggcag cttgatccgc atcggatcga
     1921 cgaaccgccc gttgaccaga atttcgtaat gcaggtgcga gccggtggaa agcccggttg
     1981 atccgacaaa tccgatcacc tgaccttgtc ggacgcgcgt gccctcgtcc attccacgtg
     2041 cgtaggcagt catgtgccca tacgctgttt catagccgtt gttgtggcgg acccggatgt
     2101 attttccgta acccgattcc catccgactt tctcgacgat gccgttgcca gatgcgtaga
     2161 tcggcgtgcc gctcggtgcc gcccagtcaa cgccagtatg cattttggtg tagccgagga
     2221 tcggatggcg gcgcaggcca aatccggagc gcatgatgcc ggcgagcacc ggcttgcgaa
     2281 ccaggaattt cttcgcgctt ttgcccgtct cgtcatagta atcgaccagc ccgtcgtccg
     2341 gcgactggaa gcgataaaat ttctttgttt cgccgccgac agtcagagta gcaaacagca
     2401 cgtcgttgcg gctgtcggcg gccggcgttt catcttctcc cgcgtagagc acttcgaacg
     2461 agtcgccggg ctgcaccttc cgctgaaaat cgacatcgta ggagtagatg cggatcagat
     2521 cttcaatgat cggtcggggt atccggttgc gcagcgcggt ctcgtatatg ctttggtaca
     2581 agcgcacgcc cgaagtgtca ttctcgtcgc tctcttccgt ggcttcggcg acctcggtct
     2641 cgacattttt tacgtcaacg gacacgtatt ttccggtatc cgccagcgcc acgactgcat
     2701 cgattcccga gtcgttcgca attatgacgc ggaccggctg aaggcgctga ccgccggaaa
     2761 ctggcgccat caatatgcgc aatttctgcc cttccctgat gccgccctcg aaacttcgag
     2821 gcccgagcac tcgcgagata gcactgagat ccgcaccggc agtattgaga tcgcgaagaa
     2881 tgccgataac gctgtcgcct ttctttgcga taattatctt ttcattgaga ccatttccgc
     2941 ccgtcgtctg cgttgcggtc ttgggcaaca aggtaatgtt ttcagggata atacgcgctt
     3001 cgaagccggc atatggatcg acagtcccgt cgccggcata ggcgagttta attcccgtga
     3061 tgttggcggc tacagggaga tgattggcgg ccttgtcgct ccattcggca gccgctcgca
     3121 cgcgcgcgat gacttcatcg ttaggcgtca gcagcgaaat ttttagcctt ggcattatcg
     3181 gtgccatgtc gcgcatcacg aacgcaactt cggcatctgg ttctgccgcc gtgccgtcgt
     3241 ttgcggtggc gttgccgggc gcagattcgg caagcagtct ttgcgggttg aatgggggga
     3301 tattggccga gagatcggaa acggtgagtg acagatttcc ggcaatgcgc acgaaaggac
     3361 gcacacgcac gacttcgtgg ttgccgacct tgttgatggt ggagacgcga atgacctgcc
     3421 gcgcaaaagt tggctcttcg gcggtaggca ggcggtcgct cttgtgcgcg cctttttcgg
     3481 cgccgccaag cgcgccgcga agcgcgactt cgacacgttc aggcaaagcg gcaaaattgg
     3541 tttcaccgtc gagggatgtg aaaacggcgc cgcccatgag agcagcgccg caaagtgcgg
     3601 tcataatcgt gccggcaaac cattgcaccg aaacgcgtcg gcgatcgaca aacccgctcg
     3661 agccgccatc gaccgacatc ggtggttcgt tgccgagctc gatggcctcg gcctgccgtg
     3721 atcttggtgc gccgcgcgac cgtgtctggt ccaagctcgc cgtccccatg cgcctcggat
     3781 cgaaggtggc ttgccgcaac caaatagcct cagacgccgt cggcaggccc gcttgaatca
     3841 agttccggca cgatgccggt tggtccaggg cccgtcaacg cggcacccga acccattgct
     3901 gactggcctg attgacggtg gctgaaaagc cgccgttgcg attccgtccc tcgaaagaac
     3961 ctcaaggacg acgcaggaat atggcctgag tacggcgcgg catggattaa ggcattattt
     4021 atctattggg cgggcgaaaa tttccccgac cttcaatgtg agccagaaaa atgggccttt
     4081 ctggttgaca atgcgcgagg gcaacgccta tatacagccc atcggcgcgc cgtccgccta
     4141 cggtgcgatt gcgcgcctct gaagctcctc actggaacag tgaatcggcg tccgacagtt
     4201 ctcggatgca cgagcttcgc cggctctccg gctgaccggg gagtggggac cgccatggtt
     4261 cccgggctgt ttgaaaagtg aataggaaga aagagaaacg tggacggcgg agtccttgcg
     4321 ggccgctctc gcgtggagac gagagttttc attagagacg gcttcggaag agacatcggc
     4381 ggttcacgtt taaggtacat cgctgatcag caatgatcag tgggtggacc tcgtcaaagt
     4441 gacaacgttc caaacgttgt catgcgcaaa cgtgaccagc cggaatcaat ctcatccaac
     4501 ttgagagttt gatcctggct cagagcgaac gctggcggca ggcctaacac atgcaagtcg
     4561 agcggccgta gcaatacggc agcggcagac gggagagtaa cacgtgggaa cgcgcccttc
     4621 ggttcgggat aactcaggga aacttgggct aataccggat acgcccttac ggggaaagat
     4681 ttattgccga aggaacggcc cgcgtccgat tagcttgttg gtgaggtaac ggctcaccaa
     4741 ggcgacgatc ggtagctggt ctgagaggat gaccagcctc actgggactg agacacggcc
     4801 cagactccta cgggaggcag cagtggggaa tattggacaa tgggcgcaag cctgatccag
     4861 ccatgccgcg tgggtgatga aggccctagg gttgtaaagc cctttcagcg gggaagataa
     4921 tgacggtacc cgcagaagaa gccccggcta acttcgtgcc agcagccgcg gtaatacgaa
     4981 gggggctagc gttgctcgga at
//
LOCUS       DATDHO010000726         1558 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_134680, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000726 DATDHO010000000
VERSION     DATDHO010000726.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_134680"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..910
                     /locus_tag="VIY07_14030"
     CDS             <1..910
                     /locus_tag="VIY07_14030"
                     /inference="COORDINATES: protein motif:HMM:NF012356.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-amylase family glycosyl hydrolase"
                     /protein_id="HEY6382910.1"
                     /translation="RELLATYTADLPEVQEIVAKFRSVVEEYDDRMVVGEIYLPVERL
                     MAYYGASGKGAHLPFNFQLLQLPWNARKIKAAVERYEALLPSYAWPNWVLGNHDKSRI
                     VTRVGPAQARVAAMLLLTSRGTPTMYYGDEIGMHDVPIPADQVQDPFEKNVPDLGLGR
                     DPERTPMQWSGDENAGFTKGNPWLPIAQDYLTVNVASERGSANSMLTLYQRLIELRRA
                     EPALSVGEFAPLPASDDLMAYVRKWNERRLLIVLNFSATAQSFSIVDLQCRGSLLLTT
                     YLDRCREELADKLDLRADEGAIIELR"
     gene            complement(951..>1558)
                     /locus_tag="VIY07_14035"
     CDS             complement(951..>1558)
                     /locus_tag="VIY07_14035"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382911.1"
                     /translation="GLTRLGSNSHYFVIQALRKHGMEPTDVSFIQTGGQVENLAALLT
                     GAVDAATMTGPSGGARANSQGFRYVVYGPDLHVPFAAATLVTRRSSIRARGPVIEKFV
                     RVMAEAVKIMFTDKELTYKVLGKQLRINDRKVLDAAYDEEIKVMEPRLEFKTEAFQAI
                     LDETAKVDPRAKKIRPQELMDRRYLEGLEKSGFFDKLWAAK"
BASE COUNT          316 a          455 c          451 g          336 t
ORIGIN      
        1 tcgcgaattg ctcgccacct acacggccga tcttcccgag gtgcaagaaa tcgtcgcaaa
       61 atttcgcagc gtcgtcgaag agtacgatga tcgcatggta gtgggcgaaa tttatctgcc
      121 ggtggaacgg ctgatggcct actatggcgc cagcggcaag ggcgcgcacc tgccgtttaa
      181 ctttcaactg ctccaactgc cgtggaacgc cagaaagatc aaggccgcag tggaacgcta
      241 tgaagcgctg ctgccgtcct atgcgtggcc gaactgggtg ctcggtaacc acgacaaatc
      301 ccgcatcgtc acccgcgtcg gtccggcgca ggcgcgcgtg gcggccatgc tgctgctcac
      361 gtcgcgcggc acgccgacga tgtattacgg cgatgaaatc ggtatgcatg acgtgccgat
      421 cccagcggac caagtacagg acccgttcga gaagaatgtc cctgatctgg gcctgggccg
      481 cgatccggag agaacaccga tgcaatggag cggcgatgag aacgccggtt tcaccaaggg
      541 taacccatgg ctgccgattg cccaagatta cctaactgtc aatgttgctt cggagcgcgg
      601 cagcgccaat tcaatgctga ctctttacca gcgtttgatc gagctgcgcc gcgcagagcc
      661 ggccttatcg gtaggagagt ttgcgccgtt accagcgagc gatgatctga tggcttacgt
      721 gcgcaaatgg aatgagcgta ggcttctgat cgtgctcaac ttcagtgcca cagcgcaaag
      781 cttcagcatc gttgacttgc agtgccgcgg ctccctcctg ctcaccacct acctcgaccg
      841 ctgtcgggaa gagctggcgg acaagctcga cctgcgcgcc gatgagggcg ccatcatcga
      901 gctgcggtga tgtttgtgcg ggttcggctg gggatccgag tgaccagtgg tcattttgcc
      961 gcccacagtt tgtcaaagaa accgcttttc tcgagccctt caagatagcg ccggtccatc
     1021 agttcttgcg gtctgatttt cttagcccgg ggatcgacct ttgccgtttc atcgaggatc
     1081 gcttgaaagg cttccgtctt gaattccagc ctgggctcca tgaccttgat ctcttcgtcg
     1141 taggcggcgt ccagcacttt tcggtcgttt atgcgcaact gttttccaag aaccttgtaa
     1201 gtcaattcct tatccgtgaa catgatcttc accgcctcag ccataacgcg cacgaacttt
     1261 tcgatgactg gtccgcgcgc gcggatcgag gagcggcggg tcaccaaggt cgccgccgca
     1321 aacgggacgt gaaggtctgg gccataaacg acgtagcgaa atccttggga attcgctcgc
     1381 gcccctccag atggtccggt catcgtggcg gcgtccacgg cgccggtcag caaagccgcg
     1441 agattttcca cttggccgcc agtctggatg aaactaacgt cagtgggttc catgccatgc
     1501 tttctcaaag cctgaatgac gaagtaatgc gagttgctgc cgagtcgagt caaaccca
//
LOCUS       DATDHO010000727         1541 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_431921, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000727 DATDHO010000000
VERSION     DATDHO010000727.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1541
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_431921"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1290)
                     /locus_tag="VIY07_14040"
     CDS             complement(<1..1290)
                     /locus_tag="VIY07_14040"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6382912.1"
                     /translation="MSFLQLVRREMHGSLPKLLLMSGLGGISTAAILGAINAGLQSGP
                     TLWASTLFIIALFLFIKTQYYVTITTTAEIEAIIHKIRVRLMDQIRRSELLSIEGIGR
                     ASIVAAITSDTALLTQASNMLCFTVQGAVLIFFVAIYVAFLSLAAIITTIVIVSVAAA
                     IFHMKNRQLVVEKQRAAEWERRLFDRLTDFLDGFKEVRLNAARSAALYDDAMDVSRTA
                     ANIKIKSQAETFKMIVTSQISMYVLLGAVVFIAPQFSESLGGAALTKTTTALMFIVGA
                     CFGLVQSIPILLSANAAADRIEQLERAMRATVSSIEPREIPALKRFRKIEMRRIMFRY
                     VDRFSETAFQIGPMDFELEPGELVFITGGNGSGKSTFLRVLSGLYPPDSGEIILDGRL
                     INDLTRDEYRSLIAGIFFDYHLFKRLYGVPEPNRGEVE"
BASE COUNT          358 a          439 c          447 g          297 t
ORIGIN      
        1 ctcaacctcc ccccgatttg gctcgggtac tccgtaaagc cgcttgaaca agtgatagtc
       61 gaagaagatg ccggctatca gcgaacgata ctcatcgcgc gtgaggtcgt tgatcagccg
      121 gccatcgagg atgatttcac cggaatcggg cggatagagc ccggacagca cccgcaagaa
      181 tgtcgatttt cccgagccgt tgccgccggt gatgaagacc agctccccgg gctccagttc
      241 aaagtccatc ggaccgatct ggaatgcggt ctcggaaaat ctgtcgacat agcgaaacat
      301 gatcctgcgc atctcgatct tgcggaagcg cttgagcgca ggaatctcac gcggctctat
      361 cgaagaaacg gttgctcgca tcgccctttc caactgctcg atgcggtccg ccgcggcatt
      421 cgcgctcagc aagatgggta tcgattgcac gaggccgaag cacgctccca cgatgaacat
      481 gagggctgtc gtggtctttg tcagtgcggc accgcccagc gactcgctga actgaggagc
      541 aataaagaca acagcgccga gcaagacata catcgagatc tgcgacgtca cgatcatctt
      601 gaacgtctcg gcctggctct tgatctttat gttggcggcc gttcgcgata cgtccatcgc
      661 atcgtcgtac aaggcggcgc tgcgtgccgc attgagtctg acctccttaa atccatccag
      721 gaaatcggtc aggcggtcga acagccggcg ctcccattcc gccgccctct gtttttcgac
      781 aaccagctga cgatttttca tatggaaaat cgccgctgcc accgacacga tgacgattgt
      841 cgtgatgatc gcagcgagag agaggaacgc gacgtagatc gccacgaaaa agatcaggac
      901 tgcgccctgc accgtgaagc agagcatgtt gctggcctgc gtaaggagcg ccgtatcgct
      961 ggtgatcgcg gcaacgatgc ttgcccgtcc gattccctcg atcgagagga gttccgagcg
     1021 cctgatctga tccatcaggc gcacgcgtat cttatggatg attgcttcga tctcggcggt
     1081 cgtcgttatg gtgacgtagt attgggtctt gatgaacagg aacagcgcaa tgatgaaaag
     1141 cgtggaagcc cacaaggtcg gaccgctctg cagcccggcg ttgatcgcgc cgaggatcgc
     1201 ggcggtgctg atgcctccaa gcccggacat gagcagcagc ttcggcagcg agccgtgcat
     1261 ttcgcggcga acgagctgga ggaaggacat aagtgcgatg tcttccgttt acacaactac
     1321 gaaatgctgc cgtcggcgca gcgccatgca tccgcgccga acccgacaca cgacttcggt
     1381 caattccggc ggtgccattc ggcgcggcgc gatggcccag taagcagcaa aatgggcaag
     1441 actacaaatg gagtggtaag aagggccaga agaaaagtac cgaaaaaacc cagacggcgg
     1501 tcgataccgc aaagtccggt gagagcacag aatactatat a
//
LOCUS       DATDHO010000728         3393 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_184602, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000728 DATDHO010000000
VERSION     DATDHO010000728.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3393)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3393)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3393
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184602"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VIY07_14045"
     CDS             <1..344
                     /locus_tag="VIY07_14045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382913.1"
                     /translation="AHVIDFGMPDKELASPENERRVVSFRPGKAPARSRDPTPVESLA
                     KYEQTEDPDDSDDYRHRMLVNAAVFVLVIGLIGAALWLADTMAAMRKNQDCVLSGRRG
                     CTPVEVSKDRW"
     gene            557..838
                     /locus_tag="VIY07_14050"
     CDS             557..838
                     /locus_tag="VIY07_14050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEY6382914.1"
                     /translation="MSSTFDTIANIIAETCDIPRDTIKPESHAINDLGIDSLDFLDIA
                     FAIDKAFGIKLPLEQWTQEVNDGKATTDQYFVLKNLSARIDELVAAKGA"
     gene            850..1323
                     /locus_tag="VIY07_14055"
     CDS             850..1323
                     /locus_tag="VIY07_14055"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ family
                     protein"
                     /protein_id="HEY6382915.1"
                     /translation="MRLEYFQLIDHIVELNVADRTISTEATVPTTNTIFEGHFPGFPL
                     MPGVLLIEAMAQTSGWLVVATHRFNRMAFLAAVKDAKFRMFVRPGQKLSVTAALVHDG
                     SGYAITDAGIALDGKPICDATLTLRVLDFPNDEMRIRMREAAARVGFPTEVAADG"
     gene            1316..2512
                     /locus_tag="VIY07_14060"
     CDS             1316..2512
                     /locus_tag="VIY07_14060"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HEY6382916.1"
                     /translation="MADSTREVWITGIGIVSCLGEGPDAHWQKLMQAHPDADTTTFAP
                     FVVHPVAPINFDAQIPKKGDQRQMENWQRIGTYAAGLALDSAGVKGNSALLSRMDMIV
                     AAGGGERDLTVDSNILSGIRRAANPAAFLNERLMSDLRPTLFLAQLSNLWAGNISIVH
                     GVTGSSRTFMGEESAGIDAVRIAHSRIGARQSDIALVGGSFNGERPDLLMLYEFAELA
                     LKHKYAAVWERGNATAGFALGSLGAFLVIEARDHAEKRGAKPLAKLTTVVSDRATRQP
                     GTITETLSRLWDRLKAKIVAGHAAVLSGATGVKPATAEERKFLELHPDLAVRATGSYL
                     GHGLEPQFAMNIALATAALGHGSLFPPCDATGLERPMAADLTQVVVTGVGHWRGEGLA
                     LIERIG"
     gene            2526..>3393
                     /locus_tag="VIY07_14065"
     CDS             2526..>3393
                     /locus_tag="VIY07_14065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEY6382917.1"
                     /translation="MATGKDKSGRMRVVVTGLGVVTSLGAGKTENWAKLTAGESGIKT
                     ITRFPTDGLKTRIAGTIDYLPPQSSNAALTEAFAELAAEEAIAQSDLTRSGQFPGPLF
                     LAVPPIEMEWPQRLEFGAKSGANDKVTYADMLRVSAGFPAYHRRFLLGSVADNLAEKF
                     GTQGSPISLSTACASGATAIQLGVEAIRRGETDAALCIGTDGSINAESVIRFSLLSAL
                     STSNDPPHTAAKPFSKNRDGFVMAEGAGALVLESYEAAKARGAKILGVVEGCGEMTDA
                     FHRTRSSPDGKPI"
BASE COUNT          698 a          990 c         1024 g          681 t
ORIGIN      
        1 tcgcccacgt gatagacttt ggcatgccag acaaggaact tgcttcgccc gaaaacgagc
       61 gccgcgtcgt gagcttcagg cccggcaagg cgcccgcgcg ttcgcgcgac cccacgccgg
      121 tcgagagtct ggcaaaatac gagcaaaccg aggatccgga cgattccgac gactatcgtc
      181 atcgcatgct ggtgaacgcg gcagtgtttg tcctggtcat tgggctgatc ggcgcggcgc
      241 tttggttggc ggataccatg gctgcgatgc gaaaaaatca ggactgcgtc ctgtcgggcc
      301 gtcgtgggtg cacgccggta gaagtgagca aggaccgctg gtgagctctg tcaggagggt
      361 gttcccgaag gcctgaaaaa ccgcccttaa gcgcatgtcc tgcaggtgac cgccgccatt
      421 gaacttgtcc ctgtgcttcg gtatacgggc atccaaatca ccagccggcg ggagtgcgga
      481 ttgggggact gtcgcgcgcg ttcaggcgca taggtcgcct gcttgccaga actccaaatc
      541 aaccagagag ttacctatgt cttcgacgtt cgacacgatc gccaatatta tcgccgaaac
      601 ctgcgacatt ccgcgcgaca ccatcaagcc ggaaagccac gcaatcaacg atcttggcat
      661 cgacagcctc gattttcttg atatcgcctt tgcaatcgac aaggccttcg ggatcaagct
      721 tccgctcgaa cagtggaccc aggaggtcaa cgacggtaaa gcaacgaccg accagtattt
      781 cgtgctcaag aacctgagcg cgcgcatcga cgagctcgtc gctgccaagg gggcataagc
      841 gcggagccca tgcgtcttga gtacttccag ctgatcgacc acatcgtcga gctcaatgtc
      901 gccgatcgca ccatcagcac cgaagccacc gttcccacca ccaatacaat cttcgaaggt
      961 cacttccccg gttttccgct gatgccgggc gtgctgctga tcgaggcgat ggctcagacg
     1021 tcaggttggc tggtcgtcgc gacgcatcga ttcaatcgca tggcctttct tgccgcggtc
     1081 aaggacgcga agttccggat gttcgtcagg ccgggacaaa agttgtcggt gacggcagct
     1141 ctcgtccatg acggttccgg ttatgcgatt accgatgcgg gcatagccct cgacggcaaa
     1201 cccatctgcg acgcgacgtt aacactccgg gtcctcgatt ttccgaacga tgaaatgagg
     1261 atccggatgc gggaagccgc tgcccgcgtc ggcttcccga ccgaggtggc agccgatggc
     1321 tgacagcacc cgggaagtct ggatcaccgg gattggtatc gtttcgtgtc tcggtgaagg
     1381 ccccgatgcg cattggcaaa agctgatgca agcgcatccc gacgccgata caacgacctt
     1441 tgcacccttt gttgtgcatc cggtagcacc gatcaatttc gacgcccaaa tcccaaaaaa
     1501 gggcgaccag cgccaaatgg aaaactggca gcggatcggg acctacgctg cggggcttgc
     1561 gctggattcg gcgggtgtca aaggcaacag cgccctcctc tcgcgtatgg atatgatcgt
     1621 tgcggccggc ggcggcgaac gcgatctgac cgtcgactcg aatattctca gcggcatcag
     1681 gcgtgctgcc aatccggcag cttttctaaa tgaacgcttg atgagtgatc tgcgcccgac
     1741 gctttttctt gcccagcttt ccaatttgtg ggcgggcaat atctcgatcg tgcacggcgt
     1801 gactgggtct tcgcgcactt tcatgggcga ggaatctgcg ggaatcgatg cggtgcggat
     1861 tgcccattca cgcattggcg caaggcaaag cgacatcgcg ctggtgggtg gctccttcaa
     1921 tggcgagcgg ccggacctgc tgatgttata cgagttcgcc gaactcgcac ttaagcacaa
     1981 atatgcagcg gtttgggagc gtggaaatgc aacagccggt ttcgcattgg gctctctcgg
     2041 cgcttttctc gtgatagaag ctcgcgacca tgcggaaaag cgaggagcca aacctttggc
     2101 aaagctgacg accgtggttt ctgatcgagc cacccggcag cctggaacga ttacggaaac
     2161 gctttcgcga ttatgggacc gactgaaagc aaaaatagtt gctggacatg ccgcagtcct
     2221 gtcgggagcg acaggcgtca agcctgcgac ggccgaggag cgtaagtttc ttgaactgca
     2281 tcctgatctt gccgtgcgtg cgaccggatc ttatctcggt cacgggctgg agccgcaatt
     2341 cgctatgaac attgcactgg ctaccgctgc gcttggtcat ggtagtctct ttcctccatg
     2401 tgacgcgacc ggcttggaac ggccaatggc agcggacttg acccaagtgg tagtaacagg
     2461 cgtcggacat tggcggggtg aaggtcttgc actcatcgaa cgcattggtt gagggagcgc
     2521 gaaagatggc gacgggcaag gataaatcgg gccggatgcg agttgtcgtg actggcctgg
     2581 gcgtggtcac ctcgttggga gccggaaaaa ccgaaaactg ggcaaaactc acggccggtg
     2641 aatcgggcat caagaccatc acccgcttcc ccacggatgg gctaaaaaca cgcatagcag
     2701 gcacgatcga ctatctcccg ccacagtcct ccaatgctgc gctgacggaa gcattcgccg
     2761 agctcgccgc cgaggaggct atcgcacaat cggacctgac tcgctccggc caattccctg
     2821 gcccgctctt cctcgccgtg cccccgatcg agatggaatg gccgcagcgg cttgaattcg
     2881 gcgccaagtc cggcgcgaac gataaggtca cgtatgcgga tatgttgcgc gtgagcgccg
     2941 ggtttcccgc ctaccaccga cgattcctgc tgggctcggt cgccgacaat ctcgcggaaa
     3001 agttcggcac gcagggttcc ccgatttcgc tgtccacggc ctgcgcgtcc ggagcaactg
     3061 cgattcagct cggcgtggaa gcaatccggc gtggcgaaac cgacgcggcg ctttgcattg
     3121 gaactgacgg ttcgatcaat gccgaatcgg taattcgttt ttcattgctt tcggcgctgt
     3181 cgaccagcaa cgaccctccc cataccgcgg ccaagccgtt ctccaagaac cgtgacggtt
     3241 tcgtgatggc cgaaggtgcg ggcgcgctcg tactggaaag ctacgaggcg gccaaggcgc
     3301 gcggtgcaaa gattctgggt gtggtcgagg gttgtggcga gatgacggat gcctttcatc
     3361 gtacccgttc tagcccggac ggcaagccga tca
//
LOCUS       DATDHO010000729         1792 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_184868, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000729 DATDHO010000000
VERSION     DATDHO010000729.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1792
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_184868"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            60..389
                     /locus_tag="VIY07_14070"
     CDS             60..389
                     /locus_tag="VIY07_14070"
                     /inference="COORDINATES: protein motif:HMM:NF015909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382918.1"
                     /translation="MHVSNKEQKKRFLERIEEPEKNWKFSVNDAKERGHWDDYMEAYE
                     DMIQNTATKEAPWYVVPADNKWFTRVVVAAAVIDALADLDLHYPKVSEEKLKELAAAK
                     RALNAGR"
     gene            376..>1792
                     /locus_tag="VIY07_14075"
     CDS             376..>1792
                     /locus_tag="VIY07_14075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEY6382919.1"
                     /translation="MLADDRYPGHLDVIAGLTAAAVVLPKAMAYATVAGLPVEVGLYT
                     AFLPMVIYALLGSSRVLSVSSTTTLAILAGTQLGLAVPDGDSAKLVTATATLTILVGA
                     MLLLARLLRLGFAANFISAPVLTGFKAGIGLVIVLDQMPKLLGIHIVKQGFFRDLLSV
                     AHHVPEASLLTFAIAAATILVLVGMERLLPHSPAPLVAIGGGIAAAWLLELKPRGVST
                     VGLIPQGLPSLTMPDLALIEQMVPGALGMALMSFTETIAAGRAFARPDDPPINANREL
                     IATGVANIGGALFGAMPAGGGTSQTAVVRAAGGRSQKASLVTAGTTLATMLLLAPLLG
                     LLPNATLAAVVIVYSVGLIQPLEFLAIRKVRRMEFRWAIIAALGVLIFGTLKGIVVAI
                     IVSLIGLASQTAYPRVSVIGRKRGADVLRPLSHEYPDDETFEGLLIVRPEGRLFFVNA
                     QYVAEQIGALVKQHKPRVVAVD"
BASE COUNT          320 a          530 c          564 g          378 t
ORIGIN      
        1 tattcgcagc ttcgagcgct atctgacacg caacggcgtc gtcattcgca agtttttttt
       61 tgcatgtctc gaacaaagaa caaaagaaac ggttcctgga gcgcatcgag gagccagaga
      121 aaaattggaa gttttcagtg aatgacgcca aggagcgcgg gcattgggat gattatatgg
      181 aagcctacga ggatatgatt cagaacactg ccaccaagga ggcgccatgg tacgtcgtgc
      241 ccgccgacaa caaatggttc acgcgagtcg ttgttgccgc cgcggtcatc gatgcgctag
      301 ccgatctgga cttacattat cccaaggtga gcgaagaaaa gctcaaggag ctggcggccg
      361 cgaaaagggc tttgaatgct ggcagatgat cgttatcccg gtcatctcga cgtgatcgcc
      421 ggcctaacgg ccgcggcagt cgttcttccg aaggcgatgg cctatgcgac ggttgccggc
      481 ttgcccgttg aggtcggcct ctataccgcg ttccttccca tggtgatcta cgcgctactc
      541 ggctcgtcgc gggtgctaag cgtgagctcc accaccacgc tcgccatcct agccggcacg
      601 cagctcggtc tggccgtgcc ggatggtgac agtgcaaagc tcgtcacggc gacagctacg
      661 ctgactattt tggtcggcgc gatgctgctt ttggcgagac tgctgcgtct aggattcgcc
      721 gccaacttca tttctgcgcc ggtactgacg ggcttcaaag caggcattgg cctagtgatc
      781 gtgctggacc agatgccgaa gctcctggga atccacatcg tgaaacaagg cttcttccgc
      841 gacctcctaa gtgtagcgca tcatgtcccc gaggcctcgc tattgacgtt tgcgatcgcc
      901 gccgcgacga tactcgtgct ggtcggaatg gagcgactct tgccgcattc tccggcgccg
      961 ctggtcgcca tcggcggtgg catcgccgcg gcttggctct tagagctgaa gccacgggga
     1021 gtgtcgacgg tcggcctaat cccgcagggc cttccctcgc taacgatgcc ggatcttgcg
     1081 ctgatcgaac aaatggtgcc gggcgcgctc ggaatggcgc tgatgagctt cacggaaacg
     1141 attgctgcgg gtcgtgcgtt cgcccgtcct gacgatccgc ccatcaatgc caatcgcgag
     1201 ctgatcgcga ccggcgtagc caatatcggc ggcgcgctat tcggtgcgat gccggccggc
     1261 ggcggcacct cacagaccgc ggttgtccgc gctgcgggag gtcggtccca gaaggcttcg
     1321 ctggtcactg cgggcaccac gctggcgacg atgctgttgc tcgcgccgtt gctgggcttg
     1381 ctgcctaatg ctacgctggc ggcggtcgtc atcgtctact cggtcggtct gatccaaccg
     1441 ctggaattcc ttgccattcg caaagtgcgc aggatggaat ttcgctgggc gatcatcgct
     1501 gcgctcggtg tgctgatctt cggcaccctg aagggcattg tggtggcgat tatcgtgtcg
     1561 ctgatcggcc tggccagcca gaccgcctat ccgcgcgtgt ccgttatcgg ccgcaagcgc
     1621 ggagccgacg tgctgcgacc actgtcgcac gagtacccgg acgacgagac cttcgagggc
     1681 ctgctgatcg tgcggcccga ggggcgcctt tttttcgtca acgcgcagta tgtggcggag
     1741 cagattggcg cactggtcaa gcagcacaag ccgcgcgtgg tggcggtgga ca
//
LOCUS       DATDHO010000730         2464 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_81078, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000730 DATDHO010000000
VERSION     DATDHO010000730.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2464)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2464)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2464
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81078"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..673
                     /locus_tag="VIY07_14080"
     CDS             <1..673
                     /locus_tag="VIY07_14080"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GNAT family N-acyltransferase"
                     /protein_id="HEY6382920.1"
                     /translation="LFARRDIDGYDAICDHLLVIDHAARDRSGLNKPVVVGTYRLLRQ
                     PLAEEYGGFYTAGEFDIGSLIARHSHLQFLELGRSCVLAPYRNKRTVELLWHGIHAYF
                     LQNRCDVMFGCASLDGTDPNRLTLLLSFLHHYAAAPEPWRARALPERYVEMNRTAKET
                     IDAKDALRALPPLIKGYLRLGAYIGDGAVVDYEFGTTDVLIVLPVSAIKRRYFEHFDL
                     SRRAA"
     gene            complement(695..1648)
                     /gene="coaA"
                     /locus_tag="VIY07_14085"
     CDS             complement(695..1648)
                     /gene="coaA"
                     /locus_tag="VIY07_14085"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HEY6382921.1"
                     /translation="MEQRTEENLSPYRNFTRAEWAMLREDTPMTLGSEEVTRLRSLHD
                     RLDMAEVEEIYLPLSRLLSMYVAATQRLFRAQQRFLGTEDVKMPYIIGVAGSVAVGKS
                     TTARVLQALLARWPNVPKVDLITTDGFLYPNAVLEREGLMEKKGFPESYDLPALLRFL
                     SDVKAGRRPARAPIYSHLFYDVMPNQSIEVDRPDILIVEGLNVLQTGRLPKDGKAIPF
                     VSDFFDFSVYLDANEEVLKAWYVDRFLTLRGTSFRDPKSYFHRYSSLSDQEAIETASS
                     IWSRINLVNLHENILPTRQRADLILKKDESHLVENVSLRKL"
     gene            complement(1656..1979)
                     /locus_tag="VIY07_14090"
     CDS             complement(1656..1979)
                     /locus_tag="VIY07_14090"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012173016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEY6382922.1"
                     /translation="MSKFTLSDLETLIHERAKASPAESYTRTLIDKGVAHCAKKLGEE
                     AIETGLAAVQEDKERLIAEAADLLYHLLVLLEARGVSLSQVEAALEKRTARSGHEEKA
                     SRPRS"
     gene            complement(2016..>2464)
                     /locus_tag="VIY07_14095"
     CDS             complement(2016..>2464)
                     /locus_tag="VIY07_14095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HisA/HisF-related TIM barrel protein"
                     /protein_id="HEY6382923.1"
                     /translation="GFVKEAAEKFGDQCIVVAIDAKKISGPGEKDRWEIFTHGGRNPT
                     GLDAIDYAREVVALGAGEILLTSMDRDGTRLGYDLPLTRAIADSVTVPVIASGGVGSL
                     EHMVEGIRDGHATAVLAASIFHFGEHSVREAKAYMAKAGLPMRLDP"
BASE COUNT          499 a          751 c          677 g          537 t
ORIGIN      
        1 attgttcgcg cgccgggata tcgatggcta tgacgcaatc tgcgaccact tgctggttat
       61 cgaccacgct gcacgcgacc gaagcgggct caacaagcct gttgtcgtcg gtacataccg
      121 gctgctccgc cagcccctgg ccgaagaata cggaggcttt tacacggcgg gagaattcga
      181 tatcggatca ctgatcgcgc gccacagcca tcttcaattt ctcgaactgg gccgctcctg
      241 cgtgcttgcc ccttaccgca acaaacggac agtcgaactc ctgtggcacg gcatccatgc
      301 ctacttcctg cagaaccgct gcgacgtgat gttcgggtgc gcaagccttg acgggaccga
      361 ccccaatcgc ctcacactgc ttctttcgtt cttgcatcat tatgcggcag cgccggaacc
      421 atggcgcgct cgagctttgc ccgagcgcta tgtcgaaatg aatcgcacgg cgaaggaaac
      481 catcgatgcc aaagatgcct tgcgggcact accgccgctg attaaggggt atctacgcct
      541 cggtgcatat atcggtgatg gcgctgtcgt tgactacgag ttcggcacca cggacgtgct
      601 gatcgtactt ccggtgtcgg ccatcaagag acgctatttc gagcatttcg atctcagccg
      661 ccgcgcggcc taaggcctgc gttgctggcc cgacttataa tttccgcaac gagacattct
      721 cgaccaggtg gctttcatct ttcttcagga tgaggtcggc ccgttgccgc gtcggcagaa
      781 tattttcgtg caggttgacc aggttgatgc gagaccagat cgacgatgcg gtttcgatcg
      841 cctcctgatc ggacaagctc gaataacggt gaaagtacga ttttggatca cggaaagagg
      901 ttccgcgcaa agtcaggaag cgatccacgt accaggcctt aagcacctcc tcattggcgt
      961 cgagatagac cgagaagtcg aagaaatccg agacgaaagg aatcgccttg ccatccttcg
     1021 gcaagcgacc ggtttgcagc acgttcaacc cttcgacgat gagtatgtcc ggcctatcga
     1081 cctcgatcga ttggttcggc atgacgtcgt agaacaagtg ggagtagatc ggtgctcttg
     1141 ccggacgccg accagccttg acgtcggaaa ggaagcgcag cagcgccggc agatcatagc
     1201 tctccgggaa gcccttcttt tccatcaggc cttcgcgttc gagaacggcg ttcggataaa
     1261 gaaacccatc ggtcgtgatc aggtcgacct tgggcacatt cggccagcgt gccaacaagg
     1321 cttgcaggac gcgcgccgtg gtcgacttgc caaccgcgac agagcctgca acgccgatga
     1381 tgtacggcat cttgacatcc tcggttccga ggaagcgctg ctgtgcccgg aaaagccgct
     1441 gcgtcgctgc cacatacatt gagagcaatc gagacagcgg caaatagatc tcctcaacct
     1501 ccgccatatc cagtcgatcg tgcagcgaac gaagacgcgt gacctcttcc gagcccaggg
     1561 tcatgggagt gtcttctcgc aacattgccc actccgcgcg cgtaaaattg cggtagggcg
     1621 acagattttc ttcggtacgt tgttccatca ttcgactagc tgcgcgggcg tgacgccttt
     1681 tcctcgtgcc cgcttcttgc cgtgcgtttc tccagcgccg cctcgacctg cgataaggag
     1741 acgcctcgcg cttcaagcag cacgagcaga tgataaagca gatcggctgc ttccgcgatc
     1801 agccgttctt tgtcctcctg gacagcggca agaccggttt cgattgcctc ttctccaagc
     1861 ttcttggcgc agtgcgccac acctttgtcg atcaaggtcc gggtatagga ctctgccggg
     1921 ctggctttcg cccgctcgtg aatcagcgtt tccagatcgg acagcgtaaa cttgctcatg
     1981 atggcccctt ttggcggctc atagcattgt tgcgatcagg gatcgagccg catcggcagg
     2041 ccagctttgg ccatataggc cttggcctcg cgcacgctgt gctcgccgaa gtgaaaaatg
     2101 gaggctgcca gcactgcggt tgcatggccg tcgcgaatgc cctcgaccat gtgctcaaga
     2161 ctgcccacgc cgcccgaggc aatgaccggc accgtcacgc tatccgctat cgcgcgcgtc
     2221 agcggcaggt cgtagccaag ccttgtgccg tcgcgatcca tggaggtcag aagaatttct
     2281 cccgctccca gcgcaacgac ttcccttgcg taatcaattg cgtcgaggcc ggtcggatta
     2341 cgtccgccat gagtgaaaat ttcccaacgg tccttttcgc caggtccaga aattttcttg
     2401 gcatcaattg ccaccacgat gcattgatcg ccgaatttct ccgctgcctc cttcacgaat
     2461 ccac
//
LOCUS       DATDHO010000731         6273 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_477408, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000731 DATDHO010000000
VERSION     DATDHO010000731.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6273
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_477408"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            448..2106
                     /gene="ccoN"
                     /locus_tag="VIY07_14100"
     CDS             448..2106
                     /gene="ccoN"
                     /locus_tag="VIY07_14100"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEY6382924.1"
                     /translation="MIGQLTKNERQIALIILLALAVCGLAMAVAGRDDPLGAHGALVI
                     LAALAGIFFVIAGYYLPEPTEERRYHYYDDPTKAGIILAMVWAVFGLFVGDWGAWLFV
                     YPEFNFDAGWSSFGRIRPVHTTAVIFGFGGNALIATSLYVLQRTSRARLPDQLSPWFV
                     LLGYNLFCVVSVTGYMMGITQSKEYAEPEWYADIWLVIVWVTYFIIYLRTLARRKEPH
                     IYVANWYYMAFILVVAVLHIVNNLAIPVSLGHTKSYSSFSGVQDAMTQWWYGHNAVAF
                     FLTAGFLGMMYYYLPKRADRPIFSYRMSIISFWGITFLYMWAGSHHLHYTALPHWVQT
                     LGMTFSVMLLVPSWASAVNALLTLNGAWDKVRDDATLRFMMVAAVFYGLSTFEGSFLA
                     VRPVNSLSHYTDWTVGHVHAGALGWVALITFGAIYASVPWLWKREGMYSARLVEVHFW
                     FAVAGTIIYVFAMWNSGIIQGLMWRTYNESGTLAFSFVDSLVAMRPYYIARAIGGLFF
                     LIGAVVGCYNIWMTIRTASRKPSEAIAERPDPVIAGAPVLQPGE"
     gene            2112..2843
                     /gene="ccoO"
                     /locus_tag="VIY07_14105"
     CDS             2112..2843
                     /gene="ccoO"
                     /locus_tag="VIY07_14105"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEY6382925.1"
                     /translation="MFGLHYRLERKAIGLVLAIIGVTSIGGIIEIVPLFTIRQTVEDV
                     PDMRVYTPLELAGRNIYIREGCYACHSQMIRTLRDEVERYGPYSLAIESKYDHPMLWG
                     SKRTGPDLARIGGKYSDEWHVAHLNNPREVVWQSIMPAYRWLSRTALRSDDLGLHLKA
                     LRAVGVPYTDEMIANAQSDAYGQAAPDTPFAEGVVKRYGRATNVRAFDGVPDVLTEMD
                     ALVAYLQILGRLTDAAHKPVAAIGR"
     gene            2846..3016
                     /locus_tag="VIY07_14110"
     CDS             2846..3016
                     /locus_tag="VIY07_14110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit 3"
                     /protein_id="HEY6382926.1"
                     /translation="MEIDHGTLVWFSKSFGLFYLIGLFLIVVVYAFWPSNKKQFDDAA
                     KSILRDEDVPWR"
     gene            3007..3888
                     /gene="ccoP"
                     /locus_tag="VIY07_14115"
     CDS             3007..3888
                     /gene="ccoP"
                     /locus_tag="VIY07_14115"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEY6382927.1"
                     /translation="MAVEERDPHTGYTTTGHEWNGIKELNTPVPRIVYFFLIVTALFS
                     VVYWVLMPAWPLGLTYTKGLLGIDQRTTVTESLKQAALEREAWTRQIETESYQAIQND
                     PKLMTIVRQTGRTLFGDNCAPCHGFDAKGGKGFPNLTTTSWLWGGDPETIAETIRVGI
                     NSAHPKTRAGQMLAFGRDRILQPADVDNVVDYVQSLSDPDVSKQIPPAKLEAGKATFA
                     STCASCHGDDGKGKTEFGAPDLTDKVWIYGGDAQSILMSVRNGRQGHMPTWENRLSAV
                     DRKILALYIFDLRSPGR"
     gene            3885..4097
                     /locus_tag="VIY07_14120"
     CDS             3885..4097
                     /locus_tag="VIY07_14120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382928.1"
                     /translation="MSRVLVMRVQKRKGAIWVLVGLALLLLAAANGHLVYVAMTSQPD
                     CVAHVRQGEGNGAHERFSAAKSSCTP"
     gene            4131..4916
                     /locus_tag="VIY07_14125"
     CDS             4131..4916
                     /locus_tag="VIY07_14125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HEY6382929.1"
                     /translation="MTKIPAVVARAPREDKWNRHLAPSAAFSWLAAGWRDLIVQPLSS
                     LGYGALVFLVSVAIVVGLFWFGWDYILFPAFAGFMVVGPILAVGLYEKSRRIAAGEPV
                     GLAHMIFVKPKSGGQILFTGVLLCLLMLVWMRAAVIIYALFFGLLPFPGLGQIVPMLF
                     TTPTGWAMLLVGGAVGGLFAAFSFAISAFSIPMLLNERVDALTAMGTSTALVWNNLPV
                     MLTWGAIVVGLFLISLATGLLGLIVVFPILGHGTWHAYRAVRK"
     gene            4994..>6273
                     /locus_tag="VIY07_14130"
     CDS             4994..>6273
                     /locus_tag="VIY07_14130"
                     /EC_number="7.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015662 - P-type ion transporter activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0019829 - ATPase-coupled monoatomic cation
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEY6382930.1"
                     /translation="MTDRRRAKSDEILLASRDLGEGLRQTDLSVPTIHCGGCIQKIEK
                     TLDALPGVEQARVNLSAKRVTIRWRADGTPPPLLESLSRIGYEAHLYDAVTDSKDDTV
                     AKLVRALAVAGFAASNIMLLSVSIWSGAEPATRDLFHWMSALIALPAVAYCGRIFFGS
                     AWQSLRHGQTNMDVPISIGVLFAFGLSLYETLNRGPHAYFDASITLLFFLLIGRTLDH
                     MMREKARVAVKGLARLTARGALILQPDGTQIYLPLDEIGPGMTILLTAGERVPVDCRV
                     LKGQSDIDCSLVSGESIPQTAGAGSLLQAGTLNLTGPLTIVATAAAKDSFLAEMIRMM
                     EAAESGRSTYRRIADRASRLYAPVVHVTAVATFIGWVAATGDVHRALTIAIAVLIITC
                     PCALGLAVPMVQVVAARRLFEQGIMLKDGGALERL"
BASE COUNT         1210 a         1841 c         1821 g         1401 t
ORIGIN      
        1 aagcctgtcc tttccaaaaa aaaattggcg ggaatcaggc gtacggacct gcagcggcgg
       61 catggtctca gcgtcccgtg acggcacccg ggtcatacta ccaaattacc ggcaaaacca
      121 aacggtgttc cggcgtcccg cggggcgggt ttcgggccat tctctttgtt gagtgacttg
      181 gaactgtgtt tttgccttct gtgtaattgc tcaagggtca ggcgtggtgc gccataattt
      241 gttttcaatg cgctctaacg ccttgagtca aagcttcacg gtgcagcctg ggtctcgagt
      301 taggcctgat tgcaaaacgc gcactgcaag agtttgaggt agatcaatgt gccccgacct
      361 caattgcttt cctttatcgc aaagttcatt gcgaccaggg gactcctgtt aaaataaaag
      421 ttcgtcatcc acttaaggtc gaattagatg atcggccaac ttaccaaaaa tgagcgccaa
      481 attgccctga tcatcctgct cgcgctcgcc gtctgtggac tagcaatggc ggttgccggc
      541 cgcgacgatc cacttggagc gcacggcgct ctggtcattt tggcagcgct tgcaggaatc
      601 tttttcgtca ttgcgggata ctatttgccc gaacccacgg aagaacggcg ctatcactac
      661 tacgacgatc caaccaaagc cggcatcatc cttgccatgg tctgggccgt gttcggcctg
      721 tttgtcggcg attggggggc ttggcttttc gtctacccag aatttaactt cgatgccggc
      781 tggtcgagct tcgggcgaat tcgcccggtt catactacag ccgtcatctt cggtttcggc
      841 ggcaatgcgt taatcgcaac gtcgctgtat gtactgcagc gaacgtccag agcgcgactc
      901 ccggaccaac tgagcccatg gtttgttctg cttggctata atctgttctg cgtggtttcg
      961 gttactggct acatgatggg aatcacgcaa tcgaaggaat atgccgagcc ggagtggtac
     1021 gccgacatct ggctggtgat cgtttgggtt acatatttca tcatctacct acgcacgcta
     1081 gcgcggcgca aggagccgca catctacgtg gccaattggt actacatggc tttcattttg
     1141 gtcgtagctg tcttgcacat cgtcaataat ctcgcgatcc cggtgtcgct cggacacacc
     1201 aaaagttact cgtccttctc gggcgtccag gatgccatga cgcaatggtg gtacggccac
     1261 aacgcggtcg cgttcttcct gaccgcggga ttcctcggaa tgatgtacta ctacctgccc
     1321 aaacgcgccg accgaccaat cttttcctac cggatgtcga tcatcagctt ttggggcatc
     1381 acgttcctct atatgtgggc gggatcgcat cacctgcatt acacggcgct gccgcattgg
     1441 gtgcagacgc tcgggatgac cttctcggtg atgctgctgg tgccatcatg ggcatctgcg
     1501 gtcaatgcgc tgctgacgct caacggcgcc tgggacaagg tccgtgatga cgcgacacta
     1561 cgcttcatga tggttgcggc tgtgttctat ggtctgtcga cgttcgaggg atcgttcttg
     1621 gcggtccggc ccgtcaattc tctctcccac tatacggact ggacggtcgg ccatgtccat
     1681 gccggcgcgc tgggctgggt cgcgctgatc accttcgggg cgatctatgc gtcggtgcct
     1741 tggctctgga aaagggaggg catgtattcg gcaaggctcg tcgaggtcca tttctggttc
     1801 gccgtagcag ggacaatcat ctacgtcttc gcaatgtgga actccggcat catccaaggc
     1861 ctgatgtggc ggacctacaa cgaaagcggg acgctcgctt tctcatttgt cgattcactt
     1921 gttgcgatgc gtccctatta catcgcacgt gcaattggcg ggctcttctt cctcattggc
     1981 gcagtcgtcg gttgctacaa catctggatg acgatccgca ctgcttcgcg caaacccagc
     2041 gaagcgattg cggaacgccc cgatccggtg atcgcgggcg cgcccgtgct ccagcccgga
     2101 gagtgacgca gatgttcgga ttgcactatc ggctggaacg caaggcaatc ggcctggtgc
     2161 tcgcgatcat cggcgtcacc agcatcggtg gcattatcga gatcgtgccg ctattcacta
     2221 ttcgccaaac cgtggaagac gtacccgata tgcgagttta tacgccgctc gagcttgcgg
     2281 gacgcaacat ctatatccgc gaggggtgct acgcctgcca ctcgcagatg atccgcaccc
     2341 tgcgagacga ggttgagcgt tacggccctt actcgctcgc gatcgaatcc aaatacgatc
     2401 atcctatgtt gtggggctcc aagcgaacgg gaccggattt ggctcggatc ggcggcaagt
     2461 attccgacga atggcacgtt gcccatctga acaatccccg cgaggtggtc tggcagtcga
     2521 ttatgccagc ctataggtgg ctctcaagaa cagcgctgcg gagcgatgac ctcggactgc
     2581 acctcaaggc ccttcgagcg gtcggtgtgc cttacacgga cgagatgatc gccaatgcgc
     2641 aatccgatgc ctatggacag gctgcgcccg acacgccgtt cgccgagggc gtcgtcaaac
     2701 gttacggccg ggcgacgaat gttcgcgcct tcgatggcgt gcccgacgtg cttactgaga
     2761 tggacgcact tgtcgcgtat ctccagatcc ttggacggtt gaccgatgcc gcccataagc
     2821 ccgtcgctgc gatcgggagg tgaccatgga gatcgatcac ggcacgctgg tgtggttctc
     2881 gaagtctttc ggcctgttct acctgatcgg gctattcctc attgtcgtcg tctatgcctt
     2941 ttggccgtcc aacaagaaac aattcgatga cgctgcgaag tccatccttc gcgacgagga
     3001 cgtgccatgg cggtagaaga gcgcgacccc cacaccggct acacgaccac cggtcatgaa
     3061 tggaacggca tcaaggaact caacacgccg gtgccccgga tagtctattt cttcctgatc
     3121 gtaacggcgc tcttttctgt cgtttattgg gtgctcatgc cagcgtggcc gctcggtctg
     3181 acctatacga agggattgct gggcatcgac cagcgcacca ccgtcacaga atcgctcaaa
     3241 caagcggcat tggaacgcga ggcctggaca cgacaaatcg aaacggagag ctatcaggcc
     3301 attcaaaacg atccaaaact gatgacaatc gtgcgccaga ccggccgcac attgttcggc
     3361 gataactgcg cgccttgcca tggcttcgat gcgaagggcg gcaaaggctt tccaaacctt
     3421 acaacgactt cctggctctg gggcggcgat ccggaaacca tcgccgaaac catccgggtc
     3481 ggcatcaatt cagcccatcc gaaaacgcgc gcgggtcaaa tgctcgcctt tggtcgcgac
     3541 cggatattac agcccgccga cgtggacaac gtggtcgact acgtccaatc cctgtccgac
     3601 cctgatgtgt caaagcagat tccaccggcg aagctcgaag cgggcaaggc gacgttcgcc
     3661 tccacctgcg ccagttgcca cggcgacgac ggcaagggga aaactgaatt cggcgcgccc
     3721 gacctgacgg acaaggtctg gatttacgga ggcgacgccc agtcgatctt aatgagcgtg
     3781 cggaacggtc ggcagggtca catgccgaca tgggaaaaca gactcagcgc cgtcgatcgc
     3841 aagattctgg cgctctacat cttcgatctg aggtcgcctg gccgatgagc cgtgtactgg
     3901 tcatgcgggt gcagaaacgg aaaggtgcga tctgggttct ggttggcttg gccctgctgc
     3961 tcctcgctgc ggccaacggc catctcgttt acgtcgcgat gacatcccag ccggattgcg
     4021 tcgcacacgt ccggcaaggg gaaggcaacg gagcgcacga acggttcagc gcggcgaagt
     4081 cctcatgcac gccttgataa atgcgtagtg gaagcggagc gaggccgacg atgacgaaga
     4141 tcccagccgt ggttgcccgc gcgccgcggg aagacaaatg gaaccgtcat ctggctccat
     4201 ccgccgcctt ctcatggctc gccgcaggtt ggcgtgacct gattgtgcaa ccactctcta
     4261 gtctcggcta cggcgcgctc gttttcctgg tctcggtcgc catcgtcgtc ggtcttttct
     4321 ggttcggctg ggactacatt ctgttcccgg ctttcgccgg gtttatggtg gtaggcccga
     4381 tcctcgccgt tggtctctat gaaaaaagcc gtcgcatcgc cgccggtgaa ccggtcggac
     4441 tcgcgcacat gatttttgta aagccgaaat cgggcggaca gattctgttc acgggcgttc
     4501 tgctctgtct gctgatgctg gtgtggatgc gcgccgcggt catcatctat gccctgttct
     4561 tcggactgct gccatttccc ggtctcggcc agatcgtccc catgctgttc accacgccca
     4621 ccggatgggc aatgctgctt gtcggaggcg cggtcggagg attgttcgcg gctttctctt
     4681 tcgccattag cgcgttctcg atccctatgc tgctcaatga acgagtcgat gcactcacgg
     4741 cgatgggaac gagcacggcg ctggtctgga acaacctccc agtgatgctg acctgggggg
     4801 cgatcgtggt gggtctcttt ttgatcagcc tagcgacagg ccttcttggt ctgattgtcg
     4861 ttttcccgat actcggccat ggcacatggc atgcataccg cgcggtaagg aaatagacag
     4921 gcaccagcaa accgcaaaac ccaagagtag ttcgatgacg tgctgcgcgc ccagtgtcga
     4981 atttgccgac gtaatgactg atcgacgtcg agcgaaaagc gacgaaatac ttctcgcgag
     5041 ccgtgacctc ggcgaaggcc tgcgtcagac tgacctctcc gttccgacga tccattgcgg
     5101 cggttgtatt cagaagatcg aaaagacact cgatgctctg ccgggagtgg agcaggcgcg
     5161 ggtcaatctt tcggccaagc gggtcacgat ccgctggcgt gccgacggca cgccaccgcc
     5221 cctgctcgag tcactaagcc gaatagggta cgaagcgcac ctctatgatg ccgtcacgga
     5281 ctccaaggac gataccgtgg cgaaattagt ccgcgcgctt gccgtcgcag gcttcgcggc
     5341 aagtaatatc atgctgctgt cggtgtcgat ctggtccggc gcggagccgg caacccgaga
     5401 cctgttccac tggatgtcgg cgctgatcgc tcttccggcc gtcgcctatt gcggacgtat
     5461 ttttttcggc tcggcctggc aaagcctgcg ccacggccag accaatatgg acgttccgat
     5521 ttcgatcggt gtcctgttcg cattcggtct aagcctgtac gaaacgttaa accggggacc
     5581 acatgcttac ttcgacgcat cgataacttt gctgttcttc ctgctgattg ggcgcacgct
     5641 cgatcacatg atgcgggaaa aggcacgagt cgccgtaaag ggccttgctc ggctcactgc
     5701 gcgtggcgcg ctcatcctgc agcctgacgg cacgcagatt tatcttccat tagacgagat
     5761 cgggccgggc atgaccatct tgctgacggc cggtgaacgc gttccagtcg attgccgagt
     5821 gttaaagggg cagtccgaca ttgattgctc gctcgtctca ggcgaaagca tcccgcagac
     5881 ggcaggtgca ggctccctgc ttcaggccgg cacgcttaac ctgacgggcc cgcttacgat
     5941 cgtcgcgacg gctgccgcaa aggactcgtt cctggccgag atgatccgga tgatggaggc
     6001 ggcggaatcc ggacgctcga cgtaccggcg tatcgcagac cgagcatctc ggctatatgc
     6061 tcccgtggtt cacgtgacag ccgtggcgac atttattggt tgggtggctg caaccggaga
     6121 cgtccaccgc gcactcacta tcgccatagc ggtcctaatc atcacatgtc cctgcgcgct
     6181 cggcctcgcc gttcccatgg tgcaggtcgt tgccgcgcgg cgtctgttcg aacagggcat
     6241 catgcttaag gacggcggtg cgctcgaacg cct
//
LOCUS       DATDHO010000732         2123 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_284333, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000732 DATDHO010000000
VERSION     DATDHO010000732.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284333"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1301..1588
                     /locus_tag="VIY07_14135"
     CDS             1301..1588
                     /locus_tag="VIY07_14135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382931.1"
                     /translation="MSGGERWTPAHRALSFRMPLRSGTRRLEIGRFALNKEYQLGDDE
                     VHQLTEVVTGFTGPCDEAAARAYTGPAEGRDGALLRLPNSSSCSTSCLRQG"
BASE COUNT          410 a          636 c          669 g          408 t
ORIGIN      
        1 gctccggctg ttgggcgcgc gacgcgagcg gccatgcgat gaccatgccg ccaaatagct
       61 cgatgaattc gcgtcgtttc atcggatcac ctcgcggcag accaggaggt cccgaatcga
      121 ggtgggcgcg gtcggcgcct ccgaccgaaa ggatagcaca ccgcgatgag gcaggacact
      181 gctgcaccgc gggagttcaa tcccggctct gaccgaagag cgtcgatttg gtcccgtttg
      241 caacatttcc gctttaccct cgggacccga catagggcga acatcgttga accgctgctc
      301 agtgccatta cctgactcat gcaccgcagc aaacgactat tcgatcacct cgtcggcacg
      361 ggcgagcagc atcgagggca cttcgaggcc gagcatcatc actgtcgcca agttgatgcc
      421 gcgcgaggcc caggaggtcc ggatcaatgc caggcacgga accgagtctc gaaggttccg
      481 gccggcacta tgggcagagc cccaatgagg aggttggtcg tgcgcgcacc tcgaccagcc
      541 ggccgtgacg ctctgacggg cggcatgagc atccgcaaga cggcggctaa gttcggcgtg
      601 aacaagagca ccgttcagcg cgtcggtgcc ggccctttcg ccgcggtcga gccgcaagcg
      661 caaacgcggc gtaggccgat gaccggattg cttggacgcg ggcgcagctg cgggcggaat
      721 tgctcggaac tacgatggcc gcgatctcgg tggcgcgaga agcattcgca acctagtccg
      781 cgtgcatgag aattagggcg cgggccgagg gggccatgca gtgctattgt actccagctg
      841 ctgggcgggg ctttgccaga taccctcgcg cgcgtggaca gtttgtttca caaggcgtag
      901 gcttctatcc atcagcgact acaacgtttg agcgaggctg gcggggtggc tgagagacag
      961 atcgggctcc ggcctgatcc aaagagggag agcgcgccat gcgggcactc cttaaacagc
     1021 tacccatcga agtacgggca tggctaaagg aataccggct ccgaagaaag caacctcgaa
     1081 accgcgtccg tttcgtttcc tacgtgccgc gtaagatccc acctggatgg atcgtcgtcc
     1141 acaatcacgt tcgccctgac ggctttccca acacaaaagt gggagattgg ggcttccgcg
     1201 tgtttctcgc tcgccttgac gctgacgtga cgtacgtcag atgtaaatgt gggtgggcac
     1261 cacacttgga gacacactac cgtgtgaaag ggatcaacct gtgagcggcg gtgagcgctg
     1321 gactccggcg caccgtgccc tatccttccg gatgccgttg cgttccggta cccgccgtct
     1381 cgagatcggc cgcttcgccc tcaacaagga gtatcagctc ggcgatgacg aggtgcatca
     1441 gctaaccgaa gtggtcaccg gcttcaccgg cccgtgcgac gaggcggcag cgcgtgcgta
     1501 cacaggcccg gctgaagggc gagacggtgc tcttctgagg ctgccgaact cctcgagctg
     1561 ttcaacaagt tgccttcggc aaggttgagg cccgctccag ataaaaaagg agaagtgaaa
     1621 tggagttctt tgctggattg gtcatcggcg gtgtggtggt ttatctttgc cacggctgga
     1681 tcaaggaaaa agtcgagggc tatcgtggag gcccgcttga tcgccgatga ggcggccaag
     1741 caggcgccgc gagctggact gttcgtttgc cgggaaccga cagggagccc gagcattgat
     1801 ttggcgccgg gtggaataac cgcttgtccc cctcaagccc cactatccat tcgccaaaga
     1861 ccctggcccc cctcgtgctg gggtctttcc tagtgcgcgc ttattcgtac ttcgccgcag
     1921 cgcagccttg ctgcccaccg gaaccatcgc atcttgttcc tggttgtcag ttatcggcgc
     1981 tcaacaacct tcggagtttc ccccgaagag cgcaaattgg cgccgccgga gagtcgctgg
     2041 cgaacggagg cgccaatgat tggccgtact ctgcttagct tggtaaccct tgcactcgcc
     2101 ggctttgtgg ctctcgtgct gat
//
LOCUS       DATDHO010000733         4502 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_432403, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000733 DATDHO010000000
VERSION     DATDHO010000733.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4502
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432403"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..975
                     /locus_tag="VIY07_14140"
     CDS             <1..975
                     /locus_tag="VIY07_14140"
                     /inference="COORDINATES: protein motif:HMM:NF012506.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HEY6382932.1"
                     /translation="LNGELPTKSQLASFDAELKGARNLPAPIFDIIRTIKSAHPMDVL
                     RTAASALSAFDPETSENSREATLRKAVRLTSQVPIIVAAHSRIRAGNEPVTADRTLAH
                     AANLLWMLTEKKPSPDAAHLIDRDLILHAEHGSNASSFAARVVIGTEANLHAAITAAI
                     AALSGPAHGGAAEDVMKMAEEIGDPSRAADYVKEKRKAGIAVTGFGHRVYRAEDPRAR
                     HMRAGVERLSKQMGEPKWFEILQAVVTAMAPYARHGVNVNVDFYSGVVYHLLGIERDL
                     FVPIFAIGRVPGWAVQVLEQLENNILLRPLTLYNGPDARAYVPLAQRG"
     gene            1222..2178
                     /locus_tag="VIY07_14145"
     CDS             1222..2178
                     /locus_tag="VIY07_14145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6382933.1"
                     /translation="MHLTRRSFATFVVLTLCAALFGGRAVAAGYPERPIELIVPWGPG
                     GGADQLARLVSKLMEPMLGQGIPVVNVPGGTGATGMAKLLAAPADGYSMAIYIADSHA
                     LLAGKSPRWTMNEITPVAVMIKGPSFIFVKEDSEFKTWADFEKAAKGNPGKLKVATLG
                     FGSVDDFSLTVLDRAGVKVVQVPFSKPSERYVSILGGHADALYEQAGDVAQFLNGKQM
                     RPILLFGEKRLPAFKDVPSSFELGYKVALPQFRSIVVRAGTPPDIVKKLSDALAKVYE
                     SPEYKKFLEEQFADPNSFEDASKAPAFVNEQLNDMRKTIATN"
     gene            2200..2742
                     /locus_tag="VIY07_14150"
     CDS             2200..2742
                     /locus_tag="VIY07_14150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY6382934.1"
                     /translation="MDKALFRSIVPYAVGLAVALALYLYAGTIEYSPRPGQLGPEVWP
                     RLAILLMGASCVFEISRRLIAGNQDATGFLEAFDREPQAEDKQPIYPRLLIGGIVLMA
                     IYAVLVPVLGFILGTFLFLAAFMYVGGYRAHRAIWGASALVTIFCGILFLRIAYVSLP
                     RGIPPFDRVTDIFFAIPSLW"
     gene            2747..4261
                     /locus_tag="VIY07_14155"
     CDS             2747..4261
                     /locus_tag="VIY07_14155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY6382935.1"
                     /translation="MIDILTQLAHGFVNCLTPLNMAMLLIGIVIGLLIGVLPGLTLVM
                     GVALALPFTYKMDVTASIILLTAMYVSGTYGGAFTAILFRIPGEPIDVPMLWDGYTMG
                     RKGKPAKALGWTLVAALGGGLLSAVVMVALTQPLAKFALRFSSPEYFVIVMFGLLSVV
                     AIGKGSLANAFISMSVGILISTVGTDPIYGAYRFTFGSPILADGIEFLVVMVGAYGVG
                     EVLTRLETGFATKPLDKISNARTELPTLKELNDIKGMFFRSSVVGDLIGLLPGAGATI
                     ASFVSYGIEARFGKRKNQMGTGVAEGIVAPQAAATASVGGAMVHLLALGIPGSGATAV
                     ILGAFMLHGIQPGPQVLVSSAPLVYTVFASLFIGLALMCAIGYFAIRPLVKILDFPEA
                     VVSAYVLILCFIGALSIRNNITDLWLIISFGILGYGFERLKFPVAPLVLGVILGPIAE
                     EAFMNTMISFSNDWTVFFTRPISGTIVALTVIVLLLPSIQRLLRSRLATALNRG"
     gene            4268..>4502
                     /locus_tag="VIY07_14160"
     CDS             4268..>4502
                     /locus_tag="VIY07_14160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382936.1"
                     /translation="MRTNLGFDQRTSGIAPGQRRKVADFNPQNPVKLAKEREHKLGVT
                     ARSFAILEHVAGSRAPVDVLDIIASLKLPKATAY"
BASE COUNT          827 a         1322 c         1338 g         1015 t
ORIGIN      
        1 ctcaatggcg aactgccgac caaatcgcag ctcgcgagct tcgacgccga gctcaagggt
       61 gcgcgtaatc tgcccgcacc catattcgac atcattcgca ctatcaaatc tgcccatccg
      121 atggatgtgc tgcgcacggc cgcgtctgcg ctttcggcct tcgatccgga aacatccgag
      181 aattcgcgcg aggcgacatt gcgcaaagct gtgcggttga cgtcgcaggt gccgataatc
      241 gttgcggctc attcacgtat ccgtgcgggc aacgagcctg tcacagccga ccggacgctc
      301 gctcatgccg caaatctgct gtggatgttg actgaaaaga agcccagccc cgacgccgcg
      361 catctgatcg atcgcgatct catcttgcat gccgagcacg gctccaatgc ttcatctttt
      421 gcggcccgtg tcgtgatagg caccgaggcc aatttgcatg ctgcaatcac cgccgcaatt
      481 gcggcgctgt ctggtccggc acatggcggc gccgccgagg acgtgatgaa gatggccgag
      541 gagatcggcg atccgtcgcg cgctgccgat tatgtaaaag agaagcgcaa ggcaggcatc
      601 gcggtcaccg gtttcggtca ccgcgtctat cgcgccgagg atccgcgcgc gcgccacatg
      661 cgcgccggcg ttgaacgtct gtcaaagcaa atgggcgagc cgaaatggtt cgagatcctc
      721 caggcggtgg tgacagccat ggcgccttat gcgcggcacg gagtgaatgt gaacgtcgat
      781 ttctattcgg gcgtcgtcta tcacctgttg gggattgagc gcgatttgtt cgtgccgatc
      841 ttcgccatcg gccgcgtgcc gggctgggcg gtgcaggtgc tggagcagct cgagaacaat
      901 atcctgctgc gtccgctcac tttgtacaat ggacctgacg cacgcgctta tgtcccgcta
      961 gcacaacgcg gctgattcag gctacgcgtc actgagggac gctgaatcgt tccgaattgc
     1021 gggacgcaat cgctggattt gccattgcgg gtcgaaactc ttctgatatc gtattgagaa
     1081 cggcagtctc gcataatgag acttcgtacg aggcgttttg cccggacgat cagccagcga
     1141 tcaaaaaacg acgaacatcc cgcagggcca ggccgcaggc ggaatgacca agcaagcggc
     1201 cgatggcagg gaggaaagtc catgcatttg accaggcgaa gcttcgcgac atttgtggtt
     1261 ttgacactct gcgccgcgct gttcggcgga agggccgtcg cagccggata tccggagcgg
     1321 ccgatcgaat tgatcgttcc ttggggtccg ggtggagggg cagaccagct cgcgcgactt
     1381 gtcagcaagc tgatggagcc aatgctcggc cagggcattc cggttgtaaa cgtccccggc
     1441 ggtaccggcg cgaccggcat ggcgaagctt ttggcggcgc cagccgacgg ctattcgatg
     1501 gcaatctaca tcgcggacag ccacgcgttg ctggccggaa aaagcccgcg ctggacgatg
     1561 aatgaaatca cgccggtggc agtcatgatc aaagggccat cctttatttt cgttaaggag
     1621 gacagcgaat tcaaaacctg ggctgacttc gaaaaggcgg ccaaaggcaa tcccggcaag
     1681 ttgaaagtag cgacgctcgg gtttggcagt gttgacgatt tctcgctgac ggtgcttgac
     1741 cgggccggcg tcaaggtggt gcaggtgccg ttttcaaagc caagcgagcg gtatgtttcg
     1801 atcctcggcg gccatgctga tgccctttat gagcaggccg gcgacgtcgc ccaatttctg
     1861 aacggaaagc agatgcgccc gattttgttg tttggcgaaa agcgcctgcc ggccttcaag
     1921 gatgtgccgt cttcctttga acttggctac aaggtcgcat tgccacagtt tcgttcgatc
     1981 gtcgtgcgtg ccggcactcc gccggatatc gtgaagaaat tgtcggatgc gctggccaag
     2041 gtttacgagt cgccggaata caaaaaattc ctcgaggagc agttcgccga cccgaacagc
     2101 ttcgaggacg cctcgaaagc tccggctttc gtcaacgagc agctcaatga catgaggaag
     2161 acgatagcga cgaactgacg tcgcgcgccg gcaacagtta tggacaaggc gctgttccgc
     2221 tcgatcgtgc cctacgcggt gggtcttgcc gtcgccctcg ctctctacct ctatgccggc
     2281 acaatcgagt attcaccccg gcccggccag cttgggcccg aggtctggcc gcgccttgcc
     2341 attctgctga tgggcgcctc ctgcgtattc gaaatctccc gacgccttat tgccggcaat
     2401 caggatgcaa ccggctttct ggaagcgttc gaccgggagc cgcaagccga ggataagcag
     2461 ccgatctatc cgcgcctgtt gatcggcggc atcgtactga tggcgatcta cgccgtgttg
     2521 gtgccggtac tcggcttcat tctcggcaca ttcctgtttc ttgcagcatt catgtacgtg
     2581 ggcggctatc gcgcgcaccg ggcgatctgg ggcgctagtg cattggtgac catcttctgc
     2641 ggcatcttgt ttctgcgtat cgcctacgtt tcgctgccgc gcggcattcc tccgtttgac
     2701 cgcgtaaccg atatcttctt tgcaattccg agcttgtggt gagcgcatga tcgacatcct
     2761 cacccaactc gcccacggct tcgtcaactg tcttacgccg ctcaatatgg cgatgcttct
     2821 tatcggcatc gtcatcggct tgctcatcgg cgtgttgccc ggcctgacac tggttatggg
     2881 cgtcgccctg gccctgccgt tcacctacaa gatggacgtt accgcgtcga tcatcctgct
     2941 gactgcgatg tacgtctctg gcacctatgg tggagccttt accgcaatct tgtttcgtat
     3001 tcccggcgaa ccgatcgacg tgcccatgct gtgggacggc tacacgatgg ggcgcaaagg
     3061 caagccggcc aaggcgctgg gctggaccct ggtcgctgcg ctgggcggcg gtctcctgtc
     3121 ggccgtggtc atggttgccc tgacgcagcc gctggcaaaa tttgcgcttc gattctcgtc
     3181 gcctgaatat ttcgtgattg tcatgttcgg cttgctcagc gtggtggcga tcggcaaagg
     3241 atcgctcgcc aatgccttta tcagcatgag cgtcggcatt ctgatttcga ccgttggcac
     3301 cgatccgatt tatggcgcct atcgcttcac ttttggctcg ccgattctcg ccgacgggat
     3361 cgagtttctg gtggttatgg ttggcgctta cggcgtcggc gaggtgctca cgcgcctgga
     3421 gaccggattt gccaccaaac cgctcgacaa gatttcgaac gcgcgcaccg agctgccaac
     3481 gctcaaagaa ctaaatgata tcaaagggat gttctttcgg tcatccgtgg ttggcgatct
     3541 aatcggcttg ctgcccggag ccggtgccac cattgcatca ttcgtcagct acggcatcga
     3601 ggcgcgtttc ggcaagcgca agaaccagat ggggaccggc gttgccgagg gcatcgtggc
     3661 gccgcaggcc gccgcgaccg cctcggtcgg cggcgcgatg gttcatctgc tcgctctcgg
     3721 cattcctggc agcggcgcga ccgcggtcat cctcggcgcc ttcatgctcc atggcattca
     3781 gccaggtcca caagtgctcg tgagctcggc acctctcgtc tataccgtgt tcgcttcgct
     3841 gttcatcggc ctggcgctga tgtgtgcgat cggttatttc gctatccggc cgctggtgaa
     3901 gattctcgat ttccccgaag cggtggtctc ggcctatgtg ctgattcttt gcttcatcgg
     3961 cgctctgtcg atccgcaaca acatcacgga tctctggctg atcattagct ttggcattct
     4021 tggctacggt ttcgaacggc tgaaattccc tgttgcgccg ctggtgctcg gcgtgattct
     4081 cggtccgatc gccgaagaag cgttcatgaa cacgatgatc agtttttcca acgactggac
     4141 ggtgtttttt acgcggccaa tctccggaac catcgtcgcg ttgacggtca tcgttctgtt
     4201 actgccgtcc atacagcgtt tactgaggag ccgtctggcg acggctttga atcgaggtta
     4261 gtgagccatg cgtaccaatc ttggatttga ccaaaggacc tcgggcattg cgcctggtca
     4321 aagacggaaa gtagcggatt tcaatccgca gaacccggtc aagcttgcga aagagcggga
     4381 gcacaaactc ggtgttaccg cacggtcctt cgccattctc gaacacgtcg cgggttcgcg
     4441 cgcgccggtg gacgttctcg acatcattgc ctcgctcaaa ctgcccaagg ctacggctta
     4501 tc
//
LOCUS       DATDHO010000734         2882 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_333617, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000734 DATDHO010000000
VERSION     DATDHO010000734.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_333617"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="VIY07_14165"
     CDS             complement(<1..250)
                     /locus_tag="VIY07_14165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003584013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxide hydrolase N-terminal domain-containing
                     protein"
                     /protein_id="HEY6382937.1"
                     /translation="MNAETKTSSSDKTAVRPFRVEVPEAELADMRRRIKATRLPEKEP
                     VSDFSQGVQLAVIQALARYWATDYNWRRCEAQLNSHPQF"
     gene            995..1954
                     /locus_tag="VIY07_14170"
     CDS             995..1954
                     /locus_tag="VIY07_14170"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6382938.1"
                     /translation="MNLLSSVVAAAACALVAGHAASQYPSKPVRMIVPFPAGGLADIV
                     ARVVAAPLSQSFGQPVLVENKAGADGQIAALETRRSPADGHTLFFATNSALLQVPLIR
                     KSPPYDPVTDFTPISFAGTFSFFLFVHSSVPVNSFEGMIDYARSNPNKLSYGSANMTS
                     FLATMQLLTQTKIEMVHIPYKGEAPAIPDLAAGRVQVMFATPTSALPLAKEGKLRVLA
                     ALLPQRSSLLPDVPTMAELGYPQVSVTAWGGFFGPAKLPNEVTVRLAREFNTILARSD
                     VREQVEKHGFVMRGSSPEELADFLNKQLDVWARSINEAKLARE"
     gene            2224..2775
                     /locus_tag="VIY07_14175"
     CDS             2224..2775
                     /locus_tag="VIY07_14175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382939.1"
                     /translation="MNAAGNAGVVTGSITYAGSFSGYSVLYRALTGADAGRIQTGQGA
                     LLIPYIPKGDVSLLGTRGELFAVELPAGEYEFYSWSVGSGFADVRPTSPFSVTFIVIP
                     GKVMYVGNFHFRQTASMGLTVTGVQVDYVDRAERDLPLLSKKYPTLAAAGIDVGLERG
                     AAYEQLGGPHATTITIPVPIPVR"
BASE COUNT          534 a          894 c          841 g          613 t
ORIGIN      
        1 tgaattgggg atgagagttc agttgcgcct cgcacctccg ccagttgtaa tcggtcgccc
       61 aataccgcgc gagcgcttga atgacggcga gttgcactcc ttgcgaaaaa tcggagacgg
      121 gttccttctc gggcaaccgc gtggccttga tgcgccgacg catatcggcc agttccgctt
      181 ccggaacttc cacacgaaac ggtcgcacag cggtcttgtc gctgcttgac gtttttgttt
      241 cggcgttcat agccacgctc ctttctgaaa gtaaaagtcc gggaaaaccg agcaggctcg
      301 cagccacggc tgccgctgca gcaccgcaaa agcgacggcg attgaggccg aacgtctttt
      361 acatgacgaa ctccttggca actgctggtt gaattgactg tgcccgcaaa ggctcacaac
      421 ctgggccgaa cttgctagct ggcacggcgc cagtatccgc agttctacgt gaaccgcaat
      481 tggaccttgg tccgacccct cgacccagct cacgagttac gtcggagaac gtggtcgatc
      541 gtttcctgct ggccgttcag cgagatccgc ggacgtccgc ttgcttagag cgcgaccggc
      601 agcaagggtc ggttccgccc gccacacccg ctcgattgac atcactcgac cctacgccct
      661 cccctcgccc gctcgaacca gtctgcgcgg cgagtagtgc agctttctct gattgcacct
      721 tgcagccccc cgggctcagg caaccgtagc ttcgccggta tcgccgcgtg cccatgagcg
      781 gtcggtcgca agctcacgct gccttcccta aagggcgcag aatcccgtta acgagatcct
      841 gttctcccgg ttaaatcgaa gatgtctttc ggtaaaccac gtgagaccgc atgaaatgtg
      901 accactcgga cctcaagtgg cttagggaat tttctatcgc tagatcggaa ttagaggtac
      961 cgcgggtcgg caacccctct tgggagagtt gatcatgaac cttctttcgt ccgtcgttgc
     1021 agccgccgcc tgcgcgctcg ttgcgggcca cgcagcctcg caatacccga gcaagccggt
     1081 tcgcatgatc gtgccgttcc ccgcgggagg gctcgccgat atcgtagccc gggtcgtcgc
     1141 cgcgccactc tcgcagtcct ttgggcagcc ggtcctggtc gagaacaagg ccggcgccga
     1201 cgggcagatc gcggccctcg aaacgaggag gtccccggcc gacggccata cgctcttctt
     1261 cgcgaccaac tcggccttgt tgcaggtacc cctcattcgc aagagcccgc cctacgatcc
     1321 agtcactgac ttcacgccga tctcgtttgc cggcactttc agtttcttcc tgttcgtcca
     1381 ttcgagtgtt ccggtgaact cgttcgaggg gatgatcgac tacgcgcgca gcaacccgaa
     1441 caagctcagc tatggctccg caaacatgac gagcttcctc gccaccatgc agttgctgac
     1501 gcagacgaag atcgaaatgg tccacatccc ctacaagggc gaggcgccgg caattccgga
     1561 tctggccgct gggcgcgttc aggtcatgtt cgcgacgccg acgtccgcct tgccgctcgc
     1621 gaaggaaggc aagctgcgcg tactcgcggc gctccttccg cagcgcagct cgctgctccc
     1681 tgatgttcca acgatggcgg agctggggta cccgcaagtc tccgtgactg cctggggagg
     1741 ctttttcggg ccggcgaagc tgccgaatga ggtcacggtg cgccttgcgc gcgaattcaa
     1801 cacgatcctc gcgcgctccg acgtgcgcga gcaggtcgag aagcatgggt ttgtgatgcg
     1861 aggctcatcg cccgaagagc ttgcggattt cctgaacaag cagctcgacg tctgggcgag
     1921 gtcgatcaat gaggcaaagc tcgcgcggga atgagttgag cggagccttg aactgtacaa
     1981 agcgaggccc tgacgtgtcg agcttggcgc ggcctaacat ccaaatcgag ccgaccatcg
     2041 gcaagcaagg cttgccgata ccctcgtcgc tccgttcctc ggcggcggct catttggcgc
     2101 gttatctttc aacacagctc taaccggtct tcgcatcaaa tggtccgtgc gatattgctc
     2161 tcttctgtcg tttgcctctt ggctacgggg tgcgcaaccc cgagtgtttc gcctgactac
     2221 agattgaatg cggctggcaa cgcgggcgtt gtcactggtt cgatcaccta tgctggttcc
     2281 ttttctggct atagcgtttt gtatcgggcc ttaaccggag ccgatgcggg ccgcattcag
     2341 acagggcaag gagccctact tattccgtac attccaaaag gtgacgtcag cctcctgggt
     2401 acacgaggtg aactgttcgc tgttgagctt ccggccggcg agtacgagtt ctactcctgg
     2461 agcgtcggta gtgggttcgc cgatgtgcgt ccgacatctc cgttcagtgt gacgttcatc
     2521 gtgatccctg gcaaggtcat gtacgtcggt aattttcact tccgtcagac cgcaagcatg
     2581 ggactcacgg tgactggggt gcaagttgat tatgtcgacc gcgctgaacg cgatctacct
     2641 ctactaagca agaaatatcc tacgctagca gctgcgggaa ttgatgtggg gctagagcga
     2701 ggtgctgctt acgaacagct gggaggcccg cacgccacga ccattacaat ccccgtgcca
     2761 attcccgttc gatgagagac aaccggcccg tgcagcggac gcgcggaaac gtggttggtc
     2821 tatccgtagc gtcctcgcgt gcgtgcgccc tcgagcgcgc cgctgaaggg cgacgttgag
     2881 cg
//
LOCUS       DATDHO010000735         5868 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_185517, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000735 DATDHO010000000
VERSION     DATDHO010000735.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5868
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_185517"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..1444)
                     /locus_tag="VIY07_14180"
     CDS             complement(113..1444)
                     /locus_tag="VIY07_14180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY6382940.1"
                     /translation="MIRLIASVVCIAASLTAGVVTSSAMTIEKIVSPSGIEAWLVQEK
                     AVPLVTLNYAFHGGASQDDADKAGTANLAADLLDEGAGELDSKAYHERLEKKAIELSF
                     QVGRDYVHGTLRALNEHREEAFDLLGLALASPRFDADAIERVRGQLLATLRRDTTNPN
                     DLASRRWWRTAFPDHPYGRETKGTLETVPRIAAQDLRDYVRRVFARNELKVSIVGDVD
                     AKTAGMLIDRAFSRLPANNDLKPIANATPSGLGQRIVINLDVPQAVVIFGGQGIARQD
                     PEFIAAYVVNHILGGGSFSSRLYREVREKRGLAYGVSDSLVWFKRAAVMVGGTATQAE
                     RTADALAVIEQEIKRMADEGPTPDELAAAKSFLKGSYALSLDTSGKIAAQLTQIQIDD
                     LGIDYIQRRSALIDAVTIEDAKRVAKRLYGKGLLVTIAGRPKGLTSSGTTE"
     gene            complement(1441..2760)
                     /locus_tag="VIY07_14185"
     CDS             complement(1441..2760)
                     /locus_tag="VIY07_14185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HEY6382941.1"
                     /translation="MASPSLAAQQRGPEIADFTLANGLELVIIPDHRAPVVTHMIWYR
                     VGAADETPGKSGLAHFLEHLMFKGTAKNPAGKFSQVVARIGGQENAFTSQDYTGYFQR
                     VPSDQLKTVMEFEADRMTGLQLTDDVVLPERNVILEEQNQRVGNNPRARLTEQIEAAL
                     YLNHPYGKPVIGWRHEMEELSRDDAIGFYRRFYAPNNAIVVIAGDVSIAQARALAEET
                     YGKISRHAAMPPRKRAQEPPPAAARTVTLADARVEIPSLQREYLVPSFATGKRGESVA
                     LEVLAHVLGSGSNSRLYRALVVDKQVAVAAGAWYDASMLDLSRFTVSGSPRPGAALTQ
                     LETEIDAVIAQVIEKGVSEDELERTKTRLIADAIYAQDNQATMARWYGTALTTGASVN
                     DVRNWPDRVRAVTADQVRDAARQWLDKRRSVTGYLIKDTSPQAEKRS"
     gene            complement(2900..3583)
                     /locus_tag="VIY07_14190"
     CDS             complement(2900..3583)
                     /locus_tag="VIY07_14190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382942.1"
                     /translation="MRLTSVFGASAIFGLALGAAAVLFPAPARAADDEDSIDKKFMRS
                     IMSGLGLKRDGDEMINYRERSPLVIPPSRELPPPERSDAAIANNPAWPKDPDVERRRA
                     QAAMEKNRNVSDEREREQNPLRPDQLTPGGKPKKKQARKDDGYESPPSGFGSQILPSE
                     LGFKGFGSFFSGKKEESAKFTGEPPRELLTDPPPGYQTPSPDQPYGLGKAAPPKATDY
                     YSTHAEPTR"
     gene            complement(3641..4153)
                     /gene="lspA"
                     /locus_tag="VIY07_14195"
     CDS             complement(3641..4153)
                     /gene="lspA"
                     /locus_tag="VIY07_14195"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEY6382943.1"
                     /translation="MKAYLTGPQTGFGFAVAAIVCAIDQASKLYLLFVFDLAANGPVR
                     LGPFIDIILARNTGISYGLFQTEGPLGQWVLLAFKAVAVVLLWIWLAHAKDRLTALSL
                     GLIVGGAVGNAIDRLAYGWVADFVLFHISTPNWRFNWYVFNFADVAIVAGVIGLLYES
                     LRADRAAKAP"
     gene            complement(4267..>5868)
                     /locus_tag="VIY07_14200"
     CDS             complement(4267..>5868)
                     /locus_tag="VIY07_14200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HEY6382944.1"
                     /translation="IAMDKDIATKGDTLRHRALSAIKVTRWVPPQGENRITGMIESRP
                     DWVISRQRAWGVPIALFVKEKPDGSVEILQDPDVEVRIVEVFEQEGADAWYKPGARER
                     FLGRLANDSWKKIDDILDVWFDSGCTHAFVLEDPQQLPTLAGIERRLDGGKDTVMYLE
                     GSDQHRGWFHSSLLESCGTRGRAPYDLVLTHGFVLDEQGRKMSKSLGNVTAPQDVIRQ
                     SGADILRMWVCASDYADDLRIGPEILKTTVETYRKLRNTVRWMLGSLAHFNEEDRVKL
                     EKMPELERLMLHRLFELDGLVRKAYAEFDYKRIFAALSSFMTSDLSAFYFDIRKDTLY
                     CDPYSSVKRKACLTVLDSLFRCTVTWLAPMLCFTAEEAWLSRYGNAAKSVHLEPFPDV
                     PAAWRNDRLADKWRKIRTVRRVVTGALEIERAQKRIGSSLEAHPIVHVANPELYEAVV
                     DCDLAEVCITSAATLVQDEGPAGAFRLPDVAGVAVVSNLAEGRKCARSWKILTNIGED
                     PEYPDVSPRDAQALREWKTMRKAAE"
BASE COUNT         1123 a         1802 c         1773 g         1170 t
ORIGIN      
        1 gccgtgcgac ccgatgtgct cttcacgcgc actctcgatc gattggacga tgttcatact
       61 ggtatttgcc tagagtcgcg cgggaggcgc aacggcacaa accaacgcga ccctattccg
      121 tggttccgct cgacgtcagg cccttcggcc tcccggcaat cgtcaccagc agtcccttcc
      181 cgtacaaccg cttggccact cgcttggcat cctcgatggt caccgcgtcg atcagggcgg
      241 atcggcgctg gatgtagtcg atgccgaggt cgtcgatctg gatctgtgtg agctgcgctg
      301 caatcttgcc cgaagtgtcg agcgacaggg cataggagcc cttcaggaat gacttggccg
      361 ctgcaagctc atcgggtgtc gggccttcgt cggccatgcg cttgatttcc tgctcgatga
      421 ccgcgagggc gtcggcggtg cgctcggcct gggtggcggt gccaccgacc atcacagcgg
      481 cgcgcttgaa ccagaccaga ctgtctgaaa cgccataggc cagaccgcgt ttttcgcgca
      541 cctctctata gagacgcgat gaaaagctgc cgcctcccaa aatgtgattc acgacgtagg
      601 cggcaatgaa ttcgggatcc tgtcgcgcga tgccctgtcc accgaaaatg accaccgctt
      661 gcggtacgtc gagattgatc acgatacgct ggccaagccc gcttggcgtg gcattcgcta
      721 tcggcttgag atcattattt gcgggcagcc gggagaatgc gcgatcgatc agcatgccgg
      781 ccgttttggc gtcaacatcg ccgacaatcg agaccttgag ctcattgcgc gcgaacacgc
      841 gacgcacata gtcgcgcaga tcctgcgcgg cgatacgcgg caccgtttcg agagtgccct
      901 tggtttcgcg cccataggga tgatcgggaa aagccgttcg ccaccacctg cggctggcaa
      961 ggtcgttggg attggttgtg tcgcgccgca atgtggccag aagctgtccc cgcacccgtt
     1021 cgatcgcatc ggcatcgaaa cgcgggctcg ccagggccaa ccccagcaag tcgaatgcct
     1081 cctcgcgatg ttcgttcagc gcacggagcg tcccatggac atagtcgcgt ccgacctgga
     1141 agctgagctc gatagccttt ttctccaggc gctcgtgata ggccttgcta tcgagttcgc
     1201 cggcgccttc atcgagaagg tcagcggcga gattggcggt tcccgccttg tcggcgtcgt
     1261 cctggctggc gccaccatga aaggcgtaat tgagcgtgac gaggggaacc gccttttcct
     1321 gtacgagcca ggcttcgatg ccggagggac tgacgatttt ttcaatcgtc attgcagaac
     1381 tggttacgac gccggcggta agggacgctg cgatgcagac gacggatgca atgagccgga
     1441 tcatgaccgc ttctccgcct gcgggcttgt atccttgatc aggtagcctg taaccgaacg
     1501 ccgcttgtcc agccattgcc gggcggcgtc gcgcacctga tcggcagtga ccgcgcggac
     1561 gcggtccggc caattgcgga cgtcatttac ggacgcgccc gtggtcagtg cggtgccgta
     1621 ccagcgagcc atggtggcct ggttgtcctg ggcatagatc gcgtcggcga tgagccgggt
     1681 cttggtacgc tccagctcat cttccgacac gcccttctct atgacctggg cgataactgc
     1741 atcgatttcg gtttcgagct gggtaagcgc ggccccgggg cgcggcgagc cgctgacggt
     1801 gaacctcgac agatccagca tgctggcgtc gtaccacgcg ccggctgcga ctgcgacttg
     1861 cttgtcgacg acgagagccc ggtagagccg gctattcgaa ccgctaccga gaacgtgcgc
     1921 aagcacttcc agagctaccg actccccgcg ctttcctgtc gcgaaagatg gcaccagata
     1981 ttcgcgttgc aagctcggta tctcgacacg cgcatcggcc agcgtgaccg tgcgtgcagc
     2041 cgcgggcggc ggctcttgag cacgcttccg cggcggcatc gcggcgtgac gggatatctt
     2101 gccgtacgtc tcttcagcga gcgcccgtgc ctgcgcgatg ctgacgtcgc ccgcgataac
     2161 cacaatcgca ttgttgggcg cgtagaagcg ccggtagaag ccgatcgcgt catcgcgcga
     2221 cagctcttcc atttcgtgcc gccagccgat taccggtttt ccatagggat gattgagata
     2281 gagcgcagcc tcgatttgtt ccgtcaggcg agcgcgagga ttgtttccaa cgcgctggtt
     2341 ctgctcttcg agaatcacat tccgctcggg caaaaccacg tcatcggtaa gctgcaagcc
     2401 ggtcatccgg tccgcttcga attccatgac tgtcttcagt tggtcgcttg gcacgcgctg
     2461 gaagtatccg gtgtagtcct gcgacgtgaa ggcattctcc tgcccgccga tgcgcgcgac
     2521 cacctgcgag aattttccgg cagggttctt ggcggtgccc ttgaacatga ggtgttcaag
     2581 gaaatgcgcc agtccggatt tgcctggcgt ctcatcagcc gcgccaaccc tgtaccagat
     2641 catgtgcgtc accacgggcg cgcgatgatc agggatgatg acaagctcca atccgttggc
     2701 aagggtgaag tcggcgattt cggggccgcg ctgttgcgcg gcaagcgagg gggatgccaa
     2761 ggagccggca agcgcaatga gcgtcagagt tgatctggca aacacgatgt ggacctgaat
     2821 cagttgcgat tcgtgcagca gcacgagatc gggttacgcc gcccgccgta cgagaaagct
     2881 ggaaaaacgg ccgacacggt tatctggtcg gctcggcatg agtcgagtaa tagtccgtcg
     2941 ccttcggagg tgccgccttg ccgagcccat agggctgatc cggcgacggc gtttgatagc
     3001 cgggcggagg atcggtcaac aattcgcgcg gtggctcgcc ggtgaatttc gccgactctt
     3061 ccttcttgcc gctaaaaaaa gagccaaagc ccttgaatcc cagttcggag gggaggattt
     3121 ggctgccgaa acctgacggc ggcgactcgt agccgtcgtc cttgcgcgcc tgctttttct
     3181 ttggcttccc gccgggggtc aattgatcgg gccgcagcgg gttctgttcg cgctcgcgct
     3241 cgtcactgac attgcggttc ttttccatgg ccgcctgggc cctgcggcgc tctacgtccg
     3301 gatctttcgg ccaagccgga ttgttcgcga tggcagcatc gctccgttcg ggcgggggca
     3361 gttcacggct gggcggaatc accagcggtg aacgttccct gtagttaatc atttcgtcgc
     3421 cgtcccgctt cagccccagc cccgacatga tgctgcgcat gaacttcttg tcgatcgaat
     3481 cctcatcgtc ggccgcccgc gcgggggccg ggaaaagcac cgcagcggca ccgagtgcca
     3541 ggccaaaaat ggcgctcgcg ccaaagacgc tcgtcagacg catcgtgtta atccgaaccc
     3601 ggacatggaa ccttcgaatt gtcgcgactc ttgcggcgga tcagggcgct tttgcggcgc
     3661 ggtccgctcg cagagattca tacaacagcc caataactcc ggcaacgatg gccacatcgg
     3721 cgaagttaaa aacataccaa ttgaagcgcc aattgggcgt ggaaatgtga aaaaggacga
     3781 aatcggcgac ccaaccataa gccaatcgat cgatggcatt gcccaccgcc ccacccacaa
     3841 tcagaccgag agagagggcc gtgagtcggt cttttgcgtg cgccagccag atccaaagca
     3901 gcacgacagc gaccgcctta aacgcaagta aaacccactg accgagcggc ccctcggtct
     3961 ggaaaagccc gtagctgatc ccggtgttgc gcgcgagaat aatatcgatg aatgggccca
     4021 gccggaccgg gccattggcg gcgagatcga atacaaacag aaggtagagt ttactggcct
     4081 ggtcaatcgc acagacgatc gcagctacgg caaagccgaa gcctgtttgt ggaccggtga
     4141 gataagcttt cattaaaata gcaacgtttt tgtcatggcc ggacttatcc cgccatcgtg
     4201 atccatatcg cacgtccttg cccgactacg cgagatcgcc gagacaagcc cggtgttgcc
     4261 gaaatcttac tccgccgcct tgcgcatggt tttccattcg cgcagcgcct gagcatcccg
     4321 cggcgagaca tccggatact caggatcttc gccaatgttg gtgaggatct tccacgagcg
     4381 ggcgcatttt ctgccttcgg ccaggttgga tacgaccgct acgcctgcga cgtccggcag
     4441 acgaaacgcg ccggccggcc cttcatcctg gacaagagtc gcagccgagg tgatgcacac
     4501 ttcagcgaga tcgcaatcga ccaccgcttc atacaattcg ggattcgcga cgtgcacgat
     4561 cgggtgggcc tcgagcgaag aaccgatgcg tttctgggca cgctcgattt ccagcgcgcc
     4621 ggtgacaacg cggcgcacgg ttcggatctt gcgccactta tcggccaatc ggtcgttacg
     4681 ccacgccgcc ggaacgtcgg gaaagggttc caggtggaca gacttcgcgg cgttgccgta
     4741 acgcgagagc cacgcctctt cggcggtgaa gcaaagcatc ggtgccagcc acgtaaccgt
     4801 gcagcgaaac aggctatcaa gcaccgtcag gcaggctttt cgtttcaccg aggaatacgg
     4861 gtcgcaatag agcgtgtcct tgcgaatatc gaagtagaac gccgacaaat ccgacgtcat
     4921 gaagctcgat agcgcggcaa agatgcgctt gtagtcgaat tcggcgtacg ccttgcgcac
     4981 cagcccatcg agctcgaaaa gccgatgcag catcaggcgc tcgagctccg gcatcttttc
     5041 gagcttgacg cgatcctctt cgttgaaatg cgcgaggctg ccgagcatcc agcgcacggt
     5101 gttgcgcagc ttgcgatagg tctcgaccgt agtcttgagg atctccggtc cgatgcggag
     5161 atcgtccgca tagtccgagg cgcataccca catgcgaagg atgtcggcgc cggattgcct
     5221 gatcacgtcc tgcggcgcag tgacattgcc aagcgacttc gacatcttgc ggccctgctc
     5281 gtcgagcacg aagccgtgcg tcagcaccag gtcatagggt gcacgtccgc gcgtaccgca
     5341 gctttcaagc aaagaagaat ggaaccagcc acggtgctgg tcgctgcctt ccagatacat
     5401 cacggtatcc ttgccgccat ccagcctgcg ttcgatgccg gcaagcgtcg ggagttgctg
     5461 cgggtcctcc agcacaaacg cgtgtgtgca gcccgagtcg aaccagacgt cgagaatatc
     5521 gtcgatcttt ttccatgaat cgttcgcgag cctgcccagg aaacgctcgc gcgcgccggg
     5581 cttgtaccag gcatccgcgc cttcctgctc gaacacctcg acgatgcgca cttcaacgtc
     5641 cggatcctgc aggatctcga ccgagccgtc cggcttttcc ttgacgaaca aggcgatcgg
     5701 cacgccccag gcgcgctggc gtgaaatcac ccagtcgggt cgcgattcga tcatgccggt
     5761 gatgcggttc tcgccctgcg gcgggaccca gcgcgtgacc ttgattgccg agagcgcgcg
     5821 atggcgcaac gtgtccccct tcgtcgcgat gtccttgtcc atcgcgat
//
LOCUS       DATDHO010000736         2255 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_432558, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000736 DATDHO010000000
VERSION     DATDHO010000736.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2255
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432558"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..614
                     /locus_tag="VIY07_14205"
     CDS             <1..614
                     /locus_tag="VIY07_14205"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HEY6382945.1"
                     /translation="FLGYPVAGPDNDLRPGHRRYNVVWYRPADESTKLQWLLTDERGV
                     THAISIPPPLIRREAIAEMRADAEKLIAPQFRQIVRLIEEPILQPIYDLESPRMASGR
                     VAIVGDAAFVARPHVAAGVSKAADDAAALADALQKEAGVETALKRFEAARLAQNHRII
                     ERARHLGAYLQASRTHEEQARAGRHSTDAAVIAETAVLDFLYA"
     gene            746..961
                     /locus_tag="VIY07_14210"
     CDS             746..961
                     /locus_tag="VIY07_14210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009859447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dodecin family protein"
                     /protein_id="HEY6382946.1"
                     /translation="MPDSVYKIIELVGTSTESWEKAAKSAVDMAAKTLRDLRIAEIEK
                     LDVQLKDGKVEAYRVKMKVSFKFEGRA"
     gene            1097..1300
                     /locus_tag="VIY07_14215"
     CDS             1097..1300
                     /locus_tag="VIY07_14215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382947.1"
                     /translation="MSDEAKKRAEASDRAAECRERAAQYEALANEAKRRGDIEMSTNF
                     ACRAAEERIEARRIEQGIGKLGD"
     gene            complement(1338..1541)
                     /locus_tag="VIY07_14220"
     CDS             complement(1338..1541)
                     /locus_tag="VIY07_14220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014761212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEY6382948.1"
                     /translation="MDWNRVEGNWKQIKGKVKEKWGDLTDDDLDKIAGSRDQLEGKIQ
                     ERYGLAKDQVRKDVDDWMNAQRW"
     gene            1740..1967
                     /locus_tag="VIY07_14225"
     CDS             1740..1967
                     /locus_tag="VIY07_14225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382949.1"
                     /translation="MNERDQELLDKQLWGVSPSPPPRSGGLALAFVAAFFGGLLIGGI
                     LFPNKSNQVQVTTGDTPTALSLLDNSQATLR"
     gene            complement(1985..>2255)
                     /locus_tag="VIY07_14230"
     CDS             complement(1985..>2255)
                     /locus_tag="VIY07_14230"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6382950.1"
                     /translation="ARSDAHGDLPLPPTTYLRRNVYFDTVVFTPHQLEALVKTYGGDR
                     IVLGTDYPFDMLENDPIGHIASVESFDEKTRAALAGGNAKKMLRM"
BASE COUNT          465 a          644 c          676 g          470 t
ORIGIN      
        1 agtttctggg atatccggtc gcaggacctg acaatgattt gcgtcccggc catcgccgct
       61 acaacgtggt ctggtatagg ccagccgacg agtcgacgaa gttgcaatgg ctgctcaccg
      121 acgagcgcgg tgtcacgcac gcgatatcga ttcctccgcc cttgatccgt cgggaggcaa
      181 tcgccgaaat gcgcgccgat gcggaaaaat tgatagcgcc gcaattccgg caaatcgtgc
      241 ggctgatcga ggaaccgatc ctgcagccga tctacgatct ggaatcgccg cgcatggctt
      301 ctggccgggt tgcgatcgtg ggcgatgcag ctttcgtggc gaggccgcat gtggcggccg
      361 gcgtttcgaa ggccgcggac gatgcggctg cgctcgccga cgcactgcag aaggaagccg
      421 gcgtggaaac cgcgctcaag cgtttcgagg cagcgcggct ggcacaaaac catcgcatta
      481 tcgagcgcgc acggcatctg ggggcttatc tgcaggccag ccgtacgcat gaagaacagg
      541 cgcgcgcagg caggcacagc actgatgctg cagtgatcgc cgaaacggct gtgctggatt
      601 ttctgtacgc ctagcggcgg tgtgcacggt tgcttgactt gtggcgtttt aactcctcaa
      661 cttgtgtggc ctaaactgga tcaccagaac ggtcggtggt gagatactcc atactcggca
      721 tacaaaacgt tgcgaggagg accctatgcc tgactccgtt tacaagatta ttgaattggt
      781 cggcaccagt acggaatcgt gggagaaagc cgcaaaatct gcggtcgaca tggccgccaa
      841 gaccctgagg gatcttcgga ttgcggagat cgagaagctg gatgtgcagc tcaaggatgg
      901 aaaagtcgag gcctatcgcg tgaagatgaa ggtttcattc aagtttgagg gcagggccta
      961 attccgcgtg tagccctggc ggatgactcc gccctggggc tgagcggaga agctcgcgcc
     1021 tgctaatccg ttgtcctcaa tctcgtctgt ggaccgctgc cgggctaagc tgggttgcgg
     1081 acacggagct acgctcatga gcgacgaggc aaaaaagcgc gccgaagcgt ccgaccgggc
     1141 ggccgaatgt cgggaacgag cagcccaata cgaggctctt gcgaatgagg ccaagcggcg
     1201 cggcgacatt gaaatgagca cgaacttcgc ctgcagagcg gcggaggagc gcatcgaggc
     1261 gcgccgcatc gaacagggca tcggcaagct tggcgactag gcgccaagct tgcacaattt
     1321 cattcgatgt ttcggtatca ccacctctgc gcattcatcc aatcgtcgac atcttttctg
     1381 acttgatctt tcgccaggcc ataacgctcc tgaatttttc cctcgagttg atcgcgactg
     1441 cccgcgatct tatccagatc atcgtcggta agatctcccc atttctcttt caccttgccc
     1501 ttgatctgct tccagttccc ttccactcga ttccagtcca tcgcatacct ccaatgacat
     1561 cggaacacgc gcgtgatcgc accatgtgct tgacaattca gcgccatcgg gagggttcca
     1621 gccagcgcgg caatcagcca ccaatccgcg atgcgtaatt tcggttgaac tcgatgtgtt
     1681 ctttgagcgg aactggacgc gccgtcgatg aattatgtca attgataaag gccagagcca
     1741 tgaacgaacg cgaccaggaa ctcttggaca agcagctgtg gggagtgagt cccagtcccc
     1801 cgccgcgtag cggaggcctg gctttggcgt ttgttgcggc cttcttcggc ggactgctga
     1861 ttggcggaat tttgtttcca aacaaaagca atcaggtgca agtgacgacg ggagacacgc
     1921 ctaccgcgct ttcgctcctc gataattcgc aggccaccct gcgatagcct gcaccccgcg
     1981 ccattcacat tcgtagcatc ttcttcgcat tgccgccggc gagcgcggcg cgcgtttttt
     2041 catcgaagct ttcgacggac gcgatgtgcc cgatcggatc gttttccagc atgtcgaacg
     2101 ggtagtccgt gccaagcacg atgcgatcgc cgccataggt cttcaccagt gcttcaagct
     2161 ggtgaggggt gaagacgacg gtatcgaaat agacgttccg tcgcaggtac gtcgtcggcg
     2221 gaagcggcag gtcgccgtgc gcatccgatc gcgcg
//
LOCUS       DATDHO010000737         2726 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_284703, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000737 DATDHO010000000
VERSION     DATDHO010000737.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284703"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..598
                     /locus_tag="VIY07_14235"
     CDS             <1..598
                     /locus_tag="VIY07_14235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEY6382951.1"
                     /translation="IAIVHRSDGSGTTYNFAYYLAEVSSDWKTKVGVNTSVQWPSGIG
                     AKGNEGVANNVGNTKGSIGYVEYAYAKQNKLTFTKMINKAGKAVTPTAETFQAAAASA
                     DWKSQPGYGVILANQAGEKSWPMTAATWILIYKQPADAAATGEALKFFAWAYKNGDKM
                     ADELDYVPMPDNVVKDVEKYWADGIKDASGKPLFAMTN"
     gene            760..1746
                     /gene="pstC"
                     /locus_tag="VIY07_14240"
     CDS             760..1746
                     /gene="pstC"
                     /locus_tag="VIY07_14240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEY6382952.1"
                     /translation="MALQGTGSSAVSQVDRAKVLQRLRLGDVAFRHLTRAAALLVLVI
                     LGGIIVSLIWGSLPALRTFGLSFLYEEAWNPVTEKFGAIAPIYGTVVTSLIAMLIAVP
                     VGLFIALFLTELCPMWLRRPIGIAIELLAGIPSIIYGIWGLFVFAPFLQQNVQPFLIS
                     LFGDIPVLSTLFAGPPYGIGIFTAGLILAIMVLPFITSISRDVFEAVPPVLKEAAYGL
                     GCTTWEVARYVMLPYARVGVIGGIMLGLGRALGETMAVTFVIGNAHRISGSLLAPGTT
                     ISATIANEFTEAVGDLYTSALIALGLILFLITFIVLAIARLLLLRLNARVGG"
     gene            1749..2600
                     /gene="pstA"
                     /locus_tag="VIY07_14245"
     CDS             1749..2600
                     /gene="pstA"
                     /locus_tag="VIY07_14245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013892653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015415 - ATPase-coupled phosphate ion
                     transmembrane transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEY6382953.1"
                     /translation="MISSSPLYAKRRRRNAVTMALAYGATGLGLSWLVVILAVLVWEG
                     VSGLSLAVFTEMTPPPGSAGGLLNPIAGSLVMTVIAVLIGTPLGILAGTYMAEYGRFD
                     KLTTVVRFINDILLSAPSIVIGLFIYEVMVAQMGHFSGWAGAVSLAVIVVPVVVRTTE
                     DMLLLVPDSLREAAASIGLPRSLMIQRVAYRAARAGMITGVLLAVARISGETAPLLFT
                     ALNNQFWSLNLNAPVSSLPVVIFQFALSPYKDWQSLAWTGALIITFAVLFLSIVARIL
                     AAQRKTS"
BASE COUNT          493 a          790 c          811 g          632 t
ORIGIN      
        1 gatcgcaatc gtacatcggt cagacggttc aggaacgacg tacaactttg cctattacct
       61 cgccgaagta agttctgact ggaagacgaa agtgggcgtg aacacgtcgg tgcaatggcc
      121 cagcggcatt ggcgccaagg gcaacgaggg cgttgcgaat aatgtcggca acaccaaggg
      181 ctcgatcggt tacgtcgaat acgcttatgc caagcagaac aagttgacgt tcaccaaaat
      241 gatcaacaag gccggaaagg cggtgacgcc gaccgcggaa acgttccagg cagccgcagc
      301 gagtgccgac tggaaatcgc agcccggcta cggcgtcatc cttgcaaatc aagcaggcga
      361 aaagtcatgg ccaatgacag cggccacctg gattctcatt tataagcagc cggcggatgc
      421 ggcggctacg ggcgaggcgc tcaagttctt tgcctgggcg tacaagaacg gcgacaagat
      481 ggcggacgaa ctcgactatg ttccgatgcc cgataatgtc gtcaaggacg ttgagaagta
      541 ctgggctgat ggaatcaagg acgcgagcgg caagcccctt ttcgcgatga ccaattgatc
      601 cagtcgttca tggggagggc gccaaccggc gccctttcct ctttccgcgg ccggcagagg
      661 gacggcttgt gtcggggcct gcagaccgct tgactactct ccatagccac gaaggcgagg
      721 gagagccgga tgcaatcggg gaggcagccc gtggttgacg tggcgttgca gggtacgggt
      781 agttcggctg tcagccaggt cgatcgcgcg aaggtcctgc aacgtttgcg cctgggcgat
      841 gtggcattcc gacatctcac ccgcgccgcc gctctgcttg tgctcgtcat tctcggcggc
      901 atcattgtgt cgctgatatg gggttcgttg ccggcgctgc gcactttcgg cctcagtttt
      961 ctttacgaag aggcctggaa tccggttacc gagaaattcg gcgccatcgc accgatctac
     1021 ggcaccgtgg tgacctcgtt aattgccatg ctgattgccg tgcctgtcgg gttgttcatt
     1081 gcactgttcc tgactgaatt gtgcccaatg tggcttcgtc gccccatcgg catagcgatc
     1141 gaattgctgg cgggcattcc cagcatcatc tatggcatct ggggtttgtt cgtgttcgcg
     1201 ccgtttcttc agcagaacgt gcagcccttc cttatcagcc tgttcggcga catcccggtg
     1261 ctctcgacgc tgtttgcggg ccctccttat ggcatcggaa ttttcactgc cggcctcatt
     1321 cttgcgatca tggtgctgcc gttcatcacg tcgatttcgc gcgacgtgtt cgaggccgtg
     1381 ccgcccgtgc tgaaagaggc cgcctacgga ctcggttgca ccacctggga agtcgcgcgc
     1441 tacgttatgc tgccttacgc ccgcgttggc gtgatcggcg gcatcatgct cggcctcggc
     1501 cgcgcactcg gcgagacgat ggcggtcacc ttcgtgatcg gcaacgcgca tcggatttcg
     1561 ggttcgctcc tggcccccgg cacgaccatt tcggcgacca tagccaatga attcacggaa
     1621 gctgtcggcg acctctatac ttcggctttg attgcgcttg ggcttattct cttcctcatt
     1681 accttcatag ttctcgccat tgcgcggctg ttgttgctgc gtttgaacgc gcgggtagga
     1741 gggtgacaat gatttcatcc tccccactct acgccaagcg ccgccgccgc aatgcggtca
     1801 ccatggctct tgcctatggt gcgaccggat tgggcttgag ctggctggtc gttatcctgg
     1861 cggtgctggt ctgggaaggt gtcagcggtt tgtcgttggc cgtattcacc gaaatgacgc
     1921 caccgccggg gtccgcaggc ggtttgctca acccgatcgc cggcagcctg gtgatgacgg
     1981 tgattgcagt gttgattggc acgccgctcg gcatcctcgc cggcacctac atggctgaat
     2041 atgggcgctt cgacaaatta accaccgtcg tgcgtttcat caatgacatc ctgctcagcg
     2101 cgccatcgat cgtgatcgga ctattcatct atgaggtcat ggttgcgcag atgggccatt
     2161 tttccggttg ggccggcgcg gtgtcgctcg cagtgattgt tgtgcccgtg gtcgtgcgca
     2221 ccactgaaga catgttgcta ttggtgccgg acagcttgcg tgaggcggca gcgtctatcg
     2281 gccttccgcg ctctttgatg atccaacggg tcgcctatcg cgccgcgcgt gcaggaatga
     2341 tcacaggcgt cctgttggca gttgcgcgca tttcgggcga aacggcaccg ctcctgttta
     2401 ccgcacttaa caaccagttc tggagcctca acctgaatgc gccggtttcc agcctgccgg
     2461 tcgtcatctt ccagttcgct ctgagccctt acaaggactg gcagagcctt gcgtggactg
     2521 gagcgttgat catcactttc gcggtgcttt tcttgagcat cgtcgcccgc atcctagctg
     2581 cccagagaaa aacgtcatga ccgtagcagc cattactgtg ccgaccgtca cccacgcgtt
     2641 gtcccaagat gagaaccttg tagaaaaggt cttggtcagg aacctggatt tcttctatgg
     2701 cgaccatcgt gccttgaaga gcatca
//
LOCUS       DATDHO010000738         5196 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_432687, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000738 DATDHO010000000
VERSION     DATDHO010000738.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5196
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432687"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..286
                     /locus_tag="VIY07_14250"
     CDS             <1..286
                     /locus_tag="VIY07_14250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382954.1"
                     /translation="KRLESSGKVVLNTGTWLKLLSRMPVRFGRLPAVYRPSYRLNYFE
                     IEEMDRQLVIKYVTIPKMPEQELTWLQRLLTLGKKPVQPEEIPAKTVIDL"
     gene            539..1801
                     /locus_tag="VIY07_14255"
     CDS             539..1801
                     /locus_tag="VIY07_14255"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY6382955.1"
                     /translation="MSDLVHLKIWGDSAIREGLSWYLDVAENRRPAKFRIAATLATQI
                     DPVASSEDALWAELERLTPIFLERWQTIRAGAPLQDMAEGPSLLELCRELAYRMLAHC
                     NFCPWNCRVDRSAGAKFGACKLASASRVSSHFHHTGEELFYRGTEGSGTIFFTSCNMR
                     CAFCQNGDISADKDNGEETDPRTLAAMAWTLRREGCHNINWVGGEVVIHLHAIVDAIA
                     LLGRDFAPTPVELRRARRTKADRFFWFDEMPDKAVYAGKFNAPMLWNSNFFMTLESMK
                     ILHVLADVWLPDFKFGPGRCAMALAKTPWYWETVTRNLALIAEWGEDFSIRHLVMPNH
                     VECCTYPVLEWIAEHVPAAPVNVMAQFHPDNFCDPASTKYRDKYAEIARRPSSTELND
                     SWRRACELGLKFETTTFERRNLLDMLEM"
     gene            1821..3350
                     /locus_tag="VIY07_14260"
     CDS             1821..3350
                     /locus_tag="VIY07_14260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY6382956.1"
                     /translation="MARSSNLAQETASILQHLGVDRRAFQEGARIVRSPTTGGTIATV
                     QDADAAAIGKVIDNAVHAFMSWRLVPAPRRGELVRLLGEELRAAKDDLGRLVMIEAGK
                     IASEGRGEVQEMIDICDFAVGLSRQLYGLTIASERPAHRMMEQWHPLGPIGVITTFNF
                     PVAVWAWNAALALVCGDAVIWKPSEKTPLTALAVQALVARTLEKFGDAPQGLSAVLIG
                     DRDAATRLTDDPRVPLVSATGSTRMGHTVGPRLAQRFARAILELGGNNAAVVCPSADL
                     ELALRAIAFAAIGTAGQRCTTLRRLFIHRHVYGALVARLTQVYATTRVGNPLEDDSVL
                     IGPLIDEAAFAAMQATLSDVQALGGKITGGDRCHAERYPAAYYVRPALIEMADQTGPV
                     LRETFAPLLYVMPYTDFDQVIELHNGVPQGLASSIFSNDVREVEHFLSAAGSDCGIVN
                     VNIGPSGAEIGGAFGGEKETGGGREAGSDAWKTYMRRVTSTINFGSELPLAQGVRFDI
                     G"
     gene            complement(3347..4612)
                     /gene="rocD"
                     /locus_tag="VIY07_14265"
     CDS             complement(3347..4612)
                     /gene="rocD"
                     /locus_tag="VIY07_14265"
                     /EC_number="2.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004587 - ornithine aminotransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HEY6382957.1"
                     /translation="MAELNSLESRYGAANYKPLPVTLVRGEGVHVWDEDGRRYLDMMG
                     AYSAVSFGHCHPNLVKAMTRQARRLDTVSRAYFTDRLGPFLARACALTGMDAALPANG
                     GAEAVETALKAVRKWAYKVKGVPAERAEIIAAEGNFHGRTIAIVGFSSVPQYRNGFGP
                     FPAGFKLVPFGDAAALEAAITPYTAAFLIEPIQGEGGINVPPAGYLAQAARICRARNV
                     LLICDEIQTGLGRTGRLLACEHDGVRPDGVTLGKALGGGLIPVSLFLARREIMDVFEP
                     GDHGSTFGGNPIAAAVGLAALDTLVQERLVERAAALGPHLLSRLAGIKNPLVREVRGR
                     GLFAGIELDAKKIQASVVVERLLRVGILTKETHRNTIRLAPPFIIKKSEIDWAVDRIA
                     QVLGEIVRDITEPFDRTSKGNGLLHGHPA"
     gene            complement(4713..4883)
                     /locus_tag="VIY07_14270"
     CDS             complement(4713..4883)
                     /locus_tag="VIY07_14270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382958.1"
                     /translation="MKAVTENLAFPESYVVEIDGKIESVHRIYIEALKAGMELKQKFA
                     HSHIKVHEAVER"
BASE COUNT         1046 a         1540 c         1546 g         1064 t
ORIGIN      
        1 gaagcgactt gaatcgtcgg gcaaagttgt tctcaacact ggaacatggt tgaagctatt
       61 aagccgcatg cccgttcgtt tcggtcgatt gcccgctgtc taccgtccct cttatcgact
      121 gaactacttt gaaattgaag agatggaccg ccaattggtc atcaagtacg tcaccattcc
      181 gaagatgcct gagcaagaac tgacatggct acagcgcctg ctgaccttag gtaagaagcc
      241 tgtgcaacct gaagaaatcc cagcgaaaac agttattgac ctgtaatcag attatttgct
      301 tccccgctca cgggaaacgg gttgcgtttt gggagctcat aaaatcgctg cgttgaacac
      361 gcgattgatg tccgctttcg ggggaaagca gacatggcga aatgctgata atgacccaaa
      421 gcggacatag cgcgatcgtc cgtactttca taaaattggg catcgtcgtg accgcccgtc
      481 aggagacaca aagcctaatt ataagagggt gtagcgtttg gcggcaggga gccgtctcat
      541 gagcgacttg gtgcatttga aaatttgggg cgactcggcg atccgcgagg gcctttcctg
      601 gtacctggac gtggcggaga accggcggcc ggccaaattt cgtattgcgg cgacgcttgc
      661 tacacagatc gaccccgtag catccagtga ggacgcgctc tgggccgagc tcgagcgcct
      721 gaccccgata tttcttgaac gctggcagac gatccgggcg ggcgcgccat tgcaggacat
      781 ggcggagggg ccgagcctgc tggagctgtg tcgtgagctc gcttaccgca tgctcgctca
      841 ctgcaatttc tgtccgtgga attgccgtgt cgaccgctct gcgggcgcca agttcggcgc
      901 ctgcaagctc gcctcggctt cgcgggtcag ctcgcatttc catcacaccg gcgaggagct
      961 gttctaccgt ggcacggaag gctcgggcac gatcttcttc acctcctgta atatgcggtg
     1021 tgcgttttgc cagaacggcg acatcagcgc cgacaaggac aacggcgaag agacggaccc
     1081 gcgcacgctc gcggcgatgg cgtggacgct gcgccgcgaa ggttgccaca acatcaactg
     1141 ggtgggcggc gaggtggtta tccacctgca tgccatcgtc gatgcgatcg cgctgttggg
     1201 tcgcgatttc gcgccgacgc cggtagagct taggcgggcg cgaagaacca aagctgaccg
     1261 tttcttctgg ttcgacgaga tgcccgacaa agccgtctat gcggggaagt tcaatgcgcc
     1321 gatgctgtgg aatagcaact tcttcatgac gctcgaaagc atgaaaatcc tgcacgtgct
     1381 tgccgacgtc tggctgcccg acttcaaatt cggaccgggc aggtgcgcga tggcgctggc
     1441 aaagacccct tggtactggg agacagtgac cagaaacctt gcactcatcg ccgaatgggg
     1501 tgaggatttt tcgatccgcc acttggtgat gcccaatcat gtcgaatgct gcacctatcc
     1561 ggtgttggaa tggattgccg agcacgtacc tgcggcgccg gtgaatgtga tggcgcagtt
     1621 ccatcccgac aatttctgcg atccggcaag caccaagtac cgggacaaat acgccgagat
     1681 cgcgcgccgc ccgtcatcca cagaactgaa tgactcctgg cgccgtgcgt gcgaattggg
     1741 cctgaagttc gagaccacga cgttcgagcg ccgcaatctt ttggacatgc tcgaaatgtg
     1801 atgacccgga gtagttccct ttggctcgat catcaaatct cgctcaggaa accgcttcga
     1861 tccttcagca ccttggcgtc gatcgccgtg cgtttcagga aggagcccgg atcgtacgtt
     1921 cgccgacgac cggcggaacg attgccaccg tgcaggacgc tgacgcggcg gcgattggca
     1981 aagtcataga taatgcggtg cacgcgttta tgagctggcg cttggttcca gccccgcgcc
     2041 gcggcgaact cgtccggctc ctgggcgagg agttgcgcgc cgccaaggac gatctgggtc
     2101 gcctggtgat gatagaggcc ggcaagatcg cttccgaagg ccgcggcgaa gtgcaggaga
     2161 tgattgatat ctgcgatttc gcggtcggtc tttcccgcca actctatggc ctgaccattg
     2221 ccagcgagcg tcctgcgcat cgcatgatgg agcaatggca tcccttaggt ccgatcggag
     2281 tgatcaccac attcaatttt ccggtggcag tgtgggcctg gaatgcagcg ctcgcgcttg
     2341 tctgcggcga tgccgttatt tggaagccat ctgagaaaac gccactgacg gcactcgccg
     2401 tccaggcact ggttgcgcgg acgctggaaa agtttggcga tgctccgcaa ggcttgtcgg
     2461 cggtactcat cggcgaccgc gacgctgcga ccaggctgac cgacgatcca cgcgtgccgc
     2521 tcgtatcggc gaccggatca acgcgcatgg gccacaccgt cggcccgcgg ctggcgcaac
     2581 gcttcgcgcg agcgattctc gagctcggcg gcaacaatgc ggccgtggtc tgtccctcgg
     2641 ccgacctcga attggcgctg cgcgcgattg cctttgcggc catcgggacc gcagggcagc
     2701 gctgcaccac gcttcgccgg ctatttatac accgtcatgt gtacggagcg ctcgtcgcgc
     2761 ggctgacgca agtgtatgcg acaacgcgcg tcggcaatcc gcttgaagac gattctgtcc
     2821 tgatcgggcc gctgatcgac gaagcggctt tcgccgcgat gcaagcgaca ttgtcggacg
     2881 tgcaagcgct gggcggaaaa atcaccggcg gcgaccgctg ccatgccgaa cgctatccgg
     2941 ctgcctatta cgtgcgcccg gccttgatcg agatggcaga ccagacgggg cccgttttgc
     3001 gcgaaacttt tgcgccccta ctttacgtga tgccgtatac cgacttcgac caggtgatcg
     3061 aactgcacaa cggtgtgccc caaggcctcg cttcgtcgat cttttccaac gatgtgcgcg
     3121 aggtcgagca ttttctgtcg gcggcaggat cggactgcgg gattgtcaac gtcaatattg
     3181 gtccgtcagg cgccgagatt ggcggtgcct ttggcggcga gaaggagacg ggcggtggcc
     3241 gtgaagctgg ttcggacgcc tggaagacct acatgcgccg cgtcaccagc accatcaatt
     3301 tcggcagcga gcttccgctc gcccaagggg ttcgtttcga catcggctag gcaggatgcc
     3361 catgcagcaa gccattaccc ttcgatgtgc ggtcgaacgg ctcagtgata tctctaacga
     3421 tctcgccaag cacttgcgcg attcgatcga ccgcccaatc aatttccgat ttcttgatga
     3481 tgaacggtgg cgccaggcga atggtgttcc tgtgggtttc cttggtcaag attccgacgc
     3541 gcaacagccg ttcaacgact acacttgcct ggatcttctt cgcatcgagt tctatgccag
     3601 cgaaaagccc gcggccgcgc acttcgcgca cgagcggatt tttgatccca gcaagccgcg
     3661 acagcaggtg cgggccgagc gccgcggccc tctccaccaa ccgttcctgt acgagggtat
     3721 cgagcgcggc tagtccgacc gcggcggcaa tcgggttgcc gccgaacgtg ctgccgtgat
     3781 cgcccggctc gaatacatcc atgatctcgc ggcgggcaag gaagagcgac accggaatga
     3841 gcccgccgcc cagcgccttg ccgagagtaa cgccgtcggg cctcaccccg tcgtgctcgc
     3901 acgcaagcaa acggccggtg cggccaagcc cggtctggat ctcgtcgcag atcagaagca
     3961 cgtttcgggc acggcagatc cgcgcggcct gcgccaggta gccggcgggc ggcacgttga
     4021 tcccgccttc accctggatc ggctcgatca ggaatgcggc tgtgtaggga gtgatagcgg
     4081 cctcgagcgc ggcggcgtcg ccaaaaggca cgagcttgaa tcccgcaggg aacggaccaa
     4141 agccgttgcg atattgcggc acggacgaga agcccacaat ggcgatggtg cggccgtgga
     4201 aattgccttc cgccgcgatg atctcggcgc gttcggccgg cacgcccttg accttgtagg
     4261 cccatttgcg caccgccttg agcgcagtct cgaccgcctc ggcacctcca tttgccggca
     4321 gtgcggcgtc catgccggta agtgcgcagg cacgcgccag aaacggcccg agccgatcgg
     4381 tgaaataggc gcgagagaca gtgtccagcc gtcgcgcctg tcgcgtcatc gctttgacca
     4441 agttcggatg gcaatgtccg aaactgacgg ccgagtaggc gcccatcatg tcgagatagc
     4501 ggcgaccatc ctcgtcccaa acatggacgc cttcgcctcg cacaagggta acgggcagcg
     4561 gcttataatt cgccgcgcca taacgggatt cgagactgtt caactcggcc attgcagcct
     4621 ctcctcgctg accgtcgcgg cgatcagaac gccgcgctgt ccggcccgcc caatttcgat
     4681 gttgtcgaac tttcgcatgc gctaactgaa cctcatcttt cgactgcctc atgcactttg
     4741 atatggctat gagcaaattt ttgcttcaac tccatgcccg cttttaacgc ctcaatataa
     4801 attcgatgta ccgattcaat ttttccatcg atttcgacta cataggattc aggaaaagca
     4861 aggttttcgg ttacggcttt catgagcggc ctccgcaaca ccaaaactat ttgaatgatc
     4921 gagttaatga ttgcttaaat caggttaatt tttgcttaat tgcgcgcaac tcttcggctc
     4981 caaaaaaatg gatccccgct tgcgcgggga tgaacggggt agatgaaaag tcgagcaaaa
     5041 attccgcgcg tccccgccgg caagcgggac cccagtgcaa gacgaaaatc aatcacggat
     5101 tgctctgacc gtgtcacctg ttcaggcaaa tcaatgcgct ccggctttcg ccgctggttt
     5161 gtcaaacacc atcaccttgg aaacaaaggc attgac
//
LOCUS       DATDHO010000739         3078 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_233821, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000739 DATDHO010000000
VERSION     DATDHO010000739.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3078)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3078)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3078
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_233821"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1483)
                     /gene="cimA"
                     /locus_tag="VIY07_14275"
     CDS             complement(<1..1483)
                     /gene="cimA"
                     /locus_tag="VIY07_14275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HEY6382959.1"
                     /translation="MARERVYLFDTTLRDGAQTNGVDFTLADKLAIAGMLDELGIDYV
                     EGGYPGANPTDTELFGKDRNLDTVFTAFGMTRRPGRSTSNDTGLAALLDAKADAICFV
                     AKSWDYHVKVALETTNEENLASIRDSVRAAKAKGREVLLDCEHFFDGYKANPKYAMAC
                     AKAAYEEGARWVVLCDTNGGTLPDEVEKIVGEVVKVIPGDHVGIHAHNDTEQAVANSF
                     AAVRAGARQIQGTLNGLGERCGNANLVSIIPTLKLKPEFAERFDIGVTEGALKKLAHV
                     SRALDERLNRAPNRHAPYVGESAFATKAGIHASAIKKDPTTYEHVAPELIGNRRKVLV
                     SEQAGKSNILAELDRVGIKVDKDHARIGRLLEIVKEREAIGYAYESADASFELLARRT
                     LGKVPNYFDVTQFDVNVEQRINAKGERVTVTMAVVKVKVGDDNLISAAEGNGPVNALD
                     LALRKDLGKYQKYIAGLKLTDYRVRILNGGTEAVTRVLIESEDE"
     gene            complement(1604..2110)
                     /locus_tag="VIY07_14280"
     CDS             complement(1604..2110)
                     /locus_tag="VIY07_14280"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6382960.1"
                     /translation="MTATAHPRLGLRPFLPADAPLLREIFRDSIEELTADDYTEAQQE
                     AWVAGADDVGDFGRKLSGQLTLVATLEGSPVGFASLQGKDKIDMLYVHPAATGQGVGA
                     MLVDALEKLAGARGATRLAVDASDSARGFFEKRGYVAQQRNSVSIGDEWLANTTLHKQ
                     LAAKREVS"
     gene            complement(2107..2580)
                     /locus_tag="VIY07_14285"
     CDS             complement(2107..2580)
                     /locus_tag="VIY07_14285"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY6382961.1"
                     /translation="MNATFHSGGCQCGAIRFRASRFGRSSICHCRMCQKAFGGFFGAL
                     VTAHDLEWTRGSPRRFASSNKAQRGFCGDCGTPLTFEPGGPVEIAVGTFDDPSVVAPT
                     IQVNPADKVPFFDGLCGLPTRKDGAEPDAETFKASVVTFQHPDHDTAQWPLGGRS"
     gene            complement(2577..>3078)
                     /locus_tag="VIY07_14290"
     CDS             complement(2577..>3078)
                     /locus_tag="VIY07_14290"
                     /inference="COORDINATES: protein motif:HMM:NF020752.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DALR domain-containing protein"
                     /protein_id="HEY6382962.1"
                     /translation="DWPGEAVRFTMLQTHYRQPINWTIAGLKESQKNLDHWYELTAQA
                     KPGYLCSEAVDALLDDLNTPKAFAALHELRAEAAKGAGPAAACLKASAQLFGLLQWPA
                     AKWASFRPASISIDERKVQSLIEARAAARAAKNFKESDRIRDELAAMGVVVKDSKDGT
                     TWEIAR"
BASE COUNT          596 a          957 c          874 g          651 t
ORIGIN      
        1 gctcgtcctc gctttcgatc agcacgcgcg tcaccgcctc agtgccgccg ttgaggatac
       61 gcacgcgata gtcggtcaat ttcagcccgg cgatatattt ctggtatttg ccaagatcct
      121 tgcgcagcgc gagatccaga gcattgacgg gaccattgcc ctccgcggcc gaaattaagt
      181 tgtcgtcgcc gaccttgacc ttcacgacag ccatggtgac ggtgacgcgc tcgcctttcg
      241 cgttgatgcg ctgctcgaca ttcacgtcaa actgcgtgac atcgaaatag ttaggaacct
      301 ttccgagggt acgccgggcc agcagctcga aggaggcatc ggcggactcg taagcatagc
      361 cgatggcttc gcgctccttg acgatctcaa gcaagcggcc gatgcgtgca tggtccttgt
      421 cgaccttgat gccgactcga tcaagctctg cgagaatgtt ggatttgccg gcttgttccg
      481 agaccagaac ttttcggcga ttgccgatca gctctggcgc gacgtgctcg tatgtcgtcg
      541 gatctttctt gatcgccgat gcgtgaatgc cggctttggt agcgaaagca ctctcgccaa
      601 catacggagc gtgccggttc ggcgcgcgat taagccgctc gtccagcgcg cgcgatacat
      661 gagccagctt tttgagcgct ccttccgtga cgccgatgtc gaaccgttcc gcaaattccg
      721 gcttgagctt tagggtggga atgatggaaa cgagattggc atttccacag cgctcaccaa
      781 gcccgttaag cgttccctgg atctgccgcg cgccggcgcg caccgctgca aacgaattgg
      841 cgaccgcctg ctccgtgtcg ttgtgcgcat ggatccccac gtgatcgccg ggaatcactt
      901 tgaccacttc gccaacgatc ttttccacct cgtcaggcag ggtgccaccg tttgtatcgc
      961 agagcaccac ccagcgcgcg ccttcttcat aggccgcctt ggcgcaagcc atcgcatatt
     1021 tgggattggc cttgtagccg tcgaagaagt gttcgcagtc gagcagcact tccctgccct
     1081 ttgccttcgc ggcgcgcaca ctgtcgcgga ttgacgcgag attttcctcg ttcgtcgttt
     1141 cgagagcgac cttgacgtgg tagtcccacg atttcgcaac gaaacagatg gcatcagctt
     1201 ttgcatcaag cagggcggca agaccggtat cgttggatgt cgatcggccc ggccggcgcg
     1261 tcatgccgaa cgccgtaaaa accgtgtcaa ggttgcgatc tttgccgaac agttccgtat
     1321 cggtcggatt tgcgcccgga tagccgcctt caacgtaatc gatccccagt tcgtcgagca
     1381 tgcccgcgat ggccagcttg tcagccagcg tgaaatcgac gccatttgtc tgggcgccgt
     1441 cgcgcagggt cgtgtcgaag agatacacgc gttcgcgggc catggtgtcc tcacgccagt
     1501 cggtagacga catacagggc gatcaagacg gcggcggcca gcaccccata tttgagcacg
     1561 atgtagtaca gccaatgacg cggaaacggc gtgtcgggtc tggtcatgaa acctcccgtt
     1621 tggcggcaag ctgcttgtgc agcgtcgtgt tggcgagcca ttcatctccg atcgaaaccg
     1681 aatttcgctg ttgagcaacg tagccgcgct tttcaaagaa gccgcgcgcg ctatcgctcg
     1741 catcgaccgc aagtctcgtc gcgccccgcg cgccggcgag tttttccaat gcatcgacga
     1801 gcattgcccc aacgccctgc ccggtggccg cgggatgaac atagagcatg tcaatcttgt
     1861 ccttgccttg cagtgacgca aagccgactg gcgaaccttc cagcgttgcc accagcgtca
     1921 actgcccgga aagcttcctg ccgaaatccc cgacatcgtc cgcgccggca acccacgcct
     1981 cctgctgtgc ttccgtatag tcgtcggctg ttaattcttc gatgctgtcg cgaaaaattt
     2041 cacgcaacaa cggcgcatcc gccggcagaa acgggcgcaa gcctagcctt ggatgcgcgg
     2101 tggccgtcat gatcgacccc ccaatggcca ttgggcagta tcgtgatcgg ggtgttggaa
     2161 ggtcacgacc gaggccttga aggtctcagc gtcgggctcg gcaccgtcct tgcgggtcgg
     2221 caatccgcaa agtccatcaa aaaaaggaac cttgtccgcc ggattgacct gaattgtcgg
     2281 cgcaacaacg ctgggatcgt caaacgtccc caccgcgatc tcgactggcc cgccgggttc
     2341 gaaagtcaaa ggcgtaccgc agtcgccaca gaatcctcgc tgcgccttgt tggagcttgc
     2401 gaaacgacga gggctgccgc gcgtccactc gaggtcatgc gcggtcacca gggctccgaa
     2461 aaaccctccg aaggcctttt gacacatgcg acagtggcaa atcgacgagc ggccaaaccg
     2521 agaggcgcga aaacggatcg ccccgcactg gcacccgccg gagtggaagg tggcgttcat
     2581 cgcgcaatct cccaggtggt gccgtccttt gaatctttta ccaccacacc catggcggca
     2641 agctcatcgc ggatgcggtc agattccttg aagttttttg cggcgcgggc cgcggccctc
     2701 gcctcaatca gactttgaac ttttctttcg tcgatagaga ttgatgccgg gcggaacgaa
     2761 gcccatttag ccgcgggcca ttgaagcagt ccgaacaatt gcgcgctcgc cttcaaacag
     2821 gccgccgccg gccccgcgcc cttcgcggcc tccgcgcgca attcgtgcaa tgctgcaaaa
     2881 gcctttggcg tgttgagatc gtctagcaat gcatcgaccg cctcggagca caaatacccc
     2941 ggctttgcct gcgcagtcag ctcataccag tgatcgagat ttttttgcga ttccttaagg
     3001 ccggcaattg tccaattgat cggctgccga tagtgcgttt gcagcatcgt gaaacgcacg
     3061 gcctcacctg gccaatcc
//
LOCUS       DATDHO010000740         2142 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_334002, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000740 DATDHO010000000
VERSION     DATDHO010000740.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2142
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334002"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..888)
                     /locus_tag="VIY07_14295"
     CDS             complement(<1..888)
                     /locus_tag="VIY07_14295"
                     /inference="COORDINATES: protein motif:HMM:NF014893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6382963.1"
                     /translation="MPRPVTFLPMINAAVIGLGRWGKNIVEAVQGKSKRLCFIRGVSK
                     EPELVREFAAAKGFELSTEFEEAVTDPRVQAIFLATPHSLHVPQICAVAAAGKPVWCE
                     KPLALRRAEAESAIAACAKAGVPFALGNNKRCFPSMRELKRTVADGLLGEILHVEGNF
                     SNEHSTRVKGGWRDDPRESPGGGMTGAGLHVLDAFVNLAGPIVKVDARVYSQKPPPDP
                     RDAAAALVQFRSGATGVLGTVRAAPMFWRIHVFGTRGSAEARDETSLTLSLIGGSPET
                     KTYPAADSLGLLLEAFVETI"
     gene            963..1340
                     /locus_tag="VIY07_14300"
     CDS             963..1340
                     /locus_tag="VIY07_14300"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY6382964.1"
                     /translation="MDDKELYERGLKLRVDMFGRDAVEKRMNAFGDFGKPLQHIINAY
                     AYGDVWQRSALPPAVKSLAMVAMMAATGHQNELRVHLKGAVKNGCTAEQIQEVLLLLA
                     LYCGIPAANEAHRIAAEVLHESN"
     gene            complement(1344..>2142)
                     /locus_tag="VIY07_14305"
     CDS             complement(1344..>2142)
                     /locus_tag="VIY07_14305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382965.1"
                     /translation="GKVISVTAMPASYLPQLFVLKLPEIMLALGLAGTMGALVAAARP
                     DLPPNRRAAFLLVSLAAILPVVVAIVAHPAFYNGLRHFVFVVPPFAVLGGLAGGWLFE
                     RAGVLGRSATAVLVAVFIGGLALPVSDMIRLHPYQYTAFNWVSGGVRMAQHNYMLDYW
                     GLAFKQAGEGLRAKLNDMQLKAPAGGRWTVEICGPQRPAEVALGPDFETTWDRKRADF
                     AMMLGTFYCRDLTAPVLVEITREGVDYARVYDIRGRPVPNLLTEPPP"
BASE COUNT          450 a          630 c          676 g          386 t
ORIGIN      
        1 gatcgtctcg acaaaagcct caaggagcag accgagcgaa tcggcggccg gataggtttt
       61 tgtctccggg ctgccgccaa tcaatgaaag ggtgagggac gtttcgtcgc gggcctcggc
      121 agagcctctg gttccgaata cgtggatccg ccagaacatc ggtgcggccc ggaccgtccc
      181 aagcaccccc gtggcgccac tccggaattg caccagggcc gctgcagcgt cacgtggatc
      241 cggcggcggc ttctgcgagt aaacccgcgc gtcgacttta acgatgggac cggcaaggtt
      301 cacgaacgcg tcgagcacat gcaagccggc gccggtcatg ccgccgcccg gagactcgcg
      361 tggatcgtca cgccagccgc ccttcacgcg ggttgaatgc tcgttgctga aattgccctc
      421 gacatgaagg atctcgccaa ggaggccgtc cgcgacagtc cgtttgagct cgcgcatgct
      481 tggaaagcaa cgtttgttgt tgccgagggc aaaggggacg ccggccttgg cgcaggcggc
      541 gatagcactt tcggcctcgg ctcgacggag cgctaatggt ttctcgcacc ataccggttt
      601 gcccgccgcc gctaccgcgc atatttgcgg gacgtgcagg gaatgcggcg ttgccagaaa
      661 aatcgcctgt acgcgcgggt cggtgacggc ttcttcaaat tcagtggaca attcgaagcc
      721 cttggcggcc gcgaattcgc gcaccaactc gggctctttg ctgactccgc gaatgaagca
      781 caggcgcttg cttttgcctt gcaccgcctc gacgatgttt tttccccatc ggccaaggcc
      841 gattacagcg gcatttatca tgggcaggaa agtgactggg cgcggcaaga catcatagac
      901 ggcgcatact aaacaagctg acgcttcaac ggcaatcggg accgtaaggt tggaggagag
      961 acatggacga taaggagctt tacgaacgcg ggctgaaatt gcgtgtcgat atgttcggtc
     1021 gtgacgcggt ggaaaagcga atgaacgctt ttggcgattt cggcaagccg ctgcaacaca
     1081 tcatcaacgc ttatgcttat ggtgatgtat ggcaaagatc ggcgttgccg cctgcagtga
     1141 aatccctcgc gatggtggca atgatggcgg ccaccgggca ccagaacgaa ctgcgcgtgc
     1201 atctgaaggg tgccgtgaaa aatggatgca cggccgagca gattcaggag gtcctgctgt
     1261 tattggcact gtattgcgga atccccgcag cgaacgaagc acatcgcatc gctgcagagg
     1321 tgctgcacga gtcgaattga cgcctagggt ggcggctcgg tgagcaaatt gggcaccggt
     1381 cgcccgcgta tatcatatac gcgcgcatag tcgacgcctt cacgggtgat ctcgaccagc
     1441 acaggcgccg tcaaatcccg gcaataaaat gtgccgagca tcatcgcgaa gtcggcgcgc
     1501 ttgcggtccc aagtggtctc gaagtcgggg ccaagagcca cctccgcagg ccgctgcggg
     1561 ccgcaaatct ccaccgtcca gcgacctccg gcgggagctt tcaattgcat atcattgagt
     1621 tttgctcgca agccttcccc cgcttgcttg aatgcaagac cccagtaatc cagcatgtaa
     1681 ttgtgctgcg ccatgcgaac gccgccggag acccagttga atgccgtgta ttggtaaggg
     1741 tgcagccgta tcatgtcgct caccggcaat gccaagccgc cgatgaagac agcgacgagc
     1801 acggctgtcg ctgacctgcc gagaacgccc gcgcgctcga agagccatcc gcctgcgagc
     1861 cccccaagaa cggcgaacgg cggcacgaca aagacgaagt ggcgcaggcc gttgtagaaa
     1921 gccgggtgcg cgacgattgc cacgactacc ggcaggatgg ctgcgagcga caccagcaag
     1981 aacgcggcgc gtcgatttgg cggcaggtca ggtcgtgcag cggcgacgag ggcgcccatg
     2041 gtgccggcca aaccgagcgc gagcatgatt tcgggcagct tgagcacaaa cagctgcgga
     2101 aggtagctgg cgggcattgc ggtgaccgag atcaccttcc cg
//
LOCUS       DATDHO010000741         1976 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_432782, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000741 DATDHO010000000
VERSION     DATDHO010000741.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1976
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_432782"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            199..672
                     /locus_tag="VIY07_14310"
     CDS             199..672
                     /locus_tag="VIY07_14310"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HEY6382966.1"
                     /translation="MAAVPPDRQAAIQDILASVSDKVLRNAVAPRDFSRALALVDKLH
                     EAGQLNEAAIVEFAGAGQLEDLIAALARLCAAPVELIERLMQNARHDGILLACKAAEL
                     RWPTFSAILKARFAPYELPVTDLTQARTDFLKLSVPTARRMLRFWLVRGAAAAGD"
     gene            766..1644
                     /locus_tag="VIY07_14315"
     CDS             766..1644
                     /locus_tag="VIY07_14315"
                     /inference="COORDINATES: protein motif:HMM:NF013465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEY6382967.1"
                     /translation="MKAAAAGLALVFILGHAAPVTAAEGKIAVVAAENFYGDIARQIG
                     GDRIAVVSIMNNPDQDPHLFETTPATVRQIAGAQLVILNGANYDPWMEKLLAAAPRPT
                     RIVVNAAQLTGRKAGDNPHLWYDPGTMPAVASAIADALSKADAAHASEYAARLKATLS
                     SLATVTQRVAQLKAKHAGAAVTATEPVFGPMADALGLVMRNQRFQLAMMNDTEPSARD
                     IAAFERDLKDRKVKLLIYNNQVSEKLTERLRELANRSKVPVVGVSETMPPNTSFQDWL
                     LGELDALDKALSGPSS"
     gene            1641..>1976
                     /locus_tag="VIY07_14320"
     CDS             1641..>1976
                     /locus_tag="VIY07_14320"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6382968.1"
                     /translation="MSIITVDHATLSVGGRIVLADVSFKIEAGEFIGVLGPNGAGKTT
                     LMRAILGLLSPERGSLKVFGRTPERGNSEIGYLPQVRTVLPDLRVCGRDFIASSLYGE
                     RWGLPLQSQH"
BASE COUNT          391 a          615 c          611 g          359 t
ORIGIN      
        1 ggggcgacac cggcgtcgta cgcaagctat cgcgaaatca gggggcgact ttttcagatc
       61 ggggatatgc gaccttggtg gagcgcgccg aaacggacga tcgactggcg gaaaatctgg
      121 gcatgcggct ggatataccg ccgcatttac tgcaagacct catcgtcaag gcagccgaga
      181 ccgtgcgcgt gcagtctatt ggctgcagtt ccgcccgatc gccaggcggc aattcaggac
      241 attcttgcct cggtgtcgga caaggtcctg cgcaacgcgg tagctccgcg cgacttcagc
      301 cgagccttgg ccttggtcga caagttgcat gaggcagggc agctcaacga agcggcaatc
      361 gtggaatttg ccggcgcggg tcaactcgag gacctgatcg ccgctctcgc tcgactgtgt
      421 gcggcgccgg tcgagctgat cgagcgcctg atgcagaatg cgcgccacga cggcatcctg
      481 ctcgcctgca aggccgccga actgcggtgg ccgacattca gcgcgatcct gaaggcacgg
      541 ttcgccccct acgaactgcc ggtgaccgac ctcacgcagg cgcgaaccga tttcctcaag
      601 ctgtcggtgc cgaccgcgcg ccgaatgctc cgtttctggc tggttcgcgg cgcggcagcg
      661 gccggcgact gacatcgccc ttaagggcgg gcggcagtct tgcccgatga aatgttataa
      721 tgttacattt aaggcccagg gcttggagat catcgttttc ttgccatgaa agctgctgcc
      781 gcagggcttg ccctcgtttt cattcttggt cacgccgcgc ctgtcactgc cgccgagggc
      841 aaaattgcgg tggtagcggc ggaaaacttc tacggcgaca ttgcgcgcca gatcggcggc
      901 gaccggattg cggtcgtcag catcatgaac aatcccgacc aggatcccca cctgttcgaa
      961 accacgcctg ccaccgtgag gcagatcgcg ggcgcgcagc tcgtcatcct caacggcgca
     1021 aattacgacc cctggatgga gaagctgctc gctgcggcgc cgcgcccaac ccgcattgtc
     1081 gtcaatgccg cccagctcac cggacggaag gccggagaca acccgcacct ctggtacgat
     1141 ccgggcacga tgccggcagt ggctagtgca atcgccgacg cgctcagcaa agccgacgct
     1201 gcgcacgcgt ccgagtacgc agcaagactc aaagccaccc tctcctcgct cgcgaccgtc
     1261 acgcagcgcg ttgcacagct gaaagcaaaa catgccggtg ccgccgtgac cgccaccgag
     1321 ccggtattcg ggccaatggc agacgctctg ggactggtca tgcgcaacca gcgctttcag
     1381 cttgcgatga tgaacgacac cgagccgagc gctcgcgata tcgccgcgtt cgagcgcgac
     1441 ctgaaagatc gaaaggtgaa gcttttgatc tacaacaacc aggtatcgga gaagctgacc
     1501 gaacggttgc gcgaacttgc caacaggtcg aaggtgcctg tggtcggtgt cagcgagacg
     1561 atgccaccaa atacgtcctt tcaggactgg ctactcggtg aactcgacgc gctcgacaaa
     1621 gcgctgagcg ggccgagctc atgagtatca tcaccgtcga tcacgccacg ctgagcgtcg
     1681 gcggccgcat cgtgcttgcc gacgtgagct tcaagatcga agccggcgaa ttcatcggcg
     1741 tgctaggtcc gaacggggcc ggcaaaacga cgttgatgcg ggcaatcctt ggattgctgt
     1801 cgcctgagag aggcagcctg aaagttttcg gtcgaactcc cgagcgcgga aattctgaaa
     1861 ttggttatct tccgcaggtg cgcaccgtgc tccccgacct gcgggtgtgc gggcgtgact
     1921 tcattgccag ttcgctctat ggcgagcgtt gggggctgcc actacaaagc cagcat
//
LOCUS       DATDHO010000742         4057 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_334076, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000742 DATDHO010000000
VERSION     DATDHO010000742.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4057)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4057)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4057
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334076"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2164)
                     /gene="napA"
                     /locus_tag="VIY07_14325"
     CDS             complement(<1..2164)
                     /gene="napA"
                     /locus_tag="VIY07_14325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009325 - nitrate reductase complex
                     [Evidence IEA];
                     GO_function: GO:0008940 - nitrate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0042126 - nitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HEY6382969.1"
                     /translation="MKKNRLDRREFLKLEAAAMAAAAGGMPTPLAAQNLVTDRSFTEL
                     KWNKAPCRFCGTGCGVMVATKDGRVVATHGDTKAEVNRGLNCVKGYFLSKIMYGHDRL
                     THPLLRKKNGKYDKNGEFTQVSWDEAFDVMAQQFKAALAKRGPSGVGMFGSGQWTIWE
                     GYAANKLFKAGFRSNNIDPNARHCMASAAVGFMRTFGMDEPMGCYDDFEAADAFVLWG
                     SNMAEMHPILWSRVTDRRLSAPHVRVAVLSTFEHRSFDLADISIVFTPQTDLAILNAI
                     ANHIITTNRVNKDFVDKHTVFKRGQTDIGYGLRPEHPVETKASGRSKAGDATDITFED
                     YAKFVSEYTLEKASKMSGVPVNRLRDLAELYADPKTKVVSFWTMGFNQHTRGVWCNNL
                     VYNIHLLTGKISEPGNSPFSLTGQPSACGTAREVGTFSHRLPADMVVNNKDHRDKAEK
                     IWNLPEGTISPQPGYHAVLQNRMLRDGKLNAYWVQVNNNLQAAANTNEEAYPGYRNPE
                     NFIVVSDAYPTVTAQAADLVLPSAMWVEKEGGYGNAERRTQFWHQLVNPPGEARSDLW
                     QLMEFSKRFRIEEVWPAELIAKKPEYKGKTLFDVLYRNGEVDKFPLSDMAADFENYES
                     KTFGFYVQKGLFEEYAAFGRGHGHDLAPFDAYHETRGLRWPVVQGRETRWRYREGYDP
                     YVKAGKGVEFYGFADGKARIFALPYEPPPESPDTTYPYW"
     gene            complement(2191..2469)
                     /locus_tag="VIY07_14330"
     CDS             complement(2191..2469)
                     /locus_tag="VIY07_14330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HEY6382970.1"
                     /translation="MNGRWVTGGGSGPHSIEIASILVQARPEKLDAVARAIEALPGTQ
                     IYSRDPKGKLVVVIEARDVGSIGTTLNTISSLPHVLTAALVFHGTDDG"
     gene            complement(2523..2705)
                     /locus_tag="VIY07_14335"
     CDS             complement(2523..2705)
                     /locus_tag="VIY07_14335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase, NapE protein"
                     /protein_id="HEY6382971.1"
                     /translation="MSTPQNLADDSKRKRRMEIYAFLIITAVVMPFVAVATVGTWGLT
                     VWIYQAINGPPGPPSK"
     gene            complement(3130..>4057)
                     /locus_tag="VIY07_14340"
     CDS             complement(3130..>4057)
                     /locus_tag="VIY07_14340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="lysine-2,3-aminomutase-like protein"
                     /protein_id="HEY6382972.1"
                     /translation="DPDDPIARQFIPDPSELEHQAGESADPIGDDAWSPVDGIVHRYP
                     DRVLFKLTHICAVYCRFCFRREMVGPGRAVALSAEALQRALDYIRAHSEVWEVILTGG
                     DPLVLSPRRLRSIMKMLAEIEHVKVVRIHTRLPVADPVRVTPALVRSIKMKTKPTYVA
                     VHVNHPRELTAPARAACARLADSGIPLLAQTVLLAGVNDTPEIMSALMRALVECRIKP
                     YYLHHADLAPGTGHLRTDITTGQELMRSIRGRLSGLCQPTYVLDIPGGHGKSPIGANH
                     IERTGSNGSSHYIVEDFSGRRHRYPPSATSGE"
BASE COUNT          770 a         1186 c         1218 g          883 t
ORIGIN      
        1 gccagtacgg gtaggtggtg tccggggatt cgggcggcgg ctcgtaaggc agcgcgaaga
       61 tgcgggcctt gccgtcggcg aagccgtaga attccacgcc cttgcctgcc ttgacgtaag
      121 gatcgtagcc ctcgcgatag cgccagcggg tctcccttcc ttggacgacc ggccaccgca
      181 atccgcgcgt ctcgtgatac gcgtcgaagg gtgcgaggtc gtggccatgg ccgcgaccga
      241 aagcagcata ttcctcgaac aatcccttct gaacgtagaa gccgaatgtc ttcgattcgt
      301 aattctcaaa gtccgctgcc atgtcggaca gtggaaactt gtcgacctcg ccgttcctgt
      361 agagcacgtc gaacagcgtc ttgcctttgt attccggctt cttggcgatc aactcggctg
      421 gccagacctc ctcgatcctg aagcgcttgg agaactccat cagttgccag agatcggagc
      481 gcgcctcgcc gggaggattc accagctggt gccagaattg cgtgcgtcgt tcggcgttgc
      541 cgtagccacc ctccttttcg acccacatcg cgctcggcaa caccaggtcg gcggcctgcg
      601 cggtgacagt cgggtatgcg tcagagacaa cgatgaaatt ctcgggattg cgatagccgg
      661 gataggcctc ctcgttggta ttggctgcgg cttgaagatt gttgttcacc tggacccagt
      721 acgcattgag cttgccgtcg cgcagcatcc gattctgcag cactgcgtgg tagccaggct
      781 gcggcgagat ggtgccttcg ggcagattcc agatcttctc tgctttatcg cggtgatcct
      841 tgttgttcac caccatgtcg gcaggcaatc gatgggaaaa agtgccgacc tcgcgcgcgg
      901 tgccgcaagc cgacggctgg ccggtcagag aaaatggact gttgcccggc tcggaaatct
      961 ttcccgttag caagtgaatg ttatagacga gattgttaca ccacacgccg cgggtgtgct
     1021 ggttgaagcc cattgtccag aagctgacaa ccttggtctt cggatcggca tagagttcgg
     1081 caaggtcgcg aagacgattg accggaacgc cggacatctt cgaggctttc tcaagtgtgt
     1141 attcggagac gaatttcgcg tagtcctcga atgtgatgtc ggtcgcatcc cccgccttcg
     1201 aacggccaga cgccttggtt tccaccggat gttccggccg caatccgtag ccgatgtcgg
     1261 tctggccgcg tttgaagacg gtatgcttgt cgacaaagtc cttgttgacc cgatttgtcg
     1321 tgatgatgtg gttcgcgatg gcattgagaa ttgcgagatc ggtctgcggc gtgaaaacga
     1381 tcgaaatgtc ggccagatcg aaggatcggt gctcaaaggt cgatagtacc gcaacgcgaa
     1441 catgcggcgc gctcagtctg cggtcggtga cccggctcca gaggatcggg tgcatctccg
     1501 ccatgttcga gccccagagg acgaaggcat cggcagcctc gaagtcgtcg tagcagccca
     1561 tcggctcgtc catgccaaat gtccgcataa agcccacggc ggccgacgcc atacagtgac
     1621 gggcgttggg atcgatgttg ttggaccgga agcccgcctt gaacagcttg ttcgccgcgt
     1681 agccctccca aatcgtccat tggcccgatc cgaacatgcc aacgccgctc ggtccacgct
     1741 ttgcaagcgc agccttgaac tgctgtgcca tcacgtcgaa ggcttcgtcc cacgacacct
     1801 gggtgaattc gccgttcttg tcgtatttgc cgttcttctt gcgcagaagc ggatgcgtga
     1861 ggcggtcgtg gccgtacatg atcttggaaa ggaaatatcc tttgacgcag ttaagcccgc
     1921 ggttgacctc ggccttggta tccccgtggg tcgcgacaac gcggccgtcc ttggttgcga
     1981 ccatcacacc gcaaccggtg ccgcaaaacc ggcaaggggc tttgttccac ttcagttcag
     2041 tgaaggagcg gtcggtaacc aggttttgcg ccgccagagg cgtcggcatt ccgcccgccg
     2101 ccgccgccat cgcagcagcc tccagtttca ggaattcacg gcggtccagt cggttctttt
     2161 tcatcgccgg tctcctattg ttgttcgcat tcagccgtca tccgtgccgt ggaacaccag
     2221 tgctgcggtc agcacatggg gcaacgatga aatcgtattg agtgtcgtgc cgatcgagcc
     2281 cacgtcccgg gcctcaatga cgactacgag cttgcctttg ggatcgcggc tgtagatttg
     2341 cgtacccgga agcgcttcga ttgcacgcgc gaccgcatca agtttttctg gccgcgcctg
     2401 aacgagaatg ctggcgattt cgatggaatg cggtccactg ccgccgcccg tcacccaacg
     2461 accgttgata aacttgcggc gatccacgtt gcgggtgaac ggtgtttcga ccacagcgcg
     2521 cctcatttcg acgggggacc gggcggaccg ttgatcgctt ggtaaatcca caccgttagg
     2581 ccccacgtgc cgacggtggc cactgcgaca aatggcatca ccaccgcggt gatgatgagg
     2641 aacgcataga tttccatccg ccgcttgcgt ttcgaatcat cggccaggtt ttgcggcgtg
     2701 ctcatgaatt tagccgggct tccgctgtga ttggacgcaa tatgctagcg agggacagcc
     2761 caaccggctt tgctttggat caaaaaccgg attttcgctt tttggcaaat atttcacggc
     2821 ggtagcccgc attggttccg aggaccgaag ccgcggtcgc attaatccac agcttcatag
     2881 ctgctatgcg aagatgccgc acttttcacg cattttttaa catacaaatt atgcgccgga
     2941 tgatccttta acagctacaa gccttcgctg tctgcgaagt gctcttcggg cgtcaggcaa
     3001 tgattaacgg caagaatgta gtggcggctc tgaggcgtga cgcggccttt gtttggcacg
     3061 cggtgatcgc ggttgtcttc atctgctttg cgacactggc tgtggccgcg gccttgctcg
     3121 acctcttagc tattcgccac tagtcgccga cggcggatat cggtgccgcc gtccgctgaa
     3181 atcctccacg atgtagtggg agctcccgtt ggagcccgtg cgctcgatat ggttcgcacc
     3241 gatcggcgat ttgccgtggc ctccagggat atcgagcacg taagtcggct gacataggcc
     3301 cgacaagcgg ccacgaatgc ttcgcatcag ctcctgacca gtcgtgatgt cggttcgcaa
     3361 atgaccggtg ccgggcgcga ggtccgcgtg gtgcaggtag tatggcttga tccggcattc
     3421 gaccaaggcc cgcatcagag cgctcatgat ctcaggcgta tcattgacgc cggccagcag
     3481 cacagtctga gcaagcaacg ggatgcccga atcggccagc cgggcgcagg ccgcgcgcgc
     3541 gggcgcagtc agttcgcggg ggtggttcac gtggacggcc acataagttg gttttgtttt
     3601 catcttgatc gaacgcacca gggccggggt tacgcgcacg gggtcggcca cgggcaaccg
     3661 ggtgtgaatg cgcacgactt tcacgtgctc gatctctgca agcattttca tgatcgaacg
     3721 cagacgtcgt ggcgacagga ccagcggatc accacctgtc aggatcactt cccagacttc
     3781 cgaatgcgcc cggatatagt ccagcgcccg ttgcagcgct tcagccgaga gtgcgacagc
     3841 cctgcccggc ccgaccattt cgcggcggaa acaaaatcgg caataaaccg cgcagatgtg
     3901 ggtgagcttg aacagcacgc ggtcaggata gcgatggacg attccatcca cgggactcca
     3961 ggcatcgtca ccgatcgggt cggcgctttc gccggcttgg tgctcaagtt cagacggatc
     4021 gggaataaac tgccgcgcga ttggatcatc cgggtcg
//
LOCUS       DATDHO010000743         1544 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_284993, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000743 DATDHO010000000
VERSION     DATDHO010000743.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_284993"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..958
                     /locus_tag="VIY07_14345"
     CDS             <1..958
                     /locus_tag="VIY07_14345"
                     /inference="COORDINATES: protein motif:HMM:NF017760.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6382973.1"
                     /translation="ALAQSFSQFFLWTVVSRVGGAAQHPVGSALLSHHFRRKHLSTAL
                     AAHFTAGNVGTALIPLFAAILITLWGWRITTILFAIPAVLVGLAMCAFLHDPRATNEP
                     ESHATNSFWQDSKLAISNMNLRWILLASVVAAGGSGHGIVSAFLPLYLSHNLGMESTK
                     VGLVFTVMMIGSILGPMLGGKLTDRWHPQKILLGAYSVAALTTVLFPWVGGNVFSISI
                     AALILGISAFGTHPILQTMVVQVTDDRIRDMGFAWFYTAAFMAGAIWSPAVGYIAESL
                     GLTAVFGAMAASFVLASLCIVLGQLHHIPQAQLATTDSWSRS"
     gene            1065..>1544
                     /locus_tag="VIY07_14350"
     CDS             1065..>1544
                     /locus_tag="VIY07_14350"
                     /inference="COORDINATES: protein motif:HMM:NF019335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HEY6382974.1"
                     /translation="MAGAAVARAAEADPIEVYTWGQQPTSAATEQTRISKDLELRPSN
                     TPSDVMRLVPSLIIGQHHGGGKADQILFRGFDSDHGTDFQVSVDGIPVNMPSNAHGQG
                     YADLHWLIPETIDRVEIFKGSYFPHLGDFATSGAINIVTRRYAPQSSVTVMGGSYETA
                     "
BASE COUNT          289 a          439 c          432 g          384 t
ORIGIN      
        1 cgctcttgcc cagagctttt cgcaattttt tctctggacg gtcgtgtcac gagtcggcgg
       61 cgccgcccag catcccgtgg gcagcgcgct tttgtcgcat cacttccggc gcaaacattt
      121 gagcactgcg ctggcggctc acttcactgc ggggaacgtt ggcaccgcgc tcatcccctt
      181 gtttgcagct attctcatca ctctttgggg ctggcgcatc acgacgattc tattcgccat
      241 tccagcggtc ctcgtcgggt tagcgatgtg cgctttcttg cacgatcctc gagcgaccaa
      301 cgaaccggaa agtcacgcca cgaactcgtt ctggcaggac agcaagctcg ctataagcaa
      361 tatgaacctg cgctggattc tcctggcatc ggtggttgcc gccggcggtt ccggccacgg
      421 cattgtatcc gcttttctac ctctttatct cagtcacaat ctgggcatgg aatcgaccaa
      481 agtgggtctg gtgttcaccg ttatgatgat cggcagtatc ctcggcccga tgctcggcgg
      541 caagctcacg gaccgttggc atccgcagaa aattcttcta ggagcctata gcgtggcggc
      601 gttgaccacc gtgttgtttc cctgggtcgg cggcaacgtg ttttctattt cgattgccgc
      661 tctgattctt ggaatcagcg cctttggaac ccatcccata ttacagacca tggttgtgca
      721 ggtcactgac gaccgaatac gagacatggg attcgcctgg ttctataccg ccgccttcat
      781 ggcgggtgcc atttggtcgc cggcggtagg atacatcgca gagtcgctgg gattgacggc
      841 agtcttcggc gcaatggcgg cgtcgtttgt gttggccagc ctttgtatcg tgctcggcca
      901 actgcatcat attccgcagg ctcagttggc aacgaccgat tcgtggagcc gtagttaaaa
      961 atttttgtgc ttgggtgtta cggaattaaa atacgtatta ctcctagagt ggcatgcggc
     1021 tattgagacg tttaactggt gtaatatttt caacggctgt ttttttggcc ggcgcggcgg
     1081 tggcacgcgc tgctgaagct gatccgattg aggtttacac gtggggtcag cagcccactt
     1141 cggcggcaac ggaacaaacc cgaatctcga aggatttgga gcttcgtcct tcgaacaccc
     1201 cgagcgatgt catgagactg gtgccgagcc tgatcatcgg ccagcaccat ggcggcggca
     1261 aggcggatca gatcctgttt cgcggtttcg attccgatca cggaaccgac tttcaggttt
     1321 cggtcgacgg cattccggtg aacatgccca gcaatgccca tggacaggga tatgccgatc
     1381 tccattggct cattccggag accatcgacc gggtagagat cttcaagggt tcctatttcc
     1441 cgcatctcgg tgacttcgcc acatccggcg ccatcaacat cgtcaccagg cgctacgccc
     1501 cacaatcgag cgtcaccgtt atgggcggca gttacgagac ggcg
//
LOCUS       DATDHO010000744         1564 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_186070, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000744 DATDHO010000000
VERSION     DATDHO010000744.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1564
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186070"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1529)
                     /locus_tag="VIY07_14355"
     CDS             complement(<1..1529)
                     /locus_tag="VIY07_14355"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HEY6382975.1"
                     /translation="MINAGTKRGLGFHLCASGGNEIILNAADYLDYEAECEEIEVIAT
                     YIEAAPKEPQRFAAALDRAVANGKAVLVLRAGRTERAKRNVIAHTGQLAGSAAAWDAF
                     FEQHGAIIIDDLDDLIDTTALFAGGKMRPDKHERGVGLITISGGDCTLLSDIADQEGV
                     PVPDLSPETQRVLIESLDKPTLLGNPLDVEDLQRIKPEAFDQCLGKFFEEPKIDMVGL
                     RLNLPDSLTPSSEKLYQKISDLSSDNDKRVFVLTRATEPPAEVWYHRLNSLGLTFTGD
                     YRKSLRAMSRLRKNEQDRATGRFAAATRAGNAPAQVQFKSGVLSHSATEKLLESYGIP
                     LAPAALVQSAQEAAQAADKVGYPCVLKVASVDIPHKTEFGALKLGLENETAVLKAYDE
                     MTSRVRAAKPDADIEGVLVQQQIKGVECLLGISRDEQLGPTLVMGLGGIFVEILADVA
                     IRIPPIAPAEARRALENLKGAKIFSGVRGAPPADIDALAVMAAKLSWLAYDRRDYIAE
                     L"
BASE COUNT          318 a          444 c          458 g          344 t
ORIGIN      
        1 tccagctcgg cgatataatc gcggcggtca taggcgagcc aggaaagctt ggcagccatc
       61 acggccagcg cgtcgatgtc ggctggcggg gccccgcgca cgccggagaa tatttttgcg
      121 cctttgagat tctccaaggc ccgacgcgct tcggcggggg cgatgggcgg gatacggatc
      181 gcgacgtcgg ccaagatctc gacaaaaata ccgcccagcc ccatcaccaa agttggccca
      241 agttgttcgt cgcgcgaaat accgagcagg cactcgacgc ccttgatctg ctgctggacc
      301 agcacgcctt cgatatcggc gtcgggcttg gccgcgcgta cgcgagacgt catctcatca
      361 taggccttca ggaccgcagt ttcgttttcc aaacccagct taagggcgcc aaattctgtc
      421 ttatggggaa tgtcaacgga ggcgactttc aacacgcacg ggtaaccgac tttatccgct
      481 gcttgtgcgg cttcctgagc tgactgcacc agcgctgcgg gcgccagtgg aataccgtac
      541 gattcaagca acttttccgt tgcgctgtga gacaaaactc cacttttgaa ttgaacttga
      601 gccggagcgt tgcccgcacg cgtggcagcg gcgaaccggc ctgtggcgcg gtcttgttcg
      661 ttcttgcgta gacgactcat ggcgcgcagc gacttgcggt agtcgccggt aaaggtcagc
      721 cctaagctgt tcaaccggtg ataccaaacc tccgctggtg gttcggtggc gcgggtgagc
      781 acaaacacgc gcttatcgtt gtcggaactc aagtcagaaa tcttttgata aagcttttct
      841 gatgaaggcg tgagggaatc cggtaaattc aagcgcaagc ccaccatatc gatcttgggc
      901 tcttcgaaga attttcctaa acactgatca aaggcttcag gctttattcg ctgcagatct
      961 tcaacgtcga ggggattccc aagcagtgtc ggtttgtcca ggctttcgat cagcactctt
     1021 tgcgtctcgg gactaaggtc cggcacgggc acgccctctt gatcggcgat gtcggaaagc
     1081 aaggtgcaat cgcctccgga gattgtgata agaccgacgc ctcgctcatg tttgtccggt
     1141 cgcatcttcc cgccggcgaa caacgccgtc gtgtcgatga gatcgtcaag atcatcgatg
     1201 ataatggcgc cgtgttgttc gaaaaaggcg tcccatgcag cagctgaacc ggcgagttgt
     1261 cccgtgtgag cgatgacatt gcgcttcgct cgttccgtgc ggccggcacg gagcaccaag
     1321 accgccttgc cattggcaac ggcgcgatca agggccgcgg caaaacgttg cggttcctta
     1381 ggtgcggctt cgatataggt ggcgatgacc tcgatttcct cgcactcggc ctcatagtcg
     1441 agataatcgg cggcgttgag gataatctcg ttgcctccgc tggcgcagag atggaaaccg
     1501 aggccgcgtt tagtgcctgc gttgatcaag acattcatca tgccgctgct ctggaagatg
     1561 cagc
//
LOCUS       DATDHO010000745         5864 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_383498, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000745 DATDHO010000000
VERSION     DATDHO010000745.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5864
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_383498"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VIY07_14360"
     CDS             <1..334
                     /locus_tag="VIY07_14360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HEY6382976.1"
                     /translation="PIAGQGLNMGLRDVAALAEAVADATRLGLDPGGPDVLERYQRWR
                     RFDTMMMGVATDGLNRLFSNQSDALRLVRDIGLGLVERMPALKRMFIREAAGFTGEVP
                     KLLRGEAL"
     gene            complement(331..1020)
                     /locus_tag="VIY07_14365"
     CDS             complement(331..1020)
                     /locus_tag="VIY07_14365"
                     /inference="COORDINATES: protein motif:HMM:NF013353.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HEY6382977.1"
                     /translation="MNASGREGRCLGLIGGLGPGATVYYYRGLLAAHAAAGKAARLLI
                     AHADVNQVRAFVENDDRAGLARYLAGLVSSLSAGGAEMGAIVAITPHICAAELTAISP
                     LPLIDIVSEVAAEIQARRLRRGALLGTRFTVESRMFGRLGVDVIMPKASEIEQIHNTY
                     MDALNDRSTPAQIDELRQLARTLISRDGADAVLIAGTDLSMVLNERNAGFPTIDCADV
                     HIRVIAKKLLA"
     gene            complement(1017..1646)
                     /locus_tag="VIY07_14370"
     CDS             complement(1017..1646)
                     /locus_tag="VIY07_14370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY6382978.1"
                     /translation="MIKIWGRNTSSNVQKAMWAVGELKLEHERIDIGGPFGKNREPAY
                     LAMNPNGLVPTLEEEDGFLLWESNSIVRYLAGKHDKNGLLEPKDATQRALASQWMDWQ
                     LSVAGPAIGPAFWGLIRTPPEKRDMAAIKASQEKTTDAMKMLDAQLGKTEYVAGPAFS
                     YGDIPVGIMCYRFVQLVPERPKMLNLDRWYGAISSRQAFKDHVGSVPLT"
     gene            complement(1824..2027)
                     /locus_tag="VIY07_14375"
     CDS             complement(1824..2027)
                     /locus_tag="VIY07_14375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEY6382979.1"
                     /translation="MSTVPPAERPADSVDPKLLEILVCPVTKGPLEYDAEKQELISRK
                     AKLAYPIRDGIPIMLPEEARRLD"
     gene            complement(2137..2811)
                     /locus_tag="VIY07_14380"
     CDS             complement(2137..2811)
                     /locus_tag="VIY07_14380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HEY6382980.1"
                     /translation="MPMNAQYRGPIEMPGVIPVFPLPGALLLPRGQMPLNIFEPRYLA
                     MVDDALRDGHRLIGMIQPDAGHGGQVDKPSLYTIGCAGRITQLAESGDGRYLIELTGV
                     ARFRIEEELKVATPYRQCRVTYAPFADDFVARKGENAVDRSALLSALTEFLKANDLKA
                     DWEGIERAPNEALVNALSMMSPYGTAEKQALLEAPDLKTRAEILIAITEIELAKKNTE
                     GEPQLQ"
     gene            complement(2857..3756)
                     /gene="trxA"
                     /locus_tag="VIY07_14385"
     CDS             complement(2857..3756)
                     /gene="trxA"
                     /locus_tag="VIY07_14385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEY6382981.1"
                     /translation="MLQNGGATTTAEVVKDTTTQAFMKDVIEESRRQPVLVDFWAPWC
                     GPCKQLTPVLEKAVKAAKGKVKLAKMNIDEHPAIPGQMGIQSIPAVIAFSNGQPVDGF
                     MGALPESQVAAFLERITKGTVRAEEKDLLKAADAALAAGNVTDAAEMYAQLLAEDSAN
                     ISALAGLVRAYVQTGALEQAKQTLALVPEAKRNEPAVAAARAALEVAEQAKSVGPLAE
                     LEKKMAADPQNHQARFDLAVALNAKGKRDDAVKYLLEIVKRDRKWNDDGARKQLVQLF
                     EAWGPTDPATVEGRKRLSSILFS"
     gene            complement(3841..4356)
                     /locus_tag="VIY07_14390"
     CDS             complement(3841..4356)
                     /locus_tag="VIY07_14390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006472222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HEY6382982.1"
                     /translation="MPKTPEQLFAEFDSLGIKHSTVKHPPLFTVEQSRALRGQIPGGH
                     TKNLFLRDKKYAIYLVVALEEAHIDLKGLHRRLGASGRFSFGSSDLLREVLGVEPGAV
                     TPFGAINDTEGRVAVILDAAMMEQKTLNYHPLVNTMTTSISREDLVKFLESTGHIPRI
                     ERLSGQAPTMP"
     gene            4843..4917
                     /locus_tag="VIY07_14395"
     tRNA            4843..4917
                     /locus_tag="VIY07_14395"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4875..4877,aa:Gly,seq:gcc)
     gene            5073..5354
                     /locus_tag="VIY07_14400"
     CDS             5073..5354
                     /locus_tag="VIY07_14400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382983.1"
                     /translation="MADGGHAANCESGRVAHPASIGGFCLDAKRARNFLNIDAIDARR
                     YDQDNLVTGAQDDRFRNLCDGTADCCGRVLRRAHSIRKNLDRVGMASFL"
     gene            complement(5401..>5864)
                     /locus_tag="VIY07_14405"
     CDS             complement(5401..>5864)
                     /locus_tag="VIY07_14405"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEY6382984.1"
                     /translation="LNNELDDFTAKPGTANAYGLIGYGSNLPGPRKRPLSSMTPTIVL
                     KDGKPVLITGSPGGSRIISTVLQVVVNAIDFRMPIDAAVSAPRLHHQWQPDEVIVEPG
                     VAPDVLDALARRGHKVSPTIPLTAVNSIAITPNGYVGAADRRTRGSLAAGY"
BASE COUNT         1091 a         1753 c         1757 g         1263 t
ORIGIN      
        1 tccaatagcc gggcaggggc tgaatatggg attgcgcgat gttgcggcgc tggcggaagc
       61 ggttgcggac gcgactcgcc tggggctcga ccccggcggg ccggatgtgc ttgagcgcta
      121 ccaacgttgg cgacgcttcg acaccatgat gatgggcgtt gccacggacg ggttgaacag
      181 gctgttctcc aatcagtccg acgcgctccg gcttgtgcgc gatatcgggc ttggcctggt
      241 tgagcgtatg cctgctctca agcgcatgtt catccgcgaa gcggcaggct tcacgggcga
      301 ggtgccgaaa ctgctcagag gcgaagcgct ctaggcaaga agttttttcg caatcacccg
      361 tatatgcacg tctgcgcaat ctattgtcgg aaatcctgca tttcgctcgt tgagcaccat
      421 tgagagatcg gtgccggcga taagcaccgc gtcggcgccg tcgcgtgaaa tcagcgtgcg
      481 cgcaagctga cgcaattcat cgatctgcgc cggcgtgctg cgatcgttaa gcgcatccat
      541 ataggtattg tggatctgct cgatctcgct cgctttcggc ataatcacgt caacaccaag
      601 acggccgaac atgcggctct caacggtgaa ccgcgtgccg agcagggccc ctcgcctgag
      661 gcgccgcgct tggatttccg cagcaacttc ggaaactatg tcgatcagcg gcaaagggga
      721 aatcgcggtc aactcagcgg cgcagatatg cggagtgatt gcgacgatcg cgcccatctc
      781 ggcgccgcca gccgacaggc tggagacgag gcctgccaga tagcgcgcaa gcccggcacg
      841 gtcgtcgttt tcgacaaaag cgcgtacctg gttcacgtcg gcatgtgcga tgagcaggcg
      901 tgccgccttt ccagcggccg catgagcggc gaggagccca cgatagtagt agacagttgc
      961 accgggcccc aggccaccga tcaggccgag gcatcgcccc tctctgccgg acgcgttcat
     1021 gtcaatggaa cgctgccaac gtgatccttg aatgcctggc gcgaggagat ggcaccgtac
     1081 caccgatcaa ggttgagcat cttcgggcgc tccggcacca gttgcacaaa gcgataacac
     1141 atgatcccga ccgggatgtc gccgtaggaa aatgccggac ccgcgacgta ttcggtcttt
     1201 cccagctgtg cgtcgagcat cttcattgca tcggtggttt tttcctgcga cgccttgatt
     1261 gcggccatgt cgcgcttttc gggcggcgtc cggatcagtc cccagaatgc cgggccgatc
     1321 gcaggtcctg cgaccgacag ctgccaatcc atccactggc tggcgagcgc gcgctgtgtg
     1381 gcatccttcg gctcaagcag tccgttttta tcgtgcttgc cggcaaggta gcgcacgatc
     1441 gaattcgatt cccacaaaag gaaaccgtcc tcttcctcca gcgtcgggac gagcccgtta
     1501 ggattcatcg cgaggtaagc gggctccctg ttctttccaa acgggccgcc aatatcgatg
     1561 cgctcgtgtt cgagcttgag ctcgcccact gcccacatgg ctttttgcac gttggaggat
     1621 gtgttccggc cccagatctt gatcatccgc atttctccct aaaagcattc cttactctgt
     1681 catggccggc cttgtcgcgg ccctccacgt ctttcaacct ttgtggcacc tgagaagacg
     1741 tggatgcccg gcacaaggct tgtgctcggg ccggccgtag gccggacccg agtgccgggc
     1801 atgacggtag caatcgatga aattcaatcc agccggcgtg cttcttccgg cagcatgatc
     1861 gggattccgt cgcgtatggg ataggcgagc tttgccttgc gcgagatcag ctcctgcttt
     1921 tcggcgtcgt actccagagg ccccttcgtg accgggcaca caagaatttc cagcagtttc
     1981 ggatcaacgc tgtcggcggg tcgctcggcg ggcgggacgg tggacataag gcctctctct
     2041 tgtcatgccc ggaccttgtg ccgggcatct acgactccat gatcgtagcc tacggacatg
     2101 gatggccggg gcaagaccgg ccagcgccgt ttctgatcac tggagttgcg gctcgccctc
     2161 ggtatttttc tttgcgagtt cgatctcggt gatcgcgatg aggatttcgg cgcgcgtctt
     2221 tagatcgggg gcctccagga gcgcctgttt ttccgccgtt ccgtaagggg acatcatcga
     2281 caacgcattg accagcgctt cattcggcgc tctttcgatg ccttcccagt cggccttcag
     2341 atcgttggct ttcagaaact cggtaagggc tgaaagcaat gccgagcggt cgacagcgtt
     2401 ttcgcccttg cgcgcaacaa aatcatcagc gaaaggcgcg taagtgacgc ggcattgccg
     2461 ataaggtgtc gcgactttca gctcctcttc aatgcggaaa cgcgcgacgc cggtcagttc
     2521 gatcagatag cggccatcgc cgctctcggc gagttgcgtg atgcgtccgg cacatccgat
     2581 cgtgtaaagg cttggtttgt ccacctgacc accgtggcca gcgtcgggct ggatcatgcc
     2641 gataagtcta tggccatcgc gcaatgcgtc gtcgaccatt gccaggtagc gcggctcaaa
     2701 gatattcagc ggcatctgtc cgcgcggcaa aagtagcgcg cccggcagag ggaagaccgg
     2761 gatgaccccg ggcatctcga ttggtcctcg atattgagcg ttcatcggca tcttcgcgtc
     2821 accccgccac tcggtgccgc aaatgtggcg cacactttag gaaaacaaaa tcgaagacaa
     2881 acgcttgcgt ccctctacgg tcgccgggtc agtcggcccc caggcctcaa aaagctgaac
     2941 gagttgcttg cgggcgccgt catcgttcca cttgcggtct cgcttgacga tttcaagaag
     3001 atacttgacc gcgtcgtctc gcttgccttt cgcgttgagc gcgaccgcaa ggtcgaaacg
     3061 ggcttgatga ttctgcggat cggccgccat ttttttctcg agttctgcca gcggccctac
     3121 tgacttggcc tgttcggcaa cttcgagcgc cgcgcgtgcg gcggcaacgg ccggctcatt
     3181 tcgcttcgct tccggaacga gtgcgagcgt ctgtttggcc tgctctagcg cgccggtctg
     3241 cacataggca cgaacgagcc cggcgagcgc gctgatgttg gcgctgtctt cggcaaggag
     3301 ctgcgcatac atttccgcgg cgtcagtcac gttacccgca gccagcgcag cgtcggccgc
     3361 tttcaagaga tccttttcct cggcccgtac cgtacctttg gtgatcctct ccaggaaggc
     3421 agcaacctgg ctttcgggca gtgcgcccat gaatccgtcg accggttggc cgtttgagaa
     3481 cgcaatcacc gcggggatgg attggatgcc catctggcct gggatggcag gatgctcatc
     3541 aatgttcatt ttggcgagct tgaccttgcc cttggctgcc ttcacggctt tttccaggac
     3601 aggggtgagt tgcttgcagg gtccgcacca cggcgcccag aaatcaacca ggacgggctg
     3661 acgtctcgac tcttcgatga cgtctttcat gaaggcctgg gtggtcgtgt ccttgacaac
     3721 ctcggccgtc gtcgttgctc cgccgttttg cagcatatct tcctactcaa caggccgcgc
     3781 cggccccaat atcagagttc ctgccgaatt agatggttat cggcgaatgg aatgcaatca
     3841 tcatggcatg gtcggggcct gtcctgaaag gcgctcgatc cggggtatat gcccggtcga
     3901 ttcgaggaat ttcacaaggt cttcgcggct tatcgaagtg gtcatggtgt tgaccagcgg
     3961 atgataattc agcgtcttct gctccatcat cgcagcatcg agaatcacag caacgcggcc
     4021 ctctgtgtca ttgatcgcgc cgaagggggt gacagccccc ggttctacac cgagcacctc
     4081 gcgcaggaga tcggatgacc cgaatgaaaa acggccgctg gcgcccagtc gtctatgcaa
     4141 acccttgagg tcgatatggg cttcttccaa agcgacgacc aaataaattg cgtatttttt
     4201 gtcgcgcaaa aacaaattct tggtatggcc gccgggaatt tgtccccgca gcgcccggga
     4261 ttgttcaacg gtgaacaaag gcggatgctt caccgttgag tgcttgatac ccaaggagtc
     4321 aaactcggcg aaaagctgtt ctggcgtttt cggcattccg gcaataatcc agcgaacgct
     4381 gtgttaatat ccgggggaga cccgatggag gtaaagatga tgcgcatttt gccggtcgcc
     4441 cgcctttact gcattcctga catttgatgc cggtccggct cgcgctgtcg aggggccctg
     4501 gtgtgcgttc gtcaacatcg gcacgggcaa tgtttatgaa gattgccggt attggtcttt
     4561 cgcggcgtgc cagcccaacg tcctcgccgg caatcgcggc ttctgcaatg tgaacccccg
     4621 atgggtcggg ccaccgccgc gcgtgcaggc cgggcgacgg atctatcgct attgagatga
     4681 cgcggcgcgg aaccgccgcg ccattgcaaa ggctggattt ttgtgcccct gcttcggcgc
     4741 gaaaattctt tgaaaagcct gctttgggct gctagaggat cgggcttgga gctttgactg
     4801 cctgtcgccg gttcgtctac cggtggccaa gcggttgaaa acgcgggtgt agctcagggg
     4861 tagagcacga ccttgccaag gtcggggtcg agggttcgaa tcccttcgcc cgctccaatc
     4921 atccttcctt cacatcggca atggtgccgc ctgtcagacg gaccagctcc gatggcgtgc
     4981 tgcgaaacac atgacgcggc cgagccggcc gcggcccaga tcgggtcgag cgtcatcaaa
     5041 tccgcatcga tgaacacccg cgggcgtccg atgtggccga cgggggccac gccgccaatt
     5101 gcgaatccgg tcgtgtcgcg cacccagcgt ccatcggcgg cttttgcctt gacgccaagc
     5161 gcgcgcgaaa ttttctcaac atcgacgcga ttgatgcccg acgttatgac caggacaacc
     5221 tggtcaccgg cgcgcaggac gatcgatttc gcaatctgtg cgacggtaca gccgactgct
     5281 gcggccgcgt cctgcgccgt gcgcattcca tccggaaaaa cctcgatcgt gtcgggatgg
     5341 ccagcttttt gtaacgccgc gcgcacgcgt tcaaccgaat ttccaatttc ggtcatcagg
     5401 ctagtatccc gccgccaggg aaccgcgggt gcgcctgtca gcggcgccca catatccgtt
     5461 cggcgtgata gcgatggaat tgacggcagt cagcggaatc gtcggcgaca ctttgtgacc
     5521 gcgtcttgca agggcatcaa gcacgtccgg cgcgacaccc ggctcgacaa tcacttcatc
     5581 gggttgccat tgatgatgca ggcgcggtgc gctcactgcc gcgtcgatcg gcatccggaa
     5641 atcgatggca ttcacaacta cctgcagcac cgtggaaata atacggctgc cgcctggaga
     5701 gccggtaatg agaaccggct tgccatcctt aagcacgata gtcggggtca tggacgacag
     5761 cggacgcttg cgcgggccgg gcagattgct gccgtaacct atcaacccgt atgcgtttgc
     5821 cgtacctggc ttggcagtaa aatcgtcaag ctcgttgttg agga
//
LOCUS       DATDHO010000746         4028 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_433006, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000746 DATDHO010000000
VERSION     DATDHO010000746.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4028
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_433006"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..648)
                     /gene="ribB"
                     /locus_tag="VIY07_14410"
     CDS             complement(<1..648)
                     /gene="ribB"
                     /locus_tag="VIY07_14410"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012455046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEY6382985.1"
                     /translation="MRDSHQRVEAAIKAFAKGEVVVVTDDDDRENEGDLFVAASHCTP
                     EKMAFIIRNTSGIVCAPLGAEQARRLHLEPMVAENEAPLGTAFTVSVDVRHGLTTGIS
                     AEERCNTVRALANDNSGASDFVRPGHVFPLVAREGGVLMRSGHTEACVDLCRLASLPP
                     VGVLAELMNDNGSVMRGPEVAAFAKKHGLMQVSIAELIAYRQSRDKLVERVGEFHV"
     gene            complement(670..1791)
                     /gene="aroC"
                     /locus_tag="VIY07_14415"
     CDS             complement(670..1791)
                     /gene="aroC"
                     /locus_tag="VIY07_14415"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEY6382986.1"
                     /translation="MSFNTFGHLFRFTSFGESHGPAIGCVVDGCPPRIPLSQEDIQRE
                     LDRRRPGQSRFTTQRQEPDTVRIMSGVFTDENTGAQVTTGTPIMLLIENVDQRPRDYS
                     EIKDKYRPGHAGYTYDVKYGIHDYRGGGRASARETAARVGAGAIARKIVPGLSVRGAL
                     VQMGPHKIDRARWDWNEIDKNPFFCPDAKQAKFFEEYLDGVRKAGSSCGAVIEVVAEG
                     VPAGLGAPVYAKLDGDLAAALMGINAVKGVEIGDGFATAAMSGIENADEMRMGNDGKP
                     LFLSNHAGGILGGISTGQAIVARFAVKPTSSILTPRKTVDRYGRDTDVVTKGRHDPCV
                     GIRAVPIGEAMVACVLADHYLMHRGQVGEGAAWPFKPGA"
     gene            2007..2666
                     /locus_tag="VIY07_14420"
     CDS             2007..2666
                     /locus_tag="VIY07_14420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382987.1"
                     /translation="MLIAEPTSIRYLEDVGLGDCLEFTIPTAGQKGSRHSSGTIQRTN
                     TMRKITAIAVALGFLTSVSLPAYATPAVSGIVKSDELSAAKKKKSAKKKDKKADLGVT
                     DLSAAKKKSAKKKDKKADLGLTDLSAAKKKKSAKKKDKKADLGITDLSAAKKKKKAKK
                     DEMKKSDLGTTDLSAAKKKKKAKKSEMKKSDFGTTDLSAAKKKKSKKKKSAEIVYRIA
                     A"
     gene            complement(2748..3347)
                     /locus_tag="VIY07_14425"
     CDS             complement(2748..3347)
                     /locus_tag="VIY07_14425"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEY6382988.1"
                     /translation="MPPPTIYYIRHGETDWNVAGRLQGRHDVPLNARGRKQANHCGNI
                     LRDRFSKIGRHPADFDYVSSPLGRACETMALVRPPLGLPPEGFRKDQRLAEIAFGKWE
                     GFTIAELRNRDPQRIATREHDKWHFVPPGGESYESVSLRMREWYEGLTRDTVAVAHGG
                     TARGLVAYLGIAKPAAAPLIDIAQGVVYVFEGDRLTRLA"
     gene            complement(3353..>4028)
                     /locus_tag="VIY07_14430"
     CDS             complement(3353..>4028)
                     /locus_tag="VIY07_14430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6382989.1"
                     /translation="KRVEPLAEEVDGLVVGHCDVTEPSSIDAVFAAVQSAWGSLDFLL
                     HAIAYSDKDQLDGRYIDTTEDNFIKTMVVSCYSFTALAQRAEKLMTNGGSLLTMSYYG
                     AEKWMPHYNVMGLAKAALECSVRYLAADLGVKNIRVNAISAGPLKTLAAAGIGDFRYI
                     LKWNEYNTPLRRNLTLEDVGKAGVYFLSDMSSGVTGEIHHVDAGYHIVGIKNPDAPDI
                     TLGKDS"
BASE COUNT          864 a         1241 c         1152 g          771 t
ORIGIN      
        1 gacatgaaat tcgccgaccc gctccaccag cttgtcgcgg ctctgtcgat aggcaatcag
       61 ctcggcgatt gaaacctgca tcagcccgtg ctttttcgcg aaggcggcga cttctgggcc
      121 gcgcatcacc gagccgttgt cgttcatcag ctcggccagc acgccgaccg gcggcaacga
      181 cgcgaggcgg cacaggtcga cacaggcttc ggtgtgtccg gagcgcatca gcacgccacc
      241 ctcgcgcgcg acaagcggaa acacgtggcc gggacgcacg aaatccgaag ccccgctgtt
      301 gtcgttggca agggcgcgca ccgtgttgca acgctcctca gctgaaatgc cggtggtcag
      361 tccatgtcgg acgtcgaccg acacggtgaa ggcggttccg agaggcgcct cgttttccgc
      421 caccataggt tcgagatgca ggcggcgcgc ctgctccgcg ccaagcggcg cgcagacaat
      481 gcccgatgta ttgcgaataa tgaacgccat cttttcgggc gtgcaatgcg aggccgcgac
      541 aaacaggtcg ccttcattct cccggtcgtc gtcgtcggtc acgaccacaa cctcgccctt
      601 ggcgaaagct ttgatcgcgg cttcgacgcg ttgatgactg tcgcgcacgg ctctacctcg
      661 aaggcggcgt cacgcgcccg gcttgaacgg ccatgccgct ccctcgccga cctggccacg
      721 atgcatcaga taatggtccg ccagtacgca tgccaccatg gcctctccga tcggcacggc
      781 gcggatgccg acgcagggat cgtgacgccc cttggtcacc acgtcggtgt cgcggccata
      841 gcgatccacg gtcttgcgcg gggtcaggat cgaggaggtc ggcttgaccg caaagcgggc
      901 gacgattgcc tgcccggtcg agatgccccc aagtatgccg ccggcatgat ttgacaggaa
      961 cagcggcttg ccgtcgttgc ccatgcgcat ctcgtcggca ttttcgatgc cgctcatcgc
     1021 agccgttgca aaaccatcgc cgatctcgac acccttgacg gcattgatgc ccatcagcgc
     1081 ggcggcgaga tcgccgtcga gcttggcgta aacaggcgcg cccaaccctg ccggcacgcc
     1141 ttcggcgaca acctcgatca ccgcaccgca ggacgaccct gctttgcgca cgccatcgag
     1201 atactcttca aaaaatttgg cttgcttggc atccgggcaa aagaacggat ttttgtcgat
     1261 ctcgttccag tcccaccgtg cgcgatcgat cttatgcggg cccatttgca ccaacgcgcc
     1321 gcggacactc agaccgggca cgatcttgcg ggctattgcg ccggcgccga cccgtgcggc
     1381 cgtctcgcgc gcagatgccc tccccccgcc gcgataatca tggatgccgt atttgacgtc
     1441 ataggtgtag ccggcatggc ctggccggta cttatccttg atctcggaat agtccctggg
     1501 gcgctgatcg acgttttcga tcagaagcat gatgggcgtg cctgtcgtga cctgcgcgcc
     1561 cgtattttcg tcggtgaaca cgccggacat gatcctcacg gtgtccggct cctgtcgctg
     1621 ggtcgtaaaa cgcgactgcc caggccgcct gcggtccagc tcgcgctgga tgtcttcctg
     1681 cgagagagga atccgcggcg gacagccatc caccacgcag ccaattgccg gcccatggct
     1741 ttcgccaaag ctcgtaaacc gaaagagatg accgaaagtg ttgaacgaca tggcgattcc
     1801 gcgctggtcg atttcgtaat gcacaccccc gcgccggtca aataagagac aaaccgaggg
     1861 tggggatttg caatctccac ttccccttcg ttttcagatt cagccttaaa gcgagatgcg
     1921 ctgaatggac attcacatcg ctgaacgaaa attaatggca agctgaatat ccgttaagct
     1981 acggaaaaat aaggcgtttt tccattttgc tgattgcgga gccaactagc atccgctatt
     2041 tagaggatgt tggtttgggg gattgcctgg agttcacaat tcccactgcc ggacaaaaag
     2101 gctcccgcca ttcgagtgga acgattcaga ggacaaacac aatgcgcaag atcactgcta
     2161 ttgctgtcgc gctcggcttc ctcacctctg tgagcctgcc tgcgtacgcg acaccggcag
     2221 tcagcggcat cgtcaagagc gatgagctgt ccgccgccaa aaagaagaag tctgcaaaga
     2281 agaaggacaa gaaggccgac ctcggcgtta ccgacctctc ggctgccaag aagaagtctg
     2341 ctaagaagaa ggacaagaag gccgacctcg gcctcaccga cctctcggct gccaaaaaga
     2401 agaagtctgc taagaagaag gacaagaagg ccgacctcgg tatcaccgac ctctcggctg
     2461 ccaaaaagaa gaagaaggcc aagaaggacg aaatgaagaa gtccgacctc ggcaccaccg
     2521 atctctcggc cgccaagaag aagaagaagg ccaagaaaag cgaaatgaaa aagtccgact
     2581 tcggcaccac cgatctctcg gccgccaaga agaaaaagag caagaaaaag aagtcagccg
     2641 agatcgtcta tcgcatcgca gcctgactct gatttcaaag cgcggcatca gcgcttttgc
     2701 gaacggccgg acaaaagtcc ggccgttttg ctttcctcca tcgacagtca tgcgagacgc
     2761 gtcaggcgat cgccctcgaa cacataaacg acgccctggg caatatcgat cagcggcgca
     2821 gcagccggct ttgcaatgcc gagataggcg acaagcccac gcgcagtgcc gccatgcgca
     2881 accgctacag tgtcgcgcgt gaggccctca taccattcgc gcattcgcag cgagacggac
     2941 tcgtaacttt ctccgcccgg cggcacaaaa tgccatttgt catgttcgcg ggtggcaatg
     3001 cgttgaggat cgcggttgcg caactcggcg atcgtgaaac cttcccattt tccgaaggcg
     3061 atctcggcca ggcgctgatc tttgcggaac ccttccggag gcaagccaag cggggggcgc
     3121 acaagcgcca tggtttcgca cgcgcgacca agcgggctcg aaacatagtc gaaatccgcc
     3181 ggatgtcgcc cgatcttgga gaaccgatcg cgcaaaatat tcccgcagtg attggcttgc
     3241 ttgcggccgc gagcgttgag tggcacgtcg tgacggccct gcaggcggcc ggcgacgttc
     3301 caatcggttt caccgtgacg gatgtagtag atcgtcggcg gcggcatcgc cgctagctgt
     3361 ccttcccaag cgtgatatcc ggcgcgtcgg gattctttat tcctacaata tgatatcccg
     3421 catcgacgtg atggatttcg ccagtcacgc cgctcgacat gtcggaaaga aaatagactc
     3481 cggctttacc gacgtcctcc aatgtcagat tgcgccgcag gggcgtgttg tattcgttcc
     3541 atttcagaat gtagcgaaaa tcgccgatcc ccgccgcagc gagtgtcttc aagggcccgg
     3601 cggatatcgc attgactcgt atgttcttga ccccaagatc ggcagcgagg tatcgcaccg
     3661 agcactcgag cgccgctttg gcaagcccca tcacgttata gtgcggcatc cacttctcgg
     3721 cgccgtaata gctcatcgtc agaagggacc cgccgttggt catcagtttt tcggcgcgtt
     3781 gggcgagcgc agtgaacgaa tagcagctca cgaccatggt cttgatgaaa ttatcttcag
     3841 tcgtgtcgat gtagcggccg tcgagttgat ccttgtcgga gtacgcgatc gcgtgaagca
     3901 gaaaatccag cgatccccag gctgattgga ccgccgcgaa cactgcgtcg atcgagcttg
     3961 gctctgtaac atcgcaatgg ccgacgacaa gcccgtcgac ctcctcggcg agcggctcca
     4021 cgcgcttt
//
LOCUS       DATDHO010000747         3876 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_186141, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000747 DATDHO010000000
VERSION     DATDHO010000747.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3876)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3876)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3876
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186141"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1599..2222
                     /locus_tag="VIY07_14435"
     CDS             1599..2222
                     /locus_tag="VIY07_14435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382990.1"
                     /translation="MADATGPDPAPATNGTEKPQSPVNAQTSQVTTAAQAAVEAPSSL
                     IVVTLALLTMVGPVFHAARWLHRRKASDRRGLGQAGPLTVLARTCPDSDSKTAARYIP
                     PPQLLKQAEKEVALALQQLLNDTQTKSHVESLDQKEQLAQELQQLLNEAQTKQRAKAR
                     GQTEQLAEALNILHDRASQRVERHHGPLASEEEPLRSRDLLLANQRN"
     gene            2346..2843
                     /locus_tag="VIY07_14440"
     CDS             2346..2843
                     /locus_tag="VIY07_14440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382991.1"
                     /translation="MFDFLRPKAEAKAPETLRRIPRKQLVAIMSGAKAAMGELTQLAK
                     RAKSQRDDHAIVQDELLELLRTLASTQKQIDAQMDSDIAKSTDISDTEWDRPSYNLFV
                     VPISQMANAPRVIVDSTLAASNNGVRDVKLLFDLVVAEMDVAIARFNVTLNSGLPHPW
                     QVEAQ"
     gene            3066..3728
                     /locus_tag="VIY07_14445"
     CDS             3066..3728
                     /locus_tag="VIY07_14445"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6382992.1"
                     /translation="MRRMLVVLFGAGVLLGGCMQSTIEPASEANLTPRDKKLLAAAPY
                     ASARIPQSYQRQIVDYHRKEGPGTILVDTDARYLYYVLPGGKAIRYGVTVGEEALAFS
                     GVAKVGRLTEWPSWVPTEEIKQRMHVPNFVGPGPQNPMGARAIYLYEGNKDTLYRIHG
                     TNQPEYIGHAISSGCIRMTNEDVIDLYKRVKIGTTVVVLGPYQGNSPFRLRLAAGRNS
                     LR"
BASE COUNT          898 a         1136 c         1099 g          743 t
ORIGIN      
        1 ccagggccat gacggcgata ccctcccctt tgcgccaaag gattgggcgg cagccgaagc
       61 tcaatctggc ggcgtggtgc gcgattcgtc tgctagacgc gatgctttcg atcagcgcat
      121 cggaacggtt cgggaaggat ctgatttttc cgatggcttg cgctctgttg aggggtcgat
      181 ccgtgtagcg tctcgccgca ctgacctcaa ggatcaggtt gcgagcggca gttcgtcgat
      241 tgccaagcga gcactccgcg ccgtcgctgc ctgtttcatt ggggccctaa ttggcgttgg
      301 aggctcatcc gtctggctgg cccgcagtga cggagctaaa gagattttca ggacctggac
      361 accggcgcta ggctcatcgt cctcaatttc aacgacgaag tactccccag caccaatgcc
      421 tgccgtgggc gcaacgtctt ctgaattggt gcacaagctt gaggcaatgc cgggcgatct
      481 cgcggtcgtg cggcgtagcg tagagcagct tactgaaaga caagaacaaa tggcccggaa
      541 cattgcagat ctgcggtctg ccgaacacga catcaaaaag aaaacgtcat ctcctcatct
      601 gcagcgcagg atgaaactca taccgtggcc cgaaacaagg ccgacaaccg tcgcaggctg
      661 gacacttcgc ggaattatca atggcacggc ggtcttggaa gggcctcata gcacttggag
      721 tgcgatgcaa ggagacactg tgccgggagt gggaagggtc gagtcgatgg tgcgttgggg
      781 cggtcgatta atagtcgcga ccagcagtgg actcatttcc acgccgtaac ctgctcaagc
      841 ggcagcttac attccatccg agtgcagagc atcgcgctgg cgatgaatag attgctcaac
      901 cttccgaacg cggcgcgcaa gccaaccacg tcgcgagcgc gctcctttga gtgtcaggag
      961 tgaatcgtcg gtagcattac actgataaag gcgagcagga gccatttcgc gcccgaaacg
     1021 cactcgccgc cgatcgcaac ctgtggacaa ctcaaacgtt ctagcagctg gtcgaatttg
     1081 cgacgaatta cagccccaat cccgaccaat cggcgattca catctgcgct actcggacgt
     1141 acagcgttac tcgaacgccg agggaggcat ggatgcaaca gcacaggcta acattggtgc
     1201 tgccaatgtt tggtcttttt ttggtggccg catcaacgag caacgtgaac gccgccagct
     1261 gtatcgccaa accgaacgga caggcgcccc agggccaaca ctggttttat cggaccgatc
     1321 gcgtcaccca tcgccaatgc tggtatcttg cgccgcagaa cggcgacgct cagaaaagcg
     1381 cgacaaaaca actatccagt acacgcaaac tgccggcggc gccacgacat gcacaccgac
     1441 cgacagcagc ggcgccacca gcggcgcatg ctgcaagcgc ggccgagaca gatgttcccc
     1501 caccggcagc tgcgacactc gccgaggcgg ccaaattgcc agacgcgccg ccatcgttcg
     1561 cacctgcgcc gcaatcgacg cttgcccagt catcaagatt ggccgatgcg accggccctg
     1621 acccggcgcc agcgaccaac ggtactgaga aaccgcaatc gccggtgaac gcgcaaactt
     1681 cacaggtcac taccgccgcg caggccgcag tcgaagcacc ttcgtccttg atcgtggtca
     1741 cccttgcgct gctgaccatg gttggccccg tgtttcacgc cgcgcgctgg ctgcatcgcc
     1801 gcaaggccag tgatcgacgg ggtctcggac aggcaggccc gctgaccgtc ctcgcgcgca
     1861 cctgtcccga ttcagattcg aagactgccg cacggtacat tccaccaccc caactgctga
     1921 aacaggcaga gaaagaggtt gcattagcat tgcaacaact cctaaacgac acgcaaacca
     1981 aatcgcatgt cgagtcgctc gatcagaaag agcaacttgc ccaggaattg cagcaactcc
     2041 tgaacgaggc gcaaacaaaa cagcgtgcca aggcccgcgg ccagacagag caacttgctg
     2101 aggcattgaa catcctgcac gaccgagcca gccagcgagt cgaacgacac cacggtccgc
     2161 ttgcctcaga ggaagaaccg ttacgaagta gggatctgct cctcgccaat cagcgcaatt
     2221 aatgggatgc cttcctagca aggcgtgaaa cgcaaccttt ctcagtttca ttttaagagt
     2281 ggtcgatgaa aatcccggat tgaagtgcta tcctattttt ttggacgcac cgaggtgcgc
     2341 cgggcatgtt cgattttctt cgccccaagg ctgaagccaa agcgccggaa acgttgcgcc
     2401 gtatcccgcg caagcaactc gtcgccataa tgagcggtgc caaggccgcg atgggtgagt
     2461 tgacgcaact agccaagcgg gccaagtcgc agcgcgacga tcacgcaatt gtgcaggatg
     2521 agttgctaga acttctgcgc acgcttgcct ctacgcagaa gcaaatcgat gcccaaatgg
     2581 actccgacat cgccaagtcc accgatatca gcgacaccga atgggaccga ccaagctata
     2641 atttgttcgt cgtgccaatc agccagatgg ccaacgcacc acgagtaatc gtcgactcaa
     2701 cacttgcggc ttcaaataac ggagttagag atgtgaaatt gcttttcgac ctagtagtag
     2761 ccgaaatgga tgtcgcgatt gcccgcttca atgtgaccct gaactcgggc ctgccgcatc
     2821 cttggcaagt cgaagcgcaa tagtccaacg caacaagtct cgccgtgggg ctatgaggaa
     2881 acaaatcctg tttgagctga tataggagac ggcattgccc ttaccaggtt attaactatg
     2941 agcgccggcg gtcctggcgt tgatttcaac aatatgttta cagttatggt aaaagctctg
     3001 ctaatgtctt gtgggcggtg gacgtaggga attcggtttc gctccgggga ggtaggggaa
     3061 gaataatgag gaggatgttg gttgtcctat ttggcgccgg cgttttgctg ggcggttgca
     3121 tgcagtcgac gatcgaaccg gcgtcggaag cgaacctgac cccccgcgac aagaaattgc
     3181 tggcggcggc accatacgca agcgcgagga tcccgcaatc ctaccagcgg cagatcgtcg
     3241 actatcaccg caaggaaggg cccggcacca tcctcgtcga taccgatgcg cgctatctct
     3301 attatgtgct gcctggaggc aaagcgatcc gctatggcgt gaccgtcggc gaagaagcgc
     3361 tggcgttttc gggtgtggcc aaggtcggcc gcctgaccga gtggccgtca tgggtaccga
     3421 ccgaagagat caagcagcgt atgcatgtgc cgaattttgt tggcccgggc ccacagaatc
     3481 cgatgggcgc gcgcgccatc tatctctatg agggcaacaa ggacaccctc tatcgcattc
     3541 acggcaccaa tcagccggaa tatattggcc acgcgatttc atcgggctgc atccgcatga
     3601 ccaacgagga tgtcatcgac ctgtacaagc gcgtgaagat aggcacaacc gtagtggtgc
     3661 tgggaccata tcaaggaaac tcgcccttca ggctgcggct ggctgcgggc cgcaattcat
     3721 tgcggtaacc aagacctgtg ttccaagtcg cgctcccgcg aaataaaggc ttatggcctt
     3781 gagtgccgct taatgcgcag cagaccgagc ccgtctttga aatagcacgt cccatatccc
     3841 atcaataacg cgagtggcgg cgggtgcctt cgaatt
//
LOCUS       DATDHO010000748         4882 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_234061, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000748 DATDHO010000000
VERSION     DATDHO010000748.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4882)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4882)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4882
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234061"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..295)
                     /locus_tag="VIY07_14450"
     CDS             complement(<1..295)
                     /locus_tag="VIY07_14450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382993.1"
                     /translation="MPDDTIIKLFEVERLCKPDLDVSYLTLKSDFDRSESVYTQKYVK
                     LANASLPGAVIIDEGETEIFNWDLFLILKYEQRWTPAGYGLGELIYTISLVPDE"
     gene            complement(841..1503)
                     /locus_tag="VIY07_14455"
     CDS             complement(841..1503)
                     /locus_tag="VIY07_14455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382994.1"
                     /translation="MAKKRKVATKRVTRKPARKRSASPDATINTLVILVVIVMMLGGL
                     FLYTQNKKQAALWPSIMEAIAKLPAPPLAAVIGDPVSTGSVQPSQPAIEAPRPTSAIE
                     APQPATVEAPRPTSAIEALQPTSTAEAPPPAPSIETSQSTSDDQTSQPEPGPATAQTT
                     GSFQAPKPQARAGAPEVTGSVQSAKRRVTTRKVRRPAPHVEPPQPSLLTDTVAARTPN
                     ID"
     gene            1745..2503
                     /locus_tag="VIY07_14460"
     CDS             1745..2503
                     /locus_tag="VIY07_14460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007562078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6382995.1"
                     /translation="MSQRVLITAGAAGIGREFARAFKANGAKVFVCDIDDKALAAIAK
                     ELPDVLASRRDMAMRAEIERMVPEAVEALGGLDVLINNAGIAGLTLPVDQMPPDEWDK
                     VVAVNLTAMFDVSRLAIPHLKNSKAGCIINMSSIAGRYGFPNRSPYAATKWAVIGLTK
                     TLAMELGEWGIRANAIAPGAVEGERIIRVFQGRAQLSGRSMQEVTTEAMAVQSIKSMI
                     DPKDIASLAVFLASDAAKSISGQVIPIDNDRYMP"
     gene            complement(2537..4171)
                     /locus_tag="VIY07_14465"
     CDS             complement(2537..4171)
                     /locus_tag="VIY07_14465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEY6382996.1"
                     /translation="MSSKVRTRWVVAATALILAASASVPAEAQFFWDRQGEWGDQQNQ
                     YRRARPQSGGFFQNWFGGQDNFHQREDEYSPRRPRQQQHVQQPAESSRPPAPRKSDSK
                     VATTSIVVIGDEMAEWLAYGLEEIFADSPEIGIVRKNKLYSGLLRYDSKGDLDWWHVA
                     RDMLTQEKADYVVMMLGIGDRQDIREKDLVKEAETRARDQQAKDEAEKKSGQKTAKPD
                     DTQEGGARAQPGKKAVGNADFRGDEWAKVYSRRIDDTIAALKSKGVPVIWVGLPSVRG
                     ARSTSDVAYLNDLYRARAERAGITYVDVWDGFVDESGKYSNYGPDYEGQVRRLRLSDG
                     VFFTKPGAIKLARYVDNELRRYMSNRVPVALPSGPAEPAPSAAKPAERPLQGPVVPLT
                     GGTPPKDSDQLLGGPGSSSIHGDATAVKVLAKGETVAPAPGRADNFAWPNGSAANQTP
                     AAAPPEAPVSDASANTKMPADATSALAAAPSDTKQQERKKGSTGKVTQHRPSKKPTPA
                     DNNSRRPQDGSWWSQDGAPRPPRPIGPSGGFFGNWR"
     gene            complement(4279..4584)
                     /locus_tag="VIY07_14470"
     CDS             complement(4279..4584)
                     /locus_tag="VIY07_14470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6382997.1"
                     /translation="MRFTSGQRLKNFMAASILSCLIAGAICALTSPVNSAAGVAISVN
                     RDVKGDRLPLVPAVQPSRRDSIKNEKPASKKNLVGCELAFSPFAHPAHAQIFTHCAA"
BASE COUNT          919 a         1456 c         1465 g         1042 t
ORIGIN      
        1 cctcgtccgg aacaagcgag atcgtgtaga tcagctcgcc caggccgtat ccagccggcg
       61 tccaccgctg ctcgtacttg agaatgagga agagatccca gttgaatatc tcggtctcgc
      121 cctcgtcgat gatgactgcg ccagggaggc tggcattggc cagcttgacg tacttctggg
      181 tgtagacact ctcgctgcgg tcgaaatcgg acttgagcgt caggtaagag acgtcgagat
      241 ccggcttgca aagacgctcg acctcgaaaa gtttgattat ggtatcgtcc ggcattgtgc
      301 gccccccggg caagtgctgt gctgaatgga acgccaccta ccgcaagtgc cattgaggtg
      361 gacattcaat ttaaactaga aaaatatctt tcatcgagtt ggacgtaggt ccaacctcta
      421 acgcgcacaa acaataggtc agaaatgttg tcgcagatgt ccgcttcggg tcacgagcag
      481 acatttagga ccaaacctgc agcgctcaat ttacctctga gagcaaaccg catgcggcaa
      541 agcagggcgt cggctggatg atgccgccat agaaaatgca gtcaccgagc atgcacgatg
      601 cctgcatggt tcgttatgtc gatttagttc gttacgccgc tactcaacag gcccacaaac
      661 tttgtcgttt gtggccccga atgtggcccc gaccagtttt tcggcctgcc tgccgatctc
      721 gggtttcagt ctaacatttt gaatttgttt ggttagcacg gctatcccga atcaacaaaa
      781 caactcttta ctgaatggtt ggcggatccg tggggttctt aattaacctg cgtgtcgcag
      841 ttagtcgatg ttcggcgttc gtgccgcaac ggtatcggtc agcagagaag gctgaggcgg
      901 ctcgacgtgc ggcgccggtc tacgcacctt gcgggtcgtt acccgtcgct tagccgattg
      961 cacgcttccc gtcacctcag gcgcgccagc gcgtgcctga ggcttgggtg cttggaagct
     1021 tccggtagtc tgagcagtcg caggtcctgg ctccggctgg gaggtttggt cgtcactggt
     1081 gctttgagat gtctcgatgc ttggcgcggg cggaggtgcc tccgcagttg acgtcggttg
     1141 aagcgcctca atagctgacg ttgggcgagg cgcctcgacg gtcgcgggct gaggcgcctc
     1201 aatggctgat gtcggccgag gcgcttcgat agcaggctga gacggctgca cgcttccggt
     1261 cgacacgggg tccccaatca ctgcagcgag aggcggcgcg ggcagtttcg caatcgcctc
     1321 catgatgctt ggccacagcg cagcctgttt cttgttctgc gtgtagagga acagcccgcc
     1381 gagcatcatg acgatcacga ccaggatgac cagcgtgttg atggtggcgt ccgggctggc
     1441 gctccgtttg cgcgccggtt tgcgtgtcac ccgcttcgtc gccacctttc gctttttcgc
     1501 catatcgtgc agctccctcg atggtgtggc cgactcacgg cactgcacct caatgtcgcc
     1561 tcacactgtt tcaatacaaa cccgctcccg ggccgagttg acccggtgcg caatatcaac
     1621 aaagacgcga atcactgcaa cgaggttagc tgattctcgc agccgatgtg tgaatgcggg
     1681 ggccgccaaa ctctctaagc cgttgttcgg gttgagacag tgtggtctta tcgcattggg
     1741 tatcatgtcg cagcgtgtat tgataacggc gggggccgcc ggcatcggcc gcgagtttgc
     1801 gcgagccttc aaggccaacg gcgcaaaagt cttcgtctgc gatatcgacg acaaggccct
     1861 tgctgcgatc gcgaaagaac tccctgatgt gcttgccagc cgccgcgata tggcgatgag
     1921 agccgaaatc gaacgcatgg tccctgaggc ggtcgaagcg ctcgggggcc tcgacgtgct
     1981 catcaacaat gccgggattg ccgggctgac gctgcccgtc gatcagatgc cgcccgacga
     2041 atgggacaag gtcgttgccg tcaatctcac cgcgatgttc gatgtgtcgc ggttggcaat
     2101 accccatctg aaaaactcga aggccggctg catcatcaac atgtcgtcga tcgcgggccg
     2161 ttacggcttc ccgaaccgta gcccctatgc cgccaccaag tgggccgtga tcgggctgac
     2221 caagacgttg gctatggagc tcggcgaatg gggcatccgc gccaatgcaa tcgctcctgg
     2281 cgcagttgag ggcgaacgca tcattcgcgt ttttcaggga cgggcgcagc tgagcggccg
     2341 gtccatgcaa gaggtgacaa ccgaggccat ggccgtacag tcgatcaagt cgatgatcga
     2401 tccgaaagac attgcgtcgc tcgcggtctt ccttgcttcg gatgcggcaa agtccatctc
     2461 gggccaggta atcccgatcg acaacgatcg ttacatgcct tgagcgctcg gactcgatcc
     2521 ggacggaggg aagcagctag cgccagttgc caaagaatcc gccggaaggt ccgatcggcc
     2581 ttggcggccg cggcgcgcca tcctgcgacc accacgaccc atcctgcggc cgacgtgaat
     2641 tattgtccgc cggggtcggt tttttcgatg gcctatgttg agtgaccttt ccggtgctgc
     2701 ctttcttgcg ctcctgctgc ttcgtatcgg agggggcggc ggccaaagcg ctcgtcgcgt
     2761 cggccggcat cttcgtgttg gcagatgcgt ctgaaaccgg agcttccggc ggcgcggctg
     2821 ccggtgtttg gttggcggcg ctcccgttcg gccaggcaaa gttatcggca cgccccggcg
     2881 ccggggcaac tgtctcgccc tttgccagga ccttcacggc ggtcgcgtcg ccatgaatag
     2941 agctgctgcc gggtccgcca agcaattggt cggagtcttt gggcggtgtc cctcccgtca
     3001 ggggaacgac aggcccctgc aatgggcgct ccgccggctt tgcagccgag ggcgccggct
     3061 cagccggtcc ggagggcagg gcgactggca cgcggttact catatatctg cgcaattcgt
     3121 tgtcgacata acgcgcgagc ttgatcgccc cgggtttggt gaagaacacc ccatcgctca
     3181 aacgcaaccg gcgcacctgg ccctcatagt cgggcccgta gttcgagtac ttgccggatt
     3241 cgtccacaaa gccatcccag acatcgacgt aggtgatgcc ggcgcgctcg gcgcgagcgc
     3301 gatagagatc gttgaggtag gcgacgtcgg aggtcgagcg tgcgccgcga actgacggta
     3361 gcccaaccca tatcaccggc acgcccttgc tcttgagagc cgcgatcgtg tcgtcaatgc
     3421 gccgcgaata gacctttgcc cattcatcgc cgcggaagtc ggcattgccg accgcctttt
     3481 tgccaggctg cgctcgcgcg ccgccttctt gagtatcgtc gggcttcgcg gtcttttgac
     3541 cggacttctt ttcagcctcg tccttggcct gttggtccct ggctcttgtt tccgcttcct
     3601 tgacgagatc tttttcccga atgtcctggc gatcgccgat gccgagcatc atcacgacgt
     3661 aatcggcttt ctcttgtgtg agcatatcgc gcgcgacgtg ccaccagtcg agatcacctt
     3721 tcgagtcgta gcgcagaagg ccggagtaaa gcttgttctt gcgaacgatg ccgatctcgg
     3781 gcgaatctgc gaagatttct tcaagtccgt acgcaagcca ttcggccatc tcgtcgccga
     3841 tgaccacgat cgaggtggtg gcgactttag agtccgattt gcgcggcgcc ggcggacgcg
     3901 aactctccgc cggctgctgg acgtgctgct gttggcgtgg ccgtcgtggg ctgtactcgt
     3961 cttcgcgttg atggaaattg tcttggccgc cgaaccagtt ctggaaaaag ccgcccgatt
     4021 gcggacgggc ccgccggtat tgattttgct ggtcacccca ctcgccttgc cggtcccaga
     4081 aaaactgggc ttccgccggc acactcgccg atgccgctaa aatcaaagcg gtcgccgcga
     4141 caacccaacg cgtacgcact ttgctggaca taattccgat tccgttagca ctcgatttcg
     4201 gccacattgg gccgccagca cgtcaatccg atgaagttcc aggctcgcgg aacgaccgga
     4261 acacggtagg aaatggcatc aagccgcgca gtgggtgaat atttgcgcgt gcgccggatg
     4321 cgcgaacggg ctgaaagcca gctcgcaacc aaccaggttt ttcttggacg ccggcttttc
     4381 atttttgatc gaatcgcgcc ggctcggctg aactgccggc accagcggta gcctgtcgcc
     4441 cttgacatct cgattgacgg aaatggcaac acccgccgcg ctgttcaccg ggctcgtcaa
     4501 agcgcaaatg gcgcccgcga tcagacagct caggatcgaa gctgccatga aattcttgag
     4561 tcgctggcca gatgtaaaac gcatggcatt gctccgacgc gcggcggtca atcaaaaagt
     4621 cagagcgttc aaaatcaaca gacctacgaa gacggccgtc agagaaaggc cgaatacttc
     4681 tgtcgttgca cgctcgctcg tcatgacgcc gctcccgcgt atccgggttt tagaggttgt
     4741 taactttctc aaggctagtg cgcgcaccaa cgctcgcacc agcatacgta ggtagccgcc
     4801 gggtatagga aaaagacgcc cgccctatac ctaggtacaa ttgcagtgcc gaaggcccac
     4861 gccgccgcta ccgcggcagt ag
//
LOCUS       DATDHO010000749         1556 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_478304, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000749 DATDHO010000000
VERSION     DATDHO010000749.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1556
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478304"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..935)
                     /locus_tag="VIY07_14475"
     CDS             complement(<1..935)
                     /locus_tag="VIY07_14475"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6382998.1"
                     /translation="MQFDQLQRREFISLLGGAVAAWPLAARAQQGERMRRIGVLHPQS
                     ADDPEGQARIAAFLQGLQQSGWEVGRNVRIEYRWTGGDAERMRKYAAELVALAPAVIL
                     APGSGTLGSLLQATRAVPIVFAVAADPVGAGFVASLARPGGNATGFTSFEYGIGGKWV
                     ELLKQIAPSVTRAAVIRDPAITAGIGQWGAIQTAAPSFGVEVTPVNVRDAGEIERDIT
                     VFARSPNGGLIVTGSALATIHRKTIITLAARHKLPTVYTGRHMVTSGGLISYGPDFLD
                     QFRRAASYVDRILKGEKPADLPVQAPTKYEMVINL"
     gene            complement(1356..>1556)
                     /locus_tag="VIY07_14480"
     CDS             complement(1356..>1556)
                     /locus_tag="VIY07_14480"
                     /inference="COORDINATES: protein motif:HMM:NF013736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY6382999.1"
                     /translation="EPRIRFYAGYPLVLDDGACIGTLCVFDTRPRFPEAADLARLHDL
                     AGLAVQEIQGMTADRLPRRQRR"
BASE COUNT          284 a          487 c          490 g          295 t
ORIGIN      
        1 ttgagattga tcaccatttc gtatttcgtt ggcgcctgca ccggaaggtc agcgggcttc
       61 tcgcccttga ggatgcgatc gacgtagctg gcggctcgcc ggaactggtc gaggaaatca
      121 ggtccatagg agatcaggcc gccgctggtg accatatgac gtccggtgta aactgtgggc
      181 agcttgtgtc gggccgcaag cgtgatgatt gtcttgcgat gaatcgtcgc caacgcactc
      241 ccagtcacga tcaggccgcc attgggagag cgcgcaaaga ccgtgatgtc gcgctcgatc
      301 tcacccgcgt cacggacgtt gaccggggtt acctccaccc cgaacgaggg cgctgctgtc
      361 tggatggcgc cccactggcc gatcccggcg gtgatggcgg ggtcccgaat gacagctgct
      421 cgcgtcacgc tcggtgcgat ctgcttgagt aattcgaccc atttcccgcc gattccgtat
      481 tcgaagctcg taaaaccggt ggcattgccg cctggccgcg ccaggctcgc gacgaagccg
      541 gcgccgaccg gatcggcggc gacggcgaac acgatcggta cggcgcgagt cgcctgcagc
      601 aacgacccca aggttccgct gcccggggcc aggatgacgg ccggcgcgag cgcgaccaat
      661 tctgccgcgt acttacgcat gcgctcagca tcgcctccgg tccagcggta ctcgatccgc
      721 acgttgcggc cgacctccca gccggactgc tgcagcccct gcaggaacgc agcaatgcgg
      781 gcctgtcctt ccggatcgtc agcggactgg gggtgaagca cgccgatgcg ccgcatccgc
      841 tcgccctgct gcgcgcgcgc cgcgagcggc cacgcggcta ccgcgccgcc gagcagcgag
      901 atgaactcgc gccgttgcag ttgatcgaat tgcattcgat tcccctgcca gccagggccg
      961 gatgcaggat atcgaactgg cgatgatcag tcagtaggta gtggaacgat tttacaacct
     1021 gttcgccgcc ggtgagggtg gccaatgtct cttgtgggtc ttggttgtgt gaaaaggcga
     1081 tcgcgcaaag aaccgataga aacaaccttc tttcggatcg cgattgacgt cgtgaagatt
     1141 ctcaagcgcg atcgattgtg atcggtctga gaaaaaccat tctcctcgtt ttccagtttg
     1201 cggcgttttc acacagccag ggtcattcgc gaccgggacc gcccgggccg ccaatcttag
     1261 cgcttccgca gtaccctaaa accggacgtg gattcaaggc tttgagtgcc gcaagccgtc
     1321 gagatctgcc ggactgcgcc cctttacgaa gagcctcatc ggcgctggcg ccgcggcaat
     1381 cggtccgcgg tcattccctg gatttcctga actgccaagc ctgccagatc gtgcaagcgt
     1441 gcgaggtcgg ctgcttccgg gaagcgcggg cgcgtgtcga agacgcacaa ggtgccgatg
     1501 caggcgccgt catcgagaac gagcggatag cccgcataga acctgatccg cggttc
//
LOCUS       DATDHO010000750         5134 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_478336, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000750 DATDHO010000000
VERSION     DATDHO010000750.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5134
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478336"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..467
                     /gene="purQ"
                     /locus_tag="VIY07_14485"
     CDS             <1..467
                     /gene="purQ"
                     /locus_tag="VIY07_14485"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase I"
                     /protein_id="HEY6383000.1"
                     /translation="GGLVLAVCNGFQIACEAGLLPGVLMRNSRLRFICRDIFLGVERS
                     DTPFTRGYNAGQVIRVPTAHGEGNYAADAETIARLEGEGRVIFRYVAPDGTRNEAYNV
                     NGSTNAIAGIVNERGNVLGMMPHPENHVEAAIGATDGRGLFAGLVDHLAKAA"
     gene            600..2810
                     /gene="purL"
                     /locus_tag="VIY07_14490"
     CDS             600..2810
                     /gene="purL"
                     /locus_tag="VIY07_14490"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEY6383001.1"
                     /translation="MTRNEPRITPELVAEHGLRPDEYERILKLIGREPSLTELGIFSA
                     MWNEHCSYKSSKVHLRTLPTKGPWVIQGPGENAGVIDIGDGLACVFKMESHNHPSYIE
                     PYQGAATGVGGILRDVFTMGARPIACLNALSFGSPSHPKTRHLVAGVVAGIGGYGNSF
                     GVPTVGGSVRFHPRYDGNCLVNAMAVGIARKDQIFYAAASGVGMPIVYLGSKTGRDGI
                     HGATMASAEFGEDSEEKRPTVQVGDPFSEKLLLEACLEIMQKGCVIAIQDMGAAGLTC
                     SAVEMGAKGDLGVTLDLDKVPCREEGMSAYEMMLSESQERMLMVLKPEKEKEAEAIFR
                     KWGLDFAVVGETTPTKRFVVRHGGDVMADLPIKELGDQAPEYKRPFVTGKKPQQVAAE
                     SVRAPVGMLEALEKLLATPDLCSKRWVWEQYDHIILGNTVQRPGGDAAVVRIEDGPKG
                     LALTTDVTPRYCEADPFEGGKQAVAECWRNLTAVGAKPLAITDNLNFGNPERPEIMGQ
                     FVGCIRGIAEACKALDFPVVSGNVSLYNETNGRAILPTPSIGGVGVIDDFKKSATLAF
                     KRPGETILLVGETTGWLGQSMYLREICGREEGAPPPVDLTEERENGDFVRALILDGVA
                     TAAHDIADGGLLVAVAEMAMASGIGAELAAAPSDIPAHAHWFGEDQARYVVTVPSEKI
                     EAVLAHARSANVPVWTIGTTGGDALTLSGEGPILVTILRERFESWMPAFMAGEL"
     gene            2833..3066
                     /locus_tag="VIY07_14495"
     CDS             2833..3066
                     /locus_tag="VIY07_14495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEY6383002.1"
                     /translation="MAMQAGEIERLIKAHIPDAQVTIRDLAGDGDHYAATVISASFKG
                     KSRVQQHQLVYEALKGQMGGVLHALALQTGTPG"
     gene            3063..3470
                     /locus_tag="VIY07_14500"
     CDS             3063..3470
                     /locus_tag="VIY07_14500"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY6383003.1"
                     /translation="MNSGRGVRVLAPEGAIAPTGTWSLGVRAGDFVFVAGMRGINPTN
                     NSLVQGEEARIRQAFMNMKRIAESEGARLADCVRLTVFVTDMSRLRPLVNKLQEELWS
                     GGPYPPRTIVEVAALNQDDFFEVEGTFYAPKTQ"
     gene            3561..3893
                     /gene="grxD"
                     /locus_tag="VIY07_14505"
     CDS             3561..3893
                     /gene="grxD"
                     /locus_tag="VIY07_14505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEY6383004.1"
                     /translation="MGIEQFIDNEVKGNDVVLFMKGTPQFPMCGFSGQVVQILDHLGV
                     AYKGINVLESDEIRNGIKSYSNWPTIPQLYVKGEFVGGCDIVREMFQAGELQQTLKDK
                     GVAVRQTA"
     gene            3907..4185
                     /locus_tag="VIY07_14510"
     CDS             3907..4185
                     /locus_tag="VIY07_14510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383005.1"
                     /translation="MVKFFLVLATVVDGALAALMVGVSGFFFGGGPESMRAGALAAAA
                     YFVAVVACLAAPVAGFILNRRGKAGAGLAVAWLPPAVALIALLIPAPY"
     gene            complement(4182..>5134)
                     /locus_tag="VIY07_14515"
     CDS             complement(4182..>5134)
                     /locus_tag="VIY07_14515"
                     /inference="COORDINATES: protein motif:HMM:NF012955.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6383006.1"
                     /translation="KSVRPRKLRHPMLNLNRRTVLAAAAGSLAARALPAFAASPYAFK
                     HGAFEVTVVSDGHLVLPTSFLAPGAPPAERQAILNAAGQTGDQYQSPTNITLVRSERD
                     LILIDMGSGDRFMPSAGKLWDNLKAAGIDKAKITKVVFTHGHPDHLWGTVDELDDLVT
                     PGASFFVAKAEWEFWHGEDATRGLPAERAGFVTGARRNYAAMKDKVTLVNAGDEIVAG
                     LRLIDTPGHTQGHVSLEFAGGDGVIVAGDVLTHPLISFQHPDWKPIADHVPDQAVATR
                     RKLLDRLVIDRSRLIGFHLPYPGVGLVERKDGAYRFVPAA"
BASE COUNT          979 a         1517 c         1680 g          958 t
ORIGIN      
        1 aaggcgggct ggtgctcgcc gtctgcaacg ggttccagat cgcttgcgag gcgggcctgc
       61 tccccggcgt gctgatgcgc aattcacgcc tcaggttcat ttgccgcgac atcttcctcg
      121 gggtggagcg ctccgacacc ccgttcaccc gcggctacaa tgcggggcag gtgatccggg
      181 taccgaccgc gcacggggaa ggcaactacg cagcggatgc agaaaccatt gcgcggctgg
      241 agggggaagg gcgggtgatt ttccgctatg tcgcgcccga cgggacgcgg aatgaagcct
      301 acaatgtcaa cggttcgacc aatgccattg ccggaattgt gaacgagcgt ggcaacgtgc
      361 ttggcatgat gccgcacccc gaaaaccatg tcgaagcggc aatcggcgcg acggacgggc
      421 gcgggctctt tgcggggctg gtcgatcatt tggcgaaggc ggcatgactt gttttccgtc
      481 atgcccggcc ctgtgccggg catccacgtc tttcaattgg gtgtcgggga ctacgatgtg
      541 gatggccggg acgagcccgg ccatgactac aaaattagcc gagtgaagaa gacaatactg
      601 tgacccgcaa cgaaccgcgc atcacgcccg agttggtggc cgagcatgga ctcaggcccg
      661 acgagtacga gcgcatcctc aagctgatcg gacgcgagcc gtcgctcacc gagctcggta
      721 ttttttctgc gatgtggaat gagcactgct cttacaagtc gtccaaggtg cacctgcgca
      781 ccctgcctac gaagggccca tgggtaatcc agggcccggg cgagaacgcc ggcgtcatcg
      841 acatcggtga tggcctcgcg tgcgtgttca agatggagag ccacaatcac ccgagctaca
      901 tcgagccgta tcagggcgcg gccaccggcg tcggcggaat tttgcgcgac gtattcacca
      961 tgggcgcgcg gcccatcgca tgcctgaatg cgctgtcgtt cggatcgccg tcacatccga
     1021 aaacgcggca tctggttgcg ggcgtggtcg ccggcatcgg cggctacggc aattcgttcg
     1081 gcgtgccgac ggtcggcggc tcggtccgct tccacccgcg ctatgacggc aattgcctgg
     1141 tcaacgcgat ggcggtcggc atcgcgcgca aggaccagat tttctatgcg gccgcttcgg
     1201 gcgtcggcat gccgatcgtc tacctcggct cgaaaacggg gcgggacggc attcacggcg
     1261 cgaccatggc ctcggccgaa ttcggcgagg actcggaaga gaagcgcccg accgtgcagg
     1321 ttggagatcc cttttccgaa aagctgctgc tcgaggcctg ccttgagatc atgcagaagg
     1381 gctgcgtgat tgccatccag gacatgggcg cagccgggct gacctgttcg gccgtcgaaa
     1441 tgggcgccaa gggcgatctc ggcgtgacgc tcgatctcga caaggtgccg tgccgcgaag
     1501 aggggatgag cgcgtacgag atgatgcttt cggagagcca ggagcgaatg ctcatggtgc
     1561 tcaagcccga aaaggaaaaa gaagccgaag cgatcttccg caagtgggga ctcgatttcg
     1621 ctgtcgtcgg cgaaacaacg ccgacgaagc gtttcgtcgt gcgtcacggc ggcgacgtca
     1681 tggcggatct gccgatcaag gagctcggcg accaggcgcc ggaatacaag cggccgtttg
     1741 tcaccggcaa aaagcctcag caagtcgctg ccgaaagcgt gcgcgcgccg gtcggaatgc
     1801 ttgaggcgct tgagaaactg ttggccacgc cggatctctg ctcgaagcgc tgggtctggg
     1861 agcagtacga tcacatcatt ctcggcaata ctgtgcagcg ccccggcggg gatgccgcgg
     1921 ttgtgcgcat tgaggatggg cccaagggtc tcgcgcttac gaccgatgtg acgccgcgtt
     1981 actgcgaggc cgatccgttt gaaggtggca agcaggcggt ggccgaatgc tggcgcaact
     2041 tgacggcggt gggcgcgaag cctcttgcca ttaccgacaa tcttaatttc ggcaatccgg
     2101 agcggccgga gatcatgggc cagtttgtcg gctgcatccg cggcatcgcc gaagcctgca
     2161 aggcgctcga tttccccgtc gtgtccggca acgtgtcgct ctacaacgaa acaaatgggc
     2221 gcgcgatctt gccgacgcct tcgatcggcg gcgttggcgt tatcgacgat ttcaaaaagt
     2281 ccgcgacact cgctttcaaa cggccgggcg aaacaatcct tctggttggc gagacgacgg
     2341 gctggctcgg ccagtcgatg tatttgcggg aaatctgcgg acgcgaggaa ggtgcccctc
     2401 cgcccgttga tctgacggaa gagcgcgaga acggcgattt cgtgcgcgcg ctgatcctcg
     2461 atggggtcgc aacggccgcg catgacattg ccgacggcgg ccttctggtt gcggttgcgg
     2521 aaatggcgat ggcttccggc attggcgcgg aactggccgc agccccctcc gacatccccg
     2581 cccacgcgca ttggtttggc gaagaccagg cgcgctacgt cgtcacagtg ccatcggaga
     2641 agatcgaggc tgtactcgcg cacgccaggt ctgccaacgt accggtgtgg actatcggca
     2701 caaccggggg tgacgcattg acgctgtcgg gcgagggccc catcctagtc acgattctgc
     2761 gagagcgttt cgaatcctgg atgccggcct ttatggccgg cgaactatga acgtcctcaa
     2821 gagggccggc cgatggctat gcaagccggt gaaatcgagc ggctgatcaa ggcgcacatt
     2881 ccggatgcgc aggtgacgat tcgtgacctt gccggcgatg gcgatcacta tgcggcgacc
     2941 gtcatctcgg catcgttcaa gggcaagtcc cgggttcaac agcatcagct ggtttacgag
     3001 gcactcaagg gccagatggg cggcgtgctg catgcgcttg ccctgcaaac cggcacacct
     3061 ggatgaattc cggacgcggc gttcgcgttc tcgcaccgga gggggcgatc gcgccgacgg
     3121 gcacctggag tctgggcgtt cgcgccggag atttcgtatt cgtcgccggc atgcgcggaa
     3181 tcaatccgac gaataacagt ctcgtgcaag gcgaagaggc ccgcatccgg caggcgttta
     3241 tgaacatgaa acgcattgcc gagtccgaag gcgccaggct cgcggattgc gtccgcctca
     3301 ccgttttcgt caccgatatg agcaggctgc ggcccctggt aaacaagctt caggaggagc
     3361 tctggagcgg cggcccttat ccgccacgca ccattgtcga ggtcgctgcg ctgaaccagg
     3421 acgacttttt cgaggtggaa ggcaccttct atgcaccaaa aacccaatga atcggcgaaa
     3481 ggctcttggg ttggcggcac cttctgggat acatatatcg ccgaataaag cggctgcgcc
     3541 gctgaacagg atgggattcc atgggcatcg agcaattcat cgataatgaa gtgaagggaa
     3601 atgacgtggt gctgttcatg aagggcacgc cgcaattccc gatgtgcggg ttttcgggac
     3661 aggtggtcca gatactcgac catctcgggg tggcctacaa aggcatcaac gtgcttgagt
     3721 ccgacgaaat ccggaatggc atcaagagct attcaaactg gccgacaatt ccgcagctct
     3781 acgtcaaggg tgaattcgtc ggcggctgcg acatcgtgcg cgagatgttt caggctggcg
     3841 agctgcagca gacactgaaa gataaaggcg tagccgtccg ccagaccgcc tgacgcgatt
     3901 ccgcccgtgg tgaaattctt tcttgtcctt gcgacggtcg tcgatggcgc gcttgcagcg
     3961 ctgatggtcg gcgtgtccgg attcttcttt ggcggaggcc cggaaagcat gcgggcaggt
     4021 gcgctggccg cggcggctta tttcgtcgcg gtagtcgcct gcctggcagc gccggtcgcc
     4081 gggttcattc tgaacaggcg agggaaagcc ggtgcgggat tggcggtggc ctggctgcct
     4141 cccgccgtcg ccttgatagc cctgcttatt cccgcgccct attaggccgc tggcacaaag
     4201 cggtaagcgc catccttgcg ctcgaccaac cccacgcccg ggtagggcag gtggaagccg
     4261 atcaacctgg atcggtcgat aacgagccga tccagcagtt ttcgccgcgt cgctaccgcc
     4321 tgatccggaa catgatccgc aatgggcttc cagtcaggat gctggaagga aatcagcggg
     4381 tgcgtgagga catcgccagc aacaatcacg ccgtccccgc cagcgaactc aagcgacacg
     4441 tgaccttgcg tgtggccggg ggtatcgatg aggcgcagcc cagcgacgat ctcatcgccc
     4501 gcgttcacca gcgtgacctt gtccttcatc gccgcgtagt tacggcgcgc gcccgtgacg
     4561 aaaccggcgc gctcggcagg caatccccgc gtcgcatcct cgccatgcca gaattcccac
     4621 tcggccttcg ctacaaagaa gctggcgccg ggcgtgacca gatcgtcgag ttcgtcgacc
     4681 gttccccaca agtgatcggg atggccatgc gtaaaaacca ccttggtgat cttcgccttg
     4741 tcaatgccgg cagccttgag gttgtcccac agcttgcccg cgctcggcat gaagcgatcg
     4801 cctgagccca tatcgatcag aatcaaatcg cgttccgagc ggaccagcgt gatattcgtc
     4861 ggcgattgat attggtcgcc ggtttgcccg gcggcattga gtattgcctg acgttcagcc
     4921 ggcggcgcgc cgggtgcaag aaagctggtc ggcaagacca gatgaccgtc gctgacgacg
     4981 gtcacttcga acgcgccgtg cttgaaagcg tagggtgacg ccgcgaacgc gggcagggcg
     5041 cgcgccgcga ggcttccggc ggcggcagca aggacagtgc ggcggttcag gttcagcatc
     5101 ggatggcgaa gtttgcgcgg gcgtactgat ttct
//
LOCUS       DATDHO010000751         4389 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_81977, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000751 DATDHO010000000
VERSION     DATDHO010000751.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4389)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4389)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4389
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_81977"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(118..609)
                     /locus_tag="VIY07_14520"
     CDS             complement(118..609)
                     /locus_tag="VIY07_14520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383007.1"
                     /translation="MRGSVSPGYVRWDGWQAGIQAGFGNMNADFGNSTSSLVAFILRN
                     STLEAEGGVSTWTTLPSNTTTGPVFGGFVGYNWQWSELVVGWDLAYKRPASLNSTASD
                     SLSRRFDTSDSVRHDVTTDAQTSFKLVDYATLRGRAGYAFGEFLPYAFLGAAVGASIT
                     RRP"
     gene            complement(975..2318)
                     /gene="glmM"
                     /locus_tag="VIY07_14525"
     CDS             complement(975..2318)
                     /gene="glmM"
                     /locus_tag="VIY07_14525"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEY6383008.1"
                     /translation="MVRRYFGTDGIRGLANRVITPELALKVGQAAGLVFRNGDHRHRV
                     LIGKDTRLSGYMIETALVAGFTSVGMDVLLTGPIPTPAVGMLARSMRADLGVMISASH
                     NPFDDNGIKLFGPDGYKLSDETEGRIEDLLDSDLGKQLAKSADLGRAKRIDGVQDRYI
                     EFAKLTLPKAVSFEGLRVVIDCANGAAYRVAPGTLWELGADVISIGVDPDGLNINKDC
                     GSTDLAALSRKVREMRADIGIALDGDADRVLIVDERGHVVDGDQLLAVIAESWKEDGR
                     LQRPGLVATVMSNLGLERHLAGLGLELVRTPVGDRYVLEHMRTHGYNVGGEPSGHIIL
                     SDYTTTGDGLIAALQVLAVVKRGDKPVSELCHRFEPLPQVMKNVRYKKGAPLDDAQVR
                     SVIASAERKLGHGGRLIVRPSGTEPVIRVMGEGDDRNLVEAVVDDVVEALSEVAA"
     gene            2563..3735
                     /locus_tag="VIY07_14530"
     CDS             2563..3735
                     /locus_tag="VIY07_14530"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY6383009.1"
                     /translation="MKTITCIEDLREDARRKVPKAFFDYVDSGSYNEETLRANRADLE
                     TIKLRQRVMVDVSERSLATTVIGQKISAPFALAPIGLCGMQHGDGEILAAQAAEEAGI
                     PFTLSTMSICSIEQVADATSKPFWFQLYVIRDRGFSRDILSRASAAKCNALILTVDLQ
                     VLGQRHRDIRNGMTVPPEMRLSNIIEIARKPRWALSILRSKSKTFGNLAGHLEGIEDI
                     TSLAQWTNNQFDPALNWKDVEWIKKVWPGKIIIKGILDVEDARTAVKLGADAIVVSNH
                     GGRQLDGAPSSISALPAIAQAVGSDTEVLFDGGIRTGADLLRALALGARACLIGRAYV
                     YGLGAGGKAGVAKAIDILQKELSVAMALTGTTRVSDVGPQVLVGVEAKKPARKRTS"
     gene            complement(3739..4227)
                     /gene="cynS"
                     /locus_tag="VIY07_14535"
     CDS             complement(3739..4227)
                     /gene="cynS"
                     /locus_tag="VIY07_14535"
                     /EC_number="4.2.1.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008824 - cyanate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanase"
                     /protein_id="HEY6383010.1"
                     /translation="MKRSDLTEKLLDIKREKGWTWKYICEQIGGMSPVMVTGGVLGQQ
                     KMTKPMAAAAAKLFGLSKTEEALLNEVPMRGAGTPMPPTDPLIYRFYELVMVNGPAWK
                     ALIEEEFGDGIMSAIDFDMTIERQPDPKGDRVRIGMTGKFLPFKYYGATGNALAYGLK
                     EA"
BASE COUNT          925 a         1364 c         1255 g          845 t
ORIGIN      
        1 tcgcgagacc ggcgacaaag acgttctttt gccccgagtt ggccgactgc ataaacgtgc
       61 caaggtcccc tggaacagga ggcgcaaccg taaggtctgt cataacgtcg gtcaccgtta
      121 cggtcgtctg gtaattgaag cgccgaccgc ggcaccaagg aacgcatagg gaaggaactc
      181 accaaacgca tatccggctc ttccccgcaa agtcgcatag tcaacgagct tgaacgaggt
      241 ctgcgcgtcg gtcgtcacgt cgtgccgcac gctatcggaa gtgtcgaatc tgcggctgag
      301 cgaatcgctg gccgttgaat tcaggctcgc tggacgcttg taggcgagat cccacccgac
      361 aacgagttcg ctccattgcc agttgtaacc gacgaacccc ccgaagaccg gaccggtcgt
      421 tgtattcgat ggcaatgtcg tccaggtcga tacgccaccc tccgcttcca acgttgaatt
      481 gcgcaggata aacgcgacca gcgaactcgt actgttgccg aagtcggcat tcatgttgcc
      541 aaagcctgcc tgaatgccgg cctgccagcc atcccagcgc acatagcccg gcgatacaga
      601 gccgcgcaaa acaggcgccg cccctggcca gtccgctgcc caagcgcgct caacggacgc
      661 agccgccagt actgaacaaa ttgcaatgga gagcaaaaat ttttgtgggc gcctgcgcag
      721 gccaacacgg aattgtagag tcgccccact catgaccaca gcccccattt ccacagtcgt
      781 gctggttgcg cacgacgccc gaacgggacg atggcagcaa aaccttaatc gccgcttaac
      841 cttgtttatt aactacgttc gttaattgat cttaacggcg caccccaagt gcctgaggcg
      901 caaggcataa acgcatccac gaattttaag aaatcattta cgacccggaa tgtgcgcgcg
      961 aatagatcag gatatcaggc tgcgacttcg ctcagcgctt cgacgacgtc atccacgacc
     1021 gcctcgacga gatttctgtc gtcaccctcg cccatgaccc ggatgacggg ctcggtaccg
     1081 gacggacgga caatcaaacg tccgccatgg cccagcttgc gttcggcgct tgcgattaca
     1141 gagcgcactt gcgcgtcatc aagtggcgca ccttttttgt agcggacatt cttcatcacc
     1201 tggggcaatg gttcgaaacg atggcaaagt tcggagaccg gcttgtcgcc gcgtttgacc
     1261 accgcaagca cctgcagggc ggcaatcagg ccatcaccgg tcgtcgtgta gtcggacaga
     1321 atgatatgac cggaaggctc gccgccgacg ttgtaaccgt gcgtgcgcat gtgctcgagc
     1381 acataccgat caccgaccgg cgttcgcaca agctcgagcc ccaggccggc aaggtgacgc
     1441 tcaagcccga gatttgacat cacggttgca accaagcccg gacgctgcag cctgccgtcc
     1501 tccttccagc tttccgctat gaccgcaagc agctggtctc catccaccac gtggccgcgc
     1561 tcgtcgacga tcagaacgcg atccgcatcg ccatcgagcg caatgccaat gtccgcgcgc
     1621 atttcgcgca ccttgcgcga aagcgcggca aggtcggtgg agccacaatc cttgttgata
     1681 ttcagcccgt cgggatcgac gccgatggaa atcacatcgg cacccaattc ccacaaagtg
     1741 cctggcgcca cgcggtaagc cgcgccattc gcacaatcga tgacgactcg aagcccttcg
     1801 aacgacaccg cctttggcaa tgtcagcttg gcaaactcga tgtagcgatc ctgcacgccg
     1861 tcgatgcgct tcgcgcgtcc cagatcggcg cttttcgcaa gttgcttgcc aagatcggaa
     1921 tcgagcagat cctcaattct gccttctgtc tcatcgctga gcttgtagcc gtctggcccg
     1981 aacagcttga tcccgttgtc atcgaatgga ttgtgtgacg ccgaaatcat gacaccgaga
     2041 tccgcgcgca tcgagcgcgc gagcatgccg acggcggggg ttggaatggg acctgtcagg
     2101 agcacatcca tgccgaccga cgtgaacccg gcgacgaggg cggtctcgat catgtagccg
     2161 gacagccgcg tgtccttgcc gatcagaacg cgatgccgat gatcgccatt cctgaagacg
     2221 aggccggcag cctgccctac tttgagcgcc agttccggtg taatcacgcg attggcgagg
     2281 ccgcgaatac cgtcggtccc gaaataacga cgaaccatga aacaatcccc gacgcccaaa
     2341 gatacaggtt acgcgctgat tagcgcgctt ttgacggacg gccaagcctc ctccaggcgc
     2401 ctgatattag ggccaagtga gtggaaatgc ctcaaaaatt gtgattggtc caccaggggg
     2461 tgcgttaacg ctaattccac ccgaccatct ggacaaaccg ccatttcgtc gtgcagcggc
     2521 cctgtgctac cgaattggtg atcaataccc aaaaccgttt ccatgaagac catcacctgc
     2581 atcgaagacc tgcgcgaaga tgcccgccgc aaggttccga aagctttttt cgattatgtc
     2641 gacagcggct cctataacga ggagacactg cgcgcgaacc gggccgacct tgagacgatc
     2701 aagttgcgcc agcgcgtgat ggtcgacgtg tcggaacgaa gcctcgccac aaccgtcatc
     2761 ggacagaaga tcagcgctcc attcgcgctc gcgccgatcg gattgtgcgg gatgcagcat
     2821 ggcgacggtg aaatactggc ggcgcaggcg gccgaagagg caggcattcc tttcaccctg
     2881 tccaccatgt ccatttgctc gatcgagcag gtggcggatg cgacctcgaa gccattctgg
     2941 tttcagctct acgtcatccg cgatcgcggc ttctcgcgcg atattctctc gcgcgccagc
     3001 gccgccaaat gcaatgcact gattctcacc gtcgatctgc aggtgcttgg ccagcgccat
     3061 cgcgacatcc gcaatggcat gacggtgccg ccggaaatgc gtttgagcaa catcatcgag
     3121 atcgcgagga agccgcgctg ggcgctcagc attctgagaa gcaaaagcaa gacatttggc
     3181 aatctcgcgg gccacctgga gggcatagaa gacatcacgt cccttgccca gtggaccaac
     3241 aatcagttcg atccggcgtt gaactggaag gacgtcgaat ggatcaagaa agtctggccg
     3301 ggcaaaatca ttatcaaagg cattctcgat gtcgaagatg ccaggacagc cgtcaagctc
     3361 ggcgcggacg ccatcgttgt gtcgaaccac ggcggacgcc agcttgacgg cgcgccctca
     3421 tcaatttcag ccctgccggc gatcgcgcaa gcggtgggat ccgataccga agtcctgttc
     3481 gatggcggaa tacggacggg tgccgacctg ttgcgtgcgc tcgcgctagg ggcgcgcgcc
     3541 tgtctgatcg gccgcgcgta tgtctacggg ctcggggccg gaggcaaggc cggggtcgcc
     3601 aaggcgatcg acattctcca gaaggagctc agcgtcgcga tggctctcac cggcacaacg
     3661 cgggtcagcg atgtcgggcc gcaggtgctc gtcggcgtcg aagcgaagaa acctgcccgc
     3721 aagcgcacca gctgacgctt aagcttcctt caggccatag gcgagcgcat tgccggtggc
     3781 gccgtagtat ttgaacggca ggaacttacc cgtcatcccg atcctgactc ggtcgccctt
     3841 gggatcgggc tgacgttcga ttgtcatatc gaaatcgatc gccgacatga tgccgtcgcc
     3901 gaactcttct tcgatcaggg ccttccaggc cgggccattc accatcacca gttcgtaaaa
     3961 acgataaatc agcggatcgg tcggcggcat cggcgtgccg gcgcctcgca tcgggacctc
     4021 attgagcagg gcttcctcgg ttttggacag accgaacagc ttggcggcgg cggccgccat
     4081 cggtttggtc attttctgct ggccgagcac gccgccggta accatcaccg gcgacatgcc
     4141 gccgatctgc tcgcagatgt atttccacgt ccagcccttc tctcgcttga tgtcgagaag
     4201 tttttcggtg agatcggacc gcttcatgat gtttcctcct caatagagat cagtgcgcag
     4261 ccgcttgctg gccgcggttt gctatcgccg atgcgtcctg cacggcggcg attgtgggtt
     4321 ctggcaggcc gggccgcacg aggggcacct cgcgcggatt gtgcgcgtcg cgagcctctc
     4381 cgatgaagc
//
LOCUS       DATDHO010000752         2645 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_384049, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000752 DATDHO010000000
VERSION     DATDHO010000752.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2645)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2645)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2645
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384049"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1074
                     /locus_tag="VIY07_14540"
     CDS             <1..1074
                     /locus_tag="VIY07_14540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HEY6383011.1"
                     /translation="ITDRLVHLSRAMVGNWPGSLAQINVLLSVFFAGISGSSTADAAS
                     QSKIFIEAQTKEGYDLSFSIAITAVSAVLAVIIPPSILMIVWGGVLTVSIGALYLAGI
                     LPGLLIAAAQMATVHVYAKIYNYPVYPRATLREFFCSAAQSVPALMTPFIIVGGILLG
                     WFTATESACVAVIYAAVLSIFIYREMDAKQLYHALAETGRLSAVALFCVGTASAFGWM
                     LAYYQIPRALLANVTAWDMGITGVGFFIAFVFLVVGCFLDAIPAIIIVGTTLEPLARS
                     VDMHPVQFAIIGIVSLAFGLVTPPYGLCLMISCAVARVRLRYALKDTMIMLVPMLLVL
                     TAIIIWPQIPLFLPRLISPEFLR"
     gene            1553..1765
                     /locus_tag="VIY07_14545"
     CDS             1553..1765
                     /locus_tag="VIY07_14545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383012.1"
                     /translation="MKKLDYATAIFRQVNKNEPFKHHDALEFPDGRIVLLTRLSEGQE
                     ATVLQLPAQPTTAAEADAQKHIAYTD"
     gene            complement(1840..>2645)
                     /locus_tag="VIY07_14550"
     CDS             complement(1840..>2645)
                     /locus_tag="VIY07_14550"
                     /inference="COORDINATES: protein motif:HMM:NF020119.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008239 - dipeptidyl-peptidase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CocE/NonD family hydrolase C-terminal
                     non-catalytic domain-containing protein"
                     /protein_id="HEY6383013.1"
                     /translation="PRVQLNIRHPGEKFVIRHEKDWPLPDTQWTKFHLVADAQKLMTK
                     APGGSAKVTFDAMDDGVTFLTEPMKEEIEVTGPVAAKLHVSSSTSDADLFLVLRVFSP
                     DMKEVVFQGALDPHTAIGQGWLRASHRKLDTKLTRPFRPYHTHDEKQHLKPGQVYELD
                     IEIIPTCIVVPKGHRIALTIRGRDYVYPGGSGGRLSNMKNEFTGNGPFLHDDPRDRPL
                     DVFGGKTTLHLDDGRENFVLLPIIPPRKAPPTKAKASRPAKRATKRGRR"
BASE COUNT          466 a          784 c          803 g          592 t
ORIGIN      
        1 atcaccgacc ggctcgtgca tctctcacgc gccatggtcg gcaactggcc gggatcgctc
       61 gcccagatca acgtgctctt gtccgtgttc ttcgctggca tctcgggctc ctccacagcc
      121 gacgccgcaa gccagagcaa aatctttatc gaggcgcaaa ccaaggaagg ctacgacctg
      181 tccttctcga tcgcgatcac cgccgtgtcg gcggtgcttg ctgtgatcat tccgccctcg
      241 atcctgatga tcgtttgggg cggcgtgctg acggtgtcga tcggcgcgct ctacctcgcc
      301 ggcattctgc cgggcctctt gatcgcggcc gcgcaaatgg cgaccgtgca cgtctacgcc
      361 aagatatata attatccggt ctatccgcgg gccacgttgc gcgaattctt ctgctcggcg
      421 gcgcagtcgg tgccggcgct gatgaccccg ttcataatcg tcggcggcat cctgctgggc
      481 tggttcaccg cgaccgaatc ggcctgcgtg gccgtgatct atgcggccgt gctgtcgatc
      541 ttcatctatc gcgaaatgga cgcaaagcag ctctaccacg cattggccga aaccggccgg
      601 ctttccgcgg tggcgctgtt ctgcgtcggc accgcttcgg cgttcggctg gatgctcgcc
      661 tattaccaga ttccgcgcgc gctgttggcc aacgtcaccg cgtgggacat gggcattacg
      721 ggagtcggct tcttcatcgc cttcgtcttc ctggtggtgg ggtgcttcct cgatgcgatc
      781 ccggcgatca tcatcgtcgg cacgacgctt gagccgctcg cgcgatcggt ggacatgcat
      841 cccgtgcaat tcgccatcat cggcatagtc tcgctcgcct tcgggctggt gacgccgccc
      901 tacggactgt gcctcatgat ctcctgcgcg gtcgccaggg tgcggttgcg ctatgcgctc
      961 aaagacacga tgatcatgct tgtcccgatg ctgctggtgc tgacggcgat catcatctgg
     1021 ccgcaaattc cgctgttcct accgcgccta atctcgccgg aattcttgcg ctgatacttc
     1081 tcactcagcg gccgcaagcg gcctgccgat gttctcgagg gacccccgct cggcggcgac
     1141 aatgctcgcc gcgggggcga atggtcttgt ggtcgctgaa tgtccgctat cggggtaaag
     1201 cggacagatc tcgaagacct gcaatgtcta tgccgagcga gtccggccga ccgcaacgtc
     1261 cagcttcgtt aagctagtga tgcgggatga ttgctaatgc gctaatgttt tgatggggct
     1321 gaaggggctt ccaaaaaggg agttcccgca aatgtgtgat tatagcatcc aaaatgtcag
     1381 gtcgcggccg gcaaggattg gcgacaaact aaccactcgt gacttcggta cctgcacgcg
     1441 tgggttcgct gcggcagaag atattggagt cgcggtttgc gttcttccag ggacggagct
     1501 tgcgttttcc aatgtagtga cacttacgga tcctttcatc ctggggtgga aggtgaagaa
     1561 attggattac gcgacggcaa tctttcgaca agtcaacaag aatgaaccat tcaagcacca
     1621 cgatgcgctc gaatttcctg atggacgcat agttctcctg acacgactaa gtgagggtca
     1681 ggaggcaacg gtgcttcaac tgccggcgca accaacgaca gcggccgaag cagatgctca
     1741 gaagcacatc gcctatacag actgatatcc gttctcggtg acgggcgaat gagcgggggt
     1801 tttccgacgc cctcgaagcg ggcgcagcgc gagccgtggc tacctccggc ccctcttggt
     1861 cgcccgcttt gctggcctgg atgccttggc ttttgtcggc ggggctttgc gtggcggaat
     1921 gatcggcagc aaaacgaaat tctctcggcc atcgtcgaga tgcagcgtcg tcttgccgcc
     1981 gaagacatcc agcggccgat cgcgcggatc gtcatgcagg aaaggtccgt tgccggtgaa
     2041 ttcgttcttc atgttcgaca gccggccgcc ggatccgccg ggatacacat agtcgcggcc
     2101 gcgtatggtc agcgcgatac gatgaccctt cggtacgacg atacaggtcg gaatgatttc
     2161 gatatcgagc tcgtagacct gtccgggctt taggtgctgc ttttcgtcgt gtgtatgata
     2221 gggccggaac ggccgcgtaa gcttcgtgtc cagcttgcga tgggatgcgc gcagccaacc
     2281 ttgtccgatc gcggtgtgcg gatcgagcgc gccctggaac accacttcct tcatgtcggg
     2341 cgaaaacacg cgcagcacaa ggaaaaggtc ggcatcgctt gtcgacgatg agacgtgcag
     2401 cttggcggcc accggccccg tgacctcgat ctcttctttc atcggctcgg tcaggaacgt
     2461 gacgccgtcg tccattgcgt cgaaggtcac cttggctgag ccgccgggag cctttgtcat
     2521 cagcttttgc gcgtcagcga cgagatggaa tttggtccat tgggtgtccg ggagcggcca
     2581 atccttttcg tggcggatga cgaatttctc acccgggtgc cggatattga gctgcacgcg
     2641 cggtt
//
LOCUS       DATDHO010000753         2442 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_234390, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000753 DATDHO010000000
VERSION     DATDHO010000753.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234390"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..652
                     /locus_tag="VIY07_14555"
     CDS             <1..652
                     /locus_tag="VIY07_14555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6383014.1"
                     /translation="DLGIPVGFWRSVGASQNAFITESFMDELAVAAGKDPFEFRRDLL
                     TKAARHKGVLELAAEKSDWGKPLPQGRFRGIAVAFSYGSYAAEVAEVSIEKDGKVRVH
                     RVVCALDCGTFVNPDTVKAQVEGSIVWGLTAALHGAITIDKGRVQQSNFHDYPMLRMN
                     EMPAVEVHIVPSNAPAGGVGEPGVPPLAPAVCNAIFAGTGKRIRKLPIRSEELRAS"
     gene            880..1926
                     /locus_tag="VIY07_14560"
     CDS             880..1926
                     /locus_tag="VIY07_14560"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383015.1"
                     /translation="MARFSHLLKRRLSFRFCLVTALAVHTFLGNASPIQAASAPTRVV
                     IGYPSPTPRVAPLWIAQDLDLFGKYGLTAQLVLVRNNQMLTAGLAAGDIDIGYTGGTT
                     VLGAAAAGVELKLIASFVSRGRGYLIVRPDIKKPADLAGKRIGVQSIGGTLWMYVMLT
                     LEQLGLDTTRDRIHLLVIGDQTIMGPALESQVIDAVVFTSRTYIPGLKQKGFSVLTEV
                     TPAMAATGIVARKSSLQKYPETFERITKALIEGEYYVLAPSNKSQVIKTIMTRLKLSD
                     PVPAEEGYADVVKEFEPKPYPSLDGIKNMQRLLALQNHRLADVNAANLMDTALMRKLE
                     DSGFLAQLQARYRE"
     gene            1994..>2442
                     /locus_tag="VIY07_14565"
     CDS             1994..>2442
                     /locus_tag="VIY07_14565"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6383016.1"
                     /translation="MSDLTAIDADGHIIEKESDIRKYLKEPWNRRSTPLRPGDQPWDN
                     HMFESFQSEQVWGKLSPREQVARWLELMDEHQMETAICFPTGSGSIVRLQEVPFQIAV
                     ARACNDHFAAEYNAHSDRVKCVGVLPMRSPQAAAEELERAVKELGIIG"
BASE COUNT          554 a          692 c          710 g          486 t
ORIGIN      
        1 agatttaggc attcccgtgg gcttctggcg ttccgtcgga gcgtcacaaa acgctttcat
       61 taccgagtcc ttcatggacg aactggccgt cgctgcaggg aaggatccct tcgagtttcg
      121 ccgtgacctg ctgaccaaag cggcgcgcca caagggcgtg ctggagctgg ccgcggagaa
      181 aagcgattgg ggaaagccgc tgccgcaggg ccgcttccgc ggtatcgccg ttgcgttttc
      241 ttacggcagt tacgccgccg aggtcgccga agtatccatc gaaaaagacg gcaaggtgcg
      301 agtccatcgc gtggtctgcg ccctcgactg cgggaccttc gttaatcccg acacagtcaa
      361 agcgcaggtg gaaggcagca tcgtttgggg tttgacggcg gctttgcacg gcgcgattac
      421 catcgacaag ggacgcgtgc agcaaagtaa ctttcacgat tatccgatgc tgagaatgaa
      481 tgagatgcca gcggtcgagg tccacatcgt gcctagcaac gcgccggccg gcggcgtcgg
      541 agaacccggc gtgccgcccc tcgcgccggc ggtatgtaac gccatcttcg ccggcaccgg
      601 caagcgcatc cggaaattgc cgattcgcag cgaagaactg agagcaagct gatcgtgggc
      661 cgataaaagc cttcgcccac gcacgcgatg acctaacaat agttttggtt caacgtcggt
      721 ctgcgcctag cgactccgaa ttggtggaac gctaaacaag aaactttggg cgggagctta
      781 gtaaaaagtc cagggtctta agcgacccaa gccgatgaca tagttccagc cgatgtcgag
      841 tggctttgtg tttgtctatt tggcgaaagg ggccgtacca tggcacgctt ttcccatctc
      901 ctaaagcgtc gcctctcatt tcggttttgc ttggtcacgg cgcttgcggt tcacaccttc
      961 ctcgggaacg ccagcccaat tcaggcggcg tccgcaccta cccgagttgt aatcggctat
     1021 ccaagtccaa cccctagagt cgcacccctc tggatcgccc aagacttgga cctctttggc
     1081 aagtacggcc tcacggcgca actggtgctg gtgcgcaaca accagatgct cactgcgggt
     1141 ctcgcagccg gtgacataga catcggctac acgggtggaa cgacggttct aggcgcggcg
     1201 gcagccggag tggagctaaa attgatcgcg agctttgtga gccgcggaag aggctatctg
     1261 attgtacgac cggatatcaa aaagccggcg gatttggcag gaaaacgcat tggcgtgcaa
     1321 agcattggcg gaactctatg gatgtacgtc atgctgacgt tggaacagct cggactggat
     1381 acgacgcgag accggattca ccttctggtg atcggcgacc aaaccattat ggggcctgcc
     1441 ttagaatcgc aggtgatcga cgcagtggtt ttcacttcgc gcacttacat tcccggcctc
     1501 aaacaaaagg ggttctccgt gttgacggag gtgacaccgg cgatggccgc gacggggatc
     1561 gtcgccagaa aaagctctct acagaaatat cccgagacct ttgagaggat caccaaggcg
     1621 ttgatcgaag gtgaatatta cgtcttggct cctagcaaca aatcccaagt gatcaagacc
     1681 atcatgacaa ggctcaaact ctccgaccct gtcccggctg aagaagggta cgcggacgtg
     1741 gtcaaggaat tcgaaccaaa accctacccc tctcttgacg gtatcaaaaa catgcaaaga
     1801 ctgttggcgc tccaaaatca ccggctcgcc gacgtcaatg ccgcaaatct catggacacc
     1861 gctttgatgc gaaagctcga ggacagtggc tttctggccc agctgcaagc gcgttatcga
     1921 gaatgaccat tcgaacactt gagtagacag cgccgtccaa gtcgggtaaa taaacgccgg
     1981 aaggagtgaa cccatgagtg accttactgc catcgacgcg gacggacaca tcatcgaaaa
     2041 ggaaagcgat attcgcaaat acttaaagga gccgtggaat cggcgctcga cgccgctgcg
     2101 gcctggggac cagccctggg ataaccatat gttcgaatcc tttcagtcgg aacaagtctg
     2161 gggcaagctt tccccgcgcg aacaagtagc ccgctggctc gagcttatgg acgagcatca
     2221 gatggagacc gccatctgtt ttccgaccgg ctccggcagt atcgtccggc tccaggaagt
     2281 gcctttccag atcgccgtgg cgcgcgcttg caacgatcat ttcgccgccg aatacaatgc
     2341 gcactccgat cgcgtcaagt gcgtcggtgt tttgccgatg cgttcgccgc aagccgccgc
     2401 cgaggagttg gagcgcgccg tgaaagagct ggggatcatc gg
//
LOCUS       DATDHO010000754         2825 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_478509, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000754 DATDHO010000000
VERSION     DATDHO010000754.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2825)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2825)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2825
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478509"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(281..505)
                     /locus_tag="VIY07_14570"
     CDS             complement(281..505)
                     /locus_tag="VIY07_14570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383017.1"
                     /translation="MIAKQRTDRFATSSRRPNVIADACRNACTAIIDDALSASDSIKQ
                     RSATRFIHPSVQRTAELGCTIQPPAAIKSP"
     gene            complement(502..1695)
                     /locus_tag="VIY07_14575"
     CDS             complement(502..1695)
                     /locus_tag="VIY07_14575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HEY6383018.1"
                     /translation="MSRLALEVADIFRTLGPAYRAREAGHLSFGQLCVMSAIEACRTA
                     ALGGHVTRCEDCTHIAIAYNSCRNRHCPKCQAAAAYDWLEARRSELLPVPYYHVVFTL
                     PAPIADIAYTNKAVIYDALFKAASETLLRIAADPKHLGAKIGVTMVLHTWGSALTHHP
                     HVHCVVPGGGLSADGASWISCKPNFFLPVRVLSRLFRRLMCQRLAAAHAKGALQFFAD
                     HAALRDADAFNAFLKPLRRSEWVVYAKPPFAGPDQVLSYLARYTHRVAIANSRLVAFD
                     GARVSFKWKDYRRQGEARYGIMTLDAHEFIRRFLLHVLPDGFHRIRHYGLFANPTRAD
                     NLAKAHALLADAALGTSTAAPEPRTSMTCPCCGGRMILIEVFECGAIPTACSHAPTPQ
                     WCDTS"
     gene            complement(1708..2367)
                     /locus_tag="VIY07_14580"
     CDS             complement(1708..2367)
                     /locus_tag="VIY07_14580"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY6383019.1"
                     /translation="MGRRDALEMIPLAREPKKLRQVLTLEEVARLIEAAPSRKYRCAF
                     SVAYGAGLRSSEVVSLKVSDIDSARMVLRIEDGKGSKDRLAKLSPQMLEELRAWWKIA
                     KPKVFLFPSRFKAADHISTRQYHRACREAAIRAKIDRSVHPHMLRHSFATHLLDRGVD
                     IRVIQTMLGHKKLETTAIYASVSSKLIQSVEGPLDQLPFKPIRKKRARRASAAMTAPP
                     V"
     gene            complement(2395..2619)
                     /locus_tag="VIY07_14585"
     CDS             complement(2395..2619)
                     /locus_tag="VIY07_14585"
                     /inference="COORDINATES: protein motif:HMM:NF024886.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase N-terminal SAM-like
                     domain-containing protein"
                     /protein_id="HEY6383020.1"
                     /translation="MTTQPITPLRKRMIEDMTIRRLKAGTQDFYQRAVAKYAQHFHRS
                     PAELDYEHVRQYQLHLIQSGFKPAYINHTM"
BASE COUNT          529 a          804 c          972 g          520 t
ORIGIN      
        1 agttgcgcac agaggtcttc gactgacacg accatggcgt caatcgccag aggcccttgc
       61 ggtcaatgtc cagtatgtcc accaacagcg gacgttcgag ctggcaattt cagacacccg
      121 acgtccggtt caccctgaaa gcggtcgatg cggcgaggct atgggagcgg cgattcatcg
      181 ctagcgttct tcggtgccgg ccctggcggg aacggagcgt gtggtttggg gccggcgtcg
      241 aagaacgccg agtgtaggaa accgcgggcg agcgcgccgt ctatggggat ttgatcgcgg
      301 ctggcggttg gatggtgcag ccaagttcgg cggtgcgttg aacgcttggg tggatgaagc
      361 gggtcgcaga gcgttgtttg atggagtcgc tggccgagag agcatcatca atgattgctg
      421 tgcaagcatt gcggcaggcg tccgcgatga cgttgggtcg tcgagaggat gttgcgaagc
      481 gatcggtccg ctgcttggcg atcatgatgt atcgcaccat tgaggtgttg gcgcgtgtga
      541 gcaggccgtc ggtatagccc cgcattcgaa gacctcgatg aggatcatgc gtccgccgca
      601 acacggacag gtcatggacg tccttggctc cggtgctgcg gtcgaggtcc cgagcgctgc
      661 gtcggcgagc aaggcgtgcg ccttggcgag attgtcggcg cgggtggggt tggcgaacaa
      721 gccgtagtgg cggatgcggt gaaagccgtc gggtaggacg tgcaataaga agcggcggat
      781 gaactcgtgt gcatcgaggg tcatgatgcc gtaacgggct tctccttggc gccgatagtc
      841 cttccacttg aagctgacgc gggcgccgtc gaaggcgacg aggcgggaat tggcgatggc
      901 aacgcgatgg gtgtagcggg cgagataaga gagcacctga tcgggaccgg cgaacggagg
      961 cttggcgtag accacccact cgctacggcg gagcggcttg aggaacgcgt tgaacgcatc
     1021 ggcatcgcgc agcgcggcat gatcggcgaa gaattgaagc gcgcctttgg cgtgcgcggc
     1081 ggcgagccgt tggcacatca gccgtcggaa cagccgcgag agcacccgca ccggcagaaa
     1141 gaagttgggc ttacaggata tccagctcgc gccgtccgct gagaggccgc ccccaggcac
     1201 cacgcaatgc acgtggggat gatgggtgag tgcggagccc caagtgtgca gcaccatggt
     1261 gacgccgatc ttggcgccga gatgcttggg atcggcggcg atgcgcagca gcgtctctga
     1321 ggcggccttg aacaaagcgt cgtaaatgac agccttgttc gtgtaggcaa tgtcggcaat
     1381 cggcgccggc agcgtaaaca cgacatggta gtacggcacg ggcaacagct cggaccggcg
     1441 cgcttcaagc cagtcgtagg cggccgctgc ctggcatttg gggcaatgcc gattgcggca
     1501 ggagttgtag gcgattgcga tgtgagtgca gtcctcgcag cgcgtgacat gcccgccgag
     1561 cgccgccgta cggcaggctt cgatcgccga catgacgcac agctggccga agctcaaatg
     1621 gccggcttca cgcgcgcgat aggctggccc caaggtgcgg aagatatccg ccacctccag
     1681 ggcgagacgg gacaagagct ccgccgatta gacgggcggc gctgtcatcg cggcggaggc
     1741 tcgtcgcgcc cgcttcttgc ggatcggttt gaaggggagc tggtcgagcg gcccctcgac
     1801 gctctggatc agcttcgacg agacagacgc gtagatcgcc gtcgtctcaa gtttcttgtg
     1861 acccaacatc gtctggatca cgcggatgtc gacgcctcta tcgagcaggt gcgtcgcgaa
     1921 cgagtgccgc agcatgtgcg ggtggacaga gcgatcaatc ttcgccctga tcgccgcctc
     1981 ccggcaggcg cgatgatatt gccgggtgct gatgtgatcg gccgccttga accggctggg
     2041 gaagaggaag actttgggct tggcgatctt ccaccacgcg cgcagctcct ccagcatctg
     2101 tggagagagc ttcgccaagc gatccttgct gcccttgccg tcctcgatgc gcagcaccat
     2161 gcgcgcgctg tcgatgtccg agactttgag cgaaaccacc tccgaggagc gcaggcccgc
     2221 gccgtaagcg acgctgaaag cgcaacggta cttgcgcgaa ggcgccgcct cgatcaggcg
     2281 cgccacttcc tccagcgtca gcacttggcg cagcttcttc ggctctcgcg caagcgggat
     2341 catctccaag gcgtcgcgcc ggcccatggt cactctgtag aaaaagcgca acgcctacat
     2401 cgtgtgattg atgtaggccg gcttgaaccc cgactggatc aagtgcagct gatattggcg
     2461 gacgtgctcg taatcgagct ccgccggcga gcggtgaaaa tgctgcgcgt acttggcaac
     2521 agcgcgctgg tagaagtctt gtgtgcccgc cttcaagcga cggatcgtca tgtcctcgat
     2581 catgcgcttg cgcagcggtg tgataggctg ggtcgtcatg ggggtgctcc cgtctcaggc
     2641 gcacctggcc aatcctggcg cgccggacca caggagacgc ccccatggcg tgaggcgcta
     2701 atctctcaga gaagtcctac cgcgagagcg gtttagtacc ttcgccaaca acggacggag
     2761 cagcttctaa tttgaacctt ccaagcttgg acgggccttc tgtatcggat gaatagtgat
     2821 ctcag
//
LOCUS       DATDHO010000755         4790 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_186615, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000755 DATDHO010000000
VERSION     DATDHO010000755.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4790
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_186615"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..197)
                     /locus_tag="VIY07_14590"
     CDS             complement(<1..197)
                     /locus_tag="VIY07_14590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383021.1"
                     /translation="MRSLTSPISSTDADRLWTASVVALASPVAWLAGRNDGLLGLVAV
                     VDRFEFELAAVDAAGAIGLFE"
     gene            complement(163..354)
                     /locus_tag="VIY07_14595"
     CDS             complement(163..354)
                     /locus_tag="VIY07_14595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383022.1"
                     /translation="MTRDFLGGLACLSGEAFHLLCHHGEPAARLSGAGGLDCRVQRKE
                     ICLRRDAADEIADFADLVD"
     gene            365..685
                     /locus_tag="VIY07_14600"
     CDS             365..685
                     /locus_tag="VIY07_14600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383023.1"
                     /translation="MSRPLRSVQAIKKIAATIEQLSEVANDVAVAMRQQDAVTQEIAR
                     NAGAAAKGTRDVSENITEVSNSAMKTGQVAATVLTAAGELADQSHLLRKEVERYLAQL
                     RVAS"
     gene            961..1836
                     /locus_tag="VIY07_14605"
     CDS             961..1836
                     /locus_tag="VIY07_14605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEY6383024.1"
                     /translation="MGQQATSLEILDQVRDLDDIEDMAVQLATLAGAEIVRTFGGIFT
                     VRYKTGDAGKLSVRDPVSEVDRHVEKLIRTRLAERFPSHDIIGEEMEERPGRDQDCVW
                     AVDPIDGTTNFVNGFPMFAASIGVLRRGVPIAGAVWCSVSHALRAGVYHAAAGGKLRF
                     EGDDVTPKVNADVLRRLAGVPIAADADEAGWETRKTGSAALECALVAAGLLEVARFAS
                     PNIWDVAGGIALVRAGGRVVREHDGMQWMPMERFAPVSRSGAAPDLRGWRRPIVVGTK
                     SGVETMCGKAEDSAQ"
     gene            complement(1869..2012)
                     /locus_tag="VIY07_14610"
     CDS             complement(1869..2012)
                     /locus_tag="VIY07_14610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383025.1"
                     /translation="MQKMSSVLAFVVSEGRVCALKPSDWSILLAGVVICGFATMVFLA
                     SGV"
     gene            complement(2141..2305)
                     /locus_tag="VIY07_14615"
     CDS             complement(2141..2305)
                     /locus_tag="VIY07_14615"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383026.1"
                     /translation="MRRALLILVFAALILLGSVVTGPGKPRGNIALMANPMQYPVPAY
                     VDISGIFHRR"
     gene            complement(2712..3158)
                     /locus_tag="VIY07_14620"
     CDS             complement(2712..3158)
                     /locus_tag="VIY07_14620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383027.1"
                     /translation="MMFDLSRAVKCGVAILAASFMLVATVLPSNAETGAVRFRVAKAG
                     FIVGAGGGSGTLVFRGRSYPLSIAGLSIGTIGAASADVVGRAYNLRQPQDIAGTYTAV
                     GAGVAVAGGGTAARLRNANGVVMELRGRQVGLEASLNLSGITVSMR"
     gene            complement(3234..4472)
                     /locus_tag="VIY07_14625"
     CDS             complement(3234..4472)
                     /locus_tag="VIY07_14625"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY6383028.1"
                     /translation="MLRRIATAGWRMRSLQGGGLFGLVAVLGAGISGCASLERLPAVT
                     YAQAKQADILDIADARFYVSETKQILDVAVKANQRRNLARGVSATRHFLAISGGGDDG
                     AFGAGLLVGWSDRGNRPEFDMVTGVSTGALSAPFVFLGRAYDPQLKAVYTETSASDIF
                     EKRSPLLGAIAGDALTDNTPLRQMISRRFDDEMVRRIAEEYKKGRLLFILTTNLDQGR
                     PVIWNIGAIASSNHPKARELIIEVLLASTSIPVVFPPVMLDVTVGGERYQEMHVDGGT
                     IAQAFLYPPSISLRTAALRTGVNEKILRTERRRVAYVIRNGRLTRPEESVKLQTIAIA
                     KEALSTMTTASGVNDTYRMYLLARRDGVDFNLAAIGDDFNVPYKGPFAPDYMQSLFEY
                     GYQKGRAGYPWQKTPPGYVN"
BASE COUNT          977 a         1499 c         1419 g          895 t
ORIGIN      
        1 cattcgaaga ggccaatcgc gccggcggcg tcaacggccg caagctcgaa ctcaaatcga
       61 tcgacgacgg ctacgagccc gagaagacca tcgttgcgac ccgcaagcca ggcaaccggc
      121 gaggccaagg ccactaccga cgctgtccaa agcctgtcgg cgtcagtcga cgagatcggc
      181 gaagtcagcg atctcatcag cagcatcgcg gcgcagacaa atctccttgc gctgaacgcg
      241 acaatcgagg ccgcccgcgc cggagaggcg ggccgcgggt tcgccgtggt ggcacaggag
      301 gtgaaaggcc tcgccactca gacaggcaag gccaccgagg aaatcacgcg tcacatcgta
      361 tctattgagc agaccactgc gctccgttca ggcaatcaag aagatagcgg caacgatcga
      421 gcaactcagc gaagttgcaa acgatgtcgc cgtcgcgatg cgccaacagg atgctgtaac
      481 tcaggagatt gcgcgaaatg ccggcgctgc ggcgaaaggc acgcgcgatg tctccgagaa
      541 cattacggaa gtgtcgaaca gcgccatgaa aaccggacag gttgcggcca cggtactgac
      601 cgcggccggc gagttggctg atcaatcgca cctgctgcgc aaggaagtcg agcgctacct
      661 tgcccagctt cgcgtcgctt cctgagacat cctcagtcgt gcccgcgctt gtcgcgggca
      721 tccacgtctt taccccgttg caacattgaa gacgtgaatg gccgggacaa gcccagccat
      781 gacgttctta caggattcag cttgcgcggg gacgaaccga atagacaatt gcctcgtcat
      841 tccgcggccc acagccggaa ccagcagaaa gcgtggccgt tattgcctta tgcggtcgct
      901 cctcgtccac aatccaactc agcatcctgc cgtccgcaag agcacgaatg gcggttgatc
      961 atgggccagc aggcgaccag cttggaaatt ctcgatcagg tccgtgatct ggacgacata
     1021 gaggacatgg cagtccagct cgcgacgctg gcaggcgccg aaatcgtcag gaccttcgga
     1081 ggcattttca ccgtgcgcta caagaccggt gacgctggga agctcagcgt gcgcgatccg
     1141 gtctcggagg tcgaccgtca tgtcgagaag ctcattcgca cgcgtctcgc agaacggttt
     1201 ccctctcacg acatcatcgg cgaggagatg gaggagcgtc ctggccgcga ccaggattgc
     1261 gtgtgggccg tggatccgat cgacggcacg accaatttcg tgaatggctt ccccatgttc
     1321 gcggcatcga tcggcgtgct gcgacgtggg gtgcctattg cgggcgctgt gtggtgttca
     1381 gtcagccacg cgctgcgcgc gggtgtttat cacgcggcgg cgggcggcaa attgcggttc
     1441 gaaggcgacg acgtcacgcc gaaggtcaat gctgacgtcc tgcgccgcct tgcgggcgtg
     1501 cccattgctg ccgatgcgga cgaggctggt tgggaaacgc gcaagaccgg ttcggctgcg
     1561 ctggagtgcg ccctcgttgc ggccgggctg ttggaagtgg cgcgcttcgc ctcgccgaac
     1621 atctgggacg tggccggagg catcgcgctc gtccgggccg gcgggcgcgt agtccgcgag
     1681 catgacggca tgcaatggat gccgatggag cgttttgcgc ccgtctcgcg atcaggcgcc
     1741 gcacctgatt tgcgcggctg gcgccgtcca attgtcgtcg ggacgaaaag cggcgtggag
     1801 accatgtgcg gcaaggccga agactcggca caatagccac tgatcatgca tcgattgccc
     1861 ggctcgggct ataccccgct ggccaggaag accatggtag cgaaaccgca gatcaccacg
     1921 ccggcgagca aaatcgacca atcggacggc ttgagcgcac acaccctgcc ttccgatacc
     1981 acgaaggcga gcactgaaga cattttttgc attttttgcc tccactccac tccaggcaac
     2041 tcaatttctt ccaggcaaac tagggcaagg cgggcggcat cactgtgatg cccgtcacca
     2101 atttcacgat tccggctacc gcctgtggac cgccgctccg ctagcggcgg tggaaaatcc
     2161 ctgaaatgtc cacgtatgcg gggacagggt actgcatggg attcgccatc aacgcgatat
     2221 taccgcgggg ttttccgggc cccgtgacga cactcccgag caggatcagg gcggcaaaaa
     2281 ccagaatgag cagggctcgt cgcatgtgag cctcctgtgc cggacgctcc ctatgccgaa
     2341 gtctcggtcc aagctccgga agattctgtg agaagcttca caaccgataa aaaaatcacg
     2401 ctggccaatg aggtattctc gcagggcaat gtacgccgac cagggcgtcc taaccctcga
     2461 gcagaattga tatttcccgc ggtccccgat ttgcgggcgt gagcgcgacc aagggaactt
     2521 ccgggcgcaa tacacgttgt atcgccgact gccggcctga tcccccttcc cccgcgccgg
     2581 cagctttgat gttgggccgc cgttctcgcg aacgcgcggc ccctttttta ggattgcgtg
     2641 ggacaacccc gccgggcctc tgtgggcgcg gcgggattgt caaattgtca tttgggaaga
     2701 ccgttagtcg cctagcgcat cgagacggtt atgccgctca gattaaggga ggcctcgagc
     2761 cccacctgcc gcccacgcag ctccatgacg acgccgttgg cattccgcag gcgtgcggcc
     2821 gtgccaccgc ccgcaactgc cacgccagcg ccgactgcgg tataggtacc ggcgatgtcc
     2881 tgcggctgcc gcagattata tgcacggccg accacatcgg cgctggcggc tccgatcgtg
     2941 ccgatgctca gaccagcgat gctgagcgga taggatctgc cgcgaaatac caacgtgcct
     3001 gagccgccgc cagcgccaac gataaagcct gccttggcga cgcgaaaccg cactgctcct
     3061 gtctcggcat tcgacggcaa caccgttgca accagcataa agcttgccgc caagatggcg
     3121 acaccgcact tcactgcacg agaaagatca aacatcatcg cctccctacc tttcataata
     3181 ctaacgaccg taacaccgac caccacacat ctccaaggtt gcaacaacac aacctagttc
     3241 acgtaaccgg gcggagtctt ctgccatgga tacccggcgc gacctttttg atatccgtat
     3301 tcaaacagcg actgcatgta gtccggggcg aagggaccct tgtaagggac attgaagtca
     3361 tcgccgatcg cagcaagatt gaaatccaca ccgtcccgtc tggcgagcag atacattcga
     3421 taagtgtcat tcacgccgct cgcggtcgtc atcgtcgata atgcctcctt ggcgattgca
     3481 atcgtttgca atttgacgct ttcctccggc cgcgttagcc ggccgttgcg gatcacgtag
     3541 gcaacgcgcc ttctctcggt tctcagaatt ttttcgttta ccccggtgcg cagcgccgct
     3601 gtcctgagtg atatcgaggg cggataaaga aaggcctgcg cgatcgtacc gccatcgaca
     3661 tgcatttcct ggtacctctc cccgccgacg gtgacgtcca gcatcaccgg cgggaacacg
     3721 acagggatcg aggtggatgc cagcaggact tcgatgatga gctcacgggc ctttggatgg
     3781 ttgctggagg cgatcgctcc gatattccag atcacgggac ggccctgatc gagattcgtc
     3841 gtcagaatga acagcagacg cccttttttg tattcttcgg cgatcctgcg caccatctcg
     3901 tcgtcgaaac ggcgtgagat catctgacgc agaggtgtat tgtccgtcag cgcgtcgccg
     3961 gcgattgcgc caagcagcgg cgagcgcttc tcgaaaatgt cgcttgcgct cgtttccgtg
     4021 tagaccgcct tcagctgtgg atcgtaggca cggccgagaa agacgaacgg cgccgacaat
     4081 gccccggtgc tgacgccggt caccatgtcg aattcgggtc tgttgccacg gtcgctccat
     4141 ccgaccagca atccggcacc gaacgcgccg tcgtcgccgc cgccggaaat ggccagaaag
     4201 tgacgggtcg cggaaacgcc ccgcgccagg ttgcgacgct gatttgcctt taccgcaacg
     4261 tcgagaatct gtttcgtttc gctgacataa aagcgcgcat ccgcaatatc cagtatgtcg
     4321 gcctgcttcg cttgtgcgta cgtaaccgcc gggagacgct cgagcgatgc acaaccgctg
     4381 atccccgccc ccagtacggc aaccagcccg aacaagccgc cgccttgcag gctgcgcatg
     4441 cgccagccgg cggtcgcgat tctcctgagc atctacgcta catccccgaa cctgcagcca
     4501 gtcagtatag gcgaacagcg gtgaggcaac aaaacggcaa acaaagcgat ggcagggcgg
     4561 tactgatgta ggccctcgcg cgccgcgctg gcgagccaag ctgcctttcg ccaccagagc
     4621 ctttccccta agctgatttg actgcgaata tcctcgatcg tggtcattcg cagttggggg
     4681 catcgtgtcg cgaattcatg tcgtggcaat cgtcattgtt gcgtcctgcg caccggcgat
     4741 tgcccaatcg cgccatccgc aatcgagtgc gtggatcgcc tattgcgttc
//
LOCUS       DATDHO010000756         7079 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_234437, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000756 DATDHO010000000
VERSION     DATDHO010000756.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7079
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234437"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..895
                     /locus_tag="VIY07_14630"
     CDS             <1..895
                     /locus_tag="VIY07_14630"
                     /inference="COORDINATES: protein motif:HMM:NF044969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase"
                     /protein_id="HEY6383029.1"
                     /translation="FPREMSKRYPDALHAHRLRREIIATQLTNSMINRGGATVIVRIA
                     DQTGAASPAIASAFAAVRNSYNLIELNSEIDALDNKISGKVQLDLYAALQDLLLDRLV
                     WFLRNVDLTQGLQKIIGRYREAVTQLESSLATVLSKSAAHAWEARVAALVGAGVPASL
                     AQRIGGLPLLKAAPDIALVADRAGKPVPEVAATYFATEAFFQLDRVTDAVSTITVSDY
                     FDRLALDRALDSIGDAERRLTAAMVGNGRAGVDAVEEWVRPRHAEVERIRSAIHEIAG
                     SGLTLSKLSVAASLLGDLARH"
     gene            complement(925..2517)
                     /gene="purH"
                     /locus_tag="VIY07_14635"
     CDS             complement(925..2517)
                     /gene="purH"
                     /locus_tag="VIY07_14635"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEY6383030.1"
                     /translation="MSSHPRRITRALLSVSDKAGLVAFATELARYKVELISTGGTAKA
                     LTDASLAVTDVSEVTGSPEMMDGRVKTLHPKVHGGLLAVRANKEHVAAMEKHHIKPID
                     LLVVNLYPFEATVAKEASFEDCIENIDIGGPAMIRAAAKNHMDVTVVVEAPDYEKVLG
                     EMAKNDGMVSLGLRQSLAAKAYARTAAYDAAISNWFADALQTDAPDYRAFGGRLAEAL
                     RYGENPHQSAAFYRSPGERYGVATARQLQGKQLSYNNINDTDAAYECVAEFDPRRTAA
                     CVIVKHANPCGVAEGDTLLDAYRKALACDATSAFGGIVALNRKLDADAARAITEIFTE
                     VIIAPEATEEAARIVAAKKNLRLLVAGGLPDPRAKGWTVKSVAGGLLVQSRDNAAVDE
                     MQLKTVTKRIPSETELADLRFAFRVAKHVKSNTIVYAKDRATVGIGAGQMSRVDAARI
                     AARKAEDAANEMKLPAPLTKGSVVASDAFFPFADGLLVAIEAGATAVIQPGGSVRDDE
                     VIKAADEHNIAMVFTGVRHFRH"
     gene            complement(2597..4348)
                     /locus_tag="VIY07_14640"
     CDS             complement(2597..4348)
                     /locus_tag="VIY07_14640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HEY6383031.1"
                     /translation="MRVSVAERARLSVLIGRRAFRSVLSSVNANPLLRWRFGSTKTDR
                     LLIAPQDLRTADATRASEIYAGRFAFAGKVVICDRRSPFEMTPPSDEWATTLLSFVWL
                     RHLRAADSGITRANARSLIDEWINVQGGWHPIGWRSDILARRLICWLSQAPFVLQDAD
                     ARFYRRFIRSLSRQVRYLRRNLNESREGLPRLQAVIALNYATLCMQGQSGHLRANVRR
                     LIDELRRQVLPDGGHISRNPGALIELLADLLPLRQLFAARQLQPPQALINAIDRVMPM
                     LRFFRHGDGNFAQFNGMGPTPVDLLATVLAYDDARGTPVSNAPHTGYQRIDAGQTALL
                     IDTGRAPPVDLSLEAHAGCLSFELSWKHHRLVVNCGLPTVNRENWRQVARATPAHSTV
                     TVNERSSCRFLESLSIRRLFRGTPIISGPHDVRVEREPGAVTLSASHDGYVADYGIVH
                     TRELQLNPDGLALDGEDIFTPAEGETFDASATGEFAIRFHLHPAIKASRLADGRGVIL
                     LLHDRDLWTFTTLAESVELEESVFLSGPDGPRRTAQIVIYGRVSQLGAVRWSFRHTPP
                     ASPGARPDRTQEPELPL"
     gene            complement(4454..5788)
                     /locus_tag="VIY07_14645"
     CDS             complement(4454..5788)
                     /locus_tag="VIY07_14645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEY6383032.1"
                     /translation="MARPRTSPQPEVPGLAARRIAADLLDGVLRRRMALDDLLSGKNL
                     HPGLPALADRDRALVRRLTATVLRRLGTLRHLLGGFLEKGFPSDAPRVETILLLGAAQ
                     ILWLEVPDHAAVDLSVRLAQADRRAARYAGLVNAVLRRVAQGGPSRPDGLRDTPEWLL
                     NRWSKSYGRDTARAIAAANGHEPALDLTAKSDSKSWADRLRGRVLPTGSVRTLAHGAV
                     SLLPGFSEGAWWVQDAAAALPVRLFGDIRGMNVADLCAAPGGKTAQLALAGANIIAVD
                     RSPARLNRLRENLARLSLHAETVAADVLEWQAGPFDAVLLDAPCSSTGTIRRHPDIPW
                     LKSEADLPVLTSLQQRLLDRAVELLKPGATLVYCVCSLEPEEGENQIEALLRRDPRIV
                     RSQITAQEVFGRKEFIAPDGALRTLPQYLPDPDPRWGGLDGFYASRLVRKAA"
     gene            complement(5908..>7079)
                     /locus_tag="VIY07_14650"
     CDS             complement(5908..>7079)
                     /locus_tag="VIY07_14650"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HEY6383033.1"
                     /translation="STGKPKGVLHTTAGYLASVALSHRAVLDYHPEDIYWCTADVGWV
                     TGHSYIVYGPLSNGAISVMFEGVPNYPSNSRFWEVCDKHKVNTIYTAPTAIRALMQGG
                     DEPVKKTSRKSLRLLGTVGEPINPEAWEWYYRVVGEGRCPIVDTWWQTETGGILITPL
                     PGAIRLKPGSATQPFFGVQPVIVDAEGKVQQGATSGNLCIADSWPGQMRTVYGDHQRF
                     VDTYFKTYPGKYFTGDGCRRDEDGYYWITGRVDDVINVAGHRLGTAEVESALVAHPKC
                     SEAAVVGYPHDIKGQGIYAYVTLMAGVQPSEELRKELVQWVRKEIGPIASPDLIQFAP
                     SLPKTRSGKIMRRILRKIAEDEFSNLGDTSTLADPAVVDDLVNNRQNKKAAKAGA"
BASE COUNT         1372 a         2164 c         2196 g         1347 t
ORIGIN      
        1 tttccccagg gaaatgtcaa aacgttatcc ggacgcgttg cacgcacacc ggctgcggcg
       61 cgagatcatt gcaacccagc tgacgaattc gatgatcaac cgcggtgggg caacggtgat
      121 tgtgcgtatt gccgatcaga ccggtgcagc ttcgccggct atcgcctctg cttttgccgc
      181 ggtccgcaac agctacaatt tgatcgaact aaacagcgaa atcgatgcgc ttgacaacaa
      241 gatctccggc aaggttcagc tcgatctcta tgcagcgctg caggatctcc tgctggatcg
      301 tctggtatgg ttccttcgca atgtggatct gacccaaggc ctccaaaaaa taatcgggcg
      361 ctaccgcgaa gccgtaaccc agctcgagtc ctcgcttgca actgtcctgt caaaatcggc
      421 cgctcacgcg tgggaggccc gcgtggcggc tcttgtcgga gcgggggtgc cggcgtcact
      481 cgcgcagcgc atagggggtt tgcctctgct caaggcagct cctgatatcg cgctggtggc
      541 ggaccgcgcc ggcaaacctg tacccgaagt agccgcgacc tatttcgcga ccgaggcgtt
      601 ttttcaactc gaccgcgtca ccgatgccgt ctcgactatt acagtgtccg actatttcga
      661 tcgacttgcc ttggatcggg cgcttgattc gatcggcgat gccgagcgtc gcttgacggc
      721 agccatggtc ggcaacggtc gtgcgggagt cgacgcggtt gaagaatggg ttcggcccag
      781 gcacgcggaa gtcgagcgca tccgctcggc cattcacgag atcgcagggt cggggctaac
      841 gctgtcgaag ctatcggtcg cggcgagcct gttgggcgat ttggcccgcc attagcgctg
      901 gcagccaggg acacgcttct gtcgctagtg ccggaaatgc ctgacgccag tgaacaccat
      961 cgcaatattg tgttcgtcgg cagccttgat gacttcgtcg tcgcgaaccg agccgccggg
     1021 ttgaatcacc gcagtagcgc cggcctcgat cgcaaccagc agaccatcgg caaacgggaa
     1081 gaaagcgtca gaagcgacca ccgagccttt ggtcaaaggt gccggaagct tcatttcgtt
     1141 tgcggcatct tcagctttcc gggccgcaat gcgtgccgcg tcgacgcggc tcatttgtcc
     1201 ggcgccgatc ccgacggttg cccgatcctt tgcatagacg atggtgttcg atttgacgtg
     1261 ctttgcaacg cgaaacgcga accgaaggtc ggcaagctcc gtttcgctcg gtatccgctt
     1321 cgtgacggtc ttgagctgca tctcgtccac cgccgcatta tcgcgcgatt gcacaagcag
     1381 gccgcccgcg actgatttca ccgtccagcc cttggcgcgc ggatcgggga ggccaccggc
     1441 aacaagcaac cgaaggtttt tctttgccgc gacaatcctg gccgcttcct ccgtggcttc
     1501 cggcgcaatg atcacctcgg taaaaatctc cgtgatggcg cgtgcagcgt ccgcgtccag
     1561 cttgcggttg agggcgacaa tgccgccgaa tgcagaggtc gcatcgcaag ccagcgcctt
     1621 gcggtaggca tcgagcaatg tatcaccctc ggcgactccg cacggattgg cgtgcttgac
     1681 gatcacgcaa gcggcggtgc ggcgcggatc gaactccgct acgcattcat aggcggcatc
     1741 ggtgtcgtta atattgttgt aggagagctg ttttccttgc agttgtctgg cggtcgcgac
     1801 gccatagcgc tctccaggcg agcggtaaaa cgccgcgctt tgatgcgggt tctcgccata
     1861 acgcagagcc tccgccaacc tacccccaaa ggcgcgatag tcgggggcgt ccgtttgcag
     1921 agcatcggcg aaccagttcg agatcgcggc gtcataagcc gcggtgcgtg cataggcttt
     1981 tgccgccaaa ctctgtcgaa gccccaggga aaccatgccg tcgttcttgg ccatttcgcc
     2041 aaggactttt tcgtagtcgg gagcttccac gacaaccgtt acgtccatgt gattcttcgc
     2101 ggcggcgcgg atcatcgcgg ggccgccgat gtcaatgttc tcgatacaat cttcgaagga
     2161 agcttccttg gcgactgttg cctcgaacgg gtagagattc accaccaaaa gatcgatcgg
     2221 cttgatgtgg tgcttttcca tcgccgcgac gtgctctttg tttgcccgga cagcgagcag
     2281 tccgccgtgc actttcgggt gcagcgtctt gacccgacca tccatcatct cgggcgagcc
     2341 tgtgacttcc gaaacatctg tgacggcgag actggcgtcg gtgagcgcct tggcggtgcc
     2401 gccggtcgaa atgagctcaa ccttgtaacg ggcgagctcg gtcgcgaacg caaccagccc
     2461 ggccttatcg gaaaccgaca gcagggcgcg ggttatacgg cgcggatggc tgctcatgcc
     2521 gcacgagcta gcatatcaag cgggcaaaag tgtattcgcg accttgtttc cgaaagcggc
     2581 atccacaagc atcgtctcac agcggcaatt ccggttcctg cgtgcggtcc gggcgggcgc
     2641 cgggggaagc cggcggcgtg tgacggaagc tccagcgcac cgcgccgagc tgactcacgc
     2701 gtccataaat cacgatctgt gctgtgcggc gcggtccgtc cggcccggac aggaatacgc
     2761 tttcttcgag ctccaccgac tcagccaagg tcgtgaaggt ccacagatct cgatcgtgca
     2821 gcaagaggat gacgccgcgg ccgtcggcca gacggctggc tttgatcgca ggatgcagat
     2881 gaaagcggat ggcgaattcg ccggtggcgc tggcgtcaaa cgtctcgcct tcggcgggcg
     2941 tgaatatgtc ctcgccgtcg agggcgaggc cgtcaggatt aagctgcagc tcacgggtgt
     3001 gtacgatccc gtaatcggcg acatagccat cgtgggaagc gctcaatgtt actgctcccg
     3061 gctctctttc aactcgcaca tcgtgtggac cggaaatgat gggcgtcccc cgaaaaagcc
     3121 gccggatcga tagggactca agaaaacggc acgatgagcg ctcgttgacg gtcactgttg
     3181 aatgcgccgg cgtcgcgcgc gcgacctgcc gccagttttc tctgttcacg gtcggcaatc
     3241 cgcaattgac caccaaccgg tgatgtttcc atgagagctc gaacgacaga cagccggcat
     3301 gcgcttccag gctcaaatca accggtgggg cgcgcccggt gtcgatcaga agggcggtct
     3361 gtcctgcatc gatgcgctgg tagccggtgt gcggtgcatt cgataccggg gtgcctcgcg
     3421 catcatcgta tgcgagcaca gtcgccagca gatcgacggg ggtgggcccc atgccgttga
     3481 attgtgcgaa attcccatcg ccatgcctga aaaaacgcaa catgggcatg acgcgatcga
     3541 tcgcgttaat gagggcttga gggggctgca gctggcgcgc ggcgaacagc tgccgcaggg
     3601 gcagcaagtc agccaacaat tctatcagtg cacccgggtt tcggctgatg tgtccgccat
     3661 cgggcaggac ttgcctgcgc aattcatcga tcaggcggcg tacgttcgcg cgcagatgtc
     3721 cggactgtcc ctgcatacaa agcgtcgcat agttcaaggc gataaccgcc tgcaggcgcg
     3781 gcaatccctc acgcgattcg tttaggttgc gacgcaaata gcgtacctgg cgcgacaggc
     3841 tgcggatgaa ccggcgatag aagcgagcat ctgcatcctg cagtacaaag ggcgcctgac
     3901 tgagccagca gatcagacgc cgtgcaagga tgtccgaacg ccagccaatg gggtgccagc
     3961 caccttgcac gttgatccac tcgtcgataa gcgaacgcgc attagcgcgg gtaataccgg
     4021 aatccgcagc gcgcaaatgc cgtaaccaga caaagctcag cagcgtcgtg gcccactcgt
     4081 ccgatggtgg tgtcatctca aagggagatc tgcggtcgca aatgacaact ttgccggcga
     4141 aagcgaagcg cccggcgtaa atttcactgg cgcgggtcgc gtcggcggtg cgcaaatcct
     4201 gcggcgcaat caacagacgg tcggtcttgg tcgagccaaa tcgccaccga agcagtggat
     4261 tcgcattaac gctgctaagt acgctgcgaa atgcgcggcg accgatgagt acggagagcc
     4321 tggcccgctc cgccaccgaa acccgcattg tcaaagtgct cgtctcctgc cgcgcgtgcg
     4381 aatccgtacg cgcaacccac acgatagcga agggtcgcga tacggccaat ggcaaaccgg
     4441 atcggatcgg ggatcaggct gcctttcgca caagccgcga ggcataaaag ccatcgagtc
     4501 cgccccagcg cggatccgga tcgggcaagt actgcggcaa agttcgcagg gcgccgtcgg
     4561 gagcgatgaa ttccttgcgg ccaaaaactt cttgcgctgt gatttgactg cggacgatgc
     4621 gaggatcgcg cctgagcaga gcttcaatct gattctcgcc ttcctccggt tccagcgagc
     4681 aaacgcaata gacgagcgta gcgcccggtt tgaggagctc gaccgcgcga tcaagtagcc
     4741 gttgctgcag tgacgtgagc accggcaaat cagcttcgct cttgagccaa gggatgtctg
     4801 ggtgacgtcg tatcgtgccg gtggatgaac agggcgcatc gagcaacacc gcatcgaatg
     4861 gcccggcctg ccattccagg acatcggctg cgactgtttc ggcatgcaga gacaggcggg
     4921 caagattctc acgaaggcgg ttgagccggg ccggcgagcg atcgacggca ataatgttcg
     4981 ccccagccag tgcgagttgc gcggtctttc cgccgggtgc cgcgcacagg tcggcaacgt
     5041 tcattccgcg aatatcacca aacagtcgaa ccgggagggc tgcggcggcg tcctgcaccc
     5101 accatgcgcc ttcagaaaat cccggcaaca gcgagaccgc gccgtgggcc aatgtgcgca
     5161 ctgagccggt cggcagcacc cggccgcgca gccggtcagc ccaggatttt gaatcgctct
     5221 tcgcggtgag atcaagcgca ggttcatggc cattcgcggc tgcaatcgca cgcgccgtgt
     5281 ccctgccata gctcttgctc cagcgattca acagccattc cggcgtgtcg cgaagaccat
     5341 cgggccgcga tgggccaccc tgagccacgc gccgcagcac cgcattgaca agtccggcgt
     5401 aacgcgctgc gcggcggtcg gcttgcgcca gccgcacgga caggtcgacg gcggcgtggt
     5461 ccggaacctc gagccacaga atttgcgcgg cgccgagcaa caagatcgtc tcaacacgtg
     5521 gcgcgtcgga cggaaacccc ttttcgagaa atccgccgag cagatggcgc aacgtgccga
     5581 gccggcgcag gacggtagct gtcagacggc ggaccaaggc gcggtcgcga tcggcaaggg
     5641 cgggcaggcc cggatgtaaa ttcttgccgg acaggaggtc gtccagagcc atgcgccgcc
     5701 gcagaacccc gtcgagaaga tcggcggcaa ttcttcgagc ggcgaggccg ggaacttccg
     5761 gctgtgggga agtgcgcgga cgcgccatac ccggatagtt gccgctaaat tgtgtcctcg
     5821 tcgcgaaact tcagcgaaaa acatcaataa cgcacagctt tgggtcaaaa acccgcagct
     5881 gcggcagcgg cccgcataaa cggcgcctca agcccccgct ttcgccgcct ttttgttttg
     5941 ccggttgttg accaggtcat cgaccacggc cgggtcggcc agtgttgagg tatctcccag
     6001 gttgctgaat tcgtcttcgg cgatcttgcg aagaattcgg cgcatgatct tacccgagcg
     6061 tgttttcggc agacttggcg cgaactggat caggtcgggc gaggcgatcg gaccgatctc
     6121 cttccgcacc cactgcacca gctccttgcg cagctcctcg ctgggctgca cccccgccat
     6181 caaggtgacg taggcgtaga tgccctggcc cttgatgtcg tgcggatagc cgacgacggc
     6241 ggcttccgag catttcggat gtgcgacgag cgcgctttcg acctcggcag taccgagccg
     6301 gtggcctgcg acattgatga catcgtcgac gcgaccggtg atccagtaat agccgtcttc
     6361 gtcgcggcgg cagccatcgc ctgtaaagta cttgcccgga taggtcttga agtaagtatc
     6421 gacgaaccgc tgatggtcgc cgtacaccgt gcgcatctgt cccggccacg agtcggcaat
     6481 gcaaagattg ccgcttgtgg cgccctgctg cactttaccc tcggcgtcca cgatcaccgg
     6541 ctgcacgcca aagaaaggtt gcgtcgccga gcctggcttg agtctgattg cgccgggcag
     6601 gggcgtgatg aggatgccgc cggtctcggt ctgccaccac gtatcgacga tcgggcaacg
     6661 accttctccg acaacgcggt agtaccactc ccatgcctcc gggttgatcg gctcaccgac
     6721 cgtaccgagc agccgcagcg atttgcgcga cgttttcttg accggctcat cgccgccctg
     6781 catcaacgcg cggatggcag tcggcgcggt gtagatggta ttgaccttgt gcttgtcgca
     6841 gacctcccag aaacgggagt tgctcggata gttgggtacg ccctcaaaca taaccgagat
     6901 ggcgccgttg gagagtgggc catagacgat gtaactgtgg ccggtaaccc agcccacgtc
     6961 cgccgtgcac cagtaaatgt cctcggggtg gtaatcgagc actgcgcggt ggctgagcgc
     7021 caccgaggcg aggtagcccg ccgtcgtgtg cagcacgccc ttcggcttgc ccgtggacc
//
LOCUS       DATDHO010000757         2304 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_234441, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000757 DATDHO010000000
VERSION     DATDHO010000757.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2304)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2304)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2304
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234441"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..248
                     /locus_tag="VIY07_14655"
                     /pseudo
     CDS             1..248
                     /locus_tag="VIY07_14655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003548801.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="BA14K family protein"
     gene            complement(450..1509)
                     /locus_tag="VIY07_14660"
                     /pseudo
     CDS             complement(450..1509)
                     /locus_tag="VIY07_14660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089417.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
     gene            complement(1563..2304)
                     /locus_tag="VIY07_14665"
                     /pseudo
     CDS             complement(1563..2304)
                     /locus_tag="VIY07_14665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763010.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
BASE COUNT          446 a          699 c          689 g          470 t
ORIGIN      
        1 acccgcaatc gcggccaaaa aattcgacgg aaacgaccgg cgccgccgtg cgggaggaca
       61 acgctaggca agtggccgcc aatccagcga acgcatcgaa ccgaaacgat aatccgcaac
      121 agacggcgca aggctcgtcg cgcaaccgct gcgacattct ggcctgcgca ggggcctatc
      181 gctcgttccg cgcaaacgac tgcacctatc agccgttcga cggtgggccg cgacgactct
      241 gcgaaaaatc tcccggacag ccgatggcgc gggaacagcc taatcgccgc cgctggggtg
      301 gcgatgcgca agcgcgctac ttggaccgcc ctacgtcggg acgcaggttc gttgacgagg
      361 acgatgatgt agccgccgac ttcgacgacg ctcgtcgcga gccgttgggc ttcttcctct
      421 tcggcagggg ccctcgctgg tagcgcgaac tacatgccct tttgcggggc gctggcaaga
      481 aattcctgaa gcgcctgctt gtagaacctg gcattcgccg tcgttccgtg gcctgaggtt
      541 tgttcgctcg ccggaatcaa aagcagtttt ccgttcttga ggcgcttcat tgcagtttcg
      601 gtgattccgg tttcaggcgg gttgcgttcg tcatcagcgg cgttgatcag caacagcggt
      661 gcttcgattt tctcgagatc cggcgacgga tcgtaatcag ctgacgatcc ccactgccac
      721 aggaagtcat tcgcgtccgc cgtcatcggc gcagcaagcc tggcatccac cagtttgtcg
      781 gcatgggcgc gggtcggcgc ctgcttctgg tagttgagcg tgccgcccga ggtggcaaaa
      841 gcaaagaacg cgctggcgat cttcatcgaa ttcggctgct tggtgtaatt gccattggcg
      901 tattcgggat cctggcggat cgactccagc atgatccggc gcaagatcca gttgcgcgac
      961 gccattgcgg ttggctggca agccataggc accagcgcat cagtagccgg gatacttttc
     1021 accccacagc caggtgctca tgccacccat cgaattgccg ataatcaggc gcacgtgctt
     1081 gatgccgagc ccttccgcaa ccaggcggta ctgcgcatcg accatgtcgg catagttgta
     1141 ttgcggaaat ttggttttca gtccgtcgga cggctttgtc gatttcccgt ggccgagtgc
     1201 gtcgggaatg atgatgtagc atttttcggc atcgagcggt tgcccgggcc cgaacaattc
     1261 gccggcaaaa gcgggcgtca gcatgctctg accggaaccg ccggtcccat gcagaacaac
     1321 aatcggaatt ccgtccggct tgccgatcgt cctgtagtgg aggcgcacct cgggcagaac
     1381 ctcgccggtg tggaatttga agtcgcgcgc gacccaatcc ccttccttcg gcgccggata
     1441 gtcggcggca ccagcggcga aagagaacgt cacaaagacg aaaagagcag cggctctgag
     1501 aaagatcatg gcgtttcctc gatttgtatt ttcaggtgat ggtcaagttg cctcgccttg
     1561 gttcaataga tcacaacgct gcgaatcgat tttccttcgt gcatcaggtc gaaagcatca
     1621 ttgatctgat cgagcggcat ggtgtgggtg atcagatcgt cgatattgat ctttccttcc
     1681 atgtaccagt cgacgatctt ggggacgtcc gtgcgcccgc gcgccccgcc gaacgccgtg
     1741 ccgcgccaca cccgtcccgt aaccagctgg aacgggcgcg tggaaatttc ctggccggct
     1801 ccggccacgc cgatgatgat actctcgccc cagccgcggt ggcagcattc cagggcctgc
     1861 cgcatggtgc cgatgttgcc gatgcattcg aacgagaagt cggcgccccc gccggtcaaa
     1921 tcgatgaccg cctgcacaac cttgtcgcgg ccgatctcgt cggggttgat gaagtcggtc
     1981 atgccgaatt tctcggccat ggatcgcttg gccgaatttg tgtcgatgcc gacgatcttg
     2041 tcagcgccga ccatgcgcgc accctggatc acgttcaggc caatgccgcc aaggccaaac
     2101 acggcgacgt tcgcgcctgg ccagaccttg gcggtgttga tgacggcgcc cactcccgtc
     2161 gttacgccgc agccgatgta acagatcttg tcgaacggtg cgtcttcgcg aaccttcgcg
     2221 agcgcaatct ctgggcagca cggtaaaatt cgaaaaagtc gagcagccca tgtagtggaa
     2281 gaccggatcg ccgtcgcatc gaaa
//
LOCUS       DATDHO010000758         1527 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_478571, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000758 DATDHO010000000
VERSION     DATDHO010000758.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_478571"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..408)
                     /gene="pgk"
                     /locus_tag="VIY07_14670"
     CDS             complement(<1..408)
                     /gene="pgk"
                     /locus_tag="VIY07_14670"
                     /inference="COORDINATES: protein motif:HMM:NF012389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEY6383034.1"
                     /translation="MTVASIDTIPPEELKGQPVLVRIDAEDEMKLRDSLPTLAFLAEA
                     SARVVVATHYGSGPDAPRLDAIGVRLGELLGRPVGKLDEWKGEAGLRAVGRLSEGEIM
                     MLENLAFEAGENAGDDRLADSLSQLVDIYCNDAF"
     gene            complement(512..>1527)
                     /locus_tag="VIY07_14675"
     CDS             complement(512..>1527)
                     /locus_tag="VIY07_14675"
                     /inference="COORDINATES: protein motif:HMM:NF037429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VLRF1 family aeRF1-type release factor"
                     /protein_id="HEY6383035.1"
                     /translation="ASLNDMLRSIETRLNGGQLQSFYADAERARRFVSGLEPQGNGLI
                     LFCDDSENFFWSREIKASVRNNARWSETAYIAPLLAILDEYERYGVILVDKAHARLFT
                     VFIGEIAEHYDALAPASVRHIKTSGTDHILSENRFQHKAAMHVHWHLKHVAEMLDKLV
                     DQYGFDRLLLAGPVEATSELQHLLSKRVRNRVIERLSLPMRAAEGEVLEEALRVERRV
                     EREMEKQIVEELIAGGDGHHPFTHGLERTVRALCEERIWRLVYADGFSPSGGQCANCG
                     MLFARTGGSCDYCGAAIKPVNDLLERVVQRVLEQDGKIEEVEGDAAMRLQEVGNIGAI
                     LRF"
BASE COUNT          324 a          500 c          391 g          312 t
ORIGIN      
        1 aaaggcatcg ttgcagtaaa tgtcgaccaa ttggctcagt gagtcggcca gacggtcatc
       61 gccggcgttc tcaccggcct cgaaggcgag attttccagc atcatgatct caccttcgct
      121 cagacggccg actgcgcgca ggccggcctc gcccttccac tcgtcgagct tgcccaccgg
      181 gcggccgagc agctcaccca accggacacc aatggcatcg aggcgagggg cgtccggccc
      241 cgagccgtaa tgagtcgcga cgaccacgcg cgcgcttgct tccgcaagaa aagcgagggt
      301 aggcagcgaa tcgcgcagct tcatttcatc ttctgcatcg atccgaacca gaacaggctg
      361 ccctttcagt tcttccggtg gaatcgtatc gatgctcgcc actgtcataa acacacctca
      421 gctacagcat gaagattgga gtagtggagt gatggagtaa tgcttcaaac ccaatactcc
      481 agtactccat cactccgatg ctccattcgt tttaaaatct taaaatcgcg cctatgttgc
      541 ctacctcctg gagacgcatc gccgcatcgc cctctacttc ctcaatcttg ccgtcctgct
      601 ccagcacacg ttgcaccacg cgctcaagca ggtcattcac aggcttaatc gccgcgccgc
      661 agtagtcaca agagccaccg gttctggcaa acaacatgcc gcagttggcg cactgtccgc
      721 cgctgggact aaagccgtcg gcgtagacca accgccaaat tcgttcctca cacaacgcgc
      781 gcaccgtgcg ctcaagcccg tgtgtgaacg ggtggtgccc atcccccccg gcaattagct
      841 cctcgacaat ctgcttttcc atttcccgtt ccactcgccg ctcaacccgg agcgcctctt
      901 cgaggacttc cccctcggcc gccctcatgg gcaaagacag ccgctcgatg acgcggttgc
      961 gcacgcgctt ggacaaaagg tgctgcagtt cgctggttgc ctcgacaggc cccgccagca
     1021 acagccggtc gaatccgtac tgatcgacaa gtttgtcgag catttcagcc acatgcttca
     1081 gatgccaatg cacgtgcatg gcggctttat gctggaaccg attttccgaa aggatatgat
     1141 cggtcccgct ggtcttaata tgtcgcactg acgcgggtgc cagcgcgtcg tagtgttctg
     1201 caatctcacc aataaaaaca gtgaacagcc gggcgtgagc cttatcgacg aggatgacgc
     1261 cgtaccgctc gtactcatcc agaattgcaa gcagcggcgc gatgtaagct gtctcgctcc
     1321 agcgcgcgtt gtttcgcacc gaagccttga tctcgcgcga ccagaagaag ttttcggaat
     1381 cgtcgcaaaa caggatcaat ccgttcccct gcggctccaa gccggaaaca aaccgccgcg
     1441 cgcgctcggc gtcggcgtaa aaactctgca actgccctcc gttcaatcgc gtttcgatgg
     1501 accgaagcat gtcgttgagc gacgcct
//
LOCUS       DATDHO010000759         2649 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_334952, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000759 DATDHO010000000
VERSION     DATDHO010000759.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2649
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_334952"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1389)
                     /locus_tag="VIY07_14680"
     CDS             complement(37..1389)
                     /locus_tag="VIY07_14680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383036.1"
                     /translation="MGQSRLSRRAILKTAALGSAAVITAPYVSGVHAAGSLTLGCWDH
                     WVPGANKTLDKICKEWGEKNKVDVHIDYITSQGEKDKLTAAAEAQAGTGHDIMSHRDW
                     NIQIHQRLLEPLDDVVGQLIKQYGPISPVAEYLAKIKGTWRGVPTAVGSQVKPCQSRL
                     DLYKEHCGVDLVDMFPADESKYDKAKTDKWTWDLYLECAQKLHKAGYPVGLPMGQTSD
                     AVDWVGALFKSFGVVMIDEKDNIKVNSNETRAALEYLKKLMAVNPPEVYAWDDAGNNR
                     WIISGKGSGIMNPPSSWAVAKRDNIKVAENIWHHAMPSGPKGRFVGQLPQFYGLWTFS
                     KNKSAGKDLLLHMSQKESMAQLVAASIGYDLPSFKSMYDFETWKTVEPPKGVVYSYPP
                     RADEQTSMFGAPARSEVGAQMYNQAINTVMVSKFTQGNEKLDDVIKWAEKELEGALRA
                     "
     gene            1588..2433
                     /locus_tag="VIY07_14685"
     CDS             1588..2433
                     /locus_tag="VIY07_14685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEY6383037.1"
                     /translation="MENAVFLAVLFAAACHAGWNALIKVGLDPLSTTTLISVGAGLVA
                     FLFLPFVGMPAWAAWPWLIASIAIHLIYFASLIESYRTGDLGQVYPIARGSAPLMTAA
                     ATAIFIGEQLSPAGWSGILALVAGVFLLSARGGRELTQIDPRAIGFAFFTALTICAYS
                     VVDGIGARLSANPNAYSLWLFVGIAAVMVPYALYRDGRKVLPAMHRHWQRGFAGGALQ
                     LLSYGIAIWAMTAAPIAIVAALRETSVLFGAAIAVVVLKEPLRAVRVVAACLILLGLV
                     LIRVQ"
     gene            complement(2446..>2649)
                     /locus_tag="VIY07_14690"
     CDS             complement(2446..>2649)
                     /locus_tag="VIY07_14690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2064 domain-containing protein"
                     /protein_id="HEY6383038.1"
                     /translation="GYVLIGTRSTQPALFADMRWGTETVVAETRARVIAHRLALAERP
                     PLWDVDTEIDLVRLEREYPDLRL"
BASE COUNT          465 a          782 c          773 g          629 t
ORIGIN      
        1 aaaacggccg gcatacgcgt tgatgacaaa gccagatcac gcgcgcagcg cgccttcgag
       61 ctccttctcc gcccacttga tgacgtcgtc gagcttctcg ttgccctgcg tgaatttgga
      121 caccatcacg gtgttgatgg cctgattgta catctgcgca ccgacttcgg agcgtgcagg
      181 cgcgccgaac atcgaggttt gctcgtcagc ccgaggtgga tagctgtaga cgacgccctt
      241 cggcggctcg accgtcttcc aggtctcgaa gtcgtacatg ctcttgaacg acggaaggtc
      301 gtacccgatc gaagcagcaa ccaattgggc catcgattcc ttttgcgaca tatgcagcag
      361 gagatctttg cccgccgact tgtttttcga gaaggtccat agtccgtaga actgcggaag
      421 ctgtccgaca aaacggccct tcggaccgct cggcatggcg tgatgccaga tgttttccgc
      481 gaccttgata ttgtcgcgct tggcgaccgc ccacgagctt ggcggattca tgatgccgga
      541 gcccttgccg gaaatgatcc accggttatt gccggcgtcg tcccacgcgt agacttcggg
      601 cggattaacc gccatcagct tcttcagata ttccaaagcc gcacgagttt cattcgagtt
      661 gactttgatg ttgtccttct cgtcgatcat cacgacgccg aaagatttaa acagcgcgcc
      721 gacccaatcg actgcgtcgc tggtctgacc catcggcaga ccgaccggat aaccggcctt
      781 gtgcagcttc tgcgcgcact cgagatagag atcccacgtc catttatcgg tcttggcctt
      841 gtcgtatttg gattcgtccg cggggaacat gtcgacgaga tccacaccgc agtgttcctt
      901 gtagagatcg aggcgcgatt gacacggctt gacctgactg ccgaccgccg tcggcacgcc
      961 gcgccatgtt cctttgatct tggcgagata ttcggcgacc gggctgatcg ggccgtactg
     1021 cttaatgagc tgaccgacga catcgtcgag cggttccagc aggcgttgat ggatctgaat
     1081 attccaatcg cgatgggaca ttatatcgtg accggtgccg gcttgagctt cggcggcggc
     1141 cgtcagcttg tctttctcgc cttgggacgt gatgtagtcg atgtggacat cgaccttgtt
     1201 cttttcgccc cattccttgc agattttatc gagtgtcttg ttagcgcccg gcacccagtg
     1261 atcccagcac cccaaggtca aggagcccgc ggcatggacg ccgcttacat aaggtgcggt
     1321 aatgaccgcc gcggagccga gggcggcagt cttgagaatg gcacgacgcg atagacgtga
     1381 ttgtcccata gtttcctctc ccaggtggca ccgaattttt tttgcatttg tgaaacgata
     1441 ctctggccca gcgcggacgg ctagtcacta agcgaatggt cggtataaaa ttgctgttcc
     1501 cttcgcgtcg caacaggtcg agcggcgcat cgaactgcct atcggactaa ccccctcctt
     1561 tcgtcgaatg gtccgtttcg agcgctgatg gaaaatgccg ttttcctcgc cgttttgttt
     1621 gccgccgcct gccacgcagg ctggaacgcg ctgatcaagg ttggcctcga tccgctgtcc
     1681 accacgacat tgatttcggt cggggccggt ctggtggcat tcttgttcct gccattcgtg
     1741 ggcatgccgg cgtgggccgc gtggccctgg ctgattgctt cgatcgcgat ccacctcatc
     1801 tacttcgcgt cattgatcga gagctaccgc accggcgatc ttggtcaggt ttatccaatc
     1861 gcacgtggct cggcgccgtt gatgacggcg gctgccacgg caatttttat cggcgagcaa
     1921 ttgagtcccg ctgggtggag tggaatcctg gcgctggtgg cgggagtgtt tctgctgtcg
     1981 gcccgcggtg gccgcgagct cacgcaaatc gatccgcgcg ccatcgggtt tgcgtttttc
     2041 accgccctga caatttgcgc gtactccgtt gtggatggca tcggtgcccg gctttccgcc
     2101 aatcccaacg cctattcgct ctggttgttt gtcggtatcg cggcagtgat ggtgccttac
     2161 gcactctacc gcgacggccg caaggtgctc cccgcaatgc atcgccactg gcagcgcggt
     2221 tttgccggcg gcgcgttgca gctcctttcc tatggaattg caatctgggc tatgacggcc
     2281 gcacccatcg ccatcgttgc ggcgctacgt gagacgagcg tcttgtttgg cgcggccatt
     2341 gcggtggtgg tgctcaagga accattgcga gccgtgcgcg tggttgctgc ctgcttgatt
     2401 ctcttgggcc tggtcctgat acgcgtgcaa tagtcgcaag caaaattaca gtcgcaagtc
     2461 gggatattcg cgctcaaggc gtaccaaatc gatttcagtg tcgacatccc atagaggagg
     2521 gcgctcggcc agtgcgagcc gatgcgctat cacgcgcgcg cgggtttcgg cgacaacagt
     2581 ttccgtcccc catctcatat cggcgaacag cgcgggttgc gtggaacgcg tgccgatcag
     2641 gacatagcc
//
LOCUS       DATDHO010000760         2553 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_234663, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000760 DATDHO010000000
VERSION     DATDHO010000760.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2553
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234663"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2090)
                     /locus_tag="VIY07_14695"
     CDS             complement(<1..2090)
                     /locus_tag="VIY07_14695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015600030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY6383039.1"
                     /translation="MDLNRLTEKSQEALRRAQALATRRNHQAVDVEHLLAALLEESEG
                     LAAALLAACNIAPSAAREQIEKELNRVPQVSGPGTDAQQVYMTQRLSRVLTQAEDEAK
                     SLNDEYVSIEHLLLAILAEKAGAAGRALQSLGLTRAKLMDALKKVRGHQRVTSPTPEA
                     TYQALERYGRDLTALADQGKLDPVIGRDEEIRRVIQVLSRRTKNNPVLIGDPGVGKTA
                     IVEGLAQRIVRGDVPESLKNKRLVVLDMGALIAGAKFRGEFEERLKAVLKEVQESQGE
                     IILFIDELHTVVGAGAAEGAMDASNLLKPLLARGELHCIGATTLDEYRKYVEKDRALE
                     RRFQPVYVDQPSVEDTISILRGLKERYEVHHGVRIKDSALVTAAVLSDRYISDRFLPD
                     KAIDLVDEAAAKLRTEIDSLPTELDEVSRRVMQLEIEREALRKESDSASRDRLAKLEK
                     ELADLKSEQERLRANWEVEKQAVGRVRGLKEEIEKTKLAIDQAQREYDLNRVAELKYG
                     KLAQLERDLTNEEKRAHEQGSSQMIKEEVDEDDIAAIVARWTGIPVTKLLEGEKDKLL
                     RLAEHLHKRVVGQDEAVDAVADAVIRARSGLKDPNRPIGSFIFLGPTGVGKTELARAL
                     AEFLFDNENNMVRLDMSEYQERHTVARLIGAPPGYVGYEEGGQLTEAVRRKPYSVILF
                     DEIEKAHVDVFNVLL"
     gene            complement(2107..>2553)
                     /locus_tag="VIY07_14700"
     CDS             complement(2107..>2553)
                     /locus_tag="VIY07_14700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383040.1"
                     /translation="GEQRNLPLPRSILRVLTVKNAAFEAALARVSGRLTAAEVGSKEY
                     PDGLAAGVILSADEAARGGVIFLAVPSCSPCERCGGSGREELFPCEWCDGEGLLQEQE
                     IVRIHVPPGISDVTLLEVPLRGLGIHNFYLRLHIRVVSETARAGFQ"
BASE COUNT          474 a          823 c          690 g          566 t
ORIGIN      
        1 agcaagacat tgaacacatc gacatgggcc ttctcgatct catcaaataa aatcactgaa
       61 taaggcttgc gccttactgc ttccgtgagc tggccgcctt cttcgtaccc cacgtagccc
      121 ggcggagcgc cgatcaaccg ggcgacggta tgtctttcct ggtattcgga catgtcgaga
      181 cgcaccatgt tgttctcgtt gtcgaacaag aactcggcta gggcgcgagc caactctgtc
      241 ttgccaaccc ctgtcggccc taaaaaaata aatgagccga tgggacggtt gggatcttta
      301 agtcccgagc gggcgcggat gaccgcatcg gcaaccgcat ccaccgcttc gtcctggccg
      361 accacgcgct tgtggagatg ctctgccagc cgcagaagct tgtccttctc gccttcaagc
      421 agttttgtga ccgggatacc ggtccaacgc gccacgatcg ccgcgatgtc gtcctcatcc
      481 acttcttcct tgatcatctg cgagctgcct tgctcgtggg cccgcttctc ctcattggtc
      541 aggtcgcgtt cgagctgcgc cagtttgcca tacttgagct cagcgacccg gtttagatca
      601 tactcccgct gcgcctgatc gatggccaac ttggttttct cgatctcctc cttgaggccg
      661 cgcacacgac cgacggcctg tttttccacc tcccaattgg ctcgcagtcg ctcttgctcc
      721 gatttcaggt ccgccagctc tttttccaat ttggccaggc ggtcgcgcga agccgaatcg
      781 ctctctttgc gcaatgcttc gcgctctatt tccagttgca tgacgcggcg cgagacctca
      841 tcgagctccg tcggcagcga gtcaatctcc gtgcgcagct tggccgccgc ctcatcgacc
      901 aggtcaatcg ccttgtccgg caagaaccgg tcgctgatgt agcgatcgga gagaacggcg
      961 gcggtgacta gggcagagtc tttgatgcgc acgccatggt gaacttcgta gcgttccttg
     1021 aggccccgta ggatcgaaat cgtatcttca acacttggct gatcgacgta gaccggctgg
     1081 aagcgccgct ccaacgcccg atccttctcg acatatttgc ggtattcatc caacgtcgta
     1141 gcgccaatgc agtgcagttc gccgcgtgcc agcaagggtt taagcaggtt ggaggcatcc
     1201 atggcgccct cggcggctcc cgctcccacc accgtgtgca attcgtcgat aaaaagaatg
     1261 atttcgccct gcgattcctg cacctcttta agcacggctt tgagtcgctc ctcaaactcc
     1321 ccgcgaaact tcgccccggc gatcagcgct cccatgtcca aaaccaccaa ccgcttgttc
     1381 ttgaggctct cgggcacatc accgcgcacg atgcgttgtg ccagcccttc aacaatcgcg
     1441 gttttgccca cgccgggatc gccgatgagc acgggattat ttttcgtccg cctggagagc
     1501 acctggatta cgcgccggat ctcctcgtcg cggccaatca ccgggtcgag ttttccctgg
     1561 tcggcaagcg cggtgaggtc tctgccgtag cgctccagtg cctgataggt cgcttccggc
     1621 gttgggctcg tgacccgttg atggccgcgc accttcttca aggcgtccat gagctttgcg
     1681 cgggtcaaac ccagggactg aagcgcccgt ccggcggcgc cggccttttc tgccaatatc
     1741 gccaacagta agtgctcgat gctgacatat tcatcattca ggcttttggc ctcgtcttcg
     1801 gcctgggtta acacccgcga caaccgctgc gtcatataga cctgttgggc gtcggttcct
     1861 ggcccggaga cctgcggaac gcgattcagc tccttctcga tttgctcacg cgcggcgctg
     1921 ggcgcaatgt tgcaagcggc caagagcgct gccgccaatc cttcggactc ttctaaaagc
     1981 gccgcgagca gatgttcgac atcgaccgct tggtgattgc ggcgcgtggc gagcgcctgc
     2041 gcacgtcgca gggcctcctg cgatttttcg gtcagacgat tgagatccat aagagttttt
     2101 cctttctcat tgaaatccgg cgcgggccgt ttcggaaacc acccgaatat gcaggcgaag
     2161 ataaaaattg tggatgccta gtccgcgcaa aggcacctcc agcagcgtaa catcactgat
     2221 gccgggcgga acgtgaatac gcacgatttc ctgctcttgg agcaggcctt ccccgtcaca
     2281 ccattcgcac gggaagagtt cttctcgccc cgagccgccg cacctctcgc acggagaaca
     2341 gctcggaacg gcaagaaaga taaccccgcc tcgggcggcc tcatccgcag acaggatcac
     2401 gccggcagca agcccatcgg gatattcttt cgagccgact tcggccgcgg tcaggcgccc
     2461 gctcacccgg gccaacgccg cctcgaaagc tgcgttcttt acggtaagaa cgcgcaagat
     2521 agaccttggc agaggcaaat ttcgttgctc tcc
//
LOCUS       DATDHO010000761         1863 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_234752, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000761 DATDHO010000000
VERSION     DATDHO010000761.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1863)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1863)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1863
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_234752"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(88..>1863)
                     /gene="sdhA"
                     /locus_tag="VIY07_14705"
     CDS             complement(88..>1863)
                     /gene="sdhA"
                     /locus_tag="VIY07_14705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEY6383041.1"
                     /translation="IEDHSHDVVVVGAGGSGLRAVVGCSEAGLRTACITKVFPTRSHT
                     VAAQGGIAAALGNMGEDDWRWHMYDTVKGADWLGDQDAIEYLCRNAPAAVYELEHWGL
                     PFSRREEDGKIYQRPFGGMTTHYGKGTAQRTCAAADRTGHAMLHTMYGQSLRYAAEFY
                     IEYFAIDLIMDDEGRCRGVIALNMDDGSIHRFSANMTILATGGYGRAYFSCTSAHICT
                     GDGNAMVLRAGLPLQDMEFVQFHPTGIYPAGCLITEGSRGEGGYLVNSEGERFMERYA
                     PSAKDLASRDVVSRAMTVEIRQGRGVGKENDHLFLHLDHLDPEVLQERLPGISETARI
                     FANVDVTREPIPVLPTVHYNMGGIATNYHGEALTKKNGNDDTVIPGLMALGEAACVSV
                     HGANRLGSNSLIDLVVFGRAAAQRCAELLTPGDTQPELPKNSADMSLSRLDKFRHASG
                     GTSTAKLRLNMQRVMQEDCAVFRNGEVLDQGHKRIIEVFQGMTDVHVTDRSLIWNSDL
                     IETLELDNLIAQAVVTMDSARNRTESRGAHAREDYPERDDKNWMKHTLAWIGDRGNTT
                     IDYRPVHDYTMTNDVQYIPPKARVY"
BASE COUNT          345 a          576 c          551 g          391 t
ORIGIN      
        1 cggcttcggc caggccttgc cgcctgatat cttcgagttc ttgggaagtg tgaattcagc
       61 catacttgca agccttcgct gtcgttctca atacacgcgc gccttcggcg ggatgtactg
      121 aacgtcgttc gtcatcgtgt agtcgtgcac cgggcggtaa tcgatcgtgg tgttgccgcg
      181 atcgccgatc cacgccagcg tgtgcttcat ccagtttttg tcgtcccgct cgggataatc
      241 ctcgcgcgca tgtgcaccgc gactctcggt gcggttcctc gcagaatcca tcgtgacgac
      301 ggcctgagcg atgaggttgt caagttcgag cgtttcgatc agatcggaat tccagatcag
      361 cgaacggtca gtgacatgaa cgtcggtcat gccttggaac acctcaataa tccgcttgtg
      421 cccttgatcc agcacttcac cgttgcggaa gacagcgcaa tcttcctgca tcacccgctg
      481 catgttcaga cgcaacttgg cggtggaggt cccaccggat gcatggcgga atttgtccag
      541 ccgcgacagc gacatgtcgg ccgaattctt cggcagctcg ggttgcgtgt cccccggcgt
      601 cagcaactcc gcgcaacgtt gggccgcggc acggccaaaa acaaccagat cgatcagcga
      661 gttcgaacca agacggttgg cgccgtggac tgaaacgcaa gcggcctcgc cgagcgccat
      721 caggccggga atgacagtgt catcattgcc gtttttcttg gtcagcgcct cgccatgata
      781 gttcgtggcg atgccgccca tgttgtaatg taccgtcggc agcaccggaa tcggctcacg
      841 cgtcacatcg acattggcaa aaatgcgcgc tgtctcgctg atgccgggca acctctcctg
      901 caggacttcc gggtcgagat gatccagatg caggaacaag tgatcgtttt ccttgccgac
      961 gcctcggccc tggcggattt cgaccgtcat tgcgcgcgag acgacgtcgc gcgaggcaag
     1021 gtccttggcc gacggcgcgt atcgctccat gaaccgctcg ccttccgagt tgacgagata
     1081 gccgccttcg ccgcgcgatc cttctgtgat gagacagcct gcggggtaaa tgccggttgg
     1141 atggaattgc acgaactcca tgtcctgcag cggcagcccc gcacgaagca ccatggcgtt
     1201 gccgtcgccg gtgcagatat gtgccgacgt acaggagaaa tatgcacgtc cataaccgcc
     1261 cgtggcgagg atggtcatgt tcgctgaaaa gcgatggatc gagccgtcat ccatattgag
     1321 cgcgatcacg ccgcggcagc gtccctcatc gtccatgatc aggtcgatcg cgaaatactc
     1381 gatgtagaac tcggccgcat agcgcagcga ttgtccgtac attgtgtgca gcatggcatg
     1441 gccggtgcga tcggctgcag cgcaggtgcg ttgcgcggta cccttgccgt agtgcgtggt
     1501 catgccgccg aacggacgct gatagatttt accgtcctct tcgcggcgcg agaacggcaa
     1561 tccccaatgc tccagttcgt agacggctgc cggcgcgttg cggcagagat actcgatcgc
     1621 gtcctgatct ccgagccagt cggcgccttt gaccgtgtcg tacatgtgcc agcgccagtc
     1681 atcctcgccc atgttgccga gcgcggccgc aattccgcct tgcgccgcaa ccgtgtgcga
     1741 acgggtggga aataccttcg tgatgcatgc ggtgcgtagg cctgcctcgc tgcatcccac
     1801 caccgcgcgc aggccggagc caccagcgcc gaccactaca acgtcatggc tgtgatcctc
     1861 gat
//
LOCUS       DATDHO010000762         9212 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_384477, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000762 DATDHO010000000
VERSION     DATDHO010000762.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 9212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9212
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_384477"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            100..1275
                     /locus_tag="VIY07_14710"
     CDS             100..1275
                     /locus_tag="VIY07_14710"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HEY6383042.1"
                     /translation="MKDDIVIVSAARTPVGAFNGAFANLPAHDLGKVAIKAAIERAGV
                     EGERVSEVILGQILTAGQGQNPARQASIAAAIPVETPAWGVNQLCGSGLRAVALGYQA
                     ILNGDSEIVVAGGQESMSMAPHCQHLRMGVKMGAFEMIDTMIKDGLWDAFNGYHMGTT
                     AENVAKQWQITRQQQDEFAVASQNKAEAAQKAGRFKDEIAPVTIKSRKGDVVVDADEY
                     PKPGVTMDSIAKLRPAFDKEGTVTAANASGINDGAAALVLMKASEAAKLGKTPLARIV
                     SWAQAGVDPAIMGTGPIPASRTALKKAGWKKEDLDLVEANEAFAAQACAVNKDLGWDT
                     AKVNVNGGAIAIGHPIGASGARVLVTLLYEMQKRNAKRGLATLCIGGGMGIAMCVER"
     gene            1368..2093
                     /locus_tag="VIY07_14715"
     CDS             1368..2093
                     /locus_tag="VIY07_14715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP reductase"
                     /protein_id="HEY6383043.1"
                     /translation="MARVALVTGGTRGIGAAISKALKAAGYKVAANYGGNDEAAQRFK
                     AETGIPVFKWDVSSYEACAEGIKKVEAELGPVEVLVNNAGITRDTMFHRMKPEQWTAV
                     INTNLGSLFNMCRPLIEGMRERKFGRIVNISSINGQKGQAGQTNYSAAKAGELGFTKA
                     LAQEGARSGITVNAICPGYINTEMVQAVPKDVLEKSILPQIPIGRLGEPEEIARCVVF
                     LASDGAGLITGATLSANGGQHFI"
     gene            2109..2444
                     /locus_tag="VIY07_14720"
     CDS             2109..2444
                     /locus_tag="VIY07_14720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383044.1"
                     /translation="MKAIGVGLAVAGLLVVSPIRPLSAQDIDARCKDVYDKVACGCAV
                     QNGGRVIPPSVGVKREGLKLRPREGSTQTLDGGQVAFPKYFRRDGFKVRKSHALEGYM
                     ACMRANGRK"
     gene            complement(2587..3012)
                     /locus_tag="VIY07_14725"
     CDS             complement(2587..3012)
                     /locus_tag="VIY07_14725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6383045.1"
                     /translation="MLTAAEMIQALDLKPHPEGGHYRETFRDSRLVEGRPASTAILFL
                     LAEGERSHWHRIDAVEIWHYYAGAALRLSLVDGSKEEIFRLGGDVRAGEVPQVTVPAR
                     AWQAAESLGEWTLVGCTVAPGFSFDGFELAPAGWSPQRK"
     gene            complement(3025..3792)
                     /gene="gloB"
                     /locus_tag="VIY07_14730"
     CDS             complement(3025..3792)
                     /gene="gloB"
                     /locus_tag="VIY07_14730"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEY6383046.1"
                     /translation="MPSETRVFLCRSDNYGVLVHDTGSGATAAIDAPDTGPIERALRE
                     TGWKLTDILVTHHHADHTDGIVALKEKYKCRVVAPAAEAKKIPAVDETVREGDKARVG
                     SLSADVIETPGHTLGHIAYWFHADKLAFVGDTLFSIGCGRVIEGTPEQMWRSLVKLRD
                     LPDDTEIYCGHEYTLANIKFARTIEPGNKALAAREAEATHQVAQSEPTIPVTIGEEKL
                     ANPFLRADRAEIAAGIGMAGKPAAEVFAEIRARKNRF"
     gene            3902..4633
                     /locus_tag="VIY07_14735"
     CDS             3902..4633
                     /locus_tag="VIY07_14735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY6383047.1"
                     /translation="MSIDVVDLRNFYGQRLGVVARRFIARGIRSLWDDTTGQRVLGIG
                     YATPYLGLFREEAERCLAFMPAGQGVVKWPTMRPALSALVDEDELPLPDSAADRVILV
                     HALEMTNDPGALLREVWRVLASGGRLLAVVPNRRGLWARMDTTPFGHGRPYSRSQINQ
                     LLRETWFTPTGWSEALYVPPIARGLFLRSAVAWERTGATLSAPFAGVHLVEATKQVYR
                     AIPARRERRRLVPALEPALAPSPGG"
     gene            complement(4727..5494)
                     /locus_tag="VIY07_14740"
     CDS             complement(4727..5494)
                     /locus_tag="VIY07_14740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HEY6383048.1"
                     /translation="MRNGQKRMRGRGNHRKSQNPLTRVYESNGPDVKIRGTASHIAEK
                     YIQLARDAQGSGDPVAAENYYQHAEHYFRLIAAAQEQFRQQNPYYNQQPQQGAPGGQQ
                     QSNEESFDEGDDDAQPFMGQNEPSYAPREPQQQPYLPRDAQPFPPRDQQVHNRPPQHQ
                     GQPYQQSGHGGQEGGQEVGGLPAFITGGGQPQQNSGNGYDQGDRGQERFGHRRRRRHR
                     GGFRHDRPDYGGGHQLQQGSAPQPSQDDGGDEPRKPD"
     gene            complement(5993..6871)
                     /gene="prmC"
                     /locus_tag="VIY07_14745"
     CDS             complement(5993..6871)
                     /gene="prmC"
                     /locus_tag="VIY07_14745"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEY6383049.1"
                     /translation="MRVIPGLKAGASVSEVLHFVAQAFRPAGIEEAETDARVLVGYAL
                     RLDRSKLIAQSDRLLEAREIDAISALAARRLKHEPVSRILGKKEFWSLGLTVTPDVLV
                     PRPETETIVEVALDFVVRGGLRMEKLRILDIGTGSGALLLALLHELPNATGTGTDTSK
                     AATQVARDNAASLGFGPRCRFTVCDIASDVRGEFDLIVSNPPYIARADIASLQPEVRD
                     YDPIFALDGGEDGLTAYRAIAADAKRLLAAGGRLYVELGKGQEAAVRGLFAQAGLTVG
                     PARKDLAGIPRVLGAS"
     gene            complement(6868..7950)
                     /gene="prfA"
                     /locus_tag="VIY07_14750"
     CDS             complement(6868..7950)
                     /gene="prfA"
                     /locus_tag="VIY07_14750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEY6383050.1"
                     /translation="MIVLPQQKMDALLARHAMVESELATGLAPDAYVRLSREFAELSP
                     VVEAIRAYRSTDKEIAELAALIDDSGTDSEVRKLADVERHELLQRKEALTQQIRLALL
                     PKDAMDDHNAILEIRAGTGGDEASLFAGDLFRMYERYAAKQGWKTEILSISEGTKGGF
                     KEIVAEVRGRGVFAKLKFESGVHRVQRVPDTEASGRIHTSAATVAVLPEVEDVDIHIN
                     EADLKIDTMRAGGAGGQHVNKTESAIRITHIPSGIVVAVQEERSQHKNRAKAMTMLRA
                     KLYDQERSKRDAERAAERRGQVGSGDRSERIRTYNFPQGRVTDHRINLTIYKLPQVME
                     GEALDDVIDALVTEHQAELLAAESTE"
     gene            complement(7947..>9212)
                     /gene="ptsP"
                     /locus_tag="VIY07_14755"
     CDS             complement(7947..>9212)
                     /gene="ptsP"
                     /locus_tag="VIY07_14755"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEY6383051.1"
                     /translation="IIVARTMGPAALLDYDRKRLRGLVLEEGGPTSHVSIVARALGIP
                     TVGEIENATGLVEPGDAIIVDGSTGHIHMRPPQDIQASYGERVKLRARRQAQYRALRD
                     RPCVTRDGQKMSLMINAGLTIDLPHIEDTGAAGIGLFRTELQFMVATTLPRTGEQLAL
                     YRAVLDAAGKKPVTFRTLDIGGDKVLPYMRNIEEENPALGWRAIRLGLDRPGLLRSQV
                     RALLRAASGRGLKLMFPMIAVVEEFDKAKSLVEVELTHLRRHGHELPERVEIGTMLEV
                     PSLLFQLDELLERVDFLSVGSNDLMQFLYAADRGNPRVSERFDPLSAPVLRALKDIAD
                     KAKKHGKPVTLCGELASQPLGALALAILGYRTLSLTPSAVGPVKALLLDLDCRKGEAT
                     LLPCLEKPVGSVSIRQKLEGFAAAEGLQL"
BASE COUNT         1748 a         2754 c         2823 g         1887 t
ORIGIN      
        1 aaggcaggtt gggttgacag accgacaggc ccttccaagg atgcggcagt gccaaaaaac
       61 cgctccttgc cccagaactc gacgtaacag gagtttcaga tgaaagacga catcgtcatc
      121 gtgagtgccg cccgcacccc agtcggcgct ttcaacgggg cattcgcgaa cctgccggcc
      181 cacgaccttg gaaaggtcgc gatcaaggcc gctatcgaac gcgcaggggt tgaaggggag
      241 cgcgtcagcg aagtgatcct tggacagatc ctcaccgccg gtcagggcca gaatccggcg
      301 cggcaagcat caatcgcagc cgcgattccg gtggaaacgc ccgcgtgggg tgtaaaccag
      361 ctatgcggtt ccggcctgcg ggcggtcgcg ctcggctacc aggcaatcct gaacggcgat
      421 agcgagattg ttgttgccgg cgggcaggag tcgatgagca tggcgccaca ctgccagcat
      481 ttgcgcatgg gcgtgaagat gggcgcgttc gaaatgatcg acaccatgat caaggacggc
      541 ttgtgggatg ctttcaacgg ctaccacatg ggaactacgg cggaaaacgt cgcgaaacaa
      601 tggcagatca cgcgccagca gcaggatgaa ttcgccgtcg cctcgcagaa caaggcagaa
      661 gcggctcaga aagccggcag gttcaaggat gagattgcgc cggtcaccat aaaatcgcgc
      721 aaaggcgatg tggtggtgga cgccgacgaa tatccgaagc cgggcgtaac gatggactcg
      781 atcgcgaagc tgcgccccgc gttcgacaag gaaggaaccg tgacggcggc caacgcatcc
      841 ggaatcaacg acggtgccgc cgcattggtg ctgatgaaag cgagcgaggc ggcaaagctg
      901 ggcaagaccc cgcttgctcg catcgtgtcg tgggcgcagg ccggcgtcga ccccgccatc
      961 atgggaacag gaccgattcc ggcgtcccgc accgcgctca agaaagccgg ctggaagaaa
     1021 gaagacctcg acctggtgga agccaacgaa gcttttgctg cgcaagcctg tgcggtgaac
     1081 aaggaccttg gttgggatac cgcaaaggtc aatgtcaatg gtggtgcgat cgccattggc
     1141 cacccgatcg gcgcgtcggg agcgcgggtg ctggtcacgc tgctttacga gatgcagaaa
     1201 cggaatgcga agagaggcct tgcaacgctc tgcatcggtg gcgggatggg catcgcgatg
     1261 tgcgtcgagc ggtagtccat tctgccgttt gcagccttga tttaaatcat ggccgggctt
     1321 gtcccggcca tgatgtttta agaagatagt ccagaggtga aacagccatg gcgcgcgttg
     1381 cattggtcac tggtggaacc cgtgggatcg gggcggcaat ctcgaaagca ctgaaagcgg
     1441 ccggctacaa ggttgcggcc aactatggcg gcaatgacga ggccgctcag aggttcaagg
     1501 ccgagaccgg catcccggta ttcaaatggg atgtgtcatc gtatgaggcc tgcgccgagg
     1561 gtatcaaaaa ggtcgaagct gagctcggtc cggtcgaggt gcttgttaac aatgccggca
     1621 tcacgcgcga cactatgttt caccgcatga agcccgagca atggacggcg gtgataaaca
     1681 caaatctcgg ttcgctgttc aacatgtgcc gcccgctcat cgagggcatg cgtgagcgca
     1741 agtttggccg catcgtcaac atctcctcca tcaatggcca gaaggggcag gcgggccaga
     1801 ccaattattc tgccgccaag gcaggcgagc ttggcttcac caaagcgctt gcgcaggaag
     1861 gggctcgctc cggcattacg gtgaacgcga tttgcccggg atacatcaac accgaaatgg
     1921 tgcaggccgt gccgaaagat gtgttggaga aatccatact gccgcaaatt ccaattggtc
     1981 gcttgggcga gccggaggaa atcgctcgtt gcgtcgtgtt ccttgcctcc gatggggccg
     2041 ggctgatcac cggcgcgaca ctttctgcga acggcggaca gcattttatc taggtgccga
     2101 caagtctcat gaaggcgatt ggggtcggac tggcagtcgc aggccttttg gttgtctcgc
     2161 ccatccgacc gttgtccgcg caggatatcg atgcgcggtg caaggatgtt tacgacaagg
     2221 tcgcgtgcgg atgcgcggtg caaaatggcg gacgcgtcat tcctccgtcg gtcggcgtga
     2281 agcgcgaagg tctgaagttg cgcccgcgtg aaggatcgac tcaaacgctc gatgggggcc
     2341 aggtcgcatt tccaaagtat ttcaggagag acgggttcaa ggtgcgcaag agccatgcgc
     2401 tcgagggcta catggcatgc atgcgcgcaa atggccgcaa gtaggccagt gagattgctg
     2461 ggataaacgc acttcctctc aaccgtcatg ccccgccttg tgctgggcat ccatgacttt
     2521 ctgacctcaa gtaaagttaa gacgtggatg gccgggacaa gcccggccat gacgaaggca
     2581 ttcgccctat ttgcgctgcg gcgaccagcc ggcaggcgcc agctcaaagc catcgaaaga
     2641 gaatccgggc gcgacggtgc agccgacaag cgtccattcg ccaaggcttt ccgctgcctg
     2701 ccaggcacgc gcggggactg ttacctgcgg cacttcacct gcacggacgt cgccgcccag
     2761 acgaaaaatc tcttccttgg agccgtctac taacgacagc ctgagcgcgg cgccggcgta
     2821 atagtgccag atctcgaccg catcgatgcg gtgccagtgg gaccgttcgc cttctgcaag
     2881 caggaacagg attgcggtgg aagcgggccg gccttccacc agtcgcgagt cacgaaaagt
     2941 ttcacgatag tgaccgccct ccgggtgcgg cttgaggtca agcgcctgga tcatctcggc
     3001 ggcggtcagc attcacatgc gccgctagaa tctgttcttg cgtgcccgaa tctcggcaaa
     3061 tacctcggcg gctggcttcc cagccatgcc gatgccggcg gcgatctccg cgcgatccgc
     3121 gcgcaagaac gggttggcca gcttctcctc gccgatggtg accgggattg tcggctcgct
     3181 ttgcgcgacc tgatgcgttg cctcagcctc gcgcgcggcc agcgctttgt tgccaggctc
     3241 tatggtgcgc gcaaacttga tgtttgcaag ggtgtattca tgtccgcaat agatctcggt
     3301 gtcgtcaggc aagtcgcgca gtttcacgag tgagcgccac atttgttcgg gcgtgccctc
     3361 gatcacgcgt ccgcaaccaa tcgaaaacag agtgtcgccg acgaacgcaa gcttgtcggc
     3421 gtgaaaccag taagcaatat ggccaagcgt gtgacccggc gtctcgatca cgtcggcaga
     3481 aagtgagcca actctagcct tgtcgccttc acgcaccgtc tcgtccacgg ccggaatttt
     3541 ctttgcctcg gcagccggcg ccaccacgcg gcatttgtat ttttccttca gggccacgat
     3601 cccgtccgtg tggtcggcat ggtgatgggt gaccagaatg tcggtcaatt tccagcccgt
     3661 ttcacgcagt gccctttcga tgggccctgt gtccggcgcg tcaattgcgg cggttgcccc
     3721 gctgccggtg tcatgcacca gcactccata gttgtccgat cggcagagaa aaacacgggt
     3781 ttctgagggc attggcttta tccctgtcag tgttctggaa agaattaacc gtatcacggc
     3841 gggcgtcgac cgtgcacgtc cgttagcctt tgctgcagcg tttcatgata gttttgccgc
     3901 catgtcgatt gatgtcgtcg acctgcgcaa tttctatggc cagcggcttg gcgtcgtggc
     3961 ccgccgtttc atcgcccgtg gtattcgctc gttgtgggac gataccaccg gtcagcgcgt
     4021 cctcggcatc ggttatgcca cgccctacct cggcttgttt cgcgaggaag cggagcggtg
     4081 tctggcattc atgccggccg ggcagggcgt cgtgaaatgg ccaaccatgc gtccggcgtt
     4141 gtccgccctg gtggacgaag acgaattgcc gctccctgat tccgcagccg accgggtcat
     4201 actcgtgcac gcgctggaaa tgacaaacga tccaggtgcg cttttgcgcg aggtctggcg
     4261 ggtgcttgcg tccggcggcc ggttgctggc ggtcgtcccg aatcggcggg gcctgtgggc
     4321 gcgcatggac accacgccat tcggacacgg tcgtccttac tcgcgcagcc agatcaatca
     4381 gctcttgcgc gaaacgtggt tcacgccaac cggctggagc gaggcgctgt acgtgccgcc
     4441 gatcgcgcgc ggcttgtttc tgcgctcagc ggtggcgtgg gagcgcactg gagcgacatt
     4501 gtcggcgcca ttcgccggag tgcatctggt tgaagcgacc aagcaggtct accgcgcaat
     4561 cccggcacgc cgcgagaggc ggcgcctggt gccggctctc gagcccgcgc tcgcgccatc
     4621 accgggcggc tgagcagtag tcttctcaaa agcgaacgat caatgcgcga cgcagtgact
     4681 gctgcgaagc tacattcgct gtaacgcaat caatgcggct ggccgatcag tcgggcttgc
     4741 gaggttcgtc gccgccgtcg tcttgcgacg gctgcggggc cgagccctgc tgtagttgat
     4801 gtccgccacc gtaatcggga cggtcgtggc gaaagccgcc gcgatgtcgt cggcgcctcc
     4861 gatgtccgaa gcgctcctga ccgcgatcgc cctgatcgta gccgttaccg gaattttgct
     4921 gcggttgtcc gccgccggta atgaatgcgg gaaggccacc gacttcttgt ccgccttcct
     4981 gtccgccgtg gcccgactgc tggtatggct gcccctgatg ctgcggagga cggttgtgca
     5041 cctgctggtc acgcggcgga aatggctgtg cgtcgcgagg cagatagggc tgctgttgag
     5101 gttcgcgcgg cgcgtagctg ggttcatttt gacccatgaa aggctgcgca tcgtcgtcgc
     5161 cttcgtcgaa actctcctcg ttgctctgct gctgtccgcc cggcgctccc tgctgcggct
     5221 gctggttgta gtaaggattc tgctgacgga actgctcctg cgccgcggcg ataagacgga
     5281 aataatgttc ggcatgctgg tagtaatttt ccgcggctac cgggtcgccg gatccctgcg
     5341 cgtcgcgcgc aagctggatg tatttttccg ctatatgcga agctgtgccg cggattttga
     5401 cgtccggccc gtttgattcg taaacgcgcg tcaacggatt ttggctcttg cggtggttgc
     5461 cgcgtccccg catgcgcttc tgaccgtttc tcatggtatc cctgttattg cctttcgctt
     5521 gttgcggcat tcgccgccga acgcctaacc aaaatgcaag tccatgcaac tcttattgcg
     5581 cggccggacc tgcattcgat atccgcgcca atgaccgaac cgttttgctc tttatcgcga
     5641 tagtcgcagc taccccttag ccgcggccct gccgcagcgt tgccaacctc tcgttacgcg
     5701 catcgtgcca ggtttcgaaa tatgatgcgc ccaaccggtg aagcatccag acccgtatct
     5761 ggcgatttcg tttgccgtct atccgaagcc ggctctgcgt catccgcctt gcgtcgcacc
     5821 tcacagagca gctgctccgg ggtcatggcg atgcaaccgt cacgggtcga ttccgtgatc
     5881 ggaagctagt cgtttccgga gcataatcca agcgattttt ttgcgaacaa atcagctctg
     5941 caattttcat cggggggggg aatgcgacat gctcatgact tgacctaacg acctaacttg
     6001 cgccgagcac gcggggaatt ccggccaggt ctttacgcgc ggggccgacc gttagccctg
     6061 cctgggcaaa caatccgcga acggccgctt cctggccttt gcccagttcc acgtacagtc
     6121 ttccgcctgc cgccagcagg cgctttgcgt ccgcggcaat ggcccggtat gcggtcaacc
     6181 cgtcctcgcc gccatcaagt gcaaagattg ggtcgtaatc ccgcacctcc ggctgaaggg
     6241 aggcgatgtc agcacgcgcg atataggggg gatttgagac aatcaggtcg aactcacccc
     6301 gaacatcaga agcgatatcg cagacggtga atctgcagcg cggtccgaaa cccagcgatg
     6361 cggcattgtc gcgcgcaacc tgcgtagccg ccttgctggt gtcggtacct gtcccggttg
     6421 catttggcaa ttcgtgcaac agcgccagca gcagcgcgcc tgaaccggtg ccgatgtcga
     6481 ggatgcgcaa tttttccatg cgcagcccgc cgcgcacgac gaaatcgagc gcgacttcaa
     6541 cgatggtttc cgtctccgga cgcggcacca gaacgtccgg agtaaccgta aggccgagac
     6601 tccagaattc cttttttccg agaatgcgcg ataccggctc gtgctttagt cgacgcgcgg
     6661 cgagcgctga tatcgcgtcg atctcgcgcg cttccaaaag acgatccgat tgcgcaatca
     6721 gtttgctgcg gtcgaggcgc aaggcatacc caaccagaac gcgagcgtcc gtttcagcct
     6781 cttcgattcc cgcgggacgg aatgcttgtg ccacgaagtg aagcacctca gagaccgacg
     6841 cacccgcctt gagtccggga attactctca ctctgtgctt tccgccgcca gcaattcggc
     6901 ttgatgctcg gtcaccagcg cgtcaatgac gtcgtcaagc gcctcgcctt ccatcacctg
     6961 cggcaatttg tagatcgtga ggttgatgcg atgatcggtg acgcgacctt gaggaaaatt
     7021 ataggttcga atccgctccg agcgatcgcc cgacccaacc tggccgcgcc gttccgcggc
     7081 ccgctcggcg tcgcgcttgc tgcgttcctg gtcgtagagc ttggcgcgga gcattgtcat
     7141 cgccttggcg cggttcttgt gttgcgatcg ttcttcctgc acggccacga cgatgccgct
     7201 tggaatatga gtgatgcgga tggcggattc ggttttgttg acgtgttggc cgccagctcc
     7261 gccagcgcgc atcgtatcga ttttgagatc ggcttcattg atgtggatgt cgacgtcctc
     7321 gacctcgggc aacaccgcaa cagtcgcggc cgaggtgtgg atgcgtcccg acgcttcggt
     7381 gtccggtacc cgttgcacgc gatgcacgcc ggattcgaat ttgagcttcg cgaatacgcc
     7441 gcgtccacgg acctccgcca cgatttcctt gaagccgccc ttggtacctt cgctgattga
     7501 aagaatttct gttttccagc cctgcttggc cgcatagcgc tcgtacatgc gaaaaagatc
     7561 gccggcgaac agagaagctt cgtcgccccc ggttccggca cggatttcga ggatggcatt
     7621 atggtcatcc atcgcgtcct tcggcaggag agccaggcga atttgctgtg tgagcgcttc
     7681 cttgcgttgc agaagttcgt gccgctccac gtcggcgagc ttgcggactt cggaatcggt
     7741 ccccgagtca tcgatcaatg ctgcaagctc ggcgatctcc ttgtcggtgc tgcgatatgc
     7801 ccttattgcc tcgacaaccg ggctgagttc ggcgaattcc cgtgacaacc tgacgtaggc
     7861 atcgggagcc aatccggtgg caagctcgct ttccaccatc gcgtggcggg cgagcagggc
     7921 atccattttt tgctgcggca ggactatcaa agctgcaatc cctcggccgc ggcgaagcct
     7981 tcaagtttct ggcggattga cacgcttccg accggctttt caaggcaagg caacagggtg
     8041 gcttcgccct tgcggcaatc aagatcgaga agcaatgcct tcaccggacc caccgcggaa
     8101 ggcgtcagcg aaagcgttcg ataaccgaga atcgccagtg ccaatgcgcc aagcggctgc
     8161 gatgcaagct cgccgcacaa tgtgaccggc tttccgtgct tttttgcctt atctgcgatg
     8221 tccttaaggg cgcgcaggac cggcgccgaa agcggatcga atcgctcgga cacgcgagga
     8281 ttgccccgat cggcggcgta aagaaattgc atcagatcgt tggaaccaac ggacagaaaa
     8341 tcgacacgtt ccagcagctc gtcaagctgg aacaggagag acggcacttc cagcatggtg
     8401 ccgatttcga cccgctcggg aagttcgtgc ccatgtcggc gcaagtgagt cagttcgact
     8461 tcgacaagtg actttgcctt atcgaattcc tcgacaaccg cgatcatcgg aaacatcagc
     8521 ttgagaccgc gcccgcttgc agcgcgcaac aacgcgcgta cctgacttcg gagcaagccg
     8581 ggcctgtcca ggccgagccg gatcgcccgc catcccagcg cggggttttc ttcctcgatg
     8641 ttgcgcatat acggcagcac cttgtcgccg ccgatgtcga gggtccggaa ggttaccggc
     8701 ttttttccgg ccgcatcgag gaccgcgcga taaagagcaa gctgctcgcc cgtgcgcggc
     8761 aaagtggtcg cgaccataaa ctgcagttcg gtacgaaaca ggccgatgcc ggctgctccg
     8821 gtatcctcga tgtgtggcag gtcgatcgtg agtccggcgt ttatcatcag cgacatcttt
     8881 tggccgtccc tggtgacaca aggccgatcg cgaagtgcgc gatactgcgc ctgccgccgc
     8941 gcacgaagct tcacgcgctc gccataagac gcctggatat cctgtggcgg ccgcatgtga
     9001 atgtggcctg tcgagccatc gacaataatg gcgtctccag gctcgaccag gccagttgca
     9061 ttttcgattt cgccgacggt cggaattccc agcgcccgag cgacaattga aacgtgcgat
     9121 gtcggtccgc cttcctcgag aaccagcccg cgtagtctct tgcggtcata gtcgagcaat
     9181 gccgctggac ccattgtgcg cgcgacgatg at
//
LOCUS       DATDHO010000763         8056 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_82663, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000763 DATDHO010000000
VERSION     DATDHO010000763.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8056
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_82663"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..539)
                     /locus_tag="VIY07_14760"
     CDS             complement(<1..539)
                     /locus_tag="VIY07_14760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEY6383052.1"
                     /translation="MQERSMLARYRMFAGYNAWCNERLFDASARVSDADYRANRGVFF
                     KSLHGTLNHLLVGDRIWMRRFTGEGEIPPSLDAILYDNFDRLRAARRNEDERIRRYIS
                     ALSEADLAKTIRYRTVVNPQDIEQPLAPALDHFFNHQTHHRGQAHALLSAISGNELTP
                     SFDLIIYQRQTGDGGLKIT"
     gene            680..1102
                     /gene="ndk"
                     /locus_tag="VIY07_14765"
     CDS             680..1102
                     /gene="ndk"
                     /locus_tag="VIY07_14765"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEY6383053.1"
                     /translation="MAIERTFSILKPDATERNLTGAINAVIEKAGLRIVAQKRMRISR
                     EQAEKFYSVHRERPFFRELVDFMISGPVVVQVLEGDNGIAKYRDVMGATDPVKAATGT
                     IRKLYARSIGENSVHGSDAPDTAVREIAQFFSENEIVG"
     gene            1225..1947
                     /locus_tag="VIY07_14770"
     CDS             1225..1947
                     /locus_tag="VIY07_14770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEY6383054.1"
                     /translation="MISAGWSDIGHTEFWIALAKIMWINILLSGDNAVVIAMACRGLP
                     YRQRVWGMILGAGVAVGLRVIFTAVVATLMTMPYLKIVGGLALFYIAAKLLVPDDPDE
                     SEAEAAEHLWRAVRIVAIADIIMSLDNVIAIAAAAGGNMALLVIGLAISIPLIIAGAA
                     LIMSLLDRFPILVWAGAALLGWIVGEVIATDPVVANWLKANYGAAVAHQVEIGSAIIG
                     AVLVLVVGGAWRRSKVQAESKA"
     gene            1973..4078
                     /locus_tag="VIY07_14775"
     CDS             1973..4078
                     /locus_tag="VIY07_14775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin oxidoreductase family protein"
                     /protein_id="HEY6383055.1"
                     /translation="MNQTVRLPKAKRLGYSACPHDCPSTCALEVELLDERTIGRVHGA
                     KDNDYTAGVICAKVARYAEREHHAQRLLHPLRRKGQKGSGQFEKISWDNALDLVAEKF
                     VQAEQRYGAESVWPYYYAGTMGLVMRDGINRLRHVKKYSGFHSTICVNPAYAGFAAGV
                     GRIAGVDPREMAKSDLVVIWGTNAVNTQVNVMTHAVRARKERGAKIAVVDIYMNGTMQ
                     QADLPVLVKPGTDGALACAVMHCLFRDGKADWQYLDKYTDAPRELEAHLRTRDPAWAS
                     AITGTPVATIEEFARLIGERKRVFFRLGYGFSRSRNGAANMHAASCIPAVTGAWQYEG
                     GGAFHISADIFQLDKTLIEGLDVRDSSVRMLDQSRIGGILTGEQETLQGGGSVQALII
                     QNTNPVSVAPDQNKVKEGFAREDLFVCVHEQFMTETAQMADVVLPATTFLEHDDIYRG
                     GGHQYLILGPKLVEPPGECRNNHEVICALAKRLGADHRGFEMSPRDLIDQMLRVSKRG
                     TFAELAANRWLDCQPPFRQSHYLDGFPWPDGRFRFKPDWPNVPFRSPCRSGPVDEMPP
                     LPDHWTSIEQSDMEHPFRLATSPARGFLNSTFNETPTSLEQERRPTVMVHPEDARMHG
                     IGEGDYVVLGNKRGEVRLHARLFAGVHRGVLIAESIWPNSAYADGCGINTLTGADPIA
                     PYGGAAFHDNRVWMRKARA"
     gene            complement(4115..4570)
                     /locus_tag="VIY07_14780"
     CDS             complement(4115..4570)
                     /locus_tag="VIY07_14780"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEY6383056.1"
                     /translation="MAGRSDARLLYPQLGSFYETWRDISFTLVRIVVGVIMVVHVWGK
                     FKVGAGAVATNAMTKYGLEPALGFAYAAMFLESVGGVCLIIGLFTRFFAAALAIEMLI
                     AMFAAHWSRGFLVSQGGYEFVLLLGVVCFAIAIRGGGPYSVDNAVGKEL"
     gene            complement(4683..5342)
                     /gene="purN"
                     /locus_tag="VIY07_14785"
     CDS             complement(4683..5342)
                     /gene="purN"
                     /locus_tag="VIY07_14785"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEY6383057.1"
                     /translation="MRRKRVAVLISGRGSNMAALIEAAKDKKYPAEIVLVISNRPGAG
                     GLLVAQAASIATVVVDHTQFGKNRTDFERAVQALLEKHRVDLICLAGFMRLFTPDFVS
                     KWHLRILNIHPALLPAFKGLDTHKRALQAHAKIHGATVHFVVPEMDSGPIIAQGAITV
                     RPIDSEGTLAMRVLEVEHRIYPLALRLVAEGRVTVENGRCLIDGIPVADGTDLVPDDV
                     T"
     gene            complement(5346..6416)
                     /gene="purM"
                     /locus_tag="VIY07_14790"
     CDS             complement(5346..6416)
                     /gene="purM"
                     /locus_tag="VIY07_14790"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEY6383058.1"
                     /translation="MAEKKRGLTYAQTGVDINAGNRMVELIKPLVRATARPGADAEIG
                     GFGGLFDLKRIGYRDPVLVAATDGVGTKLKVAIECRRHDTIGIDLVAMSVNDLVVQGA
                     EPLFFLDYYACGKLEPETGAAVVEGISRGCREAGCALIGGETAEMPGVYQGEDYDLAG
                     FAVGAVERDAVLPRGDIADGDVIIGLASSGLHSNGYSLVRKVVERTGLSWTAPAPFMP
                     EQSLGDAILTPTRIYVKACLATINESKAVKGLAHITGGGFPDNIPRVLPKGLGARIDL
                     ARVPVLPVFQWLAREGGIAENEMLRTFNCGIGMIVIVSPDHADAAARIFSRAGETTVR
                     LGSIIKRHDDDRVIYDGQLDLG"
     gene            complement(6604..6867)
                     /locus_tag="VIY07_14795"
     CDS             complement(6604..6867)
                     /locus_tag="VIY07_14795"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HEY6383059.1"
                     /translation="MTPRWPSDMTKAFTRKAKKLGFTKLRFHDLRGTHETLLLDNGVP
                     VHVVAARCGHDPAVLLRAYAKRTRKADTSAAAVIGSLSKIILR"
     gene            7269..7583
                     /locus_tag="VIY07_14800"
     CDS             7269..7583
                     /locus_tag="VIY07_14800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383060.1"
                     /translation="MSKAVTAGATALLGCILFATPFTLRLSPEGKVSLSMESASAVDA
                     GVNRRAHRRAYRRDYLSPSGYGYDAYCGWRNRCDYSAYERFSYRGFWGNYGFAYTPWW
                     AR"
BASE COUNT         1629 a         2336 c         2437 g         1654 t
ORIGIN      
        1 cttgttattt ttagcccgcc atctcctgtt tgcctctgat agatgatcag gtcgaagctg
       61 ggcgtcagct cgttgcctga aatggcgctc agaagtgcat gcgcctggcc gcgatggtgc
      121 gtttggtgat tgaaaaaatg atcaagcgcc ggagcaagcg gctgctcgat atcctgcgga
      181 ttgacaacgg tgcggtagcg gatcgtcttc gcgaggtcgg cctcgctcag ggcgctaata
      241 tatcgtcgaa tgcgttcatc ttcgttccgg cgggcggccc gcagccggtc gaaattgtca
      301 tagaggatcg cgtccaggct cggcgggatt tcaccctcgc cggtgaagcg ccgcatccag
      361 atacgatcgc cgacaagaag atgattgagg gtgccgtgca gcgacttgaa gaaaacacca
      421 cgattggcac ggtagtcggc atcgctgacc cgtgcgctcg cgtcaaatag ccgctcgttg
      481 caccaggcgt tgtagcccgc gaacattcga taacgggcga gcatgctgcg ctcctgcaat
      541 atagcgtcct ggatgggcat ccaaggcgat tcaatgcccg atcttgccgc ctgaagggag
      601 caccggtata agccgcgcgc cctgtcttct ccaatgaact ttcgtgaatc ttccattcct
      661 cccattgaag gaataactga tggcgatcga gcgtactttt tcgatcctca agccagacgc
      721 gaccgagcgc aatctgaccg gcgccatcaa tgccgtaatc gagaaggcgg gcctacggat
      781 cgttgcccag aagcgcatgc gaatttcccg cgagcaggcg gagaaatttt actcggtcca
      841 tcgcgagcgg cccttctttc gtgagttggt tgacttcatg atatcggggc ccgtcgttgt
      901 gcaggtgttg gagggagaca acgggatcgc gaaatatcgc gacgtcatgg gggcgaccga
      961 tccggtcaag gctgcaactg gaactattcg caagctttat gcgaggtcga tcggggaaaa
     1021 ttccgtgcac ggctcggatg cacccgatac tgcggtccgc gagattgcac agttcttttc
     1081 ggaaaacgag atcgtcggct aaggccctac aaagacgata aacagcccgc cgctggactg
     1141 caggcaggct gcaccaaacg caggggaagg aaaacgaaag tgggttcgat ggctcagttc
     1201 ctggatccaa tcggctggtg gtcgatgatc agcgccggct ggagcgacat aggccacact
     1261 gaattctgga ttgctctcgc caaaatcatg tggatcaaca ttctgttgtc cggcgacaac
     1321 gccgtggtca ttgcaatggc ctgccgcggc ttgccatacc ggcagcgcgt atggggcatg
     1381 attctggggg cgggcgttgc cgttgggctc cgcgtcatct ttaccgccgt cgtcgccaca
     1441 ttgatgacga tgccctatct gaagatcgtt ggcgggctgg cgctgtttta catcgcggct
     1501 aagctgctgg ttcccgatga tccggacgag agcgaggccg aagcagccga gcatctctgg
     1561 cgcgcggtgc ggatcgttgc catcgccgat atcatcatga gcctcgacaa tgtcatcgcg
     1621 attgccgccg ctgcgggcgg caacatggcg ctgctggtga tcggccttgc catcagcatt
     1681 ccgctgatca ttgcgggcgc ggccctgatc atgtcgttgc tggatcgctt cccgatcctg
     1741 gtgtgggctg gcgccgcgct gctgggctgg attgtcggcg aggttatcgc cacggatccg
     1801 gtagtcgcca actggctgaa ggccaactat ggcgctgccg tcgcgcacca ggtcgagatc
     1861 ggttccgcaa ttatcggcgc agtgctggtt cttgtggtcg gtggcgcctg gcggcgatcg
     1921 aaagtacagg cagaaagcaa agcctaggct gatccgctat aatgggagcg cgatgaatca
     1981 gaccgtccgt ctccccaagg caaagcggct tggctattcg gcctgtccgc acgattgtcc
     2041 atcgacctgc gcgctcgaag tcgaattgct cgacgagcgc acgatcgggc gcgtgcatgg
     2101 cgcgaaagac aacgactaca ccgcgggagt gatctgcgcg aaggtcgcgc gttacgccga
     2161 gcgcgagcat catgcgcagc ggctcctgca tcctttgcgg cgcaagggac aaaaagggtc
     2221 gggccagttc gaaaaaatct cctgggacaa cgcactcgat ctggtcgcgg aaaaattcgt
     2281 tcaggccgag caacgttacg gcgcggagag tgtctggccc tattattacg ccggcactat
     2341 gggcctggtg atgcgcgacg gcattaatcg cttgcgccat gtcaagaaat attccggctt
     2401 tcactcaacc atttgcgtca atccggccta tgccggattt gcggccggcg tcgggcgaat
     2461 agccggggtc gatccgcgcg aaatggccaa gtccgatctg gtcgtgatct ggggcaccaa
     2521 tgcggtcaat acccaggtca acgtcatgac gcatgcggtg cgcgcgcgca aagaacgcgg
     2581 cgcgaaaatc gccgttgtgg acatctacat gaacggcacc atgcaacagg cggacttgcc
     2641 ggtgctggtg aagccgggaa cggatggtgc gctggcgtgt gcagtcatgc actgcctgtt
     2701 ccgagatggg aaagctgatt ggcaatacct cgacaaatac acggacgcgc cacgcgaact
     2761 ggaagcacat cttcgcaccc gcgatcctgc gtgggcctcg gcaatcacag gtacgcctgt
     2821 cgcgacaatc gaggaattcg cgcggttgat cggcgagcgc aagcgcgtct ttttccgatt
     2881 aggctacggc ttctcgcgct cgcgcaacgg agcggcaaat atgcacgcgg caagttgcat
     2941 cccggccgtg acgggggcct ggcagtacga agggggcggc gcgtttcata tcagcgcaga
     3001 catttttcag ctcgacaaga ccttgatcga gggcctcgac gttcgtgaca gctctgtgcg
     3061 catgcttgat cagtcgcgca tcggcgggat cctgaccggc gagcaggaga cgctgcaagg
     3121 cggtggttcc gttcaggcgt tgatcatcca gaacaccaat ccggtctcgg ttgcgcccga
     3181 tcagaacaag gtgaaggagg gctttgctcg cgaggatctg ttcgtctgcg ttcatgagca
     3241 gttcatgacg gagaccgctc agatggcaga tgtggtgctc ccggcgacga ccttcctcga
     3301 gcacgacgat atttatcgcg gaggcggcca ccaatatctc attcttggac ccaaactggt
     3361 cgagccgccg ggcgagtgcc gcaacaatca tgaggtgatt tgcgcgctcg caaaacgtct
     3421 tggggccgac caccgtggat tcgagatgag cccgcgcgac ctgatcgacc agatgctgcg
     3481 ggtctccaag cgtggaacgt ttgccgagct cgctgccaat cgttggctcg attgccagcc
     3541 tcccttccgc cagtcacatt accttgacgg atttccttgg ccggacgggc gatttcgttt
     3601 caagcccgat tggccgaacg tgccgttccg tagcccttgc agaagcggtc cggtcgacga
     3661 gatgccaccg ctgccggatc actggacttc gatcgaacag tccgacatgg agcatccgtt
     3721 ccggcttgca acgtcgcctg cgcggggctt cttaaactcg acattcaacg agacgccgac
     3781 ctcgctcgag caagagcgga ggcccacggt gatggttcat cccgaggacg cccgcatgca
     3841 tggaatcggg gagggcgact acgtcgtgct cggcaataaa cgcggcgagg tccgtcttca
     3901 tgcgcggctt tttgcgggcg tgcaccgcgg ggtgttgatt gccgaatcga tctggccgaa
     3961 ttcggcctat gctgatggtt gcgggatcaa tacccttacc ggcgctgatc cgattgcgcc
     4021 gtatggcggc gcagcctttc acgacaacag ggtctggatg cgaaaagcgc gggcctgagg
     4081 cccgcgctcc gctttcgcca caagtcagac gcggctagag ttccttgccg accgcgttgt
     4141 cgaccgaata tggcccgcct ccgcggattg cgatcgcgaa acacaccacg ccgagcagca
     4201 agacgaactc gtagccgccc tggctaacca ggaagccgcg ggaccagtgc gctgcgaaca
     4261 ttgcgatcag catttcgatc gccagcgccg ccgcaaaaaa gcgtgtgaac aggccgatga
     4321 tcaggcaaac gccgccgacc gattcaagga acatcgctgc ataagcaaat cccagcgcag
     4381 gctcgagtcc gtatttcgtc atggcattag tcgcgaccgc gcctgcgcca actttgaact
     4441 ttccccatac gtgcacgacc atgatcacgc cgacgacaat gcgcacgagc gtgaacgaaa
     4501 tatcgcgcca tgtctcgtaa aacgatccca gttgcggata gagaagtctt gcgtcgcttc
     4561 tgccagccat ggtctccccc tggttgcttg tgccactcgc gtggcggccc tgtccgaacc
     4621 aagtctatat caccacgggt gggagtgaat tcattttgtg cgcttttgca gcgcgaaaaa
     4681 aatcaggtga cgtcgtctgg aacaaggtcc gtgccatctg caacggggat gccgtctatc
     4741 aggcagcggc cattttcgac ggtaacccgg ccttctgcta ccagcctcag ggctaatgga
     4801 tagatccgat gctcgacctc gagcacgcgc atggcgagcg tgccttcgct gtctattggc
     4861 cgcaccgtga tcgcgccttg cgcgatgatc ggtccggaat ccatttccgg cacaacaaaa
     4921 tgcacggtgg cgccatgaat tttggcatgc gcctgaagcg ctcgcttgtg cgtatcgagg
     4981 cccttgaagg cgggcagcag agccgggtgg atattcaaaa tgcgcaggtg ccatttgctc
     5041 acgaaatcgg gggtaaacag ccgcatgaag ccggcaaggc agatcagatc gacgcgatgc
     5101 ttttcaagca gcgcttgcac agcgcgctcg aagtcggtgc gattcttgcc gaattgggtg
     5161 tgatcgacga ccaccgtggc aatgctggcg gcctgtgcaa ccaaaaggcc gccggcgccc
     5221 gggcggttgg aaattaccag cacgatctcg gcggggtatt ttttatcttt ggcggcttca
     5281 atcaatgccg ccatgttcga tccgcggccg gaaatgagaa ccgctacgcg ctttcgacgc
     5341 atatctcacc cgagatcgag ttgtccgtcg taaatgacgc ggtcatcgtc gtgcctcttg
     5401 atgatgctgc cgagcctcac agtcgtttcg ccagcgcggg agaagatcct cgcagccgca
     5461 tcagcgtggt caggcgagac gatgacgatc attccaatcc cgcaattgaa ggttcgcagc
     5521 atttcatttt cggcgatccc tccttcacgc gccagccatt ggaatacggg cagcaccggc
     5581 acgcgcgcaa gatcaatgcg cgcgccgagc cctttgggca gaacgcgcgg aatgttgtcg
     5641 ggaaatccgc cgccggtgat atgcgccagg cctttcaccg ccttggattc gttgatcgtt
     5701 gcgagacacg ctttcacata aatacgcgtc ggggtgagaa ttgcatcgcc gaggctttgc
     5761 tcgggcatga acggcgcggg ggcggtccat gacagaccgg ttctttcgac gaccttgcgc
     5821 accaaggagt aaccattgga atgcagccct gaggacgcca gcccgatgat aacgtcaccg
     5881 tcagcaatgt cgccgcgcgg cagcactgcg tcgcgctcga cggcaccaac cgcgaagccg
     5941 gcgaggtcat agtcctcgcc ctgatagacg cccggcatct ccgccgtctc accgccgatc
     6001 agggcgcacc ccgcctcgcg gcagccacgg ctgatgcctt caaccaccgc cgctccggtt
     6061 tccggctcaa gtttcccgca ggcgtaataa tcaagaaaga agaggggctc ggcgccttgc
     6121 accaccaggt cattcacgct cattgcgacc aaatcaatgc cgatggtgtc gtggcggcgg
     6181 cattcgatcg cgaccttgag cttagtgccg acgccgtcgg ttgctgcgac cagcaccggg
     6241 tcgcggtagc caattcgctt gagatcgaac aatccaccaa atccgccgat ttcggcatct
     6301 gctcccggac gggcggtggc gcggaccagg ggcttgatca gctccaccat tcggttgccg
     6361 gcattgatgt caacaccggt ttgcgcgtaa gtgagaccgc gctttttctc tgccatgatg
     6421 gtcctctttc gcgccgcggt cgtacgttgg aatcgcaagt cgcgcaatgg ttcgagcgcc
     6481 gttatactct cacggtggca tcaatccacc cgacgctatt cccgctttgc aagatcaaac
     6541 acttagagca cgcgctacga gaacatttcg tgtcctggtc ccaatgttgg acccaacctt
     6601 aattcatcgc aggattatct ttgagaggct gccgataact gctgctgcgc tcgtatccgc
     6661 cttccgagtg cgcttggcat aggcccgaag cagcaccgcc ggatcgtgcc cgcaacgtgc
     6721 agcgacgacg tgcaccggca cgccgttgtc gagtagtagc gtctcatggg tcccgcgtaa
     6781 gtcatgaaat cgtaatttgg tgaaaccgag cttcttggcc ttgcgagtaa atgccttggt
     6841 catgtcgctc ggccaacgcg gggtcacgaa gtcggtgcca ggattgggga acaagaaact
     6901 gttgagggaa gttctcaatc accccgacac accattggat gtcaaaatcc aatgtgcggg
     6961 attagtgctg aagcaagaga cgccggcagt cgaacagcag caatacgtcg cgcacacgcc
     7021 accccaattg cctggggcag atcaacacga gcagctgagc tgatctgcga ccggactaca
     7081 gcaagcagcc ctccaggacg gatatttgtt gcagcaattc gcatgtctgc tttggaccaa
     7141 tagcggacgc ttttgcggtg gctattgggg gtaaagcgac ctcgtctctt gcaactcagt
     7201 cccgtcggtt cttgacgtgg gtcaatggaa gctccacgtg tggagtcatt attttgtagg
     7261 aggtcgcaat gtcgaaagcg gtaactgccg gagcaactgc gctcctcggc tgcattttgt
     7321 ttgcgactcc cttcacgctt cgcctttcgc ccgagggaaa ggtatcgctg tccatggaga
     7381 gtgcctcggc ggttgatgct ggtgtcaatc gcagagcaca tcggcgcgcc tatcggcgcg
     7441 actacttgtc cccttcgggt tacggctacg acgcatactg cggctggcga aatcgctgtg
     7501 actattcagc gtacgagcgg ttcagctacc gcggattctg ggggaactac ggattcgctt
     7561 acacgccgtg gtgggcacgc tgaaggggag gcgtaccagc attccggatc gttgacatgg
     7621 cgcgttctcc tgcgccccgt cgctccaata aaataaacgg ggctaccatc ggttatggct
     7681 gcgatggcag ccccgccaag atcccttctt gatcgtggag gatgaagagg gatcaagggg
     7741 aagggtagta ccgctcgatc aagcgcgacg gtaagacttt gcttcttgca caaattgtat
     7801 ccgcagttgc agaggcgcaa cggccctacg tcggcttctg aaacagctcc gtcctttatc
     7861 cggccctgtg gattaggcgc agcgcggttg ccgctgggtg gaagctgcgc cgacaggctg
     7921 tcagacttcg agaccggaga ggacatgaat gactgacgac gaggttggct tggaggccca
     7981 atggctcaag cgggagcttg agaaaactta tccaagggcg agggcactca tggacgaggt
     8041 tgacgccaac gattat
//
LOCUS       DATDHO010000764         1531 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_187230, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000764 DATDHO010000000
VERSION     DATDHO010000764.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_187230"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..217
                     /locus_tag="VIY07_14805"
     CDS             <1..217
                     /locus_tag="VIY07_14805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383061.1"
                     /translation="VDVKLGGQYDRFFWSAAVLNLFDKHYFDYAIASGGIAGGPFFPP
                     GLPPTIGLFSAFPLAGRTFLLQAGATF"
     gene            complement(239..1201)
                     /locus_tag="VIY07_14810"
     CDS             complement(239..1201)
                     /locus_tag="VIY07_14810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6383062.1"
                     /translation="MRPVSRRSFLTSSAFPAAAFAMPAQAKAPFAGTQGPGVYHLKLG
                     DFQLTALFDGVWYLPIDDKFVRNAGAAEVNQALAAAFLPPNVLPISFTALLVNTGSKL
                     VLIDTGTAGQVADTAGSMLENLRTAGIDPRAVDTILISHFHPDHIDGIKTKDGAKVFP
                     NAEILVPEPEWDFWMNDANMAPAEGAVKRYFLNAHRIFRDIASEVRRFKPGAEVAPGI
                     VSIPAFGHTPGHTAFAIHSGNQSMLSMSDTVRNPYLFARHPDWQPTFDMDGPQAVATR
                     RQMLDHVVADRMLVQAYHFPFPACGHMAKTATGYDLVPVEWQPL"
     gene            complement(1288..>1531)
                     /locus_tag="VIY07_14815"
     CDS             complement(1288..>1531)
                     /locus_tag="VIY07_14815"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6383063.1"
                     /translation="EAYAWWGIYAPAGTPKPVIERFGNEMAATLREERIAKQLVETQQ
                     VSLTLGGPEVQRAFLSNQMQTWGKVVKDNNIKADQN"
BASE COUNT          288 a          434 c          487 g          322 t
ORIGIN      
        1 agtcgacgtt aagctcggcg gccaatatga ccggttcttt tggtctgcag ccgtccttaa
       61 tctctttgac aaacattact tcgactatgc catcgccagc gggggaatcg ccggcgggcc
      121 attctttcct cctggcctgc cgccgacgat cggattgttc agcgcctttc cgttggccgg
      181 gaggaccttt ttgctgcaag cgggagcgac gttctagtcc aatggcggac agaacttttc
      241 acaggggttg ccactcgacc ggcacgaggt catagccggt cgcggtcttg gccatgtggc
      301 cgcacgcagg gaaggggaaa tggtacgctt gaaccagcat gcggtcggcg acgacgtgat
      361 cgagcatttg tcgtcgcgtc gcgacggcct gcggtccgtc catgtcgaaa gtcggctgcc
      421 aatcaggatg gcgggcaaag aggtagggat tgcgcaccgt gtcgctcatc gagagcatcg
      481 attggttgcc cgaatgaatg gcgaaagccg tatggcccgg cgtatgtcca aaggcgggga
      541 ttgaaacgat tcccggcgcc acttcggcgc ccggcttgaa ccgccgtact tccgatgcga
      601 tgtccctgaa aatgcggtgc gcgttgagga agtagcgttt cacggctcct tccgccggcg
      661 ccatgttcgc atcgttcatc cagaagtccc actccggctc aggcacaagg atctccgcgt
      721 tggggaagac ctttgcgcca tccttggtct tgatgccgtc aatatgatcg ggatgaaaat
      781 gcgaaatcaa aatcgtatcg actgcgcggg gatcgatacc ggccgtccta agattttcga
      841 gcatgctccc ggcggtgtcg gcgacttgac cggctgtccc ggtgtcgatg agcaccagct
      901 tcgaccctgt gtttaccaac aaggcggtga aagatatcgg caacacgttg ggcggcagga
      961 acgctgcggc gagggcctga ttgacctcgg cggcgccggc gttgcggaca aatttgtcgt
     1021 cgatcggaag gtaccagacg ccatcgaaca gtgcggtgag ttgaaaatcg cccaacttga
     1081 gatggtagac gcccggacct tgtgtgccgg cgaagggcgc cttggcttgg gccggcatag
     1141 caaatgcggc ggcgggaaag gcggatgaag tcaggaacga gcggcgggaa actgggcgca
     1201 tgatctcccg tctctcaggt gagcagggcg gattttcggc acgcgtctcg atcaggaaca
     1261 ccggatgcgg gcaattattc gttacgttca gttctggtcg gccttgatgt tattgtcctt
     1321 caccaccttg ccccaggtct gcatctggtt gctgagaaag gcccgctgaa cctcggggcc
     1381 gccgagggtc aacgagacct gctgggtttc gaccaactgc tttgcaatgc gctcctcgcg
     1441 caaggtcgcc gccatctcgt tcccgaagcg ctcgatgacc ggtttcggtg tgccggccgg
     1501 cgcgtagatg ccccaccagg cataggcctc g
//
LOCUS       DATDHO010000765         3007 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_36519, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000765 DATDHO010000000
VERSION     DATDHO010000765.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36519"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(246..509)
                     /locus_tag="VIY07_14820"
     CDS             complement(246..509)
                     /locus_tag="VIY07_14820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin"
                     /protein_id="HEY6383064.1"
                     /translation="MHRTLVVIAMALALAGCAGSARQDRVLGGALIGGGSGALIGGLA
                     GRTAGAAVAGGLIGAAAGAIIADATRPGWCYYWRKHRRYYVRC"
     gene            complement(1622..>3007)
                     /locus_tag="VIY07_14825"
     CDS             complement(1622..>3007)
                     /locus_tag="VIY07_14825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6383065.1"
                     /translation="ESLQQQTATADVLKVISSSPGELKPVFDAMLANATRICDASYGA
                     MWLQDGNEFRNAAFHGPLPSAYTDQWQSGMVFDPGSLNPMVRVSQTGKPLQIADMRED
                     RAYRDGHPLAVTGVEIAGIRTLVAVPMLKDNELAGVIAIYRKEVRPFTEKQIEVVQNF
                     AAQAVIAIENTRLLNELRQRTNDLTESLENLRATQDRLVQTQKLASLGQLTAGIAHEM
                     KNPLNFVNNFSTLTAELIDELQDTLKGLPFTDRARTQINELTHTLRDNLDKIVHHGKR
                     ADAIVKNMLLHSREASSEHRHVDINALVEESLNMAWHGARAEKQGFSIIIERSFDPAA
                     GEADVFPQEITRALLNLIANAFYAATKRKGEAGSDRYEPTLVASTRSLGDRVEISIRD
                     NGIGIPPNVKEKMFDPFFTTKPAGEGTGLGLSISHDIIVKQHAGSIEVDTRPGEFTEF
                     RIVLPRTAASL"
BASE COUNT          625 a          865 c          843 g          674 t
ORIGIN      
        1 cggatgatat taagcttcat gaacgccccc cgagcgagcc cggatgatac ggaaattacc
       61 ttgttgattt cgccccacgt ttgcggaact tgatcgtacc aagcccagcg ggtgatccga
      121 aaggggtagg cctcacgttg ggcaagagag cattgcggac gtatgcgaga tccgaacggc
      181 cgcagcaatt acgtgccggc ttggaaacga aacctacatc aatcagtact gcgagtattg
      241 gcggatcagc agcgcacgta atagcgtcga tgtttccgcc agtaatagca ccagccgggt
      301 cgcgtagcgt cggcaatgat cgcacccgct gcggcgccga tcagcccccc ggcaactgcg
      361 gcgccagccg tcctgccggc caggccaccg ataagcgcgc cgctgccacc gccgatcaat
      421 gcacccccga gaactcggtc ttgtcgggca ctccccgcac atccggccag cgccaaagcc
      481 atcgcaatca caaccagggt gcggtgcatc tggttctcct ctgcggaccg acattccctc
      541 cgggcgccag gcccatttcg gcgcgaccgg aattggcatc acagaaattg cctcacgcga
      601 gatcgggccc ggaggcagat gaataccgtt gctgcctagt tgcacacgaa ccctggtcgc
      661 cgtgacaatc tggtcacaag gtccaggcag cttgccacgt tctggagtga taggattttg
      721 gcgactggcc ggtgcgggtc cgccaccaat agaaaagccg accaccgcgg ccagaaatca
      781 agcgccgctt ttaactgaat tggacgacga cagtctcggc gtaggcgcac tgaacgcact
      841 cgaatgtgcg ctgatcctcg agcatccttt cggctggctc gatctgcgat agaaccatcg
      901 gcaggccgca cttcgggcat cgtcgttgcc cgacgggggg cttcgttgga tcgaaattct
      961 gtggttgcga cattggtgcc aagcctctcg accgcgtccc cttattgaat ggaagcgtat
     1021 cggactgtct ccaactgtct aatcactatc tcgtatattt ctcggtcgct ttccaataga
     1081 agttatacat cggaagcatg tttccttggc acgatttgat tgtgcgcggt ttttcggcga
     1141 aatctcgtct attaaaaaag tgctttcttt gttgcttcaa ttgcatcgat caaacttaag
     1201 gcgactccgg tatttctctg gtaattccgc gcgacgaaat tgttgaacaa ggcttacatg
     1261 caggaacgtc gcagatccag ccgctcagac gtgctcaagg gcgcgaaaat cgttctaggc
     1321 acgtctttag tcatcgactg tgtcgtgagc aatgtgacca acgtcggcgc acgcatacag
     1381 atcgcaaaca cagtcgaact tcccgaaggt tttggcctat cgtttgacgg cgggttctcc
     1441 atacggccgt gccggattgc ttggcgcact gtgaccgaaa ccggcgtgga attcatttaa
     1501 agggaaagcc tgcaggcaag tcggctttga tcgataattt acgccgtccc ctatgggctc
     1561 gaaaccgcac gctaggcggc gatggctacg tgcgtgattg agggccttca ccgtcccgat
     1621 ttcagagaga agctgcagtg cgcggcaaaa caatcctgaa ttcggtgaac tcgcccggcc
     1681 gtgtatcgac ctcgatcgag cccgcgtgct gcttgacgat gatgtcgtga ctgatggaaa
     1741 ggccgaggcc agtcccctcg cccgcgggct tggtcgtgaa gaatggatcg aacatctttt
     1801 ctttcacatt cggcggaatg ccgatgccgt tgtcgcgaat actgatttca acacgatcgc
     1861 caaggctccg cgtcgaggca acaagagtcg gctcatatcg atcgctgcca gcctctcctt
     1921 tacgtttggt tgcggcataa aaggcgttcg cgatcagatt cagcaaagct cgcgtgatct
     1981 cctgcggaaa cacgtctgcc tcgccggctg ccggatcaaa tgagcgctcg ataatgatgc
     2041 tgaagccctg cttctccgcc cgcgcgccgt gccaggccat gttaaggctt tcctcgacga
     2101 gggcattgat gtcgacatgc cggtgctcgc tggaggcttc gcgcgagtgc agcagcatgt
     2161 tcttgacgat cgcatcagcg cgcttgccgt gatgcacgat cttgtcgagg ttatcccgca
     2221 acgtatgggt cagctcattg atctgagtgc gcgccctatc ggtgaagggg aggcctttca
     2281 gggtgtcctg caattcatca atcagctcgg cagtgagagt cgagaaattg ttgacgaaat
     2341 tgagcgggtt cttcatctca tgcgcgatgc cagcagtgag ctgaccaagc gaggccaact
     2401 tttgcgtttg tacaagacga tcctgcgtcg cacgcaaatt ctccagcgac tcggtcagat
     2461 cgttggtccg ttgtcgtagc tcgttgagca gtcgtgtgtt ctcaatggcg atcacagcct
     2521 gagcggcaaa gttctgcacg acctcaatct gcttctcggt gaatggccgg acctctttgc
     2581 gatagatggc gataacgccc gctagttcgt tatccttgag catcggtacg gcaaccaatg
     2641 tacgaatgcc ggcgatctcg actccagtaa ccgccaatgg atggccatcg cgataggcgc
     2701 gatcctcccg catgtctgcg atctggagcg gcttcccggt ctgtgagacg cgcaccatgg
     2761 ggttgagcga acctgggtcg aataccattc cactctgcca ctggtcggtg taggccgaag
     2821 gtaacgggcc gtgaaatgca gcattccgga attcatttcc gtcctgcaac cacattgcgc
     2881 catagcttgc atcgcaaatc cgggttgcgt ttgccagcat ggcatcgaag accggcttta
     2941 attcacccgg cgagctactg atcactttca gcacgtcggc ggtcgcggtc tgctgctgca
     3001 acgattc
//
LOCUS       DATDHO010000766         2670 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_36577, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000766 DATDHO010000000
VERSION     DATDHO010000766.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2670
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36577"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            186..1220
                     /locus_tag="VIY07_14830"
     CDS             186..1220
                     /locus_tag="VIY07_14830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383066.1"
                     /translation="MPRVDFTSQDYMRDPATGLAKIRAAGPVVEVHFPIVGTTWITTT
                     SDLAGRVLKDSETFRMRKNGKVAGLRWWMPGWLRALAVSMLTMDEPDHTRLRSIVDEA
                     FRRRAILDMEPKIFAIADELAAELFADGSPADLVERYARKLPLTVICELLGLPRADRP
                     RFIAWANSLTRLTGMVSFLRMIAGIGPMKRYLEGRLQAARETGGEGLIAELIRVEKEG
                     GRISSEVFLVGQTRLAKMHLGVDYARQQVESAAVNNLAGGRLPQVTNRRETARADADV
                     TQALAVLVDHGAALEDQIVAISHAGMRLNGLEPCTTALTFRSEFWQETIARDPRDLAC
                     RQLFFPIAAW"
     gene            1184..2074
                     /locus_tag="VIY07_14835"
     CDS             1184..2074
                     /locus_tag="VIY07_14835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HEY6383067.1"
                     /translation="MQAALLPDRGVVKVVGDDARRFLNGLVTNDVASIAPGKPAFAAL
                     LTPQGKIIADFIVAEALAEDGGGFFLDCPRALAPDLVEKLNFYKLRAKVVCEDLSDVL
                     GVMAIWNNAGESEYGLSYPDPRLPALGTRVMLPPHLAAEAAADLGATLADAESYDAHR
                     VTLGVPRGGTDFIYGDTFPHEADMDQLNGIDFDKGCYVGQEVVSRVEHRASARSRVVP
                     IAYDDFSPLSGLPIMAGEKQVGTLCSTAKGRGLALMRLDRVEDALAKGIALEAGGISI
                     RLVKPEWAKFEWPGEEKVAS"
     gene            2071..>2670
                     /locus_tag="VIY07_14840"
     CDS             2071..>2670
                     /locus_tag="VIY07_14840"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEY6383068.1"
                     /translation="MSKSILHADGLQRCPWPKEDPLYIAYHDKEWGVPEFDDRALYEK
                     LVLDGFQAGLSWITILRKRENFRRAFDDFAPEKIARYQKRKIESLMKDAGIIRNRAKI
                     EGAVSSARAWLEIMESGPGFSKLLWGYVNGKPRLNKFRTTRQVPSETPLSQKISKDLV
                     ARGFKFVGPTIVYAFMQAIGMVNDHLVTCHRYAPLAKLAG"
BASE COUNT          518 a          805 c          828 g          519 t
ORIGIN      
        1 atggcagccc ttcctttcct cactttcaca ctctagggct tatcgcgtaa atgcgatgtg
       61 atgatcgtca caaaattaca cttttggtcg gtccatgcac gaattgtctt gcgcgcctgc
      121 gcgtccgcac tcgtagcatt gaggacgtcg ccctgaattc ccatctcttg gcttgaggag
      181 caacgatgcc gcgtgtggat ttcacaagcc aggactatat gcgcgatccg gccacagggc
      241 tggcgaagat cagggcagcc ggccccgtcg tggaagtgca cttcccgatc gtcggaacga
      301 cctggatcac cacaaccagc gatctggcgg ggcgcgtcct gaaggacagc gagacattca
      361 ggatgcgcaa gaacggcaaa gttgccggtc tgcgctggtg gatgccgggc tggctacgcg
      421 cgctcgccgt cagcatgctg accatggacg agccggacca tacgcgtctg cgcagtatcg
      481 tcgatgaagc ctttcgtcgc cgcgccattc tcgacatgga gccgaaaatt ttcgcaattg
      541 ccgacgagct tgcggccgag ctgttcgccg acggaagtcc agccgacctg gttgagcgtt
      601 atgcgcggaa gctgccgctg acagtcatct gcgaattgct cggtctgcca cgcgccgaca
      661 ggccccgctt catcgcctgg gcgaacagcc tcacccgtct cacgggcatg gtcagcttcc
      721 tccgcatgat tgccggcatt gggcctatga aacgctacct ggaggggcgc ttgcaggctg
      781 ctcgcgagac tggcggagaa ggtctgatcg cagaattgat ccgcgtcgag aaggaaggcg
      841 ggcgcatcag cagcgaggtc ttccttgtgg gtcagacccg gctcgcgaaa atgcacctgg
      901 gtgtcgatta cgcccggcag caagtggagt ccgcggcagt caataacctc gccggcggac
      961 gcttgccgca ggtcaccaat cgccgcgaaa cggcccgcgc ggatgccgat gtcacgcagg
     1021 ccctcgccgt cctggttgac cacggtgccg cccttgagga tcagatcgta gctatcagcc
     1081 atgctggaat gcgtctaaac gggcttgagc cctgcacgac agcgcttacg ttccgcagcg
     1141 agttctggca agagactatc gcgagagacc ccagagattt ggcatgcagg cagctcttct
     1201 tcccgatcgc ggcgtggtga aggtcgtcgg agacgacgcc cgacgctttc tcaatgggct
     1261 tgtgaccaat gacgtggcca gcatcgcgcc cggcaagcct gcgtttgccg cgctgctcac
     1321 cccgcaaggc aagatcatcg ccgatttcat cgtcgccgag gcactcgccg aggatggcgg
     1381 gggcttcttc ctcgattgcc cgcgtgcgct cgcaccggac cttgtggaaa agctgaattt
     1441 ctacaaattg cgcgccaagg tcgtctgcga ggacctgtcg gacgtgctgg gcgtgatggc
     1501 aatctggaat aatgcgggcg aaagtgagta cggcctctcc tatccggatc cgaggctgcc
     1561 cgcgctgggc acgcgtgtca tgctgccgcc gcacctggcg gccgaggcgg cggctgacct
     1621 cggcgccact ttagcggacg ccgaatccta cgacgcgcac cgcgtcacgc tcggcgtgcc
     1681 gcgtggcggc accgatttca tctatggcga taccttcccg cacgaagccg atatggatca
     1741 gctcaacggc atcgatttcg acaaaggctg ctatgttggg caggaagtcg tctcccgcgt
     1801 cgagcatcgg gccagcgcgc gcagccgcgt ggtgccgatc gcatatgacg atttttcgcc
     1861 gttgtcgggg ttgccgatca tggcaggtga aaagcaggtc ggcacgctgt gctcgaccgc
     1921 caagggtcga ggtctcgcgc tgatgcgcct cgatcgcgtc gaggatgcgc tcgcgaaagg
     1981 gattgcgctc gaagcaggag ggatttccat tcgcctggtg aagccggagt gggcgaagtt
     2041 cgagtggccg ggtgaagaga aagtcgcttc atgagcaagt cgattcttca cgccgacggc
     2101 ctccagcgtt gtccatggcc aaaagaggat ccgctttaca tcgcctatca tgacaaggaa
     2161 tggggcgtgc cggagttcga tgaccgggcg ctctacgaaa aactcgtgct cgacggattc
     2221 caggccggcc tttcgtggat cacaatcctg cgcaagcgcg agaattttcg ccgcgctttc
     2281 gacgacttcg cgccggaaaa aatcgcgcgc taccagaagc gcaagatcga atcgctgatg
     2341 aaggatgccg gcatcattcg caaccgcgcc aagatcgagg gcgcggtgtc gtctgcccgc
     2401 gcgtggcttg agatcatgga aagcggcccg ggattttcaa agctgctctg gggctacgtg
     2461 aacggcaagc ccaggctcaa caaattccgc acgaccagac aggtcccgag cgaaacgcct
     2521 ttatcgcaaa agatttcgaa ggatcttgtc gcgcgtggtt tcaaatttgt cggaccgacg
     2581 atcgtatacg ctttcatgca ggccatcgga atggtcaatg accatctcgt cacctgccac
     2641 cgctatgcgc cgctggcgaa gctcgccgga
//
LOCUS       DATDHO010000767         1611 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_434290, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000767 DATDHO010000000
VERSION     DATDHO010000767.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_434290"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1119)
                     /locus_tag="VIY07_14845"
     CDS             complement(<1..1119)
                     /locus_tag="VIY07_14845"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY6383069.1"
                     /translation="MHEPTLDQFNNRGGLVSPAKPRVVIIGAGFGGLEAAKALKRAAA
                     DVIVIDRHNHHCFQPLLYQVATAALSPADIAWPIRHILRPQRNATVLMEEVQGIDPEK
                     KVLHTQYGDIAYDYLVIATGATHSYFGHDEWSKFAPGLKRIEDATRIRRSILIAFERA
                     ELTQDPDQQRRLLTFVIVGGGATGVEMAGAIADVAGQTLAADFRRIDPRSARIVLIEA
                     GPRLLPTFPPSLSDYALRTLTRSGVEVQTDTLVTNCDANGVDLKNGRIDAGTVIWAAG
                     VTASPAVRWLNTEADRAGRVKVRADLSVPGHPEIFVIGDTAAVADSKGQPVPGIAPAA
                     KQMGKYVGKLISARIAGRELQKPFRYMHLGELATIGRRA"
     gene            1186..>1611
                     /locus_tag="VIY07_14850"
     CDS             1186..>1611
                     /locus_tag="VIY07_14850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate family dehydrogenase"
                     /protein_id="HEY6383070.1"
                     /translation="MATHNLLLLPGDGIGPEVMAEVRRVIDLFNEKGPERFNTEEALV
                     GGCCYDAHGVAITDATVEKAKSADAVIFGAVGGPKWDKVPYDVRPEAGLLRLRKDLAL
                     FANIRPAIVYPALADSSSLKRDVVEGLDIIILRELTGGVY"
BASE COUNT          302 a          501 c          489 g          319 t
ORIGIN      
        1 ggcgcgacgg ccgatggtcg ccagctcgcc gagatgcatg taacgaaacg gcttctgcaa
       61 ctcgcggcct gcgatgcggg cggaaatcaa tttcccgacg tattttccca tttgctttgc
      121 ggcgggggca attcccggca ccggctgccc cttgctgtca gcaaccgccg ccgtatcgcc
      181 gatgacgaaa atctccggat ggcctggcac cgacagatca gccctgactt tgacccgccc
      241 ggcgcgatcg gcctccgtat tgagccagcg caccgccggc gaggctgtca cgcctgctgc
      301 ccagatcacg gtgccggcat cgatgcgccc gtttttgaga tcgacgccgt ttgcatcgca
      361 attggtgacg agggtatcgg tctgcacttc cacgccgctc cgcgtcaacg tgcgcagcgc
      421 atagtccgaa aggcttggcg gaaatgttgg cagcaacctc ggtcccgctt cgatcagcac
      481 gatgcgcgcg gagcgcggat cgatgcggcg aaaatccgcg gcaagcgtct gccccgcaac
      541 gtctgcgatc gcgccggcca tttcgacgcc cgtagcgccg cctccgacaa tcacgaaggt
      601 cagcagtcgt cgctgctggt ctggatcctg cgtcagttcc gcacgctcga aggcgatcag
      661 gatgctgcga cgaatgcgtg tcgcatcctc gatgcgtttc aagcccggcg caaatttcga
      721 ccattcgtcg tgaccaaaat aggaatgcgt cgcgcctgtc gcgatgacca ggtagtcata
      781 ggctatgtcg ccgtattgcg tatgaagaac tttcttttcc ggatcaatgc cctgcacttc
      841 ctccatcagc acagtggcgt tgcgctgggg acgcaggatg tggcggatcg gccaggcaat
      901 atcagccggc gacaacgccg cggttgccac ctgataaagc agcggttgga aacaatgatg
      961 attgtgccga tcgatgacga tcacatcggc tgctgcgcgc ttgagcgcct tggcggcttc
     1021 cagcccgcca aagccggccc cgatgatcac aactctgggc ttggccggtg acacgagtcc
     1081 tcctcgattg ttgaactggt ccagtgtcgg ctcatgcatg gcggttgcca agcctgcacc
     1141 gaagctttag caatccgccc aacgaattcc tgcgaggtaa ggcgtatggc gacccataat
     1201 ctcctgcttc tccccggcga cggcatcggc cccgaagtca tggccgaggt gagacgcgtc
     1261 atcgatctct tcaacgaaaa gggccccgag aggttcaaca ccgaagaggc gctggtagga
     1321 ggctgctgtt acgacgcgca cggggtcgcg atcaccgatg ctaccgtgga gaaagcgaaa
     1381 tccgccgacg cggtgatctt cggcgcagtt ggtggaccga aatgggacaa ggtgccttac
     1441 gacgtgcggc ccgaggccgg gttgcttcgg ctgcgcaagg acctcgcgct gttcgccaat
     1501 atccgcccgg ccatcgttta tcctgcgttg gcggattcct cgtcgctcaa gcgcgacgtg
     1561 gtagaaggtc tcgacatcat tatcttgcgt gaactgaccg ggggcgtcta t
//
LOCUS       DATDHO010000768         1982 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_286452, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000768 DATDHO010000000
VERSION     DATDHO010000768.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1982)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1982)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1982
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286452"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VIY07_14855"
     CDS             complement(<1..508)
                     /locus_tag="VIY07_14855"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6383071.1"
                     /translation="MNPIVNLSRRGFLKAGIAASGGLLLGFHTPISGRWAVAATTRSE
                     QATLNSWVRIARDGTVTVIVGQSEMGQGIMTAIPMIIADELEAEWSKVRTEQAPANPA
                     YGDPMRGGEQSTNGSRSIRNMLTLWRRAGAAAREMLVVAAAKEWGVPLEECVAEQSVV
                     THRPSGRKL"
     gene            complement(505..975)
                     /locus_tag="VIY07_14860"
     CDS             complement(505..975)
                     /locus_tag="VIY07_14860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY6383072.1"
                     /translation="MIPITVNGKRHQVDVDADTPLLWVLRENLSLTGTKFGCGIAQCG
                     ACTVHADGQPIRSCITQIGAVKGKRITTIEGLSPNGSHPLQKAWIAEEVPQCGYCQSG
                     QIMSAAAMLAAKPRPTDADIDAAMSGNICRCGTYQRIRRAIHRAAGTLAKGGVK"
     gene            1210..>1982
                     /locus_tag="VIY07_14865"
     CDS             1210..>1982
                     /locus_tag="VIY07_14865"
                     /inference="COORDINATES: protein motif:HMM:NF014074.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383073.1"
                     /translation="MSTKRAHRMRWAGLNLITALLTIIGIESASLMQPPSPVVYVAPI
                     EGIIDLGLAPFIQRVLKQATDEGAAAVILEINTFGGRVDAAVLIRDSLLNARVRTVAF
                     VNKRAISAGALISLAAEKIAMADGGTIGAATPVQAGQPGAAAQPVEEKTVSYVRKEFR
                     ATAESRKRPPLIAEAMVDADVEIPGLIEKGKLLTLTTEEALKHKVADFRADTIEQVLK
                     QLGLEGADVRRAEPNWAENLVRFFTHPLVSSLLITIGMLG"
BASE COUNT          391 a          569 c          605 g          417 t
ORIGIN      
        1 taagcttcct gccggaaggg cgatgagtca ccacgctctg ttccgcaacg cattcctcta
       61 gcggtacgcc ccactctttg gccgcagcga caaccaacat ctctctggcg gccgcgccgg
      121 cacggcgcca aagcgtcaac atgttgcgaa tgctccggct gccgttggtc gattgctctc
      181 caccccgcat gggatcgcca taggccggat ttgccggcgc ttgctcggtc cggacctttg
      241 accactcggc ttccagttcg tcggcgatga tcatgggaat cgccgtcatg atgccctgtc
      301 ccatctccga ctggccgacg atgacggtca cggtgccgtc tctggcgata cggacccaag
      361 aattgagcgt cgcttgttct gatcgcgttg ttgcggctac agcccatcgc ccggagatcg
      421 gggtatgaaa acccagtaac aagccgccgc tcgcagcgat ccctgctttg agaaaaccac
      481 gtcggctcag attaacgata gggttcattt cacacctccc ttcgccaaag tacccgcggc
      541 gcggtgaatg gcgcggcgga tacgctggta tgtgccacag cggcagatgt tgcccgacat
      601 cgccgcatcg atgtcggcat ccgtcggcct gggctttgct gccagcatgg ccgcggccga
      661 catgatctgc cctgattgac agtagccgca ctggggaacc tcctcggcaa tccaggcttt
      721 ctgaagcggg tggctgccgt tcggcgacag tccttcgatc gtggtgatgc gcttaccttt
      781 gacggctcca atctgcgtga tgcaagaacg gatcggttgg ccatcggcat gcacggtgca
      841 agcgccgcac tgcgcgatgc cgcagccgaa tttggtgccg gtcaaactga ggttttcacg
      901 gagcacccag agcaggggag tgtcggcgtc gacgtctacc tggtgccttt tgccgttcac
      961 ggtgatgggg atcatgggtc cctccttttg ttatcaagta tcaagtgaac gtggttgaat
     1021 tctgggttct gcatatcaca cgtcggcatc gaggtcgata aggtaacagg acgttcatat
     1081 ttttggtgag ctagctcgct tgcgctgttg cgcgtccagc agtttgaatg agtatcgtgg
     1141 ttgccgccaa aagcacgtcg taacggtagc ggaaagctga tatagaagct caggccacgg
     1201 gtaactttca tgagcacaaa gcgagcgcac cgaatgagat gggcggggct aaatttaatc
     1261 accgcgctgc tcacgataat cgggatcgag agtgcgtcgt tgatgcagcc gccatcgccg
     1321 gtggtttacg ttgcgcccat cgagggcatc atcgatctcg ggctggcgcc gtttattcag
     1381 cgggtgctca agcaggccac ggacgaaggc gccgcggccg ttattcttga aatcaataca
     1441 ttcgggggac gggtggacgc cgcagtgctc atacgcgata gtctcttgaa cgcccgagtg
     1501 cgcacggtcg ccttcgtaaa caagcgtgct atctcggcgg gtgccctgat cagtctggcc
     1561 gcggagaaaa tcgccatggc cgacggcgga accattggcg ccgcaacgcc agtgcaggct
     1621 ggacagcccg gagcggccgc gcaaccggtg gaagaaaaga cggtttccta cgttagaaaa
     1681 gaatttcgcg ctaccgcgga atcccgcaaa cgccctccgc tgattgccga ggcgatggtg
     1741 gacgcggacg tggagattcc tggtttgatt gagaagggaa agcttttgac cttgacgaca
     1801 gaggaagccc tcaagcacaa ggttgcggat ttccgcgccg ataccatcga gcaggtgcta
     1861 aagcagctgg gtctagaagg ggcagacgtc cggcgcgcag agccgaattg ggcggaaaat
     1921 ctggtccgct ttttcaccca tccgctcgtc agctctctgc tgatcacgat agggatgctc
     1981 gg
//
LOCUS       DATDHO010000769         4965 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_335889, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000769 DATDHO010000000
VERSION     DATDHO010000769.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4965)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4965)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4965
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335889"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            165..614
                     /locus_tag="VIY07_14870"
     CDS             165..614
                     /locus_tag="VIY07_14870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018409492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEY6383074.1"
                     /translation="MSEYKVTLKWERGDAEFSYQKYPRDHIWAFDGGPAITATAAPEY
                     LGNPAHVNPEEAFVASLSSCHMLTFLAIACKQKFVFDSYEDEAVGLMEKNADGKLAIA
                     RVELRPRIKWGGDRRPSAEELDKMHHAAHQNCFIANSVRTEVMVTKL"
     gene            1408..2568
                     /locus_tag="VIY07_14875"
     CDS             1408..2568
                     /locus_tag="VIY07_14875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383075.1"
                     /translation="MRALRTFTVAAAAGLLALVGAADQASAQIKIGAVLSVTGPASFL
                     GDPEKRTLEIYVDEINAKGGVNGQKLQLVVYDDGGNADNARTFATRLVEEDKIAAMVG
                     GSTTGSTMAMIPVFEEAKIPFISLAGAIQIIQPVRQWVFKTPHTDRMACEKIFADLKA
                     RKLTTIGLISGTDAFGKSMRDQCVAVAGNAGITIAIEESYGPRDSDMTPQLTNIRNKA
                     GVLAVVNAGFGQGPAIVTRNYRQLGITLPLYQSHGVASKQFVELAGPAAEGVRLPAAA
                     LLIADKLPDNDRQKPVVQNYSRTYQQKTGQAVSTFGGHAYDGLMILVEAMQRAKSADT
                     AKVRDEIERTKGYVGTGGIVNMSPTDHMGLDLTAFHMLEIKGGDWTLIPGGS"
     gene            2661..3533
                     /locus_tag="VIY07_14880"
     CDS             2661..3533
                     /locus_tag="VIY07_14880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383076.1"
                     /translation="MAELLQFVFSGLTVGAIYALVALGFTLIYKASDIINFAQGEFVM
                     LGGMTTVFVAHAGVPLPLAAPIAIVVTTAIGLALHRFAIEPARGATAVALIMITIGAS
                     IFLRGIAQIVFDRRFHSLPPLLGADPIQFGGAAILPQSLVVLATAAVIVVVLWLFIER
                     TIFGKAVIATAANRLAARLVGVDTRRIVAFSFAVSAAMGAIAGVLITPITLTSYDAGT
                     LLALKGFAAAMLGGIGSAPGAVVGGLLIGMFEALAAGYLSSNYKDAVAFLIILIVLVA
                     IPQGLFGRAKIERV"
     gene            3536..4480
                     /locus_tag="VIY07_14885"
     CDS             3536..4480
                     /locus_tag="VIY07_14885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383077.1"
                     /translation="MRNLLETRLLPPIAVAAIFVSIPWFFPSAYYYRVGALVFIFALA
                     VAGLNLLMGFAGQVSLGHAGFLGIGAYSVAIGPAHFGVPSWLCLFAGAALSAAVAFLV
                     GRPILRLKGHYLAVATLGFGLLVAIVLTNEAGLTGGPDGMAVPRLSVFGWSVRGSVVW
                     YWVAGTTFVVGFVLALNVMESPTGRALQAIHDSEIAARVLGIDVARKKLTVFIISAVY
                     ASVAGSYLALFNGHVTPDVAGFLRSIELVAMVVLGGMGSILGSLVGAGLLVVLPQTLT
                     IFHEYEQALLGLILIVFMIFLRRGIVPSLAAIIAGWRK"
     gene            4477..>4965
                     /locus_tag="VIY07_14890"
     CDS             4477..>4965
                     /locus_tag="VIY07_14890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6383078.1"
                     /translation="MMILQTDRLSIAFGGVRAIDAVTIAVESGQVFSIIGPNGSGKTT
                     LFNLVSGLYTPDDGSIRFAGETATGLAPDELARRGLSRTFQNLQIFYRMSVLENVMVG
                     RHRHERTGILADLLHLPSVARQNKATAEAARTALARVGLADLANRPAGSLAYGALKRL
                     EIA"
BASE COUNT          936 a         1470 c         1531 g         1028 t
ORIGIN      
        1 taaggtgtgc tcaatgacgg atgacatctg ttggcgcatc ttctttcggg caaaagggag
       61 atcgcgttga caccccagtc gtcacggacc gctgccgcca ttactattct tgacaagcgc
      121 aagccggtgg ttgcggcaca ctcgcgcgta ccctatacaa agacatgtcc gaatataaag
      181 taactttgaa atgggagcgc ggggacgctg agttttccta tcaaaagtat ccgcgtgatc
      241 atatttgggc gtttgacggc gggcctgcga taacggcaac cgcggcgccc gaatatctcg
      301 gcaatccggc ccatgtcaat ccagaagagg cgtttgtcgc ttcactctcg agctgtcaca
      361 tgctcacgtt tctggcgatt gcgtgtaagc agaagttcgt attcgattcc tatgaggacg
      421 aggcggttgg ccttatggag aagaatgccg acggcaagct cgcaatcgcg cgggtcgaac
      481 tacgcccaag gattaagtgg ggtggtgacc gacgacccag tgcggaagag cttgataaaa
      541 tgcatcatgc cgcccaccag aattgtttca ttgcaaattc ggttagaacc gaggtaatgg
      601 tgacgaaact ctagtcgctg gtctggtcgt gcgaaaaatg cagacgcgcg tgatgtcaag
      661 tcatagcatc cggctcgcca tcggttcttt ggcgttgtgt ttcgcgagct cggccggggc
      721 ccaggaaagc ttggagcagg gaaagaccgc cgcccaactt tacgcggcca actgcgcgag
      781 ctgtcataaa tcgccacaaa gcgtgaccaa ggcgacaggg actttcgggc tcgagagcta
      841 cctccgggag cactacacgc ccagccctca atcggccgcc atcattgccg cttatctcga
      901 agggctagaa aagcagtcgt cgggatctgt tcgtgctcgg ggcgccaaac aatcgagcca
      961 agcgaatgcc ccaaagccat caccgaatga aaccaaggag gacaaatctc cggtagcacg
     1021 ggccctcaat agtgcggcag acaccgcgga acgaacgctc aataggtttc ttcaggcgat
     1081 aaagccggag aatgactaac ctgaaggaca gcgcgtggtg ccgccgccaa ggcttcgtgc
     1141 ccgaaatgcg aaatgcgggc gtgttggctg gaatattcgt aaaggaccgc tggaaagcgg
     1201 acatccgaat aggctgcgat aagaagcatt atcggaagtg acctattgta catgggtgcc
     1261 ggatatcggg catcgtcgcg cgcatcaaac tccggcttca aacctgcacc cacctccgcc
     1321 gcggttcctg ccttgaactc acagggagtg gatttgtgcc ctccgatagg tcttaattgg
     1381 cgatgtctca ttgtgacggg gagagccatg agggcattgc gcacctttac cgtagccgct
     1441 gctgccggtc ttcttgccct ggtcggtgcc gctgaccagg cctcggcgca aatcaagata
     1501 ggcgccgtcc tctcggtgac cggaccggcg tcatttctcg gcgatccgga aaagaggacg
     1561 ctggaaatct atgtcgacga gatcaacgca aaaggcggcg tgaacggcca gaagctgcag
     1621 ctggtcgtct acgatgacgg cggcaacgcc gacaatgcgc gcaccttcgc cacccggctg
     1681 gtggaagaag acaagatcgc cgccatggtc ggcggcagca cgaccggctc gacaatggcg
     1741 atgatcccgg tcttcgaaga ggcgaagatc ccgttcatct cattggccgg agccatccag
     1801 atcatccagc ccgtgcgtca gtgggtcttc aagacgccgc acaccgacag aatggcatgc
     1861 gaaaagatct ttgccgatct caaggcgcgc aagctgacca ccatcgggtt gatttcagga
     1921 acggatgcgt tcggaaagtc gatgcgcgat cagtgcgtcg cggtggcggg caatgccggc
     1981 atcaccatcg cgatcgagga aagctacggg ccgcgtgaca gcgacatgac cccgcagctc
     2041 accaatatcc gcaacaaggc gggcgtgctt gcggtcgtga atgcggggtt cggccagggc
     2101 ccggcgatcg tgacgcgcaa ctatcgtcag ctcggaatca cgttgccgct gtaccagagc
     2161 cacggcgtcg cctccaaaca gttcgtcgaa ctcgccggcc cggcagcgga aggcgtgcgg
     2221 ctgccggccg ccgcgcttct catcgcggac aagctcccgg acaacgatcg gcagaagccc
     2281 gtcgtgcaga attattcccg cacctatcag cagaaaaccg gccaggcggt ctcgaccttc
     2341 ggcggtcacg cctatgacgg cctcatgatc ctggtcgagg ccatgcagcg cgcaaagagc
     2401 gccgatacgg ccaaggtgcg cgacgaaatc gagcggacaa aaggctacgt cggcacggga
     2461 ggaatcgtga acatgtcgcc gaccgaccat atgggcctcg acctgacggc attccatatg
     2521 ctcgaaatca agggcggcga ctggacgctg atccccggcg gcagctgaga tgatggcgcg
     2581 atacgccggg cagccgctgc cgcgctagct tgcgactgtc acatccgaga cttgtaagac
     2641 cttacgaggc attcgaggcg atggccgagt tgctacaatt tgtcttctcc ggcctcaccg
     2701 tgggcgccat ttacgcgctg gtcgcactcg gatttacgct gatctacaag gcgtcggaca
     2761 tcatcaattt cgcgcaaggc gagttcgtga tgttgggcgg aatgacaacc gttttcgtcg
     2821 cgcatgccgg cgttccattg ccgcttgccg cacccatcgc catcgtcgtg acaaccgcca
     2881 tcggcctggc cttgcatcgc tttgcgatcg agcctgcgcg cggggcgaca gcggtcgccc
     2941 tgatcatgat cacaatcggc gcctcgatat ttctgcgcgg catcgcccag atcgtttttg
     3001 accggcgctt ccacagcctg cctccgcttc tcggcgccga tccgattcag ttcggcgggg
     3061 cggccatact gccgcaaagc ctggtcgtct tggcaactgc agccgtgatc gtcgtggtgc
     3121 tttggctctt catcgagcgc accattttcg gcaaggcggt gattgcgacg gcagccaacc
     3181 gcctggcggc gcggctcgtc ggcgtcgata cccggcgcat tgtcgctttt tcgtttgccg
     3241 tctcggcggc gatgggggcc attgccggcg tcctcatcac gccgatcacg ctgaccagct
     3301 acgatgcggg gacgttgctg gcgctgaagg gcttcgcggc ggcgatgctc ggaggaattg
     3361 gcagcgcgcc gggagccgtg gtcggcggcc tcctgattgg aatgttcgag gccctggctg
     3421 caggctatct gtcctcgaac tacaaggacg ccgttgcctt cctgatcatc ctgatagtgc
     3481 tggttgccat tccccaaggc ttgttcggcc gggccaagat cgagcgggtt tgaacttgcg
     3541 caacctgctg gagacacggt tgctgccgcc catcgcggtt gccgcgatct ttgtcagcat
     3601 cccgtggttt tttccatcgg cctattacta tcgcgtcggc gcgctcgttt tcatttttgc
     3661 gctggcggtt gcaggtttga acctgctcat gggtttcgcc ggacaggtca gcctgggcca
     3721 cgccggcttt ctcggcatcg gtgcctattc ggtcgcgatc ggtcctgcgc atttcggagt
     3781 gccgtcgtgg ctatgcctgt tcgccggtgc ggcactctcg gctgcagtcg catttttagt
     3841 gggccggccg attctccggc tcaagggaca ctatctcgcc gtcgcgaccc tgggtttcgg
     3901 actgcttgtc gcgatcgtgc tgaccaacga agcaggcttg accggcggtc cggatggcat
     3961 ggccgttccc aggctgtcgg ttttcggctg gagcgtgcgg ggatcggttg tctggtactg
     4021 ggtcgcaggc acgacctttg tcgtcgggtt tgtgctcgcg ctgaacgtga tggagagccc
     4081 caccggccgc gcgctgcagg ccattcacga cagcgagatc gccgcgcggg tcctcggtat
     4141 cgatgtggcg cgcaagaaac tcacggtctt catcatttcc gccgtgtacg cgtcggtggc
     4201 cggatcctac ctggccctgt tcaatggcca tgtcacgccc gatgttgcgg gatttctccg
     4261 atcgatcgaa ctggtcgcga tggttgtcct cggcggcatg ggctcgattc tgggttcgct
     4321 ggtgggagcc ggcctgctgg ttgtcctgcc gcagacactc acgattttcc atgaatacga
     4381 gcaggcgctg ctcggactga tcctgattgt gttcatgatc ttcctgcggc gcggcattgt
     4441 gccatcgctc gctgcgatca ttgccgggtg gcgcaaatga tgattctgca aaccgaccgg
     4501 ctgtccattg cattcggtgg cgtgcgggcg atcgatgccg tgaccatcgc tgtcgaatcc
     4561 ggtcaggtgt tttcgatcat cggacccaac gggtcgggca agacaacgct gttcaacctg
     4621 gtgtcgggac tttacacgcc cgatgacgga agcatcaggt tcgccggtga aacggcgaca
     4681 ggccttgcgc ctgacgaact tgcgcggcga ggattgtcgc ggacgtttca aaacctccag
     4741 atattttacc gaatgtccgt gcttgaaaat gtgatggtcg ggcgccatcg ccatgagcgg
     4801 accggcattc tggctgactt gctgcacttg ccgtcggtcg cccgccagaa caaggctacc
     4861 gcggaagcgg cgcggacggc gcttgcccgg gttggcctcg ccgatctggc caaccgtccg
     4921 gcaggttcgc tcgcctacgg cgcgctcaag cgtcttgaga tagcc
//
LOCUS       DATDHO010000770         2397 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_36980, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000770 DATDHO010000000
VERSION     DATDHO010000770.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2397)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2397)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2397
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_36980"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..363)
                     /locus_tag="VIY07_14895"
     CDS             complement(<1..363)
                     /locus_tag="VIY07_14895"
                     /inference="COORDINATES: protein motif:HMM:NF015592.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEY6383079.1"
                     /translation="MIKHDLTLLPELIYPIEEWRLAERRFAPQFLSQGETIFAIANGY
                     LGMRGTYEEREPAYRHGTFVNGFHETWPIPYGERAFGFATTGQTIVNLPDGKIIRLYV
                     DDEPFDLGSARILRYDRAL"
     gene            complement(422..1177)
                     /locus_tag="VIY07_14900"
     CDS             complement(422..1177)
                     /locus_tag="VIY07_14900"
                     /inference="COORDINATES: protein motif:HMM:TIGR02009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase family hydrolase"
                     /protein_id="HEY6383080.1"
                     /translation="MSLSHKPITPDRFDAVLFDLDGVLTYTAKIHSSCWKTMFDDFLR
                     HRAAEKKEPFRPFDIATDYKRYVDGKLRYDGVRSFLASRDIALAEGTPEDPPTVETVC
                     GLGNRKDELVKAAIGQGEVESYPGSVALVRRLLEQGIRTAVVSASNNCEQVLRAAGIL
                     DLFELRVDGVVASQLGLPGKPAPDTFLEAARKLGVSPARAVVVEDAIAGIQAARAGGF
                     GLIVGVDHEGRSGDALRTEGADVVVTDLAELLN"
     gene            complement(1215..1469)
                     /locus_tag="VIY07_14905"
                     /pseudo
     CDS             complement(1215..1469)
                     /locus_tag="VIY07_14905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018209289.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoketolase"
     gene            complement(2133..>2397)
                     /locus_tag="VIY07_14910"
     CDS             complement(2133..>2397)
                     /locus_tag="VIY07_14910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEY6383081.1"
                     /translation="SNTSSALVMMPIGLATASELGVSALPLMMGVAMGASASFLTPFA
                     NGVSLMVYGPGGYRFGDFWRLGLVVLIWALIVTVVVIPLYWKF"
BASE COUNT          494 a          734 c          702 g          467 t
ORIGIN      
        1 gagggcacga tcgtagcgaa gaatcctcgc actgccgagg tcgaacggtt cgtcgtccac
       61 gtacaggcgg atgatcttgc cgtctggcag gttcacgatc gtctggccgg tcgtggcgaa
      121 gccaaaggca cgttcgccgt aagggatggg ccaggtctcg tgaaagccgt tgacgaaggt
      181 gccgtgacga taggccggct ccctctcctc ataggttccg cgcatgccca ggtatccatt
      241 ggcgatggcg aaaatggtct ccccctggga aaggaactgc ggggcgaatc tcctctccgc
      301 caagcgccat tcttcgatcg ggtaaattaa ttctggaagc agagtcaggt cgtgcttgat
      361 catcgaagtt acggctccca gaggcatctg agaagagcat ccgagaagac gggaagcgga
      421 ctcaattcag caactccgcc aggtccgtca caaccacgtc ggccccctcc gtccgcaggg
      481 cgtcgccgct cctcccttcg tggtccacgc cgacgatcag gccgaatccg cccgctcggg
      541 ccgcctggat gcccgcgatg gcatcctcca ccactacggc gcgggcgggg ctgacgccga
      601 gcttccgagc cgcttcgagg aaggtgtccg gcgcgggctt tcccggaaga ccgagctgac
      661 tggcgaccac gccgtccact cgcagctcaa acaagtcgag gatgcccgcg gcccgcaaca
      721 cctgctcgca gttgttgctc gccgacacca ccgcggtgcg gatgccctgc tccaggagcc
      781 ggcggaccag cgcgaccgag ccgggataag attcaacctc cccctggccg atcgccgcct
      841 taaccagttc gtccttgcgg ttgcccagac cgcacacggt ctcgacggtc ggcgggtctt
      901 ccggcgtccc ctcagccagc gcgatgtcgc gcgaggccag gaaactcctc acgccgtcat
      961 agcggagttt tccgtccacg tatcgcttgt aatcggtggc aatgtcgaac ggtcggaacg
     1021 gttccttctt ctctgccgct cggtggcgga ggaagtcgtc gaacatcgtt ttccagcagc
     1081 tcgaatggat tttggcagtg tacgtgagaa cgccgtccag gtcgaacagc accgcgtcga
     1141 accgatccgg ggtgatgggc ttgtgtgaaa ggctcatggt ggccctggct gctggttatg
     1201 agtttttgcc ccttttacac gttgtcgccc tcggtcgagg tgcgagcgga gcgagccgcc
     1261 gcggcgccgt cccgcgaaga ccagcgccag cccgcgatct ccggcatgtc gtcgccgtgt
     1321 tcccgaatgt agtgtttgtg ctcgatcagt ttctcctcga ccgcctgata gaaataggcg
     1381 gcgcgggcgc ccagttgcgg cagttggtcg atcacagcct ccaccagatg gaagcggtcc
     1441 atgtcgttga gcaccaccat gtcgaagggt gcccgaaagt aagcgtccat cttgcgcaat
     1501 tcttccgcgg agagaggggc ctgccaccgc cttgccgccg tctgctgttt tcggtttcgc
     1561 gtcggtggtt acgggtgcca tcggtgttcc ccttgggtgc tatgaataag aattttaaac
     1621 gaccttttct atgacctcgt catatcgcac gacttgcaga gacgtcaatt cctttttctg
     1681 cttgatgaaa aagccactgt tgtgccggtc ggctcggccg gagagcagtc gggaggtgcg
     1741 caagaggtgc cttatggcgc cgctcggtcg aagtcagagc gaggcgcgcc gtcgcttcca
     1801 ccgatcgact gcataaagtc cgacgagctg cataggcatg ctcaaaaaag caacggccga
     1861 aatgagccca atttcccaat gagaggcacc caacgcgtgc gcaaacgccg caagaaacgg
     1921 atcggcaaag aaagcattca tcgatgttgt gcaaatgccg ccgaagataa ttgagcgcat
     1981 gttctttgaa ggagtatcca tatgcgctcc caaattcttt aggggcccga gcgaacgcaa
     2041 attgggctgt gtgcaggtaa aaccatcgcg gccgcgagta tgacctcgcg agctggcagg
     2101 cgcacgcgct attgcagctg ctccacctct tttcagaatt tccagtaaag aggaatcacg
     2161 actactgtga cgatcaacgc ccagatcaag acaacgagac cgagtctcca aaaatcccca
     2221 aaccgatatc cacccggccc atacaccatc aagcttaccc cgtttgcaaa aggcgttaga
     2281 aaggatgcgc tggcgcccat agcaacaccc atcatcaggg gaagcgcaga aacacctaac
     2341 tcggaagccg tggccaagcc aatcggcatc atgaccagcg ccgatgatgt gttagaa
//
LOCUS       DATDHO010000771         1654 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_479578, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000771 DATDHO010000000
VERSION     DATDHO010000771.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_479578"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..801)
                     /locus_tag="VIY07_14915"
     CDS             complement(<1..801)
                     /locus_tag="VIY07_14915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6383082.1"
                     /translation="MNDDIPFDKRLELAPDLADEPVPGVRRIMANNPGPFTFKGTISY
                     IVGHGKVAIVDPGPDDPAHIRALLDAVRNETVTHIFVTHTHRDHSPAVPAIKKATGAT
                     VYAEGPHRAARPLNIGELNPLDASADRDFQPDVALRDGAVVTGDGWAIEAVATPGHTA
                     NHMAYALKGKNTLFAGDHVMAWATSIVAPPDGAMSDYMDSLAKLARRTEATYFPGHGP
                     AISDAPRFVNYYILHRKAREASILHRLSKGATDIPTIVRAIYIGIDPRL"
     gene            complement(931..>1654)
                     /locus_tag="VIY07_14920"
     CDS             complement(931..>1654)
                     /locus_tag="VIY07_14920"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEY6383083.1"
                     /translation="SSALNLSCLTVTGKSIGENVAGAEVYKPEVIHPLSDPVSREGAT
                     AVLTGNLAPRGCVMKPSAADKRLLRHRGKVIAFDDYNHMAREVERDDLDVTPDHILVL
                     KNGGPKGGPGMPEWGMLPIPKKLLKQGVRDMLRISDARMSGTSYGACILHVAPESFVG
                     GPLAFVRTGDEIEVDVPARRIHLHVAEEEMVRRRAAWKQPAPRYPRGYGALYSQHIGQ
                     ADEGCDFDFLSAPGTIPEPEIH"
BASE COUNT          307 a          504 c          512 g          331 t
ORIGIN      
        1 caggcgcgga tcgatcccga tgtagattgc gcgcacgata gttggaatgt cagtcgcacc
       61 cttcgacagg cgatgcagga tcgaagcctc acgcgccttg cggtgcagga tgtaataatt
      121 gacgaaccgc ggcgcgtccg aaatggccgg cccatggccg ggaaaatatg tggcttctgt
      181 acgccgcgcg agcttggcca acgaatccat gtagtcgctc atcgctccat caggcggagc
      241 cacaattgag gttgcccagg ccatgacgtg atcgcctgcg aacagagtat ttttcccttt
      301 aagggcatat gccatgtggt tggcagtatg acccggcgtc gcgaccgcct cgattgccca
      361 tccatcgccc gtcacaacag caccatccct caaggcgacg tccggctgaa agtcgcggtc
      421 ggcgctagca tcgagcgggt taagctcgcc aatattgagg ggtcgggcgg cccggtgagg
      481 gccttcggcg tacacagttg caccggtcgc cttcttgatc gcgggcaccg ccggtgaatg
      541 gtcgcgatga gtgtgggtga cgaagatatg cgtcaccgtc tcgttgcgca cggcatcgag
      601 cagcgcgcgg atatgcgcag gatcgtccgg acccggatcg acaatcgcca ctttgccgtg
      661 gccgacgatg taactgattg tgcctttgaa tgtgaacggt cccggattgt tggccatgat
      721 ccgccgcacg cccggaaccg gctcgtccgc caagtcgggc gcgagctcga gacgcttgtc
      781 gaaaggaatg tcatcgttca tgacgctcgc atccatcgcg gccggggttg tcttgcccgt
      841 ttacgcctcc gttgcccgac tatctaaaga cgtggatgcc cggcacaagg ccgggcatgg
      901 cgctgtgtct agttcagcgc cgccaaaatt tcaatgaatc tcaggctcgg gaatcgtgcc
      961 cggcgctgag agaaaatcga aatcgcatcc ttcatcggcc tgaccgatgt gttgcgagta
     1021 aagcgcgccg tagccgcgcg ggtatcgcgg cgcgggctgc ttccaggcgg cgcggcggcg
     1081 gaccatctcc tcttcggcca cgtgaagatg aatccggcgc gcggggacat ccacctcgat
     1141 ctcgtcgccg gttctgacga aggcaagcgg cccgccgaca aagctttccg gagcaacatg
     1201 aagaatgcag gctccatagc tggtgccgct catacgcgcg tccgaaatgc gcagcatatc
     1261 gcgaacgccc tgcttcagca gctttttcgg gatcggcagc atgccccatt ccggcatgcc
     1321 tggcccgccc ttcggaccgc cgttcttcag cacgagaata tggtcgggtg tgacgtcaag
     1381 atcatcccgc tcgacctcgc gcgccatgtg attgtagtcg tcgaacgcga tgaccttgcc
     1441 ccggtggcgc agcaatcgct tgtcggccgc cgaaggcttc atcacgcaac cgcgcggagc
     1501 caggtttccg gtaagcactg cggttgcgcc ttcgcgcgac acgggatccg agagcggatg
     1561 gatgacttca ggcttgtaga cttccgcgcc ggctacgttt tcgccgatgc tttttcccgt
     1621 aacggtaagg catgataggt tgagcgcgct gctg
//
LOCUS       DATDHO010000772         5039 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_37019, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000772 DATDHO010000000
VERSION     DATDHO010000772.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5039)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5039)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5039
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37019"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VIY07_14925"
     CDS             <1..479
                     /locus_tag="VIY07_14925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006935011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383084.1"
                     /translation="LRWRGIEATLALAQSRNSKVVVIGGGKDGLPIILGNVGNAENVA
                     GAKAAVPEDELTSNEKMSPVTPGGSALVRSGGSLGSSLAPTEKSSATARSSTPPDVTQ
                     TNTPPEKGATAPAGSNERSGSILPDLSDLKSLVPKVPDWLRSGTSGAGPQSTPPKQ"
     gene            590..1132
                     /locus_tag="VIY07_14930"
     CDS             590..1132
                     /locus_tag="VIY07_14930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383085.1"
                     /translation="MTDTTQSRQPRSRLSRILASSPGPFLLIVAILVGAVSYIIGLNI
                     AYLDIAAARQVIQSLRSDSQKLKTQLAEHTAKEVELQSKLATTQAALEAIIPSENTYM
                     VKPNQSIIVADGRLTIGLIGPPTNESININVNGKHQAAATGDVINIALEPPTTCQVRV
                     QSFDMFKAILAASCAGAKPQ"
     gene            1281..1928
                     /locus_tag="VIY07_14935"
     CDS             1281..1928
                     /locus_tag="VIY07_14935"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEY6383086.1"
                     /translation="MRQVITVATMKGGSGKSTLASCLAVHWHLTGRLPTVIDADPQRS
                     IARLAKRERALGGVPVVEDATADAWKTAQNLAASGRPIIIDTPGFRSQATLACIAAAD
                     FLLVPVKASPLDIDRMLDTLNSLIDGAGGQRPTFRCVLTQTTRDSVIAKHIRTELVEA
                     GYPVLNSEMTNRVAYPEAALWGATPSLISWNGHAAREIAAIANEVDGLVGVKRAA"
     gene            1931..2524
                     /locus_tag="VIY07_14940"
     CDS             1931..2524
                     /locus_tag="VIY07_14940"
                     /inference="COORDINATES: protein motif:HMM:NF016983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjF family protein"
                     /protein_id="HEY6383087.1"
                     /translation="MKKQLPKAIQPDIAHRIGSHADLISEPVPEPKRRSRPARPGTAA
                     AMGPVDNAPIDERRAYARKLVERFSLWAGAAGLLPIPVADLAAVAGLQIQMLRRLSQV
                     YDVPFSRHRGKALLAGFAGTMIPASTGVGMASLIKSVPIAGSAIGVMTTPALAVAATY
                     VIGLAFIEHFASGGTLLDFDPPDYQEFIKRGMELRKT"
     gene            complement(2545..4434)
                     /locus_tag="VIY07_14945"
     CDS             complement(2545..4434)
                     /locus_tag="VIY07_14945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY6383088.1"
                     /translation="MNRRSLLKSAALVVLASRQASLPDWNTSAKAQGAAPVWRHGLTK
                     FGELKYPAGFKQFDYVNPNAPKGASASQIALGTFDNFNTVVTGVKGTLAQGIDLLYDT
                     LLVPALDEVSSTYGLLAEAVSFPDDFSSATFRLRAQAKWQDGNPVTPEDVIFSFNAFK
                     KISPQAGASYRHVVKAEKTGDREVTFAFDTTGNRELPQVVGQLTVLPKHWWEGTDKDG
                     KKRNIEDTTLEMPLGSGPYRIKEFSAAHNIIYERVKNYWGRDINVNIGRDNFDELRFE
                     YFRDATVAIETFKGDLVDWRMENSAKNWATAYDFPAVSEKRVILEEFPINNVGLMQAF
                     AINLRRNKFKDPRVRLALNYAFDFEEMNKKIFFGQYKRTASYFEGTELASTGLPTGRE
                     LQLLESMRDKIPPEVFTKPYSNPVNGDQNAVRNNLREALRLLREAGYEVRNQQVVNAK
                     TGEPLEIEFLANAPLFERVFLFYKPSLERLGVTVSVRTVDQAHYENRLRSWDFDVITF
                     AWGQSLLPGNEQRGYWGSQAADQPGSNNILGIKNPAVDEMITHIIMAKTRDDLVAAAK
                     ALDRILLWNQYVVPQWGYAKLRTARWNRFGRPDLLPKYGMSAFPTVWWWDADRAAKTG
                     GKRTQ"
     gene            complement(4686..4919)
                     /locus_tag="VIY07_14950"
     CDS             complement(4686..4919)
                     /locus_tag="VIY07_14950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383089.1"
                     /translation="MAHGAGKGRFYQITLTAGAAGERKDYAMKTTMGLEKFEEELLAF
                     EVSDEALEIAAGASKEKANFTLGACSGLSVCPG"
BASE COUNT         1040 a         1501 c         1474 g         1024 t
ORIGIN      
        1 acttgcgttg gcgcggcatc gaggcaaccc tggcactggc ccagtcccgc aattcaaagg
       61 tggtggtcat cggcggcggc aaggatggcc tgcccattat tctcggcaat gtcggcaatg
      121 ccgagaatgt cgcgggagcc aaggccgccg tcccggagga tgaactaaca tcgaacgaga
      181 agatgtctcc cgttactccg ggcggcagcg cgctggtcag gtcgggtgga tcactcggca
      241 gttcgttggc accgacggag aagagcagcg ctaccgcgcg ctcatcgacg ccacccgacg
      301 tgacacagac gaacacgccg ccggaaaaag gtgcgactgc gcccgccggt tcaaatgagc
      361 gttccggctc gatcctgccc gatctgtcgg atcttaaatc tctcgttccg aaagtgcccg
      421 actggctgcg gtccggcaca tcgggggcag gtcctcagtc aacgccgccg aaacagtagc
      481 accatgcggc gcagaacgga ttaggcgaga tttttcgaat tgcgttcccg agcctaaatc
      541 ggcaatcatg aactgagata aagcgcccag attttgtgag gaatcgctgg tgaccgacac
      601 gacgcaatcg cggcagcccc gatcccggct ttcccggata ctggcgtcca gtcccgggcc
      661 ctttctgttg atcgtcgcga tattggtcgg cgccgtttcg tacatcattg ggctgaatat
      721 cgcctatctc gacattgctg cggccaggca ggttatccag tcgctccgca gcgacagcca
      781 gaagctcaag acccagctcg cagaacacac tgcgaaagag gtcgagctgc agtccaagct
      841 ggcaaccacc caggctgccc tcgaagcgat cattccgtcc gaaaacacct acatggtgaa
      901 gcccaatcaa tcgatcatcg ttgccgacgg acggttgacc atagggctga tcggtccgcc
      961 aacgaatgaa agcatcaaca tcaatgtcaa cggaaagcat caggcggctg ccacgggcga
     1021 tgtcataaat attgcgctcg aacccccgac aacctgccag gtgcgagtgc agtcgttcga
     1081 catgttcaag gccattcttg ccgcgtcatg tgcgggcgcg aagccccaat aggcccgccc
     1141 aaataccacc cgcggtccac tgaaagccgc agataactcg ggccgattgc gtgctcatca
     1201 gaagaatgaa ggccgagaat ccgctagcat tcgctgcaag tgattcgccg cacgcagatc
     1261 agcggaaagg caggtcggcc atgagacagg tcatcaccgt tgcaacgatg aaaggtggta
     1321 gtggcaagag tacgcttgcg agttgcctgg cggttcattg gcacctgacc ggtcggctcc
     1381 cgaccgtcat cgatgccgat ccgcaacgtt cgatagcccg ccttgcaaag cgcgagcgcg
     1441 cgctcggcgg cgttccggtg gtggaagatg cgacagccga tgcatggaag accgcgcaaa
     1501 atctcgccgc tagcggccgt cccatcatta tcgacacgcc cggattccgt tctcaggcga
     1561 cgcttgcgtg cattgccgcg gccgactttc tcctcgttcc ggttaaggcc tcgccgctgg
     1621 acattgaccg tatgttggat acccttaact cgctgatcga cggtgccggc ggccagcggc
     1681 cgacttttcg ctgcgttctg acccaaacga cgcgggattc ggtcatcgcc aagcatattc
     1741 ggacggaatt ggtcgaggcg gggtatcctg tcctcaacag cgagatgacc aaccgcgtcg
     1801 cctatccgga ggcagctctc tggggagcaa cgccgagcct catcagctgg aatggccacg
     1861 cggcgcgcga gattgcagcg attgccaacg aggtcgacgg gttagtagga gtaaagcgag
     1921 cggcgtagcg atgaagaagc aactacccaa ggcgatccag cctgacatag cgcaccggat
     1981 cggctcccat gccgatctga tctcggagcc tgtgccggaa ccgaagcggc gttcgaggcc
     2041 agcaaggcct ggtaccgctg cggcaatggg gccagttgat aatgcgccga ttgacgaacg
     2101 ccgggcctat gcacgcaagc tggtcgagcg cttctccctg tgggcggggg cggccgggct
     2161 tcttccgatc ccggtcgccg atctcgccgc cgtagccggg ctgcaaattc agatgctgcg
     2221 gcggctgtcg caggtctacg acgttccgtt ctccaggcac cgcgggaagg cgctcctcgc
     2281 gggtttcgcg ggaacgatga ttccggccag caccggggtc ggaatggcca gcctgatcaa
     2341 gagcgtgccg atagccggca gcgccattgg cgtgatgacc accccggccc tggcggttgc
     2401 ggccacctac gtgatcggcc tggctttcat cgagcacttt gcctcgggcg gaacgctgct
     2461 cgatttcgac ccgccggact atcaagaatt catcaagcgc ggcatggaac tgcgcaagac
     2521 ctgaacgctg cgcgcgccgc ggtgctattg ggtccgcttg ccacccgtct tggccgctct
     2581 atccgcgtcc caccaccaga cagtcgggaa agctgacatt ccgtatttcg gcagcagatc
     2641 agggcgcccg aaccgattcc agcgcgcggt ccgcaacttg gcgtatcccc actgcgggac
     2701 cacgtattgg ttccacagca atatgcgatc aagcgccttc gcagcggcta cgagatcgtc
     2761 acgggtcttg gccatgatga tatgcgtaat catctcgtcg accgccggat tcttgatgcc
     2821 gaggatgttg ttggatcccg gctggtccgc cgcttgcgaa ccccaataac cgcgctgctc
     2881 gttccccggc aaaagagatt gaccccaggc aaaggtaata acgtcgaagt cccagctgcg
     2941 cagccggttc tcatagtgcg cctgatcgac cgtgcgcacc gacaccgtaa cgccaaggcg
     3001 ttccagggac ggcttataga acaaaaacac acgttcgaag agcggcgcgt tggcaagaaa
     3061 ttcaatttcc aaaggctcac cggtcttcgc gttgacgact tgttggttac gaacctcata
     3121 gccggcctct ctcagcagcc gcaacgcttc gcgcaaattg ttgcggacgg cgttctgatc
     3181 gccattgacc ggattggaat aaggcttggt gaaaacttcg ggcggaattt tgtcacgcat
     3241 tgattcaagc agctgaagtt cgcgcccggt tggcagtccc gtcgaggcaa gctcggtgcc
     3301 ttcgaagtag ctggcggttc gcttgtattg cccgaagaat atcttcttgt tcatttcttc
     3361 gaagtcgaac gcataattga gggcgagccg gacccgcgga tccttgaact tgtttcgccg
     3421 cagattgatg gcaaaagcct gcatcagccc gacgttattg atgggaaatt cctcgaggat
     3481 cactcgtttc tcactcaccg ccggaaaatc ataggcggtc gcccaattct tggcgctgtt
     3541 ctccatgcgc cagtccacca gatctccctt gaatgtctcg atggccaccg ttgcgtcgcg
     3601 gaaatattcg aatctcaatt cgtcgaaatt gtcacgcccg atattgacgt tgatgtctct
     3661 gccccaatag tttttgacgc gctcgtagat gatattatgg gccgccgaga attctttaat
     3721 ccggtacggg ccactgccaa gaggcatctc aagcgtggtg tcctcgatgt tgcgcttctt
     3781 cccgtccttg tccgtgcctt cccaccagtg cttcggcagg acggtcagtt gcccgacgac
     3841 ctggggcagt tcgcgatttc ccgtcgtatc gaatgcaaag gtgacttcac gatcgcccgt
     3901 tttctccgcc ttgacgacat gccggtagct cgcgcccgcc tgcggactta tttttttgaa
     3961 cgcattgaat gagaagatga cgtcctcggg cgtcacggga ttgccgtctt gccactttgc
     4021 ttgggcacgc agccggaacg tggcggagga gaagtcgtcc gggaagctca cggcttccgc
     4081 aagcaaaccg tatgtgctcg atacttcatc cagcgcgggt accagaaggg tgtcgtagag
     4141 caggtcgatg ccctgcgcga gtgtgccttt cactcccgtg accaccgtat tgaaattatc
     4201 gaaggtacca agtgcgattt gggaggccga ggcgcctttc ggagcgtttg gattaacgta
     4261 gtcgaattgt ttgaatccgg ccggatattt cagttcgccg aacttcgtga gtccgtgccg
     4321 ccaaaccgga gcagcgcctt gcgctttggc ggaggtattc cagtcgggca aggaagcttg
     4381 tctgcttgca agaacgacca gcgcggcgga cttgagcaac gaacggcggt tcatgaggta
     4441 ctccagcgga agtcgccacc cggcacggag tgacttatgc caatgctatg tggttttcgg
     4501 ttggggcgac agtgcagagg cattcgtcgc gacaaattga acgagccctg agagagcggg
     4561 ggctcgcggc tgatcgagag attacagacg caacgaggcg ccgaaaaaac ttccggcgcc
     4621 tcgccaaagt tcgtcggtcc agcagatcag aaatgtatgt aggagcctcg gaccggtccg
     4681 aaagctcagc ccgggcagac ggacaagccg ctgcaggcgc caagggtgaa gtttgccttc
     4741 tccttcgacg cgccggccgc gatttccagc gcttcgtcag agacttcgaa ggcgaggagc
     4801 tcttcttcaa acttttcaag tcccatcgtg gtcttcatgg cataatcctt tcgttcgcca
     4861 gcggcgccgg cagtcagagt tatctggtaa aaacgcccct tcccagcgcc atgcgccatg
     4921 atccgatgca ctccctgcaa agtcaattgg aataagccca tgtccgcagg cacttatggg
     4981 acgccgctgc ggattctgtg ggaaatccag tcgcgtctta accaaatcag atcataaag
//
LOCUS       DATDHO010000773         1722 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_37073, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000773 DATDHO010000000
VERSION     DATDHO010000773.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37073"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..447)
                     /locus_tag="VIY07_14955"
     CDS             complement(<1..447)
                     /locus_tag="VIY07_14955"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6383090.1"
                     /translation="MKVLMAVLAVALALGPGAVMAQEKFPNRPVKVIVPYAPGGATDI
                     TARVLGDEFQKVTGQGFVVINKPGAFGMLAIDEMAKSAPDGYTLMLGNVSTNTITPII
                     YANKMSVDYGKSVVAVTNLVDVPAFLLVSTANDFPVKSVPELIAYAK"
     gene            complement(506..907)
                     /locus_tag="VIY07_14960"
     CDS             complement(506..907)
                     /locus_tag="VIY07_14960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6383091.1"
                     /translation="MSNQPVARTPGAKRAAPGEYVFDLGTMHKIMGGPAYSTAHGPCV
                     EGDRMIVGLMRMKAGTGAEPHSHPNEQWIYVLEGTFRANIDGKEIDVNPGSVVYIPAN
                     TVHAGKATADGDVVFFTVKDASHSLHGIKAT"
     gene            1062..1568
                     /locus_tag="VIY07_14965"
     CDS             1062..1568
                     /locus_tag="VIY07_14965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEY6383092.1"
                     /translation="MTRIAATLLVLFMVSGCADTQVPKGEPSFYRNLAQPGAELDAAS
                     AASMISGYRANNGLPVVALDPELMQVAQAQAEVMAKRDKLDHGAGKPFVQRLKASGYD
                     AKRAAENVSAGYHTFAEAFSGWRDSNPHRANMLLAGATRMGIAAVYTPASKYKVYWSL
                     ILAEPDEK"
BASE COUNT          340 a          516 c          507 g          359 t
ORIGIN      
        1 ctttgcgtag gcaatgagct cgggaacaga cttcaccgga aaatcattcg ccgtgctgac
       61 gaggaggaaa gccgggacgt cgaccagatt ggtcacggcc acaacgctct tgccgtagtc
      121 gacactcatc ttgttggcat agatgatcgg cgtgattgta ttcgtcgata cattgcccag
      181 catcagcgtg tagccgtctg gcgctgactt tgccatttcg tcaattgcca gcatgccgaa
      241 cgcgcccggc ttgttgatca cgacgaagcc ttgaccggta accttctgaa attcgtcacc
      301 gaggacgcgc gcagtaatgt cggtagcgcc gccgggcgca taaggcacga tcacctttac
      361 gggccggttt ggaaatttct cttgcgccat tactgcgccc gggccaagag cgagggcgac
      421 ggcgagcact gccatcaaga ctttcatgcg ttcctccaga tcgatcgagc ggcggaaatt
      481 ctttgcgttt ccgttgcgcg ccggttcagg tggctttgat gccgtgcaag ctgtgcgagg
      541 cgtctttaac cgtgaaaaat acgacatcgc cgtccgcggt cgccttgccg gcatgcaccg
      601 tgttggccgg aatgtagacg accgagcctg ggtttacatc gatttccttg ccatcgatat
      661 tagcgcggaa ggttccctca agcacataga tccattgctc gttcgggtgc gagtgaggct
      721 cggcgccggt gccggctttc atgcgcatca ggccgacaat cattcggtcc ccttcaacgc
      781 aggggccatg ggcggtcgaa taggcaggcc cacccatgat cttgtgcatc gttcccagat
      841 cgaaaacata ttctcctggt gcggcgcgct tggcgcccgg cgtgcgtgcg accggctgat
      901 ttgacatgac attctcccgg ctactgactt ttaagatgtt agttgacgac gcgcagacgc
      961 gccagtagag ccggggctca ttaatccgta cgcgcagtat tacggttctg ccgcggtcgt
     1021 ccgcagccct tgccggtcca cgattcggag aaaactcccc gatgacgcga attgccgcga
     1081 cactgctggt cttgttcatg gtcagcggtt gtgccgacac ccaggtgccg aagggggagc
     1141 caagcttcta ccgcaacctg gcgcagccgg gcgcggagct cgacgccgca agtgcagcct
     1201 cgatgatctc cggctatcgc gccaacaatg gattgcctgt cgttgcgctc gatccggaat
     1261 tgatgcaggt cgcgcaggcg caggcagaag tgatggccaa gcgcgacaag ctggatcacg
     1321 gggccggcaa accattcgtg caaagactga aggcatcggg ctacgacgcc aagcgagcag
     1381 ccgaaaacgt gagtgccgga tatcatacct tcgccgaggc cttttccggc tggcgcgact
     1441 cgaacccgca tcgggccaac atgctgctgg ctggcgcgac ccgcatgggc atcgccgcgg
     1501 tttacacgcc agcctcgaaa tataaagtct attggtcgct gatcctggct gagcctgacg
     1561 aaaaataaag aatagtccta cgggctcacc agtggcccca cttgagcggc cccatttcgg
     1621 acgcgccgct acgtcacgcg cttgcacccc tatgatgagc aacaggtcgg gctggaccac
     1681 atgctgaccg ctgactagcc ttgcgccatg ccggttcttc ct
//
LOCUS       DATDHO010000774         1558 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_385310, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000774 DATDHO010000000
VERSION     DATDHO010000774.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_385310"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..319
                     /locus_tag="VIY07_14970"
     CDS             <1..319
                     /locus_tag="VIY07_14970"
                     /inference="COORDINATES: protein motif:HMM:NF019253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1585 domain-containing protein"
                     /protein_id="HEY6383093.1"
                     /translation="PAEPGRGKNGHPFAFHYGLPVDCAGILPDGRAFTDVRALKRLLA
                     DDEATLARNFAKQLTIYATGAPIRFSDRTVIEQILQQAKPTRFGIRSLIHGVVQSSLF
                     REK"
     gene            complement(411..>1558)
                     /locus_tag="VIY07_14975"
     CDS             complement(411..>1558)
                     /locus_tag="VIY07_14975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383094.1"
                     /translation="MLGAYGDWASAHLGEGPARLSFRQSRYRVQDLNRWRSEARRRLN
                     DCLLMPASSGAPKAEVQHQFEFDGLHVEHLNWQLPYGPVTEAIFLKPSGARGQGKLPA
                     VIGLHDHGGNKYFGHRKISRVSEAIHPLMKRHQEQYYGGVAWANELARRGYAVLVHDA
                     FLFGSRCIRLADVPAVLKRNVHEVTEETEPLIAAYNTWAAQQETVVAKSLFCAGLTWP
                     GVFLWEDQRALDYLCARPDVDPKRVGCAGLSGGGLRTVFLAGSDDRIAAAICVGMMTT
                     WRDYLLNKSHTHTWMCYVPGLPRDLDYPEILGLRVPLPTLVLNDIEDQLFTLPEMQRA
                     DRILRDVFRKAGSADRYHCSFYPGPHKFDLAMQKEAFEWFDRWLLRG"
BASE COUNT          321 a          492 c          429 g          316 t
ORIGIN      
        1 acctgccgaa ccaggccgcg gcaaaaacgg ccaccccttc gcgttccatt atggtttgcc
       61 ggtggactgc gccggtatcc ttcccgatgg ccgagctttc actgatgttc gcgcgctcaa
      121 gcgtctgtta gccgacgacg aggcaacgct ggcgcgcaat ttcgccaagc aactcacgat
      181 ctatgccacg ggcgcgccca tccgcttcag cgaccgcacc gtcatcgaac agatcttgca
      241 acaggctaaa ccaacccgat tcggcatccg cagcctgatt cacggcgtag tccaaagctc
      301 tctctttcga gagaaatgat taattgttca tttgagaaaa aggaccagga gagtttagca
      361 accatctatt tgccctagtt agtcaagtaa ttatttcagt aattgccggt ttacccccgg
      421 agaagccacc gatcgaacca ttcgaacgct tctttctgca tcgccaggtc gaatttgtgc
      481 gggccgggat aaaacgagca gtggtagcgg tcggcagacc cggctttgcg gaagacgtct
      541 cgcaagatcc gatcggcgcg ctgcatttcg ggcagtgtaa acagttgatc ttcgatgtcg
      601 ttcagcacca gcgtcggcag aggaacgcgc agacccagga tttccggata atccagatcg
      661 cgcggcaatc cagggacgta acacatccag gtgtgcgtgt ggcttttgtt gagcaggtaa
      721 tcgcgccagg ttgtcatcat ccccacgcag attgccgcgg cgatgcggtc gtcgctcccg
      781 gccagaaaga ctgtccgcaa tccgccgcct gataagcctg cgcagccgac tcgttttgga
      841 tcgacatccg gccgcgcgca cagataatcc agcgcccgct ggtcttccca cagaaacact
      901 ccgggccagg tcagtcccgc gcaaaaaagg cttttcgcca caactgtttc ctgctgagca
      961 gcccaggtgt tataggccgc gatcaacggt tccgtttcct cagtcacttc gtggacgttg
     1021 cgcttgagca cggcgggtac gtcggccaga cgaatgcagc ggctgccgaa cagaaaggca
     1081 tcgtgaacca gcaccgcata accacgccgc gcgagttcat tcgcccaggc gacgcctccg
     1141 taatattgct cctggtggcg cttcatcagc gggtgaatcg cctcgctcac ccgcgagatt
     1201 ttgcgatgcc cgaaatattt gttgccgccg tggtcgtgca gccctatcac agccggcaac
     1261 ttcccctggc ctcgcgcgcc gctcggtttc agaaagatcg cctcggtcac ggggccataa
     1321 ggcaattgcc agttcaagtg ttcgacgtgc aggccatcga attcaaattg atgttgcacc
     1381 tcggcctttg gcgcgccgct gctcgcgggc atcaacaggc aatcgttcag gcgccgccgc
     1441 gcctccgagc gccagcggtt gaggtcttgt acgcgatagc gcgattgccg aaacgacaag
     1501 cgcgccggcc cctcgcccag atgcgcgcta gcccaatcgc cgtacgcgcc cagcatgg
//
LOCUS       DATDHO010000775         2253 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_83444, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000775 DATDHO010000000
VERSION     DATDHO010000775.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2253)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2253)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2253
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_83444"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(84..392)
                     /locus_tag="VIY07_14980"
     CDS             complement(84..392)
                     /locus_tag="VIY07_14980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383095.1"
                     /translation="MLFLLVVAVAWGGWELFLTLTASGRIDPALQPALRARAPVAIAI
                     RLGFAPENFHIRLLQSYGVVSGVQGTTVLVNRVSPDDLRRIARYYWVRQITMQSERVS
                     "
     gene            complement(437..1225)
                     /locus_tag="VIY07_14985"
     CDS             complement(437..1225)
                     /locus_tag="VIY07_14985"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383096.1"
                     /translation="MMRGWRGGVRALGRGVLPFALILIAWALVTRAGVVPAMFLPPPG
                     DVARTAWEMLKDGSLWINIGASVGRVLVSLVISVPLAIGLGIFVGLRRKLSPVVEPIA
                     GFFNALSGIAWLPLAVTWFGLGWLSVTFIMFNTIFFLVFYNTLVGVRTVPRIFEHAVR
                     TLGGSRRHIIFQVLIPGAMPNIVTGIRMSIGFGWRALIAAEMIATSTGLGFLIYNASN
                     FHQTDTILVGIVTIGVLWLLTDRLVLQPIERWTVERWGLVSSDR"
     gene            complement(1222..1992)
                     /locus_tag="VIY07_14990"
     CDS             complement(1222..1992)
                     /locus_tag="VIY07_14990"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383097.1"
                     /translation="MERYWELASTWFVILAASIAVWSLAAATLPVPDYFLPPPSAVLS
                     AFAELMTKGMLPTFIGESLRRILIAALLGLFVGVPLGLLLGISRGTADFAYPVLNFFQ
                     SVSGIAWLPLMLIWFGFGERTILVAVNYTVFFPVIFNALLGIRSVPQIYVNALRTLGA
                     SRWRIVRDVLVPGALPNIAMGIRLGLAYGWRALIAAEMLVGANGLGFMIFNAQAFHLT
                     ARIMLGMGIIGALWVVLDYFFLRPLEEATIARWGMVQR"
     gene            complement(1992..>2253)
                     /locus_tag="VIY07_14995"
     CDS             complement(1992..>2253)
                     /locus_tag="VIY07_14995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383098.1"
                     /translation="LQEELNVIAQRTRKTILFVTHNVEEAVFLGDRCCVLSGRPGRVK
                     ALVPVRIPRERRKWNLLMSDATFDAAKEKVFGLVREEVGKEV"
BASE COUNT          536 a          703 c          665 g          349 t
ORIGIN      
        1 gcattcaaac gctggaccgg cacgacgcct ctggattacc agcgcaagct tctcggccaa
       61 cactagtcat ttcgcaatga agctcagctt actctctcag attgcatggt gatttgtcgt
      121 acccagtaat aacgagcgat ccggcgcaaa tcgtcagggg agacacgatt gaccaacacg
      181 gttgttccct gcactccgct caccacgccg tagctttgaa gcaaccggat gtggaagttc
      241 tccggcgcaa agccgagcct gatcgcaata gccaccggcg cccgagcgcg caacgcgggc
      301 tggagcgccg ggtcgatgcg tccggacgca gtcaaagtaa gaaacagttc ccagccaccc
      361 caagcaactg ccacgacaag gaggaagagc accgatcggt gtcttaaaag tacgagtcgg
      421 gacatcgccg aacctttcat cggtccgaag agaccaggcc ccagcgctcc accgtccacc
      481 gctcaatcgg ctggagcacc agccggtcgg taagtagcca caagacgccg atcgtgacaa
      541 ttcccacgag aatcgtgtcg gtctggtgaa agttgctcgc attgtagatg aggaatccaa
      601 gaccggtgct ggtggcgatc atctccgcgg cgatcaaggc gcgccagccg aagccgatgc
      661 tcatccgaat cccggtcacg atattgggca tcgcgccagg aatcagtact tgaaagatga
      721 tgtggcgccg cgagccgccg agcgtgcgca cggcatgctc gaaaatccgt ggtacggttc
      781 ggaccccgac gagcgtgttg tagaagacca aaaagaagat cgtgttgaac atgatgaaag
      841 tcacgctcaa ccagcctagc ccgaaccagg ttaccgcaag cgggagccag gcgattcccg
      901 acaaagcgtt aaagaagccc gcgatcggct cgacaacagg tgagagcttg cggcgaagcc
      961 cgacaaagat cccgagccct attgcgagcg gcacgctgat cacgagcgat acgagcacac
     1021 ggcccacgct cgctccgatg ttgatccata gcgacccgtc ctttagcatc tcccaggccg
     1081 ttctggcgac atcgccaggc ggaggtagga acatcgccgg caccactccg gctcgggtca
     1141 cgagtgccca ggcaattagg atgagggcaa agggcaacac tccccgcccg agagcccgca
     1201 cgcctccgcg ccatccacgc atcatcgctg caccatcccc cagcgggcaa tcgtcgcctc
     1261 ctccaacggg cggagaaaaa aatagtccaa gaccacccac agggcgccga tgattcccat
     1321 tccgagcata atgcgtgcgg tgagatgaaa ggcctgggcg ttgaagatca tgaagcccaa
     1381 gccgttggcg cccaccagca tctcggcggc gatcaacgcg cgccatccgt aggcgagccc
     1441 gagccgaata cccatggcga tgttggggag cgctcccgga accagcacgt cgcggacgat
     1501 gcgccagcgc gaggcaccaa gggtgcgaag ggcattcacg tagatctgcg gcacactcct
     1561 gatacccagg agtgcgttga agatcaccgg gaagaaaacg gtgtaattga ctgcgaccag
     1621 gatcgtccgc tcgccgaacc caaaccagat cagcatcagc ggcaaccagg cgatgcctga
     1681 taccgattgg aagaagttca gcacgggata agcgaagtcg gcggtcccgc ggctgatgcc
     1741 gagaagcaga ccgagcggga caccgacgaa gagcccgagc agcgcggcga tgagaatgcg
     1801 tcgcaggctc tcgccgataa aagtcgggag catgcccttg gtcatgagtt cggcgaaggc
     1861 cgacagcacg gccgaaggcg gcggcaggaa gtagtctgga accggaagag ttgcggcagc
     1921 aagactccac acggcgatgc tcgccgccag gatgacgaac caggttgatg cgagctccca
     1981 atagcgttcc actagacctc cttgccaacc tcctcgcgca ccaagccgaa caccttctcc
     2041 ttggctgcgt caaacgtcgc gtccgacatc aagagattcc atttgcgccg ctcgcgaggg
     2101 atgcgaaccg gcaccagcgc cttgacccgg cccgggcgtc ccgagagcac acagcagcgg
     2161 tcgccgagga ataccgcctc ctcgacgtta tgggtgacaa agaggatggt cttgcgcgtc
     2221 ctctgagcga tgacgttgag ctcttcctga agg
//
LOCUS       DATDHO010000776         2477 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_286992, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000776 DATDHO010000000
VERSION     DATDHO010000776.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2477)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2477)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2477
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_286992"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..682
                     /locus_tag="VIY07_15000"
     CDS             <1..682
                     /locus_tag="VIY07_15000"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEY6383099.1"
                     /translation="QGLDGNIDVIVPRGGKSLVARVQTEARVPVFAHLEGVCHVFIHR
                     AASPDMAKKIVLNAKMRRTGVCGAAETLLIDRASMATHLKPLIAMLIEAGCEIRGDAA
                     TVAADKRAKPATEEDWATEYLDAIIAVRVVDDLSGAIAHIERYGSHHTDAIITDDREA
                     AERFLREVDSAIVLHNASTQFADGGEFGFGAEIGIATGRLHARGPVGVDQLTTFKYRI
                     HGSGQTRP"
     gene            679..1455
                     /locus_tag="VIY07_15005"
     CDS             679..1455
                     /locus_tag="VIY07_15005"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: protein motif:HMM:NF000843.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEY6383100.1"
                     /translation="MTSKKTAVPERLLPLHAPGMRIGLFGGTFDPPHQAHVGATLLAL
                     KRLKLDRVWWLVTPGNPLKNTSGLAPLPQRIAAARAIIHHPRIDVTGLESVIKTRYTY
                     DTITWLLARCPRVRFVWIMGADNLRSFHRWQKWRKITELVPIVVIDRLGPSLYAAASP
                     AGNVLARVRIPEHAAASLPNHKPPAWTFLHGLKSPLSSTALRALRKRSGSPDRPRRKA
                     KNISKSSRAKTSDKKRGTKPGESKLGARTGKSRGRKKRTR"
     gene            1521..1928
                     /gene="rsfS"
                     /locus_tag="VIY07_15010"
     CDS             1521..1928
                     /gene="rsfS"
                     /locus_tag="VIY07_15010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEY6383101.1"
                     /translation="MYTPALSRASRRTPETVSRHPTAKETLHTVLARLEDMKAEDSVV
                     IDLTGKSSIGDYMVVTSGRSQRHVSAVADHLIKDIESAGSPRVRVEGMRQGDWVLIDA
                     GDVIIHVFRPEVRAFYNLEKMWSGASKDARRQA"
     gene            1945..2427
                     /gene="rlmH"
                     /locus_tag="VIY07_15015"
     CDS             1945..2427
                     /gene="rlmH"
                     /locus_tag="VIY07_15015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEY6383102.1"
                     /translation="MRIIVAAIGRLKQGPETELSERYRKRAAQTGRQLGLRDIEIIEI
                     RESRAADAGKRMLEESIALANVIPENAAVVLLDNLGENLDSPALATQLAKWRADTRPA
                     TVFVIGGADGVAPSLREKAELRISFGSATWPHQLVRVMLLEQLYRATTILAGHPYHRA
                     "
BASE COUNT          522 a          759 c          752 g          444 t
ORIGIN      
        1 gcagggtctg gacggaaata tcgatgtcat cgtgccccgc ggcggaaaga gcctggtggc
       61 tcgcgtccaa accgaagcac gcgtgcccgt attcgcgcac cttgagggcg tttgtcacgt
      121 tttcatccat cgcgcggcct cccccgatat ggccaaaaaa attgtcctga acgccaaaat
      181 gcgacgcacg ggcgtttgcg gcgcggcgga aacactgctg atcgatcgcg ccagcatggc
      241 aacccacctg aagcccctca ttgccatgtt gattgaggcc ggctgcgaga tccgcggcga
      301 tgccgcgacg gtggccgcag acaagcgagc gaagcccgcc accgaggagg attgggccac
      361 cgagtatctc gatgcgatca ttgctgtgag ggtggtggat gatctctcgg gcgcaattgc
      421 tcacatcgag cgctacggat cgcatcacac cgacgcaatc ataaccgacg accgcgaggc
      481 cgctgagagg ttcctgcgcg aagtggattc ggcaattgtg ttgcacaatg cctcgaccca
      541 attcgccgat gggggcgaat tcggattcgg tgccgagatc ggcatcgcca ccggacgact
      601 gcatgcgcgc ggccctgtcg gggtcgacca gctcaccacc ttcaaatacc gaatccacgg
      661 gagcggtcag acgcggccgt gacatccaaa aaaaccgctg ttccggagcg cctgctgccc
      721 ctgcacgcgc ccggcatgag aattggcctt tttgggggga cattcgatcc gccgcaccag
      781 gcgcatgtgg gagcaaccct gctcgcactg aagcggctca agctcgatcg cgtgtggtgg
      841 cttgtaactc ccggcaatcc gctgaagaat accagcgggc ttgcgccgct gccgcagcga
      901 atcgccgccg cgcgggcgat cattcatcat ccgcgcatcg acgtgacggg gctcgaatct
      961 gtcattaaga cgagatatac ctacgatacg ataacttggt tgctggcccg ctgccctcga
     1021 gtgcgattcg tctggatcat gggcgcggac aacttgagga gttttcatcg ctggcagaaa
     1081 tggcgcaaga taaccgagtt ggtgcctatc gtcgttatcg accgcttggg ccccagtctt
     1141 tacgctgccg ccagtccagc cggaaatgta cttgcccgcg tgcgcatccc cgaacacgcg
     1201 gccgcgtccc tccccaatca caaaccgccg gcgtggacgt tccttcacgg tctcaaatca
     1261 cctttatcct cgaccgcgct ccgagccctg cgcaaacgga gcggaagtcc ggaccgccct
     1321 cgccggaagg caaaaaacat cagcaaatct tccagggcga agacgagcga taaaaaacgt
     1381 ggaacaaagc caggcgaatc gaaattggga gccagaaccg gcaaaagccg gggtagaaag
     1441 aagcggacga ggtaattatg tttcttgagg cccccggttc acaccggggt gagtgcaacg
     1501 catagaaagg atcacaggcc ctgtatacac ctgcactctc tcgggcatct cgtcgtacgc
     1561 ccgaaaccgt ctcccggcac ccgactgcca aggagacgct ccacaccgtc ctcgcgcggc
     1621 ttgaagatat gaaagcggag gacagcgtcg tcatcgatct caccggaaaa tcctctatcg
     1681 gcgattacat ggtcgtgacc agcggccggt cgcagcgcca tgtcagtgct gttgccgatc
     1741 acctcatcaa ggacatagaa agtgcgggca gtccgcgcgt tcgtgtcgaa ggcatgagac
     1801 agggcgactg ggtgctgatc gacgccggcg acgtgattat ccatgtcttc cggcctgaag
     1861 ttcgcgcctt ctacaatctg gagaagatgt ggtcgggggc gagcaaggac gcacgtcggc
     1921 aagcctgata ctctcgccgg cgcgatgcgt atcattgttg ccgcgatcgg ccggctgaaa
     1981 cagggcccgg agaccgagct gagtgagcgc taccgcaagc gggcggcgca aaccggtcgc
     2041 cagcttggat tgcgcgatat cgaaatcatt gaaatccggg agagtcgcgc ggcggacgcc
     2101 ggcaagcgga tgcttgagga gtcgatcgcg cttgccaacg tcattcccga gaacgcggca
     2161 gtggtactgc ttgacaacct gggcgaaaac ctcgacagcc ccgctctcgc aacccagctt
     2221 gccaagtggc gcgccgacac gcggccggca accgtctttg tgatcggcgg tgcggacggg
     2281 gtggcgccaa gcctgcggga aaaggcggaa ttaaggatct cgttcggatc ggcgacctgg
     2341 ccgcatcagc tggtcagggt gatgctgctg gagcagcttt atcgggcaac gacgatcctc
     2401 gccgggcatc cctatcaccg cgcatgaaat ttgtcgtccg cctgccttac accccgattt
     2461 ggtcgcaatc cgcatca
//
LOCUS       DATDHO010000777         6320 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_287056, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000777 DATDHO010000000
VERSION     DATDHO010000777.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6320
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_287056"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..611
                     /locus_tag="VIY07_15020"
     CDS             <1..611
                     /locus_tag="VIY07_15020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY6383103.1"
                     /translation="LQLFVSATNVRSGQLHVFRREEMSADMIVASACLPHLFRAVEID
                     GDHYWDGGYVGNPALYPLVGATQTENLLLVQINPVHRKQVPKTQNEILARINEITFNS
                     SLMSELRGLAFVGKLIDEGRLPRGTGTGQYRRINVHRVALTGAAQTLDAASRLHTDYD
                     FFEMLRTNGKRAARRFLDAHYDDIGVRSSVDFEAVAPEAASA"
     gene            623..1171
                     /locus_tag="VIY07_15025"
     CDS             623..1171
                     /locus_tag="VIY07_15025"
                     /EC_number="3.1.1.106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HEY6383104.1"
                     /translation="MTELTAEIGQTILEVIVADITALDVDAIVNAANRTLLGGGGVDG
                     AIHRAAGPELLEVCRTLGGCDTGSAKITRGYRLKARHVIHAVGPVWAGGGKNEEALLA
                     GCYRSALDLAASSRLTSIAYPAISTGVYRFPADLAARIAVGTVAAEIAARPRGMTRVI
                     FCCFAPESADHHKNVFAELGLV"
     gene            complement(1392..2189)
                     /locus_tag="VIY07_15030"
     CDS             complement(1392..2189)
                     /locus_tag="VIY07_15030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HEY6383105.1"
                     /translation="MSDDVHEVYAICYGTHARKRSENYIFGDPHDEMTSIAYYVWVIQ
                     GPHGTFVCDTGFDEVAAKERARKITHPVGDGIKALGLEPDTVDHVIATHMHWDHAGNY
                     DLFPNARYHIQDTEMAYATGRCMCHQMLRIPFSESDVLAMVRKVFAYRVEFHDGVDEL
                     APGITVHKIGGHSKGLQCVRVKTRRGYVVVASDSAHLYSHIDEGRVFPITYSVGDTLE
                     GYKTLQKLASSRHHIVPGHDPEVLKLYPAVKRGLENWIVRLDVEPKA"
     gene            complement(2186..3082)
                     /locus_tag="VIY07_15035"
     CDS             complement(2186..3082)
                     /locus_tag="VIY07_15035"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6383106.1"
                     /translation="MDIGFIGLGNMGQPMARRLIEAGHKLVVYDTRNDAVTPMIALGA
                     QLASSPADVADRVETVMASLPSLQISEKVAIGEGGVIHGKRIKRFIDLSTTGSRVAAK
                     IAGALAKKNIVQIDCPVSGGVGGASKGTLAVMVSGPKQEIEIVKDVLAVFGRVFVIGE
                     KPGMAQTMKLANNFLSATAMAATSEAVAMGVKAGLDAAVMIDVINAGSGRTTASDGKF
                     PQSVLPRTFDYGFATGLMLKDVRLCAEEAKALDVPDAVMRAVLHQWETTNSEFGADTD
                     FTLIVKMIERRAGVTVGSEKKA"
     gene            complement(3142..4263)
                     /locus_tag="VIY07_15040"
     CDS             complement(3142..4263)
                     /locus_tag="VIY07_15040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HEY6383107.1"
                     /translation="MTLPLSGLLVVSVEQAVAAPQCTCRLADAGARVIKVERPEGDFA
                     RDYDHVVHGESANFVWLNRGKQSVVLDLAKPDDKALLEAMLGKADVFVQNLKPGAIAK
                     LGFAMARLRKDYPRLICCSISGYGESGPYAQRKAYDLLIQAESGVSSVTGGPEAPARV
                     GVSIVDVAAGLNAYEAILEALVARTKTNKGTEISVSMFDAMAEWMTVPLLHGEGGLPF
                     KRIGLAHAAIAPYGVFKSRDGGDILIAIQNDREWRVLAEKVLGEPGLGKDPKFATNPK
                     RAENRADTDAKVAASFARLDVEALIDKLESAEIAFARVNDWELLSQHAHLRRITVGAP
                     SGPVSMPAPAPMRAGEERTYGPIPALGEHTELIRREFLK"
     gene            complement(4289..5458)
                     /locus_tag="VIY07_15045"
     CDS             complement(4289..5458)
                     /locus_tag="VIY07_15045"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6383108.1"
                     /translation="MKKRAAEDEYSDVRAGVRALCAKFPGEYWRALDRERAYPTEFVA
                     ALTKAGYLAALIPEEYGGSGLNLGAAAAILEEVHASGGNGAACHAQMYTMGTILRHGS
                     KAQKQRYLPLIASGELRLQAFGVTEPTSGTDTLSLRTMARREGNDHYVINGQKIWTSR
                     AEHSDLMLLLARTTPKEQTKKRTDGLSVFLVDMRLAQGANISINPIRTMMNHATTQIF
                     FDDLRVPAENLIGEEGKGFRYILSGMNAERILIAAECIGDAKWFIAKATQYAKDRELF
                     GRPIGQNQGVQFPIARAYAQMRAAELMVHEAARKYDAGEDIGAEANMAKLLAADASWA
                     AADMCVQTHGGFGFAEEYDIERKFRETRLYQVAPISTNLILSYLAEHVLGLPRSY"
     gene            complement(5795..>6320)
                     /locus_tag="VIY07_15050"
     CDS             complement(5795..>6320)
                     /locus_tag="VIY07_15050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEY6383109.1"
                     /translation="PMLCDAKYRQTQQDRGDDPERLVDLYADLINMAMSDIPADMTIT
                     MHMCRGNYKSTYMGAGGYEAVQEILFNKIKVNGFFMEYDTARAGGFEPLRMLPKDRTV
                     VLGLVTSKTGRLEPRGEIHRRIEEATKFVSLDQLCLSPQCGFASTEEGNVLGEEEQWA
                     KLRMIVELSKEIWG"
BASE COUNT         1175 a         1963 c         1870 g         1312 t
ORIGIN      
        1 atctgcaatt gttcgtctct gccaccaatg taaggagcgg acagctccat gtgttcaggc
       61 gcgaggaaat gagtgcggac atgatcgttg cctcggcctg cctgccgcat ctgtttcgcg
      121 ctgtcgagat cgacggagac cattattggg atggaggcta cgtaggcaat ccggcgctct
      181 atccgctggt tggtgccaca cagaccgaaa acctgctgct ggttcagatc aatccggttc
      241 accgcaagca ggtgccgaaa acgcagaacg agatcctggc gcgcatcaac gagatcactt
      301 tcaattcctc gctgatgtcg gaactgcgcg gccttgcttt tgtcggcaag ctgatcgacg
      361 agggcaggtt gccgcgcggc accggcacgg ggcaataccg ccgcatcaat gtgcatcgtg
      421 ttgcgctcac cggcgcagcg cagacacttg acgccgccag ccgactccac accgactacg
      481 atttcttcga gatgttgcgc acgaacggca agcgcgccgc tcggcgcttc cttgatgcgc
      541 attacgacga catcggcgtg cgctcgtccg tcgattttga ggcagtggca cccgaagccg
      601 cgagcgcgtg atataatcgc gcatgacgga attaaccgcc gagatcggtc agaccattct
      661 cgaggtcatt gttgccgaca tcaccgcgct tgatgtcgat gcgatcgtga acgcggcgaa
      721 ccgcaccctg ctcggcggtg gcggcgtcga cggcgctatc caccgggctg ccgggccgga
      781 actgctggaa gtatgccgca ccctgggcgg ctgcgacacc ggctctgcca agatcacgcg
      841 cgggtaccgg ttgaaagcca ggcacgttat ccacgcggtc ggacctgtct gggccggtgg
      901 cggcaagaac gaagaggccc tgctggcggg ctgttatcgt tccgccctcg atttggccgc
      961 gtccagccga ttgacatcga tcgcataccc cgcgatctcg accggcgtct atcgcttccc
     1021 agccgatctt gccgcgcgca tcgccgtcgg caccgttgcg gctgaaatcg ccgcccggcc
     1081 acgcggcatg acacgggtga tcttctgctg cttcgcgccg gagagcgccg atcatcacaa
     1141 gaatgtgttt gcagaactgg ggctggtcta aattgctatc catcatgcct ggccagtctc
     1201 aggaaaggtc cagcaatctc acagtgcatc aataacgtca tggccgggct cgtcctggcc
     1261 atccacgtct ttcgtggttc aatgccttga agacgtggat gcccggcaca aggcttgtgc
     1321 tcgggccggc cgaaggccgg acccgagtgc cgggcatgac gaacggctta aacaatccgt
     1381 ggcggcacca atcaggcctt cggctcgaca tccagccgca cgatccagtt ttccaatccc
     1441 cgcttcaccg ccggataaag tttcaggacc tcgggatcgt gaccaggaac aatgtggtgt
     1501 cgcgaggagg cgagcttctg caacgtcttg tagccctcga gcgtatcgcc gacgctgtaa
     1561 gttatcggga acacgcggcc ttcatcgata tgcgagtaca ggtgcgcgct gtcggaggcg
     1621 acaacgacat agccgcgtct ggtcttgacg cgcacgcatt gcaaaccctt cgaatggcct
     1681 ccgatcttgt gcaccgtgat gccgggggct agctcgtcga caccatcgtg aaattcgact
     1741 cgataggcaa ataccttgcg caccattgcc agcacgtcgc tttcgctgaa cgggattcgc
     1801 aacatctggt ggcacatgca gcgaccggta gcgtaggcca tttcggtatc ctgaatgtga
     1861 taacgcgcgt tcggaaacag gtcgtagttg ccggcgtgat cccagtgcat gtgggtggcg
     1921 atgacgtgat cgaccgtgtc gggctccagg ccgagtgcct ttatgccgtc gcccactggg
     1981 tgggtgatct tccgcgcgcg ttccttcgcg gcaacctcat cgaagcctgt gtcgcagaca
     2041 aaggtgccgt gcggcccctg aataacccag acgtagtagg caatcgacgt catctcgtcg
     2101 tggggatcgc cgaagatata gttctctgaa cgcttgcgcg cgtgagtccc gtaacagatt
     2161 gcgtagactt cgtggacgtc gtcgctcatg cctttttctc cgaacccaca gtgaccccgg
     2221 cgcgccgctc gatcatctta acaatcaatg tgaaatcggt atctgcgccg aattcggagt
     2281 tggtcgtttc ccattgatgg agcaccgcac gcatcacggc atcgggcacg tccagcgctt
     2341 tcgcttcctc agcgcacaga cgaacgtcct taagcatgag accggtggcg aagccgtagt
     2401 cgaacgttct tggcaacacc gattgcggaa atttgccgtc tgaggcagtg gtacgaccgg
     2461 agccggcatt gatgacgtcg atcatgaccg ccgcatcgag gcccgccttt acgcccatcg
     2521 caaccgcttc cgaggtcgcc gccatcgccg tggcggacag aaaattgttt gcgagtttca
     2581 tggtctgcgc catgccgggc ttctcgccga tgacgaacac cctgccgaag accgcgagca
     2641 cgtcctttac gatctcaatt tcctgcttag gacccgagac cataacggcc agcgtgccct
     2701 tgctggcacc gccgacgccg ccgctcacgg gacaatcgat ttgcacgata tttttctttg
     2761 ccagcgcccc tgcgattttt gccgcgacac gcgaccctgt ggtcgacaga tcgatgaatc
     2821 gcttgatgcg cttgccgtgg ataacgcctc cctccccgat ggcgactttc tcggaaatct
     2881 gcagcgaggg caggctggcc atcacggtct cgacccggtc ggcaacgtcg gccggcgagg
     2941 atgcgagttg cgcgcccagg gcaatcatgg gcgtcacggc gtcgttacgc gtgtcgtaaa
     3001 ccacgagctt gtgccccgcc tcgatcaggc gccgagccat cggctgtccc atgttcccca
     3061 atccgataaa gccgatgtcc attgctttcc tctgtttgtg ttttcggagg gcgattttgc
     3121 ctccgaggag aacgattgat cctatttcaa gaactctctc cggatcagct cggtgtgttc
     3181 gcctagcgcc gggatcggac cgtaggtgcg ttcctcgccc gcgcgcatgg gagccggggc
     3241 cggcatgctt accggtccgc tcggtgcacc gacggtgatc cgccgcaagt gagcgtgttg
     3301 cgacaacagc tcccagtcat tgacgcgcgc gaaggctatc tcggctgatt ccagcttgtc
     3361 gatcagcgct tcgacgtcga ggcgcgcgaa actcgcggcg accttcgcgt cggtgtcggc
     3421 tcgattctcc gcccgtttcg gattcgtcgc gaatttggga tctttcccca acccgggttc
     3481 gcccagcact ttctctgcca gcacgcgcca ttcgcgatcg ttctgaattg cgatcaagat
     3541 gtcgccgcca tctcggctct tgaacacgcc atatggcgcg atcgctgcgt gggccaggcc
     3601 gatgcgcttg aagggtaggc cgccttcccc atgcagcagc ggcaccgtca tccattcagc
     3661 catggcatcg aacatggaca cggaaatctc ggtgcctttg ttcgtcttgg tcctcgcgac
     3721 cagcgcttcg agaatggcct cgtaagcatt gagccctgca gcgacgtcga caatcgacac
     3781 gccaacgcgc gcgggcgctt cgggtccgcc agtcaccgac gagacgccgg attcggcctg
     3841 gatcagaaga tcgtaggcct tgcgctgggc atatgggccg ctttcgccgt aacccgaaat
     3901 cgaacagcaa atgagccgcg gatagtcctt ccggagccga gccatcgcga agccgagctt
     3961 cgcgatcgcg ccaggcttga ggttctgcac gaacacatcg gcttttccca gcatggcttc
     4021 gagcagcgcc ttgtcgtcag gcttggcgag gtcgagcaca accgactgct tgccgcgatt
     4081 cagccagaca aaattggcgc tttcgccatg gacgacatgg tcgtagtcgc gcgcgaaatc
     4141 gccttccggg cgttcgacct tgatcacccg ggcgcccgca tcggcgagac ggcaggtaca
     4201 ttgcggcgct gccaccgctt gctcgaccga gacgacaagg agtcctgaga gagggagggt
     4261 catgggattc gaaggaatga atgcaccttc aatacgatcg cggcagcccg agaacatgct
     4321 cggccagata cgacaggatc aggttggtcg aaatcggagc gacctgataa agccgcgtct
     4381 cgcggaactt gcgctcgatg tcatattctt cggcaaatcc aaatccaccg tgcgtctgca
     4441 cgcacatgtc ggcggcggcc caggaagcat cggccgccag cagcttggcc atgttggctt
     4501 ccgcgccgat gtcttcgccc gcgtcgtatt tgcgcgcggc ctcatgcacc atcagttcgg
     4561 cggcacgcat ctgcgcataa gcgcgcgcga tcggaaactg cacaccttga ttctggccaa
     4621 ttgggcgacc gaaaagctcg cggtccttgg cgtattgggt cgctttggcg atgaaccatt
     4681 tggcgtcgcc aatgcattcg gccgcgatca agatgcgctc ggcattcatg cccgacagaa
     4741 tgtagcgaaa acccttaccc tcttcgccga tcagattttc cgcgggtacg cgcagatcgt
     4801 cgaagaaaat ctgggtcgtg gcatggttca tcatcgttcg gatcgggttg atggagatgt
     4861 tggcgccctg cgcgagccgc atatccacca ggaataccga cagaccgtcg gtgcgcttct
     4921 tcgtttgttc tttgggcgtc gtacgggcga gcaagagcat caggtcggaa tgctccgcgc
     4981 gcgaggtcca gattttctga ccattgatga cgtaatggtc gttgccttcg cggcgagcca
     5041 tggtgcgcag tgaaagcgta tcggtgcctg acgtcggttc cgtaacgcca aaggcctgca
     5101 ggcgaagctc gccgctcgcg atcagcggca aataacgttg cttctgcgcc ttgcttccat
     5161 gacgcaggat cgtgcccatg gtgtacatct gcgcgtgaca ggcagcccca ttgccgccgg
     5221 aggcatggac ctcttccaga atcgcggcag cggcgcccag attgagaccg ctacccccgt
     5281 attcctcggg aatcagggca gcgagatagc cggctttggt gagtgcggcg acaaattcgg
     5341 tcggataggc gcgctcacgg tcgagcgcgc gccaatattc gccggggaac ttggcgcaca
     5401 atgcgcgcac gcccgcgcgt acgtcggaat attcgtcctc ggcagcgcgc tttttcatgg
     5461 atcgccttcg ctcgtcatgc ccggcacacg ggtccggcct tcggccggcc cgagcacaag
     5521 ccttgtgccg ggcatccacg tcttctctta cgctagttgt aaagacgtgg atggcacgcg
     5581 caactcctgc cttcccgggc gagcagcatg gcaatgccgc gtccaatgcc ccgacctccc
     5641 ccggtaacaa tagcggtttt gcctttgacg aagtccggca tgcgacatcc aaccctgcat
     5701 ttaaacccgt tcgtcccgcg aaagcgggga cccattatat cccattccgc tggattcccg
     5761 cttgcgcggg aatgaacgga gtggtgtgtc cgctctagcc ccaaatctct ttagagagct
     5821 cgacaatcat cctcagcttc gcccactgtt cctcttcccc cagcacgttg ccttcctcgg
     5881 tcgaggcaaa gccgcattgc ggcgagaggc acaactggtc gagcgaaacg aatttggtcg
     5941 cttcctcgat gcggcgatgg atctcgcccc tcggctcgag ccgcccggtt tttgaggtga
     6001 ccaggccgag aacgacggtc cggtccttcg gcagcatgcg caatggttcg aagcctccgg
     6061 cgcgcgcggt gtcgtactcc atgaagaagc cattgacctt gatcttgttg aacaggattt
     6121 cctgcacggc ttcgtagccg cccgccccca tatatgtgga tttataattg ccgcggcaca
     6181 tgtgcatggt gatcgtcatg tcggcgggaa tgtccgacat cgccatattg atgaggtcag
     6241 cgtagaggtc gaccaagcgc tccgggtcgt cgccgcggtc ctgctgggtc tgccggtact
     6301 tggcgtcgca cagcatgggg
//
LOCUS       DATDHO010000778         5738 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_37254, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000778 DATDHO010000000
VERSION     DATDHO010000778.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5738
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37254"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(97..1248)
                     /gene="hemW"
                     /locus_tag="VIY07_15055"
     CDS             complement(97..1248)
                     /gene="hemW"
                     /locus_tag="VIY07_15055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HEY6383110.1"
                     /translation="MSLTTPFAVYVHWPFCLSKCPYCDFNSHVRHGGIDEARFVRAYE
                     TEIAMTALRVPDRAVSSIFFGGGTPSLMQPSSVQKILDCIGKHWTIAPDVEVTLEANP
                     TSVEAARFRGFHTAGVTRVSLGVQSLEDAALKELGRLHTAQEALDAVSIARSIFNRYS
                     FDLIYARPRQTTEDWAKELRRAIAEAAEHLSLYQLTIEPDTPFFGLHQAGKLVVPDDD
                     LARELYDTTQTICGDAGLPAYEVSNHARPGAECRHNLVYWRGHDYAGVGPGAHGRLTI
                     GGRRIATATEKRPEAWLMRVESLGSGLTVEEQLTPGEAADEYLLMGLRLAEGIDPARY
                     TALAGRALDPKRISALREQGAVETTADGRLRITQSGFPLLDAVVADLAA"
     gene            complement(1343..1978)
                     /gene="rdgB"
                     /locus_tag="VIY07_15060"
     CDS             complement(1343..1978)
                     /gene="rdgB"
                     /locus_tag="VIY07_15060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEY6383111.1"
                     /translation="MARKLTGPVVIATHNAGKLREMRELLAPYGIATESSGDVGLPEP
                     RETGKTFAANARIKALAAARASGKVSFADDSGLVVDALDGEPGIHSARWAGPDKDFRA
                     AMNRIQTLLIERGAKRPDQRRAHFVAALCLAWPDDHVEEFEGQVDGVAVWPPRGDKGF
                     GYDPLFRPDGFDRTFGEMTAEEKHGLPPKGQGLSHRARAFIKLADACLARN"
     gene            complement(2014..2727)
                     /gene="rph"
                     /locus_tag="VIY07_15065"
     CDS             complement(2014..2727)
                     /gene="rph"
                     /locus_tag="VIY07_15065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006940224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEY6383112.1"
                     /translation="MRPSRRQADELRAVSLERGVVKYAEGSCFVKFGDTHVLVTASLE
                     ERLPPWLKGQGRGWVTAEYGMLPRATSERTRREASAGKQGGRTVEIQRLIGRSLRSVI
                     DLPALGERQITLDCDVIQADGGTRTASITGAWVALADCLNWMKARDMIKADVLRDHIA
                     AISCGVCKGIAVLDLDYAEDSEADTDANFVMTGSGNIVEIQATAEKIPFSEDQFTALL
                     ALARKGIEKLVGLQKMAVM"
     gene            2828..3913
                     /gene="hrcA"
                     /locus_tag="VIY07_15070"
     CDS             2828..3913
                     /gene="hrcA"
                     /locus_tag="VIY07_15070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEY6383113.1"
                     /translation="MASHDIPIGATQVSLAALNERSREIFRQIVESYLATGEPVGSRN
                     LSRLLPITLSPASVRNVMSDLEQLGLIYAPHTSAGRLPTELGLRFFVDALMQVGDLSE
                     QERRSIESQFAGTRTAKSLEAVLTEASQMLSGLTRSAGVVLTAKNNVRLKHVEFVRLE
                     PERALAVLVGEDGQVENRVLNIPSGLPTSSLIEAGNFLNARIRGKTLGELRGEIEKAV
                     AEGQAELDQLTQKVISAGLASWSGGGDEERQLIVRGHANLLEDLRALEDLERVRSLFD
                     ALETKRGVIDLLGRAERAEGVRIFIGSENNLFSLSGSSTIVAPYRDGKGRIIGVIGVI
                     GPTRLNYARVIPMVDYTARVVSRLLAP"
     gene            4017..4574
                     /gene="grpE"
                     /locus_tag="VIY07_15075"
     CDS             4017..4574
                     /gene="grpE"
                     /locus_tag="VIY07_15075"
                     /inference="COORDINATES: protein motif:HMM:NF010739.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEY6383114.1"
                     /translation="MAEETVETTAAETADPVAEATREAAQYKDKLLRTLAEMENLRKR
                     TEREVLDARAYGIAGFARDVLAVADNMHRALEAIGPDLREGADPKVKALIEGVELTER
                     ELMKILERNGVRKFSPQGEKFDPNFHQAMYEVPTSDQPPGHVAQVIQAGYMLGERVLR
                     PALVAVSKAPVRSSANDNAQSDPAG"
     gene            complement(4577..5521)
                     /locus_tag="VIY07_15080"
     CDS             complement(4577..5521)
                     /locus_tag="VIY07_15080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383115.1"
                     /translation="MFRRVSVYLFAIWVGFASSIPIATAEPIFPPGLRIGLEPPGDLK
                     LSNRFPGFEDSERKVVIAILDLPASAYRELEVAAFNRVQEQLQEVKRESFPFGSGIGF
                     LISGISQQNDVKLYRWSLLAMGIGESVPNLTMLVNVEVPESALSVYPEAVIRKALASV
                     TFRPAPIREQLGLLPFRLDDLSGFQVMQVLPTGTVILADNQADNKGRQPFMIVSVERG
                     GPTEATDRGVFARNLLTNAPVRDLSMQSAEAMRISGAPGHEIRASGKGPAGDPVSVVQ
                     WLRFGSGAFLRVIGVSPAEKWDQSFGRFRTVRDGIAMR"
BASE COUNT         1119 a         1754 c         1740 g         1125 t
ORIGIN      
        1 ggcccaaacg aacgcgcttt gtcggtcgtg cgcgttacgc cttccggcgg tcaggtcgtg
       61 agccccgcac cgcattcgtt ccagccagga acgtaactag gcggcgagat cggccaccac
      121 tgcatcgagc aacggaaagc cgctctgagt tatgcgcagc cggccgtccg ccgttgtttc
      181 caccgcgcct tgctcccgca atgccgaaat gcgtttggga tcgagcgcgc gcccggccag
      241 cgcggtgtag cgagcaggat caatcccttc cgccagccgc agtcccatga ggagatattc
      301 gtcggcagct tctcccggag tcagctgctc ctcgacggtg agcccgctgc caagactttc
      361 cacccgcatg agccaggcct cgggccgttt ctcggtcgca gttgcaatgc gacggccacc
      421 gatcgtcagc cttccatggg cgcctgggcc aacgccggca tagtcatgcc cacgccagta
      481 gacgaggttg tgccggcatt ctgcgccggg tctcgcatgg ttggagactt cgtaggcggg
      541 caaaccggcg tcaccgcaaa ttgtctgggt ggtgtcatag agctcgcgcg ccaggtcgtc
      601 atcgggcacg accagcttgc cggcctggtg caagccaaaa aacggcgtgt cgggctcgat
      661 ggtcaattgg tacagcgaga gatgttcggc cgcctcggcg atcgcgcgcc tgagttcctt
      721 ggcccagtct tcggtggtct ggcgaggacg agcatagatc aggtcgaaag agtatcgatt
      781 gaaaatggaa cgggcgatcg aaaccgcatc gagcgcctcc tgcgcggtgt gaagtcggcc
      841 tagttctttc agcgcagcat cctcgaggga ctgcacgccg agcgaaacgc gggtgacgcc
      901 ggcggtatgg aaaccccgaa atcgcgcggc ttccacactg gttggattgg cctcgagggt
      961 cacttcgacg tcgggtgcga tagtccagtg cttgccgatg caatccagaa tcttttgtac
     1021 cgaggagggc tgcatcaatg atggggtccc gccgccgaaa aaaatgctcg acacggcacg
     1081 gtcgggcacg cgcagagccg tcatagcgat ttcggtctcg taggccctga caaatcgggc
     1141 ttcgtcaatc ccgccgtgcc ggacgtggct gttgaagtcg cagtaagggc atttcgagag
     1201 gcagaacggc caatgtacat agacggcaaa gggcgttgtt aagctcatgt taggcatcat
     1261 aggcggcggg aggcatggca gccagcgcgc aagcgcggtc gtgagcaaca gttgattaaa
     1321 cttgtaacga tcggcaacga actcaatttc ttgcaaggca agcatctgca agcttgataa
     1381 atgcccgggc gcgatgcgac agcccctggc ccttcggcgg caatccatgc ttttcctccg
     1441 cggtcatctc gccgaaggtg cggtcgaacc cgtcgggccg aaaaagcgga tcgtagccaa
     1501 aacctttgtc gccgcgcggc ggccataccg caactccatc cacctggccc tcgaactcct
     1561 caacatggtc atcgggccac gcgagacaca gggcggccac gaaatgcgcg cgccgctggt
     1621 ccggcctctt ggcgcctcgc tcgatcagca gcgtctggat tcgattcatt gccgcgcgaa
     1681 aatccttgtc gggcccggcc catcgggctg aatgaatgcc gggctctccg tcgagggcat
     1741 caacgaccag acccgaatcg tccgcaaacg acactttccc gctggctcgc gctgcggcga
     1801 gcgccttgat gcgcgcgttc gccgcgaatg tcttgcccgt ttcgcgtggt tcgggaagac
     1861 ccacatctcc ggaagattcg gtagcaatgc catagggcgc gagcagttcg cgcatttccc
     1921 tgagtttgcc tgcattgtgg gtggcgatca ccaccggccc ggtgagtttg cgtgccattg
     1981 tctgtcatgg ccggctcccg gccatccacg ccttcacatc acggccattt tctgcaagcc
     2041 gacgagcttt tcgatgccct tgcgcgcaag cgcaagcagc gcagtgaatt gatcttcgct
     2101 gaacgggatt ttttcggcag tcgcctggat ctccacaatg ttgccggagc ccgtcatcac
     2161 gaagttcgcg tcggtgtcgg cttccgaatc ctcggcatag tcgagatcga gcacggcgat
     2221 gcccttgcat acgccacagg agatggcagc gatgtggtcg cgcaagacgt ccgccttgat
     2281 catgtcacgc gctttcatcc aattgagaca gtcggccagc gcgacccacg ctccggtgat
     2341 cgatgcggtc cgtgtgccgc cgtcggcctg tatcacgtcg caatcgagcg ttatttgccg
     2401 ctctccgagt gccggcagat caatcaccga acgcaggcta cgaccgatca aacgctgaat
     2461 ttccaccgtg cggccgccct gcttgcctgc gctcgcctcg cggcgcgtgc gttcggaggt
     2521 ggcgcgcggc agcatgccat attcggccgt gacccaaccg cgcccctgac ccttgagcca
     2581 gggcggaaga cgctcttcca ggctggcggt cacaagcacg tgggtatcgc cgaacttcac
     2641 gaaacaggat ccttcggcgt atttgacgac gccgcgctcg agcgaaaccg cccgaagttc
     2701 atcagcttgt cggcggctcg ggcgcatcgg atgctcctca gtgttaactg cacaccatac
     2761 tcatacatcc ggcttgaaca agaccgcccc aatggtcaat tcttggctgg tctcgaggag
     2821 ttaggtcttg gcgtcacacg acattccgat cggcgcgacc caggtgagtc tggcagctct
     2881 caatgagcgc tcgcgcgaga tttttcggca aatcgtcgaa agttatcttg cgaccggcga
     2941 accggttggt tcgcgtaatt tgtccaggtt gttgccgatc actttgtcgc cggcatccgt
     3001 tcgcaacgtg atgtcggacc tggagcagct tggcctcatc tatgctccgc atacttcggc
     3061 gggccggctg ccgaccgagc ttggccttcg gtttttcgtt gacgcactga tgcaagtcgg
     3121 cgacctgtcg gaacaggaac ggcggtcgat cgagtcgcaa tttgcaggta cccgcacggc
     3181 caaatctctc gaggctgttc tcaccgaagc atctcagatg ctgtcggggc tgacgcgctc
     3241 ggccggcgtc gtgcttactg cgaagaacaa tgttcgactc aagcatgttg aattcgttcg
     3301 gctcgagcct gagcgtgcct tggctgtcct ggtcggagaa gacggacagg tcgaaaatcg
     3361 agttctcaat atcccctccg ggttgccaac gtcatccctg atagaggccg gcaatttcct
     3421 caacgcccgc attcgcggca agacgctggg ggagttacgg ggcgagatcg aaaaagcagt
     3481 cgcggaaggg caagccgaac tcgatcagct gacccagaaa gtcatttcag cgggccttgc
     3541 cagctggtcg ggcggcggag acgaagagcg tcagctcatc gtgcgtggtc acgccaacct
     3601 gctggaggat ctgcgcgccc tcgaggacct tgagcgcgtg cggtctctgt ttgatgcgct
     3661 ggaaaccaag cgcggggtca tagacttgct cggccgggca gagcgggccg agggagtgcg
     3721 catcttcatc ggttccgaga acaatctgtt ttcgctctct ggctcctcga ccatcgttgc
     3781 accttatcgc gatggaaagg gccgcatcat cggcgtgatc ggcgtgatcg ggccgacaag
     3841 gcttaactat gctcgcgtta ttcccatggt cgactacacg gcgcgggtcg taagccgctt
     3901 gctggcgcca tgaacgcttg atttttgctc tcggagccct gatatcctgg ggatccggat
     3961 atactgagga tggattgaga acgatgacgg acccgacagc ccgccagggc gaaaccatgg
     4021 ctgaagagac tgtcgaaacg acagctgccg aaacagcgga tccggtggcc gaggcaacgc
     4081 gcgaagccgc gcaatacaag gacaagctgc tgcgcaccct tgccgagatg gaaaacctgc
     4141 gcaaacgcac cgagcgcgag gttctggatg cacgcgcata tggcatcgct ggttttgccc
     4201 gcgatgtcct tgcggtggcc gacaacatgc atcgggcact cgaagcgatt ggtccggatt
     4261 tgcgggaagg cgcggatccg aaggtcaagg cgctgatcga aggggtcgaa ctgaccgagc
     4321 gggaactcat gaagattctc gagagaaacg gcgtgaggaa attctcccca cagggcgaaa
     4381 agttcgatcc gaattttcac caggccatgt atgaagtgcc gacatccgat cagccgcccg
     4441 ggcacgtggc gcaggtcatt caggcgggct acatgcttgg cgagcgcgtg ctacgcccgg
     4501 ctcttgtcgc ggtaagcaag gctcccgtca ggtcttctgc caacgacaac gcgcaatcgg
     4561 accctgccgg ttgatttcaa cgcattgcga taccgtctcg cacggtccga aaacgaccga
     4621 acgattgatc ccatttctcg gcgggactga ctccgataac tcgcaaaaac gctccgctgc
     4681 caaagcgcaa ccattggacg accgagacgg ggtccccggc cggccctttt ccgctcgcgc
     4741 gaatctcgtg accaggcgcg ccgctgatcc gcatcgcttc ggccgattgc atgctgaggt
     4801 cccgcaccgg cgcattcgtg agcaagttcc gggcgaagac accgcggtcg gtggcttcag
     4861 tcggtccgcc acgttcgact gagacgatca tgaagggttg gcgtcctttg ttgtccgcct
     4921 gattgtcggc aagaatgacg gttcccgtcg gcaacacctg catcacctga aacccggaca
     4981 ggtcgtcaag tctgaaaggc agcagcccca gttgctcccg gatcggcgcg ggtcggaacg
     5041 tgacgctcgc gagcgccttt cggatcactg cttcggggta caccgacaaa gcgctttccg
     5101 gcacttccac attgaccagc attgtaaggt tgggaacgga ctccccgatt cccattgcca
     5161 gcaacgacca ccggtacaat ttgacatcgt tctgctggga aatgccgctg atcaaaaagc
     5221 cgataccgct gccaaacggg aagctctccc gcttcacctc ctgaagctgc tcctgaaccc
     5281 tgttgaacgc ggccacttcg agttcccgat aggcgctggc gggaagatcg agaattgcga
     5341 tgacgacctt gcgctcgctg tcttcgaagc cgggaaagcg gttgctcaat ttcagatcgc
     5401 cgggtggctc caggccgatc cgcaggcctg gcggaaaaat tggttcggcg gtcgcgattg
     5461 gaatgctgct tgcaaaccct acccagatcg cgaacaggta aacggaaact cgtcgaaaca
     5521 tgcctcaagt ccttacgaag atgccggatt ggaaggcctc cctaaccgcc ctcgcccgcg
     5581 ccggcaatgg cccgataacc atcgacgacg gcctcggcct ttcggctcgc gatttcgtga
     5641 ccaactgact tgcgggcccg gggcgccctc ctatatgagc cagtaagccg cgcaaatgcg
     5701 gcgaatcgag tatccagggg gctggatcgg ggggtctg
//
LOCUS       DATDHO010000779         6460 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_336248, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000779 DATDHO010000000
VERSION     DATDHO010000779.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6460)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6460)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6460
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336248"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            778..1749
                     /locus_tag="VIY07_15085"
     CDS             778..1749
                     /locus_tag="VIY07_15085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEY6383116.1"
                     /translation="MLSVYVPRSTTLERIAVETGSPLPENAVWVDMVTPSVQEDRVVE
                     QLLGIAVPTREEMQEIEVSSRLYVENGARYMTATLMCQSDTPAPKTTAVTFILSGHRL
                     VTVRYDDPRPFAIVEHKLARACPAKITGDDVLMDLLDAIIDRSADILERVGGEVDQVS
                     HSIFEPKEGVKQPSYNDVLKTLGRKGDLTSKVRESLVSILRLLLFLANEADNMKWPKD
                     TRAQLQSMQRDVVSLSDHASYLTNKITFLLDAMLGVVNLQQNNIIKIFSVAAVVLMPP
                     TLVASIYGMNFKHMPELDWIGGYPLALLLMLVAAILPYLYFKWRKWL"
     gene            complement(1792..2544)
                     /locus_tag="VIY07_15090"
     CDS             complement(1792..2544)
                     /locus_tag="VIY07_15090"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6383117.1"
                     /translation="MPNSQTNQQRRTLLLTGASRGIGHATVKRFSAAGWRVITCSRHP
                     FPENCPWEAGPEDHIQVDLADEASTLEAIAETKRRLDGRELHALVNNAAISPKAEGGK
                     RLSTLDTTKDDWHHIFQVNFFAPIMLARGLVDVLKAAKGSVVNVTSIAGSRVHPFAGA
                     AYSTSKAALAALTREMASDFGRLGIRVNAIAPGEIDTSILSPGTEKIVEQIPMHRLGT
                     PDEVAKIIYVLCTDTGSYVNGAEIHINGGQHV"
     gene            complement(2594..3235)
                     /gene="pdxH"
                     /locus_tag="VIY07_15095"
     CDS             complement(2594..3235)
                     /gene="pdxH"
                     /locus_tag="VIY07_15095"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEY6383118.1"
                     /translation="MSDTAPIEHPSWLRTGDFTSADEPLRLFTAWLTEATATEPRDPT
                     AMTLATVDSRGLPNARMVLLKGVDERGFVFYTNMDSQKGQELDAHPQAALVFYWKSVN
                     RQVRIRGTVERVSDQEADAYFATRPKQAQIGAWASKQSAPLESRLAFEKAVAIYAAKY
                     AFGEVPRPHNWSGYRIIPLSIEFWQERPFRLHDRIEFKRDHLGAPWNKTRLYP"
     gene            3346..3735
                     /locus_tag="VIY07_15100"
     CDS             3346..3735
                     /locus_tag="VIY07_15100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RT0821/Lpp0805 family surface protein"
                     /protein_id="HEY6383119.1"
                     /translation="MSFGVGGCSLSGPLDSLFGSDRTASITPRPGTKDAAQLPPDADL
                     AYARAAASAVLSRGEKDTSMPWENPRTGTRGTVTPIATAYTQDGRTCRDFLASFVSGN
                     SQSWLQGEACKQQQGEWEVRTLKPWRS"
     gene            3923..4894
                     /locus_tag="VIY07_15105"
     CDS             3923..4894
                     /locus_tag="VIY07_15105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ C-terminal domain-containing protein"
                     /protein_id="HEY6383120.1"
                     /translation="MRDPYEVLGVSKGASEADIKSAYRQLAKKLHPDANKHDPKAATH
                     FAELNAAYEVVGDPDKRKAFDRGEIDAEGKPRFQGFEGFGAQQGRGGFHPGGGAHFES
                     FSFGPDGFRRSGSGAGFEDLLRGMFGRRGSARGFDSTFETDDFAAPQGGQDLHASLTI
                     TLADAAKGTKTRVHLPTGKDVDVKIPAGIASGQQIRLKGQGWPSATGRSGDALITVNV
                     APHPLFKPDGADLRLELPITLYESVLGGKVRVPTLDGAVELAIPAGTNSGRTFRLRGK
                     GLKAKSGAGDLLATIRIVLPERVDDDFKELMKTWRDKKTYDPRGSMG"
     gene            complement(5012..5806)
                     /locus_tag="VIY07_15110"
     CDS             complement(5012..5806)
                     /locus_tag="VIY07_15110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HEY6383121.1"
                     /translation="MIDRNSPVTEDELHAYVDGELPPDRMNAVAAWLADHPEQAALVA
                     SWRLQADSIRAHFGAAVDEPVPQRLKLDQMLSQDRAAGRSWAAMAAAAAIAAFVVGGA
                     AGWMARGASAAAPSRSDVFASEALDAHKLYVVEVRHPVEVPGNERAHMTQWLSKRLGE
                     DLRVPDLQSIGLKLVGGRLLPGPTGAAAFYMYESPSGERFTMYCAKADMPETALRYTG
                     GEKVAAFYWIDDKVAYVVSGPADRERLEKVTKAAYEQVDKTGAKKL"
     gene            complement(5826..6317)
                     /locus_tag="VIY07_15115"
     CDS             complement(5826..6317)
                     /locus_tag="VIY07_15115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEY6383122.1"
                     /translation="MATFRQNVEATIPALRRYARALTRDSDIADDLVQDTLVRALRSE
                     HLFHGGDVRSWLYTILTNLNRNRLRSLARRPALSPIEDNDAPDLAGPEAGGRDIERAL
                     ATLVDDQRNALLLVVLEGLSYREVAEVQGVPIGTVMSRLARARVQIKNYLDGARPALR
                     RVK"
BASE COUNT         1296 a         1992 c         1942 g         1230 t
ORIGIN      
        1 gatcgtcgac tgcatgcagc cacccagaat gacgccgcac ccgaacaaaa cgaccaacaa
       61 cccccgtgcc gccattttct tcttcctctt ccccgcacgc ctttttggcg ccgcaacaaa
      121 aattccctga ggtcgcaatt aacctaaaaa atcacggcga agccatgatt tccagcgagc
      181 ccgccatcac cttcctgtgt acctgtggca ggaatgccgc actcggttcc ccgcgccgtc
      241 aacattaaaa atgactttcg ccgcaagacc ttaaggagga gtttaccatg gccgtattta
      301 ttactgtcgg aacagcggca ggcgacggaa atgccacaag acgacacgat ttgccgcgca
      361 attccgccct actgactcac cacattgggt tcgtggggac gccgaggaag gatcggagtt
      421 caggacaatg accacgaaag caacggagca aaagcaagac tccgcaaggc aatacacaaa
      481 cctcgataat cgctacggga agatcgggat ttccgcagtc gctgccgcga tatgccacca
      541 gggcgaacag cggaacgtga ccgagtctca tccagagcca tacgatcgcg actgacgcct
      601 cgggcgtcgg ctgcggcact aaacgatacg tttcgacatc atcaccacga ctgtgcacgg
      661 ccggcggtca ccggccgtgc tgcaattatg tcttgcgcaa atccgcgcga tcgggtcatt
      721 gaggaataac ccgcccgcgg catgatcgtg aggagatcat gcgcaagatg gtgatgaatg
      781 ctttcggttt acgttccgcg cagcacgaca ctcgagcgaa tcgcggtcga gactggatcg
      841 ccgctgccgg aaaatgctgt gtgggtcgac atggtcaccc cttccgtgca ggaagacagg
      901 gtggtcgagc agttgctcgg gatcgccgta ccgacccggg aggagatgca ggagatcgaa
      961 gtctcaagcc gcctctacgt ggaaaacggc gcgcgctata tgactgcgac actgatgtgc
     1021 cagtcggaca cgcccgcgcc aaagacgacg gctgttacct tcatcctctc gggccatcgc
     1081 ctcgtcaccg tgcgctacga cgatccgcgg cctttcgcaa tcgtcgagca caagctcgcg
     1141 cgtgcctgcc ctgccaaaat cacaggcgac gatgtgctga tggatctgct cgatgcgatc
     1201 atcgatcgct cagcggacat cctggagcgt gtggggggtg aggtcgacca ggtttcgcac
     1261 tcgatatttg aaccgaaaga gggggtcaag cagccctcct acaatgacgt tctcaagacg
     1321 ctcggtcgca agggcgatct gacgtccaag gtccgcgaaa gtctggtatc gatcttgcgc
     1381 ctgctgctgt tcctggccaa cgaagccgac aacatgaaat ggccgaagga cacacgcgca
     1441 cagctgcaat cgatgcagcg agacgttgtg tccctttccg atcatgccag ctacctgacc
     1501 aacaagatta cgttcctgct cgatgccatg ctcggcgtgg tgaatcttca gcagaacaac
     1561 atcatcaaga ttttctcagt ggctgcggtg gttctgatgc cgccgactct cgtcgcctcg
     1621 atctacggaa tgaatttcaa gcacatgccg gagctggatt ggatcggcgg ctatccactt
     1681 gcgctgttgc tgatgctggt ggctgccatc ctgccgtatc tgtatttcaa gtggcgcaaa
     1741 tggctgtgac gtgcgcagag aggctttgtc ggcgggtttg tcccggtgac ctcatacgtg
     1801 ctgaccaccg ttgatgtgga tctccgcgcc attcacgtac gagcccgtgt cggtgcacag
     1861 gacgtagatg atcttggcga cttcgtccgg cgtacccagg cgatgcatag ggatctgttc
     1921 gacgatcttc tcagtacctg gagagaggat ggacgtatcg atctcgcccg gcgcgatcgc
     1981 attgacgcgg atgccaagcc gtccgaaatc gctggccatt tcgcgggtaa gggcggccag
     2041 cgccgccttc gacgtcgaat aggctgctcc ggcgaacgga tgcacgcgcg agccggcaat
     2101 cgatgtgacg ttgacgaccg agcccttggc ggccttgagc acatcgacaa gcccccgcgc
     2161 cagcatgatc ggcgcgaaaa aattcacctg aaaaatgtgg tgccaatcgt ccttcgtggt
     2221 gtcgagcgtg ctcaggcgct tcccgccttc ggccttgggc gagatcgccg cgttgttgac
     2281 cagcgcgtgc agttcgcggc catcgagccg acgcttggtc tcggcaatcg cttccaacgt
     2341 gctggcctca tcggcgagat cgacctgaat gtgatcctcg ggaccggctt cccacggaca
     2401 attctccggg aatggatgac gcgagcaggt gatcactcgc cagccggcgg cggaaaaacg
     2461 tttgacagtc gcgtggccga tgccccggct cgctcctgtc aggagaagcg tgcggcgctg
     2521 ctggtttgtc tgtgaattcg gcatgccaac tctggaatgg ttctagcgtg tgcagctgct
     2581 cgaccagcct aactcacgga tagagccgcg tcttgttcca tggcgcgccc aggtgatcgc
     2641 gcttgaactc gatccgatca tgcaggcgaa acggccgctc ctgccagaat tcgatcgaga
     2701 ggggaatgat ccgataaccg gaccaattgt gcgggcgcgg cacctcgccg aaggcatatt
     2761 tggcggcata gatcgccact gctttttcga aggccagacg actttcgagc ggcgccgatt
     2821 gcttgctggc ccaggcgcct atctgcgcct gcttgggccg ggtggcgaaa taggcgtcgg
     2881 cttcttggtc gctgacgcgc tcgactgtgc cgcggatgcg gacctgccta ttcacagact
     2941 tccagtagaa caccagggcc gcctgggggt gcgcgtccaa ttcctgccct ttttgactgt
     3001 ccatgttggt atagaaaacg aacccacgct catcgacgcc cttgagcagc accatccggg
     3061 cattggggag gccccgggaa tcgacggtgg caagcgtcat ggcggtgggg tcgcgcggtt
     3121 cggtggccgt cgcctctgtc agccacgcgg taaatagccg caatggctca tcggcgctgg
     3181 tgaaatcacc agtccttaac caactcgggt gttcaattgg cgctgtgtcg gacatcttct
     3241 ggggtactta gcgtggggcc cagtaccagt cgagaccgtc gcctttatag tcgaagcgta
     3301 tgccgccgcc tatggcgagg gctggcgaca gcgggcgcta ttgcgttgtc gtttggcgtc
     3361 ggtggctgca gcctgtcagg tccgctcgac tcgctgttcg gatcagaccg tactgcctcg
     3421 atcacgcctc ggcctggcac gaaggacgcg gctcaactgc cgccggacgc cgatcttgcc
     3481 tacgcacgcg ctgccgccag cgcggtcctc agccgaggcg agaaggacac cagcatgccg
     3541 tgggaaaacc cacgcaccgg cacccgtggc acagttaccc cgatcgcaac cgcgtatacc
     3601 caggacgggc gaacctgccg cgattttctg gcgagcttcg tgagcggcaa tagccaatca
     3661 tggttgcagg gtgaagcctg caagcagcag cagggcgaat gggaagtgcg cacgcttaag
     3721 ccctggagat cctgaacaag cgggtcatcg gtggcgcgat aaagcaggtc cgcccgatcc
     3781 gagctttgct acctgatctc gtgccccacc ccggaattcc aagtcttttc gcgttgcatc
     3841 gatcatgcag gaaccccaca ttatgggtgt cgcagatatt ctgcgagcga gcaggggtgg
     3901 acttcagggg agtctggaca cgatgcgcga cccctatgag gtgctggggg tttcaaaggg
     3961 tgcgagcgag gcggacatca agagcgccta tcgccagctt gcgaaaaaat tgcatccgga
     4021 tgccaacaag cacgacccca aagcggccac gcacttcgcc gagctcaatg ccgcatacga
     4081 agtcgttggc gatcccgaca agcgcaaagc attcgatcgc ggcgagatcg atgccgaagg
     4141 caagccgcgt ttccagggtt tcgaaggctt cggcgcgcag cagggcagag gcggcttcca
     4201 cccgggtggg ggggcgcatt tcgaaagttt cagctttggt ccggatggtt tccgccgctc
     4261 cggcagcggc gccggtttcg aggacctgct gcgcgggatg ttcggccgta ggggttcagc
     4321 gcgcggcttt gattcgacct tcgaaaccga cgattttgcg gcgcctcaag gcggacagga
     4381 cctgcatgcg tcgctgacga tcacgctcgc cgatgcggcc aaaggcacca agacacgcgt
     4441 gcacttgccg accggcaagg acgtcgacgt caagattccg gcgggaatcg cgagtggtca
     4501 gcagatccgg ctgaaaggcc agggctggcc gagcgcgacc ggcaggtcgg gcgatgcgct
     4561 gatcaccgtc aacgtggcgc cgcatccgct gttcaagccc gatggcgccg acctgcgcct
     4621 ggagttgccg atcacgcttt acgaatcagt tctcggcgga aaagtacgcg tccccacgct
     4681 cgatggagcg gtggagcttg cgattcctgc cggcacgaat tcggggcgta cattccgtct
     4741 ccggggcaag ggtctgaaag ccaaaagcgg cgcgggtgac ttgcttgcga ctatccggat
     4801 cgtgctcccc gagcgtgtcg atgacgactt caaagagctc atgaagacgt ggcgcgacaa
     4861 gaaaacgtac gacccgcgtg ggtccatggg gtgaccatta ctccaaaatc cgttcattcg
     4921 cgcgtaagcg ggaatccagt gccgcgcgcg gattaccgtc tgacaagctc atgcctggat
     4981 ccccgctttc gcggggaggc ttacgcaaaa actacaactt cttcgcgcct gtcttgtcga
     5041 cctgctcgta ggccgccttg gtcactttct cgagccgttc gcggtcggcg gggccgctga
     5101 cgacataagc aaccttgtcg tcgatccagt agaatgcagc gactttctcc ccgccggtat
     5161 atcgcagcgc cgtctccggc atatcggcct tggcgcaata catggtgaag cgctcgccgg
     5221 acgggctttc atacatataa aaagccgcgg cgccggtcgg accgggaagc agccggccgc
     5281 ctacgagctt cagtccgatc gactgaaggt ccggaacacg caaatcctcg cccagtcgct
     5341 tcgacaacca ttgagtcatg tgggcgcgct cgttgcccgg cacttcgacg ggatggcgca
     5401 cctccacaac atagagcttg tgcgcgtcaa gcgcctcgct ggcaaacacg tcggagcggc
     5461 ttggcgccgc ggcagaagct ccgcgcgcca tccagcccgc cgcgccgccg accacgaaag
     5521 cagcaattgc tgccgccgca gccatggccg cccacgaccg cccggccgct cgatcctgac
     5581 tgagcatctg gtcaagcttg agccgctgcg ggaccggctc gtcgacagcg gcgccgaaat
     5641 gcgcacggat actatcggcc tgaagccgcc aggacgctac cagcgcggcc tgttcgggat
     5701 gatcagcaag ccacgccgcg acggcgttca tgcggtccgg cggcagctcg ccgtcaacat
     5761 aggcatgcag ctcatcctcg gttacgggtg aatttcggtc gatcataggt tcaccttctc
     5821 tctcttcatt tcacgcggcg cagcgcaggg cgcgcgccgt cgagataatt tttgatctgt
     5881 acgcgtgcac gcgccagacg cgacatcaca gtaccaatcg gcacgccttg cacctcagcc
     5941 acttcgcggt agctaagacc ttccagcacc accaggagca aggcattgcg ctggtcatca
     6001 accagcgtcg cgagcgcacg ttcgatatcg cgcccgcccg cttccggtcc ggcaagatcc
     6061 ggggcgtcgt tatcctcgat cggcgaaaga gccggacgcc gcgccagcga cctgagccga
     6121 ttgcgattga ggttggtcag gatcgtatac agccagctgc gcacgtcgcc cccatgaaac
     6181 aggtgttccg agcgcaacgc gcgcaccaac gtgtcctgaa ccaggtcgtc ggcaatgtcc
     6241 gaatcgcgtg tcagcgctcg ggcatagcgt cgcaacgcgg gtatcgtcgc ctcaacgttc
     6301 tgacggaacg tggccaatca ggccctcctt taatttcagc ggtgcgaaca attgaccgga
     6361 tcgcgcccta aacgcaggtc tgcgggatac ggtcggtgcc ctcgacgtca aaaccccgcc
     6421 gccacaatca tattcccgaa aatgaattga aataacaacg
//
LOCUS       DATDHO010000780         2810 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_336430, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000780 DATDHO010000000
VERSION     DATDHO010000780.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2810)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2810)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2810
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336430"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1057)
                     /gene="ugpC"
                     /locus_tag="VIY07_15120"
     CDS             complement(<1..1057)
                     /gene="ugpC"
                     /locus_tag="VIY07_15120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEY6383123.1"
                     /translation="MAEVALRQVVKKFGDVEAVRSIDLDIPDNEFVVLVGPSGCGKST
                     TLRMIAGLEEVTSGEICIGGEIVNDLPPKDRDIAMVFQNYALYPHMTAFENMSFGLKL
                     RKFPKSEIRQRVEHAARILDITELLDRRPKALSGGQRQRVAMGRAIVRNPKVFLFDEP
                     LSNLDAKLRVQMRTEIKRVHQKVKTTTVYVTHDQVEAMTLADRVVVMNHGRIEQIGTP
                     QELYHQPRTRFVAGFIGSPAMNFIPCQLEQNGAGMRVRVAGNIALPVPAGRSARYQPF
                     VGKPVTLGLRPEHITEPRHNGRNDGCDFAVTLDVVEPLGMETMVFFTVNGTEICGRVE
                     PSSASDAGATMRLHANVD"
     gene            complement(1063..1959)
                     /locus_tag="VIY07_15125"
     CDS             complement(1063..1959)
                     /locus_tag="VIY07_15125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEY6383124.1"
                     /translation="MTSIAVSVPRSSGARPASLKRSRRWALITSYVFLVIFAIFFLMP
                     PYYMIVTSLKSDAEVAHMATNPWIIANGITLDQFKLLFTQTDFLIFFKNTAIVTVAVV
                     VITMVVSVLAAFSLGRMRFWGSSILATGIFLTYLVPDTLLFIPLFQIVKAIGLLNSYW
                     GMVLVYPTLTVPFCTWIMIGYFQSIPKELDEAALIDGAGHMQMLLKIFIPVALPGIIA
                     ATIFAFTVSWAAFVYPMAFLYSADQQVLTVGTVTSLIRADVYKWGMLMAGALVAAAPP
                     LVIYAFLMDYYIAGLTSGATKG"
     gene            complement(1956..>2810)
                     /locus_tag="VIY07_15130"
     CDS             complement(1956..>2810)
                     /locus_tag="VIY07_15130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEY6383125.1"
                     /translation="RSTIAFLMCLPLIAIIFSLVIYPAFYSIYLSMLNKAQTRFVGLG
                     NFSFLLSRDVFWMVVWQSAIFALSAVFFKAVIGLITAHLINNLPAKGQRKWRGMLLVP
                     WVIPLALSSLGWWWLFDPTHSAFNWILKGLGFNEIAWLSDPYWARFSVILVNVWYGAP
                     FFLIMYLAALKSVPEQLYEAAAIDGANAWQKFIHITLPMMRNIIAITVLFSLIVTFAN
                     FDIVQIMTAGGPRNMTHVFATYSFLLGIRSGDLPLGAATSLFMFPILAIAAIFILRGV
                     RKRGRDIA"
BASE COUNT          656 a          788 c          858 g          508 t
ORIGIN      
        1 gatcgacgtt ggcgtgcagt cgcatggtgg cgcctgcatc ggacgcgctg ctgggctcga
       61 cacggccgca aatttcggtg ccattcacgg taaagaacac catcgtctcc atgccaagcg
      121 gctcgacgac gtccagggtc accgcgaagt cgcatccatc gttgcgcccg ttgtggcgcg
      181 gttcggtgat gtgctcgggg cgcagaccaa gggtgaccgg ttttccgaca aatggctggt
      241 agcgggccga acggcctgca ggaacgggca gagcaatgtt gccggcaacg cgcacgcgca
      301 tgccggcgcc attctgttca agctggcacg ggatgaaatt catcgccggc gaacctatga
      361 aaccggccac gaaccgtgtg cgcggctgat gatagagctc ctgcggcgtt ccgatttgct
      421 cgatccggcc gtggttcatg accaccacgc ggtcggcaag cgtcattgct tcaacctgat
      481 catgggtgac ataaaccgtt gtcgtcttca ccttctggtg cacgcgcttg atctccgtgc
      541 gcatctgcac gcgtaacttc gcgtccagat tcgacaacgg ctcatcgaag aggaaaacct
      601 tggggttacg gacaatcgcg cggcccatag ccacccgctg gcgctgaccg ccggacaatg
      661 ctttgggacg gcggtcgaga agctccgtaa tgtccagaat gcgggccgcg tgctcgacgc
      721 gctgacgaat ctcgcttttg gggaacttgc gcagcttgag gccgaacgac atgttctcga
      781 acgccgtcat atgcgggtag agcgcgtagt tctggaacac catcgcaatg tcgcggtcct
      841 tcggcgggag gtcattgacg atctccccgc cgatgcagat ctcgccggag gtgacctcct
      901 caagaccggc gatcatgcgc agggtcgtgc tcttgccgca gccggaaggc cccaccagca
      961 cgacgaattc gttgtcggga atatcaaggt cgatcgaacg tacggcttcg acatcaccga
     1021 atttcttgac gacctgacgc agcgcgactt cggccataac gttcagccct tggtggcgcc
     1081 ggaggtcagt ccggcgatgt agtagtccat gaggaatgcg tagatcacca gcggcggcgc
     1141 ggctgcaacc agcgcgccgg ccatcaacat gccccacttg tagacgtcgg cccgtatcag
     1201 gctcgtgacc gtgccgactg tgagaacctg ctgatcggcc gaataaagaa acgccatcgg
     1261 atacacgaag gccgcccatg acaccgtgaa agcgaagatg gtggccgcga taattcccgg
     1321 cagcgccacc ggaatgaaaa ttttcagcag catctgcatg tggccggcgc catcgatgag
     1381 cgccgcttcg tcaagttcct tggggatgga ttggaaataa ccgatcatga tccacgtgca
     1441 gaagggcacg gtgagcgtcg gatagaccaa caccatgccc caataggagt tgagcagccc
     1501 gatggctttc acgatctgga acagcgggat gaacagcaac gtgtcgggta cgagataggt
     1561 gagaaaaatt cccgtagcga ggatgcttga tccccagaat cgcatgcggc caagcgagaa
     1621 cgcagcaagc acgctcacga ccattgtgat gacgacgaca gcgaccgtca cgatcgcggt
     1681 atttttgaag aaaatgagga aatcggtctg ggtgaacagg agcttgaact gatcgagcgt
     1741 gatcccgttg gcgataatcc acgggttggt cgccatgtgc gcgacctcgg cgtcgctctt
     1801 aagcgaggtc acgatcatgt agtagggagg catcaggaag aagatggcaa aaatcaccag
     1861 aaatacgtac gaggtgatca gcgcccaccg gcggctgcgc ttgaggctgg cgggccgtgc
     1921 accgctcgat ctaggaactg aaaccgcgat cgaggtcatg cgatgtccct cccgcgtttg
     1981 cgcacgccgc gcaagatgaa aatcgccgcg atcgccagga tcggaaacat gaacagagac
     2041 gttgccgcgc cgagcggcag gtccccggat cgaatgccaa gcaggaacga ataggtcgca
     2101 aacacatgcg tcatgttgcg cggcccgcct gcggtcatga tctggacaat atcgaagttg
     2161 gcgaaagtga cgatcagcga gaacagcaca gtgatggcaa taatgttgcg catcatcggc
     2221 agcgtaatgt ggatgaactt ctgccaggca ttcgcgccgt cgatcgccgc ggcttcgtaa
     2281 agctgctcgg gtactgattt caacgcagcc aggtacatga tgaggaagaa cggcgcgccg
     2341 taccatacat tcacaaggat cacggaaaac cgtgcccaat agggatcgct cagccacgcg
     2401 atttcattga agccgagacc cttcaatatc cagttgaaag cggagtgggt gggatcgaac
     2461 agccaccacc accccagcga cgacaatgcc aacgggatga cccacggcac gagcagcatg
     2521 ccgcgccact tgcgctgacc tttggcgggc agattgttga tcaggtgtgc cgtgatcaag
     2581 ccgatgactg ctttgaagaa gacggcagag agcgcaaaga tcgcggactg ccatacgacc
     2641 atccagaaaa cgtcgcggga gaggagaaag ctgaagttgc ccaggccgac gaagcgcgtc
     2701 tgcgccttgt tcaacatcga caggtaaatc gaatagaacg ccgggtatat gacaaggctg
     2761 aagatgatgg cgatcagtgg cagacacatc aggaaggcaa tggtcgatcg
//
LOCUS       DATDHO010000781         3327 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_37441, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000781 DATDHO010000000
VERSION     DATDHO010000781.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3327)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3327)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3327
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37441"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(155..358)
                     /locus_tag="VIY07_15135"
     CDS             complement(155..358)
                     /locus_tag="VIY07_15135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383126.1"
                     /translation="MPTFLLSPLVKWSLAALGGAMVVHWAIKEARRINEELEQARRVK
                     AKITDGENRPTLRRDPVTGEYRL"
     gene            581..1564
                     /locus_tag="VIY07_15140"
     CDS             581..1564
                     /locus_tag="VIY07_15140"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6383127.1"
                     /translation="MSKTAKTRWTTLALVVFATLSLLPAPCTAADAWPSRTVHFIVTL
                     GPGSGVDIGARLLADKLSARWGQPVVVENRPGGDGMVAITSFLSAKDDHTLLVSPVSS
                     FTAHPYFHDKLPYDQRDLIPISRISKTVVAVSVPASLNVNSLKELEALARSKPGQLNW
                     TTATGFTDFVFAGYLHAVGLKMAKVPYKNPAGAAADLASGVIQVYMPAYAIVRPQVEA
                     GAVKVLAVTNRERAPALPNVPTAVEAGYPSLEFDGLVGLFGAPGISDDVRTKIANEVR
                     AAASDPEIVKRLTATGQIVSPGNAAEFAASIAQQREQASAIAKLFGNKPVQ"
     gene            complement(1755..2591)
                     /locus_tag="VIY07_15145"
     CDS             complement(1755..2591)
                     /locus_tag="VIY07_15145"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEY6383128.1"
                     /translation="MPRRFRTDIPVVPVVRLAGVIGVVTPLRPGLLLSTIARSLDRAF
                     AMPHARALALVINSPGGSPSQSHLIFRRIRQLADEKKIPVLAFVEDVGASGGYMLACA
                     ADEIICNEFSIVGSIGVVGASFGFHDLMQKVGIERRLYTAGDHKAMLDPFLPEKPEDV
                     QRIKAIQKDVHENFIALVKERRGSKLKGSDETLFSGEFWTAQKAIDLGLVDRTGDLRS
                     TLRERFGEKVHTPLISAERSLFGRRVPAVSLVDAFSHPPALADDLISALEVRAIWGRY
                     GF"
     gene            complement(2999..>3327)
                     /locus_tag="VIY07_15150"
     CDS             complement(2999..>3327)
                     /locus_tag="VIY07_15150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEY6383129.1"
                     /translation="GTPGLLRRWIATAAWLLRPGGVLTLIWRADGLNEVAGELRSAFG
                     ALAVQPVLPRPTAPAIRVLIRAVKAGAGTQMDHPPLSLNDEQGEPTEAAEDVLRGGST
                     LTISQA"
BASE COUNT          668 a         1011 c          998 g          650 t
ORIGIN      
        1 ccccgcgatt gatcaaagaa gcacggtcgc gtttggggaa atcgatgctt tcttttcagt
       61 tgatggggtg ggtcctgatc ctgctgttct tcggcgcatt gattggcggc cacaagaacg
      121 tggccgaccg ctgaaagccg cagattgatc ggtgctagag ccggtattcg ccggttaccg
      181 gatcgcggcg aagcgttggc cggttttcgc catcggtaat cttggccttc acgcgcctcg
      241 cctgttcgag ctcctcattg atccggcgcg cttccttgat cgcccaatgc acaaccatgg
      301 cgccgcccag agcggcgagc gaccacttga ccagtgggga cagcaaaaac gtcggcatag
      361 gcagctccaa taggatcgaa ccgcaaactc ggttgcgaag gcggcatttt cgcggcggac
      421 ccgcccttgt gcaagaggtc aacagcgtcg cctgtgcgcc aattgagctt atgggtcaat
      481 gagtttggcg gcgcataggc taaactgtgg tcgatttttt tcagtaagac gccgcaacgg
      541 ccatcgtttt gagtggccgc ccggctcgtg gaggagagcc atgagtaaaa ccgcgaagac
      601 ccgctggacc accctggcgc ttgtcgtatt tgcaacgctg tcgctgctgc cagccccatg
      661 cacggcagca gatgcctggc ccagccggac ggttcacttc atcgtgacgc tgggaccggg
      721 tagcggcgtg gatatcggcg cgcggctgct cgccgacaag ctgtccgcgc gctggggcca
      781 gcctgttgtc gtcgaaaacc gtccgggcgg cgatggcatg gtcgccatca ccagctttct
      841 tagcgcaaag gacgatcaca cgctgctcgt ctcgccggtg agctccttca ccgcgcatcc
      901 ctattttcac gacaagctcc cctacgacca gcgggacctc attccgatct cgcgcatatc
      961 caaaactgtg gtcgcggtca gcgttcccgc ctcgctgaac gtcaattcgc tgaaagagct
     1021 ggaagctctc gcgcgttcaa aacccggcca gttgaactgg acgaccgcca caggcttcac
     1081 cgactttgtg tttgccggct atctgcacgc cgtcggtctc aagatggcga aagtgcctta
     1141 caagaatccc gccggcgctg cagcggatct cgcgtctgga gtcatccagg tctacatgcc
     1201 cgcttatgcg atcgtgcgtc cgcaggtgga ggccggagcc gtcaaagtgc tcgcggtcac
     1261 aaaccgcgaa cgcgcacctg cgctccccaa tgttcccacg gcggttgaag caggctatcc
     1321 gtcgctcgaa ttcgacgggc tggttggatt atttggagcg cccggtatat ccgacgatgt
     1381 ccgcaccaag atagccaatg aggttcgcgc ggcggcgtcc gaccccgaaa tcgtgaaaag
     1441 actgaccgcc acggggcaaa tcgtcagtcc aggaaacgcc gccgaatttg ctgcctcgat
     1501 cgcgcagcag cgcgagcagg cgtccgccat tgcgaaactg ttcggcaata aaccggtgca
     1561 gtaggcgcga tcatccgagc tccgttcgtc cccgcgaaag cggggagcca gagtattgcc
     1621 gcgttgcaaa tttctcctgg attcccgctt acgcgggaat gaacgggatt acttctgccg
     1681 ttcgtccccg cgaaagcggg gacccagagc gtagtgttct tctgaatttc cgctggtgta
     1741 aggaatgagc ggaatcaaaa accgtagcgt ccccagatcg cgcgcacttc aagggcggaa
     1801 atgagatcgt cggcgagagc aggcgggtgg ctgaacgcat cgacaaggct gaccgccggc
     1861 actcgtcggc cgaacagcga gcgttcggct gaaatcagcg gcgtatgcac cttctcgcca
     1921 aatcgttccc tcagagtgga tcgcaggtca ccggtgcgat ccaccaggcc caaatcaatt
     1981 gccttctggg cggtccagaa ctcacctgaa aacagggtct cgtcggaacc tttcagcttc
     2041 gacccgcgac gctccttgac cagcgcaatg aaattctcat ggacgtcctt ctggattgcc
     2101 ttgatcctct gcacgtcttc cggcttctcc ggaagaaatg gatcgagcat cgccttgtga
     2161 tcgccggccg tataaagccg ccgctcgatg ccaaccttct gcatcagatc gtgaaaccca
     2221 aaagacgcgc cgaccacccc gatcgatccg acgatcgaga actcgttgca gataatctcg
     2281 tcggccgcgc aggccaacat gtatcccccg gacgcaccga catcctcgac gaaggccagc
     2341 accggaatct ttttttcgtc ggcaagctgc cggatccgcc ggaagatgag atgcgattgt
     2401 gacggcgagc cgccgggcga gttgatgact aaagccagtg cgcgcgcatg aggcattgcg
     2461 aaagcgcggt ccaatgatct ggcgattgtc gagagcagca aaccggggcg cagcggggta
     2521 acgaccccaa tgacgccggc aaggcgcacc accggcacga caggtatgtc ggtgcggaac
     2581 cgacgcggca cgagccgggc tgccgcactc acaaggcggg cgccaaagtt gggcggcgac
     2641 agagacgtgg aactggccat ccatccagat acccagccct gaccgctcaa gtcaaaggca
     2701 acggaacccg agtcggcttt cccagtgaaa taaattcggc ggtttgcgcg aaaagcgcgc
     2761 cgcgttgcct aaattttaac tttggaatgc tttttgcaga aggttaggtg ctggcgcttt
     2821 tgaagaggcg ggtcgatgga tcccaaaatc acacttctgt tcctgctaat cggcagtgtt
     2881 attggtcttt cgtaccttag cgacgaaaaa cgagggcgct tctggcgcca gctgagcgat
     2941 atgcgttggc gcaattttgt gcccggacgg cgcagggctt aggcaggctc gcggaaggct
     3001 acgcctgcga gattgtcagc gtacttcccc cgcgtaaaac atcttcggca gcctctgttg
     3061 gctcgccctg ctcatcattg aggctgaggg gcggatggtc catttgcgtg ccggccccgg
     3121 cttttaccgc gcggatcagc acgcggatcg caggcgcggt cggccttggc agaacaggct
     3181 ggaccgcgag cgcgccgaag gcggaccgaa gctcgcctgc gacttcgttc agtccgtcgg
     3241 ctcgccaaat gagcgtaagg actccgcctg gtcttagcag ccatgcggcg gtggcaatcc
     3301 agcgccgaag cagtcccggt gttccga
//
LOCUS       DATDHO010000782         9204 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_480070, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000782 DATDHO010000000
VERSION     DATDHO010000782.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 9204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9204
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_480070"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..501)
                     /locus_tag="VIY07_15155"
     CDS             complement(139..501)
                     /locus_tag="VIY07_15155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383130.1"
                     /translation="MRLLNILVIGALILAASFVYKIKFDSTLQAERVAKLRGELRRER
                     SAIAALRAEWARLDTPGRIQGLADRHLGLQPIKATQFDKFDRLPDRPPTPAPTPGDPI
                     GAMLSPILDATGSVSPRR"
     gene            complement(505..1536)
                     /gene="rsmH"
                     /locus_tag="VIY07_15160"
     CDS             complement(505..1536)
                     /gene="rsmH"
                     /locus_tag="VIY07_15160"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEY6383131.1"
                     /translation="MTAGGGGSAVAGGPALHIPVLGAAAIEFLQPRNGGVYIDATFGA
                     GGYTRAILAAADCKVIGIDRDQTAIALGADLVERSGGRLTLIEDRFSNLDALAREAGF
                     DAVDGVVLDLGVSSMQLDSAGRGFSFRLEGPLDMRMGGEGPSAADIVNSASERTLADI
                     IFSLGEERRSRSVARAIVRARTDAPIETTRKLAETVASVVRSRADEIHPATRTFQALR
                     IYVNDELGELLKGLQAAERILKKGGRLVAVSFHSLEDRIVKTFLADRSQVRAGSRHAP
                     ELSRQAPTFRMLAKRPITANDDEIARNPRARSAKLRPAERTEAPARVAVPAGLVPALP
                     SLADVPRGR"
     gene            complement(1533..2012)
                     /locus_tag="VIY07_15165"
     CDS             complement(1533..2012)
                     /locus_tag="VIY07_15165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEY6383132.1"
                     /translation="MDRFVANFTLRLDSKGRVSIPGPFRSVLARDGLEGLYCYPALDR
                     PAIDAGGNALMAEIEALIGRYAPFSDQREQFALALYGTSETLKIDGEGRVVLSENLKR
                     HAGITETVAFVGLGNKFQIWEPGRFKSELAEATQKVRALKGELGSQVAARDALGARE"
     gene            2280..3020
                     /locus_tag="VIY07_15170"
     CDS             2280..3020
                     /locus_tag="VIY07_15170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase family protein"
                     /protein_id="HEY6383133.1"
                     /translation="MWIGLLSDIHANREALEATLDHARRAGISRFVFLGDYVGYGADP
                     GYVVDTVIREVEAGAVALLGNHDAAIGSGPGGMNSIAAEAIEWTRPRLDSAQREFLAQ
                     LPLTFDDNSRLFVHASAHAPAHWEYVTDVPAASRSFMATQAHATFCGHVHVPELFHLS
                     STGKIAGFQPVQAVEIPLLANRRWLAVLGSVGQPRDFNPTACYGALDVERNVLTYVRV
                     PYDNETAARKVREAGLPAILSDRLIVGA"
     gene            3024..3413
                     /locus_tag="VIY07_15175"
     CDS             3024..3413
                     /locus_tag="VIY07_15175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383134.1"
                     /translation="MNRRDLQAGQIIDGFRLVEPLESGGMASFWRVTRDGIDTPMVMK
                     IPLLRPGEDPLTIIGYEVEQMNLPRLTGPHIPRVIATGDFERPYIVIEFSRSHCDRSA
                     RKLDGAPLSRQRVRPRCGGGALHGECR"
     gene            3574..4119
                     /locus_tag="VIY07_15180"
     CDS             3574..4119
                     /locus_tag="VIY07_15180"
                     /inference="COORDINATES: protein motif:HMM:NF017088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HEY6383135.1"
                     /translation="MLKKLMLTTALSAALATAAFAQTSSPPSSPSDTPAAKTESSSPP
                     AAKSESGKLNFVSSQKPDQWLASKFKGTDVVGSDNEKIGDVSDIMFDKSGKVEAIIIG
                     VGGFLGVGAKEVALAPSSFDVVPGQNGSADKLKLSATKDQLKDAKDFARYEPPRPTTT
                     GAGSGGAGGMKPSGSPPSTSR"
     gene            4269..5039
                     /locus_tag="VIY07_15185"
     CDS             4269..5039
                     /locus_tag="VIY07_15185"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEY6383136.1"
                     /translation="MPAFSPDSFIVADVVPSPNFDERQGGPPDMILLHYTGMKTGESA
                     LQRLTTAESKVSAHYVVFENGRIVQCVPEERRAWHAGESVWAGETDINSRSIGIEIVN
                     PGHEFGYPDFPLRQIAAVISVCKSIITRRGSFPAERILAHSDVAPGRKDDPGEKFPWG
                     LLSESGVGHWVRAAPLDLEGMSLQPGDRGEAVTRMQRSLRSYGYGIADTGHYDEATGK
                     VVTAFQRHFRQARVDGIADASTLLTLRALIETRSAPIS"
     gene            5131..5536
                     /gene="rnpB"
                     /locus_tag="VIY07_15190"
     ncRNA           5131..5536
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VIY07_15190"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(5580..5921)
                     /locus_tag="VIY07_15195"
     CDS             complement(5580..5921)
                     /locus_tag="VIY07_15195"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6383137.1"
                     /translation="MSGLIKAYAATTPQRLKVAPDLPTIAESGLPDFQMVVWYAMYAP
                     KGTPAAVVEKLSAALQKSLDDPDVKDRLARSGAETVAPERARPDVLRAYLKSEIDKWV
                     PIIKKAGVQAQ"
     gene            complement(5962..6549)
                     /locus_tag="VIY07_15200"
     CDS             complement(5962..6549)
                     /locus_tag="VIY07_15200"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6383138.1"
                     /translation="MQRILILLWLGWGLIGTVGAQEFPSRPVTIVVPFSAGGPADIVA
                     RTLAQSMSKVLDQQFIVENTVGAGSTLGAARVAGSPPDGYSILLTHISHVANIAFYPN
                     LRYDPVKDFEPIGLVAESPMALVARKDFPARDFKEFVAHLKANKERMTHGFAGIGSAS
                     HLCSLLFFHAIDTTVNGAPYKGTAPALNDLMGGPP"
     gene            complement(6804..7778)
                     /locus_tag="VIY07_15205"
     CDS             complement(6804..7778)
                     /locus_tag="VIY07_15205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY6383139.1"
                     /translation="MTRTINVLVSACILAGLPGGAFAQTQWDLPTNYAASAFHTKNIV
                     QFAADIEKATAGSLKIVVRPGGEMIKHAEIKRAVSDGKAAVGEVLISLAAEEAPVYGV
                     DSIPFLATGYDGARKLYEAQKPYLEKQLAKEGLVLLFSVPWPPQGVYAKREIQSIGEL
                     QGLKFRTYNAMTRRIAELAGAQPTQIEVPDLPAAFASGRVDIMITSASSGVQSKAEQY
                     LTHYIDTQAWVPRNMVFANKAAIDRLSAAEKKALTEAAGAAEDRGWKLSIEEMTIKTK
                     ALKDAGIIVLSPSAELRSGLAKIGGVIANEWAASAGADGEAMLAAYGK"
     gene            complement(7800..8777)
                     /locus_tag="VIY07_15210"
     CDS             complement(7800..8777)
                     /locus_tag="VIY07_15210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HEY6383140.1"
                     /translation="MIVLRSFVLAAATVAVLASQPASAQTKWNLPAAYPPDNPHSENL
                     ALFAKDVAAATDNKLQITVHAGASLFKAPEIKRAVQTGQAQIGEVLLSLHENEDPIYG
                     IDVIPFLATSYPESMKLWQSSKAAIEKKLASQGLILLFAVPWAPQGIYAKKDLNSVED
                     MKGLKWRAYNVGTARIGELVGAQVVTVQAAELPQALATGVVNSFITSGATGYDSKAWE
                     TMTHFYDTQAWIPKNVIFVNKAAFDTLDKPTQEALRKAAVTAETRGWKMWQDKAGWYL
                     EQLKTHGMKVQPPGDTLKSGLKKIGDQLTADWLKKAGADGEAVIAAYKK"
     gene            complement(8799..>9204)
                     /locus_tag="VIY07_15215"
     CDS             complement(8799..>9204)
                     /locus_tag="VIY07_15215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007758164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6383141.1"
                     /translation="YTGIPVALATWVDSFHLSPYALIAALTVMYMLLGTALDGISMIV
                     LTTAIVVPMIKQAGFDLVWFGIFVVLVVEMAEVSPPVGFNLFVLQTMSGKDSNTVARA
                     SLPFFFLLVLAVAIITAFPDIVMVLPRLAFPG"
BASE COUNT         1824 a         2838 c         2722 g         1820 t
ORIGIN      
        1 tggccgcaaa ggcgacgaca gcaagcccga gtcgcgcctt cgccttcacg ttgcggtcaa
       61 cattatgccc atagagcagc gagcgcagcg cgcggtgcca gcggctttcg attcgcttgc
      121 tagttgcctg catggacgtc accgccttgg cgacacgctg ccggtcgcgt cgagaatcgg
      181 cgacagcatg gccccaatcg gatcaccggg tgtcggggca ggcgtgggcg ggcggtcggg
      241 caagcgatcg aacttatcga actgcgtcgc tttgatcggt tgcaagccaa ggtgcctgtc
      301 ggccaggcct tggattctgc ccggagtatc aagtcgtgcc cattcggccc gcaatgctgc
      361 gatggcgctg cgctcgcggc gcaactcgcc ccgcaacttg gcaacacgct cggcctgaag
      421 cgtggaatcg aacttgattt tgtaaacgaa ggatgccgcc aggatgagcg cgcctatgac
      481 caatatgttc aagagacgca tgggttagcg ccccctcgga acgtcggcca gggacggcaa
      541 cgcgggaacc agtcccgccg gcacggcgac gcgggccggc gcttcggtgc gttcggcagg
      601 acgcaacttc gcggagcggg cacgcggatt gcgcgcgatc tcatcatcgt tggccgtgat
      661 cggccgcttg gccagcattc ggaatgtcgg cgcctggcgg ctgagctcgg gcgcgtgccg
      721 agagccggcg cgaacctgac tccggtcggc gagaaacgtt ttgacgatac gatcttccag
      781 cgagtggaat gagacagcta cgagccgccc gccctttttc agaattcgct ccgcggcctg
      841 cagtcccttg aggagctcgc caagttcgtc gttcacgtag atgcgcagtg cctgaaaggt
      901 gcgcgtcgcc ggatgaattt cgtccgcacg tgagcgcacc accgacgcga cggtttccgc
      961 gagcttgcgc gtcgtctcga tcggcgcgtc ggtgcgcgcc ctgacgatcg cgcgcgcgac
     1021 ggaacgggaa cgccgctctt cgccgagcga aaagataatg tcggccaagg ttcgctcgct
     1081 ggcagaattc acaatatcgg ccgcacttgg gccctccccg cccatgcgca tgtcgagcgg
     1141 tccctccagc cggaaagaga aaccgcgccc ggcagagtcg agctgcatgg aagacacccc
     1201 caggtcgagc acgactccat cgacagcgtc gaatcccgcc tcgcgtgcca gcgcatcgag
     1261 attggagaac cggtcctcaa tgagagtcag acggcctccg gaccgctcga cgagatcagc
     1321 acccagggca atggcggttt gatcgcgatc gatgccgatg accttgcagt cggcggcggc
     1381 caggattgca cgggtataac cgccggcgcc aaacgtggca tcgatgtaga cgcctccgtt
     1441 gcgcggctgc agaaactcga tcgcggcagc gccgagcacg ggaatgtgga gggccggtcc
     1501 gccagcgaca gccgagccgc cgccgcccgc cgtcattccc gtgctccgag cgcgtcgcgc
     1561 gccgctacct gggaccccag ctctcctttg agcgcgcgca ccttttgggt ggcctccgcg
     1621 agctcgctct tgaaacgtcc aggctcccag atctgaaact tgttgccgag accgacaaac
     1681 gccactgttt cggtaattcc cgcatgccgc ttcaggttct cgctcaatac gacgcgcccc
     1741 tcgccgtcga ttttcagcgt ttcgctcgtg ccgtacagcg ccaacgcaaa ctgctcgcgt
     1801 tgatccgaaa acggcgcgta gcgtccgatc aaggcttcga tctccgccat cagcgcattt
     1861 ccgccggcat cgatcgcggg gcgatcgagc gccggatagc aataaagacc ctcgagacca
     1921 tcgcgcgcga gcaccgaccg aaacgggccg ggaattgaga cccgcccctt ggagtccagc
     1981 cgcaacgtga aattcgccac gaagcggtcc atgcacccca ctccacactg gccggacaca
     2041 accaaggacg ctgcccgaac actcacacgg cactgcccgc gcgaccggcc ttgccgccac
     2101 gctgctggtc aaactgtccc gatttgggaa atcgtgggat atcatgggat tatgtggccg
     2161 tcaagaaacc tgggcccaat cctcccgaag cgcagtgtcg cggcagatca ctgccattaa
     2221 cggcggttaa acttaaagaa acgttgccgg atttcggcct tcgccaggca tcgaaactta
     2281 tgtggattgg attactcagc gacatccatg cgaaccggga agcgctcgag gcgaccctcg
     2341 accatgcgcg gcgtgcggga atcagccgct tcgtctttct cggcgattac gtcggatacg
     2401 gcgccgatcc gggctacgtc gtcgacaccg tgatacgcga ggtcgaggcc ggcgccgtgg
     2461 cgctgcttgg caaccatgat gccgcgatcg gcagcggtcc gggcggcatg aattcgatcg
     2521 ccgccgaagc gattgaatgg acacgacctc gcctcgacag cgcccagcgg gaattcctcg
     2581 ctcaactacc gctgaccttc gacgacaaca gccggctgtt cgtacacgca agtgctcatg
     2641 cccccgcgca ctgggaatat gttaccgacg tgccggcagc ctcgcgcagt ttcatggcga
     2701 cgcaggcgca cgccactttc tgtggtcacg tgcacgtgcc ggaacttttc cacctctcgt
     2761 cgactggaaa gattgccggc tttcagcccg tgcaggccgt ggagatcccc ttactcgcaa
     2821 atcgacgctg gcttgccgtg ctcggctcgg tcgggcagcc gcgcgatttc aatcccaccg
     2881 cttgctatgg agccctcgac gtcgagcgaa acgtgctcac ctatgtccga gtcccttacg
     2941 acaacgaaac ggccgcccga aaggtgcgcg aagccggatt gccggcgatc ttgagcgacc
     3001 gattgattgt gggagcctga cgcgtgaacc gtcgcgatct ccaggccgga caaataatcg
     3061 acggttttcg actcgtcgag ccgctcgagt cgggcggaat ggccagcttt tggcgcgtaa
     3121 cacgcgacgg tattgacacg ccgatggtca tgaaaatccc gctgctgcgg cctggcgaag
     3181 atcctctcac catcatcggc tacgaggtcg agcagatgaa cctgccccgc ctcaccgggc
     3241 ctcacattcc acgtgttatt gccaccggtg atttcgagcg cccctacatc gtgatagaat
     3301 tcagtcgatc acattgtgat cggagcgcgc ggaagctcga tggtgcgccg ctatctaggc
     3361 agcgtgtccg cccgcgttgt ggcggaggcg ccttgcacgg tgagtgtcgt tagccggccg
     3421 cgcgaagaaa tcgacgacgc taccgagcgt gttgcggcgc agcggacata gttcggttcc
     3481 aattttcaaa ttccggccac tgttccgtca cgtgggaacg ccgatcatgg ccacgcgttg
     3541 tcgttgcgga ttcgcgatcg agaggaggct taaatgctta agaaattgat gttgacgacg
     3601 gcgttgagcg ccgccctggc gacggctgcg ttcgcgcaaa catccagtcc gccgagttcg
     3661 cccagcgaca cacccgcggc gaaaacggaa tcgtcaagcc caccggccgc aaagtccgag
     3721 tcgggaaaat tgaacttcgt atcctcgcag aagccggatc agtggcttgc gagcaaattc
     3781 aagggcaccg acgttgtcgg ctctgacaat gagaaaatag gcgacgtcag cgatatcatg
     3841 tttgacaaga gcggaaaggt cgaagccatc ataatcggcg ttggcggttt cctgggcgtt
     3901 ggcgcaaagg aagtcgcgct ggccccgagc tctttcgacg tcgttcctgg ccagaatggc
     3961 tcggcggaca aactcaagct ctctgcgacg aaggatcagc tcaaggatgc caaggacttc
     4021 gctcgctatg agccgccgcg cccaacgacc acgggcgcag gcagtggcgg ggcgggcggc
     4081 atgaagccgt cgggcagtcc gccctcgacc agccgctaat tcaggcacag agcaagacct
     4141 cgacaacatg acatggcccc ggcgatagcg ccggggccat gtcaatgctt gcggccttgc
     4201 tttttttttg tggcgcagcg aatgatggcc ttgcaccatc actcttgccc accggttcta
     4261 tccggcccat gcccgccttt tcgccggatt ccttcattgt cgccgacgtc gtgccgtcac
     4321 ctaattttga cgagcgccaa ggcggtccgc cggacatgat cttgttgcat tacaccggga
     4381 tgaagaccgg tgaatcggcg ctgcaacgtc ttaccaccgc tgaaagcaaa gtttcggccc
     4441 actacgtcgt gtttgaaaac ggccgcattg ttcaatgcgt cccggaggaa aggcgtgcat
     4501 ggcacgcggg ggagtccgtg tgggccgggg aaaccgacat caactcccgt tcgatcggta
     4561 tcgaaatcgt gaaccctggc catgagttcg gctatccgga ttttccgttg cggcagatcg
     4621 cggcggtcat ttctgtctgt aaatcaatca ttacacggcg aggctctttc cctgccgagc
     4681 gcattctcgc ccattcggac gtggcccccg ggcgaaagga tgaccccggc gaaaaatttc
     4741 cttggggtct tctgagcgaa tccggagtcg ggcactgggt gcgcgcggcc ccactcgatc
     4801 tcgagggaat gagcctgcaa cccggcgacc ggggcgaggc tgtgacgcgg atgcaacgca
     4861 gtctgcgctc ctacggctac ggtattgcag ataccggcca ctatgacgag gccacgggca
     4921 aggtcgttac cgcatttcag cggcattttc ggcaggcccg cgttgacggc attgccgatg
     4981 cttccaccct cttgacgctg cgggcgctga ttgagacccg ctccgcgccg attagttagg
     5041 cttccacacc gcgcccggtg caggtttctc ttaagcttgc cgccaaggca ggcttgacgg
     5101 cttggcctgg catccccatt cctagtctcg tcagtcggcc ggacggccgc cccgcgccaa
     5161 tgccgaaagg cggccgggga ggaaagtccg ggctccacgg acaaacggtg ccggataacg
     5221 tccggcgggg gtaaaacccc agggacagtg caacagagag cagaccgcct cggcgcgttg
     5281 cgttttagcc agcggcaagg gtgaaacggt gcggtaagag cgcaccgcac ttccggcgac
     5341 ggaagtggca cggcaaaccc caccgggagc aagaccgaat aggaacggcg cgggagcaat
     5401 cccggatcag tccggatcag ccgttcgggt aggttgctgg aagcgccggg caaccggcgt
     5461 gcaagaggaa tggccgtcac gtccgcggct cgtgccgcgg gccatacaga acccggctta
     5521 caggctggct gatacgtcgt aagggggctc ggcgggaaaa ccgccgggcc cccgccaatt
     5581 tattgcgcct gcacgcccgc ttttttgatg atcggaaccc acttgtcgat ttcggatttg
     5641 agataggcgc gcagcacgtc ggggcgcgca cgctccggcg cgaccgtttc ggctccggac
     5701 cgcgccagcc gatccttcac gtccggatca tccagcgact tttgcagcgc tgccgaaagc
     5761 ttctcgacca cagccgcggg cgtccccttc ggcgcataca tcgcgtacca gacaaccatc
     5821 tgaaaatccg gcaacccgga ctcggcaatc gtcggcagat ctggcgccac tttgaggcgc
     5881 tgtggcgttg tggccgcgta agcttttatc aatccactca tcgacggctg caaaatgttg
     5941 agcgtctggt cgcacatgaa atcaaggtgg cccgcccatg aggtcattga gagcgggtgc
     6001 cgtgcctttg tagggcgcgc cgttcacggt cgtgtcgatg gcatgaaaga aaagcagact
     6061 gcacagatgc gatgcggagc cgatcccggc aaatccgtgt gtcatcctct ccttgttggc
     6121 tttcagatga gcgacgaatt ccttgaaatc ccttgcagga aaatccttgc gcgcgaccaa
     6181 tgccatcggc gactcggcaa ccagaccgat cggctcaaaa tccttcaccg ggtcgtagcg
     6241 taaattcgga tagaacgcga tgttggcgac atgactgata tgcgtcagca aaattgaata
     6301 tccgtcgggc ggcgaacccg cgactctcgc cgcgccgagt gtgctgcctg caccgacggt
     6361 gttttcaacg atgaattgct gatcgagaac cttactcatg ctctgcgcga gcgtgcgcgc
     6421 gacgatgtca gccgggccgc cggccgagaa gggcacgacg atcgtcacgg gtctggacgg
     6481 aaattcctgc gcgccgacag ttccgatcaa tccccagcca agccacaaca gaatcaatat
     6541 ccgttgcatc gaactttact ctcaattttt ttgcagtgtt gatgttgccg ccgcgcatat
     6601 agacggtggc caaagcatca gtctagaaaa agcggcggat aatgcgtgaa agtatgccgt
     6661 aagcgacaat cagcagatga atttggcttt atgcgacatg aatgtggcag ccggtgcttc
     6721 ttctttgtcg cgcgcacgat gaccttttag aaccagcaaa tatctttttt gtttttgaac
     6781 gggcaaaccg agcgaattgc tcgtcacttc ccatacgcgg caagcatcgc ttcgccgtcc
     6841 gcgcctgcgg acgctgccca ctcattcgcg atcacgccac caatctttgc caagccggat
     6901 cgaagttccg cgcttggcga aagcacgatg attccggcgt ccttgagcgc tttggttttt
     6961 atcgtcattt cctcgatcga tagcttccag ccacggtctt ctgccgcgcc tgcagcttct
     7021 gtaagcgcct ttttttctgc agcagagagt cggtcaatcg cggccttgtt ggcaaacacc
     7081 atgttgcgcg gcacccaggc ctgggtgtcg atgtaatgcg tcagatattg ttcggctttc
     7141 gactgcacgc cgcttgatgc cgaggtgatc atgatatcga cgcggcccga tgcgaaggcg
     7201 gcggggagat cagggacttc aatttgcgta ggctgcgcgc ctgccagttc ggcaatccgc
     7261 ctggtcattg cgttgtaagt gcggaatttc agtccctgca gttccccgat cgattgaatt
     7321 tcacgtttcg catagacgcc ctgcggcggc cacggaaccg aaaacagaag taccaatcct
     7381 tctttcgcaa gctgtttttc caggtacggt ttttgcgcct catacagctt gcgcgcgccg
     7441 tcatatcctg tggcaaggaa cgggatcgaa tcgacgccat agacaggtgc ttcttccgcg
     7501 gcgagcgaaa tcaacacttc gcccaccgca gcctttccat cgctgaccgc gcgcttgatc
     7561 tcggcgtgct tgatcatttc gccgcccggg cggacaacga tcttcagtga gccagccgtc
     7621 gccttttcaa tgtccgccgc aaactggacg atgttcttgg tgtgaaaggc acttgccgca
     7681 taattggtcg gcaaatccca ttgcgtttgc gcgaaggcac cacccggcag gcccgcgagg
     7741 atgcaggccg aaacaaggac attgatcgtc ctggtcatcg aactcccctt cgaaggagcc
     7801 tacttcttgt acgctgcgat caccgcttcg ccgtcggcac ccgccttctt cagccagtcg
     7861 gcagtcagct ggtcgccgat tttcttcagt ccggatttca atgtgtcccc aggcggctgc
     7921 accttcatgc cgtgcgtttt aagttgctca agataccagc cggccttgtc ttgccacatt
     7981 ttccagccgc gggtttccgc agtgaccgca gctttacgca gggcctcctg cgtcggctta
     8041 tccagcgtat cgaatgccgc tttgttcacg aaaatcacat tcttcgggat ccatgcctgg
     8101 gtgtcgtaga aatgcgtcat cgtctcccac gccttgctgt cgtagccggt tgcccccgaa
     8161 gtgatgaagg aattcacaac accggtggcg agagcttgcg gcagttcagc cgcctgtacc
     8221 gtcacgacct gcgcgccaac cagttctccg atacgcgcgg tgccgacatt gtatgcgcgc
     8281 cacttcagtc ccttcatgtc ttcaacggaa ttcagatcct ttttcgcgta gattccctgg
     8341 ggcgcccacg ggacggcaaa caggaggatc agcccttgtg atgcgagctt cttctcgatc
     8401 gcggctttcg aggattgcca cagcttcatt gattccggat agctggtggc aaggaacgga
     8461 atgacatcga tgccgtaaat gggatcttca ttctcgtgca acgagagcag aacttcgccg
     8521 atctgcgcct gtccagtctg caccgcacgc ttgatttccg gcgccttgaa cagcgaagcg
     8581 ccggcgtgaa cggtgatctg taatttgttg tcggttgcgg cggcgacatc cttggcaaac
     8641 agcgcgaggt tttcactgtg gggattatcc ggcggatacg cggccggcaa attccatttg
     8701 gtctgggctg aagccggttg cgacgctaaa acggcgactg tggctgcagc aagaacgaaa
     8761 cttctgagca cgatcatgga acgcctctct gtcacgagtt acccgggaaa agccaggcgc
     8821 ggtagcacca ttacgatatc aggaaacgcc gtgataatcg ctaccgccaa gacgagcagg
     8881 aagaaaaacg gcagcgacgc ccgggccacc gtgttcgaat cctttccgct cattgtttga
     8941 agcacgaata aattgaaacc cacggggggc gacacctccg ccatttccac tacaagcaca
     9001 acaaaaatcc cgaaccagac gaggtcgaag ccggcctgct tgatcatggg aaccacaatc
     9061 gccgtggtga gcacgatcat tgaaatgccg tcaagggcgg tgcccagcag catgtacatc
     9121 accgtgagcg cggcaatcag cgcgtagggg ctcagatgga agctgtcgac ccaagttgcg
     9181 agcgcgaccg gaattcccgt gtac
//
LOCUS       DATDHO010000783         7987 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_137977, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000783 DATDHO010000000
VERSION     DATDHO010000783.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7987
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_137977"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            198..350
                     /locus_tag="VIY07_15220"
                     /pseudo
     CDS             198..350
                     /locus_tag="VIY07_15220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664785.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
     gene            390..1574
                     /locus_tag="VIY07_15225"
     CDS             390..1574
                     /locus_tag="VIY07_15225"
                     /inference="COORDINATES: protein motif:HMM:TIGR02283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HEY6383142.1"
                     /translation="MSRRSVIALVVLLVLQAHTSRAQDQSFAAFASELWTDAQPKGIT
                     RATFDLALKGVTPDQRVIAATKRQPEYGKPVGDYVNAIVSNRRIADGQLKAREWAKTF
                     DAVEKKFQVERWVLVALWGMESDFGAAKDRWDVFRSLATLGYVKYRHPYFRNELLVAM
                     RIMQDGHIARDKMVSSWAGAMGQTQFMPSNFVDYAIDFSGDGRTDIWGNVPDVLGSTA
                     NYLRKWKWNSALPWGFEVTVPNGFDYMRSRATFADWQVLGVRRADGKPFPSSGQGILF
                     FPSGAAGPGFVVTENFDVLKEYNNSDAYAIAVGHLADRLQGAGVIKTAWPKDDRQISR
                     DARVALQRKLSDMGYKVNEFEGHIDFDLRDNIRAEQKKLGMLPDGHPTYGFLDKLGVK
                     TQ"
     gene            1793..4501
                     /gene="topA"
                     /locus_tag="VIY07_15230"
     CDS             1793..4501
                     /gene="topA"
                     /locus_tag="VIY07_15230"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEY6383143.1"
                     /translation="MNIVVVESPAKAKTINKYLGPGYEVLASFGHIRDLPAKDGSVDP
                     EADFRMLWEVDAKSNQRINDIARKLKDADKLILATDPDREGEAISWHVLEVLKEKNAL
                     KGHAIERVVFNAITKQAVTEALKHPRQIDSSLVDAYRARRALDYLVGFTLSPVLWRKL
                     PGARSAGRVQSVALRLVCDRELEIEKFVAKEYWSIVAKLATPRNEVFEARLVGADGQK
                     IQRLDIGSGAEAEAFTRDLENAIFKVTAVEAKPARRNPPPPFTTSTMQQEASRKLGLA
                     PAMTMRLAQRLYEGVEIDGETTGLITYMRTDGIDLAPEAIADIRAMLGRNYGKEYVPG
                     TPREYHNKSKNAQEAHEAVRPTSASRTPAEVAKYVDRDQARLYELIWNRAVASQMESA
                     ELERTTVDIVAKAGSRNIDLRASGQVVKFDGFLTLYQEGQDETPDDDESRRLPAMSEG
                     ELLNKQAIESSQHFTEPPPRFSEAALVKRMEELGIGRPSTYASILQVLQDRGYVRIDK
                     KRLIPEDKGRVVVAFLESFFTRYVEYDFTASLEEKLDEISAGAIDWRAVLAEFWEQFV
                     GAVNDIKEVRNRVVLDALNDLLEPHIFPERVDGRPRRECAQCGAGQLSLKTGRFGAFI
                     GCSNYPECNFTRQITPNADGVQGKKVLGEDPETGLEVTLRGGRFGPYLQLGEQVKPPK
                     VKKGEKKPEVEKPKRASIPKGISPENIDLEKALGLLALPREIGLSPDDREPIVAGIGR
                     FGPYVKHGKTYANLEEGDDVLTIGLNRAVTLIAEKKANPKKGRRFGADPGRVLGEHPD
                     EGGPVVVKNGRYGPYVSHNGINATIPADKTPEEISLTEAVVLLDARADQLSAQPRRAA
                     GRKKAGEPSEAPKGRKKKAEAADKGEKSASPRKKPAKKAAKVTAAE"
     gene            4570..6837
                     /gene="rnr"
                     /locus_tag="VIY07_15235"
     CDS             4570..6837
                     /gene="rnr"
                     /locus_tag="VIY07_15235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEY6383144.1"
                     /translation="MNKTSKKNPSLPSKADILAFIGNRPGKVGTREIARAFGLKNAMR
                     ADLKRLLRELADEGSIERRRKKLHHAGTLPSTVLADVTSRDSDGDLIATPDEWDEDAH
                     GAAPKIRILAPRKARPGEAAGLGDRVLLRVEEAEDEDGIRYRGHVIRIIDHPKHRVLG
                     IFRQIPHGGGRLEPVDKKMLGRELSIPAGATADAQDGDLIAVETSRGSRLGLPSGRVV
                     ERLGSLKNERAVSLIAIHAHGIPSVFRRETQQEADAARPATLQGREDWRELPFVTIDP
                     PDAKDHDDAVHAEPDTASNNQGGYVVHVAIADVAHYVGPGTALDREALARGNSVYFPD
                     RVVPMLPERISNDLCSLRPREDRPALAVRMVIGADGRKRSHTFHRILMRSAAKLSYQQ
                     AQSAISGRTDEDTETLVEPVLAPLYAAYEAMARARAERQPLDLDLPERKILLKGDGTV
                     DRVITPERLEAHRLIEEFMILANVAAAETLERARVPLIYRVHDEPAMEKVQALREFLA
                     TLDIPFGKGGVLKPEAFNRVLARVKGRDAEQLVNEIVLRTQAQAEYAAENYGHFGLNL
                     RRYAHFTSPIRRYADLIVHRGLIRALKLGHGGLPEASDRKALAEISAQISAAERRAML
                     AERETSDRLIAHFLADRVGASFDGRISGVTRAGLFVKLRDTGADGFVPARTIGDEYFR
                     YDEKGHAMVGARSGESYRLGDPVTVKLVEAAPVAGALRFEILSEGRRSRPFPRPRREE
                     RQHEYRQRGKRRKAR"
     gene            6834..7580
                     /locus_tag="VIY07_15240"
     CDS             6834..7580
                     /locus_tag="VIY07_15240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEY6383145.1"
                     /translation="MTKDLGKLWAERMTMAERDTSFPDSEPRDAATLMLIDRSAHAPK
                     VLLGRRHAGHKFMPGKFVFPGGRIEPLDCLMPSVSELHPDTEKKLLERVAEPAGDFAR
                     AFALAALRETAEETGLLLGVKRDRPPAVPGEIWAEFAKANVYPDLGQIHFIARAITPP
                     RRPRRFDTRFLTADASAIAHTIEGVVGPDSELVELTWVPIEEAARLDMPTITGIVLEE
                     LLARVEAGMARDLPVPFYFMIEKQFFRELL"
     gene            7683..7850
                     /gene="rpmG"
                     /locus_tag="VIY07_15245"
     CDS             7683..7850
                     /gene="rpmG"
                     /locus_tag="VIY07_15245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011454349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEY6383146.1"
                     /translation="MAKAISLKIKLVSSAGTGHYYVTRKNSRTQTDKLKKRKYDPIAK
                     KHVDYTESKIK"
BASE COUNT         1661 a         2438 c         2429 g         1459 t
ORIGIN      
        1 ggtcggcgcg gtttcggaca tatcaacgat attaaaaggt tccatccaat atccgagtag
       61 cggcgggtga cttcggattt ttaatttcaa ccacgcctcg gaagtttccg aagagcttcc
      121 attcgacact cactcagcaa aggcatagcg actgcgaaag cggatttccg caaatggtca
      181 tgtctgcttt acccccgctc atcgcgcttc tcggtcccgc gccaatatcg atcgacgatc
      241 tggtacggct cgcgtgcact tccgccacaa ttgtgcgcgc tgtgctgctc gagctcgaga
      301 ttgcggggcg gatcgaacgg catggtgcag ggttggtatc gctgctgtaa cgtgcgatat
      361 cgactggcct ccaccggaaa acccatccca tgtcacgccg atccgtaatt gcactcgtgg
      421 tgcttctagt attgcaagct cacacatcgc gcgcgcagga ccaatcgttc gcggcttttg
      481 cttccgagct ttggactgat gcgcaaccca aaggaattac ccgcgcgact ttcgatcttg
      541 cgttaaaagg cgtcacgccg gaccagcggg tcattgcggc gacgaagcgc cagccggaat
      601 acggaaaacc ggtcggcgac tatgtgaacg cgatcgtgtc aaaccgtcgc atcgcggacg
      661 gacagcttaa ggcccgcgaa tgggccaaga ctttcgatgc cgtcgaaaag aaattccagg
      721 ttgagcgctg ggtgctggtc gccctgtggg gaatggagtc cgatttcggc gctgcgaagg
      781 atcggtggga cgtgtttcgg tcgctcgcca cgttgggata cgtaaagtac cgccatccct
      841 actttcgaaa cgaactgctg gtcgcgatgc gcatcatgca ggacggccac attgcgcggg
      901 acaagatggt cagctcctgg gccggcgcca tgggtcagac gcagttcatg ccatcgaatt
      961 tcgtcgacta tgccatcgat ttttcgggtg atggacgcac cgatatctgg ggaaatgtgc
     1021 cggacgtgct cggatccacg gccaactacc tgcgcaaatg gaagtggaac tccgccctgc
     1081 cctggggctt tgaggtgacc gtcccgaacg gcttcgatta catgcgcagc cgcgcgacct
     1141 tcgccgattg gcaagtgctt ggtgtacgcc gcgccgacgg aaaaccgttc ccgtcgtccg
     1201 gacaaggaat cctgttcttc ccgagcggtg cggccggccc gggctttgtt gtcactgaga
     1261 atttcgatgt gctgaaggaa tacaacaatt cagatgccta tgcgatcgcg gtgggtcacc
     1321 tcgccgatcg cctgcaaggc gcgggggtga tcaagacggc ctggccgaag gacgatcgcc
     1381 agatatcgcg cgatgcacgc gttgcgctgc aaagaaaatt gtcggacatg ggttacaaag
     1441 tgaacgaatt cgaggggcac attgatttcg atcttcgcga caatattcgt gccgaacaga
     1501 agaaactcgg catgttgccg gacggccatc cgacatacgg ttttctggac aagctgggcg
     1561 tgaagaccca gtgaacgaag ccggcgttgg cgctcccgcc tctctgtagt agcacttggc
     1621 aatcgaaaca atttatagtt gtgtctcttt cgcgccctat ttggctggtg tgacacggct
     1681 tcttaacggg cttatttgac agtaggggtc accttcccca tgttccgggc caacaaacgg
     1741 ccgattccgc cttaagcccc atctgtaccg gcggataacc tattggattt tcatgaatat
     1801 tgtcgtagtc gaatcgccgg ccaaggcgaa gacgattaac aagtacctcg gccctggcta
     1861 tgaggtattg gcttcctttg gccatatccg cgacctcccc gccaaggatg gctcggtgga
     1921 tcccgaggcg gatttccgca tgctctggga ggtcgacgca aagtcgaacc agcgcatcaa
     1981 cgacatcgcg cgaaagctca aggacgccga caagctgatc ctcgcaaccg accctgatcg
     2041 cgagggtgaa gcgatctcct ggcatgtgct ggaagtactg aaggagaaga acgcgctcaa
     2101 gggacacgca atcgagcgcg tggtgttcaa cgcaatcacc aagcaggccg tgacggaggc
     2161 cctgaagcac ccgcggcaga tcgactcttc gctggtcgac gcctatcggg cccgccgcgc
     2221 tctcgactat ctcgtgggat tcaccctctc gcccgtgctt tggcgcaagc tcccgggtgc
     2281 gcgctcggcc ggacgcgtgc agtccgtcgc actccggttg gtctgtgacc gcgagctgga
     2341 aatcgagaaa ttcgtcgcca aggaatactg gtccatcgtc gccaagctcg cgaccccccg
     2401 caacgaagtt tttgaagcgc gtctggtcgg tgcggacgga cagaagatcc agcgcctgga
     2461 catcggctcc ggcgccgaag ccgaagcttt cacgcgggat ctcgagaacg ccatcttcaa
     2521 ggtgaccgca gtcgaggcaa agccggcgcg gcgcaatccg ccgccgccct ttacgacctc
     2581 gaccatgcag caggaagcaa gccgcaagct cggcctcgcc ccggcgatga ccatgcgtct
     2641 tgcgcagcgg ctctacgaag gcgtggagat cgacggcgaa acgaccggct tgatcaccta
     2701 catgcgtacc gacgggatcg acttggcgcc ggaagcgatt gccgacatcc gcgcgatgct
     2761 aggtcgcaac tacgggaaag agtatgttcc cggaaccccg cgcgagtacc acaacaagtc
     2821 gaagaacgcg caggaagcac acgaggccgt gcgtccgacg agcgccagtc gcacgcccgc
     2881 cgaagtcgcc aaatatgtcg atcgcgacca ggcacgactg tacgagctga tctggaaccg
     2941 cgccgtcgcc agccagatgg aatcggccga gctcgagcgc accacggtcg acatcgtcgc
     3001 caaggccggt tcacggaaca tcgatttgcg cgcgtccggc caggtggtga agttcgatgg
     3061 cttcctcacg ctctaccagg aaggccagga cgagacgccc gatgatgacg agtcgcgccg
     3121 cctgcccgct atgtccgagg gcgaactgct caacaagcag gccatcgaat cctcgcagca
     3181 tttcacggag cccccgccgc gcttttcgga agccgccttg gtcaagcgca tggaagaact
     3241 gggcatcggg cggccctcga cttacgcctc gatcctgcag gtgctgcaag atcgcggtta
     3301 tgtccgcatc gacaagaagc gccttatccc cgaagacaag ggccgtgtcg tcgttgcatt
     3361 cctcgaaagc ttcttcacgc gctacgtcga gtacgatttc acggcgagtc tcgaagagaa
     3421 gctcgacgaa atttcggcgg gcgcgatcga ctggcgtgcc gtgctcgccg agttctggga
     3481 gcaatttgtc ggcgccgtca acgacatcaa ggaggtgcgc aatcgggttg tgctcgacgc
     3541 gctcaacgat ttgctcgagc cgcatatttt cccggaacgc gtcgacggca gaccgcggcg
     3601 ggaatgcgcg caatgcggcg ccggtcaact ctctctgaag accgggcgct tcggagcctt
     3661 catcggctgc tcgaattatc cggaatgcaa tttcacgcgg cagatcacgc ccaacgccga
     3721 cggcgtgcag ggtaaaaagg ttctcggcga ggacccagaa accggccttg aagtgacgct
     3781 gcgtggcggc cgcttcgggc catacttgca gcttggcgag caggtcaagc cgccaaaagt
     3841 gaaaaagggc gagaagaagc cggaagtcga gaagccgaag cgtgccagca ttcccaaagg
     3901 catttcgccc gagaacatcg atcttgagaa ggcgctgggc ctcctcgccc tgccacgcga
     3961 aatcggcctg tcccccgacg accgcgagcc catcgtcgcc ggcattggac ggttcggccc
     4021 ttatgtgaag cacggcaaga catatgcgaa tctggaagaa ggcgatgatg ttctgaccat
     4081 cggccttaac cgcgccgtca cgctgatcgc ggaaaaaaag gccaatccga agaagggtcg
     4141 ccgtttcggt gcagaccccg gcagggtttt gggcgagcac cccgacgaag gggggccggt
     4201 tgtggtcaag aatggccgtt acgggcctta cgtgagtcac aacggtatca acgccacgat
     4261 cccggccgac aagaccccgg aggaaatttc gctcactgag gcggtcgtat tgctggatgc
     4321 gcgtgccgat cagctcagcg cacaaccgcg gcgcgcggcc ggacgcaaga aagcgggcga
     4381 gccttccgaa gcgccgaagg gccgcaagaa gaaagccgaa gccgccgata aaggcgagaa
     4441 atccgccagc ccgcggaaaa aaccggcaaa aaaggctgcc aaagtcacgg ccgctgaata
     4501 agtggcgaag ccgcaggccg gccattacat tttattgtgt ggcgccgttt cggcgcagga
     4561 ctgtccattt tgaacaaaac atcgaaaaag aacccttccc tcccatccaa ggccgacata
     4621 ctcgccttca tcggaaacag gcccggcaag gtcggcaccc gtgagatcgc ccgcgccttc
     4681 ggccttaaga atgcaatgcg cgcggatctg aagcgtctgt tgcgcgaact cgcagacgaa
     4741 ggatctatcg aaagacggcg caagaaactg caccatgccg gcacccttcc ctccaccgtt
     4801 ctggccgatg tgacctcgcg ggatagcgac ggcgatctca ttgcgacacc ggacgaatgg
     4861 gatgaggacg cgcatggtgc cgcgcccaaa atacgcattc tcgcgccgcg caaggcccgg
     4921 cctggcgaag ctgccggtct cggcgatcgc gtgctgctcc gcgtcgaaga ggccgaggac
     4981 gaagatggaa tccggtaccg cggccatgtg atcaggatca tcgatcaccc gaagcatcgt
     5041 gtccttggca tttttcgcca gattccgcat ggcggtggac gtttggagcc ggtcgacaag
     5101 aaaatgctcg gccgggagct ctccatcccg gcgggagcaa ccgcggacgc acaagacggc
     5161 gacctcatcg cggtcgagac ctcacgcggt tcgcggcttg gcctgcccag cggtcgcgtc
     5221 gtggagcgcc tcggatcgct caagaacgag cgggcggtga gcctgatagc tatccacgcg
     5281 catggcatcc cctccgtatt tcgccgcgag acccagcagg aagccgacgc cgcccggccc
     5341 gcaacgcttc aagggcgcga ggattggcgc gaactgcctt tcgtcacgat agatccaccc
     5401 gatgccaagg atcacgacga cgcggtgcat gccgagcctg atacggcatc gaacaatcag
     5461 ggcggctacg ttgttcatgt cgccatcgcg gacgtcgccc actacgtcgg gccgggcacc
     5521 gcgctcgacc gcgaggcgct tgcgcgcggc aattcagtct attttccgga ccgcgtggtg
     5581 ccgatgttgc cggaacggat ttcgaatgat ctgtgctcgc ttcgaccccg cgaggaccga
     5641 cccgccctcg ccgtacgaat ggtaatcggc gccgatggac gcaaacgctc gcacaccttc
     5701 caccgcatcc tgatgcggtc ggccgcaaag ctgtcctatc agcaggcgca atccgcgatc
     5761 agcgggcgga ccgatgagga tacggaaacg ttggtcgagc cggtgctcgc gccgctatat
     5821 gccgcttacg aagccatggc gcgcgctcgc gccgagcgac agccgctcga cctcgacctg
     5881 cccgagcgca agattttgct caagggcgat ggcactgttg atcgtgtcat aacacctgag
     5941 cggctcgaag ctcaccgatt gatcgaagag ttcatgattc tggccaacgt cgcggcggcc
     6001 gagacgctcg agcgtgcgcg cgtcccactt atttaccggg tgcacgatga gccggccatg
     6061 gaaaaggtgc aggcgttgcg tgaattcctt gcgacgctcg atatcccctt cggcaaaggc
     6121 ggcgtgctca agcccgaagc gttcaatcgg gttctggcgc gcgtgaaggg tcgcgacgcc
     6181 gagcaactcg tcaacgaaat cgtcttgcgc acgcaggcgc aggccgaata tgcggccgag
     6241 aactacggcc atttcggcct gaacctccgt cgctatgcgc acttcacgtc gccgatccga
     6301 cgctacgccg atctgatcgt gcaccggggc ctgatccggg ctttgaagct cggacacggt
     6361 ggcttgcccg aggcaagcga tcgaaaagcg ttggccgaaa tcagcgcgca gatttccgcc
     6421 gccgaacgcc gcgccatgct ggctgagcgg gaaaccagcg atcggctgat cgcgcatttt
     6481 ctcgccgatc gcgtcggcgc gagctttgac gggcgcatct ccggcgtcac acgcgcgggc
     6541 ctgttcgtga aactgcgcga taccggcgcc gacggcttcg tgcccgctcg cacgatcggt
     6601 gacgaatatt tccgttatga cgaaaagggc cacgccatgg tcggcgctcg ctccggcgag
     6661 agttaccgtc tgggcgatcc cgtaacggtg aagctcgtgg aagcggcgcc ggttgccggc
     6721 gcgctgcgct tcgaaatctt gtcggagggc cgacgtagcc gcccattccc gcggccgcga
     6781 cgcgaagagc gacaacacga ataccgccag cgtggcaagc gacggaaggc gcgatgacga
     6841 aggacctcgg aaaactctgg gccgagcgta tgactatggc ggagcgcgac acgtcctttc
     6901 cggacagcga gccgcgcgac gctgcaacgc ttatgttgat cgatcggtcc gcacacgctc
     6961 ccaaagtgct gcttggccgc cgtcatgccg gacacaaatt catgccgggc aaatttgtct
     7021 ttcccggcgg ccgcatcgag cctctcgact gcctgatgcc ttcggtcagc gagctgcatc
     7081 ccgataccga gaaaaaattg ctggagcggg tcgcggaacc cgctggagac ttcgcgcgcg
     7141 cgtttgctct ggctgcgctc cgcgaaaccg ccgaggaaac cggcctcttg ctcggtgtga
     7201 agcgtgaccg gccgccggcg gtgcccggcg agatctgggc cgagtttgcg aaagcaaatg
     7261 tgtaccccga cttggggcaa attcatttca tcgcgcgcgc gatcacgcct ccgcggcggc
     7321 cgcgccgctt tgatacgcgg tttttgacgg cagacgcgtc cgcgattgcg catacgatcg
     7381 agggcgtcgt ggggccggac tccgaattgg ttgagctcac ctgggtgccc atcgaagaag
     7441 cggcccgtct cgacatgccg acgattacag gcatcgtgct ggaggagctg ttggcgcgcg
     7501 tggaagccgg catggcacgc gaccttcccg ttccctttta cttcatgatt gagaagcaat
     7561 tttttcggga actgttgtag aaatgccgga aatcagggct tttcttgaca tttgcagcat
     7621 cggcgctagt ttccgcgcca aagacgccac cgtctacact ttaaagcata gagggaagtt
     7681 ctatggctaa agccatcagt ctcaagatca aactcgtctc cagcgccggt accggccact
     7741 actacgtgac gcggaaaaac tcgcgcacgc agaccgacaa attgaagaaa agaaaatacg
     7801 atcccattgc gaagaaacac gtcgattaca ccgagtccaa gatcaagtaa tttgcgcggg
     7861 gcctctacga tgcttcgcac gctggttgcc gcgctcctgg tggcggcgct ggcctgtggg
     7921 tccgctaccg cagccgaaaa gcataagctt gcgctgcaga tcagcgacaa cgatccggac
     7981 aaaatga
//
LOCUS       DATDHO010000784         1715 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_138002, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000784 DATDHO010000000
VERSION     DATDHO010000784.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138002"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            169..1542
                     /locus_tag="VIY07_15250"
     CDS             169..1542
                     /locus_tag="VIY07_15250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HEY6383147.1"
                     /translation="MMGRLNHDQGQLFYSFCLEEAVPDDHLVREIAAVLDLAWVHAEL
                     APYYSSTGRPSIDPELMIRMLIIGYVFAIRSERALCRDVQVNFAYRWFCGLSIEDKIP
                     DHSAFSRARNERFRDSDIFRGVFERVVHACIRAGLVGGEGFAVDASLIVADANKQRSI
                     PGSEWSKELDAQAASRAAKEYLATLDDAAFGAASSVTPKFVSPSDPAAQWTGAMRGPA
                     FFAYANNYLIDVKFGVIMDVEASRAIRQAEVGAAKTMIERTEERFDIKPERLAADTAY
                     GSGAHLNWLVKDKKIAPHIPVIDKSKRDDGTFSREDFTFDKERNLYTCPAGKTLTTTG
                     RLVNDGETLLYLASMRHCRSCLLKAQCCPKAPFRRVPRSIYEEARDVARALAKTEAFE
                     RSRHDRKRAEMLFAHLKRILRLGRLRLRGPRGAQFEFTLAAIAQNLRRLAKLVARPPP
                     LPVPAAA"
BASE COUNT          329 a          500 c          543 g          343 t
ORIGIN      
        1 gaggtgccgc aggttgctca cgattgccga tgagctgatc aaatagggac gcggattgct
       61 gcggcgcatg agtccgttgt tggcagattt tgttgcaaaa gtcgttgatg gcttccgcga
      121 acagtgattc ggtcgctgta acgatgcgat tcgctgcgga ggcgcgcgat gatggggcgg
      181 ctcaatcacg accaagggca gctattttat tcattctgtc ttgaagaggc tgttccggac
      241 gatcacttgg ttcgcgagat agctgcggtt ctcgacttgg cgtgggtgca tgctgaactc
      301 gcgccctact attccagcac tggtcggccc tcgattgacc cggagctgat gatccggatg
      361 ctcatcatcg gctacgtgtt cgcgatccgc tcggagcggg cgttgtgccg tgatgtgcaa
      421 gtgaacttcg cctatcgttg gttttgtggg ctctcgatcg aggacaagat cccggatcat
      481 tcggcattct cgcgtgcgcg caatgagcgg ttccgcgaca gtgacatctt ccgcggcgtg
      541 ttcgagcgcg tggtgcacgc ctgcatcagg gctggtctgg tcggtgggga aggttttgcg
      601 gtggatgcca gcctgattgt tgccgatgcc aataagcagc ggtcaattcc cggatcggag
      661 tggagcaaag agcttgacgc gcaagcagcg agccgggccg cgaaggagta tctcgccacc
      721 ctcgacgacg cggccttcgg ggcagccagc agcgtcactc cgaagttcgt gtcgccgtcc
      781 gatccagccg cccaatggac tggcgcgatg cgaggaccag cgtttttcgc ctacgccaac
      841 aactatctga tcgacgtgaa gtttggtgtg atcatggacg ttgaggcatc acgtgccatc
      901 cgccaggctg aagtcggggc ggcgaagacc atgatcgagc gcaccgagga acgcttcgat
      961 atcaagcccg agcggctcgc ggccgataca gcctacggct cgggggcaca cctcaactgg
     1021 ctcgtcaagg acaagaagat cgctccacac ataccggtga tcgacaagtc gaagcgcgac
     1081 gacgggacct tcagtcggga agacttcacg ttcgacaagg agcgcaacct gtacacctgc
     1141 ccggccggca agaccctcac gacgacgggc aggctggtca acgatggcga gacacttctt
     1201 tatttggcca gcatgcgcca ctgccgcagc tgcctgttga aagcgcaatg ctgcccaaag
     1261 gcgcctttcc ggagggtgcc gcgcagcatc tacgaggagg ctcgtgacgt tgctcgggcg
     1321 ctggccaaga ccgaagcatt cgagcgatcg cgtcatgatc gaaaacgcgc tgagatgctg
     1381 tttgcacatc tcaagcgtat cctgcggctc ggccgcctgc gattgcgcgg gccgcgcggt
     1441 gcccagtttg agttcacgct ggcagcgatc gcgcagaacc tccgcaggtt ggccaagctc
     1501 gtcgcccggc cgccaccact gcccgtccca gctgcggcgt gagcgtcagg tagtcgcgtt
     1561 gtcagtcgtt agcgtagtcc cttcaaagcc accgcttcta acggagcgag tggcagccaa
     1621 agtcgcggct cgaaagtggg ccgcaacttt gcgtctctca tcggagactt ctgcaacaaa
     1681 atcggcacgg aagagacctg ccgaccgcgc cgact
//
LOCUS       DATDHO010000785         5335 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_188522, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000785 DATDHO010000000
VERSION     DATDHO010000785.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5335)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5335)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5335
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_188522"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..977
                     /locus_tag="VIY07_15255"
     CDS             <1..977
                     /locus_tag="VIY07_15255"
                     /inference="COORDINATES: protein motif:HMM:NF024545.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEY6383148.1"
                     /translation="INLGMVSKAEIIDPAVADAAFTLKPGQTSAPVKGRFATVLLQVG
                     KIEPGEEKSYEQLAGQIKNEIAESRIKTEIGNLRDKIEDERAAGSTLAEAARKLSLKA
                     TTIDAVDRSGRGPDGNPVAGLPQTPDVVSAAFASDIGADTEALQLPNGGYLYFDVTGV
                     TPSRDRSLDEVKDQVAARWREDEIAKRLQAKADDILGKLKAGGQFAQVANEFGLKVET
                     ASDLQRGRSAGFVPAKVVEAVFRTPKGAAGTAEGDKDSERYVFRVTDVVHPPLDANSS
                     QAKALADTLRNAFSEDVLTQYIVRLENDFGVSINDAALNQVVGGGGQQ"
     gene            986..2503
                     /gene="trpE"
                     /locus_tag="VIY07_15260"
     CDS             986..2503
                     /gene="trpE"
                     /locus_tag="VIY07_15260"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEY6383149.1"
                     /translation="MHIEPSETAFADRYERGEPQVVWTTLVADLETPVSAFLKLGGGK
                     AMSFLLESVEGGAVRGRYSIIGFEPDLIWRANGGKAEINRLARKNSDAFSPCPEPPLQ
                     ALRALLSECRIALPDSLPPMAAGVFGYLGYDMVRQIEELAPPNPDPTGIPDAILVRPT
                     IIVVFDGVKDSITVITPVRPDKELDAKSALARAIERLANVVESLDRPLDKSLTEHEAG
                     PIDVQAKSNTTREEFKAMVRRAKDYIIAGDVFQVVLAQRFEAPFSLPPFSLYRALRRT
                     NPSPYLYFLDFDGFAVAGSSPEILVRVSNDVVTVRPIAGTRHRGATPHEDKALEEELL
                     ADPKERAEHLMLLDLGRNDVGRVAGIDTVKVTDQFFVERYSHVMHIVSNVEGKLARNR
                     DALDALSAGFPAGTVSGAPKVRAMQIIDELEKEKRGLYAGCVGYFSAGGEMDTCIVLR
                     TALIKDGTMYVQAGAGIVADSDPDFEQQECINKAKALFRAAEEARRFASAARRGQ"
     gene            2572..3156
                     /locus_tag="VIY07_15265"
                     /pseudo
     CDS             2572..3156
                     /locus_tag="VIY07_15265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920992.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
     gene            3218..4249
                     /gene="trpD"
                     /locus_tag="VIY07_15270"
     CDS             3218..4249
                     /gene="trpD"
                     /locus_tag="VIY07_15270"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEY6383150.1"
                     /translation="MADDFKALIAKVATGATLTREEAAAAFDRMMSGEATPSQMGGLL
                     MALRVRGETVDEITGAVTTMRSKMLGVKAPPGAIDVVGTGGDASGSFNISTCAAFIVA
                     GADVPVAKHGNRALSSKSGAADVLQALGVKIDLDANHVGTCIRDAGIGFMFAPAHHPA
                     MKNVGPTRVELGTRTIFNLLGPLSNPAGVKRQMIGTFSRHWVEPMAQVLKNLGSESIW
                     VVHGSDGLDEITTAGSTSVAALENGKIRSFEVTPEDAGLSRGKPEALRGGDAGQNAEA
                     LLDVLKGKRGPFRDVAVLNAAAALIVAGKAKDLKQGAALAVKSIESGEAEGRLDRLIA
                     VSNAGENRT"
     gene            4246..5061
                     /gene="trpC"
                     /locus_tag="VIY07_15275"
     CDS             4246..5061
                     /gene="trpC"
                     /locus_tag="VIY07_15275"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEY6383151.1"
                     /translation="MTDILAKIEAYKREEIAAAKRARPLASLEKDAKASSPLRGFLGA
                     IEQRIAGGEYALIAEIKKASPSKGLIRAEFDPPGLARAYAAGGATCLSVLTDAPSFQG
                     KPEFLAAARNATALPVLRKDFIYEPYQVVESRVLGADCILIIMAAVNDDAAVEIECAA
                     LAYGMDVLVEVHDEVELDRALRLKSRLIGINNRDLRTFQTSLAVSERLAPKIPPDRIL
                     IAESGLTTPADLARLQRVGISTFLIGESLMRQSDVTAATKALLARNQQRAAAK"
     gene            5195..>5335
                     /locus_tag="VIY07_15280"
     CDS             5195..>5335
                     /locus_tag="VIY07_15280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEY6383152.1"
                     /translation="MNQRGEARMVDVTQKGATERVAVAEGRVIMRKETLDVVLEGNAM
                     KGD"
BASE COUNT         1101 a         1597 c         1663 g          974 t
ORIGIN      
        1 atatcaatct cggaatggtc tccaaggccg agatcatcga tccggcggtt gccgacgccg
       61 catttacgct gaagcccggc caaacaagcg caccggtgaa agggcggttc gccacggtgt
      121 tgttgcaggt cggcaagatc gaaccgggcg aggaaaaatc ttacgagcag ctggccgggc
      181 aaatcaaaaa cgaaatcgcc gaaagtcgca tcaagaccga gatcggaaac ctccgtgaca
      241 agatcgagga cgagcgggcc gccggctcca ccctggcgga agccgccaga aaactcagtc
      301 tcaaggccac gacgatcgac gcggtcgaca gatccggccg cggacctgac ggcaatccgg
      361 tggcgggatt gccgcagacg ccggatgtcg tcagcgccgc gttcgcaagc gatatagggg
      421 ccgatacgga ggcgctgcag ttgccgaacg gcggctacct ttatttcgat gtgaccggcg
      481 tgactccgtc gcgcgatcgt tcgctcgacg aggtaaagga tcaggttgcc gcgcgctggc
      541 gcgaggacga gatcgccaag cggttgcagg cgaaagccga cgacattctc ggcaagctaa
      601 aggcgggcgg tcagtttgca caggttgcga acgaattcgg acttaaggtg gagacggcga
      661 gcgatttgca acgcgggaga tcggccggtt ttgtgcctgc gaaggtggtc gaagctgtgt
      721 tccgcacacc gaagggtgcg gccggcaccg ctgaaggcga taaggactca gagcgctatg
      781 tgtttcgcgt gacggatgtc gtgcatcccc cgctggacgc caactcatcg caagccaagg
      841 cactcgcgga cacgctgcga aatgctttta gcgaagatgt cctcacccaa tacatcgtgc
      901 gcctggaaaa tgatttcggt gtttcgatca acgacgcggc attgaaccaa gttgtcggcg
      961 gcggcggtca gcagtagtta cctcaatgca cattgagccg tcggaaaccg cgtttgccga
     1021 tcgctatgaa cgcggcgagc cgcaggtggt gtggaccacc ctcgtcgcgg accttgagac
     1081 gcctgtctcg gctttcctca aactcggcgg cggcaaagca atgagctttc tgctcgagtc
     1141 ggttgaaggc ggagccgtac gcgggcgcta ttcgatcatc gggtttgagc cggacctgat
     1201 ctggcgtgca aacggcggca aggctgaaat caatcgactt gcccgcaaga acagcgatgc
     1261 gttttcgcct tgccctgaac cgccgttgca ggccttgcgc gcactcttat cggaatgccg
     1321 gatcgcactc cccgatagtc tgcccccgat ggccgctggc gtgttcggct atctcggata
     1381 cgacatggtg cgccagattg aggaattggc gccgccaaat ccggatccga ccggcattcc
     1441 cgatgcgatc ctggtccgac ccacgatcat agtcgttttc gacggggtaa aagattcgat
     1501 cacggtcatt actcccgtgc gcccggacaa agagcttgac gcgaagtccg ctctcgcgcg
     1561 cgcaatcgag cgtctcgcca acgtcgtcga aagcctcgat cggccgctcg acaagtctct
     1621 gaccgaacac gaggccggtc ccatcgacgt acaggcgaaa tcgaacacca cgcgcgagga
     1681 attcaaggcg atggtgcggc gcgcaaagga ctacattatc gccggcgatg tctttcaggt
     1741 cgtgctggcg caacgtttcg aggcgccgtt cagcctgccg ccattctcgc tttatcgcgc
     1801 gttgagacgc accaatccgt cgccctatct ctattttctt gattttgacg ggttcgcggt
     1861 cgccgggtcg agcccggaaa tccttgtgag ggtgtccaat gacgtcgtca ctgtccgccc
     1921 aatcgccggc acgcgacatc gcggcgccac gccgcacgaa gacaaagcgc ttgaagagga
     1981 actcctcgcc gatccgaagg aacgtgccga gcatctgatg ctgctggatc tcggccgcaa
     2041 cgacgtgggc cgcgtcgctg gcatcgatac ggtcaaggtc acggaccaat tcttcgtcga
     2101 gcgctacagc cacgtgatgc acatcgtgtc caatgtcgag ggcaagctgg cacgcaatcg
     2161 agacgcactc gatgcgctgt cggcaggatt tccagcgggg accgtgtcgg gcgcgcccaa
     2221 agtgcgcgcg atgcaaatta ttgacgaact ggagaaggaa aagcgtggac tctacgcggg
     2281 ctgcgtcggt tatttctccg ccggaggaga gatggatacg tgcatcgtct tgcgaacggc
     2341 cctgatcaag gacggcacaa tgtacgtcca ggccggtgcc ggcattgtcg ccgacagcga
     2401 ccccgatttt gagcagcagg aatgcatcaa caaggcgaaa gccttgtttc gcgcggcgga
     2461 ggaagctcgc cgcttcgcca gcgcggccag gcgcggtcag taaccagcgc aaaagccggc
     2521 tgcttgaccc ccttgggggg gcaccgtaaa cccttggcaa agcggtggaa catgattgtc
     2581 ctgatcgaca actacgacag cttcaccttc aacctcttcc actatctggg agggctgggg
     2641 gcggacgtgg tcgtccatcg caacaacaag atttcggtcg gcgacgtcat ggcgctggag
     2701 cccgatgcga tcgttctctc gcccggcccc tgcacgccca acgaatccgg catttgcctg
     2761 gatctcatcg gcaaagcgtc cgccagcatt ccaatcctcg gggtatgcct cggccaccag
     2821 gccatcggga aagccttcgg cggaaaagtc gtgcggacaa ctcccctgca cgggaagctt
     2881 tcggaagtca ggcatgccgg gaccggggta tttcgcggca tcaatggatc tctgaaggca
     2941 acacgctacc attcgctggt ggtggagcgc gccagtatgc cgcgtgatct gacagtcaac
     3001 gcggaaagta gcgatgccct tgtgatgggg atcatgcatt gcaacttgcc ggtccacggc
     3061 gttcagtttc atcccgaaag cattgcctcc gagcacggcc gcctgatgct caaaaacttt
     3121 cttgatattg ctgcaacgtg gaacgcgcgg cgcgggccgc gcggcgcgcc tgcgcgcgcg
     3181 ccttccactc tccatttggc gactgaaggg gccgctcgtg gccgacgact tcaaagcgct
     3241 catcgccaag gttgcgaccg gcgcaaccct gacccgcgag gaagcagccg ctgcttttga
     3301 ccgcatgatg tcgggcgagg cgacgccatc gcagatgggc ggacttctga tggcactgcg
     3361 cgtgcgcgga gaaaccgtgg atgagattac aggcgcggtc accacgatgc gcagcaagat
     3421 gctgggcgtt aaagcacccc ctggcgctat cgatgtggtc ggtaccggcg gcgacgcctc
     3481 tggctcgttc aacatctcga cctgcgcggc gttcatcgtt gccggcgcag acgttccggt
     3541 cgccaagcat ggaaaccggg cactttcctc gaaatcaggc gccgctgacg tcttgcaggc
     3601 gcttggtgtc aagattgatc tcgatgcaaa ccacgtggga acgtgcatcc gggatgcggg
     3661 cattggcttc atgttcgccc ccgcacatca cccggcgatg aagaacgtcg ggcctacccg
     3721 tgtcgagctc ggcacgcgca ccatcttcaa tctgctggga ccgctctcca atcccgccgg
     3781 cgtcaagcgc cagatgatcg gcactttctc aaggcactgg gtggagccga tggcgcaagt
     3841 gctgaaaaac ctgggctccg aaagcatctg ggtcgtgcac gggtctgatg gtctcgatga
     3901 aataaccacc gcgggctcga ccagcgttgc cgcgcttgaa aatggtaaaa tccgttcatt
     3961 cgaggtgacg ccggaagacg ccggcttgtc gcggggaaaa cccgaagctt tgcggggcgg
     4021 cgacgccggg cagaacgccg aggccttgct tgatgttttg aaaggcaagc gcgggccttt
     4081 ccgcgatgtc gcggtcctca acgccgcggc agcgctgatc gtggccggaa aggcaaagga
     4141 cctcaagcaa ggcgctgcac tggcggtaaa atcgatcgag agcggcgagg ctgaaggccg
     4201 cctggatcga ttgatcgcag tatcgaatgc cggggagaac cgcacgtgac ggatatcctg
     4261 gcaaaaatcg aagcgtacaa gcgcgaagag attgcggcag ccaagcgcgc gcgtcccctc
     4321 gcttcgctgg aaaaggacgc gaaagcatcg tctccgctgc gcggattcct gggcgcaatt
     4381 gagcagcgga tcgccggcgg cgagtacgcg ttgatcgccg aaatcaaaaa ggcgagccct
     4441 tcaaagggat tgatccgcgc tgaattcgat ccgcccgggc ttgccagggc ctatgcggcc
     4501 ggcggagcga cctgcctttc ggtgctgacc gatgcgccct cctttcaagg caagccggag
     4561 tttctcgcag cggctcgcaa cgcgactgcc ctgccagtct tgcgaaaaga cttcatctac
     4621 gagccctatc aggttgttga gtcccgcgtc ctcggtgccg actgcattct catcattatg
     4681 gccgccgtga atgacgacgc ggcggtcgag attgagtgtg ctgccctggc gtatggaatg
     4741 gatgtcctgg ttgaagttca tgatgaggtt gaactcgatc gtgcgctcag gctgaaatca
     4801 cggctgatcg gcatcaataa tcgcgatctg cggaccttcc agacatccct tgctgtgagc
     4861 gaacgcctgg cgccgaagat accgccggat cggatcctca tcgccgaaag cgggctcact
     4921 acccccgccg acctcgcgcg tctgcagcgc gtcggcatct caactttcct gattggcgaa
     4981 agcctgatgc ggcaatcgga cgtaacggcc gcgacaaagg cgctgctggc gcgcaatcaa
     5041 cagcgcgcag cggcgaagta agacgatggc aggacgcaag aagatctcac cgagcacaaa
     5101 aaggcgggcg tctcatcgtc cggaacgcgc atcaaaggtc gtctcgcgat cggagcaacc
     5161 tgttacgccg ccgcccgtaa gcccccttac ccatatcaat cagcgtggcg aagctcgcat
     5221 ggtcgacgtg acccaaaagg gcgcgaccga gcgcgtcgcg gttgccgaag gccgcgtgat
     5281 catgcgcaag gaaacgcttg acgttgtgct ggaaggcaat gccatgaaag gcgac
//
LOCUS       DATDHO010000786         8177 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_336558, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000786 DATDHO010000000
VERSION     DATDHO010000786.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8177)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8177)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8177
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336558"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..537)
                     /locus_tag="VIY07_15285"
     CDS             complement(139..537)
                     /locus_tag="VIY07_15285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009758979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383153.1"
                     /translation="MGALPHSFKRIRLNLARSKEFPQGSRRHGYEFVAPLDASGHIDA
                     ALWEQHRHACRVRRFWEGEPDEHGFLVHRPGGPEHQRWVFDYDATAEDDDESGYRFGA
                     HAFRPGEYVSIRSEEGEMHTFQVATVEPVS"
     gene            667..2190
                     /locus_tag="VIY07_15290"
     CDS             667..2190
                     /locus_tag="VIY07_15290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEY6383154.1"
                     /translation="MTSEASQQPVIDFLSDPANHGGASVKRIDTHIASVFLVGERALK
                     IKRAVRFPFLDFSTLKARRMACEAEIAVNRAFAPSLYRRVLAITREINGYLALGGKGE
                     PVEWAVEMRRFDESQTCDHLADAGRLNETLADALGRAVAAAHRVAPTVTNSHFTEALA
                     EIIEQNEAELASEPSVSLQDLRALAASAQAALERVKPLLLARERASLVRRCHGDLHLG
                     NIVLIDGKPVLFDAIEFDDRIATGDVLYDLAFLLMDLIERDLHQAANIVLNRYLADTQ
                     RIYDLDALAALPLFMSTRAAIRAKVTAARLRQTGSQAELTHGPRDYAALAQKLLLPGK
                     PRLVAIGGLSGTGKSLLARALAPRFHPLPGAVVLRSDVERKALLGAAETDELPESAYT
                     TDATAKVYAALAEKARRAVSAGHSVIVDAVFARQGERAEIAKIAPDAFEGIFLTAKIE
                     TRLARVSSRSGDASDADAITARRQEEFDLGNIKWAKVDASDTPEETLIRAEAMLEQR"
     gene            2299..3507
                     /locus_tag="VIY07_15295"
     CDS             2299..3507
                     /locus_tag="VIY07_15295"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383155.1"
                     /translation="MTSARARDSFALRLAAGIAGYCAFINLYSPQSILPLLSTEFGVG
                     AAEISTTITVSTLAVALTAPFTGTVADVLGRKRVIVAAMFVLVIPTVMVSLSTSLSAL
                     IFWRAVQGLVLPPIFAVMVAYIGDELSRHEATTVAGIYSSGASLGGFSGRLFVGVLAD
                     LISWRAGFMALAAIAFAGAIVVAFLLPHERKFVRSEGLVASGKQMLAHLRNGQLLATY
                     AVGFGVLFNFITTFTYVSFYLAAPPFNLSASWLGAIFVVYLTGSLLTPWTGWAVARFG
                     RRRFTVRVIAVWGVGIALTLAPSLPLIVAGLAVCAGCGLICQAISTGYVTVTAKAGRS
                     SAVGLYVTSFYVGGSFGAALGGLAWNFGGWPACVALVAVMLVILAAIVFFGWSRRVPA
                     EPGIPPIEPP"
     gene            complement(3511..4116)
                     /locus_tag="VIY07_15300"
     CDS             complement(3511..4116)
                     /locus_tag="VIY07_15300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383156.1"
                     /translation="MPLPNRVSPFGKLFASPGRGTLMGNRGGRLHDAQRKLTARRWVN
                     RAWICCRLEFKDRHRDVWSDSYTELFFLDEVTAFAAGHRPCFECRRKDAEQFAILFSG
                     KKKRARAAAMDHTLHAERLYGKGKRVHRLAIDALPDGAMIALHGEALAVRGEKLLLWS
                     PSGYSPPRPRPHGVEVDVLTPPSMLTVLERGYRPLWHSSAR"
     gene            complement(4126..4440)
                     /locus_tag="VIY07_15305"
     CDS             complement(4126..4440)
                     /locus_tag="VIY07_15305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HEY6383157.1"
                     /translation="MNADLGPYGVWIAIAAMAVVTYAIRAGGFWLMGYVPLTQRVRSI
                     LNALPGSVIAAIIVPLAVRGGTAATAAVVTALVVMAFRRNDLLAVVCGIGAAVLVRGF
                     SL"
     gene            complement(4437..5156)
                     /locus_tag="VIY07_15310"
     CDS             complement(4437..5156)
                     /locus_tag="VIY07_15310"
                     /inference="COORDINATES: protein motif:HMM:NF015549.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEY6383158.1"
                     /translation="MPSPNRPSDKPGWSGFVLGLRQGLPVTPGIMAFGLVVGAAAARQ
                     GLSFFQSLAMNFFVCSGIAQLVALEIWPSVLTWGAVVTVALLAAVIGARLFLMSVAMR
                     PWLGQRPAWQAYAALFFLTDASWLIAMRYRAEGGGDIAVYFGAATVIMAGWLASAAVG
                     YFLGGFIVDPARYGLDLVMPAFFAAMLVPLWAGARRASGWVVAGLVAVVVERLVPGWW
                     FIIAGSITGAVAGGYFDERDE"
     gene            complement(5278..7203)
                     /gene="ftsH"
                     /locus_tag="VIY07_15315"
     CDS             complement(5278..7203)
                     /gene="ftsH"
                     /locus_tag="VIY07_15315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEY6383159.1"
                     /translation="MNANLRNFALWVIIVLLLLALFTLFQNPGQRTTAQDISFSQLLS
                     EVDQGRVRDVVIQGPEIHGTFANGTSFQTYAPSDPGLVQKLYSKGVTITARPPQDNVP
                     WFVSLLVSWLPFIALIGVWIFLSRQMQGAGGKALGFGKSRAKLLAEAHGRVTFEDVAG
                     VDEAKQDLQEIVEFLRDPGKFQRLGGRIPRGVLLVGPPGTGKTLIARAVAGEANVPFF
                     TISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDERE
                     QTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVVGRESI
                     LKVHVRKVPLAPDVNLKTIARGTPGFSGADLMNLVNEAALMAARRNKRMVTQAEFEDA
                     KDKVMMGAERKSLVMTEEEKLLTAYHEGGHAIVAINVKATDPVHKATIIPRGRALGMV
                     MQLPERDKLSMSREQMTSRLAIMMGGRVAEEMVFGKEKVTSGAASDIEQATKLARMMV
                     TRWGLSDELGTVAYGENQDEVFLGYQVSRQQNISEETSRKIDGEIRRLVEAGYAEATQ
                     ILAEKRADLEVLAKGLLEFETLTGDEITDLLAGKRPVRESVIEPSTPRSSAVPPAGKP
                     RPRPEPPSGEVAPQPQA"
     gene            complement(7339..>8177)
                     /gene="tilS"
                     /locus_tag="VIY07_15320"
     CDS             complement(7339..>8177)
                     /gene="tilS"
                     /locus_tag="VIY07_15320"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEY6383160.1"
                     /translation="HRTLRWSGRKPPTGLQEAARLARYRLLHDAARKAGATHIVTAHT
                     LDDQAETVLIRMSRGSGLTGLGAMQKISVVPGGDLEKAALGNDIYLARPLLDVPKARL
                     IATLRAAKIGYADDPSNRDPRFTRARLRVLMGALAEEGLDPHRLALLAHRIKRADRAI
                     EAAVDRAMGDLAVELRPSALAFEVRRFVDLPGEVALRVLGRALAMAGDEGPVELGKLE
                     ALKSALDCAQTAGNGRFRRTLAGAVVTLTGRQLTVERAPPRSRKLLTKRGHGAARPAE
                     TR"
BASE COUNT         1539 a         2602 c         2474 g         1562 t
ORIGIN      
        1 atgtgcggtg gtcaatgagc actgagcttc tcccttggaa aatcccgtct ggtcagacgg
       61 gtcaggcgcg cactctccgg gcaagatgat tgccggtcaa tagacccatg cgccctcaag
      121 gtgcgattac gccaactgtc acgaaacggg ttcgacggtc gcaacctgga aggtatgcat
      181 ctcgccttcc tcgctgcgaa tggagacata ttcacccggg cggaatgcgt gcgcaccaaa
      241 ccggtagccg ctttcatcat cgtcttccgc cgtcgcatcg tagtcgaata cccaacgttg
      301 gtgctctggt cctccaggtc gatggacaag gaagccgtgc tcatccggtt cgccctccca
      361 gaatcgtcgg acgcggcagg catggcggtg ctgctcccag agcgccgcat cgatgtgacc
      421 gctcgcgtcg agcggagcca cgaattcgta gccgtgtcgc cgggaccctt gggggaactc
      481 cttggaacgg gcgagattga gcctgatgcg cttgaacgaa tgtggaaggg cgcccacggc
      541 ctggcctcct tgcacatgag aatgctgacc catcaggccg ccgtcgggca aggctgtcgt
      601 tgatctggat cacgggttca aaaatagcct atgtggttat ggcgctggca tgaaaggcac
      661 gatgcgatga ccagtgaggc ctcgcagcag ccggtgatcg actttctgag cgatcccgcg
      721 aaccacggcg gcgcatcagt caagcgaatc gacacgcata ttgcttcggt ctttctggtc
      781 ggagagcggg cactgaaaat caagcgcgcg gtccgctttc cctttctcga tttttccacg
      841 ctcaaggcac gcaggatggc ttgcgaagcg gagattgcgg tcaaccgcgc tttcgcgcct
      901 tcactctatc ggcgggtgtt ggccatcacg cgggagatta atggatatct cgcgctcggt
      961 ggcaaaggcg aaccggtgga atgggctgtc gaaatgcgtc ggttcgacga gagccagacg
     1021 tgcgatcatc tggccgatgc tggtcgcctc aatgagacgc ttgccgatgc acttgggcgc
     1081 gcggtagccg cggcacatcg cgtcgcaccc acagtcacaa attcccattt caccgaagcc
     1141 ctcgccgaaa ttatcgaaca gaacgaggcg gaactggcat ctgagccttc ggtttccttg
     1201 caggacctgc gcgcgctggc cgcttccgcc caggccgcat tggaacgcgt gaagcctttg
     1261 ctgctcgcgc gcgagcgcgc cagtttggtg cggcggtgtc acggcgacct gcaccttggc
     1321 aacattgtac tcatcgatgg aaagcctgtg cttttcgacg ccatcgaatt cgatgatcgc
     1381 attgccaccg gtgacgttct gtacgatctc gctttcctgt tgatggacct gatcgagcgc
     1441 gacctacatc aggcagccaa tattgtgctc aatcgttatt tggcggatac gcagcggatc
     1501 tacgatcttg atgcattggc agcgctgcct ctgttcatgt ccacgcgcgc ggcaatccgc
     1561 gccaaggtta ccgccgcacg gctcaggcaa accggatcgc aggctgagct tacccacggg
     1621 ccgcgggatt atgctgcgtt ggcgcaaaaa ctcttgctgc caggaaagcc ccggctggtt
     1681 gcgatcggcg gactatccgg cacagggaag tcgttgctcg cgcgcgcgct ggcgccccgc
     1741 tttcatccat tgccgggcgc tgtggtgcta cgcagcgatg tcgagcgcaa ggcgctgctt
     1801 ggcgcggctg aaaccgacga actgcctgaa tccgcctaca ccacggacgc taccgccaaa
     1861 gtgtatgcag cgcttgccga aaaggcgcgg cgcgcggtgt cggccggcca ttcggtcatc
     1921 gtggatgccg tgttcgccag acagggtgag cgtgctgaga tcgcaaagat cgcaccagat
     1981 gcattcgagg gcatctttct gactgcgaaa atcgaaacgc gcctcgcccg cgtgagcagt
     2041 cgttcgggcg acgcttcgga cgcggacgca atcactgcgc gcaggcagga agaattcgac
     2101 ctcggcaaca tcaaatgggc aaaggtggac gcgtccgata cgcccgagga aacactcatc
     2161 cgcgccgagg cgatgctgga gcaacggtag ccagctatgc gaacggcgag ccgcaggccc
     2221 gccgcgtatt cccgtgacat ccggtgcaaa acagatgcat agcttgcttg agacattgcg
     2281 cccccgggtt ttcgacgaat gaccagcgcg agagcacgag attcctttgc cttgcggctg
     2341 gctgccggga tcgcgggcta ctgtgccttc atcaatctct actcgccgca atccattctg
     2401 ccgctcttgt cgaccgaatt cggcgtgggc gccgctgaaa tttcgaccac cataaccgta
     2461 agcacattgg cggtggcgtt gaccgctcct ttcacgggca cagttgccga cgtgctcggc
     2521 cgcaaacgag tcattgtcgc ggcgatgttc gtcctggtca ttccgaccgt gatggtgagt
     2581 ctctcgacca gcctttccgc ccttattttt tggcgcgccg tgcaggggct ggtgctgccg
     2641 ccgattttcg cagtgatggt ggcctatatc ggcgatgaac tgtcgcgtca cgaagctacg
     2701 actgtcgccg gaatctactc gtcaggcgcc agcctcggcg gattcagcgg ccggcttttc
     2761 gtcggcgtgc ttgcagattt gatcagctgg cgcgcgggct tcatggctct cgcagcaatc
     2821 gcctttgccg gcgcgatcgt agttgcgttt ctcttgccgc acgagcgcaa gtttgtgcgc
     2881 tccgaaggac tggtcgcttc gggcaaacag atgctcgccc atttgcgaaa cgggcaactg
     2941 cttgcgacct atgcggtcgg cttcggagtt ctgttcaatt tcattacaac cttcacttat
     3001 gtcagctttt atctggccgc gccgcccttc aatctgtcgg caagctggct cggcgcgatt
     3061 ttcgtggtct atctgactgg ctcgctgctc acgccgtgga ccggctgggc agtcgcccga
     3121 ttcggacgac ggcgcttcac ggtgcgggtc atcgccgttt ggggcgtagg aattgcgttg
     3181 acgctggcgc cttcactgcc actgatcgtc gcgggactcg ccgtgtgcgc gggctgcggc
     3241 ctgatatgcc aggccatttc gaccggatat gtcaccgtca ccgccaaggc cggccgatcc
     3301 tctgcggtgg gtctctatgt cacgtccttc tacgtcggtg gcagcttcgg cgcggcgctt
     3361 ggcggtctcg cctggaattt cggtggatgg ccggcctgcg tggcgctggt ggcagtgatg
     3421 ctggtcatcc ttgccgccat tgtattcttc ggctggagca ggcgcgttcc ggccgagccg
     3481 ggcattcccc caattgagcc gccttgagat ttagcgcgcg ctcgaatgcc aaagcggcct
     3541 gtagccgcgc tcaagcacag tgagcatcga cggcggcgtg agcacgtcga cttcgacgcc
     3601 gtgcgggcgt ggccttggcg gcgaatagcc tgagggactc cacagcaaaa gcttttcgcc
     3661 tcgcacagcc aatgcttcgc catgaagcgc gatcatcgcg ccatccggca atgcgtcgat
     3721 cgccaatcga tgaacgcgct tgcccttgcc gtacagccgc tcggcgtgga gggtatgatc
     3781 catggctgca gccctggcgc gtttcttctt gccggagaac aaaattgcaa actgttcggc
     3841 atcttttcgg cggcactcga agcaaggccg atgacctgcc gcgaacgccg taacctcgtc
     3901 gagaaaaaac aattccgtat agctatcgct ccagacgtcg cgatgccggt ccttgaactc
     3961 gagcctgcag cagatccagg cccggttgac ccaacggcgc gctgtgagct ttcgctgcgc
     4021 atcatgcagc cgcccgccgc gattacccat caaggtacct cggcctggcg acgcaaacag
     4081 ctttccaaac ggcgacacgc ggtttggcag cggcattgca gctcctcaaa gtgaaaatcc
     4141 acgcactaat actgcagcgc cgattccgca aacgaccgcc agaagatcgt ttcgacggaa
     4201 cgccatcacc acaagcgcgg tgacgactgc agcagtcgca gcggtaccgc cgcgcacggc
     4261 aagcggcacg atgatcgctg caataaccga tcccggaagc gcattgagga tgctgcgcac
     4321 ccgttgagtc aaaggaacat agcccatcag ccagaacccg cccgcccgga tggcataggt
     4381 caccaccgcc attgctgcga tggctatcca gaccccgtac ggacccaggt cggcgttcat
     4441 tcgtcccgct cgtcgaaata gccgcccgca acagccccgg tgatcgagcc cgcgatgatg
     4501 aaccaccagc ccggtacgag gcgttcgaca acgacggcga cgagccccgc gaccacccaa
     4561 ccggaagcac ggcgcgcacc ggcccacagc ggcaccagca ttgcggcgaa aaatgccggc
     4621 atcacaagat cgagcccgta tcgcgccgga tcgacaatga acccgccgag gaaatatccg
     4681 acggccgcgg acgcaagcca gcctgccatg atcactgtgg ccgcaccgaa atagacggcg
     4741 atatccccgc cgccttccgc gcgatagcgc atggcgatca accagctcgc atccgtgagg
     4801 aaaaagagcg ccgcataggc ctgccacgca ggccgttgcc cgagccaggg acgcatggcg
     4861 acactcatca gaaagaggcg cgcaccgatg acggccgcaa gcaaagcgac cgtcacgaca
     4921 gcgccccagg tcagaacgct tggccagatt tccagggcga cgagctgggc gattccggaa
     4981 caaacgaaaa aattcatcgc caggctttgg aaaaacgaga gaccttgccg ggccgcagcg
     5041 gcgccgacaa cgagcccgaa tgccatgatg cccggcgtga ccggaagccc ctgtcgtaat
     5101 cccagaacga aacccgacca gccaggtttg tccgacggtc gatttggtga aggcatggcg
     5161 aaccggggct gtcatggccg ggcttgtccc ggccatccac gtcttatcgc attgacccaa
     5221 agacgtggat gcccggcaca aggccgggca tgacacaagg ttttccgctt taagtgttca
     5281 ggcttgcggc tgcggggcga cctcgccgga tggcggctcg gggcgcgggc gcggcttgcc
     5341 ggccggcggc accgcagagg agcgtggcgt gctcggctcg atcaccgact cgcgcacggg
     5401 ccgcttgcct gcaagcagat cagtaatctc gtcgccggtc agcgtctcga actcgagcag
     5461 tcccttcgcg agcacttcca ggtcggcccg cttctcggcg agaatctggg ttgcctcggc
     5521 gtatccggct tcgacgagcc gccggatttc gccatcgatc ttgcgcgagg tctcctcgga
     5581 aatgttttgc tggcgcgaga cctgatatcc gaggaaaacc tcgtcctggt tctcaccata
     5641 ggcgaccgta ccgagctcat cggacaggcc ccagcgggtc accatcattc gcgcaagctt
     5701 tgtcgcctgc tcgatatccg aagcggcgcc ggaggtcacc ttctccttgc cgaacaccat
     5761 ttcctccgcg acgcgtccgc ccatcatgat tgcaaggcgt gatgtcatct gctcgcggct
     5821 catcgacagc ttgtcgcgct cgggcaattg catgaccatt ccgagcgcgc ggccgcgcgg
     5881 aataatcgtg gccttgtgca ccggatccgt cgccttcacg ttgatggcaa cgatcgcgtg
     5941 gccgccctcg tgataggcgg tcaggagctt ttcttcctcc gtcatgacca gcgacttgcg
     6001 ctcggctccc atcatcacct tgtctttggc gtcctcgaac tcggcctggg tgaccatgcg
     6061 cttgttgcgc cgcgccgcca tcaaagccgc ttcgttgaca agattcatca ggtcagcgcc
     6121 ggagaacccg ggcgttccgc gggcgatcgt cttcaggttg acgtcgggtg cgagcggcac
     6181 cttgcggacg tgcactttca ggatgctttc gcgaccaacc acatccggat tgggcacaac
     6241 gacctgacgg tcgaaacggc ccggacgcaa caacgccgga tcgagcacgt cgggccggtt
     6301 ggtcgctgcg atgagaataa tgccttcgtt cgcttcaaac ccatccatct cgaccagcaa
     6361 ctggttgagg gtttgctcgc gctcgtcatt gccgccacca aggccggcgc cgcgatgacg
     6421 cccgacggca tcgatttcgt cgatgaagat gatgcagggt gcgttcttct tggcctgttc
     6481 gaacatgtca cgcacgcggc tggcgccgac gccgacgaac atttcgacaa agtccgagcc
     6541 ggagatggtg aagaacggca cgttggcttc gccggccacc gcacgcgcga tcagggtctt
     6601 gcccgttccc ggcggaccga ccagcagcac gccgcgggga atgcggccgc cgaggcgctg
     6661 gaatttgccg gggtcgcgca ggaattcgac gatttcctgc aaatcctgct tggcttcgtc
     6721 gacccccgcg acatcctcga aggtcacacg gccatgcgcc tcggccagaa gcttcgcgcg
     6781 cgatttgccg aatccgagcg ccttaccgcc ggcgccttgc atctggcgcg agaggaaaat
     6841 ccatacgccg atcaacgcga tgaacggcag ccacgacacc agcagcgaga caaaccacgg
     6901 aacgttatcc tgcggcggcc gcgcggtaat cgtgacaccc ttggagtaaa gcttctgcac
     6961 cagaccagga tcgctggggg cataggtttg gaagctggtc ccgttggcga aagtgccatg
     7021 aatttcaggg ccctggatga caacgtctct cacccgaccc tgatcgacct ccgagagcag
     7081 ctgcgagaac gagatgtctt gcgcggtcgt gcgctgaccc gggttctgga aaagcgtgaa
     7141 cagcgccaat agcagcagga cgatgatcac ccagagggca aaattgcgaa gattagcgtt
     7201 catcagctgt cctgacccgc cgcgcgagcc ccgcggccgt ctaactaatg catccggttc
     7261 gtggcgactt cacgtcggcc ccaagtccac aatgtaggca gcgcaggtcc ccaagaaaag
     7321 gcctagaatc ttaatattct agcgcgtctc ggccggccgc gctgctccgt gtccgcgctt
     7381 ggttaagagc ttgcgactgc gcggcggcgc cctttcaact gtcagttgac gaccggtcag
     7441 cgttactacg gcgccggcca gcgtccgccg aaagcgccca ttgccggcgg tttgggcgca
     7501 atcgagggcc gatttaagcg cctcgagctt gccgagctcc acgggaccct cgtcgcccgc
     7561 cattgcgagc gctcggccga gcacgcgtag cgcaacctcg cctggcaggt cgacaaaacg
     7621 cctaacctca aacgccaacg ccgagggtcg caactcgaca gcaaggtcgc ccatagcgcg
     7681 atccacggcc gcctcgattg ccctgtccgc tcgcttgatc cggtgcgcga gtagcgcaag
     7741 tcgatgagga tcgagcccct cctcggccaa cgcgcccatg agaacgcgca gtcgcgcgcg
     7801 ggtaaaacgc ggatcccggt tcgagggatc gtcagcgtag ccgatctttg cagcacgcaa
     7861 ggtcgcgatc agccgtgcct ttggaacatc gagtagcggg cgcgccagat aaatgtcgtt
     7921 tcccaacgcc gctttttcga gatcgcctcc cggaacgacg gagattttct gcatcgcccc
     7981 aagcccagtg aggccgctgc cgcggctcat gcggatgagc actgtttcgg cctgatcgtc
     8041 gagtgtatgc gcggtaacga tgtgcgtcgc tcctgctttg cgcgccgcgt catgcagcaa
     8101 tcgatagcgc gcgaggcgtg cagcttcctg caatccggtc ggcggcttgc gcccgctcca
     8161 gcgtaatgtg cggtggt
//
LOCUS       DATDHO010000787         1524 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_480196, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000787 DATDHO010000000
VERSION     DATDHO010000787.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1524)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1524)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1524
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_480196"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..269
                     /locus_tag="VIY07_15325"
     CDS             <1..269
                     /locus_tag="VIY07_15325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383161.1"
                     /translation="KGAPTGILLNRATTLLTSAVPAPTDEQLKAYALAGLNVMARDGY
                     VAVHEAGADSRLMRAFESLAAEDKLPVGFMRCSWRAMRNCAEPG"
     gene            251..874
                     /locus_tag="VIY07_15330"
     CDS             251..874
                     /locus_tag="VIY07_15330"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6383162.1"
                     /translation="MCRAWLKKGAPLALSPNGMLNVRSVKAHYVGALGSRGARLFADY
                     SDKPGHRGVSGDQYGFDRQLVAEMMKGGFQVAIHAIGDAGNRETLEFIESVIAQKPEV
                     KNNRNRIEHAQVVHPDDFKRFAQSEVIASMEPPHCAEDKAWAEDRLGPERVKGAYAWR
                     TLRRNGARLIFNSDLTGSDHNIFYGLHAAITRRDNCNRPMAGIPNSA"
     gene            871..1098
                     /locus_tag="VIY07_15335"
     CDS             871..1098
                     /locus_tag="VIY07_15335"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6383163.1"
                     /translation="MTPEETVRAYTTWAAYASFLEKETGVIANGRWADITVMDIDPLS
                     IGATDPGKLFKGNIRMTMVGGKIIYSIKQSF"
     gene            1116..>1524
                     /locus_tag="VIY07_15340"
     CDS             1116..>1524
                     /locus_tag="VIY07_15340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383164.1"
                     /translation="MTSFQTNPSAFLTRRIAMQVDRRAFFATLGATAAIETMPSEALA
                     DALEHYLSDQLDQTASAQPAQQVPAAERTVRRGVGSLFIMQGSGASSLKQLEPMPSKP
                     TLLDFFQLRFAPANHVLQSATRALKTGMSEETIL"
BASE COUNT          324 a          442 c          465 g          293 t
ORIGIN      
        1 aaaagggcgc cccgacaggc attctgctca atcgcgcgac gacgctgctt acctcggcgg
       61 ttccggcgcc gaccgatgag caattgaaag cctacgcgct cgctggtttg aacgtgatgg
      121 cgcgcgacgg ttacgtcgcg gttcacgaag cgggcgcaga ctcgcgcttg atgcgcgctt
      181 ttgaatcgct cgcagccgaa gacaaattgc cggtcgggtt tatgcgatgc tcttggcgcg
      241 cgatgcggaa ttgtgcagag cctggctgaa gaaaggggcg ccgcttgccc tctctcccaa
      301 tggaatgctc aacgttcgat cagtcaaggc tcattacgtc ggcgcgctcg gttcgcgcgg
      361 ggcgcggctg tttgccgatt attccgacaa gcccgggcat cgcggcgtga gcggcgatca
      421 gtatggtttc gaccgccagc tcgtagctga aatgatgaaa ggtggattcc aggtcgccat
      481 tcatgccatc ggcgacgcgg gcaatcgcga gacgctggag ttcatcgaat cggtcatcgc
      541 gcaaaagccg gaagtgaaga acaaccgcaa ccgcatcgag cacgcgcagg tagttcatcc
      601 cgacgatttc aaacgtttcg ctcagtccga agtcatcgct tcgatggagc cgccgcactg
      661 tgcggaggac aaagcctggg ctgaagatcg tttgggaccg gagcgcgtca aaggcgcata
      721 tgcgtggcgc acgttgcgcc gcaatggcgc gcgattgatc ttcaattcgg atttgaccgg
      781 ttccgaccac aatatcttct acgggctgca cgcggccatc acccgccgtg acaattgcaa
      841 ccgcccaatg gctggtatcc cgaacagcgc atgacgccgg aagagaccgt gcgcgcttat
      901 acgacatggg cggcttacgc gtccttcctg gagaaagaga ccggcgtgat tgccaacggg
      961 cggtgggccg acatcacggt gatggacatt gatcctttgt ccatcggcgc aaccgacccg
     1021 ggcaagctgt tcaaggggaa tattcgaatg acgatggttg gtggtaaaat catctactcc
     1081 atcaaacaga gcttctgata ctgccgcgcg cagtattgac ctcgttccag accaatccaa
     1141 gtgcattcct gacaaggagg atagccatgc aagttgaccg acgagccttt ttcgctacgt
     1201 taggcgcgac cgcagcgatt gagacgatgc cgtctgaagc gctggcggac gcgctcgaac
     1261 actacctgag cgatcaactc gatcagaccg ccagcgcaca gccggcgcag caggtcccgg
     1321 ccgcggaacg gaccgttcgg cgaggggtag gcagtctttt catcatgcaa gggagcggcg
     1381 cgtcatccct gaagcagttg gagccaatgc cgtctaaacc aacactgctc gatttcttcc
     1441 agctgcgttt tgcgccagcc aaccacgtgc tgcagagcgc gactcgcgcg ctgaagacgg
     1501 ggatgagcga ggaaacgatc cttg
//
LOCUS       DATDHO010000788        11305 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_37545, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000788 DATDHO010000000
VERSION     DATDHO010000788.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 11305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11305
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_37545"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..481
                     /locus_tag="VIY07_15345"
     CDS             <1..481
                     /locus_tag="VIY07_15345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HEY6383165.1"
                     /translation="FARGEVAAVNVAKSPLQIPTLAFQDAAGNPVTLERWRGRTVLLN
                     LWATWCAPCRQEMPALDALEQRLGGPAFEVVAINIDTRDTDKPKEWLKEVGIQKLAYF
                     ADPTARTFQDLKAAGRAFGMPTTLLIDPHGCEIGSIAGPAEWASEDAIKLIQAALAR"
     gene            complement(508..708)
                     /locus_tag="VIY07_15350"
     CDS             complement(508..708)
                     /locus_tag="VIY07_15350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383166.1"
                     /translation="MDPLSLATALSAAQIGRAQMALAARMLRMNAEAEASIVQVLDAA
                     QRNIASLGNLAAGVGQNLNITA"
     gene            795..1223
                     /locus_tag="VIY07_15355"
     CDS             795..1223
                     /locus_tag="VIY07_15355"
                     /inference="COORDINATES: protein motif:HMM:NF033788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HEY6383167.1"
                     /translation="MVYYRRPDLDCTFAALADPTRRALLAQLSEEDALSVSELAKPFA
                     MSLPAVMKHLDVLSDAGLVGREKNGRIVSCRLRAEPMRDANDWLNRYQKFWTDRLDQL
                     AAFLEEDTWPPSQPNQASPSSAGSKHRRKKSSPRGQTRKK"
     gene            1124..1564
                     /locus_tag="VIY07_15360"
     CDS             1124..1564
                     /locus_tag="VIY07_15360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HEY6383168.1"
                     /translation="MATVATKPSLTIKRRFKAPPEKVFAAWTDPEKVKRWMGPGEIKP
                     VSVESDPRIGGRFRWLMQAPDGERHDVSGVYREAVPNEKLVFTWAWKSTPERESLVTL
                     TFKRDGDGTVMTLLHEQFFDEAARDRHEGGWTSAMEKLENYLNT"
     gene            1582..1971
                     /locus_tag="VIY07_15365"
     CDS             1582..1971
                     /locus_tag="VIY07_15365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6383169.1"
                     /translation="MPHKWSHGYFYWNELMTRDAEKAKKFYSTTIGWTFEAMPMADGG
                     TYWVAKLGDEYVGGLFPLTSPQFDGVPESWMAYLAVDDVDARVKKAQAAGATLMRPIF
                     DVPNVGRIAILKEPGGAGVGWMTPPKG"
     gene            1993..2727
                     /locus_tag="VIY07_15370"
     CDS             1993..2727
                     /locus_tag="VIY07_15370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017959559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEY6383170.1"
                     /translation="MQHAIVSQDEWLAARKTLLAKEKELSRARDRLSEARRTLPWVKV
                     AKNYVFDGPHGRESLSDLFGGKSQLIVYHFMLGPGWVQGCPSCSFLADHFDGAVVHLA
                     QRDVSLVVVSRAPFAEIEAYKKRMGWKFKWVSSHGTDFNRDFHVSFTREEKARGKVEY
                     NYAQTEFPSEEAPGLSAFIKTEAGEVLHTYSSYARGLDILVGTYNFLDMAPKGRDEGT
                     LPWTMAWVRRHDEYEPAPVKAASCCG"
     gene            2768..3424
                     /locus_tag="VIY07_15375"
     CDS             2768..3424
                     /locus_tag="VIY07_15375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009210534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY6383171.1"
                     /translation="MIRVSAFRWVPPFARGLVRDLRVRWALEEAGLPYETRLIGPQDQ
                     ASTSYRAMQPFGQVPAYEEDGLVLFESGAILLHIAERSEALMPSDRKVRARVTAWMFA
                     ALNSIEPRIQNLSAIDLFHANEEWAKTRRPEEFKFAQKRLAALSDWLEGRQYLEGRFT
                     VADLLMTTVLRIPRNTDLITQMPVVNAYRIRCEARPAFKKALDRQMADFVDEAPAAVA
                     "
     gene            complement(3426..4307)
                     /locus_tag="VIY07_15380"
     CDS             complement(3426..4307)
                     /locus_tag="VIY07_15380"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HEY6383172.1"
                     /translation="MVAKIQSVGVIGAGQMGNGIAHVCALAGYSVLLNDISVDRIKGG
                     MATINGNMARQVAKKSISEDDRKNALARIKPAEKYDGLSGCDLVIETATEKEEVKRKI
                     FSELCPSLKADAILATNTSSISITRLASSTDRPERFIGIHFMNPVPLMELVELIRGIA
                     TDDKTFETSKAFVSTLGKTIAVSEDFPAFIVNRILLPMINEAIYTLYEGVGNVEAIDT
                     AMRLGAHHPMGPLELADFIGLDTCLSVMQVLHEGLADSKYRPCPLLVKYVEAGWLGRK
                     TQRGFYDYRGEKPVPTR"
     gene            complement(4439..5386)
                     /locus_tag="VIY07_15385"
     CDS             complement(4439..5386)
                     /locus_tag="VIY07_15385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HEY6383173.1"
                     /translation="MATLLVAEHDNKALKDATNKALTAAKAIGGDVHVLVAGKDCKAV
                     AEAAAKLEGVTKVLLADAGPYEHQLAEPLAALIVSLAGSYDAIVTPATTTGKNVMPRV
                     AALLDVMQISDITKVLGPDTFERPIYAGNAIQTVKSSDAKKVITVRTSTFQATGAGGG
                     SATVENVTAASDPGVSSFVGEELSKSDRPELTSARIIISGGRAMQSRENFTKFIEPVA
                     DKLGAAVGASRAAVDAGYAPNDWQVGQTGKVVAPELYIAVGISGAIQHLAGMKDSKVI
                     VAINKDEEAPIFQVADYGLVADLYQALPELAAELDKVKR"
     gene            complement(5387..6136)
                     /locus_tag="VIY07_15390"
     CDS             complement(5387..6136)
                     /locus_tag="VIY07_15390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEY6383174.1"
                     /translation="MKILVPVKRVVDFNVKIRVKPDGSGVELANIKMSMNPFDEIAVE
                     EAIRLKEAGKATELVAVSIGPAQASETIRTALAMGADRGILVKTDAMVEPLAVAKILK
                     AIVEAEKPGLVIMGKQAIDDDCNQTGQMLAALLNWGQGTFASKLAIEGDAIEVTREVD
                     GGLQTVKLKMPAIVTTDLRLNEPRYASLPNIMKAKKKPIDDKTPDAYGVDVKPRLQVV
                     KTADPPGRKSGVKVGSAAELVSKLKDEAGVL"
     gene            complement(6233..6805)
                     /locus_tag="VIY07_15395"
     CDS             complement(6233..6805)
                     /locus_tag="VIY07_15395"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEY6383175.1"
                     /translation="MVVLNRIYTRTGDDGTTSLGTGARRKKYDLRIEAYGTLDEVNAV
                     IGLARLHTKGNNALDAALGRIQNDLFDVEADLCLAEKGPGGARLTATDVQVAWLEGEI
                     DRLNAELAPLKSFILPGGSPASAYLHLARTVCRRAERLMVELKDKETEGVSEPSLKYV
                     NRLSDYLFVAGRYANDKGTSDILWAPGQNR"
     gene            6890..7081
                     /locus_tag="VIY07_15400"
     CDS             6890..7081
                     /locus_tag="VIY07_15400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383176.1"
                     /translation="MRILTIAIAAAFLTLPVAATAKACGAAGKHDAKAATADYSAAKK
                     KKTKKQKEKVEYMRAAPMK"
     gene            complement(7099..7293)
                     /locus_tag="VIY07_15405"
     CDS             complement(7099..7293)
                     /locus_tag="VIY07_15405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HEY6383177.1"
                     /translation="MSEFMSHFLVPAAVIAVAVVLLLGLINMMRGGSPNRSQKLMRLR
                     VLLQFVAIIVIMATIWAMGH"
     gene            7561..9117
                     /locus_tag="VIY07_15410"
     CDS             7561..9117
                     /locus_tag="VIY07_15410"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY6383178.1"
                     /translation="MLAPARLRAVVAGAVVARRRDAALELGVDHLLVEASVRAAEQLK
                     TTWPKLSAATLKLPVRMIPLLVGFLAVVTIVVAPGITALAIVVALPAAFRIWIVLWPV
                     PHSLDGRSCSTPEEEDEPTYSIIAPLRGEAKVVDQLLTAIERLNYPAEKLDVIIAAEA
                     DDDDTRAAITARKHRIPITVIPVPSGKPDTKPKALNVALPFARGTYTVIYDAEDRPER
                     NQLQVALKAFRSAGNDLACVQARLCTDTQTSWLARYFTAEYAGHFDVLLPKLAALGLP
                     LPLGGSSSHFRTEALRRVGGWDPYNVTEDADLGMRLARFGYRSATIAYTTHEEAPADC
                     RRWLGQRTRWFKGWMQTWLVHMREPRQLSRDLGGAGMVAFQLIVGGNALVPLLHPVFI
                     AGLMWEVSKLELERDGWVAFAGPMHYLAAACAGYLTSAYIGWRGLSYRGVSNKMGVLL
                     YTPLHWLLLSLAAWRGACELIWKPFRWRKTEHGLDDESRQERTTRSLLELERLVSGLI
                     RRGELSQIRS"
     gene            complement(9114..9704)
                     /locus_tag="VIY07_15415"
     CDS             complement(9114..9704)
                     /locus_tag="VIY07_15415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031966 - mitochondrial membrane
                     [Evidence IEA];
                     GO_process: GO:0033617 - mitochondrial cytochrome c
                     oxidase assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEY6383179.1"
                     /translation="MTARTSQILLILSAFLTGVVIFTGVFLYSTGNFGAGPASAIGGP
                     FKLIDQNGNTITDADIKGRPFLVFFGFTRCPDVCPTTLFDVSEVMRALGKDADRTGAL
                     FITVDPEHDTPAVIKDYLSSFDPHLRGATGDRAAVDAVEKAYRVYAKKVPTESGDYTM
                     DHTALVYLMDKQGRFVAPFSLKRRPEDAAADLRRYL"
     gene            complement(9721..9885)
                     /locus_tag="VIY07_15420"
     CDS             complement(9721..9885)
                     /locus_tag="VIY07_15420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383180.1"
                     /translation="MPATDSVATQSRPILVVLLAGAVSLAIALTAGLWAYYGTTVFFE
                     MLRAGWAACF"
     gene            10087..10977
                     /locus_tag="VIY07_15425"
     CDS             10087..10977
                     /locus_tag="VIY07_15425"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HEY6383181.1"
                     /translation="MRAFAIAVAISISAATAAWAQTAQAPGPTPAPAAAKCDNPNALG
                     VSRIVEIDTTGGPGFGFEHFKAYDFLRDKEVVLTFDDGPWPGHTPAVLKALAEQCTKA
                     IFFPIGKHAGWHPEIMKQVAAAGHAVGSHTWSHKDLSKLSEQEGKDEIEKGIAGVSVS
                     LGNKPISPFFRFPALRHPPELLKYVGERNIGVFSTDMDSFDFKMRKPEQVIASVMKKL
                     EKHGKGIVLMHDFQQATAKAAPDLLKKLKESGYKVVQVVGKNPTEAKKEYVDIVLKEM
                     GGGLETARPMSSVIKTIEGN"
BASE COUNT         2320 a         3284 c         3355 g         2346 t
ORIGIN      
        1 atttgcgcgt ggcgaggtcg ccgccgttaa cgttgccaaa agtccgttgc aaatcccgac
       61 cctcgccttc caggatgcag ccggcaaccc cgtcactttg gagcgctggc gcgggcgcac
      121 ggtgttgctc aacctgtggg ccacctggtg cgcgccttgt cgccaggaaa tgcctgcgct
      181 cgatgcgctt gagcagcggc tgggcgggcc ggccttcgag gtcgtggcga tcaatatcga
      241 cacgcgcgac actgataagc cgaaggaatg gctcaaggag gtcggcatac agaagctcgc
      301 ctattttgct gacccgaccg cgcggacgtt tcaggacctt aaggcagcgg gtcgtgcgtt
      361 tggcatgccc accacattgt tgatcgaccc tcacggatgt gagatcggca gcatcgccgg
      421 tcccgccgaa tgggcgagcg aagatgcgat caagctgatc caggcggcgc tcgcacgcta
      481 gacgtcgccg cgcgctgaag ccgggcacta cgcagttata ttgagatttt gtccgacgcc
      541 cgccgcaagg ttgccaaggc tggcgatgtt ccgctgagct gcgtcaagca cctgaacgat
      601 ggatgcctcg gcctccgcat tcatgcgcaa catgcgcgcg gcgagagcca tttgcgcgcg
      661 gccgatttgg gctgccgaca acgcggttgc gagcgagagc ggatccattc tcaagagttc
      721 tacggttttt ttctcaacga aaggtgaatg ttgatcggct tgacacgggc tcgcacaatc
      781 ctatacttaa ccaaatggtt tactatcgca gacctgacct ggattgcacg tttgcagcac
      841 tggccgaccc aactcgccgg gccttgctcg ctcagctgag cgaagaggac gctctgtcgg
      901 ttagcgagct cgcaaagccg tttgcgatgt cgctgccggc agtgatgaag cacctcgacg
      961 tgctgtccga tgccggtctc gtcgggcgcg aaaagaacgg tcgcatcgtg agttgccgcc
     1021 tgcgagcgga accgatgcga gacgccaacg attggcttaa ccgctatcag aaattctgga
     1081 ccgatcggct cgatcagctt gctgcatttc tggaggaaga cacatggcca ccgtcgcaac
     1141 caaaccaagc ctcaccatca agcgccggtt caaagcaccg ccggaaaaag tcttcgccgc
     1201 gtggacagac ccggaaaaag taaagcgctg gatggggccc ggagagataa agcccgtgag
     1261 cgtcgaaagc gatccgcgta tcggcgggcg ttttcgctgg ctgatgcaag cgccggacgg
     1321 cgaacggcac gatgtgagcg gcgtctaccg cgaggctgta ccgaacgaga agctggtctt
     1381 cacctgggcc tggaaatcca cgcccgaacg cgagtcgctg gtgacgctga cgttcaagcg
     1441 cgacggcgat ggcaccgtta tgacgctgct gcacgagcaa ttcttcgacg aagcggctcg
     1501 cgaccgtcat gaaggcggtt ggaccagcgc gatggaaaaa ctcgagaact atctcaacac
     1561 ataacgacag gagtttttgt gatgccacac aaatggtcgc acggttactt ctactggaac
     1621 gagctgatga cgcgcgatgc cgagaaggca aaaaagttct acagcacgac aatcggctgg
     1681 accttcgaag cgatgccgat ggccgacggc ggcacctatt gggtggccaa gttgggagac
     1741 gagtatgtcg gcggtctgtt tccgctgacc agcccgcaat tcgacggcgt tccggaaagc
     1801 tggatggcct atctcgccgt ggacgatgtc gatgcgcggg tcaagaaggc gcaggcggct
     1861 ggagccacgc tgatgcggcc gatcttcgac gttcccaatg ttgggcgcat cgccattctc
     1921 aaggagccag gcggcgccgg cgtcggttgg atgacgccgc caaagggctg aaagttttgc
     1981 ggagataaca ccatgcaaca cgcgatcgtt tcacaagatg agtggcttgc tgcgcggaag
     2041 acgctgctgg cgaaggaaaa ggaattgtcc agggcccgcg accggctaag tgaggcgcgt
     2101 cgaacactgc catgggtcaa ggtcgcaaaa aactacgtgt tcgacggccc gcacggccgc
     2161 gaatcgttgt ccgacctgtt tggcggcaag agccagctca tcgtttatca cttcatgctt
     2221 ggcccgggct gggttcaggg ctgcccgagt tgctctttcc tcgccgatca tttcgacggc
     2281 gcggtggtcc atctcgccca acgcgacgtc agcttggtcg tggtatcgcg cgcaccgttc
     2341 gccgagatcg aagcctacaa aaagcgcatg ggatggaaat tcaagtgggt gtcgtcacac
     2401 ggcactgact ttaaccgcga tttccatgtg tcgtttacac gcgaggaaaa ggcacgtggc
     2461 aaagtggaat acaattatgc gcagaccgag tttccgagcg aagaagcgcc gggcttgagc
     2521 gcattcatca agaccgaagc gggcgaggtg ctgcacacgt actcatcgta tgcccgcggt
     2581 ctcgatattc ttgtcggcac ctacaatttc ctcgacatgg cgccgaaggg ccgcgatgag
     2641 ggcaccctgc catggaccat ggcctgggtg cgacggcacg acgaatatga gccggcacct
     2701 gtgaaagctg cctcgtgctg cggctgatcg ctgcaatcgc aaagaaaatc aggataggag
     2761 gatcagtatg atcagggtca gtgcgttccg ctgggtaccg ccctttgcac gaggtcttgt
     2821 gcgcgacttg agggtacggt gggcgttgga agaggcaggc cttccctatg aaacacggct
     2881 gatcggacca caggatcagg cgtccacgag ctatcgtgcg atgcagccat ttggacaagt
     2941 cccggcctat gaagaggacg gactcgtgct ttttgaaagc ggcgcaatcc ttttgcacat
     3001 cgctgagcgt tcggaagcgc tgatgccgtc cgatcggaag gttcgagcgc gggtgaccgc
     3061 atggatgttc gcggcgttga attcgatcga gccacgcatt cagaacctgt cggccatcga
     3121 tcttttccac gccaatgagg aatgggcaaa gacaaggcgg ccggaggaat tcaagttcgc
     3181 gcagaaacgg ctggccgcgc tgtccgattg gctcgagggt cgccaatacc tggaaggccg
     3241 gtttaccgtc gcggatttgc tgatgacaac ggtgctgcgc attccgcgga acacggatct
     3301 catcacgcaa atgccggtag ttaacgccta ccggatacgc tgcgaagcgc gccctgcctt
     3361 caaaaaggct ctggaccgtc agatggcaga ctttgtcgac gaagcgccgg ccgcggtcgc
     3421 ttgaactatc gcgtcggcac cggcttctcg ccgcgatagt cgtaaaagcc gcgttgggtc
     3481 ttgcggccta gccagccagc ctcgacgtat ttcaccagca gcgggcatgg ccgatatttc
     3541 gaatcggcca gcccctcgtg cagaacctgc atgacagaca aacaggtgtc gaggccgatg
     3601 aaatcggcga gttcgagcgg gcccattgga tggtgcgcgc cgagtcgcat cgcggtgtcg
     3661 attgcctcga cgttcccgac gccttcatag agcgtgtaga tcgcctcatt gatcatcggc
     3721 aacagaatgc ggttgacgat gaaggcgggg aaatcctccg acaccgcaat ggtcttgccc
     3781 agcgtggaaa cgaaagcctt gctggtttca aaggtcttgt cgtcggtggc gatgccgcgg
     3841 atcaattcga ccagctccat caagggcacc gggttcatga aatgaatgcc gatgaagcgc
     3901 tcgggccgat cggtggacga cgccagtcgg gtgatcgaga tcgatgaagt gttcgttgca
     3961 aggatcgcgt ctgccttcaa agaaggacag agctcggaga aaatcttgcg cttgacttct
     4021 tctttttcgg tcgctgtttc gattacaaga tcgcagccag agagcccgtc gtacttttcc
     4081 gccggcttga tgcgagcgag cgcgtttttg cggtcatcct cgctgatcga cttttttgcg
     4141 acctgacgcg ccatgttgcc gttgattgtc gccattcccc ctttgattcg atcaacagag
     4201 atgtcgttga gcagcaccga atatcctgcc agggcgcaga catgggcaat gccattgccc
     4261 atctgaccgg caccgatcac tccgacactc tgaattttgg ctaccatggt cttgtccgat
     4321 cgatgcgaag tcccggctcc tggcttcggt ccggtttttt aacgttcgaa aatttgatgc
     4381 atttttacgc tgtaatggcg cgtgaagcca ttggcgaaag aagaaaatct aaacttggtc
     4441 aacgcttcac cttatcgagt tcggccgcca gttccggcag cgcctggtaa aggtccgcta
     4501 ccagaccata gtcggcgacc tgaaagattg gcgcttcctc gtccttattg atagcaacaa
     4561 tgactttgga gtctttcatc ccggcgagat gctgtatcgc gccggaaatt ccgacggcga
     4621 tatacagttc tggcgctacg accttaccag tctgcccgac ctgccagtca ttgggcgcat
     4681 aaccggcatc gaccgcggcg cgcgaggcgc caaccgcagc accaagcttg tccgcaaccg
     4741 gttcgatgaa cttggtgaaa ttctcgcgac tctgcatggc gcggccacct gagatgataa
     4801 ttcgcgccga agtcaattcg ggccgatccg atttcgacag ctcctcgccg acgaatgatg
     4861 acacacccgg gtcgcttgca gccgtcacgt tttcgacggt tgctgaaccg ccgcccgcgc
     4921 ctgttgcctg gaacgtcgac gtgcgcacgg tgatgacttt cttggcgtcg ctcgacttga
     4981 ccgtctggat tgcattgccg gcatagatcg gacgctcgaa agtatcgggc ccgagcactt
     5041 tggttatgtc ggaaatctgc atgacatcga gcaaggccgc aacgcgcggc atcacgttct
     5101 tgcctgtcgt cgtcgccggc gtaacgatgg cgtcgtagct tccggcgaga gatacgatca
     5161 gcgcggcaag cggctcggca agctgatgct cgtagggccc ggcatctgcc aacaatactt
     5221 ttgtcactcc ctcaagcttg gcggcagctt cggctactgc cttgcaatcc ttgcctgcga
     5281 cgagcacgtg aacatcaccg ccgattgctt tcgcggccgt gagcgccttg ttggttgcat
     5341 ccttgagcgc tttgttgtcg tgctcggcaa cgagaagcgt ggccatctag agcactcccg
     5401 cctcgtcttt aagcttgctg accagctccg ctgctgatcc gacttttacg ccggacttgc
     5461 gccccggcgg atcggctgtc ttcaccactt gcagccgcgg cttgacgtcc acgccgtacg
     5521 cgtccggagt tttgtcatcg atcggttttt tcttcgcctt cataatgttc ggcagcgagg
     5581 cataacgtgg ttcgttcagc cgcaggtcgg tcgtgacgat cgccggcatc ttcagtttga
     5641 ccgtttgcag gcctccgtcg acctcgcgcg tcacttcgat tgcgtcaccc tcgatcgcaa
     5701 gcttggaagc gaaagtgccc tgcccccagt tcagcagcgc cgccagcatc tgacccgtct
     5761 ggttgcagtc gtcgtcgatc gcctgcttgc ccatgatgac caggccaggc ttttctgctt
     5821 cgacgatcgc cttaaggatt ttggccaccg caagcggctc aaccatggca tcggtcttca
     5881 cgaggatgcc tcgatcggcg cccatagcga gcgcagtccg gattgtttcg gaagcctgag
     5941 cgggcccgat tgaaaccgcg acgagttcgg ttgccttgcc ggcctctttc agccggatcg
     6001 cctcctcgac cgcgatctcg tcgaaggggt tcatcgacat cttgatgttg gcaagctcga
     6061 cgccggaacc atccggcttg acgcggatct tgacgttgaa atcaaccacc cgtttcacgg
     6121 gcacaagaat cttcatgatc ccccttccgg gtgggcactt cggcagagcg gggcggaagc
     6181 taaaggccgc gccgttcgca tgtcaacgtt tatgctgcgc cgcacaggcg atctagcgat
     6241 tctggcccgg tgcccagagg atgtcggagg tgcccttgtc gttggcataa cggccggcaa
     6301 caaaaagata gtcggacagc cgattgacgt acttgagcga gggctccgat acaccttcgg
     6361 tctctttgtc cttgagctcg accatcagcc gttccgcacg ccgacagacc gttcgcgcca
     6421 ggtgcaaata ggcggacgcc ggactgccgc ccggcaagat gaatgacttc agcggggcca
     6481 actcggcgtt aaggcggtcg atttcgcctt ccagccaggc aacctggacg tccgttgccg
     6541 tgagccgcgc gcccccaggc cccttctccg ccaggcacag atccgcttcg acgtcgaaca
     6601 ggtcgttctg gatgcgccca agcgctgcat cgagcgcatt gttgcccttg gtgtgcaacc
     6661 gcgcgaggcc gatgacggcg ttgacttcat caagggtgcc gtaggcctca atgcgcagat
     6721 catatttctt gcgccgggct cccgtgccaa gggaggtcgt cccatcatcg ccggtccggg
     6781 tatagatacg gttgagcaca accatggaca cctcgccttg agctttctct ccgccgagga
     6841 ttcagggtag cctttatctt acttggtctc aaaagatagg gtgacgctca tgcgtattct
     6901 taccattgcc attgctgccg catttctgac cttgcccgtc gccgccaccg cgaaagcttg
     6961 cggagctgcc ggcaagcatg acgccaaagc tgccactgcc gactattccg ctgccaagaa
     7021 gaaaaagaca aaaaagcaga aggaaaaggt ggagtatatg cgtgcagcgc ccatgaagtg
     7081 aggcgcttca ctagcgatct agtggcccat cgcccagatc gtggccataa ttactatgat
     7141 ggcaacgaac tgaaggagca cccgcagacg catcagcttt tgcgagcggt tcggcgaacc
     7201 gccacgcatc atgttgatca gaccaagcaa taagacgacc gcgactgcga tgacggcggc
     7261 cggcaccaga aaatgtgaca tgaattccga catggggtgc gccttctaac actgcgggcg
     7321 tgtccggcca acgcgatcag gtcgcgaatt gtcctcaaac gcatttaaat tggactcgcc
     7381 tattagttgt atcttgtcta gtgtccccga aaacgtgtgt tgttcgggtg gcgtatgggg
     7441 aacgacgttg cgggcaaggc cgacgcccgc tcctcggaaa attccgattc aagcgtttgt
     7501 tcctcattgc gcgtccaagc tgggaatccg ctcccggcaa gggacgatgg gcctcgcaat
     7561 gtgctggcgc cggcacgcct tcgtgccgtg gttgcgggtg ccgtagtcgc ccggcgtcga
     7621 gatgcggctc tcgaactcgg cgtcgaccat ctgctcgtcg aagccagtgt gcgcgccgca
     7681 gaacagctta aaaccacctg gccaaaactt tccgcggcga cactgaaact gccggtgaga
     7741 atgatcccct tgctggtggg attcttggct gttgtgacca ttgtcgtcgc gccaggtatc
     7801 accgcgctcg cgattgttgt ggcattgccg gcagcgtttc gtatctggat tgtcttgtgg
     7861 ccggtcccgc attctctcga cggacgttcg tgttccacgc ccgaagaaga agacgaaccc
     7921 acctacagca tcattgcgcc gctccggggt gaggcaaagg tcgtcgatca gctgctgacg
     7981 gcaattgagc ggctgaatta ccccgctgaa aaactggatg tgattatcgc ggcggaggct
     8041 gatgacgacg acacccgtgc ggcgatcacg gcccggaagc atcgcattcc catcacggtc
     8101 attcccgtcc cgtccggcaa accagatacg aagccgaagg cactgaacgt cgcgcttcct
     8161 tttgcccgag gcacctacac cgtgatctac gacgccgagg accggcccga acgtaatcag
     8221 ctgcaagtgg ccttgaaggc atttcgctcg gcgggcaacg acctcgcatg tgtgcaagcg
     8281 cgcctttgca cagatacgca aacaagctgg ctcgcgcgct atttcaccgc cgaatatgcc
     8341 ggacatttcg atgtgctgct gcccaagctt gcagcgctcg gcttgccgct gccgcttggt
     8401 ggttcttcga gccattttcg caccgaggcg ctgcgcagag ttggcggctg ggatccatac
     8461 aacgtaacgg aggatgccga cctcggcatg cggctcgccc gtttcggcta ccgatcggca
     8521 acgatcgcat acaccacgca tgaagaagcg ccggcggatt gccgccggtg gctcgggcaa
     8581 cgcacacgat ggttcaaggg ctggatgcag acctggctcg tgcacatgcg cgagccaaga
     8641 caactttctc gggatctcgg cggcgccggc atggttgctt ttcaactcat cgtcggcggc
     8701 aatgcgctcg taccgttgct gcaccctgta ttcattgccg gactgatgtg ggaggtctcc
     8761 aagttggaat tggaaagaga tggttgggtg gctttcgccg gaccgatgca ctatctcgcg
     8821 gcggcctgcg cgggatattt gacttcggcc tatatcggtt ggcgggggct ctcttatcgc
     8881 ggggtgtcaa acaagatggg cgttttgctg tatacgccgt tgcattggct gctgctctcg
     8941 ctggcagcat ggcggggggc ctgcgagctg atctggaagc cgtttcgttg gagaaagacg
     9001 gagcatggcc ttgacgatga gtcacggcaa gaaaggacga cgaggtcgtt gctcgaactc
     9061 gagcgccttg tctctggctt gatccggcgc ggcgaactat cccaaattcg gagctagaga
     9121 tatcgcctca aatcggcggc agcgtcttcc ggccgtcgct tgaggctaaa cggcgcaacg
     9181 aaacggcctt gcttgtccat cagatacacc agggccgtgt ggtccatggt gtagtcgccg
     9241 ctctcggtcg gaactttctt ggcataaacg cggtacgctt tttcgacagc atcgactgca
     9301 gcgcgatcgc cggtcgcgcc gcgtaaatgt gggtcgaagc tggacaaata gtcctttatc
     9361 acagctggtg tgtcgtgttc cggatcgacg gtgatgaaca gggcgccggt acggtccgca
     9421 tctttcccca gcgcacgcat gacctcggac acgtcaaaca acgtcgtcgg acaaacgtcc
     9481 gggcagcgcg tgaagccgaa aaacacaagg aaaggcctgc ccttgatgtc ggcatcggtg
     9541 atcgtattgc cgttctggtc gatcaacttg aacggaccgc caatggcgga cgccggcccg
     9601 gcaccaaagt tccctgtgga ataaaggaac acgccggtga agatgaccac gccggtgaga
     9661 aatgcagaaa ggatcaacag gatctgggac gtgcgtgctg tcatggcatg acaatttcgg
     9721 tcagaaacat gccgcccagc ctgcgcgtaa catctcaaaa aagaccgtcg tgccgtaata
     9781 ggcccacaga ccagccgtta gcgcgattgc caatgaaacc gcgccggcaa gcaggaccac
     9841 gagaatgggc cgggactggg tagccacgga atcggtcgcc ggcatatttg ccctccgggg
     9901 aaacgcgaat cacagataag cccgacaagg aactcaagca atccgccgcc gccgccttag
     9961 ataaaccatc ctaacaccaa taaatatcgg ccttttagtg gtatcggggc gtggcgttga
    10021 ctcgatacgt caaagccgtg atgaatagtt cacgaaaatg cacctctttc acgtatggag
    10081 aatctgatgc gcgcttttgc gatcgccgtg gcgatctcga tctcggcggc cacagcggcc
    10141 tgggctcaga ccgcgcaggc tcccgggcca actccggctc ccgcagccgc gaaatgcgat
    10201 aatcccaacg cccttggagt ttcccgcatt gtcgagatcg acacgactgg cggacccggc
    10261 ttcggattcg agcatttcaa ggcctatgat tttctccgcg ataaagaggt cgtcctgacc
    10321 ttcgatgacg gtccatggcc tggacatacg ccggccgtgc tcaaggcatt ggccgagcag
    10381 tgcaccaagg cgatcttctt ccccatcggc aagcatgccg ggtggcatcc cgagatcatg
    10441 aaacaggttg cagcggccgg ccacgctgtt ggatcgcaca catggtcgca caaggacctg
    10501 tcgaagctca gcgagcaaga aggcaaggac gagattgaaa agggcattgc cggagtcagt
    10561 gtttctctcg gcaacaagcc gattagcccg ttcttccgct tccccgcctt gcggcatccg
    10621 cccgaactct tgaagtatgt gggcgaacgc aacatcggcg tcttctccac cgacatggat
    10681 tcattcgact tcaagatgcg caagccggag caagtcattg cctcggtgat gaagaagctg
    10741 gagaagcacg gcaagggcat cgttctgatg cacgacttcc agcaagcgac tgcaaaggcg
    10801 gcgccggacc tgctcaagaa gctcaaggag agcggctata aggtcgttca ggtcgtcggc
    10861 aagaacccca ccgaagccaa gaaggaatac gtcgacatcg tgctcaagga gatgggcggc
    10921 ggtctcgaga cggcccgccc aatgtcgagc gtgatcaaga ccatcgaagg caactgattt
    10981 cgccatcgtc gtaattcagg ccggccgcgc aagagcgcgg tcggtttttt tgccgcatac
    11041 tcctccgacc ctgtgctgtg ataaactttg acagcagagt tcagaatcag gggtgagcaa
    11101 atggccgtgc tcggtattgc tttcggaatg ctcgctgcaa tatggattct tgtcttgctg
    11161 ggctcgccgt tttttggtcc gcgcgatcat tagtgggccc gtccaaactg atagctgaaa
    11221 ttacagcgat actgtccgat caaccgacta tttcaatgtc tgggttgcga tcgcaaccaa
    11281 atgataccta tgttcgtttc gttag
//
LOCUS       DATDHO010000789         7814 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_138103, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000789 DATDHO010000000
VERSION     DATDHO010000789.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7814)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7814)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7814
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138103"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(186..1847)
                     /locus_tag="VIY07_15430"
     CDS             complement(186..1847)
                     /locus_tag="VIY07_15430"
                     /inference="COORDINATES: protein motif:HMM:NF012431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HEY6383182.1"
                     /translation="MSNNSTVAAVLAKDLARFGARRCFGLLGTANFKISHALVEAGVD
                     LISARHEGNAASMADAYAKATGELTLVSVHSGPGLTNAITGIGEAAKSRTPLLVLAGD
                     VPTGNVKSNFYMDQAELVRSVGAISERIYTPQSARGDLLRAVTCALHDRQTVVLSLPL
                     DVQDAKIDATNAPLELRPVPGRLQPNPEDIRSLADAVARAKRPLVLGGRGAVLSDAEE
                     SLTALAERIGALLATSVCGHGLFADNPWSLGISGGFSSPIADELISESDLILGFGVSF
                     TQWTTKKGKLIGPDAKVAQIDIEAPKLGYQMPVQYAVLGDAKTTAETLLAEIDRRGAS
                     IRKSGRRNDATRERIRSGDNHHSRYPDQSSDRYIDPRTVSKAVDDVLPRDRVVASDSG
                     HFCGWVPRYLRVPSPKASCLSHSFQSVGLGLASAIGLAVANPGKLAVLGAGDGGFLMS
                     IADLETAVRLGLRMCILVYNDSSYAAEVHFFRRQGYSIDIVKFPETDFATIARGYGAR
                     AATVRTLADLEPVRNWVNDGAPGVFLIDAKINPDLEADWHAEHFP"
     gene            1951..2916
                     /gene="dctP"
                     /locus_tag="VIY07_15435"
     CDS             1951..2916
                     /gene="dctP"
                     /locus_tag="VIY07_15435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein DctP"
                     /protein_id="HEY6383183.1"
                     /translation="MCRKFALGLIAATVFCSSSFAQEITLRAVTAFAEKTTYSRGFEK
                     FIDQVNAEGKGLVQINYIGGPKAMPPFEVGNALKTGVVDIANTTGAFTTNVMPESDAW
                     KLTQHPMSELRKNGGYDYMAKLYAEKMNAIFLARLVDNNPFHLYLTKPISAPDLTGLK
                     IRITPVYRDFFQALGATVVQTPPGEVYTSLERGVVDGYGWPITGIFDLGWHEKTKYRV
                     DPGFYTAEVSVLVNKTTWDKLSDAQKAVLRKAAAAGEAAAFAEFDAENAKDTKRQADA
                     GIQTIKFDGASAEAFRAKAYQAGWEGIIKQSPEHGPKLREYFSKK"
     gene            2950..3465
                     /locus_tag="VIY07_15440"
     CDS             2950..3465
                     /locus_tag="VIY07_15440"
                     /inference="COORDINATES: protein motif:HMM:NF016200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HEY6383184.1"
                     /translation="MAHLSEWYGRLLDALVFAACLLLLLMTVMIGADVVSRNIGGGGV
                     AISNEISEDILYLMTLLAAPWLLRQGQHIRVDIILRILPVRVAWALEWLGDIVGLLCC
                     LYFVWYGYLITAASYKAGSINIKTLVTPEWWTLAPLPVGFALLAIEFVFRMYRLSTAE
                     IGLRDDAVSAA"
     gene            3494..4807
                     /locus_tag="VIY07_15445"
     CDS             3494..4807
                     /locus_tag="VIY07_15445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0031317 - tripartite ATP-independent
                     periplasmic transporter complex [Evidence IEA];
                     GO_function: GO:0015556 - C4-dicarboxylate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015740 - C4-dicarboxylate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6383185.1"
                     /translation="MSWQMASLLLLGGSTVLLFAGMPVAISFIAINLIGAFLFLGGEA
                     GLHQVARNSVAAAINFSLTPIPLFILMGEVLFHTGLALKVIDGVERLIRQVPGRLAVV
                     AVVAGTIFSAISGSTIATTAMLGSLMLPVMLSRGYNPVLATGPIMAIGAVDMLIPPSA
                     LTVLLGSLSGISISKLLIGGVVPGLILSVAFVGYIVVRVLTRPDLAPAAPIESKTGWA
                     RYELLVFYVLPLASIFVVVVGAMSAGIATPTESAALGALATMALAASYRALTFENLVR
                     ALRGTVAISGMILFIILGAITFSQILSFSGATQGIVNAILGQGLSTLAILVGMMLLLI
                     FLGIFVDQVSMMLITLPVFMPIVQRLEIDLIWFGVLYLICMQLGLLLPPHGLLLMTMK
                     GVAPPQVTMSHIFRAVVPYIAMSIALLLIIISFPAIATWLPNILG"
     gene            complement(4828..6309)
                     /locus_tag="VIY07_15450"
     CDS             complement(4828..6309)
                     /locus_tag="VIY07_15450"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase family protein"
                     /protein_id="HEY6383186.1"
                     /translation="MNKPFDTVIKNARVVRPNKTSVDCLDIAIQDGKIARLGPEIQVE
                     QAKQVFDARNHLAFPGCVDAHMHIGIYAPLAQDAVSESKAAAMGGVTSSLNYLRTGHY
                     YLNRGGPYREFMPEVFRQAAGRFWVDYGFHIAPIESGHIDEMEYLITEHGVTSFKIFM
                     FYGGYGLHGRSSQQNEFLMIGPDERYDIAHFEFIMRSAQRLMDKFPGHAAHISVSLHC
                     ELAEILNAYTKIVEREGKLTGLRAYSAARPPHSEGLAIWIASYLANETNCLNINLLHL
                     SSRKAVDAAWTMQQVFPHIAFRREVTVGHLLLDTDCKCAVHAKVNPPIRPREDVEALW
                     QAVLDRKIDWIVSDHACCSAEQKWSKDDPTNIWLAKSGFGGTEYLLSGVLSEGSKRGM
                     SYNHMAELLSWKPAQRFGLPSKGDIAPGYDADIVIVDPHENFVVRAAESESEQGYSPF
                     EGIELSGRVKSTFLRGTLIYDNGKIVGPAQGKYLRRAEVVPTR"
     gene            complement(6334..7302)
                     /locus_tag="VIY07_15455"
     CDS             complement(6334..7302)
                     /locus_tag="VIY07_15455"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6383187.1"
                     /translation="MADKFNLSAAVAILLLLVPHAPQADEFPTHPLKLLVGAPAGGTT
                     DTIARAIAEPMAAALKQPVLVENRPGAGGNLAAAAVARSAPDGYTLLVSFSSHTINAT
                     LYPTLPYDPVADFTPITMVARVPSLLVGRADLPAKDLKALIELARTKPHTLTIGIGGI
                     GSSLHLAGEKFKQMTGVDLLNVPYKGTAPALTDLLGGQIDLMFISLVTGAEQVRAGKL
                     RAYGVTSEKRQSLFPDLPPIGETVPGFESVAWFGVFAPAKLPDAITKKLNAVVVAALA
                     EPKLRDQLKAEGATGVGNSPKEFATFVREDIGRWAPLVRSSGATPN"
     gene            complement(7305..>7814)
                     /locus_tag="VIY07_15460"
     CDS             complement(7305..>7814)
                     /locus_tag="VIY07_15460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEY6383188.1"
                     /translation="EEMIGKIKAATDARQSRDTLVVARTDAAAVEGFESAIARAVSYR
                     DAGADILFVEAPKTRAELQRVPIAIKDVPLIANMVEGGKTPPLPAADLEAIGFSLVIF
                     PGGIVRALARTAKDFYASLAAHGTSDPFLDRMYDFTALNDVIGTSEMISLGKQYESMS
                     VNTKKGRST"
BASE COUNT         1530 a         2313 c         2245 g         1726 t
ORIGIN      
        1 tctggccctt ctcaagcagg aaggtcagtc cattctgatt gtggacaagc atctcgaagc
       61 attgctgcgc tttgcagacc gacatgtcgt gatcgaaaaa ggccatgtgg tctggaccgg
      121 cacctcggct gcgctcgcgg ccgatccaag cattcgccaa cgctatctcc agatctgagc
      181 gcgctttatg ggaaatgctc ggcgtgccaa tcggcttcca ggtccggatt gattttggcg
      241 tcgatcagga aaacgccggg cgcgccgtcg ttgacccaat tccgcaccgg ctccagatcg
      301 gcaagggtcc gaactgttgc tgcgcgtgca ccatatcctc gggcgatcgt ggcaaaatcc
      361 gtttcgggga atttcacgat atcgatcgag taaccctggc gccgaaagaa atgcacttcc
      421 gcagcatagg agctgtcgtt gtagacgagg atgcacattc gcagcccgag acgcactgca
      481 gtttcaagat ctgcgatcga catcagaaac ccgccatcgc ccgcacccag cacagcgagc
      541 ttgccgggat ttgcgacggc aagaccaatc gcagatgcca ggccaaggcc gaccgattga
      601 aatgaatgac tgagacatga tgctttcgga ctgggcaccc gcaggtagcg tgggacccat
      661 ccgcagaaat gtccggaatc ggaagcgacc actcggtccc gcggcagaac atcgtccacc
      721 gccttgctga ccgtgcgagg atcgatgtag cgatcgctcg actgatccgg ataccggctg
      781 tgatgattgt cgcctgaacg aatgcgctcg cgcgttgcat cgttgcgacg accggatttt
      841 cggattgacg cgccgcgccg gtcaatctcc gccaacaggg tctcggctgt cgtcttcgca
      901 tcgccaagca cggcatattg caccggcatc tgatagccca gtttgggtgc ctcgatatca
      961 atttgcgcaa ccttggcgtc cggcccgatc agcttgcctt tcttggtcgt ccattgcgtg
     1021 aagctcacgc caaagccgag gatcagatcg ctttcggaga tcagctcatc cgcgatcggg
     1081 gatgagaaac caccgctgat gcctagcgac catggattgt ctgcaaacag gccatggccg
     1141 caaacagacg ttgcgagcag cgctccgatt ctttcggcca atgccgtcag tgactcttcg
     1201 gcgtcggaga ggacagcacc gcgacccccc agaacaagcg gtcgctttgc cctcgcgact
     1261 gcatcggcaa gcgatcggat atcttcgggg ttgggctgca gccgccccgg cactggacgc
     1321 aattcaagtg gcgcgtttgt cgcatcgatt tttgcgtcct gcacatcgag cggcaagctc
     1381 agcacaacgg tctggcggtc gtgcaaggcg cacgtcaccg cgcgcagcag atcgccgcgg
     1441 gcggattgcg gcgtataaat ccgttcggag attgccccga ccgatcgcac caactctgcc
     1501 tggtccatgt aaaaattcga tttgacattg ccggtgggta catctccggc gagaaccaga
     1561 agaggtgtgc ggcttttcgc ggcctcccct attccggtga tcgcattggt gagcccaggg
     1621 cccgaatgga cgctgacaag ggtcagctcc ccggtcgctt tggcataggc gtccgccatg
     1681 ctggcagcat tgccttcgtg acgcgctgaa atgaggtcaa cgccggcttc gaccagcgca
     1741 tgcgaaatct tgaaatttgc cgtaccgagc aagccgaaac agcggcgtgc gccgaacctt
     1801 gcgagatcct ttgccaggac tgcggcgact gtcgaattgt tgctcacgcc tgattgtcgc
     1861 acttgtttga ctctccaacc cactcataac aatataggaa atccaaaaca aataacccga
     1921 gcgttatctc ggcaggggag gatcttcatc atgtgcagga agtttgcgct cggattgatt
     1981 gccgcaacgg ttttttgctc atcgagtttt gcccaggaaa tcaccctccg ggctgtaacg
     2041 gccttcgccg agaaaactac ttactcgcgt ggctttgaaa aattcatcga tcaggtcaat
     2101 gcggaaggga aaggcctcgt ccagatcaat tacatcggcg gaccgaaggc catgccgcca
     2161 ttcgaggtcg gcaatgcact caagaccggc gttgtcgata tcgcgaacac gaccggcgcg
     2221 ttcaccacga acgtcatgcc cgaatccgac gcctggaagc tcacccagca cccgatgtcg
     2281 gagcttcgca aaaatggcgg ctatgactat atggccaagc tctacgcaga gaaaatgaat
     2341 gccatttttc tcgcacgact ggtcgacaac aatccgtttc atctctacct gacgaagccg
     2401 atttctgctc cggacctgac cggattgaag attcgcatca cgcctgtcta tcgcgacttc
     2461 ttccaggctc tcggcgctac ggttgtccaa acgccgccgg gcgaggtcta tacatctctc
     2521 gaacgcggcg tcgtcgacgg ttatggctgg ccgatcaccg ggattttcga tcttggctgg
     2581 cacgagaaga cgaaatatcg cgttgatccg ggcttctaca ccgccgaggt ctcggtgctc
     2641 gtcaacaaga ccacctggga caagctgtcc gatgcacaga aggccgtgtt gcgcaaggcc
     2701 gccgcggccg gggaagcggc ggcgttcgct gaattcgacg cagagaacgc aaaagacacg
     2761 aagcggcagg ccgatgccgg catccagacc atcaaattcg acggcgcctc agccgaagcc
     2821 tttcgcgcga aagcctacca ggctggctgg gaaggcatca tcaagcaaag tcccgaacac
     2881 ggcccaaaac tcagggaata tttctccaag aaatagcggc ctgtccacgt tggcccgatg
     2941 aaagcgagca tggcgcacct atccgaatgg tatgggcgcc tgcttgacgc gcttgtgttt
     3001 gcggcgtgtc tcctcttgct gctcatgacg gtgatgatcg gcgccgatgt tgtgtcacgc
     3061 aacatcggtg gcggcggcgt cgcgatcagt aatgaaatct ctgaggacat tctctatctg
     3121 atgacgctgc tggctgcgcc atggcttctc cgtcaaggcc agcacattcg cgttgacatc
     3181 atcctccgca ttctgcccgt tcgggttgcc tgggctctgg aatggctcgg cgacatcgtc
     3241 ggtcttctgt gctgccttta tttcgtctgg tacggatatc tcatcacggc ggcaagctac
     3301 aaagccgggt cgatcaatat caaaacgctg gtcacgcccg aatggtggac actcgcgccg
     3361 ctcccggtcg ggttcgcact cctcgctatc gaatttgttt tccgcatgta ccgactatcc
     3421 acggccgaaa taggcttgcg ggacgatgct gtttcggcgg cctgaaggca tcgcgtagga
     3481 gacggttgtg agcatgtcct ggcaaatggc ctcgctgctg cttctcggag gctcgaccgt
     3541 cctgttgttt gcgggaatgc ctgtcgccat ttccttcatt gcgatcaacc ttatcggcgc
     3601 gtttctgttt ctgggcggtg aagccggttt gcaccaggtt gcacgcaaca gcgtcgcggc
     3661 cgcgatcaat ttctcgctca cgccaatccc actgtttatc ttgatgggag aggtactctt
     3721 tcacaccggg cttgcgctga aagtcatcga cggcgtcgag cgtctgatcc gccaggtgcc
     3781 tgggcggctc gccgtggtcg cggtggtcgc aggaacgatc ttctccgcga tatcggggtc
     3841 gaccattgcg acaacagcaa tgctgggttc gttgatgctg ccggtgatgc tttcgcgtgg
     3901 ctacaatccg gttctggcga ccggaccgat catggcgatc ggcgcggtcg atatgctcat
     3961 tcccccctcc gcgctgaccg tcctcctcgg cagtctttcg ggcatttcaa tctccaagct
     4021 gttgatcggc ggggttgtgc cgggcctgat cctgagtgtt gcttttgttg gctatatcgt
     4081 cgttcgcgtg ctgacacggc cggatctcgc tccggcagcg cccatcgaaa gcaaaaccgg
     4141 gtgggccaga tacgagctcc tcgttttcta tgtgttgccc ttggcctcga ttttcgtcgt
     4201 tgtcgtcggc gcgatgtcgg cggggattgc aacgccaacg gaatcggcgg cattgggggc
     4261 ccttgccacc atggcgctgg ctgccagtta tcgcgccctc accttcgaaa acctggtgcg
     4321 cgcactgcgt ggcacggtcg caatttcagg aatgattttg tttatcatcc tgggagcaat
     4381 taccttctcg cagatcctca gtttttccgg agccacgcaa ggcatcgtca acgcgattct
     4441 cggccaggga ctttccacct tggccattct cgttgggatg atgctgttgc taatttttct
     4501 gggaattttc gtggatcagg tcagcatgat gctgatcacc ttaccggtat tcatgccgat
     4561 cgttcagcgc ctcgagatcg atttgatctg gttcggcgtg ctttatttga tctgcatgca
     4621 gctcggtctg ctgctgccgc cgcacgggct actattgatg acgatgaagg gcgtcgcgcc
     4681 accgcaggtc acgatgtcac atatcttcag ggccgttgtg ccctatatcg caatgagcat
     4741 cgccctcctg ctcattatta tttcattccc ggcaattgcg acctggctgc caaatattct
     4801 ggggtgaatc cgcaaacgac attcgattta tcgcgtcgga acgacttccg cccttcgcag
     4861 gtatttgccc tgcgccggac cgacgatctt tccgttgtcg tagatgagag taccgcgcaa
     4921 gaaagtgctc ttcactcggc cgctgagctc gatgccttcg aacggcgaat aaccctgctc
     4981 ggattcggat tcggccgcgc gcaccacaaa attttcgtgc ggatcgacga tcacgatatc
     5041 ggcatcgtaa cctggcgcga tatccccttt gctgggaagg ccgaagcgtt gcgcgggctt
     5101 ccagctcagg agctcggcca tgtgattgta agacatgccg cgcttgctgc cctcgctcag
     5161 aacgcctgaa agcagatatt cggtgccgcc aaaccccgac ttggcaagcc agatatttgt
     5221 cgggtcgtct ttggaccact tctgctcggc cgagcagcag gcatgatcgc tcacgatcca
     5281 gtcgatcttg cggtcaagca ccgcttgcca cagggcttca acgtcctcgc gcgggcggat
     5341 cggcggattc accttggcat gcaccgcgca tttgcagtcg gtatcgagca gaagatggcc
     5401 gaccgttacc tcgcggcgga acgcaatgtg cggaaacacc tgctgcatgg tccacgcagc
     5461 atcgacagcc ttgcgtgagc tcaggtgcaa caggttgatg ttcaggcaat tggtctcatt
     5521 cgccagatat gaggcgatcc atatggcaag accttctgaa tgcggcggcc gcgcagcgct
     5581 gtaagcacgc aagccagtca gcttgccctc ccgttccacg attttcgtgt atgcattgag
     5641 gatttctgca agttcgcaat gcaggctgac gctgatgtga gcagcgtgcc cggggaattt
     5701 gtccatcagg cgctgcgcgg agcgcatgat gaattcgaag tgcgcgatgt cgtagcgctc
     5761 gtccggcccg atcatcagaa attcattctg ctgcgacgag cgtccatgca gtccgtagcc
     5821 accgtaaaac atgaaaatct tgaacgaggt gaccccgtgt tccgtgatga gatactccat
     5881 ctcgtcgatg tggccggatt cgatgggcgc gatatgaaag ccgtagtcga cccagaagcg
     5941 tcccgccgcc tgcctgaaca cttcgggcat gaactcacga taggggccgc cccggttgag
     6001 gtagtagtgt cccgtgcgca gataattgag gctcgaggta acccctccca ttgccgcagc
     6061 cttgctctcg gaaaccgcat cctgggcgag cggcgcatag attccgatat gcatatgggc
     6121 atcgacgcag cccggaaacg ccagatggtt cctggcatca aaaacttgct tggcctgctc
     6181 cacctgaatc tcgggtccga gccgcgcgat ctttccgtcc tggatcgcaa tatcgaggca
     6241 atcgaccgat gtcttgttcg gccgaaccac gcgggcattc ttgatcacgg tatcgaaagg
     6301 cttgttcata cgaggcattc cctgccctag tccttaattc ggggttgccc cggatgacct
     6361 gacgagcggt gcccatcgcc cgatatcttc gcgcacaaag gtcgcgaatt ccttgggact
     6421 attgcccacg cctgtggcgc cttcggcctt caattgatcg cgcagtttcg gttctgcaag
     6481 cgcggcgacg acgacagcgt tgagtttttt agtgatcgca tcggggagtt tggctggcgc
     6541 gaacacgccg aaccatgcga cggactcgaa cccgggcacg gtctctccga ttggcggcag
     6601 atcgggaaac aacgactgcc ttttctcgct cgtcacgccg taggcacgca gtttacccgc
     6661 gcgaacttgc tcggcgcccg tgaccaggct gatgaacatc agatcgatct gcccgcccag
     6721 caggtcggtc agcgccggtg cggttccttt atacgggaca ttgaggagat ccacgccggt
     6781 catttgcttg aacttctcgc ctgcgagatg gagcgacgaa ccgatgccgc cgattccgat
     6841 ggtcagggtg tgcggtttgg tgcgcgccag ttcgatcagc gccttgagat ccttggcagg
     6901 cagatcggca cgtcccacga gcagactcgg cactcttgcc accatcgtga tcggcgtgaa
     6961 atcggcgacg ggatcgtaag gcagcgttgg ataaagcgtc gcgttgatcg tgtgactgct
     7021 gaagctcacc agcagcgtgt atccgtcggg tgctgacctc gcgacggcgg ccgcggccag
     7081 attgccgccg gctcccgggc ggttttcaac cagaacaggc tgcttcagcg cggccgccat
     7141 cggttctgcg attgcgcgcg caattgtatc ggtcgtgccg ccggccggag caccgaccaa
     7201 cagcttgagc ggatgcgttg gaaattcgtc ggcctgcggt gcatgcggca ccagcagcaa
     7261 aagaatcgcg acagcagcgg acagattgaa cttatcagcc aatttcacgt gctgcggcct
     7321 ttcttcgtgt tgactgacat tgactcatat tgtttgccga ggctgatcat ctccgatgtt
     7381 ccgatgacgt cattgagagc cgtaaaatcg tacatgcggt ccagaaacgg atcggaggtg
     7441 ccatgcgctg cgagcgaggc gtaaaaatcc ttcgcagtac gcgccaatgc tcggacaatg
     7501 ccgcctggaa aaatgaccag cgagaagccg atcgcttcaa gatccgccgc cggaagcgga
     7561 ggggtcttgc ccccttccac catgttcgcg atcagcggca cgtctttgat cgcgatcgga
     7621 acgcgttgca gctcggctcg tgttttcggt gcttcaacga agagaatatc ggcgcccgcg
     7681 tcacggtaac tgacggcgcg cgcgatagcg ctctcgaaac cttcaacagc cgccgcgtcg
     7741 gtccgcgcga ccacaagtgt gtcccgtgat tgccgtgcat cggtcgcggc tttgatcttg
     7801 ccgatcattt cctc
//
LOCUS       DATDHO010000790         3431 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_84093, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000790 DATDHO010000000
VERSION     DATDHO010000790.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3431
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84093"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..645)
                     /locus_tag="VIY07_15465"
     CDS             complement(<1..645)
                     /locus_tag="VIY07_15465"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY6383189.1"
                     /translation="MIDPAHQRRQRLTGIALMCGAVATFSGIDATGKYLLHYMDPLQV
                     VWARYFGAFLLALIFLNPITKPKMMTTTRPLMQFGRSALLLGSTALSFFALRYLQLDE
                     ALAILFSTPFLVALLCGPLLGEWVGWRRWAAIGIGFFGVLLVARPGLGGLHPAALLTL
                     GAAVCYALYSISTRVLARSDSSETTLFYSNLVGAVAMFPVVPFVWTTPQNALVIA"
     gene            complement(642..1397)
                     /locus_tag="VIY07_15470"
     CDS             complement(642..1397)
                     /locus_tag="VIY07_15470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6383190.1"
                     /translation="MANKIDLNARNAVVTGGAQGIGRAIVDRFLESGAAVAIWDRDVG
                     LAKKTASELQNRGRVEVFATDVTNYSDVERARDDTLKTFGRIDILVNNAGIAGPNVKT
                     WEYPLDAWRSVLSINLDGPFHCCRALAPVMVAQNYGRIVNIASIAGKEGNPNAPAYSA
                     SKAGVIALTKSLGKELASYDISVNCITPAAAKTAIFEQMTQEHIDFMLSKIPRGRFVT
                     VEEIAALAAFCASADCSFTTGAVFDISGGRATY"
     gene            1713..2444
                     /locus_tag="VIY07_15475"
     CDS             1713..2444
                     /locus_tag="VIY07_15475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY6383191.1"
                     /translation="MDELNLALFLAAAFFGGLTSGLSGFAMGLVVSGVWLHIVAPDQN
                     ALLIVLCGLVTQGSGIWRVRHAVDWRAVAPFIIGGALGVPAGTALVTTVDPETVRFTM
                     GVLLVIYSLYSLARPRLKSVKAGAPTEFAVGIANGLIGGLTGLGGIAVTVWCQLRGGP
                     KDTQRAVFQPVMFATFVMSAVSFAVAQAFTVQTLQLYALALPVLIAGIWCGFSLYGKL
                     GDAAFRKTILLLLLVAGVSLIVPIR"
     gene            2538..3362
                     /locus_tag="VIY07_15480"
     CDS             2538..3362
                     /locus_tag="VIY07_15480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromate resistance protein ChrB
                     domain-containing protein"
                     /protein_id="HEY6383192.1"
                     /translation="MLSPSFSISPKDLWNAIATRSAPQVVDVRRRDAYEASPQLLPGA
                     IWRDAAKTDQWMSDLDPARPIAIACKAGHEMSQSTVAQLRADGIDARLIDGGYEGWAK
                     AGLPFVAKGELERFAPRRPSVWVTRRRPKIDRIACPWLIRRFLDPQARILFVDPDEVV
                     NVARESGGVPFDIKDVELSHVGERCSFDTMLRIFGLEGEPSLARLALIVRGADTARYD
                     IAEEAAGLHAVSLGLSALAGDDDHGLLERGFIVYDALFAWLRFAAEERHNWPAKAA"
BASE COUNT          684 a         1030 c         1033 g          684 t
ORIGIN      
        1 cgctatcacg agagcatttt gcggtgtggt ccacacaaac gggacaaccg gaaacatcgc
       61 aaccgcgcca accaggttcg aatagaacag cgtcgtctca ctggaatcgc tgcgcgccag
      121 cacgcgcgtc gagatcgagt aaagcgcgta acagaccgca gcgcccaacg tcagcagcgc
      181 cgcgggatga agcccgccca ggcccggtct cgcaaccagc agcacgccaa agaagccaat
      241 gccgatcgcc gcccagcgcc gccaaccgac ccactccccg agcagcgggc cgcaaagcag
      301 cgcaacaaga aacggcgtcg aaaaaagaat cgccagcgcc tcgtcaagct ggaggtagcg
      361 cagcgcgaaa aaactcaatg ccgtcgatcc aagcagcagc gccgagcggc caaattgcat
      421 taacggccgc gtcgtcgtca tcatcttggg ctttgtgatc ggattgagaa agataagcgc
      481 caacaggaag gcgccgaaat agcgcgccca cacgacctgc aaaggatcca tataatggag
      541 caaatatttt ccggtggcgt cgatgccgga aaacgtcgca actgcaccgc acatcaaggc
      601 aatgccggtt agccgctggc ggcgctggtg tgcgggatcg atcaataggt ggctcgcccg
      661 ccggaaatat cgaataccgc acctgtcgtg aacgagcagt ccgccgaggc gcaaaaggcg
      721 gcaagcgccg cgatctcctc cacggttaca aaccgtccgc gcggaatctt cgacagcatg
      781 aaatcgatat gttcctgagt catttgttca aaaattgcgg tctttgccgc agccggggtt
      841 atgcagttga ccgagatgtc gtaggaagca agctccttgc caagtgattt ggtcaaagca
      901 ataacgcccg ccttcgatgc cgagtaggcc ggtgcattcg ggttgccctc tttgccggca
      961 atcgaagcga tgttgacgat ccgtccgtaa ttctgcgcga ccatgactgg cgccagcgca
     1021 cggcaacagt gaaacggtcc gtcgagattg attgaaagta cgctgcgcca cgcgtcgagg
     1081 ggatattccc aggtttttac attcggccct gcaatgccgg cgttgttgac caggatgtca
     1141 atgcggccga aggtcttgag tgtgtcatcg cgcgcgcgct ccacatcgga atagttggtc
     1201 acgtctgtcg caaaaacctc gacgcgcccc cggttttgca attcagaagc ggtttttttc
     1261 gccagtccga catcgcgatc ccagatcgcg actgcagcgc ccgactccag aaagcgatcg
     1321 acgatcgcgc gaccaatacc ttgcgcaccg ccagtaacca cggcgttgcg cgcattcaga
     1381 tctatcttgt tagccatgtc ggcctcccgt cgaaaaaatt agccaactgg gtgccccgtg
     1441 gcgagtgatg aaaacgcggc cgtgggatgc gacccttgta cgaactcctt gtctgttata
     1501 agtgtaaggc tgtggggcta acgacggtcg ccccgcgctt ccaaggctcg cgagcccaag
     1561 caccgtctcc ttcggtgaac ggaggagacc tatggtgttt tgggggctgg cgatcccgaa
     1621 aacagcccat caagcttggg ggaccaagcc gcctccccct cagatctcaa ttgatccaag
     1681 cgctgcgtcc ttttgcttca ggagcaaccg ctatggatga attgaatctg gctcttttcc
     1741 tcgcagcagc gtttttcggc ggcctaacgt caggcctatc tggcttcgca atgggactcg
     1801 tcgtctcagg cgtttggctg cacattgtcg ctccggacca gaacgcgctt ctcattgtgt
     1861 tgtgcggact tgtcacgcaa ggttccggca tctggcgggt tcgtcacgcc gtagactggc
     1921 gggcggtcgc accattcatc atcggcggcg cgctcggtgt tcccgccggc accgctcttg
     1981 tgacgacagt cgatcccgaa acggttcgct tcacgatggg tgttctgctg gtgatctaca
     2041 gtctctatag tctcgcccgg ccccgcctta aatcggttaa ggccggtgcc ccgacagagt
     2101 tcgcagtagg catcgcaaac ggcctgatcg gcggattgac cgggcttggt ggtattgcgg
     2161 tgacggtgtg gtgccagttg cgcgggggtc ccaaggacac gcaacgcgca gtatttcaac
     2221 cggtgatgtt cgcaaccttc gtgatgagcg cagtttcgtt cgccgtcgcc caagcgttta
     2281 cggtccagac gctccagtta tatgcgctgg cccttcccgt actgatcgcc ggcatctggt
     2341 gtggcttcag cctgtacgga aaattgggtg acgcggcatt ccgcaaaacc atcctgttgc
     2401 tgttgctggt ggcgggggta tcgttgatcg tgcccatacg ctgacgtaat atgaaagacg
     2461 tggggccaac gacggtcgcc ccgcgcacca aggctcgcgg gcccaagcac cgtctccttc
     2521 gtttacggag ggggcccatg ctgtctccga gcttctcgat ttccccgaaa gacctctgga
     2581 atgcgattgc gacgcgctct gcgccgcaag tcgtcgacgt gcggcggcgc gacgcctacg
     2641 aagcatcgcc gcagctgttg ccgggcgcca tctggcgcga tgcggccaaa accgaccaat
     2701 ggatgagcga tctcgatccg gcgcgtccga ttgcaatcgc ctgcaaagcc ggccacgaaa
     2761 tgagccaaag cacggtcgcg caattgcgcg cggatggaat cgacgcgcgc cttatagacg
     2821 gcggttatga gggctgggct aaagcaggcc tgcccttcgt tgcgaaaggc gagcttgaac
     2881 ggttcgcgcc gcgtcgacca agcgtttggg tgacgcgccg acggccgaaa atcgatcgca
     2941 ttgcctgccc ttggctgatc cgccgctttc ttgatccgca ggcgcgcatc cttttcgtcg
     3001 atccggatga ggtggtcaac gtggcgcgtg aaagcggtgg cgttccattc gacatcaagg
     3061 atgtcgaact gagccatgtc ggcgaacgct gctcattcga caccatgctc cggatcttcg
     3121 gacttgaggg cgagccctcg ctggcgcgac tggcgctgat cgtgcgcggc gcggacaccg
     3181 cccggtacga catcgccgag gaagcggcgg gattgcatgc ggtttcactc gggctctcgg
     3241 cactcgccgg cgacgacgat catggcctgc ttgagcgagg ttttatcgtc tacgatgctc
     3301 tgtttgcctg gctgcgcttt gctgctgagg agcgccataa ctggccggcc aaggcggcgt
     3361 gacgggcatg gcaagttttg aaacgactgc ccgggcgagc ttcgccgagg cctttctggt
     3421 gtggctgaag a
//
LOCUS       DATDHO010000791         1839 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_336863, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000791 DATDHO010000000
VERSION     DATDHO010000791.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_336863"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..229)
                     /locus_tag="VIY07_15485"
     CDS             complement(<1..229)
                     /locus_tag="VIY07_15485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383193.1"
                     /translation="MALGEGLAHRSIWTASILAISVWAISALAICVCAIAPAAIATAA
                     ASALAIGGEITAGPRWPHSPHLAAPPRCRPYS"
     gene            508..1446
                     /locus_tag="VIY07_15490"
     CDS             508..1446
                     /locus_tag="VIY07_15490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEY6383194.1"
                     /translation="MNETVLRKLERRLGRLHARQRLGIETDHEAQIFGQGINFFHIEN
                     WYSSHSVIRTTLKLLGLYTRGRKNAEQIQVRHNHVDSKTLPNRFHGFTLLHISDLHAD
                     ISQGAMRRLNELLPGMAYDTCVLTGDYRGATFGSFDAALEILARARANLKGPVYGVLG
                     NHDSIRMVPGLEEMGIRILLNECEAISRGDEAIYLAGIDDAHYYRVDNIEKAASEIPD
                     NGFSILLSHTPEVYRQAAHAGFDLFLSGHTHGGQICLPGSIPITLSSVLPRQMGSGRW
                     NYNDMIGYTSVGVGCAIVPVRINCLPEITLHRLERI"
     gene            complement(1595..1671)
                     /locus_tag="VIY07_15495"
     tRNA            complement(1595..1671)
                     /locus_tag="VIY07_15495"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1635..1637),aa:Arg,seq:acg)
BASE COUNT          396 a          532 c          535 g          376 t
ORIGIN      
        1 ggctatacgg cctgcaacgt ggtggcgccg caagatgtgg cgaatgcggc catcgagggc
       61 ccgcggttat ttctcctccg atcgccagcg cagaggctgc agcagttgcg atcgcagccg
      121 gcgcaatcgc gcagacgcag atcgccaagg ccgagatcgc ccagaccgag atcgccagta
      181 tcgacgccgt ccagatcgac ctgtgcgcga gtccttcgcc gagcgccatg cacccgacct
      241 ccagcgcgag atcgagaggg agcacgagcg caagcggccg cgcgatccga gcgcagagtt
      301 gatgcgcaag gctgccgcca acgtcagggt ggacgtcagg cggttcaccc tgaccaagga
      361 accttcgtcc tgattggtgg acgccccgtc ccgcagaagt gaggcgcgta tatttacatg
      421 atcatcacca atcagaacga ttttgcgctg accgggatcg acttggcctg cacgtgaagc
      481 aagtgaccaa ggcagcggcg gccggcgatg aacgaaacgg tcttgaggaa gctggagcgc
      541 cggttgggtc ggctgcacgc aagacagcgc ctaggaatcg agacagatca cgaagcccag
      601 atctttggcc aggggatcaa cttttttcat attgagaact ggtattcaag ccattctgtc
      661 attcgaacga cgctcaagtt gctgggattg tatacgcgcg gtcgcaagaa cgcggagcag
      721 atccaggtca ggcacaatca tgtcgacagc aagacgctgc cgaaccggtt ccatggcttc
      781 acgctacttc atatcagcga tctacacgcg gatattagcc aaggtgcgat gcggcgcctg
      841 aacgagcttc tcccaggcat ggcctatgat acgtgcgtcc tgactggtga ctatcgcggt
      901 gcgacattcg ggtcatttga tgccgcactc gaaatcttgg cgcgggcacg cgcgaatctc
      961 aaagggccag tctacggcgt attgggaaat cacgattcca ttcgcatggt tcccggactc
     1021 gaagaaatgg gaattcggat attgctcaac gaatgcgaag ccatttcgcg cggcgatgaa
     1081 gcgatttact tagcgggcat cgacgacgcg cactattatc gggtcgacaa catcgaaaag
     1141 gcagcatccg aaattccaga caacgggttt tctatcctgc tgtcgcatac accggaagtt
     1201 taccgccagg ctgcacatgc cggcttcgac ctatttctga gtggccatac ccacggtggt
     1261 cagatctgtc tgcccgggtc tattccaatc actcttagtt cggttctgcc aaggcagatg
     1321 ggctcggggc gttggaatta caacgacatg ataggttaca cctcggtcgg tgtgggatgc
     1381 gctatagttc ccgtccgcat caattgtctt ccggaaatta ccctgcatcg tctcgaacgc
     1441 atctgatcag catcacgaac gtgcactcca tcagcacctc gggttcgcga taacggcgaa
     1501 cccctccaat tatctgttgc agtgctaaac ggaaatttta gtctggggtc gttgcggatc
     1561 gatcttgaaa tcaattgtgc ttgaagacgt tagctggcgc gcccgaagag attcgaactc
     1621 ctgaccccca gattcgtagt ctggtgctct atccagctga gctacgggcg cttttaccgc
     1681 ggtccgggga cgcctcttgc ggccccacgg cggatcggcc gccttagcta tagtctcggc
     1741 cgcggcttgg caagcggctg cggcttccgc cgcctctcaa ggccagggtc ggccgggatg
     1801 acagcatcac cggctcacct gcgcctgaat cgcaaagag
//
LOCUS       DATDHO010000792         2577 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_386247, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000792 DATDHO010000000
VERSION     DATDHO010000792.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_386247"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(44..178)
                     /locus_tag="VIY07_15500"
     CDS             complement(44..178)
                     /locus_tag="VIY07_15500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383195.1"
                     /translation="MNYVLFSFREEIMFRAVVEEAAALASISLFLGMIAVWAQVLGAL
                     "
     gene            complement(254..973)
                     /locus_tag="VIY07_15505"
     CDS             complement(254..973)
                     /locus_tag="VIY07_15505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383196.1"
                     /translation="MVEHEQPQPRQKEDTPVLFLHDIERQYRQGDETLRVLNGIELAL
                     WSGQSVALVAPSGAGKSTLLHIAGLLEHPDRGDVYIDGQATSILADHQRTRIRRNEIG
                     FVYQSHHLLPEFSALENVVLPQMIRGLARSEAKSRATELLDYLGLGARLNHRPSELSG
                     GEQQRVAIARAVANAPRILLADEPTGNLDLHTAEHVFHALSQLVKASGLAAIIATHNM
                     DLAARMDRRVTLREGKILEMA"
     gene            complement(999..2267)
                     /locus_tag="VIY07_15510"
     CDS             complement(999..2267)
                     /locus_tag="VIY07_15510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEY6383197.1"
                     /translation="MTEPQGTRAFSPFEWMLSLRYLRARRKEGFISVIAGFSFLGIML
                     GVATLIIVMAVMNGFRKELLDKILGLNGHLLIQPLEKPLTDWEEVASRVAGVQGIRLA
                     APIVEGQALASSPFNASGVLIRGIRLMDLEKLPSIANNIKQGSVKGFDDEQGVAIGRR
                     LADQLSLRSGDNITLVAPRGAVTPMGTTPRIKVYKIAAVFEIGMSEYDNAMVFMPLKE
                     AQAYFNRAGDVTAIEVYTDNPDRVDRYRKVVQDAALRPIFMIDWRQRNATFFNALQVE
                     RNVMFLILTLIVLVAALNIVSGLIMLVKDKGQDIAILRTMGATQGAIMRVFLITGASI
                     GVVGTIVGFMLGVVVCLNIESIRQFLSWLTNTELFSPELYFLSRLPAEIDSGETTAVV
                     IMALVLSLLATLYPSWRAARLDPVEALRYE"
     gene            complement(2443..>2577)
                     /locus_tag="VIY07_15515"
     CDS             complement(2443..>2577)
                     /locus_tag="VIY07_15515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="His/Gly/Thr/Pro-type tRNA ligase C-terminal
                     domain-containing protein"
                     /protein_id="HEY6383198.1"
                     /translation="LIGVPYQVLVGPRGLAEGKVEVKKRADGSRETMTPGAALDLLAK
                     "
BASE COUNT          569 a          784 c          736 g          488 t
ORIGIN      
        1 tccaagcaca cgcagatgac gccgatgcgt cgcctgcgcg cgctcaaagc gcgcccagaa
       61 cctgggccca gacggcgatc atgccgagga aaaggctgat ggaagcgagc gcggcggctt
      121 cttcgacgac ggcacgaaac atgatctcct ccctgaacga aaagagaaca tagttcattg
      181 tttgttctcg agtcaagcag ccagttgtct gcgcagaaac catcagactc tcaatggctt
      241 gtattggccg gacctaggcc atctccaaga ttttgccctc gcgcaaggtt acgcgacggt
      301 ccatgcgggc cgcgaggtcc atgttgtggg tggcaatgat ggcggccagt ccggaagctt
      361 tcacgagttg agacaaagcg tggaagacgt gctccgcggt gtgaaggtcg aggttgccgg
      421 ttggctcgtc cgccaagagg atgcgcggcg catttgcgac cgcgcgcgca atcgcaaccc
      481 tctgctgctc gcctcccgat agctctgacg gccgatggtt gagccgtgcg ccaagaccga
      541 gatagtcaag caattcggtc gcccggcttt tagcctcgga acgcgccagt ccgcggatca
      601 tttgcggcag caccacgttt tcgagcgcgg aaaattcagg cagcaggtga tgggactgat
      661 aaacaaagcc gatctcattg cgccgaatac gggtacgctg atgatcggcc aaaatcgaag
      721 tcgcctgtcc gtcgatgtaa acgtcgccgc gatcgggatg ctcaagcaat ccggcgatgt
      781 ggagcagtgt cgactttccg gcgcctgagg gcgcgaccaa cgcgaccgac tgcccgctcc
      841 agagtgcaag ctcgatgcca ttgagcacgc gcagggtttc gtcgccctgc cggtattgcc
      901 gttcgatgtc gtgcaggaaa aggacgggag tgtcctcttt ttggcgcggt tgcggttgct
      961 cgtgctcaac catttccatc ctgacggcag tagacgtctt attcatagcg caacgcctcc
     1021 accggatcga ggcgcgccgc ccgccaggat ggatagagtg tggcgagcag cgaaagcaca
     1081 agtgccatga tcacgaccgc cgtcgtttca cccgaatcga tctcagccgg aagacgcgac
     1141 aggaagtaga gctcgggcga aaacagctcc gtattcgtga gccaggagag gaattgcctg
     1201 atgctttcga tgttgagaca aacgactacg ccaagcataa atcccacgat ggtcccgacc
     1261 acgccgatgg aagctccggt gatcaggaac acgcgcatga tcgcaccttg ggtcgcaccc
     1321 attgtgcgca ggatggcaat gtcctgcccc ttatccttga ccagcatgat caagccagaa
     1381 acgatgttga gcgcagcgac cagcacgatc agcgtcagaa taaggaacat cacgttccgc
     1441 tcgacctgca gagcattgaa gaacgtcgca ttgcgctgtc gccaatcgat catgaagatc
     1501 ggccgcaggg ctgcgtcctg cacgaccttg cgataccgat cgacgcgatc aggattatcg
     1561 gtatatacct cgatcgcagt gacatcgccg gcacgattga aataagcctg cgcctccttg
     1621 agcggcatga acaccatggc attgtcgtat tcggacatgc cgatctcgaa gacggccgca
     1681 atcttgtaaa ctttgatgcg cggcgtcgtc cccatcggcg tgaccgcgcc acgcggtgcg
     1741 acgagcgtga tattgtcgcc tgaacgcagc gaaagctggt cggcaagcct ccgcccgatt
     1801 gcgactccct gctcgtcgtc aaaccctttc accgacccct gcttgatgtt gttggcgatg
     1861 gacgggagct tctccagatc catcaggcga atgccgcgaa tcaacacgcc gctggcattg
     1921 aacggagacg acgcaagcgc ctgaccctcg acaatcggcg cagcgagcct aatcccctgt
     1981 acgccggcga cgcgcgacgc cacctcctcc caatcagtca agggcttttc cagcggctgg
     2041 atcaacaaat gcccgttcag gccaaggatc ttgtcgagca gctctttccg gaatccattc
     2101 atcaccgcca tcacgatgat tagtgtcgcc accccgagca tgatgcccag gaacgaaaac
     2161 ccggcgatca ccgagatgaa tccttccttg cgccgcgctc gcaggtagcg cagcgacaac
     2221 atccactcga acggggagaa ggcccgcgtc ccctggggct cagtcattga cgatgtgttc
     2281 ccacgcccga cttttcatac aaattctggc ggattcgtgc caagggcgcg agagcaaagc
     2341 ccttggcaac acacaggatt attggcttgc agcggcccag cgaagcggtc ctgaaatgca
     2401 caataacgcg ggggaagcgg cttcgtctcg cggaaatggc aattactttg ccaacaaatc
     2461 gagcgctgcc ccgggagtca ttgtctctcg gctgccatcg gcgcgtttct tgacctcgac
     2521 cttgccctcc gcaagaccac gcgggccaac caatacctga tagggaaccc caatcag
//
LOCUS       DATDHO010000793         2135 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_38002, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000793 DATDHO010000000
VERSION     DATDHO010000793.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2135
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38002"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..173)
                     /locus_tag="VIY07_15520"
     CDS             complement(<1..173)
                     /locus_tag="VIY07_15520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase"
                     /protein_id="HEY6383199.1"
                     /translation="MTAIDFSSFVDQLATASGDTILPFFRTALAIENKKVGGFDPVTA
                     ADRAAEQAMRVVIR"
     gene            complement(493..1380)
                     /locus_tag="VIY07_15525"
     CDS             complement(493..1380)
                     /locus_tag="VIY07_15525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-formylglutamate amidohydrolase"
                     /protein_id="HEY6383200.1"
                     /translation="MSEIRDELDPPFEVLEPAPWQGPVMFNSPHSGSTYPRHFLASCR
                     LDIATLRRSEDSFVDELIAGVVREGFPMMRAHFPRCFVDVNREPYELDPRMFEGRLPS
                     YANTRSMRVAGGLGTVARVVGDAQEIYDQRIPVDDALRRIESLYKPYHRTLRRLFTRM
                     HREFGAAVLIDCHSMPSTAGHRDERPRPEFVLGDRYGTSCVGAVAETVEKTLRALGYT
                     VSRNKPYAGGFITEHYGNPAAGLHAIQLEINRALYMDERRYQRSSTFSRLAADMETVA
                     RRLGEIPLEQLRPYRAAAE"
     gene            1571..1930
                     /locus_tag="VIY07_15530"
     CDS             1571..1930
                     /locus_tag="VIY07_15530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6383201.1"
                     /translation="MSKILLAEDDTDMRRFLVKALQNAGFEVTSYDNGLAAYHRLREE
                     PFELLLTDIVMPEMDGIELARRAAELDPDIKIMFITGFAAVALNADSNAPRQAKVLSK
                     PIHLRELVNEVQKMLAA"
     gene            1990..2064
                     /locus_tag="VIY07_15535"
     tRNA            1990..2064
                     /locus_tag="VIY07_15535"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2022..2024,aa:Val,seq:gac)
BASE COUNT          420 a          628 c          637 g          450 t
ORIGIN      
        1 cggatgacga cgcgcatggc ctgctcggca gcccggtcgg ccgccgtgac cgggtcgaaa
       61 ccgccaactt ttttgttttc gattgccagg gccgtacgga aaaatgggag gattgtatcg
      121 ccggaagcgg tggcgagctg atcaacgaag ctgctgaaat cgatggccgt catgtttctc
      181 ttcggcctat cggagagttg gtttgccagc aaccaagcac acccgcggac ccaaacccgt
      241 taaatgattt gtccccatcc tgttgcagtg cggagttcca tttcactatt ttttgcattc
      301 caccgatcga tggagcctga aattggacac cagccatgcg ataacagcat ggggaaagcg
      361 gctttgatcc ttgatttttg tgcaacgcga tgtagcttat tgcagtgcag tagcgagagc
      421 tactgctgcc ctccttgggc gtttcctccc tagacttggg ccgctcgcac ccgctagcgg
      481 cccttttttt atctactcgg cggcggcgcg atagggtcgc aactgctcca aagggatttc
      541 gcccaggcgc cttgccactg tctccatgtc ggctgccagg cgactgaatg tcgaggatcg
      601 ctgatagcgc cgctcgtcca tataaagcgc gcgattgatc tcaagctgga tggcgtgcag
      661 ccccgcagcc ggattgccgt agtgctcggt gataaatccg ccggcgtagg gcttgttacg
      721 actgaccgta tacccgagcg cgcgcagcgt cttttcgacc gtctctgcca ctgccccgac
      781 gcagctggtg ccgtaacggt ctcccaggac aaattcgggc cgcggccgct cgtcccgatg
      841 accggcggtc gagggcatgg aatggcaatc gataagcacg gcagcgccga actcccggtg
      901 catgcgcgtg aacagccgtc gcaacgtgcg atgataaggc ttgtataggc tctcaatccg
      961 gcgcaaagcg tcgtcgacag ggattcgctg gtcatagatt tcctgcgcat cgcccaccac
     1021 tcgcgccacg gtccctaggc cgcccgcaac ccgcattgag cgcgtattgg cataggaggg
     1081 caggcgcccc tcaaacatgc gcggatcgag ctcataaggt tcgcggttca cgtccacgaa
     1141 gcagcgcggg aaatgcgcgc gcatcatggg aaaaccctcg cggacaacgc cggcaatcag
     1201 ctcgtcgacg aaactgtctt ccgagcgacg cagcgtcgct atgtcgagcc ggcaagatgc
     1261 cagaaaatga cgcggataag tcgagccgct atggggggaa ttgaacataa ccggcccctg
     1321 ccatggcgcg ggctcaagga cttcgaacgg cgggtcgagt tcgtcgcgga tttcactcat
     1381 agggcaaaaa ccatagggaa gcttgatttc cttgagttgg ttgcggggtt taatgccccc
     1441 ttataccgtc tattgttcat ggctgggcca caaagccaag tcatgctttt ggttcactcg
     1501 ttgtttaccg ggcataagtc ttaatcggcc ggtggaatcg gccagggcgg tcggtcgggg
     1561 tgttgcgtac atgtcgaaga tcctgctggc tgaagacgac acggatatgc ggcggtttct
     1621 ggtcaaggcg ctgcagaacg ccggcttcga agtcacgtca tatgacaacg gcctggccgc
     1681 ctatcaccgc ctgcgtgagg aacctttcga gctgctgctc accgacatcg tgatgcccga
     1741 aatggacggc atcgagcttg cgcgccgtgc cgccgaactc gatccggaca tcaagattat
     1801 gttcatcacc ggtttcgcgg cggtggccct caatgccgat tccaatgcac cgaggcaggc
     1861 gaaggtattg tccaagccga tccacctgcg cgagctggtc aacgaagtgc agaaaatgct
     1921 tgcggcctaa cgcgcttttg cgcggggttg cctctccggg tcggagccga tagatcaatc
     1981 ctggttgaag ggtgcgtagc tcagcggaag agcactacct tgacatggta ggggtcacag
     2041 gttcgatccc tgtcgcgccc accatccttt gtcggattcc gatcgcggct cgcttcgctc
     2101 gcccccgcgc gcacgccgcg ggaattgaca acgct
//
LOCUS       DATDHO010000794         2716 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_337189, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000794 DATDHO010000000
VERSION     DATDHO010000794.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2716)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2716)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2716
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337189"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..433
                     /locus_tag="VIY07_15540"
     CDS             <1..433
                     /locus_tag="VIY07_15540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6383202.1"
                     /translation="WLGLGIWSKVALGFTLVFFIVFFNVYQGVKEVSPTVLANARMLG
                     MSERQLMRHVYWPSALSWMFSSLHTSVGFAVVGAVVGEYLGAAAGLGYLIQQAEGVFD
                     VAGVFAGMLVLATFVIVIDTIVSIVERRLLVWRPTAAESRP"
     gene            589..1611
                     /locus_tag="VIY07_15545"
     CDS             589..1611
                     /locus_tag="VIY07_15545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383203.1"
                     /translation="MPAMFRRLAATVAALMLSSGLALAQSKVTLAVGGGSCLCYLPTM
                     LAQALGEYQKAGVNVEIVDFKGGSESLKAVIGGSADVVSGYFDHTVNLAAKGQHLQSF
                     VVYDRYPGFALVVSPKQTSAINSIKDLANKKVGVSAPGSSTDFFLKYMLSKNGVDPNS
                     VGVIGVGLGATAIAAIEQGSIDAAIMLDPAVTILQGKNKDLKILSDTRSQKDTLAVFG
                     GEYPGGALYTRAEWIASHEKEVQAMTNAIIATLKWIHSHTPEEIADKMPANLVGPDKA
                     QYIAALKNTMPMYSETGRMDPKGAVAVLAVFSQSSPDVAKANIDLSKTYTNKYVDAAN
                     KTTGMK"
     gene            1816..2670
                     /gene="pdxY"
                     /locus_tag="VIY07_15550"
     CDS             1816..2670
                     /gene="pdxY"
                     /locus_tag="VIY07_15550"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008478 - pyridoxal kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009443 - pyridoxal 5'-phosphate salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HEY6383204.1"
                     /translation="MNILSIQSHVAYGHVGNAAAVFPLQRIGVEVWPIHTVQFSNHTG
                     YGSWKGRVFDAGMIGDLIAGIEQRGVLGECDGVLSGYMGSADIGAAILDAVATVKRAN
                     ASAKYCCDPVIGDVGRGIFVSEGIPEFMRTKAVSAADFVTPNQFELDYLSRRASGTLR
                     EARDAVKAVHDIGPRAILVTSLHTQDTPEDCIDLLASDAGACFMVRTPRLPLVVNGAG
                     DAIAALFFAHFLRTAEIGEALSRAASAIFGVLAKTVEAGGQEIQLIAAQDEFVQPSRL
                     FEARDLGR"
BASE COUNT          527 a          788 c          832 g          569 t
ORIGIN      
        1 ttggcttggc ctcgggatct ggtcgaaggt cgcactcggc ttcaccctgg tgttcttcat
       61 tgtgttcttc aacgtctatc agggcgtgaa agaggtcagc ccgaccgtgc tcgcaaatgc
      121 gcgcatgctc ggaatgagcg agcgccaact gatgcgccat gtctactggc cgtcggcatt
      181 gtcctggatg ttctcctcgc tgcacacttc ggtcggcttt gcggttgtgg gcgcggtcgt
      241 tggcgagtac ctgggcgcgg ccgccggcct aggctacttg atccagcagg ccgagggcgt
      301 attcgacgtg gcgggagtgt tcgccggcat gcttgtgctt gcaactttcg tgatcgtgat
      361 cgacaccatt gtcagcatcg tcgagaggcg cctcctggtc tggcgcccca cggccgctga
      421 gagcagaccc tagggaactg tggtcaccac actcttgtca cacccgccct tggcgggaat
      481 ccgaacggag tcgatattgt cacccaaagt gagccctagt cagtgactgc acactggcct
      541 atcgtttcga tgagccctac gaaaaagact ttatcaatgg aggaaatcat gcccgcaatg
      601 ttccgacggc ttgccgcgac ggttgccgcg ctcatgctgt cgagcggtct tgcgctcgcg
      661 caatccaagg tcacgctcgc ggtggggggc ggcagttgtc tgtgctatct gcccacgatg
      721 ctggcgcagg cgctgggcga atatcagaag gccggcgtca atgtcgagat cgtcgatttc
      781 aagggcggtt cggaatcgct caaggccgtg atcggcggca gcgccgacgt cgtatccggt
      841 tatttcgatc acaccgtgaa cctcgccgcc aaaggacagc acctgcagtc cttcgtggtt
      901 tatgaccgtt atcccggctt tgccttggtg gtctccccga agcagacgtc ggcgatcaat
      961 tcgatcaagg accttgccaa caagaaggtc ggcgtcagcg ctcccggctc ttccaccgac
     1021 ttcttcctca aatacatgtt gagcaagaac ggcgtcgatc cgaattcggt cggcgtgatc
     1081 ggtgtcggac tcggcgcaac tgctattgcg gcaatcgagc aggggtctat cgatgcggcc
     1141 atcatgctcg atccggcggt caccatcctg caaggcaaga acaaggactt gaagattctc
     1201 agcgatacgc gcagccagaa ggacacgctg gcggtgtttg gaggcgaata tccgggcggc
     1261 gccctctaca cgcgggctga gtggatcgcc tcgcatgaaa aagaagtgca ggcgatgacc
     1321 aatgcgatca tcgcaacctt gaaatggatc cattcgcata ccccggagga aatcgccgac
     1381 aagatgccgg cgaacctcgt cggcccggac aaggcgcaat acattgctgc actcaagaat
     1441 acgatgccga tgtattcgga aaccggccgc atggatccca agggcgccgt cgcggtgctc
     1501 gcagtgttca gccagtcgtc accggacgtg gcgaaggcca atatcgatct gtcgaagacc
     1561 tacaccaaca agtacgtcga cgcggcgaac aagacgaccg ggatgaagta ggttcaattc
     1621 agatcaggct ttccacacgt tgcgtcatgg ccgggcttgt caccgcaagt cgggtatacc
     1681 cgacttgcgg caggtaactg tttttgcgca actcgggcag gcccgagttg cgcgtgccat
     1741 ccacgtcttg ggatatgctc aagacgtgga tgcccggcac aaggccgggc atgtcgatag
     1801 cagaccattg cctcgatgaa tattctgtct atccagtcgc acgtcgctta cggacacgtc
     1861 ggaaatgcgg ccgcggtatt tccgctgcaa cggatcgggg tggaggtctg gcccatccac
     1921 accgtgcaat tctccaacca taccggttat ggcagctgga agggccgcgt ctttgatgcc
     1981 ggcatgatcg gcgatctgat agcgggcatc gagcagcgcg gcgtgctcgg cgaatgcgac
     2041 ggcgtcctgt cgggttatat gggctcggcc gacattggtg cggccattct cgatgccgtg
     2101 gcgactgtaa agcgcgcgaa tgcgtccgcg aaatattgct gcgatccggt cattggggac
     2161 gtgggtcgtg gaatctttgt cagcgaaggc attccggagt tcatgaggac gaaggccgtt
     2221 tccgccgccg acttcgtcac gcctaaccag ttcgagctgg actacctcag caggcgtgcc
     2281 agcggaacgc tgcgcgaggc tcgcgatgcc gtcaaagccg tccatgacat cggtccgcgc
     2341 gcaatccttg tcacttcgct gcacacgcaa gatacgccgg aagattgcat cgatcttctc
     2401 gcctcggacg cgggcgcttg cttcatggtc cgtaccccgc ggctgccgct ggtagtaaat
     2461 ggcgcaggcg atgccatcgc ggcacttttt ttcgcgcatt tcctacggac cgcagagatt
     2521 ggcgaggcgc tgtcgcgcgc agcttcggca atattcggcg tgctggcgaa aaccgtcgag
     2581 gcgggagggc aggaaattca gctcattgca gcgcaggacg aattcgtgca gccaagccgc
     2641 ctcttcgaag caagagatct tggtcgatga agggggcgcc atcgatcttt catatcggcc
     2701 ggctcgatct ttcgtt
//
LOCUS       DATDHO010000795         4163 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_480710, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000795 DATDHO010000000
VERSION     DATDHO010000795.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4163
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_480710"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VIY07_15555"
     CDS             complement(<1..216)
                     /locus_tag="VIY07_15555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase family
                     protein"
                     /protein_id="HEY6383205.1"
                     /translation="MILEIAQIDVKPGMEAEFEAGVKKAAPIFKRAKGCKFMTLQRSH
                     EMPQRYRLFVQWETLENHTKDFRESPDF"
     gene            complement(283..2130)
                     /locus_tag="VIY07_15560"
     CDS             complement(283..2130)
                     /locus_tag="VIY07_15560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383206.1"
                     /translation="MFRFFETSLAPTAVPDSAEPPSGLAAFYWHFARQAKALFVGLFA
                     IGLVVALLDVMIPVFIGKVVTLVTESRPETLLATSWPWLVGMAIVLLVLRPAAFTIQH
                     LLINQAIAANVSNRIRWQNHWHVSRQSWTFFQNDFAGRIATRVMQTGPAIRESLVSLL
                     TAVWFIMIYGTSSLILLASADRWLALPVLLWFAGYVAMLRYFVPRMQNKSKVMSEARS
                     MLTGRIIDTYTNIVTVKLFARANDEDAYVREAVDHHTGRFHESLRLNTLFALTLILLN
                     ALLITGTGAFAIILWRHGHVGVGTVAMALPMTTQIISASHWVAWQVTDIFENVGVVQE
                     GMMTIARPIALSDRPDARTLKIIRGEIRFEDIRFGYGRQSGLIDGLTLDVRPGEKIGL
                     VGRSGAGKSTLVNLLLRFFDLESGRILIDGQDIAAVSQESLRTQISMVTQDTSLLHRS
                     ISDNIRYGRPDASELEIIAAAQMAHAHEFIVDLEDWKGRRGYDAHVGERGVKLSGGQR
                     QRVAIARVILKDAPILVLDEATSALDSEVEAAIQSSLGTLMQGRTVIAIAHRLSTIAQ
                     MDRLIVLDRGRIVEQGTHDELLGLNGHYATLWRRQSAGFIDVADQQAAE"
     gene            complement(2258..2977)
                     /locus_tag="VIY07_15565"
     CDS             complement(2258..2977)
                     /locus_tag="VIY07_15565"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6383207.1"
                     /translation="MERKTILMIDFYALTSPNVQKIFVMLEECGLPYNIKPVDVWAGE
                     QFTPEFTKINPLLKVPAIVDSDGPGGKPYTVIESGAILIYLAEKTGKFIPHEPVARYD
                     TFQWVILQVANVGPMAGQHVHFSKFAGPGNDYSASRYRTQVLNLFDIYEQRLSARPYV
                     TSNEYTIADIAAWPWLRNFELLAIDPAKYPKIKSWADKIASRDAVKRALAQVGTLKSI
                     RDKASDDQKDRFFGRGKYARA"
     gene            complement(3036..3338)
                     /locus_tag="VIY07_15570"
     CDS             complement(3036..3338)
                     /locus_tag="VIY07_15570"
                     /inference="COORDINATES: protein motif:HMM:NF025733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich CWC family protein"
                     /protein_id="HEY6383208.1"
                     /translation="MGMSFIGHTTDSPPPCDNLAFADGRAQAQRMTTATSPRRISCAR
                     CGMSFECGFSAECWCVGEPYRVPMTKAWLEDCLCPACLRKAAAALADSRREAEQGR"
     gene            3326..3589
                     /locus_tag="VIY07_15575"
     CDS             3326..3589
                     /locus_tag="VIY07_15575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SemiSWEET transporter"
                     /protein_id="HEY6383209.1"
                     /translation="MTFPWIIDLLGAAGALLTTACWLPQMLKILREKEARALSLPATG
                     SFTLGIMLWLVYGIAINDWPLIGSNAVTLALMAPILTLKLRYG"
     gene            complement(3598..>4163)
                     /locus_tag="VIY07_15580"
     CDS             complement(3598..>4163)
                     /locus_tag="VIY07_15580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383210.1"
                     /translation="RTAQHWPSLWSLRASSGSAKMAIVPTSVNQGTDNLGTALGLNNK
                     DSAGWDMLASFADDPTGSPSPEHKGAICAPADPTFDAKAFNDLMQATKTDPDEWAYPV
                     SADVEVRATPQPGGAMIDKLPLGFVRVMPENAPNLPAFLRIVTPTGKTGYVSVDSLAP
                     IGNDQICYVRDASGWKIGGYIGGGDSQ"
BASE COUNT          839 a         1239 c         1239 g          846 t
ORIGIN      
        1 aaaatcggga gactcccgga aatccttggt atggttttcc agcgtttccc attgcacgaa
       61 cagccggtag cgctgcggca tctcgtggga gcgctgcaag gtcatgaatt tgcagccttt
      121 ggcgcgcttg aaaatcggcg cggccttttt cacgcccgct tcgaattcgg cttccatgcc
      181 gggctttacg tctatttgtg caatctcaag gatcatggtg tggccttcgc ggagaggagc
      241 ggcattatgg tctgcgcaca ccaaagtgaa aagaggacgc agctattcag ctgcctgctg
      301 atcggcgacg tcgatgaagc cggccgactg gcgccgccac aatgtagcgt aatggccgtt
      361 gaggccaagc agctcgtcat gcgtgccctg ttcgacgatg cggccgcggt cgagcacgat
      421 cagccggtcc atctgggcga ttgtggacag acggtgagcg atggcgatca ccgtgcggcc
      481 ctgcatgagc gtaccaaggc ttgattggat ggcagcctcc acctcgctgt ccagcgcaga
      541 ggtggcctca tcgagcacaa ggatgggcgc gtccttcagg atgacacgag caatcgccac
      601 gcgctgacgc tgcccacctg aaagcttcac gccgcgctcg ccgacatgcg catcgtaacc
      661 gcggcgtcct ttccaatcct ccaggtccac gatgaattca tgcgcatggg ccatctgggc
      721 tgccgcaatg atttcaagct cgctcgcatc cggacgaccg tagcggatat tgtcgctgat
      781 tgaacgatgc aacagagacg tatcctgagt gaccatggag atttgcgtgc ggaggctttc
      841 ctgagaaacc gcggcgatgt cctgtccgtc gatcaggata cgcccgcttt ccagatcgaa
      901 gaaccgcaac agcaaattga ccagcgttga cttgccggct cccgagcggc cgaccaagcc
      961 gattttttcg ccgggcctta catcaagggt caggccgtct ataagcccgc tttggcggcc
     1021 atagccgaaa cggatgtcct cgaaccggat ttccccacga ataatcttga gcgtgcgggc
     1081 atccggccga tcgctgagcg caattggccg cgcaatcgtc atcatgcctt cctgcacgac
     1141 gcccacattc tcgaaaatgt ccgtaacctg ccaggctacc caatgagacg cactgatgat
     1201 ctgcgtcgtc atcggcaagg ccatggccac cgttccgaca cccacgtggc catggcgcca
     1261 caagatgatc gcgaatgcgc ccgtacctgt gatcagcaaa gcgttcagca ggatcaaggt
     1321 gagcgcgaat aacgtgttga gccgcagcga ttcgtggaaa cggccggtat ggtgatcgac
     1381 cgcctctcgc acgtaggcat cctcgtcgtt cgcgcgtgcg aacagcttca ccgtaacgat
     1441 gttggtgtat gtgtcgatga tgcggcccgt cagcatcgag cgcgcttcgg acatcacctt
     1501 tgatttgttt tgcatgcgcg gcacgaaata ccgcagcatt gcaacatagc cggcgaacca
     1561 cagcagcacg ggcaacgcca gccaacggtc tgcggatgcc agcaagatta gcgacgatgt
     1621 gccgtaaatc atgatgaacc atacggccgt aagcagtgag acgagacttt cacggatcgc
     1681 tggtccggtc tgcatcacgc gcgtggcgat gcgacctgcg aaatcgttct ggaagaatgt
     1741 ccacgactga cgcgacacgt gccagtggtt ttgccaacgg atgcgattgg atacgttggc
     1801 cgcaatcgcc tggttgatca gcaaatgctg gatggtgaac gccgccggac gcaagaccag
     1861 caggacgatc gccatgccga ccagccacgg ccaggaggtc gccagcagcg tttccggcct
     1921 gctttccgtc accagcgtca ccaccttgcc aatgaagacc ggtatcatca cgtcgagcag
     1981 cgcaacgact aggccgatgg caaacaggcc aacgaacagc gctttcgcct gccgggcgaa
     2041 atgccaatag aaagcggcca ggccggacgg tggctctgca ctgtctggca ccgcggtcgg
     2101 cgcgagtgac gtctcaaaaa agcgaaacat tatccactca atacggctgc gcgcgattcc
     2161 gagggcctcg cgcggggtcg tctctgcaag attagattcg gcgtgaacct aaggtcgcat
     2221 cgtgacgaca gcgtggcaat gcttcgatgc agatggttca cgcgcgggcg tattttccac
     2281 gcccgaaaaa acgatccttc tggtcgtcgg aggctttatc ccggatcgat ttcagcgtgc
     2341 cgacctgtgc gagcgcccgc ttgactgcgt cgcgcgatgc gatcttgtcc gcccaggact
     2401 tgatttttgg atatttggca gggtcgatgg caagcagttc gaaattgcgc agccatggcc
     2461 atgccgcgat atccgcgatg gtgtattcat tgctggtgac gtaagggcgt gccgataacc
     2521 gttgctcgta gatgtcgaac aaattgagca cctgagtgcg atagcggctg gcgctgtaat
     2581 cgttgccggg accggcaaat ttgctgaaat gcacatgttg ccccgccatg gggccgacgt
     2641 ttgcgacctg aaggatgacc cattgaaacg tgtcgtatcg agcgaccggt tcgtgcggaa
     2701 tgaacttgcc ggtcttctcg gcgaggtaga tcaggatcgc gcccgactcg atcaccgtgt
     2761 aaggcttccc gcctggtcca tcgctgtcga cgatcgccgg cactttcagc agcggattga
     2821 tcttggtaaa ttcgggcgtg aactgctcgc ccgcccacac gtcaacgggt ttgatattgt
     2881 agggcagccc gcattcctcg agcatgacga agatcttctg cacgttcggg ctggtcagcg
     2941 cataaaagtc aatcatgaga attgtctttc gttccatggc cgcggactgc ggcggcccct
     3001 cctatagagg aacgcaggtc acctgtcttg ttgcgctaac gcccttgttc tgcctcgcgc
     3061 ctgctgtccg caagcgcggc cgccgccttg cgcaggcaag cggggcacag acagtcctca
     3121 agccaggcct tggtcatggg cacccggtag ggttcgccaa cgcaccagca ctcggcagaa
     3181 aatccgcatt cgaacgacat accgcatcgg gcacagctga tacggcgagg ggaggttgcg
     3241 gttgtcatcc gctgagcctg cgcgcggccg tcggcaaagg caagattgtc acacggcgga
     3301 ggcgaatcag tcgtatggcc gatgaatgac attcccatgg atcattgatc ttcttggcgc
     3361 cgcgggcgcc cttctcacca cggcgtgttg gctgccacag atgctcaaaa tcctgcgcga
     3421 aaaggaggca agagcgctgt cgctgccggc gacgggctcg ttcaccttgg ggatcatgct
     3481 gtggctcgtg tacgggatcg ccattaacga ctggccgctg attggctcga acgctgtgac
     3541 cctcgccctg atggcgccga tcctgaccct caaactgcgc tatgggtgaa gcgtcgacta
     3601 ttgggaatcg cccccgccga tatagccgcc gattttccag ccactcgcat ccctgacata
     3661 gcagatctgg tcgttgccga tcggcgcgag ggagtcgaca gacacgtaac ccgtcttgcc
     3721 ggtcggcgtg acgatgcgca ggaacgcagg aagattgggt gcgttctccg gcatgacgcg
     3781 cacgaaccca aggggaagct tatcgatcat ggctccgccc ggctggggtg tggcgcgcac
     3841 ctcaacgtcc gcggaaaccg ggtaggccca ctcgtccggg tcggtcttcg tggcctgcat
     3901 caagtcattg aatgccttcg catcaaaggt cggatcggct ggcgcgcaaa tcgcgccttt
     3961 atgctcaggt gagggagagc ccgtcggatc gtccgcaaaa ctcgcaagca tgtcccaccc
     4021 ggcgctgtcc ttgttgttca ggccaagcgc cgtgccgaga ttgtctgtgc cctgatttac
     4081 gcttgtcggc acgatcgcca ttttcgcgct cccagaagaa gccctgagcg accacaagct
     4141 tggccaatgc tgcgcggtcc ttt
//
LOCUS       DATDHO010000796         4851 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_435945, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000796 DATDHO010000000
VERSION     DATDHO010000796.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4851
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_435945"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..606
                     /locus_tag="VIY07_15585"
     CDS             <1..606
                     /locus_tag="VIY07_15585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-6-phosphate synthase"
                     /protein_id="HEY6383211.1"
                     /translation="LLTRFPKLKHRLSLLQIAVPSRSTIDAYRSLQHELAALVGEINA
                     KHSEIDWSPIRYITKGFCQSTLAGFYRASAVGLVTPLHDGMNLVAKEYIAAQDPSDPG
                     VLVLSRSAGAARELDTALQVDPNDIEDITRQIAAALLMSREERCTRWQNMMDVLLRHS
                     IHAWFAEFMQALKTSRPSPLAPAKVLLPATAGRAALAQPRR"
     gene            complement(692..847)
                     /locus_tag="VIY07_15590"
     CDS             complement(692..847)
                     /locus_tag="VIY07_15590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383212.1"
                     /translation="MTNKTLGLDRNEEELFIDTVSDEALEIAAGTAKEQANFTLGACS
                     GLSVCPG"
     gene            complement(902..1075)
                     /locus_tag="VIY07_15595"
     CDS             complement(902..1075)
                     /locus_tag="VIY07_15595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383213.1"
                     /translation="MSVTFMNWTNRVAITGRVAELRRVSYSSNEPMTPWDYHLPFGKT
                     EARTEALKWIWQT"
     gene            complement(1199..2449)
                     /locus_tag="VIY07_15600"
     CDS             complement(1199..2449)
                     /locus_tag="VIY07_15600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY6383214.1"
                     /translation="MTTRILVVDDEPDLEALVLQKFRHQIRDQAVSFMFAHDGVEALA
                     ALKANADIDLVVTDINMPRMDGLSLLQKLQENEENIMTVIVSAYGDMTNIRTAMNRGA
                     FDFVTKPIDFLDLEATIAKTIRHIEFLREARERQVAAERAYASLSRYFSPNLAQRLAG
                     DTAAVDLEGQRREIAMLFTDIENFTALVETLEPSVLGPLLNEYLTGMTDIVFANDGTV
                     AKIVGDALHILFGAPGEQLDHAARAVTCALSLDEFAKGFSERWQKKGIAFGITRIGVH
                     AGPAIVGNFGGGRFFDYTAYGDTINVAARLETVNKQLGTRICVSAALAEGVENFRGRP
                     IGDLELRGRGEVIRAFEPLQEKQFKGPATKSYLHAFALLEAGDAGAVAAFAAHVGKQP
                     EDRLAAFHLKRLLNGAKGTRIAME"
     gene            complement(2446..2835)
                     /locus_tag="VIY07_15605"
     CDS             complement(2446..2835)
                     /locus_tag="VIY07_15605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6383215.1"
                     /translation="MKLLILVVDDEPDVEMLFRQQFRRDLRDGRFTMEFAQSAPAALQ
                     CIGDASDASLILILSDINMPGMSGLELLPKAKAVRPDVPVIMITAYGDAETKRKALES
                     GAEALLTKPIDFVQLRSEIDTRVERAA"
     gene            complement(2832..>4851)
                     /locus_tag="VIY07_15610"
     CDS             complement(2832..>4851)
                     /locus_tag="VIY07_15610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018238842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY6383216.1"
                     /translation="KQIDVLRTFADQAVIAIENVRLFDEVQARTRDLSESLEQQTATS
                     EVLQTISSSQGELQPVFDSLLANATRLCAAKFGTLFLREGENFRVVAQHNTPHALAEA
                     RRRDPIVRAGPGTAIRRSTTAKQAIQVPDIATEPAYAERDPDRMALVKLGGYRAVLSI
                     PMLRDNEVIGAINIYRQETGVFPDKQIELVKNFAAQAVIAIENTRLLDELRRSLDQQT
                     ATAEVLKVISRSAFDVQAVLDTLVESAGRLCQAENVQIFLRDGDVYRLTAHNGFSMEY
                     QKYLKAHPIPAGRGTLVARTAARLATVHIPDVLADPEYTFHEGQKLGGYRAALGAPLL
                     REGNCIGVMSMTKSVPEPFTDKQIEIVSTFADQAVIAIENSRLFGEVQARTADLTASL
                     DNLRTAQDRLVQTEKLASLGQLTAGIAHEIKNPLNFVNNFSAVSSELIDEIGETLESV
                     KFDGKTGDQLAELMDMLRGNLEKVVQHGKRADSIVKNMLLHSRQGSGEHRPVDINAIV
                     EESLNLAYHGARAEKQGFNITLKRSFDPAAGEADLFPQEITRVLLNLISNGFYAATRR
                     KVQDGGDGYEPTLAAATKNLGDSVEIRIRDNGSGITPEVRERMFNPFFTTKPAGEGTG
                     LGLSISHDIIVKQHGGSIDVNSEPGHYTEFRIVLPRNAATLGKTGAST"
BASE COUNT          951 a         1454 c         1415 g         1031 t
ORIGIN      
        1 ctgctgaccc gatttccgaa actcaagcac cggctgtcgc tgctgcagat cgcggtgcct
       61 tcgcgctcga cgatcgatgc gtatcgctcg ctgcagcatg agctcgccgc gctcgtgggc
      121 gaaatcaatg ccaagcacag cgagatcgac tggagtccga tccgttacat tacaaaagga
      181 ttctgccaat cgaccctggc cgggttctac cgggcttcag cggtcggcct ggtcacgccc
      241 ctgcacgacg ggatgaacct ggtcgccaaa gagtacatcg ccgctcagga tccttccgac
      301 cccggcgttc ttgtgctgtc caggtcggcg ggggctgccc gcgagctcga taccgccttg
      361 caggtcgatc caaacgatat cgaagacatt acccggcaga tcgccgcggc attgctgatg
      421 tctcgcgagg aacggtgtac ccgctggcaa aacatgatgg acgtcctgtt gcgacactca
      481 atccacgcct ggtttgctga attcatgcag gcgctcaaga cgtcgcgccc aagtcccctg
      541 gcgccggcga aagttctgtt gcccgccacc gccggacggg cagcactcgc gcagccgcgt
      601 cgctaggtct catcgataaa cgaagaggtc tccggcacct caccggagac ctcgtccaac
      661 cagataattt ccggataatt ctacgaaata atcagcccgg acacacggaa aggccactgc
      721 aggccccgag ggtgaagttc gcctgctcct tcgccgtccc ggccgcgatt tcgagcgctt
      781 catccgacac agtgtcgatg aagagttctt cctcgttgcg gtcgagtccg agggtcttgt
      841 tcgtcatggc attggtcctt ctgttgttga ggtctattgg tcggagcggc ctatgtcggt
      901 ctcaagtctg ccagatccac ttcaaggcct ccgtccgcgc ttcggtcttg ccgaacggca
      961 ggtgatagtc ccacggggtc atcggttcat tcgagctgta ggacacgcgg cgcaactcag
     1021 cgacgcgtcc cgtgatagcg acccggttgg tccagttcat aaaggtgacc gacatgggtg
     1081 cctccagtca tcaaattcca caattgcaat atagggcagc taccgctgca ccactgtgac
     1141 gggggtcaca caaccgacga ttctcgaaaa atgggccgaa ctagcgggga cacacggctt
     1201 attccattgc gatccgcgtg ccctttgccc cgttcaggag ccgcttgagg tggaaggcgg
     1261 ccaggcgatc ctccggctgc ttgccaacgt gtgcggcgaa ggcggcaacc gcccccgcgt
     1321 cccccgcctc caggagggca aaggcgtgga ggtaactttt ggtggcggga cccttaaatt
     1381 gcttctcctg aagcggctcg aaggcgcgga tcacctcgcc tcttcccctc aattcaagat
     1441 cgccgatcgg ccgaccgcgg aaattctcca cgccttcggc aagcgccgcg ctgacacaaa
     1501 tgcgggtgcc gagctgtttg ttgaccgtct caagccgcgc tgcgacgttg atggtatcgc
     1561 cgtaagcggt gtaatcgaaa aacctgccgc ctccgaaatt cccgacgatg gccggcccgg
     1621 catggacacc gatgcgggtt atcccgaaag cgatgccctt tttctgccag cgctcggaga
     1681 agcctttggc gaattcatcc aatgacagag cgcacgtcac ggcgcgcgcg gcgtggtcga
     1741 gctgctcgcc cggcgcgccg aacaaaatgt gcaaggcatc tccgacaatc ttggcgacag
     1801 tgccgtcatt ggcaaagacg atgtctgtca tgccggtgag atattcattg agaaggggtc
     1861 cgagcacgct gggctccagc gtctccacga gcgcggtaaa attctcaatg tcggtaaaaa
     1921 gcatcgctat ttcccggcgc tgaccctcga gatcgaccgc tgcggtgtcg ccggcaagac
     1981 gctgggcaag gttcggcgaa aaatatcgcg acagagaggc ataggcccgc tctgcagcca
     2041 cctgccgctc gcgagcctcg cgcaggaatt cgatatggcg gatggtcttg gcgatcgtgg
     2101 cctccagatc gaggaagtcg atcggcttgg tcacgaagtc gaaggcgccg cgattcatcg
     2161 cggtgcgaat attggtcatg tcgccataag ccgaaacgat gaccgtcatt atgttttctt
     2221 cgttctcctg caacttctgc aggagcgaga gcccatccat ccgcggcata ttgatatcgg
     2281 tgacgaccag atcgatgtcg gcgttcgcct tcaacgccgc cagtgcttcc acaccgtcgt
     2341 gggcgaacat aaagctgaca gcttggtccc ggatttgatg acgaaacttc tgaagaacga
     2401 gagcctccag gtcaggctcg tcatccacga ccaggattcg agtggtcatg ctgctctttc
     2461 gacgcgcgtg tcgatctcgc tgcgaagctg cacgaaatcg atcggcttgg ttaacaacgc
     2521 ctcggcaccg ctttcaagcg ctttgcgctt cgtctccgca tcgccatagg cggtgatcat
     2581 gatcaccggt acgtcgggtc gcaccgcttt ggctttgggc aagagctcga ggccgctcat
     2641 gccaggcata ttgatgtcgg agagaatcaa aatgagtgag gcgtcgctcg catcgccgat
     2701 gcattgaagc gctgcgggcg cggactgggc aaattccatc gtgaagcggc cgtcgcgaag
     2761 gtcgcggcgg aattgctgac ggaacagcat ttcgacgtcc ggttcgtcat caacaacgag
     2821 gataagaagt ttcacgtcga tgctcctgtc ttgcctagcg tagccgcgtt tcttggaaga
     2881 acgatgcgaa actcggtgta atgacccggt tccgagttga catcaatgga tccgccatgt
     2941 tgcttgacga tgatgtcatg gctgatcgac aggccgagcc cggtgccctc gcctgcaggt
     3001 ttcgttgtga aaaacggatt gaacattcgc tccctgacct caggcgtaat tccgctgcca
     3061 ttgtcgcgaa ttcggatctc gacgctgtcg ccgagatttt tcgtcgccgc cgccagggtg
     3121 ggctcgtagc catctccacc atcctgcacc ttgcgcctgg tcgcggcgta aaaaccattc
     3181 gaaatcagat tgagaaggac gcgcgtgatc tcctgcggga agaggtcggc ttcgccggca
     3241 gccggatcga acgatcgctt aagggtgatg ttaaagcctt gtttctcggc gcgcgcacca
     3301 tggtaggcga gattgaggct ttcctcgacg atagcattga tgtcgaccgg cctgtgttcg
     3361 cccgagccct ggcgcgagtg gagaagcatg ttcttgacga tcgaatcggc gcgtttgccg
     3421 tgctgcacga ccttttcaag gttgccgcgc agcatgtcca taagttccgc tagctgatcc
     3481 ccggtctttc catcgaattt tacactttca agggtctccc cgatttcatc aatcagttcg
     3541 gaagagaccg ccgagaagtt gttgacaaaa ttgagcggat tcttgatctc gtgcgcgatg
     3601 cccgcggtga gttgcccgag cgaggcgagc ttttctgtct gcacgagacg atcctgcgcc
     3661 gtgcgaagat tgtccagaga tgcggtcaag tcggccgtgc gcgcctgcac ttcgccaaac
     3721 aatcgggaat tttcgattgc aatcaccgcc tggtcggcaa atgtgctgac gatctcgatc
     3781 tgcttgtcgg taaacggctc aggcactgac tttgtcatcg acatgacgcc gatgcagttt
     3841 ccctctcgaa gtagcggtgc cccaagcgcc gcgcggtagc cgccaagttt ctggccttcg
     3901 tggaaggtat attccggatc ggcgagaacg tcgggaatgt gaactgtcgc gagtctcgcc
     3961 gctgttcgag cgaccagcgt tcctcggccc gcagggatcg gatgcgcttt caaatacttc
     4021 tgatactcca tcgagaagcc attgtgcgcg gttaaccgat atacgtcccc gtcccgaaga
     4081 aagatctgca cattttcggc ctggcacaga cggcccgccg actccaccag cgtatccagg
     4141 acagcctgca catcgaaggc cgagcggctg atcaccttga gcacttcggc cgtcgcggtc
     4201 tgctgatcga gcgacctgcg cagctcatcg agcagcctcg tgttctcgat tgcgatcact
     4261 gcctgcgcgg cgaagttctt caccaattcg atctgcttgt cgggaaagac gcccgtttcc
     4321 tgccgataga tgttgatggc accgatcacc tcattatccc tgagcatcgg gatggaaaga
     4381 acggcgcgat agccgcctag cttgaccagc gccatgcgat ccgggtcacg ttcggcatag
     4441 gccggctctg tcgcgatatc cggcacctgg atagcctgct ttgcagtggt gctgcgccga
     4501 atggccgtgc cgggacccgc gcggacgatc ggatcgcgac ggcgcgcctc cgccagagca
     4561 tgtggcgtgt tgtgctgcgc gaccacgcga aagttctctc cctcgcgaag aaaaagggtc
     4621 ccaaactttg cggcgcagag acgcgtcgcg tttgcaagga gggaatcgaa gaccggttgg
     4681 agttcgcctt gcgacgagct gatcgtttgc agcacttccg acgtcgccgt ctgctgctcc
     4741 agcgactcgg acaggtcacg cgtgcgcgcc tgtacttcgt cgaatagacg cacattctca
     4801 atggcgatca ccgcctggtc ggcgaaagtc ctcaaaacgt cgatttgctt c
//
LOCUS       DATDHO010000797         1527 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_138719, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000797 DATDHO010000000
VERSION     DATDHO010000797.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_138719"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            282..1367
                     /gene="serC"
                     /locus_tag="VIY07_15615"
     CDS             282..1367
                     /gene="serC"
                     /locus_tag="VIY07_15615"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007114936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HEY6383217.1"
                     /translation="MSLRIFNFSAGPAVMPLPVLEQAQRELVSLPGVGMSVMEISHRS
                     KTFEDLLNCAFADIRELASVPANYRLLMLQGGASLQFSMVPMNLLLAGSTADYIDTGT
                     WADKAIKEAKRVGRVNVTGSTKADNYNRIPSPSEIKLTSDASYVHITSNNTIEGTQWH
                     TFPTTGTVPLVADASSDIFSRPIDVGRFGVIYAGAQKNLGPSGVTLVIVRDELLSRSH
                     GDLPTMLSYKVQSDNNSLYNTPNTFGVYILGLTMKWLKSLGGLAAVARMNQRKAETLY
                     AEVDRTGFYRGTAQKESRSLMNVTFRLPSEALEKEFEKAATTAGLDGLKGHRLVGGMR
                     ASIYNAFPQEGVDALVHFMREFERSKG"
BASE COUNT          312 a          469 c          446 g          300 t
ORIGIN      
        1 cttctcgatg tatcccgtcg gcgtggacga tctgatgacg attgccgatg ctggcggcat
       61 catgccgccg aagtccacat ggtttgaacc gaagctccgc gacgggctcc tggcgcatct
      121 gatctgagac tgacgtccgg ctgaccacct ccgccaaggc tacggtggtc cgccgtagct
      181 ttacgcgaag gcggaagccg gacactacgc agcgcaacgc gattgtctta cttgcactgc
      241 gttgggccgg tcctttccga cccccggtgt acgctaacgg catgtctttg cgcattttca
      301 atttctcggc tggtcccgcc gtcatgccgc tcccagtcct cgaacaagcg cagcgtgagc
      361 tcgtgtcact gcctggtgtg gggatgtcgg tcatggagat cagtcatcgt tcgaagacct
      421 tcgaggatct cctcaactgt gcctttgccg acatccgcga gttggccagc gtaccggcca
      481 actaccgtct gctcatgctg caaggcggtg caagcctgca gttctcgatg gtgccgatga
      541 acctgctgct ggcgggctcg acggccgact acattgacac cggcacctgg gcggacaagg
      601 cgatcaaaga ggccaagcgc gtcgggcgag tcaacgtcac tggatcgacg aaggccgata
      661 actacaaccg cattccttca ccgagcgaaa tcaagttgac gtctgatgcc tcgtatgtcc
      721 acatcacgtc gaacaacacg atcgaaggca cgcagtggca cacgtttcca accacaggca
      781 ctgtcccgct cgtcgccgac gcgtcatcgg acatcttcag ccggccgatc gatgtcgggc
      841 ggttcggcgt gatctatgcc ggtgcgcaga agaatctcgg tccgtccggg gtcacgctgg
      901 tgatcgtccg cgacgaactg ctgtcgcgtt cgcatggcga tctgccgacg atgctgagct
      961 acaaggtgca gtcggacaac aattcgctgt acaacacgcc gaacacgttc ggcgtctaca
     1021 tcctcggcct gacgatgaag tggttgaagt cgcttggcgg tctcgccgcc gttgcgcgga
     1081 tgaaccagcg caaggccgaa acgctctacg ccgaggtcga tcgcacaggg ttctaccgcg
     1141 gcaccgcgca gaaggagagc cgctcgctca tgaacgtgac gttccgcctg cccagcgaag
     1201 cactggaaaa agagttcgag aaggcggcca ccaccgcagg acttgacggc ctcaaggggc
     1261 atcgtctcgt gggcgggatg cgcgcgtcga tctacaacgc gttccctcag gaaggcgtgg
     1321 acgcgctcgt gcacttcatg cgggagttcg agcgctcaaa gggatagaaa tgcccaatgc
     1381 ccaatgcgca atgctcaacg tcgagtgacc attgggcatt gagcattctg cattgagcat
     1441 tgggccttat tcccgttacg ggaacgtcct gaatactcca aaattcaact tcaagaacgc
     1501 tgcgaccaac cacaatccga cggcaat
//
LOCUS       DATDHO010000798         1732 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_337398, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000798 DATDHO010000000
VERSION     DATDHO010000798.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_337398"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            672..>1732
                     /locus_tag="VIY07_15620"
     CDS             672..>1732
                     /locus_tag="VIY07_15620"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012452929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEY6383218.1"
                     /translation="MRLSRYFLPILRETPKEAEIVSHRLMLRAGMMRQEAAGIYAFLP
                     LGFRVLQKICQIVREEQNRSGAIELLMPMVQSADLWRESGRYDAYGKEMLRTKDRHER
                     EMLYGPTNEEMITEIFRAYVRSYKDVPLNLYHIQWKFRDEVRPRFGLMRGREFLMKDA
                     YSFDLDQAGATHSYNKMFVAYLRTFARMGLKSIPMRAESGPIGGNLSHEFIILAQTGE
                     SEVFCHKDYLDMPIPPANVNFDDVAGLQKIVDKWTSQYAATLEMHDAAAFGNVPADKQ
                     VSARGIEVGHIFYFGTKYSEPMKAVVATPDGKEVPVHMGSYGIGPSRLVAAIIEASHD
                     EGGIIWPEPVAPFKVAILNL"
BASE COUNT          375 a          484 c          520 g          353 t
ORIGIN      
        1 aaaaaacggt tgcccacgat ctcgtgagcg cgtgcattcg ttgcaggtac cgtcagatag
       61 acggcgagca tggccaacgg ccataaattc ttgagcatgg gggaattccg gtttttcgta
      121 atgacggaaa aagccgccgt atgcggcggc aactacgtca ggcgaaagcc ggaggaccgc
      181 gagcagacct ggagtcggcg atgacatcgc ctttgaaagc gacattcgat ggatatagga
      241 cctgcaacgt ccttgtcggt ccgaaatctg caacgagcgt cgtatcgggc gggattggcg
      301 gggcggcgac gctgcacaga ttgcaatgat cgcaaggctg cgcaggtgcc ggaaggctgt
      361 cgtcagcggt agggggcggg tgctgtcgtt ccgccgtgac agatgagcgc aaatggatcg
      421 accgggtagc ccgcgtgcgc cggcgcaata ccccacaaag ccgtgtgtaa ggcgagcgca
      481 aaacccgcgg ccgtccccag aacctgcctg atacccgctc gcataagtcc ctcgcccctg
      541 cgggcccacc ctagcatgga tatagatgcc gcaatcgccg ataaattccc gaaaacgcgg
      601 ctcagccctt gtgttttggc agccgatccg ctttctctga cgcgtcaccc cggggatttc
      661 ttacgaactc catgcgccta tcccgttatt tcctgccgat tctgcgcgaa acgccaaaag
      721 aggctgagat tgtctcgcat cgattgatgc tgcgcgcagg catgatgcgc caggaggcgg
      781 cgggcattta cgcctttctg cccctcggct tccgagtgtt gcagaaaatt tgccagatcg
      841 tgcgggagga acagaaccgg tcgggtgcga tcgagctgtt aatgcccatg gttcagtcgg
      901 cggatctctg gcgcgagagc ggacgctacg acgcgtatgg caaggaaatg ctgcgcacaa
      961 aggatcggca tgagcgcgag atgctctacg gtccgaccaa tgaggaaatg atcactgaaa
     1021 tcttccgcgc ctatgtgcgt tcctacaagg acgtgccgct caatctctat cacattcaat
     1081 ggaagtttcg tgacgaagtc cgcccccgct ttggactgat gcgcggtcgg gaattcctga
     1141 tgaaagatgc ctattcgttc gatctcgatc aggccggcgc aacacactcc tacaacaaaa
     1201 tgttcgtagc ctatttgcgg acatttgccc gcatgggact gaagtcgatt ccgatgcggg
     1261 cggagtcggg gcccattgga ggaaatctct cccacgagtt catcattctg gctcagaccg
     1321 gtgagtcaga agtcttttgc cataaagact atctcgacat gccgatcccg ccggcgaacg
     1381 tcaatttcga tgacgtcgcg ggactgcaga agatcgtcga taaatggacg tcacaatatg
     1441 cggcgacatt ggaaatgcat gatgctgcgg cgttcggcaa cgtgcctgcc gacaagcagg
     1501 tatcggctcg cggcatcgag gtcggtcaca tcttttattt cgggaccaaa tattcagagc
     1561 cgatgaaggc cgtggtggcg acgcctgacg gcaaggaggt gcccgtccac atgggctcgt
     1621 atggcatcgg gcccagccgg ctcgttgcgg ccatcatcga ggcatcgcat gacgagggcg
     1681 gtattatctg gccggaaccg gtagcgcctt tcaaggtcgc gatcctcaac ct
//
LOCUS       DATDHO010000799         2380 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_84618, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000799 DATDHO010000000
VERSION     DATDHO010000799.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2380
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84618"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..416)
                     /locus_tag="VIY07_15625"
     CDS             complement(42..416)
                     /locus_tag="VIY07_15625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383219.1"
                     /translation="MPIDLAQVDWLYVALLAVFVFLTTLVGSLLSFGHRWTASTLSAL
                     LFAALFVFWTYYPHRVPLPKTISVPSAAPASTAAPAPAAPAAPAAPQRPRNPVTDITP
                     PASPPTSPAPAAPATPPAGSTR"
     gene            553..1524
                     /locus_tag="VIY07_15630"
     CDS             553..1524
                     /locus_tag="VIY07_15630"
                     /inference="COORDINATES: protein motif:HMM:NF012607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEY6383220.1"
                     /translation="MPNVLILTEVQEAMRARYKAMLLDRFPQLTINVVGHHNDVDPYI
                     ADIDILLCFSPPMADHVVRDAPRLKWIQALGTGVDNIIDLPSLGKEVLVTNVRGIHGP
                     PVSEAAIAYMLSLARDLPRATHAQDDNRWERWPAQLLAGKTVGILGVGLIAEYLAPVC
                     KTLGMKVIGISTGPRETNGFDRMVHRDDLAKVAAELDFLIALTPLSAGTRGIVGAELF
                     EAMKPTGYLVNVARGGVVDEPALIAALEGDKIAGAAIDVFAEEPLPASSALRKTKNLT
                     IFSHLGGYSQGYEDRAMPTVAGNMSKFLAGDLKSMINIVRKPASWSN"
     gene            1528..>2380
                     /locus_tag="VIY07_15635"
     CDS             1528..>2380
                     /locus_tag="VIY07_15635"
                     /inference="COORDINATES: protein motif:HMM:NF013486.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /protein_id="HEY6383221.1"
                     /translation="MAASERLNNPISSSELERRWRAVRAAMAKEKIDVLLMQNNNDHM
                     GGYVRYFTDMPATNGYPNTVVFPREDEMTVICQGPFGGSEATAQGDQSWRGVKRILTT
                     PSYASAHYTKDYDPELAASALKPFAQATIGYVGTYQMSFALLDYIKRAFPQAKFVDAS
                     DMVDGIKVIKSAEEMELVKRAALMQDGAMRAAFAAVKPGMRDIEVAAVAQHYSQCHGS
                     ENGIYLCASMPLGRPSKFSNRHLQNRIIQKGDQIALLVEDNGPGGMYTELGRSCVVGV
                     KVPQEMKD"
BASE COUNT          515 a          707 c          725 g          433 t
ORIGIN      
        1 tgagccggca gagaacatca ttcaggcagt cgcgcgcaag cctaacgtgt cgagcccgcg
       61 ggcggagtgg caggcgcagc cggcgccggt gacgtcggcg ggctagccgg aggcgtaatg
      121 tcggtaaccg ggttgcgagg cctttgcggc gctgccggcg cggcgggcgc tgccggggcg
      181 ggcgctgccg tgctggcggg cgcggccgac ggcacgctga tcgtcttggg caggggcacg
      241 cggtgcggat agtaggtcca gaacacgaac agtgcggcga acaggagcgc cgaaagcgtg
      301 gaggcggtcc aacggtggcc aaacgacagc aggctgccga ccaaggtcgt gagaaagacg
      361 aatactgcca ataaggcaac gtacagccag tctacttgcg caagatcgat cggcatcgaa
      421 agtcacccct tcctttcgca gtgcataagc cagcttaccc agtcccgcga tgcgggtcac
      481 cctgtcgcgg gacggatctc gttccgaaac gggttccaga ctttcgagat cacgcggtat
      541 acctcctcac cgatgcctaa tgttctcatc cttaccgaag tgcaggaagc gatgcgcgcc
      601 cgttacaagg cgatgctgct ggacaggttc ccgcaactca caatcaatgt ggtagggcac
      661 cataacgacg tcgaccccta catcgcagac atcgatattc tgttgtgttt ttcaccccca
      721 atggcggatc acgtcgtgcg cgacgcgccc aggctaaaat ggatccaggc actcggtacc
      781 ggcgtcgata acatcatcga cctgccttcc cttggcaaag aagttctggt cacaaacgtg
      841 cggggcattc atggcccgcc cgtgtcggaa gcggccatcg cttacatgct ctcgcttgcc
      901 cgcgacctgc cgcgcgcgac ccatgcacaa gacgataacc gatgggaacg ctggccggcg
      961 cagcttctcg ctggcaagac cgttgggatt ctgggcgtgg ggctgattgc ggaatatctg
     1021 gcgccggtct gcaaaacgct tggcatgaaa gtcatcggca tcagcacggg cccccgtgaa
     1081 acgaacgggt tcgaccgcat ggtgcatcgc gacgatcttg ccaaggtggc tgccgaactc
     1141 gattttctga ttgctcttac acctctatcc gccggaacgc gcggcatcgt cggagcagag
     1201 ctctttgagg cgatgaaacc cacaggctac ctcgtcaatg tcgcccgcgg cggcgttgtc
     1261 gatgaaccgg cactgatcgc cgcactggaa ggcgacaaaa ttgccggcgc ggcaatcgat
     1321 gtcttcgcgg aagagccgct gccagcgagc agcgcgttgc ggaagacgaa gaatttgacg
     1381 atcttctccc atctcggcgg ttactctcaa ggttacgaag atcgtgccat gccgacggtt
     1441 gccggcaaca tgagcaagtt cctcgccggt gatctcaagt cgatgatcaa cattgtccgc
     1501 aagccagcct cctggagcaa ctaaaccatg gccgcatcgg aacgattgaa taatcccatc
     1561 tccagttccg aactcgaacg ccgttggcgt gcggtgcgtg cagcgatggc aaaagagaag
     1621 atcgatgtgc tgctgatgca gaacaataac gatcacatgg gcgggtacgt tcgctatttc
     1681 accgacatgc cggcgaccaa tgggtatccc aacacggtag ttttcccgcg tgaggacgag
     1741 atgaccgtca tctgccaggg accatttggc ggaagcgaag cgacggcaca gggtgaccaa
     1801 agctggcgcg gcgtaaagcg catcctcacc acgcccagct atgcatcggc ccactacacc
     1861 aaagattacg atcccgaact tgccgcgagc gcgctcaagc ccttcgctca ggcaaccatt
     1921 ggctatgtcg gcacctacca gatgtctttt gcgctgctcg actacatcaa gcgcgcattc
     1981 ccccaagcga agttcgtcga cgcctcggac atggtggacg ggatcaaggt catcaagagc
     2041 gcggaggaaa tggagttggt caaacgcgct gccttgatgc aggacggcgc catgcgggcc
     2101 gcgttcgcgg cggtgaagcc gggcatgcgc gacatcgagg tcgcggcagt tgcgcagcac
     2161 tacagtcaat gccacggcag cgagaacggc atttatctct gtgcctcgat gccactcggc
     2221 aggccgtcga aattctccaa caggcatcta cagaaccgca tcattcagaa aggcgatcaa
     2281 atcgcccttt tggttgagga caacggaccc ggtggcatgt acacggagct gggccggtcc
     2341 tgtgtggtcg gcgttaaagt gcctcaggaa atgaaagacg
//
LOCUS       DATDHO010000800         2101 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_84666, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000800 DATDHO010000000
VERSION     DATDHO010000800.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84666"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VIY07_15640"
     CDS             complement(<1..360)
                     /locus_tag="VIY07_15640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006204745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6383222.1"
                     /translation="MAQQISHPILDRLFDAAHGSGRLRPTDQGGGVNVTRRLLLAASC
                     ACAACFMSAPSFAATPMVKRQAPAFYRLMLGDFEVTVLSDGSNMLPATKLLHGDAAQI
                     EAALKRGYLPEVVETSHN"
     gene            510..986
                     /locus_tag="VIY07_15645"
     CDS             510..986
                     /locus_tag="VIY07_15645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006204210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEY6383223.1"
                     /translation="MKDGFERWAELADHVLIIAREIQFRGYQDPRAVPLTATEGMVMR
                     YIQDHPITAPKQIAAAVGLQRSNLSTLMRDLERKGLIERTMSEGDRRGVTVRLAEAGR
                     RNYLVVRREWAAAVAKAVEDDTRGLDGALGLLRDIAAGLIAMRPQTPGRDMSRAGA"
     gene            complement(1333..1941)
                     /locus_tag="VIY07_15650"
     CDS             complement(1333..1941)
                     /locus_tag="VIY07_15650"
                     /inference="COORDINATES: protein motif:HMM:NF016056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DCC1-like thiol-disulfide oxidoreductase family
                     protein"
                     /protein_id="HEY6383224.1"
                     /translation="MLLPPCPTARLCPPAPHGLAVPRDSNLARIIGVRRLVTLATTTL
                     LRRPFLGCLLFPCRQSGQSLLIQKVLAANSPHGLILFDGVCVLCSRGCGFVNKRDRRG
                     YFRFVPMQLAEGRPLAEQLGINPDCPDSFAFVENGHAFVKSEAVLRIARELPRWQWTW
                     LFHFMPRVIRDAIYDLVARNRYRWFGRRDACMLPNSDRSWPS"
BASE COUNT          466 a          582 c          649 g          404 t
ORIGIN      
        1 attgtgggaa gtctcgacaa cctcggggag atagccgcgc ttcagtgctg cttcgatttg
       61 agcagcatcg ccatgcagca atttggttgc cgggagcata ttgctgccat ccgagagcac
      121 cgtcacttcg aaatcgccga gcatcagccg atagaacgca ggcgcctgac gtttgaccat
      181 tggcgtggcc gcgaatgacg gtgccgacat gaaacaagcc gcacaagcgc agctcgcggc
      241 cagaagaagg cggcgcgtga cgtttacgcc gccaccttga tcggtcgggc gcagacggcc
      301 ggacccgtgt gctgcatcga acaaacgatc gaggatcggg tgagatattt gctgtgccat
      361 ggaggttctc tcccagtaat ggcgacgcgt tttcaagatc ccagagttaa tataggtata
      421 taattataat tattatggct atatacattt aagcggatcc ggcataacct gtgcgcatgg
      481 gaactcgaat tggccgacgg aaaaaaacag tgaaggatgg gttcgaacgg tgggcagagc
      541 tggccgacca tgtcctcatc atcgcgcgcg aaatccagtt tcgcgggtat caggacccgc
      601 gggcggtgcc actcaccgca accgaaggca tggtcatgcg gtacatacaa gaccatccga
      661 tcaccgcgcc caaacagatc gccgcggctg ttggactcca gcgcagtaat ctttcaacgc
      721 tcatgcgcga cttggagagg aagggtttga tcgagcgcac catgtcggaa ggcgatcgtc
      781 gcggcgtcac ggtccgtctc gcggaggccg gacgccgcaa ttatctggtc gtccggcgcg
      841 aatgggcggc tgcggtcgcc aaggcggtag aagatgacac gcgtggcttg gatggggcct
      901 taggcctgct cagggacatc gcggctggtc tcatcgcgat gcgaccacaa acgccgggac
      961 gggacatgag ccgcgcggga gcctgacatg tcacggcaca ctagttcgtc gttcaatcca
     1021 cattgaatga tcgcagtggc gcgccaactc gccatagatg ccaaatttaa aacgcgctta
     1081 tgtccgctat tggcccttag cagatattgt tcgggcaggg ctgaatgtct gctttcgggg
     1141 gtaaagcgga catggcgcac gcgagataat cgttacattc cctcgtcgag aattattggg
     1201 agcgccgccc gaattgctgc agccctcaga tcacgacacg tctggccaag cctgctcggt
     1261 ttgtctcgtc gtcgttcagt ctgacacaat ttagcggtgg catcgaagcc gggtttctga
     1321 cctcggcggt ggtcacgatg gccacgaacg atccgaattc ggcagcatgc aagcgtcacg
     1381 acggccgaac cagcgatagc ggttgcgcgc gaccaagtca tagatcgcgt cgcggatcac
     1441 ccgtggcatg aagtgaaaga gccacgtcca ttgccagcgc ggaagctcgc gcgcaatacg
     1501 cagcacggct tcggatttta caaaggcgtg gccgttttcc acgaacgcaa aggaatccgg
     1561 gcaatcagga ttgatgccaa gctgctctgc gagcggacgt ccctcggcca actgcatcgg
     1621 aacgaagcga aaatagccgc ggcgatcacg tttgttcacg aagccgcagc cccgcgagca
     1681 taggacgcac acgccgtcga acaggatcag gccgtgcggc gagtttgctg ccaggacttt
     1741 ttggatcaac aacgattgac cgctctgcct gcatggaaaa agcaaacacc cgagaaacgg
     1801 ccgacgcaac agggtagttg ttgccagggt aacaaggcgt ctcacgccaa taatacgtgc
     1861 cagattgctg tctcgcggca ccgctaggcc gtggggcgcg ggcgggcaga gtcgcgcggt
     1921 agggcagggc ggtaggagca ctgctagaag ttgggcctac ccgcgccgac gaggtgatcg
     1981 aatagcgatc ctttttgctg cgcggtatga gtccgctttt ggcccaaagc ggacatgagg
     2041 tactgcaccg cacagtatgg taggccgcgc atcattgcgt tggcggtctt ggctgctaca
     2101 g
//
LOCUS       DATDHO010000801         3703 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_237130, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000801 DATDHO010000000
VERSION     DATDHO010000801.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3703
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237130"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(227..412)
                     /locus_tag="VIY07_15655"
     CDS             complement(227..412)
                     /locus_tag="VIY07_15655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383225.1"
                     /translation="MTQNEKYEQYAREAREQVSHACNDADKAAWLWIAQSWLNLLGQN
                     EPSAGGSGSDADPVKAG"
     gene            complement(1103..2167)
                     /locus_tag="VIY07_15660"
     CDS             complement(1103..2167)
                     /locus_tag="VIY07_15660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate/isopropylmalate dehydrogenase family
                     protein"
                     /protein_id="HEY6383226.1"
                     /translation="MHLLVLPGDGIGPEITAATLVVLRAASDRFDLGLRIEEAATGHA
                     GLRAHGHTIHPDIVEKARRADGVVLGPTSTFEFKDPAKGEVNPSMMLRKSLDLFANIR
                     PARTYAGFPLRCGEFDLVVARENTEGFYADRNMEAGSGEMMVTKDVAISLRRITRACS
                     ERIARVAFELAMTRHKHVTIVHKANVLKVTDGLFIEECRKVAREFPAVTVDDVIVDAM
                     MAHVVRNPRRFDVIVTTNMYGDILSDLTAELSGSLGLAASLNAGTNHGMAQAAHGSAP
                     DIAGTNVANPLSLILSVAMLLAWYGRRKQAKPFQAAAAAIEKSVEAAIAAKESTADIG
                     GRLGTRETGDAVAARVQAQK"
     gene            complement(2340..>3703)
                     /locus_tag="VIY07_15665"
     CDS             complement(2340..>3703)
                     /locus_tag="VIY07_15665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEY6383227.1"
                     /translation="SNFDGKVKFKSKNVAKNSDNEVVAMVRNMVVAVVDPDGTERAHH
                     RIPYGARLRVEDGEKIKRGQRIAEWDPYTRPILTEVEGDAGFEDLIDGVSMSEALDES
                     TGIAKRVVIDWRTGASRNQQDLRPAIVIKSGNKLLKLARGGEARYQLAVDAIISVDPG
                     GHVKAGDVIARIPTESAKTRDITGGLPRVAELFEARRPKEAAIIAEIGGTVRFGKDYK
                     NKRRITIEPSGKGEEPKEYLIPKGKHIHLQDGDVIEKGDYIVEGNPAPHDILAIKGVE
                     ELAAYLVNEIQEVYRLQGVNINDKHIEVIVRQMLQKVEIDDSGDTELLQGEQIDKIEL
                     DEINARAEAEGKKGATGHPVLLGITKASLQTRSFISAASFQETTRVLTEAAVNGKADT
                     LDGLKENVIVGRLIPAGTGAMMNSLREVATKRDALILEEREKDAAKAAVKPEEAPALP
                     AAE"
BASE COUNT          677 a         1138 c         1072 g          816 t
ORIGIN      
        1 cggccaattg gccgtccttg cgtaaccctt gatttttgct tgaggacatc tggattttga
       61 acgcaaccct gttcgggcgc gggaaccggg tgttggcgcg gcaaaaacgc cccgattcgg
      121 ggcgccaact cattcggttg agacttcggg tcggggaaaa cgggctgcgg cgctcttggc
      181 ggccggatcc cgccagaacg ctttcagcgg attggaaacg gacttgctat ccagctttga
      241 ccgggtcggc gtccgagcca gaacctccgg cactgggttc gttctggccc aaaagattga
      301 gccaactttg tgcaatccac agccacgcgg ccttgtcggc atcattgcag gcgtggctta
      361 cctgttctcg cgcctcgcgc gcatactgct cgtacttttc gttttgggtc atgatagcac
      421 ccccaacgct gcgcagatgc agccaaccag acacactgcg cagacggccg aaaagaccag
      481 acctacgatc tcgaaaccga ccatcgtcgc ctcccttacg ctagccagtc actgttaaaa
      541 ctttgccaac tctgtcgtgt cgcaagttgc caagatggcc ggtttgactg ccggcgcatt
      601 tttgttggtg gctcctgcgt caggggacaa tgacgcggga catcagttcg ccgagctcgt
      661 acggccgatt tagaccgcgg ctggccaggt gtgggctttc gaaatgatgc gattcgattg
      721 catcagcttt ggtcgcatct tcaaagagat ggcccacgta ggctgctata cgggcgaacc
      781 ttgcggatgc gccggcatga ttggtgctgg tgatcatcct cttccccttg tcgcgaggcc
      841 ctcgaaaacg ggctttccgg cactctcaaa ttaatgtggg gcggatttgg tcgctgtgtt
      901 cgccgtcaca aaaaagctga ttccggcact ccctgtgatc tatcgcacag ccaaagtgag
      961 cccggagagc gaggttagta gagcgtgacg ccgattatca ccttagctcg gtgtgtcccc
     1021 tttcggcgga tcgcagaagg gaccgttgtc attctcgcgc agcggtccct ttttatttca
     1081 gcgaagctct cgatccacaa cgctattttt gcgcctgcac tcgcgccgcg acagcatcgc
     1141 cggtctcccg cgtgcccaat cgccccccga tgtcggccgt tgattccttg gccgcgatag
     1201 ccgcttcaac tgatttctca atggctgccg cagcggcctg gaaaggtttc gcctgtttgc
     1261 gccgtccgta ccatgcaagc agcattgcca ccgacaggat cagcgacagc ggattagcaa
     1321 cgttcgtgcc ggcaatgtca ggcgctgagc catgtgcggc ctgcgccatc ccatgattgg
     1381 ttcccgcatt caacgaggcc gcgagaccga ggcttccgga taattcagcg gtcaagtcgg
     1441 aaagaatatc gccatacatg ttggttgtga cgatgacgtc gaagcggcgg ggattgcgca
     1501 cgacatgcgc catcatggcg tcgacgatga cgtcatcgac cgtcaccgcc ggaaattccc
     1561 gcgcgacctt gcgacattcc tcaatgaaca ggccgtcagt gaccttgagg acattcgcct
     1621 tgtgaacaat ggtgacatgc ttgtgccgtg tcattgccag ctcgaaagca acgcgagcaa
     1681 tgcgttcgct gcacgcgcgg gtaatgcggc gcaaggagat ggcgacatcc ttggtcacca
     1741 tcatctcgcc gcttcccgct tccatgttgc ggtcggcata gaagccttcg gtgttttcac
     1801 gagcgacaac gagatcgaat tcgccacagc gaagcgggaa gcctgcatag gtgcgtgctg
     1861 gccggatatt ggcgaacaga tcgaggctct ttcgcagcat catcgaagga ttgacctcgc
     1921 cctttgcagg gtccttgaat tcaaaggtcg aggttggacc gagcacgaca ccgtcggccc
     1981 tgcgcgcctt ttcgacaatg tcgggatgga tcgtatgtcc atgcgcacgc aggccggcgt
     2041 gtcccgtcgc cgcctcctcg atccgcaatc ccagatcgaa gcggtcggac gcggcgcgca
     2101 ggaccacaag cgtagcggca gtgatttcgg gaccgatacc gtcaccggga agtacaagga
     2161 ggtgcatacg tgtcgtccga attgcgatcg gccatcatca ctttttcctc aataaagaaa
     2221 agagctacga cagcagagcc tttatgcgtg acgtgctttg cccgcgtccg cgtcgcgaga
     2281 cttttcggca aacaaaaggg ccgccaaacg gcggcccttt cgattcgtta tgccgaaggt
     2341 tattcggccg ccggcagggc cggagcttcc tccggcttga ccgcagcttt ggccgcatcc
     2401 ttctcgcgct cctcgaggat gagcgcatcg cgcttggtgg cgacctcgcg cagactgttc
     2461 atcatggcgc cggtgccggc cgggatgagg cggccgacaa tgacgttctc cttgagtcca
     2521 tcgagcgtat cagccttgcc gttgactgcg gcttcggtga gcacgcgtgt cgtctcctgg
     2581 aacgaggccg cggagatgaa tgaacgcgtc tgcaggctgg ccttggtgat accgagcagg
     2641 accgggtgac cggtcgcgcc cttcttgccc tctgcctcgg cacgcgcgtt gatctcgtcg
     2701 agctcgatct tgtcgatctg ctcgccctgc aacaactcgg tgtctccgga gtcgtcgatc
     2761 tcgaccttct gcaacatctg acgaacaatc acctcgatgt gcttgtcgtt gatgttgacg
     2821 ccctgcagcc gatagacctc ctgaatttca ttcaccaggt aggcagcgag ttcctcgacg
     2881 cccttgatgg cgaggatgtc gtgcggggcc ggattaccct cgacgatata atcgcccttc
     2941 tcgatgacgt cgccatcctg caagtggatg tgcttgccct tcggaatgag gtactccttg
     3001 ggctcctcgc ctttgccgga cggttcgatc gtgatgcggc gcttgttctt gtagtccttg
     3061 ccgaaccgca ccgttccgcc gatttcggcg atgatcgctg cttccttcgg cctgcgggcc
     3121 tcgaacagtt ccgccacgcg cggcagaccg ccggtgatat cgcgagtctt cgcgctctca
     3181 gtcgggatac gcgcgatgac gtcgccagcc tttacatgac cacccggatc gaccgagatg
     3241 atggcatcga cggcgagctg atagcgcgcc tcgccgccgc gagcgagctt gaggagcttg
     3301 ttgcccgact tgatcacgat agccggacgc agatcctgct gattgcgcga cgctccggtg
     3361 cgccagtcga tgaccacccg ctttgcaatg ccggtggact cgtcgagggc ctcagacatc
     3421 gataccccgt cgatgaggtc ctcgaatccg gcatccccct ccacctcggt caaaatcggc
     3481 cgcgtgtagg gatcccactc cgcgattcgc tggccacgct tgatcttctc gccgtcctcg
     3541 acgcgcaaac gcgcgccgta cggaatacgg tgatgcgcgc gttccgtgcc atcgggatca
     3601 acgactgcga cgaccatgtt gcgcaccatc gcgacgacct cgttgtccga gttcttcgca
     3661 acgttcttgc tcttgaactt gacctttccg tcaaagttgg act
//
LOCUS       DATDHO010000802         1523 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_84782, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000802 DATDHO010000000
VERSION     DATDHO010000802.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1523)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1523)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1523
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_84782"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..140
                     /locus_tag="VIY07_15670"
     CDS             <1..140
                     /locus_tag="VIY07_15670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEY6383228.1"
                     /translation="FTVKHRTPRVGRNPRTGAAVDVGERFVPFFKTGKDLRERVNGNK
                     H"
     gene            240..>1523
                     /locus_tag="VIY07_15675"
     CDS             240..>1523
                     /locus_tag="VIY07_15675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
                     /protein_id="HEY6383229.1"
                     /translation="MRSLRADWEGELGRWLEPFVERLGHQARRRMCPLYVAGLIGPGD
                     RKSVAPIAERFAPGDYDRLHHFVAAGVWDAAPLEAELLAQADKLVGGSDAVLVIDDTA
                     MPKKGEHSVGVAAQYASALGKTANCQTLVSLTLARGEVPVPVALRLFLPQSWTNDAGR
                     LQRAGVPLACRTARTKPQIALAEIDRLIAGGARFGCVLADAGYGQSAPFRQELTRRNL
                     TWAVGIPRHLKVYPVSVQLIWPIARRGRPRQRSIPDVLSMAAEDMLADAKWRTITWRT
                     GTKGKLKARFAAMRVRTADGPPQRIGDKGQQHLPGDEAWLIGEQRASGEKKYYLANLP
                     AGTNLRTLAATIKARWVCEQAHQQMKEELGLDHFEGRSWQGLHRHALMTMIAYAFLQH
                     RRLATARREKKNQRPTTPADFASRAPRHPRTHRPTT"
BASE COUNT          284 a          477 c          491 g          271 t
ORIGIN      
        1 ccttcacggt caagcatcgc acgccccgcg tcggtcgcaa tccgcgcacc ggcgcggcgg
       61 tggacgtggg ggagaggttc gtgccgttct tcaagaccgg caaggaccta cgtgagcgcg
      121 tcaacggcaa caagcattga atttgtcact agcactactt tggcagattt tttgcggcta
      181 gggattcccg aatcagtttt tcagtgattc atgggtggtc ggctgatgga gggccgacca
      241 tgagaagctt gagggctgat tgggaagggg agcttgggcg ctggctcgag ccgtttgtgg
      301 agcggctggg tcaccaggca cggcggcgga tgtgtccgct ttacgtcgca gggctgatcg
      361 gtccgggcga tcgcaagagc gttgcgccca tcgccgagcg atttgcgccg ggtgactatg
      421 accggttgca ccactttgtc gctgctggcg tctgggacgc ggctcctctg gaggcagagc
      481 ttctcgccca ggctgacaag ctggtcggcg gcagtgatgc ggtgttggtg atcgacgaca
      541 cggccatgcc gaagaagggc gagcactcgg tcggcgtcgc tgcgcaatat gcgtcggcac
      601 tcggcaagac cgccaattgc cagacgctgg tgtcattgac gctcgcacgc ggcgaagtgc
      661 cggtgccggt ggcattgcgt ttgttcctgc cgcagagctg gaccaatgat gcgggacgtt
      721 tgcagcgggc cggcgttccg ctcgcatgtc ggactgcacg aaccaagccg cagatcgcgc
      781 ttgccgaaat cgatcgcttg atcgcaggcg gtgcccgctt cggctgtgtg ctggccgatg
      841 ccggttatgg gcagagcgcg ccgttccgcc aggagctgac gcgtcgcaac ctgacctggg
      901 ccgtcggcat ccctcgtcac ctcaaggtat accctgtcag cgtgcaactg atctggccaa
      961 tcgccaggcg tggccgcccg cgtcagcgct ctattccaga tgttctgtcg atggcggccg
     1021 aagacatgct agccgatgcc aagtggcgga ccatcacctg gcgtaccggc acgaaaggca
     1081 agctcaaagc ccgcttcgcc gctatgcgcg tgcgcacagc cgatggaccg ccgcagcgga
     1141 tcggggacaa gggccagcaa catctgccgg gcgacgaagc ctggctgatt ggcgaacagc
     1201 gcgcgtcagg agagaaaaaa tactacctcg ccaacctgcc cgctggcacc aacctgcgca
     1261 cgctggctgc caccatcaag gcgcgatggg tctgcgagca ggcccatcag cagatgaaag
     1321 aagaactcgg cctcgatcac ttcgagggcc gatcctggca aggccttcac cggcacgcgc
     1381 tcatgacgat gatcgcctac gccttcctcc agcatcgccg cctcgcaaca gcaaggcggg
     1441 aaaaaaagaa tcaacggccc accaccccag ccgactttgc cagccgtgcg ccacgccatc
     1501 ctcgaactca tcgcccgact acc
//
LOCUS       DATDHO010000803         2311 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_38388, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000803 DATDHO010000000
VERSION     DATDHO010000803.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2311
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_38388"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1262
                     /locus_tag="VIY07_15680"
     CDS             <1..1262
                     /locus_tag="VIY07_15680"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6383230.1"
                     /translation="EVATLEAQFGQLLGGAEIIATVSHQHIYGLLFNVLWPLTAGRAI
                     HAREYYFPQELMAVLAERGGVLVSSPAHLKRLPQHLAWTMTSNRLRAVFSSGGPLPFE
                     IACEVDRLLGVVPIEVYGSSETGGIGWRQQRSSMDDAWTPMPGVTCRVDPEEDVLEVR
                     SPHLPSKDWFRTADRATFVGDNRFQMTGRVDRIVKLEEKRISLSAIESQLRTSPMVAD
                     ARVVVVEGNRPRIAALIVPSLQGHSKLAEVGKLAFNRMLRDTLSQFIEPVGIPRLWRY
                     LDALPINAQGKTTRADLIAALGNETARPTMPLKRLIERDAQRAVFEFTPPRDLVYFSG
                     HFRDLPILAGVVQIDWVIAYGRQCFDLPSIFRSIHALKFQRIIAPEKPFTLELVHEPG
                     KSSLSFKITSRVGTHTSGRLLFGAPDV"
     gene            1243..1998
                     /locus_tag="VIY07_15685"
     CDS             1243..1998
                     /locus_tag="VIY07_15685"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY6383231.1"
                     /translation="MERQMFNPCVVIPVYNHEHAVDAVVRAVVEQNLSCILVDDGSSW
                     KCARVLDALASGTPDRITLIRHPINQGKGSAVLSGIRYAARSGYTHVLQIDADGQHRA
                     SDIPRFLQLAAAHPRTLIVGCAEYDATVPWLRFCARYLTHIWVWINTLSLQITDSMCG
                     FRVYPVRAVMALEQRQKLGERMNFDTEVLVRLYWDGLEIISVPTPVSYPSDGVSHFRG
                     WLDNFLISRMHTSLFFGMLLRLPMLIARKRRTQ"
     gene            1995..>2311
                     /locus_tag="VIY07_15690"
     CDS             1995..>2311
                     /locus_tag="VIY07_15690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383232.1"
                     /translation="MTQPMSESRRQHWAQINEFSFVAGIRLLFSICCNLGRWPFRIAL
                     YPVLLWYLVTKPEVRASSSDYLRRIAGFQGASQIRPGRLAVLRHFASFAENLLDRMLL
                     WSG"
BASE COUNT          445 a          627 c          676 g          563 t
ORIGIN      
        1 gagaggtagc gacgcttgaa gcgcagttcg ggcagctgtt gggcggcgcg gagatcatag
       61 ctaccgtgtc ccatcaacac atctatggtt tactcttcaa tgtcttgtgg ccgcttacgg
      121 cgggacgtgc catccacgcg agggaatatt acttcccgca ggagctaatg gcggtcctgg
      181 cggagcgcgg tggtgtattg gtatctagcc cagctcatct aaagcgtttg ccgcaacatc
      241 tcgcttggac gatgacatcg aaccggttgc gggcggtgtt ttcgtccggg ggacctttgc
      301 cgttcgagat tgcgtgtgaa gtcgaccggt tactcggtgt ggtgccgatt gaagtttacg
      361 ggagctcgga gaccggtgga attggctggc gtcaacaacg ctcgagcatg gatgatgcat
      421 ggacgccgat gcctggcgtt acatgtcgtg tcgatccgga ggaagatgta ctggaggtcc
      481 gctcaccgca tttgccttcc aaagattggt ttcgcacggc ggaccgggcg actttcgtcg
      541 gcgacaatcg tttccagatg accggacgtg tcgatcggat cgtaaaactc gaggaaaaac
      601 ggatatccct gagcgcgatc gaaagtcagc tgaggacgtc ccccatggtg gccgatgccc
      661 gcgtagttgt ggttgaagga aaccggccgc ggattgctgc cttgatcgtg ccttcgctcc
      721 aagggcacag caaactggca gaggtcggta agctcgcctt caatcgaatg ttgcgagata
      781 cgctcagtca gttcattgaa cccgttggaa tacccaggct ctggcgttat ctcgacgcgt
      841 tgccgatcaa tgcccagggt aaaaccacgc gtgccgatct catcgcagcg ctcggcaacg
      901 agactgcgcg tccgacaatg cccctaaagc gcctaatcga aagggacgcc cagcgcgccg
      961 tcttcgagtt caccccacct cgcgacctgg tttattttag cggccatttc cgcgatctgc
     1021 cgattctagc cggtgtcgtc cagatcgact gggtgattgc ctacgggcgg caatgctttg
     1081 atttgccgtc aatctttcgt agcatccacg cgcttaagtt ccaacgcatc atagctccgg
     1141 aaaagccgtt tacactggag cttgtccatg agcccggcaa atcatcgctg tcttttaaga
     1201 tcacgtcgcg agtcggcacg cataccagcg gacggctact gtttggagcg ccagatgttt
     1261 aacccttgcg tagtcattcc ggtttacaac cacgaacatg cagttgatgc tgtagtgcgt
     1321 gcggtcgttg aacagaactt gtcttgcata ctcgtggatg acggcagctc ctggaaatgc
     1381 gcgcgtgtac ttgacgcgct cgccagtggc acgccagacc gaatcacctt gattcgacac
     1441 ccgatcaatc agggcaaggg cagcgccgtg ctcagcggta tccgatacgc cgctcgatcg
     1501 ggttacactc acgttcttca gatcgatgcc gatggccaac accgcgcgtc cgatatcccg
     1561 cgctttctgc agcttgccgc tgctcacccg aggacgctca tcgtcggctg cgcggaatac
     1621 gacgcgaccg ttccatggct ccggttttgt gcccgttatc taacccacat ttgggtttgg
     1681 attaacacgt tgtcgctaca gatcacggat tcgatgtgcg gctttcgggt ctacccggtt
     1741 cgagctgtaa tggcgctgga gcaacgtcaa aaactcggcg agcggatgaa ctttgacacg
     1801 gaagtgctcg tccgtttgta ttgggatggg ctggagatta tcagcgttcc tacgccggtc
     1861 agctatccta gtgatggagt ctcgcacttt cgtggctggt tggataactt cctgatttcg
     1921 cgaatgcaca cgagcttgtt cttcggcatg ttgttgcggc tgcccatgtt gattgcgcgc
     1981 aagcggagga ctcaatgacg cagcccatgt ccgagagtcg acggcagcat tgggcgcaaa
     2041 tcaatgaatt tagcttcgtg gcgggtattc gcctgctttt ttcgatctgc tgtaatttgg
     2101 ggcgctggcc atttcggatt gcgctgtatc cagtcttgct gtggtatctg gtgactaaac
     2161 ccgaggtgcg cgcatcgtca agcgattatc tacggcggat tgctgggttt cagggtgctt
     2221 ctcaaatccg acccggcagg ctcgccgtgt tgcgtcactt tgcgtcattc gccgagaacc
     2281 tgcttgatcg aatgttattg tggagcggct t
//
LOCUS       DATDHO010000804         2031 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_85062, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000804 DATDHO010000000
VERSION     DATDHO010000804.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2031)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2031)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2031
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85062"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(223..558)
                     /locus_tag="VIY07_15695"
     CDS             complement(223..558)
                     /locus_tag="VIY07_15695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383233.1"
                     /translation="MDVLLQAQVEAIMRRYFALSVGSVLAGVMLVSAASADTYFRRNH
                     NGTWTNVEYNDGVCKYYYAHNSYDQDLKINRYGDCSRVAIGPDGNPAPVVTGPVIVRQ
                     RPLAAAPLR"
     gene            652..1467
                     /locus_tag="VIY07_15700"
     CDS             652..1467
                     /locus_tag="VIY07_15700"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY6383234.1"
                     /translation="MVASDKLFAGSIPEIYDRYLVPLIFEPYAVNVAARINKIGPSHV
                     LETAAGTGVLTRAMAARLPAGARIVATDLNQPMLDYAARHAGADRERIEWKQSDAQAL
                     PFPDQGFDVVACQFGVMFFPDKVQGYKEARRVLRPGGRFIFTVWDKISENDFADTVTQ
                     ALASVFPDDPPRFLARTPHGYHDENQIRSDLKSAGFTDVSVDDVSATSKAASASEPAI
                     GFCQGTPLRNELDARDPARLEDATKQAARAVADRYGSGAIEGRIRALVITAAP"
     gene            complement(1522..1719)
                     /locus_tag="VIY07_15705"
     CDS             complement(1522..1719)
                     /locus_tag="VIY07_15705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383235.1"
                     /translation="MQTAWLLLAYALIVVIGEAIVVALGLTFWDRQFPTLSVPVSIVT
                     YLAVFFLGWKLAVRLTEPKHG"
BASE COUNT          437 a          615 c          611 g          368 t
ORIGIN      
        1 tcaagcacga acctgacagt cgcaatacac tcacatccct gcccgctttt caattatgtg
       61 tgaataaaga atcatggcgc tcatgcgctg cagcaaagtg cacaggccct gaattcgccg
      121 gcaacgaaat gccgatcagg ccgattcatc cggctgtttt gcaatcaaaa accccgggct
      181 catcgcccgg ggttttacga gacgtgcgct atagccagga cgctagcgaa gcggcgctgc
      241 ggccagcggc ctttgtctga cgatcaccgg gccggtcacg accggcgcgg gattgccgtc
      301 gggaccgatc gcaacgcgcg agcagtcgcc ataccggttg atcttcaggt cctggtcgta
      361 ggagttgtgc gcgtagtagt acttacaaac gccgtcgttg tattcgacgt tggtccaggt
      421 gccgttatgg ttacgacgga aataggtatc cgccgacgcg gccgaaacaa gcatcacacc
      481 ggccaggaca gaacccaccg aaagcgcgaa atatcgacgc atgatcgcct ccacttgtgc
      541 ttggagcaaa acgtccatgc gaggtcatcg ttccgcgcgg gaacttttcg aaacgcaaat
      601 cgcgttacaa atgtggtatc accaaggtgt cagcgtgacg ggagaagtct cgtggttgca
      661 agtgacaagc tcttcgcggg atcgatcccc gaaatctacg atcgatatct ggtcccgctg
      721 atattcgaac cttatgcggt gaatgtcgcc gcgcgaataa acaaaattgg cccctctcat
      781 gtgctggaga ccgccgcggg aaccggcgtt ctgacacgcg cgatggcggc gcggcttcct
      841 gcaggcgcac gaattgtcgc aaccgacctc aaccagccaa tgcttgatta cgcagcacga
      901 cacgccggcg cggatcgtga acgcatcgaa tggaaacagt ccgatgccca ggcgctgccg
      961 ttcccagatc aaggcttcga cgtcgtcgcg tgccagttcg gcgtcatgtt ttttcccgac
     1021 aaggtgcagg gatacaagga agcgcggcgg gttctgagac cgggcggtcg attcatattc
     1081 acggtctggg acaagatctc ggaaaacgat ttcgccgata ctgtcacgca ggctctcgct
     1141 tccgtctttc cggacgaccc tccccggttt ctcgcgcgga cgccgcacgg ctaccacgac
     1201 gaaaatcaga ttcgcagcga cctgaagagc gccggattta ccgacgtgtc agtcgacgat
     1261 gtgtcggcca caagcaaggc cgcatccgcc tccgagccgg caatcggatt ttgtcagggc
     1321 acgcccttgc gcaacgaact cgatgcgcgc gatcccgcgc ggctggaaga tgcaacgaag
     1381 caagccgcca gggccgtggc ggatcgatac ggaagcggcg ccatagaggg gcgcattcgt
     1441 gcgctggtga taacggccgc gccctagcgc gacttccacg gccatccgat tgaatgaacg
     1501 ccttgcctac gacccgagct gctagccgtg cttcggctcg gtcaggcgca cggcgagttt
     1561 ccatccgagg aaaaagacgg cgaggtacgt gacgatggaa accggcacgc tcagcgtggg
     1621 gaactggcga tcccagaatg tcagaccgag tgcgacgacg atggcttcgc cgatcacgac
     1681 gatcaaggca taggccaaca agagccaggc tgtttgcatt gacgactcca cgctggaaac
     1741 gacgtcaggc tagcggcgga acgcaaaacg tgaattgacc agatcgtcgc gcctgctgcc
     1801 tcaaggttgc cacgcactga cggcgcgcgc gtgcgaccaa atgtccgccc tggtagcagg
     1861 agggcggtcg ctagctccgc gggacgccgg ccgtagcaag gccgtcggca agacgcgcca
     1921 tgaaggccgg cgggaaaggc catgcggtcc ttgctctctc cacggtcagg tcgggatcct
     1981 tgcgcatcag ccgtcttgca atgcgtcgcg cctcagccct ggacctggca t
//
LOCUS       DATDHO010000805         1688 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_481574, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000805 DATDHO010000000
VERSION     DATDHO010000805.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1688
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_481574"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..535
                     /locus_tag="VIY07_15710"
     CDS             <1..535
                     /locus_tag="VIY07_15710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY6383236.1"
                     /translation="DEAVIGGIGNANFDLWASGQRPQNFYMLGSMGLAIPIALGVAIA
                     QPQRHVIALEGDGSLLMQLGCLATVAERAPKNLTIVVWDNGIYQITGSQPTASAAAAD
                     LVAIARGAGIANSAWAADEADFDRLASSALKGEGPSLIAARIDNKPAVATTDRDPVQI
                     RERFMRGLGVRSGISSQ"
     gene            828..>1688
                     /locus_tag="VIY07_15715"
     CDS             828..>1688
                     /locus_tag="VIY07_15715"
                     /inference="COORDINATES: protein motif:HMM:NF013739.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY6383237.1"
                     /translation="MPEFDGVVIGAGHNGLTVAAYLARAGLRIAVLERNDRIGGGCST
                     DPDILPGFRLNLHANFYMGMSHCPLIEDLELYRYGFSYIEPPVQQAAVFRDGTCITIH
                     KDLDKTCASLARFSKQDAETFRALWHTYCLEMRPLLACLLYNAPMPREQLVERLSGAK
                     AKELLSHAQHDLFSVVRKHFVDERIRTLFTSYMHVITTENVMGAGIVFPAIFANIASF
                     TLPVGGAVSLVNALTRVLEAGGGQVIAGADVKEIVVRRGRATGVKLADGRTIEAKKFI
                     ASAIDFPTTVL"
BASE COUNT          317 a          534 c          534 g          303 t
ORIGIN      
        1 cgacgaagcg gtcatcggcg ggatcggcaa cgccaatttc gacctgtggg ccagcgggca
       61 gcggccgcag aatttttaca tgcttggcag catgggcctt gcgatcccga tcgcgctcgg
      121 cgtcgccatc gcacagccgc agcggcacgt gattgcgctc gagggcgacg gctcgctgct
      181 gatgcagctc ggttgcctcg caaccgttgc cgagcgcgcg ccgaagaatc tcaccatcgt
      241 ggtgtgggac aatggcatct accagatcac cggctcgcag ccgacggcga gcgcggcggc
      301 cgcggacctt gtcgccattg cgcgcggcgc cggcatcgcc aacagcgcct gggccgcgga
      361 cgaagcggac ttcgatcggc tggcatcatc cgcgctgaag ggcgaggggc ccagcctgat
      421 cgccgcgcgc atcgacaaca agccggcggt ggcaacaacc gatcgcgatc cggtgcagat
      481 ccgcgaacgc ttcatgcgcg ggctcggggt aagatcaggg atcagtagtc agtaatcagt
      541 gatcagtaat cagggatcag tgatcagtaa agccaaacgt gcagtgcctc tcacccgtca
      601 tgcccggcct tgtgccgggc atccacgtct tccttgtgag gccgtaaaga cggggatgcc
      661 cgcgacaagc gcgggcatga cggattaaag atatcgcacc aactccgttc attcccgcga
      721 aagcgggaat ccagacacaa ggtcagattc aaagtttctg ctgggtcccc gcttccgcgg
      781 ggacgaacgg cccaatagaa ttggctgtac catgcaatgt ggcgtccatg cctgagttcg
      841 acggagttgt catcggcgcg ggtcataacg gcctgacggt tgcggcgtat cttgcccgcg
      901 ccggattgcg cattgccgtg ctcgagcgca acgaccgcat cggcggcggc tgcagcaccg
      961 atcccgacat tctcccgggt ttccggctca acctgcatgc caatttctac atggggatga
     1021 gccattgccc gctgatcgag gatctcgaac tgtaccgtta cggcttttcc tacatcgagc
     1081 cgcccgtgca gcaggcggcg gtcttccgcg atggtacctg catcaccatc cacaaggatc
     1141 tggacaagac ctgcgcctcg ctcgcgcgct tttcgaaaca ggatgcggaa acgttccgcg
     1201 cgctctggca cacctattgt ctcgagatgc ggccgctgct ggcctgcctg ctctacaacg
     1261 cgccgatgcc gcgcgagcag cttgtcgagc gactgagcgg agcgaaggcg aaggaactgc
     1321 tgtcccacgc gcaacacgat ctgttcagcg tcgtgcgcaa gcatttcgtc gacgagcgca
     1381 tccgtacgct gttcacctca tacatgcacg tcatcaccac cgagaacgtg atgggcgccg
     1441 gcatcgtgtt cccggcgatc tttgccaaca tcgcaagctt cacgctgccg gtgggcggtg
     1501 cggtctcgct ggtgaatgcg ctgacccgcg tgctcgaggc cggcggcggg caggtgatcg
     1561 ccggcgccga tgtgaaggag atcgttgtca ggcgggggcg cgcgaccgga gtcaagctag
     1621 cggacgggcg cacgatcgag gcgaagaaat tcatcgccag cgcaatcgat ttccccacca
     1681 cggtgctc
//
LOCUS       DATDHO010000806         3943 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_338150, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000806 DATDHO010000000
VERSION     DATDHO010000806.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3943)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3943)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3943
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338150"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(285..1862)
                     /locus_tag="VIY07_15720"
     CDS             complement(285..1862)
                     /locus_tag="VIY07_15720"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEY6383238.1"
                     /translation="MTSNSKSDKDRVVIFDTTLRDGEQCPGATMTHEEKLEVAELLDA
                     MGVDIIEAGFPIASEGDFAAVQEIAQRSKKAVICGLARAAFKDIDRCAEAIKPARRKR
                     IHTFISTSPVHMKYKLQKEPHEVFEMVVAQVTRARGYTDDVEWSAEDATRTEHDFLCR
                     CVEAAINAGATTINIPDTVGYTVPEEYFALIDMLRSRVPNADKARFSTHCHNDLGMAV
                     ANSLEGVKAGARQIECTINGIGERAGNAALEEVVMAMKVRNDVLSFHCGIDNTMLMRA
                     SKLVAAATSFPVQYNKAIVGRNAFAHESGIHQDGMLKNAQTYEIMTPESVGVKQTSLV
                     MGKHSGRHAFVHKLEELGYELAGNQLEDAFVRFKALADRKKQIYDEDIEALVDEEIAH
                     AHDRIKVLSLTVIAGTMGPQTATLTLDIDGEHVTTQSTGNGPVDAIFKAIRALVPHEA
                     TLELYQVHAVTGGTDAQAEVSVRLSENGRSFAAKGADLDTLVASAKAYLGALNKLMSK
                     RSKTASVERRIHSTDVG"
     gene            2262..2945
                     /locus_tag="VIY07_15725"
     CDS             2262..2945
                     /locus_tag="VIY07_15725"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HEY6383239.1"
                     /translation="MKANTLDHQAWVRSALFVVAMAALLFVPAGSLDFWQGWLFGLVF
                     VAATTAISIYFLKHDPKLVERRMRAGPLAEDRLSQKIIMAITALGFVLALVLPGLDHR
                     WHWSAVPLWLVLVANAGVALAFVIFFIVLKQNRYAASTIRVEAGQPVVSSGVYSVVRH
                     PMYSGALLLLILTPLALGSFWTMLLIVPLVPVLIWRLLDEEYFLKQNQPGYVDYCRTT
                     RFRLIPRIW"
     gene            complement(2956..3663)
                     /locus_tag="VIY07_15730"
     CDS             complement(2956..3663)
                     /locus_tag="VIY07_15730"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEY6383240.1"
                     /translation="MKGAPSIFHIGRLDLSFAPKTWTFAAERRAEIDAYFEAVKREKP
                     TLWNGRVLLLHRQVVEQGVLRGQYLETDYASFAAWRHWGRPAAGVRDCFSAAAVRSAD
                     GAFLLAVMGLHTFNAGRIYFPCGTPDPDDVVADKVDLDLSVRRELKEETGLDITEFDA
                     EAGWEMVVDGPLIALIKVLRSTEKAIALRERVRAHLAREEKPELADVRIVRGQSDFDH
                     AMPDFVRAFLTARFATD"
     gene            complement(3660..>3943)
                     /locus_tag="VIY07_15735"
     CDS             complement(3660..>3943)
                     /locus_tag="VIY07_15735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal kinase"
                     /protein_id="HEY6383241.1"
                     /translation="IDLLASDAGGCFMVRTPRLPLAVNGAGDAIAALFFAHYLRTAEI
                     GEALSCASSAIFGVLAKTVEAGGQEIQLIAAQDEFVQPSRLFEARDVGR"
BASE COUNT          739 a         1194 c         1153 g          857 t
ORIGIN      
        1 gtgtgccccg gtgacctcca tggcgcgcgc ttgtgagaaa ttcggcaaca agccggtgat
       61 cgcgagcgcg aacacgcccg cgcagataaa tttcttcatt ctgatgagtc cccaaacctt
      121 tgagtgggtg atggccggca gatacctgcg aatttggccg tcaaagcgaa cgaaatgcgg
      181 acaaaatgtg attttgtgct tttatctgga acaaaacgcc gatttggtaa acgccgcagc
      241 tcaatttaag aagccgcgac gttcacaaga tgtgactcta tgtttcaccc gacatcggtc
      301 gaatgaatcc gccgctcgac agaagctgtc ttgctgcgct tgctcatgag tttgttcagc
      361 gcaccgagat aggccttcgc ggaggccacc agcgtgtcaa gatcggcacc cttggcggca
      421 aacgatcgac cgttttccga cagtctgacc gacacctcag cctgcgcatc ggtgccgccc
      481 gtcacggcat gcacctggta gagctcgagc gttgcctcgt gcggcaccag ggcgcgtatc
      541 gccttgaaaa tcgcatccac cggcccgttg ccggtcgact gggtggtgac atgctcgcca
      601 tcgatatcga gggtgagcgt cgcggtttgc ggacccatgg tgccggcgat taccgtcaaa
      661 gacagcacct tgatgcggtc gtgagcgtgc gcgatttctt cgtcgacaag ggcttcgatg
      721 tcctcgtcgt aaatctgctt tttgcgatcg gccagcgcct tgaagcggac gaatgcatcc
      781 tcaagctggt tgccggcaag ctcgtaaccc agctcctcga gcttgtggac gaaagcgtgg
      841 cgcccggaat gcttccccat caccagggag gtctgcttca cgccgaccga ctccggcgtc
      901 atgatttcat acgtctgcgc attcttcagc atgccatcct ggtggatgcc gctttcgtgc
      961 gcgaacgcat ttcgcccgac gatcgccttg ttgtactgca ccgggaatga cgtggccgcc
     1021 gcgaccaact tggatgcgcg catgagcatg gtgttatcga tgccgcagtg gaacgacagc
     1081 acgtcgttgc gcaccttcat cgccatcacg acttcctcga gcgcggcatt gccggcccgc
     1141 tctccgattc cgttgatggt gcattcgatt tgccgtgcgc ccgccttcac gccttccagc
     1201 gagttggcga ccgccattcc gaggtcattg tggcagtggg tcgagaaccg cgctttatcg
     1261 gcgttcggaa cccgcgagcg caacatgtcg atcagcgcaa aatattcttc cggcaccgta
     1321 taaccgacgg tgtcgggaat attgattgtg gtcgcgccgg cattgattgc cgcttccacg
     1381 caacgacaga ggaagtcgtg ctcggttcga gtagcatcct cggctgacca ctcgacatcg
     1441 tcggtgtagc cgcgcgctcg cgtgacctgg gcgactacca tttcgaagac ctcgtgcggc
     1501 tccttctgga gcttgtattt catatgcacg ggcgaggtgg agatgaacgt gtggatgcgc
     1561 ttgcgcctgg ccggcttgat cgcctcggcg cagcggtcga tgtccttgaa ggcagcacgc
     1621 gcgaggccgc agatgacggc cttcttcgac cgctgagcta tctcctgcac ggccgcgaaa
     1681 tcgccttcag aagcgatcgg gaagccagcc tcgatgatgt cgacacccat ggcgtcgagc
     1741 agctcggcaa cctcgagctt ttcttcgtgc gtcatggttg cgccgggaca ttgttcgcca
     1801 tcgcgcaagg tcgtgtcgaa tatgacgacg cggtccttgt cggacttgga gttgctggtc
     1861 atgaaaaatc gtccttctcg tggatgcgcc acttcggcgc tctatgggtt ctccgtcaga
     1921 tcccccgagt gcccaggcac atatgcccag ccggccctca ggggcggata aggagaagga
     1981 gcgtgcccag aatgagggag gccgcggagc cggcgtcgcc cgccgtccga tcgatcgcgc
     2041 aaatttgtgg gcgcgtcgtg atcacaagtt ccctcgttcg tcggttcgcc tcgcggattc
     2101 aggtaaagtc cgcgttaacc gcagcggcct gcttttaccg gaaagcgacc ggccaaatca
     2161 agcgcccgcg ataggtcaga accgctgcca attcgcgcga taaatgcgaa gcttgtacga
     2221 ccccgccggg gtttatgtca cggaggacgg aggtcaatga cgtgaaagcg aacacgctgg
     2281 atcatcaggc ctgggtgagg tcggctctat tcgtcgtagc gatggccgcc ctgctgttcg
     2341 ttccggcagg ctcattggat ttttggcagg gttggctctt tggcttggtg ttcgtcgcag
     2401 ccacgacggc gatcagtatc tatttcctta aacatgaccc caagctggtc gaacggcgca
     2461 tgcgtgccgg gccgttggcc gaggacagac tttcgcaaaa aatcatcatg gccatcacgg
     2521 cgcttggatt cgtgctggcg ctggtgctgc cgggtctgga ccatcgctgg cactggtcgg
     2581 ccgtaccgct ctggctcgtt ctcgttgcca acgccggggt agccttggcc ttcgtcatct
     2641 tttttatcgt gctcaaacag aaccgctatg ccgcttcaac aatcagggtc gaggcaggcc
     2701 agccggtggt ctcatccggt gtttattccg tcgtcaggca tccgatgtat tcgggtgccc
     2761 tgctgttgct cattctcact ccgctggcac ttggctcgtt ctggaccatg ctgctcatcg
     2821 ttccactagt tccggtgctg atttggcggc tgctggatga ggaatacttt ctgaagcaga
     2881 accagccggg ctatgtcgat tattgccgaa ctacccgatt tcggctgatt ccacgcatct
     2941 ggtagttgta gtttctcaat ccgtcgcaaa tcgcgccgtc agaaacgccc gcacgaagtc
     3001 gggcatggca tgatcaaaat cgctctgccc ccgaacgatg cggacatcgg ccaactccgg
     3061 tttttcctct cgcgcaagat gggcacgaac acgttcgcgc agggctattg ctttttcggt
     3121 cgaacgcaaa accttgatca acgcgatcag cgggccatcg acaaccatct cccagcccgc
     3181 ctcggcatcg aactcggtga tatcgaggcc ggtttcttcc ttgagctctc gcctcacgct
     3241 cagatcaaga tcgactttgt cggcgacgac gtcgtcggga tccggcgtgc cgcaggggaa
     3301 atagattctg cccgcgttga atgtgtgcag gcccatcacg gcaagcagga atgcgccgtc
     3361 tgcactgcgc actgccgcgg cactgaagca gtcgcgtacg ccggcggctg gcctgcccca
     3421 atggcgccag gcggcaaagc tcgcatagtc cgtttccaga tactggccac gcagcacacc
     3481 ttgctcaacg acctgacgat gcaacagcaa gacgcggccg ttccatagtg tcggcttctc
     3541 gcgtttcacc gcctcgaaat aggcgtcgat ctcggcgcgc cgttcggcag cgaaggtcca
     3601 ggtttttggc gcgaacgaaa gatcgagccg gccgatatga aagatcgatg gcgccccctt
     3661 catcgaccaa catctcttgc ttcgaagagg cggcttggct gcacgaattc gtcctgcgcg
     3721 gcaatgagct gaatttcctg ccctcccgcc tcgacggttt tcgccagcac gccgaatatt
     3781 gccgaagatg cgcacgacag cgcctcgcca atctctgcgg tccgtaggta atgcgcgaaa
     3841 aaaagtgccg cgatggcatc gcccgcgcca ttcactgcca gcggcagccg cggggtgcgg
     3901 accatgaagc aaccgcccgc gtccgaggcg agaagatcga tac
//
LOCUS       DATDHO010000807         2862 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_436878, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000807 DATDHO010000000
VERSION     DATDHO010000807.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2862
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436878"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(108..1379)
                     /locus_tag="VIY07_15740"
     CDS             complement(108..1379)
                     /locus_tag="VIY07_15740"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY6383242.1"
                     /translation="MHDRTAKQAAVKPVEQPPGFAKRHKHFPTTAWLRRRAPRKVPLF
                     AFEYGDTGAGNDVGIAHNWAAFDGVEIVPRYGVMPSLPPVDVKLFGRSYAAPIGVAPM
                     GGPSLVWPGADLLMAKAAQRARVPYTLSVAGGATIEQAAEVAPDVFWLQLYRFWHDDH
                     KIGFDLVRRAKAVDAKVLVLTLDVPVRTTRSRETYAGLAHEFRPNVRMIYEMMVRPRW
                     LFALLRHGYPRFATISEYAPTGASTNEIIAFARARMGGAFSWEEVKRYRDAWKGPMAV
                     KGILHPDDAEKALALGIEGIWVSNHGGRQIEALVPSIDVLPAIVAAVGKKATVLLDSG
                     VRSGQDIMRALALGADAAFAGKSFLWAVGALGDNGPDYLINLYIDELRASLGQIGALS
                     VEEARAATVRHPGAIMFTDNTRALSAPRKKR"
     gene            complement(1465..2454)
                     /gene="thiL"
                     /locus_tag="VIY07_15745"
     CDS             complement(1465..2454)
                     /gene="thiL"
                     /locus_tag="VIY07_15745"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEY6383243.1"
                     /translation="MTADDKMSAEDRLIARFFKPLATHPGALGLSDDAAFLSPPPGCD
                     LVLKADAIVGGVHFFPDDAAHDVARKALRVNLSDLAAKGAQPLGFLLSLALPTETADE
                     WLERFAEGLGADAALFGCPLFGGDTDRTRGPVVISIAMIGSVPEGTMVRRAGARPGDR
                     IYVSGTIGDAALGVQLRKGKSWKLSELQRQHLFSRYLLPQPRNALAEAVRTHASAAMD
                     VSDGLVGDFAKLCRASGVAANIDVGRIPLSEAAKAVIAADSTALEFALTGGDDYEIAC
                     TVPADQSASFQAAAKTAGVAVTEIGQIKSGEGARFLASNGEALTFKRASFSHF"
     gene            complement(2459..>2862)
                     /gene="nusB"
                     /locus_tag="VIY07_15750"
     CDS             complement(2459..>2862)
                     /gene="nusB"
                     /locus_tag="VIY07_15750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEY6383244.1"
                     /translation="LAGSGLNEILAEFESHWIGREVEGAQYLPAEAAFFRDIVSGVVR
                     EQRDLDPLIDEALSKSWPLKRIEAVLRAALRAGAYELIHRLDVPARVVVAEYADVAAA
                     FVERDETGMVNAVLDQLARRLRSGEFDRATG"
BASE COUNT          571 a          911 c          863 g          517 t
ORIGIN      
        1 gccggtgcag agcagcattg atcagggcaa gtccgaaacg gtcattctcg ccgaaacggg
       61 aatcgagtgc cggagcacgc gcttacgctg ggacggaagc ggagagacta tcgttttttc
      121 cgcggagcgc tgagcgctcg agtgttgtct gtaaacatta tcgctccggg atgacgtacg
      181 gtcgccgccc tcgcctcttc gaccgacagc gcgccgatct ggccaagaga cgcacgcagt
      241 tcgtcgatat acagattgat cagatagtcg ggaccgttat cgccgagcgc gccaaccgcc
      301 cacagaaatg atttgccggc aaacgccgca tcggcgccga gcgccagggc acgcatgatg
      361 tcctggccgc tgcgcacgcc actgtcgagc aaaactgttg ctttttttcc gaccgccgca
      421 acgatcgccg gcaaaacatc gatcgacggc accaacgcct cgatctgtcg accaccgtgg
      481 ttggaaaccc agattccctc gatgccgagc gccaatgcct tctcggcgtc gtccggatga
      541 agaatgccct tgacggccat cgggcccttc cacgcgtcgc gataacgctt gacttcctcc
      601 cacgagaaag cgccgcccat gcgcgcgcgc gcgaaagcaa tgatttcgtt ggtgctggct
      661 cccgtcggcg cgtactcgct gattgtcgcg aaacgcggat agccgtgacg caacagcgcg
      721 aacagccatc tcggccgcac catcatttcg tagatcatgc gcacattcgg acgaaattcg
      781 tgcgcgaggc cggcataggt ttcgcgcgag cgggtcgtgc gcaccggaac gtcaagcgtg
      841 agcacaagca ccttggcgtc gaccgctttg gcacgccgca cgagatcgaa accgatcttg
      901 tggtcgtcat gccagaaccg gtagagctgc aaccagaaca cgtcgggagc gacttctgcg
      961 gcctgctcaa tagtcgcgcc gccggcgacg ctgagcgtat acggaacgcg cgcccgttgt
     1021 gccgcctttg ccatcagcag atccgcgccc ggccacacca gcgatggtcc acccatcggc
     1081 gcaacgccaa tgggggccgc atagctgcgg ccgaaaagct tgacgtcgac tggcggaagg
     1141 ctcggcatga cgccgtagcg cggcacgatt tcgacaccgt caaatgccgc ccaattatga
     1201 gcgatgccga catcgttgcc ggcgccggta tcgccatatt cgaaagcgaa aagtggaacc
     1261 ttgcggggcg ctcttcggcg cagccaggcc gttgtcggaa aatgcttgtg gcgtttggca
     1321 aagccgggag gctgttcgac aggcttcacc gccgcctgct tggctgtcct gtcatgcatc
     1381 gcgaatttcc tgttccttca atttgcatta tacaggcgcc gtgcacacaa gttctaccgg
     1441 gcggaattgg tccggatgca caatctaaaa atggctgaac gaggcacgct tgaacgtcaa
     1501 cgcttcgcca tttgacgcga gaaagcgcgc gccctcaccg ctctttatct gtccgatttc
     1561 cgtgacggca acacccgcgg tcttcgctgc ggcctgaaag ctcgcagatt ggtccgccgg
     1621 aacagtgcag gcgatctcat agtcatcgcc gcctgtcagt gcgaactcga gagcggttga
     1681 atcagcagct atgacggctt tcgccgcttc cgaaagcggt atccgaccga catcgatatt
     1741 ggctgccacg ccggatgcac ggcaaagctt ggcaaaatcg ccgacaaggc catcggacac
     1801 atccatcgcc gcggaggcgt gtgtgcgcac tgcttccgcc agtgcattgc gcggctgagg
     1861 caggaggtag cgcgagaaaa gatgctgtct ttgtagctcg ctcagtttcc aactctttcc
     1921 tttgcgcaac tgaacgccga gggccgcatc gccgatggtg ccgctcacat agatacggtc
     1981 acccggcctg gcgccggccc gccggaccat cgtgccttcg gggacgctgc cgatcatggc
     2041 gatcgaaatc acgaccggtc cacgtgtgcg gtcggtgtcc ccaccaaaaa gcgggcagcc
     2101 gaacagcgcc gcatcggcac caagcccttc ggcaaatcgt tcgagccatt cgtccgcagt
     2161 ttcggtaggg agcgcgagag agagcaggaa gcccagcggc tgcgcgcctt ttgcggcaag
     2221 gtcggacagg tttacgcgca acgccttgcg cgccacgtca tgtgcggcat cgtcagggaa
     2281 aaaatgcacg ccgccaacaa tggcgtcggc cttgagcacc aggtcgcatc cgggcggcgg
     2341 gctgagaaaa gcggcgtcat ctgagagtcc cagcgcgccg ggatgcgtgg cgagcggctt
     2401 gaagaaacgc gcgatcaggc gatcctcggc cgacatcttg tcgtccgccg tcatcatttc
     2461 acccggtggc acggtcgaac tcgccgctgc gcaagcgccg cgcgagctgg tcgagcacag
     2521 cgttgaccat tcctgtctcg tcgcgctcga cgaaagcagc ggcaacgtcg gcatattcgg
     2581 ctacgacgac gcgcgctgga acatcgaggc ggtggatcaa ttcgtaggcg ccggccctta
     2641 gagccgcgcg cagaaccgct tcgatgcgct taagcggcca gcttttcgac agcgcctcat
     2701 cgatcagggg atcgagatcg cgctgctcgc gcaccacgcc cgatacaata tcgcgaaaga
     2761 acgccgcctc ggccggaaga tattgcgcgc cctcgacctc gcggccaatc cagtggctct
     2821 cgaattcggc aaggatttcg ttgaggccgc tgcctgccag at
//
LOCUS       DATDHO010000808         2680 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_289155, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000808 DATDHO010000000
VERSION     DATDHO010000808.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2680)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2680)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2680
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289155"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            187..561
                     /locus_tag="VIY07_15755"
     CDS             187..561
                     /locus_tag="VIY07_15755"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEY6383245.1"
                     /translation="MNDRPETHRLDIVIPVYNEGANIVPTLRAIAREVKTTSRVLICY
                     DHEDDDTLPAIKKHSDQFDVLTIMFVRNRGRGAHGAVLTGFSASEAPFVLVYPADDDY
                     NVHAGRQHGRLPVAQGFPSACR"
     gene            complement(545..706)
                     /locus_tag="VIY07_15760"
     CDS             complement(545..706)
                     /locus_tag="VIY07_15760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383246.1"
                     /translation="MTLHKQLDAVAEAAVGLDCDFIQCPAREEAKAITGIVRRHASDA
                     VEREVTGTH"
     gene            899..1450
                     /locus_tag="VIY07_15765"
     CDS             899..1450
                     /locus_tag="VIY07_15765"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEY6383247.1"
                     /translation="MTWPKIIRRSTTRMSPWIDIIEREVQFNPGTATESYHAVGQDDY
                     IAIVARTPDGRFPIIRQYRPALERFTWEFPAGMVDKGEAPEECCRRELLEETGFPARS
                     VHALGSYAPCTARLSNHIHSFFVETGSRGDNPAVEPGIELNLATPQELLALILAEEFV
                     LQLHIGALLLAGMRGYLDLASFR"
     gene            1564..>2680
                     /gene="hemA"
                     /locus_tag="VIY07_15770"
     CDS             1564..>2680
                     /gene="hemA"
                     /locus_tag="VIY07_15770"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003870 - 5-aminolevulinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HEY6383248.1"
                     /translation="MDYRGYFASALDRLRHERRYRVFADLERIAGRFPHAIWHSPQGQ
                     RDVVIWCSNDYLGMAQHPKVIGAMVDVAARMGTGAGGTRNIAGTNHPLIELEREIADL
                     HGKPAALVFTSGYVSNETGIATIAGLLPNCLLLSDALNHNSMIEGVRRSGCEKRIWRH
                     NDLGHLEELLKAADPARPKLIVFESLYSMDGDIAPVHAICDLAERYGAMTYCDEVHAV
                     GMYGPRGGGICDRDKAMTRVDVIEGTLAKAFGCLGGYIAASEEVVDAVRSYAPGFIFT
                     TALPPAICAAATAAIRHLKTSNWERERHQERAARVKAMLDAAGLPVMPSTTHIVPLLV
                     GDPERCKAASDLLLSEHGIYIQPINYPTVPRGMERLRI"
BASE COUNT          523 a          793 c          811 g          553 t
ORIGIN      
        1 tatcgttacg tcgcttcacg ccggactcgc gtcttcctgc cgatttacaa tttcatcgac
       61 aatgctgtct ttaatctctc gttgatgaag ctgctacggc ctttcgtact gaccagcgga
      121 gagaagccat gagcatgcga cggcgcgaga aagcgggtcc gatcgccacg ccacgaattc
      181 cgtccaatga acgatcgtcc tgagacgcac cgcctggaca ttgttatccc ggtctataat
      241 gagggcgcca acatcgtgcc gacgttgcgc gctatcgcgc gtgaggtgaa gacgacaagt
      301 cgagtattga tttgctacga ccatgaggat gatgacaccc ttccggcgat caagaaacat
      361 agcgaccagt tcgacgtact cacgatcatg ttcgtccgca accgcggccg tggtgcgcat
      421 ggggccgtgc ttaccggatt ttccgccagc gaggcgccat ttgttctcgt gtaccccgcc
      481 gatgatgact acaacgttca tgccgggcgg cagcatggtc gattgcccgt ggctcaaggc
      541 tttcctagtg cgtgccggta acttcacgct ccaccgcatc gctcgcgtgc cgacgcacga
      601 tgccagtaat ggctttcgcc tcttctcgcg ccgggcattg gatgaagtca caatcgagtc
      661 cgaccgcggc ttctgctaca gcatcgagct gcttgtgaag tgtcaccggc tcggctggcg
      721 cataggagag gtgccggcgc gctggtttca gcgcgcacac ggatccagtc gatttcaggt
      781 gatacgatgg ttgccccact atctgcgttg gtacgcttac gcgtttgcga caacctatct
      841 gatgcgccca gcggaaagcg tgccccgcag gcacacggtt tagcatggat tggtgaacat
      901 gacctggccg aagattatca ggcgcagcac gacgcgaatg tcgccgtgga tcgacatcat
      961 tgagcgtgaa gtccaattca accctgggac ggcaaccgaa tcctatcatg ctgtcgggca
     1021 ggatgattac atcgccatcg tggcccgaac gccggatggg aggtttccca tcattcgtca
     1081 atatcggcct gcgttagaac ggttcacatg ggaattcccc gccggcatgg tggacaaggg
     1141 agaggcgccg gaggaatgct gccgccgcga gctgcttgag gaaaccggtt ttccggcccg
     1201 gtcggtgcat gcgcttggga gctacgcccc gtgcacggcg cgcctttcga accacattca
     1261 ctcgttcttt gtcgaaacgg ggtcgcgcgg cgataacccc gcggtcgagc cgggcatcga
     1321 attgaacctg gcgacgccgc aagaactgct tgcgctcatt ctggcggaag aattcgtgct
     1381 gcaattgcat attggcgcgc tgctgcttgc cggcatgcgc ggatacctgg atctcgcatc
     1441 gtttcgatag gacttaggta ttaaccgcga tcaatgcgca atccggcgat tgcgacgaat
     1501 ctcgcctcga caagtaccct ggaacccttc taaaaggtgc cgcggggcgg gaaagtaagg
     1561 attatggatt acaggggtta ttttgcgtct gccctcgacc ggttgcggca cgaacggcgt
     1621 tacagggttt tcgcggatct cgagcgtatt gccgggcggt ttccacatgc tatctggcat
     1681 tcgccccagg gccagcgcga tgtcgtgatc tggtgctcaa acgattatct cgggatggcg
     1741 cagcacccca aggtgatcgg cgccatggtc gatgttgccg cgcgcatggg taccggcgca
     1801 ggcggcaccc gaaacatcgc cggcacaaat catccgctga tcgagctgga gcgagaaatc
     1861 gccgaccttc acggcaagcc ggctgcgctg gtcttcacgt cgggatacgt ctcgaacgaa
     1921 accggcatcg ccacgatcgc cgggttattg ccgaactgcc tgctgttgtc cgacgcactc
     1981 aaccacaatt caatgattga aggcgtgcgc cggtccggct gcgaaaaacg gatctggcgt
     2041 cataacgatc tcggtcatct cgaagagctg ctcaaggcag ccgatccggc gcgcccgaag
     2101 ctgatcgtgt tcgagagcct ttattccatg gacggggaca tcgcgcccgt tcacgcaatt
     2161 tgcgatcttg ccgagcggta cggggcgatg acctattgcg acgaagtcca tgccgtcggc
     2221 atgtatggac cgcgtggcgg cggcatttgc gaccgtgaca aggccatgac gcgcgttgac
     2281 gtgatcgagg gcaccctggc caaggcgttc ggctgtctgg gcggctacat cgcagcaagc
     2341 gaggaggtgg tggacgccgt gcgttcctat gcgccgggtt tcatcttcac gactgcgctg
     2401 ccgccggcaa tctgcgctgc ggctacggcg gccatccgcc acctgaaaac gtcgaactgg
     2461 gagcgcgagc gacaccagga acgagcggcc cgggtcaaag cgatgctcga cgcagctggt
     2521 ttgccggtca tgccgagcac gacacacatc gtgccgctgc tcgttggcga tcccgagagg
     2581 tgcaaagcag cgagcgatct gctgctgtcc gagcatggca tctacattca gcctatcaat
     2641 tatcccaccg tcccgcgcgg catggagcgg ttgcgcatca
//
LOCUS       DATDHO010000809         2693 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_436908, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000809 DATDHO010000000
VERSION     DATDHO010000809.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2693)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2693)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2693
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_436908"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1764)
                     /locus_tag="VIY07_15775"
     CDS             complement(<1..1764)
                     /locus_tag="VIY07_15775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007595636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEY6383249.1"
                     /translation="MKIVSHWVWLCALFILTGGPAWAAEGGKGASEAIFICQIVVLMV
                     VGRLLGEAMLRLRQPAVMGQLIAGLILGPSLFGLLLPDLQHALFPKTPEQKAMIDAIS
                     QFGILLLLLLTGMETDLKLVRQTGRASLFASLMGIVIPFACGVVLGEMLPDSMLPDPQ
                     KRLITSLFLGTALSIASVKIVAMVVREMNFMRRVVGQVIIASAIIDDSIGWIIVSIIF
                     SLALHGSIEPIPLAQSILGTVLFMVASLTIGRRAVFFVIRWVNDNFVSEYAVITAILV
                     IMGIMALITHMIGVHTVLGAFVAGILVGESPILTRHIDEQLRGLITAFFAPVFFGIAG
                     LSADLTILADPEIALFTAGLVLVASLGKFGGAFLGAELGGLTRREGLALACGMNARGS
                     TEVIIATVGLSMGALNQNLFTMIVAMAVVTTMAMPPTLRWALSRIPMRKEEKQRLERE
                     ELEQRGFVPNLERLLVAVDDSPNGKFALGIAGVLAGTHGMPATVVHVPDPSKIESTMP
                     ESPEKMAAGAAKPLEKTPDQKRSNEDSKKADEPGEKAEKEEKNEEVRDTVQQAAAQIK
                     NRQKKEEKASDRVDVTTVVHEQ"
     gene            2002..>2693
                     /locus_tag="VIY07_15780"
     CDS             2002..>2693
                     /locus_tag="VIY07_15780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEY6383250.1"
                     /translation="MDARIEPTAIVEPAGWRRERTRPPLAEVFGSIATRPTGSLGKKL
                     VAFLGPGYLVAVGYMDPGNWATSLAGGSKFGYALLTIALLSNLMAILLQALCARLGIA
                     TGRDLAQACRDAFPRAVSWPLWVLAEVAICATDLAEVIGTAIGLNLLFGIPLEIGVVL
                     TALDVFVVLWMQNLGFRYVEIFVVTLLGIITACFAIQIAMADPDWGAVIRGFAPTTEI
                     VTNPEMLYLALG"
BASE COUNT          528 a          834 c          784 g          547 t
ORIGIN      
        1 ctgctcgtgg acgaccgttg ttacatccac ccgatcggag gccttctcct cctttttctg
       61 cctattcttg atctgggcag ccgcctgctg gacagtatcg cgcacttctt catttttttc
      121 ttccttctct gctttctcac cgggttcatc tgcttttttg ctgtcctcgt tggacctttt
      181 ttgatccggt gttttttcca gcggcttcgc ggcacccgcc gccatctttt ccggagattc
      241 cggcattgtg ctctcgatct tgctcgggtc aggcacgtgc acaaccgtcg ccggcatccc
      301 atgcgtgccc gcgagtacac cggcaatgcc caaggcgaat ttgccattcg ggctgtcgtc
      361 caccgcgacc aggaggcgtt cgaggttcgg cacgaagccc ctttgctcga gctcctcccg
      421 ctcaagccgc tgcttttcct ccttgcgcat cgggatgcgg ctgagcgccc atcgcagcgt
      481 cggcggcatg gccatggtgg tcaccaccgc catggcgaca atcatggtga aaaggttctg
      541 gttgagtgca cccatcgaaa gcccgacggt ggcaataatg acctcggtcg agccgcgcgc
      601 gttcattccg caggccagcg caaggccttc gcgccgggta agcccgccga gctcggcacc
      661 caggaaagcg ccgccgaatt tgcccaggct ggcgaccagt acaagtccgg cggtgaacag
      721 agcaatctcc ggatcggcca ggatagtcag gtcggcgctc aagcctgcga tgccgaagaa
      781 aacgggcgca aaaaatgcgg tgatcaagcc gcgcaattgt tcgtcgatgt ggcgcgtcag
      841 gatcggagat tcgccgacga ggatgccggc gacaaacgcg ccgagcaccg tgtgcacgcc
      901 gatcatgtga gtgatcagcg ccatgatgcc catgatgacg agaattgcgg tgattaccgc
      961 gtattcgctg acgaaattat cattcaccca gcgaatgacg aaaaacactg cgcgtcgccc
     1021 gattgtcagg ctcgccacca tgaacaggac tgtgccaaga atgctctgcg ccagcgggat
     1081 cggttcgatc gagccgtgca gcgcaaggct gaagatgatc gatacaatga tccagccgat
     1141 gctgtcatcg atgatggccg acgcaatgat tacctggcca acgacacggc gcatgaaatt
     1201 catttcgcgc acgaccatcg ccacgatctt gactgatgcg atcgagagcg ccgttccgag
     1261 aaatagcgat gtaatcagcc gcttttgcgg atcgggcaac atgctgtcag gcagcatctc
     1321 gccaagcacg acaccgcaag caaacggaat gacgattccc atcagcgaag cgaacaacga
     1381 ggcgcgaccg gtctgccgca cgagcttgag gtcggtctcc attccggtga gcaagagcaa
     1441 cagcaggata ccgaactgcg agatcgcatc gatcatcgct ttttgctcgg gagttttcgg
     1501 aaagagcgca tgctgaagat cggggaggag caggccaaaa agggatggcc cgaggatcag
     1561 gcccgcgatc agttggccca tcacggccgg ctggcgaagt cgcagcatcg cttcgccgag
     1621 cagacgaccg accaccatca gcacgacgat ctggcaaata aaaattgctt cggatgcgcc
     1681 cttgccgccc tcagcggccc aggccggccc acccgtcaga atgaacaagg cgcaaagcca
     1741 aacccagtgg ctgacaatct tcatgatcgc agcgacgctc ctggtagggc cggccgcatg
     1801 ctacaggcca gctcagggcg gtgcttgcgc cgcacccggg acggctagac caccgcgatg
     1861 ccggaccgtc cttgaattgc gtgtcgcaag tccctgacaa ctcgaaggga ttccaaatgt
     1921 tccggcagca aatgcaattg caaacgattt gcaactggtt atattaggtc tgaatcaaca
     1981 atgctttttt agaacgttcg aatggatgcg cgcatagagc cgactgcaat cgtggagcca
     2041 gccggctggc ggcgtgagcg tacccggccg ccactcgccg aggtgttcgg ctccatcgcg
     2101 acgcggccga ccggatcgct cggcaagaag ctcgtggcct ttctcggccc cggctatctg
     2161 gtcgcggtcg gatacatgga tcccggcaat tgggcgacct cgctcgccgg cggctcaaag
     2221 tttgggtacg cgcttctcac catcgcgctg ctctccaacc tgatggccat tctgctgcag
     2281 gcgctctgcg cgcggctggg catcgccacg ggacgggatc ttgcgcaagc ctgccgcgac
     2341 gctttcccgc gcgccgtgtc atggccgctc tgggtgctgg cggaagtggc gatctgcgcc
     2401 accgacctcg ccgaggtcat cgggacagcg atcggcctca atctgctttt cggcattcct
     2461 ctcgagattg gcgtcgtgct cactgcgctc gacgtcttcg tcgtgctgtg gatgcaaaat
     2521 ctcggtttcc gctacgtgga aattttcgtg gtcacgctgc tcggcatcat tacggcctgt
     2581 ttcgcaatac agatcgcgat ggcggacccg gattggggag ccgtgatccg cggctttgcg
     2641 cccacgactg aaatcgtcac caatcccgag atgctctatc tcgcgctcgg cat
//
LOCUS       DATDHO010000810         3249 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_190270, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000810 DATDHO010000000
VERSION     DATDHO010000810.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3249)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3249)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3249
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190270"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(374..1147)
                     /locus_tag="VIY07_15785"
     CDS             complement(374..1147)
                     /locus_tag="VIY07_15785"
                     /inference="COORDINATES: protein motif:HMM:NF024934.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY6383251.1"
                     /translation="MIASGDTQRSNALSTEGLRKHNGCLSALSPAALSTLKPHLTEAT
                     LPEGAILWDAKRPTTDVYFPISGLISIVLAMPDGECVEVGSVAREAAAGLAFDGEQAT
                     LLTRGVVQIGGKFIRIGRTQLLSAAGKNCEIDQLITFCRDWILLQAQQIAACNAIHPA
                     DKRFCRWIFECGLRMEADTLQLTQEAIASVLGIRRTTVTLIAQTLQAHGSIHYGRGRI
                     SISDRTALRSAACECCDVLGERHWPSTRLRALGVPTQSS"
     gene            complement(1200..2045)
                     /locus_tag="VIY07_15790"
     CDS             complement(1200..2045)
                     /locus_tag="VIY07_15790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEY6383252.1"
                     /translation="MSYLQTLPRRLVTLYLPLSIILLVLLFPFYWMALTAIKPDEQLL
                     DLERFNPFWTWTPTLKHFQKLLFETHYPLWLWNTMFVAIGATILSIVSSVLAAYAIVR
                     LRYKGAQWVGGAIFLAYLVPPSILFIPLSSVVFQYGLFDTPFALIMTYPTILIPFSTW
                     LLMGYFKTIPFELEECALIDGASRWQILTKIVLPLAVPGLISAFIFCFTLCWNEFIYA
                     LTFLSTTSQKTVPVAIVNEFVDGDIYRWGSLMAGALAGSLPLVVLYAFFVEHYVSAMT
                     GAVKE"
     gene            complement(2122..3066)
                     /locus_tag="VIY07_15795"
     CDS             complement(2122..3066)
                     /locus_tag="VIY07_15795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEY6383253.1"
                     /translation="MTDVALKPLLREPTAWNRLKVNRDWLGLWFMLPAAAFLLLFLAY
                     PLGLGIWLSFTDARIGRSGNFVGIENYVWLWDDSVFWLSVFNTLLYTSVASVFKFAIG
                     LYLALLLNQHMPFKAIIRAIVLIPFIVPTVLSAIAFWWIFDSQFSIVSWSLRKLGLIA
                     TNIDFLGDTWNARWSVIFANIWRGVPFVAITLLAGLQTVSPSLYEAATIDGASRWQIF
                     RHITYPLLTPIIAVVMTFSVLFTFTDFQLIWVLTRGGPANATHLMATLGYQRAIGGGY
                     LGEGSAIATAMIPFLLAAILISWFGLQRRKWQQGESND"
BASE COUNT          765 a          896 c          977 g          611 t
ORIGIN      
        1 tacgcgatgg ggatgcgcag gttgcgaaaa cacctcccga aaagacctgc gcttaaacgg
       61 gggagatcaa ataaagttcc ttgccaacag atatatcgga tgtgcggttt ggactcgggt
      121 gcagtcgatc ctgccgaaga gatagaatct agttgctgat aacgaagggc cgcgccccgt
      181 gggtgcgcgg ccctttagtt gcctctcgtc ctcttcgcgc gaacctctgg atcgggagat
      241 aaaggaacgt tcgcacgatc acgatagcaa cgtcacaaac ccggtgacgt tcccataatg
      301 agaaaatgtt acggggtctc gttgcgtcct aacgtcgagt tggcgacaca ggaaccgatg
      361 cctcgattgc atctcaggac gattgcgtcg gcacacctaa cgcgcgcagg cgggttgacg
      421 gccaatgccg ctcgccgaga acgtcgcagc attcgcatgc agccgatcgc agcgcggtcc
      481 gatccgaaat cgaaatcctg cctcgcccgt agtgaatcga tccgtgtgcc tggagcgtct
      541 gcgcaattaa tgtaaccgtc gtccgtctga ttcccagcac agaggcaatc gcttcctgcg
      601 tcaattgcag cgtgtcagcc tccatgcgca gaccgcactc aaaaatccag cgacaaaatc
      661 gcttgtccgc agggtgaata gcgttgcagg cagctatctg ctgcgcctgg agaaggatcc
      721 agtcccgaca aaacgtgatc aactgatcga tttcacagtt ttttccggca gccgagagca
      781 gttgtgttcg gcctatccga ataaacttgc ctccaatttg tacgacaccc ctggtgagca
      841 gggtcgcttg ctcgccatca aaggcaagac cggccgcggc ttcccgggca acgctgccca
      901 cctcgacgca ttccccgtcg ggcattgcaa ggacaatcga tatcaacccc gaaataggaa
      961 aatacacatc tgtggttggc cttttggcgt cccataagat cgcgccttcg ggcagggtcg
     1021 cttcggtgag gtgcggtttc aacgtcgaca gcgcggcagg tgaaagcgca gagagacaac
     1081 cgttgtgctt gcgcagtcct tcagttgaca gggcattgga ccgctgggtg tcaccggagg
     1141 cgatcatgtt agttgcactc ccgtattgga gcggcggcaa tcgaggtacg cagccggctc
     1201 tattccttca ccgcgccggt catcgccgag acatagtgct cgacgaaaaa tgcatagaga
     1261 accacgagcg gcaacgatcc tgcgagtgcg ccagccatca gagaacccca gcgataaatg
     1321 tcgccatcga cgaactcgtt gacgatagcg acgggcactg tcttttgcga agtggtggaa
     1381 agaaacgtca acgcgtagat gaattcattc caacacagcg tgaagcaaaa aatgaaagcc
     1441 gagatcagtc ccggcactgc cagcgggagc acaatcttgg tcaggatctg ccagcgactc
     1501 gcgccatcga tcaacgcgca ttcctcgagc tcgaagggaa tcgtcttgaa ataacccatc
     1561 agcagccagg tcgaaaacgg gatcaggatt gtcggatagg tcatgatcag cgcgaacggc
     1621 gtatcgaaca gtccgtattg gaacacgacc gacgataacg gaatgaacag gatcgacggc
     1681 ggcaccagat aggctagaaa gatcgcgcct ccgacccatt gcgcgccctt atagcgcagg
     1741 cggacgatcg cgtaggcggc aagcacgctg gagacgattg acaggatggt cgcaccgatt
     1801 gcgacgaaca tcgtattcca aagccacaaa ggataatggg tttcaaacag cagtttttgg
     1861 aaatgcttga gcgtcggcgt ccaggtccag aatggattga agcgttcgag gtcaagcaat
     1921 tgctcgtcgg gtttgatggc cgtgagtgcc atccagtaga aggggaacag caataccaga
     1981 aggatgatcg aaagcggcag atagagtgtg accagccgcc gcggcaatgt ctgcagatag
     2041 ctcatgcctt cggtatgatc ggcaacggcc gagctgccgt ggagcacggt ccttggatcg
     2101 gcgaccttcg gtacaaccgc gtcagtcatt gctttcgcct tgttgccatt tgcgccgctg
     2161 caatccgaac caggagatca ggatcgcagc cagcaggaac gggatcattg cagtcgcgat
     2221 cgccgaacct tcgccgagat agccgccgcc gatggcgcgc tgatagccga gcgtggccat
     2281 gagatgcgtg gcgttggcgg gaccgccgcg cgtcagcacc cagatgagct ggaagtcggt
     2341 gaaagtgaac agcaccgaga atgtcatcac taccgcgatg atgggcgtaa gcagcgggta
     2401 agtgatgtgg cggaagatct gccatcggct cgcgccgtcg atcgtcgccg cctcgtagag
     2461 ggacggcgac accgtttgca gaccggcgag cagcgtaatg gcgacaaatg gcacgccgcg
     2521 ccagatgttc gcgaagatca ccgaccagcg cgcgttccag gtgtcaccga ggaaatcgat
     2581 attggttgcg atcagtccaa gctttcgcag cgaccaggac acgatcgaga actggctgtc
     2641 aaaaatccac cagaatgcga ttgctgacag cacggtcggc acgatgaagg ggatcagcac
     2701 gatcgcgcgg atgatcgcct tgaacggcat gtgctggttg aggagaaggg caaggtagag
     2761 accgatggcg aatttgaaca cactggcgac gctcgtgtag agcagtgtgt tgaagaccga
     2821 aagccagaac accgaatcat cccacagcca tacgtagttc tcgatgccca cgaaatttcc
     2881 actgcggccg atgcgggcgt cggtgaatga aagccagatg ccgaggccga gcgggtaggc
     2941 gagaaagagc agcaggaacg ccgcggccgg cagcatgaac cataggccga gccagtcacg
     3001 gttgaccttg agccgattcc aggcggtggg ctcgcgcagc aggggtttca aggcgacgtc
     3061 agtcatcggg tgatctttca gggcgtcatg cctgcttttg tcgcaggcat gacgcgtctt
     3121 tctttgcaac cagacttgga tggccgggac aaatccggcc aaggggtctc cctcctcagc
     3181 ggtagagccg catcgcctgc cgttcggcga tcttgattgc acccttggtg tcctcgcggc
     3241 cggtgcaga
//
LOCUS       DATDHO010000811         4896 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_85940, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000811 DATDHO010000000
VERSION     DATDHO010000811.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4896)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4896)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4896
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_85940"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..284
                     /locus_tag="VIY07_15800"
     CDS             <1..284
                     /locus_tag="VIY07_15800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383254.1"
                     /translation="QTPVRLVVSEGGVPQASRCWRYCTVGEVNSERADDGENTLNGLV
                     EKVDATSAPIPSLLLQRKLHLFSFGIDLRGLRDNRRQSFTIKVSCLRLI"
     gene            620..1294
                     /locus_tag="VIY07_15805"
     CDS             620..1294
                     /locus_tag="VIY07_15805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383255.1"
                     /translation="MRFAALATLGVLVVLPADALQQRQYASLTPTCDNDGRCTTLSTI
                     GPVSRAYDSGPEIKTTAPIPAARPQSRPLDANGNSAGSLVISRKTGARAHVGVAYAAR
                     FQAYIDDLENNHGARVLFMGGVRPGRCSPASEHPCGKALDVCQLSRGVVDGRCNLPGR
                     VALGRIAASHGLFEGGRWCNSDYGHAQIDVTAPACGERGVRVVQQRHREETIGIQQNM
                     ALGALH"
     gene            complement(1903..2577)
                     /locus_tag="VIY07_15810"
     CDS             complement(1903..2577)
                     /locus_tag="VIY07_15810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEY6383256.1"
                     /translation="MRAYPDKIRAHDNEFLILGSGLKFRTSDGRTNKTFEELLKEPDI
                     DDMFYARYPLGGAPAQPARNIDPGRVRFEPLFVAMYGDCNKNEVAKNLRQVRWLPKHA
                     GGSAAITEVNGVASALEAVSRELDELPGDLIRYVKRLAGTYNCRKIAGTDLKSMHAFG
                     AAVDINIRYANYWRWATGDQQPVWRNQIPIRIVRIFEKHGFIWGGYWHHYDTMHFEYR
                     PELMGR"
     gene            complement(2760..3176)
                     /locus_tag="VIY07_15815"
     CDS             complement(2760..3176)
                     /locus_tag="VIY07_15815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6383257.1"
                     /translation="MFGRILICAVVAVFAPVNIAAAQQQLPAATQQGATIKRTPLQKF
                     DVPGTNCETVIGMAEIVPNVNVGRHTHPGPESGYMVEGEFVLYVEGQPEKIVKAGQSY
                     QIPPGAIHDAKTGPSGPKVVATYVVEKGKPLASPAP"
     gene            3309..3782
                     /locus_tag="VIY07_15820"
     CDS             3309..3782
                     /locus_tag="VIY07_15820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cache domain-containing protein"
                     /protein_id="HEY6383258.1"
                     /translation="MVLVSRVSVVLSVAGGIVAFAFAPGAAGEWATKEDAVALVQQAT
                     ALIKQRGPEKAYPEISNRAGRFHDRDLYITVLDFNGKVLAHGLRGDLVGRNLIKAKDP
                     DGKLYIKERVETAREQSTFWQNYKWLNPATKEIEPQDAYCERLNDTAVCAAVYSF"
     gene            complement(3846..4196)
                     /locus_tag="VIY07_15825"
     CDS             complement(3846..4196)
                     /locus_tag="VIY07_15825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383259.1"
                     /translation="MPALTFLAVVGLTLVALLFVADATLTPGPPPIVTSERSGLPKPW
                     RPDTIQTLTSAPAPAPDMTLPDVLAAQPKPAALPKIGSAARAARAEAFPKNNRFAQPS
                     AYQQNLFDFSIKGQ"
     gene            4535..>4896
                     /locus_tag="VIY07_15830"
     CDS             4535..>4896
                     /locus_tag="VIY07_15830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6383260.1"
                     /translation="MIDHVGFSVSDYARSKAFYEKALLPLGYSLIMEVTAQATGMPAA
                     GFGSDGKPDFWIGGEGMVDKPLRIAIAAKDRASVDAFYRAALAAGGKDNGPPGVRSQY
                     HPNYYGVFDPDGHNIEAV"
BASE COUNT          950 a         1372 c         1504 g         1070 t
ORIGIN      
        1 ttcaaacccc tgtacggttg gtggtatcgg agggtggtgt gccgcaagct tcccgttgtt
       61 ggcgctactg cactgttgga gaggtgaaca gtgaacgcgc tgatgatggc gaaaacacgc
      121 tgaacggatt ggtcgaaaaa gttgacgcaa cgtcagcgcc gattccatct ctattgctgc
      181 agcgcaagtt acatctgttt agtttcggaa ttgatttgcg tggtttgcgc gataaccgcc
      241 ggcaaagctt tacgattaag gtttcttgct tacggttaat ttgaaatcga attgaaagag
      301 agtgcgcggc ttttattgtc ccggcccgaa cggttggccc gcaatgccgc gcatgactgc
      361 aagcaagcgt gacgttcttc ggatgctcgg cccgaagccg cggcctccat atgaggaggt
      421 ttggcacgtg tggaccgtgt tcatcccgag gcgatcgatc acaaatcgcc tcctgtgggg
      481 cacggttctg cgtcgtcgtg acgacggccg ctggatctac aaggaatatc tgggaagcat
      541 tgaagcgact gaataccgcg cgcgctcaac ggaaaacata gaacggccgc ttcacagccg
      601 gtctttctag gaggagagca tgaggtttgc cgcacttgcc acccttggtg tactcgtcgt
      661 gctgccggcg gatgcgttgc agcagcgtca gtatgcgtcg ctgacgccga cgtgcgacaa
      721 tgacgggcgc tgcaccactc tcagcacgat cggcccggtc tcgcgcgctt acgacagcgg
      781 gccggaaatc aaaaccacgg caccaatccc tgctgcgagg cctcagtcgc gcccgctcga
      841 tgccaacggc aacagcgcag gaagtcttgt catatcccgc aagacaggcg cgcgcgctca
      901 cgttggcgtc gcgtacgccg cgcgtttcca ggcgtacatc gatgatcttg aaaacaatca
      961 cggcgcgcgc gttctgttca tgggcggcgt tcgtcccggg cgctgttcac ccgccagtga
     1021 gcatccatgc ggaaaggctc tggatgtgtg ccagttgtca cgtggcgtgg ttgatgggcg
     1081 ctgcaatctg cccggtcggg tcgccctcgg ccgcattgcg gcttcgcacg gtctgttcga
     1141 aggcgggcgc tggtgcaatt cggactacgg ccacgcccag atcgatgtaa cggcacctgc
     1201 ctgcggcgag cgcggtgtgc gcgtcgttca gcaacggcat agggaagaaa cgatcggcat
     1261 tcagcaaaat atggcactgg gcgcgctaca ttgacgcgcc cagtccttgt tctcgcccgc
     1321 aatttgcaga attgcactta gcaggggggc aaggtcgcgg cggagccggt ttgcggcatg
     1381 ccggaggggg aggcggtgcc ggaacttgtg ccgctatccg ttcgcgaggt tgtcgccgat
     1441 ccggttgtgc tgctgcttcc gctcgccgat ccttgcatcg cgctcttcaa tttcactgtc
     1501 cggcggaatc gcggcaatgg gttgcagcgg aaactcccga ggtggccccg ggacttgccg
     1561 gaggcggcga ggtggtttgg gcaccggcgg cgaacacgcc tgcggtgaga aaaagggcag
     1621 caatgagaag ctttgacata acacttgtta ctccgttgcg ttcatttgag atttgagccg
     1681 ccgcgtgcaa ccggcacgct gcgtcatgct cattcggcgt gaccgcaaac ccgttcatgc
     1741 ggtcagacag caaacgttag gagttggctg aggttcctcc gtcatgaccc ccgttttacg
     1801 ggccgcgcca ggaagtccgg aaacgattgg ctaccgcgct gtcgcttcca gtcaggcgca
     1861 gacgcgagat gagctcagcg tctcggcttc ccggacctgt acttatcggc ccatcagttc
     1921 cgggcgatat tcgaaatgca tggtgtcgta gtggtgccaa tagccgcccc agataaaacc
     1981 gtgcttctca aaaatccgca caatccgtat cgggatttgg ttccgccaca cgggttgttg
     2041 atcgcccgtg gcccaccgcc aataattcgc ataccggatg ttgatatcga ctgcagcacc
     2101 gaacgcatgc attgacttca ggtcagttcc ggcaatcttc cggcaattgt acgtgccggc
     2161 cagacgcttc acatatctga tcagatcacc gggcaactca tcgagttcac gcgaaacggc
     2221 ctcaagcgcg cttgcgacac cgttcacctc cgtgatcgct gcgctgccac cggcgtgctt
     2281 cggaagccag cggacttgcc gcaaattttt ggcgacttcg ttcttgttgc agtcgccgta
     2341 catggcgacg aatagtggct cgaaacgaac gcggccaggg tcgatatttc ttgctggctg
     2401 tgccggtgct cctcccagcg gatatcgagc ataaaacatg tcgtcgatat caggttcttt
     2461 caaaagctcc tcgaatgtct tgttggtccg accatccgag gttcgaaact tcaacccgct
     2521 tcctaaaatc agaaactcat tatcgtgggc gcggatcttg tccggataag cgcgcacaag
     2581 ccggtccagg gactctttga tatcttgtgg cgccgctccg tatcgctctt cggcactgcc
     2641 tgtaacacct gaaagcgcgt taatcgcgaa agccaaggac aggacgaacc gttttctctg
     2701 cactgccgaa actgtatgga ttagagcgtc cgccatgacc cagggcggac ttcagtctgt
     2761 tacggggccg gtgaggcgag cggcttgcct ttttccacta cgtatgttgc gacaactttg
     2821 ggcccactcg ggccagtctt cgcgtcgtga atagcccctg gcgggatctg gtagctctga
     2881 cccgccttga cgattttctc gggctggccc tcgacgtaaa gcacaaactc gccttccacc
     2941 atgtagccag attccggacc gggatgtgtg tgacggccaa catttacgtt aggcacgatc
     3001 tcagccattc cgataacggt ctcgcagttg gtgcccggga catcgaactt ctgcaacggc
     3061 gtacgcttta tggtcgcacc ctgttgtgtc gccgcgggga gttgctgttg ggctgctgcg
     3121 atattcactg gcgcaaacac ggcaaccacc gcgcaaatca atattcttcc gaacattcgc
     3181 cgccctccgg ctgagatggc gcgactatat tggaaccaaa atgttgcgtc gacggttcgc
     3241 agacggtcct ttcccagcgg agggttgcgg cgctaccatg gcttgttcgg gagcctgggg
     3301 gagaggcgat ggtcttagtt tcccgtgtgt cagttgtgct ttcggttgca ggggggattg
     3361 tcgcgttcgc ttttgcgccg ggcgcggcag gcgagtgggc caccaaggag gacgcggttg
     3421 cgctggtgca acaggcgacg gccctcatca agcagcgtgg gccggaaaag gcctaccctg
     3481 aaatttcaaa cagggctgga cggtttcacg atcgggatct ttacatcacc gtcctcgatt
     3541 tcaacggcaa ggtcctcgcg cacggcttga ggggggatct cgtcggcagg aacctgatta
     3601 aagccaagga tcctgacggc aaattgtata tcaaggagcg cgtcgaaacc gctcgcgagc
     3661 agtcgacttt ttggcagaac tataaatggt tgaacccggc caccaaggaa attgagccac
     3721 aggatgcgta ttgcgagcgg ctgaacgaca ccgcggtgtg tgccgccgtc tatagtttct
     3781 gatggacatg cgcggctgac gggcaggaga cggaagctga cgggtttgtt tcttgcgccg
     3841 agcccttact gacccttgat ggaaaagtcg aaaaggttct gctggtaggc gctcggctgg
     3901 gcaaagcgat tatttttggg gaacgcttcg gcccgcgccg cgcgcgcggc ggacccgatc
     3961 ttcggcaacg cggccggctt gggctgggcg gcaagcacat ctggcaatgt catgtcgggc
     4021 gcgggtgccg gcgcggacgt aagagtctgt atcgtgtcgg gacgccaggg ctttggcaga
     4081 cccgaacgct cgctggtgac gatcggcggc ggaccgggag tcagggtcgc atccgcgacg
     4141 aacagcaatg caaccagcgt caaaccgacc accgccaaaa aagtaagggc tggcattacc
     4201 acgatcccac tgcacgcgcc tcagcacctc agtaatagta ggacgggctg ccgcgatcgg
     4261 tcgagttgga ccatagacct acgtatgacc ttctggctac aggaaacgtc gtcagcacac
     4321 tggtgatgtc cggcttagtc ggttggcgga cattggattt ggcggataca ttggcttttg
     4381 gtcatgccgc ttttgggcca aacgaggcat agaccttacc gctttatccc gatttggtac
     4441 gctttggagc gagcacagcc gttgtttcat tatgaaggag tccccttgcc agtgtggact
     4501 cgcgttcgct tgtgtcgttt cgtggagtgc aatcatgatc gatcatgtgg gattttcggt
     4561 gtcggactat gcgcgctcga aggccttcta tgagaaggca ttgctgccgc ttggctactc
     4621 actgatcatg gaggtgaccg cgcaggcaac cggaatgccg gccgccggtt tcggcagtga
     4681 tggcaagccc gatttttgga tcggtggcga gggaatggtg gacaagcctt tgcgcattgc
     4741 gatcgctgcg aaagaccggg cctcggttga cgcgttctac cgcgcggcgc tggcggcagg
     4801 cggcaaggat aatggtcctc ccggcgtgcg gtcgcagtat cacccgaatt attacggcgt
     4861 gtttgacccc gatggacaca acatcgaggc ggtctg
//
LOCUS       DATDHO010000812         2062 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_86053, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000812 DATDHO010000000
VERSION     DATDHO010000812.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86053"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..334
                     /locus_tag="VIY07_15835"
     CDS             <1..334
                     /locus_tag="VIY07_15835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pilus assembly protein N-terminal
                     domain-containing protein"
                     /protein_id="HEY6383261.1"
                     /translation="ATIVIGNPLIADATLQSGGILVVTGKGYGTTNLLALDRAGRVLL
                     SRSVQVLGAGTEDVVTVYKGVERESYSCAPNCERRITLGDSPGYFNATLAESGARSGQ
                     AQTTAPAR"
     gene            473..1042
                     /locus_tag="VIY07_15840"
     CDS             473..1042
                     /locus_tag="VIY07_15840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEY6383262.1"
                     /translation="MPESKRSKITAGFCRLLPSRLMRRFVRQQDGSAAVEFGFVALPF
                     LGLTFAILETALVFFAGQTLEPAVQDSARLIMTGQAQTGGWSKDDFKTAVCARVYGLF
                     DCGGKMYVDVKTYANFAAISNDPPVTDGQFDTTKMNYSPGGVGDIEVVKLYYEWPIYV
                     SLLGNHLSTLNGNKRLLVATAVFRNEPYQ"
     gene            1054..1287
                     /locus_tag="VIY07_15845"
     CDS             1054..1287
                     /locus_tag="VIY07_15845"
                     /inference="COORDINATES: protein motif:HMM:NF019428.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TadE/TadG family type IV pilus assembly protein"
                     /protein_id="HEY6383263.1"
                     /translation="MTATTPGLLRHFGRDKRGASAIEFALLAPLMIGLYIGCVEISEG
                     IAAYRKVTLTAGALANLTAQVTTISPADKDNII"
     gene            1287..1619
                     /locus_tag="VIY07_15850"
     CDS             1287..1619
                     /locus_tag="VIY07_15850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383264.1"
                     /translation="MAAATAIISPYTGTTSVKLSCLKIDDAGIAKVKWGVASASVTPR
                     AKGDIVTIPVNLAVPNSSLIFSEVSYQYIPVTGFSHISATGKTLSDEMYMSPRITPPV
                     YDTTEACN"
     gene            complement(1626..>2062)
                     /locus_tag="VIY07_15855"
     CDS             complement(1626..>2062)
                     /locus_tag="VIY07_15855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEY6383265.1"
                     /translation="VVQQDASLSVAEIGQRVGLSSTPCWKRLQRLEADAVITRRVAIV
                     DPEKVGLGITVFVSIETGDHSQEWLRKFADLVGAMPEVMEFYRMAGDVDYMLRVVVTD
                     IAGYDAFYKKLIATVPLKNVTSRFAMERIKSTTALPIAEARP"
BASE COUNT          434 a          596 c          591 g          441 t
ORIGIN      
        1 cgccacaatc gtcatcggaa accccctgat tgccgacgcc acattgcaga gtggaggcat
       61 tctcgtcgtg accggcaaag gttacggcac gaccaatctg ctggcgcttg atcgggcggg
      121 gcgcgttctc ctgagcaggt cggtgcaggt gcttggcgcg gggaccgagg acgtggttac
      181 ggtctataag ggcgtcgaac gcgagtccta tagttgtgcc cccaattgcg agcgtcggat
      241 cacgcttggc gattcgccgg gatacttcaa cgccaccctg gcagagagcg gcgcgcgcag
      301 tggacaggca caaaccactg cgccagcgcg gtagatccct tcccgcagtc cggatgtggt
      361 taatgatcgc ttaacgcgat cggggctgtg cttaggattt tagcaagaat taaaaaacgc
      421 ggtcttgcta tgaatttcgg cgtttccacg ctcagcaatc gagacgcctg tcatgccaga
      481 atccaagcgc agcaagatta cagcaggttt ttgtcggctg ttgccatctc gtctcatgcg
      541 gcgcttcgtg cgccagcaag acggttcggc ggccgttgaa ttcgggttcg tcgctcttcc
      601 gtttctggga ctgaccttcg caattctgga aacagcactg gtctttttcg ccggccagac
      661 gctcgaaccc gcggtgcaag attcagcgcg cctcatcatg acgggccagg cgcaaactgg
      721 cggctggagc aaggatgact tcaaaactgc agtctgcgcg cgcgtttatg gattgtttga
      781 ttgcggcggc aagatgtatg tcgacgtaaa gacctatgcc aacttcgcgg caatcagcaa
      841 cgaccccccg gtgaccgacg gacagtttga tacgacgaag atgaactata gcccgggtgg
      901 cgttggcgat atcgaggtgg tcaagcttta ttatgaatgg ccgatttacg tttctctgct
      961 gggcaatcac ctgtccactc tgaacggcaa caaacgcttg ctcgtggcga cagctgtttt
     1021 tcgtaacgag ccttatcaat gaggcgagtg gtcatgacag caacgacacc tggcctgttg
     1081 cgccatttcg gccgcgacaa gcgcggcgct tcggcgatcg aatttgccct cttggcgccg
     1141 ctgatgatcg gcctctatat cggctgcgtt gagatttctg aaggcatagc cgcgtaccgc
     1201 aaggtcacgc tgaccgcggg agcgctggct aacctgacgg cacaggtcac gacaatcagc
     1261 ccagccgaca aggacaacat aatataatgg ccgccgcaac ggcgatcata tcgccctata
     1321 cgggaacgac ctccgtcaag ttgtcctgtc tcaagattga cgatgcgggc attgcaaaag
     1381 tgaagtgggg tgtcgcgtcg gccagcgtca cgccgcgcgc caagggtgac atcgtcacta
     1441 ttcccgtgaa cctggcagtt ccgaactcgt cgctgatttt cagcgaagta agctatcagt
     1501 acattccggt gaccggcttc agccacattt ccgccacggg caaaacgctc tcggacgaga
     1561 tgtacatgag tccgcgtatc acgccgccgg tctacgacac gaccgaagcc tgcaactgac
     1621 gcgtttcacg gtcgggcttc tgcgattggc agcgccgttg tcgatttgat gcgctccatc
     1681 gcgaatcgcg atgtgacgtt tttcaacggc accgtcgcaa tcaacttttt gtagaacgca
     1741 tcgtatcctg caatgtcggt cacgacgacg cgcagcatgt agtccacgtc gccggccatg
     1801 cggtaaaatt ccatcacttc cggcatcgcg cccacgagat cggcaaattt tctcagccat
     1861 tcctgcgaat gatcgccggt ctcgatggaa acgaaaacgg tgatgccaag accgaccttt
     1921 tcgggatcga caatcgctac ccggcgcgtg atcacggcgt cggcctcaag ccgctgtagc
     1981 cgtttccagc aaggggtcga cgacaatccg acgcgttggc caatctcggc taccgacagg
     2041 gaagcgtcct gttgcacaac gg
//
LOCUS       DATDHO010000813         3135 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_237947, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000813 DATDHO010000000
VERSION     DATDHO010000813.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3135)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3135)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3135
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_237947"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(110..514)
                     /locus_tag="VIY07_15860"
                     /pseudo
     CDS             complement(110..514)
                     /locus_tag="VIY07_15860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494648.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="division plane positioning ATPase MipZ"
     gene            668..1519
                     /gene="panC"
                     /locus_tag="VIY07_15865"
     CDS             668..1519
                     /gene="panC"
                     /locus_tag="VIY07_15865"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEY6383266.1"
                     /translation="MSNRLKVIRTVASLRRALEPYRRRRDHIALVPTMGALHRGHMAL
                     VQEAQRRAKHVVVSIFVNPTQFAPHEDFDSYPRRFATDIKALREAKIGLVWAPSVEAM
                     YPDGFATRIAPEGPAKAGLEDEFRPHFFGGVATVVAKLFTQVSPDLAFFGQKDYQQLR
                     VVTQMAKDLDLPVKVIGVPTVREPDGLALSSRNAYLSGAERTVAPMLYRVLKGCATRI
                     KNGETADRVLKVARIEIDVAGFMLDYLEARHALTLAPISSPKDGPMRLLVAAKLGKTR
                     LIDNIAV"
     gene            complement(1516..1953)
                     /locus_tag="VIY07_15870"
     CDS             complement(1516..1953)
                     /locus_tag="VIY07_15870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1489 family protein"
                     /protein_id="HEY6383267.1"
                     /translation="MPLHLVKLCVGCDSVSDLEDWISQKLKEKKRRGQKPEHVHTTRM
                     VPKRAAELTSGGSLYWVIRGRITCRERIVDIRPFTDKDGIGRCRVVLDGRIVLVEPRP
                     RAAFQGWRYLEVKDAPRDLSRAAPGASRMPETMRRELQELGLL"
     gene            complement(1965..>3135)
                     /locus_tag="VIY07_15875"
     CDS             complement(1965..>3135)
                     /locus_tag="VIY07_15875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEY6383268.1"
                     /translation="ATGYVGAGTVEFIFDATNGLKAGNFWFMEMNTRLQVEHPVTEAV
                     TGIDLVEWQFRIAAGEQLPLAQHQVKLDGHAVEARLYAEDPERGFLPSTGRLIALQLP
                     KADGLRVDTGVEAGSDVTPFYDPMIAKLIAHGTTRDEALDRLSEALDHTIVVGPRNNA
                     GFLAALCRAADFRKGYFDTGFIDRNAKELGAVPQAIDRAATALGVQYLLAQQQPRALT
                     NEADQLASPWDETDAFQLSGERKLQLPVLVEGEGMVAEVGYSARGQTISIDGTAPARD
                     GFVVSDQDAVYVLRLGRQTKVALRDLTLDEAGDQDKSGLVRAPMHGKVLGVLVEIGAR
                     VTRGQRVAIIEAMKMEHTLLAPLDGIVADIAVGQDAQIAEGAKIMRIEPTQPAKE"
BASE COUNT          629 a          953 c          892 g          661 t
ORIGIN      
        1 gtccgggcgg tgcgacgttc aacctgccgc aggtctactg gaagacgatc ggcgacacgg
       61 tcgacgagtc gctcgcgcac acgtacatgt ggaacattcc gtacgagacg gccatcgaat
      121 gtgcaaggcg catcaagtaa gtgtcggagc cgggcgtatc gattacaacc acgtcatggc
      181 tgtgctcaat cgcgctgatc gccgccgaaa aattcgcaaa ctcctgcgtt tcgttcgctt
      241 ccagcgaatt gccttcggca cgcgcaatgc agtagtgcgt gggcatctca agcgaaatcc
      301 gcgcgcgctc cgcccaggcg cggcggttgt cgatgtagtg ggtaaagctc tgttggcggg
      361 aatcaaggtc gatggtcgca acgcgctgcc cggctttcag caacgcgacc gcaatgtgca
      421 aggcagttgt tgattttccc gaaccaccct tctcattgcc gaggacgact acatgcgccg
      481 attgagctgt ttcctgaatt ggctggatca acatgccgcc ccctccggcc gtcaattctc
      541 aaaagattag cggtctctag tcaagttaaa cccggcgcgc gtcgaatttg gttcaccaca
      601 ttcgtcgccc ccacgtcttg caggagttaa tcggcatttg cgacaattcg tggacaagga
      661 aaaaataatg tcaaatcgtc tgaaggtcat acgtacggtc gcttcgcttc gtcgcgctct
      721 agaaccgtat cgcagaaggc gtgaccacat cgcgctggta cctacaatgg gcgcgctgca
      781 ccgcggccac atggcgctgg tgcaggaagc gcaacggcgg gcaaaacatg ttgtcgtttc
      841 aattttcgta aacccgactc agttcgcgcc gcacgaagat ttcgacagtt atccacggag
      901 gtttgcaacc gacatcaaag ctttgcgcga ggccaagatc ggtctcgtct gggccccctc
      961 agtcgaggcc atgtatccgg acggctttgc tacgcggatt gctccagaag gccccgccaa
     1021 agccggtctc gaggatgaat tccggcccca tttctttggt ggcgtcgcaa cggtagtcgc
     1081 caaattgttc actcaagttt cgccggattt ggcatttttc ggccaaaagg actatcagca
     1141 gctccgtgtt gtcacccaga tggccaagga tctggacctc ccggttaagg tgatcggtgt
     1201 cccgacggtg cgcgagcccg acggattggc gctctcctcg cgcaacgcct acctttccgg
     1261 cgccgagcgc acggtggccc caatgcttta tcgcgtgctc aaaggctgcg cgacccgcat
     1321 aaaaaacggt gaaacagccg atcgcgtcct gaaggttgct cggatcgaga tcgatgtggc
     1381 gggatttatg ctcgattatc ttgaggcgcg gcacgcgctt acgctggcac caatttcctc
     1441 gcctaaagat ggccccatgc gattgctggt cgccgccaag ctgggcaaga cccgactgat
     1501 cgacaatatt gccgtctaga ggagccccag ttcctgcaat tcgcggcgca ttgtttccgg
     1561 catcctggaa gcgcctgggg ccgcacggga caggtcccgt ggcgcgtcct tgacctcaag
     1621 atatcgccag ccctgaaacg ccgcccgcgg gcgcggctcg accagcacga tccttccgtc
     1681 aaggacgacg cggcaacggc caatgccgtc cttgtcggta aaaggccgaa tatcgacgat
     1741 gcgctcacgg caggtgattc ggccgcgaat cacccaataa agggagccgc cgctggtaag
     1801 ctcggcggcg cgttttggga ccattcgggt cgtatgaaca tgctcgggtt tctgtccccg
     1861 ccgttttttt tctttcagtt tctggctgat ccaatcctca agatcggaga ctgaatcgca
     1921 cccaacacat agcttgacga gatgaagcgg cattccgggt ccggtcattc ttttgctggc
     1981 tgcgtcggtt caatgcgcat gattttcgca ccttcagcaa tctgagcatc ctgcccgacg
     2041 gctatgtccg caacgatgcc atctaacgga gccaagagcg tgtgctccat cttcatggcc
     2101 tcgataatgg cgacacgttg gccgcgcgtg acccgcgcgc caatttccac caggacacca
     2161 agtaccttgc catgcatcgg ggcccgtaca agcccgcttt tatcctgatc cccagcctca
     2221 tcgagcgtaa ggtcgcgcaa agccaccttg gtctgacgtc caaggcgcag gacatagact
     2281 gcgtcctgat cgcttacgac aaaaccatcg cgggcaggcg cggtgccatc aatggagatg
     2341 gtttggcccc gcgcgctata tcccacttcc gcgaccatcc cctcgccttc cacaaggacc
     2401 ggcagctgca gctttcgttc gcctgatagc tgaaaggcat cggtttcgtc ccaaggggat
     2461 gccagctggt cagcttcatt tgtcagcgcc cggggctgct gctgggccag caagtattgc
     2521 acgccaagcg cagtcgcagc tcggtcaatg gcctgtggca cggcgccaag ttcctttgca
     2581 ttgcggtcaa tgaagccggt gtcgaaatat cctttgcgga aatcggcggc acggcaaagg
     2641 gctgccaaaa agccggcatt gttgcgaggg ccgaccacaa tcgtgtggtc gagtgcttca
     2701 gacagacgat caagggcctc gtcgcgcgtt gttccgtgtg cgattaactt ggcgatcatc
     2761 gggtcataga acggcgtgac gtcgctgccc gcttcgacgc cagtatcgac gcgcaggccg
     2821 tcagctttag gaagctgcag cgcaatcaga cggccggttg agggcaggaa gccccgttcc
     2881 ggatcctcgg catagagacg cgcctccacg gcatgcccat cgagtttcac ctggtgctgg
     2941 gcaagcggca gttgctcgcc cgcggcgatc cggaattgcc attccaccag atcaatcccc
     3001 gtgacagctt cggtcacggg gtgctccacc tgaagccggg tgttcatttc catgaaccag
     3061 aagttgcccg ccttgagtcc gttggtggca tcgaaaataa attccactgt tcccgcgcca
     3121 acgtaacccg ttgcg
//
LOCUS       DATDHO010000814         3606 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_437086, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000814 DATDHO010000000
VERSION     DATDHO010000814.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3606)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3606)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3606
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437086"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..381
                     /locus_tag="VIY07_15880"
     CDS             <1..381
                     /locus_tag="VIY07_15880"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEY6383269.1"
                     /translation="KSYNDRFGHAAGDKMLKRIVLDIMAAARMSDLTYRFGGDEFVVI
                     ADGINAEDALSLGERIRRRIADSHGGSADGLTVSVGIASCSRDASDYDTLFEIADKRL
                     YEAKAAGRNRVVGPEKSVRLIQAR"
     gene            457..1167
                     /locus_tag="VIY07_15885"
     CDS             457..1167
                     /locus_tag="VIY07_15885"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEY6383270.1"
                     /translation="MRYELFYWPEIQGRGEFVRLALEDAGASYGDMARKPGGMNRMMA
                     MMNGVRDKRPPFAPPFLKAGKLVIAQVANILFFLGPRLKLAPRDEAGRLWLHQLQLTV
                     ADFVKEIHDTHHPVGSGLYYEDQKPEARRYAENFLDERVPKYLGYFETVLKKSGGPFL
                     LARKTTYIDLSIFQLIEGLRYAFPRAMKDIERKVPGLVEVRDKVAARPRIKAYLASPR
                     RIAFNEMGIFRHYPELDR"
     gene            complement(1186..1662)
                     /locus_tag="VIY07_15890"
     CDS             complement(1186..1662)
                     /locus_tag="VIY07_15890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEY6383271.1"
                     /translation="MSLSIRRVVTGHDGQGRATVLIDETVKNVAAQRPGALYSVIWST
                     EGFPVSNDGDADPSGKKIGTTIPEGTVFRIVSFGPGVAPRNHRTDSIDYAVVMSGEID
                     MDLDGTIVHLKAGDVLVQRGTIHNWINKGTVPCVIAFTLVSAKSVTADGKTLPALG"
     gene            complement(1684..2160)
                     /locus_tag="VIY07_15895"
     CDS             complement(1684..2160)
                     /locus_tag="VIY07_15895"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016279 - protein-lysine
                     N-methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein"
                     /protein_id="HEY6383272.1"
                     /translation="MPRRSFRIGRSFTGFGLFAIRSIKKREKIAEYKGPRVDADEAVR
                     LERRGNRYLYEINPRVTIDGSPRSNIARYANHSCNPNAESYTYGGRVFIRALRNIKPE
                     EEITYDYGNDYLKYVIGRSSCKCARCRRRRARRQREARALTKRRARLTRKRKVGLR"
     gene            complement(2607..3125)
                     /locus_tag="VIY07_15900"
     CDS             complement(2607..3125)
                     /locus_tag="VIY07_15900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383273.1"
                     /translation="MTTFADKDTAPSHRWLRLFLVLVAALEFLDALSGVQNIFTDYHH
                     ETTMLRFAQALTSINLALAPLLAGAALIFAALGNIRYAVLALAAMTLATWVLDSLPSI
                     ALRGVTLGLDFGTLAELFLYVIAPVAAVAAALLALNYKRLTLATLLAGLPALAKWLGF
                     VAFFIAIMIYGF"
     gene            3220..>3606
                     /locus_tag="VIY07_15905"
     CDS             3220..>3606
                     /locus_tag="VIY07_15905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5996 family protein"
                     /protein_id="HEY6383274.1"
                     /translation="MEARTTERWPALPYAAWKETRDTLHLWTQVVGKVRLALTPWLNH
                     SWHVALYVTARGLTTSPIPWRGGSFQIDFDFIDHVLWVRTSEGHFRQLMLRSVSVAEF
                     YEDLMIALRELDIEPNIMTMPCEIADC"
BASE COUNT          783 a         1035 c         1073 g          715 t
ORIGIN      
        1 aaatcataca acgaccgttt cggccatgcc gccggcgata aaatgctcaa gcgcattgtg
       61 ctcgacatca tggctgcggc gcgcatgtcc gatctcacct accgtttcgg cggcgacgaa
      121 tttgttgtga ttgcggacgg catcaatgcg gaagacgccc tatcgctcgg cgagcgcatc
      181 cggcgtcgga ttgccgattc acatgggggc agtgccgatg gtctgaccgt cagcgtcggc
      241 attgcgagtt gttcacgcga tgcatccgat tacgacacgc tttttgagat cgcggacaag
      301 cgtctctacg aagctaaagc ggcaggccgt aaccgcgtgg tcggtcccga aaagtccgta
      361 cgcctgattc aggcccgcta gacccggccc cttgaagtca gcccgcaacg cgggcgaagc
      421 tgacgcaaaa cccctcaaac ttgccgggtg actgccatgc gttatgagct cttttactgg
      481 ccggagatcc agggccgcgg cgaatttgtg cggcttgcgc tcgaagatgc gggcgcgagc
      541 tacggagaca tggcgcgcaa accgggcggc atgaaccgca tgatggcgat gatgaacggc
      601 gtgcgcgaca agcgcccgcc atttgccccg ccgttcctca aggcaggcaa gctggtcatc
      661 gcgcaagtcg ccaatatcct gttttttctc ggcccgcggc tgaagcttgc tccccgcgac
      721 gaggcaggtc gtctgtggct gcatcagttg cagctcaccg tggccgactt cgtgaaggaa
      781 atccacgata cccatcatcc ggtcggttca ggcctctact atgaagatca gaagccggaa
      841 gccaggcgat acgccgagaa ttttctcgac gaacgggtgc cgaaatatct gggctacttt
      901 gaaacggtgc tgaaaaagag cggcggacct tttttgctcg cccgcaagac gacctacatc
      961 gatctttcga tttttcagct gatcgaaggg ctacgttatg cgtttccgcg cgcgatgaag
     1021 gacatcgaaa gaaaagttcc gggtcttgtc gaggtgcgtg acaaggttgc ggcgagaccg
     1081 cgcatcaagg cttatcttgc atcgcctcgc cgcatcgctt tcaacgagat gggaatattc
     1141 cggcactacc cggagcttga ccgctagggc ggcgagcggg aggcgctacc ccagcgccgg
     1201 cagcgtcttt ccatccgcgg tgaccgactt tgccgatacg agcgtaaagg caatcacgca
     1261 aggcacggtg cctttattga tccagttgtg aattgttcca cgctgcacca gcacatcgcc
     1321 ggctttcagg tggacgatcg tgccgtcaag atccatgtcg atttcacccg acatcaccac
     1381 cgcgtaatcg atcgagtcgg tgcgatgatt acgcggcgcg acgcctggtc cgaagctgac
     1441 gatgcggaaa acggtccctt cgggaatcgt ggtgcctatt ttcttgcccg aaggatcagc
     1501 gtccccgtca ttgctgaccg ggaagccctc ggtcgaccag atgacgctgt agagggcacc
     1561 cggacgctgc gccgcgacat tcttgaccgt ctcgtcgatc agtaccgtag cgcgcccctg
     1621 accgtcatga ccggtcacaa cacggcggat gctcaggctc atgggctttc ctcctttatg
     1681 caattagcgc aggccgacct tgcgtttgcg tgtcagtcgc gcccggcgtt tcgtcagggc
     1741 gcgcgcttcc cgttgtctgc gcgcccggcg tcgccggcag cgcgcgcatt tgcagctgga
     1801 gcgtccgatt acgtacttga ggtaatcgtt gccgtaatca tacgtaattt cctcttcggg
     1861 cttgatgttg cgcagcgccc ggatgaacac gcgacctcca tatgtgtagg actccgcgtt
     1921 tggattgcac gaatggttgg cgtagcgcgc gatattgctt cgtggacttc catcaatggt
     1981 gacgcgggga ttgatttcgt agaggtaccg gttgccccga cgttcgagac ggacggcttc
     2041 gtccgcgtca acgcgcgggc ctttgtattc ggcgattttt tcacgttttt tgatcgaccg
     2101 aatggcaaag aggccgaagc ctgtgaaaga acggccgata cggaatgatc ttcggggcat
     2161 tgcgggaacg aacggacaaa ggagagagga atgttgcgga tggcagatca accgccgcag
     2221 gtcaattgcc cgctcttcct taacgaaggc aatgcttgaa ctgtcctatg aaaataggac
     2281 aacccgattg cagacacctt cggcaaagga ctgcgtccta gtgcaggagc cggccagccc
     2341 agccgaggaa agaagagaat tggtccggat agacgacaaa ataaagaacg agcgctaccg
     2401 gggccaacat gaacatcaag tctcgcatgg ggcattcccc gcgctgacat gttgagtccg
     2461 aacacacttt tttatcgcaa cgactccccg tccggcgtca ataacgccag tatcaacaaa
     2521 atctgctgac cacagaaaat cgaattgtag ataactggaa ccgctccccg tccaactggt
     2581 aattagatgc cagtctgatg cacggcttag aagccgtaga tcatgatcgc gatgaagaac
     2641 gcgacgaaac ccaaccattt ggccagcgcc ggcaggccgg ccagcagggt ggccagggtg
     2701 agccgcttgt agttcagcgc cagcagtgcc gccgccaccg cggccacggg agcgatgacg
     2761 taaagaaaaa gctccgcgag agtgccaaag tcgagcccga gcgtgacgcc gcggagagcg
     2821 attgagggca agctatcaag cacccaagtg gccaacgtca tcgcagccaa tgccaggacg
     2881 gcatagcgga tgttgcctaa tgcggcgaag atcagtgcgg cccccgcgag caatggcgcc
     2941 agcgcaaggt tgatgcttgt cagcgcctgc gcaaaacgca gcatcgttgt ttcgtgatga
     3001 taatcggtaa agatattctg cacgccggaa agcgcgtcga gaaattcgag cgcagcgaca
     3061 agaacaagaa acaggcgcag ccagcgatgt gacggcgcgg tgtccttgtc cgcaaacgtg
     3121 gtcatcaagc cccccggtcc ggcgcgacta tacgcccaac catggctgcc gtccgcagca
     3181 tgctggtata aggtccggcg ataggagaaa acgatcggca tggaggctcg aacaactgag
     3241 cgctggcctg cgctgccgta tgcggcgtgg aaagaaacac gggatacgct gcacttgtgg
     3301 acgcaggttg tcggcaaggt caggctcgcc ctgacacctt ggctcaatca ctcctggcat
     3361 gtggcgcttt atgtgaccgc gcgggggttg acgacgtccc caattccgtg gcgcggcggc
     3421 agctttcaaa tcgatttcga tttcatcgac cacgtgctgt gggtgaggac gagcgaggga
     3481 catttccgtc aactgatgct caggtccgtg agtgtcgccg aattctacga agacctgatg
     3541 atcgcgctgc gcgagctcga catagaacca aacatcatga ccatgccgtg cgagatcgcc
     3601 gactgc
//
LOCUS       DATDHO010000815         1990 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_437124, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000815 DATDHO010000000
VERSION     DATDHO010000815.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437124"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..886
                     /locus_tag="VIY07_15910"
     CDS             <1..886
                     /locus_tag="VIY07_15910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006469031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEY6383275.1"
                     /translation="DGRRIRKGSADAIVEYVHELGGTVSSQVEGVTHGISDSGGTPLV
                     VAEGNKVLGIIHLKDVVKGGISERFERFRAMGIRTVMITGDNPRTAAAIAREAGVDDF
                     LAQATPEAKMRLIREEQAKGKLVAMTGDGTNDAPALAQADVGVAMNTGTQAAKEAGNM
                     VDLDSNPTKLLEVVEIGKQMLMTRGVLTTFSIANDVAKYFAIIPAMFMGVYPEIAPLN
                     IMHLASPQSAILSAVIFNAIIIILLIPLALRGVQYRPIGAGPLLARSLLIYGVGGVIA
                     PFIGIKLIDVVLEAVGLV"
     gene            896..1513
                     /gene="kdpC"
                     /locus_tag="VIY07_15915"
     CDS             896..1513
                     /gene="kdpC"
                     /locus_tag="VIY07_15915"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF001454.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpC"
                     /protein_id="HEY6383276.1"
                     /translation="MKNVFGVAVRTTIVTLVLTGLIYPFVMTGLAQILFPWRANGSLV
                     TDETGQVVGSELIAQGFTNPAYFQPRPSAAGENGYDATSSSGSNLGPTSKKLQDRIND
                     DLKRLTAENPEATGPVPAELVTASASGLDPHLSPEAVRWQVPRVAKARGIAVERVKAV
                     VDSNVEGRTFGILGEPRVNVLLVNLALDRQFGRPAPLPIQQRKDG"
     gene            1521..>1990
                     /locus_tag="VIY07_15920"
     CDS             1521..>1990
                     /locus_tag="VIY07_15920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HEY6383277.1"
                     /translation="MAVERKRPEDFLELVERAKRGRLKVYIGSAAGVGKTYQMLEEAH
                     ALKKRGVDVVLAFIEPHDRLDTEALIEGLEVIPRQWVEYKGVAIEEMDLDAVLKRRPQ
                     VAVVDELAHTNAPFCRNKKRYQDIIELLDAGINVICAFNVQHLESLNDLVKQATG"
BASE COUNT          434 a          517 c          614 g          425 t
ORIGIN      
        1 cgacgggcgc aggattcgca aaggatcggc cgacgccatc gtagagtacg ttcacgagct
       61 gggcggcacg gtcagctcac aggtcgaagg tgtcacccac gggatctccg attccggcgg
      121 aaccccgctg gtggtcgccg agggaaataa ggttctcggt attattcatc ttaaggatgt
      181 cgtcaagggc ggtattagcg agcgcttcga gcgtttccgg gctatgggta ttcgcacagt
      241 gatgattacc ggagacaatc cgcgcactgc ggcggcgatc gctagggaag cgggtgtcga
      301 tgatttcctc gcgcaagcga caccggaagc gaagatgcgg ctcattagag aagagcaagc
      361 gaagggcaag ctcgtggcga tgaccgggga tggcaccaac gatgccccgg cactggcaca
      421 ggcagatgtc ggtgtggcga tgaataccgg gacgcaggcg gctaaagaag ccggcaacat
      481 ggttgacctg gattccaatc cgaccaaact tttggaagtg gtggagattg gcaaacagat
      541 gttaatgacc cgcggcgtgc tcacaacttt ttcaatcgcc aacgacgtgg cgaagtattt
      601 cgcgattatt ccagccatgt tcatgggtgt ttaccccgag attgcgccgc tcaacatcat
      661 gcatttggcg tcaccgcaaa gcgcgattct ctcggcggtg atcttcaacg cgatcattat
      721 cattctcctt atcccgttgg cacttcgcgg cgtgcagtat cggccgatcg gcgccggccc
      781 gttgctggct cgttctctgc tcatttacgg cgtgggaggg gtgatcgcgc cttttattgg
      841 gattaaactg atcgatgtgg tcttggaagc tgtagggctc gtttaggaga cgattatgaa
      901 aaacgtattt ggtgttgcgg taagaaccac gattgtcacc cttgttctaa cgggactgat
      961 ctatcctttt gtaatgaccg gcctcgctca aatcttattt ccatggagag cgaacggcag
     1021 cctggtgacg gacgagacgg gacaagtcgt tggctcggag ctcatcgcac agggatttac
     1081 aaaccctgcc tactttcagc ctcggccgtc ggcggcggga gagaatggct atgatgcgac
     1141 ttcgtcgtcc ggttccaatc ttggtccgac gtcgaagaaa ctgcaggatc ggatcaacga
     1201 cgatctcaag cgcctaacgg cagaaaaccc tgaagccacc ggacccgttc ccgctgaact
     1261 tgtcactgcg tctgcgagcg gactcgatcc acatctctcg ccggaagccg tgcggtggca
     1321 ggtaccgcga gttgcaaaag cgcgtggcat cgctgtggag cgagtaaagg ccgtcgtaga
     1381 ttcgaatgtg gaagggagaa ctttcggcat cttgggcgaa ccccgagtca atgtgctgct
     1441 ggttaacctg gcgctcgatc gacagttcgg tcggccggct ccgttgccca ttcaacaaag
     1501 gaaagatggc tgacgctacc atggccgtgg agcgtaaacg acccgaagat ttccttgagc
     1561 tggtcgagcg cgcgaaacgc ggccggctga aggtctatat tggctctgcg gccggcgttg
     1621 gcaaaaccta ccagatgctg gaggaggcac acgcgctgaa gaaacgcggg gttgatgtcg
     1681 tcttagcgtt tatcgaaccg cacgatcggc tcgataccga ggcgctgatc gaggggctcg
     1741 aggtgattcc gcggcaatgg gtcgaatata agggcgtggc gatcgaggag atggacctcg
     1801 atgcggttct caagaggcgc ccccaggtgg ccgttgtcga tgaactggcg cataccaatg
     1861 cgcctttttg ccgtaataaa aagcgctacc aggacattat cgaattgttg gacgccggca
     1921 tcaacgtcat ctgcgcgttc aacgtgcagc atctggaaag cctcaatgat ctggtcaagc
     1981 aagcgactgg
//
LOCUS       DATDHO010000816         2378 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_39180, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000816 DATDHO010000000
VERSION     DATDHO010000816.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_39180"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            281..1054
                     /locus_tag="VIY07_15925"
     CDS             281..1054
                     /locus_tag="VIY07_15925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HEY6383278.1"
                     /translation="MKRRLGIQSFIIVATAVSAVSTSFAREMLPPGFVYLRDVDPSIQ
                     QDIRYATSDNFTGRPLPGYGAAECILRREAAEALKRVQADLSRESLSLKVYDCYRPTR
                     AVRGMAAWAHDADDNENTRRFYPAVHKRNLFALGYISAQSRHSTGTAVDLTLVKMPAA
                     AADRFEPTARYGACNGPAAKRAPDNSVDMGTSFDCFDIRSYTMSGAITAEQRRWRAAL
                     NAAMHRHGFANYFREWWHYSFYGAAEPRAYDFAITPRGR"
     gene            complement(1062..1550)
                     /locus_tag="VIY07_15930"
     CDS             complement(1062..1550)
                     /locus_tag="VIY07_15930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HEY6383279.1"
                     /translation="MPDADTPFWRRKLMSEMTRAEWESLCDGCGRCCLNKLIDEDTND
                     TLFTNVSCKLLDCGACRCRDYPHRHVKVRDCVRLTPRNVRRLRWLPPTCAYRLVAEGK
                     DLAWWHPLVSGDPETVHRAGISVRGRVAASEVDVPDEKLADYIVSWPGKWPKRAKRKA
                     AR"
     gene            1861..>2378
                     /locus_tag="VIY07_15935"
     CDS             1861..>2378
                     /locus_tag="VIY07_15935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HEY6383280.1"
                     /translation="MRDLFPEDWKPSIKRFLLGLDAWVDFSVFRSASGLRESYERFST
                     FMDRFHVSGWRRGLNELVSEGATLGTVGLVVMLALAVPAFRETSDDDWLKKSELAVTF
                     LDRYGNEVGSRGIKHNDAIPLDQFPDHLVKAVLSTEDRRFYEHFGIDLPGTARALVAN
                     TRAGGVVQGGSS"
BASE COUNT          455 a          720 c          709 g          494 t
ORIGIN      
        1 agtgccccca ggaacattgc gagcatgatg ccaagcacaa tggttctgat ttccggatgg
       61 ctcagcgcgt gcggctcagg cggggcttcg gccttggtgg gccgagcctt agacttcggc
      121 ttgggggatg tcatcgcgcg atcgtgcaaa ctcatggccg accaccgctc aatgccctgc
      181 ccgttccggc aaagcaagac gcccccgcgc gggggtgcta tgtgcaatag tcgggcgcgt
      241 ttcactgatt ctgctgccag caactcactt tgagatggcg atgaaacgtc gcttgggcat
      301 acaaagcttc atcatcgtcg caacagccgt ttcggcggtc tcaacctctt tcgcgcgaga
      361 gatgttgccg ccgggttttg tttatttgcg cgatgtggat cccagcatcc agcaggatat
      421 ccgatacgca acgagcgata acttcaccgg ccgccccctc cctggctatg gcgccgccga
      481 atgcatcttg cgccgagagg cggctgaggc gcttaagcgc gtgcaagccg atctctcgcg
      541 cgaaagtctg agtttgaagg tttacgactg ctaccgaccg acgcgcgccg tacgcggaat
      601 ggcagcctgg gctcatgatg ccgacgacaa cgagaatacg cgccgcttct atccggcagt
      661 gcacaagcgg aatttgttcg cgctcggata catctctgcg cagtcgcgac attctaccgg
      721 aactgctgtt gatctcacgc tggtgaaaat gccggccgca gccgcggacc gcttcgaacc
      781 gacggcccgc tatggggctt gcaatggacc ggcagccaag cgtgcgcctg acaacagcgt
      841 cgatatggga accagcttcg attgcttcga catcaggagc tatactatga gcggcgcgat
      901 caccgccgaa cagcgacgtt ggcgggccgc attgaatgcc gcgatgcatc ggcacggctt
      961 tgccaactat ttccgcgaat ggtggcacta ttctttttat ggcgcggccg aacctcgcgc
     1021 ctatgatttc gcgataacgc cgcgcgggcg atgaagctac gttaccttgc agcctttcgc
     1081 ttggcccgct tcggccactt acccggccag cttacaatgt agtcggcaag cttctcgtcc
     1141 ggcacatcca cctcgctcgc cgcgacacgg ccgcgtacag agatgcccgc tcgatggacg
     1201 gtttcaggat cgccggagac cagcggatgc caccatgcga ggtccttgcc ttcagccacc
     1261 aggcggtagg cgcaggttgg cggtagccac ctgagccgcc ggacattgcg cggcgtgagc
     1321 ctcacgcaat ccctcacctt gacgtggcga tggggatagt cccggcagcg gcaggctcca
     1381 cagtcgagca gcttgcaact cacgttggtg aacagggtat cgttcgtatc ctcatcaatc
     1441 agtttgttca ggcaacagcg gccgcaaccg tcgcataggc tttcccactc tgcgcgcgtc
     1501 atttcggaca tgagcttgcg gcgccagaaa ggggtgtccg catcaggcat attgggaatc
     1561 cttggacgaa ccttgtagcc gtccggctgg gggttcgtca tgtttcttca acctctccta
     1621 caacgagagg ttcttcaact tctgccacag aaagaggtcc aaaaaagggg ccggccggga
     1681 aaaagcgcgt cctgcggagc caaaggagct cgggaaaggt ccaccctggg ccatttttaa
     1741 ccgcaatttt cattcacctt ggccacagcc gggggaaccg cagcattggc tgtgggttgg
     1801 ccgatcggct agaatccatg tatccggtct tcccggactc attccacgag cggcaaaacc
     1861 ttgcgcgacc tatttcccga ggactggaag cccagcatca aacgattcct gctcgggctg
     1921 gacgcatggg tggacttcag cgtgtttcgc agcgcctcgg gcctgcgtga aagttatgag
     1981 cggttttcca ccttcatgga ccgtttccac gtgtccggtt ggcggcgcgg gctcaatgag
     2041 ctggtatctg agggggcaac cctcggcact gtcggactcg tggtgatgct ggcactggcg
     2101 gtgcctgcgt tccgcgagac gtccgacgac gactggttga agaaatccga gctggcagtg
     2161 actttccttg accggtacgg caacgaggtc ggctcgcgcg gcattaaaca taatgacgcg
     2221 ataccgctcg accagtttcc cgatcatttg gtcaaggccg tgctctctac agaggaccgg
     2281 cgcttttacg aacacttcgg catcgatctt ccgggcacgg cacgagcact ggtggccaat
     2341 acgcgcgccg gcggtgtcgt acagggcggc tcttccat
//
LOCUS       DATDHO010000817         1860 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_387564, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000817 DATDHO010000000
VERSION     DATDHO010000817.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1860
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_387564"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1860)
                     /locus_tag="VIY07_15940"
     CDS             complement(<1..>1860)
                     /locus_tag="VIY07_15940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HEY6383281.1"
                     /translation="KFDGYQFRKLNPAELAQIAGRAGRATRDGTFGTTGRCDPFELEL
                     VQALESHSFEPLRLLQWRNTDLDFASIGALQASLAAVPAEQGLTRAPIGEDILVLEHA
                     ARDEDVRSLARDRASIARLWDACQVPDYRKIAPATHAELVVALYGFLMRGGNIPTDWF
                     ARQVAHADRTDGDIDTLSNRIAHVRTWTFVANRPDWLADPEHWQGVTRAVEDKLSDAL
                     HERLAERFVDRRTSVLMRRLREKAMLETEIGKSGEVTVEGHVIGRLDGFMFAPDAAAA
                     GSEAKALNAAAQKVLAGEIEARATKISQASNDQIVLASDGALRWTGDLVAKLMPGDDT
                     LRPRVRVIADEHLTGPARELVQTRLDLWLKTHIEKLLAPLFSLTATDDVTGMARGVAF
                     QLVESLGVLERQKVAEEVKALDQPARAILRKYGVRFGAYHIYLPALLKPTPRALATQL
                     WAVKYESPEAKGVGDLLHLAASGRTSIPVDKDTPKALYRTAGYRVCGDRAVRVDILER
                     LADLIRPALSWREGSPGPKPDGFFDARSFVITGAMTSLTGASGEDFASILRSLGYRMD
                     RKPKPVEVAPPSVPAATPDASPSAAAQTVPINEAADASPEAPPTGAPDTEPAVG"
BASE COUNT          344 a          584 c          583 g          349 t
ORIGIN      
        1 tccaactgcg ggctctgtat ctggcgctcc tgtcggtggc gcttcgggtg acgcgtccgc
       61 ggcttcgttg atcggtaccg tttgcgcagc cgcgcttggc gaagcatcgg gcgtagcggc
      121 aggaacggat ggcggggcca cctcgaccgg cttgggcttg cgatccatgc gatagccgag
      181 cgagcgcaga attgaagcga aatcctcgcc tgaagcgccc gtgagagacg tcatggcgcc
      241 ggtaatcaca aagctgcgtg cgtcgaaaaa tccgtcgggc ttcggaccgg gcgaaccttc
      301 acgccaggac agcgccggcc ggatgaggtc ggcaagcctt tccagaatat cgacgcgaac
      361 cgcgcgatcg ccgcagacgc gataaccggc agttcgataa agggctttgg gcgtatcctt
      421 gtccacgggg atcgatgtgc gtccgctcgc cgcaagatgc agcaggtcgc cgacaccctt
      481 ggcttccggg ctttcgtact tgaccgccca caactgcgtt gcgagcgcgc gcggcgtcgg
      541 cttgagcagt gccggcaggt agatatggta cgcgccgaag cgcacaccgt acttgcgcag
      601 gatcgcgcgt gccggctgat cgagagcttt gacttcctcg gccactttct gccgttcgag
      661 cacgccaagc gattccacca gctgaaatgc aacaccgcgc gccatgccgg tcacgtcgtc
      721 ggtcgcggtc agcgagaaca ggggcgcgag caatttctcg atatgcgtct tcagccagag
      781 gtcgagtctg gtctggacca gctcgcgcgc cgggccggtg agatgctcgt cggcaattac
      841 gcgcactcgc ggccgcaggg tgtcatcgcc tggcatcagt ttggccacga gatccccggt
      901 ccagcgcaat gcgccgtcgc tcgccaaaac gatctgatcg ttggaagcct gcgaaatctt
      961 ggtggcacgc gcttcgattt cgccagccag aaccttttgg gctgcggcgt tgagcgcctt
     1021 ggcttccgaa cctgcggccg ctgcatcggg agcgaacatg aatccgtcga gccgaccaat
     1081 cacgtgaccc tcgaccgtga cttcgccaga ctttccgatt tcggtttcca gcatcgcctt
     1141 ttctcgaagc cgtcgcatca acacgcttgt gcgacggtcc acgaaacgct cggccaaacg
     1201 ctcgtgcagc gcatcggata gtttatcctc gacggcgcgc gtgacacctt gccagtgctc
     1261 cggatcggcg agccaatccg gccgattggc aacgaatgtc cacgtcctga catgcgcgat
     1321 ccggttggag agagtgtcaa tgtcgccatc ggttcggtcg gcatgggcaa cctgccgagc
     1381 gaaccaatcc gtggggatgt taccccctcg catcaaaaat ccatagaggg ccacgaccag
     1441 ttctgcgtgc gtcgcgggag caatttttcg atagtccgga acctggcagg catcccacag
     1501 gcgcgcgatg gaagcgcggt cgcgagcgag cgagcgtaca tcctcgtccc gcgcggcgtg
     1561 ctcgagaacc agtatgtcct cgccgatggg tgcgcgcgtc aggccctgct ctgccggcac
     1621 ggcagccagg gacgcctgca aagcgccgat cgaagcaaaa tcaagatcgg tattgcgcca
     1681 ttgcagcaag cgaagcggtt cgaagctgtg actttccagc gcctgcacaa gttcaagttc
     1741 gaacggatcg cagcgtccgg tcgtgccaaa ggtgccgtca cgggtagccc ggcccgctcg
     1801 ccccgcgatt tgagcgagtt cggccggatt gagctttcga aactgatagc cgtcgaactt
//
LOCUS       DATDHO010000818         5189 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_238030, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000818 DATDHO010000000
VERSION     DATDHO010000818.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5189
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238030"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            127..1539
                     /gene="leuC"
                     /locus_tag="VIY07_15945"
     CDS             127..1539
                     /gene="leuC"
                     /locus_tag="VIY07_15945"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008194113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEY6383282.1"
                     /translation="MTERRTLIDKLWSSHEIVRRDDGAALLLVDRHYVHEGSFHAFSQ
                     MKERRRTVAEPALTFGVADHYVPTRGRDKGIANPEIAAMVTQLEANAAESHMTLFGLR
                     DPRQGIVHVVGPEQGLTLPGLLIVCGDSHTSTHGAFGAYAFGIGASEVAHVLMTQTLW
                     QKKPKRMRIAVEGASAAGVGAKDIALAIIAEVGADGAQGHAIEFAGGAIRALSMEGRM
                     TLCNMSIEAGGRCGMVAPDETTFAYLKGRPYAPKGEAFDRAIEAWSALASDPDATFDR
                     EVTIDAVTIAPIVTWGTTPDDALPIDGYAPDPARETNPVRAKYLRDALDYMAIAPGKK
                     LTEIAIDRVFIGSCTNSRIEDLRSAAAVLAGRVSKVPGLVSPGSSTVKRQAEEEGLDR
                     IFREAGLEWADSGCSMCVGINGDVVQSGERCASTTNRNFRGRQGPGARTHLMSPAMVA
                     AAAVSGHLADVRPLLSGREV"
     gene            1543..2160
                     /gene="leuD"
                     /locus_tag="VIY07_15950"
     CDS             1543..2160
                     /gene="leuD"
                     /locus_tag="VIY07_15950"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019998972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEY6383283.1"
                     /translation="MEKFVQLTARACPLLLANLNTDQILPARYLKWPRSKGLGAVLFQ
                     DLRVDSQGKERKDFPLNQPLWQDAGILLAGRNFGGGSSREAAVYALYDHGFRCVIAPS
                     FGDIFAQNAVKNGLLTATVSEADVADMAATVSANPQLPIAIDLERKTIVCGNRIHVFE
                     IDPVSRNQLLNGWDDVDLTESYSDRIAEFSAEYRTRRPWVVLAKS"
     gene            complement(2190..3590)
                     /locus_tag="VIY07_15955"
     CDS             complement(2190..3590)
                     /locus_tag="VIY07_15955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6383284.1"
                     /translation="MSNVAFSKGEDFATKVPLLIIGAGAAGLCAALAANEAGGDVVVL
                     ERDASPTGSTGLSAGLIPAAGTKFQRVKGISDNPQMFAADIARKANGEADPAVVNAVA
                     VGAAPLVEWLAERHRLPFEVVDNFNYPGHSAMRMHGLPSRTGRELIDRLRNAVEQNEI
                     VILTHSAAELLIVNPDGRILGIEIARPDGTRERIGCDALILACSGFGGNPDLVRRYIP
                     EMGSALYFGHPGNRGHAVRWGSALGAQLAHLGAYQGHGSLATPHNILITWAVIMEGGI
                     QVNCDGRRFCDETCGYSEQAAEVLRQPGGFVWDIFDARIAGVARQFEDFREAEDAGAV
                     LGFDTVEDMAQMIHVPVANFVEEWREVEKLKLIGSRDRYGRQLRAEQSCKPPYHAVKV
                     TGALFHTQGGLAVDACGRVKRKDGTVFPNLFAAGGAAAGVSGSIARGYLSGNGLLTAT
                     VLGGLAGRAAAEQLLG"
     gene            3683..3949
                     /locus_tag="VIY07_15960"
     CDS             3683..3949
                     /locus_tag="VIY07_15960"
                     /inference="COORDINATES: protein motif:HMM:NF019590.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NIPSNAP family protein"
                     /protein_id="HEY6383285.1"
                     /translation="MARFSGQTETYKAVPARNKISPLLTAMSSVTGAVTRFTHSWPYK
                     SLEDRGRLRAKAMDEGVWPPPGGPDQLAVQQTDIYLPASFSPIR"
     gene            complement(3966..>5189)
                     /locus_tag="VIY07_15965"
     CDS             complement(3966..>5189)
                     /locus_tag="VIY07_15965"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HEY6383286.1"
                     /translation="VRANVREPLQVEGDIYACAASNDEGIRRLIEMMDEFEISNLDRL
                     GDTIVEASREATLARIRALPKGTYRNQLTMDGYEKSLVLNAALTISHEGIHVDFDGTS
                     PASGYGINVVYNYCLAYTAFGVKCLVAPDVPNNAGSLAPITVSAPEGCVLNVNRPWPV
                     AARHTVGHMLPDAVFGCLHQVMAGGVPAEGASSLWNPQIFGGGSLVDEIEKGVDANEL
                     PAFSTVIFHCGGAGARPGKDGLSATAFPSGVRTIPVEATESVAPVVFYRREFREGSGG
                     PGKFRGGLGQVIELGGAGAAPIALLCNFERVRNAARGRERGKPGANGSVKLRSGKPIR
                     PKGRQTVPARDAICLGLPGGGGFGDPRTRDPHRVLDDVLDGLITADEARRDYGVAIDG
                     QGRLDLAETDRLRSS"
BASE COUNT         1021 a         1625 c         1534 g         1009 t
ORIGIN      
        1 ctcctcattt ggcgttacgg caggtgagcg ttcaaggctg atgctattgc tcagaaccct
       61 tggacttggc gtacaatatt gcggacggcc gacaggcccg caacagctaa agcagatccg
      121 accggcatga ccgagcggcg caccctcatc gacaagttgt ggtcatcgca cgagattgtg
      181 cggcgcgacg acggggccgc tttgcttctg gttgaccgcc attacgtgca cgagggctcg
      241 ttccatgctt tcagccaaat gaaggaacgc aggcgcaccg tcgccgagcc ggccctgacc
      301 ttcggcgtcg ccgatcacta tgtcccgacg cgcggccgtg acaaaggcat cgccaatccc
      361 gagattgcgg cgatggtcac ccaactcgaa gccaatgcgg cagaaagcca catgacgctc
      421 ttcggtctgc gtgacccgcg ccagggcatc gtgcatgtcg tcggtcctga acagggattg
      481 accctgccgg gattgctgat cgtctgcggc gacagccaca cctcgaccca cggcgcattc
      541 ggcgcctatg ccttcggcat cggcgcgtcc gaggtggcgc acgtactaat gacgcaaacg
      601 ctgtggcaga agaagccaaa gcgcatgcgc attgccgtag aaggcgcttc cgccgccggc
      661 gtcggtgcga aggatattgc gcttgccatt attgcagagg tcggtgcgga tggtgcgcaa
      721 ggccatgcaa tcgaattcgc cgggggcgcc attcgtgcct tgtcgatgga agggcgcatg
      781 acgctatgca acatgtcgat cgaagcaggc ggccgctgtg gaatggtcgc gcccgacgaa
      841 acgactttcg cctatctgaa agggcgtccc tatgcgccga aaggagaggc attcgaccgc
      901 gccatcgagg catggtccgc gcttgcttcc gatcccgacg cgacgttcga ccgtgaggtg
      961 acaatcgatg cggtcaccat tgcgcctatt gtcacctggg gaacgacacc ggacgatgct
     1021 ttgccgatcg acggatatgc acccgatcct gcgcgcgaga caaatccggt gcgcgccaaa
     1081 tatttgcgtg atgcgctgga ctacatggcc atcgcgcccg gcaagaaact gaccgaaatc
     1141 gccattgatc gcgtgttcat cggctcctgc accaactcgc gcatcgaaga cttgcgctct
     1201 gccgcggcgg ttctcgccgg ccgtgtcagc aaggtgcccg gattggtatc gccgggttcc
     1261 tccacggtta aacgtcaggc agaggaagaa ggccttgacc gtatcttccg cgaggcaggg
     1321 cttgaatggg cggactcggg ctgttccatg tgcgttggga tcaacggcga cgtggtgcaa
     1381 tctggagaac gctgtgcatc gaccaccaat cgcaatttcc gcggccgtca gggaccgggt
     1441 gcacgtaccc atttgatgtc accggcgatg gtcgcggccg ccgcggtcag cggacatctt
     1501 gccgatgttc gtccactgct gagcggccgc gaggtgtagg gcgtggaaaa gttcgttcaa
     1561 cttaccgcca gggcctgccc gttgctgctg gccaacctca acaccgacca gatcctgccg
     1621 gcgcgatatc tcaagtggcc ccgctcgaaa ggtctcgggg ccgtgctttt ccaggatctg
     1681 cgcgtcgaca gtcagggcaa ggaacgaaag gacttcccgc tcaatcagcc tctttggcaa
     1741 gacgccggta ttttgctcgc aggccgcaac tttggcggcg gctcgtcgcg tgaagccgcc
     1801 gtttacgcat tgtacgacca tggatttcgt tgcgtcatcg caccatcgtt cggcgatatc
     1861 ttcgcccaga acgcggtcaa gaacggtttg ctgacggcga ccgtttccga agccgatgtc
     1921 gccgacatgg cggcaacggt ttctgcaaat ccgcagctgc cgatcgctat cgatctcgag
     1981 aggaaaacca ttgtttgcgg caacaggatc cacgtttttg aaattgatcc ggttagccgc
     2041 aaccagcttc tgaacgggtg ggatgatgtc gatctcaccg aaagctatag tgaccgaata
     2101 gccgaatttt cagctgaata ccggactcgc agaccgtggg tcgtcctggc caagtcttga
     2161 tcgtgcggtt ccgcacgtgg aaggccggct tatccgagca gctgctcggc agccgccctc
     2221 cccgccaggc cgccgaggac cgttgcagtg agcaaaccat ttcctgacag gtaaccccgt
     2281 gcaattgagc ccgatacgcc tgccgccgca ccaccggccg cgaacagatt gggaaagacc
     2341 gttccgtctt tgcgtttgac gcggccacat gcatcgactg cgagtccccc ttgggtatga
     2401 aacaaagctc cggttacctt gacggcgtgg tacggcggct tgcaagactg ttcggctcgc
     2461 aactggcgcc cataacgatc gcggctgccg atcaatttta atttttccac ttcgcgccat
     2521 tcttcgacaa agttcgcgac aggtacatgg atcatctgtg ccatgtcttc gacggtatcg
     2581 aagccaagaa ctgcgccggc atcttccgct tcgcggaaat cctcgaactg tcttgccacc
     2641 cccgctattc gtgcgtcgaa tatatcccac acaaatccgc ccggctgtct aaggacctcg
     2701 gcggcctgct cagagtagcc acaggtttcg tcacagaagc ggcggccgtc gcaattcacc
     2761 tggatgcctc cttccatgat aacggcccag gtgatcagga tgttatgcgg cgtcgccagt
     2821 gagccatggc cttgataggc gccgagatgg gccagctgcg cgccgagcgc gctgccccac
     2881 ctgacagcat ggccgcgatt tccgggatgc ccgaagtaga gtgcgctccc catttcgggg
     2941 atgtagcgac gaaccagatc gggattgcct ccaaagccgc tgcaggcgag gattaaagca
     3001 tcgcacccga tccgctcgcg cgtgccgtct ggacgggcga tctcgattcc gagaatgcgg
     3061 ccatccggat tgacgatcag cagttctgcc gcgctgtgcg taagaatgac gatttcgttc
     3121 tgttcgaccg cgttgcgcag gcggtcgatc aattcgcggc cagtacgact tggcaagcca
     3181 tgcatgcgca tggcggaatg ccccggatag ttgaagttgt cgaccacctc aaaaggcaag
     3241 cgatgacgtt ccgcaagcca ttcgaccagt ggggccgcgc cgacggcgac ggcattcacc
     3301 accgcgggat cagcctcgcc attcgccttg cgcgcgatat cggcggcaaa catttgcgga
     3361 ttgtcggaga tgcctttgac gcgctggaat ttggtgccgg cggccggaat gagtccggcc
     3421 gacagccccg ttgagccggt cggactagca tcgcgctcca gcaccacgac gtcgccgcct
     3481 gcttcattcg ccgccaaagc cgcacacagt cctgcggcac cggcgccgat gatcagcagc
     3541 ggcacctttg tggcaaagtc ctcgcccttt gagaaagcga cattactcat ggacccctga
     3601 atatagctat ggcagcgcga acatcgccgc ccataacgat tgttatttgt tccagccctt
     3661 catgggatat tcgaatttgg ccgtggcgcg attctccggc caaaccgaaa catacaaagc
     3721 cgtccccgct cgaaacaaga tttctccgtt gctcacggcc atgagctcgg tcaccggcgc
     3781 ggtgacccgc tttacacata gctggccgta caaatcgctt gaagatcgcg gacgcctgcg
     3841 cgctaaagcg atggatgaag gagtttggcc accgcccggc gggcccgacc agcttgcggt
     3901 acagcaaaca gacatctatc tgcccgcatc cttctcgcca attcgttgat cgttgccttg
     3961 gaagatcagg acgatctcaa acgatcggtt tcggccagat cgaggcgccc ctgcccatct
     4021 atggcgaccc cgtagtcacg gcgagcctcg tccgcggtta tcaggccatc gaggacatcg
     4081 tcgagcacac ggtgagggtc acgcgtgcgc gggtcgccga agccaccgcc ccctggcagg
     4141 ccgaggcaga ttgcatcgcg tgccggcaca gtctgacgcc cctttgggcg gatcggcttg
     4201 ccggaacgaa gcttgaccga gccatttgcg cccggcttgc cccgctcgcg gcctcgtgcg
     4261 gcgttgcgga cgcgctcaaa attgcaaagg agcgcgattg gcgcagcacc cgctccaccc
     4321 agctcgatga cctgtccaag tcccccacga aacttgcccg gaccaccgga gccctcacga
     4381 aattcgcggc gatagaacac aacgggagcc acgctttcgg tagcctcgac tggaattgtg
     4441 cgcacgcctg acggaaacgc ggtcgcgctg agtccgtcct tgcccggccg cgcgccggct
     4501 ccgccgcagt ggaagatcac ggtgctgaat gcgggcagct cgtttgcatc gacgcctttt
     4561 tcgatctcat cgaccaatga gccgcccccg aagatttgcg ggttccacag cgacgatgcg
     4621 ccttcggccg gaacgccgcc ggccatgacc tggtgcagac agccgaacac ggcgtcgggc
     4681 agcatgtgac cgaccgtgtg acgcgccgct accggccagg gccgattcac gttgaggacg
     4741 cagccctcgg gggcgctcac ggtaatggga gcgagcgaac cggcattgtt cggaacatcc
     4801 ggcgccacca ggcatttaac gccaaacgcg gtgtaagcga ggcaatagtt gtagacgaca
     4861 ttgatgccgt aacccgacgc cggcgacgtt ccgtcgaaat caacgtgtat tccttcgtga
     4921 gaaatggtca gcgcagcatt caacacgagc gacttttcat aaccgtccat cgtcagctga
     4981 ttgcgatagg tgccctttgg cagggcacgg atgcgcgcaa gtgttgcctc gcgtgaggct
     5041 tcaacgatcg tgtcaccgag ccggtcgaga ttgctgatct cgaactcgtc catcatttcg
     5101 atcaggcggc ggattccctc atcgttggat gccgcacatg catagatatc gccctcaacc
     5161 tgcaatggct cccgcacatt ggctcgaac
//
LOCUS       DATDHO010000819         3535 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_289479, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000819 DATDHO010000000
VERSION     DATDHO010000819.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3535
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_289479"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1255)
                     /locus_tag="VIY07_15970"
     CDS             complement(<1..1255)
                     /locus_tag="VIY07_15970"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HEY6383287.1"
                     /translation="MGANFGIAGMDWQQRVNWDRLREYRIERARAMMKKHGLGALLCM
                     YDENVRYITGTLTPGWNRLKPGLRYAMLCGDGRPILFEQGDLGFQIERHSPWLPKENV
                     RHSFAWIKGAAGPASTQQVNKFTKAVLQAMKENGVAGQKLGVDFIDINMINIFRENNI
                     NWVDGMTPMMEARAVKSEDEQECFRIVGAIGDATHWECMKFLRPGITENQVTAHLMEY
                     LYNIPGMEDVEDVIVSSGPNTWPNWRNFSDRIIQPGDIVFMDLAALTWNGYKSCYYRT
                     YCVGKEPSKEQKDTYATALEWLYDSIGAVKVGATTRDIALKWPSAMETWGYEDEEQAA
                     ANLWGHGLGLAQYDPPVISRIWSLDHPVEIKEGMTFALETQHGKRFRYGVRIEEMLIV
                     KKNDIEIVSNFPVKQITVVDPLPGYG"
     gene            1398..2357
                     /locus_tag="VIY07_15975"
     CDS             1398..2357
                     /locus_tag="VIY07_15975"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEY6383288.1"
                     /translation="MATIPLRQIRAVIAVCEEGSFTRAAQRENATQSGISQHVAAVER
                     ALKVKLFERTTGGVTPTPAGLRYYKRCVEAVGTLEHAAEEARSLAGEVTGDLRIGLMP
                     TFTRAVLAPVLDDFVPRCPEVRLHIVEGYSALLTEMVLDDALDFAVVPAFEGTIGLKS
                     RMLVRDREMMISGPRAGFKALAPLHLAKCRPLKIVVPGPDNIRRRNLETYFQSHGVEI
                     AAMLEMDAMIATLEFVARSDWVTILPSVISVNDIGRGELIVNPIIEPELHAEFVVIQP
                     KRRTLSTQARLFLQRFEAEVAHIHRVWAATIAPHETKLRAANL"
     gene            2669..3412
                     /locus_tag="VIY07_15980"
     CDS             2669..3412
                     /locus_tag="VIY07_15980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383289.1"
                     /translation="MSAPDQQDTATDNQDATDPSNLLYYAPRHLRDRANSLRTKQFDG
                     QSLEIRSAPSLDPQISDEPPETLPELRLTAPEPGSMEAVWRLSQRDRKRQVLGPALRF
                     AGVAALAAGLATTYVVIFTEVPDWNAANEVAAMPMAIATKAHDESVVESKATENIAAA
                     TENVAAKTEESESVEVKVTTLNPVDLTTPSLPAATPEENAALFREFLRWQETSAQRDT
                     PTARPNAAVAREAPARRKRKARRRQSDDE"
BASE COUNT          708 a         1081 c         1016 g          730 t
ORIGIN      
        1 ccccataacc cggaagcgga tcgacgaccg tgatctgctt cacagggaag ttcgacacga
       61 tctcgatgtc gttcttcttc acgatcagca tttcctcgat gcgcacacca tatcggaagc
      121 gcttgccatg ctgggtttcc agcgcaaacg tcatgccctc cttgatctcg accggatgat
      181 cgagcgacca gatgcgcgaa atcaccggcg gatcgtattg cgcgagaccg agtccatgtc
      241 cccagagatt ggccgccgcc tgttcttcat cttcatagcc ccaggtttcc attgccgacg
      301 gccacttgag cgcgatgtcg cgcgtggtag cgccgacctt caccgcgccg atcgagtcat
      361 acagccattc gagcgcggtg gcgtaggtgt ccttctgctc tttagacggc tccttgccga
      421 cacagtaggt gcggtaatag caggacttgt agccgttcca cgtcagcgcg gccaaatcca
      481 tgaatacgat gtcaccgggc tggataatgc ggtcggagaa gttgcgccag ttcggccagg
      541 tgttcggacc cgacgagacg atgacgtcct cgacgtcctc cattcccggt atgttgtaga
      601 gatattccat caggtgcgcc gtcacctggt tttcggtgat gccggggcgc aggaatttca
      661 tgcattccca atgcgtcgca tcgccgatcg ctcccacgat gcggaaacat tcctgctcgt
      721 cctcgctctt gacggcgcgc gcttccatca tcggggtcat gccgtcgacc cagttgatgt
      781 tgttttccct gaagatgttg atcatgttga tgtcgatgaa gtcgacgcca agcttctgac
      841 cggcaacgcc gttttccttc atcgcttgca gcaccgcctt ggtgaacttg ttcacctgct
      901 gcgtcgaagc ggggcccgcc gcgcctttga tccacgcaaa cgagtggcgc acgttttctt
      961 tcggcagcca cggcgaatgc cgctcgatct ggaatccaag atcgccctgc tcgaacagga
     1021 tcggacgacc gtcgccgcac agcatggcgt agcgcagacc tggcttgaga cgattccagc
     1081 cgggcgtcag cgtgcccgtg atgtagcgga cgttctcgtc gtacatgcaa agcaaggcac
     1141 cgaggccgtg cttcttcatc atcgcgcgcg cgcgttcgat gcgatattcg cgcagccggt
     1201 cccagttgac ccgctgctgc caatccatac cggcaatgcc gaaattcgct cccatggccg
     1261 tcctcccgac cggcgcgttc gcgcgccttt gctgaattgg cgaaatccta agccggttgg
     1321 cagctaaagc cgaaataata tattctgcgc ccgatcatta gattttctga tgccctcttt
     1381 tttcaggcac tctccacatg gccacgatcc cgctgcgaca aattcgcgcc gtcattgcgg
     1441 tgtgcgaaga aggctcattc acccgcgcgg cgcagcggga aaatgcgacg caatctggca
     1501 tctcgcagca cgtggcagcc gtcgagcgcg ccctgaaggt aaagcttttc gagcgcacca
     1561 ccggcggcgt taccccgacg ccggcaggcc tgcgctacta caagcggtgc gttgaggcag
     1621 tcggcacgct cgagcacgcc gcggaagagg cgcgctcgct cgcgggtgaa gtcaccggcg
     1681 atcttcgcat cggattgatg cccacattca cgcgcgcagt gctcgccccg gtgctcgatg
     1741 atttcgtgcc gcggtgtccg gaagtgcgcc tgcacatcgt ggaaggctac agcgcgttgc
     1801 tgactgaaat ggtgctcgat gatgcgctcg actttgccgt ggtgccggct ttcgagggta
     1861 ccatagggtt gaaatcgaga atgttggtgc gtgaccgcga gatgatgatc tccggcccgc
     1921 gcgcgggctt caaggcactc gccccattgc atctggcaaa atgccggcca ttgaaaatcg
     1981 tggtcccagg tcctgacaac atccgccgtc gcaatctcga aacatatttt cagtcacatg
     2041 gcgtcgaaat tgctgcaatg ctggagatgg acgccatgat tgccacgctc gaattcgtgg
     2101 cacgttccga ctgggttacc atcctaccaa gcgtcatctc ggtgaatgac atcggccgcg
     2161 gcgaattgat cgtgaatccc atcatcgagc cggagctgca cgcggaattc gtggtcattc
     2221 agccgaagcg ccgcacccta tcaacgcagg cgcgactctt cttgcagcga ttcgaagcag
     2281 aggttgcgca catccacagg gtttgggccg cgactatcgc tccgcacgaa accaaattgc
     2341 gggcggcaaa tttgtagcgc cattcgcttt gcatacggcc gacagtttct cgttaccgca
     2401 gtgatggcgt gaatcacatt tttgtctagg ttcggaccaa ctaaagcctg tgcaccaatc
     2461 ccataattcg catagcggaa agttgccgag tggggactag gcgatggacg cttggacggc
     2521 gcgcagagac gacgattcct gcccattgtt gcgtggcgtt gaagctcatc attcagttgc
     2581 agcgttctgc cgatagagag ccggtcacag cgcctgcggc ctgttcgtat ctgccgtgtc
     2641 gcgtggccgg tcttggaagg agttcggaat gagtgcgcca gaccaacaag acaccgctac
     2701 agacaaccag gacgcgaccg atcccagcaa tctgctttac tatgcgccac gccatctgcg
     2761 tgatcgcgcc aattctttac gcacgaaaca gtttgacggg cagtctctcg agattcgatc
     2821 cgcgccctcg ctcgatccgc aaatttctga cgaaccgccc gagaccttgc cggagctccg
     2881 cctgaccgcg cccgaacctg gcagcatgga agcggtttgg cgtctaagcc aacgagaccg
     2941 aaagaggcag gtgctgggcc ctgcccttcg ctttgccgga gtggcagccc tcgctgcggg
     3001 acttgcgact acttacgtcg tgatttttac cgaagtcccg gactggaatg cagccaacga
     3061 agtcgcggcc atgccaatgg ccatcgcgac gaaggcgcat gatgagagcg ttgtcgagtc
     3121 gaaagcgacc gaaaatattg ccgcagcaac cgaaaatgtt gccgcgaaga ccgaggaatc
     3181 agaatccgtt gaggtcaagg ttacgacttt aaatccggtc gacctaacga cacctagcct
     3241 accggcagca acgcccgagg aaaatgcggc gcttttccgg gaattcctgc gttggcagga
     3301 aacgtcggcg cagcgagata cgccgacggc gcgccccaat gcggcggtgg cgcgcgaggc
     3361 accagcgcgg cgcaagcgca aggctcgcag acgtcagagc gatgacgaat aaccgctatc
     3421 cgccgagcga cgccgccacc gcctgcgcct ccggaacgac atcgtggtca tagagccgct
     3481 tgcggaaagc tgcatgcgct ttgatctcgg catcgcggat tcctaaatcg gcgta
//
LOCUS       DATDHO010000820         2106 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_437471, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000820 DATDHO010000000
VERSION     DATDHO010000820.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437471"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..370
                     /locus_tag="VIY07_15985"
     CDS             17..370
                     /locus_tag="VIY07_15985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEY6383290.1"
                     /translation="METLPVEEAVKLAGRDDTVLVDVRDVRELERDGRVPGAFHCPRG
                     MLEFWIDPQSPYHKPIFAQDKKFVFFCAGGLRSALAAQTAQRMGLRPVAHIHGGFSAW
                     KKSGGPIDAAPAKSN"
     gene            468..1148
                     /locus_tag="VIY07_15990"
     CDS             468..1148
                     /locus_tag="VIY07_15990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY6383291.1"
                     /translation="MALKLIIGNKNYSSWSMRPWIAMKVANIPFEETVISLNAPDFKQ
                     VVGSASGSGKVPVLIDGDIRVWESLSILEYLAEKFPQARLWPTDSAARVMARTVSSEM
                     HAGFVPLRRHMPMNMWRPVKKRALTPEVEANIRRIEAIWTDCRARFGATTDGAFLFGQ
                     FGAADAMYTPVVARLHTYGVDVGKVSRGYMEAVMGLPAWREWHAAAITEPWVLAEDEV
                     DWPTVLKN"
     gene            complement(1172..1645)
                     /locus_tag="VIY07_15995"
     CDS             complement(1172..1645)
                     /locus_tag="VIY07_15995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEY6383292.1"
                     /translation="MSRRSEVSAGILVFRREPRLELLLAHPGGPYWRNKDDGAWSIPK
                     GNVESGDLLSCARREFNEETGLVAEGPFIALTPLRQKSGKTVHAFALEADFDLARFSS
                     NIFEMEWPPRSGKLQKFPEIDRIAYFALPSACRKILSGQRPFIEELVERLRKSVA"
     gene            1901..>2106
                     /locus_tag="VIY07_16000"
     CDS             1901..>2106
                     /locus_tag="VIY07_16000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase"
                     /protein_id="HEY6383293.1"
                     /translation="MILTPNHNVWRLVHANRAAVLIDGADYFGAVRSAMVKAKHSILI
                     AGWDIHSQTRLAGSNEPTDGYPLL"
BASE COUNT          452 a          586 c          665 g          403 t
ORIGIN      
        1 ggccgcggaa cgggagatcg agacgctgcc cgtggaagag gccgttaagc tcgcgggccg
       61 tgacgatacc gtgctggtcg acgtccgcga tgtccgcgag ttggagcgcg atggacgcgt
      121 gccaggcgcc ttccattgcc cgcgagggat gctggagttc tggatcgacc cacaaagccc
      181 gtatcacaaa cccatattcg cccaggacaa gaagttcgtg tttttctgcg ccggcggctt
      241 gcgttccgcg cttgccgcgc agaccgcgca gcgaatgggc ctcaggccgg tggcgcatat
      301 ccacggtggt ttcagtgcct ggaaaaagtc aggcggtccg atagacgccg cgccagcgaa
      361 gtcgaactga ccgccattcg cgccattgct tgaatcgatc agaacaaatg gcttgtccac
      421 cgcggctggc tcctgcaatt tgacgcctga atagaagcgg ggcggtcatg gcgctgaaat
      481 tgatcattgg aaacaagaac tattcgtcat ggtcgatgcg gccgtggatc gcaatgaaag
      541 tggcgaacat tccgttcgag gagacggtga tttcgctgaa cgcgcccgac ttcaaacaag
      601 tcgtcggttc agcgtcgggc agcggcaagg tgccggtgtt gatcgacggc gatatccggg
      661 tttgggaatc gctgtcaatt ctggaatatc tggcggaaaa atttccgcag gcacggctct
      721 ggccaaccga cagcgcagca cgggtgatgg cgcgtaccgt atccagcgaa atgcatgccg
      781 gctttgtgcc gctgcggcgg catatgccga tgaacatgtg gcggccggtc aaaaagcgcg
      841 cgctgactcc tgaggtcgaa gcaaacatca ggcgcataga agcaatctgg accgactgcc
      901 gcgcgcgctt cggcgcgacg acggatgggg ccttcttgtt cggccaattc ggcgcggccg
      961 acgccatgta cacgcctgtc gtagcgcggt tgcacaccta tggagttgat gttggcaagg
     1021 tgtcacgcgg ctatatggag gccgttatgg ggctaccggc ctggcgggag tggcacgctg
     1081 ccgcgattac agaaccttgg gttctggccg aggacgaagt cgactggccg acagtgctga
     1141 aaaactaagc gcagttcggc agggatcagg atcaagcaac gctttttctc aggcgctcga
     1201 ccaactcttc gataaaggga cgctgtcccg acaaaatttt tctgcacgcc gagggaagtg
     1261 caaaataggc aatacggtcg atctccggaa acttttgcag tttgcccgag cggggaggcc
     1321 attccatctc gaatatattg ctggaaaagc gagcgagatc gaaatccgct tcgagcgcga
     1381 atgcatgcac cgttttcccg ctcttttgac gcaagggcgt gagggcgatg aatgggcctt
     1441 cagccacgag accggtttcc tcgttgaatt ctcgtctggc gcaagaaagc agatcccctg
     1501 attcaacatt gcctttgggt atggaccacg cgccgtcgtc cttgttgcgc caatagggcc
     1561 ccccgggatg cgcgagcagg agctcgagtc gcggctcgcg gcggaaaaca agaatgccgg
     1621 cgctgacctc ggatcggcgt gacatggcga cttgttcctc cagggccaag aaaaacacgg
     1681 accgcgggaa ggtccaaatc gcaaaatacc tgcggatttc gctgccgcgg aaccgaaaat
     1741 cggtagtgga attatttgaa ggtcgcaggc gtcacaggag aacagatcag gtgagatggt
     1801 tcggcacggg catggagatg gtgtccaaac gcgtggcctg ctggggccgc gggtagccga
     1861 gcaggcgcat cccacgtcga accagaaccg atcagcccga atgatactga cgcccaatca
     1921 caacgtctgg cgcctcgttc atgccaatcg cgccgcagtg ctgatagacg gcgccgatta
     1981 tttcggcgcg gtccgcagcg ccatggtcaa ggcgaagcat tcgatcctga tcgcgggatg
     2041 ggacattcat agccagaccc ggcttgccgg ctccaacgaa ccgacagacg gctatccgtt
     2101 gctatt
//
LOCUS       DATDHO010000821         4946 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_190851, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000821 DATDHO010000000
VERSION     DATDHO010000821.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4946)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4946)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4946
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_190851"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(72..1190)
                     /locus_tag="VIY07_16005"
     CDS             complement(72..1190)
                     /locus_tag="VIY07_16005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEY6383294.1"
                     /translation="MSWSLNIGRVAGTIVRVHLTFLLFLAWIFAASYASGGAATAWDS
                     LVFMVLLFLCVLLHEFGHIFTARAFGVPTPYVTLLPIGGVAQLERIPEEPWEEFLIAI
                     AGPMVNIVITAALIVLFGANLQANAAAAVDNMKIPLVDRLAAVNLFLALFNMIPAFPM
                     DGGRVLRALLASRLGYVRATEIAASIGQFVAFALGFIGLLYNPILIFIAIFVYLAASS
                     EAHMVALRAASRGVPVSYAMMTQFATLSPQAQIDEAVQTLLQTSQGEFPVVDDAGKPV
                     GVLGRADLIRAIKTLGPDARVADAMTAEIPTISHRSTLEQAFKLLQQKSAPAVGVTDA
                     GGKLVGFVTSETIAEMMMLQEALPRGVRIGPWSRPAGA"
     gene            1361..1717
                     /locus_tag="VIY07_16010"
     CDS             1361..1717
                     /locus_tag="VIY07_16010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkvA family protein"
                     /protein_id="HEY6383295.1"
                     /translation="MAFARSNFWPDRDDERAFRDQFWRKVRHVAASIPFVEDSLTAHY
                     CAFDKATPLPVKASLFGALAYFLLPTDAVPDVLPVLGFTDDAAMLAAAVKLMASHIRP
                     EHRAAAKAKLAEFSKA"
     gene            complement(1718..2692)
                     /locus_tag="VIY07_16015"
     CDS             complement(1718..2692)
                     /locus_tag="VIY07_16015"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003960 - NADPH:quinone reductase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase family protein"
                     /protein_id="HEY6383296.1"
                     /translation="MKALLCTRYGTPDDLELADIAEPAPGAGEVAVRIHAAALNFFDT
                     LIIAGKYQFKPAPPFSPAAEFAGTVESLGAGVSAFKAGDRVVGYMTYGAARERVVISA
                     DRLIKVPDKLDLDRAAGVCITYGTTFHALKDRAELKSGESLAVLGAAGGVGLAAVELG
                     KIMGARVIACASSDEKLAFASKHGADAAINYANSDLKDALRRCTDGRGADVIYDPVGG
                     PYTEPALRSIAWKGRFLVIGFAAGDIPKLPLNLVLLKGCDVLGVFWGSFIDRDPEGHR
                     ANTRQLLDWCEQGRLSSHVHAVYPLAEGPAALKAIAARQVMGKILLRP"
     gene            2870..3529
                     /locus_tag="VIY07_16020"
     CDS             2870..3529
                     /locus_tag="VIY07_16020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HEY6383297.1"
                     /translation="MNTNNLFLTFCGILAACVLSASAAAQQQQQQKKPASPADSTQQK
                     KSNAPADSSKKSATPAEPTQKKSASPTDQAVLLGQFGDWGAYRATPAGKKICFALSKP
                     TSTTSEPSGRNRDPSYAFVSTRPSEKVKNEVSVIVGYQQKAGQDASASIGTARYAMYT
                     QNDGAWIKNAAEETQMVETLRKGSDLVVKSESAKGTKTTDTYSLKGIAQALDKVAEEC
                     K"
     gene            3585..4817
                     /gene="rlmN"
                     /locus_tag="VIY07_16025"
     CDS             3585..4817
                     /gene="rlmN"
                     /locus_tag="VIY07_16025"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEY6383298.1"
                     /translation="MVKSADIPMGPSEFVEKIPLERYVAPEKPSLIGLTRAQLADALG
                     SFGVPQEQIKMRVQQLWHWIYFRGVTSLDEMSSVSKDLRAALAERYTLARPEIVAEQV
                     SVDGTRKWLLRLPGEVQGERPHEVECVYIPDTERGTLCVSSQVGCTLTCTFCHTGTQR
                     LVRNLTAGEIVGQVMAARDRMGDWPGGTRPADGVVPNGERCITNIVMMGMGEPLYNFE
                     AVRDALLIVADGEGIAISKRRITLSTSGVLPNIERTGAEIGCMLAVSLHAVRDELRNE
                     LVPLNRKYPIADLLEACRNYPGVSNAKRITFEYVMLKDVNDSIEDAKALVRLLKGIPA
                     KINLIPFNPWPGTRYECSDWEQIEKFSQVVFDAGYASPVRTPRGRDILAACGQLKSTT
                     EKLSARERMALRAMAMVE"
BASE COUNT         1064 a         1474 c         1488 g          920 t
ORIGIN      
        1 atcagcgcgg aaggtgcacg cagtttctga caactggaaa aagctaaaac gacgggtttg
       61 tgactcccgg gtcaagcgcc ggccgggcgg ctccatggac cgatgcgcac accgcgcggc
      121 aaggcttcct gcagcatcat catctcggca atggtttcac tggtgacaaa tcccacgagc
      181 ttgccgccgg cgtcggtgac gcccacggcc ggcgccgatt tctgctgcag aagcttgaag
      241 gcctgctcga gcgtggaacg atggctgata gtcggaattt ccgcggtcat cgcatccgca
      301 acacgtgcgt ccggccccag tgttttgatg gcgcggatca ggtcggcgcg cccaaggact
      361 ccgaccggtt tgccggcatc gtcgacgacc ggaaattccc cttggctcgt ctgcaacaag
      421 gtttggacgg cctcatcgat ctgcgcctga ggggatagcg tcgcgaattg cgtcatcatc
      481 gcgtagctta cgggaacgcc gcgcgaggcc gcgcggagcg cgaccatgtg cgcctccgaa
      541 gacgcagcga gatagacgaa gatcgcgata aagatcagga ttggattgta cagaagcccg
      601 ataaacccca gcgcgaaggc gacaaactgt ccgattgaag ctgcgatttc ggttgcgcgc
      661 acataaccga gccgggaggc gagcagagct cgcagcacac gtccgccgtc catcgggaat
      721 gcgggaatca tattgaacag ggcgaggaac aggttgactg cggccagccg atccaccagc
      781 gggatcttca tgttgtcgac cgccgctgcg gcgtttgcct gcaagttggc gccgaacagg
      841 actatgagcg ccgccgtgat gacgatattg accataggtc cggcgatggc gatgaggaat
      901 tcctcccacg gttcctcggg gatgcgctcg agctgtgcaa cgcccccaat cgggagcagc
      961 gtcacgtaag gggtcggcac gccgaatgcg cgcgccgtga agatgtgacc gaactcgtgc
     1021 agcagcacgc ataaaaatag caggaccatg aacacgaggc tgtcccaggc cgtagccgca
     1081 cctcccgacg cgtaactcgc ggcgaaaatc caggcgagga aaaggaggaa ggtgaggtgc
     1141 acgcggacaa tggttcccgc cactctgccg atattcaatg accaggacat ggatgcctcg
     1201 tagggtcgga gtcgacgtgc aaaaggtagt atcggcccgg accctttgcg agggcaggtg
     1261 ttcgatgcag gaagggttac gtcatggcgc gagaattgac cgggtaagcc cgaaaagcgc
     1321 ggtccttgcg gataccgctg ttgctaacca catcgtcgtc atggcattcg cacgatcgaa
     1381 tttctggccg gacagggacg acgaacgcgc gtttcgcgac caattctggc gcaaggtgcg
     1441 ccacgtggcc gcgtcaattc cctttgtcga ggattcgttg actgcccact actgcgcgtt
     1501 tgacaaggcc acgccgttgc ccgtcaaagc atcgctgttc ggtgcgctgg cctattttct
     1561 cttgccaacg gatgccgttc cggacgtgct gcccgtcctt ggctttacag atgatgcggc
     1621 aatgcttgcg gctgctgtca agctgatggc cagccacatt cgcccggaac atcgcgcagc
     1681 ggcaaaagcc aagctcgcgg aattctcaaa ggcataacta gggccgcaag agtatcttgc
     1741 ccatgacttg ccgtgcggcg attgccttga gggcagccgg cccctctgca aggggataaa
     1801 ccgcatgtac gtgcgatgac agccttccct gttcgcacca gtcgagaagc tgccttgtat
     1861 tggcacgatg gccttccggg tcccggtcaa tgaacgaccc ccagaacacg ccaagcacat
     1921 cgcagccctt caacagcacc agattgagcg gcagcttcgg aatatcgccc gcggcaaaac
     1981 cgatgaccag gaaacgtcct ttccatgcga tcgagcgtag cgcgggctcc gtgtagggac
     2041 cgccgaccgg atcataaatg acatcggcgc cgcgcccatc cgtgcaacgc cgcaaggcat
     2101 ccttgagatc gctgttggcg taattgatcg ctgcatcggc gccgtgcttg cttgcaaaag
     2161 ccagcttttc atccgacgag gcgcaggcga ttacgcgcgc gcccatgatt tttccgagct
     2221 cgacggcagc aaggccgacg cctccggctg cgccgagcac cgccagtgat tcgccagatt
     2281 tgagttcggc acgatccttg agggcatgaa aggtcgttcc atacgtaatg cagacgccgg
     2341 cggcgcggtc gagatcgagc ttgtccggaa ccttgatcaa tctgtcagcg ctgatgacaa
     2401 ccctctctcg cgcagccccg taagtcatgt agccgactac ccggtcgcct gccttgaatg
     2461 cggaaactcc tgcacccagg ctttcgacag taccggcgaa ttcggcggca ggcgaaaaag
     2521 gcggggccgg cttgaactgg tacttaccgg cgatgatcag ggtgtcgaaa aagttcagcg
     2581 ccgcggcgtg gattctaacc gccacctcgc cggcgcctgg cgccggctcg gcaatatcgg
     2641 ccagctccag atcatcgggc gtgccgtagc gggtacagag cagtgctttc atggatcgga
     2701 taaatgtttg tgcagcgcga atagcaaggc ctcgcactac gggcaagccg gcatggcggt
     2761 cggcgctcga agccgccgag ccagacggta ttgccgcctt cacattgccg acattcgccg
     2821 ataatgcgct aatatccacc tgattcctga tgcgtcaccg gtaggcccga tgaacaccaa
     2881 caatttgttt ctgacctttt gcggcatcct ggcggcctgc gtgctcagtg cctcggcggc
     2941 ggcgcagcag caacaacaac aaaagaaacc agccagcccc gccgactcaa cgcagcagaa
     3001 aaagtccaac gccccggccg attcgtcaaa aaaatcagcc actccagccg agccgacaca
     3061 gaaaaaatcc gccagcccga ccgaccaggc tgtattactc ggacagttcg gcgattgggg
     3121 cgcctacagg gcaacacccg ccgggaaaaa gatttgcttc gccctgtcca agccgacgtc
     3181 gaccaccagt gagccctcgg gccgcaatcg cgatccctct tacgccttcg tttccacgcg
     3241 tccgtcggaa aaagtgaaga acgaagtttc ggtcatcgtc ggctaccagc aaaaagccgg
     3301 tcaggatgcg agcgcctcca tcggtactgc cagatatgcg atgtacacgc agaatgacgg
     3361 cgcctggatc aagaacgctg cggaagaaac gcagatggtg gaaaccctgc gcaaaggctc
     3421 agacctggtg gtcaaaagcg aatcggcaaa aggcacaaaa accaccgaca cctattccct
     3481 caagggcatc gctcaggcgc tcgacaaggt cgcggaggag tgcaagtagg gctttgggat
     3541 cctatattgc ctgtcagcgc taaatggcgc cgatgcttca tccgatggtc aagtctgcgg
     3601 acattccaat gggcccgagc gagtttgtcg aaaaaatccc gcttgagcgg tatgtggcgc
     3661 ccgaaaagcc gtcactgatc ggccttacgc gagcccagct cgccgatgcg ttgggctcat
     3721 tcggcgtgcc ccaggagcag atcaagatgc gcgtgcagca gctctggcat tggatctatt
     3781 ttcgcggcgt gacgtcgctc gacgaaatga gcagcgtgtc caaagacctt cgtgctgcgc
     3841 tggccgagcg ttacacgttg gctcgcccgg agatcgttgc agagcaggtc tcggttgacg
     3901 ggacccgcaa gtggctgctg cgactgccag gtgaggtcca gggcgagcga ccgcacgaag
     3961 tcgaatgtgt ctacattccc gacactgaac gaggcacctt gtgcgtgtcc agccaggtcg
     4021 gttgcacgct cacttgcacg ttctgtcaca cagggaccca gcgactggtc agaaacctga
     4081 cggcgggaga gatagtcggc caggtcatgg cggcgcgcga ccgcatgggc gattggccgg
     4141 gaggcacgcg accggcagac ggcgtcgtgc cgaatggcga gcgctgcatc accaacatcg
     4201 tgatgatggg catgggcgag cccctctaca atttcgaagc ggtgcgcgac gcgctcctga
     4261 tcgtggcaga tggggagggt atcgccatct ccaagcggcg cattaccctt tccacatcag
     4321 gagttttgcc gaatatcgaa cgcaccggcg ccgagatagg ctgcatgctg gccgtatcgc
     4381 tgcatgccgt gcgggacgag ctgcgaaatg agcttgtccc gctcaatcgc aaatatccga
     4441 tcgccgattt gctggaagcc tgccgcaact atcctggcgt ttcgaacgcg aaacgcatca
     4501 ccttcgagta cgtcatgctc aaggacgtta acgattcgat cgaggatgcc aaggcgctgg
     4561 ttcggctcct caaaggcatc cctgcaaaga tcaatctcat tccattcaat ccttggccag
     4621 gcaccagata cgaatgctcg gactgggagc agatcgagaa gttctcgcag gtcgtgttcg
     4681 atgccggcta tgcgtctccg gttcgcacgc cgcgcgggcg cgatatcctt gcagcctgcg
     4741 gccagctcaa gagtacgacc gaaaaattat ccgcgcgaga gcggatggcg ctgcgtgcca
     4801 tggcgatggt ggagtgatgg cgtcgatctg atcgcaagaa atactttcag gattaagtca
     4861 tgtctctctt cggccgcatc attgtgataa tcgtggcgct gatcctggct atcattgcgg
     4921 caggcattac gcttgcgatc ggaatc
//
LOCUS       DATDHO010000822        11975 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_482350, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000822 DATDHO010000000
VERSION     DATDHO010000822.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 11975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11975
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_482350"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..189)
                     /locus_tag="VIY07_16030"
     CDS             complement(<1..189)
                     /locus_tag="VIY07_16030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF924 family protein"
                     /protein_id="HEY6383299.1"
                     /translation="MAATADEVVSFWRGAGPDRWFNKDASFDEEIRQRFLESHEAAAA
                     GKLTDWEQSAQGALALLIL"
     gene            complement(201..1892)
                     /locus_tag="VIY07_16035"
     CDS             complement(201..1892)
                     /locus_tag="VIY07_16035"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase"
                     /protein_id="HEY6383300.1"
                     /translation="MERLWLRQYPPGVPADIDPSRYSSLVAMFEEGFSTFAAREACVC
                     MGKSLTYAELDEASHALAAWLQSRGLKQGARVAIMMPNVLQYPVALAGTLRAGCTVVN
                     VNPLYKPRELEFQLTDAGAEAIIVLENFAAVLEQALPKTPVKHIVIASLGDMLGRIKG
                     ILVNNVVRHIKRMVPRYSLPKAVRFNDMLAAGRKSSFVKPTVGPDDIAFLQYTGGTTG
                     VAKGAMLVHRNLVANMLQVEAWNQPMVDLPPKTDQLLIVTALPLYHIFALTGCFLLSV
                     RTGGSCLLIVNPRDIRGLIKELSHYKVNIFPAVNTLYNALLHNPDFGKIDWSMLKCTV
                     GGGMAVQKSVADAWVKATGKPIIEGYGLSETSPVLTCNRGDIAEWTGTIGLPLPSTEI
                     SIRDDEGREVPLGEQGEICARGPQVMAGYWNSPAETAKAMTADGFFRTGDIGVMDDQG
                     RVRIVDRKKDMIAVSGFKVFPNEVEEVAMSHGGLLECAVVGMPDKHSGEAAKLFAVKK
                     NPDLTANELRAFLATKLASYKVPKQIEFRDELPKTNVGKILRRALRDEAARPAAN"
     gene            complement(1999..3114)
                     /locus_tag="VIY07_16040"
     CDS             complement(1999..3114)
                     /locus_tag="VIY07_16040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY6383301.1"
                     /translation="MSQASPRAERKGPPTPIPLTVLTGFLGAGKTTLLNRLLKDPALA
                     ETAVIINEFGEVSLDHLLVEYVGDNMVLLQSGCLCCTMRGDLIDALETLLRDLDNRRC
                     KFRRVLLETTGLADPAPVLHTAMSHPYLLLRYRLDGVVTVVDAINGEMTLDAHAEAVK
                     QAAVADRIVLTKTDLATSSQQEQIMARLRALNPAAPILDAARAEAVPGRLLGSGLYDP
                     DRKIPDVKKWLAEEAYAHEHDHHRHDVNRHDDHIGAFVLYADEAIPAGTLEMFLELLR
                     ATHGSKLLRVKGIVKLSEMPDTPVVVHGVQHVFHPTVRLDRWPDEDHRTRLVFITRDL
                     PERAVRELFEAFLGIVAPDRPDRAALTDNPLVPFGGH"
     gene            complement(3111..4388)
                     /locus_tag="VIY07_16045"
     CDS             complement(3111..4388)
                     /locus_tag="VIY07_16045"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEY6383302.1"
                     /translation="MIVFSRRSFRTLVLGFAGILSLACADRARADALLLIEASTGKVL
                     HAENATLPWYPASVTKLMTAYTTLRAVKEGRISINTLLTVSRNAAAQQPTKMGFKIGA
                     TVTVDNALKMLMVKSANDVAVTLAEGVGGSLEGFADLMNANARRLGMTQSNFVNPNGL
                     PAENHVSSARDLAILARAVIREFPEYDGYWHIASIRYGNRVMRNYNSLIYRYPGADGM
                     KTGFICASGYNVVASATRNGRRLIAVVLGSWSGAVRAQKAAQMLERGFNSGGLSWLTP
                     SLGTVDALAPVDAQPPNLREEMCGAHRRKPPSEDNEEEPEESASNASEESGNGQAFML
                     SGAKPAKFVLGPPVETTPPVVVFTGPADRPDTVEQIASATPKKKKKAADKTEASKKPA
                     KAAKTEDAKSAKSAKTAKPAKPAAKPKVSSTTQ"
     gene            4561..5727
                     /locus_tag="VIY07_16050"
     CDS             4561..5727
                     /locus_tag="VIY07_16050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HEY6383303.1"
                     /translation="MTTCVVGWAHTPFGKLSDESVESLVVRVAGEALVDAGIGPKDVD
                     EIVLGHFNAGFSAQDFTASLVLQASPDLRFKRATRVENACATGSAAVHQGIKTIEARA
                     ARVVLVVGVEQMTTTPAAEIGRNLLKASYVREEADIDGGFAGIFGKIAGLYFQKWGDQ
                     SDALAMIAAKNHKNGVGNPYAQMRKDLGYEFCRTESEKNPFVAGPLKRTDCSLVSDGA
                     AAVVLADVETALKMKKAVAFRAAEHVQDFLPMSKRDILKFEGCAHAWKQALAKAGLKL
                     GDLSFVETHDCFTIAELIEYEAMGLTAEGQGARAVAEGWTQKNGRLPVNPSGGLKAKG
                     HPIGATGVSMHALSAMQLMGSAGDLQLKDARLGGIFNMGGAAVANYVSILERLK"
     gene            complement(5752..6780)
                     /locus_tag="VIY07_16055"
     CDS             complement(5752..6780)
                     /locus_tag="VIY07_16055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383304.1"
                     /translation="MSAYRIGRWAWVALLPAALVLMTGAAAAETSVSFSLDYEIDGRA
                     APFLVPFDKGYYKAEGVNVSIAPASGSQETIERVASGTYEMGLADINALIRFRDANRA
                     PPVKAVFMLYNRPPFAVIGRKSRGINQPKDLEGKTIGAANDGAYAQWPIFVRTNGIET
                     SKVKIDAVSFPVREPMLAAGQVDAIIGFSYFSFIDLKDKGVPVDDIAVLLMADYGLEL
                     YGNAIIVNPNFAAGHPEAVQGFLRAFMKGLKETVKQPSSAISSVLQHNGTARKNVELE
                     RLTMAIRENIVTPEVKTNGYGEIDEERFVRAVDQLAWSYKFKGPKPKAEDIFDFSFLP
                     PAASRKYN"
     gene            6998..10105
                     /gene="putA"
                     /locus_tag="VIY07_16060"
     CDS             6998..10105
                     /gene="putA"
                     /locus_tag="VIY07_16060"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HEY6383305.1"
                     /translation="MPLAKVEKAVRDIPPLRAPYAPADEEIARGLLAAARRPSDAEAR
                     IDARATRLVEAIRARRGGLGGVEDFLHAYAMSTKEGLALMVLAEALLRVPDPETADRL
                     IEDKLRAGDWMHHDPRSESFLVSASAWTLGLTARVIHPGETPEGIVDTLIKRIGLPAV
                     RAATRQAMRLLGSHFVLGETIEEALKRAGSQREFLYSFDMLGEGARTGADAHRYFESY
                     ADAIREIGKASGDETLPRRPGISVKLSALHPRYEPLSRNRVLDELTPRLLELAQLAKH
                     HELNFTVDAEEADRLELSLDVIAAVLRESSLAGWDGFGLAVQAYQKRAGAVIDWITEV
                     AKTLDRRLMIRLVKGAYWDTEIKRAQERGLPDYPVFTRKAMTDLCYLDCVRKLLARRP
                     LLYPQFATHNALTVACVIEDAGGATGYEFQRLHGMGEALYEALLDDLPDLTCRIYAPV
                     GGYADLLAYLVRRLLENGANSSFVSVAADPAVPIENILQRPQSRIGDPTHARHSHIPL
                     PRDLFRPVRRNSSGVEFGDRASLEALLSEIRAAPRTANAKSLVDGIEIAGRERPALSP
                     IDGREIGTVQESDKAIVNSALAAAHSAFQSWDATPIANRARILERVGDLIEQNRGRLI
                     ALLQVEGGKTIDDCVSEVREAADYCRYYAGEARRSLAPMPMPGPTGESNELRMRGRGI
                     FICISPWNFPLAIFAGQIAGALAAGNCVVAKPAEQTPLIAFETVKLFHAGGVPPVVLQ
                     LVLGDGKVGAMLTADRRVAGVAFTGSTEVARAINQALAAKDGPIPPLIAETGGINPMI
                     VDATALPEQVSDDVIVSAFRSAGQRCSALRLLCVQEEIADRVFEMVEGAARELALGDP
                     RDPGTNIGPVIDSEAKEKLERWISRAEQSGAVLFRLDGNMPVQGTYVAPAILELSSAR
                     ELKEEVFGPVLHVVRWHENELDRLLDDIAANGTALTLGIHSRIDTTIAHIAHRLPHGN
                     VYVNRNMIGAVVGSQPFGGSGLSGTGPKAGGPHYLQRFALEQTVTVNTAASGGNATLL
                     SEDED"
     gene            10270..10650
                     /gene="hisE"
                     /locus_tag="VIY07_16065"
     CDS             10270..10650
                     /gene="hisE"
                     /locus_tag="VIY07_16065"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEY6383306.1"
                     /translation="MTDSVARLYDAVIAVRGSDPAKSRTARLLRAGRAKMAKKLAEEA
                     VEVVIDAMHGQPEAVVKESADLLYNLVVLWVHAGVRPEEVWAEMHRRELMFGLAEKVP
                     KDFVRGAARRKVVPLEARRIRKRR"
     gene            10711..11292
                     /locus_tag="VIY07_16070"
     CDS             10711..11292
                     /locus_tag="VIY07_16070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HEY6383307.1"
                     /translation="MLRRLYDWCLAAAHKPHALWTMGAVSFAESSFFPVPPDVMLIPM
                     ALARPERAYVMATWCTVTSVAGGLLGYAIGALLYDSVGAWLISLYGYGDKVEAFREAY
                     AEWGAWIILLKGLTPIPYKIVTITSGFAGYNLWLFTLFSIITRGARFFVLAFILHRYG
                     DRARHIIEKRLGLWVLIGAAVLVIGIVAALYLF"
     gene            11456..11950
                     /locus_tag="VIY07_16075"
     CDS             11456..11950
                     /locus_tag="VIY07_16075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383308.1"
                     /translation="MPGLFAFALMLISTVAAAQDQTAPNQKTPQNEGFIAAVSRWFEE
                     QTANVNSTFRDARKKVEGFSSAASDAAKTTVEGARDAADAVARIPNARAVSGHEKCPP
                     APNGAPDCVTAATAMCKAKGFASGKSVDMTTAEICPAKVYLSGRSTGPECTTETFVSR
                     ALCQ"
BASE COUNT         2259 a         3507 c         3738 g         2471 t
ORIGIN      
        1 caggatgagc agcgcgaggg cgccttgcgc gctctgctcc cagtcggtca attttccggc
       61 agcggccgcc tcatgggatt cgagaaagcg ctgtcggatc tcctcgtcga agcttgcatc
      121 cttgttgaac caacggtccg gccccgcccc gcgccagaac gaaacgacct catccgcagt
      181 cgcggccatt gccatcctgt tcaattggcc gccggtcggg cagcttcgtc gcgtaatgcg
      241 cgccgcagga tcttgccgac attggttttg ggcaattcgt cgcggaactc gatctgcttc
      301 ggcaccttgt agctggctaa tttggtagcc aaaaacgcgc gcaattcgtt ggccgtgagg
      361 tccggattct ttttcacagc gaacagcttg gccgcttcgc cggagtgctt atcgggcatg
      421 cccaccaccg cgcattccag caagcccccg tggctcatcg ctacttcttc cacctcgttg
      481 ggaaatacct tgaagccgga aaccgcaatc atgtccttct tgcggtcgac gatgcgcacg
      541 cgtccttggt cgtccatcac gccgatatcg cccgtgcgga agaaaccgtc cgcggtcatg
      601 gccttggctg tttccgccgg gctgttccag tagcctgcca tgacctgggg gccgcgcgca
      661 cagatttctc cctgctcgcc gagcggcact tcgcgccctt catcatcgcg gatcgatatt
      721 tccgttgaag gcaaaggcaa tccgatagtg ccggtccatt cggcgatatc gccgcggttg
      781 cacgtcagca ccggcgaggt ttccgaaagt ccataaccct cgataatcgg cttgcccgtt
      841 gccttcaccc aggcgtcggc gacggatttc tgtaccgcca tcccgccgcc tacggtgcac
      901 ttgagcatgc tccagtcgat cttgccgaag tccggattat gaagcagcgc gttgtaaagc
      961 gtgttcaccg ccgggaagat gttcaccttg tagtgactga gttccttgat cagtccgcga
     1021 atgtcgcgcg ggttcacgat caggagacac gatccacccg ttcgtacgct gaggagaaag
     1081 catcccgtca gtgcgaagat gtgatagagc ggcaatgccg tgactataag aagttggtcg
     1141 gtcttcggcg gcaggtcgac catcggctga ttccatgctt ccacctgcag catgtttgcc
     1201 accaggttgc gatggaccag catggcgcct ttggcgacgc ctgtcgtccc accggtgtat
     1261 tgcaggaatg caatatcgtc tgggcctacc gtgggtttta cgaaactgga tttgcgacct
     1321 gccgcgagca tgtcattgaa cctaacggct ttcgggagcg agtagcgcgg caccatcctc
     1381 ttgatgtgac gaacaacgtt gttgacgaga attcctttta tccggccgag catgtcgcca
     1441 aggcttgcaa tcacgatatg tttgaccggg gtttttggca gcgcctgttc gagcacagca
     1501 gcaaagttct cgagaacgat aattgcctcg gcgccggcat cggtgagctg gaattccagt
     1561 tcgcgcggct tgtagagcgg attgacgttc accacggtgc agccggcgcg cagcgtgccg
     1621 gcgagcgcaa ccgggtactg caggacgttc ggcatcatga tcgccacgcg cgcgccctgc
     1681 ttgagtccgc ggctttgcag ccacgcggcg agagcatgcg acgcctcgtc gagttccgcg
     1741 tacgtcagcg atttgcccat gcagacacag gcctcgcgtg ccgcgaaggt gctgaagccc
     1801 tcctcgaaca ttgcgacgag tgatgaatac cgagacgggt caatatcggc gggaacgccc
     1861 ggcggatatt gccgcagcca aagccgctcc ataacgcttc ccccgcgccg ggtcatttta
     1921 tccggatgcc ggcgctcgat tcctcagcat gattctaacc ggctctgcgt gcaaggccag
     1981 cgaaaccagg ataccgaact aatgcccccc gaacggaacc agggggttat cggtgagggc
     2041 cgcacgatcg ggccgatcgg gcgcaacaat gccgagaaaa gcttcgaata gctcccgaac
     2101 ggcgcgttcc ggcaggtcac gcgtgatgaa aaccagcctg gtgcggtgat cctcatcggg
     2161 ccagcgatcg aggcgaaccg tggggtgaaa gacgtgctga acgccgtgca caaccaccgg
     2221 cgtgtccggc atttcggaaa gcttcacgat gcccttcacc cgcagcagct tggagccatg
     2281 cgtggcccgc aacagttcca ggaacatctc gagcgtaccg gcggggatcg cttcgtccgc
     2341 ataaaggacg aaagcgccga tgtgatcgtc gtggcggttg acatcatgtc ggtgatgatc
     2401 gtgttcgtgg gcataggcct cctcggccag ccattttttg acatccggga tcttcctgtc
     2461 cgggtcgtag aggccgcttc ccagcaatcg gccgggtacc gcctcggcgc gggcagcatc
     2521 gagaattggc gccgccgggt taagcgcgcg aaggcgcgcc atgatctgct cttgctgcga
     2581 agaggtcgcc agatcggttt ttgtcagcac gatgcggtcg gcgacggcgg cttgcttgac
     2641 tgcttcggca tgggcatcaa gcgtcatctc gccattgatg gcgtcgacca ctgttacgac
     2701 gccgtcgagc cggtagcgca gcaacagata gggatgcgac attgcggtat ggagaacggg
     2761 ggccgggtcg gcgagaccgg tcgtctccaa tagcacgcga cgaaatttgc aacgacggtt
     2821 gtcgagatcg cgcagcagcg tctcaagggc atcgatgagg tcgccgcgca tggtgcagca
     2881 cagacagccg gattgcagca gcaccatgtt gtcgccgaca tactcgacga gcaggtggtc
     2941 gagagacacc tcgccaaact cgttgatgat gacggcagtc tccgccaggg cgggatcctt
     3001 caggagccga ttgagcaatg tggttttccc cgcgccaaga aaaccggtca gcaccgtaag
     3061 cgggattggg gtcggcgggc cttttcgctc ggcgcgcggc gaagcttggc tcattgcgtt
     3121 gtagaactga ccttgggctt ggcggccggc tttgccggct tggcagtctt cgccgattta
     3181 gccgattttg catcttccgt tttggccgcc tttgccggct tcttggacgc ttccgtcttg
     3241 tcagctgctt tctttttctt ctttggcgta gcgctcgcga tctgctcgac cgtatcgggg
     3301 cgatcggcag gcccagtgaa tacgacgacg ggaggcgtgg tctcgaccgg cggcccaagc
     3361 acgaatttcg ccggcttggc gcccgacagc atgaaggcct gtccattgcc cgattcctcg
     3421 ctcgcgttgg aagcggactc ctcgggctcc tcctcgttgt cttccgacgg tggcttgcgg
     3481 cgatgcgcgc cacacatttc ctcgcgcagg ttcggaggct gcgcatctac tggcgccaat
     3541 gcatccacgg ttccgagcga tggcgtaagc caggacagac cgccactgtt gaagccgcgc
     3601 tcgagcatct gggccgcctt ttgtgcgcgc accgcgccgg accaggatcc gagcacgacc
     3661 gcgatcagcc ggcggccatt gcgcgtagcc gaggcgacga cgttgtatcc ggatgcacat
     3721 atgaatccgg tcttcatgcc gtcggcaccg ggatagcgat agatcaacga attataattg
     3781 cgcattacgc ggttgccgta acggatcgac gcgatgtgcc agtagccgtc gtactcggga
     3841 aattcacgga taaccgcgcg tgcgaggatg gccaggtcgc gcgccgatga cacgtgattt
     3901 tctgccggca gaccgttcgg attgacaaag ttgctttgcg tcatgcccag gcgtcgggca
     3961 ttcgcattca tcaaatcggc aaaaccctcc agcgaaccgc cgacgccttc cgcgagcgtc
     4021 accgcaacat cgttggcgga cttgaccatc agcatcttca acgcgttgtc gacggtcacg
     4081 gtcgcgccga tcttgaaccc catcttggtg ggctgctgcg ccgccgcgtt acgcgatact
     4141 gtgagcaacg tattgatcga gatgcgacct tccttgacgg cgcgcagggt tgtgtaggct
     4201 gtcatcagtt tggtgacgga ggccgggtac cagggaagcg tggcgttctc ggcgtgcaaa
     4261 actttcccgg tggaagcttc gatcagcagc agtgcgtcgg ccctggcgcg atcggcgcag
     4321 gcgagcgaca atataccggc gaagccgagg acaagggttc ggaaggagcg ccttgaaaaa
     4381 acaatcatcg ttcgcgcttc agggtcctag ggcctcggaa acggggaagt tccatatgtg
     4441 accgtgctag gctatccaag ctttggatgg taggcaaagg ccggtaaact gcggctgaac
     4501 aaatatggtg actggctctt ctacgaagaa agcgaccaaa gttcggcaaa ggaggcattt
     4561 atgaccacct gtgttgttgg gtgggcccat acccctttcg gtaaacttag cgatgaaagc
     4621 gtggaaagcc tcgtcgtgcg cgtggctggc gaagcgctgg tggatgccgg aattggtccc
     4681 aaggacgtgg acgaaattgt cctcggccat ttcaatgcag ggttttcggc gcaggatttt
     4741 accgcttcgc ttgtactgca agcctctccg gatttgcgct tcaagcgagc gacgcgcgtc
     4801 gagaacgcct gcgcgaccgg gtccgccgcc gtgcatcagg gcataaagac aatcgaggcc
     4861 cgcgctgcac gcgtcgtgct tgtcgtcggc gtcgagcaga tgacaacgac cccggccgcg
     4921 gaaatcggtc gcaatttgct caaggcatcg tatgtgcgcg aggaggccga tatcgacggc
     4981 gggttcgccg gcattttcgg caagatcgct ggtctctatt ttcagaaatg gggcgatcag
     5041 tccgacgcac tcgccatgat tgctgccaaa aaccacaaga atggtgtcgg caatccctat
     5101 gcgcagatgc gcaaggactt gggctacgag ttctgccgta ccgagagcga gaaaaatcct
     5161 tttgtggccg gcccgcttaa acgcaccgat tgttccctgg tttcagacgg tgctgcggct
     5221 gtcgtgctcg ccgatgtcga aacagcgctt aaaatgaaaa aggccgttgc atttcgcgcg
     5281 gctgaacacg ttcaggactt cttgccgatg tcaaaacggg acatcctgaa gttcgaaggt
     5341 tgcgcgcatg cctggaagca ggcgctcgcg aaggcagggc tcaagcttgg cgatctgtcc
     5401 ttcgtcgaga cgcacgattg cttcaccatt gcagaactca tcgaatatga agccatgggg
     5461 ctgaccgccg aagggcaggg cgctcgcgcg gttgcggagg gctggacgca gaagaacggc
     5521 cgacttccgg tgaatccctc cggcggtctg aaagcaaaag gtcacccgat cggcgcgacc
     5581 ggcgtgtcca tgcacgcgct ctccgcgatg cagcttatgg gcagtgccgg cgatcttcag
     5641 ctgaaggatg cccgtctggg cggcatcttc aacatgggtg gcgcggcggt agcgaattac
     5701 gtgagcattc tggagaggct caagtagcgc agtcgagggc cgtttgcggc gctagttgta
     5761 tttccgactg gcggcgggag gcagaaacga gaaatcgaaa atatcctcag ccttcggctt
     5821 ggggcctttg aatttatagg accatgcgag ctggtcgacc gcgcggacga agcgctcctc
     5881 gtcgatttcg ccatagccgt tcgttttcac ttctggagtg acgatgtttt cccggatggc
     5941 catggtcagc cgttcaagct cgacattttt tctcgccgtt ccattgtgtt gaagcaccga
     6001 gctgattgcg gacgaaggtt gcttgacggt ttccttcagg cctttcatga acgcccgcag
     6061 gaagccctgc acggcctccg ggtgcccggc cgcgaagttc gggttcacga tgatggcgtt
     6121 tccataaagc tcgaggccgt agtctgccat caacagcacg gcaatatcat cgaccggaac
     6181 gcctttgtcc ttgagatcaa taaaggagaa atacgagaaa ccgatgatcg catccacctg
     6241 gccggcggcc agcatcggct cgcgtaccgg gaagctgacg gcgtcaattt tcaccttgga
     6301 agtctcgatg ccgtttgtcc gcacaaaaat gggccattgc gcataggcgc cgtcgtttgc
     6361 cgcgccgatc gttttgcctt cgaggtcttt cggttgattg atgccgcggc tcttgcgacc
     6421 gatcaccgcg aagggcggac gattgtagag catgaagacg gccttgaccg gtggtgcccg
     6481 gttggcgtcc cggaagcgga tcagtgcatt gatgtcggcg agccccatct cgtacgtacc
     6541 cgacgccacg cgctcgatcg tttcttgcga gccgcttgcg ggagcgatac tgacgtttac
     6601 accttcggcc ttgtagtagc ctttgtcgaa cggcaccaag aatggcgccg cgcgcccgtc
     6661 aatttcatag tcaagcgaga agctgacgct cgtttcagcc gccgcggcgc cggtcatcag
     6721 gaccaaggcg gcgggaagca gcgctaccca ggcccatcgg ccaatacggt aagcgctcat
     6781 cactcggtcc tcctctcgcg gctcgcccct ctgttttatc gtgcccaaat gagcaaagga
     6841 cagcgcgatg caaagggcaa tatgcgggcg ggcgatcgcg atacaatttg ctctgttatg
     6901 actaacaccg gccgatagga ttgctgcggc cgcaatcggg aacacaagaa aacgctcatt
     6961 tgcgatagac ttgccgtaag ttcggaggct tttgcctatg ccgctggcga aagttgagaa
     7021 ggccgtgcgc gacattccgc cgctgcgtgc gccttacgcg ccggcggacg aggagatcgc
     7081 gaggggcctt ctggcagcgg ctcgtcgccc gagcgacgcc gaggcgcgca ttgacgcgcg
     7141 ggccacgcgc ctggttgagg caatccgtgc gcgcaggggc gggctcggcg gagttgagga
     7201 tttcctgcac gcatacgcga tgtcgaccaa ggaagggctg gcgttgatgg tgctggccga
     7261 agcgctgctt cgcgtcccgg atcccgagac tgccgaccga ttgatcgagg ataagcttag
     7321 ggccggcgat tggatgcacc acgacccgcg ctcggagtcg tttctcgttt cggcatccgc
     7381 ctggacgctt ggccttacag cccgcgttat tcatcccgga gagaccccgg agggcattgt
     7441 tgacacgctg atcaagcgga tcggattgcc tgcggtgcgg gcagccacgc gtcaggcgat
     7501 gcgcctgctt ggctcgcatt ttgtgcttgg cgagacgatt gaagaagcgt tgaagcgggc
     7561 cggttcgcag cgtgaatttc tctattcatt cgacatgctg ggcgagggtg cccgcaccgg
     7621 ggcggacgca catcgatatt tcgaatcata cgccgacgcg attcgcgaga tcggcaaagc
     7681 gtccggcgac gagacgttgc ccaggagacc tggtatttcc gtcaaattat ctgccctgca
     7741 tccgcgctat gagccgttgt cgcgcaaccg cgtcctcgac gagctgacgc ccaggttgct
     7801 tgagctggcg cagctggcga agcaccacga actcaatttt acagtcgacg ccgaggaagc
     7861 cgacaggctg gagctatcac tggatgtgat tgccgcggta ttgcgcgagt cctcgctcgc
     7921 gggatgggat ggcttcgggc ttgccgttca ggcctaccaa aagcgcgccg gcgccgtgat
     7981 cgactggata accgaagtcg cgaagacgct cgatcgccgg ctgatgatcc gcctcgtgaa
     8041 aggcgcctac tgggacactg agatcaaacg cgcgcaggag agaggcctgc ccgactatcc
     8101 agtcttcacg cgaaaggcaa tgaccgacct ctgctacctc gattgcgtac gaaaactgct
     8161 ggccaggcgg cccctgcttt atccgcagtt cgcaacccac aacgccttaa cggtagcgtg
     8221 cgtgatcgaa gatgccggtg gcgccaccgg ctatgaattc caaaggctgc acgggatggg
     8281 cgaagcgctc tatgaggcgc tgctcgatga cctcccggat ctgacctgtc ggatctacgc
     8341 accggttggc ggatatgccg atttgctcgc ctatctggtg cgtcgactgc tggaaaatgg
     8401 cgccaattct tccttcgtgt cggtcgcagc ggatcccgcg gtaccgatcg aaaatattct
     8461 gcagcggccg cagagccgga tcggcgaccc cacgcacgcg cgccattcgc acattccgct
     8521 tccgcgcgac ctttttcgtc ccgtccgtcg caactccagc ggagtcgaat tcggcgaccg
     8581 cgcttcgctc gaagcgctgc tcagcgagat ccgtgcggct ccgcgaaccg cgaatgcaaa
     8641 atcgctcgtc gacggaatcg agatcgcggg ccgggaacgg ccggcgctgt ccccgatcga
     8701 tggtcgggaa attggcaccg tgcaggaaag cgacaaagcc atcgtgaact cggcgctcgc
     8761 cgcagctcat tccgcatttc agtcctggga tgcaacgccg attgccaatc gggcgcggat
     8821 acttgaacgc gttggcgatt tgatcgagca gaatcgcgga cgactcatcg cgctgctgca
     8881 ggttgagggt ggaaagacga tcgacgactg cgtttcggag gtgcgcgagg cagccgacta
     8941 ttgtcgatac tatgccggcg aggcgcgccg ctcgcttgcc ccgatgccga tgccggggcc
     9001 aaccggcgag agcaacgaac tgcggatgcg cgggcgcggt attttcattt gcatcagccc
     9061 gtggaatttt ccgctggcaa tctttgccgg tcagatcgcg ggggcactgg ccgccggcaa
     9121 ttgcgttgtc gccaagcccg cggaacagac gcccctcatc gcgttcgaga cggtgaagct
     9181 tttccacgcc ggcggtgtgc cgccggtagt gcttcaactg gtgctgggcg acgggaaagt
     9241 cggggccatg ctcaccgcgg atcgccgcgt tgcaggtgtt gccttcaccg ggtcgacgga
     9301 ggttgcgcgc gcgatcaacc aggcgctggc ggcgaaagat ggcccgatcc cgccgctaat
     9361 cgcggaaact ggcggcatca acccgatgat cgtcgatgcc acggcgctcc ccgaacaggt
     9421 gagcgatgac gtgatcgtat cggcgtttcg ctctgccggt cagcgctgct ccgcgctccg
     9481 cctcctgtgc gtacaagaag agatagccga ccgcgtgttc gagatggtcg agggggcggc
     9541 tcgggagctc gcgctcggcg atccgcgcga tccggggacc aatatagggc cggtgatcga
     9601 cagcgaggcg aaggaaaagc tggagcggtg gatttcacgc gcggaacaga gtggcgcggt
     9661 gttgttccgt ctcgacggca atatgccggt gcagggtacc tacgttgcgc ccgcaattct
     9721 ggagctcagc agcgcgcgcg agctgaagga agaagtgttc ggcccggtgc tgcatgtcgt
     9781 gcgatggcat gaaaatgagc tcgatcgtct tctcgatgac attgccgcga acggtacggc
     9841 gctcactctc gggatccatt cccgcatcga tacgaccatt gcccacatcg cgcaccgtct
     9901 tccgcatggc aacgtttacg tgaaccgaaa catgattggc gctgtcgtcg gctctcagcc
     9961 attcggcgga agtggactgt ccggcaccgg acccaaggcc ggggggcccc attatctcca
    10021 acgctttgcg ctcgagcaga cggtgacggt gaacaccgct gcatcgggtg gcaatgcgac
    10081 actgctgtca gaagacgaag actagggcgg gtgtcgccgc tgacgtttca aagccgaaat
    10141 gccgcttttt ggacctattt cccctcttaa accagaagta accgtgatgg cagccaagta
    10201 ccgcgctcta tggctggccg tcacatgcgt taaccggttt tgtgcgcgga tcgggtattc
    10261 tgggattgaa tgactgattc ggtcgccagg ctttacgatg ccgtgatcgc ggtccggggc
    10321 tctgatcctg cgaaatcgcg aacagcccgg cttttgcgcg caggtcgcgc aaagatggcc
    10381 aagaaactcg cggaagaggc ggtcgaggtc gtcatcgacg ccatgcacgg ccagcccgaa
    10441 gccgtggtga aggaaagtgc cgacctcttg tacaatctcg tggtgttgtg ggttcacgcc
    10501 ggtgtccgtc ccgaggaagt ctgggccgag atgcatcggc gtgagttgat gttcggcctc
    10561 gcggaaaaag tgccaaagga ttttgtccgc ggcgcagcgc ggcgtaaggt cgtcccgctt
    10621 gaagccaggc gtattcgcaa gcgccgctga tccgtcacaa ttttcctcac gagtatacgg
    10681 atgaccgttg aggctgccga gccgcgatct ttgctgcgcc gtctttatga ctggtgcttg
    10741 gctgctgccc ataagccaca tgcattgtgg actatgggcg ccgtatcgtt tgcggaaagc
    10801 tcgttctttc cggtgccccc cgacgtaatg ttgatcccca tggctttggc gcggccagag
    10861 cgggcgtacg tcatggcgac gtggtgcaca gtgacgtcgg ttgcgggagg actgctcggt
    10921 tatgccatcg gcgcgcttct ctacgattcc gtcggcgcct ggcttatcag tctttatggc
    10981 tacggcgaca aggtcgaggc gtttcgcgaa gcctacgccg aatggggtgc ctggatcatc
    11041 ctgctcaagg gtctgacccc gatcccctac aagatcgtga caattacatc gggatttgcc
    11101 ggctacaacc tttggctgtt tactttgttt tcgatcatca cccgcggtgc ccgatttttt
    11161 gtgctggcgt ttatcctgca ccgctatggc gatcgcgccc gtcatattat tgaaaagcga
    11221 ttgggcttat gggtattgat cggggccgct gttctcgtca ttggtatcgt tgcagcgcta
    11281 tacttgtttt gagggagcag gcgctcctca atttggccac ctgtcggcct taaacaccga
    11341 tggcgaattg ggagcaagct gcgtttcgac ggctgggcgg cacctgcttt tcgcagatat
    11401 gggcatcgga cgggcatcga tttttcattg cggtaatcgg gggggcgctt cgcccatgcc
    11461 cggtttgttt gctttcgcgt tgatgctgat atcgaccgtg gccgcagcgc aggatcagac
    11521 ggctccaaat cagaaaactc cccagaacga aggttttatt gcagccgtca gccgctggtt
    11581 cgaggagcag acggccaacg tgaattcaac gttcagggat gcgcgcaaga aggttgaggg
    11641 tttcagcagc gcggcgagcg atgcggccaa gaccacggtc gaaggcgcga gggatgccgc
    11701 ggacgcggtc gcgcgcattc cgaacgcccg cgctgtcagc gggcatgaga aatgtccgcc
    11761 tgcacccaac ggcgcgccgg attgcgtcac cgcggcaacc gcgatgtgca aggccaaagg
    11821 cttcgcgtcg ggaaagagcg tcgacatgac gacagccgaa atctgcccgg cgaaagtcta
    11881 tttgtcgggc cgatcgaccg gccccgaatg cacgaccgag acatttgtct cccgtgcgct
    11941 ctgccaatag ctttttggcc ggcaagcgcc gcttg
//
LOCUS       DATDHO010000823         3070 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_388033, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000823 DATDHO010000000
VERSION     DATDHO010000823.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3070)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3070)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3070
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388033"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VIY07_16080"
     CDS             <1..382
                     /locus_tag="VIY07_16080"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007826842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEY6383309.1"
                     /translation="WGHARDYVEGMWLILQQSKPDDYVLATGEAHSVREFVEKAFAYT
                     GRKIEWQGKGESERGVEAGTGRILVEVDPRYFRPTEVDCLVGDPSKARRQLGWRHRVS
                     FDELVEQMVKQDLMLAKHHIPGRP"
     gene            complement(423..1295)
                     /locus_tag="VIY07_16085"
     CDS             complement(423..1295)
                     /locus_tag="VIY07_16085"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6383310.1"
                     /translation="MSMASIHVGGINVQYFAEGAGEPIVFLHCTGSSGRQWAGLAETL
                     REEFEVIAPDLCGYGATTHWPGFGTFNLAVEADLVDALIRQLKKPAHVVGHSFGGAVG
                     LQLALRYPEHLKSLTVIEPAAFHLLRDGDDEDERALRQISEIATKIGSAVNCGDYVGA
                     MRRFVDYWNGDGSWDGLPNSQRIALATRINKVTLDFWATLNEPTRLEDLADLDVPTLI
                     LSGGRSPFPTRRICFHLARTLPEVNQRTIDEAGHMLPSSHFREIAPLIRFHCDARNHL
                     RSESETVLPARACA"
     gene            complement(1316..2632)
                     /locus_tag="VIY07_16090"
     CDS             complement(1316..2632)
                     /locus_tag="VIY07_16090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEY6383311.1"
                     /translation="MTTPSYHPETMLLHAGWRADPATGAVAVPIYQTTSFQFRDTEHA
                     ANLFALKELGNVYTRIMNPTNDVLEKRIAALEGGVAALALASGQAASAFALQNLARAG
                     DNVVSSTDLYGGTWNLFAHTLKDQGIEVRFVDPIDPENFRRATDDRTRAYYAESLPNP
                     KLTVFPIAEVAAIGRPLGIPLIVDNTATPFLMRPLEHGAAVVVYSATKYLGGHGNSIG
                     GLIVDGGNFDWAAQPERQPALNTPDPSYHGAIWTEAVKPLGPVAYAIKVRVTLLRDIG
                     AAMSPFNAFLIIQGLETLALRMKEHCKNAQAVVDFLLKRKEVKRIIHPSQQKGVHRQR
                     ADWYLGDQFGGLVGFELAGGKEAGRKFIDALQLHYHVANIGDARSLAIHPATTTHSQL
                     TAEEQLASGVSDGYVRLSVGIEHIDDIISDIKQGLEAASRWAIRAA"
BASE COUNT          613 a          898 c          921 g          638 t
ORIGIN      
        1 ctgggggcac gcacgcgatt atgttgaagg catgtggctt atccttcagc agtccaagcc
       61 agatgactat gttctggcga caggtgaggc ccattctgtg agagagttcg tagaaaaggc
      121 ttttgcctac accggccgga agattgagtg gcaaggcaaa ggcgagtccg agcgcggcgt
      181 cgaggcgggc accgggcgga tcttggtcga ggtggatccg cggtacttcc gcccgacgga
      241 agtggactgt ctggtaggcg acccatcgaa agcgcgacgc cagcttggct ggcggcaccg
      301 cgtctcattc gatgagcttg tcgagcagat ggtgaagcaa gacctcatgt tggcaaagca
      361 ccacataccc gggcggcctt aaacgagtga aatttttccg tcccgccggg cgcatgaagc
      421 tctcaggcgc atgcgcgcgc cggcaaaacg gtttcacttt ctgatctcag gtgatttctc
      481 gcgtcgcaat gaaatctgat gagcggcgcg atttccctga aatgactcga cggaagcata
      541 tggccggctt cgtcgatcgt ccgctggttt acttcaggca aggtgcgcgc gagatggaag
      601 cagatccggc gcgtcgggaa aggtgaccgg ccgccggaaa ggatcagagt cggcacgtcc
      661 aaatcggcca gatcttcgag gcgcgttggt tcattgagcg tggcccagaa atcgagcgtg
      721 accttgttga tccgcgttgc gagcgcaatc cgttgcgaat ttggcaagcc atcccacgat
      781 ccgtcgccgt tccagtagtc gacgaaccga cgcattgccc cgacataatc gccgcaattg
      841 acggcacttc cgatcttcgt cgcgatttcg gagatctgcc tcagcgcgcg ctcgtcctcg
      901 tcatccccat cccgcagcaa gtggaatgcg gccggttcaa tcacggtcag gctcttcagg
      961 tgttcagggt accgcagcgc taattgcagt ccgacggcac ccccgaatga atggccaacg
     1021 acatgcgccg gcttcttgag ctgacggatg agagcgtcaa caaggtcggc ttcgacagcc
     1081 aggttaaagg tgccgaagcc cggccagtgt gtcgttgcgc cgtagccgca gagatcaggg
     1141 gctatgacct cgaactcctc gcgaagagtt tcggcgagtc ccgcccactg ccgccctgaa
     1201 ctgccagtgc agtgcaagaa cacgatcggc tcgccggcgc cctcggcaaa gtattgaaca
     1261 ttgatgcccc cgacgtggat gcttgccatg ctcatgtctc acttccaaaa tccgatcagg
     1321 cggcccgaat ggcccacctt gaagccgctt caaggccctg cttgatgtcc gagatgatgt
     1381 cgtcgatgtg ctcgatgccg acggacaggc gcacgtagcc atctgaaacg ccgctggcca
     1441 gctgctcctc ggccgtcagt tgcgagtgcg tcgttgtagc gggatgaatt gcaagactcc
     1501 gggcatcgcc gatattggca acgtgatagt gcaactgcaa agcatcgatg aacttgcgtc
     1561 ccgcttcctt gccgccagca agctcgaatc cgaccagccc gccaaactgg tcgcccagat
     1621 accagtctgc gcgctggcga tgaacgccct tctgttgtga aggatgaata atccgcttca
     1681 cctctttccg cttgagcaga aaatcgacca ctgcttgtgc attcttgcaa tgttccttca
     1741 tccgcaatgc gagcgtctca agaccctgga taatgagaaa cgcgttgaac ggtgacatcg
     1801 cggctccgat gtctcgcagg agggtaaccc ggaccttgat cgcataggcg accggtccga
     1861 ggggcttgac cgcttccgtc cagatcgctc cgtgatagct ggggtcgggc gtattcaggg
     1921 ctggctggcg ctccggttga gccgcccagt caaagttgcc gccatcgacg atcagaccgc
     1981 cgatcgagtt tccatgtccg ccgagatatt tcgttgccga atacacgacg actgcggcgc
     2041 cgtgctcaag cggcctcatg agaaacggcg tcgccgtatt gtcaacgatc agcggaatgc
     2101 cgagcggacg cccgatcgct gccacctcgg caatggggaa gaccgtcagt ttcggatttg
     2161 gcagactttc ggcatagtac gcgcgggttc tatcgtcggt cgcgcgcctg aaattctccg
     2221 gatcgatcgg gtcgacgaag cgaacctcga ttccctggtc tttgagggtg tgggcaaaca
     2281 gattccaggt ccccccataa agatcggtgg aactgacgac gttgtcaccc gcacgcgcaa
     2341 ggttctggag cgcgaaagcg gaggctgcct ggccggacgc aagcgccagc gcggccacac
     2401 cgccttcaag ggcagcaatg cgcttttcca gcacgtcatt ggtcggattc atgatccgcg
     2461 tatagacatt gcccagctct ttcagcgcaa agagattggc cgcgtgttcg gtatcgcgga
     2521 attgaaaaga ggtcgtctga tagatcggta ccgcgacagc accggttgcc gggtctgccc
     2581 gccaaccggc gtgaagaagc atcgtttcag gatgatatga gggtgtggtc atctgtcggt
     2641 cccttgaatc caaactggcg ctttgacacc gggtctatac cgaccggcca attggccgtc
     2701 cttgcgtaac ccttgatttt tgcttgagga catctggatt ttgaccgcaa ccccgttcgg
     2761 gcgcgggaac cgggtgttgg cccggcaaaa acgccccgat tcgcggcgcc aactcattcg
     2821 gttgagactt ggggtcggga taaacgggct gcggcgctcc tggtggccgg atcccgtcag
     2881 aacgctttca gcggaatgga accggacttg ctatccagct ttgaccgggt cggcgtccga
     2941 gcctgcactg ggttcgttct ggcccaaaag attaagccaa ctttgtgcaa tccaaagcca
     3001 cgcggccttg tcggtatcat tggaggcgtg gcttacctgt tcttgcgcct cgcgcgcata
     3061 ctgctcgtac
//
LOCUS       DATDHO010000824         2792 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_86934, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000824 DATDHO010000000
VERSION     DATDHO010000824.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_86934"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..526
                     /locus_tag="VIY07_16095"
     CDS             <1..526
                     /locus_tag="VIY07_16095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="carboxypeptidase"
                     /protein_id="HEY6383312.1"
                     /translation="RGFAANAYVKNLRSGENKIVSRYDATFAADDPYPELRASRSPDP
                     ILDVVTRAYGGAMASYARNELGFKTEMTYALLASDVHWDWQGGRLQASAEDDLRTLLA
                     YDSSFRLLIAHGYADMITPYAMTRYILDHMPSFDPPGRAQLKLYRGGHMLYLDPLSRK
                     AFSDDAAAFYRTAE"
     gene            651..1553
                     /locus_tag="VIY07_16100"
     CDS             651..1553
                     /locus_tag="VIY07_16100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018044825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY6383313.1"
                     /translation="MRLKAIITTAAAIGLLSGTAVAQDGTLKKIKDTGTITIGHRESS
                     VPFSYYDDKQQVVGYAMDLCNRIVDAVKANLKLTKLEVKLQPVTSATRIPLLANGTTD
                     LECGSTTNNLERQKQISFTITHFVTANRFVSKKSANLKKLEDLKGKTVVSTSGTTNIK
                     QITELNTEKNLGLNILPAKDHAEAFLMVETGRAAAFVMDDILLYSLVAGSKAPKDYQI
                     STDALSVEPYGIMLRKDDPAFKKVVDDAMTATYKSGDINNIYDKWFLKPIPPKSVDLG
                     VPMSDAFKKVIAKPTDSGDPKDYQ"
     gene            1628..2377
                     /locus_tag="VIY07_16105"
     CDS             1628..2377
                     /locus_tag="VIY07_16105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEY6383314.1"
                     /translation="MNYNWNWGIFFQLSPDGTYTYLQLLLFGAGWTLATALLAWAIAL
                     SVGAVIGVIRTSPVPWLVRLGNAYVELFRNIPLLVQMFLWYFVLPELLPEAIGDWLKQ
                     SANASFYNAVICLGLYTSARVAEQVKAGILSLRSGQSMAGLAMGLTLPQTYRYVLLPM
                     AFRIILPPLSSEFLNIIKNSSVALTIGLIELTAAARSMAEFSFQVFEAFTGATLIYII
                     INIVVVNGMRWLERRVSVPGFISMGQPAAAH"
     gene            2389..>2792
                     /locus_tag="VIY07_16110"
     CDS             2389..>2792
                     /locus_tag="VIY07_16110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453382.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6383315.1"
                     /translation="MFSTFDWNVIIRSLPYLFLDGMRFTIMLTLMATAGGIVIGTLLA
                     MARLSNIPGVSHVAGAYVNLIRSMPLVLVIFWFYFLVPYIGQWITGASRPIQVGAFLS
                     ALVTFTLFEAAYFAEIMRAGIQSIPRGQVAAA"
BASE COUNT          542 a          877 c          781 g          592 t
ORIGIN      
        1 acgcggtttc gcggccaatg cctacgttaa aaatctgcgc tccggcgaaa acaagatcgt
       61 cagccgatac gacgcgacat ttgctgccga tgatccctat cccgagctgc gcgcatcgcg
      121 ttcacccgac cccattcttg acgtggtcac gcgggcgtat ggcggcgcca tggcgtccta
      181 tgcgcgcaat gagctcggct tcaagacaga aatgacttat gccctgctcg cgagcgacgt
      241 tcattgggac tggcagggcg gccggctgca ggcgagcgcc gaagacgatt tacgaaccct
      301 gctggcgtac gattcttctt ttcgtttgct cattgcgcac ggctatgcgg acatgattac
      361 gccgtacgcc atgacgcgtt acatcctgga ccacatgcct tcgttcgatc cgccgggccg
      421 cgcccagctc aagctctatc gcggtgggca catgctttat cttgacccac tgtcccgcaa
      481 ggctttcagc gacgatgcgg cagcgttcta ccgcacggcg gaatagccgt ctttaaagat
      541 tgagccagtg ggattccgca ccgggcctat ggtaaggtcc ggctacgcca ccgcccggcg
      601 ccatgacggc gccggaccat cggatgtgca tggttcttac gggggttttg atgcgtttga
      661 aggcgataat tacgacggca gctgccatcg gcttgctctc cgggaccgca gtcgcgcagg
      721 acggcacgct gaagaagatc aaggataccg gcacgataac gatcggccac cgcgagtctt
      781 cggttccctt ctcctattac gacgacaagc agcaggtggt cggctatgcc atggatctct
      841 gcaacaggat cgtcgatgcg gtaaaggcaa acctcaagct caccaagctc gaggtcaagc
      901 tgcagccggt gacgtccgcc acccgcattc ctctgctggc aaatggcacc accgatctgg
      961 agtgcggctc aaccaccaac aatctcgagc ggcagaaaca gatttccttc accatcaccc
     1021 acttcgtgac ggccaatcgt ttcgtgtcga agaagtccgc caatctgaaa aagcttgaag
     1081 acctgaaggg caagaccgtg gtctcgacct cgggtaccac caacatcaag cagatcaccg
     1141 agctcaacac ggagaaaaac ctcggcctca atattcttcc ggccaaggac catgccgagg
     1201 cctttctgat ggttgagacc ggccgcgccg ccgccttcgt gatggacgat atcctgctct
     1261 acagccttgt cgcgggctcc aaggcgccaa aagactacca aatctccacc gatgccctgt
     1321 cagtcgagcc ttacggcatc atgctgcgca aggacgatcc ggccttcaag aaagtggtcg
     1381 atgacgccat gaccgccact tacaagagcg gcgatatcaa caatatctac gacaagtggt
     1441 tcctcaagcc gatcccgccc aaaagcgtcg atctcggtgt gccgatgagc gacgcattca
     1501 agaaggtcat cgccaagccg accgatagcg gcgatcccaa agactatcaa taacctccga
     1561 atagacgcta gactaagcgg cgcggcctca aggccgcgcc gcaattgcgt gaggggtgag
     1621 gtcgcggatg aactacaact ggaattgggg aatctttttc cagctttccc cggacggcac
     1681 ctacacctac ttgcagcttt tgctgttcgg cgccggctgg acgctggcaa cggcgcttct
     1741 cgcctgggcg atcgcgcttt cggtcggcgc ggtcatcgga gtgatccgca cgtcgccggt
     1801 cccgtggctg gttcggctcg gcaatgccta cgtcgagttg ttccgcaaca tccccctgct
     1861 ggtgcagatg ttcctgtggt acttcgtatt gccggaactt ttaccggagg cgattggcga
     1921 ctggctcaag cagtcggcga acgcgtcgtt ctacaatgcg gtaatctgtc ttggcctcta
     1981 tacgtcggcg cgcgtcgccg aacaggtcaa agccggaatt cttagcctgc gcagcgggca
     2041 aagcatggcg ggcctcgcga tgggtctcac gctgccgcag acctatcgct acgtgctgtt
     2101 gccgatggcg tttcgcatca tcctgccccc gctgagctcg gaatttctca acatcatcaa
     2161 gaattcctcg gtggcgctga ccatcggcct catcgagctc accgcggccg cacgatcgat
     2221 ggccgaattt tcctttcagg tgtttgaagc cttcactggc gcgaccctga tctacatcat
     2281 catcaacatc gttgtcgtga acggcatgcg ctggctcgaa cggcgggttt cggtgcccgg
     2341 cttcatcagc atgggccagc cggcagcggc acattgaggg gcggatcgat gttttccact
     2401 ttcgactgga acgtcatcat ccgctcgctg ccgtaccttt ttctcgacgg catgcgcttc
     2461 accatcatgt tgaccttgat ggcaaccgcc ggcggcatcg tcatcggcac gttgctggcg
     2521 atggcgcggc tctcgaacat tccgggcgtc tcccacgtcg cgggcgccta cgtcaacctg
     2581 atccgttcta tgccgctcgt tctcgtaatc ttctggttct actttctcgt gccctatatc
     2641 gggcaatgga tcaccggcgc gtcgcggccg atccaggtgg gcgcattcct ttcggcactc
     2701 gtgaccttca cgctgtttga ggccgcctat ttcgccgaga tcatgcgcgc cggcatccag
     2761 tcgatcccgc gcggccaggt ggcggcggcg ca
//
LOCUS       DATDHO010000825         1654 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_338975, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000825 DATDHO010000000
VERSION     DATDHO010000825.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338975"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..627)
                     /locus_tag="VIY07_16115"
     CDS             complement(<1..627)
                     /locus_tag="VIY07_16115"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383316.1"
                     /translation="MFKQQGKELLSQALITLWSHKFRSFLTVLGVVIGTATVIGVASL
                     LSGLEAGFKERMEQFGTNTAFLSRLGGGPRHSDLTEEERQRKPITLEDAIALSQLPSV
                     YAASPMLWPPGLPPTVKFRGNEVRAPQVRGVWAGYANTREVAIERGRFFTEVEDQHSI
                     EVCIIGSEIAQRLLAGYEPLDKEIQIGNKVFKVIGVLEQSKNIFGGAGS"
     gene            complement(632..>1654)
                     /locus_tag="VIY07_16120"
     CDS             complement(632..>1654)
                     /locus_tag="VIY07_16120"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383317.1"
                     /translation="IEPTFEDFILANRRNKDLTSADADYLRERMTLAQSIAVQGYASA
                     ELRSPNQKLTRVTVRGVSAEMINIDTTQPEFGRYINEGDDERRRNVALIGSEIANNLF
                     NRRDAVGREIKVNGLPFEVIGVAKGQGSFFGQSRDEFILIPLSTYQKMWGNRQSVNIS
                     IKAYNNGNLQDVQDQIRLLMRARHRLGYNEKDTFGLISADAINNFVQGLFGLIAAVAL
                     GVVSISLVVGGIVIMNIMLVTVTERTHEIGIRKSLGARRRDILMQFLVESTTLSLIGG
                     FIGLVIAYGISALLVRLTPIPAELPVWAAFLAILVSSGVGLIFGIYPAWKAARLDPIV
                     ALRSEG"
BASE COUNT          373 a          494 c          430 g          357 t
ORIGIN      
        1 agatcctgcc ccgccgaata tgttcttcga ttgctcgagc acgccgatca ctttaaaaac
       61 cttgttgccg atctgaatct ctttgtcgag cggttcatac cccgcgagca gcctctgagc
      121 aatttcgctg ccgatgatgc aaacctcgat ggaatgttgg tcttcgactt cagtgaaaaa
      181 acggcctctc tcaatggcaa cttcgcgcgt atttgcatag cccgcccaaa caccacgcac
      241 ctgtggcgca cgcacttcgt taccgcgaaa tttaacggtg ggaggcaacc ccggcggcca
      301 tagcatcggc gatgcggcgt agaccgacgg gagctggctc agcgcaattg cgtcttccag
      361 agtgataggt tttcgctggc gctcttcctc cgtcagatcg ctgtgacgcg gcccgcctcc
      421 cagacggctg agaaacgcgg tgttcgttcc gaactgctcc atccgctcct tgaacccggc
      481 ctcgagtccg ctcaagagcg atgccacacc gatgacagtg gcggtcccga tcaccacccc
      541 caggaccgtc agaaatgagc ggaacttgtg cgaccacaaa gtgatcagcg cctgtgataa
      601 taattctttc ccttgctgct taaacataaa atcagccttc cgaccgcaag gccacgatcg
      661 gatcgagcct cgccgctttc catgccgggt agatgccgaa aatcaagccc accccgctcg
      721 aaacgagaat cgccagaaat gccgcccaga ccggcagttc cgccggaatc ggggtcaacc
      781 tgacaagcaa cgctgaaatg ccgtaggcga taaccagccc gataaatccg ccgatcaatg
      841 agagagtcgt cgattcgacc agaaactgca tgaggatgtc gcggcggcgc gcgcccagac
      901 ttttgcggat cccgatctcg tgtgtccgct cggtcaccgt caccagcatg atgttcataa
      961 tgacgatgcc gccgaccacc agtgagatcg aaacaactcc cagcgcaacg gcggcgatca
     1021 gcccgaaaag accctgcaca aaattattta tcgcatcggc ggaaatcagg ccgaaggtgt
     1081 ctttttcgtt gtatccgagc cggtggcgag cgcgcatgag caagcggatt tgatcctgca
     1141 catcctgcag gttgccattg ttgtatgcct taatcgaaat attgacgctt tgacggttcc
     1201 cccacatttt ctggtatgtc gataggggaa tgaggataaa ttcgtcacgg gactggccga
     1261 aaaaagatcc ttgccccttc gccaccccga ttacctcgaa aggcaacccg ttgaccttga
     1321 tttcacgacc cacggcatcc cggcggttga atagattgtt ggcaatctca gaaccgatca
     1381 aggctacatt acggcgcctt tcgtcgtcac cctcattgat gtagcgcccg aattccggct
     1441 gcgtcgtgtc gatattgatc atctcggcgg acactccacg gaccgtgaca cgcgtcagtt
     1501 tttgattggg cgaccgcagc tcggcgctgg catagccttg cacagcgatg gactgggcga
     1561 gggtcattcg ttcacgcaga tagtcggcat cggcactagt caagtcttta ttgcggcggt
     1621 tggcaaggat gaaatcctca aaagtcggtt ctat
//
LOCUS       DATDHO010000826         2429 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_339011, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000826 DATDHO010000000
VERSION     DATDHO010000826.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339011"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..911
                     /locus_tag="VIY07_16125"
     CDS             <1..911
                     /locus_tag="VIY07_16125"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6383318.1"
                     /translation="SVCADDYPSRPIHVLTTSSAGGISDIFMRVLGEELNKRLGQPLI
                     IENRPGGSGNIASRACQDAQPDGYTICIINADPMIYNQYLFKNLSFDPDKLSPIINLF
                     HLIQVLVINSDLKAKTVDELIAVSKQKPGTLSYLSASIPCVVYMDSLKQEKGADWVRV
                     PFKGGGEATNAILGGSTPIGLLGLGNVMSQISADKMTALALVNNIRTPLLPNVPTLED
                     LGYKGAPSQTWYGLFAPPGTPKAIIDRIAAEVTRVFADKDFVEKYVISRGQVPAINTP
                     EQFAAQIKADRAAAQEVVKASGVQPQ"
     gene            complement(1048..1851)
                     /locus_tag="VIY07_16130"
     CDS             complement(1048..1851)
                     /locus_tag="VIY07_16130"
                     /inference="COORDINATES: protein motif:HMM:NF025389.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4239 domain-containing protein"
                     /protein_id="HEY6383319.1"
                     /translation="MPVLTTNLFLTTTPLWVAAFVLLVPTTILAMCGPMIVRRYVPLE
                     RLRDNNEVAGFKFATVGVVYAVLLAFAILVVWERFNQADNEVASEAAAAATVFRLTQG
                     LDTDHGAAVRKATTDYLKEAVAKDWPAMGEGTSSRQVTIALNRIYDAVLKFHRVGSFE
                     GVIVAEILRNVDRISQMRRQRLVAASGIVPGVIWAVLFAGAFVTIGFTFFFGTANLRA
                     QMTMSGALALLIFGGLLTVVAIDHPFAGAVKVGPEALIAVIEDFGDKPR"
     gene            complement(2167..>2429)
                     /locus_tag="VIY07_16135"
     CDS             complement(2167..>2429)
                     /locus_tag="VIY07_16135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383320.1"
                     /translation="RAALARGEETVPVRDAAAFKVNEKDRAWVDALATPQPMGTMTEK
                     LALTGARERIPKKTYIRASGYPNVSFDKAYAAREGPPNLAHV"
BASE COUNT          493 a          771 c          729 g          436 t
ORIGIN      
        1 catcggtttg cgccgacgac tacccgagcc gccctatcca cgtgctcacc acctcgagcg
       61 ccggcggcat cagcgacatt ttcatgcgcg ttctgggcga agaattgaac aagcgactcg
      121 gccagccgct cattatcgag aaccggcccg gcggatccgg caacatcgcg tcgcgcgcct
      181 gccaggatgc gcagccggac ggctacacga tctgcatcat caatgccgat ccgatgatct
      241 ataaccaata cctgttcaag aacctgtcgt tcgatcccga caagctctcg ccgatcatca
      301 atctgttcca cctgatccag gtgctggtga tcaattccga tctcaaggcg aagacggtgg
      361 acgagctcat cgctgtgtcg aagcagaagc cgggcacgct gtcctatctc agtgcttcga
      421 tcccgtgcgt tgtctacatg gacagcctca agcaggagaa gggcgccgac tgggtgcgcg
      481 tgccattcaa gggcggcggc gaggcgacca atgccattct cggcggctcg accccgatcg
      541 gcctgctcgg tcttggcaac gtcatgtcgc agatcagcgc ggacaagatg acggcgctgg
      601 cgctggtcaa caacatccgc acgccgctgc tgccgaacgt gccgacgctg gaggatcttg
      661 gctacaaggg tgcgccgtcg cagacctggt acggattgtt cgcgccgccg ggcacgccga
      721 aagcgatcat cgaccggatc gcggccgaag tgacgcgcgt gttcgccgac aaggattttg
      781 tcgagaaata tgtgatcagc cgcggccagg ttccggcgat caacacgccg gagcagttcg
      841 ctgcccagat caaggccgat cgcgcggccg cgcaggaggt cgtgaaagcg tcgggggtgc
      901 agccgcagta gctgatcacg ccgacaaaaa tccccagtcc gttcatcccc gcgtaggcgg
      961 ggatccagca ctttggacag aagaactggg tccccgcttg cgcgggggcg aacggcttca
     1021 ccgaggtgtc ggcaccagca gcctgtctca gcgcggcttg tcgccgaagt cctcgatcac
     1081 cgcgatcagg gcctccgggc cgaccttcac ggcgccggca aacggatgat cgatggcgac
     1141 aacggtcaaa aggccgccga agatcagaag cgccagcgcg cccgacatag tcatttgcgc
     1201 tcgcaagttg gcggtgccga aaaagaaggt aaagccaatg gtgacgaacg cgccggcgaa
     1261 caacaccgcc cagatgactc ccggcacgat tccgcttgcc gccaccagac gttggcgccg
     1321 catttggctg atgcgatcga cgttgcgcag gatttccgcc acgatcacac cctcaaaact
     1381 gccgacccgg tggaacttga gcacggcgtc atagatcctg ttcaacgcta tcgtgacctg
     1441 gcggctcgat gtcccttcgc ccattgccgg ccagtctttt gcgacggcct ccttcaaata
     1501 gtccgttgtc gccttgcgga ccgccgcgcc atggtctgtg tccagtcctt gcgtcaggcg
     1561 aaaaacggtt gctgccgcag ccgcttcgct ggccacttcg ttgtccgcct gattaaagcg
     1621 ttcccagacg acgaggatcg cgaaagcgag cagcactgca taaaccaccc ccacggtggc
     1681 aaatttgaac ccggccactt cattgttgtc gcgcaaccgc tcgagcggga catagcgacg
     1741 aacgatcatc ggcccgcaca tcgccaatat ggtcgtcgga acaagcagga cgaaagcagc
     1801 aacccaaagc ggtgttgtgg tcaggaagag attggtggtc aggaccggca tgcggaggcc
     1861 cctttttccg actgccatca agatagacga aataaccggg cgattggact tgtctgcgac
     1921 gaagcgaccc gttcatcccc gcgtaagcgg gatccagcac taggcagaaa actggatgcc
     1981 cgcgttcgcg ggcacgaacg gggaattggg acaagctcga ccatcacaaa taccggagca
     2041 ccgattggaa caggaccggt agtgacgtcg tgtcgtggct ccccagttag gcgtcacgcc
     2101 acttcgagca gaatctcggt gagcttgtcc ggcgcatcga tcatcacgtc atggccgcac
     2161 ggcacttcat acgtgcgcca ggttgggtgg gccttcacgc gctgcgtagg ccttgtcgaa
     2221 tgaaacattc ggatagcctg acgcgcggat gtaggtcttc ttcggaatgc gctcgcgcgc
     2281 ccccgtgagc gccagctttt ctgtcatagt gcccatcggc tgcggcgtgg cgagggcgtc
     2341 gacccaggcg cgatccttct cgttgacctt gaacgccgca gcatcgcgca ccggcaccgt
     2401 ctcttccccg cgcgcgaggg ctgcacgga
//
LOCUS       DATDHO010000827         2087 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_191105, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000827 DATDHO010000000
VERSION     DATDHO010000827.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191105"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1465)
                     /locus_tag="VIY07_16140"
     CDS             complement(<1..1465)
                     /locus_tag="VIY07_16140"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEY6383321.1"
                     /translation="MPVVVYRLLVLGLTTLAVVAPLSLVVYQSFLTAPFFDPSAKFGL
                     LAYSFVFDDPDFWQAFWTTVVVAAGMAAIAVPLGALLAFLMVRTDVPGRDYLEPLILI
                     PIFVSTVVIAFGYVVAIGPVGIFSTLAKDILGFVPWNLYSLLALIVIAGLTHVPHVYL
                     YSAAALRGLGTDLEEAARVSGANPFRVAVNVSLPMILPAILFAGVLVFFLGFELFGLP
                     LVLGDPQDLLVLSTYLYKLTNKLGVPSYQLMAVVVVAIIAITAPLVFMQRLLLRQAQR
                     YVSVRGKGLKTQPLRLRGWRWAAFGGIVFWLFITVVVPLSGITLRSFVVTWGEGVKLL
                     DVLTLDHYRELSDYPNVIRGILNTLGIGVIGGAIAVGCYTAIALAVHRWNSGWTRLVD
                     YLVMVPRAMPGLVAGLALLWVFLFVPFLSPLKSTMVSIWLAYTIVWLAYGMRLVSGTL
                     LQVGPELEEAARTAGASDLRVKRDVTVPLIKYGMLASW"
     gene            complement(1579..>2087)
                     /locus_tag="VIY07_16145"
     CDS             complement(1579..>2087)
                     /locus_tag="VIY07_16145"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383322.1"
                     /translation="CNEDIKDWPQAWDLFKAMGKAQAKLYTSAGAMMERVTSGEHLIA
                     YGVFGSYALGRAKKDPNLGIILPKDYTMVTSRVAFVSKKARNPNAGKLFLDYILSKQG
                     QDIIANKSDLYSLRADVDGEATIKGVTQLVGDKARPVPIDQTLLDNLDQAKRLAFLSK
                     WQQAKKGQ"
BASE COUNT          495 a          605 c          635 g          352 t
ORIGIN      
        1 gccagctggc gagcatgccg tatttgatca gcggcacggt gacgtcacgc ttgacgcgaa
       61 ggtcgctggc gccggcggtg cgcgcggcct cctccagctc cggtccgact tgcagtagcg
      121 tgccggaaac gagccgcatc ccgtaggcca gccaaacgat tgtgtaggca agccagatcg
      181 acaccatcgt cgatttcaac ggggacagaa acggcacaaa cagaaagacc cataacaggg
      241 caagaccggc gacgaggccc ggcatcgcgc gcggcaccat cacgaggtag tcgacaagcc
      301 gcgtccaccc ggaattccat ctgtgcacag caagggcgat tgcggtgtag cagccgacgg
      361 caattgcgcc gccgatgaca ccgatcccaa gcgtattcag gatgccgcgg atcacatttg
      421 gatagtcgct cagttcgcga tagtgatcga gcgtaagcac gtccagaagc ttcacgcctt
      481 cgccccaggt caccacgaac gaacgcagcg tgatgccgga cagcggcacc acgactgtga
      541 tgaaaagcca gaatacgatg ccgccgaatg cggcccagcg ccagccgcgg agccggagcg
      601 gctgggtctt caggcctttg ccgcgaaccg agacataacg ctgcgcctgg cgcaacagca
      661 gacgctgcat gaaaaccagc ggcgcggtga tggcaatgat cgcaacaacg acgacagcca
      721 tgagctggta ggatggcacg ccgagcttgt tggtgagttt gtagaggtat gtggacagga
      781 cgagtaggtc ttgcgggtcg cccaaaacca ggggcagccc gaacagttca aagccgagga
      841 agaatacgag caccccggca aacaggatgg caggcaggat catcggcagg ctgacattca
      901 ccgccacacg gaatgggttt gcgcccgaga cccgcgcggc ttcttccagg tcggtgccga
      961 ggccgcgcag tgcggcggca ctgtaaaggt agacgtgcgg gacatgggta agccccgcaa
     1021 tcacaatcaa ggcaagcagc gaataaaggt tccacggcac gaacccgagg atgtccttgg
     1081 cgagcgtcga aaaaattcca accggaccga ttgccaccac gtaaccgaac gcgatcacca
     1141 ctgtcgagac gaagattgga atcaagataa gcggttcgag ataatctcgg ccgggcacgt
     1201 cggtgcgcac catcagaaaa gcgagcagag cgccgagagg cacggcgatc gcagccatac
     1261 cagcggcgac tacaacggtc gtccagaatg cctgccaaaa atcggggtcg tcaaagacga
     1321 aagaatacgc aagcaaacca aattttgcgg atggatcaaa aaaaggagca gtgagaaagc
     1381 tctggtagac cacgagggat agcggcgcca ccacggccag ggtggtcagg ccaagaacga
     1441 gcaaacggta tacgacaacg ggcatctgtc ctcgtaattt cgggcgcgcg gtcagcgcgg
     1501 agccgaaatc cagccgtggg tattgtcttt ccgattccgc gccggtttcg agcggcccgg
     1561 aatgccagac tatcgtcctt actgtccctt cttcgcctgt tgccacttgg acagaaaagc
     1621 gagtcgcttg gcctggtcca gattgtcgag cagcgtctga tcgatgggca ccggccgcgc
     1681 cttgtcgccg accagttgtg tgaccccttt gattgtcgcc tcgccatcga catcggcacg
     1741 cagcgaatag agatcggact tgttggcgat gatgtcctgt ccctgcttgg acaggatata
     1801 gtcaaggaaa agcttgccgg cgttaggatt cctcgccttc ttggagacga atgcaacgcg
     1861 cgaggttacc atcgtgtagt ccttcggcag aatgatgccg aggttgggat ctttcttcgc
     1921 gcgtccgagc gcataagaac cgaaaacgcc ataggcaatc aggtgctcgc cggaagtaac
     1981 gcgctccatc atcgcgcccg cgctcgtata gagcttggcc tgcgccttgc ccatggcttt
     2041 gaataagtcc caggcctgtg gccaatcctt gatgtcctcg ttgcaga
//
LOCUS       DATDHO010000828         5006 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_339043, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000828 DATDHO010000000
VERSION     DATDHO010000828.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5006)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5006)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5006
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339043"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..209
                     /locus_tag="VIY07_16150"
     CDS             <1..209
                     /locus_tag="VIY07_16150"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Rid family hydrolase"
                     /protein_id="HEY6383323.1"
                     /translation="VLALEEGGASLKDVVKVTIYICNPHDVPKARAILQEYFGNDPPA
                     STLCVLRGLANPNFLLEIEAIAAL"
     gene            complement(405..2579)
                     /locus_tag="VIY07_16155"
     CDS             complement(405..2579)
                     /locus_tag="VIY07_16155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HEY6383324.1"
                     /translation="MKAAVQAAIADGPFYIPATASPSRPRRTLKHGDTFAVVDSHGDI
                     GASAGAQDGIFHADTRYLSRFELLLNGMQPLLLGSNLRDDNSVLTIDLTNPDIFFNGQ
                     LALPKDTLHIVRTMFLWRGCAYQRFDVRNHGDVPVMFSLSLTFDNDFADLFEVRGMHR
                     ARRGKSETLCHPETGRVEIVYDGLDGRRRRSVLAFEPPPAVLHNNIGSYRLDLMPGER
                     RTVCLRVECSGDVQSRYRNFVRSMMAAAHELKSATRQAAAAATSNEILNQMLCRSVAD
                     LFMLMTQTPQGPYPYAGIPWYSTTFGRDGIITAIQMLWCDPTIAKGVLRRLAAYQAKE
                     TDPNRDAQPGKILHEMRAGEMAALGEIPFGLYYGSVDSTPLFVLLVGLYVERTGDIAT
                     LQELWPNVESALGWIDAYGDIDGDGFVEYQRATERGLANQGWKDSQDAVFHADGRLAE
                     GPIALAEVQGYVYAAKLYAARCARRLGEETRARDLELQAERLRERFDSAFWCDSIGTY
                     TIALDGNKLPCLVRTSNAGQVLFSGIAKPERAAMVAKGLLEPRFFSGWGIRTVALDEP
                     RYNPMSYHNGSIWPHDNSLIAIGLRHYGFTDAVDRIFAGMLHAASYMEFQRLPELFCG
                     FRRRRNRGPTLYPVACSPQAWAAATPFALLGTLLGLEFAPEAKEIRLRNPHLPPFIEE
                     LTIKGLRLGDSAVDLCLHGRGDDISLRILRNDGNIRVAAIYY"
     gene            complement(2597..3739)
                     /locus_tag="VIY07_16160"
     CDS             complement(2597..3739)
                     /locus_tag="VIY07_16160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEY6383325.1"
                     /translation="MKIAQIAPLIESVPPRTYGGTERVVSYLTEELVRLGHDVTLFAS
                     GDSITSARLIPCVPTALRLDPHILDPIPYYMLMLDRVREFADEFDILHFHIDQFHFPL
                     FRPRAGRTVTTLHGRQDLPDLRPLYFGFSDMPLVSISDAQRRPIANANFAATVHHGLP
                     IDLHRPTFNPRGGYLAFLGRISPEKGVDRAIKVARTLGIPFKIAAKVDRVDEAYFREH
                     IAPLLKAPGVEFIGEINEQEKTEFLGQALALMFLIDWPEPFGLSMIEAMACGTPVLAF
                     RRGAVEEVLESGITGHVVDTLEEAIAALPRVINLDRRTVRRQFDMRFTSTRMAKDYAK
                     VYKSLLDQMSLPAKIEIVPVSRVPAEVEPVPTAPAQYAIEPNEPAI"
     gene            complement(4098..4367)
                     /locus_tag="VIY07_16165"
     CDS             complement(4098..4367)
                     /locus_tag="VIY07_16165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HEY6383326.1"
                     /translation="MHILWLILIGFVAGVIAKFLHPGSSNEPSGFILTTLLGIAGSFV
                     ATYLGQALGWYQAGEGAGLIGAVVGAIIVLVVWGLFTPRQPTNVA"
     gene            4403..4960
                     /locus_tag="VIY07_16170"
     CDS             4403..4960
                     /locus_tag="VIY07_16170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD domain-containing protein"
                     /protein_id="HEY6383327.1"
                     /translation="MIQFHFADEPIAGRSRFHAKRRPNEGYFSRHRRGPQWLQNAQST
                     GPALYRGQKASAHIQEAGVPDPCKGRSHSDWRHDPAGLFSARYWRIRYADVVPDLPKR
                     SRGDEICAWLRKHPEVKRYAVIDDDDDQLDDLPLFQPSSSIGLTQKIANGVSRYLQGK
                     TDRDMRAGPITRTLENLRTALKRVV"
BASE COUNT         1066 a         1457 c         1475 g         1008 t
ORIGIN      
        1 tggttctggc tctggaggaa ggcggtgcca gcctgaagga tgtggttaag gtgacaatct
       61 atatttgcaa tccgcacgat gtgccgaagg cccgcgcgat tctccaggaa tattttggca
      121 acgacccgcc ggccagcacg ctttgtgtgc tgcgcggact tgcgaatccg aatttcctac
      181 tggaaatcga agccatcgcg gcgctgtaac cggcttcccg aagaaagggc caaggcgtcg
      241 cgatgctctt ggccctaaca gccacgcggc ttggggggca ccaggggact cgcgcggcca
      301 tctggtaaac tcaatcgcca aagacctgtt cctgccacgc attaactctt tggcgataac
      361 cctgcccgcg tcatgaatgg aatgccgccc gacaaccggc ttgactaata gtagatggcc
      421 gccacgcgga tattgccatc attgcgcaag atccgcaggg aaatgtcgtc gcctcgccca
      481 tgtaggcaca ggtcgactgc cgaatcgccg agtcgcaatc ccttgattgt cagctcttcg
      541 ataaacggtg gcaaatgcgg gtttcgcaat ctgatctcct tggcctcggg agcgaattcc
      601 agtccgagca aagtccccag caacgcaaag ggtgtggccg ctgcccatgc ctggggcgag
      661 cacgcaaccg ggtaaagcgt gggcccgcga ttgcgacgcc gacgaaagcc gcagaagagt
      721 tcgggaaggc gctggaattc catataggaa gcagcgtgca gcattccggc gaatatgcga
      781 tcgactgcgt cggtgaaccc ataatgccgg agtccgatcg cgatcaatga attgtcgtgt
      841 ggccagattg agccgttgtg ataggacatc ggattgtagc gtggctcgtc gagcgccacg
      901 gtgcgaatgc cccagcccga gaaaaagcgg ggctccaaaa gccccttcgc gaccatggcg
      961 gcgcgttcgg gtttcgcgat tccggaaaac agcacctggc ccgcattgga tgtgcgcacc
     1021 aggcagggga gtttgtttcc gtcgagtgcg atcgtatagg tgccgatgct gtcacaccag
     1081 aaggcgctgt cgaagcgttc gcgcagacgc tctgcctgga gttcgaggtc acgggcgcgt
     1141 gtctcctcgc caagtcgtcg cgcacagcgc gctgcataca gcttggcggc atagacgtag
     1201 ccctgaacct cggcgagtgc gatcggtcct tcggctaacc ggccgtcggc atgaaaaacg
     1261 gcatcctgcg aatctttcca gccctggttg gcgaggcccc gctccgtcgc gcgctgatat
     1321 tcgacaaagc catcgccatc gatgtctccg taagcgtcga tccagccaag cgcggactcc
     1381 acgtttggcc acagctcctg cagtgtggcg atgtcgcccg tgcgctcgac gtaaagtccg
     1441 acaagcagga caaacagcgg cgttgaatcc acgctgccgt agtaaagccc aaacgggatc
     1501 tcgcccagcg cggccatctc gccggctcgc atctcatgta gaatcttgcc cggttgagcg
     1561 tcgcgattcg gatcagtctc tttggcctga tatgcggcca ggcgcctgag cacgcccttt
     1621 gcaatcgtcg gatcgcacca cagcatctga atcgccgtga tgattccatc acgtccaaac
     1681 gtcgtggagt accatgggat ccctgcatat ggatacgggc cctgcggggt ctgagtcatc
     1741 agcatgaaaa gatcagccac ggagcggcac aacatctggt tcaggatctc gttcgaggtg
     1801 gctgcggctg ccgcctggcg tgtcgcagat ttcaactcgt gcgccgctgc catcatgctg
     1861 cgcacgaaat tccggtatcg gctttgaacg tcgccgctgc attcgaccct gagacagacg
     1921 gttcgacgct cccctggcat caggtcaagc cgatatgagc cgatattatt gtgcagaacg
     1981 gccggagggg gttcgaaggc cagcacactg cggcggcgtc gaccgtcaag accatcgtat
     2041 acgatctcca cgcggccggt ttcgggatgg caaagcgttt ccgatttccc gcgtctagcg
     2101 cgatgcatgc cgcgcacttc aaacaggtcg gcgaaatcgt tgtcgaaagt cagcgacagg
     2161 ctgaacatga ccggcacatc gccgtggttg cggacgtcga accgttgata agcacaaccc
     2221 cgccacagga acatcgtacg gacgatgtgc agagtgtcct tcggcagcgc cagttgtccg
     2281 ttaaaaaaga tgtccggatt tgtcagatcg atcgtaagca cggaattgtc gtcgcgcagg
     2341 ttcgagccga gcagcaacgg ctgcatgccg ttgagcaaga gctcaaagcg cgaaagatat
     2401 cgcgtgtcgg cgtggaatat gccgtcctgt gctccagccg atgccccgat atcaccgtgg
     2461 ctgtcgacga cggcaaacgt atcgccatgt ttgagcgttc gacgtggcct cgaaggcgac
     2521 gccgtcgctg gaatgtagaa aggtccatcg gcgatggcag cttgtacggc tgctttcatc
     2581 cgcgacgcgg caatcatcaa atggcaggct cgttcggctc gatggcatat tgcgcagggg
     2641 ccgtgggcac gggttcaacc tcggctggaa cccgcgagac gggcacgatt tcgatcttcg
     2701 ctggaaggct catctggtcc agcagcgatt tatacacttt ggcgtagtcc tttgccatgc
     2761 gcgtactggt gaaccgcata tcgaattgtc gacggacggt gcgccggtca aggtttatca
     2821 ctcggggcag ggcggcaatc gcttcctcga gggtatcgac aacgtgcccg gtgatgccac
     2881 tttccagaac ttcttcgacc gcgccgcgcc ggaacgccag cacgggtgtg ccgcaggcca
     2941 tagcctcgat catggataac ccaaacggtt ccggccaatc gatcaggaac atcagcgcca
     3001 gggcctggcc gagaaattcg gttttttcct gctcgttgat ttcgccgatg aactccacgc
     3061 caggagcctt gagcaacggg gcaatgtgct cgcggaaata agcctcatcc accctgtcga
     3121 ccttcgctgc aatcttgaat ggaattccaa gcgtccgggc tactttgatc gcacggtcga
     3181 cgcctttttc cggcgaaatg cgcccgagga atgcgaggta accgccgcgc ggattgaagg
     3241 tcggccgatg tagatcaatc ggcagcccat gatgcaccgt tgccgcaaaa ttggcattcg
     3301 cgatcggcct ccgctgtgcg tccgagattg acacgagcgg catgtcgctg aaaccgaaat
     3361 acagcggcct gaggtcggga agatcctgtc ggccgtgcag agttgtcaca gtgcgaccgg
     3421 ctcgcggccg aaacagaggg aaatgaaatt gatcgatatg gaaatggaga atgtcgaact
     3481 cgtcggcgaa ttcgcggacg cgatcgagca taagcatata atagggaatt ggatccagta
     3541 tgtgcggatc gagccgcaac gcggtcggta cacatggtat gaggcgcgcc gaggtgatgg
     3601 agtcgccact cgcgaaaagg gtcacatcgt gaccaagccg aacgagctct tcggtgagat
     3661 aagagactac cctttcagtt ccaccatacg ttcgcggcgg cacgctctcg atgagcggtg
     3721 cgatctgggc gatcttcacg aaggactcca ctagcctcga gaaccaaacg ttggccgtgg
     3781 acgacggttc ccgaaaaccg ccggacggcc ttcagaaact tccaattcta acagatttgt
     3841 tcaaacggag gaataattca ggacgaaatc ggctcgatct gttttgacga caacttcacg
     3901 gtctgcttgg cgccgcagcg tgtacacttg tactcccgct tcgattgcgt gcctttgtcc
     3961 gacaaccggg tgtctacacg cagcaccgac atttgctgcc cacaacgagg acatgttggc
     4021 gcatcccgtt caaacatctc gtcgggcggg accttcttat cctcgtgaag aaaggttgaa
     4081 gtcattttcg tcttccacta ggcgacgttg gtgggctgcc ggggcgtaaa aagcccccag
     4141 accacgagta cgatgatggc ccctaccacg gcgccgatta gccctgcccc ttcaccggcc
     4201 tgataccagc ccagcgcctg tcccagatag gtggcgacga aagagccggc gatgcccaga
     4261 agcgtcgtga ggatgaaacc ggatggctcg ttcgatgagc ccgggtgaag gaacttggcg
     4321 atcactccag cgacgaagcc aataagaata agccacagga tgtgcatggt tcggctcctg
     4381 attttcgaag aacctttgcg gaatgattca gttccatttt gctgacgaac cgattgccgg
     4441 ccggtcgcgt ttccatgcaa aacggcgtcc taatgagggt tatttttctc gacatcgacg
     4501 gggtcctcaa tggctccaaa acgcccaatc cacgggacct gccctatatc gtggacagaa
     4561 ggcttctgcg cacattcagg aagctggtgt tccggacccg tgcaaaggtc gttctcattc
     4621 ggattggcgg cacgaccccg ctggcctgtt cagcgcgcgc tactggcgca tccgatatgc
     4681 agacgttgtc cctgatttgc caaagcgctc ccgcggggat gagatctgcg cctggctgag
     4741 aaagcacccc gaggtcaagc ggtacgcagt cattgacgac gatgacgatc agctcgacga
     4801 tttgccgctt ttccagccct ccagttcgat cggcctgacc caaaaaatag ccaacggtgt
     4861 ctcccgatac ctacaaggca agaccgacag ggatatgcgt gccggtccta tcacccgcac
     4921 ccttgagaac ttgcgcaccg cccttaaacg tgtggtgtga cgcggtcgcg tcggcgccgg
     4981 ttaggtcacg ccgttgaaat caggtc
//
LOCUS       DATDHO010000829         1916 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_87172, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000829 DATDHO010000000
VERSION     DATDHO010000829.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1916)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1916)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1916
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_87172"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..144
                     /locus_tag="VIY07_16175"
     CDS             <1..144
                     /locus_tag="VIY07_16175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015915048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HEY6383328.1"
                     /translation="LAGCTEAEIATITGHSLRDVRSILDAHYLHRDPALAESAIRKLE
                     KRT"
     gene            complement(227..300)
                     /locus_tag="VIY07_16180"
     tRNA            complement(227..300)
                     /locus_tag="VIY07_16180"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(266..268),aa:Gln,seq:ctg)
     gene            complement(393..1604)
                     /locus_tag="VIY07_16185"
     CDS             complement(393..1604)
                     /locus_tag="VIY07_16185"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383329.1"
                     /translation="MSQATDTVGIARPSYVRVVGAVSAAHFVSHYYLILLAPLMPFVR
                     DEYGVSYTEIGLAFAVFNIVSAVGQTPAGFLVDRIGARALLVAGLLTGAGAFILAGVI
                     DSFWMLVAMFALAGVGNTVYHPADYALLSQHVPGDRIGQAFSIHTFAGMLGSAVAPAT
                     LLLMQSQWGWRGAFVGAGVLGIATAAVLLAMRENSIVQHKPAANRPDAGGATSGWRLL
                     LSAPILLNLVFFALLAIISAGLYNYSVVALGALYGTPVTTANAALSGNLLLSAIGVLL
                     GGLLVGRTTRHAMVATIGLVVMALFTVLIAEIDLGAFALIAAMSLIGLFSGVIMPSRD
                     MIVREITPPGSFGKVFGFVTTGFNIGGIVAPLIFGAIMDHGSPRLVFLAVAAFCMIAV
                     STVGIGPRRQT"
BASE COUNT          449 a          583 c          587 g          297 t
ORIGIN      
        1 cttgccggat gtacggaggc ggagattgca actatcaccg gccacagttt gcgcgatgtg
       61 cgctccatcc tcgacgcgca ctatctgcac cgtgaccctg cgcttgctga gagtgcaatc
      121 aggaagctcg aaaagagaac gtgagggcaa caaattctcc caactgagcg cccaactggt
      181 cgacgatggt ctacgagaaa ggggacgaaa gacgcgcaaa atcaaatggc tggggaacta
      241 ggattcgaac ctagattctc ggagtcagag tccgatgttc taccgttgaa ctattcccca
      301 acgggccggg cgcgggtcgg cggcatccgg atggccctga catggggcaa tttggcaaat
      361 ttgacaagtc cgtaagccgc gccgcggcgg catcaggtct ggcgccgggg cccaatcccg
      421 accgtcgaca ccgcgatcat gcaaaaagcc gctacggcga ggaaaaccag ccgcgggctg
      481 ccgtggtcca tgatcgctcc gaaaatgagc ggggcgacga tgccgccgat attgaagcct
      541 gtggtcacaa agccgaacac cttgccgaac gagccgggcg gcgtgatctc gcgcacgatc
      601 atgtcgcgcg atggcatgat cacaccggag aacaggccga ttagcgacat cgccgcgatc
      661 agcgcgaacg cgccgaggtc gatctcggca atcagcacgg taaagagggc catcacgaca
      721 agcccgatgg tcgcgaccat cgcatgccgc gtggttcgac ccacaagcag gccgcccagc
      781 aacacgccaa tcgccgacag cagcaaattg ccggatagcg cggcattcgc cgtggtgacc
      841 ggcgtgccgt agagcgcgcc cagcgcaacg acggaatagt tgtaaagccc cgcgctgatt
      901 atcgcgagga gggcgaagaa gaccaggttg agcaggatcg gtgctgacag cagcaagcgc
      961 cagccgctcg ttgcaccacc cgcgtcgggg cggttcgcgg caggtttgtg ctgaacaatg
     1021 gaattctcgc gcatcgccag gagcacggcc gcggttgcga tgcccagcac gccggcgccg
     1081 acgaacgcgc cgcgccagcc ccattgcgac tgcatgagca gcaaggtcgc aggcgcgacc
     1141 gccgagccca gcatgccggc gaatgtgtgg atcgagaagg cctgcccgat gcgatcgcca
     1201 ggcacatgtt gcgacagcag cgcatagtcg gccgggtgat aaaccgtgtt gcccacgccg
     1261 gcgagcgcga acatcgcaac cagcatccag aatgaatcga taacgccggc gaggatgaag
     1321 gcgccggcgc cggtcagaag gcctgccacc agcagcgcgc gcgcgccgat ccggtcgacg
     1381 agaaatcctg ccggcgtctg gcccacggcc gaaacgatgt tgaacacggc aaaggcgagc
     1441 ccgatctcgg tatagctcac gccgtactca tcacggacaa agggcatgag gggcgcgagc
     1501 agaatgaggt aataatgcga aacgaaatgc gcggcactca ccgcaccgac cacccgaacg
     1561 taggacggcc gggcgatgcc gacagtatca gtcgcttggc tcatgctcgc gcaaactcca
     1621 taaagccgcg gactatgccc cggcgggcgt taccaatcca atgcatttgc agggggctgc
     1681 ctatgtcggc gcggtatacg gcggcgacgc ctagaaccgc ataaaaatcg gcctcgaaca
     1741 agcatctgtg aagtgtcgaa tgtgggctta catcaacaaa cagactggtt catctatcca
     1801 cattaaccgc tgattttgct tgcaactgcg cctccatttg ctatcgcttg gcaacatttg
     1861 gcaacactga agcacaccac ttttgttgcc aagacgttgc caaagggatg cacaat
//
LOCUS       DATDHO010000830         2605 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_238595, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000830 DATDHO010000000
VERSION     DATDHO010000830.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2605
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_238595"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /locus_tag="VIY07_16190"
     CDS             <1..991
                     /locus_tag="VIY07_16190"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HEY6383330.1"
                     /translation="TTLFLDGAPRFKPEHIALFDDVIGCLIEEIEAKALAELARRIAP
                     VPNAPAGVVNTLARNDDIAVAGPVLEQARLSDPDLMYIAETKSQAHLLAMSTRLGISE
                     ALADILVERGDGEVARSIANNRHAQLSDHAFVKLVKRADQDGLLAEKVGMRTDIPPRL
                     FRQLLIRASEVVQKRLLAKAKPETQVEIRRVLAQVTDEVAAKAAPRNYASALAAVRAM
                     HKQRKLGESDIAEFARTGKYEETIAALATLCAVPVEVVDRLMNGDRADPVLILARAAG
                     FGWTTVKAILNARPGAKPSPQTLDVARENFERLTATTAQRVVRFWQVRQGTGE"
     gene            complement(992..1540)
                     /locus_tag="VIY07_16195"
     CDS             complement(992..1540)
                     /locus_tag="VIY07_16195"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: protein motif:HMM:NF014447.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanine(46)-N(7))-methyltransferase TrmB"
                     /protein_id="HEY6383331.1"
                     /translation="MLFAVPVDDVRLEIGFGGSEHLIAQATAHPRTGFIGTDAFVNAV
                     GKALVAIEDGALPNIRLHFGDASELLDWLTDASLSRIDLLYPDPWPKRRHWKRRFIQD
                     DTLKRLARILRKGGELRFATDISDYAVYALARVMRSPDFVWSAECADDWRKPWRDFAG
                     TRYEAKARREGRQPAYFIFRRV"
     gene            complement(1835..>2605)
                     /gene="metK"
                     /locus_tag="VIY07_16200"
     CDS             complement(1835..>2605)
                     /gene="metK"
                     /locus_tag="VIY07_16200"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEY6383332.1"
                     /translation="PIYFAHKILKVLSEKRRNGQLYDLQPDSKSQVTIRYVDGKPVGC
                     TKVVVSTQHNAQSRNGKNYTPGLIKEMITDAVESALPKGWMPKKPSDFLVNPTGNFVI
                     GGPDGDCGLTGRKIIVDTYGGYAPHGGGAFSGKDPTKVDRSAAYAARYLAKNVVAAGL
                     ADRCTIQVAYAIGVADPMSVLVDTHGTGKVEEKKLEKILPELFRLTPTNIRRTLKLNR
                     PIYKRTAAYGHFGRAPEKDGGFSWEKTDLAPAIRSAVK"
BASE COUNT          499 a          803 c          811 g          492 t
ORIGIN      
        1 taccaccttg ttcctggatg gcgctccgag gttcaagcca gaacacatcg ccctgtttga
       61 cgatgtcatc ggctgcctga ttgaagaaat cgaagccaag gcgttggccg aacttgcgcg
      121 ccggatcgcc ccggtaccca atgcaccagc cggggttgtc aatacccttg ccaggaacga
      181 tgacatcgcc gtcgccgggc cggtcctcga gcaagcaagg ctcagcgatc cagacctcat
      241 gtacatcgcc gaaaccaaaa gtcaggcgca cctgctcgca atgtcgactc gccttgggat
      301 cagcgaggcg ctggcggaca ttctggtcga gcgcggcgac ggggaagtag cgcgctctat
      361 agccaacaac aggcatgcac agctgtcgga ccatgcattc gtcaagctgg tgaagcgcgc
      421 cgatcaggac gggctgctgg cagagaaagt tggaatgcgc acggacattc cgcctcggct
      481 ctttcgtcag ctgctgatcc gggccagcga agtcgtgcag aaacgactgc tcgccaaagc
      541 gaagccggaa acccaggtcg aaatccggcg cgttcttgcg caggtcaccg atgaggttgc
      601 cgcgaaggcc gcgccgcgca actacgcgtc tgcgcttgca gcggtgcgcg ccatgcacaa
      661 acagcgcaag cttggcgaaa gcgacatcgc tgaattcgcc aggactggca aatacgagga
      721 gacgatcgcg gcgttggcaa cgctatgcgc tgttcccgtc gaggtcgtgg accggctcat
      781 gaatggcgac cgtgccgatc cggttttgat tcttgcacgc gccgccggat tcggctggac
      841 gaccgtcaaa gccatcctca atgcccgacc tggcgcaaag ccgtcaccac agaccctcga
      901 tgtggcgcgc gaaaatttcg aacgattgac ggcgaccacc gcccagcgtg tcgtccgctt
      961 ctggcaggtg cggcagggca ccggcgagtg atcatactcg acgaaagatg aaatatgccg
     1021 gctggcgccc ttcacgcctg gccttggcct catagcgcgt gcccgcgaaa tcccgccacg
     1081 gcttgcgcca atcgtcggcg cactcagcgc tccagacgaa atccggcgac cgcatgacgc
     1141 gggccagcgc ataaacggca tagtccgaga tgtctgtcgc aaaccgcagc tcaccgcctt
     1201 ttctgagaat ccgggcgagc cgcttcaaag tatcgtcctg gatgaatcgt cgcttccagt
     1261 gacggcgctt cggccacggg tcggggtaaa gcagatcgat ccgcgacagc gaggcatcgg
     1321 tcagccaatc cagcagttcg cttgcatcgc cgaaatgcag ccggatattc ggcagcgcgc
     1381 catcctcgat cgcaacgagc gccttgccga cggcgttgac gaatgcgtcg gtcccgatga
     1441 aacctgtccg cgggtgagct gttgcctgcg caatcagatg ctccgagccg ccgaagccga
     1501 tctcgagccg cacatcgtca acgggcactg caaacagcat gcgtacatcg gcgggcgcag
     1561 ccggcgtgag ggtgagcgca acgcgtggca gcagcgactc gaatagcgcc gcttgccttg
     1621 ccttcagtgg atgtccttta cggcggccga agaaggcacg ttttgaacct ctgttatcat
     1681 caccgggccg gcgcgagccg ctgtgacccg gtgatcccga ttcatgtggc actgcgttgc
     1741 gtcctaagcg cgatcgccgg agcaggcccg gcgatgacga ttttagtgcc tggtgcctcc
     1801 cgcgaaaatg gaggcctgac gcccgcttgt cggtctactt cacggcgctt ctgatcgcgg
     1861 gcgcgaggtc ggttttctcc cacgagaagc cgccatcctt ttcgggcgcg cggccgaaat
     1921 ggccataggc cgcggtgcgc ttgtagatcg gccgattgag cttgagcgtg cgcctgatgt
     1981 tggtcggggt gagacggaag agctcgggca gaatcttctc gagctttttc tcctcgactt
     2041 tgccggtgcc atgggtgtcg accagaacag acattgggtc tgccaccccg atcgcgtagg
     2101 cgacctggat agtgcagcgg tcggccaagc cggctgccac cacgttcttg gcgaggtatc
     2161 gcgcggcgta agcggccgag cgatcgacct tggtcggatc cttccccgag aacgctccgc
     2221 cgccgtgcgg cgcgtagccg ccataggtgt ccacgataat cttgcggccg gtgaggccgc
     2281 agtcgccgtc gggcccgccg atgacgaaat tgccggtcgg gttgaccaga aaatcggatg
     2341 gcttcttcgg catccagccc ttcggcaggg ccgattcaac cgcatcggtg atcatttcct
     2401 tgataagacc gggagtataa ttcttgccgt tgcggctttg cgcattgtgc tgggtggaga
     2461 ccacgacctt ggtgcagcca accggcttgc catcgacgta gcggatcgtg acctggctct
     2521 tcgaatctgg ctgcaagtcg tagagttggc cgttgcggcg tttctcagaa agaaccttca
     2581 atatcttgtg cgcgaagtag atcgg
//
LOCUS       DATDHO010000831         2437 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_388226, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000831 DATDHO010000000
VERSION     DATDHO010000831.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2437)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2437)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2437
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_388226"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..1096)
                     /locus_tag="VIY07_16205"
     CDS             complement(80..1096)
                     /locus_tag="VIY07_16205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6383333.1"
                     /translation="MRIDAYTHFIPGNFFNRIVEDGHPDIGKRVREIPCIHDLEVRRK
                     IVGGFKDYAQILSYPMPPLEVIAKGDGKLTEGYTKLVNDGLADICAKFPDEFPGWVAQ
                     GALMAPDGGVREAERALKNGALGVQIYTNISGKPLDDPAFDPFFAAMNRLNKPIWMHP
                     ARAANFPDYLTEKKSKYEIWWTFGWSYETAAAMARLVFSKIMDKYPNLKIITHHFGGI
                     VPMLEGRIGPGWDQLGARTSDEDLGVILKQLKKRPLDYFKHSFYADTAVFGGVPATHA
                     GLAFYDPDKIVFASDCPFDPEKGTYYIRETLKILDGLKMPKAKYKAIMHGNLEKITGK
                     RLVK"
     gene            complement(1135..>2437)
                     /locus_tag="VIY07_16210"
     CDS             complement(1135..>2437)
                     /locus_tag="VIY07_16210"
                     /inference="COORDINATES: protein motif:HMM:NF006203.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HEY6383334.1"
                     /translation="EMFDQAGMVRELVKWDYELRVPGQIGDVVARGVEVAMAHPRGPV
                     YLVLPREPLAAPLPEPTAPAKPRPQAGPLHSDPRTIGTLAEWIAAAERPLIITATLPA
                     EAVPPLERLADRCAIPVVTHNPRTVCLPSSHPMHFGYEPGTLLSDADLVIVIESDVPW
                     IPHLQHPPGGCRVAHVGEDPFYVRYPMRSFPSDLAIQASSAQALDALTRAVEPRLQMA
                     DARIAARRARLTDRMRTRRAQLAKDSAPGATISPEYLSHAIGEALGKDAIIINEYPLR
                     PDHCAREKPGTFFALGPAGGLGWGLGAALGAKLAAPDEFVVATLGDGSYMFANPMVGH
                     WVSAVHNLPILTVVFNNSRYGAVRRATLSMFKDGAAGENDGRTLADLDPSPPFEEMAR
                     AQGAHAERVDKPADLPDALARARAVVVNERKQALLNVITPY"
BASE COUNT          449 a          732 c          780 g          476 t
ORIGIN      
        1 tcgtcctcag ccattgactg ctctgacctg agccatggct ttctgttgac cgcttctcag
       61 gaccaaggac gaatgaacat cacttcacca acctcttccc cgtaatcttc tccaggttgc
      121 cgtgcatgat cgccttgtac ttggccttcg gcattttcaa cccgtccaaa atcttcagcg
      181 tctcgcggat gtaatacgtg cccttctcgg gatcgaacgg gcagtcggat gcgaatacga
      241 tcttgtcggg gtcgtaaaac gcaaggccgg catgggtcgc cggcacgccg ccgaacaccg
      301 cggtgtcggc atagaacgag tgcttgaaat aatcgagcgg acgcttcttg agctgcttca
      361 ggatgacgcc gaggtcttcg tcggaggtgc gggcgccgag ctgatcccag cctgggccaa
      421 tgcggccttc cagcatgggc acgatgccgc cgaaatggtg cgtgatgatt ttcaggttcg
      481 ggtacttgtc catgatcttg gagaatacaa gccgcgccat ggcagccgca gtctcgtagg
      541 accatccgaa cgtccaccag atctcatatt tcgatttctt ctcggtcagg tagtcgggaa
      601 aattggcggc tctcgcagga tgcatccaga tcggcttgtt gagcctgttc atggcggcga
      661 agaacggatc gaaagccggg tcgtcgaggg gcttgccgga tatgttggta tagatctgca
      721 cacccagcgc gccatttttc agcgcgcgct ccgcttcacg cacgccgcca tcgggcgcca
      781 tcagcgcgcc ttgcgcgacc cagccgggga actcatcggg aaattttgcg cagatgtcgg
      841 ccaagccatc gttgacgagc ttcgtgtacc cttcggtcaa cttgccgtcg cccttggcta
      901 tgacttcgag cggcggcatc ggataggaga ggatctgcgc ataatccttg aatcccccga
      961 cgatcttgcg tcggacttcg aggtcgtgaa tgcagggaat ttcacgtacg cgcttgccga
     1021 tgtcgggatg accgtcttcg acgatcctgt tgaaaaaatt tccggggatg aaatgggtat
     1081 aggcatcgat gcgcatcaag ttctccgtga ctcttcgatt gacgggttac cggttcaata
     1141 gggcgtaatc acgttgagca aagcctgctt gcgttcgttg acgacgacgg cgcgggcgcg
     1201 ggcgagtgca tcgggaaggt cggcgggctt gtcgacgcgc tccgcgtgag ctccctgtgc
     1261 ccgcgccatt tcttcaaacg ggggcgacgg atcgagatcg gccagcgtgc ggccgtcatt
     1321 ctcgccggcc gcgccgtcct tgaacatcga aagggtggca cggcggacgg cgccataacg
     1381 gctgttgttg aatacgacgg tcagaatcgg gaggttgtga acggccgaaa cccagtgacc
     1441 gaccatcgga ttggcgaaca tgtaagaacc gtctcccagc gtggcgacga cgaattcgtc
     1501 gggcgccgcg agcttggcgc caagcgccgc cccgaggccc cagccgagcc cgccggcggg
     1561 gccgagcgca aagaaggtgc cgggcttctc gcgcgcacaa tgatccggtc tcaggggata
     1621 ttcgttgatg atgatggcat ccttgccaag cgcctcaccg atcgcgtgcg aaagatattc
     1681 gggcgagatt gtcgcccctg gcgcggaatc tttcgcgagc tgcgcgcgcc gcgtgcgcat
     1741 gcgatcggtc agccgagccc gccgggccgc aattctggcg tccgccatct gcaggcgcgg
     1801 ctcaaccgcg cgggtcaagg catccagcgc ctgtgcgctg ctggcctgaa tcgcaaggtc
     1861 gctgggaaag ctgcgcatcg ggtaccgcac gtagaacgga tcctcgccca cgtgcgcgac
     1921 gcggcaaccg ccgggcggat gctgcagatg cggtatccac ggcacatccg attcgatcac
     1981 gatcacgagg tcggcatcgg aaagcagcgt gcctggctcg tagccgaaat gcatcggatg
     2041 gcttgacggc aggcaaacgg tgcgcggatt gtgggtcacg accggaatag cgcagcggtc
     2101 tgcgagacgc tcgaggggcg ggactgcctc ggcgggcaag gtggccgtaa taatcagcgg
     2161 gcgttcggcg gcggcaatcc actcggcgag cgttccgatc gtgcgcggat cggaatggag
     2221 gggacctgcc tgcggccgtg gttttgccgg tgcggtcggc tcgggcaggg gagcagcgag
     2281 cggttcgcgc ggcagcacga gataaaccgg tccgcgcgga tgcgccatcg ccacttcaac
     2341 cccgcgtgcg accacgtcgc cgatctgtcc cggcacgcgc agctcgtaat cccatttcac
     2401 cagttcgcgc accatcccgg cctgatcgaa catttcc
//
LOCUS       DATDHO010000832         4166 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_437887, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000832 DATDHO010000000
VERSION     DATDHO010000832.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4166)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4166)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4166
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437887"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            156..326
                     /locus_tag="VIY07_16215"
     CDS             156..326
                     /locus_tag="VIY07_16215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383335.1"
                     /translation="MEDLRDYPLVVRSEEKVHPARMKLAPSYVVLLTCLEIAKQAKKL
                     PKEPGLGTTGQR"
     gene            complement(330..479)
                     /locus_tag="VIY07_16220"
     CDS             complement(330..479)
                     /locus_tag="VIY07_16220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383336.1"
                     /translation="MAKGQMRSTKEKKKPKADKDRPKQVSAYKLAQMQGPSSSPYNPP
                     PGKKP"
     gene            1012..1497
                     /locus_tag="VIY07_16225"
     CDS             1012..1497
                     /locus_tag="VIY07_16225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383337.1"
                     /translation="MRANEPPRARERWFLNKAAEPVLEATIMRIFLTVAAAAALVCGV
                     ARAGEHTQPPANGDAAVGIGIICNTSQQAQQFVKLRSSGVRPEQAMQAVNAGARDARA
                     CGVAAVAYVRDETVDTMKLKNSLVQIVRINVVAGFNGAGWQRISDMVQYAVLEGEGES
                     V"
     gene            1577..2005
                     /locus_tag="VIY07_16230"
     CDS             1577..2005
                     /locus_tag="VIY07_16230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383338.1"
                     /translation="MLTRFVSAGAVLALAICDSHADENQHSPGAVEQQGGAVSQNVKL
                     PALHLTNAQREQVRKAVLSKHNDVEFQLAETKSAKNFEPKVGATLPQGLVPDGFPDSV
                     IGQLPQLRDYAYLKLKDQVLIVDAINRKIVDVFSETQPLT"
     gene            2663..2962
                     /locus_tag="VIY07_16235"
     CDS             2663..2962
                     /locus_tag="VIY07_16235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383339.1"
                     /translation="MNRIRGCNLKLALLGAAVAACAFASACIPSQAADLRTDYYRPGV
                     KHVRTTLYFSNWRDRCAYAGFYCLYAWDGYVYSYPWDDRPSAYAFARRYHRRHVY"
     gene            complement(3010..>4166)
                     /locus_tag="VIY07_16240"
     CDS             complement(3010..>4166)
                     /locus_tag="VIY07_16240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HEY6383340.1"
                     /translation="GGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPQTLA
                     VSATPGPWEMEDSRGVFVEQVIRPTGLIDPPVEVRPARTQVDDLVGEVRQTAAKGFRS
                     LVTVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTLERIEIIRDLRLGAFDALVGINLLR
                     EGLDIPECALVAILDADKEGFLRSETSLIQTIGRAARNVDGKVLLYADTVTGSMQRAI
                     EETNRRREKQEAYNAENGITPESVRKGIADILDSVYERDHVLIATGPAGSGEFAEAAT
                     IGHNLEAVIAGLETRMREAAADLDFEQAARLRDEIKRLRATELAVLDNPAARDVMVAQ
                     TKGLSRPHKPHLDEMGIALSHEVKPSRPDSPRSKLGRPGMRGGFRSNKRR"
BASE COUNT          847 a         1229 c         1257 g          833 t
ORIGIN      
        1 caacgttcgc cgttgcgtca gctagactgc gatcgcagcc aggcggaatc gccggttccg
       61 gtcgggcagc cggggcagcc agaagcgcca acgcaaacgc ggtcggacca acaagtccag
      121 cgaaccaaag gaaagcgagc acaaaacgcc tcagcatgga ggacctccgc gactacccct
      181 tggtcgtgcg gagtgaagaa aaggttcatc ctgcgaggat gaaactggca ccgagctacg
      241 tcgtattgct cacctgcctg gaaatcgcca agcaggccaa gaagctgccg aaagagcccg
      301 ggctggggac gacaggacag cgatgatttt cagggcttct tgccgggcgg aggattatat
      361 gggctgctgg aaggaccctg catctgcgcc aacttgtagg cggagacctg cttgggcctg
      421 tccttgtcgg ccttaggttt cttcttttcc tttgtcgaac gcatctgacc ttttgccata
      481 gccacctccc tgacgtggag cgatggcgaa tgctagccag cgcatcgatt gacgcaaggg
      541 gatgccaacg gcccctggat aaggaactca ggtcttaggg ggcgcggtcc ccgtggcttt
      601 catcttttcg tcaatgcatt tgttgacgag gtccgcgcgc ttatcgaggt tttcgcgagc
      661 gctgctcttt tcggtgcgca tccagcactc ccgggccgcc cgcgtgcgcg tcatcggttc
      721 ggccttctga gcaggttccg ctggccggga ggaatgggat gctgtggtat caacgtccgg
      781 cctggtcgcc gcggtcgccc gcggggcgtc ggcagccgtt ggaccaatgc cgtcggtttc
      841 gcaagccgca agtatgaaca cgcacgcgac gagcaacccc aaacgagaag cgaaaaaaat
      901 tacaggcttc atacgtgcgt tccagatgct ttgagcgagg agaggcggcc ggctatttgc
      961 ccgaaaacat cctcacgcgc aacgcccttg gcaattggcc atcacaatcg cgtgcgcgcg
     1021 aacgaaccgc cgcgcgcgcg ggaacgttgg ttcctcaaca aggccgcgga accagttctg
     1081 gaggcaacaa ttatgcgtat ctttttgaca gtcgccgcgg cggctgcgct tgtttgtggc
     1141 gtcgcccgtg cgggtgaaca cacccaaccg cccgcaaacg gtgatgctgc agttggtatc
     1201 ggcatcatct gcaacacgtc gcagcaggcg caacaattcg tgaagctccg aagctccggc
     1261 gttcggcccg aacaagcgat gcaggccgtt aatgctggcg cgcgcgatgc ccgtgcgtgc
     1321 ggcgtcgccg cggtcgctta tgtccgggac gagactgtag ataccatgaa gctcaagaac
     1381 agcctggtgc agatcgtacg gatcaacgtg gtcgccggct ttaacggtgc cggctggcag
     1441 cgaatctcgg acatggtcca gtacgccgtc ctggaaggag aaggcgaatc cgtctgacgc
     1501 gcgacagaat gttcctccgc aacctgcaac gcggtcgtgc gtttttcatg aggcggcgac
     1561 atttgaggaa cgagctatgt taactcgttt cgtgtctgcc ggcgcagttt tggcactcgc
     1621 aatctgcgac tctcacgccg atgaaaatca gcattcgcca ggagcagtag aacagcaggg
     1681 cggcgccgtg tcgcaaaacg tgaagctacc tgcgctccat ttgaccaatg cgcagcgcga
     1741 acaggttcgc aaagctgtcc tcagcaagca caatgatgtc gaattccagc ttgcagagac
     1801 gaaatcggca aagaattttg agcccaaagt cggcgcgacg ctgccgcaag gtctcgttcc
     1861 ggacggcttt ccggattcag tcatagggca attgccgcag ctgcgcgatt acgcctattt
     1921 gaaattgaaa gaccaggtgc tgatcgtcga tgcgatcaac cgcaagattg tcgacgtgtt
     1981 ttcggaaaca cagccgttaa cctgaaaaga ttaaccgcca taaggaaatt aacaacggag
     2041 ctacttaacc aattcggctg ttttgatttg ccctgaagcg actctttctt gagattgagc
     2101 ccacaaccga gttcgcgatt tcaagtcgcg acgattgagt ttggaaaacg catggtcgcg
     2161 aagcttattc ttgcaatagc ggcggccgct ttcgtcggcg tactgtctga cagcactgac
     2221 gcatgggcgc gtgggggcaa acgcggccat ggtggcggca tgcactccgc ctggatggga
     2281 aagaacatgc acggagttca cgggaagtcc gggcgtcacc ggcactttcc gggccagatg
     2341 aaccgttcgc acagacacga caatcataag aagcagcagc atcataaaga ctttgcgcag
     2401 ggggtctggc aaaaggcctc gggtaagcaa tcggattccc gcagaaattg gcagggtggc
     2461 ggcagctacg gcggcggtgg ggacggttac ggcgggagtg tcggggacgt ctgcataaac
     2521 tcacagttct gccagggcgt ctggtaccag gtgacgagat cgccgacttc ctccgagtca
     2581 tcggcaacct accagcgaaa ctcgcaacct ttcgacaagt gatcgccgat caatggcaaa
     2641 tcatcgaacc agtgggcgaa agatgaatcg cattaggggc tgcaatctaa aactggcgct
     2701 actcggtgcc gcagtcgcgg catgtgcctt tgcttctgca tgtattccat cgcaagctgc
     2761 tgacctgcgt acggattatt atcggcccgg cgtcaagcat gtcaggacga cgttgtattt
     2821 ctcgaactgg cgcgaccgct gtgcgtatgc aggcttctac tgtctctatg cctgggacgg
     2881 ctacgtctat agttatccat gggatgatcg tccatccgcc tatgcgttcg cgcgccggta
     2941 tcatcgtcga cacgtctact aggccaagca cagccttcgc gcggcgacgc aattccattc
     3001 atcggatgtt taacgacgct tgttgctgcg gaagccgccg cgcattccgg gccggcccag
     3061 cttagagcgc ggggaatccg gtcgcgatgg cttcacctcg tgcgacaaag caatacccat
     3121 ttcgtcgaga tgcggcttgt gcggccggct caagcccttt gtctgcgcca ccatcacgtc
     3181 gcgcgccgct ggattgtcca acaccgcgag ttcagtcgcg cgaaggcgct tgatttcgtc
     3241 acgcagccgc gcagcctgct cgaagtcgag atcggccgcc gcttcgcgca tgcgcgtctc
     3301 gagacccgca atcaccgcct cgagattgtg accgatggtg gcggcctcgg cgaattcgcc
     3361 ggagccggcg ggtccggtgg caatgagcac gtggtcacgc tcgtacacgc tgtcgagaat
     3421 gtcggcgatg cccttgcgca cgctctccgg cgtgatgccg ttttccgcgt tgtaggcctc
     3481 ctgcttttcg cgccgccggt tggtctcctc gatcgcgcgc tgcatcgagc ccgtgaccgt
     3541 atcggcataa agcaagacct tgccatcaac gttgcgcgcg gcgcggccga tagtctgaat
     3601 cagactggtc tcgctgcgaa gaaatccctc cttgtccgcg tcgagaatag ccaccagcgc
     3661 acattcgggg atatcgaggc cttcgcgcag caggttgatc ccgaccagcg catcgaatgc
     3721 gccgagccgc aggtcccgga tgatctcgat gcgctccagg gtgtcgatgt cgctgtgcat
     3781 atagcgcacg cggatgccct gctcatgcaa atactcggtc agatcctctg ccatgcgctt
     3841 ggtcagcaca gtgaccagcg aacggaatcc ctttgcggcg gtctgccgta cctcgccgac
     3901 gagatcgtcc acctgcgtgc gggcaggccg cacttcgacg ggaggatcga tcaaccccgt
     3961 gggtcggatc acctgttcga caaagacgcc acgcgaatct tccatttccc aggggcccgg
     4021 tgtcgccgaa acggcgagcg tctgcggacg catggcgtcc cactcctcga agcgcagagg
     4081 acggttgtcc atgcatgatg gcagccggaa gccatattcg gcgagcgttg ccttgcggcg
     4141 gaaatcgccg cggtacatgc cgccga
//
LOCUS       DATDHO010000833         3711 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_437942, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000833 DATDHO010000000
VERSION     DATDHO010000833.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3711)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3711)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3711
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_437942"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..722
                     /locus_tag="VIY07_16245"
     CDS             <1..722
                     /locus_tag="VIY07_16245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional [glutamine synthetase]
                     adenylyltransferase/[glutamine
                     synthetase]-adenylyl-L-tyrosine phosphorylase"
                     /protein_id="HEY6383341.1"
                     /translation="TQRLINTLTAQTNYGALFQVDMRLRPSGRAGPLATQLESFSAYQ
                     ETEAWTWEHMALTRARVVSASPAFKQKLESVIRDVLRQPRNAELIAGDVVEMRAAIAK
                     EKGDRNRWDLKYVAGGLIDIEFIAQYLQLIHAHRLPEILDTSTVRVLDKARSLRVLSP
                     EDAEVLRPAVELYHDLTQILRLCLTEAFNPKTAGTGLLRLLARAADVPDFATLEATVA
                     DLQAKVRESFVRILGKAPESG"
     gene            complement(719..3013)
                     /locus_tag="VIY07_16250"
     CDS             complement(719..3013)
                     /locus_tag="VIY07_16250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6383342.1"
                     /translation="MARASVASASANADSIKGLAQSIAKPAYRRLLNAEPLLRRAVPV
                     LIIAFLATICVGALVQVLDHRRQTLASEIASLEAVGDFSAERFRQPVKQPASAAEQPQ
                     QVLARALPSWAMAPGRRFLLTNADGIVTASMPATDGVIGRRLLDLVGPTQPLTTFGAS
                     AGVMDIALPDDTRALATVRMLKAPFGQLAVIQSREPALASWRSLTTLTVTLSATTGFV
                     VLILGFAFHWQATRAREADLIHETVRSRIDTALNRGRCGLWDWDLARGRIFWSQSMFE
                     ILGLDTKHDLLSFGDVNALVHPDDVQLYQLAAELADATTTTIDHAFRMRHAAGHWVWL
                     RARCELVRQAGESGLHLIGIAVDITEQKNLVEKTVAADMRLRDAIETIPEAFVLWDAE
                     NRLVLCNSNFQELHHLPDEAITVGASYESVVAAGSKPVVRNKVTTAGPSIPGARTFEA
                     QLEDGRWLHISERRTKDGGYVSVGTDITALKAHEEKLLDSEKRLMATIADLRASQQRS
                     SELAEKYAEEKTRAEEANQAKSKFMANMSHELRTPLNAIIGFSEIMESGMFGPLGAER
                     YSEYCSDIRGSGQYLLEVINDILDMSKIEAGRIRLDFEDLDLDSLLGEAMRVVGARAQ
                     NKRLQLSARISPELRLRADRRALKQVILNLLSNAVKFTPSGGRVTVRGQASKHCIMLA
                     IADTGIGIAKEALARLGRPFEQVESQLTKSHQGSGLGLAISKSLVELHGGHMRIRSTL
                     GKGTLVMVRLPLEPQCHLPKEEAA"
     gene            complement(3198..>3711)
                     /locus_tag="VIY07_16255"
     CDS             complement(3198..>3711)
                     /locus_tag="VIY07_16255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminopeptidase N C-terminal domain-containing
                     protein"
                     /protein_id="HEY6383343.1"
                     /translation="QYADADNMTDRMAALATLSLHDVVERQRALDDFYARYSSDALVV
                     DKWFSLQATVPEAGVLDNVRRLTAHPAFSLANPNRVRALIGAFAQGNPTQFNRADGAG
                     YEFVADTVRVLDPKNPQVSARLATAFRTWRMLESGRRAKAEAALTRLKTTPGLSRDLS
                     DIVERALAVP"
BASE COUNT          752 a         1055 c         1116 g          788 t
ORIGIN      
        1 ttacccagag gcttatcaac acgctcacgg cgcaaactaa ttatggggct ctcttccagg
       61 tggatatgcg gctgcggcca tcaggccgcg ctggccccct ggcgacacaa ctcgagagtt
      121 tctccgcata tcaggagaca gaggcgtgga cgtgggagca tatggccctg actcgggcac
      181 gagttgtatc tgcttctcct gcattcaagc aaaaactaga gagtgtcatc cgtgacgtat
      241 tgcgccagcc gcggaacgct gaattgatcg ctggcgatgt cgtggaaatg cgggccgcca
      301 tcgccaagga aaaaggcgat cgtaatcgct gggatctaaa atacgtggca ggaggcctga
      361 ttgatatcga gttcattgcc cagtatttgc agctcatcca cgctcatcgc ttgccggaaa
      421 tactcgatac ttcaaccgtg cgtgtgctcg acaaggcgcg gtcactgcgc gtgctgtcgc
      481 cagaggatgc ggaagttctt cgtcccgccg tcgagctcta tcatgatctc acgcaaatcc
      541 tccgtctgtg cctgacagag gcgttcaatc ccaagacggc tggcacagga cttttgcggc
      601 tgttggcacg tgcagccgat gtgccggact tcgcgaccct cgaggcgacg gtagccgacc
      661 tgcaggcgaa agtgcgggaa agctttgtgc ggatcctggg gaaagcaccc gagtctggct
      721 aggctgcttc ttccttgggt aggtggcatt gcggctcaag gggaagtcgg accatcacta
      781 gcgttccctt tccaagtgtc gagcgaatgc gcatgtgtcc gccgtgcagc tcgacaagtg
      841 atttcgaaat ggcgagtcca agcccagaac cctgatggct ctttgtgagc tggctttcga
      901 cctgctcgaa tggacgcccg agccgggcaa gagcttcctt ggcgatgccg ataccggtgt
      961 ctgctattgc gagcattatg caatgtttgc tcgcctgccc gcgaacggta acgcgtccgc
     1021 ctgacggagt aaatttaacc gcgttagaca gcaaattcag gataacctgc ttcagagctc
     1081 ggcggtcggc acgcaatcgg agttccggcg atatcctggc cgacagctgc aggcgtttgt
     1141 tctgcgcacg tgcgccaacg actcgcatcg cttccccaag cagcgaatcc agatcgagat
     1201 cctcgaagtc cagccggatg cggccggcct cgattttcga catatccaga atgtcgttga
     1261 ttacctcgag cagatattgg ccgctgccgc gaatgtcgct gcaatattcg ctatatcttt
     1321 ccgcgccaag aggaccgaac attccggatt ccatgatttc ggagaagcca ataatcgcgt
     1381 tgaggggggt acgcagttcg tggctcatat ttgccataaa ttttgatttt gcctgattgg
     1441 cttcttcggc tcgggttttc tcctcggcat atttttcagc gagttcggac gagcgctgct
     1501 gcgacgcgcg caggtccgca attgtcgcca tgagcctttt ttcgctgtcg agcagttttt
     1561 cctcgtgggc cttgagtgcc gttatgtccg tgcccaccga cacgtagccg ccgtcctttg
     1621 tgcgtctttc gctgatatgt agccagcggc catcctcgag ctgcgcttcg aacgtgcgcg
     1681 cgccagggat gcttggccca gccgtggtca ccttattgcg gactacaggc ttgcttccgg
     1741 cagcgacaac cgactcgtaa gacgcgccaa ccgtgatcgc ttcgtcaggc aggtggtgaa
     1801 gctcctgaaa attcgaattg cagagcacaa ggcgattttc cgcgtcccac agtacgaacg
     1861 cttcggggat ggtctcgatg gcatcacgca ggcgcatgtc ggcagctacg gtcttttcga
     1921 cgaggttttt ctgctcggtg atgtcgacgg ctatgccgat cagatggagt cccgattcgc
     1981 cggcctggcg caccagctcg cagcgtgcgc gcagccatac ccagtggcct gcggcgtgac
     2041 gcatgcgaaa cgcatgatcg attgttgtcg tagttgcatc ggcgagttca gccgcgagct
     2101 ggtacaattg aacgtcgtca ggatgcacca gcgcattcac atccccgaat gaaagcagat
     2161 cgtgttttgt gtccagtccg agaatttcaa acatcgactg cgaccagaag attcgtcctc
     2221 gggcaaggtc ccagtcccaa agtccgcagc ggccgcggtt gagcgcagta tcgatccggc
     2281 tgcggacggt ttcgtggatg aggtcggcct cccgggctct tgtcgcctgc caatgaaaag
     2341 cgaatcctaa aataagaacg acgaatccgg tggtggctga caaagtaaca gtgagcgtgg
     2401 tgagagagcg ccagctcgcg agagctggct cgcgtgactg gataaccgcc aactggccaa
     2461 atggggcctt gagcatgcgc accgtcgcca acgcgcgcgt gtcgtcgggt agagcgatat
     2521 ccataacgcc tgcactggcg ccaaacgtcg ttaagggttg ggttggtccg accaaatcca
     2581 gcaggcgacg accgattacg ccgtctgtgg caggcatcga agccgtaacg atgccgtcgg
     2641 cgttggtgag aagaaaacgt cgtccggggg ccatcgccca ggacggcagc gcgcgcgcca
     2701 ggacctgttg cggttgctca gccgcgcttg cgggctgttt taccggctgc cggaagcgct
     2761 cagccgagaa gtcaccaacg gcttcgaggg atgcaatctc gcttgccagc gtttgccggc
     2821 gatggtcgag aacctgtaca agggcaccga cacaaatggt cgccagaaag gcgataatca
     2881 gcacggggac ggcgcgtcgc aaaaggggct cggcgttcag aagacgccga taggctggct
     2941 tggcgattga ttgcgcgagg cccttgatag aatccgcgtt tgcagacgca ctcgccacgc
     3001 tggcgcgcgc catagaaggc ctccgttcgg aatgtcccca gtcaccctca agacggaagg
     3061 atgtgccgca tcgcttcccg aatcacccgt tgattggaat cgatggacgt tgatttgtcg
     3121 agagtcggaa gagtcaaatc tttaaaaaat gttacccacg gttcgatttc gagcatagtc
     3181 gccgtcgtcc cgggttatca gggcaccgcc aacgcgcgct ccacgatgtc gcttaaatcg
     3241 cgtgagaggc ccggcgtcgt tttcaagcgg gttagcgcgg cctctgcctt ggcgcggcgc
     3301 ccgctttcga gcatccgcca ggtccggaaa gcagttgcaa gccgggccga aacctgcgga
     3361 tttttcggat cgagtacgcg tacggtatcg gcaacgaatt catatccggc accgtcagcg
     3421 cgattgaatt gggtcggatt gccttgtgca aaagcgccga tcagtgcacg gacccgattt
     3481 ggattggcga gagagaaggc ggggtgcgcg gtgagtctcc gcacgttgtc cagaacaccg
     3541 gcctccggaa cagtcgcctg taaggagaac cacttgtcta cgaccagggc atccgacgaa
     3601 tagcgtgcat agaaatcgtc gagcgcccgc tggcgctcca cgacgtcatg aagtgacagt
     3661 gttgcaagcg ccgccatgcg atcagtcatg ttatccgcgt cggcatactg c
//
LOCUS       DATDHO010000834         1940 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_140933, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000834 DATDHO010000000
VERSION     DATDHO010000834.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1940)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1940)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1940
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140933"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..223)
                     /locus_tag="VIY07_16260"
     CDS             complement(<1..223)
                     /locus_tag="VIY07_16260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015934278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HEY6383344.1"
                     /translation="MPDSVSLIKEALLERFGERLEIAPDLTGLDEIARIAAHRVHRRY
                     LARDIPPHLVRLLCACALSAPSKSDLQQAD"
     gene            374..1633
                     /locus_tag="VIY07_16265"
     CDS             374..1633
                     /locus_tag="VIY07_16265"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEY6383345.1"
                     /translation="MANNDVEVAVVGGGAAGLAAARRLSRANVSCLIVEARSRLGGRA
                     WTVQGPSGSALDLGCGWLHSADRNPWVAIAEEQHRTIDRNPPPWRRRSLANGFPEGGQ
                     REFLEAQEKFYARVSERAVKEPDVSVAAMFEPGCRWNPLINAVGTYISGAELEDVSAR
                     DFDNFDDTGVNWRVVEGYGATIAACGASLPVVLGCAVLAIDHSAKRLKIETTQGRIIA
                     DRVIVTLPSAIIADVEDLFIPRLPEKTRAAEGLPLGLTNKLFMSLEGADEFEKDSRLF
                     GATDRTATAAYHLRPFGRPQIEAFFGGRLAAGLEVAGEDAFFEFAISELAGALGNAFV
                     KRVRPIRIHRWSADPFSRGSYSYARPGMTDCRSKLAAPVDDRLFFAGEACSPHDFSTA
                     HGGWITGVVAADQVLGARERAQTRAKG"
BASE COUNT          384 a          546 c          587 g          423 t
ORIGIN      
        1 tgtcggcctg ctgaagatcg cttttcgacg gcgccgacag cgcacaggcg cacaacagtc
       61 gcaccaaatg cggtggaata tcgcgtgcaa gatagcgccg gtgtacccgg tgcgcggcga
      121 tgcgggcaat ttcgtcgaga ccggtcaggt caggggcgat ttccagccgt tcgccgaaac
      181 gctccagaag cgcttcttta atgagtgaga cggaatccgg catcaaataa ttcctcctcc
      241 gaatgaccgt ttatggtgct gcgccattgc gatgatgcgt gaatggcaac aaagaacaag
      301 cagagaccaa ttcgcattcg gtaacaccat agttatatgt accggcagac tcgagccggg
      361 cactgattcg gaaatggcaa ataatgatgt cgaggtggca gtcgtgggcg gcggagcggc
      421 cggccttgcc gccgctcgtc gcctttctcg ggcgaacgtc agctgtctga tagtcgaggc
      481 tcgctccagg cttggcggcc gcgcgtggac ggtgcaggga ccttcaggct cggccctcga
      541 tctcggctgc ggatggttgc attccgcgga ccgcaatccg tgggttgcaa tcgcggagga
      601 acagcaccgc acgatcgaca ggaatccgcc accgtggcga agacgatcgc ttgcaaacgg
      661 attcccggag ggtggacagc gggaatttct tgaagcgcag gagaagtttt acgcgcgggt
      721 gagcgagcgg gcagtgaaag agcccgatgt gtctgtggcg gcgatgtttg agccaggctg
      781 ccgctggaat ccgttgatca acgcagtcgg cacatacatc agcggcgccg agcttgaaga
      841 cgtttcggcg cgggactttg acaacttcga cgataccggc gtcaactggc gcgtcgttga
      901 aggttacggc gcaacgatcg ccgcttgcgg agcgagcctg cccgtggtgc tcggttgcgc
      961 cgtgctcgcg atcgatcaca gcgcgaaacg tctgaagatc gagacaacac aaggtcgcat
     1021 cattgctgac cgggtcatcg tgacgctgcc gagcgcaatt atcgccgacg ttgaagattt
     1081 gttcatcccg agattgccgg agaagacccg cgcggccgaa ggcctgcctc tcggccttac
     1141 caacaaattg ttcatgtcgc ttgaaggcgc tgatgagttc gagaaggaca gccggttgtt
     1201 cggcgccacc gaccgcaccg ccacggccgc ctatcacctt cgacctttcg gccgcccgca
     1261 gatcgaagca ttttttggcg gccgcttggc tgccgggctc gaggtagccg gggaggacgc
     1321 ctttttcgag tttgcgatat ccgaacttgc aggcgccctt ggcaacgcct ttgtcaaacg
     1381 ggtgagaccc attcgcatac atcgctggag cgcggacccg ttttcgcgcg gctcatattc
     1441 ttacgcgcgc ccgggcatga cggattgccg ctcgaagttg gccgcgccgg tcgatgaccg
     1501 cctgtttttt gccggcgagg cctgctcgcc tcacgatttt tcgaccgcgc acggcggttg
     1561 gatcactggc gtcgtggctg cggatcaggt cttgggcgcg cgagagcgcg cgcaaactcg
     1621 ggcaaaaggc tagtggcagg acattctgtg tcgtatcgcc aatacaaaat cggattggtt
     1681 aatcgagtgc ctgaagtttt tgtcgtctaa aacattcttc atgtcgtttt tggcttcatc
     1741 gtcaattcaa attttttgaa cgccgttgca ttctcatatt cctcgatcgc gatcgatttc
     1801 ggtgttcaga aatcaaaccg tttattgcct cgctaatgta ccctattccc gcggggcaac
     1861 gatgcgggag agaacttttt gcgaataccc gcgcccattc gtcacctgct cgacattgtc
     1921 atctattcgc cataaaactt
//
LOCUS       DATDHO010000835         3756 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_140990, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000835 DATDHO010000000
VERSION     DATDHO010000835.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3756
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_140990"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..303
                     /locus_tag="VIY07_16270"
     CDS             <1..303
                     /locus_tag="VIY07_16270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016841390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEY6383346.1"
                     /translation="LAGIMAAKRTHGLIPLCHPLPLTKVEIDINPEHALPGFLVQATV
                     KVTAKTGVEMEALTAVSIACLTIYDMVKAFERGVRIEGIRLLLKSGGKSGEWRAES"
     gene            307..1515
                     /gene="glp"
                     /locus_tag="VIY07_16275"
     CDS             307..1515
                     /gene="glp"
                     /locus_tag="VIY07_16275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HEY6383347.1"
                     /translation="MALLPVAEALQRVLADAKPLPAEAAPLDEALGRILTEDVAALRT
                     QPPAAVSAMDGYAVRAGDVAQAPVVLKVIGQVAAGHPFTGKVGPGEAARIFTGGIMPE
                     GSDTVVIQELTTPDTNGVIIQKPTAAGRNVRAEAIDFAQQQILLRKGRRLTARDLMLA
                     AAMNHSRLSVHRKPTVAILGTGDELVPPGATPRPGEIVYSNGFALAALARGNGAEVHD
                     LGIARDRIEDIAAAVHRARQSGADILVTSGGASVGEHDLVQRALAGEGLELSFWRVAL
                     RPGRPMLHGRLGAMQVLGVPGNPVSAYVCAFLFLVPLIRKLAGRPDIADPPQTARLGR
                     DLPANDERADYLRATLEETQNGPVATPLPAQDSSLMAPLAKADCLLIRAPHAPAAAAG
                     SECVILKLGL"
     gene            1642..2343
                     /gene="lexA"
                     /locus_tag="VIY07_16280"
     CDS             1642..2343
                     /gene="lexA"
                     /locus_tag="VIY07_16280"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEY6383348.1"
                     /translation="MLTRKQFELLRFIHERLTEAGVPPSFDEMKDALDLRSKSGIHRL
                     ITALEERGFIRRLPNRARAIEVIKLPDSVGHGLASVRSRGFTPSVIEGDLGRVRTTSE
                     DDGGRPVAVPVMGRIAAGTPIEAIQTRSHVINMPPDLLSAGDHFALEVRGDSMIEAGI
                     LDGDIALIRKSEAADTGDIVVALIDDEEATLKRFRRRGASIALEPANTAYEVRILPPN
                     RVRIQGKLVGLFRRY"
     gene            complement(2340..>3756)
                     /locus_tag="VIY07_16285"
     CDS             complement(2340..>3756)
                     /locus_tag="VIY07_16285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HEY6383349.1"
                     /translation="ISGPVNDAMYVSSLAHVLSISGYHMAVVAGIVFFLIRAGLALIP
                     SLASRHPIKKWAASGAIIAAAFYLLLSGAEVATQRSFIMIAIVLAGVIVDRAALTFRT
                     LAVAAIVVLLLAPQAVVHPSFQMSFAATLALIATYQRALPWHPDSDSSLGRRVALWGV
                     REVTALLLASLVAGLATMPYAAYHFHRLAPYGVLANLLAMPVVSALVMPMGILGVVTM
                     PFGFDAVFWRLMGDGIDWMIRVALWVSALPGAVGRMPAFGTGPLLAGTGGLLLVCLLR
                     TPFRWCGAILLVGAGLCAVATPRPDVLVANDGQAVAIRGRDGRLSVLHSGRDSFAIKE
                     WLAADADARTPKDPSLSDGVSCDAIGCIGKLADGRFVAMALEVEAFAEDCARAAVVVS
                     ARQAPSASCAAILIDREVWRAGGALALRWTGERFEKTVTRPADHERPWTRVANGTATG
                     ARVSASPGDATPRPEVLEADD"
BASE COUNT          733 a         1224 c         1159 g          640 t
ORIGIN      
        1 cttgccggca tcatggcggc aaaacgcacg catggcctta ttccgctctg ccatccgctt
       61 cccctcacga aggtggaaat cgacatcaac ccggaacacg cgttgcccgg tttcctggtg
      121 caggcgaccg tgaaagtgac cgccaagacc ggggtcgaaa tggaagccct gacagcggtc
      181 tcaatcgcgt gtctgacgat ctacgatatg gtcaaagcct ttgaacgggg cgtgcgcatc
      241 gagggcattc gactgctcct caagagcggc ggcaaatcgg gcgagtggcg cgcggagtca
      301 tagccaatgg cgctgctgcc ggtcgccgaa gctctgcaac gtgtgctggc tgatgctaaa
      361 ccgctgccgg cggaagctgc ccctctcgac gaagcgctcg gccgcattct caccgaagat
      421 gtagccgcgc tccgcacgca accacctgcg gcggtttcgg caatggacgg ctatgccgtg
      481 cgcgccggcg acgtcgccca ggcaccggtc gtgcttaagg tgattggtca ggttgcggcc
      541 ggccatccct tcacggggaa agtcggtccc ggcgaagcgg cacgcatctt taccggcggc
      601 atcatgcctg aaggcagcga cacggtcgtc attcaggagc tcacaacgcc ggacacgaac
      661 ggcgttatta tccaaaagcc gacggctgcc gggcgcaacg tgcgcgctga agccattgac
      721 tttgcgcagc agcagattct tttgcgcaag ggccgacgcc ttaccgcgcg cgacctgatg
      781 ctcgcggctg ccatgaatca ttcgcgcctc agcgtgcacc gaaagcccac cgtcgcgatt
      841 ctcggcaccg gcgacgaact cgtgccgccc ggcgccactc ccaggccagg cgaaatcgtt
      901 tattcgaacg gctttgctct tgcggcactc gcgcgcggga acggagccga ggtccatgac
      961 ctcggcatcg cgcgtgatcg tatcgaagac atcgcggccg ccgtgcatcg tgcacggcaa
     1021 tcgggcgccg acatccttgt gacctccggg ggtgcctctg tcggcgaaca cgacctggtc
     1081 cagcgcgctc tggcgggcga aggtcttgaa ttgtcttttt ggcgcgtagc cctccgcccg
     1141 ggccgcccca tgctgcatgg ccgccttggt gccatgcagg tcctcggcgt ccccgggaac
     1201 ccggtctcgg cctatgtctg cgcttttctg tttctggtcc ccttgatccg gaagctggca
     1261 ggaaggcccg atattgcgga cccgccccaa acggcccgcc ttggcaggga tcttccggcg
     1321 aacgacgagc gggccgatta tctgcgggcc accctcgagg aaacccagaa tggcccggta
     1381 gcgaccccct tgcccgccca ggacagctcc ctgatggcgc ccctggccaa agccgactgc
     1441 ctgctgattc gggcgcccca cgcccccgca gcggccgccg gttcagagtg cgtcatcctt
     1501 aagctaggcc tttagccgcc tttcgagttt ttcactccaa attaatcggt tgcagaacac
     1561 atatcgaaca gatagtgtcc gttcatgatt tgtttctggc ttggacacac caaggtgggc
     1621 ccggcctacg gggagagacc gatgctgacc cgcaagcaat tcgagcttct acggttcatc
     1681 cacgagcggc tgaccgaagc tggagtgcct ccatcatttg acgagatgaa ggacgccctg
     1741 gacttgcgtt cgaaatcggg gatccaccgc cttattacag cgctcgagga gcgcgggttt
     1801 atccgccgtt tgcccaaccg ggcccgcgca attgaggtca tcaagttgcc ggactcggtc
     1861 gggcacgggc ttgcgtctgt gcggtcacgc gggttcaccc ccagcgtgat cgaaggcgat
     1921 cttggacgcg tgcgcacaac atccgaggat gatggcgggc ggccggttgc cgtaccggtc
     1981 atgggccgca ttgccgccgg cactcccatc gaggcgatcc agactcgcag ccatgtcatc
     2041 aatatgcctc ccgacctgtt gtcggcgggg gaccacttcg ccctcgaggt ccgcggcgac
     2101 agcatgatcg aggcgggcat ccttgacgga gacattgcgc tgatccgcaa atcggaagcg
     2161 gcagacaccg gcgatatcgt ggtggcgctc atcgatgacg aggaagccac actgaaacgt
     2221 tttcgccgcc gcggcgcctc gatagcgctc gaacccgcca acacagccta tgaggtgcgc
     2281 atcctgcctc ccaatcgcgt gcgcattcag ggaaagttgg tcggcctctt ccggcgctac
     2341 tagtcatccg cttcgaggac ttccggccgc ggcgtcgcgt cgcccggcga agcggacacc
     2401 cgcgcaccgg ttgccgtacc gttcgcgaca cgtgtccatg gtcgctcgtg atcggcgggg
     2461 cgcgtgacgg tcttttcgaa ccgttcgcca gtccagcgca gcgctaacgc gccacctgcc
     2521 cgccagacct ctcgatcaat aagaatagcg gcacaagacg ccgatggcgc ctgtcgcgcg
     2581 ctgacgacca ccgcagcacg agcgcagtcc tcggcaaagg cttcaacttc cagagccatt
     2641 gccacgaacc ggccgtcggc cagtttgccg atgcagccaa tggcgtcgca cgacacaccg
     2701 tcgctcaggc ttggatcttt cggcgttcgc gcgtctgcat cggcagcgag ccattccttg
     2761 atcgcaaaac tgtcgcggcc gctgtgaagc actgagagtc tgccatcgcg gccacgaatt
     2821 gccacggcct gcccatcatt ggcgaccagc acatccggtc gcggcgttgc gacagcacac
     2881 aggccggcgc cgacgagcaa tatcgctccg caccagcgaa atggcgtgcg cagcaggcag
     2941 acaagcagca gaccgcctgt gccggcgagc aacggtccgg tgccgaaggc cggcatgcgg
     3001 ccgactgcac caggcagggc cgatacccac agcgcgaccc tgatcatcca gtcgatgcca
     3061 tcgcccataa gacgccagaa caccgcatcg aagccgaacg gcatggtcac gacgccaaga
     3121 attcccatcg gcatcacaag ggccgagacc acgggcatcg cgagcagatt tgcgaggacg
     3181 ccgtaagggg cgaggcggtg aaagtggtaa gccgcgtaag gcattgttgc gaggcctgcc
     3241 accagcgatg cgagcagcag agccgttacc tcgcgaacgc cccatagcgc gacgcgccgg
     3301 ccgagcgagc tgtcgctgtc ggggtgccat ggcagcgcac gttgatatgt cgcgatcagg
     3361 gcgagcgttg cagcaaagga catctgaaag ctgggatgaa cgaccgcctg cggagccagc
     3421 aacaggacaa cgatggcagc gacagcgagt gtccggaaag tgagcgccgc ccgatccaca
     3481 atcacgccgg cgagcacaat cgcgatcatg atgaatgaac gttgcgtcgc gacctcggcg
     3541 ccggagagca aaagatagaa cgctgccgcg atgatagcgc ccgatgccgc ccattttttt
     3601 atgggatgac ggctcgcgag tgacgggatc aaggcaagcc ctgcgcgaat taaaaagaaa
     3661 acaatgccgg ccacgacggc catgtgatag ccggaaatcg aaagcacgtg ggcgaggctc
     3721 gaaacataca ttgcatcgtt gacgggccct gagatc
//
LOCUS       DATDHO010000836         1955 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_438064, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000836 DATDHO010000000
VERSION     DATDHO010000836.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1955
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_438064"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1689)
                     /locus_tag="VIY07_16290"
                     /pseudo
     CDS             complement(1..1689)
                     /locus_tag="VIY07_16290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320202.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="caspase family protein"
BASE COUNT          418 a          552 c          617 g          368 t
ORIGIN      
        1 ggggctgccc tctagttctt ccgggcaagg gctgtcccat cggcggctgg ctaggctgag
       61 taccagtggc cggcgcggtt gacccctgct gaggcgtcgt tggaatagcg ctggccttct
      121 cggcgacaga tggcggcaga gctggcccga tcgcagcggc cggaactgtc ggtctgccgc
      181 ccggcgcggg ctgtgcggac ggcgctgcgg ttgcaggagt tacggttctt gtccgaccac
      241 ttggctcggt gatcgtgacc gtattgatgt tgttaacgac gactgtgttg tgaacgttct
      301 ggaaaataac gttattcgga ggtggcggcg caacgtaaac gggcgggcgt acccataccg
      361 gcactggggt atacaccggg atcggcagca ggaagatgcc gagtggcggc ggcggtggtg
      421 ggagaaaaaa gactggcggt ggtggcaaaa aaagactggc ggcgggggcg gcggctcaaa
      481 cgcatagatt ggatcgtcga aaaccagcac cggctgctca acatagacga tctcctcagg
      541 cggcggcggg ggcacgtcgt aagtcacctc ggcgaacgag ggtggcggct cgaaggcggc
      601 ggagagaaaa gcaaggcggc gacgcgcatc ggccgcgtgt ggcccgcgcg ggtagcgccg
      661 caggtaagac caataggcgt taggcgtatc aatagatcgg gtgcggcgcc agactatcgc
      721 ctcccgtcgc gcagcggtga tggcccttac acgtttggcc atcggatcgt cgggataagc
      781 agcgaggaag tcgttgtaac cttgcagggt atcttgctct aacgccgcgg cgtaggcgtc
      841 ttgcggcccg agctcgcgga tcggtcgcga acgcatcgtc tgcatctgct cggctgacac
      901 tgcgggcggc ggcgcatcgg gcgctcgctc aaagaacaag aatgcctctt gtatcctcga
      961 cgcatgccat ggaacttccg tgccctttgt cacgtcgtta acgcgcagac gaacgcggtc
     1021 gaacagctcg gttagtggca atcctccatc gcgcatcatt tccgccagcg cctgagcata
     1081 agccccataa gagccggatc cttcaggggc tacgggcccg ggtgcggcat tgtaagcgag
     1141 cagcaaacca ggctctggct ctaccagagc cagaccgccg gcgagcggtg ggccagagcg
     1201 tgcaaacggg tttggatgcg ctgcatcgag aacgacgata cttgccttct gcttcagtgc
     1261 cgctaagggt cgcaaataat cggacacccg cactgcgcta accgctacat ccgtgtctcg
     1321 ggcaatccgc gcatcaattg ggacaaggta attttcgcct tcaagctgaa gtccgtatcc
     1381 cgcaaaataa atgaacgcga ccgtatcagt ccctgagcct gcggccttct ccagaaaatc
     1441 gcgaaagctg cgacgcaacg tatcctgatc aaggtcacga gcgcccacta cgtcaaaacc
     1501 tgcagcttgc agggtctggg caatcagacc agcgtcattg gctgtgtttt tgaggggagc
     1561 ttcctgataa gcggcgttgc cgactacaag cgcaatacgc ttctcggcgt gtgccggttc
     1621 ccctgcaacc aagcaggcaa ataacaatgg cagccacagc tggctaatga aactgcgaga
     1681 actaagcatg actgccgacc ccgcctgacc agtaaacaat aatgaatcca cactaggtca
     1741 aaactgagga ccggcggata gttccaagcc gtctcctcgt atcacagtcc gtagccttgt
     1801 gaaatttgat gagacccaat ccgcgaatgt caagaatagt aatggcggca gcggtccgtg
     1861 acgactcggg tgtcagcgcg atgtcatttt tgcccgaaag cagatgcgcc aacagatgtc
     1921 aggcgtcatt gagcacacct tatcgcggcg attcg
//
LOCUS       DATDHO010000837         4396 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_191403, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000837 DATDHO010000000
VERSION     DATDHO010000837.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4396)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4396)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4396
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191403"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..112)
                     /locus_tag="VIY07_16295"
     CDS             complement(<1..112)
                     /locus_tag="VIY07_16295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY6383350.1"
                     /translation="MPIKVGERLPDAKFRVMSTEGPVWKTTDELFKGRKVA"
     gene            complement(177..1016)
                     /locus_tag="VIY07_16300"
     CDS             complement(177..1016)
                     /locus_tag="VIY07_16300"
                     /inference="COORDINATES: protein motif:HMM:NF022853.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HEY6383351.1"
                     /translation="MANIHRSPLTALIALGIAAFSATSGHAADESPWSEDIRSAVRII
                     AGTNKNADAPLRAGIEIKMQPGWKTYWRYPGDSGVPPQFDFSNSENLKSATVLYPAPR
                     LFKDETGQTLGYKERVVFPVLLSPQQPGKPVKLRLKVDYAVCEKVCVPVEGRAELTLG
                     SGNSAHNAELSAAEGRVPRQVSAAQAGLNARRVNSGTKPMVTVDLAAPAGQTVDLFVE
                     GPTPRWALPIPKPVKPAPAGRAQFSFEMDGSPPGTDPKGPIDLTYTIVTGERAFEVKG
                     RLD"
     gene            1194..1811
                     /locus_tag="VIY07_16305"
     CDS             1194..1811
                     /locus_tag="VIY07_16305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEY6383352.1"
                     /translation="MKISRKTMQQSPGRGYLDGQMLIAMPAMNDERFARAVIYVCAHS
                     TEGAMGIIVNHPAANIKFPDLLVQLEVIPAAERIQLPTRAGDVKVLKGGPVETGRGFV
                     LHSSDFFIENSTLPIDEGVCLTATLDILKAIARGKGPASAILALGYAGWAPGQLEHEI
                     QQNGWLHCAADTELIFGQDTDTKYEKALRKIGIDLGMLSSEAGHA"
     gene            complement(1872..>4396)
                     /locus_tag="VIY07_16310"
     CDS             complement(1872..>4396)
                     /locus_tag="VIY07_16310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY6383353.1"
                     /translation="PSTGDRPVRQESSTADIFRITLDPGTVITFVAELRTDKLPQIYL
                     WEPDAYKDKVNSFTLYYGIVIGIAGLLALFLTILFVVKGSIMFPAAAALGWAVLVYIG
                     IDFGFWGKVFDMSAGAERVWRACGEAILSATLLVFLFAYLNLSRWHVRYAHITIAWLA
                     ALAALVAVAVFDPAVAAGISRISLAGIALVGFALVIYLSTHGFDRAVLLIPTWLLLVA
                     WTSAAGLAVTGVVTNDIIGPALLGGLVLIVMLIGFTVMQHAFAGGITHGIVSDVERRA
                     LALTGAGDLIWDWDVSADKVFTSPETEHMLGMKRGSLEGPAATWLEVLHPLDRDRFRA
                     TLDGVVEQRRGRLTQDFRLRTADGNFLWFALKARPIVGSDGEVVRLVGTLTDVTEFKN
                     AEERLLFDAVHDNLTGLPNRELFIDRLEAALGFARADPQIRPSIVVIDLDRFKQVNDS
                     VGIAVGDSILLTIARRLSRLLKPQDTLSRLTGDQFAMIILSEREPARIVAFAETIRRT
                     LRAPIAFNDREIFLTASIGLALAENQTNRTDEVLKDAELAMYYAKRIGGDRIEIFKPA
                     MRSRKTDRLAMESELRRAIEREEIKVLYQPIVRLEDRAIAGFEALARWDHPKLGRLSP
                     AEFISIAEEIGLIVDLGLFVLDHTARHLAQWQAATRAREPVFASVNVSSRQLLRHDLI
                     QDLRAVLGRAALARGTLKLEITESLVMENPEHAAQILTRIKELGAGLSLDDFGTGHSS
                     LAYLQRFPFDTIKIDQSFVRTTPRGTRPVILRSIIALAHDLGMEVVAEGAETDSDAVE
                     LYQLGCEYAQGFAFGEPMSADGARDLLIDKPTRLRALKIASE"
BASE COUNT          900 a         1309 c         1354 g          833 t
ORIGIN      
        1 gcgccacctt tcggcctttg aaaagctcgt cagtggtctt ccagacggga ccttcggtgc
       61 tcatgacgcg gaatttggca tcaggcaatc gctcgccgac cttgataggc atgggtgtcc
      121 tctcgcgttg cggaaatcca agtttcttgg cccggtaatt acgccgtcgc cgccgattag
      181 tcgagacggc ccttgacctc aaatgcccgt tcgccggtga cgatggtgta ggtcaaatct
      241 atcgggccct tgggatcggt acccggtggt gagccgtcca tttcaaagct gaactgggcc
      301 cgtccggctg gcgccggctt gacaggtttc ggaatgggca aggcccaccg aggtgttggc
      361 ccctctacaa acaagtccac cgtttggccg gcaggcgcgg caaggtcaac ggtgaccatc
      421 ggctttgtcc cgctattgac gcggcgcgcg ttgagcccgg cctgcgcggc actgacttgt
      481 ctcggcacgc gcccttctgc cgcactcaat tcggcattgt gcgcgctgtt gccggagcca
      541 agcgtcaact cagcgcgccc ctccaccgga acgcagactt tctcgcagac cgcatagtca
      601 accttcaatc gtaacttgac aggtttgccc ggctgctggg gcgataacag gaccggaaag
      661 acgaccctct ctttgtagcc aagggtttgg cccgtctcgt ccttaaacag gcgcggagcg
      721 gggtagagca ccgttgcgga tttcagattt tccgagttcg aaaaatcgaa ctgtggcggc
      781 acgccggaat cgccgggata gcgccagtag gtcttccaac ccggctgcat cttgatctcg
      841 atgcccgcgc gcaagggcgc atcagcattc ttgttggtgc cggcaataat tcggaccgcg
      901 gaccggatgt cctcgctcca tggtgattcg tcggcggcat gccccgacgt tgccgaaaag
      961 gcggcgattc ccaatgcgat cagcgccgta agcggggatc tgtgaatatt ggccattgcc
     1021 gaggctctaa tcggtaaccg catgctgcgc cactgaattc atcgtgagca agcgttgaac
     1081 acgatcccgg cggctggccg ccacaattat ctggtccaat atgattgtga agggttgaac
     1141 tttcgcccgc aacgttcgtt tgcaaaggcg ggtcgttcag gtaacctttt gccatgaaga
     1201 tttcacgcaa gacgatgcag caaagccccg ggcgaggtta tctcgatggg caaatgctga
     1261 tcgccatgcc cgcgatgaac gacgagcggt tcgcgcgggc cgtgatctac gtctgtgccc
     1321 attccaccga aggtgcgatg ggcatcatcg tcaatcatcc ggcggccaat atcaaatttc
     1381 ccgacctgct ggtacagctt gaggtgattc cggccgccga gcggatccag ctgccgaccc
     1441 gcgccggcga tgtgaaggtt ctcaagggcg gcccggtcga gaccgggcgc ggcttcgtgt
     1501 tgcactcgtc cgatttcttt atcgagaatt ccacattgcc catcgacgag ggcgtctgcc
     1561 ttacggctac gctcgacatt ctcaaggcga tcgcgcgagg caaaggaccg gcgagcgcta
     1621 tccttgcgct ggggtacgcc ggatgggccc ccggacaact cgagcacgag atccagcaaa
     1681 acggatggct tcactgcgcg gccgacacgg aattgatttt cggtcaggat acagacacga
     1741 agtatgaaaa ggccttgcgc aagatcggca ttgatctggg gatgctgtcg agcgaggccg
     1801 gccacgcatg aaatttcggc gtgcggattg tcatggccgt gctggtcccg gccattttcc
     1861 atttagagat attactcgga agcaatcttg agagcgcgca ggcgcgtcgg cttgtcgatc
     1921 agcagatcac gggcaccgtc ggcgctcatg ggctcgccaa aagcaaagcc ctgcgcgtat
     1981 tcgcaaccaa gctggtagag ctcgacggca tcggagtccg tttcggcgcc ttcggctacg
     2041 acttccatgc cgagatcatg cgcgagcgcg atgatcgagc gcaggatcac cggccgcgtt
     2101 ccgcgtggcg tggtccgcac gaaggactga tcgatcttga tcgtgtcgaa ggggaagcgc
     2161 tgcaggtaag caagtgagga atggccggta ccgaagtcgt cgagcgacag gcctgcgccg
     2221 agttccttga tgcgggtcaa aatctgcgct gcgtgctccg gattttccat gaccagcgac
     2281 tcggtaatct cgagcttgag agtgcccctg gcgagcgcgg cgcgtcccaa tacggcgcgc
     2341 aagtcctgga tcaagtcgtg cctcagcaat tgccgcgagg atacgttcac actggcaaac
     2401 accggctcgc gcgcacgcgt ggccgcctgc cactgggcca ggtgccgcgc ggtatggtcg
     2461 agaacgaaaa ggccaagatc gacgatcagc ccgatttctt cggcaattga aatgaactcc
     2521 gccggcgata gtcgcccaag cttgggatga tcccagcgcg ccagcgcctc gaagcctgca
     2581 attgcgcggt cttccagccg gacgatcggc tgatagagca ccttgatttc ctcgcgctcg
     2641 atggcgcgac gcaattccga ttccattgcc aggcgatcgg tcttgcgcga acgcatcgcc
     2701 ggcttgaaga tttcgatgcg atccccgccg atgcgctttg cgtaatacat tgcaagctca
     2761 gcgtccttga gcacctcgtc agtgcgattt gtctggtttt cggcaagcgc cagcccaatg
     2821 gaagccgtga ggaaaatctc gcggtcattg aacgctattg gcgcccgcag ggtccgccgg
     2881 atcgtttcgg cgaaagccac gatgcgcgct ggctcgcgtt ccgacaggat gatcatcgcg
     2941 aactggtcgc cggtcagccg cgacagggtg tcctgcggct tcagcagacg tgatagacgg
     3001 cgcgcgatgg tgagcaggat cgaatccccg accgcgatgc cgaccgaatc gttgacttgc
     3061 ttgaaccggt cgagatcgat caccacgatc gacggacgga tttgcggatc ggcgcgagca
     3121 aagccgagag cggcctcaag gcgatctatg aacagctcgc ggttgggcag gccggtgagg
     3181 ttgtcgtgaa cggcgtcaaa aagcagccgt tcctcggcgt tcttgaactc cgtcacgtcg
     3241 gtaagcgtac cgacgagcct cacgacttct ccgtctgagc ccacgatcgg acgcgccttg
     3301 agggcgaacc agagaaaatt tccgtcggcg gtgcgcagtc tgaagtcttg cgtgagtcgg
     3361 ccgcggcgct gttcgaccac gccatcaagc gtagcccgga agcgatcgcg gtcgagcgga
     3421 tgcaagactt cgagccaggt cgcagccggt ccttcgagcg agccgcgctt catgccgagc
     3481 atgtgctcgg tctccgggct ggtaaacacc ttgtctgccg atacgtccca gtcccagatc
     3541 aggtcaccgg cgccggtcag cgcaagcgcg cgacgttcca cgtccgaaac gatgccatgc
     3601 gtgatgccgc ccgcaaatgc atgctgcatg accgtgaatc cgatcagcat cacgatcagc
     3661 accaggccgc caagcagcgc cgggccgatg atgtcgttcg tcaccacccc ggtcacggcg
     3721 aggccggcgg ctgacgtcca tgccaccagc aaaagccagg tcggaatcag cagcacagcg
     3781 cggtcgaagc cgtgcgtgga aagatagata acgagggcaa agccaaccaa agcgatgccg
     3841 gcaagcgata tccgggaaat tccggcggcg actgcagggt cgaatacggc aacggcaacg
     3901 agagccgcaa gggctgcaag ccaagcgatg gtgatatggg cgtagcgcac atgccagcgc
     3961 gacaaattca gataggcgaa cagaaaaacc agcagcgtgg ccgaaaggat tgcctcgccg
     4021 caggcgcgcc aaacgcgctc ggctcctgcc gacatgtcga acactttgcc ccagaagccg
     4081 aagtcgatgc cgatgtagac caatactgcc cagccaagtg cggccgcggc cgggaacatg
     4141 atcgagccct tgaccacgaa cagaatggtc agaaaaagcg cgagcagacc tgcgatgccg
     4201 atgacgatgc catagtaaag ggtgaaggag ttgaccttgt ccttgtaggc atccggttcc
     4261 caaagataga tttgcggcaa cttgtcggtt cgcaattccg caacaaaggt tatcacggtg
     4321 cccggatcga gcgtgatgcg gaaaatgtcc gccgtcgaac tttcctggcg cacagggcga
     4381 tcgccggtcg agggcg
//
LOCUS       DATDHO010000838         7670 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_339342, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000838 DATDHO010000000
VERSION     DATDHO010000838.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7670
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339342"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..89)
                     /locus_tag="VIY07_16315"
     CDS             complement(<1..89)
                     /locus_tag="VIY07_16315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012047116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsnC family protein"
                     /protein_id="HEY6383354.1"
                     /translation="MDAIDRKILAVVQQDASLSVAEIGQRVGLS"
     gene            249..1235
                     /locus_tag="VIY07_16320"
     CDS             249..1235
                     /locus_tag="VIY07_16320"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEY6383355.1"
                     /translation="MKTLFRFRLSDALRRLGAAILFSAALAASVAGAHAEPLVSVEWL
                     NSHRADPDLVVLDIRSAIDGGGAQAYAAGHIPGSVHSDYDKAGWRVTRNNVPFMVPTV
                     PELEKLIGDLGIDEATHVVVVPAGVNVLDFGSAARTYWTLKYVGVKNVSILDGGIAAW
                     RQAGLPLESGVKPPSPKIFSATVDNSILALANDVETIEGKGGATLVDARPASFFSGKE
                     KAPASQAYGHIPGALNIDSARFYDNQTNRLKPKAELASIANAVPAGPAVSYCNTGHWA
                     ATDWFVLHELLERKDTRLYAGSMVEWTSKPNRPVESTRTKWDDLKKALGLGS"
     gene            1255..2403
                     /locus_tag="VIY07_16325"
     CDS             1255..2403
                     /locus_tag="VIY07_16325"
                     /inference="COORDINATES: protein motif:HMM:NF016064.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HEY6383356.1"
                     /translation="MTTATLAAPDQGAAVRIDRLFLGLALASASILIAVVLLDHQPAS
                     AALIVGGFGLGVAFLKAEFSYTASWRRFLTRGEAGGLLGGLIVIAICACVVVPVAALS
                     PKYGGAIAPLGPSLIIGAFVFAVGMQLANGCGSGTLYTVGGGSGRMLVALLFFVIGSV
                     LGSLSLPAFLTLGGIDPVLASDYLGAWGGLALTLGSIATAGACVIAVARKRGANFMPS
                     RRYIIGGVIIGLLCVAVFAAGGHPWSVTFAFTVWGAKAATALGFDLSHAAFWQWPGPK
                     RALAESVLSDTSSLTDLGMMFGAMAAAAASKPFATGPWPPLKSLAAAAIGGLLMGWGA
                     RLGFGCNIGAFVGGVASGSLHGWLWFLAALPGCLVGIRLRPLFGLSRE"
     gene            2407..2559
                     /locus_tag="VIY07_16330"
     CDS             2407..2559
                     /locus_tag="VIY07_16330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383357.1"
                     /translation="MRTVYIAVVVLGVAAILVDHLSSPSTGRALSPEDFAGACAPCGA
                     PCPSKK"
     gene            complement(2565..3491)
                     /locus_tag="VIY07_16335"
     CDS             complement(2565..3491)
                     /locus_tag="VIY07_16335"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HEY6383358.1"
                     /translation="MTERRAEKPKVLCAGGAVEDIVMRVDRFPEPGTKVQASEFLITS
                     GGQSGNAAVAIARLGGQVSFAGPLGDEDDEFASRIVKTLLQEKIDCTGAVRVPGAISS
                     VSLILVDAAGEKMITTRRDQGLGEVAPQNAERTVSAVDAVLLDNRYPNFVIPICNAAR
                     ARGIPRVLDFDKAAPLDDPLLTGCSHVICSSEALRGSTGLDDLPAALKKLGQHFSGFL
                     AVTDGDHGVYWIDNGEIRHMPAFKVNAIDTLGAGDVFHGAFTFRLVETGDVVDSMRFA
                     SAAAAIKCTRFGGLMGAATRGEVDDFLKQHSR"
     gene            complement(3484..4434)
                     /gene="nudC"
                     /locus_tag="VIY07_16340"
     CDS             complement(3484..4434)
                     /gene="nudC"
                     /locus_tag="VIY07_16340"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000210 - NAD+ diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HEY6383359.1"
                     /translation="MFSRPDLGPKPRLGYSGSRIERAAELRANDVAVGAFARVPGAGA
                     YLIGGEWIVMRRGAPLNEPLFTLTEAEAFGPAVETIFLGLLDGAPRFGHGLPPQTAEA
                     LKSRDDLHVTDLRSVAVQGLVAADHLPPIAEAKAVLHWHARHRFCSNCGAATGLVCGG
                     WRRDCPQCKAEHFPRTDPVVIMLASDGERCLLGRSPRFVPTMWSCLAGYVEPGESIED
                     AVHRETREEAGITCGKVVYFASQPWPFPTSLMIGCHARALTHDIVVDREELEDARWFS
                     KSEIEAMLMRKHPQGLTTPPPVAIAHHIIRAWLEDEINFD"
     gene            complement(4464..6098)
                     /locus_tag="VIY07_16345"
     CDS             complement(4464..6098)
                     /locus_tag="VIY07_16345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383360.1"
                     /translation="MSAPEPILSVRDLSVAFGRGSREVLAVDRISFDVGKGETVALVG
                     ESGSGKSVTALSVMKLLPYPAAHHPSGSIKFEGRELLSMPEQEIREVRGNDIAIIFQE
                     PMTSLNPLHTIEKQIREILLLHHGLEGEAARTRIIELLSQVGIPDPAGRLGSYPHQLS
                     GGQRQRVMIAMALANKPDLLIADEPTTALDVTVQAQILKLLKDTQTQLGMSMLFITHD
                     LGIVRKLADRVCVMQRGKIVEQGPVERVFTAPEHPYTRALLAAEPKPDPAPPRPEAPI
                     VVETKELKVWFPVKRGVLRKVVGHIKAVDGVSIELRKGETLGVVGESGSGKTTLGLAI
                     LRLISSTGPIVFLGNSIENLKFKQMRPFRHDMQIVFQDPYGSLSPRMSVSDIIEEGLW
                     VHHPNLSKATREQRVVDALTDVGLDPETRHRYPHEFSGGQRQRIAVARALVLEPTFIV
                     LDEPTSALDMLIQSQMVDLLRDLQKRHDLTYMFISHDLRVVAALSSRLLVLRHGKMVE
                     EGAAADLFKAPKTDYTRALFAAAFKLETAPEGVVSQ"
     gene            complement(6095..7237)
                     /locus_tag="VIY07_16350"
     CDS             complement(6095..7237)
                     /locus_tag="VIY07_16350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383361.1"
                     /translation="MGLAAPPTGKAISISPLNKRRWENFKANRRGYWSLWIFLTLFVV
                     SLFAEFIANDKPIFIFVNGRPFFPAVITYPDTAFAKEHDPNLFGTAADFRDDYLMDLI
                     KKEGGIVVWPPVRFSYNTQVSKPPSPFPSKPTWLLTQKDCEFAAAHGFAKCDEVETNW
                     LGTDDGGRDVVARLIYGFRISVLFGLALTIISSIIGVAAGAVQGYFGGWTDLLFQRFI
                     EIWTSIPSLYLLLIISSVLVPGFFVLLGILLLFSWVSLVGLVRAEFLRGRNFEYIQAA
                     RALGVSNTVIIFRHLLPNAMVATMTFLPFILSSSVMTLTALDFLGFGLPPGSPSLGEL
                     LSQGKANVQAPWLGFTGFFSIAFMLSLLIFIGEAVRDAFDPRKTFR"
     gene            complement(7290..>7670)
                     /locus_tag="VIY07_16355"
     CDS             complement(7290..>7670)
                     /locus_tag="VIY07_16355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEY6383362.1"
                     /translation="ATMTLLTKNSFLEEIRKQYVLTARAKGCSNNQVLYGHVFRNAML
                     IVIAGFPSAFVHAFFTGALLIETIFSLDGLGLLGFESVLNRDYPVVFATLYIFSLIGV
                     IVNLISDLTYTWIDPRIDFETREV"
BASE COUNT         1544 a         2293 c         2321 g         1512 t
ORIGIN      
        1 gacaatccga cgcgttggcc aatctcggct accgatagcg aagcgtcttg ttgcacaacg
       61 gcgaggattt ttcggtcgat ggcgtccatt ctcttttgag gctcctgcct ggcacgactg
      121 tcccacacac gataacaaat ttagaatata attcttattt catgccgaca tctgtcataa
      181 cagagaaaaa tattctattt caagcgtaat ctttggcctc acagaggctg cctagtgaaa
      241 cactggccat gaaaacatta ttccgctttc gcctgtccga cgccttgcga cgccttggcg
      301 ccgccattct gttcagcgcc gcgctcgccg cttcggtggc gggggcgcac gccgaaccgc
      361 ttgtgagcgt ggagtggctt aacagccatc gtgccgatcc cgatctggtc gtcctcgata
      421 tccgttccgc aatagacggt ggcggggcac aagcctacgc ggccggtcac attcccggca
      481 gcgtccacag cgactacgac aaggcaggtt ggcgcgtcac gcgcaacaac gtgcctttca
      541 tggttccgac ggtgccggag cttgaaaagc tgatcggcga tcttggcatc gacgaagcga
      601 cacacgttgt ggtggtgccg gcaggagtaa acgttctgga tttcggttca gctgcgcgca
      661 cctactggac gctgaaatat gtcggggtga aaaatgtttc gatcctcgac ggcggcatcg
      721 ccgcctggcg gcaggcaggt ttgcctctcg agagcggtgt gaagccgccg tcaccgaaaa
      781 ttttctccgc gactgtcgac aacagcattc tcgccttggc caacgatgtc gagacgatcg
      841 aaggcaaagg tggcgctacg ctcgtcgatg cgcggccggc gtcttttttc tccggcaagg
      901 agaaggctcc cgcttcccag gcctacggtc acatccccgg agctttgaat atagacagcg
      961 cgcggttcta cgataaccag acaaaccggc tgaagcccaa ggcggagctt gcatccattg
     1021 cgaacgcggt gccagcaggg cccgcagtga gctattgcaa cacgggccac tgggcggcga
     1081 ccgactggtt cgttctgcac gaactgctcg aacgaaagga tacgaggctc tatgccggat
     1141 cgatggtcga gtggaccagc aagcccaatc ggccggttga atccacgcgc acgaagtggg
     1201 acgatctgaa gaaggccttg ggcctcggtt cctgatccgc gccctggagt ttccatgacg
     1261 accgctacct tggccgcgcc cgatcagggc gcggccgttc gcatcgaccg cttgttcctc
     1321 gggcttgcgc tcgcatccgc ttcgattctg atcgcggtgg tgctgctcga tcatcagcca
     1381 gcctctgccg cattgatcgt tggcgggttt ggcctcggcg tcgcgtttct caaggcagag
     1441 tttagttata cggcttcctg gcggcggttc ctgacgcgtg gagaggcggg tggtctcctc
     1501 ggcggcctga tcgtcatcgc catctgcgcc tgcgtcgtgg tgccggtggc tgccctgagc
     1561 ccgaaatacg gcggagccat cgcgccgctg ggcccgtcgc tgatcatcgg tgcattcgtc
     1621 tttgccgtcg gaatgcagct tgccaatggc tgcggatccg gaacgctcta caccgtcggc
     1681 ggcggatcgg gacgcatgct ggtggcattg ttgttctttg tgatcggcag cgttcttggc
     1741 agtctctcgt tgccggcgtt tcttaccctg ggcggaatag atccggtgct ggcgtcggat
     1801 tatctcggcg cctggggcgg gttggcactc acgcttggca gcattgccac tgcgggggcg
     1861 tgcgtcatcg ccgtagcccg caagcgcggc gccaatttca tgccgtcgcg tcggtatatc
     1921 atcggcggcg ttattatcgg actgctgtgc gtcgcggttt ttgccgccgg cggtcaccca
     1981 tggagcgtca cgttcgcctt taccgtctgg ggcgcaaaag ccgcaacggc acttggattc
     2041 gatctgtcgc acgcggcttt ctggcaatgg cccgggccca agcgggcgct tgcggaatcg
     2101 gtgctgtccg acacctcgag cctcaccgat ctcggaatga tgtttggcgc aatggccgcg
     2161 gcagcagcga gcaagccgtt tgcaactggt ccgtggccgc cgctgaagtc actggcagca
     2221 gcagcgattg gcggtttgtt gatgggctgg ggcgcgcgcc tcggctttgg ctgcaacatc
     2281 ggcgcgtttg ttggcggcgt tgcctctgga tcgctgcatg gctggttgtg gtttttggcc
     2341 gcattgcccg ggtgcctggt tggcattcga ttgcgtccgc tgttcggcct gtcgcgggag
     2401 tagcggatgc gtaccgtcta catcgcggtg gtcgtgcttg gcgttgcagc cattttggtc
     2461 gaccacttgt cgagcccttc gaccggccgc gccctgtcgc ctgaagactt cgccggcgcg
     2521 tgcgccccct gcggcgcacc atgtccgtca aagaaatagg ccgctcagcg agagtgctgc
     2581 ttcaggaaat cgtcgacttc gccgcgcgtc gctgcaccca tcaagccgcc aaatcgcgtg
     2641 cacttgatcg ccgctgcggc gctggcaaaa cgcatggaat ccacgacgtc gccggtttcc
     2701 accagccgga aggtaaaagc gccgtggaac acgtctcccg ctcccagcgt atcgatggcg
     2761 ttcaccttga atgccggcat gtggcggatc tcgccgttgt cgatccaata gacgccatga
     2821 tcgccgtcgg tgactgcaag aaagccgctg aaatgttgtc caagcttttt gagcgcagcg
     2881 ggcaaatcgt cgagcccggt gctgccacgc agcgcttcgg atgaacagat cacgtggctg
     2941 catcccgtca gcagcggatc gtcgagcggt gccgccttgt cgaaatcgag aacgcgtggg
     3001 attccgcgtg ccctggcggc attgcagatc ggaatgacga agttcggata ccggttatcg
     3061 agcaacacag cgtcgactgc ggagaccgtg cgctcggcgt tctgcggcgc gacctcgcct
     3121 agaccctgat cgcggcgcgt tgtgatcatc ttctctccgg cggcgtcgac caagatcagc
     3181 gataccgagg agattgcgcc cggcacgcgg accgctccgg tacaatcgat cttctcctgc
     3241 agcagcgtct tgacgatacg gctcgcgaat tcgtcgtctt catcgcccag cgggccggcg
     3301 aagctcacct gcccgcccag gcgggcgatc gcaacagcag cattgccaga ttgcccgccg
     3361 gaggtgatca ggaattccga tgcctggacc tttgtgcccg gttcgggaaa ccggtcaacg
     3421 cgcataacga tgtcttccac ggcgccccca gcgcaaagga cttttggttt ttccgctctt
     3481 cgctcagtca aagtttatct cgtcttctag ccaggcgcgg atgatgtgat gcgcaatcgc
     3541 gacgggagga ggcgtggtca ggccctgcgg atgcttgcgc atgagcatcg cctcgatctc
     3601 gctcttgctg aaccagcggg catcctccag ttcctcccgg tcaaccacga tgtcgtgcgt
     3661 caacgcccgg gcgtggcaac cgatcatcag tgaagtcgga aaaggccatg gttgcgaggc
     3721 aaaataaacc acctttccgc aggtaatgcc cgcttcctcg cgcgtttcgc ggtgcaccgc
     3781 atcctcgatc gattcacccg gctcaacgta tcctgcaaga cacgaccaca tggtcggtac
     3841 aaagcggggc gagcgcccca gcagacaccg ctcgccgtcg ctcgccagca tgattaccac
     3901 gggatcggtg cgcggaaagt gctcggcctt gcactgcggg cagtcgcgac gccagccgcc
     3961 acagacaagt cctgtcgcag cgccacagtt tgagcaaaac cgatggcgcg catgccagtg
     4021 cagcacggcc ttggcttccg cgatcggtgg cagatgatcg gcggcgacga gaccttgcac
     4081 agcgaccgag cgaaggtccg tcacgtgcag atcatcgcgc gacttcagcg cctctgccgt
     4141 ctgcggaggg aggccgtggc cgaaacgcgg cgctccgtct agcaggccaa gaaatatggt
     4201 ttcgaccgca ggaccgaatg cctcagcctc cgtcaatgtg aacaaaggct cgttgagagg
     4261 cgcgcctctc ctcatcacga tccactcgcc accgatcaga taggctcccg cgccgggaac
     4321 gcgggcaaat gcgccaacgg caacgtcatt ggctcgaagc tccgcagccc gctctatgcg
     4381 gctgccggag tatccgagac ggggtttggg gccgagatcg ggacgcgaaa acatgcgggc
     4441 ggcaaactag caggcataag ctcttattgc gacacaacac cctctggcgc cgtttccagc
     4501 ttgaatgcgg cggcaaacaa tgcgcgcgta tagtcagtct taggcgcctt gaaaaggtcg
     4561 gcggctgcgc cttcttccac catcttgcca tggcgcagca ccagaagtcg gctcgacaac
     4621 gccgccacga cccgcagatc gtgtgagata aacatgtaag tgagatcgtg ccgcttttgc
     4681 aggtcacgca gcaggtcgac catctgtgac tgtataagca tgtccagggc gctggtcggc
     4741 tcgtcaagaa cgatgaaggt cggctcaagc acgagcgcgc gggcgaccgc gatgcgttgg
     4801 cgctgccctc ccgagaactc gtgcggatag cgatgccgtg tctcggggtc gagcccgacg
     4861 tcggtcagcg catccacaac gcgctgctcg cgcgtcgcct tagaaaggtt cgggtgatgc
     4921 acccacagcc cctcttcaat gatgtccgac accgacatgc gcggagacaa ggagccgtaa
     4981 gggtcctgaa acacgatctg catgtcatgc cggaaaggac gcatctgctt gaacttgaga
     5041 ttttcgatgg aatttcccag gaacacgatc ggtccggtcg aggagatcag tcgcagaata
     5101 gcgagaccga gagtcgtttt gcccgagccc gattcgccga cgaccccgag cgtttcgccc
     5161 tttcgcaatt caatgctcac gccgtcgacc gccttgatgt ggccgacgac cttgcgcaag
     5221 acgccgcgct tgaccggaaa ccagaccttt agttctttcg tctcgacaac aataggagcc
     5281 tccggacgtg gtggcgccgg atcgggcttg ggctccgcag ccagcaatgc gcgggtgtaa
     5341 ggatgttcgg gcgcggtgaa aacgcgctcc accggtccct gctcgacaat ctttccgcgc
     5401 tgcataacgc agaccctatc ggcaagcttg cgcacgatcc caagatcgtg cgtgataaac
     5461 agcatcgaca tgccgagctg tgtctgggtg tccttcaaca gcttcaggat ttgagcctgc
     5521 acggtgacat caagcgcggt ggtgggttcg tcggcgatca aaaggtccgg cttgttggcg
     5581 agcgccatcg cgatcatcac gcgttgacgc tggccgccgg acagttggtg cgggtagctg
     5641 ccgagccgcc cggccggatc gggtatgccg acctggctga gcaactcgat aatccgtgtt
     5701 ctggcagctt cgccttcaag gccatgatgt aacagcagaa tttcacggat ctgtttttca
     5761 attgtgtgca acggattaag cgaagtcatc ggttcctgaa agatgatcgc gatatcattt
     5821 ccgcgcacct cgcgaatctc ttgctccggc atgctcaaca gttcgcggcc ctcgaacttg
     5881 atcgagcccg acggatgatg cgcggccgga tacggcaaca acttcatcac cgagagcgca
     5941 gtcaccgact tgccggagcc ggattcgccc acaagcgcca ccgtctcgcc tttgccgacg
     6001 tcgaacgaga tgcggtcgac cgccagcacc tcgcggctac cgcgtccaaa ggcgaccgac
     6061 aagtcgcgga cggagagaat gggctcaggc gcgctcatcg gaaggtcttc cttggatcga
     6121 aagcgtcgcg cacggcctcg ccgataaaga tcaacaacga cagcatgaac gcgatactga
     6181 aaaagcccgt aaagccgagc cacggtgcct gcacgtttgc ttttccttga gacaacagtt
     6241 cgccgagcga cggcgagccg ggaggcaaac cgaagccaag gaaatcaagc gcggtcaacg
     6301 tcatcaccga cgacgacagg atgaatggca aaaaagtcat ggtcgcgacc atcgcattgg
     6361 gcagcagatg gcggaaaatg atgaccgtat tcgacacgcc gagagcgcgc gctgcctgga
     6421 tgtattcgaa attccgcccg cgcaggaatt cagcacgcac gaggccgacc agcgacaccc
     6481 aggagaacag cagcaatatg cccagcaaca caaaaaatcc gggcaccaga acagaggaaa
     6541 tgatcaggag aagataaagg gaaggaatcg aagtccagat ctcaataaag cgttgaaaca
     6601 ggaggtcggt ccagccaccg aaatatcctt gtacggcgcc ggcggcgacg ccgattatcg
     6661 aggagatgat agtcagtgcc aaaccgaaca ggaccgagat ccggaaaccg tagatcaggc
     6721 gagccaccac gtcgcgaccg ccgtcatcgg tgccaagcca gttggtttcc acttcgtcgc
     6781 acttcgcaaa gccatgagcg gcggcgaatt cgcagtcctt ttgcgtgagc agccaggtcg
     6841 gcttggaagg aaacggcgat ggcggcttgc tgacctgggt attgtaggag aaacgcacgg
     6901 gcggccagac gactatgcct ccctcttttt taatcagatc catcaggtaa tcgtcacgaa
     6961 agtcggccgc cgtgccgaac aagttcggat cgtgctcctt cgcaaaagcc gtgtcgggat
     7021 acgtgatgac tgccgggaaa aacggccgcc cgttgacgaa gataaagata ggtttgtcgt
     7081 tggcgataaa ttcagcaaac agcgacacga cgaacaacgt cagaaaaatc cagagcgacc
     7141 agtagccacg gcgattggcc ttgaaatttt cccaccgacg cttgttgagt ggtgaaatac
     7201 ttatggcttt cccggtcggc ggcgccgcca gccccatggg cgacactgct tcggtttcag
     7261 gcggcttgat gccggtccgt gcgtccactt cagacctccc gcgtctcgaa gtcgatgcgc
     7321 ggatcgatcc atgtgtatgt caggtcggag atcaggttca cgatcacgcc gatgagcgag
     7381 aagatgtaaa gggtggcgaa cacgaccgga taatcgcggt tgagaacgct ctcgaagcca
     7441 agcagcccga ggccgtcgag cgagaaaatg gtttcgatca gcaaggcccc tgtaaagaat
     7501 gcatgcacga atgccgaggg aaagccggca ataacgatga gcatggcatt gcggaaaacg
     7561 tgcccgtaga gcacctgatt attgctgcag cccttggcgc gcgcggtgag cacatattgc
     7621 ttgcgaattt cctcgaggaa ggaattcttt gtcagcaatg tcatcgtagc
//
LOCUS       DATDHO010000839         8186 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_339362, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000839 DATDHO010000000
VERSION     DATDHO010000839.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8186)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8186)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8186
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339362"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(42..413)
                     /locus_tag="VIY07_16360"
     CDS             complement(42..413)
                     /locus_tag="VIY07_16360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEY6383363.1"
                     /translation="MSERLKPVPLVFWRSAAGREPVRDWLRALPREDKRIIGRDIAKV
                     QFGWPIGLPLCRALRSGLWEVRTSLPSKREARVFIGFHEGMLIALHAVIKKARKAPAE
                     DLALARERLKEMQSWREGTRT"
     gene            609..815
                     /locus_tag="VIY07_16365"
     CDS             609..815
                     /locus_tag="VIY07_16365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383364.1"
                     /translation="MARYTPEFLAALRHSYEKTHQSGRSIARDFGLPNTTLRGIAMKR
                     GWVRPPEPVRDLEPAMRLQLQPPR"
     gene            872..1132
                     /locus_tag="VIY07_16370"
     CDS             872..1132
                     /locus_tag="VIY07_16370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383365.1"
                     /translation="MPARILVVRYTPRLLTALRHRYEQTRQPARSIACDFGVSDRTLR
                     RIAAQRGWTRPGQPRRDLEPAQRLLEEATALERQVFGIKSLE"
     gene            complement(1179..2096)
                     /locus_tag="VIY07_16375"
     CDS             complement(1179..2096)
                     /locus_tag="VIY07_16375"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEY6383366.1"
                     /translation="MKHVAVLMGGWSAEREVSLRSGKACADALERTGYRVSRVDVSRD
                     IGATLSALKPDAALNVLHGRPGEDGTLQGMLEVLGIPYTHSGVLASALAIQKEVAKTV
                     LKTAGVPVPGGRVAPRKEVAKRHLLPPPYVIKPVAEGSSVGVFIVREDHTHPPQELTR
                     ADWPFGDRILVEPYIPGKELTCAVMGEQALGVIEIVPTVKFYDYEAKYAPGGSRHLLP
                     APIPPAVYKEVQRLTLAAHQALGCRGVTRSDFRYDDSLDGATGLFCLEVNTQPGMTET
                     SLVPEMAQHAGISFDELVRWMVEDASLDR"
     gene            complement(2101..3015)
                     /gene="murB"
                     /locus_tag="VIY07_16380"
     CDS             complement(2101..3015)
                     /gene="murB"
                     /locus_tag="VIY07_16380"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEY6383367.1"
                     /translation="MSFPDLVPELKARMPELRGRLLANQPLGEFTWFRVGGPAQVFFM
                     PEDENDLAYLLRNLSTEIPVTVIGAGSNLIVRDGGVPGVVIRLGRGFNDVRIEEHRVT
                     AGTAMLDVMVARAAQAAGVAGLAFLSGIPGTIGGALRMNGGAYGGETKDVLLETRGID
                     RQGNLRTFSSGEMGFSYRHCSVPDDVIFTAAVLQGRAGEAEQIAGEMATIKKKREATQ
                     PRNRTGGSTFKNPPGHSAWKLVDEAGCRGLTIGGAQVSELHSNFLINLGSASAADIET
                     LGETVREKVKENSGIDLEWEIKRVGVKR"
     gene            complement(3012..4412)
                     /gene="murC"
                     /locus_tag="VIY07_16385"
     CDS             complement(3012..4412)
                     /gene="murC"
                     /locus_tag="VIY07_16385"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEY6383368.1"
                     /translation="MKLPRDIGPVHFVGIGGIGMSGIAEVLANLGYIVSGSDIADSAN
                     VKRLRDKGVKVAIGHKSENINGADVVVVSSAIKRDNSELVAARAKRLPVVRRAEMLAE
                     LMRLKSCVAIAGTHGKTTTTSLVASLLDAGGLDPTVINGGIINAYGTNARLGAGDWMV
                     VEADESDGTFLKLPADIAIITNIDPEHLDHFHTFDAVQDAFRAFVENVPFYGFAVMCT
                     DHPVVQTLVGKLEDRRILTYGENPQADVRLADLDHLNGQSRFSVLFSDRGGKVSHTID
                     NLTLPMPGRHNALNATAAVAVAHALGIKSEAIRNALANFGGVKRRFTRVGEWNGATII
                     DDYAHHPVEIAAVLRAARESTKGQVIAVMQPHRYTRLHDLFEQFCTCFNDADAVIIAP
                     VYPAGEQPIPGVDRDALVTGLRARGHKQAMALEGSESLAPLIKRMAKPGDYVVCLGAG
                     SITQWAYALPTELKAL"
     gene            complement(4507..5601)
                     /gene="murG"
                     /locus_tag="VIY07_16390"
     CDS             complement(4507..5601)
                     /gene="murG"
                     /locus_tag="VIY07_16390"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEY6383369.1"
                     /translation="MAASGTPLVLLAAGGTGGHLFPAEALATALGKRRVTVELATDHR
                     AAHFEFPARAVHLIPSATVRGRDPISLARTATLLALGTAKAWSLLGRMRPGIVVGFGG
                     YPTVPPILAASLRGIPTVLHEQNGVMGRANRFLAPRVTAIATGFPKLKNLNPQWQSKT
                     TFTGNPLRPQVLAAAHSPYAASNERVRLLVFGGSQGAHVMAEIVPSAIGSLNPDLRAR
                     LSIVQQTRAEDLDAVRSAYSSLEVAAELAPFFSDLPARMAAAHLVISRSGASTVAELS
                     AIGRPAILVPLPHALDQDQFANAGILQDTGGAIRIEQRNFTPERLATEITALVQDPSR
                     LSGMARAAQAAGTADAAERLAELVLKVAEK"
     gene            complement(5601..6749)
                     /gene="ftsW"
                     /locus_tag="VIY07_16395"
     CDS             complement(5601..6749)
                     /gene="ftsW"
                     /locus_tag="VIY07_16395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HEY6383370.1"
                     /translation="MLSRAQRTPIGEWWWTVDRLTLAAIGALMLAGVVLSLAASPPVA
                     ARLGLEPFFFVNRHIIYLLPAIAVMLTVSFLSPRQIRRLSLIVFVLSLILVAATPHFG
                     PEIKGARRWLVLLGVNIQPSEFLKPAFVIIVAWLFGESARRPDMPANTFSLVLLLVVI
                     ALLVLQPDFGQTMLIAVVWSALFFMAGMRLVWVAGIAGLAGIGLLSAYYTVPHVARRI
                     QRFLDPGSGDTFNIDIATESFVRGGWFGKGPGEGTVKRILPESHTDFVFAVAAEEFGV
                     ALCLALVAIFAFIVIRMLIRAMRNDDPFARFAAAGLTILFATQSTINMAVNLHLMPAK
                     GMTLPFISYGGSSMISLAYAMGMLLALTREQPRAEMISPNALVAGSRV"
     gene            complement(6786..>8186)
                     /gene="murD"
                     /locus_tag="VIY07_16400"
     CDS             complement(6786..>8186)
                     /gene="murD"
                     /locus_tag="VIY07_16400"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEY6383371.1"
                     /translation="ITTFSGRKVAVFGLGSSGLLAARALKEGGADVVVFDDDGKKTAE
                     AQAAGLKVQDLHNVEWAKISALLLTPGVPLTHPEPHWTVLLAREANVEVIGDIELFCR
                     ERAKAGRDCPLIAITGTNGKSTTTALTAHLLKSAGRDAQMGGNIGVPVLALEPFEPRR
                     AYVLEVSSYQIDLAPSLKPTVGVLLNVSEDHIDRHGSIENYAAIKERVPANIEQGGTA
                     VIDVDDVYTRTAADRIERAGKNVVRVSVVSSLADGYFAEGSHILRAARGKSHPVAELA
                     GIGSLRGLHNAQNAACAVAACIALGIDPPSIQKGLGSFPGLAHRMQQVGHKGNVLFVN
                     DSKATNADSAAKALASFHDIFWIAGGKPKTGGIDSLAEFFPRIRKTYLIGEAAGEFAK
                     TLEGRVPYEISRILPTAVEAAARDATSSGLREPVVLLSPACASFDQYPNFEVRGKAFT
                     DIVQALPGVTATVNAS"
BASE COUNT         1655 a         2567 c         2432 g         1532 t
ORIGIN      
        1 gcgaagcgct tcctcgttta gccagctctc aaagctcgat cctatgtgcg ggttccttct
       61 cgccatgact gcatctcctt taatctttct ctcgccaatg ccaaatcctc tgccggagct
      121 ttgcgcgctt tcttgatgac ggcatgcagc gcgatcagca tcccctcgtg aaatccgata
      181 aagacccgcg cctcgcgttt gcttggcagc gacgtgcgga cttcccacaa gccgctgcgc
      241 agggcacggc agagcggtaa tccgatcggc cagccgaatt gcaccttggc gatatcgcgc
      301 ccgatgatcc gcttgtcctc gcggggcaac gcgcgcagcc aatcgcggac cggctcacgg
      361 cccgctgccg agcgccagaa cacaagaggg acgggcttca ggcgctccga cattccaaac
      421 tatgtatcaa aatagataca tacaagctat ttgtaaagat gcagcttatg aatatattcc
      481 ttgacagcgc gatattgcgt cgctagggat aacaccgtgg cttggtgcgt ctctatgtgc
      541 ttgagccgct catatcccct cccaaaacct gcctgctccc ctcccaaaac ctgcctgccg
      601 agaatcccat ggcgcgatat acgcccgaat ttctcgccgc cttgcggcat agctacgaaa
      661 agacccacca gtcggggcgc tcgatcgcgc gcgacttcgg cctgcccaat actaccttgc
      721 gcggcatcgc aatgaagcgg ggatgggtgc gtccgccgga gccagtgcgc gatctcgagc
      781 ccgccatgcg tctgcagcta cagccaccgc gctgaagcgg ggctcggtca acgagcccgg
      841 tgaagccggg cgcatactcg cgaacgaaac aatgccagca cgaattctcg tagtgcgcta
      901 caccccccgg ctactgaccg cgttgcggca ccgctacgaa caaacgcggc agcctgcgcg
      961 ctcgattgcg tgcgatttcg gcgtcagcga tcgcaccctg cggcgcatcg cggcgcagag
     1021 aggatggacg cggccggggc agccgcgacg cgatcttgag cccgcgcagc ggctacttga
     1081 agaagcgacc gcgctggagc gccaggtctt tggaatcaag tctttggaat gaagtgacca
     1141 cccaggcgag agtactccat gccgctggct gggccctctc agcggtcgag cgaggcgtcc
     1201 tccaccatcc aacgcaccaa ctcgtcgaag ctgatgccgg catgctgtgc catttccggc
     1261 acaagagagg tttcggtcat gccaggttga gtattgacct cgaggcagaa gagacccgtt
     1321 gccccgtcaa ggctgtcatc ataccggaag tccgagcgcg tgacgccgcg gcagccgagc
     1381 gcttggtgcg cggccaatgt cagacgttgg acttccttat aaacagccgg gggaatcggg
     1441 gccggcagca gatgccggga gccgcctggc gcgtactttg cttcgtaatc gtaaaacttg
     1501 acggtcggca cgatttcgat gacgccgagg gcctgctcgc ccatgacggc acacgtgagc
     1561 tccttgccgg gaatatatgg ctcgacaagg atccggtccc cgaaaggcca atcggcacgc
     1621 gtcagttcct gcggtggatg tgtgtgatcc tcacgcacaa taaacacgcc gacgctggag
     1681 ccttcggcca ccggcttgat cacgtaaggg ggcggcagca agtgacgctt cgccacttcc
     1741 ttgcgcggcg cgacccgacc tcctggtaca ggaacgcccg cagtcttaag cactgtcttg
     1801 gcgacttcct tctggatcgc aagcgcggat gccagcacac ccgaatgcgt gtacggaatg
     1861 ccgagaacct cgagcatgcc ctgcaacgtg ccgtcttcgc ccgggcgacc gtgcaggacg
     1921 ttgagtgcgg cgtcgggctt gagcgcgctc aacgtcgcgc cgatgtcacg actgacatca
     1981 acccggctga cccgatagcc cgtgcgctcg agcgcgtcgg cgcaggcttt gcccgagcgc
     2041 aaagacactt cgcgctcagc cgaccagccc cccatcaaga ccgcaacgtg cttcattgcc
     2101 tcagcgtttc actccaaccc gcttgatctc ccattccaga tcgatccctg aattctcctt
     2161 gaccttttcg cggaccgttt cgcccaaagt ctcgatatcg gccgcgctgg cgctgccaag
     2221 gtttatcagg aaattgctgt gaagctcgga gacctgcgcg cccccgatgg tgagcccgcg
     2281 gcagccggcc tcgtcgacaa gcttccatgc gctgtggcct ggagggttct tgaaagtaga
     2341 gccgccggtg cggttgcgcg gctgggttgc ctcgcgcttt ttcttgatcg tggccatctc
     2401 accggcgatt tgctctgcct cacctgcgcg cccctgcagg accgcggctg tgaaaatcac
     2461 atcgtcgggc acactgcagt gccgatacga aaaccccatc tcgccgctgc tgaacgtgcg
     2521 cagattgccc tggcgatcaa tgccgcgcgt ttcaagcaga acgtctttcg tttccccgcc
     2581 gtaagcgccg ccgttcatgc gcaaggcgcc gccgattgtt ccaggaatgc cgctgagaaa
     2641 cgcaagcccg gccacgcccg ccgcctgggc cgcacgcgcc accatgacat cgagcatcgc
     2701 cgtgcctgca gtaacgcgat gctcttcaat ccttacatca ttgaagccgc gaccaagccg
     2761 aatgaccact cccggaacgc ctccgtcacg gacaatcaga tttgatcccg cccctatgac
     2821 agtgacggga atttccgtcg acagattgcg caataaatac gccaggtcgt tctcgtcttc
     2881 cggcatgaag aagacctgcg ccggaccgcc gacgcgaaac caggtaaatt caccaagcgg
     2941 ctgattggcc agcaggcgtc cgcgtaattc gggcatgcgg gctttgagct ctggcacaag
     3001 atcggggaag ctcatagcgc ctttaattcc gtgggaagcg cgtacgccca ttgggtgatc
     3061 gaacccgcgc cgaggcatac gacatagtcg cccggttttg ccatccgctt gatcagcggc
     3121 gcaagactct cggatccttc cagcgccatc gcctgcttgt gaccgcgcgc gcgcaaaccg
     3181 gtgaccaggg catctctatc aaccccgggg atgggttgct cgcctgcggg ataaaccggt
     3241 gcgatgatca ccgcgtctgc atcgttgaag caggtgcaga actgttcgaa aaggtcatgc
     3301 agcctggtgt agcgatgggg ctgcatcacg gcgatcacct gccctttagt actctcacgc
     3361 gcggcgcgga gcacagccgc gatctcgaca ggatgatgcg cgtaatcgtc aatgattgtc
     3421 gctccgttcc attcgccgac ccgcgtaaat cgtcgtttga ctccgccaaa attggcaagc
     3481 gcattgcgga tcgcctcgct ttttattccg agcgcgtgcg caacggcaac ggccgcggtc
     3541 gcattgagcg cgttatggcg gccaggcatc gggagggtaa ggttgtcgat cgtgtgcgag
     3601 accttcccgc cgcgatcgct gaacagaaca gaaaaacgcg actgaccatt gagatgatca
     3661 aggtcggcga gtcgcacgtc ggcctgaggg ttttcgccgt aggtgagaat acgtcgatct
     3721 tccaacttgc cgaccaatgt ttgaacgacc ggatgatccg tgcacatgac cgcgaagcca
     3781 tagaaaggca cattctcgac gaaagcgcgg aatgcgtcct ggacggcatc gaacgtatgg
     3841 aaatgatcga gatgctccgg atcgatgttg gtgataatgg caatgtccgc gggcagcttc
     3901 agaaacgtgc cgtcggattc atcggcctcg acaaccatcc agtcacctgc gccaagtctt
     3961 gcattggtgc cgtatgcatt gatgatgccc ccgtttatca ccgttgggtc gagtcccccg
     4021 gcatcgagca gcgacgcaac cagcgaagtc gtagtcgtct tgccatgagt gcccgcaatt
     4081 gccacgcagc ttttcagccg catcaattcc gctagcatct ccgcgcgccg gacgaccggc
     4141 agacgcttgg cgcgggcagc aacgagttcg gaattgtcac gtttgatcgc ggaagaaacg
     4201 accacgacgt cggcgccatt gatattttcg gacttgtgtc cgatggcgac cttgacgccc
     4261 ttgtcgcgga ggcgcttcac gttcgcgctg tcggcaatgt ccgaacctga cacgatatat
     4321 ccgagattgg cgagcacctc ggcgatgccg ctcatgccaa tgccgccgat gccgacgaaa
     4381 tgcaccggac ctatgtcgcg cggcagtttc attggttcgc ccttggccct tcgattgcgc
     4441 gtctgcgcgc gccgtcatgt cttgcaggag gcgcaaggcc gaaacaaggc cggcagtggt
     4501 taatgactat ttttccgcga ctttcaagac aagctcagcc aacctctcag ccgcgtcggc
     4561 tgtaccggcc gcctgggcgg cccgcgccat acccgaaagc cgggacggat cctgcacgag
     4621 cgccgtgatc tccgtggcca atctttcagg ggtgaaattg cgctgctcga tgcggatggc
     4681 gccgccggta tcctgcagga ttccggcgtt cgcaaactga tcctgatcca aggcgtgggg
     4741 caaaggcacc agaatcgccg gccgccctat ggccgacagt tccgccacag tggacgcccc
     4801 tgaacgcgaa atgaccaagt gggccgccgc catgcgcgca ggcaagtcgg agaaaaacgg
     4861 agcaagctcg gccgccacct cgaggctgga ataggcactg cgaacggcat cgaggtcttc
     4921 cgcacgagtc tgctggacga tcgacagtcg cgcccgcaga tcgggattca aggatccgat
     4981 tgccgaaggg acaatttcgg ccatcacgtg cgcgccctgg ctgccgccaa agacgagtag
     5041 acgcacacgc tcgtttgatg cggcataggg cgagtgcgca gctgcgagca cttgtggacg
     5101 caacgggttg cccgtgaagg tggtcttgct ttgccattgc ggattgagat ttttgagctt
     5161 ggggaatcct gtggcaatcg cggtaacgcg aggagccagg aacctgttgg cacggcccat
     5221 gacaccattc tgctcgtgca agaccgtcgg tatgccgcgc aagcttgcgg ccagaattgg
     5281 cggcaccgtc gggtatccgc caaaaccgac gacaattccg ggcctcatac ggccgagtag
     5341 tgaccaggcc ttggcggtgc cgagcgccag caaggttgcc gtgcgtgcaa gcgatatcgg
     5401 atcgcgcccg cgcacagttg cgctggggat cagatgcacg gctctcgcag gaaattcgaa
     5461 atgcgcggcg cgatggtcgg tggcaagctc gactgtcacc cttcgctttc cgagtgcggt
     5521 tgcaagagcc tcagccggaa acaagtgacc tccggtgccg ccggccgcaa gcaaaacgag
     5581 cggcgtgccg ctcgcagcca tcagacccgg ctcccggcca ccaacgcatt gggcgatatc
     5641 atctcggcgc gtggctgctc gcgcgtcaac gccagcaaca tgcccattgc atatgcgagc
     5701 gaaatcattg acgacccgcc atacgaaata aacggcagtg tcatgccctt cgccggcatg
     5761 agatgcaagt tgaccgccat attgatggtt gattgggtgg caaaaaggat cgtcaggccg
     5821 gccgcagcga aacgggcgaa cggatcgtca ttgcgcatgg cacggatcag catgcggatg
     5881 acaatgaatg cgaatatcgc caccaacgcg agacagagag cgacaccgaa ttcctcagct
     5941 gcgaccgcaa acacaaagtc ggtatggctt tccggaagaa tgcgcttgac cgtgccctca
     6001 cccggccctt tcccgaacca gccgccgcgc acgaagcttt cagtggcaat gtcgatgttg
     6061 aaagtgtcac ccgaacccgg atcgaggaag cgctgaattc ggcgagccac atgcggcaca
     6121 gtgtagtagg cgctcaagag tccgataccg gctagccccg cgatcccggc cacccagacg
     6181 agccgcatgc cggccatgaa gaacagcgcg ctccatacta cggcgatcag catcgtttgg
     6241 ccgaagtcgg gctgcagaac caagagcgcg atcaccacaa gcagtaacac aagcgagaat
     6301 gtgtttgcgg gcatgtccgg tcggcgcgcg gattcgccga acagccaggc aacaatgatg
     6361 acaaaggcgg gctttaggaa ctccgagggt tgtatattga ccccgagcag gaccagccaa
     6421 cgccgcgcac ccttgatctc gggtccgaaa tgcggcgttg ccgccaccaa aatcaggctc
     6481 agtacaaaca cgatcaacga tagtcgacgg atctgacgcg gactcaggaa ggataccgtc
     6541 agcattaccg caatggcggg cagcagatag ataatgtgcc ggttgacgaa aaagaacggc
     6601 tcaagcccca gacgggcggc aacgggtgga ctcgcggcaa gggaaagcac cacgcccgcg
     6661 agcatcagcg cgccgatggc ggcgagcgtg agccggtcga ccgtccacca ccattcgccg
     6721 atgggcgtgc gttgcgcgcg cgagagcatt caattccccg tcgctccaag ctgccgcgtc
     6781 gtggtttagg aagcattaac ggtcgcagtc acaccgggaa gcgcctgtac gatgtcggtg
     6841 aaggctttgc cgcgcacctc gaaatttgga tactggtcga atgacgcaca ggcgggcgag
     6901 agcagcacca ccggctccct cagcccggaa gacgtggcgt cccgagccgc cgcttcgacc
     6961 gccgtcggca ggatgcggct gatttcatac ggcacgcgtc cttccaaggt ctttgcgaat
     7021 tcgccagcgg cctctccgat caggtaagtc ttgcggatgc gcgggaaaaa ctcggcgagg
     7081 ctgtcgatac cgccagtttt cggcttgccg cccgcgatcc agaagatgtc gtgaaaactc
     7141 gccagcgcct tggcggccga atcggcattc gtggccttcg aatcgttgac gaacagcacg
     7201 ttgcccttgt gtccaacctg ctgcatgcgg tgcgcaagcc ccggaaaact cccgagccct
     7261 ttttgaattg acggtgggtc gataccaagc gcaatgcagg ccgcgaccgc gcaggcggca
     7321 ttttgcgcat tgtgcaggcc tcgcagtgaa ccgatcccgg cgagttccgc tacaggatga
     7381 ctcttgccgc gagcggcgcg aaggatatgg ctgccttctg caaaataacc atccgctaga
     7441 gacgatacga cggatacgcg cacgacgttt ttgccggcgc gctcgatgcg gtcggctgcc
     7501 gtgcgcgtgt agacatcgtc gacgtcgatc acggccgtgc cgccttgctc gatgtttgcg
     7561 ggtacccgct ccttgatggc ggcgtagttc tcgatgctgc cgtggcggtc aatatgatct
     7621 tccgagacat tgagcagaac gcctacggtc ggcttgagtg aaggcgccaa atcgatttga
     7681 taagaggaca cttccagcac atatgcgcga cggggctcga acggctcgag cgcaagcacc
     7741 ggcacgccga tattgccgcc catctgggca tctcgtcccg cgcttttgag caagtgcgcg
     7801 gttagcgcgg tcgtcgtcga tttgccattc gtgccggtga tcgcgatcag cgggcaatcc
     7861 cgtccggcct tggcccgctc ccggcaaaac agttcgatgt cgccgatcac ctcgacattc
     7921 gcctcgcggg caagcagcac agtccaatgc ggctcgggat gggtcagtgg gacgccgggc
     7981 gtcagtagca gagcggatat tttggcccat tcgacgttgt gaaggtcttg gactttcaag
     8041 cccgccgcct gcgcttcggc ggttttcttc ccatcgtcat cgaaaacgac cacgtcagcc
     8101 ccaccctctt tcaacgcgcg cgccgcgagc agacctgaac tgccgaggcc gaagaccgcg
     8161 acttttcttc ccgagaaggt cgtgat
//
LOCUS       DATDHO010000840         1914 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_40072, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000840 DATDHO010000000
VERSION     DATDHO010000840.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1914)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1914)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1914
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40072"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(202..477)
                     /locus_tag="VIY07_16405"
     CDS             complement(202..477)
                     /locus_tag="VIY07_16405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383372.1"
                     /translation="MGYDGWLKGHAPLIIAMHKDGHGVDAILDVLASKKDVRLHYRDN
                     PNWKMPLRGTISYILARHGLQYHGATAKSALGKSAATNAQHVENEAA"
     gene            complement(718..1914)
                     /locus_tag="VIY07_16410"
                     /pseudo
     CDS             complement(718..1914)
                     /locus_tag="VIY07_16410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085375.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA];
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="bifunctional diguanylate
                     cyclase/phosphodiesterase"
BASE COUNT          369 a          576 c          572 g          397 t
ORIGIN      
        1 gtagtcgcgt agaagcaccc ggcaatatgc cgagcctcgc tcgccaaatt tcgcgattat
       61 gatgcgacgt ttttggtgtg cctgaccgga ccgcgctcga tcacttcagc ggtttagcac
      121 attgcccgaa attttgttta aatcagaaat ctgtatttga ccctggcacg cgctcgactg
      181 agcaatgccg agcctggtca attacgctgc ttcattttct acgtgttggg cgttggtagc
      241 ggcggacttg cctaaagcgc ttttggcagt tgccccgtga tactgaagcc cgtggcgagc
      301 cagaatatag ctgatcgttc cgcgcagggg catcttccaa ttagggttgt cgcgatagtg
      361 aagtctcacg tctttcttgc ttgccaacac atcaagtatg gcatcgacgc cgtggccatc
      421 cttgtgcatg gcgatgatta gtggcgcatg gcctttgagc catccgtcgt agcccacgtg
      481 gcggggcttt cgaggtctgg cgataggctg attgcagtgt gcgcaaatct ggttcggctt
      541 ccttcccatt tttttagtct ccactgcgtt acgccgcccc aacgaaccga taccgcacgc
      601 tcacagcaca ggaagtgatg gctgtcacat tatgtcgctt tccactctcc agctttggga
      661 atagatggcc gctttgggcc aaaagcgggc attgcgtcat ttaacgtcga tgtccgctta
      721 gcccgccgca gcgagcgcct ttcgtccgag ccggcgcggc gtccgcatgc ggccggtgat
      781 ttcggcgtac tcctcgatcg gtttcggcct cccaacgaaa taaccctgga tctcgctgca
      841 ctgttcgttg gcgagaaatc tgagctgctc ttctgtttcc acgccctcgg ccaggaccgg
      901 gagattcagg ccacggccga gcgcgatgac cgcgcggatg atagtcgagg cctgctggct
      961 gtggctgaga ttggcgacaa aggcctcgtc aatcttgatc ttgtcgaagg ggaacgattg
     1021 cagataagac aatgacgaat agcctgtgcc gaaatcgtcc atggcgatgc gcacgccgag
     1081 cgccttcagg cggcgcagaa tcgagaccgc gcgggtgaaa tcaccgatca gcacgccctc
     1141 ggtgatctca agctcgagcc gggacggtga aaggccgctt tcaagcagaa tctgatgcac
     1201 cagccgcggc agatcgccgt gctggaattg caccggcgac aggttaatcg cgacccgcag
     1261 cggccgcgtc catgaagccg cctcccggca ggcggtacga agaatccatt ctcccaatgc
     1321 aagaatgtgc ccgctctcct cggcgagcgg gatgaacgtg ctgggtgcaa ccagtccgtg
     1381 gcggggatga tgccagcgca tcagcgcttc gaagccggtg acgtcgccat taatgcgcgc
     1441 cctgcggctg aaagtgcagc gcaagctcgt cgcgcgtgat cgctgagcgc agatcctgct
     1501 gcaaggcccg cttctcgcgc agctgcttgt ccatcgatat ttcgaaaaag cggatggacc
     1561 cacgcatctc cgatttcgcg cggaacagcg ccgcatccgt gttcgcgacg agggtcgcag
     1621 cgtcaatacc atcctgcgga tagatgccga cgccgatcgt gagtcccacg tgcaagatgc
     1681 tgccgttgat ttcaatgtcg caatcaagcg ccgcagccag ccgttctgcg agcgcctcgg
     1741 ccgcggccgg ctgggacccg ggcgaggtga tgacggcaaa ttcgtcgccg ccgagccgcg
     1801 caaaaaaggc gccctggcag gccgcctcga ggcggcgcgc cacctcgcgc agcaaggcgt
     1861 cgcccatggc gtggccgaac acgtcattga ccgactggaa gcggtcaaga tcca
//
LOCUS       DATDHO010000841        16448 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_482873, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000841 DATDHO010000000
VERSION     DATDHO010000841.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 16448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16448
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_482873"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1537
                     /locus_tag="VIY07_16415"
     CDS             <1..1537
                     /locus_tag="VIY07_16415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6383373.1"
                     /translation="GRPVKWTAGRSESFVTDAHGRDHVTHAELALDANGKFLAMRVKT
                     IANLGAYMSTFSSSVPTYLYATLLSGQYDIPQIYCEVDAVYTNTVPVDAYRGAGRPEA
                     TFVVERLVEVAAREMAIDPADLRKRNFIKSFPHQTPVIMAYDAGDYNASLRKALDLAD
                     VKGFNKRKREAARRGKLRGLGYSTYIEACGIAPSQAVGSLGCGVGLWESAEVRVNPTG
                     SVEVLTGTHAHGQGHETTFAQLVSDRLGIPFENVSIVHGDTDKVQFGMGTYGSRSGAV
                     GMSAIVKALDKIEAKAKKVAAHMLEAAEGDIVFKDGKFTVAGTDKSAAWGDVALNAYI
                     AHKFAGQELEPGLKETSFYDPTNFTFPAGCHICEVEVDRDTGKTEIVNWTAVDDFGTV
                     VNPMIVEGQVHGGIAQGIGQALLERAVYDQDGQLVTGSLMDYCMPHAHDLPSFKVGLT
                     ETKAPSNPLGIKGCGEAGAIASPAAVINAITDAIGTEELAMPATSQVVWAALMRAQPS
                     QAA"
     gene            1555..2355
                     /locus_tag="VIY07_16420"
     CDS             1555..2355
                     /locus_tag="VIY07_16420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HEY6383374.1"
                     /translation="MYNFTFHRPTTVRQAAGLLARNPEAKLLAGGHSILPVMKLRLAN
                     PSALIDLSLVEGLSGVEQKGRSMVIGAMTRHADAANSPVLQQVLPGLAAVPASIGDPQ
                     VRNRGTLGGSIANNDPNADYPAACLGLGATIITNKRRIAADDFFTGMFSTALEDGEII
                     TKVSFPIAKKAAYEKFKHPASGFALVGVFVSKRGSDIRVAVTGAGANGVFRVKSFEEA
                     LKKRFAAKSLEWMTIPATGMNSDIHASPEYRAHLVGVLARRALAKATA"
     gene            complement(2530..3066)
                     /locus_tag="VIY07_16425"
     CDS             complement(2530..3066)
                     /locus_tag="VIY07_16425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6383375.1"
                     /translation="MTKSDTLEKGAMQMPTIDPGVRIGHVHLKVANLQRALDFYCGVL
                     GFELTTSRPGAAFISAGGYHHHLGLNTWESLGGSPPPPGTTGLYHTAILYPTRRLLAD
                     ALRRLIVAKIPLEGASDHGVSEALYLRDPDDNGVELYWDRPKEKWPKKPDGSLQMFTN
                     PLDLHDLLAELDRSDARV"
     gene            3139..4059
                     /locus_tag="VIY07_16430"
     CDS             3139..4059
                     /locus_tag="VIY07_16430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY6383376.1"
                     /translation="MADKTLPNSIDSTLELLAKADYIADRSLATVLYLALRMGRPLFV
                     EGEAGVGKTEIAKVLASTLGRRLIRLQCYEGLDVSAAVYEWNYGAQMIAIRLAEAEGE
                     GDRTRIEHDVFSERFLIKRPLLQALEPDTAGAPVLLIDEIDRTDEAFEAFLLEVLADF
                     QVTVPELGTVKAPHPPIVVVTSNRTREVHDALKRRCLYHWVGYPSAERELRILRAKVP
                     GIPKKLSEQVVAFVQALRKEDLFKSPGVAETLDWAGALTELDVVALDPATVSDTLGVL
                     LKYQDDITRLDGSKVKALLDEVKSELRAAE"
     gene            4143..5339
                     /locus_tag="VIY07_16435"
     CDS             4143..5339
                     /locus_tag="VIY07_16435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY6383377.1"
                     /translation="MTEGRFAENILYFARALRTAGIPVGPGAVLDALEALSVARIGSR
                     DDFYWTLHAVFVKRHEHTALFDQAFKIFFRKRGYIEKMIASILPETPPGSPAAPPPGA
                     QRIQEALFSGLDQREQQKSDIEIDARLTVSDREVLQKKDFAQMTVAELAAAKEAIARL
                     TLPLDEVRTRRLIPHRHGHLIDIRRTLRASMKAGGAVIDLKYLGPRVKEPPIVALLDI
                     SGSMSEYTRLFLHFLHAVTDARKRVTTFLFGTRLTNVTRAIRQRDPDEALAACAANVA
                     DWSGGTRIATSLHAFNKQWARRVLSQGAVVLLITDGLERDPDDRLAFEMDRLHRSCRR
                     LIWLNPLLRFHAFEARAKGVQAMLPHVDELRPVHNLESMAELVRALSGAPAKGYDPKQ
                     MLKRVA"
     gene            5351..5674
                     /locus_tag="VIY07_16440"
     CDS             5351..5674
                     /locus_tag="VIY07_16440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEY6383378.1"
                     /translation="MLARDEDILRAAEEWRKSGRGVALATVVETWGSAPRPIGSNLVI
                     DSDGNFLGSVSGGCVEGAVVTEAMDVIDSGKPKMLEFGVADETAWKVGLSCGGTIRVY
                     VEKVT"
     gene            5676..6365
                     /locus_tag="VIY07_16445"
     CDS             5676..6365
                     /locus_tag="VIY07_16445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HEY6383379.1"
                     /translation="MKLDVLHTLNSERSARRAVVLVTDVASGEQRLVKAADAPKDALN
                     DVLDKRLRMGKSGMEETPQGRVFLTVYVPSPRLVITGAVHISQTLAPIGQLLGYDVII
                     VDPRTAFASIERFPDVKVIAEWPDVALPPLGIDHYTAFVALTHDPKIDDPALKHALAH
                     DCFYVGALGSKKTHARRVDRLKQAGLTDADIARIHAPIGLEIEAVSPAEIAVAIMGEI
                     TQVLRKKAEAA"
     gene            6362..7984
                     /locus_tag="VIY07_16450"
     CDS             6362..7984
                     /locus_tag="VIY07_16450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding/glycosyltransferase family
                     2 protein"
                     /protein_id="HEY6383380.1"
                     /translation="MKFGAVPVTDAMGATAVHSIRQGEFVLKKGTRIGPNEIAALKAA
                     GIKEIIVARLDAGDVAEDKAAAEIADAIRGEGLRADIAFTGRCNLFAENAGVLVVERG
                     AVDDLNRIDEAITIATLPAYKPVVDGEMVATVKIIPFAVAGAARDRAVAAAEEAKPVI
                     RVAPYKLRKIGIISTLLPGLSPKVVEKTLKITATRIAPAGAEIIAERRVPHEEGAVSR
                     GIDELLKGGAELVIVFGASAIADRRDVIPAAVEAVGGQIEHFGMPVDPGNLMLVGNAG
                     GHPVLGAPGCARSPKENGFDWILMRLLAGLPVTRADITGMGVGGLLMEIVTRPQPREE
                     RVAETRRRVAAIVLAAGRSTRMGAVNKMLAEIGGKPLVRIAAEQAVASHAHPVIVVTG
                     HEREKVEAALKGLPVRLVHNKDFAEGLGTSLKTGISAVPEEADAAIVCLGDMPQVDAA
                     LINRLIAAFDPERGALVIVPSIEGRRGNPVVWSRRFFHDLMAIQGDIGARHLIGNYAE
                     AVVEVPVAGEAALTDVDTPESLSAVKAEIERA"
     gene            8000..8185
                     /locus_tag="VIY07_16455"
     CDS             8000..8185
                     /locus_tag="VIY07_16455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383381.1"
                     /translation="MLPATRTYLEQTLGEGRVMTNVYAPIMRVLVVVALVAATATLMF
                     VAVSTMRLAAVWPSVIT"
     gene            8269..8967
                     /locus_tag="VIY07_16460"
     CDS             8269..8967
                     /locus_tag="VIY07_16460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY6383382.1"
                     /translation="MLRPPARSRKPATRRENRRKRAALAARAVRLSASAARKARSGER
                     RDAILSAALDEFSTRGFEAARLDDVAKRAGVAKGTIYLYFRDKEALFQELIRAMLTPL
                     VGTIEALGQSDLPLAVLADRIADLFVREVYETRRKDVIRLMIAEGRRFPKLAEFYYRE
                     VLSRIIAAVRALLRRAAARGEVPESLAEFPQIIAAPGLVAIIWSGLFERFEPLDVRKM
                     MKTHVELLFAPRRA"
     gene            8964..9746
                     /locus_tag="VIY07_16465"
     CDS             8964..9746
                     /locus_tag="VIY07_16465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HEY6383383.1"
                     /translation="MNMHMNMKLSGLRIAMLAALVLGGCDNGNNRVLQGWVEAELIFV
                     SPDEQGRVMTLKVREGDQVNKGDLIFTVDDDLQRADVVVRNTAVVNAQQSFDRAKELL
                     KSAAGTQKNYDDSEAALRQAKANLEWAKTRLDRRNAFSPGEATVEQIYYRPGETVPAG
                     RPVVALLPPGNLKIRFFAPQAILPEIKYGDVVGVTCDGCEKGLTAKVSFIARSAEFTP
                     PVIYSQEERAKLVFLIEARPEQPEKFRVGQPVTVTLSQEPRK"
     gene            9743..10681
                     /locus_tag="VIY07_16470"
     CDS             9743..10681
                     /locus_tag="VIY07_16470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383384.1"
                     /translation="MNAHDVVIDVHGLTKKFDGRAVVRNLSMQVKRGTIYGFLGPNGS
                     GKTTTIRMLCGLLTPDAGTGTCLGYDIRTETDKIKRHVGYMTQRFSLYQDLSVRENLE
                     FIGRVYGIDQPVAAARGAIERLGLRGREEQLAAELSGGWKQRLALGACTLPSPQLLLL
                     DEPTAGVDPKARREFWNEIHALAADGLTVLVSTHYMDEAERCHEIAYIAFGELLARGT
                     VDEVIASSHLTTYVVSSANGEGLADLTDELTGKPGIDMVAPFGTSLHVSGRDADALEA
                     AIAPYKQRKGLDWKRSEPSLEDVFIDLMSKARDNFQ"
     gene            10678..11841
                     /locus_tag="VIY07_16475"
     CDS             10678..11841
                     /locus_tag="VIY07_16475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383385.1"
                     /translation="MTHLLPPAQEARRLPGEGFWRKTWAMLVKEFIQLKRDRVSFAMI
                     IMIPLVQLLLFGYAINTTPRNLPTAVLMQESSDLSRSILAALENTKYFRVTHLPRSEA
                     EVDQLLASGAVLFAIEFPANFERSVRRGDKPAMLVIADATDPVASGTALSALSEVLQT
                     SLSHDRDVPNRPEMPFEIRTHARYNPAALTQLNIVPGLVGTILTMTMLIFTALSVTRE
                     IERGTMENLLSMPITPVEIMLGKIIPYVFVGVVQASMIISIGVLLFGVPILGSLTMLA
                     LLSTLFIATNLSIGYTFSTIAQNQLQAMQMSMMFFLPNILLSGFMFPFAGMPIWAQYI
                     GEALPLTHFIGIVRSIMLKGSNLSDLRYDAIAMFVLMLVAMTIAVTRFRRTLD"
     gene            complement(11843..12592)
                     /gene="bcsS"
                     /locus_tag="VIY07_16480"
     CDS             complement(11843..12592)
                     /gene="bcsS"
                     /locus_tag="VIY07_16480"
                     /inference="COORDINATES: protein motif:HMM:NF028346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsS"
                     /protein_id="HEY6383386.1"
                     /translation="MRSRRRVYATAIAVATFVFCLGAVTGRARDGDDEDARIMLFSGR
                     DLWRHGGFVHGGFVFAPSGFDQDGLLLKLLFSGGIYRYRASDLGDRHVIGVGVLSQVL
                     PGWRIKRGNAEFKVFFGPEFQKHYLSPDDPSNRLRGTSIGLRIAAELWHEPTLETMIA
                     ADVSLSSIAAANSARAAYGWRILNDLLGGIYVGPETQYFGSQGYRSLRIGMHVTSMKA
                     EDTEWSAATDWAWDSQARASPYVRINVLKRL"
     gene            12760..13977
                     /locus_tag="VIY07_16485"
     CDS             12760..13977
                     /locus_tag="VIY07_16485"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383387.1"
                     /translation="MTAAAISAEDRKRSIAFLNWAHALDHFVLLIYPTVVIGLEVVYR
                     RPYSELIALSSTAFVAFGLFSLPAGWLADRWSRRNMMTAFYIGCGLSLAAAGLAPNLA
                     ALALAMFALGMFASIYHPVGMAMLIEASNARGRTLAFNGVCGNLGVSLAAGISAALAT
                     WFGWRAAFFAPAAVLVATGIFYLWVTPDDRHHAKTRESRPAVPLTPRLAVLLFGLFIV
                     IALSAGLTFNVLTIALPKIVDERLSSALPLVLVGTIATAVLICGALAQLTVGRLVEWV
                     PPHVIFAAVTGLGFLGNLWAAYASGTALLIALAIAVAAIYGQVTVNDMIMARYTADAW
                     RGRVYAVRYFLLFISAGVAIGMISILHESGGFALVLGVNAVIALLLFLATLALVAMII
                     SVEGKQRSPQPAE"
     gene            complement(13978..14469)
                     /locus_tag="VIY07_16490"
     CDS             complement(13978..14469)
                     /locus_tag="VIY07_16490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HEY6383388.1"
                     /translation="MKMKMTTKKRKAKNRPLFTIGYEQAKPAAVLNELTRAKIELLVD
                     TRAVAASRRPGFSKRQLAASLEEAGITYIHLQKLGTPAEGRAAARSGDADALWRIYEK
                     HIRKPEAQQELGELIALIESGKRIALLCYCRDPKTCHRSRIVANVRKRMSLKVADLVP
                     PLF"
     gene            complement(14572..15378)
                     /locus_tag="VIY07_16495"
     CDS             complement(14572..15378)
                     /locus_tag="VIY07_16495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEY6383389.1"
                     /translation="MTNRHGNIYAGIGGWTYEPWRGVFYPKGLPHARELKYAGEHLTS
                     IEINGTFYRTQSPATFRKWASEVPERFVFSVKGPRYAVNRRALKEAGDSIKHFLNSGV
                     TELGTRLGPLLWQFAPFKKFDEADFGGFLELLPKTFDGHALRHVVEVRHDSFKTPAFV
                     ALLRRFEMPVVFAEHETYPAIADVTGDFVYARLQKGDAKLKDGYPPKALDAWAARAKT
                     WSQGGELKDLPRVAKESAMKKPRDVFMYFIHEAKVRAPAAAIALIERLGK"
     gene            complement(15672..>16448)
                     /gene="groEL"
                     /locus_tag="VIY07_16500"
     CDS             complement(15672..>16448)
                     /gene="groEL"
                     /locus_tag="VIY07_16500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEY6383390.1"
                     /translation="KAMLQDIAVLTGGQAISEDLGIKLENVTISMLGRAKKVMIDKEN
                     TTIVNGAGKKADIEARVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEV
                     EVKERKDRVDDAMHATRAAVEEGILPGGGVALLRAVEGLKRLRPENEDQKHGVEIVRK
                     ALQTPARQIAVNAGADGSVVVGKIMEKDQYSFGYDAQTGEYGNLVTKGIIDPTKVVRT
                     ALQDAASIAGLLITTEAMVAEVPKKKEAMPAMPPGGGMDF"
BASE COUNT         3127 a         4838 c         5086 g         3397 t
ORIGIN      
        1 cggccggcca gtcaagtgga ctgcgggcag atcggagtca ttcgtcaccg atgcgcacgg
       61 tcgggatcat gtcacgcatg ccgaactcgc gctcgacgcc aacggcaagt tcctcgcgat
      121 gcgggtgaag accatcgcca atctcggcgc ctacatgtcg acgttctcgt catcggtgcc
      181 gacttacctt tatgcaacgc tgctctccgg ccaatacgac atcccgcaaa tttactgcga
      241 ggtagacgcc gtctacacca acaccgttcc tgtcgatgcc tatcgcggtg ccggccggcc
      301 cgaagcgacc ttcgtcgtcg agcggcttgt cgaggtggca gctcgcgaga tggcgatcga
      361 ccccgccgat ctgcgcaaac gtaatttcat caagtcgttc ccgcatcaaa cgccggtgat
      421 catggcctac gatgcaggcg actataacgc gtcgctcagg aaggccctgg atctcgctga
      481 cgtgaagggc ttcaacaagc gcaaacgcga agcggcgcgc cgcggcaagc tgcgtggcct
      541 gggctattcg acctatatcg aggcttgcgg gattgcgcct tctcaagcgg tcggatcgct
      601 cggctgtggt gtcggcttat gggagagcgc ggaggttcgg gtaaatccga ccggcagcgt
      661 tgaagtgctg acgggcacgc acgcgcacgg gcaggggcac gagacgacct tcgctcagct
      721 tgtttccgat cgtcttggaa taccgttcga aaatgtctcg atagtgcatg gcgacactga
      781 caaggtgcag ttcggcatgg gcacttacgg ctcccgctcg ggcgcagtcg ggatgtcggc
      841 aatcgtcaaa gcgctcgaca agatcgaggc caaggcgaag aaggttgccg cccacatgct
      901 ggaagcagcg gaaggcgaca tcgtgttcaa ggacgggaag tttaccgttg ccgggactga
      961 caagtcggcc gcctggggcg acgtggcgct caatgcctat atcgcgcaca aatttgccgg
     1021 ccaggagctg gagccgggat taaaggagac gagcttctac gatcctacca atttcacctt
     1081 ccccgccggg tgccacatct gcgaggtgga ggtcgatcgc gacaccggca agaccgaaat
     1141 cgtcaactgg acggcggtcg atgacttcgg caccgtcgtc aatccgatga tcgttgaagg
     1201 tcaggtgcat ggcggcattg cgcagggaat tggacaagcc ctgctggaac gtgcggtgta
     1261 cgatcaagac ggtcagctgg tgacgggatc tctgatggat tactgcatgc cgcatgccca
     1321 cgaccttccg tcgttcaaag tcggtttgac cgaaaccaag gcgccttcaa acccgctcgg
     1381 catcaaggga tgtggcgagg cgggagcgat cgcctcaccg gcagcggtta tcaatgccat
     1441 taccgatgcg attggaacgg aagaacttgc aatgccagcc acgtcgcaag tcgtgtgggc
     1501 cgcgctcatg cgggcgcaac caagtcaagc agcgtaattt cgcgggagag atcgatgtac
     1561 aattttactt ttcatcgtcc gacaacggtt cgacaggcgg cgggcctgct cgcgcgcaat
     1621 ccggaggcta agctgctggc gggcgggcat tcgattttgc cggtcatgaa gctcaggctg
     1681 gcgaatccct ctgccctgat cgatctctcg ctggtcgaag gtttgagcgg cgttgagcag
     1741 aagggccgat cgatggtgat cggagccatg acgcggcatg ccgatgcggc caattcgccc
     1801 gtgcttcaac aggtcttgcc gggtctggct gcagtgcctg cttcgatcgg cgatccccag
     1861 gtccgcaatc gcggcacgct tgggggttcg atcgccaaca atgatccgaa tgccgactat
     1921 cccgcggcct gtcttggcct cggagcgacg atcattacca acaagcggcg cattgccgcc
     1981 gacgattttt tcaccgggat gttttcgacc gccctggaag acggtgagat tatcaccaag
     2041 gtgagttttc cgattgccaa gaaggcagcg tacgaaaagt tcaagcatcc ggcttcgggt
     2101 tttgcgctcg tgggggtgtt tgtgtccaag cgcggttcag acatccgcgt agcggtaaca
     2161 ggcgctggcg cgaacggcgt gttcagggtc aagtcgtttg aggaagcgct taagaagcgc
     2221 tttgcagcca agtcgctcga gtggatgacc attccagcaa ccggaatgaa cagcgatatc
     2281 catgccagtc cggaataccg tgcgcatctg gtaggcgtgc tggcacggcg cgcactggcg
     2341 aaggcaacgg cttaacctcg gcgcggtcgg gaactttgcg gctgcgaccg cgtttccggg
     2401 ctacccattc gttgggaggc tttccgtggc cgaactcgca gcacttctta ttcttgtact
     2461 gattgcggcg tcgctcgcct acgtgcgcct gaccgtctag catatcaaat ctgctgaagg
     2521 tcggagcggt cagacccgcg cgtcagacct gtccagttcg gcaagcaggt catgcaggtc
     2581 gagtgggttg gtgaacatct gcaatgatcc gtcgggcttc ttcggccatt tctctttcgg
     2641 ccggtcccag tagagctcaa cgccattgtc gtccggatcg cgcaagtaga gcgcctcgct
     2701 gaccccgtgg tcgctcgcgc cctcgagagg gatcttggcg acgatcagcc ttcgcaatgc
     2761 gtcggccagc agtctccggg tcgggtaaag aatggcggta tggtaaagac cggtcgtacc
     2821 ggggggaggc ggcgagccac cgaggctctc ccaggtatta agtccgaggt ggtggtgata
     2881 accgccggcc gagatgaatg cggcgccggg ccggctggtc gtcagctcaa aacccagcac
     2941 accacagtaa aaatcgagtg cccgctggag gttcgcgact ttcaaatgga catgcccgat
     3001 gcggaccccc ggatcgatcg tgggcatctg catggcacct ttttcgaggg tgtcggactt
     3061 cgtcatgatt tcatcctggc tggcggcacg tggtatcccc acatgtagga caggcacgtg
     3121 gtaggataaa gtccccgcat ggcagacaag acccttccaa actcgatcga ttcaacgctc
     3181 gagctgctgg ccaaggccga ctacatcgcc gatcgttcgt tggcgacggt cctttatctt
     3241 gcgctgcgca tgggccggcc gctgttcgtc gaaggcgagg cgggcgtcgg caaaaccgaa
     3301 atcgcgaaag tgctcgccag cactctcggc cgcaggttga ttaggctgca atgctatgag
     3361 ggcctcgacg tttcggccgc ggtctacgag tggaattacg gcgcccaaat gattgccatc
     3421 cggctcgccg aggcggaagg cgagggtgat cgcacgcgca tcgaacacga cgttttctcg
     3481 gagcgattct tgatcaagcg gccgctgctg caagcgctcg agccggatac ggcaggtgcg
     3541 ccagttcttc tgattgacga aatcgaccgg accgacgagg ccttcgaggc atttcttctg
     3601 gaagtgctcg cagatttcca ggtcaccgtg ccggagcttg ggaccgtgaa ggcgccgcat
     3661 ccgccgatcg tggtcgtcac atccaatcgc acgcgtgaag tgcatgacgc gttgaagcgg
     3721 cgatgcctct atcactgggt cggatatcca agcgccgagc gcgaactaag aattctacgt
     3781 gccaaggtac cggggattcc caagaaatta tccgaacagg tggtcgcctt cgtgcaggcg
     3841 ctgcgcaagg aggatttatt caaatcgccc ggcgtagccg agacccttga ttgggccggc
     3901 gcactcaccg agctcgatgt cgtcgcgctc gatcccgcga ccgtgtctga cacgctcggg
     3961 gtgttgctca aatatcagga tgacattact cgcctcgatg gcagcaaggt gaaggcgctg
     4021 ctcgacgaag tgaagtcgga gctcagggcg gcggagtaac tttgttcaaa gctcgcaaaa
     4081 ggccacgttc atttccgcgc aaacggatcc atcccgccct tgacgggcgg aagaggtcgt
     4141 agatgacaga gggtcgcttc gccgagaaca tcctttactt tgcgcgcgcg ctgcggaccg
     4201 ccggcattcc cgtcgggcca ggtgcggtgc tcgatgcgct ggaagcgctg agcgtagcgc
     4261 gcatcggctc ccgggacgat ttctactgga cgctgcacgc cgttttcgtc aagcggcacg
     4321 agcacactgc tctatttgac caggccttca agattttctt ccgcaagcgc ggatatatcg
     4381 aaaaaatgat cgcttcgatt cttccggaga cgccgcccgg atcgccggca gcgccaccgc
     4441 ccggcgcgca gcgaatccag gaggcactat tctccgggct cgatcagcgc gaacagcaaa
     4501 aatccgatat cgagatcgac gcgcggttga ctgtctcgga ccgtgaagtt cttcagaaaa
     4561 aggacttcgc gcagatgacc gtagccgaac tcgcggctgc gaaggaggcg attgcgcgcc
     4621 tgacgttgcc cctcgacgag gtgcgtacgc gtcggctcat tcctcaccgg cacggccacc
     4681 tcatcgatat tcgccgaacc ttgcgggcga gcatgaaggc gggcggtgcg gtgatcgatc
     4741 tcaaatatct gggtccgcgg gtgaaggagc cgcccatcgt cgcgctcctg gatatttccg
     4801 ggtcgatgag cgaatacaca cgactgtttt tgcattttct gcacgccgtc accgacgcgc
     4861 gaaaacgggt gacgaccttt ctgttcggta cccggctgac gaatgtaacc cgcgcgatcc
     4921 gccaacgcga tccggatgag gcgctagccg cttgcgccgc caatgtggcg gactggtccg
     4981 gtggcacgcg catcgccaca tcgttgcatg ccttcaacaa gcagtgggcg cgacgcgtgc
     5041 tgagccaggg cgctgtcgta ttattgatca ccgacggact tgaacgggac cccgatgaca
     5101 ggctcgcttt cgagatggat cggctgcatc gatcttgcag gcggctgatt tggcttaacc
     5161 ccttgcttcg ttttcatgcc ttcgaagcgc gtgccaaggg cgtgcaagcg atgctcccgc
     5221 atgttgacga attgcggccc gtgcacaatc tggagtccat ggccgagctg gtgcgcgccc
     5281 tgtcaggcgc tccggccaaa ggctacgatc cgaaacagat gctcaagcga gtcgcttgat
     5341 ggaggaggcc atgcttgcac gtgacgaaga tatcctcaga gccgccgagg aatggcggaa
     5401 atcgggacgt ggggtggccc tcgcaaccgt cgtggaaaca tggggctctg cgccgaggcc
     5461 gatcggctcc aatctggtga tcgacagcga cggcaatttt ctgggatcgg tttcaggcgg
     5521 ctgtgtcgaa ggtgccgtcg tcaccgaggc catggacgtg atcgacagcg gcaagccgaa
     5581 gatgctggaa ttcggcgtgg ccgacgaaac ggcatggaaa gtgggtctgt cgtgcggcgg
     5641 gactatccgc gtctatgtcg aaaaggtgac ctgacgtgaa gctcgacgtg ctgcacacgt
     5701 tgaattcgga acgttctgcc cgccgtgccg tagtgctcgt cactgatgtg gccagcggcg
     5761 agcaacgcct ggtcaaagct gccgacgcac caaaggatgc tctgaacgac gtgttggaca
     5821 agcggttgcg catgggcaaa agcgggatgg aggaaacgcc gcaagggcgc gtttttttga
     5881 ccgtctatgt gccttcgccg cgcctggtca tcaccggcgc ggtgcatatc agccagacgc
     5941 tggcgccgat cggccaactg cttggttacg atgtcattat tgtcgatccg cgcacggcgt
     6001 ttgcctcgat tgaacgtttt ccggatgtga aggtcatcgc ggaatggccg gacgtggcgc
     6061 tgccgccgct cggcatcgac cactacacgg cgttcgtcgc gctgacccac gatccgaaga
     6121 ttgacgatcc tgcgctcaag catgcgctcg cgcatgactg cttttatgta ggcgcactcg
     6181 gttcgaaaaa gacgcatgca aggcgcgtgg atcgtctcaa gcaggcggga ctcaccgatg
     6241 ccgatatagc gcgcatccat gccccgatcg ggcttgaaat cgaagcggtg tcgccggcgg
     6301 aaattgcagt ggccattatg ggcgagatca cgcaggtcct gcgcaagaag gcggaagcgg
     6361 catgaagttt ggggcggttc ctgtcaccga tgcgatgggc gcgacggccg tgcattcgat
     6421 tcgccaaggt gaatttgtgc tcaagaaggg aacacgaatc ggcccgaacg aaatcgccgc
     6481 gctcaaggcc gccggcataa aggaaatcat cgtggcgcgt ctcgacgccg gagacgtggc
     6541 ggaagataag gctgccgccg aaatcgcgga cgcgatcagg ggcgaaggcc tgcgcgccga
     6601 tatcgcgttt acgggtcgct gcaatctgtt tgctgaaaat gctggcgtgc tggtcgtcga
     6661 aaggggcgct gtcgacgacc tcaatcgtat cgacgaagcg atcacgatcg cgacattgcc
     6721 ggcctacaag ccggtggtgg atggagaaat ggttgcgacc gtgaagatca ttccgtttgc
     6781 ggtcgccggc gccgcccgcg accgggccgt cgccgcggcc gaagaagcga agccggtcat
     6841 acgggtggca ccctacaagc tgcgcaagat cggaatcata tcgacattgc tgcccggact
     6901 gtcgcccaag gtcgttgaga agacgctcaa gattaccgcg acgcgcatcg cgcctgccgg
     6961 agcagagatc atcgcggaac ggcgcgtgcc gcacgaagag ggcgccgttt cacgcgggat
     7021 cgacgaactt ctcaagggcg gagctgaact cgtgattgtc ttcggcgctt cggccattgc
     7081 cgaccggcgc gatgtaattc ctgcggcggt cgaggccgtc ggcggtcaaa tcgaacattt
     7141 cggcatgccg gtcgatccgg gaaacctgat gctcgttggc aatgcgggcg gtcatccggt
     7201 gcttggtgcg cccggatgtg cgcgcagtcc gaaggaaaac ggcttcgatt ggatcttgat
     7261 gcggctgctc gccggcctgc cggttacccg ggcggatatt acaggcatgg gtgttggcgg
     7321 gctgttgatg gaaatcgtca cgcgtccgca gccgcgcgag gaacgggttg cggaaaccag
     7381 gcggcgtgtt gctgcgattg tgctcgcggc cgggcgttcc acgcgcatgg gcgcggtaaa
     7441 caagatgctg gccgagattg gcggcaaacc gcttgtgcgc attgccgctg aacaagccgt
     7501 tgcctcgcat gctcacccgg tcatcgtcgt gaccggtcac gaacgggaaa aagtggaagc
     7561 agcgttgaag ggtctcccgg tacgcctggt gcacaacaag gatttcgcgg aagggctcgg
     7621 cacgtcgctg aaaacgggca tcagtgccgt accagaagag gccgatgcgg ctatagtctg
     7681 tcttggcgac atgccgcagg tcgacgccgc attgatcaac cggttgatcg cggccttcga
     7741 cccggagcgc ggtgcgctcg tgatcgtgcc aagtatcgaa ggcagacgcg ggaacccggt
     7801 cgtctggtca cggcgcttct tccacgacct gatggctatt cagggcgaca taggagcccg
     7861 ccacctgatc ggcaattacg ccgaggcggt tgtcgaagta ccggtcgccg gcgaggcggc
     7921 gctgaccgat gtcgacacgc ccgagtcgct ttctgccgtc aaggcagaaa tcgagcgcgc
     7981 ctgagattcg aatcattgat tgcttcccgc gactcgcacc tatcttgagc agacgcttgg
     8041 cgagggaagg gtgatgacca acgtctatgc gcccatcatg cgagtgcttg ttgtggtggc
     8101 tctcgtcgcc gcaaccgcca ctttgatgtt cgtcgccgtc agtacgatgc ggcttgccgc
     8161 cgtgtggccc tccgtaatca cctgagatat ctagataatt ttggcttctt gcgccccgcg
     8221 gctattgcca ttaaatggtg actgaccggt cagtcatggg tgcaagcgat gttgcgtcca
     8281 ccagcgaggt cccgcaaacc ggcgacacgg cgggagaatc ggcgcaagcg tgcggctctg
     8341 gccgcccgcg cggtccgact ttctgccagt gcggcgcgca aggcacgtag cggcgaaaga
     8401 cgcgacgcca ttctttcggc agcgctcgat gaattctcca ctcgcggctt cgaggccgcg
     8461 aggctggatg acgttgcgaa gcgcgcgggc gtcgccaagg gtaccatcta tttgtatttc
     8521 cgcgacaagg aggccctgtt ccaggaattg atccgggcca tgctgactcc gcttgtcggc
     8581 acgatcgagg cactgggtca gtccgatttg ccgctcgccg tgctggctga tcgcattgcc
     8641 gacctgttcg tgcgcgaagt ttacgagacg aggcgcaagg acgtcattcg cctcatgatt
     8701 gccgagggca ggcgctttcc gaaacttgct gaattctatt accgggaagt cctgtcacgc
     8761 atcattgcgg ccgtgcgtgc gttgcttcga cgcgccgcgg cgcgtggcga ggtgccagaa
     8821 agccttgccg aatttccgca gattatagct gcccccggct tggtcgcgat catctggagc
     8881 ggcctattcg aacgcttcga gccgctggac gttcggaaaa tgatgaaaac tcatgtcgag
     8941 ctgctcttcg cgccgaggag agcatgaaca tgcacatgaa catgaagctc agtggcctgc
     9001 gaatagcgat gttggccgcg cttgtgctcg gcggctgtga caacggcaat aaccgggtct
     9061 tgcaaggctg ggtcgaagcc gaattgatct ttgtttcccc tgacgagcag ggacgcgtga
     9121 tgacgctgaa ggtgcgcgaa ggggaccaag tcaataaagg cgatctgatc ttcaccgtcg
     9181 acgatgatct gcaaagagca gacgtggtgg tgagaaacac tgcagtcgtc aacgcccagc
     9241 agagcttcga tcgggcaaaa gagctattga agtctgcagc tggaacgcaa aaaaattatg
     9301 acgactcgga agccgcgcta cggcaggcca aggccaacct cgaatgggcg aagacgcgcc
     9361 tcgatcggcg caatgcgttc agtcccggcg aagcgacggt cgagcagatt tactatcgtc
     9421 caggcgaaac cgtgcccgcg ggaaggccgg tggtggcgct gctgccacct ggcaatctca
     9481 agattcgttt ttttgcgccg caggcgatat tgcccgagat caaatacggc gatgtggtgg
     9541 gtgtgacctg cgatggatgc gagaagggcc tgacagcgaa agtgagcttc atcgcgcgga
     9601 gcgcggagtt cactccgccc gttatctata gtcaggagga acgcgccaag ttggtattcc
     9661 tgatcgaggc acgaccagag cagccggaga agtttcgcgt gggccagccc gtcacggtca
     9721 ccttgtcgca agagccgcgc aaatgaatgc gcacgatgtc gtcatcgatg tccatggttt
     9781 gaccaagaag ttcgatggtc gtgccgtcgt gcgcaacctg tccatgcagg tcaagcgcgg
     9841 cacgatctac ggttttctcg gccccaacgg ttccggaaag acaaccacca tccgcatgct
     9901 gtgcggattg ttgacgccgg acgccggcac cggaacgtgt ctcggttacg acatccgcac
     9961 tgaaaccgac aagatcaagc gtcacgttgg ctacatgacg cagcgcttca gcctctatca
    10021 ggatctctcg gtgcgcgaga accttgagtt catcggccgg gtctacggca ttgatcagcc
    10081 ggttgccgct gcacgcggtg cgatcgagcg gcttggtctc agagggcggg aagagcagct
    10141 cgcggctgaa ctctcgggtg ggtggaagca acggttggca ctcggcgcct gcacgctgcc
    10201 aagcccacaa ctgctgcttc tcgacgagcc caccgccggg gtcgatccga aggcaagacg
    10261 ggagttttgg aacgaaattc acgcgctcgc ggccgacgga ctgacggtgc ttgtgtccac
    10321 gcactacatg gatgaagccg agcggtgtca tgagatcgcc tacatcgcgt tcggcgagtt
    10381 gctcgcgcgc gggacagtcg acgaggtgat cgcgtcatct catctcacaa cttacgtggt
    10441 gagttcagca aatggtgagg gtctcgctga tctgaccgac gaactcaccg gcaagccggg
    10501 catagacatg gtcgcgcctt tcggcaccag cctgcatgtg tccggacgcg atgccgacgc
    10561 actggaagct gccattgcac cctacaaaca acgcaaaggg ctggactgga agcgatccga
    10621 accgtctctc gaagacgtat tcatcgacct gatgagcaag gcgcgagaca attttcaatg
    10681 acgcatttgc ttccgcctgc acaagaggcg cgtcgacttc ccggcgaggg cttctggcgc
    10741 aagacctggg ccatgcttgt gaaggagttt atccagctca agcgcgatcg ggtctcattt
    10801 gccatgatca tcatgatccc gctggtacag ctcttgttgt tcggctacgc catcaacacc
    10861 accccgcgca acttgccgac ggcggtgctg atgcaggaaa gcagcgatct gtcacgctct
    10921 atcctggccg cgctggaaaa taccaaatat tttcgcgtca cccatctgcc gcgcagcgaa
    10981 gccgaggtcg accagctgct cgcgtcgggc gctgtgctgt tcgcgatcga attcccggcg
    11041 aatttcgaac gctcggtgcg ccggggcgac aagccggcca tgctggttat cgcggacgct
    11101 accgatcccg tcgcctcggg aacggcgctg agcgccctga gcgaggtcct tcaaacgtcg
    11161 ctatcgcatg atcgtgatgt ccctaaccgc cccgagatgc cgttcgaaat acggactcat
    11221 gcccgctaca atccggcggc gcttactcag ctcaatatcg tgccgggcct ggtaggcacg
    11281 attcttacga tgaccatgct gattttcacc gcgctgtccg taacgcggga gatcgagcgt
    11341 gggaccatgg aaaatctgct gtccatgccg atcacgccgg ttgagatcat gctcggcaag
    11401 atcattccct atgtgtttgt cggtgtggtg caagcgagca tgatcatctc aatcggggtt
    11461 ctgctgttcg gggttccgat cctcggcagc ctgacaatgc ttgcgctgct cagcacattg
    11521 ttcatcgcca ccaacctgtc gatcggctac accttctcga cgattgcgca aaatcagttg
    11581 caagcgatgc aaatgtcgat gatgttcttt ctgccaaaca ttttgctgtc aggattcatg
    11641 tttccattcg ccggcatgcc gatctgggcg caatatatcg gggaggcatt gccgttgacg
    11701 cattttatcg gcatcgtgcg ttcgatcatg ctcaagggct ccaatctgtc cgatcttcgc
    11761 tacgacgcga tcgcgatgtt tgttctgatg ctggtggcga tgaccattgc ggtcaccagg
    11821 ttccgccgca cgctcgacta gttcacagcc gtttcagaac gttgatacgc acgtaggggc
    11881 tggcgcgggc ctgtgagtcc cacgcccagt cggtcgcggc ggaccattcg gtgtcctcgg
    11941 ccttcatgct tgtgacgtgc atgccaatgc gcaaactccg atagccttgt gagccgaaat
    12001 attgcgtttc cggcccgaca tagattcccc ccagcaggtc gttgaggatt ctccagccgt
    12061 aggccgcgcg cgccgaattt gcggctgcaa tcgatgacag cgacacatcg gccgcaatca
    12121 tcgtttccag cgtcggttcg tgccagagtt cggccgcgat gcgcagacca attgaggtgc
    12181 cgcgcagccg gtttgatgga tcgtctgggg agagatagtg cttctgaaat tcgggtccga
    12241 agaaaacctt gaattcggca ttgccgcgtt tgatccgcca ccccggcaat acctgggaca
    12301 gcactccgac gccgatgaca tgccgatctc cgaggtcgct tgctctgtac cgatagatgc
    12361 cgcccgaaaa cagaagttta agaagcagcc cgtcctgatc aaagccgctt ggagcaaata
    12421 caaatccgcc atggacaaag ccgccgtggc gccagaggtc gcgcccggag aacagcatga
    12481 tgcgtgcgtc ctcgtcgtca ccatctcgtg ctcgaccagt caccgcgccc aggcaaaaaa
    12541 caaacgtcgc gacggcgatc gccgtcgcgt atacgcgccg tctggaacgc atccagctac
    12601 tcgaaacgtg gacaacgcta ttaaattgca gtcagacgat tgcacaactt gcgcgctata
    12661 gcgtccccca agcgggggag ggttgcgcca gctgaccggg acaagcgcgc tcaatgggta
    12721 tatgcatcca gtagagtcgc aatactgaac ggaaattaga tgactgctgc cgctatcagt
    12781 gccgaggatc gcaagcgctc aattgccttt ctgaattggg cgcacgcgct cgaccatttt
    12841 gtgttgctga tctacccgac cgtggttatc gggctggagg tcgtctatcg gcggccctac
    12901 agcgagttga tcgccctatc gagcacggcc tttgttgcct ttggcctgtt ctcgctgccg
    12961 gccggctggc tcgcggatcg ctggagccga cgcaacatga tgacggcctt ctatatcggc
    13021 tgcggactgt cgctcgcggc cgccggcctc gcccccaatc tcgcagcatt ggcgctggcg
    13081 atgttcgctt tgggcatgtt cgcctcaatc tatcatccgg tcggcatggc gatgctgatc
    13141 gaggcctcga acgcgcgggg tcgaacgctc gctttcaatg gtgtgtgcgg caacctcggt
    13201 gtatcgctcg ccgccggcat cagtgccgca cttgccacgt ggtttggatg gcgcgcggcg
    13261 ttcttcgcgc cggctgcggt tctggtagcc actggaatct tttacctctg ggtcacgccg
    13321 gacgatcgcc accatgccaa gacccgcgag tccaggccag cagtcccgct tacgccgcgg
    13381 cttgccgtgc tgttgttcgg gctttttatc gtgatcgctc tgagcgccgg gctgacgttc
    13441 aatgtgctga ccattgcctt gccgaagatt gtcgatgagc gcctttcaag cgcgttgccg
    13501 ctggttctcg tcggcaccat cgcgacggcc gtgctcatat gcggagcgct ggctcaattg
    13561 acagtcgggc gcctggtcga atgggttccg ccccacgtga tattcgcggc ggtaacgggg
    13621 ctcggtttcc ttggcaactt gtgggccgcc tatgccagcg gcaccgctct tctgatcgca
    13681 ctcgcgatcg cagtcgccgc gatttacggc caggtcaccg tgaacgacat gatcatggct
    13741 cgctacacgg ccgatgcttg gcgcgggcga gtttacgccg tgcgctactt tctgctgttc
    13801 atcagcgccg gcgtcgccat cggcatgatt tcgatcctgc acgagagcgg cggctttgcg
    13861 cttgtcctgg gcgtcaacgc cgtcatcgcg ctcctgctgt tcctcgccac gctggcgctg
    13921 gttgcgatga tcatcagcgt cgagggcaag cagcggtccc cccagcccgc cgaatgatca
    13981 aaacaggggc ggcacaaggt cggcgacctt tagcgacatt cgttttctga cattcgcaac
    14041 gatgcggctg cggtgacagg ttttcgggtc acgacagtag caaagcaatg cgatgcgctt
    14101 gcccgactcg atcagcgcga tgagctcgcc gagttcttgc tgcgcttcag gtttccggat
    14161 gtgcttttcg taaatgcgcc acagggcgtc agcgtcgccg ctgcgcgctg ccgcgcggcc
    14221 ttcagccgga gtcccgagct tctgcagatg gatataggtt attccggctt cctcaagcga
    14281 ggctgcaagc tgacgcttgg aaaaacctgg ccgacgtgag gcggcaaccg cccgggtatc
    14341 gaccaacaac tcaatctttg cgcgcgtgag ctcgttgagg accgcggcgg gctttgcctg
    14401 ctcgtatcca attgtgaaca gaggacgatt ttttgctttt ctcttttttg ttgtcatttt
    14461 cattttcatt tcaatcttcc aatcacatgt gccgtatctg cttcgtcccc cgccgaagcg
    14521 ggacccggat tgaccgctct ggattcccgc ttgcgcgtga ccgaaggatc ctcatttgcc
    14581 taatcgctcg atcagcgcga tggcggcagc cggcgcacgc accttggcct cgtgtatgaa
    14641 atacataaac acatcgcgcg gcttcttcat tgcgctttcc tttgcaacgc gcggcagatc
    14701 cttcagctct ccgccttgcg accaggtttt ggcgcgagcg gcccaggcat cgagcgcctt
    14761 cggcgggtag ccgtccttga gtttcgcatc gcccttttgc aaccgcgcgt aaacaaagtc
    14821 cccggtgacg tcggcaatgg ccggataggt ttcgtgctcg gcgaagacaa ccggcatttc
    14881 gaatcgccgc agcagcgcaa caaaagccgg tgttttgaaa ctatcgtgcc ggacctccac
    14941 cacgtgacgc agcgcgtgtc catcgaatgt cttcggcagc aattcgagaa agccgccgaa
    15001 atctgcttcg tcgaatttct tgaacggcgc gaattgccag agcaggggcc cgaggcgagt
    15061 gccgagctcc gtcactccgg agttcaggaa atgtttgatc gaatcgccgg cttccttgag
    15121 cgcgcggcgg ttgaccgcat agcggggacc ctttaccgaa aaaacaaatc gttcgggcac
    15181 ctcggaagcc catttgcgaa aggtcgccgg actctgggtg cggtagaagg taccgttgat
    15241 ctcaatcgag gtcaggtgct ccccggcgta cttgagctcg cgcgcatgcg gcagcccttt
    15301 gggatagaag acgccgcgcc agggctcata ggtccagcct cctatcccgg cgtatatatt
    15361 gccgtgccga tttgtcatgc tgacgtcatg tcaggggtat aatgggattt gcaagtggcg
    15421 atgtgtattt gtttgtcgcc acgacggcca ctagcgagga ggcgacgccg gatgaacgcg
    15481 cgccttttcg tgtgtggtcg ttgctttttg ggcttccatt gtcatggccg ggcgtgtccc
    15541 ggccatccgc gtctttgcga agggcaagca agacatggat gcccgcggca agtgcgggta
    15601 tgacggtaga aaatgcaaaa ggcccgggat ctcctcccgg gcctttgcat ttcgcgttta
    15661 gctcgccgag cttagaagtc catgccgccg cccggaggca tggcgggcat cgcctctttc
    15721 ttcttcggca cttcggcgac catggcttcc gtggtgatca gcaggccggc gatcgaagcc
    15781 gcgtcctgca gggccgtgcg tacgaccttg gtcgggtcga tgatgccctt ggtcaccagg
    15841 ttcccgtact ctccggtctg cgcgtcatat ccgaaggagt actggtcctt ctccatgatc
    15901 tttccgacca cgaccgagcc atctgcgccg gcattgaccg cgatctggcg cgctggggtc
    15961 tgcagcgcct tgcggacgat ttcgacaccg tgcttctggt cctcgttttc gggacgcaga
    16021 cgcttgagcc cctcgaccgc acgcaacagt gcgacgccgc cgcccggcag aatgccttcc
    16081 tcgaccgcgg cgcgggtcgc gtgcatcgca tcatcgacgc gatccttgcg ctccttcacc
    16141 tcgacctcgg tggccccgcc gacgcggatc accgcgacgc cgcccgcgag cttggcaagc
    16201 cgctcttgca gcttttcgcg atcgtagtcg gaagtggtct cctcgatctg cgccttgatc
    16261 tggttgacgc gcgcctcgat gtcggctttc ttgcctgcac cgttgacgat cgtcgtgttc
    16321 tccttgtcga tcatcacctt cttggcgcgg ccgagcatgg agatcgtgac gttctcgagc
    16381 ttgatgccga gatcttcgct gatcgcctga ccgccggtca gaacggcgat atcctgcagc
    16441 atggcctt
//
LOCUS       DATDHO010000842         2735 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_339420, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000842 DATDHO010000000
VERSION     DATDHO010000842.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2735)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2735)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2735
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_339420"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1349
                     /gene="lnt"
                     /locus_tag="VIY07_16505"
     CDS             <1..1349
                     /gene="lnt"
                     /locus_tag="VIY07_16505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006497 - protein lipidation [Evidence
                     IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEY6383391.1"
                     /translation="LYWIGYAFLVDVKTFGWLLPVAVAGLPAYLALYTALGLAAARLI
                     WVRGPERILAFAATMTAAEWLRGHLLSGFPWNAFGYAFAEPLVLAQSVSLVGIWTLTF
                     LCLAICATPAVLADDKADTWHPYRPLVLGLVVLAALIAYGATRLWSHPTSYVSGVRLR
                     IMQPNLPQDDKFNYSAKAQVMDRYLRLSDRATGPQSSGLRDVTHLIWPEAAFPFFLSR
                     EPDALAQITALLKPSTVLITGAVRPASDASTTDFRAYNSVYVIDPDGSIRGIYDKVHL
                     VPFGEYLPFQKVLERLGLMQLTKVIGGFLSADRRRAMDVGGGAPKMLPLICYEAIFHG
                     AAVPPGERPGWLVNVTNDGWFGISSGPYQHFQQARLLAIAEGLPLVRAANTGISAVVD
                     PVGRIVNILPLGAEGVLDARLPAALAPTINIAYGNYLLILTLSVSLLMVGRRRIRS"
     gene            1551..1952
                     /locus_tag="VIY07_16510"
     CDS             1551..1952
                     /locus_tag="VIY07_16510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY6383392.1"
                     /translation="MAKKAPNPIDKHVGSRVRMRRMMLNMSQEKLGDALGLTFQQVQK
                     YEKGTNRIGASRLQQIGQILQVPVSFFFEGAPHSPGYSGGMGEAPSPAYVADFLATSD
                     GLSLTKAFMRIKSSKLRRRIVDLVEQIAGID"
     gene            2091..>2735
                     /locus_tag="VIY07_16515"
     CDS             2091..>2735
                     /locus_tag="VIY07_16515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosylmethionine synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6383393.1"
                     /translation="MAHTNFLFTSESVSEGHPDKVCDQISDAILDAFLENDVKLGIAD
                     DSLVNTRLGCETLATTNKIVIAGEGRGQAPLFRKHGDKAVVDRELITKIARDVIRDIG
                     YDQDGFSYYGADVEVLLHGQSPDIAMGVNAKKKKGGEEEGAGDQGIMFGFACTESEVY
                     EKNSFMPAPIYFAHKILKVLSEKRRNGQLYDLQPDSKSQVTIRYVDGKPVGCTKV"
BASE COUNT          558 a          784 c          790 g          603 t
ORIGIN      
        1 gtctctattg gatcggttac gcgtttctgg tcgatgtaaa aacgttcggc tggctgcttc
       61 cggtggccgt agccggcttg cccgcctacc tcgcactcta cactgcgctc ggactggcgg
      121 cggcgcgact gatctgggtg cgtggacccg aacgcatcct ggcattcgcc gctacaatga
      181 cagcagccga atggctgcgc ggtcacctgc tgagcggatt tccatggaac gcgttcggct
      241 atgcatttgc cgaaccgctt gttctggcgc agagcgtgtc actggttggc atatggactc
      301 tcacgtttct ctgccttgcg atttgcgcga ctccggctgt gctggccgac gacaaggcag
      361 acacatggca cccttatcgt ccgctggtgt tgggactggt ggtgcttgcg gctttgattg
      421 catatggggc gaccagactg tggtcgcatc caaccagcta cgtcagcggc gtcaggttgc
      481 gtatcatgca acccaacctg cctcaggacg ataaattcaa ttattccgcc aaggcgcagg
      541 tgatggatcg ctatttgcgc ctgtccgatc gcgcgaccgg tccccaatcg agtggcctgc
      601 gcgacgtaac acatctgatt tggccagaag ccgcgtttcc gttctttctt tcccgtgagc
      661 cggatgcgct tgcgcagatc accgcgctct tgaagccttc caccgttttg atcactggtg
      721 cggtacgtcc tgcgtcggac gcgagcacga ccgatttccg tgcttacaat tcggtctacg
      781 ttatcgaccc cgatggctcg attcgcggca tatacgacaa ggtgcacctg gttccgttcg
      841 gagaatattt gccgttccag aaggtgcttg aacggttggg cctgatgcag ctgaccaaag
      901 tcataggcgg atttctttca gcggatcgcc gtcgcgcgat ggacgtcggt ggtggcgcac
      961 cgaagatgtt gccgctgatc tgttacgagg caattttcca cggcgctgca gtcccgcctg
     1021 gcgagcggcc aggttggctc gtgaacgtta cgaacgacgg ttggttcggc atcagttcgg
     1081 gtccgtacca acatttccag caggctcggc ttctcgcaat cgccgagggg cttccactgg
     1141 tacgcgcggc gaataccggc atttcggcag tggtcgatcc ggttgggcgg atcgtcaaca
     1201 tattgccttt gggtgccgaa ggagttctgg atgctcgcct ccccgccgcg ctcgcaccca
     1261 cgatcaatat cgcctacggc aactatctgc tgatactgac actatcggta agcctgctga
     1321 tggtgggtcg tcgcaggatt cgctcctaga ttgggtcacc taagctttaa acggccaggt
     1381 tgcatcaacg atattggtgc ttcggccgat gtagatccga atcatcatcg tggaaaactg
     1441 gcgaaatcta tcgatcatct aaagtcggtt tcctgattac agcgaattcg cgcattgctt
     1501 tggtgcattc acttgtgaca actacgagga gttgggggca ggagaaatcc atggctaaga
     1561 aggcaccgaa cccgattgac aagcacgtcg gttcgcgggt gcgcatgcgt cggatgatgc
     1621 tgaacatgag ccaggaaaag cttggcgatg cgttaggcct cactttccag caagtacaga
     1681 aatacgaaaa agggaccaat cgcatcggcg caagccgtct gcagcagata ggccagatcc
     1741 ttcaggtgcc ggtttcattt ttcttcgagg gcgcgccgca ttcacccggc tacagtggtg
     1801 gcatgggcga ggcgccgtca ccggcctacg tggccgactt cctcgctacc tcggacggcc
     1861 tttcgctgac caaggcattt atgcgcatca aaagcagcaa actgcgccgc cggatcgtcg
     1921 acctggtcga gcaaatcgcc ggcattgatt gataaggctt gaatcccatc ggtatcgaac
     1981 tttctgccca ccgctgcccg catcttgacc tccttccccg ccgctgcaag aaaccacccg
     2041 gacgataaca gggcgcgcgc atggcgggcg ccacgcgagg agttgcagcg gtggctcaca
     2101 ccaacttttt attcaccagt gaatcagtct cggaaggtca tcctgacaag gtctgcgacc
     2161 agatatccga tgccatcctc gacgcctttc tcgaaaacga cgtcaagctc ggcatcgccg
     2221 acgacagcct ggtgaacacg cggctcggct gcgaaacgct ggccaccacc aacaagatcg
     2281 tcatcgccgg cgaaggccgc ggtcaggctc cgttgttccg taaacatggc gacaaggcag
     2341 tggtcgatcg cgagttgatc accaaaattg cgcgcgatgt catccgggac atcgggtacg
     2401 accaggacgg gttttcatac tatggggccg atgtggaagt tctgctgcat ggtcagtccc
     2461 ccgacatcgc catgggcgtg aatgcaaaga agaaaaaagg cggagaggaa gagggtgctg
     2521 gtgaccaagg cataatgttc ggcttcgcgt gcaccgaaag cgaagtttac gagaagaatt
     2581 ccttcatgcc cgcaccgatc tacttcgcgc acaagatatt gaaggttctt tctgagaaac
     2641 gccgcaacgg ccaactctac gacttgcagc cagattcgaa gagccaggtc acgatccgct
     2701 acgtcgatgg caagccggtt ggctgcacca aggtc
//
LOCUS       DATDHO010000843         1731 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_141284, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000843 DATDHO010000000
VERSION     DATDHO010000843.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_141284"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..842)
                     /locus_tag="VIY07_16520"
     CDS             complement(<1..842)
                     /locus_tag="VIY07_16520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6383394.1"
                     /translation="MMLAFLLARAGIPVVVMEKHADFLRDFRGDTVHPSTLEMMHELG
                     LLGEFLQLPHSVVRQISLQIGEDRLVIGHFEHLPVHCKFIALMPQWDFLNFLADHGKR
                     YPTFDLRMQTEAVDLIEENGRVVGVHARTTQGAVEIHADLVVGCDGRHSTMRAKADLE
                     SDDYGAPMDVMWFRLSRKPDDSAETFGHIEDGRMMVMLNRTDYWQCAYVIPKGTADEV
                     KQAGLDKFRKTVAEMSPFVSDRVSEIESWDLVKLLTVAVDRLRRWYRPGLLCIGDAAH
                     AMSP"
     gene            complement(929..1249)
                     /locus_tag="VIY07_16525"
     CDS             complement(929..1249)
                     /locus_tag="VIY07_16525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HEY6383395.1"
                     /translation="MPKITYTDSSGTARTVEGELGSTVMETAIRNNIPGIEAECGGAC
                     ACATCHVYIDEAWREKVGGPSPMEEDMLDFGYDVRPNSRLSCQIKVTEDLDGLAVTVP
                     EKQA"
     gene            complement(1324..>1731)
                     /locus_tag="VIY07_16530"
     CDS             complement(1324..>1731)
                     /locus_tag="VIY07_16530"
                     /inference="COORDINATES: protein motif:HMM:NF013767.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HEY6383396.1"
                     /translation="KFLATKRGRDARMLQLSVDTQEAVARESAVLDRAHLARMTFNDS
                     GLEREILQLFERQAELLLNRMGRSEPPAIATLAHTLKGSAVRVGAGRVARAAAATEAA
                     ARSTPRECIEAMDQLAQAVDEVRIEIAGLLRTG"
BASE COUNT          340 a          553 c          493 g          345 t
ORIGIN      
        1 atcggcgaca tggcatgcgc cgcgtccccg atgcaaagca ggccggggcg ataccatcga
       61 cgaaggcggt ccaccgcaac ggtcagcagc ttcaccaagt cccagctttc gatttcactg
      121 acgcggtcgc ttacgaaggg cgacatctcg gcgaccgtct tgcgaaactt gtccagtccg
      181 gcctgcttca cctcgtccgc cgtacctttt ggtatcacgt aggcgcattg ccagtagtct
      241 gtacggttca gcatcaccat catgcggccg tcctcgatgt ggccgaaggt ttctgccgaa
      301 tcatcaggct tccgcgacag gcgaaaccac atcacatcca taggcgcacc atagtcatcg
      361 ctctcgaggt ccgccttcgc gcgcatcgtc gagtggcggc cgtcgcaacc cacgaccagg
      421 tcggcatgga tttcgactgc accctgtgtc gtccttgcat gaacgccgac gacacggccg
      481 ttctcctcga tcaaatcgac tgcttccgtc tgcatgcgca gatcgaaggt cggatagcgt
      541 ttgccgtgat cggcaaggaa attgaggaaa tcccattgcg gcatcagcgc gatgaacttg
      601 caatggaccg gcaggtgctc gaaatggccg atgaccaacc gatcctcgcc gatctgcaag
      661 gaaatctgcc tgacaactga atgcggcaac tgcagaaact ccccgagcaa gccgagctcg
      721 tgcatcattt caagcgtcga ggggtgcacg gtgtccccgc gaaagtcgcg caaaaaatca
      781 gcgtgttttt ccatgacgac aactggaata ccagcgcgcg cgagcaggaa cgcgagcatc
      841 atgcccgcgg gccctccacc gacgatgcag caggtggttt tggtcgaggc cacagactga
      901 caagaacctc aggctctacc ggcgcaggct atgcctgctt ttctggaacc gtcacggcca
      961 gaccgtcgag gtcttccgtg accttgatct ggcatgacag ccgcgagttg gggcgcacgt
     1021 cataaccgaa gtcgagcatg tcctcttcca tcggagatgg tccgccgact ttttcccgcc
     1081 aggcctcatc gatatagacg tggcaagtcg cacaagcgca ggcgcctcca cattccgctt
     1141 cgatgcccgg aatattattg cgaattgcag tctccatcac agtcgagcca agctcgcctt
     1201 cgaccgtgcg agctgtgccg ctggagtcgg tgtacgtgat cttgggcatt tggcggggat
     1261 tacttagtca agattggcgc gccggtctct atatagtcat tcgcactgag gcgccatccc
     1321 ctctcaaccg gtgcgcagca gtcccgcaat ctcgatccgc acctcatcga ccgcttgcgc
     1381 gagctgatcc atcgcctcaa tgcactcgcg gggcgtggag cgtgcagccg cttccgttgc
     1441 ggcggcggcc cgcgcgacac gaccggcccc aacacggacg gccgaccctt tcagagtgtg
     1501 cgcaagggtg gcgatagcgg gcggctcgct tcgacccatg cgattcaaca gaagctcagc
     1561 ctggcgctcg aagagctgca ggatttcccg ctcaagcccg gaatcgttga aggtcatgcg
     1621 tgccaggtgc gcgcgatcga gaaccgcgct ttcgcgtgcc acggcctcct gtgtgtcgac
     1681 tgatagctgg agcatcctgg cgtcccgtcc ccttttcgtt gccaggaact t
//
LOCUS       DATDHO010000844         6020 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_40204, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000844 DATDHO010000000
VERSION     DATDHO010000844.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6020)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6020)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6020
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40204"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..660)
                     /locus_tag="VIY07_16535"
     CDS             complement(<1..660)
                     /locus_tag="VIY07_16535"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014890663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEY6383397.1"
                     /translation="MPASQHQSPKSDIEISQTAKKRPILDIAKEKLGIAPENLEPYGH
                     YKAKVSMDYVKSLQGRKNGKLILVSAISPTPAGEGKTTTTVGLTDALNHIGKKAMLCL
                     REPSLGPSFGMKGGAAGGGYAQVVPMEDINLHFTGDFHAITSAHNLLSALIDNHIYWG
                     NALGIDSRRVAWRRVLDMNDRALREIVCSLGGVANGYPREAGFDITVASEVMAIFCLA
                     ND"
     gene            complement(690..1619)
                     /locus_tag="VIY07_16540"
     CDS             complement(690..1619)
                     /locus_tag="VIY07_16540"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020178659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEY6383398.1"
                     /translation="MRIVVHGQQAFGKAVLEALLKRGENVIAVYVAPEKEGAKADPLK
                     EAAIAAKLPVYQPASYKDPKIWEEFKALKPDLQVMAFVTLFVPEDFLNIPTHGSIQYH
                     PSLLPAYRGASAINWPIIKGEKETGLSIFWPDNGLDTGDILVQKKTPISDTDTLGTVY
                     FDRLFPMGVEAMMESVDLVKAGKAPRIKQEESKATYEGRCGPGNARIDWGKPWEQIDR
                     LIRGCNPAPGAWTTLDGKTLKIFDAKPLPARAPKGIAGKLGEVVAVDADGFTVVCADG
                     RFKVTRVQPEGGKKIDASEFISTAKLAAGARLG"
     gene            complement(1645..3066)
                     /gene="frc"
                     /locus_tag="VIY07_16545"
     CDS             complement(1645..3066)
                     /gene="frc"
                     /locus_tag="VIY07_16545"
                     /EC_number="2.8.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033608 - formyl-CoA transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA];
                     GO_process: GO:0033611 - oxalate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyl-CoA transferase"
                     /protein_id="HEY6383399.1"
                     /translation="MAKKKIKKAKVKSRAASKKVVKLRSKKPAKAASNGLPKPSSKPY
                     GQAGKALEGVKILDFTHVQSGPTCTQLLAYMGADCIKVERPGVGDITRGQLRDVKGAD
                     SLYFTMLNGNKRSITIDSKNRKGKEILERLIKHCDVLVENFAPGALDRMGLTWEHIHK
                     LNPRMIVASVKGFGPGPYEDCKVYENVAQCAGGSASTTGFREGPPLVTGAQIGDSGTG
                     LHLAFGICAALYQRTRTGRGQRVLCAMQDGVLNLARVKLRDQQRLKHGPLTEYSQYGE
                     GIPFGQAVPRAGNDSGGGQPGWILKCKGWETDPDAYIYFITQAPVWGQICDLIGKPQW
                     KTDPDYATPPARLPRLRHIFATIEQWTMTKTKFEVMKICNKVDIPVGPILSMKEIAEE
                     PSLRETGTVVEVDHPTRGKYLTVGNPVKMSDSITEVKRSPLLGEHTDEILSKVLGYSA
                     KEIEEIKASGALTAPEKEKAVAA"
     gene            complement(3078..4820)
                     /gene="oxc"
                     /locus_tag="VIY07_16550"
     CDS             complement(3078..4820)
                     /gene="oxc"
                     /locus_tag="VIY07_16550"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008949 - oxalyl-CoA decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA];
                     GO_process: GO:0033611 - oxalate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HEY6383400.1"
                     /translation="MAEAAVKEKREATTPEAEQNLTDGFHLIIDALKLNGLNTIYGVP
                     GIPITDFGRMAQASGIRVISFRHEQNAGYAASIAGFLTKKPGICLTVSAPGFLNGLTA
                     LAHATTNCFPMILVSGSSEREIVDLQQGDYEEMDQLAIAKPLCKAAFRVLHAQDIGIG
                     LARAIRAAVSGRPGGVYLDLPAKLFGQVMNAEAGKKSLVKVVDPAPAQIPAPEAVKRA
                     LDVLKSAKRPLIILGKGAAYAQADDQIRAFVEKSGAPFLPMSMGKGLLPDTHPQCAGA
                     ARSTVLKESDVVMLIGARLNWLLSHGKGKTWGDAPKKFIQIDIEPKEMDSNVEIAAPV
                     VGDIGSCVTALLEGMGSKWPAPPADWTSTVSKKREENIAKMAPRLMNNNSPMDYHGAL
                     GVLRTIVKERPDAILVNEGANTLDLARGIIDMYKPRKRLDVGTWGVMGIGMGYAIGAA
                     IETGKPVLAVEGDSAFGFSGMEIETVCRYRLPVCVVIFNNDGIYRGTDSNTAGTDPAT
                     TVFVKGSRYDRMIEAFGGVGANATTPDELKRAVNAAMDSGKPTLINAVIDPAAGSESG
                     RIGNLNPQSVLKKK"
     gene            complement(4839..5165)
                     /locus_tag="VIY07_16555"
     CDS             complement(4839..5165)
                     /locus_tag="VIY07_16555"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEY6383401.1"
                     /translation="MPTISTDMPHFFLKLIAPRPTFANDMNDAEKAMMQEHFLYWKGR
                     QDKGDVLVFGPVLDPQGPYGMGVISASDEAGARAFAAGDPAMKASVGFKCEIYPMRAV
                     TREATN"
     gene            complement(5146..5871)
                     /locus_tag="VIY07_16560"
     CDS             complement(5146..5871)
                     /locus_tag="VIY07_16560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEY6383402.1"
                     /translation="MSVSSRGGAARKPLPSHPTLEPIDAAPSFKHQAYTALKTAIVAM
                     DIYRSRDDIRLDERKLAHEFGISRTPVREAMAQLESEGFVRSVPRRGIYVVRKTKREV
                     IEMITAWAALESMAARLITQTATDEEIAGLRKMFTTFENGKLRAHLDEYSDVNIEFHQ
                     TIIRLSRNDVLIDLAENLFTHMRMIRRKTIGEKDRADRSIRDHMNIIEALEARATDRA
                     EELVRDHALGLAEHVRRYADYLD"
BASE COUNT         1063 a         1828 c         1809 g         1320 t
ORIGIN      
        1 gtcgttggca aggcagaaga tcgccatcac ctcggacgcg accgtgatat cgaacccggc
       61 ctcacgcgga tagccgttgg cgacgccgcc gagcgaacag acgatctcgc gcagcgcgcg
      121 gtcgttcatg tccaggaccc ggcgccaggc cacacggcgc gagtcgatgc cgagcgcatt
      181 gccccagtaa atatggttgt cgatcagggc ggaaaggaga ttgtgcgccg aggtgatcgc
      241 gtggaagtcg ccggtgaagt gcaggttgat gtcttccatc ggcaccacct gcgcgtaacc
      301 gccgccggcg gcgccgccct tcatgccaaa tgacgggccc aggcttggct cgcgcaggca
      361 cagcattgct ttcttgccga tgtggttgag cgcgtccgtc agtccgacgg tggtcgtggt
      421 cttgccctca cctgccggtg tcggcgagat cgcggagacc agaatgagct tgccgttctt
      481 cctgccctgc agcgacttca cgtagtccat cgacaccttg gccttgtagt ggccgtaggg
      541 ctcgagattt tccggagcga taccgagttt ttcctttgcg atgtcgagga tcggtcgttt
      601 cttcgcggtc tgcgaaattt cgatgtcaga cttcggactt tgatgctgcg aggcgggcat
      661 gacgaggggt tccgttacga aattgacgat cagccgagcc gcgccccggc ggcgagcttg
      721 gcggtggaga tgaattcgga ggcgtcgatt ttcttgcctc cttcgggctg aacccgggtg
      781 actttgaagc gcccgtcggc gcaaaccacg gtaaatccgt cggcatcgac cgcgacgact
      841 tccccgagct tgccggcgat tcccttcgga gccctggcgg gcaatggttt cgcgtcgaaa
      901 attttcaagg tcttgccgtc gagggtggtc cacgcccctg gcgcaggatt gcagccgcgg
      961 atcaggcgat cgatttgctc ccaaggcttg ccccagtcga tcctggcgtt gcccggaccg
     1021 cagcggcctt cataggttgc cttcgactcc tcctgcttga tgcgcggcgc tttgccggcc
     1081 ttcacgaggt cgacggactc catcatcgcc tcgacgccca tcggaaagag acgatcgaaa
     1141 tagaccgtgc cgagcgtgtc ggtgtcggaa atcggcgtct tcttctggac aaggatgtcc
     1201 ccggtatcga gcccattgtc tggccagaaa atcgacaacc cggtttcttt ctcgcccttg
     1261 atgatcggcc agttgatcgc gctggcgcca cggtacgccg gcagcagcga cgggtgatac
     1321 tggatcgaac cgtgagtcgg aatgttgaga aagtcctcgg gcacaaacag cgtgacgaag
     1381 gccatgacct gaagatcagg tttcagcgcc ttgaattctt cccatatttt cgggtccttg
     1441 taggacgcgg gctgatagac cgggagcttg gccgcgatgg cagcttcctt gagcggatca
     1501 gccttggcgc cctccttttc cggcgcgaca tagacggcga tcacgttttc gccgcgcttg
     1561 agcagcgcct ccagcacagc cttgccgaag gcctgctggc catgaaccac gatacgcatt
     1621 tagccctccc gaaccggtcg aaacctacgc cgccacagcc ttttcttttt ccggtgcggt
     1681 aagagcgccg gacgccttga tctcctctat ttccttggcg ctgtagccaa gcactttgga
     1741 aaggatctca tcggtatgtt cgcccaagag cggcgaacgc ttcacctcgg tgatcgagtc
     1801 cgacattttc accggattgc ccaccgtgag gtacttgccg cgggtcgggt gatcgacttc
     1861 aacgactgtg ccggtttctc gcagcgacgg ttcctcggcg atctccttca tcgacaggat
     1921 cggtccgacg ggaatgtcga ccttgttgca gattttcatc acctcgaact tcgtcttggt
     1981 catagtccac tgctcgatcg tcgcgaaaat gtgcctgagc cggggcagcc gggccggcgg
     2041 cgtcgcataa tcgggatccg tcttccattg cggcttgccg atcaggtcgc agatctggcc
     2101 ccagaccggc gcctgcgtaa tgaaataaat gtaagcatcg ggatccgtct cccagccctt
     2161 gcatttgagg atccatcccg gctgtccgcc acccgagtcg ttgcccgcgc gtggaacggc
     2221 ttgtccgaac ggaatgcctt cgccgtactg gctgtattcg gttagtggtc cgtgcttgag
     2281 acgctgttga tcgcgcaatt tcacgcgcgc gagattgagc acgccatcct gcatggcaca
     2341 aaggaccctc tgcccgcgcc ctgtgcgcgt gcgctggtag agcgcggcac aaatgccgaa
     2401 tgccagatga aggcccgtac cggagtcgcc gatttgcgcg ccggttacga gcggcggtcc
     2461 ttcgcggaat ccggtcgttg aggcagaacc gcccgcgcat tgggcgacgt tctcgtaaac
     2521 cttgcaatcc tcgtaggggc cgggcccgaa gcccttcacc gaggcaacga tcatgcgcgg
     2581 gttgagcttg tggatgtgct cccaggtgag gcccatgcga tcgagcgctc caggcgcaaa
     2641 attttcgacc agcacgtcgc aatgcttgat cagccgttca agaatctcct tgcccttgcg
     2701 attcttggaa tcgatcgtga tcgaacgctt gttgccattg agcatggtaa agtagaggct
     2761 gtcggcaccc ttcacgtcgc gtaattggcc gcgcgtgata tcgccgacgc cgggccgctc
     2821 gaccttgatg cagtcggcgc ccatataggc gagcagctgc gtgcatgtcg gcccgctctg
     2881 cacgtgcgtg aaatcgagga tcttcacgcc ctcgagtgcc ttgccagcct gcccgtaagg
     2941 cttggacgaa ggcttcggca gaccattcga ggcggccttg gccggctttt tcgacctaag
     3001 cttcacaacc tttttggaag ccgctctgga tttgaccttt gcctttttga ttttcttctt
     3061 tgccatgttc gttcccctta tttctttttc agcacgcttt gtggattgag attcccgatg
     3121 cggccgctct cgctcccggc cgccggatcg atgactgcgt tgatgagcgt cggcttgccg
     3181 gagtccatcg cagcattgac ggcgcgcttc agctcgtcgg gcgtcgtggc attggcgccg
     3241 acaccgccaa acgcctcgat catcctgtcg tagcgcgaac ctttgacaaa gacagtggtg
     3301 gcagggtccg taccggccgt attgctgtca gtcccgcgat agatgccatc attgttgaag
     3361 atgacgacgc agaccggcag cctgtagcga cagaccgtct cgatctccat gccggagaag
     3421 ccaaacgcgc tgtcgccctc gaccgcgagc accggcttgc cggtttcgat cgctgcgccg
     3481 atcgcatagc ccatgccgat gcccatgacg ccccacgtcc cgacgtcgag gcgcttgcgc
     3541 ggcttgtaca tgtcgatgat gccgcgcgcg agatcgagcg tgttggcgcc ttcgttgacc
     3601 aggatggcat ccggccgctc cttgacgatg gtgcggagca cgccgagagc accgtgatag
     3661 tccatcggcg aattgttgtt catcaagcgc ggcgccattt tcgcgatgtt ctcttcgcgc
     3721 ttcttggaga cggtactcgt ccagtcggcc ggcggcgccg gccatttcga gcccatccct
     3781 tcgagcaatg ccgtcacgca tgagccgata tcgccgacca caggcgcggc gatctcgaca
     3841 ttcgaatcca tctcctttgg ctcgatatcg atctggatga atttcttcgg cgcatcgccc
     3901 caggtttttc ccttgccgtg cgaaaggagc cagttaagcc gggcgccgat cagcatcacg
     3961 acgtcggatt ctttcaggac cgtcgagcgc gccgcgccgg cgcattgtgg atgcgtatcg
     4021 ggcaggaggc ctttgcccat gctcattggc agaaacggcg cgccgctctt ctcgacgaac
     4081 gcgcgtatct gatcgtcggc ttgcgcgtag gccgcaccct tgccgaggat gatcagtggc
     4141 cgctttgcgc ttttcaggac atcgagcgcg cgtttgaccg cttccggagc tggaatttgg
     4201 gccggcgcgg gatcgaccac ctttacgaga gacttctttc cggcctcggc attcatcacc
     4261 tgaccgaaca gcttggccgg caaatccaga tagacgccgc ccggacgtcc ggaaacagct
     4321 gcgcggatcg cgcgcgcaag cccgatgccg atgtcctgcg catggagcac gcggaaggcc
     4381 gccttgcaaa ggggcttggc gatcgcgagc tggtccatct cttcgtagtc gccctgctgc
     4441 aggtcgacga tctcacgctc ggaggagccc gacacaagga tcatggggaa gcaattggtg
     4501 gtggcgtggg cgagcgcagt caaaccgtta agaaacccgg gagccgaaac ggtaagacaa
     4561 atgcccggct tcttggtgag gaagccggcg atcgacgctg catagcccgc gttctgttca
     4621 tggcgaaagg aaatgacgcg aattccggaa gcttgtgcca tgcggccgaa gtcggtgatc
     4681 ggaatgccag gcacaccgta aatcgtgttc aggccgttga gcttgagggc atcgatgatg
     4741 aggtgaaagc cgtcggtgag attttgctct gcttccggcg tcgtggcttc gcgtttttcc
     4801 ttcactgcag cttctgccat gggagtcctc ccgatcactc agtttgttgc ttcgcgcgtc
     4861 accgcgcgca ttggatagat ttcacacttg aaaccgacac tggctttcat cgccggatcg
     4921 ccggccgcaa aggcgcgcgc accggcttcg tcggatgcgc ttataacgcc cattccatag
     4981 ggtccttgcg gatcaaggac tgggccgaac accagaacat ctcccttgtc ctgccgtcct
     5041 ttccagtaaa ggaaatgctc ctgcatcatc gccttttctg cgtcattcat gtcattcgcg
     5101 aacgtcggcc gcggcgctat cagcttgaga aagaaatgcg gcatgtcagt cgagatagtc
     5161 ggcatagcgc ctcacatgct cggccagacc gagcgcgtga tcgcgcacga gttcttccgc
     5221 gcggtctgtt gcacgcgctt ccagggcttc aatgatattc atgtggtcgc ggattgatcg
     5281 atcggcccgg tctttctcgc cgatcgtctt gcgccgtatc atgcgcatgt gcgtgaagag
     5341 gttttcggcg agatcgatca gcacatcgtt gcggctgagc cggatgattg tctgatggaa
     5401 ttcgatgttc acgtcggagt attcgtcaag atgcgctcgc agcttgccgt tctcaaacgt
     5461 cgtaaacatc ttgcgcaagc cggcaatttc ctcatcggtc gcagtctggg taatcagccg
     5521 cgccgccatg ctctcgagcg ctgcccaggc ggtgatcatc tcgatcacct cgcgtttggt
     5581 ctttcgcacg acataaatgc cgcggcgcgg caccgagcga acaaagcctt cgctctcaag
     5641 ctgcgccatc gcttcccgga ctggcgtgcg actgatgccg aactcatggg cgagcttgcg
     5701 ctcgtccagg cggatatcat cccggctgcg atagatatcc atcgcgacga tcgcggtttt
     5761 tagcgcggta taggcctggt gcttgaagct tggcgcggcg tcgatcggct cgagcgtggg
     5821 gtgggacgga agaggctttc tggcggcgcc tccacggctg gacacactca cgcgactgga
     5881 actgcgggct cggttactca tggctggtat acaatatgcc agaaccgtgc ggacaggcaa
     5941 ccgccccccg gtcgaagaac aaaagtcgcc cgcagggtta tcccacgggc ggctttgcgc
     6001 atttcgggct aggtcagcta
//
LOCUS       DATDHO010000845         3138 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_40234, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000845 DATDHO010000000
VERSION     DATDHO010000845.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3138)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3138)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3138
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40234"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1629
                     /locus_tag="VIY07_16565"
     CDS             <1..1629
                     /locus_tag="VIY07_16565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6383403.1"
                     /translation="TGLVGVAERLLAPLRRREIKAAAMAGRRTAEDLTLPQNLLRAHD
                     HNSLVLSARNLEKSFGGIHAVRGFDLSVRDRTLHALIGPNGAGKTTAFNVLSGLYAPD
                     AGSVELEGKSIAGLKPEDITRAGVGRSFQITNLFGGLSVEENVRLAVQAHSRMRHAMW
                     RSTASLSDIHGETAELVGYLGLAGIESAEASSLSYGGQRVLDMGLALATRPRILLLDE
                     PLAGLAVAERERIAKLIKTLSTEIPILLVEHDIDRVFRIADHVTVMNDGAVLVDGSVE
                     DARNNDRVREVYIGSGSAAVAAEQRKSVVEPERLLTVDSINTFYGKSHILNSVSFDVR
                     KHEIVALLGRNGAGKSTLLKSLVGIARPEAGSIRLLEQETVGLPSAEIARRGIGYVPQ
                     GRGLFAGMTVADNLVLGRLKRTGGDGIRWNDERIIEVFPRLAERWNTPADYLSGGEQQ
                     MVAVARALAGTVRVLLLDEPFEGLSPAVTQELFEVFDRLRREIAIVIVDHHLDLALAL
                     SDRTVVLERGSVTWTGASALLKDDLGLRRKVLWL"
     gene            complement(1687..2559)
                     /locus_tag="VIY07_16570"
     CDS             complement(1687..2559)
                     /locus_tag="VIY07_16570"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6383404.1"
                     /translation="MRIIVPLAPGGAIDFIARATSERMSLTIGQQVVVENRTGAGGTI
                     GMDAAMKSPPDGYTVLITNDNAASAPHIMKLSYDYTKEMIPVCFLGRHGQILAAHSSV
                     GVSNFKELIGYTKKNPGVGVATSGVGSNQHVLCEWLKRETGVKFDHVPYRGAGQAIND
                     FIAAHVKTAILGPTSMMQHAQAGTIKMLASSAANRSKTLPDVPTIEESGYKGIVLEAW
                     YGAFVPAGTPPALVARLNEEMNKALKDPKLIDTFAKGAIEPVGGKPEDLGKLARSDSE
                     KYARLVKELNLVTN"
     gene            2794..>3138
                     /locus_tag="VIY07_16575"
     CDS             2794..>3138
                     /locus_tag="VIY07_16575"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY6383405.1"
                     /translation="MATLTRKSSAKAHKPFANYSHVVTAQGANKLVFCAGQVAADPTG
                     KVLPPDDFGAQTKMVMANLVLALEEGGASLKDVVKVTIYICNPHDVPKARAILQEYFG
                     NNPPASTLCVLRG"
BASE COUNT          610 a          906 c          953 g          669 t
ORIGIN      
        1 accggcctcg tcggggtcgc cgaacggctg ttggcgcctc tacgcagacg ggagatcaag
       61 gccgctgcaa tggcaggccg tcggactgcg gaggatctta cgttgcccca aaacttgctg
      121 cgggcgcatg atcacaacag cctggtcctt tcggcaagaa atctggaaaa gagcttcggc
      181 ggaatccatg ccgtgcgcgg ctttgacctc tcggtgcgcg acaggacatt gcacgcgctc
      241 atcggtccaa acggggcggg caagacgacg gcattcaatg tgttgtccgg cctctacgcg
      301 ccggatgctg gttcggtcga gctcgaagga aaatccatcg cagggctcaa acccgaagac
      361 atcacgaggg caggggtcgg ccgctcgttc cagatcacta atttgtttgg cggattgagc
      421 gtcgaggaaa acgttcgcct tgccgttcag gcgcactcgc gcatgcgcca tgcgatgtgg
      481 cgctcgacgg cttcgctctc cgatattcac ggcgaaactg cggaactcgt tggctacctt
      541 ggccttgccg gcatcgaaag cgcggaggcg tcgtctctct cctatggcgg ccagcgcgtg
      601 ctcgatatgg gtcttgcatt ggcaacacga ccgcggattc tgctgctgga tgagccgctg
      661 gccggacttg cagtcgccga gcgcgagcgc attgcaaagc tgatcaagac actttccacg
      721 gaaattccga tcttgctggt cgagcacgac atcgaccgtg ttttccggat cgccgatcat
      781 gtcacagtca tgaatgacgg cgctgttctc gtcgacggca gcgtcgaaga tgcgcgcaac
      841 aacgacaggg tgcgtgaagt atatatcggt tcgggtagcg ctgccgtcgc tgccgaacag
      901 cgcaaatctg tggtggagcc tgaacggctc ctcaccgtcg acagtatcaa cactttctat
      961 ggcaaaagcc acatcctcaa cagcgtttcc tttgacgtac gcaagcacga gatcgtcgcc
     1021 ttgctgggtc gcaatggagc cgggaaatcg actctgttga agagcctggt cggaattgca
     1081 agaccggaag caggctcgat cagacttctg gagcaggaaa ctgttggcct gccttcggcc
     1141 gagatcgcac gtcggggaat cggctacgtg ccacaggggc gcggactatt cgcgggcatg
     1201 acggttgccg acaatctggt gctgggccgg ctcaaacgta cggggggaga cgggattcgt
     1261 tggaatgacg agcgcattat cgaggtcttt ccgcgattgg ccgaacgttg gaatacaccg
     1321 gccgactact tatccggggg cgagcagcag atggtcgccg tcgcgcgcgc gctggcgggc
     1381 accgtgcgcg tgcttctgct cgatgaacca ttcgaagggc tttcccccgc tgtcactcag
     1441 gaactgttcg aagtcttcga ccggcttcgg cgcgagatcg cgattgtgat cgtcgaccat
     1501 cacctcgatc ttgcattggc gttgtcggac cggaccgtgg tgctggagcg tggctcggtc
     1561 acgtggacgg gggcctccgc cctgctcaaa gacgatctcg gattgcgaag aaaagtgctg
     1621 tggctgtgaa ccggcgttcc gaaacgccag tcgcgctcgg atgaccacaa tcgccgtttc
     1681 gtttgatcag ttcgtcacca ggttgagctc tttcacaagc cgcgcgtatt tctcggaatc
     1741 tgaccttgcc aacttgccaa ggtcctcggg tttgccgccg acgggctcga tcgcgccttt
     1801 ggcgaacgtg tcgatcaact tcggatcctt gagcgccttg ttcatttcct cattcaagcg
     1861 cgcaaccagc gccggaggcg tgccggccgg aacgaaggca ccgtaccacg cctcgagcac
     1921 gatacccttg tagccggact cttcaatggt cggcacatcg ggcaatgttt tgcttctgtt
     1981 ggccgccgac gatgcgagca tcttgatggt gcccgcttgc gcgtgttgca tcatcgaggt
     2041 cgggccaagg atcgcagtct tgacgtgtgc agcgatgaaa tcgttgatcg cctgacctgc
     2101 gccgcgataa ggcacgtgat cgaatttgac gcctgtttct ctcttgagcc attcgcacag
     2161 gacatgctga ttcgacccga caccggaggt cgcaacgccg acgcccggat tctttttcgt
     2221 atatccgatc agttccttaa agttgctaac gccgactgag ctatgcgcgg ccaggatttg
     2281 accatgccgc ccaagaaaac ataccgggat catttcttta gtgtagtcgt agctgagctt
     2341 catgatgtgc ggcgcgctcg cggcattgtc attggtaatc aggaccgtgt agccgtccgg
     2401 agggcttttc attgcggcat ccataccgat ggtgcctccg gcgccggtcc ggttttccac
     2461 cacaacctgc tggccgattg tcagcgacat gcgctcgctc gttgcgcgcg cgataaaatc
     2521 gattgcgcct cctggcgcaa gcggcacgat gattcgcacg ggcctgttcg gccaatccga
     2581 tgcttgcgcc caagctcggg agcggttgcc gaggcccgcg gcaacagcgc ctgtagcggc
     2641 aaaaagaagt gcgcggcgat tcagttttga catagtgttt cccccttgag gaaaccgtat
     2701 cacgctattt tgacagcggc ctagggccta tttgtcacgg ctgtgcggct tctcgttcgg
     2761 acgaaggaca acgagcagta aatggggagc gcaatggcaa cgttgacgcg caagtcatcg
     2821 gcaaaagcgc acaagccttt cgccaactat tctcacgtcg taaccgccca gggagcgaac
     2881 aagctcgtct tctgtgccgg ccaggtcgcc gccgatccca ccggcaaggt attgccgccg
     2941 gatgatttcg gtgcgcaaac aaaaatggtg atggcgaacc tggttctggc tctggaggaa
     3001 ggcggtgcca gcctgaagga tgtggtgaag gtgacaatct acatttgtaa tccgcacgac
     3061 gtgccgaaag cccgcgcgat tctccaagag tattttggca acaatccgcc ggccagcacg
     3121 ctttgtgtgc tgcgcgga
//
LOCUS       DATDHO010000846         6956 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_483084, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000846 DATDHO010000000
VERSION     DATDHO010000846.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6956
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483084"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..390
                     /locus_tag="VIY07_16580"
     CDS             <1..390
                     /locus_tag="VIY07_16580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEY6383406.1"
                     /translation="LTRDCFWHDLNKVIVEACDRSLPLSVARFSFNSADERASFDAAR
                     LMTRLIRNIDFATREEDGAILVAFTQTDLRSKHVIARRLAGILKSAMLTQRHASEANV
                     TLATLKAGDTLNPLMMRLAAGRMVAAG"
     gene            426..1085
                     /locus_tag="VIY07_16585"
     CDS             426..1085
                     /locus_tag="VIY07_16585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HEY6383407.1"
                     /translation="MAGQQPVRIDFVSDVVCPWCFIGKRRLEKAIALHPEIPVEVHWR
                     PYFLNDWIPREGISREQYLTTKFGSPERYKGIAQRVAAAASAEGLNYAMDKISRQPNT
                     LDAHRLIRWAERAGKAAQMKQKLMDLYFTQGADLTNHAVLVQAAADICLDADNIRQAL
                     ASDQDTAEIEREALSAKEAGIEGVPCFIFGGKFAVSGAQTPEYLAEAIARVAQAADAA
                     E"
     gene            1104..2207
                     /locus_tag="VIY07_16590"
     CDS             1104..2207
                     /locus_tag="VIY07_16590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HEY6383408.1"
                     /translation="MKITAAVVHERSGPFHIEQLDLCDPRNDELLVEVVASGMCATDL
                     HGRDAYYPTKFPKVFGHEGAGIVRAVGNAVTSFKPGDHVVMAYPWCGECPNCKAHRQS
                     YCLHAFDLKMNGTRADGSTLHSKNGAPVYSAFFQQSSFGSFAIANERFAVKVRGDAPI
                     EQVCALACGGQTGAGAVLNVMKPRSGESFVVFGVGAVGLSGLMAARIAGCDPVIAIDV
                     HEHRLALARELGATHVINHKECNDVVPQIRTITGSGAQFSLETSALPEIFREAVDCLM
                     PGGVCVLLGSARKGTEVSFEMPVLQNGRTVRGVIQGDSVPKEFIPILVDHIMAGRFPV
                     EKMITFYALSDINRAAAESAAGKTIKPVLRMPH"
     gene            complement(2318..5845)
                     /gene="mfd"
                     /locus_tag="VIY07_16595"
     CDS             complement(2318..5845)
                     /gene="mfd"
                     /locus_tag="VIY07_16595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEY6383409.1"
                     /translation="MSQSGQSPAELLKRGKPLTLAQVADGAEGLVLTDLARAVAASKD
                     APPISLAVVCRDGQRMGALSRALAFFGPDIQVMEFPAWDCLPYDRVSPNAAVVAQRMT
                     VLSRLTRVKGRDKPSILLTTVNASLQRVPTRDFVATHALSVAPGNVIGMQGIIDWLEL
                     NGFVRASTVREPGDYAVRGGILDLYPPGMDMPVRLDFFGDAIETIRAFDAETQRSEEQ
                     LRGLDLVPVAEFQLITDTIRRFRTGYVAQFGASAPDDQLYESVSEGRRYPGMEHWLPL
                     FHDRLQTIFDYLPGTALALEHLVEDAAHERFAQITDYYDARRDALKEGAGPIYKPLPP
                     DRLYLGESEWKAKLEGSALARLTPFAVPDAGAINIGARTGRNFAAERAEPGANVFEAV
                     GAHVLALQATGKRVSVALWSDGARDRMSHVLADHNLHNLTSVGSWPQALTLPRSTVAL
                     AVLGIESGFETEDAAIISEQDILGDRLVRPRRAARRAENFIAEATSLAPGDLVVHVDH
                     GIGRFQGLQPIEAAGAPHDCLEIHYAEGAKLYLPVENVDLLSRYGSEETAVDLDRLGG
                     GNWQARKARMKSRIREIAGELIKIAAERQLREAPRLTVGPGAYDEFCAGFPYEETDDQ
                     LAAIDATIKDLASGRPMDRLICGDVGFGKTEVALRAAFITAISGKQVAIVVPTTLLAR
                     QHFKTFSDRFRGFPVNIAQASRLVPTPELNKAKSGLADGSVDIIIGTHALLGKNIKFK
                     DLALLVVDEEQHFGVAHKEKLKALRSEVHVLTLTATPIPRTLQLALTGVRDLSIIASP
                     PVDRLAVRTFVSPFDPITVREALLREKYRGGQAFYVSPRIEDLAGAKDFLDKNIPEVR
                     VAVAHGQMPGTVLDDIMSAFYDGKCDVLLSTTIIESGLDIPTANTLIVHRADRFGLAQ
                     LYQLRGRVGRAKLRAYALLTLPTEKPITPQAERRLKILQSLDTLGAGFQLASHDLDIR
                     GAGNLLGEEQSGHIKEVGFELYQQMLEEAVMSLKAGITAPVADRWSPQITIGTALLIP
                     EDYVADLSVRLALYRRLAEIEDEHEIDGFAAELVDRFGKLPEEVEHLLQVVAIKALCR
                     RANVEKVEAGPKGLVLSFRDNVFVNPDGLIAFIREQGSAVRMRNDPKTAKGQQLVFFE
                     DWPRPQDRLEGTAAVLRRLASIAEQAKAA"
     gene            complement(5842..6150)
                     /locus_tag="VIY07_16600"
     CDS             complement(5842..6150)
                     /locus_tag="VIY07_16600"
                     /inference="COORDINATES: protein motif:HMM:NF015870.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEY6383410.1"
                     /translation="MALETGLNTGTNLSSDGLDARRRRLLFRCRHRGIREMDLVLGRF
                     ADTQLASLTDSELDEVERWLVVPDQQIFAWVAGMEPVPRDFDTALFHRLQSFHNKDAV
                     "
     gene            6300..>6956
                     /locus_tag="VIY07_16605"
     CDS             6300..>6956
                     /locus_tag="VIY07_16605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEY6383411.1"
                     /translation="MRPQVLNPLFGSLTSLSGVGPKLDRLYGRLLDREAPRIIDLLFH
                     LPSGAIDRRARPKLCDALPGQVVTVAVTVDKHRPSPPHRSRVPYRVYTHDDTGDLILT
                     YFNARKDYLQKLLPEGETRYVSGTTEFYDGMLQMVHPDRVVDEKGFAALPLVEPIYPL
                     TEGLALGNVRRAMDGALGRLSDLPEWQDDAWVARERFPTFATALRNLHRPGQPHDIAP
                     D"
BASE COUNT         1343 a         2163 c         2116 g         1334 t
ORIGIN      
        1 ctgacccgcg attgtttctg gcacgacttg aataaagtca ttgtggaggc ctgcgatcgc
       61 agcttgccgc tatcggttgc tcgcttttcg ttcaactcag ctgacgaacg ggcaagcttc
      121 gacgccgcgc ggttgatgac ccgcctcatt cgaaacatcg atttcgcgac ccgcgaggaa
      181 gacggagcaa tcctggttgc tttcacgcag accgatctgc gcagcaagca cgtgatcgct
      241 cgtcgtctgg ccggcattct caagagtgcc atgctgacac agcggcatgc cagcgaggcg
      301 aatgtcactt tggcgacgct caaggcgggc gatactctta accccctgat gatgcgcctg
      361 gcggccgggc gcatggttgc ggccggatag gcggcggcct aggctgctcc caaaaggagc
      421 tcgtcatggc cggtcagcag cccgttcgca tcgatttcgt ctccgatgtg gtctgtccgt
      481 ggtgcttcat aggcaaacgg cgactggaaa aggcaatcgc acttcacccg gaaataccgg
      541 tcgaagtcca ttggcgtccc tacttcctca atgactggat tccgcgcgag ggcatttctc
      601 gcgagcaata cctgacgacc aagttcggtt cgccggagcg ctacaagggg attgcgcaac
      661 gcgtcgctgc ggctgcctcg gccgagggac tgaactatgc gatggacaag atcagccgtc
      721 agcccaacac ccttgacgca caccgcttga tccgctgggc cgaacgagcc ggcaaggcgg
      781 cccagatgaa gcagaagctg atggaccttt acttcaccca aggcgctgat cttaccaatc
      841 atgccgtgct ggttcaggcg gctgcggata tctgccttga cgccgacaac atcaggcagg
      901 cgctcgccag cgaccaggac accgcggaaa tcgaacgcga ggccctttcc gccaaggagg
      961 ccggcatcga gggcgtgccc tgtttcatat tcggcggcaa gttcgccgtc tccggcgcgc
     1021 agacgcctga gtatctcgcc gaagccattg cgcgagtggc ccaggctgcc gacgccgccg
     1081 aataatttct caggcactcg gtcatgaaga tcaccgctgc cgtggtgcac gagcgctcgg
     1141 gcccctttca catcgagcaa cttgacctct gcgatccccg gaacgacgag ttgttggtgg
     1201 aagtcgtcgc gagcgggatg tgcgcaacgg acctgcacgg gcgcgacgcc tattacccca
     1261 cgaaatttcc caaagtcttt ggccatgagg gtgccggcat cgtccgggcg gtcggcaacg
     1321 ccgtaacgag cttcaagcca ggtgatcatg tcgtgatggc ctatccctgg tgcggcgagt
     1381 gtccgaattg caaggcacat cgccaaagtt attgcctgca cgcattcgat ctcaaaatga
     1441 acggcacgcg agcggatggc tcaacgctgc attccaaaaa tggcgctccg gtttacagcg
     1501 ccttttttca gcagtcctcg tttggcagct tcgcgatcgc aaacgagcgc ttcgcagtga
     1561 aagtgcgcgg cgatgcgccg atcgaacaag tctgcgcgct cgcctgcggc ggacagaccg
     1621 gagccggcgc ggtgctcaac gtgatgaagc ccagaagcgg cgaaagcttc gtcgttttcg
     1681 gcgttggcgc tgtcgggctg tccgggctga tggcggccag aatcgccggc tgcgacccag
     1741 ttattgcgat cgatgtgcac gaacaccggc tggcgctggc tcgcgagctt ggcgcaacgc
     1801 acgtcatcaa ccacaaagaa tgcaatgatg tggtgccgca aatcaggacg attaccggca
     1861 gtggggcgca gttctcactg gagacctcgg ccctccctga gatattccgc gaagccgtcg
     1921 attgccttat gcccggtggc gtttgcgtgc tgctcggaag cgcgcgcaag ggcacggaag
     1981 tgtcgtttga aatgcctgtc ctccagaacg gtcgcaccgt ccgcggcgtg attcagggcg
     2041 acagcgtgcc caaagagttc atcccgattc tggtggatca catcatggcg ggccgctttc
     2101 cggtcgagaa gatgatcact ttctatgcgc tttccgacat caaccgcgcc gcggcggaat
     2161 cggctgccgg caagacgatc aagccggtct tgcgcatgcc gcactagtgc aggcctacca
     2221 atatccgttc attcccgcgc aagcgggaat ccagtgcggg cgtccacaac gataggtctc
     2281 cgctttcgcg gggacgaacg gataggatgc gcaaaggcta cgcagccttt gcctgttccg
     2341 caatcgacgc cagcctgcgc aatacggcgg cggttccttc cagacgatcc tgtggccgcg
     2401 gccaatcctc gaagaagacc agctgctggc ctttggcggt cttcgggtcg ttgcgcatgc
     2461 ggactgccga cccctgctcg cggatgaacg cgatcagtcc atccgggttg acgaaaacgt
     2521 tgtcgcggaa tgacagcacg agtcctttag gtcccgcctc gaccttctcg acattcgcgc
     2581 gccgacataa ggccttgatc gccaccacct gcaagagatg ctcgacctcc tccgggagct
     2641 tgccgaagcg gtcaaccagt tcggcggcaa atccgtcgat ctcatgctcg tcctcgatct
     2701 cggcgagacg tcgatagagt gcgaggcgga ccgacagatc ggcgacatag tcctccggaa
     2761 tgagcagcgc tgtgccgatg gtgatttgcg gcgaccaccg atcggcaacc ggcgccgtaa
     2821 ttcccgcctt cagactcatc actgcctctt cgagcatttg ctggtacagc tcgaagccga
     2881 cttccttgat gtggccggac tgttcctcgc cgagaaggtt gccggcgccg cggatgtcga
     2941 gatcgtgcga tgcgagctgg aagcccgcac ccagggtgtc gagcgactgc aaaatcttaa
     3001 gtctccgctc ggcttggggc gtaatcggtt tttctgtcgg aagggtcaac agtgcgtagg
     3061 cgcgcagctt ggcgcgccct acccggccgc gaagctgata gagctgtgcg aggccgaacc
     3121 ggtcggcgcg atgaacgatc agcgtattcg ctgtcggtat gtcgaggccg gattcgataa
     3181 ttgtcgtcga caaaagaacg tcgcatttgc cgtcgtaaaa agcggacata atgtcgtcga
     3241 gcaccgtgcc cggcatctgc ccgtgcgcaa ccgccacacg cacctccggg atattcttgt
     3301 cgaggaaatc cttggcgccg gccaaatcct cgatgcgtgg ggacacgtag aaggcctgac
     3361 caccacgata tttctcgcgc aagagcgcct cgcgcaccgt gatcggatcg aatggcgaga
     3421 caaaagtgcg taccgccagc cgatcgacgg gcggcgacgc aatgatcgaa aggtcgcgca
     3481 cgccggtgag agcgagttgc agcgtacgcg ggatcggcgt tgcggtgagc gtgagcacgt
     3541 gcacttccga gcgcagcgcc ttgagctttt ccttgtgcgc tacgccaaaa tgctgctcct
     3601 cgtcgacgac gagcaaagcc aggtctttga atttgatatt tttgccgagc agtgcgtgcg
     3661 tgccgatgat gatgtccacg ctgccgtcag ccaggcccga cttggccttg tttagctcgg
     3721 gcgtgggcac cagcctcgaa gcctgagcta tgtttactgg aaagccacgg aaccggtcgg
     3781 aaaatgtctt gaagtgctgg cgcgccagca aagtggttgg gaccacgatc gcgacctgtt
     3841 tgccgctgat cgccgtaatg aatgccgcgc gcaaggcgac ttccgtcttg ccgaagccga
     3901 catcaccgca aatgagccgg tccatcggcc gtccggaagc caggtccttg atcgtggcgt
     3961 cgatcgctgc gagctggtcg tcggtttcct catatggaaa gccggcgcag aactcgtcat
     4021 aggcgccggg accgacggtc aggcgcggcg cctcgcgcag ctgccgctca gccgcgatct
     4081 tgatcagttc gccggcgatt tcgcgaatgc ggcttttcat gcgcgctttg cgcgcctgcc
     4141 aattgccccc gcccagccgg tcgagatcga ccgccgtttc ttccgagccg tatcgtgaca
     4201 gcagatcgac gttttcgacc ggcagataaa gcttggcacc ctcggcgtaa tgaatttcca
     4261 ggcaatcgtg cggcgctccc gcggcctcga tcggctgcaa tccctggaag cgtccgatgc
     4321 cgtggtcgac gtgcacgacc agatcgccgg gcgcgaggct tgtcgcctcg gcaatgaagt
     4381 tctccgccct gcgagcggcc cggcgtgggc gaaccagcct gtcgcccagg atatcctgct
     4441 cgctgatgat cgcggcgtct tcggtctcga agccggattc gatgccgagc accgcgaggg
     4501 caaccgtgga ccttggcaga gtcagcgcct gcggccagct gccgaccgag gtgagattgt
     4561 ggaggttgtg gtccgcaagc acatgactca tgcgatcgcg cgcgccatcg ctccacaatg
     4621 caacggacac ccgcttgccc gttgcctgca aggcgagcac gtgagcacct accgcttcga
     4681 acacgttggc cccgggctcg gcacgctcgg cagcgaaatt gcgcccggta cgcgctccaa
     4741 tgttgatggc acccgcgtcg ggcacggcga acggcgttaa ccgggcaagc gccgacccct
     4801 cgagttttgc tttccattcg ctctcgccaa gatacagccg gtcaggcggc agcggcttgt
     4861 agatggggcc cgcgccctcc ttcagcgcat cgcggcgggc gtcgtagtag tcggtaattt
     4921 gcgcgaaccg ctcatgcgcg gcgtcttcga cgagatgttc cagcgccaac gcagtacctg
     4981 gaaggtagtc gaaaatcgtt tgcagtcggt cgtggaacag aggcagccaa tgctccatgc
     5041 cgggatagcg ccgcccctcg ctcaccgatt cgtaaagctg atcgtcggga gctgaggcgc
     5101 cgaactgcgc gacatatccc gtgcggaagc ggcgaatagt gtcagtaatg agctgaaatt
     5161 ctgcgaccgg caccagatcg agcccgcgca gctgctcctc gcttcgctgg gtctccgcat
     5221 cgaaggcgcg gatagtttcg attgcatccc cgaagaaatc gagccgcacc ggcatatcca
     5281 tgccaggcgg ataaagatcg agaatgcctc cccgcaccgc gtaatcgccc ggctcgcgca
     5341 ccgtggaggc tcgaacgaaa ccgttaagct ccagccagtc gataatgccc tgcatgccga
     5401 tgacattgcc gggcgcgacc gataaagcat gggtcgccac aaagtcgcgc gttggcacgc
     5461 gctgcagcga agcattgacg gtggtcagca gaattgacgg tttatcgcgc cctttcacgc
     5521 gtgtaagccg cgacagcacg gtcatccgct gtgccaccac tgcggcgttg ggagataccc
     5581 ggtcgtaagg caggcaatcc caggccggaa attccatcac ctggatgtcg ggaccaaaaa
     5641 atgccagcgc gcgtgacagc gcgcccatcc gctggccatc acggcaaacc acggcaagcg
     5701 atatcggcgg cgcgtccttg cttgccgcga ccgcgcgcgc aagatcagtc agcaccaatc
     5761 cttcggcgcc atcagcgacc tgcgccaaag tcagcggctt gccgcgcttg agtagttcgg
     5821 cgggtgattg tccggactgg ctcacactgc gtccttgttg tgaaagcttt gcagccgatg
     5881 gaacaacgcg gtgtcgaaat ccctcggcac cggctccatt ccagccaccc aggcgaagat
     5941 ctgctgatcc ggcacgacga gccagcgctc gacctcgtcg agttcactat cggtcaatga
     6001 ggccaattgc gtgtcggcaa aacggccgag aaccaaatcc atttcccgga tgcctcgatg
     6061 ccggcatcgg aacaggagac ggcgccgtcg ggcatcgagt ccatcgctgg ataaattcgt
     6121 tccggtattc aaccctgtct ccaacgccaa aaacccggac ggggccgggc tgggatttat
     6181 atagagggcg ggcccttatt tgtcatggga gggcggcaag tccccccaac cggggattgc
     6241 cggaacacgt cccgcgaaga cgatgctgca cgtttcgtga atccactaca ctgcaaccca
     6301 tgcgtccgca ggtgcttaat ccgttatttg gctccctcac cagcctgtct ggggtcggac
     6361 caaaattgga cagactttac gggcggctgc ttgatcggga agcgcctcgc ataattgatt
     6421 tgctgtttca cctgccgtcg ggcgcgatcg atcgtcgcgc gcgacccaaa ttgtgcgatg
     6481 cactgccggg ccaggtggta accgtcgcgg tcacggtcga caagcaccgg ccctccccgc
     6541 cgcatcgctc gcgagtgccc tatcgcgttt acacgcacga tgataccggc gatctcattc
     6601 tcacctactt caatgcacgc aaggactatc tgcagaagct gctgccggag ggcgagaccc
     6661 gctacgtctc cgggaccacc gagttctacg acggcatgtt gcagatggtg cacccggacc
     6721 gcgtggtgga cgaaaaaggc ttcgccgcat tgccgctggt cgagccgatt tatccgctca
     6781 ccgagggact ggcgctcggc aatgtccggc gcgcgatgga tggcgctctc ggaagactat
     6841 cggatttgcc ggaatggcag gacgatgcct gggtcgcgcg cgagagattt cccacatttg
     6901 ctactgcctt acgcaatctt caccggccgg gtcagccgca tgatattgcg ccagat
//
LOCUS       DATDHO010000847         3063 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_88265, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000847 DATDHO010000000
VERSION     DATDHO010000847.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_88265"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..784
                     /locus_tag="VIY07_16610"
     CDS             <1..784
                     /locus_tag="VIY07_16610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HEY6383412.1"
                     /translation="TWFKIKGVNYSISSACATSNHCIGNAAELIQWGKQDVLFAGGCE
                     ELDWSLSVLFDAMGAMSTKFNATPEKASRAYDKDRDGFVIAGGAGVLVLEELEHAKAR
                     GAKIYAEVAGYGATSDGYDMVAPSGEGAVRCMNMALENVKAPVDYINPHATSTPIGDI
                     KEIEAIREVFGPKCPPISATKSLTGHSLGATGVQEAVYSLLMMQNGFICESANIENLD
                     PAFADVPIVRERKDNVKLGCVLSNSFGFGGTNASVVFKRLDA"
     gene            956..1798
                     /gene="fabI"
                     /locus_tag="VIY07_16615"
     CDS             956..1798
                     /gene="fabI"
                     /locus_tag="VIY07_16615"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEY6383413.1"
                     /translation="MAGEQIAPRGTLMQGKRGLIMGVANDHSIAWGIAQTLASQGAQL
                     AFTYQGEALAKRVKPLAERAGSSFLMPCDVEDIASVDAVFDAIKQKWGSMDFLVHAVA
                     FSDKNELKGRYADSTRENFIRTMVISCYAFTEAAKRASALMPNGGAMVTLTYNGGSRA
                     MPNYNVMGVAKAALEASVRYLAVDFGPQKIRVNAISAGPIRTLAGAGITDARYMFAFQ
                     QKYSPLGRGVTLEELGGAGLYLLSDLSTGVTGEIHFVDSGYNVIAMPQPDALKASGAK
                     ENGE"
     gene            1909..2601
                     /gene="aqpZ"
                     /locus_tag="VIY07_16620"
     CDS             1909..2601
                     /gene="aqpZ"
                     /locus_tag="VIY07_16620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007697167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015250 - water channel activity [Evidence
                     IEA];
                     GO_process: GO:0006833 - water transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HEY6383414.1"
                     /translation="MQRELAAEFIGTFSLVSAVCGSALFSAPQAGLIAVAFAVGLSVL
                     AMAFAVGHISGAHFNPAVTCGLVAAGRFPTERAIAYIVVQVLGGAAAAGVFYLVLSGA
                     PPAKWNTFTTISNLYGGGGFSMGAVFLTETVITALFLVVIVGATSPRAPAGFAPIAIG
                     LALTMFHLVAIPISNASLNPARSTATAIFGGAQAINALWLFWVAPILGGAIGGFVCRW
                     LQEEAPSRRARR"
     gene            2641..2886
                     /locus_tag="VIY07_16625"
     CDS             2641..2886
                     /locus_tag="VIY07_16625"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY6383415.1"
                     /translation="MTVHFATTPVLRIAYERGGPVDGAPVILLHGWPDDARTFDGVVP
                     ALQAAGFQTVVPWLRGFGPTSCWMASVIFRRERHRTL"
BASE COUNT          544 a          913 c          951 g          655 t
ORIGIN      
        1 aacctggttc aagatcaagg gcgtcaatta ttcaatctcc tcggcctgcg ccacctccaa
       61 tcattgcatc ggtaacgccg ccgagctgat ccaatggggc aaacaggacg tcctcttcgc
      121 cggcggttgc gaggagctgg actggtcgct gtccgtgctg ttcgatgcca tgggggcaat
      181 gtcgacgaag tttaatgcca cgccggaaaa agcatcgcgc gcatacgaca aagaccgcga
      241 cggtttcgtg attgccggcg gcgccggcgt gctggtgctg gaagaactcg aacacgcgaa
      301 agcgcgcggt gcgaagatct acgccgaagt ggccggctac ggcgcaacgt cggacggcta
      361 cgacatggtg gctccgtcgg gcgagggcgc cgtgcgctgc atgaacatgg cgctcgagaa
      421 cgtcaaagcg ccggttgatt acatcaaccc ccacgcgacc tcgacgccga tcggcgatat
      481 caaagagatt gaggcgatcc gtgaggtatt cggcccgaag tgcccaccga tttcggccac
      541 caaatcgctg accggccact cacttggcgc cactggcgtc caggaagccg tctactccct
      601 gctcatgatg cagaacggct ttatctgcga gagcgccaac atagaaaatc tggatcctgc
      661 gtttgccgat gtgccgatcg tgcgcgaacg caaggacaat gtgaagctcg gctgcgtgct
      721 gtcaaattcc ttcggtttcg gcggcaccaa tgcgtcggtt gtgttcaagc ggcttgatgc
      781 atgacggttt ttcgtgacgc ttccggggcg gcctcgccgt ctgcctcgtc atcggattgt
      841 cgtgtccgcg ccataaacgg gctttcggcg cgccaagcga ttcgatgggg agcctcgcat
      901 gaacaagccc gtttccttgt ccatccttcg atcttttccg ggcaggccga cgaccatggc
      961 tggtgagcaa atcgctccac ggggcacctt gatgcagggc aagcgcggcc tgatcatggg
     1021 ggttgccaac gatcattcga ttgcgtgggg aatcgcgcag acgctcgcgt cccagggggc
     1081 gcagcttgcc tttacctatc agggcgaggc gttggccaag cgcgtcaaac cgctcgcgga
     1141 gcgggccggc tcgtcctttc tgatgccgtg cgacgtcgag gatatcgcat cggtcgatgc
     1201 ggtcttcgat gcgataaaac agaaatgggg cagcatggat tttctcgttc atgcagtggc
     1261 cttctccgac aagaacgaat tgaaaggacg ctacgcggat tctacgcgcg agaatttcat
     1321 ccgcacgatg gtcatctcgt gctacgcctt caccgaggct gccaagcgcg catccgcgct
     1381 gatgcccaac ggcggcgcca tggtgacgct gacctataat ggtggctcgc gtgcgatgcc
     1441 aaactataac gtgatgggcg tggcgaaggc cgcgctggaa gcctcggtgc gctaccttgc
     1501 cgtcgacttc ggtccgcaga aaattcgggt caatgcaatc tcggccggtc caattcgcac
     1561 gctcgccggc gccggaatca ccgatgcgcg atatatgttc gctttccagc agaaatattc
     1621 cccgctcggc cgcggcgtga cgctggagga actgggcggt gccgggcttt acctcctgtc
     1681 ggatctttct acaggggtca ccggcgagat tcattttgtc gattccggct acaatgtcat
     1741 tgccatgccg cagccagacg cgctcaaggc gagcggcgcc aaggaaaacg gcgaataact
     1801 caactaatcc ctgggcctcc ctatctccgc tctgttgccc ttcgtggcgg ggtgttggag
     1861 catggctgcc tggattcgat tgaccgggat ctttctggag atttcagcat gcaacgcgaa
     1921 ttggcagcgg agttcatcgg tacgttctca ctcgtgagcg cagtctgcgg cagcgccctg
     1981 ttttcggcgc cacaagcagg gctgatcgct gtcgctttcg ccgtaggcct ttctgtgctg
     2041 gctatggcgt ttgccgttgg acacatctca ggcgcacact tcaatccggc agtgacctgc
     2101 ggactggtag ccgctggccg atttccgacc gagcgggcga ttgcctatat tgtcgtgcag
     2161 gtgctcggcg gcgcagcagc cgccggcgtg ttctatcttg tgctcagcgg tgcgccgccc
     2221 gcgaagtgga atacattcac caccatttcc aatctgtacg ggggcggcgg attttcgatg
     2281 ggcgcggtct tcctgaccga aacggtgatc acggcccttt tccttgtggt catcgttggt
     2341 gcgacatcgc cgcgtgcacc tgccggattt gcaccgatcg cgatcggcct cgcactgacc
     2401 atgttccacc tggtcgccat tccgatatca aatgcctccc ttaatccggc gcgatcgacc
     2461 gcgacagcga tcttcggtgg tgctcaggca atcaatgccc tgtggctatt ctgggttgcc
     2521 ccgatccttg gcggcgcgat cggcggtttc gtttgccggt ggctgcagga agaggcgcca
     2581 agcaggagag cgcggcgcta gtttttgttt cgcaaccaaa gctgcgagga ttgcgctgcc
     2641 atgacggtgc acttcgcaac gacgcctgtt ctgcggatcg cctatgagcg cggcgggccg
     2701 gtcgatggcg caccggtcat tctgctccat ggctggccgg atgacgcgcg caccttcgat
     2761 ggcgtcgtcc cagcgctgca ggccgccggt tttcagacgg tcgtgccctg gttgcgtggc
     2821 tttggtccga cgtcgtgctg gatggcatcg gttattttcc gacgcgagag gcaccggacg
     2881 ctgtgagccg gctcgtgatc gatttcctca aaacgaaata aaaagggctg tcatggccgg
     2941 gcttctcccg gccgctaaga cgtgaatgcc cggcacaagg caagtgctcg ggccggcctt
     3001 tggccggtcc cgagtgccgg gcatgaccag gagggtcttg cgcgttattc ccgccccata
     3061 agg
//
LOCUS       DATDHO010000848         2420 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_191912, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000848 DATDHO010000000
VERSION     DATDHO010000848.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2420
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_191912"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            1..175
                     /locus_tag="VIY07_16630"
                     /pseudo
     CDS             1..175
                     /locus_tag="VIY07_16630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314465.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail tube protein"
     gene            181..462
                     /locus_tag="VIY07_16635"
     CDS             181..462
                     /locus_tag="VIY07_16635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383416.1"
                     /translation="MNSGIGRSGKVLRRTLRLPDNTGVVTDEVVAAARAIDPRALITA
                     ICDERLHFLQSLKTWPVFGRGWSRRVAEVKSKALKMAADAAKRGVMARK"
     gene            719..1126
                     /locus_tag="VIY07_16640"
     CDS             719..1126
                     /locus_tag="VIY07_16640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383417.1"
                     /translation="MVLSAFLEWLGNLLGGPFARAAVDAYRAKLAAENTSEKIAADLA
                     ARELAVEQRERELANAMVLAEQGRWYTAVPRPLFAIAFIIYVWKVVVWDKVLGLGTTD
                     ALTGDVSQWATIVLTAYFGGRSLEKIVRVLMKK"
     gene            1248..2090
                     /locus_tag="VIY07_16645"
     CDS             1248..2090
                     /locus_tag="VIY07_16645"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sterol desaturase family protein"
                     /protein_id="HEY6383418.1"
                     /translation="MRDFLFAYEPIIRLIAFCGVFAALAVLEFALPLRKQAIGRGWRW
                     PNNLGIVFIDTVLVRILFPTTAVGLAFLAEARGFGLFNALSAPPWLSVVASVVVLDLA
                     IYLQHVLFHAVPGLWRLHRMHHSDLEFDVSTGLRFHPIEILLSMLIKLAVIAAIGAQP
                     LAVLIFEVLLNATSIFNHANIRVPGKVDRVLRWFVVTPDMHRVHHSILVRETNSNFGF
                     NLPWWDRLFGTYRAQPTAGHETMTIGVEQFRDPRDLRMDRMLLQPFLGDVGRYPIGQR
                     DADQ"
     gene            2178..>2420
                     /locus_tag="VIY07_16650"
     CDS             2178..>2420
                     /locus_tag="VIY07_16650"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEY6383419.1"
                     /translation="MDVLEAVSSRYSCRAFLQTPVPEQTVRDIVERAARAPSAGNMQP
                     WRVYAIAGKRVEDLKAALAPRMATELPKGEGTDYTIY"
BASE COUNT          460 a          698 c          693 g          569 t
ORIGIN      
        1 cgtcgacatt acgcacgccg aaagcgccaa ccgttggcgc gagcttctcg atggggcggg
       61 ggtgaagcgc gcctccgtat cgggccgcgg cttgtttaag gacgctgcca gcgacgggct
      121 catgcgtcaa acgttcttcg atggagcgat cgttggatat cagatcgtta tccctacggc
      181 gtgaattccg gcatcggacg cagtggcaaa gttctgcggc gaactctaag gctgcccgac
      241 aacacgggcg ttgtcaccga tgaagttgtt gccgcagcgc gggcgatcga tcccagggct
      301 ttgattaccg caatttgtga cgagcggctg cacttcctcc agtcactgaa gacctggccg
      361 gtttttggtc gtggctggag ccgccgcgtc gcggaggtga aatcaaaggc cctgaagatg
      421 gcagcggatg ccgccaagcg cggcgtcatg gctcgcaagt aagtttaaat caacaattgg
      481 gaattgcatc gatgtggaac aagatcaggt tctggttcag aaattctgtg acaatccttt
      541 gggcgcgtgt gcaggtcctc gcgggccttg ttgtcgcatg cctgatggcg ctcgcttccg
      601 atccaaatgt aactggcgca atccaggctg cccttcagcc aaaatacatt ccgtactacg
      661 tgatcgcgat agggctcatc actgaaatcg cacggcggcg cacagcgagg agcccaaatt
      721 ggtgttatcc gcttttttgg agtggctggg caacctgctc ggcggcccgt ttgcaagagc
      781 cgcggttgac gcgtaccgcg ccaaacttgc agccgaaaac accagcgaaa aaattgctgc
      841 cgatctggcc gcccgcgaat tggcggttga gcagcgcgag cgcgagctgg caaatgcaat
      901 ggttctcgcg gagcaggggc gttggtacac tgcggttccg cggccgctgt ttgcaatcgc
      961 tttcattatt tacgtgtgga aggtcgtagt ctgggacaag gttctggggc tcggcacgac
     1021 cgatgcgtta acgggcgacg tgtcccaatg ggcgacaata gtgcttaccg cctattttgg
     1081 tgggcgcagt ctcgaaaaaa tcgtccgggt tctcatgaag aagtagtcca aatctaattt
     1141 tggtacagcc attgttcggg cgcgcgttcc tcaatcacga aaaatacctc gacgccacta
     1201 aatcggataa gctaccggct tggtggcaat tgctgaaccg gtgcagtgtg cgtgactttc
     1261 tgttcgctta tgaaccaatc atccgtctca tcgcgttctg cggagtgttt gccgccctcg
     1321 cagttttgga attcgcgctg ccactgcgca aacaggcgat tgggcgcgga tggagatggc
     1381 ccaacaatct tggcattgtc tttatagaca ctgtactggt ccgaattctc tttcccacca
     1441 cagctgttgg tctcgctttc ctcgctgaag cgcgcggctt tggcctcttc aatgctttat
     1501 cggctccgcc ttggctgagt gtggtggctt cagtggtcgt cctcgacctc gcgatctatc
     1561 tgcagcacgt gctctttcat gccgtccccg ggctctggcg gctgcatcgg atgcatcact
     1621 ccgatctcga attcgacgtc agcacggggt tgcgctttca tccgatcgag attttgctgt
     1681 cgatgcttat caagcttgct gtgatcgctg cgatcggcgc gcagccgctc gcggttctga
     1741 tattcgaagt gctgctcaac gctacgtcaa tattcaatca cgctaacatt cgcgtccccg
     1801 gcaaagtcga ccgcgttttg cgctggttcg tggtgacgcc cgacatgcat cgcgtccatc
     1861 attcgatcct ggtgcgtgaa accaacagca attttggatt caacctgcct tggtgggacc
     1921 gcctcttcgg tacctatcga gcccagccca ctgccggaca tgaaacgatg acgatcggcg
     1981 tcgagcaatt ccgcgatcca cgcgacctca ggatggatcg catgctgctt cagccttttc
     2041 tcggtgacgt tggccggtat ccgatcggac agcgagacgc cgatcaatag ttctgtattg
     2101 gccgtagacc ctgacccctc ctcttggcac cccgcgttct cctgcccaca ctgtgacgat
     2161 tcgtgtggag cccgcccatg gacgtcctcg aagccgtttc ttcccgctat tcttgtcgcg
     2221 cttttttgca gaccccagtc cccgaacaaa ccgtccgtga cattgtcgaa cgtgccgcgc
     2281 gggcgccttc cgcgggcaac atgcagcctt ggcgcgtcta tgcgatcgcg ggcaaacgcg
     2341 tagaggatct caaggccgcg ctggctccac gaatggcgac cgaattgccg aaaggcgagg
     2401 gtaccgacta caccatttat
//
LOCUS       DATDHO010000849         1505 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_483247, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000849 DATDHO010000000
VERSION     DATDHO010000849.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483247"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            20..334
                     /locus_tag="VIY07_16655"
     CDS             20..334
                     /locus_tag="VIY07_16655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEY6383420.1"
                     /translation="MILVPVQCRMARAALGLGVRELAAAAKVSIDTVARFERGDELKE
                     RTIDALQLALEEAGVEFTNGDQPGVRLTRAAAARSAKAAAPSAATKVVRGQAANALKK
                     KR"
     gene            601..1122
                     /locus_tag="VIY07_16660"
     CDS             601..1122
                     /locus_tag="VIY07_16660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383421.1"
                     /translation="MNRRTHYPALKHGAYSAVAVLPGESKADFDKLHRQLIDEYAPNG
                     VHEEHIISNMAQLIWRLQNFETLCLAKAARDRCQAILVQNMPITDVYARAKERAQDQT
                     QNELGDAYELTEVGEAATFDGVMKELEIREHLEAAIARCLKQFLMVRGVKSIRAAPPS
                     PSPKRITGPSEAA"
BASE COUNT          355 a          413 c          425 g          312 t
ORIGIN      
        1 ctgaaatcgg aacagtatta tgattctagt acctgttcaa tgccgtatgg cccgtgcggc
       61 gctgggattg ggtgttcgag agctcgccgc agctgccaag gtgtcgatcg acacagttgc
      121 caggtttgag cggggagatg aattgaagga gcgaacaatt gacgccttac agctggcact
      181 cgaagaagcc ggagttgagt tcaccaatgg cgatcagcct ggcgtccgcc ttaccagggc
      241 cgccgccgcg cgctccgcaa aagccgccgc gccatcggct gctacgaaag tagtccgcgg
      301 tcaagctgcc aatgcgctca agaaaaaacg atagataccg gcttcgggtt tggccttata
      361 gcctattgca gtgatcttcg agtcgggcgg cgtcgaattc atcgacgaga acggcggcgg
      421 ccccggtgtg cgcctccgca agcgccagcg atccaaaaag cccagtcgca cctcgatgca
      481 aaattaagcg gcatatagtg accacgtttg gcttacaacc cttggaccga catgcatttc
      541 gagctacctg gcctaggaaa ggcgtacaca cgctgtgaca tcaaactagg tagctcaaca
      601 atgaacagac gcacccatta tcccgccctc aaacatgggg cctattcggc tgtcgccgtt
      661 cttcccggcg aaagcaaagc cgatttcgac aaactgcatc ggcagctgat tgacgaatac
      721 gctccgaacg gagttcacga ggagcacatc atctcaaata tggcgcagct gatctggcgg
      781 ctgcaaaatt ttgagacgct gtgtttggcg aaggccgctc gcgacaggtg ccaggcaatc
      841 ctcgtgcaga atatgccaat tacggatgta tatgcgcggg ccaaggaacg cgcacaagac
      901 cagactcaga acgagcttgg agatgcgtac gaattgactg aagttggtga agccgccacg
      961 ttcgacggcg ttatgaaaga gctggagatc cgagagcatt tagaggctgc tattgcgcgg
     1021 tgtctgaaac aattcctgat ggtacgtgga gtaaaatcta ttcgtgccgc gccgccatcg
     1081 ccatctccga agcgcattac tggcccgtca gaggcggcgt gacggataag cattacgaat
     1141 tctccgctcc tttccttgcg agttgcgccc acatcaaata caattacagg ttgtttttct
     1201 ttggaatgaa aacaagaaca gctatgtatt cagtaactta cgattttccc ctggtcccga
     1261 acaggtgaga tctcaggtcc aacgcatgcc gcttcagttg gtgatttgac aacgaaatcg
     1321 gccgaaccat tttggcagaa cgaagccagt cggacggcat tgtagcgtga gtgcttgcct
     1381 tgcccctgag ggcgttgcgc cgattagcct cgatctgcct gacagggaag ctagtcggcc
     1441 agtgaccgac aggcccctga ccgactaggc cgttggctgg cgctcccggg cgccgcgacc
     1501 cggcg
//
LOCUS       DATDHO010000850         9267 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_239305, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000850 DATDHO010000000
VERSION     DATDHO010000850.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 9267)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9267)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9267
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239305"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..910
                     /locus_tag="VIY07_16665"
     CDS             <1..910
                     /locus_tag="VIY07_16665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HEY6383422.1"
                     /translation="LGLKEDEAIIHPWINKALEKAQQKVEARNFDIRKNLLKFDNVMN
                     DQRKAIFEERLELMRDEAVDETVNGMRHSVIEDMVTKHLPANAYAEQWDVAGLDEALK
                     GVLTLDLPVKDWAKEEGIADEEVRERIERRADEWMASKVAKWGPDVMRYVEKSILLQT
                     LDHLWREHLVMLEHLRQVIGLRGYGQRDPLNEYKAEAFALFEAMTARLREAVTAQLMR
                     VEVVQAPPAEEAAVLPYMEAHKVDPLTGEDEMAPALAPALVGNGNGMQAERKASDPSS
                     WGKVGRNEPCPCGSGKKYKHCHGRFG"
     gene            complement(938..1195)
                     /locus_tag="VIY07_16670"
     CDS             complement(938..1195)
                     /locus_tag="VIY07_16670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEY6383423.1"
                     /translation="MDCYVYVIGTLTNTRHLTYVGWTENVTRRVAAHNAGKGARSTRG
                     RAWVLLYSERCASKRHAMSREWHLKRNRAFRKKLALGQFGT"
     gene            complement(1227..2816)
                     /locus_tag="VIY07_16675"
     CDS             complement(1227..2816)
                     /locus_tag="VIY07_16675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY6383424.1"
                     /translation="MHRPLARALLASAAVAAAIVLAGCDGESISPTGRAKAPLSEKMI
                     AEISAKNMEKESPILARIFKEESEMEIWKQNRDGQFALLKTYPICRWSGDLGPKKKQG
                     DRQAPEGFYTITPGHMNPNSSYYLAFNTGFPNAYDRAMGYTGSDLMVHGDCSSRGCYA
                     MTDEQITEIYALARESFFGGQKSFQLQAFPFRMTALNMAKHRNNPNFAFWKMLKEGYD
                     HFNATHQEPKVAVCDRRYVYDAVAPNDSGKALSFNATGACPAYQLDKNVADAVLDVRR
                     QEQYKMAEYIANGVSTVPSRAGQDGGMNPVFVAKLTPQTGFDNNGRAYQVASMPGMLP
                     RVAEAPGALPRDTAPPAAAAEAPAKREPATTASKPVAVANVPVPRSAPQAKQGEAPEM
                     EQKPTTIAGLIGSWFSGSKETSASPPEKEQAAVRGANTDLAARPKQVVAPVRPTAPAT
                     TVSTASTVAPASKPRDPAPKPAEATARAPAPTAQVQTAKAEPPQQPELRTAYSTPPAS
                     NNGLLTGAQPVVPVGSFSSFR"
     gene            complement(2949..3905)
                     /locus_tag="VIY07_16680"
     CDS             complement(2949..3905)
                     /locus_tag="VIY07_16680"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEY6383425.1"
                     /translation="MRSYLDFEKPVAELEAKVEELRAMGETGNAVAIGEEISRLESKA
                     ALALKDLYADLTPWQKTQVARHPQRPHCLDYIAGLVSGFIPLAGDRKFGDDAAIVGGF
                     GRFRGESVCVIGHEKGSDTESRLKHNFGMARPEGYRKAVRLMEMADRFDIPVISLVDT
                     AGAYPGIGAEERGQAEAIARSTDTCLALGVPNIAVILGEGGSGGAIAIATANRVLMLE
                     HAIYSVISPEGAASILWRDTAKAQEAATGMKITAQDMVRFGVIDTIVPEPTGGAHRDP
                     QAAIALTGEAIGNALADLQGLDREAVRKQRREKFLAMGRNGS"
     gene            complement(4001..4948)
                     /locus_tag="VIY07_16685"
     CDS             complement(4001..4948)
                     /locus_tag="VIY07_16685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEY6383426.1"
                     /translation="MTRRQRASDETVVELFLDMLAAERGAGENTISAYRNDLDDLSAH
                     LRATGHTIANATTDDLRGFLVSLSERGFKASSLARRLSAVRQLYRFLYAEGQRSDDPA
                     AVLEGPKRERALPKVLSIKDVDTLLKQARAHSDNKNQPLAQQLRAARLLCLLEVVYAT
                     GMRVSELMALPASAARRDQRMLVVRGKGGKERLVPLNTQAKRAMSEYLELRAESERDS
                     PSKWLFPSFGAQGHLTRQHFARELKSLGQACGIQPGRLSPHVLRHAFASHLLHNGADL
                     RVVQTLLGHADISTTQIYTHVLEERLKALVRDLHPLSGN"
     gene            complement(4971..5120)
                     /locus_tag="VIY07_16690"
     CDS             complement(4971..5120)
                     /locus_tag="VIY07_16690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008144572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEY6383427.1"
                     /translation="MPSLFRFLIFLGLLVGLGYGAVFSLATFVTYKPREIIVTIPPDK
                     FIKNH"
     gene            5267..5851
                     /locus_tag="VIY07_16695"
     CDS             5267..5851
                     /locus_tag="VIY07_16695"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018452923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEY6383428.1"
                     /translation="MVNGAIQKPAENAPESALVRALGSRSIVLVGMMGAGKSSIGRRL
                     AGRLGLPFIDADSEIESAAGMTISEIFDKHGEPYFRAGEARVIARLLDNGPQVLATGG
                     GSLLDAHTRALIGEKGVSIWLKADIEVLLKRTKRRTDRPLAEKIRDLLPVREPLYAQA
                     DIIVQSRDEPHDNIVDEIMGQLPKHLGLGAGKPS"
     gene            5848..6978
                     /gene="aroB"
                     /locus_tag="VIY07_16700"
     CDS             5848..6978
                     /gene="aroB"
                     /locus_tag="VIY07_16700"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEY6383429.1"
                     /translation="MTAPLRPTEPNVVSVALGTRAYDIAIGRGLLTSLGERIKTLRPG
                     ARTAIVTDETVAKIHLNAAEAALKSAGIDSARIVVPAGENSKNYPTFENVCEAIIAAR
                     VERNDLVVALGGGVIGDLAGFAASCVRRGVDFVQVPTTLLAQVDSSVGGKTGINSRQG
                     KNLIGAFHQPVLVIADTAVLDTLPKREFRAGYAEVAKYGLLGDAAFFAWLEKNWQDVF
                     AGGPAREHAIAVCCRGKAGIVARDERETGERALLNLGHTFGHALEAGFGFSDRLLHGE
                     AVALGMALAFAFSSQKGLISGEDVARVRAHLAAVGLPTHVKDVPGAAPGADALMDLIA
                     QDKKVKRGTLTFILVRGIGQAFIENNVGPAEVRAFLDAQLSR"
     gene            6987..8312
                     /locus_tag="VIY07_16705"
     CDS             6987..8312
                     /locus_tag="VIY07_16705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM domain-containing protein"
                     /protein_id="HEY6383430.1"
                     /translation="MVGTIVNILIAIFLLAANAFYVAAEFALVKSRGYRINVMAEQNR
                     FGARLLQRMMGNIEAYLACCQLGITMASLGLGWVGEPTVSALLTPLLRPLGMGDAALH
                     FTSFMVGFLVFSSLHIVVGEQVPKTLAIREPVPVSQWIAYPLHASFILFYPLNWLLNT
                     ASRSILSLLGVKEGSQQEILTDVEIEGLVETSAEHGTLEEIQAEYIQNVFRFGELEVS
                     DVMVHRTNMITLNADDPPEDIVNAVIASPVTRLPLWRGNPENIVGILHVKDLLRALHA
                     VEGDASKIDVASLMTPPWFVPETRPVSEQLKAFRRRKTPFALVVDEYGEVEGLVTLED
                     ILEEIVGDITDEHDVAMPGVRRQPDGSVNVDGAVPIRDLNRVMDWNLPDDEATTVAGL
                     VIHEARSIPEVGQSFTFHGFRFRVLRRARNRITALRIQPLPRTQPAMSG"
     gene            complement(8323..8598)
                     /locus_tag="VIY07_16710"
     CDS             complement(8323..8598)
                     /locus_tag="VIY07_16710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HEY6383431.1"
                     /translation="MRTTDLITKKLTEAFAPESLKVLDESHQHEGHAGHRPGGQTHYR
                     VYIVSKAFKGKTRLERHRMINQLLASELAGGVHALAIQAAAPGEGGV"
     gene            8706..>9267
                     /locus_tag="VIY07_16715"
     CDS             8706..>9267
                     /locus_tag="VIY07_16715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEY6383432.1"
                     /translation="MKFDSPLFDRIRVKPEKDRRPKTGGPGCEWHGCKEKATHRAPKG
                     RGREKEYWRFCLNHVREYNQSYNFFAGMSDAAVMAYQKDALTGHRPTWKMGTGKGTMR
                     PDMRAFGTHADPFGLFGEGVRAEQKARAEARPIRNAERKALDTLGLEVGATSQQVKMR
                     FKELVKRHHPDANGGDRSTEDRLVEII"
BASE COUNT         1791 a         2716 c         2888 g         1872 t
ORIGIN      
        1 gctcgggctg aaagaggacg aggccatcat ccatccctgg atcaacaagg cgctggagaa
       61 ggcgcagcag aaggtcgaag cccgcaactt cgacatccgc aagaatctgc tgaagttcga
      121 caacgtgatg aacgatcagc gcaaggcaat cttcgaggag cggctcgagc taatgcgcga
      181 cgaggcggtg gacgaaaccg tcaacggcat gcgccactcg gtgatcgagg acatggttac
      241 caaacatctc ccggccaatg cctatgccga gcaatgggat gtcgcaggcc tcgacgaagc
      301 gcttaagggc gtgctgaccc tcgatttgcc ggtcaaggac tgggcgaagg aagaaggcat
      361 tgccgacgag gaagtgcgcg agcgcatcga gcgacgggcc gacgaatgga tggcgtcaaa
      421 ggtcgccaaa tggggccccg acgtcatgcg ctacgtcgag aaatctatct tgcttcagac
      481 actcgatcat ctttggcggg aacacctcgt gatgcttgag catctgcgtc aggtgatcgg
      541 cttgcgcggc tatggtcagc gcgacccgct gaacgagtac aaagctgagg cctttgcgtt
      601 gttcgaagcc atgacggcgc gcctgcgcga agcagtcact gcgcaactca tgcgcgtgga
      661 ggtcgtgcaa gctccgccgg ccgaggaggc cgcagtgctt ccctatatgg aggcacacaa
      721 ggtcgatcct ctcaccggcg aagatgaaat ggcgccggcg ctggcaccgg ccctggtggg
      781 gaacggcaat ggcatgcaag ccgaacgcaa ggcgagtgac ccgtcgagct ggggcaaggt
      841 tggacgcaac gaaccctgcc cgtgcggctc gggcaaaaag tacaagcact gccacggcag
      901 atttggctga agccgcccaa gcacgcagtc ggctatctca cgtgccgaac tggccaagag
      961 ccagcttttt tcggaaagcg cgattgcgct tgaggtgcca ttcgcgactc atagcgtggc
     1021 gcttgcttgc gcagcgttcc gaataaagca gcacccatgc gcgaccgcgc gttgagcgcg
     1081 cgccttttcc agcattatgc gcggccactc gacgggtcac gttttcggtc cagccgacat
     1141 aggtcaggtg gcgggtgttc gtgagggtgc cgatgacata gacgtagcag tccatgattc
     1201 gtgcgccctg gcgctgtcga atgcgattac cggaagctgc tgaaggagcc aaccgggacg
     1261 accggctgag cgccggtgag caacccatta ttgctcgccg gcggtgtgga atatgcggta
     1321 cgcaattccg gctgctgcgg cggctccgct ttcgcggtct gcacctgtgc ggtcggcgcg
     1381 ggcgctcggg cggtagcctc cgccggtttt ggcgcagggt cgcgcggctt cgaagccggc
     1441 gcgacggtgg atgcagtgct gacagttgtt gcaggggcgg tcgggcgcac cggggcgacg
     1501 acctgcttgg gccttgccgc cagatcggta ttggcgccac gcaccgcggc ttgctctttc
     1561 tcaggaggcg aggctgaggt ttcctttgat ccgctgaacc agctgccaat caatcccgca
     1621 atcgtggttg gcttctgttc catttcggga gcttcgcctt gcttggcctg cggcgcggac
     1681 cgcggcacag gcacattcgc gactgccacg ggcttgctgg ccgttgtcgc gggctcccgc
     1741 tttgccggcg cttccgcagc cgcggccggc ggcgcggtgt cgcggggcag cgcacccggt
     1801 gcttcggcca cgcgcggcag catgcccggc atactcgcca cttgatacgc acggccgttg
     1861 ttgtcgaaac ccgtctgcgg cgtcagcttg gcgacgaaca ctggattcat gccgccatcc
     1921 tggcccgcgc gggatggaac ggtcgaaaca ccattcgcga tgtattcggc catcttgtat
     1981 tgctcttgcc gccgcacatc gagcaccgca tcagcgacgt tcttgtcgag ctgataagcc
     2041 ggacatgcac ccgtcgcgtt gaatgaaagc gccttgccgg aatcgttcgg tgctaccgca
     2101 tcgtagacat aacgcctgtc gcaaaccgcg accttcggct cctgatgggt ggcattgaaa
     2161 tggtcgtacc cttctttcaa cattttccag aacgcgaagt tcggattgtt tcggtgcttc
     2221 gccatgttca acgcagtcat gcggaacgga aaagcttgca actggaacga cttctgcccg
     2281 ccgaagaacg actcacgcgc cagcgcgtag atttccgtga tctgttcatc ggtcatcgcg
     2341 tagcagccgc gcgacgagca atcgccatgc accatcaggt cggacccggt gtagcccatg
     2401 gcgcggtcgt aggcgtttgg aaagccggtg ttgaaagcga gataataact ggagttggga
     2461 ttcatgtgcc cgggcgtgat ggtgtagaag ccttcgggcg cctgtcgatc gccttgcttt
     2521 ttcttcggtc caagatcccc ggaccagcgg cagatcggat atgtttttaa cagcgcgaac
     2581 tggccgtccc gattctgctt ccagatctcc atctccgatt cttccttgaa gatgcgagcc
     2641 agaatcggag attccttctc catattcttt gccgaaatct cggcgatcat cttttcggaa
     2701 agcggagcct tggcgcggcc tgtgggagaa atgctctcgc cgtcacatcc ggctaggaca
     2761 attgcagcgg caacggccgc cgacgccagc agcgcgcgag cgagaggtcg atgcaaaagc
     2821 tgatactccc cgaagcggcg gtcccgtagt ccccaatggt tacccagaag atgtggcatc
     2881 cgcaaggcgg tcccccctat ccctgcttac cgctaaccca tggtagtcaa aagtaaatta
     2941 gcaacccgtt aactgccatt gcggcccatc gccagaaact tctcgcggcg ctgtttacgg
     3001 accgcttcgc ggtcgagccc ctgaaggtcg gcaagggcat tgccaatggc ttctccagtc
     3061 agggcaattg ccgcctgagg gtcgcggtgg gcccccccgg tcggctcggg cactatggtg
     3121 tcgatgacgc cgaaacgcac catgtcctgg gcggtgattt tcatgccggt agctgcctct
     3181 tgcgccttgg ccgtgtcgcg ccaaaggatc gaggcggcgc cttcggggga aataacactg
     3241 tagatcgcat gctccagcat caggacgcga ttggctgttg caatcgcaat cgcgccgcca
     3301 gagccgcctt cgcccaatat caccgcaatg ttgggaaccc ccagcgccag gcacgtgtca
     3361 gtcgaacggg cgatcgcttc cgcctgaccc cgctcttccg cgccaatgcc gggataggct
     3421 ccggcggtgt ccaccagcga tattaccgga atgtcgaagc ggtcggccat ttccatcaac
     3481 cgaacggcct ttcggtaacc ttccgggcgc gccattccga agttgtgctt gagccggctt
     3541 tcagtatcgg agcccttttc gtgcccgatg acgcagacgc tttcgccgcg aaaccggcca
     3601 aagcccccga cgatcgcagc atcgtcgccg aatttgcggt cgccggcgag gggaataaag
     3661 ccgctgacca agccggcgat gtagtcgagg cagtgcggcc gctgcggatg ccgggcgacc
     3721 tgagtcttct gccagggcgt gagatcggca tacagatcct tcaaggccaa cgcggccttt
     3781 gactcaagcc tgcttatttc ttcgccgatg gcgaccgcgt tgcctgtctc gcccatcgcg
     3841 cgcaattctt cgaccttggc ctcgagctcg gccaccggtt tttcgaagtc gagatagctg
     3901 cgcattgggg tccgtgcggg tgcttttcgg agcgtagtga cgtgggcgaa gggcttaagt
     3961 caagcaaacg ggtcaatttc gctgttgtga atggtcctgg ctagtttccc gacagcgggt
     4021 gcaaatcgcg caccagcgct ttcagccgct cttccagcac atgagtatag atttgcgtgg
     4081 tcgaaatatc tgcgtgtccg agcagggtct gcaccacgcg caggtcggcg ccattgtgca
     4141 acaaatgact ggcgaaggca tggcgcagca cgtgcgggct cagacgtccg ggctgaatgc
     4201 cgcaggcctg gccgagcgat ttgagttcgc gggcgaaatg ctgtcgggtg aggtggcctt
     4261 gcgcgccaaa agaagggaag agccatttcg atggcgagtc gcgttcactt tctgcacgca
     4321 attcgaggta ctcggacatc gcgcgtttgg cctgcgtgtt gagcggtacg agacgctcct
     4381 tgccgccttt gccgcgcaca accagcatgc gttgatctcg tctggctgcc gacgccggca
     4441 aagccataag ctccgacacg cgcattcccg tggcgtagac gacttccaaa agacatagca
     4501 gacgcgcggc gcgcagctgc tgggcaagcg gctggttctt gttgtcgcta tgcgctcgcg
     4561 cctgcttcag cagggtgtcg acatccttta ttgaaagcac tttcggcaac gcgcgctcgc
     4621 gcttcgggcc ctcgagaaca gcagcgggat cgtcgctgcg ttgtccctct gcatagagaa
     4681 accggtaaag ttgccgaacc gcagagagac gccgcgcgag cgacgaggcc ttgaagccgc
     4741 gctcggataa gctcacgagg aatccgcgca ggtcgtcggt ggtggcattg gcaattgtgt
     4801 gacctgtcgc gcgcaaatgc gccgacagat cgtcgagatc gttgcgatag gcagaaattg
     4861 tattttcgcc cgcgccgcgc tcggctgcga gcatgtcgag aaacaattcg accactgttt
     4921 cgtcggatgc tctttgccgg cgggtcatcg cgtcggctgg tctccgggcg tcagtgattc
     4981 ttaatgaact tgtcgggtgg aatggtcacg atgatctcgc gcggcttgta agtcacgaag
     5041 gtggcgagcg agaacaccgc gccgtagccg agcccgacga gcaacccaag gaagatcaga
     5101 aatctgaaca ggctcggcat cgtcaaaccc ggcaagcgtc cgtcaggtca gcgcctaagg
     5161 ttttaggcaa gtgacgacca aattccgcaa cgaccggcaa gacggcctcg cggttgacgc
     5221 gataactggt atatggaacc cgtggattcg cttggaaaac catagcatgg ttaacggcgc
     5281 cattcaaaag ccggcggaaa acgcccccga atcggcgctg gttcgtgcgc ttggcagccg
     5341 gtcgatcgtg ctcgtcggca tgatgggtgc gggcaaatca tcgattggcc gaaggcttgc
     5401 cggacggctc ggacttccct tcattgatgc cgacagcgaa atcgaaagtg ccgcaggcat
     5461 gacgatctcc gaaattttcg acaagcacgg tgaaccatat ttccgtgccg gtgaggcgcg
     5521 cgtcattgcg cgcttgctcg acaatggccc gcaggttctg gccacaggcg gtggttcgct
     5581 gttagacgcg cacacccggg cgctgatcgg agaaaagggc gtttcgatct ggttaaaagc
     5641 cgacatcgag gtgttgctga aacgcacaaa gcgccgcacc gaccgtccgc ttgcggaaaa
     5701 gatcagggat ctgctgcctg tgcgtgagcc actctatgca caggccgata tcatcgtgca
     5761 atcgcgtgat gaaccgcacg ataatatagt cgacgaaatc atgggccagc tgccaaaaca
     5821 tctcggtctt ggtgcgggga agccatcgtg actgctccat tgcggccgac cgagccgaac
     5881 gtggtaagcg tcgctctggg gacgcgcgcg tacgacatcg cgatcggtcg tggtctgctg
     5941 acgagccttg gggaacgcat caagacactg cgcccgggcg caagaacggc gatcgtcacc
     6001 gacgaaacgg ttgcaaagat tcatctgaac gccgccgaag ccgcgcttaa gtccgccggc
     6061 atcgacagcg cccgcatcgt tgtgccggca ggcgagaact caaagaatta tccgacattc
     6121 gaaaatgtct gcgaagcgat catcgctgct cgcgtcgaaa gaaacgatct tgtcgtcgcg
     6181 ctgggcggcg gcgtcatcgg cgacctggct ggattcgctg cgtcttgcgt gcggcgcggg
     6241 gtggatttcg tgcaggtgcc gacgaccctt ctcgcgcaag tcgattcctc ggtcggcggc
     6301 aagacaggca tcaattcgcg ccagggcaag aatctgatcg gcgcctttca ccagccagtg
     6361 ctggtcattg ctgataccgc agtgctcgac acgctgccaa agcgcgaatt tcgcgccggc
     6421 tacgccgagg tcgccaagta tggattgctc ggcgacgcgg cttttttcgc ctggctggag
     6481 aagaactggc aggacgtgtt tgcgggagga cctgcgcgcg agcacgccat tgcggtttgc
     6541 tgtcgcggca aggcgggaat cgttgcgcgc gatgagcgcg agaccggcga gcgtgccctg
     6601 cttaacctgg gtcacacctt cggccatgct ttggaagcgg gcttcggatt ctccgaccgg
     6661 ttactgcatg gagaggcggt ggcacttggc atggctttgg cattcgcgtt ctcgtcacaa
     6721 aaaggattga tttccggcga ggacgttgcc cgcgtgcgcg cgcatcttgc agcggtcggc
     6781 ctgcccaccc atgtaaagga tgtgccgggc gctgcgccgg gcgccgatgc cttgatggat
     6841 ctgatcgctc aggacaaaaa agtcaaacgc ggcacgctca cctttattct ggtgcgcggt
     6901 atcggtcagg cctttatcga aaacaatgtc ggcccggccg aggtacgggc atttctcgac
     6961 gcgcaattgt cgcgatgagt gcgccgatgg tcggcacgat cgtcaatatt ctgatcgcaa
     7021 tattcctgct tgctgccaat gcgttctatg tggcggctga gttcgctttg gtgaaaagca
     7081 ggggctaccg cataaacgtc atggccgagc agaatcgctt cggcgcacgc ctgctgcaaa
     7141 gaatgatggg caatatcgaa gcctatctcg cgtgctgcca gcttggcatc accatggcgt
     7201 ctctcggtct gggctgggtt ggagagccca cagtctcagc gctgctgaca ccgctcctaa
     7261 ggccgctcgg catgggtgat gcggcgttgc atttcacgtc gttcatggtc ggcttccttg
     7321 tgttctcttc gctgcacatt gtcgtcggcg aacaggtgcc gaagaccctg gcgatcagag
     7381 aaccggtgcc cgtttcgcag tggattgcgt atcctcttca cgcttcgttt attcttttct
     7441 acccgttgaa ctggcttctc aacacggctt cgcgctccat cctgagcctg cttggcgtca
     7501 aggaaggttc gcagcaggaa atcctgaccg acgtcgagat cgagggactg gtggagacct
     7561 ccgccgagca cggcacgctg gaggaaattc aagccgaata tatccagaac gttttccgct
     7621 ttggcgagct tgaagtttcc gacgtgatgg ttcatcgcac caacatgatc acgctgaacg
     7681 ccgatgatcc ccccgaagat attgtcaacg cggtgatcgc ctcacctgtc acgcggcttc
     7741 cgttatggcg cggaaacccg gaaaacattg ttggcatttt gcatgtgaag gatttgttgc
     7801 gcgcgttgca tgcggtcgaa ggcgacgctt ccaagatcga cgttgcttca ctgatgacgc
     7861 cgccgtggtt cgtaccggag acgcgcccgg tttcggaaca gctcaaggcc ttccgccgcc
     7921 gcaagacacc ctttgcgctc gtggtggacg aatatggcga agtcgaaggt ctggtgacgc
     7981 tggaagatat tcttgaggag atcgttggag acatcaccga cgaacacgat gtcgccatgc
     8041 ctggcgtgcg gcgtcagccc gacggttcgg ttaacgtcga tggcgctgtt cctatccgcg
     8101 atctcaatcg ggtcatggac tggaatttgc ccgacgacga ggcgacgact gtcgccgggc
     8161 tggtcatcca tgaagcgcgc tcaattcccg aggtagggca aagcttcact tttcatggct
     8221 tccgtttcag ggtcttgcgg cgtgcacgca atcgcatcac cgcgttgcgt attcagccgc
     8281 tccccagaac gcagcccgcg atgtccgggt aaccggcgct attcaaactc caccttcgcc
     8341 gggcgcggcg gcctggatgg cgagtgcgtg aaccccgccc gcgagttcgc tggcaagcag
     8401 ctggttgatc atgcggtgcc gctcgagccg ggtctttcct ttgaaagctt tcgatacaat
     8461 atagacgcgg tagtgagttt gcccgcccgg cctgtgtccg gcatggcctt cgtgctggtg
     8521 agattcgtcc agcactttaa ggctttccgg cgcgaaagct tcggtcaact tcttcgtgat
     8581 gagatcggtg gttcgcatgt tgcccgctta ggagagggca gggtgcgggt caatggttgg
     8641 cattgttcgg cctgtcacga tcaagccttg aaggcgtcac ccgcaaaagc gcataatggt
     8701 cggtcatgaa attcgactca cctctttttg accgtatccg cgtcaagccg gagaaggatc
     8761 gccgtccgaa aaccggtggc ccgggctgcg aatggcatgg ctgcaaggaa aaagcgacgc
     8821 accgcgcgcc aaaaggccgg ggccgcgaaa aggagtactg gcgtttctgc ctgaaccatg
     8881 tgcgcgaata caatcagtcc tacaacttct tcgccgggat gagcgatgcg gcggtgatgg
     8941 cctaccagaa ggacgcgctg accggccacc gccccacctg gaagatggga accggcaaag
     9001 gcacgatgcg gccggacatg cgtgctttcg gcactcacgc cgatccattc ggcctgttcg
     9061 gcgaaggtgt cagggccgaa cagaaggcac gcgcggaagc ccgaccgatc cgcaacgcgg
     9121 agcgcaaggc tctcgatacg ctgggacttg aggtcggcgc cacttcgcag caggtgaaga
     9181 tgcgcttcaa ggaattggta aagcgccacc atcccgatgc caatggcggc gaccggtcga
     9241 ccgaggatcg gctagtcgag attatcc
//
LOCUS       DATDHO010000851         2132 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_40957, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000851 DATDHO010000000
VERSION     DATDHO010000851.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_40957"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..695)
                     /locus_tag="VIY07_16720"
     CDS             complement(<1..695)
                     /locus_tag="VIY07_16720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbosone dehydrogenase family protein"
                     /protein_id="HEY6383433.1"
                     /translation="MSPCLTAKRSILLAGIAGFLVAAPAFGQQPPASPPPAAPPPAAA
                     PAAPQALPPGSPLIGRPEGNPAAAKLAPIVAPPIPAAADKLPTAKLKLPPGFNIEVYA
                     SGIANTRSLRVGDNGTVFVGTRLGNKVTAVVKKDGKTETKAIAEGLYRPNGLAYHKGT
                     LYIAELSQISKIENIENVLDNPPKPTVIYKDLPKDEAHGWKFIAVGPDEKLYLEVGQP
                     GNNVLNSDAHGQIR"
     gene            complement(827..1912)
                     /gene="pqqE"
                     /locus_tag="VIY07_16725"
     CDS             complement(827..1912)
                     /gene="pqqE"
                     /locus_tag="VIY07_16725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HEY6383434.1"
                     /translation="MTTNGLSVPTPLGLLAELTHRCPLGCPYCSNPLALDKRADELDT
                     ATWARVFREAAALGVLQVHLSGGEPAARRDLPDIVKAAREASLYSNLITSAVGLTPQT
                     LASLADAGLDHVQISIQDSDESSADHIAGYKGASVRKRALAKEVVRLGLPLTINMVVH
                     RANIGRIETMVELALSLGASRVEIAHVQYYGWGMKNRAALMPTREQVEEAVRTVEMLR
                     DRHRGQIVIDAVVPDYYARFPKPCVGGWGRRSLNVTPAGRVLPCHAAEVIPGLEFWNV
                     REHSLADIWRASPAFLAFRGTDWMREPCKSCPRREQDFGGCRCQAFMLTGDARATDPV
                     CHLSPEHAIVAQAAAERADEAYEYRRL"
BASE COUNT          389 a          666 c          687 g          390 t
ORIGIN      
        1 cggatctggc cgtgcgcatc gctgttcagc acattgtttc ccggctggcc tacctcaagg
       61 tagagcttct cgtcaggtcc gacggcgatg aatttccagc cgtgcgcttc gtccttcggc
      121 aaatccttgt agatcaccgt cggctttggc ggattgtcga gcacgttctc gatgttctca
      181 atcttggaga tctgcgagag ctcggcgatg tagagtgtgc ccttgtgata tgcgagaccg
      241 ttggggcgat acagcccttc cgcgatcgcc ttggtctcgg tcttgccgtc cttcttgacg
      301 actgcggtga ccttgttgcc caaacgggtg ccgacgaaca ccgtgccgtt gtcgccgaca
      361 cgcaacgaac gtgtattcgc aatcccgctg gcatagacct cgatattgaa gcccggcggc
      421 agcttgagct tggcagtcgg cagcttgtcg gcggccgccg ggatcggcgg cgcgacgatc
      481 ggcgcaagct tcgcggcggc ggggttgccc tcgggccggc cgatcaaggg cgacccgggc
      541 ggcaaagcct gcggtgccgc gggcgctgcg gccggcggcg gcgccgctgg cggcggcgat
      601 gcgggcggtt gttggccaaa agccggagcg gccaccagga agccggcgat accggcaagc
      661 aaaatagaac gttttgccgt gagacacgga ctcatcgaat tcctccctta cgtggaggtg
      721 cttgtctcgc gaggtcccac tgaagggccc cggagcgctc ctcctgcgac gacaagtctc
      781 cacctttcaa ttttcttttg caatcgggga tcgacagttc cgcagattac agacgtcgat
      841 attcgtacgc ctcgtctgcg cgttcagccg cggcctgcgc gacgatggcg tgctccggtg
      901 acaggtgaca aaccggatcg gtggcgcgcg catcgcccgt aagcatgaaa gcttggcagc
      961 ggcatccgcc gaagtcctgc tcgcgccggg gacaggattt gcagggctcc cgcatccagt
     1021 ccgtgccgcg gaatgccagg aacgcgggcg aggcgcgcca gatatcggca agcgaatgct
     1081 cgcgcacatt ccagaattca aggccaggaa taacttcagc ggcgtgacag ggaagcaccc
     1141 gacctgccgg agtaacgttg agcgagcggc ggccccagcc gccgacgcat ggcttgggaa
     1201 agcgtgcata gtagtccggc accaccgcat cgatgacaat ctgtccacga tgcctgtcgc
     1261 gcagcatctc caccgtgcgc acggcctcct ccacctgctc gcgcgtgggc atcagggccg
     1321 cacgattctt catgccccag ccgtagtact gcacgtgcgc gatttccacg cggctggcgc
     1381 caagagacag cgccaattcc accatcgttt cgatgcggcc gatattggcg cgatgcacca
     1441 ccatgttgat ggtgagcggc agccccagac ggacaacctc cttggccagt gcgcgcttgc
     1501 ggacggaggc gcctttgtag ccggcaatgt ggtcggccga tgactcgtcg ctgtcctgaa
     1561 tcgaaatctg cacatggtcg agcccggcat cagcgagcga cgcgagcgtt tgcggcgtca
     1621 agccaacagc cgacgtaatg agattgctgt aaagagaggc ctcgcgggcg gccttgacga
     1681 tgtcgggcag atcgcggcgc gctgccggct ccccgccgga gagatgcacc tgcagcacgc
     1741 cgagcgcggc cgcttcgcgg aatacacggg cccaggtcgc ggtgtcgagt tcgtcggcac
     1801 gcttgtcgag cgcaagtgga ttcgagcagt acgggcagcc gagcggacag cgatgagtaa
     1861 gctcggcaag caggccgagg ggcgtgggca cactgagacc gttcgtcgtc acggcatgct
     1921 cgttgcccgt tcattcccgc gcaagcggga atccagatgg gtccccgttt tcatggggac
     1981 gaacggtcga aaaaaatgct gcacacaact caacccaact ccaacaattt cttctccgcc
     2041 aggccgccca gcagcttaac gacatcggca tgaatgcgct cgcgcggggc ggcgaatgtc
     2101 ctggcgagat cgtccacgat cgcatggagt gt
//
LOCUS       DATDHO010000852         2480 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_192606, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000852 DATDHO010000000
VERSION     DATDHO010000852.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2480)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192606"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..842)
                     /locus_tag="VIY07_16730"
     CDS             complement(<1..842)
                     /locus_tag="VIY07_16730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6383435.1"
                     /translation="MSLKGKTLFITGGSRGIGLAIGLKAAADGANIAIAAKTVEPHPK
                     LEGTIHTAAAEIAKAGGRALPLAVDVRDDAAVQAALDEVAAKFGGIDIVVNNASAIQL
                     TPTTATDMRRYDLMQQINARGSFMVSKFAIPYLMRAANPHILMLSPPLDMAEKWFAPH
                     TAYSMAKFGMSLVVLGLAGELRGKIAVNALWPRTTIATSAIRNLLVGDAMMLRSRKPA
                     ILAEAACRIFQKPKTFTGNFLIDDTFLAGEGVTDFDQYRADPSQPLQVDFFVPDDATM
                     PKGV"
     gene            complement(864..>2480)
                     /locus_tag="VIY07_16735"
     CDS             complement(864..>2480)
                     /locus_tag="VIY07_16735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HEY6383436.1"
                     /translation="DSILAEAGRYASDVIAPLNSVGDKFGTPFKDGKVTTPPGWKDAY
                     TAWAAAGWNGLAAPADWGGQGLPHAVNAACIEMWNSASMAFGIGPVLTMAAIDALHAY
                     GSDALKKEYLAKLISGEWMGTMQLTEPQAGSDVGALRSKAERASDGTYRITGSKIFIT
                     YGEHDLTDNIIHFVLARLPDTPAGTKGISLFLVPKVMPDGARNDVRAHSIEHKLGIHA
                     SPTCTMVYGDRGGAVGYLIGEENNGMACMFTMMNRARLAVGLQGVGIAERATQQALAY
                     ARERKQGPAGAIIAYPDVKRMLLTMRALTTAARAICYATAIAIDRSLRAKTDAARKSA
                     HERASLLTPVAKAFSTDIGTEVASLGIQVHGGMGYVEETGASQHYRDARIAAIYEGTN
                     GIQALDLVTRKVPLEGGNTVELYIEELRRTVTSIRSSDAPGFGQAAARLGDAVDSLER
                     ATRWLIAQKSSDAALAGATPYLRLFGSAAGGCMLAEDALASLRAGDGAGRAALARFFA
                     ENIAIQASSLERTVTESADSINGAQAALAE"
BASE COUNT          428 a          770 c          775 g          507 t
ORIGIN      
        1 ctcacgccct tcggcatcgt cgcgtcgtcg ggcacgaaga aatccacctg cagcggctgg
       61 ctcgggtcgg cgcgatactg atcgaaatcg gtgacgcctt cgccggcgag gaatgtgtcg
      121 tcgatcagga agttccccgt aaaagtcttg ggcttttgga aaattcgaca ggcggcctcg
      181 gcgaggatag cgggcttgcg cgagcgcagc atcatcgcgt ctccgacgag caggttcctg
      241 atcgccgagg tggcgatcgt tgtgcgcggc cacaaagcat tgactgcgat tttcccgcgc
      301 aattcgcctg cgagccccag aaccacgaga ctcatgccga acttcgccat cgaatacgcg
      361 gtatgtggtg cgaaccactt ttccgccata tcgaggggag gggacaacat gagtatgtgc
      421 gggttcgccg cacgcatgag atatggaatg gcaaatttgg agaccatgaa actgccgcgc
      481 gcgttgatct gttgcatcag gtcgtagcgc cgcatgtcgg ttgcagtggt cggcgtgagc
      541 tggattgcgc ttgcgttgtt caccacgata tcgatgccgc cgaatttggc cgcaacctcg
      601 tcgagcgcgg cttgaacggc cgcatcgtcg cgaacatcga cagccagtgg cagcgctcgt
      661 ccgccggcct tggctatttc ggctgcagcg gtatgtatcg tgccttcaag ctttggatgc
      721 ggctcgacag tctttgcggc gatggcgatg ttggcgccat ccgccgcggc tttcagcccg
      781 atcgcgaggc cgattccacg tgagccaccg gtgatgaaga gagtctttcc cttcagtgac
      841 atctgactga ttgctcctcg tcgttactct gcgagcgctg cctgcgcgcc attgatgctg
      901 tctgcgcttt cggtgacggt acgctccagg ctgcttgcct ggatcgcgat attctcggcg
      961 aaaaaccgcg ccagcgcggc acgcccggcg ccgtcgccgg cacgaagcga agccagcgca
     1021 tcctcggcca gcatgcagcc ccccgcggcg ctgccaaaga gccgcaggta gggcgtcgcg
     1081 ccggctagcg cggcatcgga ggatttctgc gcaatcaacc accgcgtcgc gcgttcaaga
     1141 ctgtccaccg catcaccaag ccgggccgcc gcctggccga agcccggtgc gtcgctcgat
     1201 cgaattgatg tcaccgtacg ccgcagctcc tcgatataga gctcgacggt attgccccct
     1261 tcgagcggca cttttcgcgt caccaggtcg agggcctgga ttccgttggt gccttcgtaa
     1321 atcgccgcaa tacgggcgtc cctatagtgt tgcgatgcgc cagtttcctc gacgtacccc
     1381 atgccgccgt gcacctggat gccgagcgaa gcgacttccg tgccgatatc ggttgaaaaa
     1441 gccttggcga cgggtgtgag cagcgaagcg cgctcgtgtg cgcttttgcg cgcggcatcc
     1501 gtcttagccc gcaacgagcg gtcgatggcg atcgcagttg cataacagat tgcacgcgct
     1561 gcggtggtca gcgcgcgcat cgtgagcaac attcgtttca catccgggta ggcgatgatt
     1621 gcgccggccg gaccttgctt gcgctcccgc gcataggcca gagcttgctg tgtcgcgcgc
     1681 tcggcaatcc cgaccccctg caagccgaca gcaagccgcg cccgattcat catggtgaac
     1741 atgcacgcca tgccgttgtt ctcttcaccg atgaggtagc cgacggcacc accgcgatcg
     1801 ccatacacca tggtacaggt cggcgaggca tggatgccca gcttgtgctc gatcgaatgc
     1861 gcgcgcacgt cgttgcgcgc accgtctggc atgactttcg gtaccaggaa cagggagatg
     1921 cctttggtgc ccgcgggagt gtcaggcagg cgggcgagaa cgaaatgaat gatgttgtcg
     1981 gtcaggtcgt gctcaccata ggtgatgaag atttttgatc ccgtaatgcg gtaggtgccg
     2041 tcgcttgcgc gctcggcctt gctgcgcagg gccccgacat ccgatccggc ttgcggctcg
     2101 gtgagctgca tggtgcccat ccattcgccg ctgatgagct ttgcgagata ttcttttttc
     2161 aatgcgtcgc tgccgtaggc atgcaacgca tcgatggcgg ccatcgtcag caccggcccg
     2221 atgccgaagg ccattgatgc cgaattccac atctcgatgc aggcggcgtt gacggcatgc
     2281 ggcagcccct ggccgcccca atctgccggc gccgcgagcc cgttccagcc cgctgcggcc
     2341 catgcagtgt aggcgtcttt ccaaccgggc ggcgtggtga ccttgccgtc cttgaaaggg
     2401 gtgccgaact tgtcgccaac actgttgagg ggtgcaatta catcgcttgc gtagcggccg
     2461 gcctctgcca ggatggaatc
//
LOCUS       DATDHO010000853         8978 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_41013, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000853 DATDHO010000000
VERSION     DATDHO010000853.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8978)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8978)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8978
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_41013"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..716)
                     /locus_tag="VIY07_16740"
                     /pseudo
     CDS             complement(1..716)
                     /locus_tag="VIY07_16740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609143.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
     gene            complement(739..1530)
                     /locus_tag="VIY07_16745"
     CDS             complement(739..1530)
                     /locus_tag="VIY07_16745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MotA/TolQ/ExbB proton channel family protein"
                     /protein_id="HEY6383437.1"
                     /translation="MDIATGLGLLAGAVVLCTLILMGGDLRMFLDVHAAIVIFGGSFA
                     ATLIRFPLSSIFHGLPLGAKFAFSLRRMSQRDLVDELAGLAEVARKQGPIGLEKVEIE
                     DPFLAKGVRFVADGYDGNFIRDNLERDRDNFLTHLDEGQKIYRAVGDCAPAFGMIGTL
                     IGMVQMFANMTDPSKLGPFMAVALLATFYGAAVANLLCLPIADKLHLKLVDEEINRTL
                     IIDGILMIREGKSPTLVREMLLAYLPEKHRHNEEDIDGAAEAVPA"
     gene            1770..3266
                     /locus_tag="VIY07_16750"
     CDS             1770..3266
                     /locus_tag="VIY07_16750"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEY6383438.1"
                     /translation="MREIGHFIGGKVVKGTSGRFGDVFDPNTGEVQARVALAKHSEVE
                     HAIANAQAAQPGWATTNPQRRARVMFKFLELVQKEFDSLAKLLSSEHGKTIPDARGDI
                     QRGIEVVEFACGVPHLLKGEFTEGAGPGIDLYSLRQPLGVVAGITPFNFPAMIPMWKF
                     APAIACGNAFILKPSERDPSVPIRLAELMIDAGLPAGVLNVVNGDKEAVDTLLTDPRV
                     MAIGFVGSSAIAEYIYSTGCAHGKRVQCFGGAKNHMIVMPDADINQAVDALVGAGYGS
                     AGERCMAVSVAVPVGKKTADILVEKLIPRVESLKIGPSSDPQADYGPMVTRAHLNKVK
                     DYVDLGVKEGAKLVVDGRGFKLQGYENGNFMGGCLFDEVKPDMRIYKEEIFGPVLSVV
                     RAKDYEEAVRLPSEHEYGNGVAIFTRDGDAARDFVNRVQVGMVGVNFAIPVPLAYHTF
                     GGWKRSGFGDLNQHGPDSIRFYTKTKTVTSRWPTGTKEGAEFVIPTMK"
     gene            3336..3983
                     /locus_tag="VIY07_16755"
     CDS             3336..3983
                     /locus_tag="VIY07_16755"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008549823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HEY6383439.1"
                     /translation="MSEYQLYCFAQSGNAYRAALMLNLIGADWEPLWVDFFGAMVQRT
                     PKFRAEINEMGEAPVLVHGARKLTQSGVILTYLAKRSGKFKPEGEDEELEALRWMIFD
                     NQKVNGFLGPFRFLKNFAKPPGDSAVLAFLKGRIDGNLAIVNKRLTGRQFLISDKPTI
                     ADVSMTGYLYYPAEEFGFDIGEDHPAIGSWLERMKALPGWKHPYDLMPGYPLETK"
     gene            complement(3984..4880)
                     /gene="pssA"
                     /locus_tag="VIY07_16760"
     CDS             complement(3984..4880)
                     /gene="pssA"
                     /locus_tag="VIY07_16760"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEY6383440.1"
                     /translation="MVFQPFDPAPPPFRRRFKAIPVRTLLPNLITLLALCAGLTAIRL
                     AVEDKLELALAAIVFAALLDGIDGRIARMLKGTSKFGAELDSLADFVNFGVAPALILY
                     LWGLHDLKSAGWIAALVFAICAGLRLARFNVMIDDPNRPAWAGNFFTGIPAPAGAITV
                     LLPIYVTFLGVPVGLVTVWFTFFYTLLIALLMVSRLPVFSGKRVGKRVPPEMVLPVFV
                     MVVLFFALLVSYPWQVLTLGTLTYLACLPLGWLSYREHQRKDAAAAAATVTATAPTPA
                     DEAFPSGEPDQKSDKERPARLN"
     gene            complement(4954..5652)
                     /locus_tag="VIY07_16765"
     CDS             complement(4954..5652)
                     /locus_tag="VIY07_16765"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEY6383441.1"
                     /translation="MSIYDSIRSQVVPISPEGYPFIGAFALVSLILFWLWSPLGWLGT
                     LATIWCAYFFRDPPRVTPVREGLVVAPADGRISQVTSAIPPNDLDLGSRPLPRISIFM
                     SVFDCHVNRSPAAGKIEKVVYHPGKFFNADLDKASVDNERNCLVIATPGDRVAVIQIA
                     GLVARRIICFVRPGQSIGAGERFGMIRFGSRLDVYLPEGTTPLVATGQNSIAGETVLA
                     DLLSGDAGRAFRSG"
     gene            complement(5662..7638)
                     /locus_tag="VIY07_16770"
     CDS             complement(5662..7638)
                     /locus_tag="VIY07_16770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEY6383442.1"
                     /translation="MTDHHHRISESESRVSANRGALLTTLIHLWPYIWPSDRTDLKFR
                     VIGSLVLLLAAKLATIAVPFTFKWATDALTGQGTAPVAASDWLLWAIAAPVAMTIAYG
                     GMRVLMAALTQLRDGLFAKVAMHAVRRLAYRTFVHMHELSLRFHLERKTGGLTRVLER
                     GRNGIETIVRMVILQLSPTIIELAFIVVVLMWQFDWRYVAVITITVAVYMTYTYRATE
                     WRIGIRRKMNDSDTEANVKAIDSLLNYETVKYFSAEEREAARYDRAMARYEDASVRAY
                     TSLAVLNAGQAVIFTFGLAATMVMCAFEIKAGTKTVGDFVLINAMMIQLYQPLNFMGM
                     VYREIKQAVTDIEIMFSILAREPEIKDLPQALPLKVSTGTVRFENVSFAYDPSRPILK
                     GISFEVPAGSTVAVVGPSGAGKSTISRVLFRFYDISGGRILIDDQDIAKVTQKSLRQA
                     IGMVPQDTVLFNDTIRYNIRYGRWEATDAEVEEAARLAQIDPLIRIAPKGYDTEVGER
                     GLKLSGGEKQRVAIARTILKGPPILVLDEATSALDSHTEKEIQDALERVSRNRTTLVI
                     AHRLSTIVGADEIIVLDQGEVVERGTHYALLAKDGLYASMWNRQREAEEAREKLARAG
                     EDEKSAPNRNPPPVEDEISEAAAAPLAARADAAE"
     gene            7741..8364
                     /locus_tag="VIY07_16775"
     CDS             7741..8364
                     /locus_tag="VIY07_16775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEY6383443.1"
                     /translation="MNRPQKSSKIRKICVYCGSGPGADPAFVDSAKAFGAILAKNDIG
                     LIFGGGSIGMMGAIAKSVLDHGGKVTGIIPEFLVAREHAIRGADNLIVTRDMHERKRK
                     MFELADAFVALPGGIGTLEEVVEQMTWVQLGRHRKPILLANIKHFWDPLCSLIDHMRT
                     LEFIRAGLNFDLLVADNVGDILPLLQKAAEAIPEEEKEMPAVIADRL"
     gene            complement(8392..8772)
                     /locus_tag="VIY07_16780"
     CDS             complement(8392..8772)
                     /locus_tag="VIY07_16780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6383444.1"
                     /translation="MIDHVSVAVGDLAQATRFYETVLATIGIVKIESRPATAGFGKIY
                     PEFWINLRADLPAVPPESGAHVCFRARSPELVDAFHAAALAAGGSSDGEPGYRPSHGD
                     GYYAAFIRDPDGNRIEAVTFVGAK"
     gene            complement(8769..>8978)
                     /locus_tag="VIY07_16785"
     CDS             complement(8769..>8978)
                     /locus_tag="VIY07_16785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-isopropylmalate synthase regulatory
                     domain-containing protein"
                     /protein_id="HEY6383445.1"
                     /translation="YIAGLKLTDYRVRILNGGTEAVTRVLIESEDERGERWTTVGVSA
                     NIIDASFQALMDSIVFKLLKSEAPA"
BASE COUNT         2002 a         2589 c         2595 g         1792 t
ORIGIN      
        1 ccttgcccgc caccatgaaa atattgcctg acgggatgcc ttccgactcc agaatttgac
       61 gtacggcatt agcgcgatcg gccgatagtt cccagggacc atagccaggc tttggcgcca
      121 ctttagtaga tgcggtgtga ccaacgatgg aaagacgata aggcatggcc ttgagctggg
      181 gtgcgatttt ctgaagcaac tttcgcgtgc gctcgtaagg ttccttgccg ccttcgggaa
      241 acatggaacg gccgtcttgg tcgacaatct cgatgttgag accctgcttc gtctcctcga
      301 gcatgatgtg cttcgacgct tcggcgattt ccggcatttc ctgcaaggct tgccggagtg
      361 aggcagaggc cagcgaaaac ttgcgatcct ctttgagccg ggccccatag gaacgctggc
      421 ggtcgctctc ttcgggtgac ggcgttgccg aagcttcaga tgggtcgata tgagcggcat
      481 tcctgagttt cggccgtgtc ggcaatccga gcacctcgat aaccggaata ccgcacccgg
      541 tcctgaacgc caaaagcatc gcgcatggag cccgcaacga cctgcagctt ggcctgatcc
      601 tgcgtggaga acgcaaccaa catcacgaag aagctgacaa gcagccccat cagatcggca
      661 aaggtgacaa accagccgtg tcctccgccg tgacctgctt ctttacgtct cgccatgaga
      721 gccttcaatt ctaccgctct aggcgggcac ggcctccgcc gctccgtcga tatcttcttc
      781 gttgtggcga tgcttctcag gcaggtaggc aagcagcatc tcgcgcacca gggtcggact
      841 ctttccttcc cggatcatca ggattccatc gatgatcaga gtccgattga tttcttcatc
      901 caccagcttg agatgaagtt tgtctgcgat cggcaggcaa agcaggttgg caactgcggc
      961 gccgtaaaag gtcgccagca aggcgacagc catgaagggg cccagtttcg acggatcggt
     1021 catgttggcg aacatctgca ccattccgat caaggtcccg atcatgccga aagccggcgc
     1081 gcaatctcct accgcgcggt aaatcttttg cccttcgtcc agatgtgtca gaaaattgtc
     1141 gcggtcgcgt tcgagattgt cccgaatgaa attgccgtcg tagccatccg cgacgaaacg
     1201 aacgcccttg gcaagaaacg gatcctctat ttcgaccttt tcgagaccga tgggtccctg
     1261 cttccgcgca acctctgcca ggccagccag ttcgtcgacc agatcgcgtt gactcattcg
     1321 gcgaagcgaa aaggcaaatt tggcgccaag cggcaagccg tggaagatcg aagaaagcgg
     1381 aaatcgtata agtgtggcag cgaaggagcc gccaaaaatc acgattgccg catggacatc
     1441 gagaaacatc cgcaaatcgc cgcccatgag tatgagcgtg cagaggacga cagcccccgc
     1501 cagcaggcct agacctgttg cgatatccat acccgcaccc cacccacgcg tacgacttga
     1561 cgtctcgttc gagcgacgcc taaagcgacc ctagactggc gctgttaaag gtgggtaaag
     1621 gctaaccgtt ggtgaaagaa aaaaggtccg caaatcgccg ccaactggtg accggcggtc
     1681 gaaaaactgc gagaatcgcg acaaaacggc gccaaatgcc cgagacgggc tttccggagc
     1741 cttttaaaaa aaagggagga atgcgtccca tgcgtgaaat cggccatttc attggtggca
     1801 aggtcgtcaa ggggacatcc ggtcgtttcg gcgacgtctt cgatcccaat actggcgaag
     1861 tccaggccag ggtcgcgctc gccaagcact ccgaggtcga gcacgccatc gcgaacgctc
     1921 aggcagctca gcccggatgg gcaacgacca atccacaacg tcgcgcccgc gtcatgttca
     1981 agtttcttga gctggttcaa aaggagttcg acagcctggc gaaactactg tcgtcggaac
     2041 atggaaagac gatcccggac gcccgcggcg acatccagcg tggcattgaa gtcgtggaat
     2101 tcgcgtgcgg cgttccgcat ttattgaaag gcgaattcac cgaaggcgcc ggacccggaa
     2161 tcgatttgta ctcccttcgg caaccgctcg gggttgttgc tggcatcaca cctttcaatt
     2221 ttccggcaat gattccgatg tggaaattcg cgccggcaat cgcatgcggc aatgccttca
     2281 tccttaaacc atccgaacgc gatccgtccg ttccaataag actggccgaa ctgatgatcg
     2341 acgcaggact tcctgccgga gtactcaacg tggtcaacgg tgacaaggaa gcagtggata
     2401 cgctgctgac cgatccgcgc gtaatggcga tcggcttcgt cggctcgtcg gcgattgcgg
     2461 agtacatata ttcgaccggg tgcgcccacg gcaaacgcgt tcaatgcttt ggcggtgcga
     2521 agaatcatat gattgtgatg cccgatgccg atatcaatca ggctgtcgat gctctggttg
     2581 gcgccggcta tgggtctgcc ggcgagcgct gcatggcggt ctcggtcgca gtccccgtcg
     2641 gtaaaaagac tgctgacatt cttgtcgaaa aactgattcc gcgcgtcgaa agcctcaaga
     2701 ttggtccttc gagcgacccg caagcggatt atggaccgat ggtcacgagg gcgcatttga
     2761 acaaggtgaa ggattatgtc gacttgggtg tgaaagaagg cgccaagctt gtcgtcgatg
     2821 gtcgcggctt caaattgcag gggtacgaaa acggaaactt catgggtggt tgcctgttcg
     2881 acgaggtcaa gccggacatg cgcatctaca aagaggaaat cttcgggcct gtcctctcgg
     2941 tggtacgcgc gaaggactac gaagaagccg tgcgtctgcc ttccgaacac gaatatggaa
     3001 acggagtcgc gatcttcacg cgcgacggcg acgccgcccg cgatttcgtt aaccgcgtgc
     3061 aggtagggat ggtaggcgta aacttcgcta ttccggtccc tctcgcctac cacacgtttg
     3121 gcggctggaa gcggtctggt ttcggcgatc tcaaccagca tggaccggat tcgatccgtt
     3181 tttatacaaa gacgaaaacc gtaacctctc gctggcctac cggcacaaag gaaggcgccg
     3241 agtttgtaat cccaacgatg aaatagttct atcggggact gctgagggca acgagcggcc
     3301 ctttgccgga gatcgtccac cgaaccggag ccttcatgtc cgaatatcag ctttattgtt
     3361 tcgcccaatc cggcaatgcg tatcgcgccg cactgatgct caatctgatt ggcgccgatt
     3421 gggagccact ctgggtcgac tttttcggcg caatggttca acgcacgccg aaatttcgtg
     3481 ctgaaatcaa tgaaatggga gaagcgccgg tccttgtgca cggtgcaaga aagctcacgc
     3541 agtccggcgt gatcctgacc tacctcgcca aacgtagtgg aaaattcaag ccagagggcg
     3601 aggacgaaga acttgaggcg ctgcgctgga tgatcttcga taatcagaag gtgaatggct
     3661 tcctcggccc gtttcggttt ctgaagaatt tcgccaagcc cccgggtgac tcggctgtgc
     3721 tggcatttct caagggacgc atcgacggaa atttggcgat cgtcaacaag cgactcacag
     3781 gccgccaatt tctgatcagt gacaagccga cgatcgccga cgtatcaatg actggctatc
     3841 tttattaccc tgctgaggag ttcggctttg acatcggcga ggatcatccg gcgatcggca
     3901 gctggctcga gcgcatgaag gcgcttcccg gatggaagca cccttacgat ttaatgcccg
     3961 gttatccgct tgaaacgaag tgatcagttg aggcgcgctg gccgctcttt atctgatttc
     4021 tggtcgggct cgccggacgg aaatgcctca tcggcggggg ttggcgcggt cgcagtcacc
     4081 gtggccgcag cggcggctgc gtccttacgt tggtgctcgc gataggaaag ccatccgagc
     4141 ggcaggcacg ccaggtaggt taacgtgccc agcgtgagca cctgccatgg atagctgacc
     4201 agcaacgcga agaacaagac gaccataaca aacaccggca gcaccatttc gggaggcacc
     4261 cgcttgccga cgcgctttcc cgaaaaaact ggcaaccggg acaccatcag caacgcgatc
     4321 agcagcgtgt agaagaaggt gaaccacacc gtgacaagac caaccggaac accgagaaac
     4381 gtgacgtaga tcgggagcaa cacggtgatg gcaccagccg gagccggaat gccggtaaag
     4441 aaatttcctg cccatgccgg cctgttgggg tcgtcgatca tcacgttgaa gcgcgcgagt
     4501 ctcaggccgg cgcaaatcgc aaaaaccaat gcggcaatcc agcccgccga tttgaggtca
     4561 tgcaaacccc acaagtaaag gatcagcgcg ggcgccacgc cgaagttcac gaaatctgcc
     4621 agactgtcga gctcggcacc aaatttcgaa gtgcctttga gcatccgcgc gatccgacca
     4681 tcgatgccat cgagcaaggc agcaaacaca atcgccgcca gcgccagttc gagcttgtcc
     4741 tccaccgcca gccgaatagc agtgaggcct gcacacagcg ccagcaaagt gatcagattg
     4801 ggcaacaggg tccggaccgg aatcgccttg aagcgacgcc ggaatggcgg cggagcggga
     4861 tcaaacggtt gaaagaccat gacccaaata taggcccgag ttgccgggcg cgccacagcg
     4921 cggaaatggc tttctgtcgg cctcgttaac gatctacccg ctgcggaatg ccctgcccgc
     4981 gtcacccgag agcagatcgg caaggacggt ttccccggca attgagttct ggcccgttgc
     5041 caccagcggg gtcgtgccct cgggcaaata gacatcgagt cgcgacccaa atcggatcat
     5101 gccaaagcgc tcgccggctc caatggactg accggggcgc acgaaacaga tgatgcggcg
     5161 cgcgacaagg cctgctatct gtatcaccgc aactcggtcg ccgggagttg caatcaccag
     5221 gcagttgcgt tcgttatcga cgctcgcttt gtcgagatcg gcattgaaga acttgccggg
     5281 atggtagacg accttctcga tttttccggc agccgggctg cgattgacgt ggcagtcgaa
     5341 tacgctcatg aaaatcgaaa tgcggggaag cggcctgctc ccgaggtcca gatcgtttgg
     5401 cggaatcgca ctggtaactt gactgatacg tccatctgcc ggcgcgacga ccaggccctc
     5461 tcgcaccggc gtgacccgcg gcggatcacg gaagaaatag gcgcaccaga tcgtcgccag
     5521 cgtgccaagc cacccgagtg gactccaaag ccagaacaga atgaggctga ccagcgcgaa
     5581 agccccgata aacgggtacc cctccgggct tatcggcacg acctgtgagc ggatcgaatc
     5641 gtagatcgac atgcggctat cctactctgc cgcgtccgcg cgtgctgcga gcggagcggc
     5701 agctgcctcg ctgatctcat cttcaaccgg gggaggattg cgattgggcg cgctcttttc
     5761 gtcttcgccg gcccgcgcaa gcttctcgcg cgcctcttcg gcttcacgct gacgattcca
     5821 catgcttgca tatagcccat ccttggcaag caaggcatag tgagtcccgc gttcgacgac
     5881 ctcaccctgg tcaagcacga taatctcatc ggccccgacg atcgtggaaa gtcgatgcgc
     5941 aatcaccagc gtggttcggt tgcgcgaaac gcgctcaagc gcatcctgaa tttctttctc
     6001 ggtgtgacta tcgagggcgg aggtcgcctc gtcgagcacc aggatgggag ggcctttgag
     6061 gatcgtacgg gcgatggcta cgcgctgctt ctcgccaccg gacaatttga gcccccgctc
     6121 gcccacctcg gtgtcgtaac cctttggcgc aatgcggatg agcgggtcga tctgggcaag
     6181 gcgcgccgcc tcttcgactt cggcgtccgt cgcttcccag cggccgtaac ggatgttgta
     6241 gcggatggta tcgttgaaga gaacggtatc ctgcggcacc attccaatcg cttgccgcaa
     6301 cgatttctgc gtgacctttg cgatgtcctg gtcatcgatc agaatgcggc cgcccgaaat
     6361 atcgtaaaag cgaaatagca cgcgcgaaat cgtcgacttt cccgcgccgg aaggtcccac
     6421 gacggctact gtgctgccgg ccggaacctc gaagcttatg cctttgagga tgggacgaga
     6481 cggatcgtaa gcgaagctga cgttctcgaa ccgaacggtg ccggtactga ctttcagcgg
     6541 gagcgcctgc ggcaggtcct tgatctcggg ctcgcgcgcc agaatcgaga acatgatctc
     6601 gatatcggtg acggcctgct tgatctcgcg atagaccatg cccatgaaat tcagaggctg
     6661 gtaaagctgt atcatcattg cgttgataag gacgaaatcg ccgacggtct tggtgccagc
     6721 cttgatctcg aaggcgcaca tgaccatggt tgcggcaagt ccaaacgtga agatcaccgc
     6781 ctgacccgcg ttgagaaccg ccaacgacgt atacgctcga acgctggcat cttcgtatcg
     6841 ggccatcgcg cggtcgtaac gggccgcttc acgttcctcg gccgagaaat atttgacggt
     6901 ctcgtagttc agcagcgagt cgatcgcctt aacgttggcc tcggtgtcgc tgtcattcat
     6961 cttgcgccgt atgccgatgc gccattcggt ggcgcgatag gtgtaggtca tgtagaccgc
     7021 aacagtgatc gtgatcaccg cgacatagcg ccagtcgaac tgccacatca gcaccacgac
     7081 gatgaatgcg agctcaatga tcgtcggcga cagctgcaga atcaccatgc ggacaatggt
     7141 ttcgattccg ttgcgtccac gctcaagaac gcgcgtcaaa ccgccggtct tgcgctcgag
     7201 atggaaacgc agcgacagtt cgtgcatgtg cacgaaagtg cgataagcga ggcgccgcac
     7261 tgcgtgcatt gccactttgg cgaacagccc gtcccgcaac tgcgtgagcg ccgccatcag
     7321 gacgcgcatc cccccatagg cgatcgtcat ggcgacgggc gcggctattg cccaaagaag
     7381 ccaatcggaa gcagcgaccg gggcagtgcc ctggccggta agcgcatctg tcgcccattt
     7441 aaacgtgaaa ggaactgcaa tcgtcgcaag ttttgcagcg agcaacagca ccagtgaccc
     7501 gatcacccga aatttcaggt cagttcgatc ggacggccag atgtagggcc aaagatgaat
     7561 aagcgtcgtc agtaaagcgc cgcgattcgc ggagacgcgt gattcgcttt cggaaatccg
     7621 gtgatgatgg tccgtcattc aagcttcata tatgcggatt ctggccggta atcaccattt
     7681 ccgccgactt attgctcggc tgccttgacg atgccgcaag cgctatgcac atgcatatct
     7741 atgaacagac ctcaaaaaag cagcaaaatc agaaaaattt gcgtctattg cggctccggt
     7801 ccgggtgcgg atccggcttt cgtcgatagc gcaaaggcat ttggcgcgat cctggcgaag
     7861 aacgatatcg gcctgatatt cggcggcggg tccatcggca tgatgggagc aatcgccaag
     7921 tcggttctcg accatggcgg caaggtaacg ggcatcattc cagaatttct ggtcgcacgt
     7981 gaacacgcta tccggggggc ggacaatctg attgtcaccc gggatatgca tgaaagaaag
     8041 cgcaagatgt ttgaactggc tgatgccttt gtagcgttgc cgggcggaat cgggacgctt
     8101 gaagaagttg tcgaacaaat gacctgggtt cagctcggac gccatcgcaa gccgatcctg
     8161 cttgcgaata tcaagcattt ttgggatcca ctctgctccc ttatcgacca catgaggacg
     8221 cttgagttca tccgcgccgg cctcaacttt gatctgcttg tggccgataa cgtcggtgac
     8281 attctgccac tgttgcaaaa agcagccgag gcgattccgg aggaagaaaa agaaatgccc
     8341 gccgtgattg ccgatcggtt gtgatacgga ctccgataca gcgacgtctt actatttggc
     8401 gccgacgaat gtcaccgctt caatgcggtt tccatccggg tcgcgaatga aagcggcgta
     8461 atagccatcc ccatgcgaag ggcgatagcc gggttccccg tcgcttgagc cgccagcggc
     8521 aagcgcagcc gcatggaacg catcgacaag ctcgggcgat cgcgcgcgga agcaaacatg
     8581 cgcaccgctt tccggtggca ccgcggggag atcggcgcgc aaattgatcc agaattccgg
     8641 atagattttg ccgaagcccg cggttgcagg ccgagactct attttgacga ttccgatcgt
     8701 agcgagcacc gtttcataaa agcgtgtcgc ttgcgcaaga tcccctaccg cgactgaaac
     8761 gtgatcgatc acgcgggtgc ttcggatttc agcagcttaa agacaatgga atccatcaat
     8821 gcctggaaag aggcatcgat gatattcgcc gacacgccga ccgtcgtcca acgctcgccg
     8881 cgctcgtcct cgctttcgat cagcacgcgc gtcaccgcct cagtgccgcc gttgaggata
     8941 cgcacgcgat agtcggtcaa tttcagcccg gcgatata
//
LOCUS       DATDHO010000854         1862 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_142162, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000854 DATDHO010000000
VERSION     DATDHO010000854.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1862
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142162"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..392
                     /locus_tag="VIY07_16790"
     CDS             <1..392
                     /locus_tag="VIY07_16790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383446.1"
                     /translation="MEPWWADLPEAPYVAGWQRFLTDTGFAPHLWEQPVYNDTYQYKG
                     RYDVLGTVSNHEALIDIKTTVQMAPSLGYQLAGYDLCLPPNPKRIRWGVQLKKDGGYQ
                     LHEYGNRNDHKIFLAASTVAQTKGLVK"
     gene            401..1063
                     /locus_tag="VIY07_16795"
     CDS             401..1063
                     /locus_tag="VIY07_16795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383447.1"
                     /translation="MDNLETQVTSVPARAVALQIQTATDYLAAGELLSAIKGLRAEID
                     RSFDPIIAKAFAAHREAIAQKKKVEAPLAEAEAILKPRIAAYLEAEEQKRQLEELRLQ
                     RLAQEAEEQRQLEMAAMLEEAGETEEANRMLEEPVVAAPVIVQRTVPQVQGVVMQKRW
                     NAEVVSLMELVRAVAAGKAPLQCLQADSVFLNRQAVAMRNALNYPGVRAVSQSIVAGR
                     RG"
     gene            1060..1377
                     /locus_tag="VIY07_16800"
     CDS             1060..1377
                     /locus_tag="VIY07_16800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383448.1"
                     /translation="MIARWAGRCSICDEGVRAGEDIHYDAEAKSVQHWDCFENPQPTA
                     AEIAAAERCGYAAAAAIDSDEWPAIYRDWHLLPLPPSSGSPAARRPETPARPRRQSTL
                     FGA"
     gene            1380..1589
                     /locus_tag="VIY07_16805"
     CDS             1380..1589
                     /locus_tag="VIY07_16805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383449.1"
                     /translation="MPFPKTEDELKAQGYRFKDKARCRGCNAVILWYETPNSKLMPLD
                     PETLEPHWGSCPERDRFKKPKPERT"
     gene            1622..>1862
                     /locus_tag="VIY07_16810"
     CDS             1622..>1862
                     /locus_tag="VIY07_16810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383450.1"
                     /translation="MDDAALDLLQQAALDYAAIRDQRQKLTARETELKQTLLTLMREQ
                     KRITYSFDGVDVERVVEQETVKVRVRKLAEEETDEA"
BASE COUNT          414 a          559 c          601 g          288 t
ORIGIN      
        1 gtatggagcc gtggtgggca gatctgccgg aagcgcctta cgtcgccggc tggcagcggt
       61 tcctcaccga caccggcttt gcgccgcact tgtgggagca gccggtctat aacgacacct
      121 atcaatacaa gggccgctac gacgtgctgg gcacggtctc gaatcacgag gcgctcatcg
      181 atatcaagac cacggtgcag atggcgccct cgctcggcta tcagctggcg ggctacgact
      241 tgtgcctccc gcccaacccg aagcggatcc gctggggggt gcagttgaaa aaggatggcg
      301 gttatcaact gcacgaatac gggaaccgga acgatcacaa aatatttctc gcggcctcga
      361 cggtcgccca aacgaaagga ctcgtgaaat gagcactgtc atggacaacc ttgaaaccca
      421 ggtgacctcg gtcccggcgc gggccgtcgc gctccagatc cagaccgcaa ccgactacct
      481 tgcggccggc gaactactgt ccgccatcaa gggcctgcgc gcggagatcg atcgatcgtt
      541 cgatccgatc attgcgaaag cgttcgccgc ccaccgggaa gccatcgccc agaagaagaa
      601 agtcgaggcg ccgctggcgg aagcggaggc gatcctgaag ccgcgcatag ccgcctacct
      661 cgaagcggag gagcagaagc ggcaactgga agaactgcgg ctgcagcgcc tggcgcagga
      721 agccgaagaa cagcggcagt tggagatggc ggcgatgctg gaggaagccg gagagacgga
      781 ggaagccaat cggatgctgg aagagccggt cgtggccgcg cccgtgatcg tgcagcgcac
      841 cgtgccgcag gtccaaggcg tcgtgatgca gaaacggtgg aatgcggaag tggtcagcct
      901 catggagctc gtgcgcgcgg tcgcggccgg caaggcgcca ttgcagtgtc tgcaagcgga
      961 ctccgtcttt ttaaacagac aggcggtggc gatgcgcaac gcgctcaatt atcccggagt
     1021 gcgcgcggtg agccagagta ttgtggcggg acggcgcgga tgatcgcccg ctgggccggc
     1081 cgctgctcga tctgcgacga aggcgtgcgc gccggcgagg atatccatta tgacgccgaa
     1141 gccaagagcg tccagcattg ggactgtttc gaaaaccccc agcccacggc cgcggagatt
     1201 gccgccgccg agcgctgcgg atacgccgcc gcggccgcca tcgattccga tgagtggcct
     1261 gcaatatatc gagactggca tctgctacct ttgcctccgt ccagtggaag ccctgcagcc
     1321 aggcggcctg aaaccccggc acgtccacga cggcagtcca ctttgtttgg agcgtgaaca
     1381 tgcccttccc taaaaccgaa gacgaactga aagcccaggg ctaccgcttc aaagacaaag
     1441 cccgctgccg gggctgcaac gcggtcattc tctggtacga gacgccgaac agtaaactga
     1501 tgccgctcga tccggaaacc ttggagccgc actggggaag ctgccctgag cgggatcgct
     1561 tcaagaaacc gaaacctgag aggacctgac attcatgtct caaccccaac gcctccccgg
     1621 catggacgat gccgccttgg atctgctgca acaggccgca ctcgactatg cggcgatccg
     1681 agatcaacgc cagaaactga ctgcaagaga aaccgagttg aagcaaacgc tgctgaccct
     1741 gatgcgggaa cagaaacgca tcacctacag ctttgatggc gtcgacgtcg agcgggtggt
     1801 ggagcaggaa accgtgaagg tgcgggtgcg gaaattggcg gaagaggaga cagacgaggc
     1861 gc
//
LOCUS       DATDHO010000855         1706 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_142180, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000855 DATDHO010000000
VERSION     DATDHO010000855.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142180"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..740
                     /locus_tag="VIY07_16815"
     CDS             <1..740
                     /locus_tag="VIY07_16815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6383451.1"
                     /translation="GDSSLPHSMVEGGSWTAASTAHAIAVTADEIRKELLGLAQKMPA
                     SPLAGLQNEDVVLADGMIAAKQDSGRTVSVAEAMRHGAVDRIEHEKSAEFKEDDKHAR
                     NTHSAIFVEVKVDEQLGVIRVTRVVNAVAAGRIINTKTAASQIMGSVVWGIGMALHEE
                     TLVDHKFGRVMNANIAEYHVPVNADVQDIKVVFVDEPDNVVNPLGIKGVGEIGIVGVA
                     AAVANAVYHATGKRVRDLPITIDKLLR"
     gene            complement(765..>1706)
                     /locus_tag="VIY07_16820"
     CDS             complement(765..>1706)
                     /locus_tag="VIY07_16820"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEY6383452.1"
                     /translation="HWILRLGEMALTFQEKLRARRFVITAEVTPPVSVDPGELLAKAL
                     PLKGLADAINVTDGAGARPHLGAVTAATILVEQGIEPILQLTCRDRNRIALQSDLLSA
                     AASRIRNLLMLRGDDPSAGDQPDAMPVFDLDPRSLLETARQLRDSGELPTGRKVGGRI
                     DFFLGSADNPIDPQPGWRPTGLQAKIAAGAQFAQTQFCMDAGVARRYMARLAETGVTD
                     RLSVLIGIVPLRSAKSARWIKEKLFGSVVPDALIQRMERASDPLAEGRRICIEMVSEL
                     ADVAHVSGVHIMAPGNEASVPEVIKAARESIKRLAPA"
BASE COUNT          351 a          524 c          524 g          307 t
ORIGIN      
        1 tgggcgattc gtcacttccg cattcgatgg tcgagggcgg ttcatggacg gcggcgtcga
       61 cagcacacgc catcgcggtc acggccgacg aaattcgcaa ggagctcctc ggtcttgcgc
      121 agaaaatgcc cgcctcgccg ctcgccgggc tgcagaacga ggatgtcgtt cttgcagatg
      181 gcatgatcgc cgcaaagcag gattcaggcc gtacggtatc tgtcgcagag gcgatgcggc
      241 acggagccgt cgatcgcatc gagcatgaaa aatctgccga attcaaggaa gacgacaagc
      301 atgcacgcaa cacgcactcg gcaattttcg tcgaagtaaa ggtggatgag cagcttggcg
      361 tcatcagggt gacccgcgtc gtgaacgcgg tcgctgccgg acgcatcatc aataccaaaa
      421 cagccgcaag tcagatcatg ggcagcgttg tgtggggcat cggcatggct cttcacgaag
      481 aaacgctggt cgatcacaaa ttcggtcgcg tcatgaatgc caacatcgcc gaataccacg
      541 tgccggtgaa cgctgacgtg caggacatca aggtcgtgtt cgtcgacgaa cccgacaacg
      601 tcgtcaaccc gctgggaatc aagggtgtgg gagagattgg aattgtcggg gtcgcggcgg
      661 ctgtcgccaa tgccgtgtat cacgcaaccg gcaagcgcgt tcgtgacctg ccgatcacga
      721 tcgacaaact gcttcggtaa ggataacccg tcggcggagg tcgatcacgc cggtgcgagc
      781 cgtttgatgc tttctcgcgc cgccttgata acttcaggca cggaagcctc gttgccgggc
      841 gccatgatgt gcacgccgga aacgtgagcc acgtccgcca attcgctcac catctcaatg
      901 cagatccggc gaccttcggc gagcggatcg ctcgcccgct ccattcgctg aatgagcgcg
      961 tcgggaacca ccgagccaaa aagcttttcc ttgatccagc gcgccgactt ggcggagcgc
     1021 aacggcacaa tcccgatcag gacggacagt ctgtcggtca cgccggtctc ggccagccga
     1081 gccatgtagc gccgtgccac accggcatcc atgcaaaatt gcgtctgcgc aaattgtgcg
     1141 ccggcggcga tcttggcttg cagcccggtg ggacgccacc cgggttgggg gtcgattgga
     1201 ttgtccgcac tgccaagaaa aaaatcgatg cggccgccca ccttgcgccc ggtcggcagc
     1261 tccccgctgt cgcgcagctg tcgcgcagtc tccagcagcg accgcggatc gaggtcgaat
     1321 accggcatcg catcgggctg atccccggcg ctcgggtcat ccccgcgcag catcagcaaa
     1381 ttgcgtatgc gtgaggcggc agcgctcaac aagtcgctct gcaaggcaat acggtttcga
     1441 tcacggcagg tgagctgaag gatgggctcg atcccctgct cgaccagtat tgtcgcggct
     1501 gtgacggcgc caagatgagg ccgcgccccg gcgccatcgg tcacgttgat cgcatcggca
     1561 aggcccttca atggcagcgc cttggccaac agctcgcccg ggtcgacgga aaccggcggc
     1621 gtcacctctg ctgtgatgac aaagcgcctg gcgcgtaatt tttcctgaaa cgtaagggcc
     1681 atctctccaa gtcgcaaaat ccagtg
//
LOCUS       DATDHO010000856         2198 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_239888, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000856 DATDHO010000000
VERSION     DATDHO010000856.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2198)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2198)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2198
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_239888"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            241..900
                     /locus_tag="VIY07_16825"
     CDS             241..900
                     /locus_tag="VIY07_16825"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY6383453.1"
                     /translation="MSKPRISYIDPSTIKDPAMIAEFERCAREGTPRPESQAVRAHVP
                     ATFWSFANTWRDVFKNGIADHKIKELCRIYVSRSVLCEFCGNQRSIKAAKAGLKEDDY
                     SDLINFESSTRYDERQKAALAYAEAITWDLPATDELWDRLHKHFSEPELVEIGYFVAI
                     TMGQQRWLRTLNIEHHQILAGTDASMAPGFETADALKRSKEAEDYWARINGKPSKQAA
                     E"
     gene            897..1727
                     /locus_tag="VIY07_16830"
     CDS             897..1727
                     /locus_tag="VIY07_16830"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383454.1"
                     /translation="MTDQATAASAAPAAQGSKTEPRIRVRGLAKRFGALEVFRNIEFD
                     VGEREIVAIVGPSGCGKTTLLRCIDGLLPHDAGEIRVGAERVTKPIAGVAMVFQHFGL
                     FPWKTVFENVAYGLRMAGTPKPEIERKVPEFIKLVGLTGFEDAFPYQMSGGMQQRCGL
                     ARALAVEPNVLLMDEPFAAVDAQTREILQFELLHIWAQRPTAMIFVTHSIEEAVLLGH
                     RVIVLNGRPSSIHETIVIDLAQPRTRETLREPRFGELRERVWDTLMREAREAQFHLGR
                     "
     gene            1860..>2198
                     /locus_tag="VIY07_16835"
     CDS             1860..>2198
                     /locus_tag="VIY07_16835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6383455.1"
                     /translation="MSSDPLLKAAIAHWGPRFVANGVVLTDFEELTGSLSSYNDWCSA
                     WSARAAHHEQLGREALKKKHLLTAGECLQRAGIYYHFASFLFVHDQAQMRAAHKKQIE
                     CRQAALAHLRP"
BASE COUNT          462 a          645 c          664 g          427 t
ORIGIN      
        1 ggcaacgatc gattcagttt tctgaaccgc gccgcctttg aaaacgccag caaatacgga
       61 ggctcttgct gacgtgatca gcccagtcag ctcgcctggg gaaacaatcc gggccaagca
      121 cggttagcaa attacggcgt caccgttgcc cctaccgcat cattgcggca acatgcgcgc
      181 ccggtggtca acgaagacgc ccgaagcgtg cgacgaatat tttccgggag aatgctgcag
      241 atgtccaaac cccgcatcag ttacatcgac ccctcgacga tcaaggatcc ggccatgatc
      301 gccgaattcg aacgttgcgc gcgcgagggc acgccgcggc cggaaagcca ggccgttcgg
      361 gcccatgtgc cggcaacgtt ctggtcgttc gccaatacat ggcgagatgt attcaagaat
      421 ggcatcgccg accacaagat caaggagctt tgccgcattt acgtctcgcg ttcggtgctg
      481 tgcgaattct gcggcaatca gcgctcaatc aaggcggcga aagcgggcct caaggaagac
      541 gactattccg acctgatcaa tttcgagagt tcgacgcgct acgacgaacg gcaaaaagca
      601 gcgttggcat atgccgaggc catcacctgg gatctgcctg ccaccgatga attgtgggat
      661 cgcctgcaca agcatttcag cgaacctgag ctcgtcgaga tcggttattt cgtcgctatt
      721 accatgggtc agcagcgctg gctgcgcacg ctcaacatag agcatcacca aattctcgcc
      781 ggcacggacg cttcgatggc gccaggcttc gagacggcgg acgcgctcaa gcgttcaaaa
      841 gaggccgagg attactgggc cagaataaat ggaaagcctt caaagcaggc tgccgagtga
      901 ccgatcaagc aacggcggcg tctgctgctc cggctgcgca gggcagcaaa actgaaccac
      961 gcattcgcgt ccgcggcttg gcaaagcgct tcggcgcgct cgaagtattc cgcaacatcg
     1021 aatttgacgt gggcgagcgt gagatagtcg caatcgtcgg cccgtcgggg tgcggcaaga
     1081 ccacgctctt gcgttgcatt gacggcctgt tgccgcacga tgccggcgag attcgcgtag
     1141 gcgccgagcg tgtcaccaag cccatcgccg gcgtcgcgat ggtattccag catttcggcc
     1201 tcttcccttg gaagacggtg ttcgaaaacg tcgcctatgg tttgcgcatg gccggcacgc
     1261 cgaagccgga gatcgagcgc aaggtgccgg aattcatcaa gctggtgggt cttaccggat
     1321 ttgaggatgc attcccgtac cagatgtccg gcgggatgca gcagcggtgc gggcttgctc
     1381 gggctctcgc cgtcgagccc aacgtcctgt tgatggacga gccgtttgcg gcggtcgacg
     1441 cgcaaacgcg cgagattctg caattcgaac tgttgcacat ctgggcccag cggccgacgg
     1501 ccatgatctt cgtcacgcac tcgatcgaag aagcggtgct gctcggccat cgggtcatcg
     1561 ttcttaatgg acggccctcg agcattcacg agaccatcgt cattgatttg gcgcagccac
     1621 ggacgcgcga aacactgcgc gagccgcgct tcggtgaact gcgcgagcgg gtgtgggaca
     1681 cgctgatgcg cgaagcacgc gaagcccaat tccatctcgg acgttgagca agagaaaacg
     1741 tgctactcgc cgcctttggt ggcgctcgaa tatgattccg ttcattcccg cgtaagcggg
     1801 aatgaacgga tagctaccgc ttggtgccgt tgcttcgttt aagcaaaaag gaattccgta
     1861 tgtcatccga cccgctgctc aaggctgcga tcgcgcattg ggggcctcgc tttgttgcca
     1921 acggcgtggt gttgaccgac ttcgaggaac ttaccggctc gctttcctcg tacaacgact
     1981 ggtgcagtgc ctggtcggcg cgtgccgcgc accacgagca gctcggacgc gaagcgctga
     2041 agaaaaagca tctgctgact gccggagaat gcctgcagcg cgcggggatt tattaccatt
     2101 tcgcgtcgtt tctgttcgtc cacgaccagg cgcagatgag agctgcgcac aagaagcaga
     2161 tcgaatgtcg ccaggcggcg ctcgcacatt tgaggcca
//
LOCUS       DATDHO010000857         1644 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_89252, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000857 DATDHO010000000
VERSION     DATDHO010000857.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89252"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..804
                     /locus_tag="VIY07_16840"
     CDS             124..804
                     /locus_tag="VIY07_16840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383456.1"
                     /translation="MATYRRRLHALLTPAEHRVFTRLDAPHKVQNFLDRLPVNFSLDG
                     DTAMSPRRVLEARMAHCAEGAIFAAAALAYHGKPPLLMDIRALPSDQDHIITLFQERG
                     LWGAISKTNHAILRWRDPIYLSVRELAMTYAHEYCLPGGKKSMLSFSKPFSLARYAPR
                     TWVIAPEDLDWLLVDLDTSPHLPVAPRHALRKRRRSSRVELLSQQVLEWPDPRKKKRK
                     VNSRKARR"
     gene            1096..1524
                     /locus_tag="VIY07_16845"
     CDS             1096..1524
                     /locus_tag="VIY07_16845"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY6383457.1"
                     /translation="MASFIYRRKLTIEWGQCDPAGIVFNSRFFEIFDASTWQMFEAAL
                     GVKPHELANAFGIIGIPLVDAGANFLRPIKFGDVVDMTSRVSEFRRSSFDVEHRLSVD
                     GELAVEGSETRVWASRSKDNPEKIGGTAIPGDVIARFGPA"
BASE COUNT          315 a          502 c          503 g          324 t
ORIGIN      
        1 ctaatgagtg aaagaatttc ctttggtcca aaccttgtgg agaacgccgc tagcgctcga
       61 atcccgtcaa aacgtatgca aaacaccgca agtgaggctg actcccgaat cttccgctga
      121 ttgatggcaa cctatcgacg caggctgcat gcgttgctga ccccggcgga gcatcgggtg
      181 ttcacgcggc tggacgcgcc tcacaaggtc cagaactttc tcgacaggct gccggtgaat
      241 ttcagtctgg atggcgacac cgcgatgtcg ccgcgccggg ttctcgaggc gcgcatggcg
      301 cattgcgccg agggcgcgat cttcgccgcg gccgcgcttg cctatcacgg caagcctcct
      361 ttgctgatgg atatccgcgc gctgccgagc gaccaagacc acattattac tcttttccag
      421 gagcgtgggc tgtggggcgc gatcagcaag acgaaccacg ccatcctgcg ctggcgcgat
      481 ccgatttatt tgagcgtgcg cgaactggcg atgacctatg cgcacgagta ttgcctgccc
      541 ggcggcaaga aatcgatgct gtctttttcg aagccgtttt cgctcgcgcg ctacgcgccg
      601 cgaacctggg tgatcgcgcc ggaagatctc gactggctgc tggtcgatct tgacacctca
      661 ccgcatcttc cggtcgcgcc gcggcatgcg ctgcgcaagc gccgccgctc ctcgcgtgtc
      721 gaattattgt cgcaacaggt gttggagtgg cccgatccgc gaaagaagaa gcggaaggtg
      781 aactcgcgta aggctcggcg ataatagagg cgtcgattac cacacactcc gttcatcccc
      841 gcgcacgcgg ggatccaggg cggcacatga ggttctttat agaagctggg tccccgcttt
      901 cgcggggacg aacggtgaga tcgcctacca cattctccgt tcattcccgc gcaagcggga
      961 atccatcctg ggtccccgct tgcgcgggga cgaacggtga aatgcaatcc gcgtactgca
     1021 ttgccgttga atgcttgctt cgccgtttac gccgaccccg cccatcttta taagcagcgc
     1081 aggcggaggc aacgcgtggc gtctttcatc tatcgccgga aactgaccat cgagtggggc
     1141 caatgcgatc cggccgggat cgtgttcaac agccgtttct tcgagatctt cgacgcgagc
     1201 acctggcaga tgttcgaggc ggcgctcggg gtcaagccgc acgagctggc gaacgcgttc
     1261 ggcattatcg gaattccgct ggtcgacgcc ggcgccaatt tcctccggcc gatcaagttc
     1321 ggcgacgttg tagacatgac ctcgcgcgtc agcgaattcc ggcgctcgag cttcgacgtc
     1381 gagcatcgcc tctcggttga tggcgaactg gcagtcgagg gcagcgaaac ccgggtctgg
     1441 gcgtcgcgca gcaaggataa tccggaaaag atcggcggga ccgccatccc aggcgacgtg
     1501 atcgccagat tcggtccggc gtaaccgttc cagtcattcc cggaaattgg ctttgagaag
     1561 cccttcgggc cggccggccc cggggctaat attgctgcaa cgacaacaac taagcgcgca
     1621 aagcggcgcg cttgagggga cgaa
//
LOCUS       DATDHO010000858         1743 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_89271, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000858 DATDHO010000000
VERSION     DATDHO010000858.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89271"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1173)
                     /gene="rfaE1"
                     /locus_tag="VIY07_16850"
     CDS             complement(<1..1173)
                     /gene="rfaE1"
                     /locus_tag="VIY07_16850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase"
                     /protein_id="HEY6383458.1"
                     /translation="MYDFDKHLAELSDQTVLCIGDLMLDEFIYGEVSRISPEAPTPVI
                     AVKRTELLIGGAGNVARNLVALGTRCIFVGAVGDDEAGNELTKALGNHPLIEFHLVVD
                     GSRQTTRKVRFVSEHHSTHLLRADWETASAVDARSEDALIGHVIKAIPRAGAVVLSDY
                     AKGALTPRVIRAVIDAANDRGKPIVVDPKGRDYSIYRGATVITPNRQELADATHSVAR
                     TDDEIADAAAKLCEALAAKAVLVTRSEAGMTLVNNGASVHVPAYPVRVRDVSGAGDTV
                     VAVVSAMLAMGADFESAMRAANAAGAVVVGKRGTATASVAELRSRILPSATLAPKEKI
                     VFDWAVLDEHLVEWRKQGLRVGFTNGCFDLLHPGHVKLLAGARAACDRLVVGLNGDD"
     gene            complement(1178..>1743)
                     /locus_tag="VIY07_16855"
     CDS             complement(1178..>1743)
                     /locus_tag="VIY07_16855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HEY6383459.1"
                     /translation="LYGWSKHLFDLAVVDRYMKKEKMPPHWVGLKFFNVYGPNEYHKA
                     HMASVLAKVFDTARAGSPVRLFKSHREGIADGDQRRDFIYVDDAVSVLRWLVEATGIN
                     GIFNVGTGRAESFRDMIAAMFKALRLPLNIEYIEMPETIRGQYQYFTEARIERLQRAG
                     YNAGFMPLEAAVNQYVTGYLNRDDRYR"
BASE COUNT          352 a          543 c          498 g          350 t
ORIGIN      
        1 atcgtccccg ttgaggccca caacgagacg atcgcaggcg gcacgcgcgc cggccagaag
       61 cttgacatgg cctgggtgaa gcagatcgaa gcagccgttg gtaaagccca cgcgcagccc
      121 ttgcttgcgc cactcgacaa gatgctcgtc aaggacagcc cagtcgaaga caatcttttc
      181 tttcggcgcc agcgtcgctg acggaagtat gcgagaccgc agttcggcaa cagatgccgt
      241 tgcggtcccg cgcttgccga ccacgacggc accagccgca ttggcggccc gcatcgcgga
      301 ttcgaaatcc gcacccatag ccagcatcgc ggaaacaacc gcgacaacgg tatcgcccgc
      361 accggaaacg tcgcgtacgc ggactggata cgcaggaacg tgcacggatg ctccattgtt
      421 tacgagggtc ataccggcct cgctgcgcgt caccaggacc gcctttgcgg ccaatgcctc
      481 gcatagcttt gcagcagcat ccgcaatctc atcgtcggtc cgggcgacgc tatgcgtggc
      541 atcggcgagt tcttgcctgt ttggcgttat aacggtcgcg ccgcgataga tgctgtagtc
      601 gcggcccttg ggatccacca cgatgggctt gcctcgatcg ttggcagcat caatgaccgc
      661 ccggatcacg cgcggcgtga gcgcgccttt ggcatagtca gacagcacca cggcgcctgc
      721 ccgcgggatt gccttgatga cgtgtccgat cagtgcatct tcgctgcggg catcgaccgc
      781 tgaagccgtt tcccaatcgg ctcggaggag atgcgtcgaa tggtgctccg atacaaaacg
      841 caccttgcgc gtggtttgac ggcttccatc gacgacgaga tgaaactcga tcagcggatg
      901 gttgccgagt gccttggtca actcgttgcc tgcttcgtcg tcgccgacgg ctcccacgaa
      961 tatgcaacga gtgccgaggg ctaccagatt gcgagcgacg ttgccggcac ccccgatcag
     1021 caattccgtg cgtttgaccg cgatgaccgg cgtcggcgcc tccggcgaaa tccgcgagac
     1081 ctcgccatag ataaattcat ccagcatcag atcgccgatg cagagcacgg tctgatcgga
     1141 aagctcggca agatgcttgt cgaaatcgta catcgcgtta ccgatagcga tcgtcgcggt
     1201 tgagataacc cgtgacgtac tggttcaccg ccgcctcgag cggcatgaag ccggcgttat
     1261 aacccgcacg ttgcagccgt tcgatgcgcg cctcggtgaa atactgatat tgcccccgga
     1321 ttgtctccgg catctcgatg tattcgatat tcaggggaag ccgaagcgct ttgaacatcg
     1381 cagcgatcat gtcacggaag ctttccgccc tgccggtacc cacattgaag atgccgttta
     1441 ttcctgttgc ctcgaccagc cagcgcagca cggaaacggc gtcatcgaca taaatgaaat
     1501 ctcgtcgctg atcgccgtcg gcaatgccct cgcggtgcga tttgaacaag cgcacgggac
     1561 ttcctgctct ggccgtatcg aacactttcg ccaggacgct tgccatgtga gccttatggt
     1621 actcgttcgg accatacacg ttgaagaact tcagcccgac ccaatgcggt ggcatctttt
     1681 ctttcttcat ataccggtcg accacggcga ggtcgaacag atgcttgctc cagccgtaga
     1741 gat
//
LOCUS       DATDHO010000859         1607 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_483948, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000859 DATDHO010000000
VERSION     DATDHO010000859.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_483948"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            134..1096
                     /locus_tag="VIY07_16860"
     CDS             134..1096
                     /locus_tag="VIY07_16860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6383460.1"
                     /translation="MRTFLRLAAFACAVLLSWPVVAQNYPNRPVKFVVPFGAGGPADV
                     FARVLAQHLSEDTKQSFIVENRPGAGSVIGTDAVAKSAPDGYTLLVMSNTHTTNESLL
                     PNKPFQLMRDFVPIATINYSDLLMVVHPSVPAKTVQEFIDLAKKDPGKLNYASSGPGT
                     PYHMAGELFKAMSQTDIVHVPHKASGDARNSVVSGTVQMMFDAVTTMSELAKAGQVRA
                     LGTTGLKRSELTPDLRTIAEVVPGYEATIWLGVMAPKGTPKEIVNFLNAGINKVINRP
                     DVREAWLKQGAIPLVKTPDEFEAFLLKDIEKWANVVKVSGAKIQ"
     gene            1128..>1607
                     /locus_tag="VIY07_16865"
     CDS             1128..>1607
                     /locus_tag="VIY07_16865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383461.1"
                     /translation="MVDGLLSSSFVLPASVAGALAAFFLVMVVVAVRQAGLSRLLLLL
                     ALVVLGALAVIGLLDRFSTSERLGEQRALLQRDSQLSMSAVASGSPLACLEGLAGEQV
                     ENACEQAVFADAQSTARAVAFVTARLSLLADVFASARGDENFLAAFATGRRAIELDRY
                     "
BASE COUNT          305 a          465 c          481 g          356 t
ORIGIN      
        1 aagccaaggg ggcctttgcc gcggcgggtg accttgcgcc aagtttcaag tcagcgggag
       61 gaacgtgagg ctactaagga ataaagacga gaaccgcgac cttgtagtcg gctagaacaa
      121 aatgggagga tttatgcgca catttctgcg tttggctgca ttcgcttgtg ccgttttgct
      181 gagttggccg gttgtggccc agaattatcc aaaccgcccg gtcaaattcg ttgtcccttt
      241 tggggccggc gggcccgccg acgtctttgc ccgggtgctt gcccaacatc tctccgagga
      301 caccaagcaa tcgttcatcg ttgagaaccg tcctggcgcc ggttcggtca tcggcactga
      361 tgctgtcgca aaatctgcgc ccgatggcta cacgctgctg gtcatgtcga atacgcacac
      421 gaccaacgaa tccttgctgc cgaacaaacc gtttcagttg atgcgcgact tcgttcccat
      481 cgccaccatc aactattccg acctgctgat ggtcgttcat ccgtccgttc cggcaaagac
      541 cgtccaggaa ttcatcgatc tcgcaaagaa ggaccctggc aaacttaatt atgcttcttc
      601 aggtcctggg acgccctacc acatggctgg tgaactgttc aaagcgatga gccagaccga
      661 cattgtccac gtgccgcaca aggcttctgg cgatgcgcgc aacagcgtcg tctccggcac
      721 cgttcagatg atgtttgacg ccgtgaccac catgtcggag ctggcaaagg ccgggcaggt
      781 ccgcgcgctc ggcacgaccg gcctcaagcg ttcggaactt actcccgatc tgcgcaccat
      841 cgccgaggtc gtacccggat atgaggcaac gatctggctc ggcgttatgg ccccgaaggg
      901 cacgcccaag gaaatcgtca actttttgaa cgccggcatt aataaagtca tcaacaggcc
      961 cgatgtaagg gaagcttggc tcaagcaggg cgcgatcccg cttgtgaaga cgccggatga
     1021 gttcgaagct ttcctgctca aggacatcga aaaatgggca aatgtggtaa aagtctcagg
     1081 agccaagatc caatagtcgc gagttcacgc caaccctcga gagcgcagtg gtagacgggc
     1141 tgctttcgtc atcgttcgtg ctgccagcgt ctgtggccgg cgcgctggcg gcgttttttc
     1201 ttgtgatggt ggttgtggcg gttcggcagg cgggtctttc gcgtctactg ctcctgctgg
     1261 ctctggtcgt gctcggcgcg ctcgcggtta ttggccttct tgaccgtttt tcgaccagcg
     1321 agcggcttgg cgagcagcgc gcgcttctcc aacgggattc gcagctcagc atgagcgctg
     1381 ttgcgtcagg gtcgcctctg gcctgcctgg aaggtctggc cggcgagcag gtggaaaatg
     1441 cctgcgagca agcggtgttc gcggatgcgc aaagcaccgc gagggccgtt gccttcgtca
     1501 ccgcgcggct gtcattgctt gcggatgttt ttgcaagcgc gcgcggcgac gagaatttcc
     1561 tggctgcgtt tgccaccgga cgccgtgcca ttgagctcga tcgttac
//
LOCUS       DATDHO010000860         2440 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_142311, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000860 DATDHO010000000
VERSION     DATDHO010000860.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_142311"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            225..1271
                     /locus_tag="VIY07_16870"
     CDS             225..1271
                     /locus_tag="VIY07_16870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysylphosphatidylglycerol synthase
                     domain-containing protein"
                     /protein_id="HEY6383462.1"
                     /translation="MFKWLRAGARFFQKTIGWNRIGVLLSVAIISVAAVVLYNMLHDI
                     DVDEVIAALKATEPHHIAAAAFFVACGYFTLTFYDLFALRTIGRDEVPYRIAALTGFT
                     SYSIGHNVGATVFTGGAVRYRIYSSYGLDAIEVAKICFIAGLTFWLGNATVLGLGVAY
                     HPEAAVPIDQLPVWLNRLIGIAMLAVLVCYVIWVWSATREIGQGEWKVRLPSGPSTLL
                     QIFIGILDLGFCSLAMYMLLPGEPNIDFVTIAVVFVSATLLGFASHAPGGLGVFDAAM
                     LVALWQFDKESVLAGLLLFRLLYYLAPFAIALVILGMREIWLNLRGARPAEPKLIKTV
                     TAPIRTEIGAEKTD"
     gene            1274..>2440
                     /locus_tag="VIY07_16875"
     CDS             1274..>2440
                     /locus_tag="VIY07_16875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6383463.1"
                     /translation="MALDQYRREFQPANGLAARLRGAWQALVGNSAAVAEPDLARAVE
                     LMLTGPQALLVDQLIRGLPGAAIVLDREGRVIAFNEAAITIAPALSRGELALIALRMP
                     ELVDAVRRAAKRRERQRVEFFERVPLDRWLEAFVTPVRIASGGEGTVDLLLMTFNDLT
                     PLRRVEEMRADFVANASHELRTPLAALLGFIETLQGTAKDDATARFKFLGIMQAQATR
                     MARLIDDLLSLSRIELNAHLQPNTPVDLVPIVRQVVDGLQTLARDRGVEINVAVPADE
                     LTVLGDRDELIRALENLVENALKYGAGGKRVDITASRGQTRASGSEARIAVRDYGPGI
                     PPEHLPRLTERFYRVDVADSRAQGGTGLGLALVKHVLNRHAGRLTIESTLGEGAA"
BASE COUNT          425 a          691 c          792 g          532 t
ORIGIN      
        1 ggcagggtgt ctgatttgct gtcggattcg ctcatgacac ttcgctgacg gtcgttgtta
       61 tgaaacgtta aggtcggggg ccttatttcc gacattgtag cagattgcca aatggcggct
      121 ctactcgccc gccggggcta gttctgctag gggtcgggca caaggcgcgt tttcctgacg
      181 cgcggcgtcc acggccacat ggccggcgcc aaaccggagg aatgatgttt aagtggttgc
      241 gcgcaggggc gcgttttttc cagaagacga tcggttggaa tcggatcggc gtgctgctga
      301 gcgtggccat catcagcgtg gcggctgtcg tgctctacaa catgctacac gacatcgacg
      361 tcgatgaagt tattgcagca ctgaaggcga ccgagcctca tcacatagcg gccgcagcat
      421 ttttcgtggc ttgcggctat ttcacgctga cgttctatga cctgttcgcc ttgcgaacta
      481 ttggccgcga cgaggtccct tatcgtattg cagcgctcac cggcttcacc agttattcga
      541 tcggccacaa tgtcggcgcg acggtcttca ccggcggcgc cgtgcgttac cggatctatt
      601 cgagttatgg actcgatgcg atcgaagtgg cgaagatatg ttttatcgcg gggctgacct
      661 tctggctcgg caatgccact gtgcttggcc ttggcgtggc ctatcatccg gaagctgcgg
      721 tgccgatcga tcagctgccg gtgtggctca accggctgat tggcatcgcg atgctcgcgg
      781 tgttggtgtg ttatgtcatc tgggtgtgga gcgcgacacg cgagatcggg caaggcgaat
      841 ggaaagttcg cttgccaagc ggaccgtcca cgctgctcca gatcttcatc gggattctcg
      901 atctcggttt ctgttcgctc gccatgtaca tgttgttgcc gggcgagccg aatatcgatt
      961 ttgtaaccat tgcggtggtc ttcgtatcgg cgacgctact cggattcgcc agtcacgcgc
     1021 cgggaggcct tggcgtcttc gatgcggcca tgctcgtggc gctgtggcag tttgacaagg
     1081 aatccgtgct ggcaggcctg ctcctgtttc gattgctcta ttatctcgcg ccgttcgcaa
     1141 tcgctttggt tatactgggc atgcgggaga tatggctgaa tttgcgcggt gcccgtccgg
     1201 ctgaaccgaa gctgatcaag accgtgacgg cgccgatccg caccgagatc ggggccgaaa
     1261 agaccgactg accatggcgc tagatcaata ccgtcgcgaa tttcagcctg ccaatggcct
     1321 ggcggctcga ctgcgcggcg cgtggcaagc acttgtgggc aactctgccg ccgttgccga
     1381 gccggatctt gcccgtgcgg tggaactgat gcttacaggt ccgcaagccc tgttggtcga
     1441 tcagctcatc cgaggcctgc ctggcgcagc gatcgtgctc gaccgcgagg gccgcgtgat
     1501 cgcgtttaac gaggcagcga taacgattgc accggccttg agccgcggcg aacttgcgtt
     1561 gatcgctttg cgcatgccgg agcttgtcga cgccgtgcga cgggcagcga agcgccggga
     1621 acggcagcgc gtcgaattct tcgaacgcgt gccgctcgat cgttggctcg aggctttcgt
     1681 cactcccgtc aggatcgcaa gcggcggtga aggcaccgtc gatctcctgc tgatgacgtt
     1741 caatgatctc actccgctgc ggcgggtcga ggagatgcga gcagactttg ttgccaatgc
     1801 cagccatgag ctgcgcacgc cgctcgcggc gttgcttggc ttcattgaaa cattgcaggg
     1861 taccgccaag gatgacgcga cggcgcgctt taaatttctg ggcatcatgc aagcccaggc
     1921 gacccggatg gcccgtctga tcgacgatct gttgtcgctg tcgcgaattg agctcaacgc
     1981 gcacttacag ccgaatacac cggtcgattt ggtgcccatc gtccggcagg tggtcgacgg
     2041 tctgcaaacg cttgcgcgcg atcgaggcgt cgaaatcaat gtggcggtgc cggcggatga
     2101 actgacggtg ctaggtgacc gcgacgagct gatccgcgcg ctggaaaatc tggtcgagaa
     2161 cgcactcaag tacggtgcgg gtggcaagcg ggtcgacatt acggcgagcc gcgggcagac
     2221 gagggcgagc ggttccgaag cccgcatcgc ggttcgtgac tacggtccag gcattccccc
     2281 ggaacatttg ccacgcctta cagagcgctt ttaccgcgtg gacgtggccg acagccgagc
     2341 gcagggcggc acagggctgg ggttggcact ggtcaagcat gtgctcaacc gacatgccgg
     2401 gcgcctgaca atcgagagca cgctgggcga gggggctgct
//
LOCUS       DATDHO010000861         6745 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_89357, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000861 DATDHO010000000
VERSION     DATDHO010000861.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6745
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_89357"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1034
                     /locus_tag="VIY07_16880"
     CDS             <1..1034
                     /locus_tag="VIY07_16880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEY6383464.1"
                     /translation="HIHGSSLIEMSLGVAIGAVTFTGSVIAFLKLSARMSGKPILLPG
                     RHIINLALAAALIFFIYGFFVSQSQLDFWLITGISLLLGVLIIIPIGGADMPVVISML
                     NSYSGWAAAGIGFTLGNTALIITGALVGSSGAILSYIMCKGMNRSFISVILGGFGGET
                     AGPGGGAEQRPVKLGSAEDAAYIMKNASKIIIVPGYGMAVAQAQHALREMADKLKKEG
                     VEVKYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINSEFAQADVAFVIGANDVTN
                     PAAEEDKTSPIYGMPVLQVWKAGTVMFIKRSLASGYAGIDNPLFYRDNTMMLLGDAKK
                     MTESIVKAM"
     gene            1214..2422
                     /locus_tag="VIY07_16885"
     CDS             1214..2422
                     /locus_tag="VIY07_16885"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEY6383465.1"
                     /translation="MTDDREQQDCEIIQFGRRPVPPRACVVENRIHVRMFLADMLDEM
                     GFIACEADTTDIRATLRDFRPDVIILGPLDAGLEVQAVLRSLQAQAYGGAVMLFGGRS
                     SGALISNHQFGDQAGLMMLPPLGTPFRARDLDANLDRFLPVQPPPPLPLDVDEALCNG
                     WLELWYQSKIDAQSLVPRGADALVRVRHPIWGVVAPAYYIPAADDPYLHALSRFVIAR
                     ALADSVQFAGANNPVRISIPLPLLALEDLQFIDRMLEKLPEKARLNGLLIAVDCVDLV
                     NDYALVRHIGSQLALRNIGMALNDVDAQGAALAGRRDLPVVEMKVSRKFIQGCADDRI
                     KQARCAEIVAIARESGARSVAEGVDRHSDFLAARDLGFDLLQGNMFAKPMAPRKFECA
                     MLARHYAAVA"
     gene            complement(2459..3343)
                     /locus_tag="VIY07_16890"
     CDS             complement(2459..3343)
                     /locus_tag="VIY07_16890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HEY6383466.1"
                     /translation="MAYSNILVGAGSHPAQPVVRKIGLSDLRDALAKGADDFYAMPTH
                     AMFLCIIYPIVGFVLARLAFGYSVLPLLYPLATGFALVGPVAALGLYELSRRREAGLD
                     TSAARAFDIFESSSIGAIAALGFLLLIIFVIWVAVANAIYIANFGYASPSSVEEFIKD
                     VLTTRPGWNLIIVGNLVGLLFAILVLSISAVSFPLLLDRDVGAAVALLTSIRVVARNP
                     FTMMVWGLIVAALLLIGSLPLFFGLTVVMPLLGHATWHLYRKVVEPASALPPTLPEAR
                     KERRYAADFPTVLFPWSK"
     gene            complement(3474..4592)
                     /locus_tag="VIY07_16895"
     CDS             complement(3474..4592)
                     /locus_tag="VIY07_16895"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
                     /protein_id="HEY6383467.1"
                     /translation="MDQKIGFLESELDRAVATFGQATAGDNVVPIDGARSHATVRERE
                     RRFRELLDALPAAVYTTDAAGRITYYNEAAAALWGHRPLLGSSEWCGSWKLYWPDGTP
                     LPHDLCPMAIALKADRVVRGMEAAAERPDGTRVPFIPYPTPIHDEAGRLIGAVNMLVD
                     ITDRKRAEEQKTLLVRELHHRVKNTLAMVQAIAGSTARAVDNIEDFKTALFGRIQSLA
                     KTHLLLADDDRAVKFEDILRSELDAFDDGSHERIVLSGPEVALNSQVAVSLGMAIHEL
                     TANAAKYGALSVYGGKVEVTWSVTIDAARRTLMFDWVESSGPAVTPPKREGFGSRLLA
                     FVLRGQIQARITIDYDPAGVRVRCTLPLPANDPSGANL"
     gene            complement(4770..5252)
                     /locus_tag="VIY07_16900"
     CDS             complement(4770..5252)
                     /locus_tag="VIY07_16900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018071055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6383468.1"
                     /translation="MLIRQAEPRDDDAIWLILEPTFRAGETYPISRDISRSDALAYWH
                     SPGHSVFVADDEGAIVGTYYLRANNPGGGAHVANCGYVVAPGAYGRGVARDMCAHSLD
                     EARGRKFKAMQFNFVVSSNDRAVQLWQRMGFAIVGRLPRAFEHPWLGFVDAYVMSRTI
                     "
     gene            5646..6458
                     /locus_tag="VIY07_16905"
     CDS             5646..6458
                     /locus_tag="VIY07_16905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6383469.1"
                     /translation="MTSLKWFILIAVLGYGGLLALMYIFQRHLMYFPDPRRTAPAVAG
                     LPQADEVTLTSADGEKLIAWHVPPRGPRPVVIYFQGNAGGLNLRAGRFKWLTADGTGL
                     VALSYRGYGGSTGEPSEVGLINDAMAAYDFAAARYPAGRIVLWGESLGTGVAIALAAE
                     RKVGGIILDAPFTSIADVGASAYPFAPVRWLIKDPFRSDERIARVRAPLLALHGELDR
                     IVPIRFGEKLFSLAGEPKRMVRFPQGGHVNLDDYGAEKAVRVFLGEVVQPSN"
     gene            6468..6719
                     /locus_tag="VIY07_16910"
     CDS             6468..6719
                     /locus_tag="VIY07_16910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383470.1"
                     /translation="MKLRWLCAVALLAGAVPAVAAEPVRHIGIHVQPFYEAALTPDGR
                     PQVSVGKQYSALLGSSRRVDIIAARDLITASTSPRNDTS"
BASE COUNT         1387 a         1989 c         2038 g         1331 t
ORIGIN      
        1 gtcatatcca cggttcgagc ctgatcgaaa tgtcgctggg agttgcgatc ggcgcggtca
       61 cgtttacagg ctcggtgatc gcgttcctta aactttccgc ccgcatgagc ggcaagccga
      121 tcctcttgcc cgggcgccat atcatcaatc tcgcgctcgc agcggcattg atcttcttca
      181 tctatggctt cttcgtttca cagagccagc tggatttctg gctgatcacc ggcatttcgc
      241 tcctgctcgg cgttctgatc atcattccga tcgggggcgc cgacatgccg gtcgtgatct
      301 cgatgctcaa ttcctattcg ggatgggcgg ctgcgggcat cggcttcacg cttggaaaca
      361 cggcgctaat catcacgggt gcactggtgg gatcttcggg cgcgatcctg tcctacatca
      421 tgtgcaaggg catgaatcgc tctttcatct cggtcattct aggcgggttt ggtggcgaga
      481 cggcggggcc cggtggcggt gccgagcagc ggccggtgaa gctcggctcg gccgaggatg
      541 ccgcctatat catgaaaaac gcctccaaga tcatcatagt ccccggctac ggcatggcgg
      601 tggcgcaggc gcaacatgcg ttgcgcgaaa tggctgacaa gctgaagaaa gaaggcgtcg
      661 aagtgaaata cgccattcac ccggtggcgg gacggatgcc gggccacatg aatgtgctgc
      721 tggcggaagc caacgttcct tacgacgaag tgtttgaact cgaggatatc aattccgaat
      781 tcgcgcaggc cgacgttgcg ttcgtgatcg gcgccaacga cgtcaccaat ccagcggcgg
      841 aggaggataa aacctctccg atctacggaa tgcccgttct gcaagtgtgg aaagcaggca
      901 cggtgatgtt tatcaagcgc tcgctcgcgt ctggctatgc tggaatcgac aatccattgt
      961 tctatcgcga caacacgatg atgctgctcg gcgatgcgaa gaaaatgacc gaaagcatcg
     1021 tgaaagcaat gtgatcggcg cgcgtggcgt cgagcacgtt aatccaactg tttcaaattt
     1081 gaaaattaac gcgatgctcc cgttaactgc ggagggaatc gtttggagga ttgtgcgcta
     1141 ttgcgtatag cgcccatcac cgatgaatgg catacgcaaa aaaaattgat cgatgatttt
     1201 gtgaggcgcg accatgaccg acgacagaga gcagcaggac tgcgagatca tccagtttgg
     1261 ccgcagaccg gttccgccac gtgcctgcgt ggtcgagaac agaattcacg tgcggatgtt
     1321 tctggccgac atgctcgacg agatgggctt catcgcgtgc gaagccgaca caaccgacat
     1381 cagggcaacg ctccgagact ttcggccgga tgtgatcata ctggggccgc tcgacgccgg
     1441 gcttgaagtc caggctgtgc tgcggtcgct gcaggcgcag gcctatggcg gcgcggtgat
     1501 gctgttcggc ggccgcagtt ccggtgccct gatcagcaac catcaattcg gcgatcaggc
     1561 cggattgatg atgttgccgc cgcttggcac gccatttcgc gcccgcgacc tcgatgccaa
     1621 tctcgatcgg tttttgccgg ttcagccgcc gccaccgctt ccgctcgatg tcgacgaggc
     1681 gctttgcaac ggctggctgg agctgtggta ccaatccaag atcgatgcgc aatcgctggt
     1741 gccccgcgga gccgacgccc tcgttcgcgt gcgtcatccc atatggggtg tggtggcacc
     1801 ggcctattac ataccggcag ccgacgatcc ttacctgcat gcgctgtctc gctttgtgat
     1861 tgcgcgcgcg cttgccgatt ccgttcaatt tgcaggtgcc aacaatccgg ttcggatctc
     1921 catccctttg ccgttgcttg cgctggagga tctgcagttc attgaccgga tgctggagaa
     1981 gcttccggag aaagcccggc tcaatggatt gttgattgcg gtcgattgtg tcgacctcgt
     2041 caacgactat gcactggttc ggcacatcgg ctctcaactc gcactgcgca atattggaat
     2101 ggccctcaat gacgtcgacg cgcagggcgc cgcgcttgcc ggccgccgcg atcttcccgt
     2161 cgtggaaatg aaggtcagtc gcaaattcat tcaaggttgc gccgatgacc ggatcaagca
     2221 ggcacgctgc gccgaaattg tcgcgatcgc gcgcgaatcg ggtgccaggt cggtggccga
     2281 aggcgtggac aggcactcgg actttctcgc cgcgcgcgat ctcggctttg atctgcttca
     2341 aggcaacatg tttgccaagc cgatggcgcc tcgcaagttc gaatgcgcca tgctcgcccg
     2401 gcactacgct gcggttgcgt agcaggcggt cagcggacct ttagaccggc gcgcgtcgct
     2461 atttgctcca ggggaagaga accgtcggaa aatcggcggc gtagcggcgt tctttccgtg
     2521 cctccgggag ggtcgggggc agagccgacg ccggctcaac gactttgcgg tagagatgcc
     2581 aggttgcatg gccgagcagc ggcatcacaa ccgtgagccc aaaaaacaag ggcagcgagc
     2641 cgatcagcag cagcgccgca acgatcaaac cccaaaccat catggtgaag ggattgcggg
     2701 cgaccacacg aatcgatgtc agcagagcca ccgcggcgcc gacatcgcga tcaagcagca
     2761 acgggaacga gaccgcgctg atcgacaaca cgaggatggc gaaaagcaac ccaaccagat
     2821 tacccacgat gatcagattc catccgggcc gtgtcgtaag aacgtccttg atgaactctt
     2881 ctaccgatga cggagaggca tagccgaagt tcgcgatata gatggcgttc gcgaccgcca
     2941 cccagatcac gaagatgatc agcagcagaa agcccaaggc agcgatggcg ccgattgacg
     3001 atgattcaaa gatgtcgaaa gcgcgtgccg ccgaggtgtc gaggccggct tccctgcgcc
     3061 ggctcaactc ataaaggcca agcgcggcaa ccggcccgac aagcgcgaac cccgtggcca
     3121 atgggtaaag cagcggcagt accgagtagc cgaatgccag ccgcgccaga acaaagccaa
     3181 cgatcggata aataatgcag agaaacatgg cgtgggtcgg cattgcgtaa aaatcgtcag
     3241 cacccttggc gagtgcatca cgcaggtccg agagaccgat ttttcggacc accggttgcg
     3301 cgggatggct tcccgcaccg acaaggatgt ttgaataagc catgattacc tcccgagact
     3361 tggctcggat ggcgtggcgc aggaacgacg atcagagcga gcttttgccg gctatggtcg
     3421 cgtcacgtca tgagccaagc gaaactgtaa catgtgcgac gcgcacgcgc agatcacaaa
     3481 ttcgcgcctg acgggtcatt tgccggaagg ggcagagtgc aacgcacgcg cacgcccgcg
     3541 ggatcatagt caatggtgat ccgggcctga atttgcccgc gcagcacgaa cgccagcagt
     3601 cgcgaaccga atccctcccg cttcggcggc gtcactgcag gcccgctact ttcgacccag
     3661 tcaaacatca atgtgcgtcg cgcggcatcg atggtcacgc tccacgtgac ctcgaccttg
     3721 ccgccataga cagacagcgc tccgtacttt gccgcattgg cagtaagctc atgaatggcc
     3781 atccccagcg aaacggcaac ctgcgagttt agagcaacct ccggaccgct gagcacgatc
     3841 ctttcatggc ttccgtcatc gaaagcatcg agttcactgc gcaggatgtc ctcgaatttg
     3901 accgcgcgat catcgtcggc gagaagcaag tgcgttttgg caagcgactg tatgcggccg
     3961 aacagtgccg tcttgaagtc ctcgatgtta tcgaccgcgc gcgcggtcga gcccgcgatt
     4021 gcctgaacca tcgcgagcgt attcttgaca cggtgatgca gttcacgcac cagcagggtt
     4081 ttctgttcct cggcccgctt tcgatcggtg atgtccacca gcatgttcac cgcgccaatt
     4141 aaacgaccgg cttcatcatg aatcggagtc gggtagggga tgaatggcac gcgagtgcca
     4201 tccggccgct cggcggcagc ttccatgccc cgcacgacgc ggtctgcctt taatgcgatc
     4261 gccatcgggc atagatcgtg aggtagcggc gtgccgtcag gccagtacag cttccaggag
     4321 ccgcaccatt cgctggagcc gagaaggggg cgatgccccc agagcgctgc cgctgcctca
     4381 ttgtagtagg tgatccgccc cgcggcatcg gtggtgtaga ccgcggcagg cagtgcatcg
     4441 agcaactcac gaaatcggcg ttcgcgctcg cgcaccgtcg catgggaccg agcgccatca
     4501 atcggcacaa cattatcgcc ggcggtcgcc tgaccgaatg tggcgacagc gcgatcaagt
     4561 tcactctcaa ggaatccgat cttttggtcc attttcgagg aatcccccgt acgcaaacag
     4621 gcggctggcg cgccgacaaa attccgaccc ctagcgagaa ctcaggcagc gtcaaaaagt
     4681 tgcgccgctt gcggcaaatt ttcagccgtt tgatggctag gcttaatgaa cccttacctt
     4741 cagcccgcgc acccgatttc caagcacaat caaatggttc ttgacatcac gtaggcatcg
     4801 acgaagccca accacggatg ctcgaacgcc cgtggcagcc ggcccacaat tgcgaacccc
     4861 atgcgctgcc acaattggac agcgcgatcg ttcgaggaaa cgacgaaatt gaactgcatg
     4921 gccttgaatt tgcgcccgcg cgcttcatcc agcgagtggg cgcacatgtc ccgagcgacg
     4981 ccccggccgt atgcgcccgg tgcaacgaca tagccgcagt tggccacatg agcaccgccg
     5041 cccgggttgt tcgctcgcaa gtaataggtg ccgacaattg cgccctcatc gtcggctacg
     5101 aacaccgaat gtcctggtga gtgccaatag gcgagcgcat cggaccggga gatgtcgcgc
     5161 gaaatgggat aggtctcccc ggcccgaaat gttggctcca gaatgagcca gatagcgtca
     5221 tcgtcacgag gctcggcttg ccggatcagc attgaaggat cagcgtcccg tagacttcat
     5281 catgaccaga tccatctgac ctttgaaggc acgcattttt tcggcggcaa ccggaacggt
     5341 gcggccttct ttatcgaggc cgaatggctc gaaccccgcg ccgagcagcc gacggcatca
     5401 gccacgcggc gagaaatacg gccgtgccgc cgatgcgcgg gatacgaatc attggacggc
     5461 gacgctcacg gcatcacacg ctttaaccgc gttggagcga accgaagcac agtagccgca
     5521 ttggtgcgcg accgaaattc tggttcggcg cggcatggtg gtgtcctccc tggaaaggtt
     5581 gtgcaaggct aggaggaagg gctggctgcg acaacccacg cgacaaactc ctgtatgatg
     5641 aacgcatgac cagtctgaaa tggttcattt tgatcgctgt gcttggctac ggcgggctgc
     5701 tggcattgat gtatatcttc cagcgccatt tgatgtattt cccggatccc aggcgcacgg
     5761 cgccagccgt tgcgggcttg ccccaagccg atgaggtgac gctgaccagc gccgatggtg
     5821 aaaagctgat cgcctggcac gtaccacctc gtgggccgag gcccgtcgtg atctattttc
     5881 agggcaatgc cggcggcctc aatttgcgtg ccgggcgatt caaatggctg accgcagacg
     5941 gcaccggtct tgtggcattg tcctatcgcg gctatggcgg ctcgacaggc gagccaagcg
     6001 aggtcggcct gatcaacgac gccatggcgg cctacgactt cgctgccgcg cgctatccgg
     6061 cggggcgcat cgtgctgtgg ggcgagtcgc taggtaccgg agttgccatt gcgctcgctg
     6121 ccgaaagaaa agtcggcggg ataattctgg acgctccctt tacgtccatc gcggacgtgg
     6181 gcgcctcggc gtatccgttc gcgccggtgc gctggctgat caaagatccc tttcgttcgg
     6241 acgaacggat cgcgcgcgtg cgcgcgccac tgctcgcatt gcatggcgaa ctcgatcgca
     6301 ttgtgccgat aagattcggc gagaagcttt tttcgctcgc cggtgagccc aagcgcatgg
     6361 ttcgtttccc gcaaggcgga catgtcaatc tggacgacta cggcgccgag aaagcggtta
     6421 gggtgttcct tggcgaggtt gtgcagccgt ccaattgagg ggaaatcatg aagttgagat
     6481 ggttatgcgc tgtggccctg ctggctgggg ctgtgcctgc tgtcgctgcc gagccagttc
     6541 gccacatcgg cattcatgtg cagcctttct atgaagccgc gctcacgccg gatgggaggc
     6601 cacaggtttc cgtcggcaaa caatacagcg ctctgctcgg ctccagccgc cgcgtggaca
     6661 tcattgccgc gcgagacttg attaccgctt ctacgtcgcc aaggaacgat acatcgtgat
     6721 gtcggaagtg ttgaacgtga agacg
//
LOCUS       DATDHO010000862         2686 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_192949, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000862 DATDHO010000000
VERSION     DATDHO010000862.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2686
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_192949"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..431)
                     /locus_tag="VIY07_16915"
     CDS             complement(<1..431)
                     /locus_tag="VIY07_16915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate binding protein"
                     /protein_id="HEY6383471.1"
                     /translation="MKRREFITLVGGVAAWPISALAQQRAAKIHRIFWASTEAQPDPF
                     VEGFREGLRELGYVEGNNLALQLRYAPGNPDALRSALSELTRDKVDLAVSSGPAIRAM
                     KAATDIPVLFAISGDPVELGLVKSLARPGGNFTGSTFLSLE"
     gene            complement(774..1502)
                     /locus_tag="VIY07_16920"
     CDS             complement(774..1502)
                     /locus_tag="VIY07_16920"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383472.1"
                     /translation="MAALAPDVILAAGGAITGPLLQATRTVPIVFVHVPDPVGAGFVD
                     SLARPGGNATGFINFEYSVSAKWLELLKQIAPGVTRAAVLRDPVITAGTGQFGAIQSA
                     APPLGVEVSPVNVRDAGEIERAVAAFARSSNGGLIVTVSALAVVHRDLIITLAARHKL
                     PAVYYERNFVADGGLISYGPDYLDQYRRAAGYVDRILKGEKPADLPVQAPTKSKLVIN
                     LKTAKALGITMPPTLLATADEVIE"
     gene            complement(1554..1751)
                     /locus_tag="VIY07_16925"
     CDS             complement(1554..1751)
                     /locus_tag="VIY07_16925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383473.1"
                     /translation="MAERDSHRRAQDCRQRAEQLKGLAMAESYPERRKHFFDLATAYR
                     NAATMAEPQVTDGATRDSDFW"
     gene            complement(1945..2397)
                     /locus_tag="VIY07_16930"
     CDS             complement(1945..2397)
                     /locus_tag="VIY07_16930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383474.1"
                     /translation="MRSTATVITVFSCASFSEIIVRPSYAELPYTASLAESEGLMFGG
                     LNKKAARQSLFNVEINARRLILVANKAYQADPDDKQAFRADTEKILKVEDDLYRDISL
                     ALDNGASLDEICYRIEIAKIKEATVGLQAKMAIDDFVKVLAAHIKQSA"
     gene            complement(2477..>2686)
                     /locus_tag="VIY07_16935"
     CDS             complement(2477..>2686)
                     /locus_tag="VIY07_16935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383475.1"
                     /translation="LIAAPVASERMIVMMRFAFETITIVAMLALTFVLGRIWEIRQQM
                     IKKREHEEADFRRIPTARLTAEQNF"
BASE COUNT          534 a          822 c          771 g          559 t
ORIGIN      
        1 aattccagcg aaagaaacgt gctgcccgtg aagttgccac ccggccgggc caagctcttt
       61 acaagaccaa gttcgactgg atcgccgctg atcgcaaaga ggacggggat gtccgtggcc
      121 gccttcatcg cgcgaattgc aggaccgctt gacaccgcga ggtccacctt gtcgcgcgtc
      181 agttcagaca gcgcgctacg cagcgcatct ggattgccag gcgcgtagcg aagttgcaag
      241 gcaagattgt tcccctcgac gtacccgagc tcgcgtagtc cttcgcgaaa cccctccacg
      301 aacgggtcag gttgcgcttc ggtagatgcc cagaagatgc gatggatttt tgccgcccgc
      361 tgttgcgcaa gcgcggaaat cggccatgcc gccactccgc caaccagcgt gatgaactcg
      421 cgtcgcttca ttgccgcccc gaggattagg acaaccatcg tatcggctga agtcttcctc
      481 tagaaggtca atgtccggca actagggatg tccgctatgg gccaaaagcg gacatggcgt
      541 cagccgtagt ggcagaacgg cccacctctc agtagcagcg ccatgcagca cactgccgag
      601 atgtgccaaa agggacaatc actcgcttgt cacgcgaccg ccgggctgac cgtgctcagc
      661 gagcgacttt caggagctga ggcaaagaga acacgaagtc atcgatagct ttgggcttgt
      721 gacactcgaa gcatgcgcat gtccgctaag ggccaatagc gacattccgt cattcactcg
      781 atcacctcgt cagcggtggc gagcagcgtc ggcggcattg tgattccgag cgccttggcg
      841 gtctttaggt tgatcaccag cttggacttg gtcggcgcct gcaccggcag gtctgccggc
      901 ttttcaccct tgaggatgcg atcgacgtag ccggcggcgc gccggtactg atcaaggtag
      961 tcaggcccgt aggagatcag gccgccgtcg gcgacgaagt tacgttcgta ataaaccgcg
     1021 ggtagcttat gccgggccgc aagcgtgatg atcaaatcgc gatggactac cgccaacgcg
     1081 ctcaccgtca cgatcaggcc gccattcgag gagcgcgcga aggccgcgac ggcgcgctcg
     1141 atctcaccgg cgtcgcgcac attgactggg ctcacctcca ccccgagcgg cggtgccgcg
     1201 gactggatcg caccgaactg cccggtcccg gcggtaatga ctggatcccg aaggaccgcc
     1261 gctcgcgtca cgcccggtgc gatctgcttg agcagttcca gccatttcgc gctgacgctg
     1321 tattcgaaat tgataaatcc agtggcattg ccgccgggcc gcgccagact atcgacgaag
     1381 ccggcgccga ctggatcggg gacatgcacg aatacaatcg gcaccgtccg ggtcgcctgc
     1441 aacaatggcc ctgtgatcgc accgccagcg gcaaggatga catccggcgc gagcgcggcc
     1501 aattccgccg cgtgtttgcg tccgccctct caaatctctt tttgacgcga aggttaccaa
     1561 aaatcgctgt cgcgggtggc cccgtccgtg acctgcggct ccgccattgt ggccgcattc
     1621 cggtaggccg tcgccaggtc aaagaaatgc ttgcgccgct ccggatagga ctcggccatg
     1681 gccagccctt taagctgctc cgcgcgttgg cggcagtctt gtgcacggcg gtgtgaatca
     1741 cgctcggcca tgcttcaaat ctgaagccag ctttgcaaaa attgctaccg gaattgccac
     1801 cggatccaca actataggcg atgtcggcac actgcactga cgcggtgcca tctggtcggc
     1861 ggcggttgcc cgaaccgttg ccaggttgca ctgacgacgt aacgggacga cattgcacac
     1921 gatagcggtc ctgtggcggt ggtatcaggc gctttgctta atgtgggctg caagcacttt
     1981 aacaaagtcg tctatagcca ttttggcttg caggccgacc gtagcctctt tgatcttggc
     2041 tatttcaatc cggtagcaaa tttcgtctaa gcttgctcca ttatccaacg ccagggaaat
     2101 gtccctgtat aaatcatcct ctactttcag aattttctcg gtgtcggcgc gaaatgcttg
     2161 tttatcgtct gggtccgcct ggtacgcctt gttcgcaaca aggattagcc ttcgcgcgtt
     2221 gatttcaaca ttgaacaggc tttgccgcgc tgctttctta ttaagcccgc caaacatcaa
     2281 gccctccgat tcggctaaac tggccgtgta gggtaactcc gcatagctgg gtcgcacgat
     2341 gatttcgctg aatgatgcac agctaaaaac cgtgatgacg gttgccgtgg agcgcacagc
     2401 aacctcgcgt gaccgttagg tcctggtcct gcgtccggag cccggcatca acggcattcg
     2461 ggcgctacgc gctgcgctaa aagttttgtt ccgccgtgag gcgcgccgtc ggtatccgcc
     2521 ggaagtcggc ttcttcgtgt tcccgctttt taatcatctg ctgccgaatc tcccagatcc
     2581 ggcccagcac gaaggttagc gcgagcatcg ccactatggt tatcgtttca aacgcaaacc
     2641 gcatcatcac aatcatcctc tctgaggcga ccggtgccgc gatcag
//
LOCUS       DATDHO010000863         3917 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_439644, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000863 DATDHO010000000
VERSION     DATDHO010000863.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3917
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_439644"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..614
                     /locus_tag="VIY07_16940"
     CDS             <1..614
                     /locus_tag="VIY07_16940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383476.1"
                     /translation="GAVLLWDILFRGQLGFSISFLEEMYARNLGNLMMSPLRPTEFLL
                     ALMIMSLVRLSIGMIPVSLLAIAFFGFNLWALGLALAAFFANLILTSWAVGIFVAGLL
                     LRNGLGAESMAWTIMFLFLPLTCVYYPVAVLPGWLQYFAWALPPTYVFEGMRALLIDH
                     VFRADLMIGAFALNIVLFAVASLAFLKLLHSARVQGSLLQTSE"
     gene            752..2095
                     /gene="phaZ"
                     /locus_tag="VIY07_16945"
     CDS             752..2095
                     /gene="phaZ"
                     /locus_tag="VIY07_16945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HEY6383477.1"
                     /translation="MAIGEFGGAATLSDGSGTLLATPMYWYYEMGHAALNPARAFADA
                     TRLFFKNPANPLAHTSYGKSMAATMELFERSTRRYRRPEWDIDSTTVGGEKVPVQIKS
                     IWERPFCRLLHFERAFRQAPRRPQPRLLIVAPMSGHYPTLLRGTVETFLPNHEVYITE
                     WVDARMVPLSAGRFDLDTYIDYIISIVHLLGGDLHVIAVCQPSVPVLAAVALLEADND
                     PDVPNSMVLMGGPIDTRINPNEVNKLAERRGLNWFRNHVIAKVPFPHPGFMRDVYPGF
                     LQLHGFMSMNLDRHIEAHHNLFLHLVKGDGDSAQKHREFYDEYLAVMDLAAEFYLQTV
                     DTVFIRHALPKGEMTHRGRRVDPAAIRRVALMTVEGENDDISSVGQTEAAHALCINIP
                     EENKVHYVQPAVGHYGVFNGSRFRAEIAPRIADFALSHDGSRNLRSTLLKVVAQR"
     gene            2148..2912
                     /locus_tag="VIY07_16950"
     CDS             2148..2912
                     /locus_tag="VIY07_16950"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HEY6383478.1"
                     /translation="MMSIPFRALLYRRTSEPSAITVTCGGEIHPVRVRRHRQARRYTL
                     RILAASREVVLTMPTRGSLKHAKEFAQKHSAWITSRLRRLPGAAPFAHGEFLPLRGRE
                     CRIDHRPGARGTVWIETHGSGHLLCVAGEKPHLSRRVHDYLKREAKRDLQAASQSAAQ
                     ALGIAFKRVSVRDQSSRWGSCSSSGVLSYSWRLVMAPPFVLEYLAAHEVAHLIEMNHS
                     RRFWRLVESICPQMGRAKAWLDAHGADLHRYGLDSR"
     gene            2990..>3917
                     /locus_tag="VIY07_16955"
     CDS             2990..>3917
                     /locus_tag="VIY07_16955"
                     /inference="COORDINATES: protein motif:HMM:TIGR00710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEY6383479.1"
                     /translation="MLRPGTFALTTLLAALSAIGPLTTDMYLPSLPDIARQLNASTAQ
                     AQFTISAYLIGFAVGQIFYGPVSDRHGRKPILIAAIALYCIASLACSLSTSIEMLIVA
                     RAFQALGGSGGIVLARAIVRDIYSGARAGRELSLIASVMALAPVLAPIAGGFLQTWFG
                     WRAVFFTLVVAGVAGVGIVWAALPETLKSRAAEPLSMTSILRSYRLVARNPAYLAYLG
                     ITAASYAGLFVWISAAAFVLQDLYRLSPSDFGIAFALGSVGYMVGSALAARVVVAFGL
                     DGMLGIGAATCAAGGIAMVLAVACGFSSSLALV"
BASE COUNT          647 a         1208 c         1165 g          897 t
ORIGIN      
        1 tcggcgcggt attgttgtgg gatattctgt tccgcggcca gctcggcttt tccatttcct
       61 ttctggaaga aatgtacgcg cgcaatctcg gcaacctcat gatgtcgccg ctgcggccga
      121 cggaattcct gctcgcgctg atgatcatga gcctcgtgcg tttatcgatc ggaatgatcc
      181 cggtctcgtt gctcgcgatt gccttcttcg gatttaacct gtgggcgctc ggtctggcac
      241 tggccgcgtt tttcgccaat ctgattttga cgagttgggc cgtcggcatt ttcgtcgcgg
      301 gacttttgtt gcgtaacggc cttggcgcgg agagcatggc ctggacgatc atgtttctgt
      361 ttctgccgct gacctgcgtc tactatccgg tggcggtgct gcccggctgg cttcagtact
      421 ttgcctgggc gctcccgccg acctatgtct ttgaaggcat gcgcgcgctg ctcattgatc
      481 atgtgtttcg tgccgatctg atgattgggg cttttgccct caatattgtg ctgttcgcgg
      541 ttgcatcatt ggcttttttg aagcttttgc acagcgcgcg ggtgcaaggc tcgcttttgc
      601 agaccagtga gtagataaaa aaagcttgtg tttaatggga cttacagcgc cgttgggcgt
      661 tgtaaacggc ataccaacga ctattctcta tgttgacgct atgacagaaa cacgacagtc
      721 tgccgcactg cagcgagggc cgggggaatc aatggcaatt ggtgaattcg gcggagcagc
      781 gacgctctcc gacggcagcg gcacgttatt ggccacgccg atgtactggt attacgaaat
      841 ggggcatgcc gcactcaatc cggctcgtgc ctttgcggac gccacgcggc tgttcttcaa
      901 gaatccggcg aatccgctcg ctcacacctc ctatggcaag tcgatggcgg ccaccatgga
      961 gttgttcgag cgctcgaccc gccgatatcg ccgcccggaa tgggacatcg actcgaccac
     1021 cgtcgggggc gagaaggtcc ccgtccagat caagagcatc tgggagcgtc ctttctgtcg
     1081 gctcctgcac tttgaacgtg ctttcaggca ggcgccgcgc cggcctcagc ccagactgct
     1141 cattgtcgct ccgatgtcgg gtcattatcc gacattgttg cgcggcacgg tggagacttt
     1201 tcttcccaat cacgaggtgt acatcaccga atgggtcgac gcccgcatgg tgccgttgtc
     1261 ggcagggcgc ttcgatctcg atacctacat cgactacatc atttcaatcg ttcatctgct
     1321 gggtggcgat ctgcacgtga ttgccgtgtg tcagccctcg gtgccagtgc tggccgccgt
     1381 cgcgctcctg gaagctgaca acgatcccga cgtcccgaac tccatggtgc ttatgggtgg
     1441 gccgatcgac acgcgtatca atcccaacga ggtcaacaag ctcgccgagc ggcggggact
     1501 caactggttc cgcaatcacg tgattgccaa agtgccgttc ccgcatcccg gcttcatgcg
     1561 cgacgtctat ccggggttcc tgcagcttca tggcttcatg agcatgaacc tcgatcggca
     1621 tatcgaggcg catcacaatc tcttccttca tctcgtgaaa ggcgacggcg attccgccca
     1681 aaagcaccgt gaattctacg acgaatatct cgcggtcatg gatctcgccg ccgaattcta
     1741 tttgcagacc gtggataccg tgttcatccg ccatgccttg ccaaaagggg agatgacgca
     1801 tcgcggccgg cgcgtcgacc ctgccgcgat cagacgcgtc gcgttgatga cggtggaagg
     1861 cgagaacgac gatatctcga gcgtcggcca gacagaggct gcccatgcac tgtgcatcaa
     1921 cattcctgag gagaataagg ttcactatgt gcagccggcg gtcggtcact atggcgtgtt
     1981 caatggctca cgcttccgcg ccgagatcgc cccccgcatt gccgacttcg cgctgtcgca
     2041 tgatggcagc cgtaacctgc gctctacact cctgaaggtc gtagctcagc gttgatggcg
     2101 tgcgcgtgtg actggggaac atagctgacc cgttccgatt tgacccgatg atgtcgattc
     2161 cattccgcgc cttgctttat cgccggacca gcgagccatc ggccattacg gtcacttgcg
     2221 gtggggaaat tcatcctgtc cgcgtgcgcc ggcacaggca ggcgcgccgc tatacgttgc
     2281 gcattctcgc ggcgagccgc gaggtcgtgc tcaccatgcc cacgcgcggc agcctcaagc
     2341 acgcaaagga attcgctcaa aagcacagtg cctggattac gtcacggctg cgccggctgc
     2401 cgggcgccgc accttttgcc catggcgaat tcttgccact gcggggccgc gaatgccgca
     2461 tcgaccaccg acccggggca agaggcacgg tttggatcga gacgcacggg agcggacact
     2521 tgctgtgtgt cgccggcgaa aaacctcatc tgtcacgccg ggtgcacgat tatctcaagc
     2581 gcgaagccaa gcgtgacttg caggcggcga gccagtcggc cgcacaggcc cttggcatcg
     2641 cgttcaagcg cgtatcagtg cgcgaccagt ccagccgctg gggttcttgc tcatcgagcg
     2701 gcgtactctc ctattcctgg cgactggtga tggctcctcc gttcgtgctc gaatatcttg
     2761 ccgcccacga ggttgcccac ctcattgaga tgaatcactc gcgtcgattc tggcggctgg
     2821 ttgagagcat ttgcccgcaa atgggccgcg cgaaggcctg gctggatgcc cacggcgcag
     2881 atctccatcg ctacggcctg gattcgcgct agccttttgc tctcgcacca agttggtcat
     2941 cctgccggca tgcccggggc caggatacct ggacaaaccg attcggccca tgctgcgtcc
     3001 cggaacattc gcgcttacca cattgctggc ggcgttgagc gcgatcggtc cgctcacgac
     3061 cgacatgtat ctgccgtcac tgccggatat cgcccgccag ctcaacgcct cgacggcgca
     3121 agcgcagttc accatttccg cctatctcat cggatttgcc gtcgggcaaa ttttctatgg
     3181 gccggtgtcc gaccgacacg gccgcaagcc gatcctgatc gcggcgatcg cgctttattg
     3241 tatcgccagc ctggcttgct cactttcgac gtcgatcgaa atgctcatag tggcccgcgc
     3301 gttccaggca ctcggcggca gcggcggcat cgtactggcc cgtgcgatcg tgcgcgacat
     3361 ctattccggc gctcgggcgg gacgcgaatt gtctctcatc gcctcggtga tggcgcttgc
     3421 gccggtcctg gcaccgattg cgggtggatt cctgcagacc tggttcggct ggcgagccgt
     3481 gtttttcacc ctggttgtcg caggcgtcgc cggcgtggga atcgtgtggg cggcgttgcc
     3541 ggaaacacta aagtcgcggg ccgccgagcc gttatcgatg acttcgatcc ttcgttcgta
     3601 tcgactcgtc gcgcgcaacc ccgcgtatct cgcctatctc ggcattaccg ccgcgagcta
     3661 cgccggcctg ttcgtctgga tttccgcggc cgcatttgtg ctgcaggatc tgtaccggct
     3721 cagcccgtct gatttcggaa tcgctttcgc gctcggctcg gtcggctaca tggtcggctc
     3781 ggccctggcc gcgcgcgtgg tcgtggcatt tggactcgac ggcatgctcg gaattggcgc
     3841 ggccacctgc gccgccggcg gcattgcgat ggtgttggct gtcgcctgcg gattttcctc
     3901 gtcgttggca ctcgtct
//
LOCUS       DATDHO010000864         2538 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_390089, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000864 DATDHO010000000
VERSION     DATDHO010000864.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2538
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390089"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..554)
                     /locus_tag="VIY07_16960"
     CDS             complement(<1..554)
                     /locus_tag="VIY07_16960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylate ABC transporter permease"
                     /protein_id="HEY6383480.1"
                     /translation="MAEDIKAGTEAQVISEEQLRKAEEYVQQEEGAANRLSGWVGVAV
                     MAIAVAMSLFHLYAAYDIVPTIPLRYTHVAFVLLLSFLLFPVANRFRNRIQWFDVVPP
                     LIGIATIIYALMQGDDFTDRAAVPEKWDVILGAIFIVLVLEAARRATGWIMPLVAVCF
                     ILYAYFGPSLPPPWTHRGYDVSRLV"
     gene            complement(715..903)
                     /locus_tag="VIY07_16965"
     CDS             complement(715..903)
                     /locus_tag="VIY07_16965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383481.1"
                     /translation="MCHHGRIRLSAEDREDVRKLSGIMVPVYATAMVALLAFVVVTGG
                     SRQGELVASTTAPQALAE"
     regulatory      1000..1062
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01734"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Fluoride riboswitches increase expression of
                     downstream genes that help mitigate the toxic effects of
                     very high levels of fluoride; They are found in a wide
                     variety of bacteria and archaea; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="fluoride"
                     /db_xref="RFAM:RF01734"
     gene            1132..1507
                     /gene="crcB"
                     /locus_tag="VIY07_16970"
                     /pseudo
     CDS             1132..1507
                     /gene="crcB"
                     /locus_tag="VIY07_16970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714596.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
     gene            complement(1504..2484)
                     /gene="bioB"
                     /locus_tag="VIY07_16975"
     CDS             complement(1504..2484)
                     /gene="bioB"
                     /locus_tag="VIY07_16975"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HEY6383482.1"
                     /translation="MSLSHHTLPSALSAPRHDWTREEVRELFGLPFPDLIFRAAQVHR
                     EHFDPSEVQISTLLSIKTGGCPEDCAYCPQSAKFETGVTAEKLMNLKAVLTEARAAKA
                     GGASRFCMGAAWRSPKDRDLEKVCEMVEGVKALGLETCATLGMLTAEQALRLKGCGLD
                     YYNHNLDTSPEFYGEIITTRTYQDRLDTLEHVRAAGINVCCGGIVGMGESLEDRVGMI
                     ATLASLPVHPESVPINMLVRVEGTPLAHSKTLDPLDFVRTIAVARITMPASMVRLSAG
                     REDMSEETQALCFVAGANSIFYGPKLLTTPNPSRDRDLALLDKLGLRAMD"
BASE COUNT          491 a          764 c          767 g          516 t
ORIGIN      
        1 accaaccgcg acacatcgta accgcgatgc gtccagggcg gcggcaagct gggcccgaaa
       61 taggcataga gaatgaaaca gaccgcgacc aacggcatga tccagccggt ggcacggcgc
      121 gcggcttcca acaccaacac aatgaagatc gcgccgagga tgacgtccca tttttccggc
      181 acggccgcgc ggtcggtgaa atcgtcgcct tgcatcaacg cgtagatgat ggtcgcaata
      241 ccgatcagcg gtggcaccac atcgaaccac tggatgcgat tgcgaaagcg gttcgccacc
      301 ggaaacagca ggaagctcag cagaagcacg aaagcgacgt gggtgtagcg taacgggatc
      361 gtaggcacga tgtcgtaagc ggcataaagg tggaacagcg acatggcgac cgcgatcgcc
      421 atgacggcca ctcctaccca gcccgaaagg cggttggcgg cgccctcctc ctgctggaca
      481 tattcctccg ccttgcggag ctgttcttcg gaaatgactt gcgcttcggt gcccgccttg
      541 atgtcttccg ccattgtccc ctcgcctgaa gcggtgtgac ccccgcctta tggatgcgag
      601 gctagcatgg gccatggcgg caggaatacc tgcggaaacc cgccgttatc atgctcgtcc
      661 aagcagcgtc gccacggcag ccaaaggcag cgaacctgcg cgctgcaaaa gcggctattc
      721 agcgagtgct tgcggggccg tagtcgaagc aaccaattcg ccttgtcttg aaccgccggt
      781 gacgacaacg aaggcaagca gggcgaccat agcggtggcg tagaccggga ccatgatccc
      841 cgaaagtttc ctgacgtctt ccctatcttc ggccgagagc ctgatgcggc catggtggca
      901 catcggcgcc tccttgggtt gcgcatgtaa gcctattgct tggcgggcaa tctgtctgcg
      961 gccctttccg ttgaccctgc atcagtctgt ctttacgttt gcggcgatgg ggatggggtc
     1021 ccccgaaacc gcccgcaagg ggctgatgac tcctaccgcg caaacacggc ggtaggaatc
     1081 tgtccgccgc agggcggctt ttctttgccc tgagacatgg gaattcattc gatgggctat
     1141 ctcattgtgt tcctgggcgg cggcatcgga gccgcgcttc ggcatggctt caatctcgcc
     1201 ttcgcacgcc tgttgggcaa cgcgtttcct tacgcaacgc tgttcgagaa cgtctccggc
     1261 tcgatcgtga tggggatgct ggtcgcgtat tttgcattca aggggggcat cacacagcac
     1321 tggcaacttt ttctgaccac cggcattctc ggcggctaca ccacgttctc gacgttctcg
     1381 ctcgatgtgg cgttgcttat atgagcgcag cgaactggga ctggctgcac tttatgtggc
     1441 gttgtcggtc gcgctgtcga ttggaggttt gttcgcaggt ctcgctcttg tgcgcaatct
     1501 cgcctagtcc atcgcccgca ggccgagttt atcgagcagc gccagatcac ggtctcggct
     1561 cggattcggc gtggtaagca gctttggccc gtagaagatc gagttggcgc cggcgacaaa
     1621 gcagagagcc tgcgtttcct cgctcatgtc ctcgcggcca gcagatagtc gcaccatcga
     1681 tgccggcatt gtgatgcgcg caacggctat ggtgcgcacg aagtcgagcg gatcgagggt
     1741 cttgctgtgg gcaagtggcg tgccttccac ccgcaccagc atgttgatcg gcacactttc
     1801 cggatggaca ggcaggctgg cgagcgtcgc aatcatcccg acgcggtcct caagactttc
     1861 gcccatcccg acaattccgc cgcaacagac gttgatgccc gccgctcgca catgctcgag
     1921 cgtgtcgaga cgatcctggt aggtgcgcgt ggtaatgatc tcgccgtaga actcaggcga
     1981 cgtgtcaaga ttatgattgt agtaatcaag gccgcagccc ttgaggcgca gcgcctgctc
     2041 ggcggtcaac attcctaatg tggcgcacgt ttccaggccg agtgccttaa cgccttcgac
     2101 catctcgcag actttttcga ggtcgcggtc cttgggcgat cgccaggctg cacccatgca
     2161 aaagcgagac gccccgccgg ctttggcggc gcgcgcttcg gtaagtaccg ccttgagatt
     2221 cattaatttt tcagccgtca caccggtctc aaactttgcc gactgtgggc agtaggcgca
     2281 gtcttccggg catccgccgg tcttgatcga gagcagggtt gaaatctgca cctcggaagg
     2341 atcgaagtgt tcgcggtgca cctgcgcggc acgaaagatc aggtctggaa atggcagccc
     2401 aaacagctca cgcacctcct cgcgcgtcca gtcgtgacgc ggcgcagaca gtgcggacgg
     2461 cagcgtgtgg tgcgacagcg acatccctgg ccctcggcgt agctcaacaa cctttatata
     2521 gcaaagctga gatggcca
//
LOCUS       DATDHO010000865         3577 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_292167, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000865 DATDHO010000000
VERSION     DATDHO010000865.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3577
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_292167"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..394
                     /locus_tag="VIY07_16980"
     CDS             <1..394
                     /locus_tag="VIY07_16980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HEY6383483.1"
                     /translation="FNEVQSYLKERTGSDDMNVYLKPLGQSLAHLQEASMWFMQNAIA
                     KPDNAGAGSYDYMHLFGLVALGYMWCRIAEAALAKLPKANGSAARLNAKLVTARFFME
                     RMLPETATRLARIQAGAGSTMELPDEAF"
     gene            618..1478
                     /locus_tag="VIY07_16985"
     CDS             618..1478
                     /locus_tag="VIY07_16985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383484.1"
                     /translation="MATSTRTAPVASDTALSIQWSAIIAGAIGAAALAFVLHTFAGAI
                     GLSVSSAAPTWRDTSWALVLISGLYLLLMALASYGFGAYLAARLRTPVAGGPEGVEFS
                     DGMHGLIVWALATLLTGLIAVAAIQAVPRLAAPPGASGGTSASVAGENIIAYDLDRLF
                     RSERRPLGVDANLSYPRSEAARILLTASSHRGMQADDRAYLVRLVSAMTGLAPPDAER
                     RVADVITRANENIARARATVVILGFMIGAAALLGAVAAWFAACAGGRQRDGRETLHPL
                     WDWGRPISRT"
     gene            complement(1493..2734)
                     /locus_tag="VIY07_16990"
     CDS             complement(1493..2734)
                     /locus_tag="VIY07_16990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383485.1"
                     /translation="MPGHSVSAQTGAKPGDVESTYAWLRLAVALAISTLAGVGMWSIM
                     VALPTIQADFGITRADASLPFTMVMIGFAGGGVLMGRLADRYGIAVPLGLGILALSAG
                     YLATGWAPSLWFVALAHGLIGIGCSASFGPLMADISHWFLRRRGIAVALAATGNYLAG
                     TIWPPVVQYFISHSGWRATHIGIGLFCLVTVLPLVFAMRRQIESHNDDEADAAAARRQ
                     AEAPFSPMTLQILLCIAGVGCCVAMAMPQVHIVAYCGDLGYGVARGAEMLSMMLGFGI
                     ISRVASGFIADRIGGVRTLLLGSVLQGVALFLYLWFDGLVSLYVISALFGLFQGGIVP
                     SYAIIVREYFSPREAGTRLGLILMATLLGMALGGWMSGLIFDLTGSYRAAFLNGLGWN
                     LVNVSIMAWLLQRSRHRTAFA"
     gene            complement(2790..>3577)
                     /locus_tag="VIY07_16995"
     CDS             complement(2790..>3577)
                     /locus_tag="VIY07_16995"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY6383486.1"
                     /translation="VLPLYHPLRLYEEICMLDHLSGGRLTVGVGRGGALIEHQRFGID
                     PAVAPAMYQEAFAVLMRAFESDVLNFEGRFFNYKDYVIQVKPVQHPHPPIWYGAPHAD
                     AVAWAAPRAVNVVSLGPGARARAISDRYHEEWKKLGRDGSTLPGIGITRHIVVAENDE
                     EARAIAQAAYPPWREAIEFLWQRSKMDFVLKEIYPPDFVTLERIGHGVAGSPATVRNY
                     LARLHEETRVNTVLCQMIFGSMRFDDAARSIRLFGREVIPAFA"
BASE COUNT          733 a         1096 c         1089 g          659 t
ORIGIN      
        1 cttcaacgag gttcagagct acctcaagga gcgtaccggc agcgatgaca tgaatgtcta
       61 tttgaagcct cttggccaat cgctcgcgca tctgcaggag gcgtcgatgt ggttcatgca
      121 gaacgccatc gccaagccgg acaatgccgg tgccgggtcg tacgattata tgcatctctt
      181 cgggctggtg gcgcttggct acatgtggtg cagaatcgcc gaggccgcgc tcgccaaatt
      241 gccaaaggca aacgggtcgg cggcgcgcct gaacgccaag ctggtcacgg cgcgtttctt
      301 catggaacga atgcttccag aaactgcgac gcggctggca cgcatccagg ccggcgccgg
      361 ttcaaccatg gaattgcctg acgaggcctt ctagcttcgc gtcacgcgtc gcattgcggc
      421 gcaaaattgg actcgaatcg ggaacaatag cccgaacctc cggtttgtgt gttgaccaag
      481 cctgtgcagg gcctggcacg cgacggaggt ttgcatgaac ggtctcattt atctcatcgg
      541 gctcattgtg gtgatcatgg cggttctgtc acttcttggc ctgcgctgac cgcgccagaa
      601 aacaaggagg gcgggtcatg gccaccagca cgcgtactgc gccggtcgca agcgacacgg
      661 ctttgagcat tcaatggagc gcgatcattg ctggcgcgat cggcgcggcc gcgcttgcat
      721 tcgtccttca cacttttgcc ggtgccatcg gcctgtcggt ttcgtcggcc gcccccacgt
      781 ggcgagacac atcatgggcc cttgtgctca tttcgggcct ttacctgctt ttgatggctc
      841 tcgcttcata tggcttcggt gcctatctcg cggcgcgact gcgcacgcct gtggctggcg
      901 ggcctgaggg cgtcgagttt tccgacggga tgcatgggct gatcgtctgg gcgctggcga
      961 cgttactcac aggtttgatt gccgttgcgg ccattcaggc agtgccgaga ttggctgctc
     1021 ccccgggggc atccggcggg acttcggcat ctgtcgcggg cgagaacatt atcgcgtacg
     1081 accttgatcg cttgtttcgc agcgagcgac ggcctctagg ggtcgatgcc aatctcagct
     1141 atcctcgctc cgaggccgcc cgcattcttt tgaccgcgtc gagccatcgc ggcatgcagg
     1201 ccgacgatcg tgcctatctc gtccgccttg tctccgcgat gacgggcctt gctcccccgg
     1261 atgccgagcg ccgcgtcgcc gatgtgatca cgcgagccaa cgaaaacatt gctcgcgcgc
     1321 gagccactgt cgtcattctc gggttcatga tcggcgcagc cgcattgctc ggagccgttg
     1381 ccgcctggtt tgccgcgtgc gcgggcggac gtcagcgcga cggtcgcgag acgttgcacc
     1441 ccttgtggga ttggggccga ccgatttccc gcacctgagc cggcgttcag cctcaggcaa
     1501 acgctgtgcg atgccgcgag cgttgcagca gccatgccat gatcgacacg ttcaccaggt
     1561 tccatccaag gccgttcaga aatgccgccc ggtaggagcc ggtgagatcg aagatcaggc
     1621 ccgacatcca gccgccgagc gccatgccga gcagcgttgc catcagaatg agtccgagac
     1681 gggtgcctgc ctcgcgtggg gaaaaatatt cgcggacaat gatggcgtag ctgggcacga
     1741 tgccgccctg gaacaggccg aacaaagccg agatcacata gagggaaacg agtccgtcga
     1801 accacagata aagaaacagg gcgacgcctt gcagcaccga gccgagcagc agcgtccgca
     1861 cgccgccgat gcggtcggca atgaagcctg aggcgacgcg gctgataatt ccgaaaccga
     1921 gcatcatcga aagcatttct gcaccgcgcg cgacgccgta accgagatcc ccgcaatacg
     1981 cgacgatgtg cacctgcggc atcgccatag ccacgcagca gccgactccc gcgatacaca
     2041 acaggatctg caaagtcatc ggcgagaatg gcgcttcagc ttgccgccga gcggcggccg
     2101 cgtcggcctc gtcatcatta tggctttcga tctggcggcg cattgcaaac acaagcggca
     2161 gaacggtgac caggcaaaac agccctattc cgatgtgggt cgcccgccag cccgagtgcg
     2221 aaataaagta ctgaacgacg gggggccata tcgttccggc gaggtaattg ccggttgcgg
     2281 caagcgcgac cgcgatgccg cgccgacgca aaaaccaatg cgagatgtcc gccatcaatg
     2341 gcccgaagct ggccgaacag ccgatcccga tgaggccatg ggcgagggcg acgaaccaca
     2401 ggctcggcgc ccagccggtt gcgagatatc cggccgagag tgccaaaatg ccgaggccca
     2461 gaggaacggc gattccgtag cgatcggcga gacgacccat gaggacgccg ccgccggcga
     2521 aacctatcat caccattgtg aatggaagag acgcgtcggc tcgcgtgatg ccaaaatcgg
     2581 cctggatggt cggcagtgcg accatgatcg accacatgcc gacgcccgcg agcgtgctga
     2641 ttgcgagggc gacggcaaga cgcaaccagg cgtacgtcga ttcgacatcg ccgggcttgg
     2701 cacccgtttg cgcgcttact gaatgacccg gcatttcaag ccgttggtaa catcagcgac
     2761 cacagtaatc cagatagaca gctatgcggt tatgcgaacg cagggatgac ctcgcgcccg
     2821 aacagcctga ttgatcgcgc cgcgtcatca aaacgcatgc tgccaaaaat catctgacag
     2881 agaacggtat tgacgcgggt ctcctcatgc agacgggcaa gataattccg cacggttgcg
     2941 ggcgaaccag caacaccgtg accaatacgt tccagcgtca cgaaatcagg cggataaatc
     3001 tccttcagga caaagtccat ctttgaccgc tgccaaagaa attcaatggc ttcgcgccat
     3061 ggcggatagg cagcctgtgc gatcgcgcgt gcctcttcat cgttttcagc aaccacgatg
     3121 tgccgcgtaa tgcctatgcc gggaagcgtg ctgccatcgc gtccaagttt cttccattct
     3181 tcgtgatagc ggtcgctgat cgcccgcgcg cgcgccccgg gcccaagcga taccacatta
     3241 acggcgcgcg gtgccgccca ggcaaccgca tcggcatgag gtgcgccata ccagatggga
     3301 ggatgcgggt gctgaaccgg cttaacctga atgacatagt ccttgtaatt gaaaaatcgg
     3361 ccttcgaaat tgagcacgtc ggattcgaag gcgcgcatga gaacagcaaa agcttcctga
     3421 tacatggcgg gcgccaccgc cggatcgatc ccgaaacgct ggtgctcgat tagcgctccg
     3481 ccgcggccga cgccgactgt cagacggccg ccgctcagat ggtcgagcat gcagatttct
     3541 tcgtacagac gcagtggatg ataaagcggc aacacat
//
LOCUS       DATDHO010000866         1664 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_240472, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000866 DATDHO010000000
VERSION     DATDHO010000866.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1664
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240472"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(40..981)
                     /locus_tag="VIY07_17000"
     CDS             complement(40..981)
                     /locus_tag="VIY07_17000"
                     /inference="COORDINATES: protein motif:HMM:NF024874.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6383487.1"
                     /translation="MEDGFRNVDPNFRRPSGLTRWNFVVRRLLAASIAPRTFEAPRIA
                     NDGAALRAGNVNPSVTWVGHATVLLQLDGLNILTDPNWNERASPLSWAGPRRLSPPGL
                     AFEDLPRIDAVVISHDHYDHLDLNTVKRLAGAHDPLFLVPLGMKAWFADNGMSRVEEL
                     DWWQEHEYRGLKFVCLPAQHFSQRTWWDGNRRLWASWAVLSRERRVYFSGDTGYFPGF
                     TEAGKQLGPFDLAAIAIGAYVPPEIMKAVHLTPEEAVQAFLDLDARVLLGIHWGTFDL
                     AEEPLGEPPQRMVTEARRRGIDAARAWILKIGETRPW"
     gene            1282..>1664
                     /locus_tag="VIY07_17005"
     CDS             1282..>1664
                     /locus_tag="VIY07_17005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383488.1"
                     /translation="MTDSHNITLPLRGLDEGAALRSILEGTANETGERFFAALVENLA
                     RALKTHGAWVTEYIQECRRLRALAFWMDGQWIQNYEVDIAGTPCEQVIETANLVHFPD
                     NLLELYPDDPDIKDVGAVSYLGMPL"
BASE COUNT          364 a          474 c          487 g          339 t
ORIGIN      
        1 tcgatcggtg agattctcgt tgcgccgggc ggcgattttt taccaagggc gtgtttcgcc
       61 aatcttgaga atccaggcgc gcgcggcgtc gatgccgcgg cggcgggctt cagtaaccat
      121 gcgttgcggc ggttcaccca acggttcttc cgccagatcg aaagtccccc aatgaatacc
      181 gagcagcacg cgcgcatcaa gatcgagaaa ggcctgcacc gcttcctccg gggtaaggtg
      241 cacggctttc atgatttcag gcggtacgta tgcgccgatg gcgatggcag ccaggtcgaa
      301 tgggccgagc tgtttaccgg cctccgtaaa cccggggaaa tagccggtgt cgccgctaaa
      361 atagacccgc cgctcacggc tgaggaccgc ccatgacgcc cacagccgtc tgttgccgtc
      421 ccaccacgtt cgctgagaga aatgttgcgc tggcagacaa acgaatttta gaccgcggta
      481 ttcgtgctcc tgccaccagt ccaactcctc tacccggctc atgccgttgt cggcaaacca
      541 tgccttcata ccgagcggca ccaggaagag cggatcgtgt gccccggcca gtcttttgac
      601 cgtgttgaga tcgaggtgat cgtaatggtc gtgagatatc accaccgcat cgattctcgg
      661 cagatcttcg aaggccagcc caggcggact caagcggcgt ggcccggccc aactcagcgg
      721 gcttgcccgc tcattccaat tcggatcggt gagaatattt aggccgtcca actgtaacaa
      781 gacggtcgcg tggccgaccc aggtgacgct tgggttgacg ttgccggcgc gcagagcggc
      841 gccatcattg gcgatgcgcg gagcctcaaa agttcgcggc gcgatggagg ccgccaaaag
      901 ccggcggaca acaaaattcc accgagtcaa gcccgaaggc cggcgaaaat ttgggtcgac
      961 gttgcgaaaa ccgtcctcca cgtggtgccg cgggtggcca ggaagtggct gtccctcggc
     1021 actccgacag gcgacgatca acaacaacgc agccagcaac aaactttgtt tgggacctat
     1081 acacagattg agcattttca gaaatatacc ttgtaacacc gattgactcc atggtttaag
     1141 actgtcaatc gcactctggc cgctcaagct tgacatgagc atgccggtct cggatattgt
     1201 gggtgcggcg tgagagagtg ggtcttatgg tgaaatcgac tttttggatt ccggcaaagg
     1261 cggcaacgca tagctatttc tatgactgat agccacaata tcacgcttcc cctgcgcgga
     1321 ctcgatgaag gggctgcttt gcggagcatc ctcgagggaa cggcgaacga gacgggggag
     1381 cgattctttg ccgcgctcgt tgaaaatctc gccagggcgc tgaaaaccca cggcgcttgg
     1441 gtcactgaat atatccaaga atgtcgaagg ctgcgggccc ttgctttctg gatggacggg
     1501 cagtggatcc aaaattacga ggtggatatc gccggaacac cctgcgagca agtcatcgaa
     1561 acggccaacc tagtccactt ccctgacaat ttgcttgaac tgtatccgga tgatccggac
     1621 attaaagatg tcggcgccgt cagctacttg ggaatgcctt tgaa
//
LOCUS       DATDHO010000867         2378 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_390290, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000867 DATDHO010000000
VERSION     DATDHO010000867.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390290"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..279
                     /locus_tag="VIY07_17010"
     CDS             <1..279
                     /locus_tag="VIY07_17010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HEY6383489.1"
                     /translation="VNAAKFGALSVPTGRVSITWSRRENTDGSAVELDWRERLGPKVK
                     IRRKKGFGTMVIERNLARALDAEINMDFDPDGLHCHIVIPASQVLAMR"
     gene            366..683
                     /locus_tag="VIY07_17015"
     CDS             366..683
                     /locus_tag="VIY07_17015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383490.1"
                     /translation="MRGLMPYIVAGIAVVVAMDIVAPPLGLGLATVAQSATDPNQQIV
                     DRTRKGDRLQLPKANGRQTPPAGSPMPIGCEGAFSALSAGAKANFPGRCLAERARSRS
                     LLG"
     gene            758..1240
                     /locus_tag="VIY07_17020"
     CDS             758..1240
                     /locus_tag="VIY07_17020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF992 domain-containing protein"
                     /protein_id="HEY6383491.1"
                     /translation="MHRPLIGLAALAIAAAAALPVPTMAQAERTKAGTLTCDISGGLG
                     LIITSRKEVACMFTPSQPGPREVYVGAINKFGLDIGATAGGEMVWAVFAPTTRRIGAL
                     AGNYAGASAEATVGAGLGANVLVGGSDRTIALQPLSVQGQTGLNVAAGVTELILRPAR
                     "
     gene            complement(1343..2299)
                     /locus_tag="VIY07_17025"
     CDS             complement(1343..2299)
                     /locus_tag="VIY07_17025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HEY6383492.1"
                     /translation="MPKLLFDLRGRRIFVAGHRGLVGSAIERRLAYENCTILTADRRA
                     LDLTDQQATETWLKRSRPDAIFLAAGLVGGIHANNTYPADFIANNLAIALNVIRSAHT
                     FGVKKLLALGSSCIYPKFAEQPMHEDMLLTGPLEPTNEWYAVAKIAAIKLCDAYRKQH
                     GDDFISVMPTNLYGPNDNYHPLNSHVPAALIRRFHEAKLSKMPEVTVWGSGKPRREFM
                     AADDAADACVFVMKYYSDAGFLNVGTGTDVTIGEFAHLIAQTVGYGGKIRYDTSRPDG
                     PPQKLLNVSKLKELGWSSKIPLSEGLAVAYKDFLTTGGRVAA"
BASE COUNT          447 a          675 c          746 g          510 t
ORIGIN      
        1 gtcaatgcgg ccaagttcgg cgcgttgtcc gtgccgaccg ggcgcgtatc catcacatgg
       61 agtcgacgcg aaaatacgga cgggagcgcg gtcgaactgg attggcgcga acggctcggt
      121 cccaaggtga agatcaggcg caagaagggg ttcggcacca tggttatcga gcgcaatctc
      181 gcgcgcgctc tcgatgccga gatcaacatg gattttgacc cggacgggct tcactgtcac
      241 attgtgatcc cggcgagcca ggttctcgcc atgcgctgag cgcgcccgga acatattccc
      301 ccgttcgccg tttccagttt cgtgaacacg ccgccgaatt gaccggcgtc tggtggagtg
      361 cgtcgatgcg cggtttgatg ccgtatattg tggcaggcat cgcagtggtg gtcgcgatgg
      421 acatcgtcgc gcctccgttg gggcttgggc tcgccaccgt cgcgcaatcc gcaacggatc
      481 ccaaccagca gatcgttgat cgcacgcgca agggcgaccg actgcagttg ccaaaggcaa
      541 acggacggca gactccgcct gcaggctcgc cgatgccgat cggatgcgaa ggtgcgttca
      601 gcgcactttc tgccggcgcg aaggcgaatt ttcccggtcg ttgtcttgct gaacgggcgc
      661 gttcccgctc cttgctcggt tgagcggtca tcaacgacgg aactttttgt tccccggcac
      721 gtttccagcc catcgttcac tggaaaggga gtcacgaatg catagaccat tgattggtct
      781 tgctgccttg gccattgccg cggcggcagc actgcctgta ccgacgatgg cgcaagctga
      841 aagaaccaag gccgggacgc tgacgtgcga catctcgggg ggcctcggct tgatcatcac
      901 ctcgcgcaag gaagtggcgt gcatgtttac gccgtcccag ccgggaccgc gtgaggtgta
      961 tgtcggcgcg atcaacaagt tcgggctgga cattggcgcg accgccggtg gcgagatggt
     1021 gtgggccgtg tttgcgccga caacgcgccg aattggggcg ctcgccggca attacgctgg
     1081 cgcgagcgcc gaggcgaccg tcggcgccgg gctcggcgcc aacgtgcttg tcggcggttc
     1141 ggaccgcacc attgccttgc agccgctttc agtgcagggc cagaccggtc ttaacgttgc
     1201 cgcgggcgtg accgagctga ttttgcgtcc cgcgcgctga cctactcttc acctcacgcg
     1261 ccgaatcgtc atggccgggc ttgtcccggc catctacgtc ttgatctgga cgtcatgcgc
     1321 gcacaggtct tttactggtg agttaggcag cgacacgacc gccggtggtg aggaagtctt
     1381 tgtaggccac agcgagccct tcggatagag ggattttgga agaccaaccc agttctttca
     1441 gcttcgagac atttagtagc ttctgcggcg gcccatcggg acgcgacgtg tcatacctga
     1501 ttttcccgcc ataccctacg gtctgtgcga tcaagtgcgc gaactcgccg atggtcacat
     1561 cggtgccggt tccgacatta agaaatccag catctgagta atatttcatc acgaatacac
     1621 aggcatcggc tgcatcgtcg gcagccataa attcacgccg cggtttgccg ctgccccaca
     1681 cggtgacttc gggcatcttg cttaatttgg cttcgtgaaa gcgccgaatg agggcagcag
     1741 gaacgtggct gttgagcggg tggtaattgt cgtttgggcc gtacaagttc gttggcatga
     1801 cagagataaa atcatctcca tgctgcttgc gatacgcgtc acataatttg atcgccgcga
     1861 tcttggcgac tgcgtaccat tcgttggtcg gctccagggg gcctgtgagc agcatgtctt
     1921 cgtgcattgg ctgctcggcg aattttgggt agatgcacga agatcccagc gcgagcaatt
     1981 tctttacgcc gaatgtgtgt gcgctgcgta taacgttgag agcgatcgcc aggttgtttg
     2041 cgataaagtc ggctgggtag gtattgttgg cgtggatgcc gccgaccaat cctgccgcga
     2101 gaaagattgc atccgggcgc gagcgcttga gccaggtttc cgtggcctgc tgatccgtca
     2161 ggtcgagcgc gcgccgatcc gcggtcaata ttgtacagtt ttcgtatgcc aaccggcgtt
     2221 caatggccga tccaaccaat ccacggtggc cagcgacaaa gatacgcctg ccgcggagat
     2281 cgaaaaggag cttggggatc atccgtttgg tttggagtag ccccggaacg atacgaaagc
     2341 aaatcatatt ccggaacggg aatatcggac agggaccg
//
LOCUS       DATDHO010000868         2505 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_240514, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000868 DATDHO010000000
VERSION     DATDHO010000868.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2505)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2505)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2505
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240514"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            124..1410
                     /locus_tag="VIY07_17030"
     CDS             124..1410
                     /locus_tag="VIY07_17030"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF006169.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEY6383493.1"
                     /translation="MEVLWDRTSLVLGPAMTEKEHHSPGMNDLQMTPQAYRSCFVPHD
                     IKAPIKGAASGPLAGLTAVVKDMYDIAGERTGCGNPEWLANHAPATRHCPPVQKILDA
                     GATIIGKTVCDEFFYSVSGANAHYGTPVNARAPGRLSGGSSAGSAAACGAGLCDFALG
                     SDTGGSVRVPASFNGIYGLRPTHERIEHAGVADMAPSFDVPGWFAATPGVFRNVGAVL
                     LDNQRVTAEIGRVVVLEDAFAQAEEPVADLLRTALEFMSDDLPEMLHGKIAPEGLDAW
                     REAFRIVQAYETWQTFGAFISEHKPDIGPGVRERMQFAATVTKAQADGARAIQLKARE
                     HIRQIAMPGTILALPTAPSVAPDIDIAGAELEEFRVRAMRLTCTAGVSGLPQMSIPAG
                     TIDGCPVGLSFIGWAGGDEALLDLACELSRHCGMAA"
     gene            1582..2274
                     /locus_tag="VIY07_17035"
     CDS             1582..2274
                     /locus_tag="VIY07_17035"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEY6383494.1"
                     /translation="MTDQFLDRKTIAELTARMYLDTGAVRFMSDKPFIFTSGWASPVY
                     NDSRWLMSFPDVRSTLMDFAVHTIERDVGRDKIDSVAGGETAGIPFAAWVADRLHLPM
                     QYVRKKAKGFGRGAQIEGQLIPGQRVLLVEDLATDGKSKVNFINALREAGGKCEHCFV
                     IFFYDIYPQSRKILGDLGVTLHALTTWRDLLAVAKASGEFEPTMLAEVEKFIHDPAGW
                     SKAHGGAAEAAE"
BASE COUNT          481 a          784 c          805 g          435 t
ORIGIN      
        1 catggccggg cttgtcccgg ccatccacgg tttgctttac tttttttgca ataagacgtg
       61 gatgcccgcg acataggcgt gcgaaagcac gccgtccttc ggacggctat gcgcgggcat
      121 ccagtggaag tcttatggga ccggacaagc cttgtgcttg gtccggccat gacagaaaaa
      181 gagcaccact cgcccggaat gaacgatctt caaatgaccc cgcaagccta tcgcagctgc
      241 ttcgttcccc acgacattaa ggccccgatc aagggtgccg cgagtggacc gctcgccggg
      301 ctgacggcgg tggtgaagga tatgtacgac atcgcgggcg agcgtaccgg ctgcggcaac
      361 ccggaatggc tcgccaatca tgcgcccgcc acccgtcatt gcccgccggt gcagaagatt
      421 ctcgacgccg gggcgaccat catcggcaag accgtttgcg atgagttctt ctacagcgtg
      481 agcggtgcca acgcgcatta cggcacgcca gtgaacgcgc gcgcgccggg ccgtctgtcc
      541 ggcggatcgt ccgcgggctc ggccgccgcc tgcggcgccg gcttgtgcga tttcgcgctc
      601 ggcagcgata ccggcggctc ggtgcgggtc cccgcatcgt tcaatggaat ttacgggctg
      661 cggccgaccc acgagcgcat cgagcacgcc ggcgttgccg acatggcacc gagttttgac
      721 gtgccgggct ggttcgccgc aacgcccggc gtattccgca acgtcggcgc ggtgctgctc
      781 gacaaccaac gggtgaccgc ggagatcggg cgcgtcgtgg tgctggaaga tgccttcgcg
      841 caggcggaag agccggtcgc cgatctgctg cgcaccgcgc tcgaattcat gagtgatgat
      901 ttgcccgaga tgctgcatgg caagatcgcg cccgaaggcc tcgatgcctg gcgcgaggcg
      961 tttcgaatcg tgcaggccta tgaaacctgg cagacattcg gcgccttcat cagcgagcac
     1021 aagccggaca tcggcccggg cgtgcgcgag cggatgcaat tcgccgccac cgtgaccaag
     1081 gcgcaggccg atggcgctcg ggccatccag ctcaaggcgc gcgaacacat ccggcagatc
     1141 gccatgccgg gcacaatcct ggcgctgccg acggcaccaa gcgttgcacc cgatatcgac
     1201 atagcgggcg cagagctgga ggaatttcgc gtgcgggcga tgcggctgac ctgcacagcc
     1261 ggtgtctccg gcttgccgca aatgagcatt ccggcgggca cgatcgatgg ctgcccggtc
     1321 ggcctctcct tcatcggctg ggccggcgga gacgaggccc tgctcgatct tgcctgtgaa
     1381 ttatcccgcc actgcggcat ggcggcgtga ccgacagagt ccgttcatcc ctgcgcagtc
     1441 aaaacccgtt cgtccccgcg aaagcgggga tccagagcta aagctgggcc gtcatgttct
     1501 ggattcccgc ttccgcggga attgaacgga caacaacatt cgggcttggt ttcatcgctg
     1561 cagtggatta tgcgttaggc gatgaccgac caatttcttg accgaaaaac catcgccgag
     1621 ctgaccgcgc ggatgtacct cgacacgggc gcggtgcgct tcatgagcga caagccgttc
     1681 atcttcacga gtggctgggc cagcccggtc tacaacgact cgcgctggct gatgtcgttt
     1741 ccggatgtcc gctcgaccct gatggatttc gcggttcaca ccatcgagcg cgacgtcggc
     1801 cgcgacaaga tcgattccgt ggcgggcggc gagactgccg gcattccgtt cgcggcctgg
     1861 gttgcggacc gccttcacct gccgatgcaa tacgtacgca agaaggcgaa aggcttcggc
     1921 cgcggcgccc agatcgaagg ccagctgatt cccggccagc gcgtcctgct ggtggaagat
     1981 ctcgccaccg acggcaagag caaggtcaac ttcatcaacg cgctgcggga agcgggcggc
     2041 aagtgcgaac actgcttcgt gattttcttc tacgacattt atccgcagag caggaaaatc
     2101 ctcggcgacc tcggcgtgac gctgcacgcg ctcaccacct ggagggattt gctggcggtc
     2161 gccaaagcga gcggagaatt cgaaccgaca atgctggccg aggtagagaa atttattcac
     2221 gacccggccg gctggtcgaa ggcgcacggc ggcgcggcgg aagccgcgga gtgaacttgg
     2281 tgtcatgccc ggtcttgtcg cgggcatgac gaggtgcaca aggaggcctg tcatggcgaa
     2341 agcaaaacgc aaggcgaagg caaccagggc aaaagcgaaa aagcgaagga cgaaggtcgc
     2401 cgccagatcc gcgaaacgtg cgcatcgcgc atcgtcaacg cgcacccgca agtcgcaaca
     2461 gttcaccctc agtcatcatc gcgatgagga tttcgaccat ggctt
//
LOCUS       DATDHO010000869         3463 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_390437, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000869 DATDHO010000000
VERSION     DATDHO010000869.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3463
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390437"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..125)
                     /locus_tag="VIY07_17040"
     CDS             complement(<1..125)
                     /locus_tag="VIY07_17040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEY6383495.1"
                     /translation="MGVADKRRAFRALHQSGCFVIPNPWNVGSARYLQGLGFKALA"
     gene            345..605
                     /locus_tag="VIY07_17045"
     CDS             345..605
                     /locus_tag="VIY07_17045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383496.1"
                     /translation="MSSLPIKLFGLALIFAFALASPADAKSRKHKKAFVATTAGYQDW
                     GTNLVRPGPLYFGGVYLGDDPDPNIRFQIMRDISGRFGGDSN"
     gene            732..1913
                     /locus_tag="VIY07_17050"
     CDS             732..1913
                     /locus_tag="VIY07_17050"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEY6383497.1"
                     /translation="MLRTIAAFDRIGEENAFAVLARANALVAQGRDIINLGIGQPDFR
                     TPDFIVEAAVKALRDGHHGYTPANGIPPLREAVAVDLAKRFKVEVSPDSVMIMPGGKP
                     TMFMSILMFGEPGVEIMYPDPGFPIYRSMIEFTGAKPVPVPIREENGFAFSAEETLNL
                     ITPRTRLLIVNSPANPTGGVTPKAEVDKLVAGLEKWPDVAIMSDEIYDHMVYDGETHV
                     CLLSYHSIRDRLILLNGWSKTYAMTGWRLGYAVWPGKLYDYARKLAVNLHSCVNASAQ
                     YAGLAALKGPQQEVHKMVAEFDKRRKVVVEGLKELPGVSCATPKGAFYAFPNVKRTGW
                     KAKALASALLEDAGVAIIGGPDFGILGEGYVRVSYANSTENILKALDRMGDFLSSRKA
                     A"
     gene            1937..3187
                     /locus_tag="VIY07_17055"
     CDS             1937..3187
                     /locus_tag="VIY07_17055"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6383498.1"
                     /translation="MLDRTSADRGLSEEQRMMRQSCRDFVDEVVLPFIKQNWQREWSM
                     VPEDRLPPRILEEAEKIGIRTLGVPEEYGGVELEKGAEVRTFAMIAEEIARGDSGLAD
                     KLVQNWKVSVLLRQFAPKHLQEKWFKRLVADPQFLMAHCLTEPRGASDRWLPYNVPEA
                     AMQTKAVRTNGGWIINGRKQFISNGYDAGLYVVYANTNPKVGMLQGTSSFLVPRETKG
                     FSVARCNETLGCRFMNNGEMVFEDMFVPDDHLLVENTALGSAGVYFRPGKIIQAAKNL
                     GVGVRAFEATADYVQNYVQGGRILIKHQAVALRLADMATRIEAVRALLNRASQAVDDN
                     APDAEVLVNMAKMFASEEIMKVAQHAVELHGGNGIMLDFGIEKVLRDAVIFLHMDATA
                     DISKLKIIKNMFPDTAGKYAGPED"
     gene            complement(3195..>3463)
                     /locus_tag="VIY07_17060"
     CDS             complement(3195..>3463)
                     /locus_tag="VIY07_17060"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEY6383499.1"
                     /translation="GLSALERHSLFENLLQAVVQGGLAGSLPIYLFAHAVIALGGGRA
                     ATFPALVPVFGVVIGFLALGVVPTLAQFVGMLIVLVGFQFALRR"
BASE COUNT          748 a         1000 c         1045 g          670 t
ORIGIN      
        1 gccaaagcct tgaagccgag cccctgcagg tagcgggcgc tgccgacatt ccatggattg
       61 ggaatgacaa agcagccact ctgatgcaac gcacggaacg cgcggcgttt gtcagcgaca
      121 cccatgaccg aaatccttga aaaggggcga gaggtcgaca atgcccccaa cacgcagacg
      181 attgcaaatc ggccagcgtg gcgcgaagtc ccatagggca gcgtaaaccc cccggacgcc
      241 tcgatattcc gacaccgaga tgtgatcgaa ttgatgcggc attttctttg cgctccggtg
      301 tctattggct aaatggctcg catgcagcgc aatcgaggat ggccatgtcg tcacttccaa
      361 ttaaactatt cggtctcgca ttgatttttg ctttcgcgct ggcctcgcca gccgatgcta
      421 aatcgcgcaa gcacaagaag gcctttgtag ccacgactgc cggttatcag gattggggta
      481 cgaacctggt tcgtccgggt ccactctact ttggcggcgt ctaccttggc gacgatcccg
      541 acccgaacat tcgtttccag atcatgcgcg atatcagcgg aaggtttggc ggcgacagca
      601 actagccgcc ccttttcgac caaggttctg gtgccgtttg atttttgctg tctgatcggc
      661 tgaagtgccg cctccacgat gaggcgttcc gcgcggacgt gccgcccggg ggcctgggga
      721 ggacagcagt catgcttcgt acaatcgcgg ccttcgaccg catcggcgag gaaaacgcgt
      781 tcgcggtgct cgcccgcgcg aatgccttgg tcgcgcaggg ccgcgacatc atcaatcttg
      841 gtatcggcca acctgatttc aggacgccgg atttcatcgt cgaagcggcg gtcaaggccc
      901 tccgcgacgg ccaccatggg tatacccccg ccaacggtat tccacccctg cgagaggcgg
      961 ttgcggttga cctcgcgaag cgcttcaagg tcgaggtctc tcccgacagc gtgatgatca
     1021 tgcccggtgg caagccgacc atgttcatgt cgatcctgat gttcggggaa ccgggcgtgg
     1081 aaatcatgta tcccgatccc gggttcccga tctatcgctc gatgatcgaa ttcaccgggg
     1141 ccaagccggt gccggtgccg atccgcgagg agaatggctt cgccttttca gccgaggaaa
     1201 cgctgaatct gatcacgccc cgtacgcggc ttctgatcgt gaattcgccg gccaatccga
     1261 ccgggggcgt gacgccaaag gccgaagtcg acaagctcgt ggcgggattg gagaaatggc
     1321 cggacgtggc catcatgtcc gacgagattt acgaccacat ggtctatgac ggcgagacgc
     1381 acgtctgcct gttgtcctat cattcaatcc gtgatcgcct gatcctgctc aatgggtggt
     1441 caaagaccta cgccatgacg ggctggcgcc tgggctatgc ggtatggccg ggcaagcttt
     1501 atgactatgc gcgcaagctc gcagtaaacc tgcattcatg cgtcaatgcc tcggcacaat
     1561 atgccgggct cgccgctctc aaaggtccgc agcaagaagt gcacaaaatg gtcgccgaat
     1621 tcgacaagcg gcgaaaggtc gtggtcgaag gactcaagga gttgccaggc gtctcctgtg
     1681 ccactcccaa gggtgcattt tatgcttttc ccaacgtgaa acgtaccgga tggaaggcaa
     1741 aggcgctcgc atcggcgctg ctggaggatg cgggggttgc catcatcgga ggtccggatt
     1801 tcggaattct gggcgaaggt tatgtgcggg tgtcctacgc caattcgacg gaaaacattc
     1861 tgaaggcgct cgaccgcatg ggggactttc tgtcgagcag aaaagccgcg tagccagcgt
     1921 caggaaggaa gctgtcatgc tcgatcgcac ctccgcagac cggggtctgt ccgaagagca
     1981 acgaatgatg cggcaaagct gccgggattt cgtcgatgaa gttgtgcttc cgttcataaa
     2041 gcagaattgg caacgcgaat ggtcgatggt gccggaagat cggcttccgc ctcgcattct
     2101 tgaagaagcc gagaagatcg gcattcgcac cttgggcgtg ccggaagagt acggtggggt
     2161 cgagctcgaa aagggtgccg aagtccgcac gttcgcgatg atcgctgagg aaatcgcgcg
     2221 cggcgattca gggctcgccg acaagctcgt gcaaaactgg aaagtatcgg tcctcctgcg
     2281 ccaattcgcc ccgaagcacc tgcaggaaaa atggttcaaa cgccttgtcg ccgacccgca
     2341 gtttctgatg gcgcactgtc ttacggagcc gcgcggcgct tccgaccgtt ggctgcccta
     2401 caacgtgccg gaagcggcca tgcagaccaa ggccgtcaga acaaacggcg gatggatcat
     2461 caacggccgc aagcagttta tctccaacgg ctatgacgcc ggcctttatg tcgtttacgc
     2521 caacacgaac ccaaaagttg gaatgttgca gggcacctca tcattcttgg tgccacgcga
     2581 gaccaagggc ttctcggtcg cgcgctgcaa cgaaacgctc ggctgccgtt tcatgaacaa
     2641 cggcgaaatg gtgttcgagg atatgttcgt tcccgacgac cacctgctgg tggagaacac
     2701 cgcgctgggc tccgccggag tctatttccg ccccgggaag atcatccagg ctgcgaagaa
     2761 tctcggcgtg ggagtgcgcg cattcgaggc tacggctgac tacgtgcaga actacgtgca
     2821 agggggccgc atcctgatca agcatcaggc ggtggccctt cggctcgccg atatggcgac
     2881 gcgcattgag gcagtccggg ccttgctcaa ccgcgcatct caggccgtgg acgacaatgc
     2941 gccggatgcc gaggttctcg tcaacatggc gaaaatgttc gcctctgaag agatcatgaa
     3001 ggtggcgcag cacgcggtcg agctgcatgg cggcaacggc atcatgctgg acttcggcat
     3061 agaaaaagtg ctgcgcgacg cagtaatctt cctgcacatg gatgcgactg ccgatatctc
     3121 caaattgaag atcatcaaga atatgttccc ggacaccgcc gggaaatatg cggggccgga
     3181 agactagcgg gcattcaacg ccgcagcgcg aactggaatc cgactagaac aatcagcatt
     3241 ccgacaaatt gcgccagggt cggcacaacg ccaagcgcaa ggaaaccgat cacgacaccg
     3301 aacaccggta ccaaagctgg gaaggttgcg gcacggccgc cgccgagcgc gattacggcg
     3361 tgggcgaaga ggtagattgg caacgatccg gcgaggccgc cctgcacgac ggcctgcaat
     3421 agattttcga ataagctgtg ccgttccagt gcactcagcc cat
//
LOCUS       DATDHO010000870         3670 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_341567, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000870 DATDHO010000000
VERSION     DATDHO010000870.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3670
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_341567"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..509)
                     /locus_tag="VIY07_17065"
     CDS             complement(<1..509)
                     /locus_tag="VIY07_17065"
                     /inference="COORDINATES: protein motif:HMM:NF040245.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEY6383500.1"
                     /translation="MNAEVRAIKTPAEQALSAAFAAARGKLPGSGVVTALRDEAFHRF
                     DAHGLPHRRVEEWKYTDLRALMREAKPLAEPAARTGVVTGLVGVEAGQVAIVNGRYEP
                     GWSNFNASDAGITLSELFAFAAEEKTYRLGDVPGKDDIAFWLNTAFMTGGVALRVKKN
                     ARQPVHIAHV"
     gene            complement(509..1264)
                     /gene="sufC"
                     /locus_tag="VIY07_17070"
     CDS             complement(509..1264)
                     /gene="sufC"
                     /locus_tag="VIY07_17070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEY6383501.1"
                     /translation="MAFLEVKNLHVEVEDKKILNGLTLSVEKGQVAAIMGPNGSGKST
                     LAYVLAGKDNYKVTEGDVLLNGESILEMAPDERAARGVFLAFQYPVEVPGVATMTFLR
                     TALNAQRKKRGEPEVSTPEFMKLVRDTASRLGISQEMLRRAVNVGFSGGEKKRNEILQ
                     MAVLQPELAVLDETDSGLDIDALKIVADGVNRLRSPARSIVVITHYQRLLNYIVPDVV
                     HVLAKGRVVKSGGKELALELEAKGYTQFQGEAA"
     gene            complement(1269..2792)
                     /gene="sufB"
                     /locus_tag="VIY07_17075"
     CDS             complement(1269..2792)
                     /gene="sufB"
                     /locus_tag="VIY07_17075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006012385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEY6383502.1"
                     /translation="MPAVQETVDQVRRIDVDQYKYGFETKIETEKAPKGLSEDTIRFI
                     SSKKNEPEWMLASRLEAYRRWLTMREPTWARVNYPTIDYQNIYYYAAPKAFKAPKSLA
                     DVDPEILRTYEKLGIPLKEQEILAGVRKQGEPSALDDEETGGDFRSGRVAVDAVFDSV
                     SVATTFKEELKKAGVIFMPISEAIREHPELVKKYLGSVVPTSDNFFATLNSAVFSDGS
                     FVYVPEGVRCPMELSTYFRINERSTGQFERTLIIADKGSYVSYLEGCTAPMRDENQLH
                     AAVVELVALDDAEIKYSTVQNWYPGDAEGRGGIFNFVTKRGDCRGKNSKISWTQVETG
                     SAITWKYPSCILRGDNSRGEFYSIAISNGHQQVDSGTKMLHLGKNTVSRIISKGIAAG
                     KSNNTYRGLVSAHRKAKGARNFTNCDSLLIGAHCGAHTVPYIEAKNSSAIFEHEATTS
                     KISEDMLFYCRQRGMSAEEATALVVNGFVKDVLQQLPMEFAVEAQKLISISLEGSVG"
     gene            complement(2910..>3670)
                     /locus_tag="VIY07_17080"
     CDS             complement(2910..>3670)
                     /locus_tag="VIY07_17080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HEY6383503.1"
                     /translation="EEAIRKATRPLVSVMLANNETGVVQPIPQIAKIVHAASGVLHVD
                     AVQCPGRIDCDIAQLGADLVSISSHKIGGPQGAGALVRRGDIHVAEPLIRGGGQERGQ
                     RAGTENVPAIAGFGAAAAAAKLTDAGRMAAQRDRLETGLKAVTPEAVIFGSNARRLPN
                     TSAFAVPGIKAETAIIAFDLNGIAVSSGSACSSGKVQASHVLAAMGADSALIRGGVRV
                     SLGWSTADADVEHFLETWNVLAGSLLKERSGIAA"
BASE COUNT          678 a         1158 c         1068 g          766 t
ORIGIN      
        1 acatgggcga tatgcaccgg ctgacgcgca ttctttttca cgcgcagcgc gacaccaccg
       61 gtcatgaagg cggtgttcaa ccagaatgca atatcgtctt tgcccgggac gtctccgaga
      121 cggtaagtct tctcctcggc cgcaaaggcg aaaagctcgc taagcgtgat gcccgcatcg
      181 ctcgcgttga aattgctcca acccggttcg taacgcccgt tgacaatggc gacttgacca
      241 gcctcaacac ccacgagccc cgtcaccacc cctgttcgcg cagcgggttc cgccagcggc
      301 ttggcttcgc gcatgagcgc gcgcaaatca gtgtatttcc attcctcgac ccgccgatgc
      361 ggcaagccat gcgcgtcaaa gcggtggaag gcctcgtcgc gcagtgcagt gacaacgcca
      421 ctgcctggca gcttgcctcg cgcagccgca aacgcggcgc taagcgcctg ctcggccggc
      481 gtcttgatgg cgcgcacttc tgcgttcatc aggcggcctc gccctggaat tgggtatagc
      541 ccttggcctc aagctcaagc gcgagctcct tgccgccgga tttcacgacc cgccccttgg
      601 ccagcacatg caccacatcc ggcacgatgt aattgagcag tcgttgatag tgggtaatca
      661 cgacaatcga gcgcgcagga gatcgcaggc ggttgacgcc atctgccacg atcttgagcg
      721 cgtcgatatc aaggcctgaa tctgtctcgt cgagcaccgc gagttccggc tgcagcacgg
      781 ccatttgcaa aatctcgttg cgcttcttct ccccgcccga gaagccaacg ttaacggcgc
      841 ggcggagcat ttcctggctg atcccgagcc ggctcgcggt atcgcgcaca agtttcatga
      901 attcaggcgt ggagacctcc ggctcgcccc gcttctttcg ctgagcgttg agcgcggtgc
      961 gcaggaacgt catcgtcgcg acacccggca cctcgacggg atattgaaag gcgaggaaca
     1021 cgcccctggc ggcgcgctcg tcaggcgcca tctccaggat gctttcgccg ttgagcagga
     1081 cgtcgccctc ggtgaccttg tagttgtcct tgcccgcgag cacataggcg agcgtcgact
     1141 tgccggagcc gttcggcccc atgatcgcgg cgacctgccc cttctcgaca gacagcgtca
     1201 gtccgttgag gatcttcttg tcctcgacct cgacatgcag atttttgact tccagaaaag
     1261 ccataagatt aacccacgct tccttccaag ctgattgaaa tgagtttctg cgcctcgacg
     1321 gcgaattcca tcggcagctg ctgcagcaca tccttcacga aaccgttgac cacaagcgcg
     1381 gtggcctctt ccgccgacat tccgcgctga cggcaataga acagcatgtc ctcggaaatc
     1441 ttcgacgtgg tcgcctcgtg ctcaaagatc gccgatgaat tcttcgcctc gatatatggc
     1501 acggtatgcg caccgcagtg ggcgccgatg aggagcgagt cgcagtttgt gaaattgcgc
     1561 gcgcccttgg ctttgcgatg tgccgacaca aggccgcgat aggtattgtt ggatttcccc
     1621 gcggcgatgc ccttggagat gatgcgactc acggtgttct tgccgagatg cagcatcttg
     1681 gtgccgctgt cgacctgctg gtgaccgttc gagatggcaa tcgagtagaa ctcgccacgc
     1741 gaattgtcgc cgcgcaggat gcagctcgga tatttccagg tgatcgccga gccggtctcc
     1801 acctgtgtcc aggagatctt agagttcttg ccgcggcagt cgccgcgctt ggtgacgaag
     1861 ttgaagatgc cgcccctgcc ttcggcatcg cccggatacc agttctgcac cgtcgaatac
     1921 ttgatctcgg catcgtcgag cgcgacgagc tcgacgaccg ccgcgtgcag ctggttctcg
     1981 tcgcgcatcg gcgccgtgca gccttcgaga tagctcacat aggagccctt gtccgcaatg
     2041 atcagcgtgc gctcgaactg gccggtcgac ctttcgttga tccggaaata tgtggacagt
     2101 tccatcgggc agcgcacgcc ctccggcacg tagacgaatg agccgtcgga aaacaccgcc
     2161 gaattgagcg tcgcgaagaa gttgtccgac gtcggcacca ccgagcccag atactttttc
     2221 accagttcgg gatgctctcg gatcgcctcg gaaatcggca tgaagatcac gccggccttt
     2281 ttcagttcct ccttgaaggt ggtggcgacc gaaacggaat cgaacacggc gtcgaccgcg
     2341 acgcggccgg agcggaaatc gccgccggtc tcctcgtcat caagcgcgct cggctcgccc
     2401 tgcttgcgca cgccggcgag gatctcctgc tctttgagcg gaatgccaag cttctcgtag
     2461 gtgcgaagaa tctcgggatc gacatcagcg agcgactttg gcgctttgaa cgcctttggc
     2521 gccgcgtagt agtaaatgtt ctggtagtcg attgtcggat agttcacgcg cgcccaggtc
     2581 ggctcgcgca tggtcagcca gcgccgatag gcctccaggc gcgatgccag catccactcc
     2641 ggctcgttct tcttgctcga gataaaacgg atcgtgtctt ccgaaagacc tttgggggcc
     2701 ttctcggttt cgatcttggt ctcgaagcca tacttgtatt gatcaacgtc gatgcggcgg
     2761 acctgatcga cggtctcttg tactgccggc attcttccct ccgctcacgg tttcaaggac
     2821 cgcgggttgg atttgtcggt tatggtgttc gcgctatccc ggtgcgctgg ttcccatggt
     2881 tgatggttgc aagtcacgct tgagccgcct caggcggcaa tgccgcttct ctccttaagt
     2941 agtgatccag caagaacatt ccaagtttca aggaaatgtt cgacgtccgc gtccgcggtg
     3001 ctccagccaa gactaacgcg cacgccgcca cgaatgagcg ccgaatcagc gcccatcgca
     3061 gccaaaacat gcgaggcctg aacctttccc gaggagcatg cggaacctga cgaaacggct
     3121 atgccattga ggtcaaaggc gattatggca gtttccgcct ttatgccggg aaccgcgaat
     3181 gcgctcgtgt tggggagacg gcgcgcattt gatccaaaaa tcacggcttc gggcgtaaca
     3241 gccttcagac ctgtttcgag ccggtcgcgc tgcgctgcca tccgtccagc gtctgtcaat
     3301 ttcgctgcag cggctgcggc accgaagccc gctatcgcag gcacgttttc ggttcccgcc
     3361 cgctggccgc gctcctgccc cccgcccctg atcagcggtt cggcgacatg gatgtcgccg
     3421 cggcgcacaa gggcgccggc gccctgcggc ccgccaattt tgtgcgagga aatgctgacg
     3481 agatcggcac caagctgcgc aatgtcgcag tcaatccgtc cggggcactg cacagcatcg
     3541 acgtgcagca cgcccgaggc cgcgtgaacg attttcgcaa tctgagggat aggctggacg
     3601 acgccggttt cgttgttagc gagcatgacc gataccagcg gccgcgtggc cttccggatg
     3661 gcctcttcga
//
LOCUS       DATDHO010000871         3486 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_440251, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000871 DATDHO010000000
VERSION     DATDHO010000871.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3486
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440251"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..213
                     /locus_tag="VIY07_17085"
     CDS             <1..213
                     /locus_tag="VIY07_17085"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrmO family methyltransferase"
                     /protein_id="HEY6383504.1"
                     /translation="QRGTFALRSPARPNPVAMSVVKLLRVDGNRLSVVGLDCLDGTRL
                     LDIKPYFASTDSVPEAIVGWHECKEE"
     gene            513..1238
                     /locus_tag="VIY07_17090"
     CDS             513..1238
                     /locus_tag="VIY07_17090"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6383505.1"
                     /translation="MSKPVRIAALIGAVALSCGTASAESLFAFLAPPSPTQVAPQTAA
                     PALDDERDEAQLDPRLKRQIVGYPSKEAPGTIIIDTPHTFLYYVLGNGRAIRYGIGVG
                     REGFTWSGVKSIERKAEWPDWYPPPEMVARQPYLPRMTSGGPGNPLGARAMYIAGTQY
                     RIHGTNAPSTIGRHVSSGCIRLTNENVIDLYNRVQIGAKVIVLPQTTVARSQQALLSN
                     AYAPQPQSPAQATWSGIRPSGRY"
     gene            1408..2331
                     /locus_tag="VIY07_17095"
     CDS             1408..2331
                     /locus_tag="VIY07_17095"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEY6383506.1"
                     /translation="MRIAAMAAGAVGGYFGARMAAAGHDVFFIARGAQRDAIAKNGLK
                     IESVLGDLHLPKPNVTDDPATVGPVDIVLFAVKLWDTEKAAEQARPLVGQTTRVITLQ
                     NGIDSVERIAPILGAEQTVGGAAYIATVIAAPGVIKQTSQFAMMRFGRADKKPDATLK
                     AFVDAGKAAKVDLDITPDIERELWQKFIFLTAMSGSTAGLRSPIGPIRDDPELRAFVR
                     ALMDEAFAVGKARGVSLDAAYLEERMNFLAGKIEPGMKASMAHDLERGNRLELDWLSG
                     KVRALGRELGIPTPASDTVYTVLKLHRMGSR"
     gene            2636..3391
                     /locus_tag="VIY07_17100"
     CDS             2636..3391
                     /locus_tag="VIY07_17100"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY6383507.1"
                     /translation="MHTAADLKALEQHPFVARLLQHVDLTHSDLSSLNAVIDGEVSIS
                     RRRDLIVDGFEYRKLSFVKDGYAVRYKLLRNGKRQILNVVLPGDIVGIPASFLDRAAY
                     SVTAVTDVTMTVCALDAYVQLCYRRPQFGLALSWIAVQEATTYAEHIIDVGRRTPIER
                     LSHFLLELHARLHAIGRAGKTRFELPFSQEVMADVLGMSLPHLNRMMQRLRAEKMIAG
                     SERQIEFLDPRAIRTLAQYQPQELAPIPLPTSA"
BASE COUNT          690 a         1083 c         1051 g          662 t
ORIGIN      
        1 cagcgcggca cattcgcact gcggtctcct gccaggccaa atcctgttgc gatgagcgtc
       61 gtcaaattgc tgcgcgtcga tggtaaccgc ctatcggtcg tcgggctgga ttgcctggac
      121 gggacgcggc ttctcgacat caagccctat ttcgcgtcca cagacagcgt cccggaagcc
      181 attgttggct ggcacgaatg caaagaagag tagcaattcc tcggtctttc ccggccatgg
      241 ccgggcatag ctgtctgaag gacggcgtac tttcgcccgc ctatgtcatg gccatccacg
      301 tctttgactt tgtacggctg cgaagcaaga cgtggatgcc ggcataagcg ggcatgacgg
      361 agcgtagggc agctggaaga aactaaatcc gatttggacc aaatcgttcc tgacggctcg
      421 ctataaaacg cgaaccacct cgcggaacca attgagcctc tcggcgattt tcacgaccga
      481 gacgggaggg agggaaaacg ccgaggggtg tcatgtcgaa gccagtcagg attgccgcgc
      541 tgatcggcgc cgtcgcgctc tcatgcggta ccgcaagcgc cgagtctctc ttcgcctttc
      601 tcgctcctcc ttctccgacc caagtcgctc cgcaaaccgc cgcaccggca ctggatgacg
      661 agcgtgacga agcgcagctc gatccgcgcc tgaaaaggca gatcgtcggc tatcccagca
      721 aggaagcgcc cggcaccatc atcatcgata cgccgcacac ctttctttat tacgttctcg
      781 gcaacggaag ggcgatccgc tacggcatcg gggtcggccg cgaaggcttc acctggtcgg
      841 gcgtgaaatc gatcgagcgt aaggccgagt ggcctgactg gtatccgccg cccgagatgg
      901 ttgcgcggca accttatctg ccgcgcatga cttccggcgg ccctggcaat ccgttgggcg
      961 cgcgcgcgat gtatatcgcc ggcacgcaat atcgcatcca tggcaccaac gcgccgtcca
     1021 cgatcggccg gcacgtatcg agcggttgca ttcgtctcac gaatgaaaac gtgatcgacc
     1081 tgtacaatcg cgtgcagatc ggagcgaaag tgatcgtgct gccgcaaacc accgtcgcaa
     1141 gatcgcaaca ggcgttgctg tccaatgctt atgcgccgca gccgcaaagc cccgcgcagg
     1201 cgacgtggag cggcattcgg ccctccggcc gctattagta tcttcgcaag ctcaccgaaa
     1261 tgacccggcc tcgcgccggg ctttttgcgc gcttgtgtgt tgccagggac ggtggctaaa
     1321 cccattcacc cgttcattcc cgcgtaagcg ggaatccgcc cagggtcccc gcttttgtgg
     1381 ggacgaacgg tggataggag aaattacatg cgtattgcag ccatggctgc cggagcggtg
     1441 ggcggttatt tcggcgcgcg gatggcggcc gcgggccacg acgtgttttt catcgcccgc
     1501 ggcgcccagc gcgatgcgat cgcgaagaac ggattgaaaa tcgaaagcgt gctgggcgac
     1561 ctgcatctgc cgaagccgaa tgtcaccgac gacccggcaa cggtcggtcc ggtcgatatc
     1621 gtcctgttcg cagtcaagct atgggacacg gagaaggcgg ctgaacaggc acggccgctg
     1681 gttggccaga cgacgcgcgt cattactttg cagaacggca tcgacagcgt ggagcgcatc
     1741 gctcccattc tgggcgccga gcagaccgtg gggggagccg cctatatcgc gaccgtgatc
     1801 gccgctcccg gcgtcatcaa gcagaccagc cagtttgcga tgatgcgttt cggccgcgcc
     1861 gacaagaaac ccgatgccac actgaaggct tttgtcgatg ccgggaaagc cgccaaggtc
     1921 gatctcgaca ttacccccga tatcgagcgc gagttgtggc agaagttcat tttcctcacg
     1981 gccatgtcgg gctcgacagc gggcctgcgc tcgcccattg gcccgatccg cgatgatccc
     2041 gagctgcgcg catttgtccg cgcactcatg gacgaagctt tcgccgtcgg gaaagccagg
     2101 ggcgtttcgc tcgatgccgc ctatctcgag gagcgcatga atttccttgc cggcaagatc
     2161 gaacccggca tgaaggcttc gatggcgcac gatctcgaac gcggcaacag gctcgagctc
     2221 gattggctgt ccggcaaggt ccgcgccctc ggccgcgagc tgggcatccc gacccccgcg
     2281 agcgacaccg tctataccgt gctcaagctg caccggatgg gctcgcgctg aatgcgcata
     2341 aaagaagccc cgacgcaggg ccggggcttc ctgtgcgtaa cggctggagg ggcaacctaa
     2401 ccagccatcc cggcacatcg ttgttcaaac aagcggcctc ggccaggcac ggacgacagc
     2461 caaaaaatgg ccgcacaacc cgcgcggcca ttgtgaggtc agtagcttca catccactcc
     2521 ctctcagagg gggaagagtg gcgtgcttat tcgaccggtt tttgtgaaag agggcttttg
     2581 ccaggattat tgattcagat taatgaagaa gggcagctcg tgtctcagga ggaccatgca
     2641 caccgccgcg gatctcaaag ccctggagca acacccgttc gtcgcccggc tgttgcaaca
     2701 tgtcgatttg acacatagcg atttgagtag cctgaacgcc gtcatcgatg gcgaagtatc
     2761 catctcgcgg aggcgcgatc tcattgtcga cggcttcgaa tatcgcaagc tctctttcgt
     2821 aaaggacggc tacgctgtcc gctacaagct gttgcgcaac ggcaagcggc agatcctcaa
     2881 cgtcgtcctg cccggagaca tcgtgggcat cccggccagt ttcctcgacc gcgccgccta
     2941 ttcggtgacc gccgtcaccg atgtcacgat gaccgtgtgc gcgctcgatg cctacgtgca
     3001 actctgttat cggcgtccgc aattcggcct ggctctgagc tggatcgccg ttcaggaagc
     3061 gacgacttat gccgagcaca tcatcgacgt cggccgccgc acgccgattg agcggctctc
     3121 gcattttctt ctggagctgc acgcgcgcct gcacgcgatc ggacgcgcgg gaaagacccg
     3181 tttcgagttg ccgttctcgc aggaggtgat ggctgacgtg ctcggcatga gccttcccca
     3241 tctcaaccgg atgatgcaac ggttgcgagc ggagaaaatg atcgccggca gcgaaaggca
     3301 gattgaattt ctcgatccgc gcgccattcg gacgcttgcg caataccagc cgcaggagct
     3361 cgcaccgatt ccgctgccaa cgtcggcttg agtctattgg ttcgacgcgc gcaatcgacg
     3421 gggcgatggc agcatagccg ctatgacaat ggcgccgccc gcagcaagaa ctgccgcaat
     3481 gagcat
//
LOCUS       DATDHO010000872        15448 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_90105, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000872 DATDHO010000000
VERSION     DATDHO010000872.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 15448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15448
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90105"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..619)
                     /locus_tag="VIY07_17105"
     CDS             complement(<1..619)
                     /locus_tag="VIY07_17105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HEY6383508.1"
                     /translation="MARNLITDIPGVRVGHAGDPKLGSGVTAIIFDEAVIASVDVRGG
                     GPGTRETALLDPAHTVESIDAIVLSGGSAFGLDAASGVQAWLREQGRGFRVREARVPI
                     VSGAILFDLLAGGDKNWGRYPPYRELGYEATRAAGNDFALGSAGAGLGATTVNLKGGI
                     GSASAVTRSGIAVGALAAANAAGSMTIGDGPHFWAAPFEQGKEFGG"
     gene            720..1454
                     /locus_tag="VIY07_17110"
     CDS             720..1454
                     /locus_tag="VIY07_17110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HEY6383509.1"
                     /translation="MKGDVTYLAAVLAGLVSFLSPCVLPLVPPYLAFLAGTSLERFAD
                     KEAEPRVKRETVAAAVLFVLGFSTVFVALGASASVIGSLVRAYSGPLATIAGIVIIVM
                     GLHFLGLTPIALLHRQKRLDVAKPVGLWGAYVIGLAFAFGWTPCIGPILAAILAVAAS
                     EQTVSKGASLLAVYSLGLGIPFVVAAFAIEPFAAFLSRFRNYLHRVEQVMGALLVITG
                     IAFLTGSINQVSVWLLETFPILGKIG"
     gene            complement(1502..2644)
                     /locus_tag="VIY07_17115"
     CDS             complement(1502..2644)
                     /locus_tag="VIY07_17115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEY6383510.1"
                     /translation="MKKITTFGFALSIAIAAAQTAGAQIKFGVGGPITGPSAATGAQM
                     KNGVDQAAADINAAGGILGQKIVVSYGDDASDPKQGVSVANKFTGDGVKFVIGHYNSG
                     VTIPSSEVYQENGVLQITPASTNPTVTERKMWNIFRVCGRDDQQGQVAGEYIAKHFKG
                     KKIAIVHDKTTYGKGLADETKKTINKGGLKEVLYEGVNTGEKDFSALVSKIKQSGADL
                     IYWGGLYTEAGLIVRQMRDQGVKAPMMGGDGITSDEFASIGGPGVEGTLMTYGPDPRN
                     RPDAKKVVEEFRAKKFEPEAYTLYSYAGVQIIKQAAEAAKSLDPKKVAEKMHSGMPFK
                     TVLGDISYDKKGDITKLDYVMYIWKKDPSGKINYVECPGSDCSKVK"
     gene            complement(2698..3048)
                     /locus_tag="VIY07_17120"
     CDS             complement(2698..3048)
                     /locus_tag="VIY07_17120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383511.1"
                     /translation="MPEFLYEEGSFGVFVLVTIILGGGAAILAGRAIAATWRPWWQVV
                     AYGFVLAGAVRFIHFSLYGGTFLSLHYYLVDSVFCIVFGYLGFKAARARQMITQYRWL
                     NESDGLMRWRRRFP"
     gene            complement(3075..3800)
                     /locus_tag="VIY07_17125"
     CDS             complement(3075..3800)
                     /locus_tag="VIY07_17125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383512.1"
                     /translation="MTTPLLTVRGVKTFYGRVMALKGVDLEVNEGEIVTLIGANGAGK
                     STLMMTVCGNPRAREGKIYFAGHDITRLPTHEIARLKLAQAPEGRRIFSRMTVLENLQ
                     MGASTADPSQFKRDLDHVLMLFPRLQQRIGQRGGTLSGGEQQMLAIARALMAQPRLLL
                     LDEPSLGLAPLVVRQIFDAIKRLNAEGGLTVFLVEQNAYHALKLAHRAYVMVNGFITL
                     SGTGRELLEHPEIKSAYLEGGRH"
     gene            complement(3868..4776)
                     /locus_tag="VIY07_17130"
     CDS             complement(3868..4776)
                     /locus_tag="VIY07_17130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383513.1"
                     /translation="MARTGDILLQVERLTMRFGGLVAVEDLSFSARQGDITALIGPNG
                     AGKTTVFNCITGFYKPSEGRIALRHGDNAAWDWLEALTDSGERSIKRTGNGLYLLERM
                     PDYLVAQQARIARTFQNIRLFPGMTVLENLLVAQHNPLMLASGYTLLGVLGFPSFAKA
                     ERGAIEKAREWLDRVGLLTRADDAAGDLPYGAQRRLEIARAMCTDPVLLCLDEPAAGL
                     NPRESAELNTLLLAIRERYDISILLIEHDMSVVMEISDHVVVLDYGVKIADGAPAEIR
                     DNPKVIAAYLGVADQDVAKVEAEVGL"
     gene            complement(4776..6143)
                     /gene="livM"
                     /locus_tag="VIY07_17135"
     CDS             complement(4776..6143)
                     /gene="livM"
                     /locus_tag="VIY07_17135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009494113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivM"
                     /protein_id="HEY6383514.1"
                     /translation="MASGAPAKRVDTARALRDAGLTALLAFGLFLPLVGFETVTDVRN
                     DLILVTRWPLLFAIVAIAGLGRLAYSLAIEPWLQQRAMRPSAEPAPWRRHVASWIIPF
                     ALGFVILYPAIVIATAGYGRAVKWIDNFGIQVLIYVMLGWGLNIVVGLAGLLDLGYVA
                     FYAVGAYSYALLAKTFGFSFWILLPLAGILAAFWGVLLGFPVLRLRGDYLAIVTLAFG
                     EIIRIVLINWVDLTNGYAGITGIPRPTFFGIPFNAEESGFAAVFGLEFSPIYRTIFLY
                     YLILALALLTAFVTVRLRRLPVGRAWEALREDEIACRSLGINTTNTKLTAFAMGAMFA
                     GFAGSFFAARQGFISPDSFTFLESATILSIVVLGGMGSQIGVAIAAIVMIGGIEIMRE
                     LDFLKLLFGSTFDPTQYRMLLFGFAMVLIMIWRPRGLIATRDPSIVLKERKTIAKDLV
                     KEGRG"
     gene            complement(6145..7062)
                     /locus_tag="VIY07_17140"
     CDS             complement(6145..7062)
                     /locus_tag="VIY07_17140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006471258.1"
                     /note="LivHMGF is the membrane component of the LIV-I/LS
                     branched-chain amino acid transporter; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease LivH"
                     /protein_id="HEY6383515.1"
                     /translation="MEVFLQQLINGITLGSIYGLIAIGYTMVFGIIGMVNFAHGDVFM
                     VSVFIALVAFLLLSSVLGISSIALALFLILIVAMLFTSLVNWTIERLAYRPLRGSFRL
                     APLISAIGMSIFLSNFVQVTQGPRNKSIPPMVQGEFVLFTQNDYPVTLSLKQLIIWLV
                     TAILLVCFWYLVTKTRLGRAQRACEQDQKMAALVGVDVDRTISMTFVIAAALAAVAGT
                     MYLMYYGVVSFADGFVPGVKAFTAAVLGGIGSLPGAVIGGILIGLIETMWSAYFSIDY
                     KDVAAFSVLAITLIFLPQGLFGRPDVEKV"
     gene            7505..7660
                     /locus_tag="VIY07_17145"
     CDS             7505..7660
                     /locus_tag="VIY07_17145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383516.1"
                     /translation="MNQNPNQKPGQQQQGGQQQGGQQGGQQKPGQQQQGGQREKPGQQ
                     GGQQQDR"
     gene            7767..8657
                     /locus_tag="VIY07_17150"
     CDS             7767..8657
                     /locus_tag="VIY07_17150"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY6383517.1"
                     /translation="MGVSALPLFHLYGDPPDDSAFDFIHIETIASRSSIHDWTIRAHR
                     HRNLFQVLLIEKGGGEMSFETATARFSAPAVILVPATTAHGFRFTPQVTDGWVVSFTE
                     DVADALGDQSGEALARLKAVGSQPVLPLANMAEARRLSTLCGELYEEGSLAREGYRLA
                     MRGLLALIAIEVVRLAVSRARSGAVTLLRSDPRVDELRRLVDEHFRKERLISFYAEKL
                     AMTSDRLNDHVKRATGVTAGHLIRQRVLTEAKRQLVFTNQAIHEIAYDLAFSDPSHFT
                     RFFRKQTGTTPQAFRDGRGG"
     gene            complement(8660..9463)
                     /locus_tag="VIY07_17155"
     CDS             complement(8660..9463)
                     /locus_tag="VIY07_17155"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383518.1"
                     /translation="MPGQGLAIVGLGAFAFAAIEGSHRGWTSPTIISIAGVAVLALSL
                     FVWVEARTPGPLLPLEFLRRPVFSATIAIAGLMTFGMYALLFIMPLYFQTMRGASPLT
                     AGLELLPMPISFFLVSQVVCYLNNQLGPRIVMTAGMTCMGSVGALALAFINGNTSVFF
                     TELALLIVGVGLGLNTAPVNGVAVAALPPERSGTASGVLNTSRMVGATLGVAILGAVF
                     AAYAGQIPTAGEGFLSGLRAALTGSGVAELIGAAIAVTFIRRDSLHPQK"
     gene            complement(9474..10085)
                     /locus_tag="VIY07_17160"
     CDS             complement(9474..10085)
                     /locus_tag="VIY07_17160"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383519.1"
                     /translation="MSLVSTWFHGRTERTHPRLILIATSLGVLFAQIDTSVVNLPVKS
                     IAADLHSGVSKMQWVIDSYNLVYASLLLTGGTLGDLYGRRRIFILGIMLFIAGTLVCA
                     LAPNAGILILGRVVSGLGAAFEVPMSLVLLTLAYPGSKERAHALGVWASCNGLAFIIG
                     PILGGWLVDTIGWRSIFYLIVPVCAAAVALTYVAIRESSEPGG"
     gene            10483..10971
                     /locus_tag="VIY07_17165"
     CDS             10483..10971
                     /locus_tag="VIY07_17165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383520.1"
                     /translation="MQKISHVTMAIIVAVALYFAVVWGYDGLRILSSPSYGLEDVWRS
                     QFIFSIGSLVGLGPIGLIKLAAFFGALKLAVACICVLHIADRFRSLSRGQANSEILEA
                     GLILIVAISIVSVGPASFRDGAELIREHTLPLLLAALATGLCIFERSYAQRTKNAEIK
                     SQ"
     gene            complement(10985..12064)
                     /locus_tag="VIY07_17170"
     CDS             complement(10985..12064)
                     /locus_tag="VIY07_17170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HEY6383521.1"
                     /translation="MAKSTVRKGMPSVQLDKQEFKKHFLKRFYDPVFEPLTRELDRIA
                     DAAWISYSDYHKSPLTRKAGPGFADPNYDISIEWLEARSNIQAAERRQKSADSPSRVL
                     IVNGSSRNDQSCPGEISKTWRLVTLARDVIGNMPGFEVEILDLSRLTAEYGKVIYPCK
                     ACVSTAQPLCHWPCSCYPNHAIGQTGDWMNEIYPMWVAAHGVMIVCPVNWYQAPSSLK
                     LMIDRLVCADGGNPDPTSTSGKNAEKAKAIELAGWPYPRHLAGRVFSVVVHGDAAGAE
                     NLRRMLVDWMSDIGMIPSGHLALLDRYVGYLTPYATSHDDLDRDTDFQEDVRNAARTL
                     VQAVKDRRSGKLEPPDRGLHETRQK"
     gene            complement(12150..12539)
                     /gene="pcaC"
                     /locus_tag="VIY07_17175"
     CDS             complement(12150..12539)
                     /gene="pcaC"
                     /locus_tag="VIY07_17175"
                     /EC_number="4.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047575 - 4-carboxymuconolactone
                     decarboxylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-carboxymuconolactone decarboxylase"
                     /protein_id="HEY6383522.1"
                     /translation="MDDKQRYERGMARRRKVLGNEWVDRANARKTPFNQEFQDFITRV
                     AWGEIWTRPHYDERTRRVLVIGTMLALDKWEEFRMHVRAALTEGGFTPDDIKEIILQQ
                     AIYCGVPAANNAFKEAAEVITDVGKNK"
     gene            complement(12560..13342)
                     /gene="pcaD"
                     /locus_tag="VIY07_17180"
     CDS             complement(12560..13342)
                     /gene="pcaD"
                     /locus_tag="VIY07_17180"
                     /EC_number="3.1.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047570 - 3-oxoadipate enol-lactonase
                     activity [Evidence IEA];
                     GO_process: GO:0042952 - beta-ketoadipate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipate enol-lactonase"
                     /protein_id="HEY6383523.1"
                     /translation="MPVINADDGCPIRVEVEGRDGAPVLMLSNSLGTNLHMWDDQIPE
                     FTKHFRVVRYDRRGHGQSGVPNGPYSMERFGRDVLSVLDALKIKKANWCGLSMGGMVG
                     QWLGANAPDRVEKLVLSNTNSYYEDKTPWTDRIKFVTEKGLDAMVETNMQRWFTDGFR
                     KRAPEAIERMRKAFVATKVPGYIASCEAIRDMDFRASNPSITAPTLVIVGAQDPATPP
                     SAGETIQKAIKGAKLASLDAAHISNVEQPKQYTETVLNFLRG"
     gene            13498..13947
                     /locus_tag="VIY07_17185"
     CDS             13498..13947
                     /locus_tag="VIY07_17185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase subunit G"
                     /protein_id="HEY6383524.1"
                     /translation="MAMTMTGEVQLPATRDVVWAKLNDPDVLKACIPGCEELNKTSDT
                     EFQAVATTKIGPVKARFKGKVHLSDLDPPNGYKISGEGDGGVAGFAKGGATVALAEKD
                     GGTLLTYNVEAQIGGKLAQLGQRLVNGAAKKIADEFFQKFASTVGTA"
     gene            14121..14618
                     /locus_tag="VIY07_17190"
     CDS             14121..14618
                     /locus_tag="VIY07_17190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HEY6383525.1"
                     /translation="MPGVSMTVNGKPVTGDVEARTLLVQFLRENLRLTGTHVGCDTSQ
                     CGACVVHIDGIAAKACTTLTLQCEGAKITTIEGLADPDGPLHPMQEAFREHHGLQCGF
                     CTPGMIMAALDIVRRRGNDLDEHTIREQLDGNICRCTGYHNIVKAIAAGAKAMAKSGA
                     RQAAE"
     gene            14649..>15448
                     /locus_tag="VIY07_17195"
     CDS             14649..>15448
                     /locus_tag="VIY07_17195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6383526.1"
                     /translation="MSATGIGAAVRRKEDLRFITGKGQYTDDVIRPGETRAVFVRSPH
                     AHAKIKAIDTSAAKSLPGVVAVLTGKELANDKIGNLICGWMIHSKDGTPMKMAPHPAL
                     AADKVCHVGDAVAVVVASTYAQARDAAEKVNVDYEALPAVIDPAKTKSGPQIHEVAPK
                     NTIYEWSLGDAKAVDAAFANAKHVTKLDIINNRLVPNAIEPRAALAEYDAGTGHLTLW
                     NTTQNPHVSRLVIAAFVGMAPEHKLRVIAPDVGGGFGSKIFIYPEEVV"
BASE COUNT         3205 a         4574 c         4630 g         3039 t
ORIGIN      
        1 gcccgccaaa ctccttccct tgttcaaagg gtgccgccca aaaatgcggc ccgtccccga
       61 tggtcatgct gccggcggcg ttggcggcgg caagcgctcc gaccgcaatg ccgctgcgcg
      121 tcacagcgct ggcggaaccg atgccaccct ttagattgac ggtcgtggcg ccgagaccag
      181 cgccggcgct gccaagggca aagtcattgc ctgccgcccg ggtcgcttcg taaccgagct
      241 cgcgataggg cggatagcgc ccccaattct tgtcaccgcc ggccagcagg tcgaaaagga
      301 ttgcgcccga cacgatcggc acgcgcgcct cgcgcaccct gaagccgcgg ccctgttcgc
      361 gcagccaggc ctgcacgccc gacgcggcat cgaggccgaa tgccgatccg ccggacaaga
      421 cgatggcatc gatgctttcc acggtgtgcg ccggatccag tagggccgtc tctcgcgtac
      481 ccggcccgcc gccgcgcaca tccacgctgg cgatcacggc ctcatcgaag atgatggctg
      541 tgacgccgga acccagcttg ggatctccgg catgccccac acggacgccg ggaatatcgg
      601 taatcagatt gcgcgccatg gtgactcccg ggcaaaaccc tatcacgtcc gatcacgttg
      661 cggcgaagcc gccgcgacac gcttgcaagg atccccgttg cgtcgcattt agagacccca
      721 tgaaaggcga tgtcacctat ttggccgcgg tgcttgccgg cctagtcagc tttctctctc
      781 cttgcgtgct gccgctggtg ccgccctatc tggcgtttct ggcgggcacg tcgcttgaac
      841 gttttgcgga caaggaggct gaaccgcggg tcaagcggga gaccgtggcc gctgcggtcc
      901 tcttcgtgct gggcttttcc acggtgttcg tcgcgttggg cgccagcgcc agcgtcatcg
      961 gttcgcttgt gcgcgcttat tcgggaccgc tcgccaccat tgccggcatt gtgattatcg
     1021 tcatgggctt gcacttcctc ggtctcacgc ccatcgcgct gctgcatcgg cagaagcggc
     1081 tcgacgttgc gaagccggtc gggctttggg gagcctatgt gatcggcctt gcttttgcgt
     1141 tcggctggac gccgtgcata ggacctatcc ttgctgcaat tctcgccgtg gcggcatccg
     1201 agcagacggt gagcaaaggc gccagcctgc ttgcggtcta ttcgctcgga ctcgggattc
     1261 ctttcgtcgt tgcggccttt gcgatcgagc cgttcgcggc ttttctgtcg cggtttcgca
     1321 actatctcca ccgcgtggag caggtgatgg gcgcattgct ggtgatcacc ggcattgcgt
     1381 ttctgacggg gagcatcaac caggtgagcg tgtggctgct cgagacattt ccgattctgg
     1441 ggaagattgg ctaaaaaaaa gcccgccggg cggcgggctt ttgaatttac accgtgattg
     1501 attatttgac cttgctgcaa tcggagcccg ggcactcgac gtagtttatt tttccgctcg
     1561 gatccttctt ccaaatgtac atcacgtagt cgagctttgt gatgtcgcct ttcttgtcat
     1621 aggagatgtc gccgagcact gtcttgaacg gcatgccgga gtgcattttc tcggcgacct
     1681 tcttggggtc gagagacttg gccgcttccg ccgcctgctt gatgatctgg acgccggcgt
     1741 agctgtaaag cgtgtaggct tccggttcga actttttggc acggaattct tccacgacct
     1801 tttttgcgtc cggcctgttg cgcggatcgg gaccgtaggt catcagcgtg ccttcgacgc
     1861 ccggcccgcc gatcgaggcg aattcgtcgg acgtaatgcc gtcgccgccc atcatcggtg
     1921 ccttcacgcc ctggtcgcgc atctggcgca cgatcaggcc ggcctcggtg tacagaccgc
     1981 cccaataaat caggtcggcg cccgattgct tgatcttgga tacgagcgcg gaaaaatcct
     2041 tctcgccggt gttcacgcct tcgtacagaa cttccttgag gccgcccttg ttgatggtct
     2101 tcttggtttc atcggcgagg cctttgccat aagtggtctt gtcgtgaacg atcgcgatct
     2161 tcttgccttt gaaatgcttc gcgatgtatt cgccggcgac ttgcccctgt tgatcgtccc
     2221 ggccgcagac gcggaagatg ttccacatct tccgttcggt caccgtcgga ttggtggagg
     2281 ccggcgtaat ctgaagaacg ccgttttcct ggtagacctc cgaagagggg attgtgacgc
     2341 cggaattgta gtgtccgatg acgaatttca cgccgtcgcc ggtgaacttg ttggcaactg
     2401 aaacgccctg tttgggatcg gaggcgtcgt cgccgtagga cacgacgatt ttctggccga
     2461 gaatgccgcc ggcggcattg atgtcagccg cggcctgatc gacgccattc ttcatttgcg
     2521 caccggtcgc ggcgctcggg cccgtgatgg gtccgcccac accgaacttg atctgagctc
     2581 cagccgtttg ggccgccgca atagcgatac tcaacgcgaa gccgaacgtg gtgatttttt
     2641 tcatctctca ttccccctcg ataactggaa ccggtatttc atcgccgcaa tcctacgtca
     2701 gggaaatcgg cggcgccagc gcatcaggcc atcggattca ttaagccagc gatattgtgt
     2761 gatcatctgc ctggcgcgcg cggccttgaa acccaggtac ccgaaaacga tgcagaacac
     2821 gctgtcgacg aggtaataat ggagcgacag gaaggtgccg ccatacaggc tgaaatgtat
     2881 gaaccgaacc gccccggcga ggacgaagcc gtatgcgaca acctgccacc atggccgcca
     2941 ggttgccgca atggcgcggc cggcgagtat tgctgcgccg ccaccaagaa ttatggtgac
     3001 cagcacgaag acgccgaacg agccttcctc gtaaagaaac tcggggatcg agaaggcggc
     3061 ggtgacaata ttggtcaatg ccggccccct tcgagatagg ccgacttgat ctccgggtgt
     3121 tccagcagtt cgcggccggt tcccgacagg gtgataaacc cgttgaccat gacgtaggcc
     3181 cggtgagcga gcttgagcgc atggtaggca ttctgttcga ccaaaaatac cgtgaggccg
     3241 ccctcggcat tcagccgttt gatcgcatcg aagatttgcc gcacgaccag cggcgcaagg
     3301 cccagcgatg gctcgtcaag gagcagcagg cgaggctggg ccatgagggc gcgggcgatc
     3361 gccagcattt gttgctcgcc gcccgacagc gttccaccgc gctgaccgat ccgctgctgt
     3421 aatcggggaa acagcatcaa cacgtgatcg agatcgcgtt tgaactgcga cgggtccgca
     3481 gtgctggcgc ccatctgaag attctcaagc acggtcatgc gcgagaaaat gcggcgacct
     3541 tcgggagcct gcgcaagctt caggcgcgcg atttcatggg ttggcagtcg cgtgatgtcg
     3601 tggccggcaa aatagatctt gccttcacgg gctcgcggat tgccgcacac ggtcatcatg
     3661 agcgtagatt tgcccgcgcc gtttgcgccg atcagcgtga cgatttctcc ctcgttgacc
     3721 tccaggtcga cgcccttgag tgccatcacc cggccataaa aggttttgac gccgcgcacg
     3781 gtgagaagtg gcgtggtcat ggcaatgacc ctcctctccc tccccctgaa agggggagac
     3841 ggggggaggt gaaattctca tgcgtggtca taggccgacc tccgcctcga ctttggcgac
     3901 atcctggtcg gcaaccccca gataggcggc gatgactttc ggattgtcac ggatttcagc
     3961 cggcgcgccg tcggcgatct tgaccccgta atcgagcacg acgacatgat ccgaaatttc
     4021 catcaccact gacatatcgt gctcgatcag caggatcgaa atgtcgtacc gctcgcggat
     4081 tgcgaggaga agagtgttga gttcggcact ctcgcgtgga ttgaggccgg cggcaggttc
     4141 atccaggcat agcagcaccg gatccgtgca catggccctc gcgatttcga ggcgacgctg
     4201 cgcgccatag ggcaaatcac ccgcggcatc gtccgcgcgc gtcagaaggc cgactcggtc
     4261 gagccactcg cgcgcctttt caatcgctcc gcgctcggcc ttggcaaaag aggggaaccc
     4321 aaggacgccg agcagcgtat agcccgaggc gagcatcaag gggttgtgtt gcgctaccaa
     4381 caaattctcc agaacggtca tgcccggaaa aagccgaatg ttctggaacg tgcgtgcaat
     4441 ccgcgcctgc tgcgcaacga gatagtccgg catccgctca agcaaataaa gtccgttgcc
     4501 tgtgcgcttt atgctgcgct ccccgctgtc ggtcagcgct tctagccaat cccaggcagc
     4561 gttatcaccg tgacggagcg caatgcggcc ttcgctgggc ttgtaaaaac cggtaatgca
     4621 gttgaacacc gtcgtcttgc cggcgccgtt cggcccgatc aacgcggtga tgtcgccttg
     4681 tcgtgccgaa aacgagaggt cttccaccgc gacaagcccg ccgaagcgca tggtcagacg
     4741 ctctacctgc agcagtatgt cgcccgtgcg ggccatcagc cgcgaccctc cttgaccagg
     4801 tccttagcga tcgttttgcg ctctttcagg acaatcgatg gatcacgtgt cgcgataagg
     4861 ccgcgcggcc gccagatcat gatgagaacc atggcgaagc cgaacagcag catgcggtat
     4921 tgagtgggat cgaatgtcga cccgaacagc aatttcaaaa aatcgagctc gcgcatgatt
     4981 tcgatgccgc cgatcatcac aatggcggca atggccacac cgatctggct gcccattccg
     5041 ccgagcacca caatggagag aattgtcgcg gattcgagaa acgtgaagga gtcgggcgag
     5101 atgaagcctt gtcgcgccgc gaaaaacgaa ccggcgaagc ctgcaaacat cgcgcccatg
     5161 gcaaaagcag tcagctttgt attggtcgtg ttgatgccga gcgagcggca cgcaatttca
     5221 tcctcgcgca acgcttccca cgcgcggcca accggcaggc gtcgcaggcg caccgtcacg
     5281 aatgcagtga gaagcgcaag tgcgaggatc aggtagtaaa gaaatatcgt ccggtagatc
     5341 ggtgaaaact ccaacccgaa tacggcagcg aatccgcttt cctccgcatt gaatggaatg
     5401 ccgaaaaaag tcggccgtgg aatgcccgtg atgccggcat agccgttggt caagtcgacc
     5461 caattgatga ggacgatgcg aatgatttcg ccgaacgcga gcgtgacgat ggcgagatag
     5521 tcgccgcgca gacggagcac cggaaagccg agcaaaactc cccaaaaggc agcgaggatg
     5581 ccggcgagcg gcagaagaat ccagaacgaa aagccgaagg tcttggcgag aagggcgtag
     5641 gaataggcgc caacggcata aaatgccacg taaccgagat cgagaagccc ggcgagacct
     5701 acaacgatgt tcaggcccca tcccagcatc acgtaaatca ggacctgaat tccgaagttg
     5761 tctatccact tcacggcccg gccgtaaccc gctgtcgcga tgacgatggc cggataaaga
     5821 atgacgaaac cgagcgcaaa cgggatgatc cagctggcga catgtctgcg ccacggcgcg
     5881 ggctctgcgc tggggcgcat tgcgcgctgc tgcagccacg gctcgattgc gagggaatag
     5941 gcgagacgcc cgaggccagc gatcgcgact atggcaaaca gcagcggcca gcgggtgaca
     6001 aggatcaggt cattgcgaac atctgtgacg gtctcgaatc cgaccagtgg caggaacagg
     6061 ccgaaagcaa gcaacgccgt gaggcctgcg tcccgcaggg cacgggccgt atcgacgcgc
     6121 tttgctggcg cgccgctagc catatcagac cttctcgaca tccggccggc cgaacaatcc
     6181 ttgcggcagg aatatcaggg tgatcgcgag gacggaaaag gcggcaacgt ctttatagtc
     6241 gatggaaaaa tatgcggacc acatggtctc gatgaggccg atcaggatgc cgccgataac
     6301 cgcgcccggc agggaaccga tgccgccgag gaccgcggca gtgaaggcct ttacccccgg
     6361 cacaaagcca tcggcaaagc tgaccacccc atagtacatc aggtacatcg tgccggcgac
     6421 ggcagcgagc gcggctgcaa tgacaaaggt cattgaaatg gtccgatcga catcgacgcc
     6481 gaccagggcg gccatttttt gatcctgttc gcaagcgcgt tgcgcgcgac ccaagcgggt
     6541 cttcgtcacc aggtaccaga agcagacgag caggatcgcg gtcacgagcc agataatcag
     6601 ctgcttgagc gacagcgtca ccggatagtc attttgcgtg aacagaacaa attcgccctg
     6661 gaccatcggc ggaatcgact tgttgcgcgg accttgcgtc acctgcacga aattggagag
     6721 gaagatggac attccgattg ccgaaataag cggcgccagc cggaacgaac cgcgcaaagg
     6781 ccgataggcg agtcgctcga tggtccaatt gaccagcgag gtgaacagca tcgccacaat
     6841 cagaatgaga aagagcgcaa gcgcaatcga ggaaatgccg agcacgcttg acagcagaag
     6901 gaaagcgacc agtgcaataa agacagacac catgaacacg tcgccatggg cgaagttcac
     6961 catgccgatg atgccgaaca ccatggtgta gccgatggcg atcagcccat agatcgaccc
     7021 cagcgtgatg ccattgataa gctgctggag gaaaacttcc atcccctgcg ccttccgcta
     7081 ccccggccga cgaccgttcg ccccgacgct aaaggcttaa cagggcgtag ccgcagcggc
     7141 aacgccgaga ctgtcgcgtg ttattaagtc gcaagttgtg aagggggagg gcggaccagg
     7201 cgcgcgcgaa gcgcgtcagg gcggccgaga ccagccgtct cgagccgccg cttgttgact
     7261 agtgcaaacc gccaaacagc cagatcagta ccagaatcgg gatcggaatt cccagcagcc
     7321 acagcaataa gtaacgtccc atgtcggttc tcctctttgt gagagggaac acgcctgcca
     7381 gcctgaggtt cccaatactt tggaagggct cgcaaaggga acaaaaaccg cgcgtggcgc
     7441 gtttcttctt gccatggggc gcgtgcgtga gccgcgctca aattatgttg gagaggatag
     7501 taaaatgaat caaaatccaa accagaagcc cggccaacag cagcagggtg gtcagcagca
     7561 gggcggacag cagggcggac agcagaagcc cggccagcag cagcaaggcg gccagcgcga
     7621 gaagcccggt cagcagggcg gtcagcagca ggatcgctga cgcctagcga agagatcagg
     7681 aaagccccgc ccgcaaggcg gggcttttcg tttgagaagt cgcgctcggc agttgtttcg
     7741 caggtgaagt ggaatatgct tgcgccatgg gcgtctccgc gctgccgtta tttcacttat
     7801 acggcgatcc gccggacgac tccgcctttg actttatcca tatcgaaacg atcgcgtcgc
     7861 gctcgtccat ccatgactgg acaatccgcg cccaccgtca ccgcaatctc tttcaggtgc
     7921 tgctgatcga gaagggcggc ggcgagatga gtttcgaaac cgcaacggcg cgattctccg
     7981 cgcccgcagt gattctcgtg ccggctacca cggcacacgg ttttcgcttc acgccgcaag
     8041 tcaccgacgg ctgggtcgtc agctttaccg aggacgttgc cgacgcactt ggcgatcagt
     8101 cgggagaagc actggcgcga ttgaaagcgg ttggaagcca accggtgctc ccgctcgcca
     8161 acatggctga ggcgagacgt ctctcgacgc tttgcggtga gttatacgag gagggctcgc
     8221 tcgcgcggga aggctatcgg ctggccatgc gcggcttgct tgctcttatc gccattgagg
     8281 tcgttcgact cgctgtgagc agggcgcgca gtggcgccgt gacgctcttg cgatccgacc
     8341 cgcgggtcga cgaattgcgg cgacttgtgg atgaacattt ccgcaaggaa aggctcatca
     8401 gtttttacgc cgagaaattg gcgatgacat ccgatcgcct caacgaccac gtcaaacgcg
     8461 caacgggggt cactgccggt cacctgatcc gccagcgcgt cttgaccgag gcaaagcggc
     8521 aactcgtatt caccaaccag gcgatccatg aaatcgccta tgaccttgct ttctccgatc
     8581 cctcccactt cacgcggttt ttccgcaagc agacaggcac gaccccacaa gcgtttcgtg
     8641 acgggcgtgg cggctgaccc tatttttgcg gatgcaatga atcacgcctg atgaacgtga
     8701 ccgcgatcgc tgcaccgatc agttcggcta caccgctgcc ggtcagcgcc gcgcgcaaac
     8761 cggagaggaa tccttcgccg gcagtgggta tttgcccggc gtaggcagca aacacagcgc
     8821 ccaggattgc gacgcccaat gtggcgccga ccattcggga tgtattgagt acgcctgacg
     8881 ccgtgccgga ccgttccgga ggcaatgccg cgacggcgac accgttgacg ggagccgtat
     8941 taagtccgag gcccacgccg actatcagca gagccagttc agtgaaaaac acgcttgtgt
     9001 ttccgtttat gaacgccaag gcaagcgcgc cgacgctgcc catgcaggtc atcccggcgg
     9061 tcatgacaat tcgtggtcca agctgattgt tgagatagca gacaacctgc gagaccaaaa
     9121 agaagctgat cggcatgggc agcagctcca agccggcagt gagagggctg gcaccgcgca
     9181 tggtttgaaa ataaagcggc atgatgaaca gcagggcgta catcccgaaa gtcatcaggc
     9241 ccgcgatagc gatcgttgcc gaaaaaaccg gccgacgcag aaattcaaga ggcaggagcg
     9301 gcccgggcgt gcgcgcttcg acccagacga aaagcgacaa tgcgagtacc gcgacgccgg
     9361 cgatcgaaat gattgtcggc gacgtccacc cccgatgcga tccttcaatg gctgcaaagg
     9421 caaatgcgcc gaggccgacg atggcaagcc cttggccggg caaatcaagt cggtcaacct
     9481 cccggctccg agctttcccg aatggcgacg taggtgaggg cgaccgcggc cgcacaaacc
     9541 ggcacgatca ggtagaagat gcttcgccag ccgattgtgt cgacaagcca gccgccaagt
     9601 atcggcccga tgatgaaagc gagtccgttg cagctcgccc aaacgcccaa cgcgtgcgcg
     9661 cgctccttgc tgcccggata ggcaagcgtg agcaatacca gcgacatcgg cacctcgaag
     9721 gcggcgccca gcccgctgac aacgcgtccg aggatcagta ttcctgcatt gggggcaagc
     9781 gcgcagacca acgtgcctgc gatgaacagc atgatcccca aaatgaaaat ccgccgacgg
     9841 ccgtaaagat cgccaagtgt cccaccggtc agcagcaagc ttgcataaac aagattgtag
     9901 gaatcgatca cccattgcat cttgctgacg cccgaatgca gatcggcggc tatgcttttc
     9961 acgggaaggt tgacgacgga cgtatcgatc tgggcgaaca gcacgccgag cgaagtcgca
    10021 attagaatca ggcggggatg tgtgcgttcc gttctgccgt gaaaccacgt tgaaaccagg
    10081 ctcatggcat tctttccttt gttcactctt gccgtgcccc tggattgcgc gacctcacgc
    10141 aacaccaatt cgaaagccgc gtttgcatca cccgaactaa ttcgagaagc gaatgtttgt
    10201 catccgaccg aacgcagagt gatgctcgat gtattcggca tgaatctcga cattgccggt
    10261 atgcattcgc ctcattgcga caatgctcct tcgaaaccgg gatttaggag gcggtgatcg
    10321 cgaagcccac ccgttttctg caaccaggca agccgaggcc tttgctcctc gtgtctccag
    10381 ttgggcaggg ttaaagggct aacaagtaag gtaaagtttc ggtttctttt gaacttcgca
    10441 tttgaagcgc ctacgcatgt tcctcgccga aggaggaacc gcgtgcaaaa aatttcccac
    10501 gtcacgatgg caataatcgt cgccgttgcg ctgtattttg ccgtggtctg gggttacgac
    10561 ggcctgcgca tcctctcgtc gccgtcctat ggcctcgaag acgtctggcg ctcgcagttt
    10621 atcttctcaa ttgggagcct tgtcggcctg gggccgattg ggctgataaa gctcgcggcg
    10681 ttcttcggtg cgctgaagct cgcagtggcc tgcatctgcg ttttacatat cgctgaccgg
    10741 ttccgaagcc tttcgcgcgg acaggcgaac tcggagattc tggaagcggg acttattctg
    10801 atcgtggcaa tcagcatcgt atcggttggc ccggcttctt ttagagatgg agcagagctc
    10861 atccgtgagc acactttacc gcttctgctt gccgcgcttg cgaccgggct gtgcatcttc
    10921 gaacgcagct atgcgcagcg gaccaaaaac gccgagataa agtcgcaata gtccgtcggc
    10981 ctgattactt ctggcgtgtt tcgtgcaggc cgcgatccgg cggctccagc ttgcccgagc
    11041 gtcggtcctt aactgcctgc accagcgtcc gcgcggcgtt gcgaacatcc tcctggaaat
    11101 cggtgtcgcg atcgagatcg tcgtggctgg ttgcataggg agtgagatag ccgacgtaac
    11161 ggtcgagcag ggccaaatga cctgagggga tcattccaat atcgctcatc caatcgacaa
    11221 gcatccgacg caaattctcg gctccggccg cgtcaccgtg gacaacaacc gaaaacacgc
    11281 gtccggcgag gtggcgcgga tagggccatc ctgcgagctc gatcgctttg gctttctcag
    11341 cgttcttgcc gcttgtggac gtcggatcgg ggttgccgcc atcggcgcaa acgagccgat
    11401 caatcatcaa cttgagtgag gagggcgcct gataccaatt caccgggcac acgatcatca
    11461 cgccgtgtgc ggcgacccac atcggataga tctcgttcat ccaatcgccg gtttgtccga
    11521 tcgcgtgatt gggataacag ctgcaaggcc agtggcagag gggctgtgca gtcgaaacgc
    11581 aagccttgca gggatagatc acttttccat attccgcggt gagccgcgat agatcgagga
    11641 tctcgacctc gaagccgggc atgtttccga tcacgtcgcg ggccaaggtc acgagacgcc
    11701 aggttttcga tatttcgcct ggacagctct ggtcatttcg cgacgacccg ttgacgatca
    11761 ggacgcgcga gggagagtcc gcggattttt ggcggcgctc ggcagcctga atgttcgacc
    11821 gtgcctcaag ccattcgatc gagatatcgt agttcggatc agcgaaacca ggcccggctt
    11881 ttcgcgtaag cggtgacttg tggtagtcgc tataggaaat ccacgcggcg tcggcgatcc
    11941 tgtcgagttc gcgggtgagc ggctcgaaaa cggggtcgta aaatcttttc aggaagtgct
    12001 ttttgaattc ttgcttgtcg agctgaacgc tcggcatccc cttacggaca gtgctcttgg
    12061 ccatggatgt tccccatcgg agtggcccat ggcctccatt gaacccgttt caaagcgaaa
    12121 tgacgagagc gtcactgcag gcgcaatgat catttgttct tcccaacgtc cgtaatcact
    12181 tcggcggctt ccttgaaggc gttgtttgcg gccggcaccc cgcaatagat cgcctgctgc
    12241 aggatgattt ccttgatatc gtccggcgtg aatcctccct cggtgagcgc cgctcgcaca
    12301 tgcatgcgga actcctccca tttatccagg gcgagcatcg tgccgataac caggacgcga
    12361 cgcgtgcgct cgtcgtaatg gggacgggtc caaatctcgc cccaggccac gcgtgttatg
    12421 aaatcctgaa attcctgatt gaagggagtt ttcctcgcgt tcgcgcggtc gacccattca
    12481 ttgccgagca ccttgcggcg cctggccatg ccgcgctcgt agcgctgctt gtcgtccatg
    12541 gttgctcctt tgggcgatct tatccacgca ggaagttgag cacggtctcg gtatattgct
    12601 ttggctgttc cacgtttgaa atatgtgcag cgtcaagact cgcgagcttg gcgcccttga
    12661 tcgctttctg aatggtctca cccgccgaag gcggcgtggc tggatcctgg gctccgacga
    12721 tcaccagggt cggcgccgtg atgctaggat tactggcgcg gaaatccatg tcacggatcg
    12781 cttcgcagct ggcgatatag ccggggacct tggtggcgac gaatgctttt ctcatgcgtt
    12841 cgatcgcctc tggcgcacgc tttcgaaagc cgtccgtgaa ccatcgctgc atgttcgttt
    12901 cgaccatcgc gtcgaggccc ttctcggtca cgaacttgat gcggtcggtc cagggcgtct
    12961 tgtcttcgta ataggaattg gtgttggaca gcacgagctt ctcgacccga tcgggcgcat
    13021 tcgcgcccag ccactggccg accatgccgc ccatcgacag tccgcaccag ttcgctttct
    13081 tgattttgag cgcatcgagg actgacagga cgtccctgcc aaaccgctcc atcgaatagg
    13141 gaccgttggg gactccggat tgtccgtgac cgcgccggtc gtaacgcacc acgcggaagt
    13201 gcttggtgaa ttcgggtatc tggtcgtccc acatgtgcag attggtgccg agcgaattgg
    13261 acagcatcag cactggcgca ccgtcgcggc cctcaacttc gacccggatc gggcagccgt
    13321 catcggcgtt gattactggc ataaagtcct cccctaagat ggattacgat tattggtccg
    13381 tggcttgacg gaaaccctta atgtgccgcg tgcttcctgc aaaggtcttt tcttcgccgt
    13441 tgtgacggct taagccggga ctgccgccgg attgttcgat tgtaaaggag acgcgcaatg
    13501 gcgatgacaa tgacgggcga ggtccagctg ccggccactc gtgacgtcgt ttgggcaaag
    13561 ctcaacgacc cggacgtcct gaaagcctgc atcccgggtt gcgaggagct caacaagacc
    13621 tctgacacgg aatttcaagc ggtcgcgacc acaaaaatcg gcccggtgaa agcgcgcttc
    13681 aagggcaagg tgcacctttc ggatcttgac ccgcccaatg ggtacaagat ttccggcgag
    13741 ggtgacggcg gcgttgccgg ttttgcgaag ggtggggcga ccgttgccct ggccgaaaaa
    13801 gatggtggca cgttacttac ttacaatgtc gaggcgcaga tcggcggcaa gcttgcccaa
    13861 ctcggtcagc ggcttgttaa cggcgcggcc aagaagatcg ccgacgaatt cttccagaag
    13921 tttgcctcga ccgttgggac cgcctgatac ggtttcacta gaggttgaag cggtatttgt
    13981 ccgccaatcc cttgacccgg accatggtcg aggttcagac ttatttggcc gaaatcggct
    14041 cgatttcgcg aacgaacttc cgccgcccgc gataaaggcg gcgaaaagag gccgtttggg
    14101 cccaatcggg agggaaggtc atgcctggcg tgtccatgac ggtgaacggc aagcccgtta
    14161 ccggggatgt cgaagcgcgc actttattgg tccaattcct gcgcgaaaat ttgcgactga
    14221 ccggcactca cgtcggctgc gacacctctc aatgcggcgc ctgcgtcgtc catatcgatg
    14281 gcatcgcggc caaggcctgc accacgctca ctctgcagtg tgagggcgcg aagatcacga
    14341 ccatcgaagg cttggccgat ccggatgggc cgctgcaccc catgcaggaa gcctttcgtg
    14401 agcatcacgg actgcagtgc ggcttctgca cgccgggaat gatcatggcg gcgctcgata
    14461 tcgtgcgccg ccgcggcaac gatctcgacg agcacaccat ccgcgagcaa ctcgacggca
    14521 acatctgccg ttgcaccggc tatcacaaca tcgtcaaagc gattgccgct ggagcgaaag
    14581 ccatggccaa gagcggcgcg cggcaggccg ccgaatagaa tcaaaaactc aacgggaggg
    14641 agaccgccat gagcgcgacg ggtatcggcg cggcggtgcg ccggaaggaa gatctccgct
    14701 ttatcacggg caagggccaa tataccgatg acgtcatccg gccgggcgaa acccgtgcgg
    14761 tctttgtgcg ctcgcctcac gctcacgcaa agataaaggc aatcgatacc agtgccgcga
    14821 aatctctgcc tggggtcgtc gccgtactga cgggcaaaga actcgccaac gacaagatcg
    14881 gcaacctgat ttgcggatgg atgattcatt ccaaggatgg cacgccgatg aagatggcgc
    14941 cgcacccggc gctggcggcc gacaaagttt gtcacgttgg cgacgcggtc gcggtcgtcg
    15001 tcgcttcgac ttatgctcag gcgcgcgacg ccgccgagaa agtaaatgtc gattacgaag
    15061 cgctgccggc ggtcattgat ccggccaaga cgaagtcagg accgcaaatt cacgaggtgg
    15121 cgccgaagaa taccatctac gaatggtctc tcggcgatgc caaagcggtt gatgccgcct
    15181 tcgccaacgc caagcatgtc accaagctcg atatcatcaa caatcgtctt gtaccgaacg
    15241 cgatcgagcc gcgcgccgcg cttgcagaat atgacgccgg cacgggtcat ctgacgctct
    15301 ggaatacgac ccagaacccg catgtatcgc ggctggtgat tgcggccttc gtcgggatgg
    15361 cgcccgaaca caagttgcgc gttatcgcgc cggatgtcgg aggcggcttc ggctcgaaaa
    15421 ttttcatcta tccggaagag gtggtctg
//
LOCUS       DATDHO010000873         2360 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_143165, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000873 DATDHO010000000
VERSION     DATDHO010000873.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143165"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..631)
                     /locus_tag="VIY07_17200"
     CDS             complement(<1..631)
                     /locus_tag="VIY07_17200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase"
                     /protein_id="HEY6383527.1"
                     /translation="MAQLDGPRLEPRSGPAEQLVVFVHGYGADGNDLIDVGRVWQGLL
                     PRAAFVSPHAPWPCGQSPIGREWFPLTFRDPDERWIGVNEAAPVLEKFLDAELKRRNL
                     PPSALALVGFSQGTMMSLHVGLRRAIAPTAIVGYSGMLVIPENGDLDAFAAEIRSRPP
                     VLLIHGDADQLIPVEALLHAAQGLAALDVPTEWHISAGVAHGVDEEGLRQ"
     gene            complement(603..1328)
                     /locus_tag="VIY07_17205"
     CDS             complement(603..1328)
                     /locus_tag="VIY07_17205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HEY6383528.1"
                     /translation="MTYFLHTDADLQTGLAQLILADPRLKPIAERAGPFTLRRREAGF
                     PGLCAIVCGQQLSTASAAAIRSRLFAAFDPFHHDAVRRARADKLKRLGLSAPKIKSIR
                     EIGKAVARGDIDLTAIGNMSADDAHATLITLHGVGPWTADIYLLFCLGHADAFPAGDL
                     AVQESARMALRLRKRPDAKALSRLAEGWRPWRGVAAHLLWAYYRVLKKRDVTPLQANG
                     RSQKSGKQVKRRKKNGSTRRPTT"
     gene            1446..2315
                     /gene="gluQRS"
                     /locus_tag="VIY07_17210"
     CDS             1446..2315
                     /gene="gluQRS"
                     /locus_tag="VIY07_17210"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEY6383529.1"
                     /translation="MPPVFRFAPSPNGYLHLGHALSALLNADMTRASAGRLLLRIEDI
                     DTARCRPEYEAAIYEDLSWIGLQWEAPVWRQSSRWDDYRAALSQLQAMGLIYPSFETR
                     AEIARLVAAREVHGPWPRDPDGVPLYPGHAKTILDAERRRRIESGEPYALRLDMRAAA
                     ARAGALTWIETGAGPAGESGTIIVDASVWGDVILARKETPTSYHLAVALDDAAQGITD
                     IVRGRDLFYATAVHRLLQALLGLPQPRYHHHKLLLGADGSKLSKSTQSTGLRELRAKG
                     ATPAEIRRLAGLD"
BASE COUNT          441 a          749 c          748 g          422 t
ORIGIN      
        1 cttgccgaag gccttcctcg tcgacgccat gggcgacccc cgccgagata tgccactccg
       61 ttggcacatc gagcgctgcg agaccctgcg ccgcgtgcaa cagcgcctcg actggtatga
      121 gctgatcggc gtcgccgtga atcagaagga ccggtggccg gctgcgaatc tcggccgcga
      181 aagcatcgag gtcgccattc tccgggatca ccagcatgcc cgagtagccg acgatcgccg
      241 tcggtgcgat cgcccggcgc aggccgacgt gcagtgacat catggtgccc tggctgaaac
      301 caaccagcgc cagcgcggac ggcggaagat tgcgccgctt gagctcggca tcgagaaact
      361 tttcaagcac gggggcagcc tcattcacgc cgatccagcg ttcgtccgga tcacggaacg
      421 ttagtggaaa ccactcgcgg ccgatggggc tctgtccgca tggccagggc gcatgcggcg
      481 atacaaatgc agcgcgcggg agcagccctt gccacacgcg tccgacgtcg atcaggtcgt
      541 taccgtctgc gccgtagcca tgcacgaaaa ctaccagctg ctcagcgggg cctgaacgcg
      601 gctcaagtcg tgggccgtcg agttgagcca ttcttcttcc ttctctttac ttgcttgccg
      661 gatttttgcg aacggccgtt cgcctgaagc ggcgttacgt ccctcttttt caggacgcga
      721 tagtaggccc acagcagatg cgccgccacg ccgcgccaag gacgccagcc ctcggcgagc
      781 cgggacagag ctttggcgtc cgggcgcttg cgcaagcgga gcgccatacg cgcggactcc
      841 tgaaccgcca ggtcgccagc ggggaacgca tccgcgtgac caaggcagaa caggagatag
      901 atatcggcag tccaggggcc gacgccatgg agcgtgatca gggttgcgtg cgcatcgtcg
      961 gcgctcatgt tgccaatcgc ggtgagatcg atatcccccc tggcgaccgc tttcccaatc
     1021 tcgcggatgg atttgatctt gggggccgac aaaccaaggc gcttgagttt gtcggcacgc
     1081 gcgcgccgta ctgcatcatg atgaaatggg tcaaatgctg cgaacagccg gctgcggatt
     1141 gcggccgcac tggccgtcga aagctgctga ccgcagacga tggcacagag gccgggaaag
     1201 cccgcctcgc gtcggcgcag ggtgaaagga cctgcccttt ccgcaatggg cttgagtctg
     1261 ggatcggcga ggatcagctg ggcaaggcct gtctggagat cggcgtcggt gtgaaggaag
     1321 taggtcatcg ggcttcttag tattatctcg ctcgtcgtag cggaagccgg aatccagaaa
     1381 aaggctgctt gactggatct ccggttaccc atgaacgaag gacttcacat cggctacccg
     1441 gaaccatgcc acccgttttc cgtttcgcac cgtcgcccaa cggctacctg cacctcggcc
     1501 acgccttatc ggcgttgctg aatgccgaca tgacacgcgc aagcgccgga cgcctgctat
     1561 tgcggatcga agatatcgac actgcccgtt gccggcccga atacgaagca gcgatctacg
     1621 aggatctgtc gtggattggc ctgcaatggg aagcgcccgt atggcgacag tccagccgct
     1681 gggatgacta tcgggcagcg ttaagccagc ttcaggccat ggggctgatc tatccaagtt
     1741 tcgaaactcg cgccgaaatt gcccggctgg tggccgcgcg cgaggtgcat ggaccttggc
     1801 cccgcgaccc ggatggcgtg ccgctctatc caggccatgc gaaaaccatt ctggatgccg
     1861 agcgaaggcg ccgtatcgag tccggcgaac cttatgcgct gcgtctggac atgcgggccg
     1921 cggcggcgcg ggccggtgca ctgacgtgga ttgagaccgg cgcgggaccg gccggcgaat
     1981 ccggcaccat cattgtcgat gcttcggtct ggggcgatgt gatcctggcg cgcaaggaaa
     2041 caccgaccag ttatcacctg gccgtggcgc tcgacgatgc cgctcaaggc attaccgaca
     2101 tcgtccgcgg gcgcgatctc ttttatgcga ccgcggtgca tcgacttctg caggcactcc
     2161 ttggcctgcc gcagccccgg taccatcacc acaaactctt gctcggtgcc gacggcagca
     2221 agctttcgaa gtccacgcag tcgaccggcc tgcgcgagct gcgagcgaaa ggtgcaacgc
     2281 ccgccgaaat ccgccgtctg gccggcctcg attgaaccgt ccttccatgc cattgtcggc
     2341 ccggcgaaag ggacaatggc
//
LOCUS       DATDHO010000874         8877 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_90118, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000874 DATDHO010000000
VERSION     DATDHO010000874.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8877
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90118"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(30..815)
                     /locus_tag="VIY07_17215"
     CDS             complement(30..815)
                     /locus_tag="VIY07_17215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEY6383530.1"
                     /translation="MNTATAQGSLLKPAKLNTPVAVEIIDMNKWYGDFHVLRDINLKV
                     MGGERIVICGPSGSGKSTMIRCINRLEEHQTGQVLVDGVELTADLKKIDEVRREVGMV
                     FQHFNLFPHLTVLENCTLALIWVRKMPKKQAEEVARHYLKRVKIPEQANKYPGQLSGG
                     QQQRVAIARALCMNPKIMLFDEPTSALDPEMVKEVLDTMVELAHDGMTMLVVSHEMGF
                     ARQVANRIVFMDEGQIVEVNVPQEFFAHPQHERTKLFLSQILH"
     gene            complement(825..1904)
                     /locus_tag="VIY07_17220"
     CDS             complement(825..1904)
                     /locus_tag="VIY07_17220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEY6383531.1"
                     /translation="MTGALGWLRDNLLSTPFNIALTILILLLLAWAIPELVKFLFLDA
                     VWSGTDRDACLESVQHREIGACWPFVWERLPYFIYGSYPISERWRVDVFFAMLAAGIV
                     WLLWLNAPRRDLGAIYFFAVLPISSFILLTGWSAIGLRPVDTVLWGGVLVTIVVAAVG
                     IVVSLPLGILLALGRRSHMPVVRSLSVIFIEFVRGVPLVTVLFMASVMLPLFVPEQLS
                     PDKLVRALVGIALFASAYMAEVVRAGLQAIPRGQYEGAMAVGLRYWQMMRLVVLPQAL
                     KVTIPNIVNTYIGLFKDTTLVFIVGIFDLLRTIEVAWIDPKWATPVTSTTGYVVAAIF
                     YLIFCYGMSRYARAMEARLARGDLR"
     gene            complement(2002..3195)
                     /locus_tag="VIY07_17225"
     CDS             complement(2002..3195)
                     /locus_tag="VIY07_17225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018687775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEY6383532.1"
                     /translation="MSTDLPAPSRPAPVVFYNDPRVRSIAYQIALFAVVAVLVYAAAS
                     NAIENLARARIASGFGFWNNVAGFDISQTLIEYSSRGSTYGRAFWVGLLNTLLVAGIG
                     IILATILGFIVGISRLSSNWLLAKVAGCYVEIIRNLPLLLQLLFWYNAVLKALPDIRE
                     SIAIGGVVFINNRGLFLPTPIFKSGFGAVEIALLVGIVGAILFRIWARRRQERTGRRA
                     PVLLVTLALLIGLPLAIFFLAGLPLGFEFPQAGRFNIAGGTEVLPEFVALLFGLSIYT
                     AAFIAEVVRAGILAVARGQTEAAYSLGLRPGLTLRLIVVPQAMRVIIPPLTSQYLNLT
                     KNSSLAVAIGYPDLVQVFTGTVLNQTGQAVEVVAITMLVYLVISLTTSLLMNIYNRRV
                     ALTER"
     gene            complement(3277..4287)
                     /locus_tag="VIY07_17230"
     CDS             complement(3277..4287)
                     /locus_tag="VIY07_17230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY6383533.1"
                     /translation="MKRFTTILALLLAIAAQSASAQTLKAVKDRGMLNCGSNGSLAGF
                     GLPDAQGKWTGLDVDFCRAIAAAVLNDAEKVKFVPLSAKDRFTALQSGEVDVLARNTT
                     WTSSRDTSLGLNFIGVNYYDGQGFMVRKALKVNSALELNGAAVCVQQGTTTELNLADY
                     FGAHKMQLKTVTFATSNEAVKAYDAGRCDTYTTDASALYAERLRVANPNDHVILPEII
                     SKEPLGPVVRHGDDQWFDIVKWTMFAMIDAEELNISQKTLDEALKSTNPEIKRFVGTE
                     GNFGEQLGLTKDWAVRIVKQVGNYGESFERNVGQGSPLKIERGLNKLWTKGGIHYAPP
                     IR"
     gene            4539..5732
                     /gene="metC"
                     /locus_tag="VIY07_17235"
     CDS             4539..5732
                     /gene="metC"
                     /locus_tag="VIY07_17235"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEY6383534.1"
                     /translation="MTKKIEAPIKPDTRLVTSGRDPESYFGFVNPPVYHASTLLYPTA
                     EDQVAHRARYNYGRRGTPTSEALENALREISGEACAGVALLPSGLAAISAALLATTRA
                     GDHVLVPDSVYRPTRNFCNGVFKRLGIDTTYYDPLVGGGIVKLFKPNTRVAFVEAPGS
                     QSFEMQDIPAIVRVAHENGALVLMDNTWATPLYFRAFEKGVDLEIQAGTKYIGGHSDL
                     MFGCVSANAATLPALKDTVYSMGLCVGPDDMYLALRGLRTLGVRLARHYQSGLQVARW
                     LAQRPEVLRVLHPALESDPGHAIWKTDFTGASGLFSVVFKPTSEQSVHAFLNALTLFG
                     LGFSWGGFESLAILFDCTEYRTATKWAPGGPTIRLHIGLEDPGDLLADLTRGFAAMAS
                     VAGAS"
     gene            complement(5758..6087)
                     /locus_tag="VIY07_17240"
     CDS             complement(5758..6087)
                     /locus_tag="VIY07_17240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6383535.1"
                     /translation="MLVDIANAVGGYLHDVFIGSADWGILVGYVAQAMFAMRFVVQWI
                     ASERAGKSVVPTAFWIFSIGGGLMLLGYALYRKDPVFIVGQAFGVFVYLRNLQFVMRS
                     GRTTAVP"
     gene            complement(6169..6894)
                     /locus_tag="VIY07_17245"
     CDS             complement(6169..6894)
                     /locus_tag="VIY07_17245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEY6383536.1"
                     /translation="MTTTNPTVSVVVPVRNEAGNIAPLVAEIAAALNGQWVFEVVYVD
                     DGSTDGTGAELDQLMKERPWLRRIHHMQSCGQSAAVRTGVTAARAAIVVTLDGDGQND
                     PAFIPALVRTLENGARVGLVAGQRVGRKASGFKKFQSRIANVVRGAVLRDGTRDTGCG
                     LKAFRRDIFLRLPYFDGLHRFLPALVRREGYGIGYVDVVDRPRAHGVSNYGMWDRLWV
                     GILDLAGVWWLIRRKKRIPEIEG"
     gene            complement(6906..7757)
                     /locus_tag="VIY07_17250"
     CDS             complement(6906..7757)
                     /locus_tag="VIY07_17250"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEY6383537.1"
                     /translation="MSSVNGLNRQEGMAISTLRRCVPNLTMAISLLARPPRLGQRQVP
                     WFGSRALAVMGVIAVAVLVSMFTLDAAVIRGVAQVPRWVISVFREITEFGKSGWFLWP
                     LGVLFLVLAALPPVLTPFSQRVLAVIMVRVGFLFTAIALPGLFSSIVKRLIGRARPNV
                     GGSLDPLLFSPFAWVPAYAGMPSGHATTAFAVFVAFGSLWPRARTALLVYAVLICISR
                     PMVLAHYPSDVLAGALVGIVGAMMVRRYFADRGLGFSMGPDGKIHQFPGPSLGRIKAV
                     ARGLLAP"
     gene            complement(7754..>8877)
                     /locus_tag="VIY07_17255"
     CDS             complement(7754..>8877)
                     /locus_tag="VIY07_17255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HEY6383538.1"
                     /translation="PAILWTAIAVGVLLKGPLILMFVGLTAAVLCAVDRSLQWLWSLR
                     PVSGLLWLLLLASPWFIAIAAKSGGNFFVQAIGHDMLDKVTSGQEAHGAPPGYYLLLF
                     WVTFWPGAVLAGLAASVVWKSRQEPGPRFLLAWLLPSWLVFEAVMTKLPHYVLPLYPA
                     IAILIAGIVERHGVSKQRWMARGTIGWFLFPTAVAIGVLVLFIMFGRELGLATWPFSA
                     AAVIFGLFAWWLYEADGAERSLLRAMVASIFIAITVYAITFPQLPSLFPSVLIAEEIR
                     AADCERPRVASTSGYQEPSLVFLLGTETRFTDGAGAADFLRLKPCHFALIDPRSERNF
                     VQSAESMGLRYSLVRRVQGYNISTGKPISLSVFRSQANQ"
BASE COUNT         1961 a         2737 c         2565 g         1614 t
ORIGIN      
        1 cgccaaggac tagacgtcga cgcgcgttct cagtgcagaa tctggctgag gaaaagcttt
       61 gtgcgctcat gctgcggatg cgcgaagaac tcctgtggga cattgacctc gacgatctgc
      121 ccctcgtcca tgaacacaat gcgatttgct acttggcgcg caaagcccat ttcgtggctt
      181 accaccagca tcgtcatgcc gtcatgggca agctccacca ttgtatcgag aacctccttc
      241 accatctccg gatcgagggc cgacgtcggc tcatcgaaca gcatgatttt cggattcatg
      301 cagagcgcgc gcgcgatcgc gaccctttgc tgctgtccgc ctgacaattg acccggatat
      361 ttgttggcct gctcgggaat cttcacgcgc ttgagatagt gccgcgccac ttcctccgcc
      421 tgtttcttcg gcattttgcg cacccagatt agcgccagcg tgcagttctc cagcacggtc
      481 aggtgcggaa acaggttgaa gtgctgaaat accatgccga cttcgcgccg cacctcgtcg
      541 atctttttca gatccgccgt cagctccacg ccgtcgacca gaacttggcc ggtctggtgc
      601 tcttcaagtc gattgatgca gcggatcatg gtcgacttgc ccgagccgga ggggccgcaa
      661 ataacgatgc gttcaccgcc catgactttc agattgatgt cgcggagcac atgaaagtcg
      721 ccgtaccact tgttcatgtc gataatttcg acggcaaccg gcgtgttgag cttcgctggc
      781 ttgaggagcg acccttgtgc cgttgcggtg ttcatggcct ctccctagcg cagatcgcct
      841 cttgcaagtc gggcctccat ggcgcgcgca taacgcgaca tgccgtagca gaagatcaga
      901 tagaaaatcg ccgcaacgac gtaaccggtc gtgctggtga ctggcgtcgc ccatttgggg
      961 tcgatccacg ccacctcgat cgtacgcagg agatcgaata tcccgacgat gaagacaagc
     1021 gtggtgtcct tgaacaaccc gatataggta ttcacgatat tcgggatcgt caccttcagc
     1081 gcctgcggca gcactaccag gcgcatcatt tgccagtatc gtagccccac cgccatggca
     1141 ccttcatatt gacctctcgg gatcgcttgc agccctgcgc ggacaacttc cgccatatac
     1201 gctgatgcga acagcgcgat gccgaccagg gcgcgcacca gtttgtcggg cgatagttgc
     1261 tccggcacga atagcggcaa catcacgctg gccatgaaca gcaccgtcac cagcggcacg
     1321 cctcgcacga attcaatgaa tatgaccgag agcgatcgca cgaccggcat gtgggatcgt
     1381 cgaccaagcg cgagaagtat tcccagcggc agcgagacca cgatgccgac ggccgcaacc
     1441 acgattgtca caagcacgcc gccccacagc acggtgtcga ccggacgaag gccaatcgcc
     1501 gaccaccctg taagcagaat gaatgacgaa atgggcagca ccgcaaagaa atagatggcg
     1561 ccgaggtcgc gccgtggcgc gttgagccac agtagccaga cgatccccgc ggcgagcatc
     1621 gcgaagaaga cgtcgacccg ccaacgctcg gaaattggat aggagccgta gatgaagtac
     1681 ggcagccgct cccagacgaa cggccaacag gcgccgattt cgcgatgttg aaccgattcg
     1741 aggcaggcgt cgcgatccgt gccgctccac accgcgtcga ggaaaagaaa tttgaccagc
     1801 tcgggtatcg cccaggccag tagcagaagg atcaggatcg tgagcgcaat gttgaatggc
     1861 gtcgacagca gattgtcgcg cagccatccc agcgcccccg tcattttcgt cggcggcggt
     1921 tgcggcggga tggtggcgcg ccgtacgaac gctaactccg caacggcaag atcggcttcg
     1981 gccatggtca taaggaagcc ctcaccgctc tgtcagcgcc acgcgcctgt tgtagatgtt
     2041 catcaggagc gaagtcgtga gactgatcac gagatagacc agcatcgtga tcgcaacgac
     2101 ctcgaccgcc tgtccggtct ggttgagcac tgtgccggtg aaaacctgca ccagatcggg
     2161 ataaccgatg gcgaccgcga gcgaggagtt cttggtcaaa ttgaggtact ggcttgtgag
     2221 cggcgggatt atcacccgca tggcctgagg caccacaatc agccgaaggg tcagtcccgg
     2281 ccgtaatccc agcgaatagg cggcctcggt ttgacccctc gctaccgcga gaatcccggc
     2341 gcgcacaacc tccgcaatga acgccgcggt atagattgag aggccgaaca acagggcgac
     2401 aaattcggga agcacctcgg tgccgccggc aatgttgaag cgtccggcct gcggaaattc
     2461 aaatccaagc ggaagccccg cgagaaaaaa tatcgcgagt ggcaatccga tcagcaacgc
     2521 aagcgtgacg agcaggaccg gcgctcgccg gccagtgcgc tcctgtcgcc tgcgtgccca
     2581 gattcgaaaa aggatcgcgc cgacgatgcc cacaagcagt gcgatctcca ccgcaccgaa
     2641 cccgctcttg aaaatcggcg taggcagaaa caagccgcga ttgttaataa agacgacgcc
     2701 gccgatggcg atgctctcgc gaatatccgg gagagccttg agaacggcgt tgtaccagaa
     2761 gagcaactgc agcagcagcg gcaggtttcg gatgatctcg acatagcagc cggcaacctt
     2821 cgccagcagc caattgctcg acagccgcga tatgccaacg atgaagccga gaattgtcgc
     2881 gaggatgatg ccgattccgg caaccagcag cgtattgagc agtccgaccc agaatgcccg
     2941 gccgtatgtc gagccgcgag aggaatactc tatcagcgtc tggctaatgt cgaagccggc
     3001 tacgttgttc cagaatccga atccggaggc gatacgggcc cgggcgagat tctcgatcgc
     3061 gttgctggcg gcggcataaa ccagaaccgc aacgaccgcg aacagtgcaa tctgataagc
     3121 aatgctccgg accctggggt cgttgtagaa cacgacgggc gcggggcgcg acggcgccgg
     3181 caggtcagtc gacatttccc cctcgtcgca cttgcggcgg cggtttcctc cgacaaaact
     3241 gccgcgggcc tgacacccgc gggccggcag ccccggtcag cggatcggcg gcgcgtagtg
     3301 gatgccgccc ttggtccata gcttgttcaa gccacgttcg atcttgagcg gcgagccttg
     3361 gcccacattg cgctcgaatg actcgccgta attaccgact tgcttgacga tgcggacagc
     3421 ccaatccttg gttaggccga gctgttcgcc gaaattgcct tcggtcccga cgaaacgctt
     3481 gatctccgga tttgtcgact tcaacgcctc gtcgagagtc ttctgcgaaa tgttcaactc
     3541 ttccgcatcg atcatcgcaa acatcgtcca tttcacgatg tcgaaccatt ggtcatcgcc
     3601 gtggcgaacc acggggccga gcggctcttt ggagatgatc tccggcagaa tgacgtgatc
     3661 attcggattg gcgacgcgca gccgttccgc ataaagggcg gaggcgtcgg tagtgtaagt
     3721 atcgcagcgg ccggcgtcat aggccttcac cgcctcgttc gacgtcgcga aggtgacggt
     3781 cttgagctgc attttgtggg cgccaaaata gtcggcgagg ttgagttcgg tcgtggtgcc
     3841 ctgctgcacg caaacggctg ccccattgag ctcgagcgcg gaatttactt tgagcgcctt
     3901 gcgcaccatg aagccctggc cgtcgtaata attgacgccg atgaagttga ggccgagcga
     3961 ggtgtctcgc gacgacgtcc acgtcgtgtt ccgcgcaaga acatcgacct ctcccgattg
     4021 caacgccgtg aagcgatcct tggctgacag gggtacgaac ttcacctttt ccgcatcgtt
     4081 gagcacggca gccgcgatcg ctctgcaaaa atcgacatcg agtccggtcc atttcccctg
     4141 tgcgtcagga agcccgaagc cagcaagcga accgttgctg ccgcaattga gcattccacg
     4201 atccttcacc gctttgagcg tctgagccga tgcgctctgg gcggcaatgg cgagcagcaa
     4261 tgcaagtatc gttgtaaatc gcttcatgtg gcttttcctt caacgctcat cggaccgcgg
     4321 cccttcggaa tgctcaaaat ttcggtcgca ggacctgcgc cggcggtcaa aactatcggt
     4381 ttcaggcccc tcttgccccc gatggccccc ttctttcggc atctcagaac gatcaggttg
     4441 ccgggtcaag gggttgacgc ttacgtcttg tgacgacgta tatgtccgcg gtgcctattt
     4501 gcgcccatcc catcgccgag aaatggtatt ccgtccgcat gacgaaaaag atcgaggcgc
     4561 ccatcaaacc tgacacccgg ctcgttacgt ccggccgcga ccccgaaagt tactttggtt
     4621 ttgtcaatcc gccggtctat cacgcctcaa cattgctata tcccacggcg gaagatcagg
     4681 tcgcccatcg cgcccgctac aattacggac gccgcggcac gcccacgtcc gaagcgctgg
     4741 aaaatgcatt gcgcgaaatc agcggcgagg cttgcgccgg ggtggcgttg ctaccgtccg
     4801 ggctggcggc aatatcggcg gcgctgctcg cgaccacccg cgcaggagat catgtgctcg
     4861 tcccggacag tgtctaccgg cccacccgaa acttctgcaa cggcgtgttc aagcggctgg
     4921 ggattgatac gacttattac gatcccttag tcggcggagg aatcgtcaaa ctcttcaagc
     4981 cgaatacgcg ggtcgctttc gtcgaagcgc ctggctcgca aagcttcgaa atgcaggata
     5041 ttcctgcgat cgtcagggtc gcgcacgaaa acggcgccct cgtgttgatg gacaacacct
     5101 gggccacgcc gctttatttc cgcgcgttcg aaaaaggtgt ggatctcgag attcaagccg
     5161 gcacaaaata tatcggcgga cattccgacc tcatgttcgg gtgcgtgtcg gcaaatgccg
     5221 cgacgttgcc ggccctgaaa gacaccgttt attcgatggg actctgcgtc ggtcccgacg
     5281 acatgtatct cgcgctgcgc ggcttgcgca cgctcggcgt gcggctcgcc cgccactatc
     5341 agtcaggcct gcaggtggcg cgctggctcg cgcaacggcc ggaggttttg cgcgtgctgc
     5401 acccggcgct cgaaagcgac cccggtcatg ccatctggaa aacggacttc accggtgcaa
     5461 gcggcctgtt cagcgtcgtc ttcaaaccga cgagcgagca gtcggtacac gcgttcttga
     5521 atgctctgac gctgttcgga cttggctttt catggggtgg cttcgagagc ctggcgatat
     5581 tgttcgactg caccgagtac cggaccgcta ccaaatgggc tccgggcgga ccgacgatcc
     5641 gcctccacat cggtctggaa gatcccggtg atttgcttgc cgaccttacg cggggattcg
     5701 cggccatggc ttccgttgca ggagcctcgt agttcacagc caggcacgag cccaaattta
     5761 tggcaccgct gttgtgcgtc cgctgcgcat cacgaattgc agattgcgca aataaacaaa
     5821 cacaccgaac gcttgcccca cgataaagac ggggtctttc cggtacagcg catagccgag
     5881 caacatcaat ccgccgccga tggaaaaaat ccagaaggcc gtcggaacga cgcttttgcc
     5941 ggcccgctcg gatgcgatcc actgcaccac aaaacgcatg gcgaacatcg cctgggccac
     6001 gtagccgacc agaattcccc agtccgcact gccaatgaat acatcgtgca ggtatccgcc
     6061 cacggcgttt gcaatatcga ccagcatttg tcatttcctt cagtaacgcg gaccaaaacc
     6121 ggtttttcga tgccgattcc ggtcaagaac gttttctaca gtcgggtgct aaccctcaat
     6181 ttcgggtatt cgcttcttgc gccggatcag ccaccacacg ccggcaagat ccagaatgcc
     6241 aacccacaag cggtcccaca ttccatagtt cgaaacgccg tgggcgcgcg gacgatccac
     6301 gacgtcgaca tatccaatgc cgtaaccttc ccggcggaca agcgccggaa gaaagcggtg
     6361 cagaccgtca aaatacggca gcctgaggaa gatgtcgcgg cggaatgcct tcaatccgca
     6421 gccggtatca cgcgtaccgt cgcgcagcac ggcgccccgc accacgttgg cgatacgcga
     6481 ttggaatttt ttgaatccac tcgccttgcg gcccacgcgc tgacccgcga ccaggccgac
     6541 gcgcgcgcca ttttccagtg tgcggacaag cgcggggata aaggcggggt cgttttggcc
     6601 gtcaccgtca agcgtgacga caatggcggc gcgcgctgca gtcaccccgg ttcggaccgc
     6661 cgccgattgg ccgcaggact gcatgtggtg aatgcgacgc agccagggac gctccttcat
     6721 cagttggtcc agctcggcac cggtgccgtc cgttgaccca tcgtcgacat aaacgacttc
     6781 aaacacccat tgcccattca gcgctgcggc aatctccgca accagtggag cgatattgcc
     6841 agcctcattg cgaacgggca ccacgacgga aaccgtcgga ttggtcgtag tcatggatcg
     6901 atgtcttatg gggccagaag gccgcgggca accgctttga tgcgcccaag cgacggtccc
     6961 ggaaattgat ggatcttgcc gtccgggccc atcgaaaaac ccagcccacg gtcggcaaaa
     7021 tagcggcgaa ccatcatggc tccgacaatc ccgaccaacg cgcccgcgag cacgtcgctc
     7081 ggatagtgtg caagcaccat tgggcggctg atgcagatca acacggcata gactaacaat
     7141 gctgtacggg cacgtggcca cagggagccg aatgcgacga atacggcgaa cgcggtcgtg
     7201 gcgtgtccgg acggcattcc cgcataggca ggtacccacg cgaacggact gaacagaagc
     7261 ggatcaaggc tcccgccgac gtttggccgc gcgcgtccga tcaatctttt gacgatggag
     7321 gaaaaaaggc ctggcagggc gatcgccgtg aacagaaacc cgacgcgcac catgatgacc
     7381 gcgagcacgc gttgcgaaaa cggcgtcaac accggtggca acgcagcaag caccaggaac
     7441 aggacgccaa gcggccaaag aaaccatccc gatttgccga attccgtgat ctcacgaaag
     7501 acagaaatga cccagcgagg cacctgggcg acgccccgga taacagctgc gtcgagcgtg
     7561 aacatcgaca cgagaacagc caccgcgatg acgcccatga ccgcaagcgc gcggctgcca
     7621 aaccacggga cttgtcgctg tcccaaccgc ggcggccgcg ccaaaaggct tatcgccatc
     7681 gtgagattgg gcacgcagcg acgcaatgtc gatatcgcca tcccttcctg acgattcaat
     7741 ccgtttaccg agctcattgg ttcgcctgtg accggaagac agacaacgat atcggttttc
     7801 cggtgctgat attgtagccc tgcacgcgtc gcacaagcga gtagcgcagt cccatcgatt
     7861 ccgcgctttg gacgaaattg cgctcgctac gagggtcgat caaagcgaag tggcatggct
     7921 ttaagcgcag gaaatccgcc gcaccagccc cgtccgtgaa tctggtttcc gttccgagta
     7981 gaaatactag gcttggttcc tgatagccag atgtcgaggc gacacggggc cgctcgcaat
     8041 ccgcagcacg gatctcctcg gcgatgagca cgctggggaa caacgagggc aactgcggaa
     8101 atgtgatagc gtagacagtg atcgcgatga atatagacgc caccatggcg cgcagcagcg
     8161 agcgttcagc gccatccgct tcataaagcc accaggcaaa caagccgaag atcacggcgg
     8221 cggccgaaaa tggccacgta gccagaccga gttctcggcc gaacatgatg aaaaggacca
     8281 gcacgccaat cgcgacagcg gttggaaaaa gaaaccagcc aatagtgccg cgtgccatcc
     8341 agcgctgttt ggacacgccg tgacgctcga caatccccgc aatcaggatg gcaatggcgg
     8401 gatagagcgg caggacgtag tgtggcagct tggtcatgac tgcttcgaac acgagccacg
     8461 acggcagcag ccaggcaagc aggaaacggg ggccaggctc ttgacgcgac ttccagacaa
     8521 ccgatgccgc caaccccgcc aacacggcgc cgggccaaaa ggttacccag aacagcagca
     8581 gataataacc gggcggcgcg ccgtgagcct cctggccgct cgtcaccttg tcgagcatat
     8641 cgtggccaat ggcctgcacg aagaaattgc cgcccgactt tgcagcaatt gcgatgaacc
     8701 agggagaggc cagaaggagc agccagagaa gacctgaaac cgggcgcagt gaccacagcc
     8761 actgcagcga gcggtcaaca gcgcacaata ccgcagccgt aagacccacg aacatcagta
     8821 tcaacggacc tttgagcagc acgcccacgg caatcgcggt ccacaagatc gccggct
//
LOCUS       DATDHO010000875         1687 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_440414, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000875 DATDHO010000000
VERSION     DATDHO010000875.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1687)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1687)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1687
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440414"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..826
                     /locus_tag="VIY07_17260"
     CDS             <1..826
                     /locus_tag="VIY07_17260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6383539.1"
                     /translation="AQRRKFLPKLATGEMIGCFGLTEPDHGSDPGSMVTRAEKVSAGY
                     KLNGAKTWISNSPVADVAVVWAKLDNVIRGFLVERGTKGFSTPKIEGKLSLRASITGE
                     IVLDDCVIPEENLMPNVKGLAGPFGCLNNARYGISWGAMGAAEFCWHRARQYTLDRKQ
                     FGRPLAANQLVQKKLADMQTEIAIGLQGALRLGRMLEAGKASPPSISLMKRNNCGKAL
                     EIARLARDMHGGNGISEEYHVMRVLSNLETVNTYEGTHDIHALILGRAQTGIQAFF"
     gene            951..>1687
                     /locus_tag="VIY07_17265"
     CDS             951..>1687
                     /locus_tag="VIY07_17265"
                     /inference="COORDINATES: protein motif:HMM:NF014035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY6383540.1"
                     /translation="MDLMTIAFLVGAGIVAGIIASMVGGAAVVIYPALIATGVSPQLA
                     AVSNLASIMPATMLAALSDRSQLPPFNRAFVGLIAASIIGAGAGAAALLLTPERMFAQ
                     IVPLLLGFATLLFAYSERISRWLRTRAEGRGHAIAFDIASLKVVLPVSFYGGYFGAGV
                     GIMMLGVFSLATGGDYRSANVAKNFVSSLNGFAATVVFATQGAVLWPQTLALAVGTIA
                     GGLIGAYVARVIPRNVVRVLIVVVGAAL"
BASE COUNT          290 a          508 c          540 g          349 t
ORIGIN      
        1 agcgcagcgc cgcaaatttc tgccaaagct ggcaaccggc gagatgatcg gatgcttcgg
       61 gctgacggag cccgatcacg gttccgatcc cggttcgatg gtgacgcgcg ccgagaaagt
      121 atcggccggc tacaagctca acggagcgaa gacctggatt tcgaattctc ccgttgccga
      181 tgtcgcggtc gtctgggcca agctcgacaa cgtgatccgc ggcttcctgg tcgagcgtgg
      241 cacgaaggga ttctccaccc cgaagatcga aggcaagctt tcgcttcgcg cctccataac
      301 cggcgagatc gtgctggacg attgcgtgat cccggaagag aatttgatgc ccaacgtgaa
      361 aggcctcgcc ggtccattcg gctgcctcaa taatgcacgc tacggaattt cctggggcgc
      421 catgggcgcc gcggaattct gctggcatcg cgcccgccag tacacgctcg atcgcaagca
      481 gttcggtcgt ccgctcgccg ccaatcagtt ggtgcagaag aagcttgcgg atatgcagac
      541 cgaaatcgcg atcgggctgc agggagccct gcgcctcggg cgcatgctgg aagcgggcaa
      601 ggcctcgccg ccgtcgatct cgctgatgaa gcgaaacaat tgcggcaagg cgctcgaaat
      661 cgcgcgcctt gcgcgcgaca tgcacggagg caacggcatt tcagaggaat accacgtgat
      721 gcgcgtgctc tcgaacctgg agacggtgaa tacgtacgag ggcacacatg atattcatgc
      781 tctgatcctc ggccgcgcgc agaccggcat ccaggcgttt ttctagttcg caatgggctc
      841 cccgtccggt catccccgcg acagcgggga tccagggaat tcgattaacc tttgcattgt
      901 gcgggctggg ttcccgcttg cgcgggaatg aacgggggcg gggaccgcgc atggatttga
      961 tgaccatcgc ctttctcgtc ggcgccggca ttgttgcagg aatcatcgca agcatggtgg
     1021 gtggcgcagc ggtcgtcatc tatccggcgc tgattgcgac cggcgtatcg ccacagctcg
     1081 ccgcagtatc caatctggcc tccatcatgc cagcaacgat gctggcggca ttatcggacc
     1141 gatcgcaact tccgccgttc aatcgtgctt tcgttggtct gatcgccgcc tcgattattg
     1201 gtgcaggcgc cggcgcagcg gctctgctgc tgacgccgga gcgaatgttc gcgcagatcg
     1261 tgccattgtt gctcggcttt gcgacgttgc tgttcgccta ttccgaacgg atcagccgct
     1321 ggctccgcac ccgcgcggag ggacgcggac atgcgattgc gttcgacatc gccagtctca
     1381 aggtggtgct gccggtctcg ttttatggtg ggtacttcgg cgccggcgtg ggcattatga
     1441 tgctcggtgt attctcgctg gcgacaggcg gcgactatcg ctcggccaat gtcgccaaga
     1501 atttcgtctc gagcctcaac ggatttgctg ccaccgtggt gttcgcgacg cagggcgccg
     1561 tgctgtggcc gcagaccctg gctctcgctg tcggaacgat cgcgggcgga ttgatcggcg
     1621 cctatgtcgc gcgcgtcatt ccgcgcaacg tcgtgcgcgt gctgatcgtg gtcgtcggtg
     1681 cggcgct
//
LOCUS       DATDHO010000876         2772 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_240847, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000876 DATDHO010000000
VERSION     DATDHO010000876.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2772
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_240847"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            32..130
                     /locus_tag="VIY07_17270"
     CDS             32..130
                     /locus_tag="VIY07_17270"
                     /inference="COORDINATES: protein motif:HMM:NF023816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383541.1"
                     /translation="MHHGAAIAEGTPGEVVRNRAVIDSYLGAEAVA"
     gene            130..834
                     /locus_tag="VIY07_17275"
     CDS             130..834
                     /locus_tag="VIY07_17275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002966212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383542.1"
                     /translation="MLKVENLDVFYGDAQALDGLSLEIQEGAIVAIVGANGAGKTSLI
                     RTIAGMYSPTRGHVYFRGLDIAGWPSHRICDLGVGQVAEGRQVFPSLSVAENLAMGAL
                     LPRARSSQAQNLEKVYELFPVLAERRHQAAGTLSGGEQQMLAIGRCLMGAPELVMFDE
                     PSLGLAPTVVQAVLRCIRDLNRDGLTCVLVEQNVAVSLKLANFAYVLENGRIALSGSG
                     EALLGDDRVREAYLGL"
     gene            complement(856..1560)
                     /locus_tag="VIY07_17280"
     CDS             complement(856..1560)
                     /locus_tag="VIY07_17280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEY6383543.1"
                     /translation="MTDSRYVIPPAPQAAIAVAGTDKMFPVRRIWCVGRNYIEHIREM
                     GQDERAPPFFFAKPADAIVPDGGTVPYPSLTKDMHHEVELVVALKSGGRNIPVAKAND
                     CIYGYAVGIDLTRRDLQIASRDVKRPWEIGKAFDSSAPCGPLMPASKIGHPAKGRIVL
                     KANGQVRQDGDLNQMIWNVPETISKLSEMVALEAGDIIMTGTPAGVAATVAGDKLECE
                     IEGVGKLTVTIGSALK"
     gene            complement(1669..>2772)
                     /locus_tag="VIY07_17285"
     CDS             complement(1669..>2772)
                     /locus_tag="VIY07_17285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383544.1"
                     /translation="ERFDRNVAAVEHEANKMARVSNRSSPLMETLGGCAVAIAIIYSG
                     YRVIETGATPGQFYSFIAAFLLAYEPAKRLARLNIELNSALVGVRVLFEVLDSPPSEP
                     LDSNKPSLQVKAARLAFDDVHFAYRNDEPVLRGMSFVAEPAKLTALVGPSGGGKSTVF
                     NLLLRFYDAKRGKVLIDGQDIVSVSRRSLRQHIAYVGQEVFLFRATVRENIEFGKPGA
                     SEDEIVAAAKAAYAHDFIMSFPRGYDTPVGEHGLQLSGGQRQRVAIARALIKNAPIIL
                     LDEATAALDSESELQVREAMDHLCQGRTTLVIAHRLHTVSHADCIHVVEDGRVVESGR
                     HEDLLRSGGRYASFYRLQLQEQEPDAPVAAVAS"
BASE COUNT          508 a          837 c          865 g          562 t
ORIGIN      
        1 cgtcatggcg ctcgccaatc gcattgtggt gatgcatcac ggggcggcga ttgccgaagg
       61 aacgcccggc gaggtcgtcc gtaaccgcgc ggtcatcgac agctaccttg gcgcagaggc
      121 ggtcgcatga tgttgaaggt cgaaaatctc gacgtcttct atggcgacgc gcaggcgctc
      181 gatggcctgt cgcttgagat tcaggaaggc gcgatcgtcg ctattgtggg cgccaatggc
      241 gccggcaaga catcgctcat ccgcaccatc gctggcatgt acagcccgac gcgcggacat
      301 gtctactttc gcggcctcga tatagccggc tggccgagcc acaggatttg cgatcttggc
      361 gtcggacagg ttgccgaagg ccgccaggtc tttccgtcgc tgtcggttgc cgaaaatctt
      421 gcgatgggcg cgctgctccc gcgggcgcgt tcatcacagg cgcagaacct ggaaaaggtc
      481 tatgagctgt tcccggtgct cgccgagcgg cgacaccagg ccgccggcac gctctctggc
      541 ggcgagcagc agatgctggc catcggacgc tgcctgatgg gcgcgccgga gttggtgatg
      601 tttgacgagc cctcgctcgg cctcgcgccg actgtcgtgc aggccgttct gcgctgcatc
      661 cgcgatctca atcgcgacgg cctgacctgc gtgctggtcg agcagaatgt tgcggtctcg
      721 cttaagctcg cgaacttcgc ctatgttttg gagaatggcc gcatcgcgct ctccggctca
      781 ggcgaggcgc tgctcgggga tgaccgggtc cgtgaggctt atctcggact ctagatcatt
      841 attctcaacc aacattcact tcagcgctga accgatcgtc accgtcaatt tgccaacgcc
      901 ttcgatctcg cattcgagct tgtcgcccgc cacagttgcg gcgacccccg caggggtgcc
      961 ggtcatgatg atatcgccgg cctcgagtgc caccatctcg gaaagcttcg aaatcgtttc
     1021 cggaacattc cagatcatct gattgaggtc gccgtcctgg cgaacctggc cgtttgcctt
     1081 gaggacaatt ctgcccttgg cgggatgtcc gatcttgctc gccggcatca gaggcccgca
     1141 tggcgccgag gaatcgaaag cctttccgat ttcccatggc cgcttcacgt cgcgcgaggc
     1201 gatttgcaga tcgcggcggg tcaggtcgat gccgacggca tagccgtaga tgcaatcatt
     1261 cgccttggct accgggatgt ttcgtccgcc gctcttcaac gcaaccacaa gctcgacctc
     1321 atggtgcata tctttggtca gcgacggata aggtacggtg ccgccatcgg gcacaatggc
     1381 gtccgcaggt ttggcgaaaa agaacggcgg cgcgcgctcg tcctgcccca tctcgcggat
     1441 gtgctcgatg tagttgcggc cgacgcacca gatgcggcgg acgggaaaca tcttgtcggt
     1501 gcctgcaacc gcgattgcag cttgcggcgc gggcggaatg acgtatcggc tatcggtcat
     1561 gatcggttgg atgtcgctct ggcgagagat ctggctgcac aacaatgcgc gtcggggaaa
     1621 tgtgggtgtg cgtatcaggt gtcgtgcgcc gccgtcaacc gcggtctatc aagacgcgac
     1681 ggcggcaacg ggagcgtctg gttcctgctc ctggagctgg agacggtaga acgaagcata
     1741 tcggccgccc gaacgcagca ggtcttcatg tctgccggat tcaacaacgc gtccgtcctc
     1801 gaccacgtgg atgcagtcgg cgtgcgagac ggtatgaagc cgatgcgcga ttacaagcgt
     1861 ggtacggccc tggcacagat ggtccatggc ttcgcgcacc tgcagttcgg attcggagtc
     1921 gagcgccgcg gttgcctcat caagcaatat gatcggtgcg ttcttgataa gggcgcgtgc
     1981 aatagcgact cgctggcgct gaccgccgga tagctgcaaa ccgtgctcgc cgaccggcgt
     2041 atcgtagccg cggggaaacg acatgataaa gtcgtgcgca tatgcggcct tggcggctgc
     2101 cacaatttca tcctcgctgg cgcccggctt gccgaattca atgttctcgc gaaccgtagc
     2161 gcggaacagg aatacttcct gtcccacgta ggcgatatgc tgccgaagcg agcgacgcga
     2221 taccgaaacg atatcctgtc cgtcgatcag gaccttgccg cgctttgcgt cataaaaccg
     2281 caaaagcagg ttgaatactg ttgactttcc gccgcccgat gggccgacca gggcggtcag
     2341 cttggccggt tcggccacaa aggacattcc gcgcagcacc ggttcgtcat tccgatacgc
     2401 gaaatggacg tcatcgaaag caagacgcgc ggccttgacc tgcaagctcg gcttattgct
     2461 atccagcggc tcgcttggcg ggctatccag cacttcgaac agcacgcgca cgcccaccag
     2521 cgcgctgttg agctcaatat tcaggcgggc gagacgtttt gcaggctcgt aggctagcag
     2581 gaatgcggcg atgaacgagt agaattggcc cggcgttgcg ccggtttcga tcacccgata
     2641 tccgctgtag ataatggcga tagcgacggc acagccgccg agcgtttcca tcagcgggct
     2701 tgagcgattg gacacccgcg ccatcttgtt ggcctcatgc tcgaccgcgg cgacattccg
     2761 gtcgaaccgc tc
//
LOCUS       DATDHO010000877         2920 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_440461, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000877 DATDHO010000000
VERSION     DATDHO010000877.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440461"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1498
                     /locus_tag="VIY07_17290"
     CDS             <1..1498
                     /locus_tag="VIY07_17290"
                     /inference="COORDINATES: protein motif:HMM:NF018513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HEY6383545.1"
                     /translation="GIYGQLALTLIAAFLLLAGVANAFNAQNSMINVVRLLTRSRRLI
                     PQTAVIGSSAVGLISGSSSANAAVVGTITIPLMIRYGVPPTFAAAVETASSMGGLIDP
                     PMMGAAAFLMAEFLGVPYWDVVLRGFGFSFIYYISVACAVYLLCVRLLPAGKIEKPQV
                     PVYEKITTSIFFLSVIYLVYLMGWVGKGELLAALYTAGCMLVLLIVVFLYFKFVLKDP
                     TLKDETLFGNIRRGIETHAEMTSYLTLLLATLGIMIGLFTVTGFINRMGAILLDLGAW
                     NIIAMILMAWVFGWFLGAGLPPTATYIIGAVIIVPPMTKLGIDPWVAHFFVFFLSVWG
                     ELSPPTSLAAAVSARIANTSFMQTMYEALKICAPITLMTFAIFTRSELVVNSGWRQIG
                     DVLLVTTSTCGIAFALYGRCHKNRIVDLAFRFVLLILSGVTMFHPNDALVWWTGAVGL
                     AALIWAIRQHSAVAAPENQAGTVAPGAPTPQTPENIAPILAEAKRDIG"
     gene            complement(1848..2084)
                     /locus_tag="VIY07_17295"
     CDS             complement(1848..2084)
                     /locus_tag="VIY07_17295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383546.1"
                     /translation="MHPHRLTEFSVRITFAIFLAHAASAQVTDRMKATAPEKMMPVDK
                     ALKMRECEKRMEQQKIKMEDRSRLLDECVWAKAK"
     gene            complement(2158..>2920)
                     /locus_tag="VIY07_17300"
     CDS             complement(2158..>2920)
                     /locus_tag="VIY07_17300"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383547.1"
                     /translation="QVSKVGEIVNSMKANGVDVIVAAGFPTTLACKVANVPTVVFFGA
                     GDPVATRLIDSLARPGGNITGISDNAATLATKRLEVIKQAVPKVRRVAMLWNRNDLGM
                     SMRYEASADAARSLGVTVQPLGMREPDDFAGVFEAMDRDPPDAIFMVADSLTTLNRKR
                     VFDYAGARRIPALYEYDVPNVRDGGLMSYGPDLKESMERAAGLTARILGGARPADLPF
                     EEPTHYKLVINLKTAKATGIELPMNFLALANEVIE"
BASE COUNT          552 a          889 c          814 g          665 t
ORIGIN      
        1 cggcatctat ggccagcttg cgctgacttt gatcgcggcc ttcctgttgc tcgccggcgt
       61 cgctaacgcc tttaacgcgc agaattcaat gatcaatgtc gtgcggctgc ttacccgctc
      121 ccgccgcttg atcccgcaaa ccgcggtgat tggatcgagc gcggtcgggc tcatcagcgg
      181 cagcagttca gcgaatgctg ccgtagtcgg caccatcacc attccgttga tgatccgcta
      241 cggggtaccg ccgacattcg ccgcggccgt cgagaccgca tcttcaatgg gcgggctgat
      301 cgaccctccg atgatggggg ccgcggcttt tctcatggcg gagtttcttg gcgtgcccta
      361 ctgggatgtc gtgctgcgcg gctttggatt ctccttcatc tattacatct cggtagcctg
      421 cgcggtttat ctcctttgcg tgcgactgtt gccggccggg aaaatcgaaa agcctcaggt
      481 gccggtctat gagaaaatta cgaccagcat cttttttctc tcagtgatct acctcgttta
      541 tctgatgggc tgggtcggca agggtgaact gctcgcggcg ctctatacag ccggctgcat
      601 gctcgtgctg ctgatcgtgg tttttctcta tttcaaattc gtgctgaagg atcccactct
      661 caaggacgag acgttgttcg gcaacatacg acgcggcatc gaaacgcacg ccgagatgac
      721 gtcttacctc acgctgttgc tcgccacgct cggcatcatg atcgggctgt tcaccgtcac
      781 cggcttcatc aaccgcatgg gcgccatact gctcgatctc ggtgcctgga acatcatcgc
      841 gatgatctta atggcctggg tattcggctg gttcctcggc gccggcctgc caccaacggc
      901 gacctatatc atcggcgcgg tgatcatcgt gccgccaatg acgaaactcg gcatcgatcc
      961 gtgggtggca catttctttg ttttcttcct gtcggtctgg ggtgagttgt cgccgccgac
     1021 ctcgcttgcc gccgcagtgt ccgcccgcat tgccaacacc tcattcatgc aaaccatgta
     1081 cgaggcgctg aaaatctgcg cgccgattac gctgatgacc ttcgcaatct tcacccgctc
     1141 tgaactggtg gtgaattcgg gttggcggca gatcggcgac gtcctgctgg taacgaccag
     1201 cacctgcggc atcgcttttg cgttgtacgg ccgctgtcac aaaaatcgaa ttgtggatct
     1261 ggcgttccgt tttgtcttgt tgatcctttc cggcgtaacg atgttccacc ccaacgacgc
     1321 actggtgtgg tggaccggcg ccgttgggct tgcggcactg atctgggcga tccggcagca
     1381 cagtgctgtc gctgcgccgg agaaccaagc ggggaccgtt gcgccaggcg caccaacgcc
     1441 acagacgcca gagaacattg cgcccattct ggctgaggcc aaacgcgaca tcggataaaa
     1501 cacagaaggg ccgcacatac caacagggca ttctccttca cacgggagaa ggtcctaggt
     1561 tcaatcccta cagcgtgcac cattatttca gtgggttagc agaagacacc ctgctgcgat
     1621 ttggtctgac agcaccccga cagcaccagc ggtcgtatcc ctttcaaaat tattttttgc
     1681 gcccttacta aaatcgaatt gaccagatcc gtcgccagtt tggggagccg gtttgcatct
     1741 ccttctggtg agcaaaaccg caaaaattcc cgaccttttg atccgatgtc aggcacagcc
     1801 ccaccgcgcc accaacgggg cctgctcacc cgaaagcaga cacgttctta ttttgccttg
     1861 gcccaaacgc attcatccag caagcgagag cggtcctcca ttttgatctt ttgttgctcc
     1921 atccgctttt cgcactcgcg catcttcagt gccttatcga ctggcatcat cttttccgga
     1981 gcagtggcct tcatgcgatc cgtcacctgc gctgacgcag cgtgcgcgag aaatatcgcg
     2041 aaggttatcc ggacagaaaa ttcggtcaga cggtgcgggt gcacgaggtc tcctattacg
     2101 agaccatccc aatattaggc cccaacttag gcgggccaag tgggagtcta cttggcgcta
     2161 ctcgatcacc tcgttggcga gcgccaaaaa attcatcggc agctcgatgc ccgtggcctt
     2221 tgcggtcttg aggttgatga cgagcttgta atgcgtcggc tcctcgaacg gcagatcagc
     2281 cggccgcgcg ccgcccaaga tgcgtgcggt gaggccggcc gcgcgctcca tgctttcttt
     2341 caggtcgggt ccataagaca tcaagccgcc gtcacgcaca ttggggacat cgtattcgta
     2401 gagggctgga atacggcgcg cgccggcgta gtcgaatacg cgcttgcgat tgagagttgt
     2461 gagcgagtcc gcgaccatga agatggcatc cggtgggtcg cgatccatgg cctcgaatac
     2521 tccggcaaaa tcgtcgggct cgcgcatgcc gagcggctgc accgtgactc caagcgaccg
     2581 cgcggcatcg gcggaggcct cataacgcat gctcataccg agatcgttcc ggttccacaa
     2641 catcgctaca cgtcgcacct tcggcaccgc ttgcttgatc acctcgagac gtttggtggc
     2701 gagagtcgcc gcgttgtcag aaatgcctgt gatgttgcca cccgggcgcg caaggctgtc
     2761 gatgaggcgc gtcgcgaccg gatcaccggc tccaaagaag accaccgtcg gcacattcgc
     2821 caccttgcag gcgagcgtgg ttggaaagcc ggcggcgacg atcacatcca ctccgttagc
     2881 cttcatgctg ttgacaatct cgccaacttt gctgacctgg
//
LOCUS       DATDHO010000878         2164 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_90240, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000878 DATDHO010000000
VERSION     DATDHO010000878.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2164)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2164)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90240"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VIY07_17305"
     CDS             complement(<1..202)
                     /locus_tag="VIY07_17305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383548.1"
                     /translation="MTSASRKLQSILMTTAVAVGLGLSAPAGAEELRIGYLAPLTGGL
                     AQTGIDMRDGFLLYLEQHGNKLG"
     gene            complement(242..1237)
                     /locus_tag="VIY07_17310"
     CDS             complement(242..1237)
                     /locus_tag="VIY07_17310"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383549.1"
                     /translation="MGTQNFKIAVVVVSLLALLIVVPYCNSFIVLLVTRAMVFAILAM
                     SLDILLGFTGLASLGQAAYFGVGAYLTAILANNYGFGLKWDFWLMIPIGMAVGGALAA
                     FFGLFAIRATGTYFLMITLALGQCVWGLAYRWNSMTGGDNGLTMKGGRPQFGIDLSND
                     INFFYLTFAFFAATLLALYVLVRSPFGKSLLGIRERELRMRILGYNVWLHKYVAFIIA
                     GAFGGLSGVLWAHANGIVTPETVVLTTSVDALLMTVLGGAGTLVGGAIGSAIVFGLRE
                     YVSTLVPWWQYVLGGVYVLTILYLPTGLMGIPERIKQWRNSQKKHETAKMASAPS"
     gene            complement(1244..>2164)
                     /locus_tag="VIY07_17315"
     CDS             complement(1244..>2164)
                     /locus_tag="VIY07_17315"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383550.1"
                     /translation="FLLGGYVALSVIGTTGSWLLSIPIAALTIAVVGLIMERLFLRPE
                     GHAKLVRDAVIALGIALVIRLLIGPILPRLLPGQIGAIIQLTLVVIVLAIPVFLLLQR
                     ISAVAIEADVLRQVLMTVGFAFLFQQAALDIWGGNNFDIQPPSALTQSLVIGGIYLPL
                     YRLFMIVGALVIGIVLWLAMEKTRMGAAVRATVDDAQMARGVGIDTSKISMLIFALGA
                     GMAALGGVIGGAFLGVYPGLDFEMLPIAFAVVIIGGMGSLGGAAIGALLVGLADNFGK
                     ALFPELAYFTLYAPMVLILAIKPTGLFGRD"
BASE COUNT          521 a          651 c          633 g          359 t
ORIGIN      
        1 cgccaagctt gttgccgtgc tgctcaaggt agagcaaaaa gccatcgcgc atatcgatgc
       61 cggtttgcgc gaggccaccg gtgagcggcg cgagatagcc gatgcgaagt tcttccgcgc
      121 cggcgggagc ggacaggccg aggccaaccg ccaccgccgt ggtcatcaat atcgattgta
      181 gctttcttga cgcgcttgtc atttgtcgtt cctccagttg gtcaaggcct ttccgttcaa
      241 ctcaagaagg cgcagatgcc attttcgccg tctcatgttt cttctgactg ttccgccatt
      301 gtttaatccg ctccggaatc cccatcagcc cggttgggag ataaaggatc gtcagaacat
      361 aaaccccgcc cagcacatac tgccaccacg gcaccagcgt gctgacatat tcacgaagcc
      421 cgaacacgat tgccgagccg attgcgccgc cgaccagcgt cccggcgccg cctagaaccg
      481 tcatcagcag tgcgtcgacc gacgtcgtca acaccacggt ttccggcgtc acaatgccgt
      541 tggcatgtgc ccacagcacg cccgacaaac cgccgaaagc tccggcgatg atgaaagcaa
      601 cgtacttatg cagccacaca ttatagccga gaatgcgcat gcgcagttcg cgttcgcgga
      661 tgcccagcag gctcttgccg aatggcgagc gaaccaggac gtaaagcgca agcaaagttg
      721 ccgcgaaaaa tgcgaaggtg agatagaaaa agttgatatc gttggagagg tcgatgccga
      781 attgcggtcg accgcctttc atcgtaaggc cgttgtcgcc gccggtcatc gaattccatc
      841 ggtaggcaag gccccacacg cactggccga gcgctagcgt gatcatcaaa aagtaagtac
      901 cggtcgcgcg gatcgcgaac aggccgaaga atgccgcgag cgcgccgccg accgccatcc
      961 ctatcgggat catcagccag aaatcccatt tcagcccaaa gccgtaatta ttggcgagaa
     1021 tggcggtgag ataggcgccg acaccgaaat atgcggcttg gcccagcgag gcgaggccgg
     1081 tgaagccgag gagaatgtcg aggctcatcg ccaaaatagc gaaaaccatt gcgcgcgtca
     1141 ccagcaatac gatgaaggaa ttgcagtagg ggacgacgat cagcaaggcg agcaggctga
     1201 cgacgacgac cgcgatcttg aagttttgtg ttcccatgtt cagtcagtcc cgcccgaaga
     1261 ggccggtcgg cttgatcgcg aggatcagca ccatcggcgc atagagggtg aaataggcca
     1321 gttcgggaaa cagagccttg ccgaaattat cggcgaggcc gaccagcaac gcaccgatcg
     1381 ctgcgccgcc gagcgagccc atgccgccga tgatgacgac cgcaaaagcg atcggcaaca
     1441 tctcgaaatc gaggcctgga tagacaccaa gaaaggcgcc gccgatcacg ccaccgagcg
     1501 cggccatgcc ggcgcccagc gcaaagatca gcatcgagat cttgctggta tcgataccga
     1561 cgccgcgcgc catctgcgcg tcgtccacgg tagcgcgcac cgcggcaccc atccgtgtct
     1621 tttccatcgc cagccaaagg acaataccga tgacgagggc tccgacgatc atgaacagtc
     1681 ggtagagcgg caggtaaatg cctccaatca ccagactttg cgtcagcgcg ctcggcggct
     1741 ggatgtcgaa attattgccg ccccagatgt cgagcgcggc ctgttgaaac aggaacgcga
     1801 agcccacagt catcaacacc tgtcgcaaca cgtcggcttc gattgcaacg gccgatatac
     1861 gttgcaaaag caggaaaacg ggaatggcca ggacgatcac gaccagcgtg agctgaatga
     1921 tggcgccaat ctggccgggc agcagtcgtg gtaggattgg gccgatcagc agccggatca
     1981 cgagcgcgat cccgagcgcg ataacggcgt cgcgcacgag cttggcatga ccttccggtc
     2041 gcaggaacaa gcgctccatg atcaagccga caacagcgat ggtgagcgcc gcaattggta
     2101 tcgacagcaa ccaggagccc gttgttccga taacggagag ggcgacgtag ccgccgagca
     2161 agaa
//
LOCUS       DATDHO010000879         5294 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_440612, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000879 DATDHO010000000
VERSION     DATDHO010000879.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5294)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5294)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5294
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_440612"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(89..265)
                     /locus_tag="VIY07_17320"
     CDS             complement(89..265)
                     /locus_tag="VIY07_17320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HEY6383551.1"
                     /translation="MLKWAVIFLIIAVIAGIFGFADIEAASAMIAKWLFGIFILLVLG
                     ALIIGLTVGAKLTS"
     gene            complement(347..1825)
                     /locus_tag="VIY07_17325"
     CDS             complement(347..1825)
                     /locus_tag="VIY07_17325"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HEY6383552.1"
                     /translation="MSPRSRKSGTFVEQHRLRDNAQAKAAEQVERIIRKEKLEVVRFS
                     FADQHGVLRGKTLVAAEAVQAMSAGVTMTTTLLAKDTAHRTVFPVFTPGGGFASQEME
                     GGGDFVMVADPSTFRILPWANKTGWLLCDIYFTNGKPVPYSARARCRDALATLAKAGF
                     DFLAGLEVEFHLFKIEDPRLRPSDATWPPEAPEVSLLTQGYQYLTESRFDMLDPAVEI
                     LRRGIEQLGLPLRSIEVELGPSQCEFTFSPLAGLASADAMVLFRAAVKQIARRNGYLA
                     SFMCRPALPNVMSSGWHLHQSLVERKGARNAFAFDHADMLSTVGKYYLGGLLAHARAA
                     AAFTTPTINGYKRYRAYSLAPDRAIWARDNRGVMVRVIGQPGSPATRLENRVGEPAAN
                     PYLYVASQIYSGLDGIARKLDPGPSADTPYEVAAPLLPKNLNEALTALRSDEALRTGF
                     GTNFVDYYLHIKAAEFERFQKEAGDERADVTSWEQKEYLDLF"
     gene            complement(1920..3227)
                     /locus_tag="VIY07_17330"
     CDS             complement(1920..3227)
                     /locus_tag="VIY07_17330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HEY6383553.1"
                     /translation="MLSAEQNDFMTRTGPGTPAGGLMRRYWQPAALVDELSGNRPVKA
                     VRLFGEDLVIFRDEQGRYGLIGRRCPHRGTDLAYGRLEDGGLRCAFHGWLFDVHGKCL
                     EAPAEPDDSNLCANIRQKAYPVVEKSGILFAYLGQGEPPAFPHFDCFIAPDSHTFAFK
                     GMIDCNWLQSLEVGIDPVHTSFLHRFFHDEDPSQGYGKLFRDTSRDSDMPMSRIMREV
                     TRPRIEVEPTDFGFRLVTLRQISERSTHVRVTNLMFPNAFVIPMSREMTITQWHVPVD
                     DEKHYWYAIFTSFGAAVDKGEMRRQRLALYQLPDYIPNKNKSNDYGFDPHEQEHDTYT
                     GMGADINVHDQWACESMGAIQDRTSEHLGTSDKAISAYRKLLRQAIEQSTKGERPIMV
                     LDPARAASITGPAAIDGIGPADDWQDYWQKSEASKRQGASWGA"
     gene            complement(3350..3715)
                     /locus_tag="VIY07_17335"
     CDS             complement(3350..3715)
                     /locus_tag="VIY07_17335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383554.1"
                     /translation="MVQTWSNWKRFPDAQSGEHVEAPIGPGVYEVRHTMTGRVVAFGH
                     SANVANALADLNLNDGNTFTRLFRKQPLVPRVADLEYRTCAAATRAEAKTAAQRLIGL
                     RQTAWRRRMDIGWATRQAN"
     gene            complement(3880..4716)
                     /locus_tag="VIY07_17340"
     CDS             complement(3880..4716)
                     /locus_tag="VIY07_17340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6383555.1"
                     /translation="MSHGTMKILALLAWTVAGIMHAVAQGAAPPAKPEMTQACPGLVA
                     SRPPFVEPAGLRLAALERDQVRISYVGHSTFLIESPQLVRIATDYSDWVKPPVLPDIV
                     TMNHAHSSHYTLSPEPGIKYVLHGWGENQKPARIDLQYKDVRVRNVPTNIRTFDGGTE
                     RHGNSIFIFEVANLCIAHLGHLHHTLTQQQLNEIGRVDIVLVPVDGSYTLDLDGMVEV
                     LHALKAPLMIPMHFFGAYTLDRFLQRVRQDWDVELAQIPSVVVSKTDLPPKPKLLVLP
                     GH"
     gene            complement(4842..>5294)
                     /locus_tag="VIY07_17345"
     CDS             complement(4842..>5294)
                     /locus_tag="VIY07_17345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383556.1"
                     /translation="NKAMQQSVARLSKEIASLKTSLEAANKSASSQIAKISERLNRES
                     ANITASIPTQQQTTPASAPLPPPRPEGASVDSAPRMAILTNWSIREMRDGYVYVQGHG
                     DIYQVVPGAPLPGLGPVEQIKRQDGRWLVVTPKGIIVSMRDRRYFEQF"
BASE COUNT         1070 a         1573 c         1576 g         1075 t
ORIGIN      
        1 ctgctcagac ctggcgcaat catatccgga acccagaagg aatttcgggg aacattccgt
       61 catagttacc gtcgccggaa atcgcctgtc aggacgtgag cttagcgcca accgtcagcc
      121 cgattatcag tgcaccaagg accagcagaa tgaatattcc gaacaaccat ttcgcgatca
      181 tagcggatgc ggcttcgatg tcggcaaagc cgaaaatgcc ggcgatcacg gcaatgatca
      241 ggaaaattac ggcccatttc agcatctgaa atgctccctg ttgacggact ctgctcccga
      301 taatgggcag gaccgccgcc aagttccggc gtgactgcgg acggcatcag aacaagtcca
      361 ggtattcctt ttgctcccag gatgtgacat cggcgcgttc atcgcccgct tccttctgaa
      421 agcgctcgaa ctcggcagcc ttgatgtgca ggtagtagtc gacaaagttg gtgccgaaac
      481 cggtgcgcaa ggcctcgtcc gaacgcagcg cggtgagagc ttcgttcaga ttcttcggaa
      541 gcagcggagc agccacttca tagggagtgt ctgctgacgg tccgggatct agcttgcgcg
      601 caatcccatc aagaccggaa tagatctgcg acgccacata caaatagggg ttggcggcgg
      661 gctcgccgac acggttctcg aggcgtgtgg caggactgcc tggttgccca ataacgcgca
      721 ccatgacgcc gcgattgtcg cgcgcccaga tggcacgatc aggggccagc gagtaagccc
      781 gataccgctt gtagccgttg atcgtcggcg tagtgaaagc ggcagcggcc cgcgcatggg
      841 ccagcaaccc gcccagatag tacttgccca cggtggagag catgtccgcg tggtcgaaag
      901 caaatgcgtt gcgcgcgcct ttccgttcga ccagggactg atgcagatgc cagccgctgg
      961 acatcacatt gggcagggca ggccggcaca tgaagctagc gagataacca ttccggcgcg
     1021 cgatctgctt aaccgcagcc cggaacaaca ccatggcgtc ggcgcttgcg agtccggcca
     1081 gcggcgaaaa agtgaattcg cattggctgg ggccgagctc gacctcaatc gaacgaagcg
     1141 gcaggccaag ctgctcgatg ccgcggcgga gaatctcgac tgccggatcc agcatgtcga
     1201 accgtgactc ggtgagatac tgatagcctt gcgtcagcag gctgacctcg ggcgcttccg
     1261 gcggccaggt ggcgtcagag ggcctcagac gcggatcctc aatcttgaaa agatggaatt
     1321 cgacttccag ccccgccagg aaatcgaagc cggctttggc cagcgttgcg agagcgtcgc
     1381 gacagcgtgc acgggcggaa tacggcaccg gcttgccgtt cgtgaaatag atatcgcaca
     1441 acagccaacc tgttttgttg gcccaaggga gaatcctgaa tgtcgagggg tcggcgacca
     1501 tgacgaaatc gccgccgcct tccatctcct ggctggcaaa gccgcctccc ggcgtgaata
     1561 ccggaaagac tgtgcggtgc gccgtatcct tggcgagcag ggtcgtcgtc atggtaacgc
     1621 ccgcactcat cgcctggacc gcttcggcgg caactaatgt ctttccgcgc aatacaccgt
     1681 gctggtcggc gaaggaaaag cgcacgacct ccagtttttc ttttctgatg atgcgctcga
     1741 cttgctcggc ggccttggcc tgcgcgttgt cccgcagtcg atgctgctcg acaaacgtcc
     1801 cagatttacg cgagcgtggg gacattgtca ttggcgaata gtgatgagcg agtagcgaat
     1861 agaaagaagc atgataacga tttcgctttc ctattcctta ctcgctgctc gctatccgct
     1921 cacgcgcccc agctcgcgcc ctggcgcttg ctcgcttcgc ttttctgcca atagtcctgc
     1981 cagtcgtcgg ccgggccgat accatcgatc gcggccggac ctgtgatgct cgccgcccgc
     2041 gcgggatcga gcaccatgat cggtctctcg cctttcgtgg actgctcaat tgcttgccgc
     2101 agcagctttc gataggcgct gatcgccttg tcggaggtgc cgagatgttc actggtgcga
     2161 tcctgaatcg cacccatcga ctcgcatgcc cattgatcgt gcacgtttat gtcggcaccc
     2221 atccccgtgt acgtgtcgtg ctcctgctcg tgcggatcga acccgtagtc gttgctcttg
     2281 ttcttgttcg gtatgtagtc gggcagctgg taaagcgcga ggcgctgacg gcgcatctcg
     2341 cccttgtcga ccgcggcacc gaagctggta aagatcgcat accagtagtg cttctcgtca
     2401 tcgaccggca cgtgccactg cgtaatcgtc atctcgcggc tcatcgggat gacgaacgcg
     2461 ttgggaaaca tcagattggt cacgcgcaca tgcgtgctgc gttcgctgat ctgtcgcagc
     2521 gttaccagcc tgaagccgaa gtccgttggc tcgacctcga tgcgcgggcg cgtgacttca
     2581 cgcatgatgc gcgacatcgg catgtcggaa tcgcgcgaag tgtcacgaaa caattttccg
     2641 taaccctggc ttggatcctc gtcgtggaag aagcgatgca ggaatgacgt gtgcaccgga
     2701 tcgatgccca cctcgagcga ctgcagccag ttgcaatcga tcattccctt gaacgcgaaa
     2761 gtgtggctgt cgggcgcgat aaaacagtcg aaatgcggga acgcgggcgg ctcgccctga
     2821 ccgagatagg cgaaaagaat cccgctcttt tcaacgaccg gatacgcttt ctgccggatg
     2881 ttggcgcaca ggttgctgtc atcgggctcg gccggcgcct ccaggcattt gccgtggacg
     2941 tcgaacagcc acccgtgaaa cgcacaacgc aagccgccgt cttccaatcg tccgtacgcg
     3001 agatcggtgc cgcgatgggg acagcgacgg ccgatcaacc cgtagcgtcc ttgctcgtcc
     3061 cgaaagatca ccagatcttc gccaaacaag cgtaccgcct tgaccgggcg attgccggaa
     3121 agctcatcaa ccaatgcggc cggctgccaa tagcgccgca tcagaccgcc cgccggcgtg
     3181 cccggtcccg tccgcgtcat gaaatcgttc tgttccgcgc tcaacatggc catatccctt
     3241 cgcgggacga ctttatacga agtcgatgag cagctgaaag tcgcgagcaa gagccgcaaa
     3301 aacgaagcgg ccggcaacgc agccggccgc aactccgctc aattccgagt taattggcct
     3361 gccgtgtggc ccaccctatg tccatacgac ggcgccaggc ggtctgacgc aggcctatca
     3421 gccgttgcgc cgccgtcttt gcttccgcac gggtcgccgc cgcgcacgtg cgatattcga
     3481 gatcagcgac acgcggcacc aatggctgct tgcggaagag ccgggtgaat gtgttgccat
     3541 cgtttaggtt cagatcggca agcgcattgg ccacgttggc ggaatggccg aatgcaacga
     3601 cccgacccgt catggtgtgt cggacttcgt agaccccggg accgatcggc gcttcgacat
     3661 gttcgccgct ttgcgcatcg ggaaaacgtt tccagttact ccaagtctgc accattaaaa
     3721 gcccccctaa tatcttaaaa aaagagcggt cccagaacgc gagaactaaa cattggttcc
     3781 gccacgtcaa tagcggctgt tgataatttg gcgccgcgct taattctggc ggttaatgtg
     3841 gatttggccg cagttaatct tgaccggtta acgcggcggt taatggccgg gcagcacaag
     3901 caacttcggc ttcggcggga ggtccgtctt cgacaccact acagatggaa tttgcgcgag
     3961 ttccacatcc caatcctgcc gcacgcgctg aaggaagcga tcgagcgtat acgcaccgaa
     4021 aaaatgcatt ggaatcatca gcggcgcctt gagcgcgtgc agcacttcga ccatcccatc
     4081 gagatcgagc gtgtatgaac cgtccaccgg caccagcaca atatccacgc gaccgatttc
     4141 gttgagttgc tgctgcgtca acgtgtgatg cagatgaccg aggtgcgcga tgcacagatt
     4201 ggcgacttcg aagatgaaga tcgaattgcc gtggcgctcg gtgccgccat cgaaggtgcg
     4261 gatgttggtc gggacattcc gtacgcgaac gtccttgtat tgcaagtcga tccgggcagg
     4321 cttctggttc tccccccatc catgcagcac atatttgatg cctggctccg gagacaacgt
     4381 gtaatgcgat gaatgagcgt gattcattgt cacaatgtct ggaagtacag gtggcttcac
     4441 ccaatcactg taatcggtcg cgatgcgcac gagttgcggg ctttcgatca aaaacgttga
     4501 atgccccaca tagctgatgc gcacctggtc gcgctcgagc gccgcaagtc gcagcccggc
     4561 gggttcgacg aagggtggcc gcgaggcaac caggcctgga caagcttgcg tcatttcggg
     4621 cttcgccggc ggtgccgcgc cctgcgcgac agcgtgcatg atgcctgcga cggtccacgc
     4681 cagcagcgca aggattttca ttgtaccgtg ggacatgagt tcatccgcat cgattgggcg
     4741 cggatggaaa tctgacacgc tttcgtgggc ctcgccagca catcaggagc caacaaaaag
     4801 cggcgccggg aaggcgccgc tctttttagt tgtatggctt ttcagaattg ctcgaaatac
     4861 cggcggtccc gcatggagac gatgatcccc ttcggagtga cgaccagcca gcgtccgtcc
     4921 tgccgcttga tctgttcgac cgggccaaga ccgggcaacg gcgcgcctgg cacgacctga
     4981 tagatatcgc catgaccctg tacataaaca tagccgtcgc gcatctcgcg aatcgaccag
     5041 ttggtcagga tcgccatgcg cggcgccgag tcgacagagg cgccttccgg cctcggcggt
     5101 ggcagtggcg cggaggcggg agtcgtctgc tgctgagtgg ggatggaagc ggtgatgttg
     5161 gcgctttcgc gattgaggcg ttcgctgatt ttcgcgatct ggctggatgc tgatttgttg
     5221 gcggcttcga ggctcgtctt gaggctggcg atttctttgc taaggcgcgc caccgactgc
     5281 tgcatcgcct tgtt
//
LOCUS       DATDHO010000880         2098 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_90358, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000880 DATDHO010000000
VERSION     DATDHO010000880.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2098
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90358"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..155)
                     /locus_tag="VIY07_17350"
     CDS             complement(<1..155)
                     /locus_tag="VIY07_17350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018239506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMR family transporter"
                     /protein_id="HEY6383557.1"
                     /translation="MAWLYLLLAGLFEVGWAIGLKYTEGFSRLLPSLLTIAAMALSLG
                     LLGLALR"
     gene            complement(180..1094)
                     /locus_tag="VIY07_17355"
     CDS             complement(180..1094)
                     /locus_tag="VIY07_17355"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY6383558.1"
                     /translation="MPDSRKTSDAATTAKLLVVLLAFAWGLNWIAAAVALRELSPWSL
                     RVAGSSIGAATLFLAVVITGHHLKVPRGEYVHVIIAGLFNVAAFQILSGFAQLSGATT
                     RAIIITYSMPIWTTVLSHFVLGERLNAIRWFAFALCVLGVTVLLWPLFADGVQPFVFY
                     SLGCALSWTVATVYVKWAKLTIEPLANAAWQLLFGLLFIIAGSFLFEGHPRIWPIDNN
                     TIFAVLFVGLFGVGLAHFLWWSIVARLPAITASLGSLLVPVIGVSASAIVLGERLTLP
                     DIVGFAMIFAAAACVLLQPNVRHDEMPE"
     gene            1421..1984
                     /locus_tag="VIY07_17360"
     CDS             1421..1984
                     /locus_tag="VIY07_17360"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEY6383559.1"
                     /translation="MAGQDPLISGMAGRYATALFELALEDKAVDAVKNDLDRFDALLT
                     ESADLHRLVRSPVFDADEQLKALSAILERAGITGLAANFLRVITTNRRLFAVRDMIRA
                     YRILVARHKGEMVAQVTVAEKLSDTNLDALRSTLTSVTGSKDVDLEIKVDPTIIGGLI
                     VKVGSRMVDSSLRTKLNSIKLAMKEAR"
BASE COUNT          491 a          604 c          625 g          378 t
ORIGIN      
        1 tgtcttagcg cgaggccgag cagaccgagg ctgagcgcca tcgcagcaat ggtgagcagc
       61 gacgggagca gccgggaaaa accctcggtg tatttcagtc cgatcgccca cccgacttca
      121 aacaatccgg cgagcaacag ataaagccac gccatgacgg ttctccttta atggcgtagt
      181 tactccggca tctcatcgtg acgcacgttg ggctggagca aaacgcaagc ggctgcagca
      241 aaaatcatcg caaacccgac gatgtcaggc aaagtgaggc gctcgccaag cacgatcgcc
      301 gatgcgctga cgccgatgac cggtaccagc aatgagccga gcgaagcggt gatcgccggc
      361 agccgggcga caatcgacca ccacaagaaa tgtgccagac cgacgccaaa aagtccgaca
      421 aagagcactg caaagatcgt gttgttatcg attggccaga ttcgcggatg accttcgaaa
      481 agaaacgagc ctgcaatgat gaacagcagg ccgaacaaca actgccacgc ggcattcgcc
      541 agcggctcga tcgtcagctt ggcccatttg acatacacag ttgcgacagt ccagctgagc
      601 gcacatccga gcgaataaaa gacgaacggc tgaactccat cggcgaacaa tggccataac
      661 aggaccgtca cgccaaggac gcacagtgcg aaggcaaacc agcggattgc attcaatcgt
      721 tctccgagaa cgaaatggct cagcacggtc gtccagattg gcatcgaata ggtgataatg
      781 atggcgcgcg ttgtcgcgcc gctgagttga gcgaagcctg agagaatttg aaaggcggca
      841 acgttaaaaa gccctgcgat tatcacgtgg acatactcgc cacgaggcac tttgagatgg
      901 tgcccggtga tgacgacagc gaggaacaat gtcgcggcgc cgatcgacga gcctgcgaca
      961 cgcaagctcc acgggctgag ctcgcgcaat gcaaccgcag ccgcgatcca gttcagaccc
     1021 caggcaaaag cgagcagtac gaccagcagc ttggccgttg tggcggcgtc gcttgtcttt
     1081 ctcgagtccg gcatgctgtt ggaaaccagg gcgagtggcg gcggggagcg gcactttgtc
     1141 cctgcccgct atagcgagga gcggctcgcg tggcgagtat tgcagcgatg caaatttgtc
     1201 gccgagcctt gcgccgggcg gtactcgcgc cccgactcaa aggatgtgcg cttattgcac
     1261 ggtcgttctc gctgtgttag ctacccgtcg atttcagggg gttcctgcgc gcttcccgcg
     1321 acgtccctgg cgatcggaat tccctcttga attccaatag gttgagtcgc cgttcgtgac
     1381 ggcgtttcgg cttgtgaatg aaatgtagcg agcgtcccag gtggcaggcc aagatcctct
     1441 catatccgga atggctgggc gatatgcgac ggcgcttttc gaattggcgc tcgaggataa
     1501 ggccgtcgat gccgtcaaga atgaccttga tcggttcgat gcgctattga ccgaaagcgc
     1561 cgatctccat cgcctcgtgc gcagtccggt attcgatgcc gacgagcagc tcaaggcgct
     1621 ttcggcgata cttgagaggg cgggcatcac cggactggcc gccaattttc tcagagtcat
     1681 caccaccaat cggcgactgt tcgcggtccg tgacatgatc cgcgcctatc ggatccttgt
     1741 cgcgcgccac aagggcgaga tggtcgcgca agtgaccgtc gccgaaaagc tgagcgatac
     1801 caatctcgac gcgctcagga gtacactgac gtcggtgaca gggagcaagg acgtcgacct
     1861 cgagatcaag gtcgacccca ccattatcgg cggcctgatc gtcaaggtcg gcagccgcat
     1921 ggtcgacagc tcgctccgca caaaactcaa ttcgatcaag ctagcgatga aagaggcccg
     1981 ctgatggata tccgtgccgc agaaatttcc gccatcctca aagagcagat caagaatttc
     2041 ggccaggagg cggaagtctc cgaagtcggg caggtgctct ccgtcggcga cggaatcg
//
LOCUS       DATDHO010000881         4553 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_390853, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000881 DATDHO010000000
VERSION     DATDHO010000881.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4553)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4553)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4553
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_390853"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="VIY07_17365"
     CDS             complement(<1..617)
                     /locus_tag="VIY07_17365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383560.1"
                     /translation="MVLDARLADAWARLPDYLGSHVLVSLTALALGLGISLPVAIASR
                     RRPILRGILLGLASVVQTIPGLALLALFYPLLLALAALSEHTLGKGFSALGFLPAVLA
                     LALYSMLPVLRNTVTGLNGIDARLGEAARVIGMRKWQLLRDIELPLALPVIMAGIRTS
                     AVWVIGTATLATPIGQTSLGNYIFTGLQTQNWVFVIFGCIAAALLA"
     gene            823..2529
                     /locus_tag="VIY07_17370"
     CDS             823..2529
                     /locus_tag="VIY07_17370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HEY6383561.1"
                     /translation="MLSVASALLSRLAPTEAISRRDALALAIISSLHLAALAVMAATE
                     LDFATKATFLLVWASLNFFWLALLRRPAIAALLSLAMVIGLILLSQFKYDKLMMTVNF
                     VDLMIIDPDTSAFLFTIMPSLRGPILVGALVAIPVLMVLWRIDPFRVRLRTSAVSGTL
                     CMSGVIAFSIAYPADLYGEFFNRDYVSKFARSGVEAIYEFALHGLLESDAVVAERLKA
                     PAAMCSAGGKLPHIILVHDESSFDITAAPGMKVPPGYRKHFQSFDGVPRKLVVEGAGG
                     PSWYTEYNVLTGLSARSYGRFATSVTRIAAGRVTRGLPNALSRCGYKTFSLYPFYGAF
                     LGSRGFQTTAGIERYLDMKDMKARGLERDSFYFDQATNIIARERRSGPLFLFVYTAAN
                     HFPWDSTFRPELTPNWRGLGNSPNIDEYIRRQTLSAKDYAALLDRLKREFPADSFLIV
                     RFGDHQPEFAYRIIDPSLGEAALARQLEIFDPRYYTSYYAIDAVNFKPVDLSSALKTL
                     EAPYLPLLVQEAAGVPLDPSFSEQKNILKRCHGLFYRCADGAEARRFNRLLIEAGLIK
                     GL"
     gene            2596..3447
                     /locus_tag="VIY07_17375"
     CDS             2596..3447
                     /locus_tag="VIY07_17375"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383562.1"
                     /translation="MAEIPAVTATNSRNATASGAAVALDDVVVAFNLAPAGIYTAVER
                     ATLHVGDGEFVAIVGPTGCGKSTLLNVTAGLLTPAAGKVNIFGKPLSALNLQAGYLFQ
                     SDALFPWKTAIENVAIGLHVAGAAADDARARSKEWLARVGLDAFADRYPHMLSGGQRK
                     RVGLAQVLIRDPKILLMDEPFGPLDAQTRQIMGNLLLDLWSADRKAVLFVTHDLEEAI
                     ALSDRVVIMSAGPAARIIGDWRVPLSRPRDTSEVKLDPAFHELHREIWQKLKAEVLKG
                     YARSEEA"
     gene            3519..4079
                     /locus_tag="VIY07_17380"
     CDS             3519..4079
                     /locus_tag="VIY07_17380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEY6383563.1"
                     /translation="MSKLRHLLAVAAGALLLAGTAHAAEVFTITSSAFKDGQLLPKKM
                     AGDNKANPNCVGENVSPQFSWTNVPAGTTSFALVMTDPEGRGTGVDHWIAYGIPASVT
                     SFAEGETSKPSDKYVGGIGTAKQSIYMGPCTPPGPPHHYTFVLIATDLDPKALPPGLT
                     KLELFDKLQGHVKGSTGIIGLFRNPY"
     gene            4118..>4553
                     /locus_tag="VIY07_17385"
     CDS             4118..>4553
                     /locus_tag="VIY07_17385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383564.1"
                     /translation="MSRIKLLLLQVMVAVVSIALWYVLTTYPVFGRLLLPPFFFSNPV
                     DVAKQVVTWFATGVIWKHLWVTLIEAILAFVIGSIAGVLVGFWFARQPRVAAVFDPYV
                     KMANALPRVVLAPIFALWLGLGIWSKVALGFTLVFFIVFFNVY"
BASE COUNT          846 a         1359 c         1380 g          968 t
ORIGIN      
        1 gccaacagcg cagcggcgat gcagccaaag atgacgaaca cccaattctg cgtctgcagg
       61 ccggtgaata tgtagttgcc gagactcgtt tgaccgattg gtgtggctag cgtggccgtg
      121 cctatcaccc atacggcgga ggttctgatg ccggccatga tcaccggtaa ggccaacggc
      181 agctcgatgt cgcgcaagag ttgccatttc cgcatcccga tcactcgcgc cgcctcgcct
      241 aggcgagcat cgatgccatt caggcctgtc accgtgttgc gcagcaccgg aagcatcgaa
      301 tacagcgcaa gcgccaggac cgccggaagg aaaccgagcg ctgagaatcc cttgcccagc
      361 gtgtgctcag aaagggcggc gagcgccagc aacagcgggt agaacaaggc cagcagcgcc
      421 aggccgggga ttgtctgcac cacgcttgcc agacccagca ggatgccacg caggatgggc
      481 cggcgcctgg aggcgatggc aaccggaagg ctgatgccaa gcccaagggc cagggccgtc
      541 aggctaacca gcacatggct gcccagataa tcgggcagcc gggcccaggc atcggcgagg
      601 cgggcgtcga ggaccatgcc gggcaatgat ggcatgcgag gctatggagc gggaacgccc
      661 ctaccgacgc ctcccgcgcc catctctttg ggttaacatc gaaaaagccg accggccggg
      721 ccaaccgcag cttgcattgg cggttttatt acagtcttat gacgctaggg ccatgcgctg
      781 ggggagttag agaggatcgc agccgggcag ggccgtaagg ccatgttgtc cgtagcgtcc
      841 gctctgctca gccgtctggc gccgaccgag gcgatctccc gccgcgacgc actggcgctt
      901 gctatcatca gcagccttca tctcgccgcg ctcgccgtca tggcggcgac cgaacttgat
      961 tttgcgacca aggcgacctt cctgctggta tgggcctcgc tgaatttttt ctggctggcg
     1021 ttgctgcgcc ggccagcgat tgcggccttg ctttccctgg cgatggtcat cgggctcatt
     1081 ctgttgtcgc agttcaagta cgacaagctg atgatgacgg tgaacttcgt cgacctgatg
     1141 atcatcgatc cggatacatc ggcatttctc tttacaatca tgccgagcct gcgagggccg
     1201 attttggtcg gtgcgcttgt cgccattccc gtgcttatgg tgctttggcg gatcgatcct
     1261 ttccgggtgc ggctgcgcac aagcgccgtg agcggcactt tgtgcatgag cggcgtcatc
     1321 gccttttcga ttgcgtatcc agccgacctg tatggcgagt ttttcaaccg ggactatgtg
     1381 tcgaaattcg cgcgctcagg cgtggaggcg atctatgagt ttgcgttgca cggcttgctg
     1441 gaatccgatg cggttgtggc cgagcggttg aaggcgcctg cggcgatgtg cagcgccgga
     1501 ggaaagttgc cgcacatcat tctggtgcac gatgagtcga gcttcgacat caccgctgcg
     1561 ccgggcatga aggtcccacc gggttatcgg aaacactttc agtctttcga cggcgtgccg
     1621 cgcaagctgg tcgtggaagg tgccggcggt ccgagctggt acacggaata taatgtgctg
     1681 accggtctgt cggcgcgttc atatggccgg tttgccacct cagtgacacg catcgcagcg
     1741 ggccgcgtca cgcgcggcct gccgaatgcg ttgagccggt gtggctacaa aaccttcagc
     1801 ctttatccgt tctacggagc atttctgggc tcgcgcggtt ttcagacgac ggcgggcatc
     1861 gagcgctatc tcgatatgaa agatatgaag gcccgtggac tcgagcgcga cagcttctac
     1921 ttcgaccagg cgaccaacat catcgcccgt gaacgccgga gcggcccgct gtttctgttc
     1981 gtctacaccg cagccaatca tttcccgtgg gattcaacgt tccggccaga gctcacgcca
     2041 aactggcgcg gcctgggcaa ttcgcccaac atagacgagt acatccgccg gcagacgctc
     2101 agcgcgaagg actatgcggc gctgttggat cgcctcaagc gcgaattccc ggccgactct
     2161 ttcctgattg ttcgtttcgg cgatcatcag cccgaattcg cgtatcgaat aatcgacccg
     2221 tccctcggcg aagctgcgct tgcgcgacag ctggaaatct tcgatccgcg ctactacacc
     2281 agttattatg cgatcgacgc cgtgaatttt aagccggttg atttgtcctc ggctttgaag
     2341 acgcttgaag cgccgtacct tccgctactg gtgcaggagg ctgcaggggt gccgctcgat
     2401 ccgtcttttt cggagcagaa gaacatcctg aaacgctgcc acggcctgtt ctatcgttgc
     2461 gccgatggtg ccgaggcgcg acggttcaat cgcctgctga ttgaggccgg cctgatcaaa
     2521 ggcctttgat gcgcgggctt tgcaagccct ggctggccgg ataggttgcg cccaagaaaa
     2581 agcgggaggg gattcatggc ggaaattccc gccgtgactg caaccaattc cagaaatgcg
     2641 acggcgtccg gcgcagctgt tgcgctcgat gatgtcgttg tcgcatttaa cctggccccc
     2701 gccggtatct acacggccgt tgaacgcgca acacttcatg tcggagacgg cgaatttgtt
     2761 gcaatcgtgg gcccgacggg ctgcggcaaa tccacgctgc ttaatgtgac cgccgggttg
     2821 ctcacgcctg ccgcaggcaa ggtcaatatt tttggcaagc cgctgtccgc cctgaacctg
     2881 caggccggtt atctgttcca gagtgacgca ctctttccgt ggaagacagc catagagaac
     2941 gttgcaatcg gcctgcacgt cgccggcgca gctgcagacg acgcgcgggc acgctcgaag
     3001 gaatggcttg ctcgcgtcgg cctcgatgca ttcgccgacc gttatccgca tatgttgtcc
     3061 ggtggacagc gcaagcgcgt cgggcttgcg caggttctga tccgtgatcc gaagatcctg
     3121 cttatggatg agcccttcgg tccactcgac gcccaaacgc gccagatcat gggcaacctg
     3181 ctgctcgact tgtggagcgc ggaccgcaag gcggtactgt tcgtcacaca cgatctggaa
     3241 gaggcaattg ccttgtccga ccgggtcgtg atcatgtccg caggacccgc tgcgcgcatc
     3301 ataggcgact ggcgcgtccc gctctcgcgg ccgcgcgaca cgtccgaggt taagctcgat
     3361 cccgcattcc acgaactcca ccgcgagatc tggcagaagt tgaaagctga agtcctcaag
     3421 ggctacgccc gcagtgagga agcctgatgc gcgtggaatt ttgttgagct agtcttgttt
     3481 gtcataacga tgtccaacaa catcgatggg agaaggcaat gtcgaaactg cgtcatctgc
     3541 tcgccgtcgc tgccggtgct ttgctgctgg cgggcaccgc tcacgcggcc gaagttttca
     3601 cgatcacgtc ctcggctttc aaggacgggc aattgctgcc gaagaagatg gctggtgaca
     3661 acaaagccaa tccgaattgc gtcggcgaaa atgtgtcgcc tcagttttcc tggacgaatg
     3721 tgccggccgg caccaccagc tttgcgctgg tcatgaccga tccggaaggc cgcggcactg
     3781 gcgtcgacca ctggatcgcc tatggcatcc cggcgtcggt cacgtctttc gcagaaggtg
     3841 aaaccagcaa gccatcggac aaatatgtcg gtggcatcgg cactgcgaag caaagcatct
     3901 atatgggccc ctgcacacca cctggaccgc cgcaccacta caccttcgtg ctgatcgcaa
     3961 ccgatctcga tccaaaggcg ctgccgcccg gtctcaccaa gctggagctg ttcgacaagc
     4021 ttcaaggcca tgtgaagggc tcgaccggca ttatcggcct gttccgcaac ccgtactgac
     4081 cttgttgtaa cctggcaaag aggaggagtt gatcgcaatg tcgcgcatca agctcctcct
     4141 gttgcaggta atggtggcgg tggtgagcat cgcgctctgg tacgtgctca ccacttaccc
     4201 cgtcttcggc aggcttctgc tgccgccttt cttcttttcc aatccggttg atgtggcgaa
     4261 acaggtcgtt acctggtttg cgaccggtgt gatctggaag catctttggg tgacgctgat
     4321 cgaggccata ctggctttcg tcatcgggtc gatcgcgggc gtactggtcg gattctggtt
     4381 cgcgcgccag ccacgggtag ccgcggtctt cgacccttat gtaaaaatgg cgaacgcgct
     4441 cccgcgcgta gtgttggcgc cgatctttgc gctttggctt ggcctcggga tctggtcgaa
     4501 ggttgcgctc ggcttcaccc tggtcttctt cattgtgttc ttcaacgtct atc
//
LOCUS       DATDHO010000882         4854 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_241083, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000882 DATDHO010000000
VERSION     DATDHO010000882.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4854
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_241083"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..299
                     /locus_tag="VIY07_17390"
     CDS             <1..299
                     /locus_tag="VIY07_17390"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEY6383565.1"
                     /translation="AGYANYGRNRARSLFYDGEIYEIYLRPEFQGLGFGRRLFSAARK
                     DLNQSGLKSLVVWALSDNEPAMEFYRALGGRAVARSSERFGAKTLDKVAYAWQA"
     gene            complement(300..1184)
                     /gene="folD"
                     /locus_tag="VIY07_17395"
     CDS             complement(300..1184)
                     /gene="folD"
                     /locus_tag="VIY07_17395"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEY6383566.1"
                     /translation="MSARIIDGKTIAADLRGKVSDAVHRLRRDRGVVPGIAVVLVGDN
                     PASEVYVRTKSRAVADSGMRAFDYKLPASASEAELLDLVAKLNADEEVSGILVQLPLP
                     KQIDAQKIIAAMDPAKDVDGFHPVNAGRLAIGLPALVPCTPLGCILLAKAVHETLAGM
                     EAVVVGRSNIVGKPVAQLLLAENATVTVTHSRTNDLPSVCRRADLLVAAIGRPEMVRG
                     DWIKPGGTVIDVGINRVPLEGGKSGVVGDVAYAEATQVAGAITPVPGGVGPMTIACLL
                     LNTLRAACAQKGLPAPKV"
     gene            complement(1251..1490)
                     /locus_tag="VIY07_17400"
     CDS             complement(1251..1490)
                     /locus_tag="VIY07_17400"
                     /inference="COORDINATES: protein motif:HMM:TIGR00251.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 family protein"
                     /protein_id="HEY6383567.1"
                     /translation="MGAIESLPEGRTALIARVRAVPSEGEANAALVRLLAKALGVPRR
                     DIVLAAGASGRLKRLVITGDGPTIVAALERLSKTG"
     gene            complement(1602..1892)
                     /locus_tag="VIY07_17405"
     CDS             complement(1602..1892)
                     /locus_tag="VIY07_17405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEY6383568.1"
                     /translation="MRAILDIILLVLQIYIWLLIAAAVLSWLIAFNVVNTHNQVVATI
                     GEFLYRITEPLLRPIRSVLPNLGGIDVSPVILILIILLIENVIIRYIYPNVF"
     gene            2067..2142
                     /locus_tag="VIY07_17410"
     tRNA            2067..2142
                     /locus_tag="VIY07_17410"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2100..2102,aa:Ala,seq:cgc)
     gene            complement(2513..3016)
                     /locus_tag="VIY07_17415"
     CDS             complement(2513..3016)
                     /locus_tag="VIY07_17415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEY6383569.1"
                     /translation="MPKKLKKLDELFHDGLRDIYFAEKKILVALPKMAKAADSEELAN
                     AFREHEKQTKEQVNRLEKVFQLIDETPRGKNCPAITGILDEGEEIIEEFEDSPALDAG
                     LIGAAQAVEHYEIARYGTLKAWAEELGLEEAVSLLDATLNEEEETDEKLSELAESAIN
                     QKAEAAE"
     gene            3316..3777
                     /locus_tag="VIY07_17420"
     CDS             3316..3777
                     /locus_tag="VIY07_17420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383570.1"
                     /translation="MRDAAGETFSQASGTARDAGARTQRATEGSTSSLTDSVMGLLNQ
                     QLGAGADAAGRFASSMKLAAHDMGRDNPMLADLVRGLAHNVDGYADALENQTVEQLTK
                     AASDFTRRQPALVFRLAAVAGFLAFRTFKNAQSVPSPSIQPDHNPAGKTHG"
     gene            3770..4165
                     /locus_tag="VIY07_17425"
     CDS             3770..4165
                     /locus_tag="VIY07_17425"
                     /inference="COORDINATES: protein motif:HMM:NF018980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEY6383571.1"
                     /translation="MDEQLKYTSLPEAFSKVMTDLADLIQKEMRLARAELSAKLSIGI
                     RAGAWMFVAAFLATTAALLVVQACVLGLAAATGLALHWSSLIVAAVLAVIAGASFAKG
                     KADVPDQLVPDRAINQVKRDIEVAKEQFT"
     gene            4162..>4854
                     /locus_tag="VIY07_17430"
     CDS             4162..>4854
                     /locus_tag="VIY07_17430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383572.1"
                     /translation="MNGQSRLLGDGGERILNTIKRNPEGLLLLAAGVVLMMRTNASKS
                     SASPTDASGRRSGAQASERVKDAARQTMDTAQSYASSAAEAAQEAVDTARSYAASASD
                     MARETVETARSYASSATQYAGQARRAVGEQSERVVTQTRSMAQGIVQNQPLAIAATGL
                     AVGAALAAAFPPTQLERETLGPMGDRMSKAAERAGDQLKQATVKAGEKLKSAAGERGL
                     DRDDLKDVAREVA"
BASE COUNT          968 a         1484 c         1442 g          960 t
ORIGIN      
        1 ttgcgggtta cgccaattac ggacggaacc gcgcccgcag cctcttctat gacggggaga
       61 tctacgaaat ctatctgcgg ccggagtttc agggcctcgg tttcggtcgc cggctgtttt
      121 ccgccgcccg caaggacctg aaccagagcg gtttgaagag cctggttgtc tgggcgcttt
      181 ccgacaacga gcctgccatg gaattctatc gggcactcgg cggccgcgcg gtggcacggt
      241 cctcggagcg cttcggcgcc aaaacactcg acaaggtcgc ctacgcctgg caggcgtgat
      301 tacaccttcg gggccggtaa acctttctgc gcacaggcgg cgcgcagggt attgagcagc
      361 agacacgcaa tcgtcattgg tccaaccccg cccggcacgg gggtgatcgc gccagcgacc
      421 tgcgtggcct ccgcataggc gacgtcgccc accacgccgg attttccgcc ttcgagcggc
      481 acccgattga ttccaacgtc gatcaccgtg ccgcctggct tgatccagtc tccacgaacc
      541 atttcgggcc gaccaatcgc ggcgaccagc aggtcggcgc ggcggcacac ggacggaagg
      601 tcgttcgtcc tggaatgcgt caccgtcact gtcgcatttt cagccaagag caattgcgcc
      661 acaggcttgc caacaatgtt tgatcggccg acgaccaccg cctccatgcc ggcaagcgtt
      721 tcgtggacgg cttttgcgag aagaatgcag cccaatggcg tgcatggaac cagcgcaggc
      781 aagccaatcg cgagccggcc tgcgttcacc gggtgaaaac catccacgtc cttagccgga
      841 tccatcgccg caatgatttt ttgcgcgtcg atctgcttcg gaagcggcaa ctggaccaga
      901 atgccgctga cctcctcatc ggcgttgagc ttcgcgacga gatcgagcag ctccgcttcg
      961 ctcgcgctcg caggaagctt gtaatcaaag gcgcgcatgc ccgagtccgc tacagccctg
     1021 gacttggtgc gcacataaac ttcgctggcc gggttgtcgc caaccagcac cacggcaatg
     1081 cctggcacga cgccgcggtc gcgccgcaag cggtgaacgg cgtccgagac tttgccgcgc
     1141 aaatcggccg cgatggtctt gccgtcaata atgcgcgcgc tcatgttctg tcatcttacg
     1201 gtcggcgcta agcgagatgg ccgggactgg cccggccatg acaataactt ttatcccgtc
     1261 ttgctcaatc tctccagcgc cgcaacgatc gtcgggccat cgcccgtaat cacaaggcgc
     1321 ttgagtcgcc cggaggcgcc agcggccaga acaatatctc gacgggggac ccccaacgcc
     1381 ttcgccagca atcgaacaag agcggcgttg gcctcgccct ccgatggaac cgcgcgcacg
     1441 cgcgctataa gtgccgttcg tccctccggc agcgattcta tcgcgccgat cgcgtcgcgg
     1501 gcgcctcggc gtaagcttga ttgtcagcac aacgccatcg gcgttcagga accatggttt
     1561 gagggccatg gtttgagggc catggcttga ggcccgcgac cctaaaacac gttcgggtag
     1621 atgtagcgga tgatgacgtt ttcgataagc aagatgatca ggatcagaat caccggcgag
     1681 acgtcaattc cgccaaggtt gggcagcacc gagcggatcg gccgcaatag tggctcggtg
     1741 atgcggtaga gaaattcgcc gatggtcgcc acaacctggt tgtgcgtgtt gaccacattg
     1801 aatgcgatca accaggacag gactgcggcc gcgatcagaa gccagatata aatctgcaag
     1861 accaacagaa taatatcgag tatggcgcgc attgctgtcc gcccctttgc aaccggcgcg
     1921 caaactagcg gttcgattgg cctcaaacaa gacgaccgca ggtcgcgtcg cggatatccg
     1981 tgtgcttgac aggcaaaata cctggcccta aatggccctc actcgccgca atttctgcat
     2041 gacgacgctt gtcgttgctg tttggcgggg ccgtagctca gttgggagag cgcctcgttc
     2101 gcaatgagga ggtcaggggt tcaaatcccc tcggctccac cacctaactt ctgcattgcc
     2161 tttgctccga cttgtgccgt tcacggattg catgggcaca ggtacgcctg cgcacgctcc
     2221 gtctgtgttg agatcgtaaa tgtccggtca cggccttcaa cgcgccgatg ttcggccacg
     2281 ttcgtcggct acatcgcgtg tgccggccgt cggcgcggtt gcgattttcc ttggggacgg
     2341 acccgcaacc cttgggacgg ggttcaccgg cgaccggcat gttttaggta ggaagccacc
     2401 ggcggcagcg ccaggggcag atactgatac cgcgtatggc tcgaagccat ggcaaaccgg
     2461 gccgccctgc catgccaggc gcccggtcct cggatggctt tccctcaggc ttttactcgg
     2521 ccgcctcggc cttttggtta atcgcgctct ctgcaagctc ggacaacttt tcatccgtct
     2581 cttcttcttc gttgagcgtc gcatccagga gagacacggc ttcctcgaga ccaagctcct
     2641 ccgcccaggc ctttagggtg ccgtaacgcg cgatttcgta gtgctcgacg gcttgtgcgg
     2701 cgccgataag gccggcatcc aatgcaggcg aatcttcgaa ttcctcgatg atctcctcgc
     2761 cttcatcgag gatgccggtg atcgccggac aattcttgcc gcgcggggtc tcgtcgatca
     2821 gctggaacac tttttccagc cgattgacct gttcctttgt ctgcttctcg tgttccctga
     2881 aggcgtttgc caattcttcc gagtcggctg ccttggccat cttggggagg gcgacgagga
     2941 ttttcttttc tgcaaagtag atgtccctga gcccgtcgtg aaacagttca tcaagcttct
     3001 ttagtttttt gggcatggcg cgttcctccg tctttttgtg ttctcaggca aacgtcgcgc
     3061 acacaccaat tgtttcactt tcgacggagt aatcagcatt tcgttttgag aaccaagcgc
     3121 gctgcgcacc gcgcagctat gtcaaaagat attcttcgtg cacgcattca aatgtcggca
     3181 ccaagaaaaa acgaacagca ggaaccaagg tttgtcccgc atgtttgatg aacaggagga
     3241 agaccgatga gttaccagga tttcgagggc actgagtcag gttccacagg agaccatcaa
     3301 gcacgaaaca aaaaaatgcg tgacgccgct ggggaaacgt tttcgcaggc ttctggcacc
     3361 gcgcgggatg ccggagcaag aacccaacga gccacggagg gttcgacgtc gtcactgacg
     3421 gacagcgtga tggggctgct caatcagcag ctcggtgccg gcgcggatgc agcgggccgg
     3481 tttgcgagct ccatgaagtt ggccgctcac gacatgggac gggacaatcc aatgctggcc
     3541 gatctggtgc gcgggctagc gcacaatgtg gatggctatg ccgacgccct tgagaaccag
     3601 accgtcgaac agctgaccaa agcagcttcc gacttcaccc gccgacagcc cgccctggtc
     3661 ttcaggctag ccgcagtcgc gggatttctc gcatttcgaa cattcaagaa cgctcaatcc
     3721 gtcccatcgc cgtcgatcca gcctgatcac aacccggcag ggaaaaccca tggatgagca
     3781 gctgaaatat acgtctctgc cggaggcctt ttccaaggtc atgacggatt tggccgacct
     3841 cattcagaaa gaaatgcggc tggcgcgagc cgagctatct gcgaaattat caattggcat
     3901 ccgcgccggc gcctggatgt tcgtcgcagc ttttctagca actacggcgg ccctgctggt
     3961 cgtgcaggct tgcgtcctcg gcctagccgc tgccaccggt ctggcgttgc attggagcag
     4021 tctaattgtg gctgccgttc tcgcagtcat tgccggagca tcgtttgcaa aaggcaaagc
     4081 tgatgtgccc gaccaactcg tacccgatcg tgccatcaac caggtaaaac gagacataga
     4141 agtagccaag gagcagttta catgaatggg caatcacgtt tgctcggcga tggaggcgag
     4201 cggatcctca atacgattaa acggaacccg gaaggtcttc tgctcctggc cgcgggcgta
     4261 gtacttatga tgcggacgaa tgcgtcgaaa tcttcggcga gcccgacgga cgcgtctggc
     4321 cgccgcagcg gggcccaggc gagtgagagg gtgaaagacg ccgctcgcca gaccatggat
     4381 acggcacagt cctatgcttc gtcggccgcc gaggccgccc aagaagccgt ggacacggct
     4441 cgctcctacg ctgcgtcggc gtcagatatg gcccgcgaga ccgtggaaac agcacgatcc
     4501 tatgcctcgt cggcaaccca gtatgccggt caggcccgac gcgcggtggg cgagcagtct
     4561 gagcgggtcg tcacgcaaac acgctcgatg gcccagggca tcgtgcaaaa tcagcctctc
     4621 gcgatcgcgg ccaccgggct tgccgttggt gccgccctgg ctgccgcctt ccccccgacg
     4681 cagctcgagc gcgaaacact cggcccgatg ggcgaccgga tgtcaaaggc cgcagagcgg
     4741 gccggcgatc agctgaaaca ggccacagtg aaagccggtg aaaagctcaa gagcgccgca
     4801 ggggagcgcg gcttggacag agacgacctg aaggacgtgg caagggaggt tgcc
//
LOCUS       DATDHO010000883         1893 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_194094, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000883 DATDHO010000000
VERSION     DATDHO010000883.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1893)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1893)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1893
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194094"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..176)
                     /locus_tag="VIY07_17435"
     CDS             complement(<1..176)
                     /locus_tag="VIY07_17435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEY6383573.1"
                     /translation="MPITLLDIILLMVMLISGLLAMIRGFMREILSIGAWGVAAVVTL
                     YSYSRVLPMAKQYFT"
     gene            complement(394..1803)
                     /gene="radA"
                     /locus_tag="VIY07_17440"
     CDS             complement(394..1803)
                     /gene="radA"
                     /locus_tag="VIY07_17440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEY6383574.1"
                     /translation="MSKRNLSFVCQNCGAAFSRWQGKCEACGEWNTLSEEGGDRPGGG
                     LGRKPGRGRLFALEALAGEAHDAPRLPCGIGELDRVTGGGFVRGSVLLVGGDPGIGKS
                     TLLIQATAAMARAGHRTVYISGEEAVAQVRLRAERLGLRDCNVELAAETAVEDIIATL
                     SEGTRPRLVVIDSIQTMWTDLVESAPGTVTQVRGAAQALIRFAKKSGAAVILVGHVTK
                     DGQIAGPRVVEHMVDAVLAFEGEGSHQFRILRAVKNRFGPTDEIGVFEMTGAGLHEVA
                     NPSELFLSERDLGQPGTAVFAGVEGTRPLLVEIQALVAPTSLGTPRRAVVGWDPNRLS
                     MVLAVLEAHCGVRLGGHDVYLNVAGGMRIQEPAGDLAAAAALVSSLANAPLPSDAVYF
                     GEVSLSGAVRPVAQAASRLKEAAKLGFKGAVVPEAGRGERSEAGLTVSEVGSLASLVA
                     DIAAGGRARMAAKTGGQYG"
BASE COUNT          387 a          622 c          563 g          321 t
ORIGIN      
        1 gtgaagtact gcttcgccat cggcagcacg cggctgtagg aatagagcgt gacgaccgca
       61 gcgacgcccc aagcaccgat tgacaggatc tcgcgcatga atccgcggat catggcaagg
      121 agccctgata tcagcatgac catcagcaaa atgatgtcga gcagcgtgat cggcatcgag
      181 ggctcatgcg ctccgcaggt ttttgcagtt cgtgccccac ctggccgtcg gcccgtgcga
      241 ggaatccgcg cccgccatag cggctacggg ccggggcggt aatgtcgacc ctaagtgttt
      301 aattttaggc ccatttctgc gtttcaactc gcgctgaaga cgcggctaaa gccggtttcg
      361 acgcgccgta tatagcggcc cattacggtc ccgtcacccg tattgtccac cagttttggc
      421 agccatgcgc gccctacctc cggcggcaat gtccgccacg agactggcaa ggctaccgac
      481 ttcactgact gtcagccctg cttcggaacg ttcgccccgg cccgcttccg gcacaacggc
      541 acccttgaag cccagtttgg cagcttcttt caggcgcgag gcggcctgcg ccaccggcct
      601 gacggcgccg gaaagcgaca cctcgccaaa atagacggcg tccgagggca ggggcgcatt
      661 ggctagcgag gatacaagcg cagccgcggc tgcaagatca cccgccggct cctggatgcg
      721 catgccgccg gcaacgttaa ggtaaacatc gtggccgccg agccgtacgc cgcaatgcgc
      781 ctcgaggacc gcgagcacca tcgacaagcg gtttgggtcc caacccacga ccgcacgccg
      841 gggcgtgcca agcgatgtcg gggcaaccag cgcctgaatt tccaccagca gcgggcgagt
      901 gccctcaacg ccggcgaaga cagccgtgcc cggctgcccg aggtcgcgtt cagacaaaaa
      961 cagctccgag ggattggcga cttcgtgcag gccagcgccg gtcatttcga acacgccgat
     1021 ttcatcggtc ggtccgaacc ggttttttac cgcgcgcaat atgcggaact gatgcgagcc
     1081 ttcgccttca aaggcaagca ccgcatcgac catgtgctcg acaacacgag gaccggcgat
     1141 ttgcccgtcc ttggtgacat gcccaaccag gatgaccgct gcgcctgact tcttggcaaa
     1201 acggatcagc gcctgtgcag cgccgcggac ctgggtcact gtgccgggag ccgactcaac
     1261 caagtcggtc cacatggtct ggatagaatc aatgacgacc agccgtggcc tcgttccttc
     1321 cgaaagggtc gcgatgatgt cttcgactgc agtttccgca gcaagctcga cgttgcaatc
     1381 gcgcaacccc aatcgctcgg cgcgcaggcg aacttgagcc accgcttcct caccggagat
     1441 atagaccgta cgatggccgg cccgggccat ggcggcggta gcttgaataa gcagcgtcga
     1501 cttgccgatg ccggggtcgc cgccgaccag cagcaccgat ccgcgcacaa agccaccgcc
     1561 cgtgacgcgg tcgagttccc cgatgccgca aggcagacgg ggggcgtcgt gggcctcccc
     1621 agccagcgcc tccagcgcaa aaagtcggcc cctgccgggc ttgcggccaa ggccgccgcc
     1681 tgggcgatcc ccaccttcct cgctcagggt attccattca ccgcaggctt cgcactttcc
     1741 ttgccagcgg ctgaacgcag cgccgcagtt ctggcaaaca aagctgaggt tgcgcttcga
     1801 catggggaat caatgtggaa aaccggtaaa acacggtagg cgaccgatga gaacaataca
     1861 agaacatttt ttaagaagta gctaacgatc agg
//
LOCUS       DATDHO010000884         3960 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_143738, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000884 DATDHO010000000
VERSION     DATDHO010000884.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3960
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143738"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(142..1056)
                     /locus_tag="VIY07_17445"
     CDS             complement(142..1056)
                     /locus_tag="VIY07_17445"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEY6383575.1"
                     /translation="MTISFPAGFPVRLRPAAFIGAALLLISGAWVYAQDKDPVVAKVN
                     GVEIHQSDLAVAEDEAGQIPPMSPEAKQDYLIQFVADMILVSKAAQDKKFGDTADFKR
                     KLEFARKKLLMEGLLQSVGKEALTDDAMHKVYDEAVKQIGEEKEVRARHILFRTPAGD
                     DKASKEAEDKVKAVITRLKKGEDFAKVAGEVTEDPSGKANGGDLGYFTKDQMVPEFAE
                     TAFKLESGQISDPVKTQFGWHVIKVEDKRTKQAPKFEDVKPQIENFVVRKAQADLVTK
                     LRADAKIERMDKPAKAEEKPAAAPPAKK"
     gene            1378..>3960
                     /gene="secA"
                     /locus_tag="VIY07_17450"
     CDS             1378..>3960
                     /gene="secA"
                     /locus_tag="VIY07_17450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEY6383576.1"
                     /translation="MISAVARKLFGSANDRRIRSYLPRVGEINALEKELESLSDDALK
                     ARTDEFKKQVAEGVSLEDILVPAFATVREASKRTLGQRHFDVQLIGGMILHEGKISEM
                     KTGEGKTLVATLAVYLNAIAGRGVHVVTVNDYLAKRDAEWMGQIYNFLGLSVGVIVHG
                     LDDEQRKKAYDCDITYGTNNELGFDYLRDNMKYRLEDMVQRGHIYAIVDEVDSILIDE
                     ARTPLIISGPLDDRSEFYNTIDSYIPQLDKADYEVDEKQRTVTLTEAGMEKLEQRLRD
                     AGQLKGDSLYDIENVSVVHHVNQALRAHKLFQRDKDYIVRNGEVVIIDEFTGRMMPGR
                     RYSEGLHQALEAKEHQPIQPENQTLASITFQNYFRMYEKLAGMTGTAMTESEEFMDIY
                     GLEVLEVPTNMPLIRLDDDDEVYRTAAEKYRAILTLIEDCKTRGQPVLVGTTSIEKSE
                     QLAEMLRQKGWEQHDFSDPNAFAALYSGDEGASKKKVFAILNARYHEQEAYIVAQAGV
                     PGAITIATNMAGRGTDIQLGGNPDMRIRQEISDIADQREREKSPRADEIRKQVARLKE
                     KALAAGGLFVLGTERHESRRIDNQLRGRSGRQGDPGHSKFFLSLEDDLMRIFGSDKLD
                     GMLQKLGLKENEAIVHPWINKALEKAQQKVEARNFDLRKNVLKYDNVSNDQRKVIFDQ
                     RVELMRDETVAETIGDMRHAVIDDLVAKHVPENAYPEQWDTAGLKEQLNRVLGLELPV
                     DEWAKEEGIADEELLARVERRADEHMAAKVAQWGPDVLRYVEKSILLQTLDQLWREHL
                     VMLEHLRQVIGLRGYGQRDPLNEYKSEAFHLFESMIQQLREAVTAQLMRVEILQAPPP
                     DQQAE"
BASE COUNT          871 a         1170 c         1135 g          784 t
ORIGIN      
        1 agaggggaga ctgtaatgga catattgtca tgaccgggct tggcccggcc atccacgtct
       61 aatgagttgc gatatttaaa agacgcggat gcccgcgaca agcgcgggca tcacgaaatg
      121 atttgatggg tatgatgcgc gctatttctt cgctggcgga gctgcggcgg gcttttcttc
      181 ggcctttgcc ggcttgtcca tgcgctcgat ttttgcgtct gcccgcagtt tggtaaccag
      241 gtctgcctgc gccttgcgca ccacgaaatt ttcaatctgt ggcttcacat cctcgaattt
      301 cggggcctgt tttgtccgct tgtcctcaac cttaatgaca tgccaaccga actgggtttt
      361 gacggggtct gaaatctgcc ccgattccag tttgaacgca gtttcggcga attccggcac
      421 catttgatcc ttggtgaagt atccgagatc gccgccattc gctttcccgg agggatcctc
      481 ggtaacttcg cccgccacct tggcgaaatc ttcgcccttc ttcaggcggg tgatgactgc
      541 ctttaccttg tcctccgcct ccttgctggc tttgtcgtcg ccggcaggtg ttcggaagag
      601 aatgtgccgg gcacgcactt ccttctcttc gccgatctgc ttgaccgcct catcgtagac
      661 cttgtgcatc gcatcgtcgg tgagcgcttc cttgccgacg gattggagca atccttccat
      721 aaggagcttc ttgcgggcga actcaagctt gcgcttgaag tcggccgtgt caccgaactt
      781 cttgtcctgg gcggccttcg atacaagaat catgtcggcc acaaactgaa tcagataatc
      841 ctgcttggct tccggtgaca tcgggggaat ctgacctgcc tcatcctccg cgacggcaag
      901 atcgctctgg tggatctcga cgccgttaac tttggcgaca acagggtctt tgtcttgcgc
      961 gtagacccag gcacccgaaa tgagaagcag cgcggcgcca atgaaagcgg ccgggcgcag
     1021 tcggaccgga aagccggcag gaaaggaaat cgtcatgaca ttgtccttgg atgaaggata
     1081 ccgcccggtc gggcaggcgg cgcgcgcgac tattcgccca acaaccatgg ctttgcaatg
     1141 gccgaccggc acggaaaagc taacgtcccc gtgaccgaaa accggccaat tctcggaagt
     1201 cggcaattga caacaatccg accccctcat atctctcgct cggcgttggc tattcgctat
     1261 ttgcctgcgc gtttcgcgtc gaatttgccc gaaaagtgtc gcattccgga acgccggagg
     1321 caaatccggc cgtggcggca tgatataagc atccggccaa gttaggagct cccccgtatg
     1381 atcagcgccg ttgcccgcaa gctgtttgga tccgccaacg atcgtcgcat ccgcagctat
     1441 ctgccccggg ttggcgagat caacgcgctc gaaaaggaac tggaaagcct ttctgacgat
     1501 gcgctgaagg cgcggaccga cgaattcaag aagcaggtcg cggaaggcgt ctcgctcgag
     1561 gacattctgg ttcctgcctt cgccaccgtc agggaagcct cgaagcgcac gctgggccaa
     1621 cgtcatttcg acgtccagct gatcggcggc atgatcctgc acgaaggcaa aatatcggaa
     1681 atgaagaccg gcgaaggcaa aacgctggtt gcgactcttg cggtctatct caatgcgatc
     1741 gccggccgtg gcgttcatgt ggtgacggtc aacgattatc tggccaagcg cgacgccgaa
     1801 tggatggggc agatttacaa cttcctcggg ctttcggtcg gggtcatcgt ccatggtctg
     1861 gacgatgagc agcgcaagaa agcttacgat tgcgacatca cctacggcac caacaacgaa
     1921 ctcggcttcg attatctgcg cgacaacatg aagtaccggc tggaggatat ggtccagcgc
     1981 ggacacattt acgcgatcgt cgacgaagtc gactcaattc tgatcgacga ggcgcgcacg
     2041 ccgctgatca tttcgggtcc gctcgatgac cgctccgagt tctacaacac gatcgacagc
     2101 tacattccgc agctcgacaa ggcggactac gaagtcgacg agaaacagag aaccgtcacc
     2161 ctgacagaag cgggcatgga gaagctcgag cagcgcctgc gcgacgccgg ccagctcaag
     2221 ggagactcgc tttacgacat cgaaaacgtt tccgtcgttc accacgtcaa ccaggcactt
     2281 cgcgcgcaca agctcttcca gcgcgacaaa gactatatcg ttcgcaacgg cgaagtggtg
     2341 atcatcgacg aattcaccgg ccgcatgatg cctggccgaa gatattcgga aggtttgcat
     2401 caggccctgg aagcgaaaga gcatcagccc atccagcccg agaaccagac gctcgcttca
     2461 atcaccttcc agaattactt ccgcatgtac gaaaagcttg ccggcatgac cggcacggcc
     2521 atgacggaat ccgaagaatt tatggatatc tatgggctcg aagttctcga agtgccgacc
     2581 aatatgccgc tcatccgcct cgacgacgac gatgaggtct atcgcactgc tgcggagaaa
     2641 tatcgggcga ttctgactct tatcgaggat tgcaagacac ggggccagcc agttcttgtc
     2701 ggcaccacgt cgattgagaa atcagaacag cttgccgaga tgctccgcca gaagggctgg
     2761 gaacagcacg acttttccga tcccaacgcc ttcgcagcgc tgtattcagg agacgaaggc
     2821 gcgtcgaaga aaaaagtatt cgcgattctc aatgcgcgtt accacgagca ggaggcctac
     2881 atcgtcgcac aggccggcgt gcctggcgca atcacgatcg ccactaatat ggcggggcga
     2941 ggcaccgaca ttcagctcgg cggcaatccc gatatgcgca ttcgccagga aatcagcgac
     3001 attgccgatc agcgggaacg cgagaagagt ccccgggccg atgaaatccg taaacaggtt
     3061 gcgcggctga aggaaaaggc gctcgctgcc ggtggtctct ttgttcttgg caccgagcgc
     3121 cacgagagcc gccgcattga caatcagctg cgcggccgct cgggccgcca gggcgatcca
     3181 ggtcattcca agttcttcct ctccctggaa gacgacctga tgcgcatctt cggatccgac
     3241 aagctcgacg gaatgttgca gaagctcgga ttgaaggaga acgaggcaat cgttcatccc
     3301 tggatcaaca aggcactcga gaaggcgcag cagaaggtcg aggcgcgcaa cttcgatctg
     3361 cgcaagaacg ttctcaaata cgacaatgtc agcaacgacc agcgcaaggt gatattcgac
     3421 cagcgagtcg aactgatgcg cgacgagacc gtcgctgaaa cgatcggcga tatgcgccat
     3481 gcggtgatcg atgacctcgt cgccaaacac gttccggaga acgcctatcc cgagcaatgg
     3541 gataccgccg gcctgaagga gcagctcaat cgggtgctcg ggctcgagct tcccgtcgat
     3601 gaatgggcga aggaggaagg gatcgccgac gaggaactcc tcgcgcgcgt cgagcgccgc
     3661 gccgacgagc atatggcggc caaggtcgcc caatggggcc ccgacgtcct gcgctacgtc
     3721 gagaagtcga ttctgctgca gacgctcgac cagctctggc gcgagcatct cgtcatgctc
     3781 gagcatcttc gccaagtgat cgggctacgc ggctatggcc agcgcgatcc gctcaacgag
     3841 tacaagtcgg aagccttcca cctgttcgag tcgatgatcc agcagctgcg cgaagccgtg
     3901 acggcgcagc tcatgcgcgt cgagatcctc caggcgccgc cgcccgacca gcaggccgaa
//
LOCUS       DATDHO010000885         1915 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_293148, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000885 DATDHO010000000
VERSION     DATDHO010000885.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1915)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1915)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1915
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293148"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..367
                     /locus_tag="VIY07_17455"
     CDS             <1..367
                     /locus_tag="VIY07_17455"
                     /inference="COORDINATES: protein motif:HMM:NF013717.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HEY6383577.1"
                     /translation="VPRLRRQAREPLLEIHPETAASLDIQDQDWLRLETAMGGIRLKA
                     KFNSSLDPKVVATQYGWWQACNELGLPGYDALSSNGANVNLLISNDATDPISGAVPHR
                     SQPCRVRKENARAVSKKHQ"
     gene            complement(361..>1915)
                     /locus_tag="VIY07_17460"
     CDS             complement(361..>1915)
                     /locus_tag="VIY07_17460"
                     /inference="COORDINATES: protein motif:HMM:NF019982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEY6383578.1"
                     /translation="RDGYRACGERLAREVGDLSAFNTVENANDVDAIRQALGYGRIAF
                     YGVSYGTELGQYLMRQHSAILHAVVLDAVVPTQFNLMTQVGSVKQRIAQKYFQGCERE
                     AACREAYPDLAKRLLTLLDRFDREPAKLAIRDPKNPGKTLTVKLTGEALADAVYQALY
                     IRDVRPLIPYIIDRADQGDFTFISGLLLPLQLDNDDHAIGMYMAVVCTERGDSDPNVI
                     RTSGFNPRLLRAELKGAQEMIGVCKDWKVELLPREVLEPVKSNVPTLLISGDFDPITP
                     PDFAKQVAAGLSRGQIVTFPRGAHGQAFESACANGLIESFLNNPTTPLNATCAILTPS
                     NFVVPRDLIVLPQLRSAIAEGTQKGLMSYAFRFIMIAAGLLVLLTAIPVYAVVEVIAC
                     LRGRRALTAATFGARLSAAAPWLPVLALLLFAGFLAVFAARMFATFDENKFLAFVGTV
                     PSSLRWVFAIAWLGVLVVVLMGAAALVLWKQRQRTFVGRLYYSLLLVAGVVAIVGLWQ
                     AGLLGALFH"
BASE COUNT          449 a          582 c          531 g          353 t
ORIGIN      
        1 tgttcctcgc ctgcggcgac aggcgcgtga accgcttttg gagatccatc cggaaacggc
       61 cgcctcttta gacattcaag atcaggattg gttgaggtta gaaacagcca tgggaggtat
      121 tcgactcaag gcgaagttca attcgtcact tgatccgaaa gtcgtcgcga ctcaatacgg
      181 ttggtggcaa gcctgcaacg agctggggct tcctggttac gacgctttga gctcaaacgg
      241 agccaacgtt aatttgctca tctccaacga cgccaccgat cccatcagcg gtgccgtgcc
      301 gcaccgttcc cagccttgcc gtgtcagaaa ggagaatgcg cgagcggttt ctaaaaagca
      361 tcagtgaaat agcgcgccga gcaaacccgc ctgccacaat cctacgatcg caacgactcc
      421 ggcaactaac agcaaactgt aatacagccg ccccacaaac gtgcgctgcc gctgcttcca
      481 caaaacaagc gcggccgcac ccatcaacac caccaccagg acgccaagcc acgcgatagc
      541 aaagacccaa cggagcgaac tcggcacggt gccgacgaaa gcgagaaact tgttttcgtc
      601 aaaagttgca aacatccggg cggcaaagac cgcaagaaat ccggcgaaga gcaaaagagc
      661 taaaactggc aaccaaggag ccgccgcgct cagccgcgcg ccaaatgttg cagcagttaa
      721 tgcgcgcctc cctcgcaaac aagcaatgac ctcgacaaca gcgtagacgg gaatggcggt
      781 cagcaacacg agcaggcccg cggcgatcat gatgaagcga aacgcgtagc tcatcaggcc
      841 cttctgcgtc ccttccgcga tggcgctgcg caattggggc agcacgatga gatcgcgagg
      901 aacgacaaag tttgacggcg tcaggatcgc acaggttgca ttcagcggcg tcgtcgggtt
      961 gttgaggaag ctctcgatga gcccattcgc gcaagcactc tcgaacgcct ggccatgcgc
     1021 gccgcgcggg aaggtcacga tctggccgcg gctcaggccg gctgcaacct gctttgcgaa
     1081 gtccggcggg gtaatcggat cgaaatcacc cgaaatgagc aacgtcggca cattgctctt
     1141 gaccggctcg agaacttcgc ggggcagcag ctcgaccttc caatccttgc acacgccaat
     1201 catctcctgc gcgcctttta actctgcgcg cagcaagcgg gggttaaacc ccgaagttcg
     1261 tatgacgttc ggatcggagt ctccccgctc cgtacatacc accgccatgt acatgccaat
     1321 cgcatggtcg tcgttgtcaa gctgcaacgg caacaaaagg ccggagatga acgtgaaatc
     1381 gccttgatcg gcgcggtcga taatatacgg gataagcggt ctgacatcac gaatgtaaag
     1441 agcctgatag acggcgtccg cgagagcctc gccggtaagc tttactgtga gtgtttttcc
     1501 cggatttttc ggatcgcgga ttgccagctt tgccggctcc cggtcgaacc ggtcgagcaa
     1561 cgtaagcaaa cgtttagcga ggtccgggta ggcctccctg catgcggcct ctctttcgca
     1621 cccctggaag tatttctgcg cgatccgttg ctttaccgaa ccgacttggg tcatcaagtt
     1681 gaactgcgtc ggcaccaccg cgtcaagcac caccgcgtgc agaatggcgg aatgttggcg
     1741 cattaagtat tgtccaagct ccgtgccgta ggaaacgccg taaaacgcga tccggccgta
     1801 gcccagagcc tgacggatgg catccacatc gttggcgttc tccacggtgt tgaaagcaga
     1861 cagatcgcct acttcccgcg caagccgctc tccgcaggcg cggtacccgt ctcgc
//
LOCUS       DATDHO010000886         2407 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_342277, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000886 DATDHO010000000
VERSION     DATDHO010000886.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2407
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342277"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..656)
                     /locus_tag="VIY07_17465"
     CDS             complement(<1..656)
                     /locus_tag="VIY07_17465"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HEY6383579.1"
                     /translation="MRGFIKVAGSRTVVTGATGCMYVANTSYLTTPWIVPWMHTQLGA
                     GGSSAVGMAAGLRALKRKGKIKDEKINVINFSGDLGAGDMGIGGISGALQSDYDLLII
                     MYDNESAANTDIQATGLTTYGAQTTFTPPGTKHSIMQRRWKKNVAGMLAVGHPTCRYV
                     ATACATFPPTDYLNKVQKALAIGGPTFIHTYDPCPKGWDYHPRFSNELGELGIKCGIY
                     P"
     gene            complement(798..2039)
                     /locus_tag="VIY07_17470"
     CDS             complement(798..2039)
                     /locus_tag="VIY07_17470"
                     /inference="COORDINATES: protein motif:HMM:NF013974.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383580.1"
                     /translation="MSVAVATAKSDQSGVYEREDLLNGCQAVAHGVRLADVDVIAAYP
                     IRPYTEVMDALSKLIADGQFDSEYIIADSEHSQFEIVKHASSVNARAFGGSSGTGWMY
                     GMEALVVTATDRLPPLFVVGNRALDDPGAFGVEHNDAMSVRDMGWLLCWVTTPQEALE
                     HVLIGYRIAEDKKVRMPMGLAMDGAFLTHSQHMVKIPSPEAAKRFLPQYDLAERRLHP
                     DNPISIAPQINEDWVMELRRQNWEAAKRARGVIKEAYKEFNDIFGNRYAAPYYFDEFM
                     TDDAEVVLIGIGTVAAPARTAVRRMREKGQKVGYVNLRWFRPFPTVELRDCLSRFKAV
                     GVVDRDFAHGSPDNGGILMHEVRSCLYPAKNRPAIVNFMGGLGGRDLSIADAQKMYDI
                     TQQAMKKDSMDGFVTWIGLRE"
     gene            complement(2036..>2407)
                     /locus_tag="VIY07_17475"
     CDS             complement(2036..>2407)
                     /locus_tag="VIY07_17475"
                     /inference="COORDINATES: protein motif:HMM:NF026048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster-binding protein"
                     /protein_id="HEY6383581.1"
                     /translation="RFDLCTKCTLCWVECPDECFDPTSDGYYDIEYQYCVGCGKCAEI
                     CPVKECIVMVDELQFEDDSSPWEHWKKDSKEYIQWVEDKKGKDRVSYPVVTGKGITIT
                     KGQVMPEGKIVPVRKTEEVEV"
BASE COUNT          463 a          711 c          683 g          550 t
ORIGIN      
        1 ggatagatgc cgcatttgat tcccaactcg ccaagctcgt ttgagaagcg cgggtgatag
       61 tcccaacctt tgggacaggg atcataggta tgaataaagg tcgggccgcc gatggcgagc
      121 gccttttgga ccttgttcag atagtccgtg ggcggaaagg tggcgcaggc ggtggcaaca
      181 taacggcagg ttggatggcc gacggccagc atgccggcga cgttcttttt ccagcgccgt
      241 tgcatgatgg agtgcttcgt ccccggaggg gtgaaggtcg tctgcgcgcc gtaggtggtc
      301 aaacccgtcg cttgaatatc ggtattcgcg gccgattcgt tgtcgtacat gatgatcagc
      361 aagtcataat cgctctgtag ggcgccggag atgccgccaa ttcccatatc gccggcgccg
      421 agatcgccgg agaagttgat gacattgatc ttctcgtctt tgatcttccc cttgcgcttg
      481 agcgcgcgca ggcccgcggc catgcccacg gcggacgagc caccggcgcc gagctgggtg
      541 tgcatccagg gcacgatcca gggtgtggtc aagtacgagg tgttggctac atacatacag
      601 ccggtcgctc ccgtgacaac ggtgcgcgaa cccgccacct tgataaagcc gcgcattgtc
      661 gtcgccgact cgcatccctg acaggtgcga tggccggagg tgtaaagctc ttccagcgga
      721 attttgtgaa cgcctttgat tctctcgtaa tcgatttgtg gtgcggttga ggttgacata
      781 atcgtttcct cctattttta ctctcttaga ccgatccagg ttacgaagcc gtccatggaa
      841 tccttcttca tcgcctgttg agttatatca tacatctttt gcgcgtccgc aatggagaga
      901 tcgcgcccgc ccagaccacc catgaaattg actatcgcag gccgattttt ggccggatag
      961 agacaagagc ggacctcgtg catcagaatg ccgccgttgt ccggcgagcc atgggcaaag
     1021 tctctatcga ccacgccgac cgccttgaag cggctcaagc agtcgcgcag ctcgaccgtc
     1081 gggaacgggc ggaaccagcg caggttcacg taacctactt tttgtccctt ctcgcgcatg
     1141 cgacgcaccg ctgtgcgtgc cggagccgcc accgtgccga tgccgatcag gaccacttcc
     1201 gcgtcgtcgg tcatgaattc atcgaagtag tagggcgcag cgtagcgatt accgaagatg
     1261 tcgttgaact ctttataagc ttccttgatc acgccgcgcg cccgtttggc ggcctcccag
     1321 ttctggcgtc tcagctccat aacccagtcc tcgttgatct gcggcgcgat cgagatcgga
     1381 ttgtcgggat ggagccgccg ctcggcgagg tcgtactgcg ggagaaatct cttcgccgct
     1441 tccggcgacg ggatcttcac catgtgctgc gagtgggtga gaaaggcgcc atccattgcc
     1501 aatcccatcg gcatcctgac tttcttgtct tcggcgatac ggtagcctat cagcacgtgt
     1561 tccaacgctt cctgcggggt agtcacccag cagagaagcc agcccatgtc gcggaccgac
     1621 atcgcatcgt tgtgctcgac gccgaaggcg cctggatcgt ccagtgcgcg gttgcccacc
     1681 acgaaaagcg gcgggagacg gtcggtcgcg gtaacgacca gcgcttccat cccgtacatc
     1741 caacccgtgc cgctcgatcc gccgaaggcg cgcgcgttta ccgaactggc gtgcttgacg
     1801 atctcgaact gcgaatgctc gctgtccgcg atgatgtact cggagtcgaa ttgaccgtcg
     1861 gcgatcagtt tagagagcgc gtccatcacc tcggtatagg gacggatggg ataagcggcg
     1921 atcacgtcca catccgccag gcggacgcca tgcgcgacgg cttggcagcc gtttaaaagg
     1981 tcttcacgct cgtagacacc tgattgatct gatttcgctg ttgcgactgc gacactcata
     2041 cttcaacctc ctccgtcttt ctgacgggta cgatctttcc ctcgggcatc acctgtccct
     2101 tagtgatcgt gatgcctttg ccggtgacga ctgggtaaga aactcggtct ttgccctttt
     2161 tgtcctctac ccattgaatg tattctttgg aatccttttt ccagtgttcc cacggactcg
     2221 agtcgtcctc aaattggagc tcatccacca tcacgatgca ctctttcact ggacagatct
     2281 cggcgcattt gccgcaacca acgcagtact ggtactcaat gtcgtagtag ccgtcgctgg
     2341 tcggatcgaa gcattcatcc ggacactcaa cccagcaaag cgtgcactta gtgcagagat
     2401 cgaaccg
//
LOCUS       DATDHO010000887         1743 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_485553, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000887 DATDHO010000000
VERSION     DATDHO010000887.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1743
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_485553"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1711)
                     /locus_tag="VIY07_17480"
     CDS             complement(<1..1711)
                     /locus_tag="VIY07_17480"
                     /inference="COORDINATES: protein motif:HMM:NF024116.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383582.1"
                     /translation="MRDVSFIEDLVHDLRYGLRMLRGNPAFTAVAVLILGLGIGANSA
                     IFAVVNAVILQPLPYKHPDRLAVVWERNTAIGKNKDPVAPLNYSDWSRLNTEFEDMAA
                     FRYGVFTLTGTEYPEQVQALTVTSSLFRTLGVEAAIGRAFTEEEAQRRDRVVVLSHSF
                     LKNRLGGDRSWIGRSITLDEASYLVLGVMPPLFEFPDGGSAIDLYSPLIFNQGDLIGR
                     RSHSLTVIGRLKRHATIESAAANLESIAKAIARQDSTSNPEVAVFGAHDQIVQHVRLG
                     LSVLLGASGFVLLIACANVANLLLARAAARRREIAVRTALGANPWRIARQLLTESLLL
                     SLAGGIAGMLFAWWTLDLFVQFSPPDLPRMNRVTVDSSVLLFVTALSALTGILFGLAP
                     ALAASRENLGLAIKERSFELSGPTRSHGRSMLVVAEVALSLMLVVGAGLMIRTLLYLQ
                     EMDHGFRPEQVLTMQIWLPASRYPIDNAQFRPAPPPGSPPVPLSKPSTFVAELLDRVR
                     NLPGVQAAGAVSALPLNPVGIDYDMPVLIEGKPRPKLGQEPQADLRMATTGYFRTMSI
                     PLLG"
BASE COUNT          372 a          526 c          529 g          316 t
ORIGIN      
        1 cgccgagaag cggaatgctc atcgttcgaa aataacctgt ggtcgccatg cgcagatccg
       61 cctgcggttc ttggccgagc tttggcctgg gcttcccctc aatcaagacc ggcatgtcat
      121 aatcgatacc tacgggattc aggggtagcg ccgacacggc gccggcggcc tgaacgcccg
      181 gcaggttgcg cactcgatcg aggagctccg cgacaaacgt cgagggcttc gacagcggaa
      241 caggcggcga acccggcggc ggtgcgggac ggaactgagc attgtcgatc ggatatctcg
      301 atgctggaag ccagatctgc atggtcagaa cctgctcggg ccgaaagcca tgatccattt
      361 cctgaagata caggagcgtt cggatcatca gtcctgcccc cacgacgagc atcagcgaga
      421 gggcgacttc agcgacgacg agcatggagc gtccgtgact tcgcgtcggc ccggaaagtt
      481 cgaatgacct ctctttgatc gcaaggccta gattctcgcg ggaagctgcg agagccggcg
      541 ccaggccgaa gagaatcccc gtcaacgcag aaagagcggt cacgaaaaga aggacacttg
      601 aatccaccgt cacccgattc atgcgcggca ggtccggagg actgaattga acgaaaaggt
      661 cgagcgtcca ccaggcgaac agcattccgg cgattccgcc agcgagcgaa agcagcagac
      721 tctccgttag cagctgcctc gcgattcgcc agggattggc gccgagcgcc gttcgcactg
      781 cgatctcgcg ccgccgggct gcggcccgcg ccaacaggag gttggcgaca ttcgcgcatg
      841 cgatgagcaa aacgaagccg gacgcgccca ggagcacgga caggccaagg cggacatgct
      901 gcacgatctg gtcatgcgcc ccgaaaacag cgacctcagg attgcttgtc gaatcctgcc
      961 gcgcgatcgc cttcgcgatc gattccaggt tcgccgcggc ggattcgatc gtggcgtgtc
     1021 tttttagcct gccgatgaca gtcagggaat gagaacgccg cccgatgagg tcgccctggt
     1081 taaagatgag aggcgaatac aaatcgattg cgctgccgcc gtcggggaac tcaaacaacg
     1141 gcggcatcac gcctagaacc aggtagctgg cctcatcgag tgtgatcgat ctgccgatcc
     1201 aggaccggtc gcccccgagc cggtttttca ggaagctgtg gctgaggacg acaacgcggt
     1261 ctcgtctctg cgcttcctct tcagtaaacg cgcggccgat tgccgcctct acgcccagag
     1321 tgcggaaaag actgcttgtc acggtgagcg cctggacctg ttccggatat tccgtaccgg
     1381 tcagcgtgaa gacgccgtag cgaaaggctg ccatatcctc gaactcggta ttgagtctgc
     1441 tccaatccga gtaattcagt ggcgcgaccg gatctttgtt cttcccgatc gccgtgtttc
     1501 gctcccagac gaccgcgagc cgatccggat gcttataagg tagcggctgc aggataactg
     1561 cattgaccac ggcgaatatt gcgctgttgg cgccaatccc caggccgagg ataagcactg
     1621 ctacggctgt gaaggcggga ttaccacgca gcatgcgcaa cccgtagcgc aaatcgtgca
     1681 ccaggtcttc aatgaaacta acgtctcgca tatcgcggca ttcctccttg cttcgcgcgg
     1741 tcg
//
LOCUS       DATDHO010000888         8890 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_143885, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000888 DATDHO010000000
VERSION     DATDHO010000888.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8890)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8890)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8890
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143885"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VIY07_17485"
     CDS             <1..235
                     /locus_tag="VIY07_17485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEY6383583.1"
                     /translation="VGIYLSMGWSGIFTIGPITAALAPVTLWLIGAGGVLYSVGVIFH
                     AWNSLRFQNAIWHGFVLTAALCHYAAVLTSLVT"
     gene            complement(251..1219)
                     /locus_tag="VIY07_17490"
     CDS             complement(251..1219)
                     /locus_tag="VIY07_17490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6383584.1"
                     /translation="MKGQFVAAALLVLAGLGGAHAQEYPARTVTIIVPFAPGGPADVT
                     GRIVADIFSRHLGQQFVVENVGGAGGTIGSLRAARAAADGYTIISGHMGTHAAAPFFY
                     PNLGYDPEKDFEPIGLIAEQPELLAVRKDFPANNLKEFIAYAKANESKLNMGHAGVGS
                     VSYIGCLLLNSAIGIKPAMVPFTGTAPVMNAILAGQVDYDCDPVLGPLPHVRAGTVKA
                     LAIATKKRSPLLPDVPTSYEQGLPEFDCAPFYALFAPKGTPKAIVDKLAEALNKGLSE
                     ETVQKRLADLGAEIAEPERRGPKALADLQRSEVNRLGPILKAATAK"
     gene            1377..2351
                     /locus_tag="VIY07_17495"
     CDS             1377..2351
                     /locus_tag="VIY07_17495"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383585.1"
                     /translation="MQRRQFIQIVAGSAAAWSLNAYAQPKKIWRIGMLETVAAALKTA
                     DYEAFLAGMESLGYVDGRDFKIEYRSVDGHPDRFPKLAQELVSQNVDLITTRGTPAAF
                     AAKNATKTIPVVMAAIGEPLLVVASLSRPGGNITGLSAFVNDLMGKRTELLRDMLPGL
                     SWVGALLNMSNRSQPPQWTEIQNTARANGVEAQLFDVRSAADLATAIDDASKHKTGAI
                     VVGIDTLTQSNQRIIIELAAKHRVPAIYPSREFVDAGGLISFGVNYPDLYRRTAIFVD
                     KIFKGAKPSDLPVEQPTKFELVVNLKTARAIGLTVPPMLLARADEVIE"
     gene            2547..4418
                     /locus_tag="VIY07_17500"
     CDS             2547..4418
                     /locus_tag="VIY07_17500"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6383586.1"
                     /translation="MFRDLRAGTKFLILCLVSLALTSVATYALLVEKQIAINFARSEL
                     VGSKYLAFLRPIYVTVLKKQAGDALAGLPNAFTRDSLDSLSRARSESASTLNIDNNVK
                     SLEAALLSFNTNNNVSLATDDVYLAALKYLRDLATRIGDDSKLTLDPVLDTYHVQHIV
                     VTRLPAALEDIGKTQLLTRPPKGTNDFVEQKARFIALDSLLRANMDGVFDDLRIAQRG
                     ISDGRLEKIVEPAITALATKTTAYLDSLRAFIDSGAENTRQAGLPYADTVNSALDAWA
                     ITQQQLDQLLIQRIDHLQRQRLLNLAVIGTLGMLGLFVAFLTYRDMIVPIRQLADLAN
                     EIRETKNYGLRSDYKSRDEIGGLAASFNEMLGELEVAREREIMRQTEISRVSRLTTMG
                     AMVASIAHEIRQPLAALVANSHAGTRWLERKEPNLEEARSALASIAQDGHRANEVITS
                     ISMMFKKNANRRVPVDTNEVVNDVLNLSRGELRSRNIALQTNLAPDLPQVPADPVQLR
                     EVLLNLIMNAAEAMSSTDEGRRILAIASMPAEDGVSISVEDSGEGLDPKNTEQIFEAF
                     FTTKPTGMGMGLAICRSIIAAHGGRLWASPGHSCGTVFHVVLPVRAGQQDPAGTPTV"
     gene            complement(4434..4781)
                     /locus_tag="VIY07_17505"
     CDS             complement(4434..4781)
                     /locus_tag="VIY07_17505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383587.1"
                     /translation="MTFEHQWFVRPVLAGISGVLLLALLSRADAQDVRGLEVCTAEKQ
                     MERRTGCLQANVEFLQQTLAKLARETQDKIASAGRDLAAARAEIATLKATVAKLDSEL
                     AQLKAKAEPAGKK"
     gene            4993..5976
                     /locus_tag="VIY07_17510"
     CDS             4993..5976
                     /locus_tag="VIY07_17510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEY6383588.1"
                     /translation="MLAVQAASAANEQVLKAVKDRGRLNCGVSEGLYGFSARDNNGNW
                     SGFDVDLCRAIAAAIFNDTSKVAYFPLDAGRRFEALKSGSIDVLSRNTTWTMSREVEL
                     GLVFAATNFYDGQGFIVRRAMNKDTALDLDGVKVCVQTGTTTELNLADYFRANKMRYE
                     AVSSTSLDGAIKGYDSGQCNVLTADGSALFAVRLLLSKPDEHIILPDVISKEPLGPVV
                     RQDDMQWFNIVKWVHFALVNAEELGVTSKNIDEALKSENPDIRRLVGTEGNYGERMGL
                     GKDWAANALRLVGNYGEVYERTVGVGSALGIPRGINQLWNRGGILYAPPIR"
     gene            6108..6968
                     /locus_tag="VIY07_17515"
     CDS             6108..6968
                     /locus_tag="VIY07_17515"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6383589.1"
                     /translation="MADYFPLLARAVAALSPNTKEQRQALYDRARNTLIEKMRDPTFS
                     QADLKTESEALEAAIQRVEMDAMRRAAPPPRAKPRPKAHAAPPPGYRDRPPLTDPKKP
                     LRIAAGALGAALVLGAGWAAYQYWPRNLSDVRTIAAARSVPAVAEQSDAKSDYVRLRQ
                     LVYFRTNQPVGTIMVDKSQTFLYVVRPNTSALRYNIGVGTECAALAGLYRVVRKEELP
                     GNKSGQQSVDMSSLGSRVLYLDKDYRIHGSNPAAAGRALPEGCIRLINDDVIYLYDRT
                     PLENRVVVSN"
     gene            7050..7394
                     /locus_tag="VIY07_17520"
     CDS             7050..7394
                     /locus_tag="VIY07_17520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383590.1"
                     /translation="MRMPIFSYFLVTGTVLAGLLVWLGGETQSSDSALKTSQTVGLPK
                     PFKAPPESSAYRVTGANFAAGREAQATKPAKAAEKPEVHVRRQKVTNKYYPKVPTWSH
                     FAEYAYDRFGIH"
     gene            complement(7416..8564)
                     /locus_tag="VIY07_17525"
     CDS             complement(7416..8564)
                     /locus_tag="VIY07_17525"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018485366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY6383591.1"
                     /translation="MRLKHCINYHDFRELARRRLPGPIFNYIDGAADDETTHRRNTSA
                     FDDCDLVPSVLTGVERVDLSVQVLGHRLEMPFYCSPTALQRLFHHQGERAVAHAVQKF
                     GTMFGVSSLATVSLEEIASKFSFPQIYQFYFHKDRGLNRAMMERAKDAGVSIMMLTVD
                     SITGGNRERDLRTGFSIPLRLTLEGLFQFAIKPKWAIDYLTHERFRLPQLEDHVAMAG
                     GATSISDYFTTMLDPSMNWRDVAEMVKHWDGKFCLKGVMSVDDAKKAIDIGCAGIVVS
                     NHGGRQLDGSRSSFDQLAEIVDAVGDRIEVLFDGGVHRGTHVLKALSLGARAVGVGRY
                     YLFPLAAAGQAGVERALELMRAELERDMKLMGCTSIGRLSRSNLRFRN"
BASE COUNT         1838 a         2616 c         2583 g         1853 t
ORIGIN      
        1 ggtcggcatc tatctctcga tgggctggag cggcatcttc acgatcgggc ccatcaccgc
       61 ggcgctcgca ccggtgacct tatggctcat cggcgcaggc ggcgtactct attcggtagg
      121 cgtcatcttt cacgcctgga acagcctgcg ctttcagaac gcgatctggc atggcttcgt
      181 gcttactgcg gcgctgtgcc actacgccgc cgtattgacg tcactggtca cgtaacggcg
      241 ccagtccaac ctacttggcg gtcgcggcct tcaggatcgg ccccagccgg ttcacctcgc
      301 tcctctgcag atccgccaga gcctttggtc cccgacgctc cggctccgcg atctcggccc
      361 cgagatcggc caggcgcttc tgcacggtct cctcgctgag ccccttgttc agggcttcgg
      421 ccagcttgtc gacgatcgcc ttcggcgtgc ctttgggagc gaacaatgca taaaaaggtg
      481 cacagtcgaa ttcgggcagg ccctgctcgt aagacgtggg cacgtccggc agcagcgggc
      541 ttcgtttctt tgtcgcgatg gcaagcgcct tgacggtgcc ggcgcgcacg tgcggcagcg
      601 gtcccagcac cggatcgcaa tcgtagtcga cctggccggc gagaattgca ttcatgacgg
      661 gcgccgtgcc tgtgaatggc accatcgccg gcttgatgcc aatggccgag ttgagaagaa
      721 ggcagccgat gtaggatacc gagccaacgc ccgcgtgccc catgttgagc ttgctctcgt
      781 tggccttcgc gtaggcgatg aactccttga ggttattggc aggaaaatcc ttgcgcacag
      841 cgagcagctc gggctgctcg gcgatcaggc ctattggctc gaaatctttc tcggggtcat
      901 agcccaagtt gggatagaaa aacggcgccg cggcgtgcgt gcccatgtgg ccggaaatga
      961 tcgtgtagcc gtcagccgct gcacgcgccg cgcgcagcga tccgatcgtt ccgccggcgc
     1021 caccaacgtt ttcgactacg aactgctgcc cgagatgacg ggagaagatg tccgcgacga
     1081 tccggccggt cacgtcggcc gggccgccgg gcgcgaaggg cacgatgatc gtcaccgttc
     1141 gggccgggta ctcctgagca tgtgcgcccc cgagtccggc gagcacaagc aatgccgccg
     1201 caacgaactg tcccttcatt atcccctccc tgacgtactc tttattgcaa gatagccgtg
     1261 tcgcaccccg gattgtagtc actgtgagtt gcgctgcgcc ggagacccgt gcggacattt
     1321 ccatgaactg atatgctttg agctgtcttt ttgtcgcacc atggtttggg ggacctatgc
     1381 agcgacgcca gttcatccag attgttgcgg gttcggcagc ggcatggtcg cttaacgcct
     1441 atgcgcagcc gaaaaagatc tggcgcatag gaatgcttga gactgtggcc gcggctctca
     1501 agaccgcgga ctacgaggca ttcctcgccg gcatggaatc tcttggctat gtcgacgggc
     1561 gggatttcaa gatcgaatac cgctcggtag atggccaccc cgatcgcttt ccgaagcttg
     1621 cgcaggagct tgtcagtcag aacgtcgatc tgattacgac gcgcggcacg ccggcggcgt
     1681 tcgcagccaa gaatgccacc aaaaccatcc cggttgtcat ggcggcgatc ggtgaacccc
     1741 ttctggtagt cgccagcctc tcccgtccgg gcggcaacat caccggcctc agcgccttcg
     1801 ttaacgactt gatgggcaag cgcactgagc ttcttcgcga catgcttccc gggctttcat
     1861 gggttggagc gctcctcaac atgagcaacc gctctcagcc accgcaatgg accgagatac
     1921 agaacaccgc gcgcgccaat ggtgtcgaag ctcaattgtt cgacgtccga agtgcggccg
     1981 atttggcgac cgcaatcgat gatgcaagca agcacaagac tggtgccatc gtcgtcggca
     2041 tagatacgct cacgcagtcc aatcaaagaa tcattatcga gcttgccgcg aaacatcgcg
     2101 tgccggcgat ctatccttcg agagaattcg tcgacgccgg agggctgatt tcatttggcg
     2161 tgaactatcc cgacctctac cgtcgcacag caattttcgt tgataaaatt ttcaaaggcg
     2221 caaagcccag cgacctgccc gtggaacagc caacgaaatt cgaactggtg gttaacttga
     2281 agaccgccag ggccatcggc ctgactgtgc cgccgatgct gcttgcgcgc gctgacgagg
     2341 tcattgaata gcaaactcat tgtttctgtt tcccgagcct gtcctggcac caactggaga
     2401 ccacaaagac aaacgcgaaa accgcgattt atgcacatat caatgctagt aaagcacggt
     2461 atttagatcg ggaattttcg gataaccaag agcggaatac ggcactaaac tgcattgcag
     2521 tatcgcgacg ggtactcggg gacttcatgt tcagggattt gcgtgccgga accaagtttc
     2581 tgattttgtg cctcgtgtct ttggcactca caagcgtcgc tacttacgca ctcctggttg
     2641 aaaagcagat cgccatcaat tttgcgcgga gtgagctcgt tggcagcaaa tacctggcgt
     2701 tcctccgccc gatctatgtg actgtactga aaaagcaggc gggcgatgct ctggcgggcc
     2761 tgccaaatgc gttcacgcgc gattccctcg attcgttatc gagagcacga tctgaaagcg
     2821 ccagcacttt aaacatagac aacaatgtga agtcgcttga ggcggcgctg ctcagtttca
     2881 acacaaacaa taatgtcagt ttggcgacag acgacgttta tctggctgcg ttgaaatatc
     2941 tgcgcgacct tgccactcgt atcggcgacg attcaaaatt aacgctggat cctgttcttg
     3001 acacttatca cgtgcaacac atcgttgtga cgcgtttgcc ggcggcgctc gaagatatcg
     3061 gtaaaacgca attgttgacg cgaccaccaa agggcacgaa cgatttcgtt gagcagaaag
     3121 cgcgctttat cgcactcgac agtctcttgc gtgcaaatat ggatggcgta ttcgacgatc
     3181 tcaggatcgc tcaacgtggg atctccgacg gaaggctgga aaagattgtc gagccagcaa
     3241 ttacggcgct tgctacaaaa acaaccgctt accttgattc attgcgcgcc ttcatcgaca
     3301 gcggcgcgga aaatacccgc caggctgggc taccatatgc tgacacggtc aatagcgcgc
     3361 tcgacgcctg ggcaatcacg cagcaacaac tcgaccagct gttgatccag cgcattgatc
     3421 atctgcaacg gcaacgtctg ttgaatcttg cagtgatcgg aacgcttgga atgctcggcc
     3481 ttttcgtcgc ctttttgact tatcgggata tgatcgttcc gatcaggcag cttgcggatt
     3541 tggccaacga gattcgcgag acaaaaaact acgggctgcg ttctgactat aaaagccgtg
     3601 acgaaattgg cgggctcgcg gcttcattta acgaaatgct cggcgaactt gaggttgcgc
     3661 gcgagcgcga gatcatgcgt cagactgaaa tatcgcgcgt gtcgcgattg acgaccatgg
     3721 gtgcgatggt tgcatccatc gcgcatgaga tcagacagcc tttggcggca cttgtggcca
     3781 attcacacgc cggaacacgt tggctcgaaa gaaaggagcc caatctcgag gaggcgcgct
     3841 cggcattggc aagcattgcg caggatggcc accgcgccaa cgaagtcatc acaagcataa
     3901 gcatgatgtt caaaaagaat gccaaccgtc gcgtgccggt cgacaccaac gaagttgtaa
     3961 acgatgtcct caatctttct cgcggcgagc tgcgttcgcg caacatcgcc ctgcagacga
     4021 atctggctcc ggatcttccg caggttcccg cagaccccgt ccagctccgt gaagtgctcc
     4081 tcaatctgat catgaacgcg gccgaggcca tgagctcgac cgacgaaggc cgacgtatcc
     4141 tggcgatcgc ttcaatgcct gccgaagatg gcgtatcgat tagcgttgaa gattccggcg
     4201 aggggctcga ccccaagaac accgagcaga ttttcgaggc attcttcacc accaagccga
     4261 caggaatggg aatgggcctc gcgatttgcc gctcgattat tgcagcccac ggcggacgcc
     4321 tgtgggcatc gccgggacat tcatgcggca cggtattcca cgttgttttg ccagtcagag
     4381 cgggtcagca ggaccctgcc ggtacgccga ccgtctgagc tgccgactca caactacttc
     4441 ttgccggcgg gttcggcctt ggccttcaat tgcgccagct cgctgtcgag tttcgcaacc
     4501 gtggccttaa gcgtcgcgat ttcggcccgc gcggcggcga gatcgcgccc tgcgctggcg
     4561 atcttgtcct gcgtctcgcg cgcaagcttc gcgagcgtct gctgaagaaa ttcgacattg
     4621 gcctgcaggc acccggtgcg gcgctccatc tgcttttcag ccgtgcagac ttcgagcccg
     4681 cggacgtcct gtgcatctgc ccgcgagagc agcgcgagaa ggagcacccc gctgatgcct
     4741 gcgagcaccg ggcgcacgaa ccactggtgt tcaaaagtca tgcttgagca gcctgttcaa
     4801 gacagagcat ccggtaatgc aaggttgatc cgcgcgggcc gcttatacca gccccgtttc
     4861 aatatgctag tttaccccca ggtttgtcga gcgtcggggg aagtcatgag gcagttgcgg
     4921 gatcttcgcg ccggtcggcg gggtagccgt cgccttcggc cggcgacggc atttctgatg
     4981 tttgcgctgt cgatgctggc ggtccaggcg gcctccgcgg cgaacgagca ggtgctcaag
     5041 gccgtgaagg atcgcggcag gctcaattgc ggcgtcagcg aaggccttta tggattttcc
     5101 gctcgcgaca acaacggtaa ctggagcggc ttcgacgtcg atttgtgccg ggcgatcgcg
     5161 gcggcaattt ttaatgacac tagcaaggtc gcctacttcc cgctcgatgc tggtcggcgg
     5221 tttgaggcac ttaaatcggg aagcatcgac gtgctctcgc gtaacaccac ctggaccatg
     5281 tcgcgcgagg ttgagcttgg gctggtcttc gcggcgacga atttctacga cggccaggga
     5341 tttatcgtcc gccgcgccat gaacaaggac accgcgctcg acctcgatgg cgtgaaagta
     5401 tgcgtgcaga ccggaacgac gacagagctc aatctcgccg attatttccg cgccaataaa
     5461 atgagatacg aggcagtttc ttcgacaagt ctcgacggcg ccatcaaggg ctacgattcc
     5521 ggccaatgca acgtgctcac agccgacgga tccgcgctgt ttgcggtgcg gcttctgctc
     5581 tcgaagccgg acgagcatat cattctgccg gatgtgatct cgaaagagcc actgggcccg
     5641 gttgtgcgtc aggatgacat gcagtggttc aacatcgtga agtgggtcca cttcgcgctg
     5701 gtcaatgccg aagagctcgg cgtgacttcg aagaacatcg acgaggcgct gaaatcagaa
     5761 aatccggata ttcggcgtct ggtcggcacc gaaggcaatt acggcgagcg gatgggcctc
     5821 ggaaaggatt gggcggcgaa tgccctcagg ctggtcggca actatggcga ggtctacgag
     5881 cgcacggttg gcgtcggttc ggcgctgggt attccgcgcg gaatcaatca gctgtggaac
     5941 agaggcggaa tcctctacgc cccgccgatc cgctgatcgt tttgaagcca tttaaggacc
     6001 agtccggcaa tgatgccatc gcagacttca gatgctaggc tggccttccc cgacccccgg
     6061 ggcaaaacgt tgcaatcgag ttcagtagag caagggtgag cggatcgatg gccgattatt
     6121 ttccgttgtt ggcgcgtgcg gtggcggcgc ttagccccaa tacaaaggaa cagcgccagg
     6181 cactgtacga ccgcgctcga aatactctga tcgagaaaat gcgcgacccg acgttttcgc
     6241 aagccgatct gaagaccgaa agcgaagcgc ttgaggcggc gatccagcgc gtcgagatgg
     6301 acgctatgcg ccgcgccgcg cccccgcctc gggcaaagcc gaggccaaag gctcacgctg
     6361 cgcctccccc gggttatcgt gatcggccac cgttgacgga tcccaaaaag ccactgcgaa
     6421 ttgcggccgg cgcgctgggc gcggccctcg ttctcggcgc gggttgggca gcctatcaat
     6481 attggccgcg caatttgtcc gacgtgcgta ccattgcagc cgcccgcagt gttcctgcag
     6541 tcgccgagca atccgacgcc aagtcggact atgtccgtct gcggcaattg gtttacttcc
     6601 ggacaaacca gccggtcggg acgatcatgg tcgacaagtc acagaccttt ctctacgtgg
     6661 tacgaccgaa cacgtccgcg ctgcgttaca acatcggggt tggaaccgag tgcgcggcgt
     6721 tggccgggct ctaccgcgtt gtccggaagg aagagctgcc tgggaacaag tccggtcagc
     6781 aatcggtcga catgagttcg ctcggttccc gagttctcta cctcgacaag gattatcgta
     6841 ttcatggttc caatcccgcc gcggccgggc gggcgcttcc agaaggctgc atccgactca
     6901 tcaatgacga cgtgatttat ctttacgatc gcacgccgct cgaaaatcgt gtcgtcgtat
     6961 cgaattagct gaactcgccc gccgtcgcag ggccaaagcg aggaacgtca cgcgcgcgtt
     7021 cgcgttgtat ctccggctgg gaggtccaga tgcgaatgcc aattttctca tactttctgg
     7081 ttacgggaac cgtgctcgcc ggtctcctcg tttggcttgg cggtgaaacg cagtccagcg
     7141 attcggcgct gaaaacgtcg cagacagtcg gccttccaaa gcccttcaaa gcgccaccgg
     7201 aatcgtctgc gtacagagta acgggtgcca acttcgctgc cggtcgcgaa gcgcaggcca
     7261 cgaaacccgc gaaggcggcc gagaagccag aggttcatgt tcgcaggcaa aaggtcacca
     7321 acaaatatta tccgaaagtc ccaacgtgga gtcatttcgc cgagtatgcc tacgatcgat
     7381 tcggcattca ttgaatcgga ttgccttcag atacgctaat ttcgaaatct gagattgctg
     7441 cgtgacagcc gtccgataga cgtgcagccc atcaacttca tgtcgcgctc gagttccgcg
     7501 cgcatcaatt cgagcgcccg ttcgaccccg gcctgtcccg ccgcagcgag cggaaagaga
     7561 tagtagcggc cgaccccgac tgccctggcg cccaacgaaa gcgccttcag tacgtgcgtc
     7621 ccgcgatgca ctcccccatc aaacagcact tcaatcctgt ccccgacagc atcgacgatt
     7681 tctgccagtt ggtcgaatga gctgcgggag ccgtcgagct gacggccgcc gtgattcgac
     7741 accacgattc cggcgcagcc gatgtcgatg gcctttttgg catcatcgac gctcatgact
     7801 cctttcaggc agaacttgcc gtcccaatgc ttgaccattt cagcgacatc gcgccagttc
     7861 atcgaagggt cgagcattgt tgtgaaatag tcgctgatcg aggtcgcacc tccggccatg
     7921 gcgacatggt cctcgagttg cggcaatcga aatcgctcgt gcgtcagata gtcgattgcc
     7981 cactttggct tgatggcgaa ttgaaacaga ccttcaagcg tcagtcgcaa tggaatcgaa
     8041 aagccggtgc gaagatcgcg ttcgcgattg ccgcccgtga tcgaatctac cgtgagcatc
     8101 atgatggata ccccggcgtc tttcgcccgc tccatcatgg ccctgttcag cccccgatcc
     8161 ttgtggaagt agaactgata aatctgcgga aacgaaaact tggaagcaat ctcttcaagg
     8221 ctgaccgtcg caagcgacga cacgccgaac atggtcccga atttttgcac ggcgtgcgcc
     8281 accgcccgct cgccttgatg atgaaagagc cgctgcagcg ccgtcggtga gcaatagaaa
     8341 ggcatttcca gtctgtgacc gagtacttgc actgaaaggt caacacgctc gacgccggtc
     8401 aagacactcg gcacaagatc gcaatcgtcg aatgcgctgg tgtttcttcg gtgcgttgtt
     8461 tcatcgtccg cggcgccatc gatgtaattg aagatgggac ccggaagtcg ccggcgcgcc
     8521 agctcccgga aatcatgata gttgatgcaa tgtttcaagc gcatgctgcc cccgatcgct
     8581 cgctagcgcg ctaacctaat ccagaattca aaagtttaaa ggtgcggatt tggcgcaaag
     8641 cggaatccga ctgcgggcgt ggcagaggcc ggcatgcgag gcccctgcgg ccggcgctcg
     8701 atcgattcgc gcgcgatatc gcggcgacca cggcccgtta accgtttgaa agatctcctc
     8761 agaagttttt cgggaacgaa aacgacggct gctggttcat agcgcatgtc cgcatttatc
     8821 tctgggagga ggcattcatg cggtcgtttc tatggcggcg gttgctgccg cattgggcgt
     8881 gcggcggctg
//
LOCUS       DATDHO010000889         2206 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_42711, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000889 DATDHO010000000
VERSION     DATDHO010000889.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_42711"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..611
                     /locus_tag="VIY07_17530"
     CDS             <1..611
                     /locus_tag="VIY07_17530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383592.1"
                     /translation="DLKGKTVAAPERSSRQAFVAGLATFVGLNPLKDITWINHEPGKS
                     MQLFAEGKIDAFMGFAPEPQEMRAKKIGRVLIDFGKDRPWSQYFCCMAAANRDFTRKH
                     PVATKRALRAMLKATDLCASQPERAARLMVDKGVADKYQYVLQSVKEIGFQWREYESE
                     DTVRFWALRLREAGIIKSSPSRIIAQGTDWRFFNELKQELKG"
     gene            614..1201
                     /locus_tag="VIY07_17535"
     CDS             614..1201
                     /locus_tag="VIY07_17535"
                     /inference="COORDINATES: protein motif:HMM:NF012787.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEY6383593.1"
                     /translation="MRAALVLAFVMLASLAPAQAHDAAQTKQQRLPNIAPAPAFALTS
                     QDGTPVALADFRDKVVAVTFIYTSCMDTCPVLTALMAYVQDKLGPDFGKRIAFVSITV
                     DPERDTPEVLKRYAETFGADLKGWAFLTGAPDAIRGVIRRYGVFAAKNADGQVDHTFL
                     TSIVDRNGMLRVQYLGVRFDPDEFRRDLLSLVKEQ"
     gene            1201..>2206
                     /locus_tag="VIY07_17540"
     CDS             1201..>2206
                     /locus_tag="VIY07_17540"
                     /inference="COORDINATES: protein motif:HMM:NF024140.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEY6383594.1"
                     /translation="MRLIGPLVGLVSRFMSPLVGLVSRMPARVQFKLLAAFLAIAMLL
                     IMVGAVGLNALSGVHQRAEELVKLQRKIEAYRQVQHDTTTQLYSVASALLSADERTLS
                     STLRQLNQFGYDVDRLQFVAKDEIELLGRFQQDYDRFIEIATRVVDMIRSGRAAEARD
                     LQAAQAAPLADRLERLTNQLVNKAEADMVAGIEASTQAYSNAQFVVIAFALASIALAL
                     GLGYAISWSLIGPVKEIEARLNQLAAGDFTQRVHVANRDELGALAANVNRMCDELGRL
                     YQQIEASLQQQTATADVLKVISRSTFDLQAVLNTLVESAARLCEADMASINRQHGNAY
                     R"
BASE COUNT          417 a          687 c          687 g          415 t
ORIGIN      
        1 gggatctcaa aggcaagacc gtagccgccc ccgaacgcag cagccgtcag gcgttcgttg
       61 ccggtctggc gaccttcgtc gggctgaacc cgttgaagga catcacctgg atcaaccatg
      121 agccgggcaa gtccatgcag ctctttgccg aagggaagat cgacgcgttc atgggctttg
      181 cgccggaacc ccaggagatg cgcgcgaaga agatcggccg cgtgctgata gatttcggga
      241 aggatcggcc atggtcgcag tacttttgct gcatggctgc cgcgaatcgc gacttcacgc
      301 gcaagcaccc ggtcgcgacc aagcgggcgc tgcgggccat gctgaaggcc accgacctct
      361 gcgcgagcca gccggagcgg gcagctcgcc tgatggtcga caagggcgtc gcggacaagt
      421 accagtacgt cctgcagtca gtgaaggaga tcggtttcca gtggcgggag tacgaatccg
      481 aggacacggt gcggttctgg gccttgcgtc tgcgggaggc gggcatcatc aagtcgagcc
      541 ccagcaggat catcgcgcag ggaaccgact ggcgcttttt caatgagctg aagcaggagc
      601 tcaagggcta agtatgcggg cggcgcttgt tctcgcgttc gtgatgctgg cgtccctcgc
      661 gccagcgcag gcgcatgatg ccgctcagac caaacaacag cgcttgccca acatcgcgcc
      721 cgcccccgca ttcgcgttga cctcacagga cggcacgccg gtcgcgctcg ccgacttccg
      781 cgacaaggtc gtggccgtga ccttcatcta tacctcgtgc atggacacct gcccggtgct
      841 caccgcgctg atggcctatg tccaggataa actgggacca gatttcggga aaaggatcgc
      901 cttcgtttcg atcacggtcg atccggaacg cgacacgccc gaggtattga agcgatacgc
      961 cgagacattc ggcgccgacc tcaaaggttg ggcgttcctc accggtgccc cggacgccat
     1021 tcgaggcgtc atccgccgtt acggcgtgtt cgcggcgaag aacgccgatg gccaggtgga
     1081 ccatacgttc ctcacgtcga tcgttgaccg gaacggtatg ctgcgcgtgc aatacctcgg
     1141 agtccgtttt gatcccgacg aatttcgccg tgacctcctg agcctcgtca aagagcaata
     1201 atgcgcttga tcggcccgct cgtcggcctg gtttcgcggt tcatgagccc gctcgtcggt
     1261 ctggtttcgc gcatgccggc gcgcgtgcaa ttcaagctgc tggccgcatt tcttgccatt
     1321 gcgatgctcc tgatcatggt gggagcagtc ggacttaatg ctttgagcgg cgtgcatcaa
     1381 cgcgccgagg agctcgtcaa gctccagcgc aagattgaag cctatcggca ggttcagcac
     1441 gacaccacca cgcagctcta cagcgttgcc tccgcgctcc tctccgccga cgaacggacg
     1501 ctgtcgagca cgctgcgcca gcttaaccag ttcggctacg acgtggatcg cctgcagttc
     1561 gtggcgaagg acgaaatcga gctactcggc cggttccagc aagactacga ccgcttcatc
     1621 gagatcgcca cgcgcgtcgt tgacatgatt cgctccggtc gtgcggcgga ggcgcgagac
     1681 ttgcaagcgg cacaggctgc tcccttggcc gaccgcctcg agcgtctgac caaccaattg
     1741 gtcaacaagg ccgaggcgga catggtcgcg gggatcgaag cgagcacgca agcgtactcc
     1801 aacgcacagt tcgtagtcat tgcgttcgcg cttgccagca tcgcgctcgc tctcgggctt
     1861 ggctatgcta tttcgtggtc gctgattggc ccggtcaagg agatcgaagc gcgcctcaac
     1921 cagcttgcgg ccggcgactt cacccagcgc gttcatgttg ccaatcgcga cgaattgggc
     1981 gcgttggcgg ccaatgtcaa cagaatgtgc gacgagctgg gacgcctgta ccagcaaatc
     2041 gaagcgtcgc tgcagcagca gacggccacc gccgatgtgc tcaaggtcat cagccgctcg
     2101 acgttcgatc tgcaggcggt tctgaatacg ttggtggagt cagccgcgcg gctttgcgag
     2161 gccgatatgg catcgatcaa ccgtcagcac ggtaacgcct atcggc
//
LOCUS       DATDHO010000890         5821 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_194483, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000890 DATDHO010000000
VERSION     DATDHO010000890.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5821
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_194483"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..440
                     /locus_tag="VIY07_17545"
     CDS             <1..440
                     /locus_tag="VIY07_17545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013169202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEY6383595.1"
                     /translation="EIGTLKGYAYVTPFDRVHHMAFVYGDIADGKDVLARLHRADVIG
                     DVFGGAKPIRAALRRFKATGRGVIVFLRDGTAGVPVAEIPHEGDTGADVARSKQWREI
                     GLGAQILKDLGISSIRLLTSSKRTYVGLGGFDIEIVSTEPIEN"
     gene            633..1385
                     /locus_tag="VIY07_17550"
     CDS             633..1385
                     /locus_tag="VIY07_17550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HEY6383596.1"
                     /translation="MRPGAIPVDVELVIAVDVSYSMDPDEQALQREGYVLALTSKEFL
                     QALRQGAHGKIAITYFEWAGAFDQKIVMPWRLIDGPEAADAVAAEIARAPYRRASRTS
                     ISGALRFAQPLFNDSGYKGLRRVIDVSGDGANNAGPLVASTRDEVLAAGITINGLPIM
                     LKRPYAGTMDLEELDVYFEECVIGGPGSFVIPIREREKFIEATRTKLILEIAGRQPEA
                     RIVPAASKARRVSCTIGERLWQERWGGGIDYQ"
     gene            complement(1404..2642)
                     /locus_tag="VIY07_17555"
     CDS             complement(1404..2642)
                     /locus_tag="VIY07_17555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEY6383597.1"
                     /translation="MTEHLNIVRLGHRGDGVADTPEGPVYVPFTLPGETVTVERVAGH
                     PDRRHLLHVDKQSHERSTPVCKHFGVCGGCSLQHWSLAEYHLWKRSLVVEALAQAGVV
                     APVDDLIDAHGAGRRRAVLHARRGNRDVLEVGFTAPRAHHVVAIDACPILAPGLGGAI
                     RAAWAIAETLKTARKPLDIQTTATDSGLDVDLRGSGALEADRLATLARVAEAHDLARL
                     TRHGELVAQRTQPLLQIGRSRVPLPPGSFLQATAEGEATLARLVAGHTGTAKRVVDLF
                     AGIGTFALRLAERARITAADSDADVIKALERAAGSTAGLKPIDAHVRDLFRRPFVASE
                     LKVFDALVFDPPRQGAMAQARELAKSTVPVVVAVSCDAATFARDAKTLIDGGYTLDRV
                     TPVDQFRYSHHVEIVAKFQK"
     gene            complement(2635..3366)
                     /locus_tag="VIY07_17560"
     CDS             complement(2635..3366)
                     /locus_tag="VIY07_17560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003614085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEY6383598.1"
                     /translation="MSTRQRADRLLVERGLFDSRAKAQAAIAAGLVTADERIVRKPSE
                     EIPVDAALRAGAAHPYVSRGGVKLAAALDHFRFEPRDRVCLDVGASTGGFTQVLLDRG
                     ARRVYSIDVGHGQMHESLRARPEITSIEDTDIRSLSPARLDEAPELVTVDVSFISLKL
                     ALPPAIALAKIPAKLVALIKPQFEAGARAAKKGVVRDKAVHASVCDDIAGFVVGLDWR
                     VLGIIPSPIQGGDGNAEFLLGAVRD"
     gene            3493..3669
                     /locus_tag="VIY07_17565"
                     /pseudo
     CDS             3493..3669
                     /locus_tag="VIY07_17565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561236.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
     gene            complement(3681..5603)
                     /gene="dxs"
                     /locus_tag="VIY07_17570"
     CDS             complement(3681..5603)
                     /gene="dxs"
                     /locus_tag="VIY07_17570"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEY6383599.1"
                     /translation="MTENSKTPLLDRISLPRDVKNLSLDQLKQLANELRYETIDAVAK
                     TGGHLGAGLGVIELTVALHSIFDTPADRLIWDVGHQSYPHKILTGRRDRIRTLRQGGG
                     LSGFTKRAESEYDPFGAAHSSTSISAALGMAVARDLEGRKHNVVAVIGDGAMSAGMAY
                     EAMNNAGARSERLIVILNDNDMSIAPPVGAMSAYLARLISGKTYRTLRDIGRQLARHL
                     PKFFEEKAGRAEEFARGFWTGGTLFEELGFYYVGPIDGHNLDHLLPVLRNVRDAEAGP
                     ILVHVVTQKGKGYTPAETSADKYHGVVKFDVATGTQAKSKASAPQYTKVFAESLIKEA
                     RKDDKIVAITAAMPSGTGLDLFEKEFPHRCFDVGIAEQHAVTFAGGLAAEGYKPFAAI
                     YSTFLQRAYDQVVHDIAIQRLPVRFAIDRAGLVGADGPTHAGAFDVTYLGCLPGFVLM
                     AAADEADLVHMVATAAAIDDRPSVVRYPRGEGLGVPMPAEGSPLEIGKGRIVQEGDKV
                     ALLSYGARLGECLTAARQLKALGLSTTVADARFAKPLDVELVSRLVREHEVLITIEEG
                     AVGGFGAYVLQTLAEQGALDQGLRVRCMVLPDQFIDQDTPGAMYAAAGLDARAIVAKV
                     FEALGKDAGAETVKLA"
     gene            5587..>5821
                     /locus_tag="VIY07_17575"
     CDS             5587..>5821
                     /locus_tag="VIY07_17575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383600.1"
                     /translation="MEFSVTNDSNELEKQQVRAGDAGPTGPVAYTKIAIAGNSTNGFL
                     VSAPYSEIPVKWCCYQSTSKGVLPVGLPLASRVI"
BASE COUNT         1172 a         1790 c         1783 g         1076 t
ORIGIN      
        1 cggaaatcgg cacgctcaag ggctatgcct atgtaacgcc cttcgaccgt gttcatcaca
       61 tggcctttgt ctacggcgat atcgctgatg gcaaggacgt gctggcgcgg ctgcatcggg
      121 ccgatgtcat cggcgatgtg tttggcggcg caaagccgat ccgcgctgcg cttagacgct
      181 tcaaagcaac cggccgcggt gtgatcgtgt tcctgcgcga cggcacggcc ggcgtgccgg
      241 tcgcagaaat tccgcacgaa ggcgacaccg gtgccgatgt cgcacgttcg aagcagtggc
      301 gggaaatcgg gctcggtgcg cagatcctca aggatctggg gatatcttcg atcaggctgt
      361 tgacctccag caagcgaacc tacgtgggcc ttggcggctt cgacatcgag atcgtatcga
      421 ccgagccgat tgaaaactga tcgaaattcg aaagcgctca tgattcgaaa aacaaccaaa
      481 acagagtccg aggccttttt ttcgcctgtg cgacatgcca gcattcggct atgggcacag
      541 gttcgcgcaa tctgaccatc gcggtggcca tcgccgccct gactctcggg ctcgcgggac
      601 cggccgcccc gaccacgcgg catttcgcgg atatgcgccc aggcgcaatc cctgtcgacg
      661 tggagctcgt catcgctgtc gatgtgtcct actccatgga ccctgacgag caggcgctgc
      721 aacgagaggg ctacgttctc gcgctcacct caaaagagtt cctgcaggcg ttgcgccagg
      781 gagctcatgg caagatagcg atcacttatt ttgaatgggc cggcgcattc gaccagaaga
      841 tcgtgatgcc atggcgattg atcgacgggc cggaggctgc cgatgcggtc gccgccgaga
      901 tcgcgcgcgc gccataccgg cgcgcctcgc gcacctccat ctcgggcgcg cttcgctttg
      961 cccagccgct gttcaatgac agcggctata aaggcctgcg ccgcgtgatc gacgtgtccg
     1021 gcgacggcgc caataatgcc ggcccgctgg tcgcgtcgac ccgggatgag gtgttggctg
     1081 ccggcatcac gatcaatggc ctgccgatca tgctcaagcg accctacgcc gggacgatgg
     1141 atctcgagga gctcgacgtt tacttcgagg aatgcgtcat tggcgggcct ggttcttttg
     1201 tcattccaat tcgcgagcgg gaaaagttca tcgaagcaac gcgcacgaaa ctcatcctcg
     1261 agattgccgg ccgacagccg gaagcccgaa tagttcccgc tgcgtcgaaa gcccgtcgcg
     1321 tttcgtgcac aatcggcgaa aggttgtggc aggagcgctg gggcggcggc atcgactatc
     1381 agtagagcgc caggacgtga gcgtcacttc tgaaactttg cgacgatctc cacgtgatgc
     1441 gaataacgga actgatcgac cggggtgacg cgatcgagcg tgtaaccgcc gtcaatcaga
     1501 gtttttgcgt cacgagcaaa agtcgccgca tcgcacgata ctgcaacgac aaccgggacc
     1561 gtgcttttgg caagctcgcg tgcctgcgcc atcgcgccct ggcgcggtgg atcgaacaca
     1621 agggcgtcga ataccttcaa ttcactcgct acgaatggac gccggaagag gtcgcgcaca
     1681 tgcgcatcga tcggcttaag cccggctgtg ctccctgccg cacgctccaa cgcctttatg
     1741 acatctgcat cgctatccgc tgcggtgatg cgcgcgcgct cggcgagacg taacgcaaaa
     1801 gtcccgatcc cggcaaaaag gtcgacaaca cgttttgctg tcccggtgtg gccagccacc
     1861 agacgcgcca gcgttgcttc gccttcggcg gttgcctgca ggaacgaacc gggcggcaat
     1921 gggacacggg atcggccaat ctgcaaaagc ggctgggttc gctgtgccac gagttcgcca
     1981 tggcgggtga gacgggcaag gtcgtgggct tcggcgacac gcgcaagcgt cgccagccgg
     2041 tcggcctcga gcgcgccgga gccgcgcagg tcgacgtcga ggccggaatc cgttgcagtc
     2101 gtctggatat ccagcggctt gcgggccgtc ttcaatgttt cggcaatcgc ccatgccgcc
     2161 cgaatggcgc cgccgagacc aggcgccaaa atggggcagg cgtcgatcgc caccacgtga
     2221 tgagcgcgcg gagccgtgaa gccaacttcc agaacgtcgc gattgccgcg ccgggcatgc
     2281 agcacggcgc ggcggcggcc cgcaccatga gcgtcaatga ggtcgtcgac cggagcgacc
     2341 acacctgcct gcgccagggc ctcgaccacg agcgagcgtt tccataggtg atattctgca
     2401 agcgaccagt gttgcagcga gcagccgccg cagacaccga aatgtttgca aacgggcgtg
     2461 ctgcgttcat ggctctgctt gtcgacatgc aacagatgcc ggcggtccgg gtggccggcg
     2521 acccgctcga ccgtgacggt ctcgccgggc agcgtaaacg gcacgtagac tggaccttcg
     2581 ggcgtgtcgg cgacgccgtc tccgcgatga ccaaggcgaa cgatattgag gtgctcagtc
     2641 acgcacggcc cccagcagga actcggcatt gccgtcacca ccttggatgg gcgagggaat
     2701 gatcccgagc acccgccagt cgagcccgac aacaaaaccg gcaatgtcat cgcaaacact
     2761 ggcgtgcacg gctttatcgc gcacgacgcc cttcttcgcg gcgcgggcgc cggcttcgaa
     2821 ttggggcttg atcagcgcaa caagctttgc gggaattttg gcgagcgcaa tcgccggcgg
     2881 cagcgccagt ttgagagaaa tgaagctgac gtcgacggta acaagttccg gtgcttcgtc
     2941 gagccgggca ggcgagagcg aacggatatc ggtgtcttcg atcgacgtaa tttccggcct
     3001 tgcgcgcaag gactcatgca tctgcccatg accgacatcg atcgagtaaa cacgccgcgc
     3061 gccgcgatcg agaagcacct gggtaaatcc accggtcgag gcaccgacat caagacaaac
     3121 gcgatctcta ggctcaaacc gaaaatgatc cagcgccgcc gccagcttga caccgccccg
     3181 cgagacatat ggatgtgctg cgccggcccg taacgccgcg tcgaccggga tctcttccga
     3241 aggcttgcgt acaatccgtt cgtcggcagt gacgaggcct gccgcaatag cggcctgtgc
     3301 cttggcgcgg ctgtcaaaca gaccgcgctc gaccagcagg cgatcggcgc gttgtcgcgt
     3361 gctcaaagat caattctccg acgcgttgca taagcgtctc gcgggaacaa tgttccgcgc
     3421 acgacggtta tctgcgtggc gccgctagca cttgcaacgg ctgccgttat tgtcgttctg
     3481 aggagaagca gtatggcacg tagatattca agaggcgctt cgaaagacgt ggagcgcgca
     3541 atgcggaaac gcaagagagg cacgctcaaa agcgggcgga gcggcaggaa ggtcaagagc
     3601 cgcaagcaag ccatagcgat cggtctctcg gaggcgcgca gaaaaggaaa gaaagtaccc
     3661 cgcaagagaa gactataact tcaagccagc ttgacggtct cggcgccggc atcttttccc
     3721 aaagcttcaa acacctttgc aactatggcg cgggcgtcga ggcctgccgc cgcatacatt
     3781 gcgcccggcg tgtcctgatc gatgaactga tcgggaagaa ccatgcagcg aacgcgaagg
     3841 ccctgatcaa gcgctccttg ctcggccaag gtttgcagga cgtacgcgcc gaagccgccg
     3901 accgcgcctt cctcgatcgt aatcagcact tcatgttcgc gcaccagacg cgaaacaagt
     3961 tcgacatcga gaggtttggc gaaccttgcg tcagcgaccg tagtcgacag accaagcgcc
     4021 ttgagctgcc tggctgccgt caggcactcg ccaagccggg caccgtacga caatagcgcc
     4081 accttgtcgc cctcctgcac gatgcggccc ttgccgatct cgaggggtga gccttccgcc
     4141 ggcatcggca ccccaagtcc ttcgccgcgg gggtatcgca caacgcttgg acgatcgtcg
     4201 attgcggctg ccgttgccac catgtgcacc aggtctgcct catccgctgc tgccatcagg
     4261 acgaatccgg gaagacagcc aagataagtg acgtcgaaag cgccggcatg ggttggcccg
     4321 tccgcgccca ccaggcccgc gcgatcgatt gcgaagcgga ccggcaggcg ctggatggca
     4381 atatcgtgca cgacctgatc ataggcccgt tgcaagaacg tggagtagat cgcagcaaac
     4441 ggcttgtatc cttccgcagc cagaccgccg gcgaaagtta cggcgtgttg ttcggcaatg
     4501 cccacgtcga agcagcggtg gggaaattct ttttcgaaca ggtcgagacc ggtgccggat
     4561 ggcattgccg ccgtaatggc gacgatcttg tcgtccttgc gcgcctcttt gatcaagctc
     4621 tcggcaaaca cctttgtata ctgcggagca ctggccttgg actttgcctg agtcccggtc
     4681 gcgacatcga atttcactac gccgtgatat ttgtcagcgg atgtttcggc cggcgtgtaa
     4741 ccctttccct tctgggtgac cacgtggacg agaatcgggc ctgcttcagc gtcgcgcacg
     4801 ttgcgcaaga cgggaagcag gtggtcgagg ttgtgcccgt cgatcgggcc gacgtaatag
     4861 aagcccagct cctcgaacag ggtgccaccg gtccaaaacc cgcgcgcgaa ttcttcggcc
     4921 cgcccagcct tttcctcgaa aaacttcgga agatggcggg ccaattgcct cccgatatcc
     4981 ctcaacgtcc ggtaggtttt gccggagatc agccgcgcga gatatgccga catggcgccg
     5041 actggcggtg cgatcgacat atcattgtca ttgagaataa cgatcaatcg ttcacttcgg
     5101 gcaccggcat tattcattgc ttcgtaggcc atgcctgccg acattgcccc atcgccgata
     5161 actgcgacga cgttgtgttt cctgccctcg aggtcgcgcg cgaccgccat gcccagcgcc
     5221 gcggagatgg atgtggatga atgggcggcg ccaaacgggt cgtactcgct ctcggcacgc
     5281 ttggtgaagc ctgacaatcc accaccctgg cgcagcgttc gaatgcggtc gcggcggccc
     5341 gtcaagatct tgtgcggata actctggtgc ccgacgtccc agattaatct gtcagccggg
     5401 gtatcaaata tggaatgcaa ggcgaccgta agctcgatga ctccgagacc cgcgccgaga
     5461 tgcccgccgg ttttggcgac ggcatcgatg gtctcataac gcaactcatt cgccagctgc
     5521 ttgagctggt cgagcgacag gttcttcacg tcccgcggca gcgagatgcg gtcgagcagg
     5581 ggggtcttgg aattctcggt cacgaacgac tccaacgaac tcgaaaaaca acaggtccgc
     5641 gctggtgacg caggaccgac cgggccagtg gcttacacca aaattgccat tgcgggcaat
     5701 tccaccaatg gctttcttgt ttccgcgcct tactcggaaa tccccgtcaa atggtgctgt
     5761 tatcagtcga cgtccaaagg cgtgctgccc gtaggtctgc cgttggcatc aagggtaatc
     5821 c
//
LOCUS       DATDHO010000891         6372 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_90936, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000891 DATDHO010000000
VERSION     DATDHO010000891.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 6372)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6372)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6372
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_90936"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..895
                     /locus_tag="VIY07_17580"
     CDS             182..895
                     /locus_tag="VIY07_17580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HEY6383601.1"
                     /translation="MPRRSRRQTNAFDTAGRVAAAIGRHPREFVAVVMATLAAFAIVA
                     NALFLQKGPHPAPIFPTRPLLQHEVALPPRLQPPQSTAAIEAGNQAKLIANIQRELSR
                     KGFYDGPADGIWGAKTDAAVRDFIHAAGLKTNVEPSDGLLRTIVASNARAPNPAVSPN
                     VAPDPIAKLIAPSKRVMAVQRALADFGYGQIKPTGIFDPDTRVAIEKFERDRRLPVTG
                     QISDRVVRELAALTGRPLE"
     gene            932..1291
                     /locus_tag="VIY07_17585"
     CDS             932..1291
                     /locus_tag="VIY07_17585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1491 family protein"
                     /protein_id="HEY6383602.1"
                     /translation="MRLKSGIWVAAYLRRCAVEGVFAAVRRRGAEEAGAIFIKINRLD
                     GTGVLYGPAPQSEFGEARPAERIFTAAIGQSKSATDLEIEARLVKEIRFDPDLWIVEV
                     EDRSGRSFLDNVIKDSI"
     gene            complement(1288..2067)
                     /locus_tag="VIY07_17590"
     CDS             complement(1288..2067)
                     /locus_tag="VIY07_17590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383603.1"
                     /translation="MLTDLYVQKPVHSPEEETQFVELALGLVDAVDTQTRATVAATLA
                     AYPAAPEVVVGRLNTSISSRAAAGGKTGQDDLIDLFFSASPEERRLILVNLEFVSRNT
                     ARRAFPVAGELLRRLESAALKSDPGEFSRVLERALGISRELADKITRDYSGETIVVVA
                     KAIGLKSEVLQRILLCLNPIIGQSTRQVYELSRLFDEISPASAEYMLGIWRTSSRRHS
                     IHASVYWNDERSGPRSSTKPTSHRGAAKSEESRLRYRSNER"
     gene            2304..2495
                     /locus_tag="VIY07_17595"
     CDS             2304..2495
                     /locus_tag="VIY07_17595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383604.1"
                     /translation="MGEVIRFPDEVSPRGKYVDANTEPATVIILPVIRIERGPDGSNG
                     LEPDTGNNAGRRRRRRAAR"
     gene            2458..3342
                     /locus_tag="VIY07_17600"
     CDS             2458..3342
                     /locus_tag="VIY07_17600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383605.1"
                     /translation="MRAVAGVVVQRVERKLRQPIPINSPGLPLTGIHIWRRIFLLVAF
                     GLITGCANSDFGQVNQTLVTDGIHDWIGRDAPPAKSKPSTFEYTDDERALRDNAYPLI
                     EPPYDRQQWYSVAGEYGLIKFDLADHRKYFDRLMEECHRSPSAVYARLIDDIRNDTTR
                     LSQFFETAGRVIERQKSLVYISALSKAERANALRRIRENIHVLDIVRVSLANRVISYR
                     FALEHLVIMTPQVQAVDAERLLNQLQVQISRYDTLPLTWCASRASPRLANALLARACR
                     LGRSYRRTRGLRLLCRAF"
     gene            complement(3265..3864)
                     /locus_tag="VIY07_17605"
     CDS             complement(3265..3864)
                     /locus_tag="VIY07_17605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HEY6383606.1"
                     /translation="MVRWALLILGGVLLGGIVHLATVMILPRTATQDAYARLTPIAPV
                     NTVVALPAPTPEKAVMPFMDPAFASAVCRYDLSQGPLKLTVPVSPGYTSVSFYTRYDV
                     AYYAINDRAAGRRIIELDLMTTAQHDQVPEDEEVTAADRLIVESPTLTGLIAIRALAA
                     EPGLMRVAQSTVAASKCATQQPEPPRPPVRPPEPARPRK"
     gene            complement(3864..4442)
                     /locus_tag="VIY07_17610"
     CDS             complement(3864..4442)
                     /locus_tag="VIY07_17610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1214 domain-containing protein"
                     /protein_id="HEY6383607.1"
                     /translation="MRLLFGTLFGLAVAAGVGLGLTYYSLTHGTAFGGLSIESWTAWP
                     KSGTTDADPYVRASIARTGRLPTAMGDGVSFTLSSDDDGKALDGRCEVVVSGITPTAR
                     FWTLTLYNPDGALVANSTNRYGFTSQELVRRSDGSFDIVVAPRANPGNWLPTGGVERY
                     ELVLRLYDTAVGVSTKAGREVPMPDVTTRNCP"
     gene            complement(4503..>6372)
                     /locus_tag="VIY07_17615"
     CDS             complement(4503..>6372)
                     /locus_tag="VIY07_17615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HEY6383608.1"
                     /translation="PDHLVKAVLSTEDRRFYEHFGIDLPGTARALVANTRAGGVVQGG
                     SSITQQLAKNLFLNNERTIERKVKEAFLAMWLEARLTKNEILKLYLDRAYMGGGAFGV
                     DAAAQYYFNKSARDVNLAEAAMLAGLFKAPTRFAPHINLPAARARANVVLDNLVEANM
                     MTEGQVFGARRHPATPVDRRDDRAPNYYLDWAFDEMRKLVDTFPKSMTERVFVVRAAL
                     DTSLQNNADAAVESSLRQYGQEYHAKQSAAVLMDVDGAVRALVGGRDYGSSQFNRATD
                     AMRQPGSSFKPYVYAAALMYGMKPTSIVVDGPVCIGNWCPQNYSHGYSGSMTLQQALT
                     QSINTIAVKLSISIGNGNAKVGRGKIVKLAHDMGLRTPLPDTPSLPIGADEVTVLDHT
                     AANAAFPNLGKAVTPHAILEVRTGTGDLVWRFDRDGPKPRQVMPPGVAADMIKMMNNV
                     VENGTGRRARLDGVAAAGKTGTTNAYRDAWFVGYTGNFVCGVWFGNDDYQVMNRMTGG
                     SLPAMTWHKIMAYAHQGIEVKQLPGLGAPQVRQQPAVAETKSKSSEPGPPPRPALLTK
                     RGADILVRVERLLDDANRALGPAPPTVSTVKGRQAEAPRSGALASSLEGRPFGNRN"
BASE COUNT         1281 a         1889 c         1931 g         1271 t
ORIGIN      
        1 cgtctgttct gcaagacgtg agacgggacc gtgagtattc tcacgcaggt ttggaattgt
       61 atcgacacgt ttgtgcaccc ctcggcgcaa agagaggtgc tgagcccttc tcatcgcgag
      121 ctgcggcgtg cggatcgtcc aaatcggcgt cccaattact gcatacaatc ggatcaaaaa
      181 agtgcctaga cggtctcgca gacaaacaaa tgcgttcgat accgcaggta gggtggcggc
      241 ggcgattggc cgtcaccccc gcgaatttgt tgctgtcgtc atggcgacac tggccgcgtt
      301 tgcgatcgtt gccaatgccc tgtttttgca aaagggcccg caccctgcgc ctattttccc
      361 cactcggcca ctgctgcagc atgaggtagc gcttccaccg cgcttgcagc ccccccaatc
      421 gacggcagcg atcgaggctg gcaatcaggc caagctcatc gccaacattc agcgcgaact
      481 ttcgcgcaag gggttctacg acggaccagc tgacgggatc tggggcgcca aaaccgatgc
      541 cgccgtgcgc gattttatcc atgccgccgg actgaaaaca aatgtcgaac ccagcgatgg
      601 ccttctgcgc acgattgttg cgtccaatgc gcgggctcca aatccagccg tgtcaccgaa
      661 cgtagcgccg gacccgatcg cgaaacttat tgccccatca aagcgggtga tggccgtaca
      721 acgggcactc gccgatttcg gttatgggca gataaagccg accggcattt tcgatccgga
      781 cactcgtgtc gcaatcgaga aatttgagcg ggatcgccgc cttccggtta cggggcaaat
      841 ttccgatcgt gtggtgcgcg agcttgccgc cctgacaggt cgtccgctgg agtgattagc
      901 gacccgacaa tcaatcgtgt tacttaagct gatgcgattg aagtccggca tttgggtcgc
      961 ggcatatctt cgtcgttgtg ccgtcgaggg tgtattcgcg gcggtgcgtc ggcgcggcgc
     1021 cgaggaggcc ggcgctatat tcatcaagat caacaggctc gatggcaccg gggtcctcta
     1081 tggacccgca cctcagtccg agtttggaga ggcaaggccc gcagagcgca ttttcacggc
     1141 cgccattggt cagagcaagt cggcgaccga cctcgaaatc gaggcgcgtc ttgtaaaaga
     1201 gattcgattc gatccggatc tttggattgt tgaggttgaa gatcgttcag gccgaagctt
     1261 cctggacaac gtcatcaagg actcgatcta acgttcgttg cttctgtagc gcaggcgcga
     1321 ctcctcgctt tttgcggcac cgcgatgcga agttggtttt gttgaggagc gcggaccact
     1381 ccgttcgtca ttccagtaga cagaggcgtg aatcgaatga cgccgtgaac tcgttcgcca
     1441 gatgccgagc atatattcag ctgatgcagg gctgatctcg tcaaacaaac gggatagctc
     1501 gtaaacctgg cgggtcgatt gtccgatgat agggttcaga cataacagaa tgcgctgaag
     1561 cacctcgctc tttagcccga tcgccttcgc cacaacgacg attgtctccc cggaatagtc
     1621 gcgcgtgatc ttgtcggcca gttcgcgact aatcccgagg gcgcgttcca atacgcggct
     1681 gaactcgccg ggatcgctct tcagggccgc gctttcaagt cgacggagca gttcgccggc
     1741 aacagggaaa gcgcggcgcg ctgtgttcct ggatacgaac tccagattga caagtatgag
     1801 tcgtcgctct tcgggagagg ccgaaaagaa caggtcgatc aaatcatctt ggccagtttt
     1861 gccacctgct gcggcgcgcg aggagattga ggtgttcaac ctgccaacaa cgacctcggg
     1921 agccgcggga taggccgcca aggtggccgc cacggtggcc cgagtttgcg tatccaccgc
     1981 gtcgacaagt cccagcgcca gctcgacgaa ttgcgtttct tcctcagggc tatggacggg
     2041 tttctggacg tagaggtcgg tcagcacgcg cagcagggtg ggacggatgt cgacaccgtc
     2101 ccggcacgcc agatcaacta ggctgtccag gggattggac gaggaaggct tcaccataac
     2161 gactaacgct acgccactgc gggatggccc agattagtcg tgcgacgtta gcggaccgtt
     2221 aaccttgcaa gtcctttaat tacagaacgg cgccgaaccg ggggcctcga ggaggcacgc
     2281 ggtcggggca gggggaactt gcaatgggcg aggtcatccg atttcccgac gaggtgagcc
     2341 cgcgcggcaa atatgtcgac gccaacaccg aacctgcgac agtcatcatt ctgcctgtga
     2401 tccgcatcga gcgtggtccg gatggatcga acggccttga acctgatacc ggcaataatg
     2461 cgggccgtcg ccggcgtcgt cgtgcagcgc gttgagcgaa agctgcgtca accgattccg
     2521 ataaattctc cgggcctgcc gctgactggc atccacattt ggcggcgtat atttctgctc
     2581 gtggcctttg gcctgattac cggctgcgcc aacagcgatt tcggccaggt caatcaaaca
     2641 ttggtaaccg atggcatcca tgactggatc ggtcgcgatg cgcctccagc caaaagcaag
     2701 ccatcaacct tcgaatacac cgatgacgaa cgcgcgctgc gcgacaacgc ttatcccctg
     2761 atcgagcctc cgtacgaccg tcagcaatgg tactccgtcg ccggcgaata cgggctgatc
     2821 aaattcgatc tggcagacca tcggaagtat ttcgatcgtt tgatggagga gtgtcaccgg
     2881 tcgccttcag cagtgtacgc gcggctcatt gacgacattc gcaacgatac cacccgtctt
     2941 tcgcagttct tcgaaactgc cgggcgcgtc atcgaacgcc agaagagcct ggtctatatc
     3001 tcagcactga gcaaggcaga gcgggcaaat gccttgcgac gtatccggga gaacattcac
     3061 gtgctggata tcgttcgcgt aagcctggcg aaccgggtga tatcctatcg gttcgcactt
     3121 gagcacttgg tgattatgac ccctcaggtt caggcggtcg atgctgaacg tctgctcaat
     3181 caattgcagg tgcagatttc caggtacgac acgctgccgc tcacatggtg cgcgagccga
     3241 gcctcgcctc ggctcgctaa cgcgctactt gcgcgggcgt gccggctcgg gcggtcgtac
     3301 cggcggacgc gggggctcag gctgttgtgt cgcgcatttt gaagcagcca cagtgctttg
     3361 tgcaacgcgc atcagaccag gctcggccgc caacgcacgg atcgcgatca gcccggtcaa
     3421 ggtcggcgac tctacaatca accggtcggc cgcagtaact tcctcgtctt ccggcacctg
     3481 gtcatgctgt gcggtcgtca tcaggtcgag ctcgatgatc cggcgcccgg ctgcgcggtc
     3541 attgatcgcg taataggcaa cgtcatagcg tgtgtaaaac gacacggacg tatatcccgg
     3601 actcaccggt acagtgagct tcaaaggtcc ctgcgaaaga tcgtatcggc agacggcgct
     3661 ggcaaaggcg gggtccataa atggcatcac cgctttctcg ggcgtgggcg caggcagggc
     3721 gacgacagta ttgaccggcg cgatgggagt gagccgagca taggcatctt gcgtcgccgt
     3781 gcgtggaagt atcatgacgg tcgcaaggtg gacgattccg ccgagcaaca ccccgcccaa
     3841 aatcagaagc gcccaacgaa cgatcatggg caattccttg tcgtaacgtc cggcatcggg
     3901 acctcacgac cagctttcgt cgaaactccc accgccgtgt cgtagaggcg cagcacaagt
     3961 tcgtatcgct caacgccgcc ggtcggcaac cagttgccgg gattggcacg aggtgccacg
     4021 acgatgtcaa agctgccatc ggaacgtcga acgagttcct gactggtgaa gccgtagcga
     4081 tttgtcgaat tagcgaccag cgcaccatcg ggattgtaga gcgtcagggt ccagaagcgc
     4141 gcggtcggcg taatgccgga cacaacgact tcgcagcgcc cgtcaagagc cttgccgtcg
     4201 tcgtcggagc tcagcgtgaa cgagacgccg tcgcccatcg cagtcggcag ccgtccggtg
     4261 cgcgcgatcg atgcacgcac gtagggatcg gcatcggttg tcccgctttt gggccaggcg
     4321 gtccagcttt caatcgacag accgccaaag gcagtcccgt gggtcaggga atagtaggtc
     4381 aggccgagtc cgacgcccgc ggccacggca agaccaaaca atgttccgaa aagcagtcgc
     4441 acgagcgatc cgttaagtaa aaagcatatt tctgccgaga atacgccggt ctgtggcgcc
     4501 aatcagttgc gatttccgaa cggacgcccc tccaatgagg aggcaagagc gccgctgcgc
     4561 ggcgcctcag cctgcctgcc tttgacagtt gaaaccgtcg gaggcgccgg tcctagcgcg
     4621 cgattggcat catccaacag gcgctcgacc cgcacgagaa tgtcggctcc gcgcttggtc
     4681 aaaagcgcag gccggggagg aggcccgggc tcgctcgact tcgatttcgt ttcagccacg
     4741 gcgggctgct gacgaacctg cggcgcccca aggccaggaa gctgtttgac ctcaattccc
     4801 tggtgcgcat aagccatgat cttgtgccag gtcatcgcgg gcagcgagcc gccggtcatg
     4861 cgattcataa cctgatagtc gtcattgccg aaccagacgc cgcagacgaa attgcccgta
     4921 taacccacaa accaggcgtc gcggtaagca ttggtcgtgc cggtttttcc tgcagccgca
     4981 acgccgtcaa gacgggcccg gcggcccgtg ccattctcga caacgttatt catcatcttg
     5041 atcatgtcgg cggcgacgcc gggcggcatt acctgccgcg gcttcggacc atcgcggtcg
     5101 aagcgccaca cgagatcgcc ggtgccggtc cgcacttcga ggatagcgtg cggcgttaca
     5161 gctttgccca aattggggaa ggcggcgttg gcggcggtgt gatccagcac cgtgacttcg
     5221 tccgccccga ttggcagcga tggcgtatcc ggcagcggcg tgcgcagtcc catgtcgtgc
     5281 gcgagcttga cgatctttcc acggccgacc ttcgcattcc cgttaccgat cgagatcgac
     5341 agcttcaccg cgattgtgtt gatcgactgt gtgagcgctt gttgcagcgt catcgagccg
     5401 gagtagccat ggctgtagtt ttgtggacac cagttgccga tgcagaccgg tccgtcgacc
     5461 acgatcgatg tcggcttcat gccgtacata agcgcggccg cgtagacgta gggcttgaac
     5521 gaagaaccgg gctggcgcat tgcgtccgtc gcgcgattga attggctcga gccatagtcg
     5581 cggccgccga ccagcgcacg taccgcgcca tcgacatcca tcagtaccgc cgcagactgt
     5641 ttcgcgtggt actcctggcc atattgccgc agcgatgact cgacagccgc gtcggcattg
     5701 ttctgcaggc tggtatcgag ggcggcgcgc accacgaata cgcgctcggt catcgatttt
     5761 ggaaaagtat cgaccagctt ccgcatctca tcgaacgccc agtcgaggta ataatttggc
     5821 gcccggtcgt ctcggcggtc cacgggcgtt gcggggtggc gccgggcgcc gaagacctgg
     5881 ccttcggtca tcatgttggc ctcgacaaga ttgtcgagca caacgttggc gcgtgcacgc
     5941 gccgccggca gattgatatg aggcgcaaat ctggtcggcg ccttgaacag gccggcgagc
     6001 attgcggcct ctgcaaggtt cacgtcccgt gccgatttat tgaagtagta ttgcgcagcg
     6061 gcgtcgacac caaacgcacc accgcccata taggcgcggt cgaggtaaag cttgagaatc
     6121 tcgttctttg tcaggcgcgc ttcaagccac atggcgagaa acgcttcctt gactttgcgc
     6181 tcgatggttc tctcattgtt gaggaacagg ttcttcgcga gctgctgggt gatggaagag
     6241 ccgccctgta cgacaccgcc ggcgcgcgta ttggccacca gtgctcgtgc cgtgcccgga
     6301 agatcgatgc cgaagtgttc gtaaaagcgc cggtcctctg tagagagcac ggccttgacc
     6361 aaatgatcgg ga
//
LOCUS       DATDHO010000892         2956 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_391308, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000892 DATDHO010000000
VERSION     DATDHO010000892.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2956)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2956)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2956
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391308"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..485)
                     /locus_tag="VIY07_17620"
     CDS             complement(<1..485)
                     /locus_tag="VIY07_17620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY6383609.1"
                     /translation="MPAAFMALLFAYPVPSLAQATKDVPRNYGIGHAATAEQIAGWDI
                     DIRPDGQGAPSGSGAVKAGEKIYMDKCAACHGEFGESAGRWPQVAQGKGTLASHDPVK
                     TVGSYFPYLSSTFDYIRRAMPFGDAQSLGNDELYAVTAYVLYLNDIVDDKFVLSKDTW
                     DR"
     gene            complement(538..1800)
                     /gene="soxC"
                     /locus_tag="VIY07_17625"
     CDS             complement(538..1800)
                     /gene="soxC"
                     /locus_tag="VIY07_17625"
                     /EC_number="1.8.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002710967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite dehydrogenase"
                     /protein_id="HEY6383610.1"
                     /translation="MADPSNTRGATRRRFLAGAAGLAAAGVTETQAENAKNLPPSVAD
                     WTRQLGEGVGVRAYGNPSKYEKNVIRRTVPWLTATPESSVSFTPLHQLDGIITPNGLC
                     FERHHGGIAEIDPEDYRLMLHGLVDKPLVFTLDDLKRLPSVNRIYFLECAANSGMEWR
                     GAQLNGCQYTHGMVHCVQYTGVTLKLLLEQAGLRAGAKWIMAEGGDSAAMNRSIPLGK
                     ALEDSLVAYRMNGEMLRPEQGYPVRLVVPGWEGNVWIKWLRRIKVGDQPWFTREETSK
                     YTDLLENGKARQFTFIMDAKSVITSPSPQAPVKQKGFNVISGLAWSGRGKIRRVDVSL
                     DGGRNWRNARIDGLVLDKACVRFYFDFEWNGEELLLQSRAMDDTGYVQPSKDALRKVR
                     GVNSIYHNNGIQTWALKRNGELENVEVG"
     gene            complement(1868..>2956)
                     /gene="soxB"
                     /locus_tag="VIY07_17630"
     CDS             complement(1868..>2956)
                     /gene="soxB"
                     /locus_tag="VIY07_17630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfohydrolase SoxB"
                     /protein_id="HEY6383611.1"
                     /translation="LALNIRDTEWNEPAFEPMKMFERGGVKVAVLGQAFPYTPVANPR
                     WMMPKWSFGIREEDVRANVEKARKAGAQLVVLLSHNGFDVDRKLATRVTGIDVILTAH
                     THDALPDVIKVGDTLLVASGSHGKFVSRLDLDVQNGIKDFRYKLIPLFADIIPPDKDM
                     ADAVAKARAPYAKDLARVIGHSESLLYRRGNFNGTFDDLICAALLKERDAEIALSPGF
                     RWGTSVLPGQAITFEDIHNATAITYPQVYRISMTGERLKEVLEDVADNLFNPDPYYQQ
                     GGDMVRCGGLGYTIDVSKPIGQRISAMTHLKSGSAIEPKKEYIVAGWASVNEGTEGPP
                     VWELVERHVAAEKNVRVLPNTSVKISGV"
BASE COUNT          587 a          910 c          836 g          623 t
ORIGIN      
        1 cggtcccaag tgtccttcga cagcacgaat ttgtcgtcga cgatatcgtt caggtagagc
       61 acataggccg taacggcata aagctcatca ttgccgagcg attgtgcgtc gccgaacggc
      121 atcgcgcggc gaatatagtc gaacgtactc gacaggtaag gaaaatagga cccgaccgtt
      181 ttcaccggat cgtgcgaagc gagtgtacct ttgccctgcg caacctgcgg ccaccgcccg
      241 gcgctttcgc cgaactcgcc atgacaggca gcgcacttgt ccatgtagat cttttcgccg
      301 gctttcaccg cgccgctacc ggagggggcg ccctgcccgt caggacgaat gtcgatatcc
      361 cagccggcga tctgctcggc cgttgcggca tgaccaatgc cgtaatttcg cggcacatct
      421 ttcgtcgcct gcgccaacga cggaacagga tatgcaaaca ataacgccat aaatgctgcc
      481 ggcatcccca ggcgcccgtg ggcacgggtc tcattttgat ggatcagaga tctgcggcta
      541 gccaacttcg acattctcaa gctccccgtt gcgcttgagc gcccaggttt ggatgccgtt
      601 gttgtgatag atcgaattta cgccacggac tttccgcagg gcgtctttgc tcggctgaac
      661 atatccggtg tcgtccatcg cacgtgactg cagcaagagc tcctcgccgt tccattcaaa
      721 gtcgaagtaa aagcgcacgc acgccttgtc cagcaccagc ccatcgatac gggcgttgcg
      781 ccagttgcgg ccgccatcga gcgacacgtc gacacgcctg attttgcccc ggccggacca
      841 ggcaagtccc gagatgacgt tgaagccttt ctgtttgacc ggcgcttgcg gcgagggcga
      901 ggtgatcact gattttgcgt ccatgatgaa tgtgaactga cgcgcctttc cattttcgag
      961 cagatccgtg tacttcgagg tttcttcgcg ggtgaaccag ggctgatcgc cgaccttgat
     1021 ccggcgcagc cacttgatcc agacgtttcc ctcccaacct ggcaccacga ggcggaccgg
     1081 atagccttgc tccggccgca acatctcgcc gttcatgcga taggcgacaa gggaatcctc
     1141 cagcgccttg ccaagcggga tcgaccggtt cattgcggcg gaatcgccgc cttcggccat
     1201 gatccatttc gcaccggccc ttagcccggc ctgctccaaa agcaatttca gcgttacgcc
     1261 ggtatattga acacaatgca ccatgccgtg cgtgtactga cagccgttga gctgagcgcc
     1321 gcgccattcc atcccggaat tggcagcgca ttcgagaaaa tagattctat tgacggacgg
     1381 aagccgcttg agatcgtcga gcgtaaagac caaaggcttg tcaacgagtc catgcagcat
     1441 gagccggtaa tcttcggggt cgatttccgc gattccgcca tgatggcgct cgaagcagag
     1501 cccgttcggc gtgatgatgc cgtccagctg atgcagcggc gtgaagctca ccgatgattc
     1561 cggcgttgcg gtaagccagg gcacggtgcg ccgaatgaca ttcttttcgt acttcgaagg
     1621 attgccgtag gcgcgcaccc caacgccttc gcccagttgc cgcgtccaat cggcgacgct
     1681 tggcggaaga tttttggcat tttcggcctg cgtctccgtt acgcctgccg ccgcgagccc
     1741 cgctgcaccg gccagaaagc gacggcgggt tgcgcctctc gtgttgctcg gatcagccat
     1801 cgatacctcc cggcagatcg cagcccaaat accacattct tttttatgaa tgtaacagga
     1861 acatccgcta aaccccggaa attttcacgc tcgtgtttgg aaggacgcgc acgtttttct
     1921 cggccgcgac atgccgctcg acgagctccc agactggcgg tccttcggtg ccttcattca
     1981 cgctcgccca gccggcgacg atgtattcct tttttggctc gatcgcgctg ccggatttca
     2041 gatgcgtcat tgccgaaatg cgctgaccga ttggtttcga cacatcgatg gtgtagccaa
     2101 gccccccgca acgcaccatg tcgccgccct gctgatagta gggatcggga ttgaaaagat
     2161 tatcggcgac gtcttcgagc acctctttca ggcgctcgcc ggtcatggaa atccggtaga
     2221 cctgcggata ggtgattgcc gtggcattgt ggatgtcctc gaaggtaatc gcctgaccgg
     2281 gcagcacgct tgtgccccat ctgaacccgg gcgacagcgc gatctcggca tcgcgctctt
     2341 tcaacagcgc ggcacaaatc agatcatcga aggtgccatt gaaattgccc cgccggtaaa
     2401 gcagcgactc gctatggcca atcacccgcg cgaggtcttt ggcgtaaggc gctcgcgcct
     2461 tcgcaaccgc atcggccatg tccttgtccg gaggaataat gtcggcaaaa agcgggatca
     2521 gcttgtagcg gaaatccttg atcccgttct gcacatcaag atcgagacgg gacacgaact
     2581 tgccatggct gcccgaggcg accaggagcg tatcgccgac cttgatgaca tcgggcaagg
     2641 catcgtgagt gtgagcagtc aggatcacgt cgatgccggt aacgcgggtg gcaagcttgc
     2701 gatcgacgtc aaagccattg tgcgagagca gcacgaccag ctgcgcgccc gctttgcgcg
     2761 ccttttcaac attggcgcgc acatcctcct cgcggatgcc aaacgaccat ttcggcatca
     2821 tccagcgcgg attggcgacc ggcgtatagg gaaacgcctg gccgagcacg gcgactttga
     2881 cgccgcccct ttcgaacatt ttcatcggtt cgaaggccgg ctcgttccac tcggtgtcgc
     2941 ggatgttgag cgccag
//
LOCUS       DATDHO010000893         1872 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_144191, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000893 DATDHO010000000
VERSION     DATDHO010000893.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1872
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144191"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            558..1490
                     /gene="mepA"
                     /locus_tag="VIY07_17635"
     CDS             558..1490
                     /gene="mepA"
                     /locus_tag="VIY07_17635"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HEY6383612.1"
                     /translation="MRAVVCLLAVLFLAAASSAVAQGKHLIDRMLPGSLNPRPLPPLK
                     NPDALSTPAKELFARKLTPFPGPPRSIGGDFDGCLAGAVSLPITGPTWQVMRPSRNRN
                     WGNPQLIRFIERLATNAKKVGWNGLLVGDMSQPRGGPMLSEHTSHQIGLDVDIWFAPM
                     PDHVQSREEREFGSATDVVAPDLRDVDPKVWTHRHTALIRTAAEDQVVVRILVNAAIK
                     KALCREAGADRTWLYKVRPWYGHAEHFHVQIACPADSAECKPPAPPLPSDGCGSELDF
                     WFKKSTLHPPPRKPRPVLTLAGLPPACKQIVKAP"
BASE COUNT          371 a          582 c          548 g          371 t
ORIGIN      
        1 cttccacgcc atcgactggg acgcgcgcgg cgacatgttc ccgccgctgg tgcactggaa
       61 ggtcgagaac ggccgtttcg tcgaatacga gctctacgcg tgttcgcggg accagccgaa
      121 ctgtccgggc ctgtgacgcg catcccgctt gcgctcccta tcagactcgg acggagatgt
      181 tgtccggggc caaagccgaa tcgcgccggg atgaaatagc cgctgccgac cgaaagcagc
      241 cccgagattg tggaaccgtc ggcgatccgg ggccgagtgt ccttgctact cagctgcaaa
      301 tcttttagga accaatcgcc cggtggaatt gttttatttt tttgcccccc acccccattc
      361 acgcacgcta caatgcatca cgctgcaggt aaaacttgaa tatttgaatt taaatcagtc
      421 ctgatcacgc cagtgtagtc cccctgcccc ctttctgcca gtaattatca agagtctggt
      481 tcttccaatt ctgaagcttc ggcatgattg caatttgatt ccagtttcct acagacccat
      541 agggagtata gttgctgatg cgcgctgtcg tttgcctgct cgccgtcctc ttccttgccg
      601 ccgcgagttc cgccgtcgcg cagggaaagc acttgattga ccggatgctt cccggctcgc
      661 tcaatcccag gcctctgccg ccgctgaaaa atccggacgc actgtcaacg ccggccaagg
      721 aactgttcgc gcgcaaattg acgccgtttc ccggaccgcc gcgctcgatc ggcggcgatt
      781 tcgacggctg cctcgccggc gccgtgtcgc tgccgatcac tgggccgacc tggcaagtca
      841 tgcggccgtc gcgtaaccgc aactggggca atccgcaact cattcgcttc atcgaacgcc
      901 ttgccacgaa cgcaaaaaag gttggctgga atggtctttt ggttggcgac atgtctcagc
      961 cgcgcggcgg gccgatgctt tctgagcaca ccagccatca aatcggcctc gacgtcgata
     1021 tttggtttgc gccgatgcca gaccacgtgc aaagccgcga ggagcgcgag ttcggctcgg
     1081 ccaccgatgt ggtcgcgccc gatctgcgcg acgttgatcc gaaagtgtgg acccacagac
     1141 atactgcgct catccgaacg gctgcggagg atcaggtggt cgtccgcatc ttagtcaatg
     1201 ccgcgatcaa gaaggcgctg tgccgcgagg ccggagctga tcgcacctgg ctttacaagg
     1261 tgcgtccctg gtatggtcac gccgagcatt ttcatgtcca aatcgcctgt ccggcagaca
     1321 gtgcggaatg caagccgcca gccccgccgc tcccaagcga cggctgcggt agcgagcttg
     1381 acttctggtt caagaaatcg acgctgcacc cgccgccgcg caaaccgaga ccggttttga
     1441 cgctggccgg gttgcccccc gcgtgcaagc agatcgtcaa agcgccgtga ttgtcgatgt
     1501 ccgcatgttc gctttcgcag agtgataatg cccaagcagc acgaccgcac cgaagaatac
     1561 agtggcggcc agatagaaat agcgccattg cgccatatgc agaagcacag tgcgcccagg
     1621 aacggcaggc cggtgtggcc tgagaagaat tggtcgctgc catagaacat ggggttgagg
     1681 aacggcgcgg gcttctgcgg atcgatgggc gacggcgcga tgtgggtcag cgacacgaac
     1741 acggcgcgca cgacgaggaa cagtgcgatc gatgtgaggc ccttcacaaa gctccggtta
     1801 tcgttgacgg gccgcccaga cgcctgcagg ctgggatacc accctcgccg gacacctgct
     1861 gggatccaaa ta
//
LOCUS       DATDHO010000894         5700 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_91086, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000894 DATDHO010000000
VERSION     DATDHO010000894.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5700
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91086"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1902
                     /locus_tag="VIY07_17640"
     CDS             <1..1902
                     /locus_tag="VIY07_17640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HEY6383613.1"
                     /translation="QTLPHVIGAVAALKRGAPQVWEDRPGNLAFEVEAGDAVATKEAF
                     AKAAQIVELTIVNQRLVTNYLDTRGVIAEYDGERHTLTVSSQGSHIIRDIIAGDVMRL
                     APEKMRVLTPDVGGGFGTKLFPYREYALAAVAAERLRRPVKWICDRTEHFLGDTHGRD
                     NISTARLAVDEKGRFLALELDIIADMGAYLSCYAPYIPWLGVGMATGPYDIPAAHVRL
                     RAAYTNTVPVDAYRGAGRPEASYLMERVVDAAAHDLDIAPDVLRRKNLIRQKSLPYKT
                     PTGKVYDSGDFAGTLARAQELVEWDGFNKRAAQSRRDGRLRGIGIATYVEACGNNGPE
                     TANLNLDSDGGVTLLIGSQSTGQGHATSYSQLVAERLDLPPERVRVIQGDTDRIRTGA
                     GTGGSSSIPVGGISVDRATRKLAEQIKEIAADALEAAITDLEIVDGSVSIAGTDRAIT
                     FADLAAHPRAAAEKLRAAEEFSVEPPTYPNGTHIAEVEIDPDTGATSIVRYIVVDDFG
                     ATLNPLLLEGQVHGGTVQGIGQALMENTVYEPSSGQLLSASLMDYPMPRAEHAPEFVF
                     ETRNVPCKTNPLGLKGAGEAGAIGSCPAVINAIIDALWRAYRIRHIDMPATPQRIWNA
                     IAAARKPGI"
     gene            2027..2470
                     /locus_tag="VIY07_17645"
     CDS             2027..2470
                     /locus_tag="VIY07_17645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY6383614.1"
                     /translation="MKFASAIAVVAVTAIGASAVLAQQDPIAARKALMKANGQSAGAL
                     AKMVKGEAPFDADAAKKAFATFEDAAAKMPNLFPDNSKTGGETAAAPKIWEDTADFKA
                     RFVKLGNDAKAATASVKDVDSLKAAFSAMANNCNGCHEVYRLKKS"
     gene            2579..3472
                     /locus_tag="VIY07_17650"
     CDS             2579..3472
                     /locus_tag="VIY07_17650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEY6383615.1"
                     /translation="MLRKLIVVGAVIALIALAAIWILTIPATVPASALGPHTPDLANG
                     KTMFYAGGCGSCHAVPKQDDKTRLGGGLALRSPFGTFHVPNISSDPTDGIGAWIEAQF
                     ITAMVKGTSPAGEHLFPAFPYTSYQRMTFGDLRDLFAYLKTLPAVTGKVRDHDVPFPF
                     NIRWGVGLWKLLFLDGKPFVPDPSQSAQWNRGAYLVNGPGHCAECHSPRNILGAIKSG
                     KRFTGGPSPDGQGGVPNITQEKLKDWSAKDIAETLETGMTPDADFVGGNMAEVVRSTK
                     QLSAADREAMATYIKSLPAEK"
     gene            3591..4520
                     /locus_tag="VIY07_17655"
     CDS             3591..4520
                     /locus_tag="VIY07_17655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY6383616.1"
                     /translation="MHPFKAVGLKLISALLFAAMSALVRKLGDVAPVGQMVFFRSAFA
                     ILPVIVIYAIRGELGSAVRTGRPLGQLGRGTLSVAGMFTNFSALTRLPLADATAIPFA
                     SPLITVALAAVVLKERVRIYRWSAVLIGFAGVIIMLVPHFDFSRYAGAGATATAAVGS
                     LFALTSAICNAGTVIQTRRLTQTETTSSIVFYFSLICAIAGALTLPFAWHSPTGRELV
                     ALIALGILGGLAHIFLTESYRYAPASVVAPFDYSAMLWALLLGYWLFGELPDKLVYLG
                     AAIVTAAGLFVIWRERQLGLKRAREAEGPPQAA"
     gene            complement(4546..4788)
                     /locus_tag="VIY07_17660"
     CDS             complement(4546..4788)
                     /locus_tag="VIY07_17660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HEY6383617.1"
                     /translation="MTPFFVQIKCELGKSYQVANALAEAEIASEIYSTAGDYDLLVKF
                     YVDSGTDIGHFVNEKVQCIPGIKDTHTIITFKAFQA"
     regulatory      5045..5152
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            5119..>5700
                     /locus_tag="VIY07_17665"
     CDS             5119..>5700
                     /locus_tag="VIY07_17665"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: protein motif:HMM:NF014198.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004417 - hydroxyethylthiazole kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HEY6383618.1"
                     /translation="MPAEGEEMHHPQAASRDDAAQAASDILVRLRARAPRVHCITNGV
                     AQSFTANVLLAAGCVPSMTLSAEEIGSFVASAQALLVNLGTFDAERREATAIALQAAT
                     TNKVPWVLDPVFVDRSEPRGAFARELIMRRPAVVRMNHAEFSALAHAAPSRESTMSYA
                     RSNRIVVAVSGETDLITDGQRIASIANGHPLMSK"
BASE COUNT         1076 a         1782 c         1745 g         1097 t
ORIGIN      
        1 cagacattgc cgcatgtcat cggcgccgtg gccgctctaa agcgtggcgc gccacaagtg
       61 tgggaggacc ggcccggcaa tctcgctttc gaggtcgagg ccggcgatgc cgtcgcgaca
      121 aaagaagcct ttgccaaggc cgcgcaaatc gtcgagttga ccatcgtcaa tcagcgcctg
      181 gtgaccaatt atctcgatac ccgcggcgtg atcgccgaat atgacggcga gcgccacacg
      241 ctgactgtca gcagccaggg cagtcacatc atccgcgaca tcatcgccgg cgacgtgatg
      301 aggctggcgc cggaaaagat gcgcgtgctc acgccggacg tgggtggcgg cttcggcacc
      361 aagctttttc cctatcgcga gtacgccctt gccgcggtcg ccgctgagcg gttgcgccgt
      421 ccggtcaaat ggatctgcga ccgcaccgag cattttttgg gcgacaccca cggccgcgac
      481 aacatttcca cggcacggct cgcggtcgac gaaaaagggc ggttcctcgc actcgagctc
      541 gacattattg ccgacatggg cgcgtatctc tcgtgctacg cgccatacat cccatggctt
      601 ggggtcggga tggcaaccgg tccctatgac attccggccg ctcacgttcg gctgcgcgcg
      661 gcctatacca atacggtccc ggttgacgcc tatcgcggcg ccggccggcc ggaggcgtct
      721 tacctcatgg aacgcgttgt cgacgcggca gcgcacgacc ttgacatcgc cccggatgtc
      781 ttgcggcgga aaaatctgat ccggcaaaaa tcgctgcctt acaagactcc caccgggaag
      841 gtttacgatt cgggcgattt cgccggtacg ctcgcgcgcg cgcaggagct cgtggaatgg
      901 gatggcttca acaagcgtgc ggcgcaatcg cgacgcgacg gcaggctgcg cggcattggt
      961 atcgccacct acgtcgaggc atgcggcaac aatggcccgg aaacggcaaa cctgaatctt
     1021 gattccgacg gcggcgtgac cttgttgatc ggctcgcagt cgaccggtca agggcatgcc
     1081 acgtcgtatt cccagctcgt tgccgagcgg ctcgacctgc cgcccgagcg cgtgcgcgtc
     1141 atccagggag acaccgaccg gataaggact ggcgcgggca ccggcggatc gagttcgatc
     1201 ccggtcggcg gcatttcggt cgatcgcgcc accaggaagc tcgccgagca gatcaaggag
     1261 atcgcggccg acgctctgga agcggccata accgatctcg aaatcgtgga cggcagtgtg
     1321 agcattgccg gcaccgaccg cgcgatcaca ttcgccgatc tcgcggcgca tccgcgcgct
     1381 gccgcagaaa agttgcgtgc agcggaagag ttcagcgtcg agccgccgac ttatccaaac
     1441 ggcacccaca tcgccgaagt cgagatcgat ccggacaccg gcgccacgag catcgtgcgt
     1501 tacattgttg tcgacgactt tggcgcgacg ctcaatcccc ttcttctcga gggccaggtg
     1561 catggcggaa cggtgcaagg catcggccag gcgctgatgg agaacacggt ctacgagcca
     1621 tcgagcggtc aattgctcag cgcgagtctt atggactacc cgatgccgcg tgccgagcat
     1681 gcgccggagt tcgtgttcga aacacgcaac gtgccgtgca agaccaatcc gctcgggttg
     1741 aagggtgcgg gcgaagcggg cgcgatcggt tcgtgcccgg ccgtcatcaa tgcgatcatc
     1801 gacgcgctct ggcgcgccta ccgcatccgc cacatcgaca tgccggcgac gccgcagcgc
     1861 atctggaacg ccatcgcggc tgcacggaaa cccggtattt aacgcgactt cctgccatca
     1921 ctatttcgtg atcggccgcg tcaacgcgtc ccttttcaaa acaggaataa ggcaattcgg
     1981 gaaggtgttt gcccgagact ggaaaaaacc tgcagggagg ttgttgatga aatttgcttc
     2041 cgcaattgcg gtcgtcgccg tgacggcgat aggtgcaagt gcggtcctgg cacaacagga
     2101 cccgatcgcc gcccgcaagg cgctcatgaa ggccaacggg cagtccgccg gcgctctcgc
     2161 aaaaatggtc aagggcgaag cgcctttcga tgcggacgcg gcaaagaagg ctttcgcgac
     2221 ctttgaggac gccgcagcca aaatgccgaa tctttttccc gataattcca agactggcgg
     2281 tgaaacggcg gccgcgccaa aaatctggga agacaccgcc gacttcaagg ccaggttcgt
     2341 caagcttggc aacgatgcca aggctgcgac tgcttcggtg aaggacgtcg atagccttaa
     2401 ggctgccttt tccgcgatgg cgaacaactg caacggctgc cacgaggtct atcgcttgaa
     2461 gaagagctga gtttcccgcc gcggcgcgat cagggcggac tgtccgaagg gacgctccgc
     2521 cctttcgctt tcagggatca gagctaacga ataagattgc acctgccgga gaggtcaaat
     2581 gctgcgtaag cttatcgtcg tcggcgcggt cattgctctc attgcgctcg cggcaatttg
     2641 gattctcacg attccggcga ctgtgccggc gagcgcattg ggaccgcaca cgccggacct
     2701 cgctaacggc aagacaatgt tctacgccgg cggttgtggg tcctgccatg cggtgcccaa
     2761 gcaggatgac aagaccaggc ttggaggcgg gctcgctttg cgctcgccgt tcggcacctt
     2821 ccatgttccc aacatttcct cggaccccac cgacggcatt ggtgcatgga tcgaagcgca
     2881 attcattacg gccatggtca agggcacttc gccggcgggc gagcatctct ttcctgcgtt
     2941 tccctacaca tcgtatcaac gcatgacgtt cggcgacctg cgcgatcttt tcgcctacct
     3001 gaaaacgttg ccggcagtga cgggaaaagt ccgcgatcat gatgtgccct ttccattcaa
     3061 cattcgttgg ggtgtcgggc tctggaaatt gctgtttctt gatggcaagc ctttcgtccc
     3121 tgacccgtcc cagtccgcgc aatggaatcg cggtgcctac ctggtcaacg gaccaggtca
     3181 ctgcgccgaa tgccactctc cgcgcaatat tctgggggct atcaaatcag gaaaacggtt
     3241 caccggcgga ccgagccccg acggccaggg aggcgtgccg aacatcaccc aggagaagtt
     3301 gaaagactgg tcagccaagg acatcgccga aacgctcgaa accggaatga caccggatgc
     3361 cgattttgtc ggcggcaaca tggccgaggt cgtgcgaagc acgaagcaat tgagcgcggc
     3421 cgaccgggag gcgatggcaa cctacatcaa gtcgttgccg gcggagaaat aatcgccccg
     3481 tcacgctcga acgtcatgtc cggacttgtc ccggccatcc acgttgatgt tgctcacggc
     3541 acaggcatga cgcctcgcgc tcggcacggc ctgtgataag aaaaccccga atgcatccct
     3601 tcaaggccgt cggcctcaag ctgatttccg cattgttgtt tgccgccatg tccgccctgg
     3661 tgcggaaact gggcgatgtc gcgccggtcg gtcagatggt ttttttccgc agcgccttcg
     3721 cgattcttcc ggtgattgtg atctatgcga tccgcggcga actgggttcg gcggtgcgca
     3781 cgggccggcc gctcggacag ctgggccgcg gcaccctgag cgttgccggc atgttcacca
     3841 acttctcggc gttgacccgc ctgccgctcg ccgacgcaac agcgattcca ttcgcgtcgc
     3901 cgctcatcac tgttgcgctc gctgccgtcg tcctgaaaga acgcgtgcgc atctatcgct
     3961 ggtcggctgt gctgatcggc tttgccggcg tcatcatcat gctggtcccg catttcgact
     4021 tcagccggta cgcgggagca ggcgccactg caaccgccgc agtcggctct ctgttcgcgc
     4081 tgacatccgc catttgcaat gcaggcacgg tgatccagac ccggcgactc acgcaaaccg
     4141 agacaacgtc atcaatcgtc ttctattttt ctctgatctg cgccattgcc ggcgcgctga
     4201 ccctgccgtt tgcctggcac tcgccgacag gccgggagct ggtcgccctt atcgcgctcg
     4261 gcatccttgg cggtcttgcc catatcttcc tgactgaaag ttaccggtac gccccggctt
     4321 cggtggtggc gccattcgac tacagcgcga tgctctgggc gctgctgctc ggctattggc
     4381 tgttcggaga actgccggac aagctggtgt atctcggcgc cgcgatcgtc accgccgcag
     4441 ggttattcgt catctggcgc gaacgtcagc tcggtctcaa gcgggcgcgc gaggcggagg
     4501 gccccccgca ggcggcttga gtgaacggct atgaatgctg tgcggtcagg cctgaaacgc
     4561 cttgaaagtg atgatggtgt gcgtgtcctt gatgccgggg atgcactgca ccttctcatt
     4621 cacgaagtga ccgatgtcgg tgccgctgtc gacgtagaat ttcaccagca gatcgtagtc
     4681 gccggcggtc gaatagatct cggatgcaat ttccgcctcg gccagggcgt tggccacctg
     4741 gtaggacttt ccaagctcgc attttatctg aacgaaaaag ggggtcatcg gcgcgctccg
     4801 aaggcctatt caattgcatg gccttacaac ccgttcattc ccgcgcaatc gggaatccag
     4861 agcatgatcg cagcgtctgc gattcccgcg gtgggtcccc gctttcgcgg ggacgaacgg
     4921 agaagggccc aatgcaatcc agcaaaaacg tgggttgctg gcaagcgggc gcgccccgga
     4981 tgacggagtt gctgcgacgg cgtcagctat tgccttggga cggcgcgcgg attacgtatt
     5041 cggcagcaat ctcgtggggt gtccggccgc tcgccgggct gagaggcaaa agccaaccca
     5101 acgaacctga tccgggtcat gccggcggag ggagaagaga tgcatcaccc gcaagccgca
     5161 tcgcgcgatg acgccgcgca agctgcgtcc gacatccttg tgcgtctgcg cgcccgcgcc
     5221 ccgcgcgtgc attgcatcac gaatggtgtt gcgcagagtt tcaccgccaa cgtgctgttg
     5281 gcggcgggtt gtgtgccgtc aatgacgctg tcggccgagg aaatcggctc tttcgttgcc
     5341 agtgcgcagg cgcttctggt caatctcggc accttcgacg cggagcgccg cgaggcgacg
     5401 gcaatcgccc tgcaagcggc aacgacaaat aaagtgcctt gggtgctcga tcccgtcttc
     5461 gtcgaccgct ccgagccccg cggggcgttc gcgcgcgagc tgatcatgcg ccggccagcc
     5521 gtggttcgca tgaaccatgc cgaattctca gcgctcgccc atgctgcgcc gtctcgcgaa
     5581 tcaacaatgt cctacgcgcg ctcaaaccgg attgtcgtcg cggtgtcggg agaaaccgat
     5641 ctcatcaccg acggacaacg tattgcgagc atcgccaatg gccatccctt gatgtccaag
//
LOCUS       DATDHO010000895         1584 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_391475, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000895 DATDHO010000000
VERSION     DATDHO010000895.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391475"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VIY07_17670"
     CDS             <1..400
                     /locus_tag="VIY07_17670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383619.1"
                     /translation="WAGEIADRPGGLADKLSAMSDAGANFEFLVSRRAPDKPGTGVVF
                     LTPVKGTKQKSAAQAAGLGTTDTLHSVRVEGPDRAGLGTKMSRALADAGLNLRGISAA
                     ALGRRAVTYFAFDSATDADTAIRVLKKSLK"
     gene            complement(576..>1584)
                     /locus_tag="VIY07_17675"
     CDS             complement(576..>1584)
                     /locus_tag="VIY07_17675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEY6383620.1"
                     /translation="GFCLFISCHGLAVLKQMMRALNITARIDPLQPPLMSRRELLQLA
                     LGAGVLAFTGGVAMAASMIQRPIPRTGESLPVIGLGTWQTFDVGSSQSAREPLKAVLR
                     DFVRLQGKVIDSSPMYGNSEGVGGDLARDLGVRQQLFLATKVWTSGRDAGIRQMEESF
                     RRLRTTVMDLMQVHNLVDWRTHLDTLRRWKEQGKVRYVGVTHYTASAYDQLARVLETE
                     DLDFVQLNYSIVERDAERQLLPLAADKRVAVLVNRPFAGGGLFSKLRGKPLPPWAQEI
                     DCASWAQFLLKFVISHHAVTCAIPATSKVQHLTDNMGAGVGKLPDAGIRERMLRYVAE
                     L"
BASE COUNT          333 a          457 c          474 g          320 t
ORIGIN      
        1 atgggcgggt gaaatcgcag atcgcccggg cggactggct gacaaattga gcgccatgag
       61 cgatgccggc gcaaatttcg agtttcttgt ctcgcgccgc gctcccgaca aaccgggcac
      121 aggagttgtt tttctcactc ccgtcaaggg aacgaaacag aagagcgctg cccaggcagc
      181 cggcctcggt acgaccgaca ccctacattc agtgcgtgtg gaaggtcccg accgggcagg
      241 tctgggcaca aaaatgagcc gtgcccttgc cgatgccggc ctcaaccttc gtggtatctc
      301 ggccgccgcg ttgggacggc gtgccgtgac gtattttgct tttgacagcg ctacggatgc
      361 agacaccgcc atccgcgtct tgaagaaatc gttgaagtga acaggttccc cggtcggcag
      421 cgaggcaccc gaagcgagtg ggagggggac tggatttcaa ggttcaatgt tcaacgtccg
      481 aaacgagttc aaactttgaa cctcgaaccc gttcgacgag ctcaggggat gcattgaacc
      541 ttgaacgccc ttgtggattt gcagctgctc gggcgtcaca gctcggcgac atagcgcaac
      601 atgcgttcgc ggatgccggc gtcgggaagc ttacccacgc ctgctcccat gttgtccgtc
      661 aaatgctgca ctttactcgt cgccgggatg gcgcaggtaa cggcgtggtg ggaaatcaca
      721 aatttcagta agaactgcgc ccagctggcg cagtcgattt cctgggccca tggcgggaga
      781 ggcttgccgc gtagtttgct gaacaatcct cctccggcaa acgggcggtt caccaggacg
      841 gcgacgcgtt tatcggcggc aaggggcaat aactggcgtt cggcgtcgcg ctcgacgatg
      901 gaataattga gctgcacaaa atcgagatct tcagtctcta gcacgcgggc gagttggtcg
      961 taggcgcttg cggtgtagtg ggttacgccg acatagcgaa ccttgccttg ctccttccag
     1021 cgcctgaggg tgtccaggtg agtgcgccaa tccaccaggt tgtgtacctg catcagatcc
     1081 atcaccgtcg tgcgcaagcg ccggaatgat tcttccattt gccggatgcc ggcgtcgcgc
     1141 ccgctggtcc aaactttagt ggcgagaaat aattgctgcc gaacgcccaa gtcgcgtgca
     1201 agatcgccgc cgacgccttc tgagttgcca tacatcggcg aggagtcgat gaccttgccc
     1261 tggaggcgca cgaagtcacg caacaccgct tttagcggct ctcgcgcaga ttgcgaacta
     1321 ccaacgtcga aggtttgcca ggtgccaaga ccgatgacgg gtaacgactc tcccgtgcgc
     1381 ggaatcggcc gctggatcat tgaagccgcc atcgcaacac ctcctgtgaa cgcgagcacg
     1441 ccggcaccta acgctagctg cagcagctcg cgtcgtgaca taagcggcgg ttgtaacgga
     1501 tcaattcgcg ctgttatgtt taaggctctc atcatttgtt taagaaccgc gagcccgtga
     1561 caagagataa ataggcaaaa ccca
//
LOCUS       DATDHO010000896         1783 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_441449, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000896 DATDHO010000000
VERSION     DATDHO010000896.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441449"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..255)
                     /locus_tag="VIY07_17680"
     CDS             complement(<1..255)
                     /locus_tag="VIY07_17680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEY6383621.1"
                     /translation="MPVQRGLGRRRGEELAFLPAALEIVETPPSPIGRTIGATIILLF
                     CVALIWAWAGTIDMGASATGKIVPSGRTKVIQPFETGVVRS"
     gene            complement(293..>1783)
                     /locus_tag="VIY07_17685"
     CDS             complement(293..>1783)
                     /locus_tag="VIY07_17685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEY6383622.1"
                     /translation="HTTNRIDVELGARLFHHLLALPMAYFQARRVGDSVARVRELENI
                     RNFLTSSALTLVIDLFFTIVFLAVMFLYSPLLTWIVLGSFPFYIAISMGVTPLFRQRL
                     AEKFQRGAENQAFLVESVTGIETLKAMAVEPQMQRRWEEQLAGYVASSFRVLSLGNTA
                     SQVVQLVSKIVTASILYFGAKLVIEGSLSVGELVAFNILAGRVNTPVLRLAQIWQDFH
                     QARLSVARLGDILNTTAEPTYMAARARPPVIRGNIKFDHVTFRYRVDGQEILHDVSFD
                     VPAGQMVGIVGPSGSGKSTFAKLVQRLYVPESGRVLIDGMDLAMADPAWLRRQIGVVL
                     QENVLFNRSVRENIALADPAMPMERVITAASLAGAHEFILELAEGYDTVVGERGSTLS
                     GGQRQRIAIARALVTDPRILIFDEATSALDYESERIIQLNMKEIAKGRTVLIIAHRLS
                     TVRATDRIVTLDRGRLVEDGTHDMLVRTGGRYASLHRLQAGIHEVG"
BASE COUNT          359 a          543 c          546 g          335 t
ORIGIN      
        1 ggaccgaacc acaccggtct cgaacggctg gatgactttg gtgcggccgc tcggaacgat
       61 ttttccagtc gccgatgcac ccatatcgat ggtgcccgcc caggcccaga ttagagccac
      121 gcagaaaagc agtatgattg tggccccgat cgtacgacca atcggcgacg gtggtgtttc
      181 cacgatttca agtgccgccg gcaagaacgc gagctcttcg ccgcgccttc tgccaagacc
      241 gcgttgaacc ggcatcacgc cgcgtcgcac ggacccgact attgcggtgc ctctaaccga
      301 cctcatggat tcctgcctgt agccgatgca atgatgcgta gcgaccgccg gtcctgacca
      361 gcatgtcgtg ggtgccgtct tcgaccaggc ggccgcggtc gagcgtgacg atgcgatccg
      421 tcgcacgtac cgtcgagagt cggtgtgcga tgatcagaac cgtccgtcct ttggcgatct
      481 ctttcatatt gagttgaatg atacgctcac tctcatagtc gagggcgctc gttgcctcat
      541 cgaagatcag aatgcgcggg tcggtaacga gcgcacgggc aatggcgatg cgctggcgtt
      601 ggccacccga gagtgttgat ccgcgctcgc cgacgactgt gtcgtagcct tccgccaatt
      661 cgaggatgaa ttcgtgcgct ccggcaaggc ttgccgcggt gatgacgcgc tccatcggca
      721 tagccggatc agcgagcgcg atattttcgc gtacagaccg gttgaacagc acgttctcct
      781 gcaaaacgac accgatctgg cggcgcaacc aggccgggtc ggccatggcg agatccatgc
      841 cgtcgatcag gacacggccg ctttctggta catacagtcg ctgcacgagc ttcgcgaacg
      901 tgcttttgcc cgaccccgag ggtccgacaa taccgaccat ctgcccggcc ggcacatcga
      961 agctgacatc gtgcaagatt tcctgtccgt caacgcgata gcggaacgtg acatgatcga
     1021 acttgatgtt gccacggatc acgggcggtc gcgcgcgcgc cgccatatag gtgggctccg
     1081 ccgtcgtgtt gaggatgtcg cccagccgcg ccaccgatag acgtgcctgg tgaaagtcct
     1141 gccagatctg cgctaggcgg agtacgggcg tgttcacccg gccggcgagg atattgaaag
     1201 cgacgagttc gccgaccgac aggctgcctt cgatgaccag cttggccccg aaataaagga
     1261 tacttgcagt gacgatctta ctgacgagct gcacaacctg gctcgcggtg ttgccgaggc
     1321 tcaggacgcg aaagcttgag gccacgtaac cggcgagctg ttcttcccat cggcgctgca
     1381 tctggggctc gaccgccatg gccttgagcg tctcgatccc ggtgacgctc tcgaccagaa
     1441 aggcctggtt ctcggcgccg cgctggaatt tctcagccag ccgctgccgg aacagcggcg
     1501 tcacccccat cgagattgcg atgtagaacg gaaaggaccc gagcacgatc caggtcagca
     1561 gcggcgagta caagaacatc accgccagga atacaatggt aaagaacaga tcaatgacga
     1621 gggtcagtgc cgagctggtg agaaaattgc ggatgttctc cagttcgcgc acgcgcgcca
     1681 ccgaatcgcc gacgcgccgc gcctggaagt aggccatcgg caaagccagc aagtggtgga
     1741 atagtcgcgc gccaagttcg acgtcgatgc ggttggtcgt atg
//
LOCUS       DATDHO010000897         4118 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_342782, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000897 DATDHO010000000
VERSION     DATDHO010000897.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4118)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4118)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4118
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_342782"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VIY07_17690"
     CDS             <1..492
                     /locus_tag="VIY07_17690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEY6383623.1"
                     /translation="IPELIMIRFAIIAALAVFMAGPAQAQDITAGSLRISAPWIRATP
                     KGASVGGGYMTIANSGNVGDRLVGGTSDVSNRLEIHEMSMEGSVMKMRPVRGLDIKPG
                     QTVELKPGGYHVMFVGLKQPLEQGQHVKATLRFEKAGDVAVDFTVKGIGAQDGGSTKA
                     HGH"
     gene            586..813
                     /locus_tag="VIY07_17695"
     CDS             586..813
                     /locus_tag="VIY07_17695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383624.1"
                     /translation="MRVVVVCAAVATMLAGAIPASAQVVVRDRDAVGHRHVDRGHHYG
                     WYKHRADCRVVKVRTRLPNGNVIIKTRRSCS"
     gene            complement(882..1466)
                     /locus_tag="VIY07_17700"
     CDS             complement(882..1466)
                     /locus_tag="VIY07_17700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY6383625.1"
                     /translation="MPAKRPAPRLALIDEPRMNDAQRTLLEAIRLGPRGASVTPRGPF
                     AVWMHAPDFGHLAQALGGHCRYKTSLSPRLSEFAILCTARLWRAQYEWYAHAPIADKA
                     GVTLRTIEDLRLGRTPKSAPKDERAIHDLIQELYKTRRVSDRTYQRVHALLGDQATVE
                     LVGILGYYALISMTLNVFRMMPPETENLAFAETK"
     gene            complement(1592..1957)
                     /locus_tag="VIY07_17705"
     CDS             complement(1592..1957)
                     /locus_tag="VIY07_17705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006725023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEY6383626.1"
                     /translation="MMFGRWTSAGLIIAFCAWSAEAVAESKHKLSGIASFYGTNYSGK
                     TARGERYDPKKYTAAHRTMPFGTRLRVTDARSRRSVVVVVNDRGPFIKGRVLDLSLAA
                     AKDLGMVDRGLVQVTAVVE"
     gene            complement(2026..2532)
                     /locus_tag="VIY07_17710"
     CDS             complement(2026..2532)
                     /locus_tag="VIY07_17710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015340036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity iron permease family protein"
                     /protein_id="HEY6383627.1"
                     /translation="MKNKAKSSDEATQSAPTLSQQFSQFAHTISVWTGHPLAFLLAVS
                     AVIVWVVTGPIFNFSDTWQLVINTGTTIVTFLMVFLIQNTQNRDTLAIQLKLSELVLA
                     MKGAENKFAAIEDLSDEELQKLHEECRARTETTLRHIEGRKTHSAQNNRRPRAAANSA
                     KTPTRKAS"
     gene            complement(2636..>4118)
                     /gene="ligD"
                     /locus_tag="VIY07_17715"
     CDS             complement(2636..>4118)
                     /gene="ligD"
                     /locus_tag="VIY07_17715"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HEY6383628.1"
                     /translation="KNALGSLLRQQPARGPLRLSESLSGPGTSLLQNACKMGLEGIVS
                     KLAEAPYAAGRGHDWIKTKCSDRQEFVVAGFMPSTADARAVGALVLGFYNGGKLEYAG
                     RTGTGFTHQMARALFRKLKPLAISETPFDTIPAEERGARKPTWVEPKMVVEVDFRGWT
                     HGNRIRQSSFQGVREDKAPKEVVREKAVAAATQTASVKRSAPVKKKNDVTVAGVHLTH
                     PDRVYWEDVSVTKQELANFYVQIWKWMRPHVVARPIALVRCPEGASGQCFFQKHARAG
                     IPTQYLHMVPEKGDEIISVDDIDGVVALVQGGVLEIHTRGTTIDKREHADRLVFDLDP
                     GPGVGWKDLVAAARDVRDRLEGIKLKCFLKTSGGKGLHVVLPVKPAPWEQAKAFCKAV
                     AEAMEADEPDRYVSTATKAKRNRKIFVDYLRNSREATAIAPYSTRARPGAPVSVPVDW
                     SELGNLKSADQYTVRNLPQRLSRMRKDPWATIGRIKQSLPKLK"
BASE COUNT          772 a         1224 c         1251 g          871 t
ORIGIN      
        1 atcccggagc tcatcatgat tcgttttgct atcatcgccg cccttgccgt tttcatggcg
       61 gggccagcac aggctcaaga catcaccgcg ggcagcctaa ggatttccgc tccctggata
      121 cgcgcgacgc caaagggcgc atcggtcggc ggcggttaca tgacgatcgc caacagcggc
      181 aatgtcggcg atcgactcgt gggcggcacg tcggatgtat ccaaccgtct cgaaatccac
      241 gagatgagca tggaaggcag cgtgatgaag atgcgacccg tccgcggcct ggacatcaag
      301 ccgggtcaga cggtggagct caagcctggc ggttatcacg tgatgttcgt tggactgaag
      361 caaccactcg aacaaggcca gcacgtcaag gcaaccctgc gttttgaaaa agcgggcgat
      421 gtggccgtcg acttcacggt gaaaggcatt ggcgcccagg acgggggttc gactaaggct
      481 cacggacact gatcgcatct tgcctgtggt taaccgcctt ccgacaggaa acatttttca
      541 ggttccggcg ttttcggtcc gggggaacga aggaggaggc tggaaatgag agtggtcgtt
      601 gtatgtgcgg ccgtggcaac aatgcttgca ggcgccattc cggcgtcggc gcaagttgtc
      661 gtgcgcgatc gggatgccgt gggtcacagg cacgtggacc gtggccacca ctatggctgg
      721 tacaagcatc gcgccgattg ccgcgtcgtg aaagtgcgca cccggctgcc gaacggcaac
      781 gtgatcatca agactcggcg aagctgctct tgagccaagg ccccagggcc ttgacgaaaa
      841 gtcccggcgt caatccgcgc cgggactttt cgtatcgacg tttattttgt ttccgcgaac
      901 gccaggtttt cggtttccgg cggcatcatc cggaatacat tgagcgtcat cgaaatcagc
      961 gcgtaatagc caagtatgcc gaccagttcg actgtcgcct ggtcgcccag cagcgcgtgc
     1021 acgcgctgat aggtgcgatc gcttacgcgc cttgtcttgt aaagctcctg gatgagatcg
     1081 tgaatcgcgc gctcgtcctt gggtgccgat ttgggcgtgc gccccagccg caggtcttca
     1141 atcgttctca acgtcacgcc ggctttgtct gcgatcggcg cgtgggcata ccactcgtac
     1201 tgggcgcgcc agagccgcgc cgtgcacaga atcgcgaact ccgatagccg cggcgacagc
     1261 gaggtcttgt agcggcaatg gcccccgagc gcctgcgcca aatgcccgaa atccggtgca
     1321 tgcatccaca ccgcgaaggg accacgtggc gtaacggatg ctcctcgcgg gcccaaccgg
     1381 atcgcttcca gcagcgtgcg ttgtgcatcg ttcattcgcg gttcgtcgat cagtgcgagg
     1441 cgcggcgccg ggcgcttggc gggcatgtgc ttgtccttga ctatccggtg gagatcggcg
     1501 ggctcggaac ggcaggctaa ccatggcccg gtgaagcacg ggcttatggc gaatatatca
     1561 caacgaggcg gagagcgcgg gaagcagaga actactcaac gacggctgtc acctggacca
     1621 ggccgcgatc gaccatgccc aaatccttcg cggcggccaa tgaaagatcg aggacgcgcc
     1681 ccttgatgaa tgggcctcga tcattgacca ccacgacgac gctgcgccgc gatctcgcgt
     1741 cggtcacgcg caggcgcgtg ccaaacggca tggtgcgatg tgcggcggta tattttttcg
     1801 gatcatagcg ttcgccgcgt gcggtcttac ccgagtaatt ggtgccgtag aaagatgcaa
     1861 ttcccgaaag cttgtgctta ctttcggcga cagcttccgc ggaccaggca caaaaagcga
     1921 ttatcagtcc ggcgctcgtc catcttccaa acatcatctg tctttggcct caagcgacta
     1981 cagtgcagtt cacttctctc gcgaataatt cgcgcagcta tggttttacg aagcctttcg
     2041 cgtcggtgtt ttggcggaat tcgcggcagc ccgcggccgg cgattattct gggcggaatg
     2101 agtcttgcgg ccctcgatgt ggcgcagcgt cgtctcggtc cgcgcgcggc actcctcgtg
     2161 cagcttctga agctcttcgt cgcttaggtc ttcgatggcg gcaaacttgt tctcggcacc
     2221 tttcatcgcc agcacgagct cggacagttt gagctggatc gcaagcgtgt cgcggttttg
     2281 cgtgttctgg atgagaaaca ccatcaggaa cgtgacgatg gtggtgccgg tattgataac
     2341 gagttgccag gtgtcgctga agttgaagat ggggcccgtc acgacccaaa cgatcaccgc
     2401 cgaaaccgcc agaaggaatg ccaatggatg gccagtccag acggagatcg tatgagcgaa
     2461 ctgcgagaat tgctggctca gggtcggggc tgattgtgtg gcttcgtcgg aggacttcgc
     2521 cttgttcttc atgacagtcg gcccaaacga caacacggcc agtggtaaaa actcatcttc
     2581 agcggaaacg cacgacaggt tcccgcgttc catcgttctc agggccaaag atttgttatt
     2641 ttaactttgg caacgactgc ttgatgcgtc cgatcgtcgc ccatggatcc ttgcgcatgc
     2701 gtgacagccg ttggggcagg tttctgacgg tatactgatc ggcgctcttt aaatttccca
     2761 attcggacca gtcgacgggc accgagaccg gcgcccccgg ccttgcgcgg gtggagtagg
     2821 gggcaatcgc cgttgcctcc cggctgttgc gcagatagtc gacgaagatt ttccggttac
     2881 gctttgcttt tgtggccgtc gatacgtagc gatccggctc gtcggcctcc atggcttccg
     2941 cgacggcttt gcagaacgcc ttcgcttgct cccagggggc aggcttgacc ggcagaacca
     3001 cgtgaaggcc tttgccgccg gaagtcttga gaaagcactt gagcttgatg ccttccagcc
     3061 tgtcgcgcac gtcgcgggcc gcagccacga ggtctttcca gcctacaccg ggacccggat
     3121 cgaggtcgaa gaccagccgg tcggcgtgct cgcgcttgtc aatggtggtc ccgcgcgtgt
     3181 ggatttcgag tacgccgccc tggaccagtg caacgacacc atcgatatcg tccacggaaa
     3241 taatctcatc ccctttttcc ggcaccatgt gaagatactg ggtcgggatg ccggcgcgcg
     3301 cgtgcttctg gaaaaaacat tgtcctgatg caccttccgg gcagcgcacg agagcgatcg
     3361 gcctggcaac aacgtgcggc cgcatccatt tccagatctg cacataaaag ttggcgagct
     3421 cctgcttggt gacgctgacg tcttcccagt agacgcggtc aggatgcgtc aggtgcacgc
     3481 cggcaacggt gacgtcgttt tttttcttga ccggtgcact gcgttttacg cttgccgtct
     3541 gcgttgccgc agccacggcc ttctcgcgca cgacctcctt cggtgccttg tcctcgcgca
     3601 cgccctggaa tgacgactgg cgaatgcgat tgccatgggt ccagccgcgg aaatcgacct
     3661 ccacaaccat cttcggctcg acccaagtcg gttttcgggc gccacgttcc tcggccggga
     3721 ttgtgtcgaa cggtgtctcg ctgatcgcaa gcggcttgag tttccgaaaa agcgcgcgcg
     3781 ccatctgatg cgtgaagccg gtgccggtgc gtccggcata ttccagcttg ccgccattat
     3841 aaaatccgag caccagtgcg ccgacggcgc gcgcgtccgc tgtcgatggc atgaagcccg
     3901 ccacgacgaa ttcttgccgg tccgagcatt ttgtcttgat ccagtcatgg ccacggccgg
     3961 cggcataagg cgcctcggca agcttggaca caattccctc aagtcccatc ttgcaggcat
     4021 tctggagcag gctcgttccc ggtccgctca gcgactcgct taggcgtaat ggccctcgcg
     4081 ccggctgttg cctgagcaag gaacccaacg cgttcttt
//
LOCUS       DATDHO010000898         4670 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_391626, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000898 DATDHO010000000
VERSION     DATDHO010000898.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4670
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391626"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            236..1018
                     /locus_tag="VIY07_17720"
     CDS             236..1018
                     /locus_tag="VIY07_17720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003611674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EcsC family protein"
                     /protein_id="HEY6383629.1"
                     /translation="MTPEDQTALKRAVQALEHPSFAARLANMVGKPIELIEHALPSFA
                     ADAISAAARKGLEAAMQVALRTLQRDPYAGSQTLHKILATASGAAGGAFGLATLPIEL
                     PISTVIILRSIMDIAKSEGEDLSDPEAMLSCMQVFAMGGHTGSDDASESGYLAVRAAL
                     AKSVTGAASFISSHGVSKEGGPALVRFIAQVASRFGFVVTEKVGAQAVPIIGAVSGAV
                     INYAFIAHFQGVARAHFTVRRLERLYGKDVVDAEYKRLSETK"
     gene            1375..2748
                     /locus_tag="VIY07_17725"
     CDS             1375..2748
                     /locus_tag="VIY07_17725"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383630.1"
                     /translation="MATGVTRRNFLNSVAVGTAAITAGQASYFAGPRPAHAAFKAKGN
                     IPDKPFKTGHITFLTGPANLLGEPGRKGHLMAAEEINAEGGLLGKRKIETIMADEAAG
                     TDANVKELRRMKLSENIDLFTGVISSGNTPALGPVAEELQVLTLFNDGCTDFLFDKAV
                     PKPKYTFRVTNIQSADGITSAVGAAKAWPNAKRVGSIQPDYSYGRNVHEHFMLAFQKL
                     VPGATAVSEAWPKLGATDFTPHITKLLSDQPELLICGLWGGDYVAFYKQALRYGLFDK
                     MKVATTLAFGGQPHAIGKDHPEGVLAGCHANYFFTHPVKGRWPINDSFVERYYKRWNE
                     YPSFESDGAYTALYLLKGAIEKANLLVGGWPEDEVIIAMLEGMGLDSPAGYIYIRPDN
                     HQGYKDTIIGMTKNDPKYEFPVWDPSSIITIPIRDITAPPNWPKPGTSHNESTAAANW
                     LKTTWLT"
     gene            2913..>4670
                     /locus_tag="VIY07_17730"
     CDS             2913..>4670
                     /locus_tag="VIY07_17730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383631.1"
                     /translation="MVFAILIVGLIVAGGQGGAGHSVGHFPSYYPHEIRIETIEPAAA
                     AKGLSEETLHAYVGAVPTFAGPIPRHIESVRSLGSIFVLSFRTTSTQFATADARCTAA
                     RGVMAVLRDEKEGGFIFHPYPVTPYHADYLHHLDRVEAAMNAVGGTSAPASEKFGAKG
                     RLATAIVRARWQLATEDADAVLEEIPAVELLASMSLSFDGWSGPPWAKEGWFEAHRLL
                     APSLDGAAREAMDDDYARLVHGETLGLAERADLERRLVATLTRGCARLVVGYTPKEEF
                     VDAAYPAGIENVAYDSLSGLNSPIFLRTVKLKEYPWNGNLHLGVRERSTGAWNPVAGF
                     SDTMGRLIWSAIGDPAMIQFPFNASWMHNRVQSVITKVEGQSGGIRVPPDARRPQPGT
                     GTLDPVGANTFASAKVVYEVLTSPFEDGSEMDAADVVYPFMFTYRWGAKANSGGDNHE
                     PRLEQTLTAMQEHVAGLKVVRVERTKHVIAENWEIFTNTPVVEVYLRGVPHDELQVAA
                     MAPPWSTIPWHLLALMEEAVKRDYAAFSKKESERRRIPWMDLVRDQDLRAKLLPLIAK
                     FERESYRPEPLREFVTAEAA"
BASE COUNT          999 a         1364 c         1395 g          912 t
ORIGIN      
        1 aatccgctca ccaaggcgga ttccggctcg ccacgcagac cggccttggc gagccaggcg
       61 gtcaatgcgt taataccgtc ctcggtcatg gccgcattgt aattggacgc gtggtgtgac
      121 cccaatcact gtcttggccc aaaaacggaa ctggaacgat tgtggcgcga tatcagtttc
      181 gggcttttag cgacgatgtt cgctttttgg gaagccgaca cggcgaaaac aacaaatgac
      241 gcccgaagat cagaccgccc tgaaacgagc agttcaagcg cttgaacatc cgagttttgc
      301 cgcgcgtctg gccaatatgg ttggtaagcc cattgaactt atcgaacacg ctctgccgtc
      361 attcgcagcg gacgccattt cagcggctgc caggaaagga cttgaggcgg cgatgcaggt
      421 cgcgttgcga accttgcagc gcgatcctta tgccggctca caaaccctgc acaagattct
      481 ggcgacggcc tcaggggctg caggtggcgc gttcggtttg gcgacgctgc ccatcgagct
      541 tccgatttcc acggtcatca tactcagatc gatcatggat attgcaaaaa gcgagggcga
      601 agatctcagt gatcctgaag cgatgctttc atgcatgcag gtctttgcaa tggggggaca
      661 caccgggtcg gacgacgcat ccgagagcgg atatttggcc gtccgagccg cactggcgaa
      721 gagcgtgacg ggcgccgcga gcttcatttc gagtcacggc gtttccaagg aagggggacc
      781 ggcgctcgtt cgctttatcg cgcaagtggc atcccgcttc ggatttgtcg tcacggaaaa
      841 ggtcggtgcc caggctgttc ccatcatcgg cgccgtgagc ggcgctgtca taaactacgc
      901 gttcattgct cattttcagg gagtagcccg cgcccacttc acggtgcgcc ggctcgaacg
      961 actttacggc aaagatgttg ttgacgctga atacaagcgg ctgtctgaga cgaagtgatc
     1021 caggcgacac gaaagccaag acgaatagcg aatttcttaa gctccgggat ctccacgtca
     1081 attcaaatcg gcaatcgcat taagccagtg cctgccctaa agccacgctg cgaaaaacgg
     1141 ctgcgcatcg atgcccacga tacctgatcg gattcgacgc cgaccaaggg atgcggcaaa
     1201 acggtatatg cttgataaat atgatataaa ctacccactt cggctcgctc gctgctctag
     1261 cgcggagcga agtccgggca taagctattt tgacaggtcg agaacgcgct tcgaaagaaa
     1321 gcccgaccgg atcattccca ttcttcgcgc ctcggtttcc cagggaggag catcatggca
     1381 accggagtaa cacgcagaaa cttcctgaat agcgttgcag ttggaaccgc cgcaataact
     1441 gccggacagg cttcttattt tgccgggcca cggcctgcac acgcggcttt caaggccaag
     1501 ggaaatatcc cggacaagcc tttcaagacc ggccacatca ccttcctgac cggccctgcc
     1561 aaccttttgg gcgagcccgg cagaaaaggt catctgatgg cggctgagga gattaatgcc
     1621 gaaggtggtc tcctcggaaa acggaagatc gaaaccatca tggccgacga ggcggcgggc
     1681 accgacgcca acgtcaaaga gcttcgccgc atgaagctat ccgaaaacat cgatctgttc
     1741 accggcgtca tctccagcgg caatactcct gccctagggc cggtcgccga ggaattgcag
     1801 gtgctgacgc tgttcaatga cggctgcacc gatttcttgt tcgacaaggc agtgcccaag
     1861 ccaaaataca cgttccgcgt gaccaacatc cagtcggccg acggtattac gtcggcggtc
     1921 ggcgcggcta aggcctggcc gaatgcaaag cgggtcggct caattcagcc ggactacagc
     1981 tatggtcgca acgtgcatga acatttcatg ctggcgttcc aaaagctggt tcccggagcg
     2041 accgccgtct ctgaggcgtg gccaaagctc ggcgcgactg acttcacccc gcacatcacc
     2101 aagctgctat cggaccagcc ggaactgctg atctgcggcc tatggggcgg agactacgtc
     2161 gcgttctaca agcaggcgct gcgctacggt ctgttcgaca agatgaaggt cgccaccaca
     2221 ctggcattcg gcggtcagcc gcacgcaatc ggtaaagatc accccgaagg ggtgctcgcc
     2281 ggctgccacg ccaactactt cttcacgcat ccggtgaaag ggcgctggcc gatcaacgac
     2341 tcgttcgttg agcgttacta taagcgttgg aacgaatatc cgagtttcga gtcggacggc
     2401 gcttatacgg cgctttacct gctaaagggc gcaatcgaga aggccaatct gcttgtcggt
     2461 ggttggcctg aggatgaagt catcatcgcc atgctcgagg gcatgggatt ggattcgccg
     2521 gcaggctaca tctacatacg gcccgacaat catcaggggt acaaagacac gatcatcggg
     2581 atgaccaaga acgatcccaa gtatgaattc cctgtttggg atccgagctc gatcatcacg
     2641 attcccattc gggacatcac agcgccgcct aactggccga agccgggcac gtcgcacaac
     2701 gagtccaccg cggcggccaa ctggctgaag accacttggc tgacgtaaag taacttgatt
     2761 ggagcggccg tgttttacta cgcggccgct tcttcccgag cgaaagcaag attctggcga
     2821 tgcacccggg cattgatagg ccggtggggc gaaggtcgtt ttcagatcga ctcgcgccgc
     2881 gccatctgtc cccgcgcggg attgtccgcg gcgtggtctt cgcaattctg attgtcggct
     2941 tgatcgtcgc cggcggccag ggcggcgccg gtcattcggt gggccacttt ccttcctact
     3001 atccccatga aattcgcatc gaaaccatcg aacccgcagc agccgccaag ggcttaagcg
     3061 aagaaaccct gcacgcttat gtcggcgccg tgcctacgtt cgccgggccg ataccccggc
     3121 acatcgagtc ggtgcgatcg ctgggatcga ttttcgttct ctcattcagg acgacctcca
     3181 cgcagttcgc gacggctgac gcccgctgta ctgctgcgcg cggtgtcatg gcggtgctgc
     3241 gcgatgagaa ggaagggggc ttcatctttc acccctatcc cgtgacgccg tatcacgccg
     3301 actacctgca ccatctggac cgggtggagg cggcaatgaa cgccgtcggc gggacgtccg
     3361 cgccggcgtc cgagaagttc ggcgccaagg gccgactcgc gacggcaatc gtacgcgcac
     3421 ggtggcaact tgcgactgag gacgcggacg cggtcctcga ggaaataccc gccgtcgagc
     3481 tgctcgcaag catgagcttg tcgtttgacg gctggtcggg accgccctgg gcaaaggaag
     3541 gctggttcga ggcgcatcgt ttgctggcgc cgtcgctgga cggcgcagca cgggaagcga
     3601 tggatgacga ctatgcgcgc ctggtgcatg gcgaaacgct cggcctcgca gaacgagcgg
     3661 acctggagcg acgcctggta gccacgctca cgcgtggctg tgcacgcttg gtcgtgggtt
     3721 acacgccaaa ggaggaattc gtcgatgccg cctatccggc aggaatcgag aacgtcgctt
     3781 acgattcgct gagcgggctc aacagtccca tttttctgcg cacggtaaaa ctcaaggaat
     3841 acccgtggaa cggcaatctg catcttggtg tgcgcgaacg ttccacgggc gcctggaacc
     3901 cggtggccgg ctttagcgat acgatgggac ggttgatctg gtcggccatc ggcgatcccg
     3961 cgatgatcca gtttccattc aacgccagct ggatgcacaa ccgcgtgcaa tcggtcatca
     4021 ccaaggtgga gggccaatcc ggcggcatcc gcgtgccgcc agatgcgcgt cgaccgcagc
     4081 cgggaacggg tacacttgat cctgtgggcg ccaacacatt cgcctctgcg aaagttgtct
     4141 acgaggtact tacctccccg ttcgaggacg ggtccgaaat ggacgcggcc gacgtggtct
     4201 atccgttcat gttcacctat cgctggggag caaaagcgaa ctccggcggc gacaaccacg
     4261 aaccacgact ggagcagacg ctgaccgcaa tgcaggagca cgtggccgga cttaaggttg
     4321 tgcgcgtgga gcggacaaag cacgttatcg cggagaactg ggaaattttt acgaacaccc
     4381 cagtggtcga ggtttatctt cgaggtgtac cgcacgacga gctacaggtc gctgcgatgg
     4441 cgccgccgtg gagcacgata ccctggcatc tgctggcgtt gatggaagaa gcagtgaaac
     4501 gtgactatgc ggctttttcc aagaaagagt ccgagcgacg gcgcatcccc tggatggacc
     4561 tggttcgcga tcaagatttg cgggctaaac tcttgccttt gattgcgaag ttcgagcgcg
     4621 aaagttatcg ccctgaacca ttaagagaat tcgtgaccgc cgaggcggcg
//
LOCUS       DATDHO010000899         3271 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_43160, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000899 DATDHO010000000
VERSION     DATDHO010000899.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43160"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..591
                     /locus_tag="VIY07_17735"
     CDS             <1..591
                     /locus_tag="VIY07_17735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HEY6383632.1"
                     /translation="ELAFFPLIYWPISPGAPKPSQAALEKIDSYMKRGGTVIFDTRDA
                     VDAPPGPGGEMRGPGMVALRAILSSLDIPELEPVPHDHVLTKTFFLLRDFPGRFTNGQ
                     LWVEALPAGTEDEEPNRPARAGDGVSSILITSNDLAGAWAMRQDGQPMLPMVPGEPRQ
                     REFAFRAGVNIVMYALTGNYKADQVHIPALLERLGQ"
     gene            601..2667
                     /locus_tag="VIY07_17740"
     CDS             601..2667
                     /locus_tag="VIY07_17740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383633.1"
                     /translation="MNLGVSFAPLVPAYAVWAAFAAAVLISLVLLIARSRGAPLRALA
                     LGLMVLALANPSLTREDRDPIPSVAAVIVDKSPSQNFGDRSQQTEAARTALVERLKRI
                     PGLEVRVAEAGAADGETDGTKLFSALSSTLADVPPDRVAGAVLITDGRVHDVPADAST
                     LGFSAPLHALITGQKDEIDRRVVLTRTPRFGIVGQSQTIGFRIEDQGARIGAAEVTVR
                     RDGEVLEKRVVTVHTDINFNVPIPHAGPNIVEIEASPLERELTQINNRAVISIDGVRD
                     KLRVLLVSGEPHAGERTWRNLLKSDASVDLVHFTILRPPEKQDGTPINELSLIAFPTR
                     ELFQQKIAEFQLIIFDRYARQGVLPLIYFDNIAKYVRDGGAVLIAAGPDYASPTSIWR
                     TPLDGILPAEPTGEITERSFYARLTEAGQRHPVTRKLEGSDTDPPHWSQWFRLVDIKR
                     STGTNVMQGPDGKPLLVLAREGEGRVALLLSDHIWLWARGYEGGGPHLDLLRRLSHWL
                     MKQPDLEEEALRLIVHGRDITVQRQTMADSVNRVTLTSPSGETRPIELQQVEPGLWRA
                     ATTANELGLWRATDGKLTALTNVGPANPREFIEVTSTTDVLDALSSATGGDARRVAEG
                     DRINVPRIVPVRTSTTFKGDDWIGLKMRDASVVRGIGVLPIFAGLIGLLLLIGSLAAT
                     WAREGR"
     gene            complement(2701..3213)
                     /locus_tag="VIY07_17745"
     CDS             complement(2701..3213)
                     /locus_tag="VIY07_17745"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007595102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEY6383634.1"
                     /translation="MSELALTIMPETAADAVAIERLHERTFGPGRFARTAFRIREGRG
                     HVLELSFTARIGTLMVGSVRLTPICIGDTPALLLGPLTVEPPFRSHGVGTALVKRAIA
                     EAKVNGHKLVVLVGDEPVYAKSGFKRIPKGQVKMPGPVDPARLLIAELASGAFDGVSG
                     MIRPDWELSK"
BASE COUNT          598 a         1069 c         1023 g          581 t
ORIGIN      
        1 gagcttgcct ttttccccct gatttattgg cctatctcgc caggcgcgcc gaagccgtcg
       61 caggccgcac tggaaaaaat cgacagctac atgaagcgag ggggcactgt aattttcgat
      121 acccgcgatg ctgtagacgc gccgccgggc cctggcggcg aaatgcgcgg tcccggcatg
      181 gttgcgttgc gagcgatcct gtcctcgctg gatattcccg aactcgaacc ggtcccgcac
      241 gaccacgtgc tgaccaaaac attctttctg ctgcgcgact ttcccgggcg gttcacgaat
      301 ggccagctct gggtcgaggc actgcctgca ggtaccgagg atgaagagcc caaccggccg
      361 gcacgcgcgg gcgacggcgt atcctcgatc ctgatcacct cgaacgatct cgccggagca
      421 tgggccatgc gccaggatgg ccagccaatg cttccaatgg ttccgggcga accgcgccag
      481 cgcgagttcg cgttccgcgc cggcgtcaac atcgtcatgt atgcgctgac cggcaactac
      541 aaggccgatc aggtgcatat ccccgcgcta ctcgagcggc tcggacaata ggagcatgcg
      601 gtgaatctcg gtgtttcatt tgctcctctg gtgcccgctt acgcggtgtg ggctgcattc
      661 gccgcggccg ttttgatttc tttggtgctc ctcattgcgc gaagccgcgg cgcgccgctg
      721 cgcgcgctcg cgctgggcct gatggtgctt gcgctggcaa atccttctct cacccgcgaa
      781 gaccgcgacc cgataccgtc ggtagccgcc gtcatcgtcg acaagagccc gagccagaat
      841 ttcggcgatc gctcccagca gacggaggct gcgcgcacgg ccctcgtcga gcggctcaag
      901 cgcattccgg gactcgaggt ccgcgttgcc gaagctggcg ccgccgacgg cgagaccgac
      961 ggcaccaagt tgttctccgc gctgtcgtcg acgctcgccg atgtgccgcc cgatcgcgtc
     1021 gcgggcgccg tcctgatcac cgatggccgc gttcatgacg tgcccgctga cgcttccacg
     1081 ctgggttttt ccgcgcccct gcatgcgctg attaccggcc agaaggatga aatcgatcgc
     1141 cgggtcgtac ttacgcgcac gccgcgcttc ggcatcgtcg gccaatcgca aaccatcggc
     1201 ttccgcatcg aggatcaggg cgccaggatc ggcgccgcgg aagtcacagt acgacgcgat
     1261 ggcgaagttc tcgaaaagcg cgtggtcacg gtgcacaccg acatcaactt caatgtgccg
     1321 atcccgcacg cgggaccgaa catcgttgag atagaggcgt ctccgcttga gcgcgaactt
     1381 acgcagatca acaaccgcgc agtcatctcg attgacggcg tgcgcgacaa actgcgtgtg
     1441 ctgcttgtct ccggcgagcc gcatgccggc gagcgcacct ggcggaattt gctcaagtcg
     1501 gacgcctcgg ttgatctggt gcatttcacg atccttcggc cgccggaaaa gcaggacggc
     1561 acgccgatca atgagctgtc gctgattgca ttcccgacgc gcgagctttt ccagcagaag
     1621 atcgcggaat tccagctgat catatttgat cgctacgcgc ggcagggcgt attgccgctc
     1681 atctatttcg acaacattgc aaaatatgtc cgcgatggcg gcgcggtgtt gatcgccgcg
     1741 ggcccagact atgcgagccc gacaagcatc tggcggacgc cgcttgatgg catcctgccc
     1801 gccgagccga ccggtgagat caccgagcgc agcttctacg cacggcttac cgaagccggc
     1861 cagcggcacc ccgtgacgcg caagctggaa ggctccgaca ccgacccacc gcactggagc
     1921 cagtggttcc ggctggtgga tatcaaacgc agcaccggca ccaacgtgat gcagggcccg
     1981 gacggcaagc cgctcctcgt gctggcgcgc gagggcgaag ggcgcgtggc gctgttattg
     2041 tcggatcaca tctggctttg ggcgcgcgga tatgagggtg gcggaccgca tctcgatctc
     2101 ctgcgccggc tgtcgcactg gctgatgaag cagccggacc tggaggaaga agcattgcgg
     2161 ctgattgttc acggccgcga catcacggta cagcgtcaga cgatggccga cagcgtcaat
     2221 cgggtaacgc tcacctcgcc gagcggcgaa acccgtccga ttgagctgca acaggtcgag
     2281 ccggggctat ggcgcgcggc gacgacggcc aacgagctgg gtctctggcg cgcaaccgat
     2341 ggcaagctta cggccctgac aaacgtaggt ccggccaatc cgcgcgagtt catcgaggtg
     2401 acctcgacga cagacgtctt ggatgcatta agcagtgcga cgggtggaga cgcccggcgg
     2461 gtcgcggaag gcgatcgcat caacgtcccg cgcatagtgc ccgtgcgcac cagcacgacc
     2521 ttcaaggggg acgactggat cggcctgaag atgcgggacg ccagcgttgt gcgcggcatc
     2581 ggcgtcctcc cgatcttcgc cggacttatc ggactgttgt tgctgattgg gtctctcgcc
     2641 gcgacctggg caagagaggg acgctagcac gtactccatt cattcccgcg caagcgggaa
     2701 tcatttgctg agttcccaat ccgggcggat cattccggac acgccgtcga aggcacccga
     2761 cgcaagttcg gcgatcagca ggcgggccgg gtcgaccgga ccgggcatct tcacctgacc
     2821 cttcggaatg cgcttgaagc ctgatttcgc gtaaaccggt tcgtcaccga ccagaacaac
     2881 gagcttgtga ccgttgacct tggcctcggc aatggcacgc ttgaccagcg ccgtgccgac
     2941 accgtgcgaa cggaacggtg gctcgaccgt cagcggaccc agcagaagcg ccggcgtgtc
     3001 gccgatgcaa atcggtgtca gccgcacgga tcccaccatc agcgtgccga tgcgcgcggt
     3061 aaacgacaat tccagaacgt gacctctacc ctcgcggata cggaatgccg tgcgcgcaaa
     3121 acgccccggt ccgaacgtgc gctcatgcag gcgctcgatc gcaaccgcat cggcggcggt
     3181 ctccggcatg atggtcagcg ccaactcgct cattgcgttc cccagcaccc aaaccgtcat
     3241 gcccggcact cgggtccggc cttcggccgg c
//
LOCUS       DATDHO010000900         2562 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_43308, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000900 DATDHO010000000
VERSION     DATDHO010000900.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43308"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /locus_tag="VIY07_17750"
     CDS             complement(<1..424)
                     /locus_tag="VIY07_17750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing phosphodiesterase"
                     /protein_id="HEY6383635.1"
                     /translation="MRRLTAVAFAVATSLLASQIACAVEAINVRLDAAAIDLTAATEV
                     QKTDGDRIQVSTAPGPDGIVRRIEVRAREGNNNWAVFALTNNSDEQIDRLIVVPHYRM
                     VASGLFWPDLGLSRIAAITPSTGDRPVRQESSTADIFRI"
     gene            complement(577..1572)
                     /locus_tag="VIY07_17755"
     CDS             complement(577..1572)
                     /locus_tag="VIY07_17755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HEY6383636.1"
                     /translation="MAALPSTMTAIGIKAAGGPDMLVGQERPMPVPGDGEILVKVAAA
                     GVNRPDVMQRMGLYPPPPGAPDIPGLEIAGEVVALGPNVRRWKIGDRLMALVVGGGYA
                     EYCVAHEGHALPVSGLSMIEAAAVPETFFTVWHNAFERGGLKSGETLLIHGGSSGIGT
                     TAIQLAKSFGARVITTAGSEEKCAACRKLGADVAINYRTEDFVAATKAATGDKGAEVI
                     VDMVGGDYIARNYEAAAVEGRIVQIAFQGSPKANVDFRRIMLKRLHHTGSTLRARSVA
                     DKAAIARAVEENVLPLMVAGKVKPVIYKTFPLNAAAAAHELMETSAHIGKIVLTT"
     gene            1675..1869
                     /locus_tag="VIY07_17760"
     CDS             1675..1869
                     /locus_tag="VIY07_17760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1192 domain-containing protein"
                     /protein_id="HEY6383637.1"
                     /translation="MPAVDEDDKPKKKVTHEIGQDLTLLSVEELGARVQLLHDEIKRI
                     EADISQKRASRAAADQFFKR"
     gene            2227..>2562
                     /locus_tag="VIY07_17765"
     CDS             2227..>2562
                     /locus_tag="VIY07_17765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1465 family protein"
                     /protein_id="HEY6383638.1"
                     /translation="MSEKPLSETQPVSFGERLASSQVFTDLFRDGMALVEETATYLDG
                     PGRQQSKKLERAAALAYATESMRLTTRLMQLASWLLLHRAVKEGEMSLAQASKEKTKV
                     KLASTDGHDP"
BASE COUNT          518 a          738 c          745 g          561 t
ORIGIN      
        1 tgatgcggaa aatgtcggcc gtcgaacttt cctggcggac agggcggtcg ccggtcgagg
       61 gcgtaattgc tgcgatacgt gaaagaccga ggtctggcca aaacaggcct gatgcgacca
      121 tacgataatg cggaacgaca atgaggcgat cgatttgctc gtcgctgtta ttggtgagcg
      181 caaacaccgc ccaattgttg ttgccttcgc gggcgcgtac ttcgatccgc cggacgatgc
      241 catcgggtcc gggcgcggtt gacacctgga tgcgatcgcc atcggtcttt tgcacttctg
      301 ttgcagccgt cagatcgatt gcggcggcat cgagccgcac gtttatcgct tccactgcac
      361 atgcaatctg agacgccagc agcgaagtgg cgacggcaaa cgccacagct gtcaggcggc
      421 gcatcatgac caaaatgaaa tccccgcccg cggcatcgcc ttgcagcctg gggccctggc
      481 cttgccgacg gttcgaatcc tcaaacaatt gcaccctgtt cagtttaaat ccgacattat
      541 gccgatttcg cggcttttcc ggaaatgggc gtccgatcaa gttgttagca cgattttgcc
      601 gatatgggcg ctggtttcca tcaactcgtg cgcggcggcc gccgcgttga gcgggaatgt
      661 cttgtagatg accggtttca cctttccggc aaccatcaga ggcaaaacgt tctcctcaac
      721 cgcccgggcg attgcagctt tatcggccac cgagcgcgcg cgcagggttg agccggtgtg
      781 gtgcaatcgc tttagcatga tgcggcgaaa atcgacgttg gctttcgggc tgccctgaaa
      841 tgcgatctgg acgatgcgcc cctctactgc cgcggcttca taattgcgcg cgatataatc
      901 tccacccacc atgtcgacta tgacctcggc gcccttgtcg ccggtggcgg ccttcgtggc
      961 cgcaacgaag tcctctgtcc tgtagttaat ggcgacgtcg gcgccgagtt tgcggcatgc
     1021 cgcgcacttt tcttccgaac ccgcggtcgt gatcacgcgt gcgccgaatg atttcgcaag
     1081 ctggatggcg gtggtgccaa tgccggacga gccgccgtgg atgagcaatg tctcgccgct
     1141 tttcagaccg ccgcgctcga atgcattgtg ccagactgtg aaaaaagttt cggggacggc
     1201 cgccgcttca atcatcgaca agccggaaac cggcaaagcg tggccttcgt gagcaacaca
     1261 gtattcggcg tatccgccgc cgaccaccag cgccatcaag cgatcgccga tcttccagcg
     1321 cctgacattc ggaccgagag cgacgacttc gccggcaatc tcaagtccgg gaatgtccgg
     1381 cgcaccgggc ggtggcggat aaagacccat gcgctgcatc acatcgggac ggttcacacc
     1441 ggcagctgca actttcacca gaatttcgcc gtcaccagga accggcatcg ggcgctcttg
     1501 gcccacgagc atatccgggc cgccagctgc cttgatgccg atcgcagtca tggtgcttgg
     1561 aagtgccgcc atcaggtgtc ctctctttgc aatttggtcg tcttgtttag gcgggccatg
     1621 gcgatgtgac aaccatcgcc actgtggcta gatttccgct gcaggaggcc atccatgcca
     1681 gcggtcgatg aggacgataa gcccaagaaa aaagtaacgc acgaaattgg acaggatctg
     1741 actttgctgt cggtcgaaga actcggtgcg cgcgtacaac tgctgcatga cgagattaaa
     1801 cgtattgagg ccgacatttc gcaaaagcgc gcttcgcgcg cggccgccga tcagtttttc
     1861 aaacgctgac gcaagacgcg cgagtgcttg cgggaggagg tatcaacgtg ctgaagcgcg
     1921 taaaaaatat ttgtattgcg cctatgtttt taaggtgtcg ttaagctttc tcgaccatta
     1981 ctggcattgt ccatcttcat gtggacattg agtggctcct gtccactctg tttgacgcct
     2041 ccctgttatc accttgagcc gccggtaacg gcggctcttt tttgtctcaa tatgggtcac
     2101 atgcgcggca actatattgc catgttaacc atagcaccga ctggacagag gtcgtgtaag
     2161 cgcgtcatgc ttacccaatc gtatacggag cgtgtatctg cctccgggtg agtaagggcg
     2221 tgcgttatgt ccgagaagcc tttgagcgaa acgcaaccgg tatcgtttgg tgagcggctc
     2281 gcgagttccc aggtttttac cgatttgttt cgtgacggca tggcgctggt cgaggaaacg
     2341 gcaacttatc ttgacggtcc tggccggcag caatccaaga aactcgagcg tgccgccgct
     2401 ctggcctacg ccactgaaag catgcggctg acaacgaggc tgatgcagct cgcttcctgg
     2461 ctgctgcttc atcgcgccgt gaaagaaggc gagatgtcgc ttgcgcaggc cagcaaggaa
     2521 aagacaaagg tcaagcttgc gtccacggac ggccacgatc cc
//
LOCUS       DATDHO010000901         1746 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_391901, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000901 DATDHO010000000
VERSION     DATDHO010000901.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_391901"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            98..1264
                     /locus_tag="VIY07_17770"
     CDS             98..1264
                     /locus_tag="VIY07_17770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3095 domain-containing protein"
                     /protein_id="HEY6383639.1"
                     /translation="MDSSESTIDFYKHLPVFRNFTQVADDACFRPLPADWIVGLADVQ
                     QSTQAIRENRYKAVNMAGAAVIASVANALQNRDFPFVFGGDGASFAVPAADAALARKA
                     LAETATWVKEDLDLILRIGIVSVADIRTQGRDVRVARYAPSDNISIAMFSGGGLAWAD
                     AAMKRGEIAIAPAPPGSHPDLSGLSCRFELIPSRRGEVLSLVVTPAPQARPDDFLRVV
                     EGVTRIVEKTPDASRPVTGEDLRIKWPPQGYDLEARASRRAGESIGARKAKVLATTFL
                     YFLIMKFGLRVGKFTPARYTKQVVENSDFRKFDDSLRMVLDCTPQLAAEIESFLKDAA
                     SRGVIRYGTHSQDHAMMTCFTPSPANPSHVHFIDGAQGGYALAAAALKQSAGSE"
     gene            complement(1268..>1746)
                     /locus_tag="VIY07_17775"
     CDS             complement(1268..>1746)
                     /locus_tag="VIY07_17775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014889676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEY6383640.1"
                     /translation="LAMAAGIATLEVIQSEGLMENAERTGVRLLATFERMIGRHELVK
                     DVRGKGLMIGIEFGAPRSLKLKASWNLLETANSGLFCQLIVIPLLKEHRILTQVAGHG
                     NHTIKLLPPLTISDQDCDWIERSFETVISEAHRVPGAIWSLGKTLVENAARARARG"
BASE COUNT          323 a          559 c          511 g          353 t
ORIGIN      
        1 gccaaatatt ccatgattgt ggcgggtatg cgggcagcaa cgccttcttc agtctggccg
       61 cacgcacctc atgccgtgat cggctactat cgtttcaatg gactcatccg aaagcacgat
      121 tgatttctac aagcatctgc cggtcttccg gaatttcacc caggttgcgg atgacgcgtg
      181 ctttcggccc cttcccgcgg actggattgt cggcctcgcc gacgtgcagc agtcgacaca
      241 agcgattcgc gaaaatcgct acaaagccgt gaacatggca ggcgccgccg tcatcgcttc
      301 ggtggccaat gcgctgcaga accgcgattt tccttttgtg tttggcggcg acggggcaag
      361 ctttgccgtc cctgccgccg atgcggccct ggcacgtaag gcgctcgccg agactgcgac
      421 ctgggtcaag gaagatctcg atctcatcct gcggatcggc atcgtttcag tggccgacat
      481 tcgcacgcag ggccgcgacg ttcgtgtcgc ccgttacgcg ccttcggaca acatcagcat
      541 cgcaatgttt tcgggcggcg gtctcgcctg ggccgacgcc gcgatgaaac gcggcgagat
      601 tgcgatagct cccgctccac ccggatcgca tcccgactta tcgggcctgt cctgccgatt
      661 tgaattgatc ccgtcgcggc gcggcgaggt gctttcgctt gtcgtgacgc ccgcaccgca
      721 ggctcgtccc gatgactttc tccgcgtcgt cgagggggtg acccggatcg tcgagaaaac
      781 gcccgatgcg tcacgccccg ttaccggcga ggacctgcgg atcaaatggc ctccacaagg
      841 atacgatctc gaggcccgcg catcccggcg cgccggtgaa tcgatcggcg cgcgcaaggc
      901 caaggttctg gccacgacct ttctctactt tctcatcatg aagttcggtc tgcgcgtcgg
      961 aaaattcact ccggcgaggt ataccaaaca ggtcgtcgag aattcggact tccgaaagtt
     1021 cgacgattcg ctgcgcatgg tgctcgactg cacgccgcag ctggcagccg agatcgaaag
     1081 ctttctgaag gacgcggcca gcaggggcgt aatccgatac ggcacgcaca gccaggatca
     1141 cgcgatgatg acctgcttca cgccgtcgcc cgcaaacccc agtcacgttc acttcatcga
     1201 cggggcacaa ggcggctacg cgctggctgc cgccgcgctg aagcagagtg cgggaagcga
     1261 ataaggatca gcctctcgct cgcgcgcgcg cggcattctc gaccagggtt tttcccagcg
     1321 accagatcgc gcccggaacg cggtgtgcct cggatatgac cgtctcaaag gatcgctcga
     1381 tccagtcgca gtcctggtca gaaatggtca gcggcggcag gagcttgatg gtgtgatttc
     1441 catgacccgc aacctgtgtg aggatccggt gctccttcaa cagcggaatg acgatcaatt
     1501 ggcagaatag tccgctgttc gccgtctcaa gcagattcca cgacgccttc agcttgagcg
     1561 agcggggcgc gccgaactcg atgccgatca tcagcccctt gccgcgcacg tccttgacca
     1621 gttcgtgacg tcctatcatt cgctcgaacg tcgcgagcag gcgcacgccc gtgcgttctg
     1681 cattctccat taatccttcg gattggatca cctcgagagt ggctatcccg gccgccatcg
     1741 ccagat
//
LOCUS       DATDHO010000902         4321 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_144704, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000902 DATDHO010000000
VERSION     DATDHO010000902.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4321
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144704"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..455
                     /locus_tag="VIY07_17780"
     CDS             <1..455
                     /locus_tag="VIY07_17780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383641.1"
                     /translation="VYTRFFLATLRDFFFVLAFLFGAVRFVAATLLAIFFAGAVVVAP
                     LPASALAPLAALACIDVATVPKTALAAAVEAAFAVAPAVAAALATSPASTLVLSAALL
                     PAANTVSRAFVMVPLLFIFDLGRHRWFMDRYFSAQVCRFSNIAVDHCR"
     gene            646..1671
                     /gene="dusA"
                     /locus_tag="VIY07_17785"
     CDS             646..1671
                     /gene="dusA"
                     /locus_tag="VIY07_17785"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HEY6383642.1"
                     /translation="MTEKQQKSSEMPSRRFCVAPMMEWTDRHCRFFHRLLTRRAWIYT
                     EMLTTGAVLHGDRTRLLAFDPFEHPVALQLGGSDPRALAQSARIVEDFGYDEINLNVG
                     CPSDRVQEGRFGACLMAEPTLVGDCVAAMKAAVKIPVTVKCRIGIDDQNPDEALFDFA
                     EAMEAVGVDALIVHARKAWLKGLSPRENREVPPLDYGLVHRLKAAHPHLEIILNGGLA
                     SLDQAHAQLGHLNGVMMGRAAYQEPWRLLEVDPRVFGVAAPFGSPKDAALAFIPYIQR
                     ELAKGVRLHSITRHVLGLFHAIPGARAFRRHLSTQAVRPGAGPAVMADALALVLDREA
                     DLAHIAA"
     gene            1704..2537
                     /locus_tag="VIY07_17790"
     CDS             1704..2537
                     /locus_tag="VIY07_17790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEY6383643.1"
                     /translation="MLQGYPIGEIVLLALWIAGAGILVGILAGLFGIGGGAIIVPVLY
                     EVFRVLDVPEAVRMQACIGTSLAIIVPTTVRSYIEHKKKGAVIPDIVRIWALPAVIGV
                     ATGSVIAHYAPAQLFKIVFVAFASFIAIRMLIGTTRGNVAGELPAGPMLTFYGFLTGL
                     VASLVGVSGGSVSNAVLTFYGRPMQQAVATSAGVGVPITIAGSLGYMLAGWPYTAQMP
                     PLSLGFVSLIGFALMAPVSSYTASYGVQLAHWLPRRKLEIAFAVFLFLVSLRFLLSMM
                     S"
     gene            complement(2543..3244)
                     /locus_tag="VIY07_17795"
     CDS             complement(2543..3244)
                     /locus_tag="VIY07_17795"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02281 family clan AA aspartic protease"
                     /protein_id="HEY6383644.1"
                     /translation="MSRRLVWSLLFGVALSLAALIASRDQDAITNLLRHDIGSLALKV
                     VLVVFAGAVVLALLRERLSKAIEATFFWAVIGLLLVAGYSYRFELRDVADRVIAELIP
                     GHVAGHGRNVEVVRGHAGDFAVAAHVNGTRIPMVLDTGASSVVLTQAAAKAAGLPIEV
                     LNYTVNIDTANGRTRAAAVTLDRVAIGGLTERSVPALVAQPGQLKNNLLGMSFLNRLQ
                     SWEVRGDRLRMRGMP"
     gene            complement(3249..3443)
                     /locus_tag="VIY07_17800"
     CDS             complement(3249..3443)
                     /locus_tag="VIY07_17800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006697635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HEY6383645.1"
                     /translation="MIETPCVKICTLDARMGLCLGCGRTIDEIARWTGMTASERAQVM
                     LELPERLATCTSAKMPSEMG"
     gene            complement(3525..4321)
                     /locus_tag="VIY07_17805"
                     /pseudo
     CDS             complement(3525..4321)
                     /locus_tag="VIY07_17805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608748.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
BASE COUNT          860 a         1204 c         1270 g          987 t
ORIGIN      
        1 gcgtttatac tcgtttcttt ttagcaacct tgcgggactt tttctttgtg ttggccttcc
       61 tctttggtgc ggtgcgtttt gtagcagcca cccttttggc gatcttcttt gcaggagcag
      121 tcgtagtggc ccctttgcca gcaagcgcat tggctccttt agcggccctt gcctgtattg
      181 acgttgcaac cgtccccaag accgcgctgg ccgcagccgt agaagcggcc tttgccgtag
      241 cgccggccgt agcagcagca ttggcaactt cgccagcaag cactttggtt ctttcagcgg
      301 cgcttctccc tgccgctaac acagtttccc gcgcctttgt tatggtgccc ttgctcttca
      361 ttttcgatct cggtcgccac aggtggttta tggacagata ttttagtgcg caggtttgca
      421 gattcagcaa tatagcggtc gatcactgcc gctgaggtca ggtcttcctt gtgttctaac
      481 tcgccgggct tctttctggg cggtaaatgc ttggagccgt ctttgcgagt ccgtccaatt
      541 atcgtgcgca tggtacgacg ttttccaaaa agtacgactt tgtcgtgccg cggacggtaa
      601 aatggggcaa aatgcgtccg cgggtatgtg aacaaaagag ccgaagtgac tgaaaaacag
      661 caaaaatcgt cagaaatgcc gtcccggcgc ttttgtgttg ctccgatgat ggaatggacc
      721 gacaggcatt gccggttttt ccatcggctg ctgacgcgcc gggcatggat ctacactgaa
      781 atgctgacaa ccggcgcagt cttgcatggc gatcgtactc ggttgcttgc gtttgacccg
      841 ttcgagcatc cggtggcgct tcagctcggt ggaagtgatc ctcgtgcact ggcgcaatcg
      901 gcgcggatcg tcgaggattt tggctacgac gaaatcaatc tgaatgttgg gtgcccgtcc
      961 gaccgggtgc aggaaggccg tttcggcgca tgtttgatgg cggaaccgac gctggtcggc
     1021 gattgcgttg cagccatgaa ggctgccgtc aaaattccgg ttaccgtcaa gtgccgcatt
     1081 ggaattgatg atcagaaccc ggacgaggcc ctgtttgact tcgccgaagc gatggaggcc
     1141 gttggggtcg atgcactgat cgtgcatgcc cgcaaggcct ggctgaaagg attgtcgccg
     1201 cgagaaaacc gcgaggtgcc gccgctcgac tatgggctcg tccatcgatt aaaggcggcg
     1261 catccgcacc ttgaaatcat cttgaatggc ggcctcgcca gcctggatca ggcacacgct
     1321 caacttggcc acttgaatgg ggtcatgatg gggagagcag cttatcagga gccttggcgg
     1381 ctgctcgagg ttgatccgcg ggtattcgga gtagcggcac catttgggtc gccaaaagac
     1441 gctgccctgg cgtttattcc atatatccag cgtgaactgg cgaaaggcgt gcgcctgcac
     1501 tcgataacgc gtcatgtact cggactcttc catgcaattc caggtgcgcg cgctttccgc
     1561 cgccatctgt ccacccaggc tgtaaggccg ggggcgggcc cagcggtcat ggctgatgcg
     1621 ctcgcactgg tgctggacag agaagccgat ttggcgcaca tcgcggccta gtacttcccc
     1681 ccgcttatct ttctcgggtc atcatgctgc agggatatcc gatcggcgag atcgttttgc
     1741 tcgcgctttg gatcgcagga gccggcattc tggtcggcat actcgcgggg cttttcggga
     1801 ttgggggcgg tgccatcatt gtgcctgtgc tgtatgaagt ttttcgcgtg ctggacgtgc
     1861 ccgaagcggt acgcatgcag gcgtgtatcg gcacatccct ggcgatcatc gtcccgacca
     1921 cagtccgttc ctatatcgag cacaagaaaa aaggcgcagt gatcccggac atcgttcgca
     1981 tctgggcgtt gccggcggtg atcggggtcg cgacaggttc ggtgatcgcg cactacgcgc
     2041 cggcgcagct tttcaaaatc gtgtttgtgg cgttcgcaag cttcattgca attcgaatgt
     2101 tgatcggcac gacgcgcggc aacgttgccg gcgaattgcc tgcaggcccc atgctcacgt
     2161 tttatggttt tctgaccgga cttgttgctt cactggtcgg cgtaagtggt gggtcggttt
     2221 ctaacgcggt tctgacgttc tatggacggc cgatgcagca ggcggtcgca acctctgcag
     2281 gagtcggcgt gccgataact atcgcgggat cactaggtta catgctggcg ggttggccat
     2341 ataccgcgca aatgccgcca ttgtctcttg ggttcgtatc gctgatcggc tttgcgttga
     2401 tggccccggt atcgagctat acggcaagtt acggcgttca gctcgcccac tggctgccgc
     2461 ggcgcaagct tgagattgcg ttcgcagttt ttctgttctt ggtctcgttg cgatttttgt
     2521 tgagcatgat gtcctgatga aatcagggca ttccgcgcat gcgcagccta tcgccgcgca
     2581 cctcccaact ttgcagtcgg ttaagaaagc tcatgccgag gaggttgttc ttcagctggc
     2641 ctggttgtgc cactaacgcg ggtaccgatc gttctgtcag tccgccgatt gcaacccggt
     2701 caagggtgac agccgctgcg cgcgtgcggc cgtttgcagt atcaatattg accgtatagt
     2761 tgagcacctc gattggaagt ccggcagcct tggcggctgc ctgcgtcagt acgacggaac
     2821 tcgcgccggt atcgaggacc atcggaatcc gcgtgccatt cacatgtgcg gcaaccgcga
     2881 agtcaccagc atgacctcgc accacttcga cgttccgccc gtgtcctgcc acgtgaccgg
     2941 gtatcaactc ggcgatcacg cgatctgcaa cgtcgcggag ctcaaagcgg tagctgtaac
     3001 cagctacaag cagcaagcca atcactgccc aaaaaaaagt cgcctcgatc gctttcgaaa
     3061 gccgttcgcg aagcagggcc agcacaacgg cgccggcaaa aaccacgagg acgaccttga
     3121 gcgcaagcga accgatatcg tgccgcaata aattcgtgat ggcatcctga tcgcggcttg
     3181 cgatgagggc cgcaagcgaa agcgctacgc caaacaaaag ggaccagacg agacggcggc
     3241 tcacagcatc atcccatttc cgagggcatc ttggcggaag tgcaggtagc gagacgctcg
     3301 ggcaattcga gcatcacttg tgcgcgttcg gaggcagtca tgcccgtcca gcgcgcgatt
     3361 tcgtcgattg tacggccgca gccaagacac aggcccatac gcgcatcgag agtgcaaatt
     3421 ttgacacaag gggtttcgat catgtgtatc tgagatccga ccggggcgac cataagcacg
     3481 tcggctggga aggcaattgc gcgattgtcg caaggttgga agacttagga gccagcacga
     3541 aacagccgcc ggcgcttgaa gcggcgctct tcctccggtc cgggttcctg ttcactgtct
     3601 gaaacaatcg acggcgcgtg ttcaggcagc ggtgccatgg ccgccaccac cctttctggc
     3661 ggaaaggtga caacgacctc cgtgccgatc ctgagctttg atttcaaagt gaaggtcccg
     3721 ccatgaaggt ccactaggct ctttgcaata ggcagcccaa gcccggcccc ctgttctgcg
     3781 gattttatgg aattcgagcc ttgtccaaag gatgcgagga cgaccgaaat ttcctcctcc
     3841 ggaatgccgg caccagtgtc cttaacactg aagtactgac cacccgaagc ggtccacccg
     3901 gctttgagcc agatctcgcc gccttgtggg gtgaacttga tcgcatttga cagcaggttg
     3961 agacagatct gacggattgc acgttcgtca gcccataggc gtggcaaggc gggctcgaca
     4021 cctcatgtat aacagtgccg cggctgctgg cgcgcagctt cagaagatga tgacagtcct
     4081 ggacaataga gatgagagaa atagattcct ccttgagctc atagcgacca gcctcgatgc
     4141 gggacaaatc gagaatttcg ttgatcagac cgagcaaatg cacaccggag ttatgaatat
     4201 cggaagaata ttccctgtaa gccagaaccg catgcgcgcc gaaaatctca gtcttcatta
     4261 cctcggagaa accgagaata gcattaagcg gcgtgcgcaa ttcgtgactc atctgggcaa
     4321 g
//
LOCUS       DATDHO010000903         1544 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_91530, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000903 DATDHO010000000
VERSION     DATDHO010000903.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1544
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91530"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            6..1028
                     /locus_tag="VIY07_17810"
     CDS             6..1028
                     /locus_tag="VIY07_17810"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEY6383646.1"
                     /translation="MKAPTQSTSSARTSSREITFAQAINEALAEEMRRDPRVFIIGED
                     VAEAGTPFKVLTGLAKEFGTKRVIDSPISEAGIAGIGVGAAMTGMRPVVDIMFGDFIT
                     LTMDQLVNQAAKIHYMSGGKLKVPMVLRTTLGATRRSAAQHSQSLHAWLSHIPGLKVA
                     VPSTPYDAKGLLKGAIRDDNPVVFFEDKMMYQLKGTVPADEYILPLGVADVKRTGSDI
                     TLVATSSMVHVALAAADALQASGISAEVVDVRTTVPLDKQTIVESVKKTSRAIVVDEG
                     YERYGVTAEIASVIADGAFYYLDAPVKRMGAMDVPVPFSPVLEDQTVPTPEAVVAVAR
                     TLCGQL"
     gene            1158..>1544
                     /locus_tag="VIY07_17815"
     CDS             1158..>1544
                     /locus_tag="VIY07_17815"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEY6383647.1"
                     /translation="MGVDWEERVDLDRLRRERLTRIKSALKASDMGALLCFDMNNIRY
                     ITATHIGTWAMDKLVRFSLLPQDDEPIIWDFGSAARHHQIYCPWLAERSRAGISTLRG
                     ATHPSSGLADDVAKKIRLELDKRKLLD"
BASE COUNT          341 a          441 c          457 g          305 t
ORIGIN      
        1 gagacatgaa agcgccaacg caaagtacat cgtctgctcg tacatccagc cgggagatca
       61 ccttcgccca agccatcaac gaagcgttgg ccgaagagat gcgccgcgac ccgcgagtgt
      121 tcatcatcgg cgaggatgtc gccgaggcgg ggacgccgtt caaagtcctt acggggctgg
      181 cgaaagaatt cggcacgaaa agagtgatcg actcgccgat ctccgaggct ggcattgcag
      241 ggattggcgt tggcgcagcg atgaccggca tgcgtcctgt cgttgatatc atgttcggcg
      301 acttcattac cttgacgatg gaccagctgg ttaaccaggc ggcgaaaatc cattatatgt
      361 ccggcggtaa actaaaagtg ccgatggtct tgcggacaac cctaggggcc acgcgccgct
      421 ccgccgctca gcacagccag agcctgcacg cgtggctgag ccatattccc ggattgaaag
      481 ttgccgtacc ctccacaccg tatgatgcca aggggctact aaaaggcgcg attcgtgacg
      541 acaatccggt ggtctttttc gaagacaaga tgatgtacca gttgaagggg acggtaccag
      601 cggatgaata catcctcccc ctcggtgtcg ccgacgttaa gcggacaggg agcgacatta
      661 ccctcgtcgc aaccagcagc atggttcatg tggcgctcgc cgcggcagat gcgttgcaag
      721 cgagcggcat cagcgccgaa gtcgtcgatg taagaacgac agtgccgctt gataagcaaa
      781 cgattgtcga atcggtaaag aagaccagcc gcgcgatcgt cgtcgacgaa ggctacgagc
      841 gttacggtgt gacggcagag atcgcctccg tcatcgccga cggggccttc tattatctcg
      901 acgcaccggt aaagcgcatg ggcgccatgg acgtgcccgt gccattctct ccggtgcttg
      961 aggatcaaac tgtgccgacg ccggaagcgg tagtggcggt ggcgagaacg ctttgtggcc
     1021 aactgtgatt gcatgattat ccgtcgacgt ttcgtgcagc gaatgaaccc tcacccttcc
     1081 ctctccatca gggagagggt ggaagaaaag aaatcaggac atggaggttt cctatggcct
     1141 taaagacgtt tggtctaatg ggcgtcgatt gggaagagcg cgtcgatctg gaccgcctcc
     1201 ggcgtgaacg tctgacgcgc atcaaaagcg ctctcaaggc ctcggacatg ggcgcgcttc
     1261 tatgtttcga catgaacaac atccgctaca tcaccgccac ccacatcggc acctgggcca
     1321 tggacaaact ggtgcgtttt tcactcttgc cgcaggacga cgagccgatc atttgggatt
     1381 tcggctcagc ggcgcgtcac catcagatct attgtccgtg gcttgccgag cgctcgcggg
     1441 cgggcatctc caccctgcgc ggcgctaccc atccgtcttc cggcttggcc gacgacgtgg
     1501 caaagaagat tcgtttggaa ctagataagc gcaaactcct cgac
//
LOCUS       DATDHO010000904         1713 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_293972, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000904 DATDHO010000000
VERSION     DATDHO010000904.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_293972"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            301..1137
                     /gene="budA"
                     /locus_tag="VIY07_17820"
     CDS             301..1137
                     /gene="budA"
                     /locus_tag="VIY07_17820"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR01252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047605 - acetolactate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA];
                     GO_process: GO:0045151 - acetoin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HEY6383648.1"
                     /translation="MPPNHFLHVLINESLWRAICERRDTTGESTAEIVESALRDQLDL
                     DGDAAFQASTIGAVLDGVYHGDITVGELRERGDFGLGTFDELDGELVMLDGVVYRMDS
                     QCRAHVVADEVRSPFATLTRWVTKYSKDLEGPHHMGQFEKRAMELMPSLNYLYGIRTE
                     GHFRRIEVRSVVRQTRRSRLVEAARGQSTRVLENCSGTLVGFFTPAFLGHIGVPGFHL
                     HFITSALDAGGHVLGFDIERGRVELDEMPQLHLALPDSDDFRHAKLAVETAELEEAER
                     KR"
     gene            complement(1222..>1713)
                     /locus_tag="VIY07_17825"
     CDS             complement(1222..>1713)
                     /locus_tag="VIY07_17825"
                     /inference="COORDINATES: protein motif:HMM:NF012273.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HEY6383649.1"
                     /translation="EGHHDIATATLSMGTAFRFQYLEKGQEACDALINRIPDPIRRER
                     RRDVIYNGVEAREFKTAVRMWEALLTDMEKTLGGSRWLADDNYSLADAAYTPYLTRLD
                     HLNLLDLIAKRPRLTNWYERIRTRPSYDSAIRQWENHAYIDLMNTKGGEVWPRIKRMI
                     DEL"
BASE COUNT          321 a          482 c          522 g          388 t
ORIGIN      
        1 attattggac cagcatcatg accttcacag cgaattgggg ccgcaagccg gcgtgagtca
       61 agattgaaag ttgattgaat gtcgcgttca gtcccagcgc gtcacgcagc gtagaaacgg
      121 ctgttgggcc cgatcctgta atgattcagg ataaacagcc tgcgtcttcg gcgcaggtga
      181 cataggcgag gttcaggtct ggcgcatcag gaaccgccaa cccgctccag atggctttga
      241 aatgccatac gttggccgtt cgttgcttaa agatccggac gcaacatgct acgttgcctc
      301 atgccgccga atcacttcct tcacgtactt atcaacgaaa gcctctggcg tgcgatctgt
      361 gaacgccgcg acactaccgg cgagagcaca gcggagatcg tggaatcggc gcttcgcgat
      421 cagctcgacc tcgatgggga cgcggctttc caggcgtcaa cgatcggggc ggtactggac
      481 ggtgtgtacc atggcgacat cacggtcggc gaactgcggg aacgcggcga cttcggtttg
      541 ggcaccttcg acgagcttga tggggagctc gtgatgcttg acggggtggt ctatcgcatg
      601 gattcccagt gccgcgccca cgttgttgcc gatgaagttc gctcgccgtt tgcgacgctg
      661 acccggtggg taacgaaata ttccaaagac ttggaaggcc ctcaccacat ggggcagttc
      721 gagaaacggg caatggagct gatgccttcc ctcaactacc tgtacgggat tcgaaccgaa
      781 gggcacttcc gacggatcga ggtgcgaagc gtcgtgagac agacccggcg cagccggctc
      841 gtggaggccg caagaggcca gtccacccgc gtcctcgaga actgttctgg aaccttggtc
      901 gggtttttca cgcccgcgtt tctcggtcac atcggggttc caggattcca cctgcatttc
      961 attaccagcg cgctcgatgc cggggggcat gttctcggct tcgatatcga gcgcgggcgg
     1021 gtcgagctgg acgagatgcc acagctgcac ctcgccctgc ccgactccga cgacttccgt
     1081 cacgcaaaac tggccgtcga gacggcggag ctcgaagagg ccgaaaggaa gcgctgaggc
     1141 gccttcggtg gtggtgctgg cctgggggtc tttcctacta tttgcggaga gtgtcgggcc
     1201 ttcgtattgc cggggcttct tttacagctc gtcaatcatc cgtttgattc tcggccagac
     1261 ttcaccgccc ttggtgttca taagatcaat atacgcgtgg ttttcccatt gtctgattgc
     1321 gctgtcatag ctgggccgag tccgtattcg ttcgtaccag ttcgtgagtc gcgggcgttt
     1381 tgcgatcaag tcgaggaggt tcagatgatc gagtcgggtc aggtaaggcg tataagccgc
     1441 gtccgcgagc gaatagttgt catccgctag ccaacggctg ccgccgagtg ttttttccat
     1501 gtccgtaagc agcgcttccc acatgcgtac ggcggttttg aattctcggg cctctacgcc
     1561 gttataaatg acgtcgcgcc gccgctcgcg tctgatcgga tctggtattc tgtttatcag
     1621 tgcgtcgcac gcctcctgtc ccttctcgag atactggaaa cgaaaagcgg tccccatgct
     1681 gagcgtggcg gtggcgatat cgtgatggcc ctc
//
LOCUS       DATDHO010000905         2877 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_91548, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000905 DATDHO010000000
VERSION     DATDHO010000905.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2877)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2877)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2877
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91548"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(54..1814)
                     /locus_tag="VIY07_17830"
     CDS             complement(54..1814)
                     /locus_tag="VIY07_17830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEY6383650.1"
                     /translation="MRGIFSTLAIVWRIAGPYFFSEDRWAGRILLAAVIAIELSIVGI
                     NVLLNSWNNAFYNALQDKNWDEFIYQLGYFCVLAAIFIVLAVYQLYLNQWLQIRWRRW
                     LTQRYLDRWLVGANHYRMQLRGDAADNPDQRIAEDVKEFIDSGATGVGILPIGLGLLS
                     SVVTLGSFAVILWNLSGTAPLHIFGTAWMIPGYLFWAALVYAVIGTILTHLVGRALTA
                     LNFQQQRYEADFRFSLVRVRENSEQIALLDGEHAERHRLLMRFGNIVGNWLAIMSRQK
                     KLTFLTAGYGQVSSVFPFIVVSPAYFAGSIQLGGLMQTASAFGSVQGALSFFVTAYRS
                     IAEWRAVVERLAGFDENIAAAEAAATTPPVIKLAPGDANVVSFRDLAVRLPNGKPLVN
                     AGDVTIKLGEHVLVSGPSGSGKSTLFRALAGVWPFGSGTITVPKNARVMILPQRPYFP
                     IAPLAAAVAYPAGPGNFDAGRVAELIKECGLPALASRIEEEAHWNRMLSLGEQQRLGI
                     ARALLYEPDFLFLDEATASLDEPAEAQLYQLLERRLSRATIVSIGHRATLAAFHRRRL
                     ALNREGDHYTVQETNLAPAE"
     gene            2112..>2877
                     /locus_tag="VIY07_17835"
     CDS             2112..>2877
                     /locus_tag="VIY07_17835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
                     /protein_id="HEY6383651.1"
                     /translation="MSNRKPSAAATRRKFLGGAAVAGVATIAMPQVSRAQTATLRMQG
                     SWGAKDVFNEMAMDYVERVNAMAGGRLKIDYLVGGSVVHPFQVLDGVHNGVIDGAHTV
                     TVYWYGKHKAASLFGTGPVFGFNANEGLGWIHNGGGKELFEELQTQIMKVNVKSFLAM
                     PMPTQPLGWFKKPITAANDLKGMKYRTVGLAADLFQAMGASVAQLPGGEIVPAMERGV
                     IEGFEFNNPTSDRRFGAQDVAKNYMMGSHHQATEYFE"
BASE COUNT          630 a          848 c          877 g          522 t
ORIGIN      
        1 agtctgtccc tgaaggggcg gcggccggat tggtcgccgc cgcgtttctc ggcttactcg
       61 gcgggtgcga ggttcgtctc ctgcacggtg tagtgatcgc cttcgcgatt aagcgccaag
      121 cggcgtcgat gaaatgccgc aagcgtcgcc cggtggccga tcgagacgat ggtggcgcgg
      181 ctgagccttc gctcaagcaa ttggtaaagc tgggcctcag cgggttcgtc gagtgaagca
      241 gtggcctcgt ccagaaacaa aaagtctggt tcgtacagaa gcgcgcgagc gatgcccagc
      301 cgctgctgct cgcccagcga cagcattcga ttccaatgcg cttcttcctc gatgcgagac
      361 gcaagtgcgg gcaaaccgca ctccttgatc aactccgcaa cccgcccggc atcaaaattg
      421 ccaggtccgg ccgggtaggc gaccgccgcc gcgagcggcg caatcgggaa gtacggccgt
      481 tgcggcagga tcatcacgcg cgcattcttc ggcacggtga tcgtgccgct gccgaacggc
      541 cagacaccgg ccagtgcgcg gaacagggtg gacttgccgg aaccggatgg accgctcacc
      601 agtacgtgtt cgcccagctt gattgtaaca tcgccggcgt taacaagcgg cttgccgttc
      661 ggcagccgca cggcgagatc cctgaaactg acgacgttcg catcgcccgg tgcgagcttg
      721 ataaccggcg gcgtcgttgc ggccgcttcc gctgcggcga tattttcgtc gaaacccgcc
      781 agcctttcga ccaccgcacg ccattcggca atgctgcgat aagccgtgac gaagaacgaa
      841 agcgcgccct gcacgctgcc aaaggccgag gctgtctgca tcaagccgcc gagctggatg
      901 gatccggcga aataggccgg gctgacgacg ataaagggga agaccgacga tacctggcca
      961 tagccggcgg tgaggaaggt aagcttcttt tgccgggaca tgatcgcaag ccagtttccc
     1021 acgatgttgc cgaaccgcat caggagccga tgccgctcgg catgctcgcc gtccaggagc
     1081 gcgatttgct cggagttctc gcgcacgcgc acaagactga agcggaaatc ggcttcgtag
     1141 cgctgctgct ggaaattaag cgccgtcagt gcgcggccga ccaaatgcgt gaggatggtt
     1201 ccgatgacgg cgtaaacgag cgccgcccaa aacagatatc cggggatcat ccacgcagtt
     1261 ccgaaaatat gcagaggggc cgttccggac aaattccaga ggatcacggc gaacgacccg
     1321 agcgtcacca ccgaactcag gagacccagt ccgatgggca ggattccaac gcctgttgca
     1381 ccggaatcga tgaattcctt cacgtcctca gcaatgcgct gatccggatt atcggcagcg
     1441 tcgccgcgca actgcatccg ataatggttt gcgccgacca gccaccgatc caggtatctc
     1501 tgggtaagcc accgccgcca gcggatctgc agccattgat tgagatagag ctgataaacc
     1561 gcgagcacga tgaagattgc agcaaggacg caaaagtacc cgagttgata gatgaactca
     1621 tcccagttct tgtcctgcag cgcgttataa aaagcgttgt tccacgaatt gagaaggacg
     1681 ttgatcccca cgatcgacaa ctcgatggcg atcaccgctg ccaggagaat tcgtcccgcc
     1741 cagcgatcct cggaaaagaa gtaggggccg gcaattcgcc acacgatggc aagcgtcgag
     1801 aatatgcctc tcacgggagg tctcctgtca gaaacggatt gcagaggggt atggccagca
     1861 ccttctactt ctggctagtg ctgcgtagga ttcgatctgt ttccacggat tcagcccaaa
     1921 aaaagggtgt atcaagggca tccctcagat gcatttgcgt tgacgtaccc cggtgcggcc
     1981 caatattgct tccggccgcc gcacctcgta cgatcaagcc gcacgagttg cagatacacg
     2041 caaaaaccgg gtcgtggaat aagacccggc agtaaatgtt cacgggtagt gatccaaggg
     2101 aggagatcca aatgtccaat agaaaaccgt ccgcggccgc gactcgccgc aagtttcttg
     2161 gtggagccgc ggttgctggc gtggcgacga tcgcgatgcc gcaggtctcg cgcgcacaga
     2221 cggctacgct aagaatgcag ggctcctggg gagccaagga cgtcttcaac gagatggcga
     2281 tggactatgt cgagcgcgtc aacgctatgg ccggcggccg gctgaagatc gactacctcg
     2341 tcggcggttc ggtcgtacat ccgttccagg tactggacgg cgtgcataac ggcgttatcg
     2401 acggcgccca taccgtgacc gtttactggt acggcaagca caaggcggcg tcgctgttcg
     2461 gcaccggtcc agtgttcggg ttcaacgcca atgaaggcct cggctggatc cacaatggcg
     2521 gcggtaaaga gctgttcgag gaactccaga cccagatcat gaaggtcaat gtaaagagct
     2581 tcctcgcgat gccgatgcca acccagccgc taggctggtt caagaagccg atcaccgcgg
     2641 ctaatgatct caaaggcatg aaataccgga ccgttggtct cgcggcggac ctgttccagg
     2701 cgatgggtgc ctcagtcgcg cagcttccgg gtggtgaaat cgttccggcc atggagcgcg
     2761 gcgtgatcga gggcttcgag ttcaacaacc cgacctcgga ccgccgcttc ggtgcgcagg
     2821 acgttgccaa aaactacatg atgggcagcc accatcaggc aacggaatat ttcgaga
//
LOCUS       DATDHO010000906         5292 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_441882, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000906 DATDHO010000000
VERSION     DATDHO010000906.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5292
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441882"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..994
                     /locus_tag="VIY07_17840"
     CDS             <1..994
                     /locus_tag="VIY07_17840"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEY6383652.1"
                     /translation="DAPGFGPDTGRGFFEFLDFNVEAEALGYHSSFSVEHHFSGWNQV
                     SSTLMLLAALAMRTTSLRLGTAVIVLPWHNPVLLAEEVATLDLLSAGRLDLGIGKGYR
                     HSEFKGFQLPPEEAEARFEEALAVMMRAWTTRERFSHKGRFWHFEDIVVEPPPSQKPH
                     PPLWVAAGNPVSIRRAAACGFNLILDQYASPAMLGDRIAIYKAEREANGLGFDPMQVA
                     VARQLYVAKDKADKDAALVRQAEYTRRTIDASRYPSGKGGSHVLAYADRTGATEENAL
                     YGTPEEITEMIESLRDSGATYVLLTIAGGVDQLRRFAREVMPAFVQEPTARAAE"
     gene            1073..2290
                     /gene="glcE"
                     /locus_tag="VIY07_17845"
     CDS             1073..2290
                     /gene="glcE"
                     /locus_tag="VIY07_17845"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcE"
                     /protein_id="HEY6383653.1"
                     /translation="MTENILRPRDAKEVEDAVRWALGNEKALELAGRGTKRAIGRPSQ
                     TDVTLDVSGLTGVTLYEPAELVLSARSGTPMSEIEALLEKNNQALAFEPIDYGPLLGG
                     EANRGTLGGVIAGNLSGPRRIKSGAARDHFLGVTAVTGRGETIKSGGRVVKNVTGYDL
                     CKLFAGSWGTLAAMTDITVKVLPKAETEATVVIAGLDDAGACAAMAAAMGSSCDVSGA
                     AHLPDHVAAWFDGVPKSQPSTVFRLEGFAPSVAHRKDALATQLKSFGAVSIVEERTSR
                     ALWHDIRNVKPFAVDTALARPLWRISVAPSRGHQIATAITPAAQMFYDWAGGLIWVAM
                     PFAGEPDAAAIRRAVAAVGGYAALVRAPTAVRAAVDVFAPEESASLALAKRVKESFDP
                     KGVLNPGRMWAGI"
     gene            2292..3620
                     /gene="glcF"
                     /locus_tag="VIY07_17850"
     CDS             2292..3620
                     /gene="glcF"
                     /locus_tag="VIY07_17850"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcF"
                     /protein_id="HEY6383654.1"
                     /translation="MQTSFTITQLMDPQIASSEKILRACVHCGFCTATCPTYVLLGDE
                     LDSPRGRIYLIKEMLEQDKPATPEVVKHIDRCLSCLACMTTCPSGVHYMHLVDYARER
                     IEKTYKRPPIDRALRAVLARVLVNPGLFRLAVFAGLIARPLAPVFAALGMRPVAAMLR
                     LMPRRKPAPPAGPSGKVYPPEGKRRGRVALLSGCINPVLAPSTNEAAIRLLNRHGIEV
                     VSAAGEGCCGSLVHHMGREDEALSQARNNIDAWTYELEGQGLDAILVTVSGCGTTIKD
                     YDFLFRNDAAYAAKAARVSARTRDVTEYLAMLGLREAGASAPLTVAYHAACSLQHGQK
                     VLRQPKDLLSKAGFVVKDVPEGHLCCGSAGTYNILQSVLAEQLRARKVANIELLKPDA
                     IATGNIGCIMQLAAGTNIPVVHTVELLDWATGGPVPGPLVELAESRASAR"
     gene            4093..5169
                     /locus_tag="VIY07_17855"
     CDS             4093..5169
                     /locus_tag="VIY07_17855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383655.1"
                     /translation="MPATYKILIMGASYGSLLASKILFGGHSVHLICLPAEAELINAE
                     GFRVRLPVKGRQEPVEIDSRKLPGKVSAGGPGGVNPKDCDLVGLAMQEPQYRSPGVRE
                     LLASVAKSKVPCMSIMNMPPLPYVKRIPGLNYDTLKPAYTDPSVWDNFDPGLLTLCSP
                     DPQAIRPPDEKVNVLQVTLPTNFKVAKFDNDIHTGILRHLEKDIDAVRFDAPEGKIEL
                     PVKLRVHDSIFVPLAKWSMLLAGNYRCITKDGMRTAQEAVHSNIEEARSVYNFVFDLC
                     VKLGASPSDLVPFEKYAAAAQSLTRPASAARALQNGAPNIERADKLVQLIANQKGMSH
                     PVVDQIVALVDSRLEANRKKAAAA"
BASE COUNT         1053 a         1564 c         1644 g         1031 t
ORIGIN      
        1 cgacgcccca ggcttcggcc ctgacaccgg tcgaggtttt tttgaattcc tcgatttcaa
       61 tgttgaggca gaggcgctcg ggtaccattc aagcttttcg gtcgaacatc atttcagcgg
      121 gtggaatcag gtttcctcca cgttgatgtt gctcgctgcg cttgcaatgc gaacaacatc
      181 cctgcggctt ggcacagccg tgatcgtgct cccctggcat aatccggttt tgcttgcgga
      241 ggaggtcgcc acgctcgatc tcctctccgc aggccggctc gatctgggca tcggcaaagg
      301 ctatcgccac agcgaattca agggctttca gttgccgcct gaggaagccg aggctcgctt
      361 cgaggaagct ctcgccgtga tgatgcgggc ttggacgacc cgcgagcggt tttcgcacaa
      421 agggcgcttc tggcatttcg aggacattgt cgtcgagccc ccgccgtcgc aaaagccgca
      481 cccgccgctc tgggtggcgg ctgggaaccc ggtttcgatc aggcgcgcgg ccgcgtgcgg
      541 gttcaacctc attctcgacc aatatgcttc gcccgccatg ctgggcgatc ggattgcgat
      601 ctacaaggcc gagcgtgagg ccaatgggct cggttttgat ccaatgcagg tcgcggtcgc
      661 gcgtcagctc tatgtggcga aggacaaagc tgacaaggac gctgcgttgg tgcgccaggc
      721 cgaatacacc aggcgcacaa tagatgcgtc gcggtatccg tcgggcaaag gtgggtcgca
      781 cgtgctcgcc tacgccgacc ggacgggggc cacggaagaa aacgccctgt atggaactcc
      841 tgaagagatt acagagatga tcgaatcgtt gcgcgatagt ggcgcgacct atgtgctgct
      901 taccatcgcc ggcggagttg accagctgcg ccgcttcgca cgcgaagtca tgcctgcttt
      961 cgtgcaggag ccgacggcac gcgcggcgga atgatgtcga tcctttgatg tgtattgagc
     1021 caaacactca gctctgccat cgccgggctt gtcccgattc tcgagcctgg ccatgacaga
     1081 gaacattctt aggccccgcg atgcgaagga agtagaagat gccgtgcgct gggcacttgg
     1141 caatgagaag gcgcttgaac ttgccgggcg cgggaccaag cgcgccatcg gacggccgag
     1201 ccagactgac gtgacactcg acgtttccgg gttgaccgga gttacgctat atgagcccgc
     1261 cgaactggtg ctttcagcgc ggtccggcac gccaatgtct gaaatcgagg cattgctgga
     1321 aaaaaataac caggccctgg cgttcgaacc gatcgattac ggaccgttgc tcggtggtga
     1381 agccaaccgc ggcaccctgg gcggcgtcat cgccggcaat ctgtcgggac cacgccgcat
     1441 caaatcgggt gctgcgcgcg accatttcct cggcgtcacc gctgtcaccg gacggggcga
     1501 gacaattaaa tccggtggtc gcgtggtgaa aaacgtcacc ggctacgatc tttgcaagct
     1561 gtttgccgga tcttggggca cgcttgctgc gatgaccgat attaccgtga aggtcctgcc
     1621 caaggccgaa accgaggcaa ctgtggtcat tgcgggtctg gatgatgcag gggcgtgcgc
     1681 ggccatggcc gccgccatgg gttcctcgtg cgatgtctct ggagcagcgc atctgcctga
     1741 tcacgtcgca gcatggtttg atggtgtgcc gaaatcgcaa ccctccacgg tgttcaggct
     1801 cgagggcttt gcgccttccg tcgcgcatcg caaagacgct cttgcgacac agttgaaaag
     1861 ctttggagcg gtatcgatag tggaggaaag aacctcgcgc gcgctctggc atgacattcg
     1921 caacgtcaag ccatttgcag tggacacagc gcttgcgcgg ccgctttggc gcatttcagt
     1981 cgccccaagt cgcggtcacc aaatcgccac cgctattacc cccgcagcgc agatgttcta
     2041 tgactgggcc ggtggcctca tttgggtggc gatgccgttc gccggcgagc ccgatgcggc
     2101 tgcgatccgt cgtgccgtgg ccgcggtcgg tggatatgcc gccttggtcc gggcgccaac
     2161 cgcggtgcga gccgccgtcg acgtatttgc gccggaggaa tcagcctcgc ttgcactcgc
     2221 caagcgggta aaagagagct tcgacccgaa gggcgttctc aatcccgggc gaatgtgggc
     2281 gggcatttga gatgcagact tcgttcacca tcacgcagct catggacccg cagatcgcat
     2341 cttcggagaa aatcctgcgt gcctgcgtcc actgcggctt ctgcaccgcg acatgtccga
     2401 cctacgtttt actcggcgac gaactcgatt cgccgcgcgg acgcatctac ctgatcaagg
     2461 aaatgctgga acaggacaag ccggccactc ccgaggtggt caagcacatc gatcgctgcc
     2521 tgtcctgcct ggcctgcatg acaacctgtc catccggcgt gcactacatg cacctggtcg
     2581 actacgccag ggagcgaatc gagaaaacct acaaacggcc gcccatcgat cgcgccctgc
     2641 gtgccgtact ggcccgcgta ttggtgaatc cggggctgtt ccgccttgcg gtgttcgcag
     2701 gcctgatcgc ccggccattg gcgccggtat ttgccgccct tggcatgcgt cctgtggcgg
     2761 cgatgttgcg gctgatgccg cgccgcaagc ccgccccgcc ggcaggaccg tcgggcaagg
     2821 tttatcctcc ggaagggaag cggcgaggac gggtcgcttt gctgtctggc tgcatcaacc
     2881 cggtgctcgc gccatccacg aatgaggctg ccatccgctt gctcaaccgt cacggtatcg
     2941 aggtcgtgag cgcagcgggc gaaggctgct gcggctcgct ggtccatcac atggggcgcg
     3001 aggacgaggc gctgtcacaa gcccgcaaca atattgatgc gtggacgtat gaactagaag
     3061 gacaagggct ggacgccatc ctggttactg tttcgggctg cggtacgacg atcaaggact
     3121 acgattttct ttttcgcaac gatgccgcat atgccgcaaa ggctgctcgc gtttcggcgc
     3181 gcacacggga tgtgacggaa tacctggcca tgcttggctt gcgggaagca ggcgcctcgg
     3241 cgccgctcac ggttgcctat catgccgcct gctcccttca gcatgggcag aaggtattgc
     3301 gccagccgaa ggacctgctg tctaaagcgg gattcgtggt caaggacgtg ccggaaggtc
     3361 atttgtgttg tggttcggcg ggcacgtaca atattcttca gtcggtactg gcggaacaac
     3421 tgcgcgcgcg caaggttgcc aacatcgaac tcctcaagcc agatgcaatc gcgaccggaa
     3481 acatcggctg catcatgcag cttgccgccg gcaccaacat tccggtcgta catacagtcg
     3541 aattgctgga ctgggccacc ggcggccccg tgccgggccc gcttgttgaa ttggcggaaa
     3601 gcagagcttc cgcgcggtag cacgttcggg cgtaaatagc tgtttcactg gagactgatc
     3661 gagtcagcgg agggtcacca tggcgaaaag gcgcaagaag gcgaaagcga aaaaatcgag
     3721 gagaccaagg aaggtcaaac gtgccgcctc ggcacgcaag aaaaagggaa tgaagaaaac
     3781 ggcgagaagg acaaaggcaa agaggaagag ggctccaagc agggtggaag ttcctccttc
     3841 cgggtcaact gagcccgcag cgagcccgac atcaacactt tttggcgggt tgttcggcgg
     3901 cgagaagaca gaagggcact agcacacgcg tgcttcagcg aggcggtcgc cgctcagcgt
     3961 atgaccgcct cattgttcgc ggcggcgccg attgcatcga tatggtgggc cgcatagcat
     4021 gcggcgacga gggtatggcc ctaagggtcg ggactctttc gctttttacg aacgacaata
     4081 agggaggcgg caatgccggc gacttataaa atcctgatca tgggcgcgtc ctatggatcg
     4141 ctgctcgctt ccaagatcct ctttggcggc cattcggtgc atctgatctg cctgccggcg
     4201 gaagcggaat taatcaacgc cgaaggattt cgcgtgcggc tgccagtcaa aggccgccag
     4261 gagccggtcg agatcgactc gcgcaagttg ccgggcaagg tcagcgccgg cggtccaggc
     4321 ggggtcaatc cgaaagactg cgacctcgtc ggcctcgcga tgcaggagcc gcaatatcgc
     4381 tcgcccggcg ttcgtgaatt gctggcttca gtggcgaaat cgaaagtccc gtgcatgtcg
     4441 atcatgaaca tgccgccact tccttacgtg aagcgaattc ctggtctcaa ctacgatacg
     4501 ctcaaacccg cttataccga tcccagtgtg tgggacaact ttgatccggg cctgctgacc
     4561 ttgtgcagtc ccgacccgca ggcgatccgt ccacctgacg agaaggtgaa cgtgctccag
     4621 gtgaccctgc ccaccaactt caaggtcgcc aagttcgaca atgacatcca caccggcata
     4681 ttgcgtcacc ttgaaaagga catcgacgcc gttcgcttcg atgcgcctga aggcaagatc
     4741 gaattgcccg taaaactgcg cgtgcatgat tcaatctttg tcccgcttgc caagtggtcg
     4801 atgctgctcg ccggcaacta ccgctgcatc acgaaagatg gcatgcgcac cgcgcaagag
     4861 gcggtgcatt cgaacatcga ggaagcgcgc tcggtctaca attttgtgtt cgacctctgc
     4921 gtcaagctgg gagcttcgcc gagcgacctc gtgcctttcg agaaatatgc cgctgcggcg
     4981 caaagcctga cgcggcccgc gtcggcggcg cgggcgctgc aaaatggcgc gccgaatatc
     5041 gaacgtgccg acaagctggt gcagctgatc gcaaatcaga agggcatgag ccatccggtc
     5101 gtcgatcaga tcgtcgcgct ggtcgattcg cgcctcgaag ccaatcgcaa gaaggcagct
     5161 gcggcctagt gcgtagccgt tgcagaagcg gctgaaggca accagtgact ccttgtggaa
     5221 aactgcccgg cctcggccga attcatgagg cgcagtatcg gatcgggcac cggaattgtg
     5281 acattcacgc aa
//
LOCUS       DATDHO010000907         2740 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_441903, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000907 DATDHO010000000
VERSION     DATDHO010000907.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_441903"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            472..1458
                     /locus_tag="VIY07_17860"
     CDS             472..1458
                     /locus_tag="VIY07_17860"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6383656.1"
                     /translation="MKRRDFLGVIGGAALAWPFETHGQTVTQWPDRPVRLLVTVGAGG
                     AADTLSRNLSQGFPQFANGQPLIVENRPGAGGTIAAAAVAREKPDGYNLFLAEVGPNA
                     VSHVLGAKLPYDPHTAFTPIIHVANLPAVMLIRPGHPFTTLPEFIAAAKQSPGKFNYA
                     SAGPGNWTHLFMAYLNSQAGIDQVNVIYRSGSEMLTALLRGEADTAVITVSTALGQIK
                     EGKVRTLAGLSTRPMRQLPDTPPVARTIPGFDVAVWHGIAGPAGMDPALVARINGIFN
                     QVLQVPSVRTAISEAQAADIIGGTPQDFDAFIKNELKRWPDVVKAAGIKPEQ"
     gene            1535..2413
                     /locus_tag="VIY07_17865"
     CDS             1535..2413
                     /locus_tag="VIY07_17865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HEY6383657.1"
                     /translation="MSNTSNSKGAFARRLKQPGLISAPGVFDMISARIADSMGFDVLY
                     MTGYGVVASHLGLPDAGLASYTEMVGRVRQIAQGSITPLVADGDTGYGGLLNVDFTVR
                     GYEAAGAQAIQIEDQEYPKKCGHTPGRRVVAIEDAARRIKVAAEARSSKDFLIVARTD
                     ARTSLGLNEALRRGEAFLKAGADLLFIESPESEAEMERIGRTFGVPLVANMVEGGRTP
                     ILSRSELERLGFKLAIFPASGFLAMGAALRSIYGEIRNNGSTKHWDGELYDFGDFSRL
                     MGFERVWAFEREHVES"
BASE COUNT          493 a          819 c          873 g          555 t
ORIGIN      
        1 tgtgttatcg gcgccaatgc gatttgctgg tcgctggttg tccgatctcg gggctaaagc
       61 ggacatgacc attgcggcat gtctgctttt gcggtcgcta ttgggtgtaa agcggacatg
      121 gcctattgca ccgcacatgt ccgcttttaa cccaaagcgg acatgctgca ctccggaacc
      181 ccttccagac tgccggtgcg ggttgatacg ctgcgtgacc gttcagcggg ggcagcgatg
      241 aggcggcgcg agtttatcac gtttctcggc ggtgcggtta cttggtcggt tgcggcgcgt
      301 gtgcaacaag ttgaaaggat gcgccgcatc ggtcttcgca actgcaacgt tgttgcctgt
      361 tttgaccgga ttcggacatt caagctcgcc caatgcatcg cccgcccgtt gtgcctttga
      421 gggtctgatt attgcaggta tcgtcccttg tcctgatccg gggaggcgca catgaaacgg
      481 cgtgattttt tgggtgttat tggcggagcg gcgctggcgt ggccgttcga gacgcacggg
      541 cagacggtga cgcaatggcc cgatcgcccg gtgcggctac tggtgacggt cggcgccggc
      601 ggtgcggccg acacgctgtc gcgcaacctg tcgcaaggct ttccgcaatt cgccaacggt
      661 cagccgctga tcgtggaaaa ccggcccggt gccggcggaa ccatcgccgc ggccgccgtc
      721 gcgcgcgaga aaccggatgg ctataacctt ttcctcgcgg aagtcgggcc caatgcggtg
      781 tcgcatgtgc tcggtgccaa gcttccctac gacccgcata ccgcgttcac gccgatcatc
      841 catgtcgcca acctgccggc ggtgatgctg atccggccag ggcatccgtt tacgacgttg
      901 cctgaattca tcgccgcggc gaagcagagt cccggcaagt tcaattatgc atcggcgggt
      961 cccggcaact ggacgcatct gttcatggcc tatctcaaca gccaggccgg aatcgatcag
     1021 gtcaatgtca tctatcgttc cggatcggaa atgctgacgg cgctgctgcg cggcgaagct
     1081 gacaccgcgg tcatcaccgt ctccacggcg ctcggtcaga tcaaggaagg caaggttcga
     1141 acgctcgccg ggctttcaac gcgtccgatg cgccaactgc cggacacgcc gccggtggcc
     1201 aggaccatcc ccggcttcga cgtcgcggtc tggcacggca tcgcaggtcc cgccggcatg
     1261 gaccctgcgc tggtcgcacg catcaacggc atcttcaatc aagttctgca ggtgccctcg
     1321 gtgcgcacgg cgatatcaga agcacaggcc gccgacatca tcggcggcac gccgcaggat
     1381 ttcgatgcct tcatcaagaa cgaactgaag cgctggcccg acgtggtcaa ggctgctggg
     1441 atcaagccgg agcaataatg tcgtgccgtc tcattttgcc gggacggcgg acgcgccgga
     1501 ccgcgcggcg gcgattgccc aaacggaacg aggaatgagc aacacatcaa actcgaaagg
     1561 cgcgtttgcc aggcgcttga agcagccggg actgatctcg gcgcccggcg tgttcgacat
     1621 gatctcggca cggatcgccg acagcatggg tttcgacgtg ctgtacatga ccggctacgg
     1681 cgtggtcgcc tcgcatctcg gtctgccgga tgcggggctt gcgagctaca ctgagatggt
     1741 cggccgcgtg cgtcagatcg ctcagggtag cattacgccg ctcgttgctg atggcgacac
     1801 gggctatggc ggcctcctca atgtcgattt caccgtccgc ggctatgagg cggcgggcgc
     1861 gcaggcgatc cagatcgagg accaggaata tcccaagaaa tgcggccaca cgccggggcg
     1921 ccgcgtcgtt gcgatcgagg acgccgcgcg gcggatcaag gtggctgccg aggcgcgatc
     1981 gtcgaaggac tttctgatcg tcgcgcggac cgacgctcgc acgtcgctcg gcctcaacga
     2041 ggcgctgcgg cgcggcgaag cgttcctgaa ggcgggcgca gatttgctgt tcatcgaatc
     2101 gccggagagc gaagcggaga tggagcggat cggccgtacg ttcggcgtgc cgctggtcgc
     2161 aaacatggtt gagggcggcc gcacgccgat cctgagccgg tcggaattgg aacggctcgg
     2221 cttcaagctc gcgatctttc cggcatccgg ctttcttgcc atgggcgccg cgttgcgttc
     2281 gatctatggg gaaatccgaa acaacggatc gaccaaacac tgggacggcg agttatacga
     2341 ctttggtgat ttctcacgcc tcatggggtt cgaacgggtc tgggcgttcg aacgggagca
     2401 cgtggagtct tgagacgatt tgcacgcggc gccgacatag gtagcccagc cagatcttct
     2461 gtattttctg gcctttgtcg tacgcgactt acaatttgct gttcgtcacc taattagaag
     2521 aagccggatt cgaataggtt ttacgacagc cctcagcacc cagttacgcg gccgatttca
     2581 tcctggcacg aaagcctgcc gcctaacccc agtcgccaaa ccgttcgcgg ggtgatgtcc
     2641 gcttccggcc caaaccggac atttgttttt gcaccgcaca tgtccgcttt cgggggtaaa
     2701 gcggacatcg gttgatgcac tgcaaatgtc cgcttttgat
//
LOCUS       DATDHO010000908         4512 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_242280, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000908 DATDHO010000000
VERSION     DATDHO010000908.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4512)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4512)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4512
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_242280"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1355
                     /locus_tag="VIY07_17870"
     CDS             <1..1355
                     /locus_tag="VIY07_17870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6383658.1"
                     /translation="VLKVISRSTFDLQTVLQALVEAAARLCEADQGTIAREQGGAFVR
                     AASYGFSEEFQELVKDLPVKPERGSATGRALLEGKVVHIPDVKADPDYTFVEGQKFGD
                     FRTILSVPMLREGTPIGVLALTRHAVNPFTDKQIELVTTFADQAAIAIENVRLFESVE
                     ERTRELGRSLEELRTAQDRLVQTEKLASLGQLTAGIAHEIKNPLNFVNNFSSVSVELI
                     EELRQTLAGAKLGDKLQSEIGEIADMLQGNLDKVVQHGKRADSIVKNMLLHSRSGSGE
                     HRPVDINAVVEESLNLAYHGARAEKQGFNITLNRSFDPTAGEVDLFPQEITRVLLNVI
                     SNGFYAATKRKDQGGDNGFEPTLAATTRNLGDRVEIRIRDNGTGIPPEVKDKMFNPFF
                     TTKPAGEGTGLGLSISHDIIVKQHAGSIEVDTQPGEFTEFRIILPRTAASLGKSGAQA
                     "
     gene            1352..1741
                     /locus_tag="VIY07_17875"
     CDS             1352..1741
                     /locus_tag="VIY07_17875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6383659.1"
                     /translation="MTVLILVVDDEPDVEMLFRQQFRRDLRVGRFTMEFAQSANAALQ
                     CITVARTASLILILSDINMPGMTGLELLPKAKAARPDVPVIMITAYGDAETKRKALEG
                     GAEGLFTKPIDFVMLRNEIDTRVAGAA"
     gene            1946..2125
                     /locus_tag="VIY07_17880"
     CDS             1946..2125
                     /locus_tag="VIY07_17880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3606 domain-containing protein"
                     /protein_id="HEY6383660.1"
                     /translation="MADSKQKRGKSDRSKISGKSPYEVYYVARKYGVSADAVRKVIKR
                     VGNTRKKIYAALEKM"
     gene            complement(2212..2700)
                     /locus_tag="VIY07_17885"
     CDS             complement(2212..2700)
                     /locus_tag="VIY07_17885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GcrA family cell cycle regulator"
                     /protein_id="HEY6383661.1"
                     /translation="MGWTDERVELLKKLWADGLSASQIAAELGGITRNAVIGKVHRLG
                     LSGRAKSPSSTTPRPRKARSSGHMMRVPRPSMRGNTALAYDYDLEPELELIEIPVEQR
                     KTLLQLTEKTCRWPVGDPGSGDFFFCGGETANELPYCSYHCRVAYQPTSERRRDKRPF
                     KN"
     gene            3069..4307
                     /locus_tag="VIY07_17890"
     CDS             3069..4307
                     /locus_tag="VIY07_17890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEY6383662.1"
                     /translation="MRRRTGLWKTLVVSSHLLPTYARVDLAFERGEGAWLITADGERY
                     LDFTSGVAVNALGHAHPQLVQALTDQAQKVWHVSNLYRIPEGEKLADRLCAASFADTV
                     FFQNSGAEALECAIKIARKYQSASGKPERYRIITFEGAFHGRTLTTIAATGNKKYLEG
                     FGPPVDGFDQVPFGDLDAVKRTIGPATAAILIEPIQGEGGVRVAAPTFLRALRQLCDQ
                     HGLLLLFDEVQTGIARTGEMFAYERSGVKPDVMAIAKALGGGFPIGACLATAEASKGM
                     TVGTHGSTFGGNPLAMAVGNAVLDVVMAPGFLDRMRKNALLLKQRLAELKDRHSSVIA
                     EVRGEGLLIGLRMIPQASEMVDQLRAEKMITVAAGDNVVRLLPPLIIGEKEITQAVGC
                     IDRACAKLAQTHARAAKVAS"
     gene            4304..>4512
                     /locus_tag="VIY07_17895"
     CDS             4304..>4512
                     /locus_tag="VIY07_17895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEY6383663.1"
                     /translation="MITNGVRHFLDLIDIPKPVLGHLIDTSRAMKRERARGTNITPLA
                     GKTLAMVFDKPSTRTRVSFDVAMRQL"
BASE COUNT          953 a         1311 c         1357 g          891 t
ORIGIN      
        1 atgtgttgaa ggtcatcagc cgctcgacgt tcgacctcca gaccgtgctg caagcattgg
       61 tggaggcggc cgcccgactg tgcgaggccg accaggggac gatcgcccgc gaacagggcg
      121 gagcatttgt ccgcgctgcg agttacggct tttcagagga attccaggag ctcgtgaaag
      181 atttgccggt caaaccggag cgcggctcgg cgaccggacg agccctgctt gagggcaagg
      241 tcgttcatat tccggacgtc aaggcggatc ctgactacac gtttgtcgag gggcagaaat
      301 tcggcgattt tcgcaccatc ctcagcgttc ccatgttgcg tgagggaacg ccgatcggtg
      361 tgctggcctt gacgcgccac gcagtaaatc ctttcaccga caaacagatc gagttggtca
      421 cgacgtttgc cgaccaggcg gcgatcgcga tcgaaaatgt tcgcctgttt gagagcgtcg
      481 aggagcgcac gcgcgaactc ggccgatcgc ttgaagagct gcgtacggcg caggaccggc
      541 tggttcagac cgagaagctg gcctcgctgg gtcagctcac cgccggaatt gcccatgaaa
      601 tcaaaaaccc gcttaacttc gtcaataatt tctcttcggt ttcggtcgaa ctgatcgaag
      661 agctgcgaca gacccttgca ggagccaagc tcggcgacaa actgcagagc gaaatcggcg
      721 agattgcgga catgctgcag ggcaatctcg acaaggtcgt acagcacggc aagcgtgccg
      781 attccatcgt gaagaacatg ctcctgcatt cgcgcagcgg ctcgggcgag catcgtcctg
      841 tcgacatcaa tgctgtcgtg gaggaaagcc tcaatctcgc ctatcacggc gccagagccg
      901 agaagcaggg gttcaacata accttgaacc ggtcgttcga tccgactgcc ggcgaggtcg
      961 accttttccc acaggaaatc acgcgggtcc tgctgaacgt gatttcaaac ggcttctacg
     1021 cggcaacaaa acgcaaggac cagggtggcg acaacggctt tgagccaacc ctcgccgcga
     1081 ccaccaggaa tctcggcgac cgcgtcgaga tccgcatccg cgacaatggc accggcattc
     1141 cgcccgaggt gaaggacaag atgttcaacc cgttcttcac aacaaagccg gctggagagg
     1201 ggacagggct tggcctctcc atcagccacg atatcatcgt caaacagcac gccggctcga
     1261 tcgaagtgga tacgcagccc ggcgaattca cggaattcag gatcattctc ccgcgaaccg
     1321 cggcttccct aggcaaatca ggagcacaag cgtgaccgtc cttattctcg tggtcgacga
     1381 cgaacccgac gtcgaaatgc tgtttcgcca gcaattccgg cgcgaccttc gcgtgggccg
     1441 cttcaccatg gagtttgccc agtcggctaa cgcagccctg cagtgcataa ccgttgccag
     1501 gaccgcgtcc ttgatattga tcctgtcgga catcaacatg ccgggaatga cgggactcga
     1561 attattgccg aaagccaagg cggcgcgacc tgacgttccg gtaatcatga tcaccgcata
     1621 cggcgacgcc gagacgaagc gcaaggcttt ggagggcggc gccgaggggc tttttacaaa
     1681 accaatagat tttgtgatgc tgcgcaacga aatcgacaca cgcgtcgcag gagccgcatg
     1741 atctgtgggg cgtgcgtcgc tctcttacgc aaagccacgg gctcggccga tcgaagcaac
     1801 cgcaaacttt agcttcacct cagtaccgcg aagcgctcgg cctcacgata ccgtcgcagc
     1861 tgctcggact tgccgaccga ctgatcgaat gatgatatgt tgccgtttgt ttatgctgat
     1921 gcagattgag gcagaggaga ttgctatggc cgacagtaag cagaagcgtg gaaaatcgga
     1981 tcgctcgaaa atttcgggaa aatcgccgta tgaagtttat tacgttgcaa gaaagtacgg
     2041 tgtgagcgca gatgccgttc gcaaggttat caagcgggtc ggcaataccc gaaagaagat
     2101 ctacgcggcg cttgagaaga tgtaattgcg ttattgggtt gccgacctga cagcgcgatc
     2161 cctcgcctta atggctcata gcttcgcggt gcctcgcaag attgcgtgct gtcagttttt
     2221 gaatggtctc ttgtcccttc ggcgctcgct cgtcggctga taggcgacgc ggcagtgata
     2281 ggagcaatac ggcaattcgt tcgctgtttc cccgccgcag aagaaaaagt ctccgctgcc
     2341 gggatcaccc accggccaac ggcaggtctt ctccgtcaac tgcagcaggg tcttgcgctg
     2401 ctcaaccgga atttcaatca gctccagttc cggctcgagg tcgtagtcat aggcaagggc
     2461 ggtattgccg cgcatggacg gccttggaac gcgcatcatg tggccggaag aacgggcttt
     2521 ccgtggccgt ggcgttgtcg aggaggggct cttggcgcgt cccgaaagtc cgaggcggtg
     2581 aaccttgccg ataaccgcat tgcgggtgat ccccccgagt tcggccgcga tttggctggc
     2641 ggataatccg tccgcccata gcttcttcag aagctcgacc ctctcgtccg tccagcccat
     2701 tctattttct cctcaggctt caaggccttg gatggaatcc aaccccgtcg tcgggcgccg
     2761 gataaggcgc cagacgcaaa cgcgtcaggg atggacagaa atctctcaat agcacgagat
     2821 gtcgtactat ctgccgagga agctacaata ggcagtgact ctcctgcaag ccgttgcaag
     2881 cctcagtgac tggctactaa caggttttcc tttagaatcc ggccttgcgg cacaattgag
     2941 tcggatcgct caggttgtgt tgacagggcg ggggccggca atagaataaa aaaagtgccg
     3001 cccggcgagg cggcacattt cttttcgggt cgcgcatgac cccgaaaagc ccggttttcg
     3061 gcaaagtcat gcgcaggcga actggactat ggaagacgct ggtcgtgagc tctcatctat
     3121 tgccaactta tgcgcgggtc gatctcgctt tcgagcgggg cgaaggcgct tggctaatca
     3181 cggctgacgg cgagcgctat ctcgatttta cgtcaggtgt tgcggtcaat gcgcttgggc
     3241 acgcccatcc gcaactggtc caggccttga ctgaccaggc gcagaaggtc tggcacgtct
     3301 ccaaccttta tcgaataccc gaaggcgaaa agctggcgga caggctgtgt gcggcgagct
     3361 tcgccgacac ggtatttttt cagaactcag gcgccgaagc cctggaatgc gcgatcaaga
     3421 tcgctcgcaa ataccaatcg gcctcaggca agcccgagcg ctatcgcatc attaccttcg
     3481 aaggcgcctt ccacggccgc acactgacga cgatcgctgc caccggtaac aagaaatatc
     3541 tcgaaggctt cgggccgccg gtcgacggtt ttgaccaggt gccgttcggc gacctcgacg
     3601 cagtcaaacg tacaattggc cccgctacgg cggcgatact gattgagccg atacagggcg
     3661 aaggcggagt gcgcgttgcg gcgccaacct tcctgcgcgc gttgcggcag ctttgcgacc
     3721 agcacggcct gctgctgctg tttgatgagg ttcagacagg catcgccagg accggcgaga
     3781 tgtttgccta cgagcgcagc ggcgtgaaac cggacgtcat ggccatcgca aaggcactcg
     3841 gcggcggctt tccgatcggc gcctgccttg cgaccgcgga agcctcaaaa ggcatgaccg
     3901 tcgggacgca cggctcgacc tttggcggca atccgctggc aatggcggtc ggcaatgcgg
     3961 tcctcgacgt ggtgatggct cccggttttc ttgaccgcat gcgcaagaat gccttgctgc
     4021 tcaagcagcg gctggccgag ctcaaggacc gccattcgtc ggtcatcgcc gaagtgcgcg
     4081 gcgaaggtct gctcatcggc ctgcgcatga ttccgcaggc ttcagagatg gtggaccagt
     4141 tgcgcgccga gaaaatgatc acggtcgccg cgggcgacaa cgtggtccgg ctgctgccgc
     4201 ctctcattat tggcgagaag gagatcacgc aggcggtggg atgcatcgat cgcgcctgtg
     4261 cgaagcttgc tcagacgcat gcgcgagcgg ccaaggtggc gtcatgatca cgaacggcgt
     4321 caggcatttt ctcgatctga tcgatatccc gaagccggtc cttggccatc tgatcgatac
     4381 gagccgggcc atgaagcggg agcgcgctcg cggcaccaat atcacccctc ttgccggaaa
     4441 aacactggcg atggtgttcg acaagccatc gacgcggacc cgggtatcgt tcgatgttgc
     4501 catgcgacag ct
//
LOCUS       DATDHO010000909         2592 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_343260, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000909 DATDHO010000000
VERSION     DATDHO010000909.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2592)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2592)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2592
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343260"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1359
                     /locus_tag="VIY07_17900"
     CDS             <1..1359
                     /locus_tag="VIY07_17900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383664.1"
                     /translation="INNLSASEFLILGTDLRVSRGEPARPPILFLPIDVEGDGPILDV
                     NGEDYKDSDTTNPSRMHDFVLRLQATSFPDADSAQIRVDYVAAHRPQLQINPAPGRGN
                     FKSPDIDLLGPFGAVIPGAVKGAPNTLKITVHNRGSLQATQVQVHVKWLPFTVSAGSW
                     ISLPDPSPFTVPALGSTSFAMKWDIPSSVKVGDVEAKHFCVRVDIDRYRDPAHPEHEE
                     IVVFDNWAQSNFEAVAVPNGSPSDRIRTVTTATNKLAREATYLFTAESERDGYRIYVG
                     NAWLRLPSGDTRAIELAYENLSDDPLHGAAFAQHREELNARPNHTSVTSWLVPENTEC
                     DTPREWWGVSLDMRSGRRTWFEDIRRNGELVTARVLAGQRDQKVALTFGEVHLAAWPA
                     DRPDRVSLTEGLIRNDGEARVLLSNETLAEIAAQSRIIAVLARKPDAEFATAVSEPVR
                     IA"
     gene            1645..>2592
                     /locus_tag="VIY07_17905"
     CDS             1645..>2592
                     /locus_tag="VIY07_17905"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6383665.1"
                     /translation="MFRHSTNTASFFPCLIAAFIFSLSAAGSAWAAQAAGNTNFGKDA
                     LKKNARGSYTRAADLVVVGTVVTMAAGKPNARGLAVTGGKIAFVGDAASARKRLRPGG
                     RLIALEPGEVVIPGLVDAHIHMIEAGLMRQRCALDMPGGACEAKNKVDALKMIAKYSK
                     EHPDLPGKWVIGSGWSGDWDWVNRQLGPSAAELDAVVADRPAVFYDDNGHSAWLNSLA
                     LDAAKIKTCKPDPPRGRIECKDGDKDGPPSGTLREAAVDLVEKVVPKPTPDQWLAGLL
                     EAQTYLHSLGITMLQDANVNPGMVDAYSKAATNRQLTMKV"
BASE COUNT          517 a          801 c          764 g          510 t
ORIGIN      
        1 atcaacaatc tcagcgcatc cgagtttctt atcctcggta cagatctccg cgtcagccgt
       61 ggagaacctg cacggccacc gattctcttt ctgcccatcg atgttgaagg cgacggcccg
      121 atcctggacg tcaacggcga ggactataaa gacagtgaca cgacgaaccc ctcgcgcatg
      181 cacgatttcg tgcttcgcct ccaggcgacc tcatttccgg atgccgacag cgcgcagatt
      241 cgtgtggact atgttgcagc ccatcgtcca cagcttcaga tcaatcccgc gcccggacgg
      301 ggcaacttca agagccccga tatcgatctc ctgggcccat tcggggcggt gattccaggc
      361 gcggtgaagg gcgcgccgaa cacgctcaag atcactgtgc acaatcgtgg aagcctgcaa
      421 gccacccagg tgcaggtaca tgtgaaatgg ctgcccttca ccgtatccgc tggaagttgg
      481 atttccctgc ccgatccgtc tccgttcacc gttcccgcgc tcggttccac atcctttgcg
      541 atgaagtggg acataccttc ttcagtcaaa gtcggggatg ttgaagcgaa acacttctgc
      601 gtgcgtgtcg atatcgaccg ctaccgcgac ccggcgcatc ccgaacacga agagatcgtt
      661 gtcttcgata actgggcgca atcgaacttc gaagcagttg ctgttccgaa cggctcccca
      721 tccgatcgca ttcgcacagt tacgacggca acaaataagc tagcccgcga agctacctac
      781 ctcttcaccg ccgaatctga gcgcgacggc tatcgcatct acgtcggaaa cgcctggctt
      841 cgccttccct cgggcgacac ccgggcgatc gaacttgctt acgagaatct ctccgacgat
      901 ccgttgcatg gagctgcctt cgcacagcat cgagaagagc tcaacgcgcg tccaaaccac
      961 acgtcggtga catcttggct ggttccggag aacaccgagt gcgatacgcc gcgggagtgg
     1021 tggggtgtct cactcgacat gcgatcggga cgccgcacat ggttcgagga tatccgccgt
     1081 aacggagaac tggtaacggc gcgagtcctg gccggtcaac gcgaccagaa ggtcgccttg
     1141 actttcggtg aagtccatct agccgcatgg ccggcagaca ggcccgatcg cgtgtcgctg
     1201 acagaaggcc tgatccgcaa cgacggtgaa gctcgagtgc tgttgagcaa tgaaacattg
     1261 gcggagatcg ctgctcaatc cagaattatt gcggtgctcg cacgaaaacc ggacgccgag
     1321 ttcgccacgg cggtgtcgga accggtgcgg atcgcgtgat gctcgtcgac agctaatccg
     1381 caacttatta gaagaaacag tcgaaagcct gtcggtttcg cccattcaaa ctacaggagt
     1441 ttgccggcct taggtacgtc gttcatcgga ttggccccgg catttaattt cccctcttcg
     1501 cgcccgcctt tgtccgtaaa gtaacgctta ccctttccca tttcgcgttt cattgctttg
     1561 ctgtcgcgcc tatcctgtcg gtttgacttt ttagtgcgtc aatactatct gctcgtcgag
     1621 cgcttttaat ccaggagggt ttatatgttt cgccattcta ccaacactgc ttcttttttt
     1681 ccctgcctta ttgcggcgtt cattttttcg ctctctgcag cggggagtgc ttgggcggca
     1741 caggcggcgg gcaacaccaa tttcgggaaa gacgcgctta agaagaacgc taggggcagc
     1801 tatacgcgag ccgccgacct ggtggtggtc ggaaccgtcg tgaccatggc ggccggcaag
     1861 ccgaacgccc ggggactggc cgtgaccggc ggcaagatcg cattcgtcgg cgacgccgcc
     1921 tccgcgcgga agcggctgcg cccgggcggc cggctgatcg cgctcgagcc gggcgaggtg
     1981 gtcatccctg gcctggtgga cgcccatatc cacatgatag aggcgggcct catgcgccag
     2041 cggtgcgccc tggacatgcc cggcggggcg tgcgaagcca agaacaaggt cgacgcgctc
     2101 aagatgatcg ccaagtacag caaggagcat ccggacctcc cagggaagtg ggtcatcggc
     2161 agcggatggt cgggggactg ggactgggtc aaccgccagc tcggcccctc ggccgccgag
     2221 ctggatgcgg tggtggccga ccgcccagcc gtgttctacg atgacaacgg ccactcggcg
     2281 tggctgaatt cgctggcgct cgacgcggcc aagattaaaa cctgtaagcc ggatccccct
     2341 cggggaagga tcgagtgcaa ggacggcgac aaggacggcc cacccagcgg gaccttgagg
     2401 gaggccgcgg tggacctcgt cgagaaggta gtgcccaagc cgaccccgga ccagtggctg
     2461 gccggcttgc tcgaggccca gacctatctt cactcgctcg gcatcacgat gctgcaggac
     2521 gccaacgtga atcccggcat ggtggacgcc tactctaagg ccgccacaaa ccggcaactg
     2581 acgatgaagg tc
//
LOCUS       DATDHO010000910         2740 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_195371, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000910 DATDHO010000000
VERSION     DATDHO010000910.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2740
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_195371"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VIY07_17910"
     CDS             complement(<1..443)
                     /locus_tag="VIY07_17910"
                     /inference="COORDINATES: protein motif:HMM:NF016408.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymer-forming cytoskeletal protein"
                     /protein_id="HEY6383666.1"
                     /translation="MFGKSKDNAADTNRDASSPAQEIKRSAVGHPSAPETTSSISSGL
                     SIVGKIVGQGKLAIFGHVEGEIHASTVQIGDGAQVEGDIVAEELTIGGRVKGTIHANR
                     VKLNSTAVVDGDIYHRSLAIEENAHFEGMSRRQENVIDTPSLVPA"
     gene            complement(487..1848)
                     /gene="alr"
                     /locus_tag="VIY07_17915"
     CDS             complement(487..1848)
                     /gene="alr"
                     /locus_tag="VIY07_17915"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEY6383667.1"
                     /translation="MSNLATLSVQKAAEELPLVVSSSDINGSVIDDTVVQRNCFLHIR
                     GNLLANLTIEPGAKVVVEGSVDGKIINRGGRLVVNNKAHAACITSDGPAEAEACGVLR
                     IDLTAIVSNWERLAKYAAVECAAVVKGNAYGCGIEPIAGALAKTGCKTFFVSDIPEAR
                     RVRAVAPGAAIYVLRGLYSGPRQAFAEVDARPVIYSSIEMAEWDQLARSHRWAGGCAL
                     HVDTGESRLGFSMEEAAAFAPSARDHGITLLMSRLDNFDKPTRTSSDYQISLFRELRR
                     LYHGIPASLANSSDIFSVPNAHFDLIRAGAALYGVNPTPDADNPMLPVIELRARIVQV
                     LSLSRGETIADSAGWVAKRPTRLALVSTGYADGYPRAFDNRLQAIVGGLRCLVVGQPS
                     MDLLAIDVTDVSDPTAVRPGKMATLVGPEMTIDDLTAASKSSSREVLSHLGRRFHRIY
                     HVT"
     gene            complement(2083..2283)
                     /locus_tag="VIY07_17920"
     CDS             complement(2083..2283)
                     /locus_tag="VIY07_17920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383668.1"
                     /translation="MKNQIIVPLIVVGAIVIAIPIFILGMFRLVWELAMSLATPRAPI
                     VTDKIRQLAAAAETRMSGRAGK"
     gene            complement(2288..>2740)
                     /locus_tag="VIY07_17925"
     CDS             complement(2288..>2740)
                     /locus_tag="VIY07_17925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383669.1"
                     /translation="SDVGVAVLWDEAKEIVRARAPSLSWLLPPTGKSPLEAQASVPAV
                     VTSAELAQQLRPVALGLATMRQDVDQLAATIKQLSAKQEKMAQDISILPAIEQDIREK
                     LASPAQPRTAAPRKPAQQSATQPSSVSPEAPVSGAPLRLMESRGQSAR"
BASE COUNT          552 a          812 c          787 g          589 t
ORIGIN      
        1 ttcgccggaa cgagcgaggg cgtatcgatg acattctcct gtcgtcgtga cattccctcg
       61 aaatgcgcat tctcctcgat tgccagggac cgatgataga tatcgccgtc aaccacagcg
      121 gtgctattca acttgacgcg gttggcgtgg atcgtgccct tgacgcgacc gccgatcgtt
      181 aattcctccg cgacaatatc gccctcgacc tgcgcgccat cgcctatctg gacagtcgag
      241 gcgtgtattt ctccctcgac gtgaccaaaa atcgcgagct tcccttggcc gacaatcttg
      301 ccgacaatcg aaagtcccga actgatggag gaagtcgttt ctggcgccga cggatgtcca
      361 acggcagagc gtttgatttc ctgcgccggt gacgaggcat cacgattggt gtctgccgca
      421 ttgtcttttg attttccgaa catgttagcc tcctactcct gtactcactg gttgaagttg
      481 attgcctcag gtgacgtggt agatgcggtg aaaacggcgg ccaagatgac tgagcacttc
      541 gcgactgctc gacttgcttg ccgctgtgag gtcgtcgatg gtcatctcgg gcccgacaag
      601 ggtggccatc ttgccagggc gcacggccgt cgggtctgat acgtcggtta catcgatggc
      661 gagaagatcc atcgacggct gccctacgac caggcaccgc aagccaccga cgattgcctg
      721 caacctgttg tcgaaagctc gcggatagcc atccgcgtat ccggtcgaga ccaacgccag
      781 tcgcgtcggc cgctttgcca cccacccagc gctatcggcg atagtttccc cgcgcgacaa
      841 gctgagaacc tggacgatgc gagcacgcag ttcgatcact gggagcatcg ggttgtcagc
      901 gtctggggta gggttgacac cgtaaagcgc cgcgcccgct cgaatgagat cgaagtgtgc
      961 gttcggcaca gaaaagatgt cggacgaatt ggctagtgac gccggaatcc cgtggtagag
     1021 ccgacgcagt tcgcgaaaca ggctgatttg atagtcgctt gaagtgcggg tgggtttgtc
     1081 gaagttgtcg agacggctca tcagcagtgt gatgccatgg tcgcgagcgc tgggcgcaaa
     1141 cgcggctgct tcttccatcg aaaaaccgag tctactttcg ccggtgtcga cgtgcagcgc
     1201 gcaaccgccc gcccatcgat gcgatctggc aagctggtcc cattcggcca tttcgatgga
     1261 gctataaatg accggcctcg catccacttc tgcgaaggcc tgccggggcc ccgaatacag
     1321 cccgcggagc acgtaaatcg ccgcgcccgg ggcaacagcc cgaacgcgtc tggcttccgg
     1381 aatgtcggag acaaaaaagg tcttgcagcc agtcttggcc agcgctcccg cgatcggttc
     1441 gatgccgcag ccataggcat tgcctttgac cacagcggca cattcaaccg cggcgtattt
     1501 cgccagtctt tcccaattgg atacaatggc tgtcagatcg atcctgagaa caccgcaagc
     1561 ttctgcttcc gcaggcccat cgctcgtaat gcacgccgca tgcgctttat tgttaacaac
     1621 gagcctgcca ccccgattga tgatttttcc gtcgaccgaa ccttcaacga cgaccttcgc
     1681 gcctggctcg attgtcaaat tggccagaag atttccgcga atgtgtagga agcagttcct
     1741 ttgaacaacg gtgtcgtcaa tgaccgagcc gtttatgtcc gacgagctga caacgagagg
     1801 cagctcttct gcggctttct gtactgaaag cgtcgcaaga ttcgacacgg tctgaaaacc
     1861 ccccgctgcc cgggcaaatc cttgcgcgtt tccgccctta ccacaaggca aacggtatac
     1921 gatggtgaat cgcaaccggt cggtggtaac gggttccggc tatactggtt gcgcgccaag
     1981 ggcttccgcg ctgccatgcg catccaataa ttggaggttt ggcctttagg ggacgcgctc
     2041 caatgtccgc tttcttgcaa ggcggacatt gccgagggct gtttatttgc ctgcccgacc
     2101 gctcattcgt gtttcggcgg ccgccgccag ttgccgaatt ttatccgtaa caataggcgc
     2161 ccttggcgtg gccagggaca tggcaagctc ccagacaagt ctgaacatgc ccaaaataaa
     2221 tattgggatg gcgatgacga tcgctccaac cacaatgaga ggaacgatga tttgattttt
     2281 catttgccta tcgagccgac tggccacggc tttccatcaa gcgcaagggc gccccggaaa
     2341 caggcgcctc gggagacacg gacgacggct gcgtggccga ctgctgcgct ggctttcggg
     2401 gagcagcggt tcgaggctgg gccggggacg ctaacttctc cctgatgtcc tgctcaatgg
     2461 ccggcaatat cgagatgtct tgcgccatct tttcctgttt tgccgagagc tgctttatgg
     2521 tggcagcaag ctgatcgacg tcttgccgca tggtcgcgag accaagcgcc acgggcctga
     2581 gctgctgcgc caactcagca gacgttacaa ctgcggggac agacgcctga gcctcgagag
     2641 gcgacttgcc ggtggggggc aacaaccagc tcaaggacgg agcccgcgct ctgacaatct
     2701 cttttgcttc gtcccataag actgccacgc caacgtcgct
//
LOCUS       DATDHO010000911         1536 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_392083, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000911 DATDHO010000000
VERSION     DATDHO010000911.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392083"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="VIY07_17930"
     CDS             <1..444
                     /locus_tag="VIY07_17930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383670.1"
                     /translation="AAWINTVGALQGTPMADERLAPELEYIVGKIDMAGRDSITTARS
                     RPRFDSFRIPEHVLVVNYFGIPVSGSISFLARRGFFQLRKHGPSDGVVLLSDTIFPGG
                     VTLAELGSDHFLLGAHLDVTAVALAITVIRWLEQPEHRASSSSRG"
     gene            complement(530..>1536)
                     /locus_tag="VIY07_17935"
     CDS             complement(530..>1536)
                     /locus_tag="VIY07_17935"
                     /inference="COORDINATES: protein motif:HMM:NF012804.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY6383671.1"
                     /translation="LSFYTSFDQGAVRCGVGDPPEKPQVTLKMKAPLLDKLFTGRENG
                     PKAAMSGKLSFIGDTIKAMSLQRIQKDLNRLYGEARAEIRDLDAIFERAAHVVPGQGD
                     PQSPGTLASAARSGEVANAGRVLGDIRDEVVRTVEEMYAHRLITSTGGNVSVRIPGKD
                     EIWLTPNSSFKGALRSDMLGRVDLAGNVIEDSPYAPSSERMLHCAMYRNNSRVGAVIH
                     SHAPKAMILGLAGLPFLPISTEAAFIGEIPRVPFIMPGTAELADAVGVAAKDATAVIM
                     QNHGLIVGGANLREAMDLSLIIEQTADKLIVCQLLGKPPPVLPAEIVSALRSLGEMVV
                     "
BASE COUNT          303 a          459 c          448 g          326 t
ORIGIN      
        1 gcggcatgga tcaacacggt gggtgcgctc caaggcaccc cgatggcgga cgagcggctt
       61 gcgccggagt tagaatatat agtcggtaag atcgacatgg ccggcagaga cagtatcacc
      121 accgcgcgca gccgcccgcg attcgattcc tttcgcatcc ccgaacatgt gctggtggtt
      181 aattatttcg gcatccctgt cagcggcagc atttcctttt tggcccgcag aggttttttt
      241 cagttgcgaa agcatggtcc cagtgatggg gttgtgcttt tgtccgacac gatttttccc
      301 ggcggcgtga ccttggccga gctcggcagc gaccactttc tgctcggcgc gcacctggat
      361 gttaccgcgg tggctctggc gattactgtg atccgctggt tggagcaacc cgagcaccgg
      421 gcatcttcaa gttctcgtgg ctgatgcgga gctttataag cttttgactt tgactgtcat
      481 tctgaacgaa gcgaagaatc tcgtctccct gagataaagc tacgcgcagc tacacgacca
      541 tctcgcccag gctgcgcaag gcgctgacga tctcggcggg caaaaccggc gggggctttc
      601 caagcaattg gcaaacaatg agcttgtccg cggtctgctc gatgatcaag ctcaggtcca
      661 tggcctcacg caagttcgct ccaccgacga tgaggccgtg attctgcatg atcaccgccg
      721 tggcgtcttt ggctgccaca ccgaccgcat cggcaagctc agcggttccg ggcatgataa
      781 acggcacccg cggaatctcg ccgatgaatg cggcctccgt tgaaatcggc aggaagggga
      841 ggcccgccag acccaagatc atcgccttcg gcgcgtgcga gtggatcact gcgcccacgc
      901 gcgagttgtt gcgatacatc gcgcagtgca gcatgcgctc gctcgacggc gcataagggg
      961 aatcctcgat cacatttccg gcaagatcga cgcgccccaa catatcggaa cgaagcgcgc
     1021 ccttgaagga cgaattgggc gtgagccaga tttcgtcttt gcccggaata cgcacgctca
     1081 cgttgccgcc cgtcgaagtg atgagtctgt gcgcgtacat ttcttcgacg gtacgaacaa
     1141 cctcgtcgcg gatgtcaccg agaactcgac ccgcgttggc gacttcgccg ctgcgagcgg
     1201 ccgatgcaag ggtccccgga gactggggat cgccctgccc agggaccacg tgcgcggccc
     1261 tttcaaaaat cgcatcgaga tctctgattt cggctcgggc ctcgccgtag agacgattaa
     1321 gatctttttg aatgcgctgc aaagacatcg ccttgatggt gtcgccaatg aacgatagct
     1381 tgccgctcat cgctgccttc ggaccgttct cacgcccagt gaacagcttg tcgagtagtg
     1441 gggccttcat cttcagcgtg acttgcggct tttccggcgg atcgcccacg ccacaacgaa
     1501 ccgcaccctg atcgaaactc gtatagaagg agaggt
//
LOCUS       DATDHO010000912         8336 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_144900, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000912 DATDHO010000000
VERSION     DATDHO010000912.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 8336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8336
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144900"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..450)
                     /gene="pyrH"
                     /locus_tag="VIY07_17940"
     CDS             complement(<1..450)
                     /gene="pyrH"
                     /locus_tag="VIY07_17940"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455040.1"
                     /note="Catalyzes the phosphorylation of UMP to UDP;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEY6383672.1"
                     /translation="MSSPAYKRVIVKLSGEALAASSGFGIDQATVERLAADLAASAKM
                     GVELGVVVGGGNIFRGVEISERGVPRPVGDTMGMLATVMNCLVLEAAIERTGCEARTL
                     SALAMTVVCETYNRKRAMKNLGKGRVVLLAAGTGNPFFTTDTTAVLRA"
     gene            complement(537..1460)
                     /gene="tsf"
                     /locus_tag="VIY07_17945"
     CDS             complement(537..1460)
                     /gene="tsf"
                     /locus_tag="VIY07_17945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HEY6383673.1"
                     /translation="MASISAQMVKELRESTGAGMMDCKAALTETNGDMTAAQDWLRKK
                     GLSKAAKKAGRVAAEGLIGAQVKGTKGVVVEVNSETDFVARNDLFQGLVKMIADVALS
                     VGADVEMIKSAKAGSITISEAISDTMAKIGENMTLRRAATLSVGKGVIGSYVHSAVTD
                     GLGRIGVLVGLESTGKTDELLALGRLLAMHIAASNPQALDASGLDPALVQREKDVLAD
                     KFKQQGKPANVIEKIVESGLKTFYKEVTLLEQVYVHDDKKSVAQALKEAEAKVGAPIK
                     VTGYVRFALGEGVEKHDSDFAAEVAAAAGQK"
     gene            complement(1581..2579)
                     /locus_tag="VIY07_17950"
     CDS             complement(1581..2579)
                     /locus_tag="VIY07_17950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEY6383674.1"
                     /translation="MALPDFSMRQLLEAGVHFGHQAHRWNPKMGSFIFGTRNNIHIVD
                     LAQTVPMLHRALQAVSDTVAKGGRILFVGTKRQAQDSIADAAKRSAQYYVNSRWLGGT
                     LTNWKTISASIARLRKLDEMLSSGEAAGYTKKERLTMQRERDKLDRSLGGIKDMGGVP
                     DLLFVIDTNKEDIAIKEAQRLNIPVAAIVDTNCDPAGITYVVPGNDDASRAVSLYCDL
                     VAKAAIDGISRAQGEMGIDIGAAEKPVVDQVPSGPAAGDLGFEQLPGPRGVADDLKKL
                     PGVSPAIEKQLNDLGIFHYSQIAELNEKAAHNVGEEVGLPGRVESWIAKAKELTAE"
     gene            complement(2767..3552)
                     /locus_tag="VIY07_17955"
     CDS             complement(2767..3552)
                     /locus_tag="VIY07_17955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6383675.1"
                     /translation="MNITIKPSGFSAALRVMPQPYAHSIPDIECAQFTVFIVDDDPGV
                     LKSLARFVRAAGYAVQTFSSADELLAHGVDVPGCVVTDLLMPGIDGRQLQAALCKADD
                     RSIIFISGTTDAPTIVDAMKAGAIDFLIKPVDGNALLAALTVAIERQKKLHQKQVELA
                     AIKERLAQLTPREAEVLRHVIAGRLNKQIAWTLGTVEKTIKVHRGRIMEKMAVRSIAE
                     LVRLTEQIGIAPCEEEDGQTGEALIGDIGSRAGRPGGGALQIA"
     gene            complement(3729..4082)
                     /locus_tag="VIY07_17960"
     CDS             complement(3729..4082)
                     /locus_tag="VIY07_17960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6383676.1"
                     /translation="MIAIVDDDESFRRATTSFVRSLGYGTAAFDSAEAFLKSDRFPDT
                     DCVITDVQMPGMTGIELQGRLIAEGHRVPVIFITAFPEMRARAQALAAGAIGFLAKPF
                     NDQNLITCLNEALAR"
     gene            complement(4214..4852)
                     /locus_tag="VIY07_17965"
     CDS             complement(4214..4852)
                     /locus_tag="VIY07_17965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY6383677.1"
                     /translation="MKTEPSNAVPVVFLVDDDASLRGAVSNLIRSVGLRVEAFASTAE
                     FFAAKRPDAACCLVLDVRLPGVSGLDFQVELARAKIQIPIIFITGHGDIPMTVKAMKA
                     GAVEFLTKPFRDQDLLDAIQIALERSRANYASEKAISELRAKFDTLTPREQEVMAWVT
                     GGLLNKQVAAEIGVTEITVKVHRGKVTKKMGAKSLADLVKMADILGIRRTKT"
     gene            complement(4878..6890)
                     /locus_tag="VIY07_17970"
     CDS             complement(4878..6890)
                     /locus_tag="VIY07_17970"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEY6383678.1"
                     /translation="MFKSAVMQKSAKATHLGAKDASSAGEMGNFSRLQKQNRQLYERL
                     PELQLIYDTAPVGLAFLTLDCRYVQINQRLTEICGISVADHIGRSVRDTVPAVADQVE
                     QVVNAIVRTGEPITGIEVRGQKADKSNADHVWITNWHPLKTPEGKIVGINVVAEDITE
                     RKRAEAVLAASEHALRESEARFRELADNISQFAWTADTEGRRYWYNKRWYDYSGTTLE
                     EMRGFGWKKLHHPDHLERVFRHIQESFKNDEPWEDTFPLRGRDGNFRWFLSRAQPIRD
                     ETGKVVRWFGTNTDITDQLEAEKALRELNETLEERVKAETHERLQIWNVSQDLLLVAG
                     LDGKYLSVNPAWTSVLGWSEQELLGKDSYWLVHPEDREKIRAEAKQLAAGEMTQRFEI
                     RFRHQNGTYRWLLWKAVQDQSCIYAMAADVTELKDAEEKLRHARQELTQVARRVSLAT
                     MSAAIAHEIRQPLGAIVTNANAGLRWLDRPQPDLGEVRDSLRHIVGDGHRASEVIQSV
                     RAMFTKGEHPGTLLDANDLIRETIAMATGDLGASRVVVDFELAEKLPLITAHKGQLQQ
                     VILNIVTNAIDSMRSIDDRVRMLRVRSRPFDSSGVAVSVQDSGAGIDPQNADRIFDAF
                     FSTKTNGMGMGLAICRSIVEAHGGRLSVSAGVPHGSVFHIVLPGVQ"
     gene            7110..7835
                     /locus_tag="VIY07_17975"
     CDS             7110..7835
                     /locus_tag="VIY07_17975"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6383679.1"
                     /translation="MIRTLAITCFAAGALAGGVFNTESAFAEPLSFASPFSRTNLIFA
                     PAMREPRDEDESSAQIPARLHRNVVAYSTREAPGTIVIDTPNTYLYYVLGGGKAIRYG
                     IGVGREGFTWSGVKAIERKAEWPDWIPPAEMLQRQPYLPRFMAGGPGNPLGARAMYIG
                     GTVYRIHGTNAPSTIGRQVSSGCIRMLNEDVVDLYARVNVGTKVVVLPMHPGRVQTVA
                     SQNESTQRARSAVANVPRIHGVY"
     gene            7863..8051
                     /locus_tag="VIY07_17980"
     CDS             7863..8051
                     /locus_tag="VIY07_17980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383680.1"
                     /translation="MHSSLWSAGRNTHLKIVAVSLMASIVVVMIGANARHDSGPNQVV
                     VKAGQPVVYTDNAGATIR"
BASE COUNT         1683 a         2563 c         2280 g         1810 t
ORIGIN      
        1 ggctcgcagc accgcggtcg tatcagtcgt aaaaaaggga ttgccggtgc ccgcggcaag
       61 cagcacgacg cgacctttgc cgaggttctt catggctcgc ttgcggttat aagtctcgca
      121 tacaaccgtc attgcaagcg ccgacaatgt gcgcgcctcg catccggtcc tctcgatcgc
      181 agcctcgagc acgaggcaat tcattacggt cgcgagcatg cccattgtat caccgacagg
      241 gcgtggaacg ccgcgctccg atatctcgac accacggaag atattgccgc cgccgaccac
      301 gaccccaagc tcaactccca tcttggcgct cgccgcaaga tctgcggcca gacgctcaac
      361 ggttgcctgg tcgatgccaa agccgctcga agccgccagg gcttcgcccg acagtttgac
      421 aatgacgcgc ttgtaagcgg gactgctcat gatccgcgat ccttaggtcg agcgaatccg
      481 actcgaaaat gcaagaccac tatagcgaaa gggcggcccg agagccgccc cgcgcatcac
      541 ttttgcccag ccgcagccgc gacttccgcg gcgaagtcgc tgtcgtgctt ctcgacgccc
      601 tcgcccagcg cgaagcgaac atagccggtg accttgattg gcgcaccgac tttcgcttcc
      661 gcttccttca gcgcctgcgc cacgctcttc ttgtcgtcgt ggacatagac ctgttcgagc
      721 aaggtcactt ccttatagaa ggtcttaagg ccagactcga cgatcttctc gatcacgttg
      781 gccggcttgc cctgttgctt gaacttgtcg gccagtacat ccttctcgcg ctgcaccagc
      841 gccggatcca gaccggatgc atcaagcgcc tgcgggttcg acgccgcgat atgcatggca
      901 agcagccgac caagcgccaa gagttcatct gtcttgcccg tcgattccag acctaccaga
      961 acgccgatgc ggccgagacc gtcggttacg gcactgtgta catacgaacc gatcacgccc
     1021 ttgccgaccg aaagcgtggc ggcgcgacgc agcgtcatgt tctcgccgat cttcgccatg
     1081 gtgtcggaga tagcctccga aatcgtgatg ctgcccgctt tcgctgactt gatcatctcg
     1141 acatcggcgc cgacggagag agcgacatcg gcgatcatct tcaccagacc ctggaacaga
     1201 tcgttgcgcg caacgaaatc ggtttccgag ttgacttcga cgaccacgcc ttttgtgccc
     1261 ttcacctgcg cgccaatgag gccctcggcc gcgacccggc cggccttctt cgcggccttg
     1321 gagaggcctt tcttgcgcag ccaatcctgg gccgcagtca tgtcgccatt ggtctcggtc
     1381 agtgcggcct tgcagtccat catgccggcg ccggtcgact cgcgcagctc cttcaccatc
     1441 tgagcgctga tacttgccat catccgtttc cttgatccgt cacggcccgg cttgtgtccg
     1501 ggccgtccac gtctatagac cctgcatggc tgctaaggcg tggatacccg acctcaaagc
     1561 cggacatgac aacgttgcat ttattctgcc gtcaattcct tggccttggc gatccagctc
     1621 tcgacgcgcc ccggaagccc gacctcttcg ccaacattgt gggcggcctt ttcgttgagt
     1681 tcggcaatct gcgaataatg aaaaatgccg aggtcgttaa gctgcttttc gattgccggg
     1741 gaaacacccg gcagcttttt gaggtcgtcg gcaaccccgc gcggcccggg cagctgctcg
     1801 aaaccaaggt cgccggcggc cgggccgctc gggacctgat ccaccacagg cttttctgcg
     1861 gcgccgatat caatgcccat ttcgccttgc gcccgtgaaa ttccatcgat cgccgccttc
     1921 gctacgagat cgcaatagag cgagacagcg cggctcgcat cgtcgttgcc gggcacaacg
     1981 taagttatgc cggccggatc gcaattggta tcgacgatcg ccgcgaccgg aatattgagt
     2041 cgctgcgcct ccttgattgc gatgtcttcc ttgttggtgt cgatcacgaa caagagatcg
     2101 ggcacgccgc ccatgtcctt gatcccgccg agcgagcgat cgagcttgtc gcgctctcgc
     2161 tgcatggtga gacgctcttt cttcgtataa cccgcagcct cacccgaact gagcatttcg
     2221 tcgagcttgc gcagccgcgc gattgaagcc gagattgttt tccagttcgt caacgtgccg
     2281 ccgagccagc gcgagttcac gtaatactgg gcgctgcgtt tggccgcgtc agcgattgag
     2341 tcctgcgcct gccgcttcgt gcctacgaag aggatgcggc cgcctttggc gacggtgtcg
     2401 ctgaccgcct gcaacgcgcg atgaagcatc ggcacggtct gcgccaggtc gacgatgtgg
     2461 atgttgttac gggttccgaa gatgaatgag cccatcttcg ggttccaacg gtgggcctga
     2521 tggccgaagt gaacgccagc ttcgagcagc tggcgcatcg aaaagtcagg aagcgccata
     2581 gttttctccg gttgatccgc cgcggacggt tgtgagccca atggggccac cggacggcgt
     2641 ttttgaccca ttgtcggggc ctaacgcctg cgtccgcgtg agtgatgctg gggcttatat
     2701 agttgcgaat tccggaatgc aaggcgggac aaggccttag tccttcagcc gccttggctg
     2761 ctcccgctag gcaatttgga gcgcaccgcc gccgggacgg ccggcccgcg aaccaatgtc
     2821 tccaatcagc gcctcaccgg tctggccatc ttcctcttca caaggcgcta ttccgatctg
     2881 ttccgtcaaa cgcaccagct cggcgatcga tcgaaccgcc attttttcca tgatacgacc
     2941 acggtgcacc ttgatcgtct tttcaaccgt gccaagggtc cacgcaatct gcttgttgag
     3001 acggccggct atgacgtgcc tgagcacttc agcttcgcgc ggagtcagct gagccagtct
     3061 ctccttgatg gcggccagct cgacctgctt ttgatgcagt tttttctgac gctcgatggc
     3121 aacagtcaga gccgccagca atgcgttgcc gtcaacgggc ttaatcagga aatcaatcgc
     3181 gcccgctttc attgcatcga cgatcgttgg cgcatcggtc gtacccgaaa tgaaaataat
     3241 cgaccgatca tctgctttgc aaagcgctgc ctgcaactgg cggccgtcga tgccaggcat
     3301 cagcaagtcg gtaacaacac atcccggcac atcaaccccg tgcgcaagca attcgtcggc
     3361 cgatgagaag gtctgcactg cgtatcccgc agcacggaca aagcgcgcca aagacttcag
     3421 cacgcccgga tcgtcgtcga cgatgaatac tgtgaattgc gcgcattcga tatcaggaat
     3481 tgaatgcgca tagggttgcg gcataacgcg tagcgccgca gaaaagcctg acggcttgat
     3541 cgtgatgttc atcgtctccc cgcactcaca aagtgaacaa cttgtttttc ttgttgcgga
     3601 aagactagga cggccctgtg aatgccctcc attacacagt agtagttgtg acttatacct
     3661 tggtttgagg tatgcgctcg cgggggccag cctctatttt aggcaataga cctgccattg
     3721 cgctcagcct agcgagccag agcctcgttc aggcaagtta tcaggttctg gtcgttaaac
     3781 ggcttagcca aaaatccgat cgcgccggcc gccaaagcct gcgcacgagc cctcatctcg
     3841 ggaaacgcag taatgaaaat aacggggacg cggtgtcctt cggcaatgag ccggccctgc
     3901 agctctattc ccgtcatgcc cggcatctgc acgtcggtaa tcacgcaatc ggtgtcgggg
     3961 aaacgatccg atttcaggaa agcttccgcg gagtcgaatg cggccgtccc atagccaagc
     4021 gagcgcacaa aactggtagt agcgcggcgg aacgattcat catcatcaac aatggcgatc
     4081 acgggtacct tcggcaacgt tggattcctc tgtcgatgaa acaaatatga cttcggacca
     4141 ctgcacgcac gattccgaag gtaacgttta actatcggaa agagatgagg aattacacca
     4201 aggtatagtt tccctaggtt tttgttcggc gaatccccaa aatatccgcc attttgacaa
     4261 gatccgccaa agattttgcc cccatttttt tcgtgacttt acctcgatgc accttgaccg
     4321 tgatctcggt tacaccgatt tcggcggcca cctgtttgtt caaaagaccc ccggtcaccc
     4381 acgccatgac ctcttgctcg cgtggcgtca gcgtgtcgaa ttttgccctc agttcagata
     4441 tggccttctc gcttgcataa ttggcgcggg accgttcaag cgcgatctgg atagcatcga
     4501 gaagatcctg gtcgcgaaac ggcttggtca ggaactcgac tgcgccggcc ttcatggcct
     4561 tcaccgtcat cgggatatcg ccgtgaccgg taatgaaaat aatcggaatc tggatcttgg
     4621 cccttgccag ttccacctgg aagtcgaggc cactcacacc cggcaacctg acatcgagaa
     4681 caaggcagca ggcagcatcc ggtcgcttcg ctgcaaagaa ctctgccgtc gacgcaaatg
     4741 cttcgacccg cagtcctacc gaccggatca gattgctcac cgcgccacgc aatgaagcat
     4801 cgtcgtccac gagaaagaca accggcaccg cattggaagg ctcggttttc atgtaagaac
     4861 cgtttgaaag ctcaggatca ttgcacgcca ggcaagacga tgtgaaatac cgacccgtgc
     4921 ggcacacccg ccgacaccga caaacgtccg ccatgagctt cgacaattga tcggcatatt
     4981 gccaagccca tccccatccc attggttttc gtggagaaaa aggcgtcgaa gatgcggtcc
     5041 gcgttttgcg gatcaatacc cgctccggaa tcctgaactg acaccgcgac tccgctcgaa
     5101 tcgaacggcc tcgatctcac gcgcagcatt cgcacccgat catcaatgct acgcattgaa
     5161 tcaatggcgt tggtgacaat attcaggata acctgctgaa gctgaccttt gtgcgccgtg
     5221 atcagaggca gcttttcggc cagctcgaaa tcaacaacaa cccggctcgc gccgaggtcg
     5281 ccggttgcca tcgcaatggt ttctcggatc aggtcgttcg catcaagcag ggttccagga
     5341 tgctcgcctt tggtgaacat ggcccggact gattggatca cctcgcttgc cctatggccg
     5401 tctcctacga tgtgcctgag actgtcgcgc acttcaccaa ggtcgggctg tggcctgtcg
     5461 agccatcgca gacccgcatt ggcattcgtc acgatcgctc cgagcggctg tctgatttca
     5521 tgcgcaatcg cagccgacat cgtcgccaaa ctcacgcggc gggcaacttg cgtaagttcc
     5581 tgccgcgcat gtctcagttt ctcctctgca tccttgagct cggtgacgtc ggccgccatg
     5641 gcatagatgc agctctggtc ctgaacggcc ttccacaaaa gccaacggta agtaccgttc
     5701 tggtgacgga agcgaatctc aaaacgctgg gtcatctcgc ctgcggcgag ttgcttggcc
     5761 tccgcgcgga tcttttcgcg gtcttccgga tggaccagcc aatacgaatc cttgccgagc
     5821 agctcttgtt ccgaccagcc aagcactgag gtccaggccg gattgacgct gagatatttg
     5881 ccatccagac ccgcgaccaa cagcaggtcc tgtgacacat tccatatctg cagccgttca
     5941 tgcgtctcgg ctttgacccg ctcctccaaa gtctcattga gttcgcgtag cgctttctca
     6001 gcttcgagct ggtccgtgat gtcagtgttc gtgccaaacc agcgaacaac tttgccggtt
     6061 tcgtcgcgga tcggctgagc gcgcgagagg aaccagcgga agtttccgtc acgcccccgc
     6121 aacgggaacg tgtcctccca aggctcgtcg ttcttgaagc tttcctggat gtgccggaat
     6181 acgcgttcga gatgatcggg atgatgcaat ttcttccagc caaagccccg catctcttca
     6241 agcgtggtgc cggaatagtc ataccaccgc ttgttgtacc aatatcgcct gccttccgtg
     6301 tcggccgtcc aggcaaattg gctgatgttg tcggcgagtt cgcgaaatcg cgcttcgctt
     6361 tcccgcaacg catgctcgct cgcagcgagc acggcttcag cacgcttgcg ctcggttata
     6421 tcttccgcga cgacgtttat accgacaatt tttccctccg gcgtcttcag gggatgccag
     6481 ttcgttatcc agacgtggtc ggcgttgctt ttgtcggctt tctgcccgcg aacctcgatg
     6541 ccggtaatcg gctcgccggt tcgcacgatg gcgttgacga cctgttcgac ctggtccgca
     6601 accgccggaa cggtatcgcg aaccgatcgg ccaatgtggt ccgctaccga aataccgcag
     6661 atttccgtca gtcgttgatt gatctgaaca taccggcagt cgagcgtgag aaacgcgagc
     6721 ccgaccgggg ccgtgtcata gatcaactga agctcgggca gccgctcata gagctgtcta
     6781 ttctgctttt gcagcctgga aaaattgccc atctcgccgg cagacgaggc gtccttcgca
     6841 ccgagatgcg ttgcctttgc cgatttttgc atcaccgctg acttgaacac tgacttggca
     6901 tccgagacga atcgtacatg acaatcgcct gcattggaac aaagactcgg atcaacgatg
     6961 attgatgcgt atgacagttc gataccttcg tataggcgcg ctcgtctttt cgatatgcgc
     7021 cattaaccag cgtacagtgg cctaagctgg catcagcgcc ctacgcttcc tgcaacaaga
     7081 acagccgaca ttactgcggg gagcccacaa tgatcaggac actggcgatc acctgctttg
     7141 cggccggggc attggccggc ggcgtattca acactgaatc tgccttcgca gaaccgctca
     7201 gcttcgcttc gccgttcagc cgtaccaatt tgattttcgc gccggccatg cgcgaaccga
     7261 gggatgagga tgaatcatcc gctcagatcc cggcacggtt gcaccgtaat gttgtggctt
     7321 attcgacgcg cgaagcgccg ggcacgatcg ttatcgatac gcccaacact tatctctact
     7381 acgtgctcgg tggcggcaaa gcgatccgct atgggattgg cgtcgggcgc gaaggtttca
     7441 cctggtccgg cgtgaaggcg atcgagcgca aggcggaatg gcccgactgg attccgccag
     7501 cggagatgct gcagcgccag ccttatcttc cgcgcttcat ggcgggcggt cccggcaatc
     7561 cactcggtgc gcgcgccatg tacatcggcg gcaccgttta tcggatccac ggaacgaatg
     7621 ctccctcgac catcggcaga caagtgtcga gcggatgcat ccggatgctc aatgaagatg
     7681 tcgtcgatct ttatgcgcgc gtgaacgttg ggacaaaggt cgttgtcctg ccgatgcatc
     7741 cgggccgcgt gcagacagtg gcaagtcaga atgaatcaac tcaacgggcg cgaagcgcgg
     7801 ttgccaacgt accgcgtata cacggggtct attgaaccaa aatcgatatg cagaggcgca
     7861 ccatgcacag ctcactctgg tccgcgggcc gcaacaccca cctcaagatc gtagcagttt
     7921 cactgatggc ctcgattgtc gtggtcatga tcggtgccaa tgcgcggcat gacagcggac
     7981 caaatcaagt ggtggtcaaa gccggacagc ccgttgtcta cacggacaac gcgggcgcca
     8041 cgattcgctg aacggaactg gcacttgagc cgcacgtggg aactcgcgat gcgaaccgcg
     8101 ggattttcca cgcgttagtt cttcatgaac agtggggcgg cgccatggag catgccaatg
     8161 gccacatatc cgcttccagc acagcatgat cgacgcacaa gtgaactgca tccgctcatc
     8221 taccaggcca tgatcgggct gacgatctgg ttcgtgttat ccgtctgggt ccttttcagc
     8281 cgcggagcct acgaaggtgt cacgctgtcg gtaatcacgc tgtttttcgt cgtcct
//
LOCUS       DATDHO010000913         5533 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_91697, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000913 DATDHO010000000
VERSION     DATDHO010000913.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5533
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_91697"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..1071)
                     /locus_tag="VIY07_17985"
     CDS             complement(103..1071)
                     /locus_tag="VIY07_17985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6383681.1"
                     /translation="MPTLLSRFIAAAMLLAGLVATAFAQDYPNRPVRLIVPFPPGGSN
                     DVVARLVAMQLSTQLGQQVFVDNRGGAGGVIGTEACATAAPDGYTLCIISIAHAVNPA
                     LHKLNYDPIKSFAPISIFATGPNVLAINPTLPVNSVKELVALAKQKPGELNYASAGVG
                     SFQHLGGELFKLTAGVNIVHVPYKGGGPAMQDVISGHVKIMFSSLIQTTPFIKSGQLK
                     ALGTGGAKRTSVLPDVPTISEAGVPGYVADNWWGLAAPAGLPGPLVEKLYAASQAALK
                     SPELLAAFEREGAAPVTMTTAEFGDYIKDEIAKWGRVVKEGNIQSQ"
     gene            complement(1088..1879)
                     /locus_tag="VIY07_17990"
     CDS             complement(1088..1879)
                     /locus_tag="VIY07_17990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEY6383682.1"
                     /translation="MNYSTDFPTIKDRVSPQEWQARLDLAACYRLIDVYDMTDLIYNH
                     ITARVPGEEDLLLLNLYGLLYKEITASSLVKIHVDGEIIWKPDTDYDINKSGYVIHGA
                     IHKARPDVACVLHTHTRAGMAVAAMKCGLLPLSQTSVRFVGHIGYHDYEGPAVELDER
                     ERLVRDLGPHDAMIMRNHGLLTCGATIQQAFNTMYQLELSCRSQVDAMAARTELTMPG
                     ENVLAHTAHLYQPGTRRPYGILEWPAMLRRLEAEQKNSNYPPYWH"
     gene            2032..3075
                     /locus_tag="VIY07_17995"
     CDS             2032..3075
                     /locus_tag="VIY07_17995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEY6383683.1"
                     /translation="MPAPESASKIPVTVLTGYLGAGKTTLLNRILSEPHGKKFAVIVN
                     EFGEIGIDNDLVVNADEEVFEMNNGCICCTVRGDLVRIIDGLMRRKGKFDAIIVETTG
                     LADPAPVAQTFFMDEAVGSKTKLDAVVTVADAKWLTDRLKDAPEAKNQIAFADVILIN
                     KTDLVAPDELRELEARIRALNPYARLHRTERANIDINEVLGRNAFDLDRILEIEPSFL
                     DADEHHHDHDHDHGHDHGHHHHGNGLKHYHDEEMQSVSLKTDRPLNPDKFFPWIQDLV
                     AKDGPNILRCKGILSFKDDPERFVFQGVHMILDGDHQRPWRADENRDSRIVFIGRNLP
                     EDRIREGFENCIA"
     gene            3077..4069
                     /locus_tag="VIY07_18000"
     CDS             3077..4069
                     /locus_tag="VIY07_18000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HEY6383684.1"
                     /translation="MSDIQAPLPSLADRVRRVDVDATIVGVHFLGGTPVFVLGEEALL
                     YAGERRIGIHAGAILSSASDGTRIVTGGDDGKLFETDADGQRELASDDKRRWIDHVTL
                     GPEGAVAWSAAKTVQVLTRKGDERCFDAPSTVAGLCFAPKGFRLAIAHYNGATLWFPN
                     AAGAPPERLEWKGSHLGVTISPDGRFLITCMQEPMLHGWRLADSKHMRMSGYSARVRS
                     LSWSADGEHLATSGSEQLILWPFDGKDGPMGRQPKILARAETRVTVVNCHPRHPVVAV
                     GYADGTVKLVRIDDDALILVRESDGSPVSALGWDAAGQMLAFGTESGAGGILTL"
     gene            4207..>5533
                     /locus_tag="VIY07_18005"
     CDS             4207..>5533
                     /locus_tag="VIY07_18005"
                     /inference="COORDINATES: protein motif:HMM:NF042645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6600 domain-containing protein"
                     /protein_id="HEY6383685.1"
                     /translation="MTFIHRVRRAAVAMLTGAVVVFGVLSTPIVVAALTPAAAQISED
                     AQIALEQYGSWRPHPRFGNVWVPHRVPPDWRPYENGQWVYTDEWGWYWVSDDVEANWG
                     WVVYHYGRWAFEPGIGWFWVPGDEWAPAWVNWRYGDEYVGWAPLPPDELVESYQVQPA
                     FWMFVPGRYMAAPRVRTYIVPVYRRTVLLRGTRVVNRTVFVHGARLAVNPGISPAYIA
                     RVSGAPVATYSVRPRVFAATQGVTGAVQVRRDELRAPGGRRGPAGPGALPGAGPPRLG
                     AISVQRTNTVIQPSAAATAPQPLGKNEPGQLGTHPPRAAQGPAPSTSTPPASPQQSGA
                     PSPPSASQRQTPSVQQTAPKRPPPPGQVPSAGLPNTAPPANAAPLRQEHRERPPPGGP
                     PSQPNIVRPIPSQVPPGTPQRQVQPSPQVAPSPQRQVQPPPQPAPPLQRQ"
BASE COUNT         1038 a         1740 c         1709 g         1046 t
ORIGIN      
        1 aagcgaaggt aaagtccgca aatatccgcc caattggcga aaacgtcagg cgctaaaaca
       61 gcttatctcg gccgtcggca gcgccttgcc ggtttccggg cgctattgcg actggatgtt
      121 gccctctttg acaacccgac cccacttggc gatttcatcc tttatgtagt cgccaaactc
      181 ggcggtcgtc atcgtcacgg gcgcggcgcc ctcgcgttca aacgccgcca acaattcggg
      241 cgacttcagt gcagcctggc tcgcagcgta taatttttcg acgagcggtc ccggcaggcc
      301 ggctggagcg gccaaacccc accagttgtc ggccacataa ccgggaaccc cggcctccga
      361 gattgtcggc acgtcaggaa gaaccgaagt gcgcttggcg ccgcctgttc ccagcgcctt
      421 gagctgtccc gatttgataa acggcgtggt ctggatgaga gacgagaaca tgattttcac
      481 gtgcccgctg atcacgtcct gcatcgctgg cccgccaccc ttgtacggga cgtgcacaat
      541 gttgacccca gccgtgagct tgaacagttc tccgcccaga tgctgaaagc tgccgactcc
      601 cgccgacgcg tagttgagct cgccgggctt ctgctttgcg agcgcaacca gctccttgac
      661 tgagttgacc gggagcgtcg ggttgatcgc gagcacattc ggcccggtgg caaaaattga
      721 aatcggcgcg aatgatttga tgggatcgta gttgagcttg tgcagcgccg ggttgaccgc
      781 gtgagcgatc gatatgatgc acagcgtgta cccgtcgggc gccgcagttg cgcaggcctc
      841 cgtgccgatg acaccgcctg cacccccgcg gttgtccacg aacacctgct ggccaagttg
      901 cgtgcttaac tgcatggcga ccagccgagc caccacgtca ttgctgcccc ctggcgggaa
      961 agggacaatc aagcgcaccg gccggttcgg ataatcctga gcgaaggcgg tcgctacaag
     1021 cccagcaagc agcatcgcag ccgcaatgaa tcgagacaac aacgtcggca tgatgcctcc
     1081 cggagcttca gtgccaatag gggggatagt tcgagttctt ctgttccgcc tcgagccgac
     1141 gcagcatggc cggccattcg agaatgccgt aaggccgccg cgtgccgggc tggtacaggt
     1201 gagctgtgtg cgccagcacg ttttcgccgg gcatggtgag ctctgtgcgc gcggccatcg
     1261 catcaacttg cgaccggcac gagagttcga gctgatacat cgtattgaat gcctgctgaa
     1321 tcgtggcccc gcacgtgagc aagccgtggt tgcgcatgat cattgcgtcg tgagggccga
     1381 ggtcgcgcac aagcctctct cgctcgtcaa gctcgactgc gggtccttcg tagtcgtggt
     1441 agccgatgtg gccgacgaac cggaccgacg tctgcgacaa tggcagcagg ccgcatttca
     1501 tcgctgcaac cgccattccg gcgcgggtgt gcgtatgcaa cacgcaggcc acgtccggcc
     1561 gtgccttatg gatcgcgccg tgaatcacgt agcccgattt attgatgtcg tagtcggtgt
     1621 cgggcttcca gatgatctcg ccgtcgacgt ggatctttac caggctggaa gcggtgattt
     1681 ccttgtagag gaggccgtag agattgagca gaagcaaatc ttcctcgccc ggaacgcgcg
     1741 cggtgatgtg gttataaatg agatcggtca tgtcgtagac atctatgagg cgataacagg
     1801 cggcgagatc gagccgcgcc tgccactcct gcggcgaaac tcggtccttg atcgtcggga
     1861 aatcggtcga ataattcatg gcgttgtcct tttccgccgg gcgttgaccc gccctggcga
     1921 gcttgtccgc aacataacca cggcgatgga agcgagccaa ggccgacgca gccctttgta
     1981 cttgcgatca agattgccta tatctccgcg accacggaga accagcctct aatgcctgcc
     2041 cctgagtccg cttccaaaat tcccgtcacc gtactgaccg gctacctcgg agccggcaaa
     2101 acgacgttgc taaaccgcat cttgtcggaa ccgcacggca agaaattcgc ggtcatcgtc
     2161 aatgaattcg gcgagatcgg catcgacaac gaccttgtgg tgaatgccga cgaggaagta
     2221 ttcgaaatga acaatggctg catctgctgc accgtgcggg gcgatctggt gcgaatcatt
     2281 gacggtctga tgcgccgcaa gggcaagttc gacgccatca tcgtcgaaac caccggcctg
     2341 gcggacccgg ctccagtcgc gcagaccttt ttcatggacg aggccgtcgg ttcgaaaacg
     2401 aaactggatg ccgtcgtcac tgtcgccgat gccaagtggc tgacggatcg gctcaaggac
     2461 gcgcccgagg ccaaaaacca gattgccttc gcggatgtca tcctgatcaa caagaccgat
     2521 ctggtggcgc cggacgaatt gcgcgagctc gaggcacgca ttcgcgcgct taatccttac
     2581 gctcgattgc accggaccga gcgcgcgaac atcgacatca acgaggtgct cggacgcaat
     2641 gccttcgacc tcgatcggat cctcgagatc gaaccctcct tcctggatgc cgacgagcat
     2701 catcacgatc acgaccacga ccatggccat gatcatggtc atcaccatca tggtaacggg
     2761 cttaagcatt accacgacga ggaaatgcaa tcggtttcgt tgaagaccga caggccactc
     2821 aatcccgaca agttctttcc ctggattcag gatctggttg ccaaggacgg acccaatatc
     2881 ctccgctgca aaggcattct ctcgttcaag gacgatcccg agcggttcgt gtttcagggt
     2941 gtgcacatga tcctcgatgg cgatcaccag cgaccgtggc gcgccgacga gaatcgggac
     3001 agtcgtatcg ttttcatcgg ccgcaatctg cccgaagaca ggattcgaga gggctttgag
     3061 aactgcatcg cctgacgtga gcgacatcca ggcacccctt ccttcactgg ccgaccgcgt
     3121 tcgccgcgtg gacgtggacg cgacgatcgt cggcgtgcac tttcttggcg gcacgcctgt
     3181 ctttgtgttg ggtgaggaag ccttgttgta tgccggcgaa cgtcgcattg gcatccacgc
     3241 cggcgctatt ttgtccagcg catccgacgg aacgcgcatc gtcacaggcg gcgacgatgg
     3301 caagctcttc gaaaccgatg ccgacggaca gcgagagctt gcgtcggacg acaagcggcg
     3361 ctggatcgat cacgtcacgc tcggccctga aggcgcggtg gcatggtcgg ccgccaagac
     3421 cgtccaggtg cttaccagga aaggcgacga acgctgcttt gacgcgccct caacggtggc
     3481 cggcctgtgc tttgcaccga aggggtttcg tctggcgatt gcgcactaca acggcgcgac
     3541 actctggttt cccaacgccg ccggtgcgcc gcccgagcgc ctcgaatgga agggctcgca
     3601 ccttggcgtt acgatcagcc cggacggcag attcctgatc acctgcatgc aggagccgat
     3661 gttgcacggc tggcgactgg cggatagcaa gcacatgcgc atgtcgggct attcggcgcg
     3721 cgttcgttcc ctcagctgga gcgccgacgg cgaacatctc gcaacgtcgg gatccgagca
     3781 gctcatcctg tggccgttcg acggcaagga tggcccgatg ggacgccagc caaagatact
     3841 cgcgcgtgcc gaaacccgcg tgaccgtcgt caactgtcat ccgcgccatc cggtcgtggc
     3901 ggtcggctac gccgatggca cggtgaaact tgtgcgtatc gacgatgatg cgctgattct
     3961 cgtgcgggaa agcgatggaa gcccggttag cgcgcttggc tgggacgcgg ccggtcaaat
     4021 gcttgctttt ggcaccgaat ccggtgccgg aggaatcctc accctctgat cccgcgttgc
     4081 gcaatcactg tgacgcattg cgcgcattcg ggaagcggca ctagcgtata aggcatcgat
     4141 tcggaaccaa cctcacgcgc cgcacttatc tgccttgcgg ccgggcaggt cggagaggga
     4201 aggatcatga ccttcatcca tcgggtacgt cgcgcggcgg tcgcaatgct gaccggcgcc
     4261 gtcgtcgttt tcggcgtgct ctcgacaccg atcgtcgttg ccgccttgac gccggccgcc
     4321 gcgcagattt cagaggacgc tcagatcgcc cttgagcaat acggcagctg gcgcccgcat
     4381 ccacgcttcg gcaacgtctg ggtgcctcac cgggtgccac cagactggcg tccatatgag
     4441 aacggacagt gggtctacac cgatgaatgg ggttggtatt gggtctccga cgacgtcgag
     4501 gccaattggg gttgggttgt ctatcactat gggcgttggg cattcgaacc tggaattggc
     4561 tggttctggg tgccgggcga tgaatgggcg ccggcctggg tgaactggcg atatggcgac
     4621 gaatatgtcg gctgggcgcc cttgccgccc gacgaactgg tcgagtccta tcaagtccag
     4681 cccgctttct ggatgttcgt gccggggcgc tatatggcgg cgccgcgggt gcgcacgtac
     4741 atcgtgcccg tgtatcggcg cacagtcctt ttgcgcggaa cccgcgttgt caatcgcacc
     4801 gtttttgttc acggggcgcg cctcgcggtt aatcctggaa tttcgcccgc ctacatcgcg
     4861 cgcgtgagcg gtgcgccggt tgcgacttat agcgtgcgtc cgcgcgtctt tgcggcaacg
     4921 cagggcgtga ccggtgcggt gcaggtgcgt cgggatgagt tgcgcgcgcc aggtgggcgt
     4981 cggggccctg ctggaccagg tgcgctgccg ggcgccggcc cgccgcggct cggcgcaatc
     5041 tcggtccaac gcacgaacac ggtgatacag ccgagcgcgg cagcaacggc gccgcagccg
     5101 cttggcaaga acgagcccgg ccagctcggc acgcacccgc cgcgcgccgc gcaaggcccg
     5161 gcaccgtcaa catcgacccc gcctgcatcg cctcagcaat caggtgcgcc ctcgccgccg
     5221 tccgcatcgc aacgtcagac gccatcggtt cagcagacgg cgcccaagcg gccgccaccg
     5281 ccaggccaag tgccttcggc aggactgcca aacaccgcgc cgcctgccaa tgccgcgcct
     5341 ttgcggcagg agcatcgcga gcggccgccg ccgggcggac cgccgtcgca gcccaacatt
     5401 gtgcggccga ttccgtctca ggtgccgccg ggaacgccgc agcgacaagt gcagccctcg
     5461 cctcaggtcg cgccctcgcc acaacgacag gtgcagccac cgcctcaacc ggcgccgccc
     5521 ctgcagcgac aag
//
LOCUS       DATDHO010000914         1854 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_294165, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000914 DATDHO010000000
VERSION     DATDHO010000914.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294165"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..>1854
                     /locus_tag="VIY07_18010"
     CDS             119..>1854
                     /locus_tag="VIY07_18010"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HEY6383686.1"
                     /translation="MGEDRVERRLAAILAGDIAGYSRLMSVDEEGTLHDLKVHRKELV
                     DPKITEHRGRIVKTTGDGILVEFVSVVDAVRCAVDIQRSMADRNAEVPVDKRVQFRIG
                     INVGDIIIDGGDIFGDGVNVAARLETLADPGGIMVSSVVHDQVRDKLSFGFEDMGEQI
                     VKNISRPVNVHRVHLTEVSPEKAKSDSGQQKPVSIGSERPSIAVLPFANMSGDPEQEY
                     FADGITEDIITGLSKLRWFFVIARNSSFAYKGKAVDVKRAARELGVRYILEGSVRKGG
                     NRVRITAQLIDAATGNHIWADRYDGELADVFALQDEITKKVVAAIEPKLLEAEGLRSQ
                     SRSPEELGAWDMVIQANSLFWRLTKNETERAIEMLERAVEQYPEYAPAHSLLAFAVLT
                     SGYIGSRLTEAQLNQAIAVAGRAAELDDSDPSAHLALGFAAFMKRQTPVAAAEFHRAL
                     SLNPNFAAAHGYLGWTLAFDGQTALARAHLEEAIRLSPHDPQNAIFNTGLAIVHYFDG
                     RYTEAVEYSRKAIQQRSAFIAAYRIHVASLAQAGQINEAREALARLKEWHPVLSIAWI
                     EQNVPYTPGPMA"
BASE COUNT          409 a          518 c          527 g          400 t
ORIGIN      
        1 cttattgcag cgcatatgtc ggcttatgac ccaaagcgga catcgaccaa tttcgcatgt
       61 gctaatgcac aaaagtgtat actgcccttt tccactctag cgaccgggta cgttcagcat
      121 gggggaggat cgcgtcgagc gcagacttgc cgcgattttg gccggcgata ttgccggtta
      181 cagccgcctc atgagcgtcg acgaagaggg cactcttcac gacctcaaag ttcatcgcaa
      241 ggaactggta gatccgaaga tcaccgagca tcgcggccgc atcgtcaaga caacgggcga
      301 tgggatcttg gtggagttcg tcagcgtggt cgacgctgtg cgctgcgccg ttgatattca
      361 gcgcagtatg gccgatcgca atgccgaggt gccggtcgac aagcgtgtcc agtttcgaat
      421 cggcatcaat gttggcgaca ttataatcga tggcggtgat atttttggtg acggcgtcaa
      481 cgtcgcggca cggctcgaga ctctcgctga tccaggcggg atcatggttt cgagcgttgt
      541 tcacgaccag gtgcgcgaca agctcagctt cggtttcgag gacatgggcg aacagatcgt
      601 caagaacatt tctcgtccgg tcaacgtgca ccgcgtccat ctaactgaag ttagcccgga
      661 aaaagccaaa agtgattccg gccaacagaa accggtttca atcggctctg agcgtccgtc
      721 gatcgcggta ctcccctttg ccaatatgag cggagacccc gagcaggaat atttcgccga
      781 cggcatcacc gaagacatta ttacgggtct gtcaaagctg cgctggttct ttgtgatcgc
      841 ccgcaactcc tcgttcgcat acaagggcaa agctgtcgac gtgaaacgtg cggcgcgcga
      901 gcttggcgtg cgttacatcc tggaaggtag tgtccgcaag ggcggaaatc gcgttcggat
      961 taccgcgcaa ctcattgacg ccgcgaccgg caatcatatt tgggccgatc gctatgatgg
     1021 cgaattggcc gatgtttttg ccttgcagga tgaaattacc aagaaagtgg ttgccgcaat
     1081 cgaaccgaaa ctgctcgagg ccgagggtct gcgctcgcaa agccgctcgc cggaggagct
     1141 tggtgcctgg gacatggtga ttcaggcaaa ttcgctattc tggcgattga cgaagaacga
     1201 aaccgaacgc gcaatcgaaa tgctcgagcg ggccgtcgaa caatatcctg agtatgcgcc
     1261 agcgcacagc ctgttggcat tcgcggtgct gacctctgga tatattggct cgcgcctgac
     1321 ggaagcgcaa ttgaaccagg ccatcgctgt tgctggtcgg gcagctgagc tcgacgacag
     1381 cgatccatcg gcgcatctcg cgctaggctt tgcggcgttc atgaagcgcc aaacccccgt
     1441 cgcagcggcg gagttccatc gtgcgctctc ccttaacccc aactttgctg ccgcccacgg
     1501 ctatctcggt tggactctcg cgttcgacgg ccaaaccgca ttggctagag cccatttgga
     1561 ggaggcgata cgtttgagtc cacacgaccc gcagaacgca attttcaata cgggtcttgc
     1621 tatcgtccac tatttcgacg gtcgctacac tgaagcagtc gaatatagcc gcaaggccat
     1681 acagcagcgg tcggcattta ttgcagcata ccgcatacat gtcgcaagct tagcgcaggc
     1741 tggacaaatc aacgaagctc gcgaggctct tgcccgctta aaggaatggc atcctgttct
     1801 ctccattgca tggattgaac agaacgtccc ctatacgcct ggcccgatgg ccaa
//
LOCUS       DATDHO010000915         3003 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_343383, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000915 DATDHO010000000
VERSION     DATDHO010000915.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3003
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_343383"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VIY07_18015"
     CDS             complement(<1..549)
                     /locus_tag="VIY07_18015"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663939.1"
                     /note="Catalyzes the transfer of electrons from NADH to
                     quinone; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HEY6383687.1"
                     /translation="MAETSLRNFTINFGPQHPAAHGVLRLVLELDGEVVKRVDPHIGL
                     LHRGTEKLIEHKTYLQAVPYFDRLDYVAPMNQEHAFCLAAEKLLGLTVPRRAQLIRVL
                     YCEIGRLLSHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERASGSRMHAAYFRVGG
                     VHQDLPGKLIDDIEAFCNPFLKV"
     gene            complement(549..980)
                     /locus_tag="VIY07_18020"
     CDS             complement(549..980)
                     /locus_tag="VIY07_18020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HEY6383688.1"
                     /translation="MKPTLKAGLKHSFSYKVPENKTVPYTYPESPVIAAMPKVFATGF
                     MIVLMEWTCTQLLGDHLDQGEGSLGTHVDVSHLAATPPGMTVKVDVEVAEVQGRKIIF
                     KVSAHDGIDLIGEGRHERVVVAWDRFNEKVAEKTKMAELVS"
     gene            complement(977..1630)
                     /locus_tag="VIY07_18025"
     CDS             complement(977..1630)
                     /locus_tag="VIY07_18025"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEY6383689.1"
                     /translation="MDDMLDRLGQTIKSALGDAIAGYEIARGELTVTGRLPDLIKVAT
                     FLRDDPACQFINIIDVTAVDWPSREKRFDVVYHFLSPRLNQRIRLKVATDETTPVASL
                     INVFRGADWFERETYDLYGVLFTGHPDMRRILTDYGFEGHPLRKDFPLTGFVEVRWDD
                     EQKRVVYDKVTLAQEFRSFDFLSPWEGTNYVLPGDEKAKAEGTGNKLTGEPEKKVSS"
     gene            complement(1643..2203)
                     /locus_tag="VIY07_18030"
     CDS             complement(1643..2203)
                     /locus_tag="VIY07_18030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014489760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEY6383690.1"
                     /translation="MTLVAPTPSGVLDPRTGKPVGSDDSFFTGVNAELSDKGFLVTAA
                     DDLITWARTGSLMWMTFGLACCAVEMMQMSMPRYDAERFGFAPRASPRQSDVMIVAGT
                     LTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGC
                     PPTAEALLYGVMLLQKKIRRTGTIER"
     gene            complement(2211..2576)
                     /locus_tag="VIY07_18035"
     CDS             complement(2211..2576)
                     /locus_tag="VIY07_18035"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEY6383691.1"
                     /translation="MSALLLDYLPLVIFIAVALGIGLALLIAPFIVAYKQPDPEKLSA
                     YECGFNAFDDARMKFDVRFYLVAILFIIFDLEVSFLFPWAVVFREIGAYGFWSMMVFL
                     GVLTIGFIYEWKKGALEWD"
BASE COUNT          618 a          912 c          903 g          570 t
ORIGIN      
        1 caccttcagg aaggggttgc agaacgcctc gatgtcgtcg atcagctttc ccggcaggtc
       61 ctggtgcacg ccgccgacgc ggaaataggc cgcatgcatt cgcgagccgg aggcgcgctc
      121 gtagaacacc atcaacttct cgcgctcctc gaagccccac agcggtgggg tgagcgcgcc
      181 gacgtccatc gcttgcgtag taacgttaag caggtgcgag agcagccgcc cgatctcgca
      241 atagaggacg cggatcaatt gcgcgcggcg cggcaccgtc agcccgagca gcttctccgc
      301 cgcgaggcag aacgcgtgct cctggttcat cggcgcgacg tagtcgagcc ggtcgaaata
      361 gggcacggcc tgcagatacg tcttgtgctc gatcagcttt tcggtcccgc gatggagcag
      421 tccgatgtga ggatccacgc gcttcaccac ctcgccgtcg agctcaagca ccaaccgtaa
      481 cacgccatgc gcggccggat gctggggccc gaagttgatg gtgaaattgc gtaatgacgt
      541 ctcggccatc agctcacaag ctccgccatc tttgtcttct cggcgacctt ctcgttgaag
      601 cgatcccacg ccaccacgac gcgctcgtga cgtccctcgc ctatcaggtc gattccgtca
      661 tgggcgctga ccttgaagat gatcttgcgc ccctgcacct cagcgacttc cacgtcgacc
      721 ttgacggtca tgccaggcgg cgtagcggcg agatgcgaaa catccacgtg ggtgccgagg
      781 ctgccctcgc cctgatcgag atgatcgccg agcagttgcg tgcacgtcca ttccatcagc
      841 acgatcatga agccggtcgc gaacaccttg ggcatggccg cgatgaccgg cgattccgga
      901 tacgtatagg gcacggtctt gttttccggc actttatagg agaacgagtg cttgagcccc
      961 gctttgaggg ttggcttcat gacgacacct tcttttcggg ttcgccagtc agcttgttgc
     1021 cggtgccctc ggctttggct ttttcgtctc cgggcagcac gtagtttgtg ccttcccagg
     1081 gcgagaggaa gtcgaagctg cgaaattcct gcgccagcgt caccttgtcg taaacgacgc
     1141 gcttctgctc gtcgtcccag cgcacctcga cgaagccggt gagcgggaaa tccttgcgaa
     1201 gcggatgacc ctcaaaaccg taatcggtga ggatgcgccg catgtccggg tgtccggtga
     1261 acaggacgcc gtaaagatcg taggtttccc gttcgaacca gtccgctccc cggaagacat
     1321 taatcaaaga cgccacggga gtggtttcat cggtcgccac tttcagtcgg atgcgctggt
     1381 tcagccgcgg ggagaggaag tggtaaacca cgtcgaagcg cttctcgcgc gagggccaat
     1441 cgacagccgt aacatcgatg atgttgatga actggcacgc cggatcgtcg cggaggaacg
     1501 ttgccacttt aatgagatcg ggcagcctgc cggttacggt caattccccg cgcgcgattt
     1561 catagccggc gatcgcatcg ccaagggcgc ttttgatcgt ttgcccaagc ctgtcgagca
     1621 tgtcgtccat ggccggcccc gctcagcgct cgatcgtgcc ggtgcgacga atttttttct
     1681 gcaaaagcat cacgccataa agcagcgctt ccgcagtggg cggacagccg ggcacataaa
     1741 tatcgaccgg aacgatgcga tcgcatccgc gcacgaccga ataggaataa tgataatagc
     1801 caccgccgtt cgcgcaggac cccatcgaga tcacgtagcg cggctcaggc atctggtcgt
     1861 agaccttgcg caaagccggc gccatcttgt tggtgagcgt gccggctacg atcattacat
     1921 ccgattgccg cggcgaggcg cgcggcgcaa aaccgaagcg ctccgcgtcg tagcgcggca
     1981 tcgacatctg catcatttca accgcgcagc aggcgagccc gaatgtcatc cacatcaggg
     2041 agccggtgcg cgcccacgtg atgagatcgt cggcggcggt gacaaggaag cctttgtcgg
     2101 aaagttccgc gttcacaccg gtgaaaaagg agtcgtccga gccgaccggt ttgccggtgc
     2161 gcggatcgag aacgccacta ggagtgggtg caaccagtgt catgggtttg tcagtcccat
     2221 tccagcgccc ccttcttcca ctcatatatg aagccgatgg tcagaacgcc aaggaacacc
     2281 atcatcgacc aaaagccata agctccgatc tcgcggaaga cgacggccca gggaaacagg
     2341 aagctcacct cgagatcgaa aatgatgaag aggatcgcga ccagatagaa gcgcacgtcg
     2401 aatttcatgc gcgcgtcgtc gaaggcgttg aagccgcatt cgtaggcgga caatttttcg
     2461 gggtctggct gcttgtaggc gacgatgaag ggggcgatca gtaacgcgag gccgatgcca
     2521 agcgccaccg caatgaatat gaccagaggc aagtagtcca gaagcaatgc gctcatcgcg
     2581 acctctagcg tgcagccccg ccctacctga ttatacgccc gccccggact gctcggcggc
     2641 ccgaaaggcg ccggttatcc cgcacaaatg ggcccttatt tgctggaata gcctcaagac
     2701 gggagcggtc gaggcttagc gcagcgcaca cagggtggca agccgacatt cggcggcatc
     2761 cacgaacgat cgcctcaggc gtggggttta cgtaattgac aggggagcaa gccgcccacg
     2821 atagtcgcca cggggcagac gcggtcaaat tcgggaaaaa tgcatggctc ttgtgcgata
     2881 tttcgcagcc ctggtctcct tcgcgagttt ggtcgcaatc accccaccag tggcgcatgc
     2941 aggcgagtac ccctcgcgcc ctgtgaaggt cattgtcccg tttggcgcgg gaggaccaac
     3001 cga
//
LOCUS       DATDHO010000916         1762 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_144979, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000916 DATDHO010000000
VERSION     DATDHO010000916.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1762)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1762)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1762
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_144979"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..360
                     /locus_tag="VIY07_18040"
     CDS             <1..360
                     /locus_tag="VIY07_18040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383692.1"
                     /translation="IAIGALVCRGILFAFVRDPYLLVIIQLLDGISAAVLSVLIPLII
                     VDVTYGSGHFNLAQGFVGTATGLGASVSMVFAGYLSDHFGNEIAFLSLTASAATAFAL
                     VWLMMPETRPQIAHAQE"
     gene            complement(545..754)
                     /gene="ccoS"
                     /locus_tag="VIY07_18045"
     CDS             complement(545..754)
                     /gene="ccoS"
                     /locus_tag="VIY07_18045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018447663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEY6383693.1"
                     /translation="MTDFFYLIPLALVLGAAGLAAFLWSLKSGQYEDLEGAAERILSN
                     EDDKPIVNGRQPNSSPETGDKSVKN"
     gene            complement(751..>1762)
                     /locus_tag="VIY07_18050"
     CDS             complement(751..>1762)
                     /locus_tag="VIY07_18050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HEY6383694.1"
                     /translation="QGIMLKDGGALERLAEVETVVFDKTGTLTLGEPRLVDGSVIDPD
                     ALGLAAAIASHSQHPYSRALVAAHQGPVCSPNSMTSVSEYPGSGLEACIGATVHRLGR
                     PEWALADGEAPQSVPDMATIALSKNGRCLATFRFVDRLRPGVPEAVAALADYGLAVEV
                     LSGDREQPVRQLASALGVPHHSPVSPADKANHIASIEASGRKVLMVGDGLNDAPALVA
                     AHASMAPASAADVGRNAADLVFLRESLLSVPQAVTVARNARRLVRENLIIAVGYNAVA
                     MPVAILGYVTPLIAAVAMSLSSLIVVANALRLNDGHRNRRKDDSRTSNLSSPQFALEG
                     GQ"
BASE COUNT          364 a          521 c          510 g          367 t
ORIGIN      
        1 attgccatcg gcgcgctcgt atgccgcgga atattgtttg cattcgtgcg cgatccgtat
       61 ttgctcgtca tcatccagct gctggatgga atatcggcgg cggtgcttag cgttctgata
      121 cccttgatca tcgttgacgt cacctatgga tccggccact tcaatctcgc acaaggattt
      181 gtcggcaccg cgaccgggct cggcgcttcc gtcagcatgg tctttgccgg gtatctcagt
      241 gatcactttg gcaacgaaat cgcgtttttg tcactgacag ccagcgcggc gaccgcgttt
      301 gctttggttt ggctgatgat gcctgaaacc cggccacaga tagctcatgc acaggagtga
      361 cactgccgat ttcggaaaca tcgtggtgct ttgtcccaaa gcagatgaac ctaactgact
      421 caatcgaacg aattttttac cgaatgcccg cctggttggt agagaccaac caacatgtcc
      481 ggcttttggc ccttagagga cattattgag cagcggcttg actgtggtca gttgtgccat
      541 tgcttcagtt cttcacagac ttatcgccgg tctcaggtga ggaatttggt tgtcgcccgt
      601 tcacaatggg cttgtcgtcc tcattggaca agatccgctc cgccgcgccc tccagatctt
      661 catattggcc gctcttgagc gaccacaaaa aggcagcaag tccggccgcg cccaagacca
      721 acgcaagagg aataagataa aaaaagtctg tcattgcccg ccctccagcg caaattgcgg
      781 cgaggaaaga ttgcttgtcc gcgaatcgtc tttgcgtcgg tttctatgac cgtcgttaag
      841 gcgtagtgca ttggcaacaa caatcaatga cgacagagac atggccaccg cagcgatcag
      901 cggcgtcaca tatcctagga tggccacagg catcgcaacc gcattgtaac cgacagcgat
      961 gatcagattt tctcgtacca gccgccttgc atttcgggca acggtgaccg cctgcggcac
     1021 cgacagcagg ctctcgcgca ggaacaccag atcggcggcg ttccgaccga catcggcagc
     1081 ggatgcgggt gccatcgagg cgtgtgcggc gacgagtgcc ggcgcgtcat tgagcccgtc
     1141 gccaaccata aggacctttc gacccgatgc ctctatcgac gcgatatggt ttgccttgtc
     1201 ggcaggagat acgggggaat ggtgaggaac gccgagcgca gaggcgagtt gccgcaccgg
     1261 ctgttcgcga tcgccagaca agacctccac ggcaagccca taatctgcga gtgccgcgac
     1321 tgcctcggga acgcccggac gaagccgatc cacgaaccgg aatgtcgcca gacatcggcc
     1381 gttcttcgac aaggcgatgg tggccatatc cggaaccgat tggggcgctt ccccatccgc
     1441 aagcgcccat tcgggtcggc ccagccgatg cacggtggcg ccgatgcaag cctccaggcc
     1501 cgagcccggg tattcggaca cgctggtcat tgaattgggc gagcaaacgg gtccttggtg
     1561 tgcagcaacc aacgcccgag aatatggatg ctgcgagtgc gatgcgatcg cggcagccag
     1621 cccaagcgcg tctggatcga tcacgctgcc gtcgacaagc cgcggctcgc caagcgtcag
     1681 ggtgccggtc ttgtcaaaga cgacggtttc gacttcggcg aggcgttcga gcgcaccgcc
     1741 gtccttgagc atgatgccct gt
//
LOCUS       DATDHO010000917         4791 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_43657, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000917 DATDHO010000000
VERSION     DATDHO010000917.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4791)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4791)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4791
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43657"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..993
                     /locus_tag="VIY07_18055"
     CDS             <1..993
                     /locus_tag="VIY07_18055"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEY6383695.1"
                     /translation="RIVETPDGRAISVINRPVKGGQYWIGTHDDITERIHAERRNAAM
                     SEQERRRVEIETEIRAFRKSVAEVLLTVTESTAALKSIAVDLSGSSGRTSERTAGAVD
                     MSNEASANMTAAAGAAEELIASIGEIGRQIGQAAEVASHSVAEARTTDEHMTRLADTV
                     QHIGEVVNLISHIAGQTNLLALNAAIEAARAGEAGRGFAVVASEVKSLAVQTAKATEQ
                     IARQIEAVQNSTRVAVDAIRRNTERMREIDGYTSAVALSLQQQDSATDEISHNVASAA
                     HGAKGMVTVLDEVTRAVGDTRSAASKVLKASETVEAAAKSLQRGIEGFLGRVAV"
     gene            complement(1004..1861)
                     /locus_tag="VIY07_18060"
     CDS             complement(1004..1861)
                     /locus_tag="VIY07_18060"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEY6383696.1"
                     /translation="MAKKKIIFQGEPGANSHLACREAYPEHEPVPCPTFEDCFAAVIA
                     GDVDLGMIPIENSVAGRVADIHHLMPTAGLHIVAEWFLPIRNQLMAPKGATLKTIRTV
                     QSHVMALGQCRNIIRELKLKPVVAADTAGSAREVAEAKDPARAAIASRLAADIYGLEI
                     LKENVEDESHSTTRFIVLSREKKWAQPGNGKVVTTFVFRVRNVPAALYKALGGFATNS
                     VNMTKLESYMVGGNFFATQFYADVEGHPDDRALVFALEELAFFSKELTVLGVYPAHPF
                     RDTFKEEKD"
     gene            complement(1910..2638)
                     /locus_tag="VIY07_18065"
     CDS             complement(1910..2638)
                     /locus_tag="VIY07_18065"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEY6383697.1"
                     /translation="MPKAIILIPARLASTRLPGKPLADLHGMPMIVHVLRRAEAAKIG
                     DVVVATDSEPVAAAVEKAGGRAVMTRSDHVSGSDRIYEALEALDPEHDFSIIVNVQGD
                     LPTIDPADIRAALKPLAEPQVDIATLAAVITDHAELTNSSVVKVAGARIAPNRLQAKS
                     FSRQDASGAGPHYHHIGLYAYRRAALERFVALPPSTNEQREKLEQLRALDAGMRIDVV
                     VVKSVPLGVDTPGDLDKARRLLGG"
     gene            2800..3372
                     /locus_tag="VIY07_18070"
     CDS             2800..3372
                     /locus_tag="VIY07_18070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HEY6383698.1"
                     /translation="MDSFELNKILGAILGTCLVLLALNITAGAIFTPEKPSKPGFNIA
                     VKEAEGEKAGPKEPEQPIETLLAKASVEKGQTAAKQCQACHTFEKGGPNRVGPNLWNI
                     VNRPRASEAGFNYSAAMKGKPGNWSFDDLNKFLANPRGYLPGTNMTFAGLTRAEQRAD
                     IIDYLRTLADNPVPVPKAAEAAPAGGEQKK"
     gene            3568..>4791
                     /locus_tag="VIY07_18075"
     CDS             3568..>4791
                     /locus_tag="VIY07_18075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY6383699.1"
                     /translation="MKVSRRSVLRGSASALVAPVLASSILPSGRAAAEAPNWKHALSL
                     FGDTKYPEGFKHFDYVNPKAPQGGTVRQLAFGTFDNFNTVVSGVKGNIAAGTELFTET
                     LMTPALDEVSTEYGLLAEAVSFPDDFSSVTYRLRGQARWHDGKPITPDDVLYSFDVLK
                     KNSPFYGAYYRHVVKAEKAGEREIRFSFDGPGNRELPQIIGQLPVLPKHWWEGTDKSG
                     QKRDVAQTTLEPPLGSGPYRLKEFVPGRTLVYEKVDDYWGKDLNVIVGTRNFQTIRYE
                     YFRDSTVALEAFKADQADWRLENSAKEWATGYDFPAVREKRVVTEEFPIRNVGVMQAF
                     AFNVRREKFKDPRVRRAFNFAFDFEEMNRQIFFGQYRRIASYFEGTELASSGIPEGME
                     LEILQTVRDKIPADLF"
BASE COUNT          997 a         1425 c         1449 g          920 t
ORIGIN      
        1 aggatcgtgg agacgcccga tggccgtgcc atttcggtca tcaatcgacc ggtcaaaggg
       61 ggccagtact ggatcggcac ccatgacgac attacggaac gcatccatgc cgagcgcagg
      121 aacgctgcga tgtccgaaca ggagcgccgc cgcgtcgaaa tcgaaacgga gatccgggcg
      181 tttcgcaaaa gtgtcgctga agttctgttg acggtgaccg aaagcaccgc agccctgaaa
      241 tcgattgcgg tagatctttc gggttcatcg ggccgcacat ccgaacgcac agccggcgca
      301 gtggacatgt ccaatgaggc atccgccaac atgacggcgg cggcaggtgc tgccgaagag
      361 ttgatcgcat cgatcggcga aataggtcgt cagatcggcc aggcagctga agtcgcatcc
      421 cactccgttg ccgaggctcg cacgaccgac gagcatatga cccggcttgc cgacaccgtc
      481 cagcatatcg gcgaagtcgt gaatctcatc agtcacattg ccggtcagac aaatctgctc
      541 gccctcaatg ccgctattga ggcagcgcgc gccggcgaag cgggtcgagg cttcgcggtg
      601 gttgcctcgg aagtgaaatc gcttgcggtg cagactgcga aagcgaccga acagatcgcc
      661 cgccagatcg aggcggtgca aaattcaaca agggtcgcag tcgacgcaat tcgccggaat
      721 accgagcgca tgcgggagat cgacggctat acctccgcag tggcactgtc cctgcagcaa
      781 caggacagtg cgacggacga aatctcgcac aatgtggcga gcgccgcgca tggcgccaaa
      841 ggaatggtca ccgtgctcga tgaggttacg cgggccgttg gcgacactcg cagcgcggca
      901 agcaaggtgc ttaaagcctc ggaaacagtc gaagctgcgg cgaaaagcct gcagcgcggc
      961 attgaaggtt ttctgggccg cgtcgccgta tgactgccgc tgactagtcc ttttcttcct
     1021 tgaacgtgtc gcggaacgga tgggcggggt agaccccgag caccgtcagc tccttggaaa
     1081 agaacgccaa ttcttcaagc gcgaaaacca gcgcccgatc gtcgggatga ccctcgacgt
     1141 ccgcgtaaaa ctgcgtagcg aagaagttgc cgccgaccat gtagctttcg agctttgtca
     1201 tgttaacact gttggtggcg aaaccgccga gcgccttgta aagcgcggca ggcacgttgc
     1261 gcaccctgaa tacgaaagtc gtgacgacct tgccgttgcc tggctgggcc cattttttct
     1321 cgcgtgacaa aacgatgaaa cgcgtcgtcg aatgcgattc gtcttcgaca ttttctttca
     1381 ggatttcgag gccgtagata tccgccgcca gcctcgatgc gatcgccgcc cgcgctggat
     1441 ccttggcttc cgcaacctcg cgcgccgagc cagcggtatc cgccgcgacc accggcttga
     1501 gcttcagttc gcggatgatg ttgcggcact ggccgagggc catcacatgg ctctgtaccg
     1561 ttctgatcgt tttgagcgta gcgcccttgg gggccatcaa ttgattgcgt atcggcagaa
     1621 accattccgc aacaatgtgc agacccgcgg ttggcatgag atgatgaata tcggcaacac
     1681 gcccggctac cgaattctcg attggaatca tgcccaggtc gacgtcgccg gcgatcaccg
     1741 cggcaaagca gtcttcgaac gtgggacagg gcaccggctc gtgctccgga taagcctccc
     1801 gacaggcaag atgcgaattc gcccccggct ctccctgaaa aatgatcttc tttttggcca
     1861 tgtctacccg ccttgatggg cgttgcgtac gcagaccttc ggcctcaagt caaccgccga
     1921 gcagtctgcg cgccttgtcc aggtccccgg gcgtgtcgac gcccaagggc acgctcttaa
     1981 ccacaacgac gtcaatgcgc attcccgcgt cgagcgcccg caactgctcc agtttttcgc
     2041 gctgctcgtt agtcgacggc ggcagggcga cgaaacgctc caacgctgcc cggcgatagg
     2101 cgtagaggcc gatatgatga tagtgcggcc ccgcgccgga tgcgtcctgg cggctgaagc
     2161 tttttgcctg caggcggttt ggtgcgatcc gggcgcccgc gaccttgacg acgcttgaat
     2221 tcgtcagctc ggcgtgatcg gtgatgacgg ctgccaaggt ggcgatgtca acctgcggtt
     2281 cggcaagcgg cttgagcgca gcgcggatat ccgcgggatc gatcgtcggc aaatccccct
     2341 gaacgttgac gatgatgctg aagtcatgtt cgggatccaa cgcttccagc gcttcgtaga
     2401 tgcgatctga tccggagacg tgatcgcttc gcgtcatcac tgcgcggccg ccggcttttt
     2461 ccacggctgc ggcaaccggc tcggaatcgg tcgccacaac cacgtcgcca attttggcgg
     2521 cttcagcgcg tcgaagtacg tgcacgatca ttggcatgcc atgcagatcg gccaagggct
     2581 tgcctggcag gcgtgtggac gcgaggcgcg ccggtatgag gatgatcgct ttgggcatcg
     2641 ggattgccgg cacggatcgg ctgaataacg agtgtcaata atgccgcagg cgcttatacg
     2701 ggttgccata ggtcaggcaa accggtatct caacgccgct gccagaccct gtcggcgctc
     2761 gcccgccctg ccacgtcccg cctcgggagc tgtctttcga tggattcctt cgaacttaac
     2821 aagattcttg gcgccatcct gggcacctgt ttggtcctgc tcgcgctcaa tattacggcc
     2881 ggtgccattt tcacccccga aaagccgagc aagcccgggt tcaacatcgc ggtgaaagag
     2941 gccgaaggcg agaaagccgg gcccaaagaa cccgaacagc cgatagaaac attgctcgcc
     3001 aaggcctcgg tggaaaaggg tcaaaccgcc gcgaagcagt gccaggcctg tcacactttc
     3061 gagaaaggcg gcccgaaccg tgtcggcccc aacttgtgga atattgtaaa ccggccgcgt
     3121 gcctcggagg ccgggttcaa ctattcggct gccatgaaag gcaagccggg aaactggtcc
     3181 ttcgatgacc tcaacaagtt cctcgccaat ccgcgcggct atcttcccgg aacgaacatg
     3241 actttcgccg gtctgacccg cgccgagcag cgcgccgaca tcatcgacta tctgcgtacc
     3301 ttggcggaca atccggtacc ggtgcccaag gcggcggaag ccgccccggc aggcggcgaa
     3361 cagaagaaat aaacccaacg gacgcagcac tggcgagttc gatggccggc accgcacggc
     3421 cattttgctt cgactggccg gcgttgggac gcggaaaatt gagattacgt tgttgtaatg
     3481 cgggtttttg accgctggcg gggcaacgaa aaagcgccta attatccgcg accgtattct
     3541 gcgaagaggt catgcgggag taactggatg aaagtcagtc gtcgctctgt attgcgcggc
     3601 agcgcatcgg cactggttgc gcccgtgctg gcgtcctcaa tattgccgag cggtcgcgcg
     3661 gcggcggagg cgccgaattg gaagcacgcg ctgtctctgt tcggagacac aaaatatccg
     3721 gaaggcttca aacatttcga ttacgtcaat cccaaagccc cgcagggcgg caccgtgcgc
     3781 caactcgcct tcggcacgtt cgacaatttc aatacggtcg tttcaggtgt gaaaggaaac
     3841 atcgccgcgg gcaccgagtt gttcaccgag acgctcatga cgcctgcgct cgatgaggtc
     3901 tcgaccgagt atggattgtt ggccgaggcc gtcagctttc ctgacgattt ttcctcggtc
     3961 acatatcggc tgcgcggcca ggcgcgatgg cacgacggca agccgatcac tcccgatgac
     4021 gttctttatt cattcgatgt actgaagaag aacagcccgt tctacggtgc gtattatcgg
     4081 cacgtggtga aggcagagaa ggccggcgag cgcgaaatca ggttcagctt cgacggcccc
     4141 ggcaacaggg aattgccgca gatcattggg cagctgcctg tgctcccgaa acactggtgg
     4201 gaagggacag acaagtcggg ccagaagcgc gacgtcgctc agaccaccct tgagccgccg
     4261 ctgggatccg gaccctatcg tctcaaggaa ttcgtgccgg gccgcacgct ggtctacgaa
     4321 aaggtcgacg actattgggg caaggacctc aatgtcattg tcggcacccg caatttccag
     4381 acgatccgct acgaatattt ccgcgactcc acggtggcgc tcgaggcttt caaggccgat
     4441 caggccgact ggcgcctcga aaacagtgcc aaggaatggg cgaccggtta cgacttcccg
     4501 gcagtgcgcg agaagcgcgt cgttacggag gaattcccga tccggaacgt gggcgttatg
     4561 caggcgttcg ccttcaacgt ccgacgcgaa aaattcaagg atccgcgcgt ccgccgcgcg
     4621 ttcaattttg ccttcgattt tgaagaaatg aaccgacaga tttttttcgg ccagtacagg
     4681 cgcatcgcca gttacttcga aggcaccgag cttgcatcgt cggggattcc cgaaggcatg
     4741 gagctcgaga tcctgcaaac ggtgcgggac aagataccgg ccgatctgtt t
//
LOCUS       DATDHO010000918         1602 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_43661, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000918 DATDHO010000000
VERSION     DATDHO010000918.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1602
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43661"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1328
                     /gene="atpA"
                     /locus_tag="VIY07_18080"
     CDS             <1..1328
                     /gene="atpA"
                     /locus_tag="VIY07_18080"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018062864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEY6383700.1"
                     /translation="EDNVGVVLFGEYSLIGEGDVVQRTKRIMSVPVGPALIGRVVNAL
                     GEPLDDRGPIPTTEFAPIERLAPGVIDRQPVKEPLQTGLKAIDAMIPIGRGQRELIIG
                     DRQTGKTAIAIDTIINQKNTDVISIYVAIGQKRSTVAQVVKTLADYDVLDRTIVVSAS
                     ASDPATMQYIAPYCGCAMGEYFRDHGQHTLLIYDDLSKHAAAYREISLLLRRPPGREA
                     FPGDVFYLHSRLLERAAKLNAANGGGSLTALPIIETQAGDISAYIPTNVISITDGQIF
                     LEADLFHAGIRPAIHVGNSVSRVGGNAQIKAMKQVAGTLRLELAQFRELAAFAQFGSE
                     LDKATQAQLFRGERLTEILKQGQYQPVDVIKQMLVVFAGTQGFTDDLKLEEIGSFEKG
                     LYSFMDSAKGSLLQRLASEKTLSEQLRGELLSALKEYKEKFVAEKAVAT"
BASE COUNT          352 a          464 c          476 g          310 t
ORIGIN      
        1 aagaggataa cgtcggggtt gttctcttcg gcgaatattc gctcataggc gagggagatg
       61 tcgtccagcg caccaagcgg atcatgtcgg tcccggttgg tccggcgctc atcggaagag
      121 tcgtcaatgc gctgggtgaa ccgctggacg accgcgggcc catcccgacc acggagttcg
      181 ccccgatcga gcgcctggcg cctggtgtca tagatcgcca gcccgtgaaa gagccgcttc
      241 agaccggact caaagccatc gacgcgatga ttcccatcgg gcggggacaa cgagagctga
      301 tcatcggcga tcgccagacc ggcaagactg ccatcgcaat cgacacaatc atcaaccaga
      361 agaacaccga cgtcatctcc atctatgtgg ccatagggca gaagcgctcg accgtggcac
      421 aggtggtcaa aacgctggcg gattacgatg ttctcgaccg taccatcgtg gtttccgcct
      481 ctgcctccga tccggcgacg atgcagtaca tagcccccta ttgcggctgc gccatgggag
      541 agtacttccg cgaccacggt cagcacacgc tgttgatcta tgacgacctg tcgaagcacg
      601 ccgccgccta tcgggaaata tcgctgttat tgaggcgtcc tccgggccgg gaggcctttc
      661 ccggcgatgt gttctatctc cattcccgtc tgctcgagcg cgcagcgaag ttgaacgctg
      721 ccaacggtgg gggttctttg acggcgcttc ctatcatcga gactcaagcc ggcgacattt
      781 ccgcctatat cccgaccaac gtcatctcca tcaccgacgg ccagatcttt ctggaagccg
      841 acctgtttca cgccggcatt cgtcccgcca ttcatgtcgg caactcggta agccgcgtgg
      901 ggggaaatgc ccagatcaag gccatgaaac aggtggcagg cacgctgcgg ctggaactgg
      961 cgcagttccg ggaactagcg gcattcgcgc agttcgggtc ggaactggac aaggcgacgc
     1021 aagcccagct cttccgcggc gagcgtttga ccgaaattct gaagcagggc caatatcagc
     1081 cggtggacgt tatcaagcag atgttggttg tctttgcggg aactcaaggg tttacggatg
     1141 acctgaaact ggaagagatc ggttcgttcg agaagggatt gtacagtttc atggacagcg
     1201 caaagggctc gctgttgcag cgcctcgcca gcgagaaaac cctgagtgaa cagttgcgcg
     1261 gcgaacttct ctccgcattg aaagaataca aggaaaaatt cgtggccgag aaagctgtcg
     1321 ccacttagcc gatgcgcgcg tcctagcgtt tagtgacaaa tccaagatgg caaacgtccg
     1381 cgacatccga aggcgaattc gaagtgccaa aagcattcag cagatcactc gtgcgatgaa
     1441 attcgtctcc gcggcgcggc tgcgcaaagc gcaggaccgg gtcattgctg cgcgtcccta
     1501 cgcccagcaa atgctggcgg tcctcaatag tctggcgacc agggtacggg agcggagtca
     1561 tccactgctg gcgcggcggg gagatgaaaa aattggactt ct
//
LOCUS       DATDHO010000919         3043 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_392226, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000919 DATDHO010000000
VERSION     DATDHO010000919.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3043
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392226"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..705)
                     /locus_tag="VIY07_18085"
     CDS             complement(<1..705)
                     /locus_tag="VIY07_18085"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HEY6383701.1"
                     /translation="MIDGEGVRLAATAATLDDLFRRAGVRHPHTLALADPPNRDVFAW
                     GAPRKLSFAQADRAISACAARLRGLGSQTDSIVAMHLPNTVESIVTFLGVLRAGMAAV
                     PLPLLWRKAEIVSALGRVGAKAIVTCSRIGTEEQAEIAMQSAADLFSVRHVCGFGHGL
                     PDGLVSLDDIFSSDVIVAVSPRIGRDTSVAAITFNLDAAGFVPISRSHVELVAGGLEI
                     VRATGAAADAPVLSTIP"
     gene            complement(716..2503)
                     /locus_tag="VIY07_18090"
     CDS             complement(716..2503)
                     /locus_tag="VIY07_18090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEY6383702.1"
                     /translation="MLGTLGAAVGIGLRIAPAQVTSHALAMHGEPAWGPDFKYPTYAN
                     PIAPKGGHLVQGVVGTFDCLNPFIVKGLPAANMRGYIVESLLARGYDEPFTLYGLLAD
                     GVVTDAERNFVTFSINPAARFSDGRSVTPADVIFSWELLRDKGRPNFRTYYVKAVKAE
                     ATDARTVRFDLSGADDRELPLILGLMPILAKHAINPDTFEDTSFEPLLGSGPYTVTAV
                     KPGESVTFKRDKNYWGRDLPINRGLWNFDTIRFDYYRDGNTHFEAFKKGLYDLRVETD
                     PGRWQMAYDFPAMREGRVTKEDLSYGLPKGMQGLVFNTRRPIFSDVRVREAILQLFDF
                     EWLNHTYFFDLYKRTASYFDGCDLSAHGIPANAQERELLKPFADAVRADIMEGKWSPP
                     ITDGSGRDRANLGRAFTLFKSAGYELKGTQLIHVQSGRPFSFEILTTTRDQERLSLAF
                     ARNLKRAGIEPRVRTVDATQFERRRIAFDFDMMEYRWEQSLSPGNEQLFYWGSAAADQ
                     QGSRNYMGVKSKAVDAMIAAMLAATSRDDFVAATRALDRVLLSGFYVVPLYFPPVQWV
                     ARWTRIEHPSRTSLFGYLPETWWQKDLKP"
     gene            2790..>3043
                     /locus_tag="VIY07_18095"
     CDS             2790..>3043
                     /locus_tag="VIY07_18095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383703.1"
                     /translation="MDHRIASARPLGRALAVLAGAFVALLAGPAVAQQPPPQQKTTPA
                     APAQKQAPAQKQAPAQPTQPAQAPTPGAQPGQQQAGGDQP"
BASE COUNT          659 a          926 c          910 g          548 t
ORIGIN      
        1 cgggatagtc gacagcactg gcgcatcggc tgcagccccc gtcgcccgaa cgatctcaag
       61 gccgccggcg accaactcga cgtggctgcg cgatataggg acgaatccgg cggcatccag
      121 attgaaggtg attgccgcga cgctggtatc ccgaccaatg cgcggcgaga ccgccacgat
      181 cacgtcggaa gaaaaaatat cgtcgagcga tacaagaccg tcgggcaacc cgtggccgaa
      241 gccacaaaca tgccggaccg aaaacaggtc ggcggcgctc tgcatggcaa tttcggcctg
      301 ctcctcagtt ccgatgcgag aacaggtcac gatagccttg gccccaacgc gaccgagcgc
      361 cgatacgatc tcggctttcc gccagagcag cggcaacggc acagcggcca tgcccgcgcg
      421 cagcacgccg agaaacgtaa cgatgctctc caccgtattt ggcagatgca ttgccacgat
      481 gctgtcggtc tgcgatccga ggccacgcag tcttgccgca cacgccgaaa tcgcacgatc
      541 ggcctgcgca aagctgagtt tgcgaggagc accccaagcg aacacgtctc tgttcggcgg
      601 atcggcaagc gcgagcgtat ggggatggcg caccccggca cgccgaaata agtcgtcgag
      661 cgtcgcggcg gtggcggcca accgcacgcc ttctccgtcg atcatggacg aggcctcaag
      721 gctttaaatc cttctgccac catgtctcag gcaaatagcc aaacagcgac gtacgcgagg
      781 gatgctcgat tcgcgtccag cgcgccaccc attgcacggg tgggaagtag agcggcacaa
      841 cgtaaaatcc ggagagcaaa acgcgatcga gtgcgcgcgt cgctgcgacg aaatcatctc
      901 ggctggttgc cgcgagcatg gcggcgatca tcgcatcgac cgccttcgat ttgacgccca
      961 tatagttgcg gctaccctgt tgatcggcgg cggccgaacc ccagtagaac aattgctcat
     1021 tcccgggcga cagcgattgc tcccagcgat attccatcat gtcaaaatca aaggcgatcc
     1081 gccggcgctc gaattgagtg gcgtcgacgg tccgtacccg cggctcgatt ccggctctct
     1141 tgagattgcg cgcaaaagcc agcgaaagcc gctcctggtc gcgcgttgta gtcaggatct
     1201 caaaggaaaa cgggcgtccg ctttgaacat ggatcaactg cgtgcccttg agctcataac
     1261 cggcgctttt gaacagtgta aaagcgcggc caaggttggc acgatcgcgg cccgagccat
     1321 ccgtaatcgg cggagaccat ttgccttcca taatgtccgc gcgcacggcg tcggcaaacg
     1381 gcttcaataa ttcacgttcc tgcgcattag ccgggatgcc atgcgcggac aaatcgcaac
     1441 cgtcgaaata gcttgcggtt cgcttgtaca gatcgaagaa ataagtgtga ttgagccatt
     1501 cgaaatcgaa tagttgaaga atggcttcgc gcacgcgaac atcggaaaaa ataggccggc
     1561 gcgtgttgaa gaccagtcct tgcatgccct tcggaagccc ataagacagg tcttccttgg
     1621 tcacgcggcc ttcgcgcatg gcgggaaaat cgtaagccat ttgccagcgg ccgggatcgg
     1681 tctcgacacg caaatcgtac agtcctttct tgaacgcttc gaaatgcgtg ttcccgtcgc
     1741 ggtaatagtc gaaacgaatg gtgtcgaaat tccacagccc tcgattgatc ggcagatccc
     1801 gaccccaata gttcttgtcg cgcttgaagg tgacgctttc tcccggtttc acggcagtca
     1861 ccgtgtaagg tccgctgccg agcagaggct cgaaacttgt atcctcgaag gtgtctgggt
     1921 tgattgcgtg ctttgccaga atcggcatca gcccgaggat aagcggaagc tcgcggtcgt
     1981 cggcgccgga gaggtcaaag cgcacggtgc gcgcatccgt tgcctcggct ttgacggcct
     2041 tgacataata cgtgcgaaaa ttcggccggc ctttgtcacg cagcaactcc cacgaaaaaa
     2101 ttacgtccgc gggagtgacc gaccggccgt ccgaaaaacg tgcggccgga ttgatggaga
     2161 acgtcacgaa attgcgctcg gcgtcggtca ccacgccatc ggcaaggagc ccgtacagcg
     2221 tgaaaggctc gtcatagcct cgcgcaagca ggctctcgac gatatagccg cgcatattgg
     2281 ctgcaggcag ccctttgaca atgaatggat tgaggcaatc gaatgtgccg acgacacctt
     2341 gcacaaggtg accgcctttc ggcgcaatcg ggttcgcgta ggtcggatat ttgaagtccg
     2401 gtccccaagc gggctcgcca tgcatcgcca acgcatgcga tgtgacttgc gcgggggcga
     2461 tgcgtaagcc gatcccgaca gcggccccca gggttccaag catgacggag cgccgcgaca
     2521 ctcgcagctg cgtcacggcg aaatgatcag aatcgggccc gatgggtgct cgaatgcgat
     2581 tcgttccggt tttgcctgaa tttatcatac agatggaggt tccacggccg ggcattttta
     2641 gcggtttcgt ggctttattg cagcccggaa ttcggctatc aggcaccccc gagtgtcacg
     2701 ctcccgccgt atttcgcacg gagagagccg gctgcaaggc gacgttcggt agccatgggc
     2761 cgcgaacgca agaacaaggg ataatcgcaa tggatcatcg gatcgcatcg gcccggccat
     2821 tgggtcgggc gctggccgtt ttggctggag cgtttgttgc gctgcttgca gggccggcgg
     2881 tggcccagca gccgccgccg cagcaaaaaa cgacacccgc tgcgcctgcc cagaagcagg
     2941 cgcccgccca aaagcaggcg cccgcgcaac ccactcaacc cgcacaggcg ccgacgccgg
     3001 gcgcccagcc aggtcagcaa caggccggcg gcgatcagcc gca
//
LOCUS       DATDHO010000920         7776 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_486663, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000920 DATDHO010000000
VERSION     DATDHO010000920.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7776
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_486663"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(313..576)
                     /locus_tag="VIY07_18100"
     CDS             complement(313..576)
                     /locus_tag="VIY07_18100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383704.1"
                     /translation="MRTMTIAIPLSILMSVAAAAQEQRKSSTSPTPSPPTTAPGQTGI
                     PQAPVGHRQPTPSTLPPSVRKEEDSARREPDPLGPIPNICRNC"
     gene            704..982
                     /locus_tag="VIY07_18105"
     CDS             704..982
                     /locus_tag="VIY07_18105"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY6383705.1"
                     /translation="MSLSDSDRQSLRMQLVDEHVRLENRHDLDGIMTTFGTTARYDEP
                     WDTHYVGPDGVRAFYSDLLRALPDLQIDVQRRHASEATVASGVASMPS"
     gene            1223..2329
                     /locus_tag="VIY07_18110"
     CDS             1223..2329
                     /locus_tag="VIY07_18110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase NAD-binding
                     domain-containing protein"
                     /protein_id="HEY6383706.1"
                     /translation="MALQFIDYFVRSKRELSRIYSYNPDFSYFLFVLTCPADISANLS
                     GVAGTSPAITMLEGGTPMTKRVSVIGTGTIGASWAAYFLARGFAVGAYDPAPEGESFA
                     RRFIDNAWPTLEKLNAVRPDADRKRFEFFKDPAAATKRAEFVQENGPEREDLKVELFS
                     TLDAAVPPETVIATSSSGLLISRVSAKCKHPERCVIGHPFNPPHLIPLVEVVGGAKTS
                     PEAIYKAMRFYRDIGKHPIQIQKEVKGHVANRLQAALWREAVHLVNEGVVSVADADAA
                     IAYGPGLRWALMGPHLTFHMAGGEGGMAHFMSHIGPAIQTWMDDLGAPKLTPQTQKRI
                     IDGVAEEAAGRSIADLQRWRDRKLIEILKVAGEP"
     gene            complement(2365..2607)
                     /locus_tag="VIY07_18115"
     CDS             complement(2365..2607)
                     /locus_tag="VIY07_18115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383707.1"
                     /translation="MNIDIARHVARAAFKSSHELSELVPFLNDRLGAEEYAAYAKAIG
                     LAVAAIQVDLMNRLVADHPGLEAEIEASIEKHGRYV"
     gene            complement(2975..3241)
                     /locus_tag="VIY07_18120"
     CDS             complement(2975..3241)
                     /locus_tag="VIY07_18120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HEY6383708.1"
                     /translation="MCRNIKTLFNFEPPATEDEIRASSLQFVRKLSGFNKPSQANAAA
                     FERAVDEVSEAARRLLASLHTAAPARDREIEAEKARARARERFA"
     gene            3323..4093
                     /locus_tag="VIY07_18125"
     CDS             3323..4093
                     /locus_tag="VIY07_18125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6383709.1"
                     /translation="MPGLLQNHIAVVTGAGSGIGRAIAHGYAREGAQVVALDINGDTA
                     AKTAAEIRENNGKAHHFMLDVTDRAACRATAAKVASEVGQVSVLVNNAGINRRNAFTG
                     DPDAVIKDWQDIMAINLNGVFNVTHAFLEPLRASKGRIINIASIQSFMHVRTPNSPAY
                     TSAKHGVLGFTRALAAELGKHGVRVNAIGPGLIETPLNAQVRANNPDLVKIFLDHTPL
                     GRAGKPEDIAGPAIVLASDLSAYVTGSIVMADGGYRTV"
     gene            4160..4534
                     /locus_tag="VIY07_18130"
     CDS             4160..4534
                     /locus_tag="VIY07_18130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgcJ/EcaC family oxidoreductase"
                     /protein_id="HEY6383710.1"
                     /translation="MSPDERAIRDLVDTWMKATRAGDTATVLSLMSDDVIFMVPGREP
                     FGKDAFAATSQSMKGFRLEGTADIRELRVLGDWAYLRNFIEITVTPPGGAAVRRSGYT
                     LTILRKESDGRWRLMRDANLVS"
     gene            complement(4568..4795)
                     /locus_tag="VIY07_18135"
     CDS             complement(4568..4795)
                     /locus_tag="VIY07_18135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEY6383711.1"
                     /translation="MSRRPTTDTRAAAEKAFKAATTKPPELPAKAAPALPHVKHTVTL
                     RIDQDVLDFFQEEGPGWQDRINAALRKAAGK"
     gene            complement(4901..5074)
                     /locus_tag="VIY07_18140"
     CDS             complement(4901..5074)
                     /locus_tag="VIY07_18140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383712.1"
                     /translation="MMILMMVLLVVLPYGTALICGALTYWAGAIVSGFCSIGGLALGI
                     YFFHKCMELLVPS"
     gene            5216..5704
                     /locus_tag="VIY07_18145"
     CDS             5216..5704
                     /locus_tag="VIY07_18145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383713.1"
                     /translation="MTEPKLAKPRRNYIYATLCAAAGAYWLAVGLGLFPIPGGPSNLH
                     GPLWLLACAGLAFFLAGLVIAFQTLGQASAAGDLPAAAPRWMRALQYLVGLAIFCCFG
                     AIVTWIAFGPGERQFSGTFLFFDPATNAAIGRTAFGVGAVIIWLCTVAVAAAGLRKLL
                     AN"
     gene            5834..6241
                     /locus_tag="VIY07_18150"
     CDS             5834..6241
                     /locus_tag="VIY07_18150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383714.1"
                     /translation="MKYFFGLLFALLTSSAMAGTSAGYGMGGQFSRFDPVVAEHNRTG
                     ELFRIEGHCQSACTVFLGIKNVCVQPSARLLFHAGHDKQRNISAKWTNHMLAAYKPAL
                     RQYLVSNHYMDTLAFHTISGRELIDKFGYKACP"
     gene            complement(6459..6890)
                     /locus_tag="VIY07_18155"
     CDS             complement(6459..6890)
                     /locus_tag="VIY07_18155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383715.1"
                     /translation="MSMEIHVLSNKELASVTAWQRAIDSEGFNLKLDPEVKLESVSGF
                     LPAILHGKQSGFECFHDEVSELVETYAETPALDFRRHWKYALSFRWGSLAHEGVSVFM
                     AATAYAVATDGIVFDPQEGRMLTLEECREIARKWEREEFAA"
     gene            complement(7192..7689)
                     /locus_tag="VIY07_18160"
     CDS             complement(7192..7689)
                     /locus_tag="VIY07_18160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEY6383716.1"
                     /translation="MAFAVSSNSFKDGDYLPRDFILSADFGFGCAGGNKSPHLKWSGA
                     PSGTKSFAVTCYDPDAPTGSGFWHWLIVNIPANVSELELGAGSAGGKLPAGALQTRTD
                     FGAPGYGGPCPPEGDHPHRYLFTVFAVKAEKLDVKADTSAAVVGFNLHFNTLAKAEIM
                     GLFKR"
BASE COUNT         1567 a         2430 c         2258 g         1521 t
ORIGIN      
        1 caaccgtgcg cacgcggttc tcgcgcatgg cgatgagcat cgtgctgttt gccgcgggct
       61 gcgccgcagc ggccctgctc ttctggctcg tcgggttctg gtctctcgcc gttgcggtgt
      121 tgatcggcgc ggcggctgcc gtcatgcgcc tcgatgagag accgaagcac gtctagcgag
      181 attcgggcac caacccccgt tcattcccgc ccccgcctac gcgggagcag gctccagcgg
      241 gaatccagtc ttgcaaaaaa gaaaagctgg gtacccgctt tcgcggggac gaacgaagaa
      301 gatggccacc gttcagcagt tcctgcaaat gttcggaatg ggccctaacg gatcgggctc
      361 acggcgcgcg ctgtcttctt cctttcgcac ggagggcgga agcgtgctcg gtgtcggctg
      421 gcggtgaccg accggcgcct gaggtatgcc ggtctggcca ggcgccgtcg tgggcggcga
      481 cggtgtcgga ctggtcgaag acttgcgctg ctcttgcgct gcagcagcga cactcatcag
      541 aatcgaaagc gggattgcaa tcgtcatcgt gcgcatgatg ctgctccttc gcgaaccgat
      601 ccgtttctgt aactgcgacg gtctggtccg ggtttcttta acccgcctgg gaaccatagc
      661 atctatcgcc ggcgacgctt agcccgaaag cggaggtatt ggcatgtcgc tatcggattc
      721 cgaccgtcaa tcgctccgga tgcaactggt cgacgaacac gtgcggctgg aaaaccggca
      781 tgacctcgac ggcatcatga cgactttcgg aaccacggcg cgctacgacg agccgtggga
      841 tacccattat gtcggcccag acggcgtccg tgcgttctat tccgacttgc tgcgcgccct
      901 gcccgacctg cagatcgacg tgcagcggcg ccacgcgagc gaagcaacgg tcgcttctgg
      961 ggtcgcgtca atgccatcgt gatgcatccg gtgacgatgg cgcgaatcct ggggcggatg
     1021 atttggtgaa gtgagccgta atgaaatctt gtatccaaat tcgcgggtct cgctggcaac
     1081 gaatttcaac catcatgcaa agggattcta atcggggccg gtcagagtct agtcccgtgc
     1141 cgaaacgccg gcttaagccc accccctagt gcgctgtgcg cgtgccctcg tatctgatcg
     1201 cctggtattg cggcggaaaa tattggcgct gcaattcatc gattatttcg tgcgctcgaa
     1261 gcgtgagttg tcaagaattt attcctacaa ccctgacttt tcctatttct tgtttgtgct
     1321 cacttgtccc gctgatatca gtgccaacct gagcggggtg gccgggacga gcccggccat
     1381 cacaatgctg gaaggtggga cccccatgac aaaacgcgta tcggtaatcg gcacaggcac
     1441 catcggcgcc agctgggcgg cctatttcct ggcgcgcggc ttcgcggtcg gcgcctacga
     1501 cccggcgccg gaaggcgaaa gcttcgcccg ccgcttcatc gacaatgcct ggccgacgct
     1561 ggaaaagctc aatgcggtgc ggcccgatgc cgaccgcaag cgcttcgagt tcttcaagga
     1621 tccggccgcc gccacaaagc gcgcggagtt cgtgcaggaa aatggacccg agcgcgagga
     1681 cctcaaggtc gaattgttct cgacgctcga cgccgcggtg ccgcccgaaa cggtgatcgc
     1741 cacgagctcg tccgggcttc tcatcagccg cgtcagcgcg aagtgcaaac atccggagcg
     1801 ctgcgtaatc ggccatccgt tcaatccgcc gcaccttatt ccactcgtcg aagtggtcgg
     1861 cggcgcaaaa acctcgccgg aagcaattta caaggcgatg cgattctacc gcgacatcgg
     1921 caagcatccg atccagatcc agaaggaagt gaaaggccac gtcgccaacc gcctgcaggc
     1981 tgcgctgtgg cgcgaagccg ttcacctcgt caatgaaggc gtggtttccg ttgccgatgc
     2041 cgacgccgcg atcgcctacg gcccgggcct gcgctgggcg ctgatgggcc cgcacctgac
     2101 gttccacatg gccgggggcg aaggcggcat ggcgcatttc atgtcgcaca ttggcccggc
     2161 gattcagaca tggatggacg atctcggcgc gccgaagctg acgccgcaaa cgcaaaaaag
     2221 aatcatcgac ggcgtcgccg aggaagcggc cggccgcagc atcgccgacc tgcaacgctg
     2281 gcgcgaccgc aagctgatcg agatcctgaa ggtggcgggc gagccttgag aggtagttgc
     2341 agccttagtc gcgattggct tctatcaaac gtaccggccg tgtttttcga tgctggcctc
     2401 gatttccgcc tcgagccccg gatgatcggc tacgagcctg ttcatcagat caacctggat
     2461 tgccgcaacg gccaatccga ttgcctttgc gtaagccgca tattcttctg cacccaaacg
     2521 atcattgaga aacggcacaa gttccgagag ttcgtgcgaa ctcttaaaag cggctcgcgc
     2581 aacatgacgt gcaatatcga tgttcactgt gaaagctcct tagtttttaa agccggcaat
     2641 aaacattgac tatttgcttg tcgtctcgct cataacccgt tcgtgccccg gcgaaccggg
     2701 tacgagtcag ggcgatcgag gttactttat ccatacgaaa agtccgccac tccgagagca
     2761 atggcgattg ctgccacgcc cgtagtaaat cgtttccggc tttatcggct ccgaatatgt
     2821 gcggctctac gaacctcgtc gtcgtgtcgt aagttacttc caatacgatt tgtgcaccga
     2881 ttgcctggca aatccgtgag tcgatcattg gctcccccaa tccaacgtcg ccgctcgcga
     2941 accgccaaaa agggaccccg tctgcggcgc agcgtcaggc aaagcgctcg cgggctctcg
     3001 cgcgcgcctt ctccgcttcg atctcgcgat cgcgcgcagg cgcggcagtg tgcagtgagg
     3061 ccagcagcct gcgcgccgct tccgacacct catcgacagc gcgctcgaac gccgccgcat
     3121 tcgcctgcga cggcttgttg aagccggaga gcttgcgcac aaactgcaac gaggaggcgc
     3181 gaatttcatc ctctgtcgcg ggtggctcga aattgaacaa cgtctttatg ttgcggcaca
     3241 tcggactggc tcctttcctg ccaatgtagc aacccgtgcc ggaggtcgct atccttcgcc
     3301 cgcatttcaa ggggaaggaa caatgccagg acttctgcaa aatcacatcg cggtggtgac
     3361 cggcgcaggt tccggcatcg gccgcgcgat tgcgcacggc tatgcccgcg aaggcgcgca
     3421 ggtggtcgcg ctcgacatca acggcgacac agccgccaag acggctgcag agatccgcga
     3481 gaacaacggc aaggcgcatc acttcatgct cgacgtgacc gaccgcgctg cctgccgcgc
     3541 caccgcggcg aaagtcgcaa gcgaagtcgg ccaggtctcc gtcctggtca acaatgccgg
     3601 catcaaccgc cgcaacgcct tcaccggaga tccggacgcc gtgatcaagg actggcagga
     3661 catcatggcg atcaatctca atggcgtgtt caacgtgacg catgcgtttc ttgagccgtt
     3721 acgcgcgagc aaggggcgga tcatcaacat cgcctcgatc cagtcgttca tgcatgtgcg
     3781 cacgccgaac tcgccggcct atacgtccgc gaagcacggc gtgcttggct ttacccgcgc
     3841 gctcgccgcc gagctcggca agcatggcgt gcgcgtcaac gccatcggac cgggcctgat
     3901 cgaaacgccg ctcaacgcgc aggtgcgcgc caacaacccc gacctcgtga aaatctttct
     3961 cgaccacacg ccgctcggcc gcgccggcaa gccggaagac atcgcgggcc cagccatcgt
     4021 cctcgcatcg gacctgtcgg cttacgtgac aggatcgatc gtcatggccg acggcggcta
     4081 ccgcacggtt tgagcgcagc cggaacatct cgcaggctca aacgtagacg caggctgttc
     4141 aagcccgtga ggcaccatca tgtcccccga cgaacgcgcc attcgcgacc tggtcgacac
     4201 atggatgaaa gcaacccgcg cgggcgacac cgcaaccgtg ctcagcctga tgtccgatga
     4261 cgtgatcttc atggttcccg gccgcgagcc gttcgggaag gacgctttcg ccgccacttc
     4321 gcaaagcatg aaaggctttc gcctcgaagg cacggcggat atccgcgagc tcagagtgct
     4381 cggcgactgg gcctatctgc gcaatttcat cgagatcacc gtcacgccgc cgggcggcgc
     4441 ggcggtgcgc cgctcgggct acacgctgac gattttgcga aaagagtccg acggccggtg
     4501 gcggctgatg agggatgcca atctggtgag ttgaagacgc gtccgcgtca ctcaaccggc
     4561 acgcgcgtta cttgccggcc gctttccgca aggccgcgtt gatgcggtcc tgccaacccg
     4621 ggccctcttc ctgaaaaaag tcgaggacat cctggtcgat gcgcagcgtc accgtgtgct
     4681 tcacatgcgg cagcgctggc gctgcctttg ccggcagctc cggtggcttg gtcgtcgcag
     4741 ccttgaacgc cttctcggcg gcggcgcggg tatcggttgt aggacgtcgc gacatgaaac
     4801 ctgtctttag aggcaatgcc cgtctctcgc aacgttcgcc atcgattgca agttccggac
     4861 aattaagaaa tataagacaa tcgcattgcc gttaatcatc tcagctcggc acaagaagct
     4921 ccatgcattt atggaagaaa taaataccga gcgcgagccc accgatgctg cagaagcccg
     4981 atacaatcgc accggcccaa tacgtcaaag cgccacagat gagtgcagtg ccgtaaggca
     5041 gcaccaccag caggaccatc atcaggatca tcatttgggt tatcccgcga tggcgtattt
     5101 tcgccgcgga acagcgaggg cgcaaggtta aagagcgtaa atcgagggtc cccacgggtt
     5161 taagcaaatt gcaagcccac cggcgctaat ctcagcccga cccggggctg cgccaatgac
     5221 cgagccaaag ctcgccaagc cgcgacgcaa ttacatttat gccacgctct gcgcggcagc
     5281 gggcgcctat tggctcgcgg tcggtctagg cctgtttccg attcccggcg gtccttcaaa
     5341 tctgcatggt cctctttggc tgctggcctg cgcgggcctg gcattttttc ttgccggcct
     5401 tgtgatcgct ttccagacac tcggccaggc cagcgcggcc ggcgatctcc ccgccgcagc
     5461 gcctcgctgg atgcgcgcgc tgcaatatct ggtcggcctt gcgatcttct gctgcttcgg
     5521 tgcaatcgtc acatggattg cattcggtcc gggcgagcgg caattttccg gaacgttcct
     5581 cttcttcgat ccggcgacga atgccgcgat cgggcggacc gccttcggcg tcggtgcggt
     5641 catcatctgg ctatgcacag ttgccgtggc ggcggcaggc ttgcgaaaac ttcttgccaa
     5701 ctgaagacaa gccgcgtgcc ggttgatcct gtgccggccg caaagcagac cctcgtccga
     5761 ttttcggatg acgccgaaac ccgccttgtt gcggtataga gaaacgcgcc gacggcaaga
     5821 gaggaatcaa cacatgaaat atttcttcgg gcttctattt gcactgctca cgtcttccgc
     5881 catggccgga acatccgcgg gatacggcat gggtggacaa ttttcgcgct tcgatccggt
     5941 tgtagcagag cacaaccgca ccggtgagct attccgaatc gagggacatt gccaatcagc
     6001 ctgcacggtg tttctcggca tcaaaaacgt ctgcgtgcag ccgagcgcgc ggctgctgtt
     6061 tcatgccggg catgataaac agcgcaatat cagtgcaaaa tggaccaacc atatgctggc
     6121 ggcatacaag ccggcgctcc ggcaatacct ggtctccaat cactacatgg acacgctcgc
     6181 gttccacacc atctccgggc gcgaactgat cgacaagttc ggctacaagg cttgtcctta
     6241 gtagtttcaa gtgcttactg ctgaaaagcg gtcccggtcg gttttcggat cgccagtcgc
     6301 atagatctgc tcgagacgat gcacgacttc gcagcgatat ttcgaaagaa aatcgcgaaa
     6361 actgtcccgc ggttcggcga tggccaatga cgagctgcag aagatcgaaa cccagagcaa
     6421 ggctgccgcg tcactgacta tccgacaagc atgcgatctc acgctgcaaa ctcttccctc
     6481 tcccacttgc gcgctatctc acgacattct tcgagcgtga gcattcttcc ttcttgcgga
     6541 tcgaatacga tgccgtcagt tgccactgca tacgctgttg cagccatgaa gaccgatacg
     6601 ccttcatgcg cgagactgcc ccagcgaaaa ctgagcgcgt atttccaatg acgcctaaaa
     6661 tctagagccg gcgtctctgc gtaggtttcc acgagttcgc tcacctcatc gtgaaagcat
     6721 tcaaagcccg actgtttgcc gtgcaatatc gctggcaaaa aaccgctcac cgattcgagt
     6781 ttgacctctg ggtccaactt aaggttgaac ccctcagaat cgatggcacg ctgccaagca
     6841 gtaacagatg ccaactcttt attggacaaa acatggattt ccatcgacat ggcgctgcct
     6901 ccctcgcccc caatacaaac agaacagaac acaatctagg gttttgggag acattggccc
     6961 aacacgccat cgactagggg gatgatgcgg ctcgaggaag caggcaacca cggaggcgtt
     7021 acacgcgcgt ctggattccc gcgtgcgcgg cccgttccct ggcccaggtt ctctcgttca
     7081 tccccgcgaa agcggggacc cagagcgcac gtcactgaat tattgctttt ctgatttccc
     7141 gcttgcgcgg gaatgaacgg agggggtggc gcgcgcgaaa ctgaccgctg gtcagcgctt
     7201 gaacagcccc atgatctcgg ctttcgccag cgtgttgaaa tgcaggttga agccgaccac
     7261 ggcggccgag gtgtccgcct tgacgtcaag cttctccgcc ttcaccgcaa agacggtgaa
     7321 gagataacgg tgcggatgat cgccttcggg cgggcaagga ccgccataac ccggcgcacc
     7381 gaagtccgtc cgcgtctgca gcgcgcccgc cggcaacttg ccgcctgcgc tgcccgcgcc
     7441 gagctcgagt tcgctgacat tcgccggaat attgacgatc agccagtgcc agaagccgga
     7501 cccggtcgga gcatcggggt catagcaggt cacagcaaag ctcttcgtac ccgagggcgc
     7561 gccggaccat ttcagatgcg gcgacttgtt gccgccggca cagccgaatc cgaaatcggc
     7621 cgacaggatg aaatcccgcg gaagatagtc gccatccttg aagctgttgc tgctgaccgc
     7681 aaatgccata cccgcctcct gtcatccaga cgcgggagag cctagcccgg ttgggacaaa
     7741 ccgcaatggt gccgcggatg ccgaaaatat gttcat
//
LOCUS       DATDHO010000921         2619 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_43884, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000921 DATDHO010000000
VERSION     DATDHO010000921.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2619)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2619)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2619
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_43884"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..796)
                     /locus_tag="VIY07_18165"
     CDS             complement(<1..796)
                     /locus_tag="VIY07_18165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HEY6383717.1"
                     /translation="MARTAASPATRGGPAQKPQRSLDEFRKTWVQAFRRVRAETEARA
                     AHLSAEDQIVQSMPDASPTKWHRAHVTWFFEQFLLVPHDPNYRIFDERFSFLFNSYYV
                     AAGPRHARPQRGLITRPNGEDVTAYRAHVDEAVESLIAEVSAADAERVFAIVEIGLHH
                     EQQHQELMITDILHAFAQNPTDPVYDPKWQPPRATQGPRGFVEVPAGIHAIGHDGDGY
                     CFDNELPFHNELIPRVRIARHLVTNAEWIEFIDAGGYQTPSLWLSDG"
     gene            complement(1391..1672)
                     /locus_tag="VIY07_18170"
     CDS             complement(1391..1672)
                     /locus_tag="VIY07_18170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383718.1"
                     /translation="MLKLTSRFVLQVLPYLLVALAAVVVLPQVTDSLIRASLPAAGLS
                     PSREIEMIFEPLDQGETTLDLIDQDHEAFAPNRFFREIAKAVEADLENR"
     gene            1863..2507
                     /locus_tag="VIY07_18175"
     CDS             1863..2507
                     /locus_tag="VIY07_18175"
                     /inference="COORDINATES: protein motif:HMM:NF020771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CerR family C-terminal domain-containing
                     protein"
                     /protein_id="HEY6383719.1"
                     /translation="MTRPAEYTRDLIIKAAVSLFAEKGFERSSVRDIVTKARVNQAAI
                     NYHFKGKDGLYFEVLKIAFARLTENAGIDAEDLKSLSREQALRRFVGHQLRPLLFQDE
                     MSRYIRMFAWESAHPSKVFRKFVATNTTSYLSAAVDLVRRFLPPNTQERAALCAAICL
                     MGQCDVFVRNRELFAQDPFRMTIDETFVDELADLITRFAMGGLPHADDARLKSA"
BASE COUNT          588 a          748 c          743 g          540 t
ORIGIN      
        1 agccatcgga gagccaaagc gatggagtct gataaccgcc cgcgtcgatg aattcgatcc
       61 actcggcgtt cgtgaccagg tgccgtgcaa tgcgaacgcg cgggatcaac tcattatgga
      121 agggcaactc attatcgaaa caataaccat cgccgtcatg accgatcgcg tgaattcccg
      181 cgggcacctc gacaaaccca cgcgggcctt gcgtcgcacg cggcggctgc catttcggat
      241 cgtaaacggg gtcagtcgga ttctgcgcaa aggcgtgcag aatgtcggtg atcatcaatt
      301 cctgatgctg ttgctcgtgg tgcaatccga tctcgacgat cgcaaacacg cgctcggcat
      361 ccgccgccga cacctcggca atcaggcttt cgaccgcctc atcgacatgg gcgcggtagg
      421 cggtaacgtc ctcaccgttc ggccgggtta tcaacccgcg ctgcggccgc gcatgacgcg
      481 ggccggcggc gacatagtag gaattgaaaa gaaaggagaa acgttcgtcg aaaatccggt
      541 aattcggatc gtgaggcacc agcaaaaact gttcgaagaa ccaggtgacg tgagcgcgat
      601 gccatttcgt cgggctggca tccggcattg actgaacgat ctggtcttca gccgacagat
      661 gtgcggcgcg ggcctcggtt tcggcccgca cccggcggaa cgcctgcacc caggtttttc
      721 ggaactcatc cagggaacgc tgcggcttct gcgccggccc accgcgtgtg gccggcgacg
      781 ctgctgtccg cgccatggag aggtctccta actatacaaa gggcttcggc agtcgatata
      841 ggtacagata cgatttagac atgcgattgt tccatcgcat gttggcccgg gcaacctgga
      901 attgcgactg aatcgcggcc tgacgccctt gtgatcgtca ccgatcggtt ggtagcggga
      961 aaccgctgca gttcttcggc gcgtccgcgg cggcagccat taaaaacaag cgcactttgg
     1021 aatgcacatt cgcgaccttg gcgcctcccg gcaataccgt agcccttggc ccggtatgcg
     1081 ctattcatga cgctgacaac agacaaaatg tactgttatg acccgagcgg cattcgttcc
     1141 gcttgtcgga gcagcgtcca aaccgatttc ggatggtgcg aagcgcagat caacctgaat
     1201 gaccgtgctt tgcgcgccac tttggcccag gtccgcgcat gtagtgccgt tccggccgat
     1261 acgatctctc gcgcggttcc ggccgacatg agaagattgc ggccctcagc gcccgaacca
     1321 gaccccacca aggggcccgg tgagacaaat tcggcactcc gttttgtgaa cgcatgcgca
     1381 actccttgcg ttagcgattc tcaagatcgg cttcgacggc tttcgcgatt tcacggaaga
     1441 accggttcgg tgcgaacgct tcatgatcct gatcaatgag atcaagcgtc gtttcgcctt
     1501 gatcgagagg ctcaaagatc atttctatct cgcgggacgg tgacaaaccg gccgcgggga
     1561 gcgaggccct tatcaaggaa tcggtaacct gtggcagcac gacaactgca gccagggcca
     1621 caaggagata gggcagcact tgcaggacaa accgcgatgt cagcttcagc acggaagacc
     1681 cccaactcgt tgagtggctt cgtcgcaaac gatcatttca aacggtattt tataattcaa
     1741 acggtcgttt taggcagaat gatgaccgtt taaaaaggcc ctgatttttt gcaaaaagtt
     1801 gcattttggc cacggaagca ttacaagctt ggttcaaacg gttgtttgaa ctggggaaac
     1861 cgatgacccg tcccgccgaa tatacccgcg acctgatcat caaagccgcg gtctcgctgt
     1921 tcgcggagaa ggggttcgag cgatcgagcg tgcgtgacat cgtcaccaag gctcgggtca
     1981 accaggctgc catcaattat catttcaaag gcaaggatgg tttgtacttc gaagttctca
     2041 aaatcgcgtt cgcaaggcta acagagaacg cgggcatcga tgcggaagac ctcaaatcac
     2101 tttcacgcga acaggcgctc cgacgcttcg tgggccacca gctgcggccg ctgctttttc
     2161 aggatgaaat gagccgctac atccgcatgt tcgcctggga aagtgcgcat ccgtcaaagg
     2221 tctttcggaa gttcgtagcg accaatacaa cctcgtacct ttcggccgcg gtcgatcttg
     2281 tgcggcgatt cctgccacca aacacgcaag agcgggcagc tctttgcgca gccatatgct
     2341 tgatggggca gtgcgacgtt ttcgtgcgaa accgcgagct gtttgcacaa gatccattcc
     2401 ggatgacgat cgacgagacg tttgtcgatg aactggccga tctcattacc cgatttgcaa
     2461 tgggcggcct gccgcatgct gacgacgcca gactgaagag cgcctagaga gagagagaga
     2521 gagagagaga gatcactcca agtccgcttt ggccacaagc ggacgttatc cgttgccggt
     2581 ccagctaatc gtccaccttc attgatggcc ctaactcac
//
LOCUS       DATDHO010000922         1689 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_145302, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000922 DATDHO010000000
VERSION     DATDHO010000922.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1689
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145302"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(66..371)
                     /locus_tag="VIY07_18180"
     CDS             complement(66..371)
                     /locus_tag="VIY07_18180"
                     /inference="COORDINATES: protein motif:HMM:TIGR02215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail connector protein"
                     /protein_id="HEY6383720.1"
                     /translation="MNGNAHAIDTPGFVPDYGGSVLAFVPWAVPMPGRATAGIELDVS
                     IGFGDTIEDVPETLRQAVRLLVSHWYDNRGVVASAGQCAVLPSTVAALIAPYRRFSI"
     gene            complement(368..634)
                     /locus_tag="VIY07_18185"
     CDS             complement(368..634)
                     /locus_tag="VIY07_18185"
                     /inference="COORDINATES: protein motif:HMM:TIGR02215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail connector protein"
                     /protein_id="HEY6383721.1"
                     /translation="MSSLLLTGPAIEPLSLDEAKAFLRVEHSDDDQVISALIAGARTH
                     VETQSQVALITQGWRIVLDCWPQHGRIVVRPGPLKLSTPRASTI"
     gene            665..1411
                     /locus_tag="VIY07_18190"
     CDS             665..1411
                     /locus_tag="VIY07_18190"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like serine protease"
                     /protein_id="HEY6383722.1"
                     /translation="MSRGLPVMVCLMLGAPAFAVTGNAPPATGWAARPIVMIVDARDD
                     LCTGTALAQDLVLTAAHCVARQIQYTVKAYQTDTTVQVRSILRHPRFDYASYAASRAT
                     ADIALLKLAAPLPDVVVPAALAAPRRVAAGESLTIAGFGVNIAGTARGLGLPRMATLT
                     VTGTPGSLQIRLFDAATRNQTIGMGGCTGDSGAPAFDGDGPLVIGVVSWSTAPGDEEG
                     CGGLTGVTPLFSYRDWIVDNARKFNSPIAP"
BASE COUNT          323 a          523 c          504 g          339 t
ORIGIN      
        1 ggcaccatcc tcggactcta ccggcgcttc cagcaccagc cggcggttca aatcaccggc
       61 ggcggtcata tcgaaaacct ccggtaaggc gcaatcagcg cggcgaccgt cgatggcaag
      121 accgcgcatt gcccagcaga cgcaacaacg ccgcggttgt cgtaccagtg tgacaccaac
      181 agacggacgg cctgccgcag cgtctccggc acatcctcaa tggtgtcgcc aaagccgatg
      241 ctcacgtcga gctcgattcc agccgtcgca cggccgggca ttggcacggc ccagggcacg
      301 aacgcgagga ccgagcctcc ataatccggt acaaagcccg gcgtgtcgat cgcgtgggca
      361 ttgccattca aatcgtagaa gcgcgcggcg tggacaattt gagcggccct ggccgcacga
      421 caatgcgacc gtgctggggc cagcaatcga gcacaatgcg ccaaccctgg gttatcagcg
      481 cgacctgtga ttgtgtttcg acatgtgtcc gcgcgccggc aatcaacgcg ctgatgacct
      541 gatcatcgtc gctatgttcg acgcgaagga atgcctttgc ctcatcgagc gataacggct
      601 cgattgcagg tcctgtcagc aaaagagagc tcatgttttg tcctttgtgt tagcttcggc
      661 gggcatgtcc cgcggtcttc ccgtcatggt ttgcttgatg ctcggcgcac ccgctttcgc
      721 cgtaaccggc aatgcgccgc ccgccaccgg gtgggcggcg cgtccgatcg tgatgattgt
      781 cgatgcgcgg gatgacctct gcaccggaac tgcgctggcg caggatttgg tactgacggc
      841 cgcgcactgc gtcgctcggc agattcaata tacggtcaag gcgtaccaga ccgacacaac
      901 ggtgcaggtg cgctcgattt tgcgccatcc ccgctttgac tacgcaagct atgccgccag
      961 ccgggctact gccgacatcg ccttgctcaa gcttgcagca cccttgccgg atgttgtggt
     1021 gcctgcggcc ttggcggcac cgcggcgtgt tgcggcgggc gagagcctca cgattgccgg
     1081 ctttggcgtc aacattgccg gtacggcgcg aggacttggt ctgccgcgca tggcgacact
     1141 cactgtgaca ggcacgcccg ggtcgttgca gattcggtta ttcgacgcgg caacacgaaa
     1201 tcaaacaatc ggaatgggcg gatgcaccgg agattccggc gcgccggcgt tcgatggcga
     1261 cggtcctctg gtcataggcg tggtcagttg gtcgacggct ccaggcgatg aagagggctg
     1321 cggcggcctg acgggggtta caccgctgtt ttcgtaccgc gactggatcg tggacaatgc
     1381 gcgcaaattc aattcgccaa ttgcaccttg aaaagcggcc gtcggtggtg ccgcactctt
     1441 aatgtctcac ttttaatgtt ttgcttttag agtttcacaa gcaaagaccc cgggccgaag
     1501 cccggggcct gcaatttcga ctgaaactga ctttaccagc actggcggat cttccttatt
     1561 cgcccattga actcctcacg aacgattcgg caattccgtc gatagctata cccatcgtcg
     1621 taggcgtaac tacgatagcg ggggccataa tatccgtcgt gataacccca gcccggaccc
     1681 actccgacg
//
LOCUS       DATDHO010000923         1998 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_294557, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000923 DATDHO010000000
VERSION     DATDHO010000923.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1998)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1998)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1998
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294557"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..877
                     /locus_tag="VIY07_18195"
     CDS             <1..877
                     /locus_tag="VIY07_18195"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383723.1"
                     /translation="TPTLAVAGAEDLTQRKPNPYFSRPGSTSAQCAHVMADYALKELK
                     YKRVATIADDFAYGHENVGGFHRVFEDGGGKVVQKLWTPLNAPDYGTYISQLKPDLDA
                     LFTAHAGSNGLKLIRQLAAYGSKLKIIGAYTPIDESLIQQMGDDALGAYTGNFYSAEL
                     DNAENKKFVELMRRDYKVDPGVYAACTYLFGEVIEAAAKTVGGKVEDKDEFQKAIRAV
                     KLQNSLRGPMHFDDLGNVVGTFYVRRVEKKGDKYVNAVVKSYPNTSQFWTYKKDEFLK
                     QPVYSRDFPPARNLE"
     gene            963..1823
                     /locus_tag="VIY07_18200"
     CDS             963..1823
                     /locus_tag="VIY07_18200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383724.1"
                     /translation="MQFWIVQTLNSISFGALLFLLSSGFSLAFGLMRIPNLAHGAFYM
                     LGAYFGATVVYIGGNFWLAALAAGAGVGLVGIAIERFILRPLAGNVQGQVLVTLGISF
                     IIADICLLVWTGDPWTVPAPPSLRRPLVIAGYAFPTYRLVVVLIALIAAVALYLLMDR
                     TRLGAMIRAGVDDMEMARGVGIPVSLLFTVVFLFGAVLAGAAGAFGGPILNAYPGLDT
                     DMLPLALIVVILGGAGSLLGAFVGSFVVGFLYNFGIALFPDLAYFILFLPMVLVLMFM
                     PQGLFGKALP"
BASE COUNT          344 a          622 c          588 g          444 t
ORIGIN      
        1 cacgccgacg ctggccgttg ccggcgccga agatctgacg cagcgcaaac ccaatccgta
       61 tttctcgcga ccgggttcga cctcggcgca gtgtgcgcac gtgatggccg actacgccct
      121 caaggaactc aagtacaaac gtgtggccac catcgccgac gatttcgcat acggccacga
      181 gaatgtcggc ggcttccatc gcgtgttcga agatggcggc ggcaaggtag tgcagaaatt
      241 gtggacaccg ctcaacgcgc ccgactacgg cacctacatc tcccagctca agcccgatct
      301 cgatgcgttg ttcaccgcgc atgctgggtc gaacggattg aagctcatcc gccagttggc
      361 cgcatacgga agcaaactga agatcatcgg cgcttacacg ccgatcgacg agtccctgat
      421 ccagcagatg ggcgacgatg cactcggcgc ctataccggc aacttctact cggccgaact
      481 tgataacgcc gaaaacaaga agttcgtcga actgatgcgt cgtgactaca aggtcgatcc
      541 cggtgtctat gcggcctgca cgtatctttt cggcgaagtc atcgaagcgg ccgccaagac
      601 cgtcggcggc aaggtcgagg ataaggacga gttccagaag gcaattcgcg ccgtgaagct
      661 gcaaaattcg ctgcgcgggc cgatgcactt cgacgacctt ggcaacgtgg ttggcacttt
      721 ctacgtccgc cgtgttgaga agaagggcga caagtacgtg aatgcggtgg tcaagtctta
      781 tccgaacacc agccagttct ggacgtacaa aaaggatgag ttcctgaaac agccggtcta
      841 ttcgcgcgac ttcccgccag cgcgcaacct cgaatgataa gcgatttgaa acgatgccgg
      901 ccgcgtgaac ttgtttcacg cggccgcgcg gccttagccg gcgtcacgcg agcaacggtc
      961 caatgcagtt ctggatcgtc cagactctga acagcatttc gttcggcgct ttgctgttcc
     1021 tgctgtcgtc gggcttttcg ctggccttcg gcctgatgcg catccccaat ctcgcccatg
     1081 gcgccttcta catgctcggc gcctatttcg gcgccaccgt cgtctatatc ggcggcaact
     1141 tctggctcgc cgccctggcc gccggtgccg gcgtcggcct cgtcggcatt gcgattgaac
     1201 gcttcatcct gcggccgctc gccggcaatg tgcagggcca ggttctggta acgctcggca
     1261 tctctttcat catcgccgat atctgcctgc tggtgtggac cggcgacccg tggacggtgc
     1321 cggcgccacc atcgctgcgg cggccgttgg tgatcgccgg ctacgcgttc ccgacttacc
     1381 ggctggtggt ggtgttgatt gcgctgatcg cggcggtcgc gctttatctg ctgatggatc
     1441 gcacgcggct cggtgccatg atccgtgccg gcgtcgatga catggaaatg gcacgtggcg
     1501 tcggcattcc ggtatcgctg ctgttcacag tcgtgttcct gttcggcgcg gtgctcgcgg
     1561 gcgctgccgg cgcatttggc ggaccaatcc tcaacgccta tccggggctc gacaccgaca
     1621 tgctgccgct ggccctgatc gtcgtgatcc tcggtggggc cggttcattg cttggcgctt
     1681 tcgtcggtag cttcgtggtc ggctttcttt acaactttgg catcgcgctg tttcccgacc
     1741 tcgcctattt catcctgttc ctgccgatgg tgctggtgct gatgttcatg ccgcagggct
     1801 tgttcggaaa ggccctgcca tgacccgcac cgcaatagcc gctgtgatca tcgcggtcct
     1861 gagcctggcc gtgccttggg tcatcaccaa cgactattac gtcaatctcg ccagcctaat
     1921 tctgatctac gcactgctcg ctttgagcgt gaacatcttg ctcggctatg gtggcatggt
     1981 ttcgctcgga catgccgc
//
LOCUS       DATDHO010000924         1596 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_196102, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000924 DATDHO010000000
VERSION     DATDHO010000924.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196102"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..496)
                     /locus_tag="VIY07_18205"
     CDS             complement(<1..496)
                     /locus_tag="VIY07_18205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-tyrosine phosphatase family protein"
                     /protein_id="HEY6383725.1"
                     /translation="MIHVCSLARLHATVDETGARHIVTLLRLVDRVQRPNHIAPENHL
                     VLAVDDITMPMEGYTAPAHEHVQRLVDFVSAWDRKAPMVIHCFAGISRSTAGAYVAAC
                     ALNPERDEMQIAWDIRRASRTAQPNSRIVTIADRLLKRDGRMIRAIEAIGLGDAATEG
                     HPFRL"
     gene            complement(561..1187)
                     /locus_tag="VIY07_18210"
     CDS             complement(561..1187)
                     /locus_tag="VIY07_18210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HEY6383726.1"
                     /translation="MTKTAKRGRLAKSTPRAWQRMLSGRRLDLLDPSPLDVELDDIAH
                     GLARVARWNGQTQGAHIFSVAQHALLVEALARAKVPRLDRNGRIAVLLHDAPEYVIGD
                     MISPFKAVIGDSYKAVEKRLLTAIHLRFGLPAKLPESLENLIKSADRSAAYLEATHLA
                     GFATDEARKFFGPPPKFSSSLVRDYLNPWSAGTAQARYVERFEKLLRA"
     gene            complement(1184..>1596)
                     /locus_tag="VIY07_18215"
     CDS             complement(1184..>1596)
                     /locus_tag="VIY07_18215"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEY6383727.1"
                     /translation="RRAFDDFAPEKIARYQKRKIESLMKDAGIIRNRAKIEGAVSSAR
                     AWLEIMESGPGFSKLLWSYVDGKPKLNKFRTTRQVPGETSLSQKISKDLVARGFKFVG
                     PTIVYAFMQAVGMVNDHLVTCHRYAPLAKLAGKR"
BASE COUNT          302 a          475 c          495 g          324 t
ORIGIN      
        1 cgagccggaa gggatggcct tcggttgccg cgtctccgag gccgatggct tcgattgccc
       61 ggatcatccg gccatcgcgc ttgagcagcc ggtcggcaat cgtcacgatc cgcgagttcg
      121 gctgcgccgt acgcgatgcg cgccgaatgt cccacgcgat ctgcatttcg tcgcgctccg
      181 gattcagcgc acaggccgcc acataggcac ctgctgtcga acggctgatt cctgcaaagc
      241 agtgaatcac catcggcgcc ttgcggtccc aggcgctgac gaagtcgacg aggcgctgga
      301 catgctcatg cgccggcgcg gtgtaacctt ccatcggcat ggtgatgtcg tccaccgcga
      361 gcaccagatg attttccggc gcaatatggt tgggccgctg gacccgatcg accagccgca
      421 gcagggtgac tatatggcgc gctccggttt cgtcgactgt ggcgtgcagg cgcgccaatg
      481 agcagacatg gatcatgcgt taggcaggaa ccctgattct tttgtttaaa tgtaagacct
      541 gaataccgcg attcaaaccc tcaggcacgc agaagttttt cgaaacgttc aacgtagcgt
      601 gcctgtgcgg tgccggcgga ccagggattg agatagtcgc ggaccaggct cgaggagaat
      661 ttcggcggcg gcccgaagaa tttccgtgcc tcatctgtgg cgaagccggc gaggtgcgtc
      721 gcttccagat aggcggcgct ccggtcggcg gatttgatca gattttccag gctttcgggc
      781 aacttggccg gaaggccaaa tcgcaaatga attgcggtga gcagccgctt ctccacagcc
      841 ttgtagctgt cgccaatgac cgccttgaat ggcgagatca tgtcgccaat gacgtattcg
      901 ggggcatcgt ggagcagcac ggcgatacgc ccatttcggt cgagccgcgg cacttttgcg
      961 cgcgccagcg cctccaccag caaggcatgc tgcgcgacgg aaaaaatatg tgcaccctgg
     1021 gtctgcccat tccagcgcgc gacccgcgcc agaccatgtg caatgtcatc aagctcgacg
     1081 tcgagcggcg aggggtcgag caggtcgagc cgacggccgg aaagcatgcg ctgccaggcg
     1141 cgcggggtcg atttcgccaa gcgccccctt tttgccgttt tggtcatcgc tttccggcga
     1201 gcttcgccag cggcgcatag cggtggcagg tgacgagatg gtcattgacc attccgacgg
     1261 cctgcatgaa agcgtaaacg atcgtcggtc cgacaaattt gaagccacgc gcgacaagat
     1321 ccttcgaaat cttttgcgat aaagacgttt cgcccgggac ctgtctggtc gtgcggaatt
     1381 tgttgagctt gggcttgccg tccacgtagc tccagagcag ctttgaaaat cccgggccgc
     1441 tttccatgat ctcaagccac gcgcgggcag acgacaccgc gccctcgatc ttggcgcgat
     1501 tgcgaatgat gccggcatcc ttcatcagcg attcgatctt gcgcttctgg tagcgcgcga
     1561 ttttttccgg cgcgaagtcg tcgaaagcgc ggcgaa
//
LOCUS       DATDHO010000925         2757 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_145729, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000925 DATDHO010000000
VERSION     DATDHO010000925.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145729"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            622..1467
                     /locus_tag="VIY07_18220"
     CDS             622..1467
                     /locus_tag="VIY07_18220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011160284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEY6383728.1"
                     /translation="MRVLKRSMRLAADAFRQFNEDDGWAIASHIALSTLMALFPFLIV
                     VTVLAGFFFGSAELADEAARILLEAWPNQVAAPIAADITGVLTSTRGDVLTLGVLFAL
                     YFASSGVESLRIGLNRAYNIKEMRSWWLLRLESIVYVLVGAVAILAFSFLVVLAPLIL
                     SKLLHYVPALEQFVDLITVARYAVAATVLIFALMIVHLWLPAGRRTFKEIGPGVIATL
                     LLWLISGAVFGRYLANYAFAYVSMYAGLASAMVALVFLYVCSSIFIYGGELNSAIAKA
                     RIEDR"
     gene            complement(1464..2741)
                     /gene="ccrA"
                     /locus_tag="VIY07_18225"
     CDS             complement(1464..2741)
                     /gene="ccrA"
                     /locus_tag="VIY07_18225"
                     /EC_number="1.3.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003610459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043880 - crotonyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonyl-CoA carboxylase/reductase"
                     /protein_id="HEY6383729.1"
                     /translation="MPAVAKARGVAPLKSLYDIGEIPPLGHVPEKMHAWVIRKERHGP
                     PDQSFQLEVVPTWTIGDDEVLVYVMAGGVNYNGIWAGLGVPISPLDGHKHPFHIAGSD
                     ASGIVWAVGAKVKRWKVGDEVIVHCNQDDGDDEDCNGGDPLLSPSQRIWGYETPDGSF
                     AQFCRVQSRQLMPKPRHLSWEESACYTLTLATAYRMLFGHPPHTLKPGDNVLVWGGSG
                     GLGVFGVQLVAASGANAIGVISDESKREYVLNLGAKGVVNRKDFKCWGQMPAVNTPEF
                     NEWTKEARRFGKAIWDVTGKKDVDIVFEHPGEQTFPVSCLVVKRGGMVVFCAGTTGYN
                     LTFDARYVWMRQKRIQGSHFAHLKQASAANRFVLEQRIDPCMSEVFAWDKIPLAHMKM
                     WKNQHPPGNMAVMVNALRTGLRTFDDALEAAGS"
BASE COUNT          505 a          824 c          832 g          596 t
ORIGIN      
        1 agagtgcgtc gaggaccgcg ctcgtttcgc gtgcgaggcc caccagatcg tgatcctggg
       61 cgggacggga ggcggcaata ggcatcaagg gctcgccggt ggagcatgaa gatcgcaacg
      121 acactacgcg tgcaccgcac aaaagaaaag ccgtaaggaa atccggctct taggctggtt
      181 gctaagcaca gcccgaacac aagttgctat gaagaaatga cagtttccgg cctacaacct
      241 tacctctacg acgcatggct gttgccactg gcaagaccaa cccagttgca tgcttccctt
      301 cgaccccgtt ctgttcacgg cttcgaatct gctcgcctca gttccggtgc actacggctg
      361 tgccgcgcag gcaatcgaac aagttcgcgc cgtcatctgt gaggtgtcgg cgattgccag
      421 gacagttgcc gcgaggtcga cgagcaaaaa tcggcgttag cgttggccgg ggtgatgaat
      481 cgcgtgatgg tcagtgcttc tcagcaacgt acaagcggcg aattttgtct ttccgcgaac
      541 cagaaagtgg gcccaggaac ggggcttgaa aagcgcccgt caatagccga tttgagtggg
      601 tgccgccgac gggagcatcc attgcgagtt cttaagcggt caatgcggct tgcagccgat
      661 gcgtttcggc agttcaacga ggatgacggc tgggcgattg cgagccacat cgcattgtcc
      721 acgctcatgg ccttgtttcc atttttgatc gtcgtcactg tgcttgccgg atttttcttc
      781 ggatcggcag aactcgcgga cgaagccgct cgcatattgc tcgaggcatg gccgaatcag
      841 gtggctgcgc ccatcgctgc cgacatcacc ggcgtgctga cgtcgacacg cggcgacgtg
      901 ttgaccctcg gcgtcctgtt cgctctctat ttcgcctcga gtggcgtgga gagtctgcgc
      961 atagggctca accgcgctta caacatcaag gagatgcgct cgtggtggct gcttcgcctt
     1021 gaatcgatcg tctatgtgct cgtgggcgca gtggccatac tggctttttc attcctggtg
     1081 gtgctggcgc ccttgatact gtcaaaactt ctgcactatg tgccggcgtt ggagcaattc
     1141 gtggacctga tcaccgttgc gcgctatgcg gtggcggcca ccgtgctgat atttgcgttg
     1201 atgatcgtcc acctgtggct tccggcgggg cgacgaacct tcaaggagat agggcctggg
     1261 gttatcgcga ccttgctgct gtggctgatc agcggggccg tgttcggccg ctaccttgcc
     1321 aattacgcct ttgcctacgt ctccatgtac gcggggctgg catcggccat ggtcgcgctg
     1381 gtgtttctct atgtctgctc gtcaattttt atctatggcg gcgaactgaa ttcagccatc
     1441 gccaaggccc ggattgagga ccgttagctg ccggcggctt ctagggcgtc gtcaaacgtc
     1501 cgcaggcccg tgcgcaaagc attcaccatc accgccatgt tgcccggcgg atgctggttc
     1561 ttccacatct tcatgtgcgc gagcgggatt ttgtcccagg cgaaaacttc gctcatgcaa
     1621 ggatcgatgc gttgctccag cacaaaacgg tttgcagccg acgcctgctt gaggtgcgcg
     1681 aaatgcgagc cctggatgcg cttctgccgc atccaaacgt agcgcgcatc gaatgtgaga
     1741 ttgtagccgg tggtccccgc gcagaagacg accatcccgc cgcgctttac gaccaggcag
     1801 gaaaccggaa acgtctgctc gcccgggtgt tcgaatacga tgtcgacatc tttcttgccc
     1861 gtgacgtccc agatcgcctt gccgaagcgt cgcgcttcct tcgtccactc gttgaactcg
     1921 ggcgtattta ctgcgggcat ttggccccag cacttgaagt ccttgcgatt gaccacgccc
     1981 ttggcgccca gattgagaac atactcgcgc ttcgactcat cggatatgac tccgatcgca
     2041 ttggcgccgg aagcggcgac cagctgcacg ccgaatacgc cgaggcctcc tgagccgccc
     2101 cacaccaaca cattgtcgcc gggtttaagg gtgtgcggcg gatgcccgaa cagcatgcga
     2161 taggcggttg cgagcgtgag cgtgtagcac gccgactctt cccacgagag gtggcgcggc
     2221 ttgggcatga gctggcgcga ttgcacgcgg cagaactgcg cgaatgatcc gtcgggagtt
     2281 tcgtagcccc agatgcgttg cgagggcgac agcaacgggt cgccgccgtt gcagtcctca
     2341 tcgtcgccgt catcctggtt gcagtgaacg atgacctcgt cgccgacttt ccatcgcttg
     2401 accttggcac cgacggccca gacgatgcct gacgcatcgg agccggcgat gtggaacgga
     2461 tgcttgtggc cgtcgagcgg cgatatcgga acgccaagcc cggcccagat gccgttgtag
     2521 ttgacgccgc ccgccatgac gtagaccagc acctcgtcat cgccgattgt ccaggtcggc
     2581 accacttcca gctggaagga ttgatcggga gggccgtggc gttccttgcg gatcacccag
     2641 gcgtgcatct tttccggcac atgcccgagc ggcggaatct cgccgatatc gtagagactc
     2701 ttgagaggag caacacccct cgcctttgca acagccggca tcgacgttct ccctgcc
//
LOCUS       DATDHO010000926         3052 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_196151, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000926 DATDHO010000000
VERSION     DATDHO010000926.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3052
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196151"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..639
                     /locus_tag="VIY07_18230"
     CDS             <1..639
                     /locus_tag="VIY07_18230"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphatase class II"
                     /protein_id="HEY6383730.1"
                     /translation="DAGTLLHAPDCYMQKIAIGPGYSKGTIDLDAPADENIVNLARAK
                     GVKPSEITALLLDRPRHADIIAAVRKTGAAVSLISDGDVAGVIHCAEPKTGIDIYRGI
                     GGAPEGVLAAAALRCIGGQMQTRLIIDTEQLRERTLQMGIKDPRRKYEIDDMVKGDCL
                     FAATGVTSGAMLNGVKFGKDVIETETVVMRSVTGTVRRVLAEHRQFDKFHLD"
     gene            750..2567
                     /gene="recJ"
                     /locus_tag="VIY07_18235"
     CDS             750..2567
                     /gene="recJ"
                     /locus_tag="VIY07_18235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEY6383731.1"
                     /translation="MATVPAMSLKNPDRHFLGVDQSLTGRAWRDRLDERGSARALTIA
                     QRHGLDELLARVLAGRNVDPDQVDSFLDPTIRQLMPDPNTLTDMDAACVRIADAIVRG
                     ESIAIFGDYDVDGATASALLCRYLHQCGLDPIVHIPDRIFEGYGPNKEAIHSFAERGV
                     KLLITVDCGVTSLEPLGEAKKLGLDTVVIDHHQADEELPIAAAVVDPNRVDDLSGLGH
                     LAAVGLVFLTLVAVTRELRRRSFWNGARSEPDLLSLLHLVALGTVADVVPLHGLNRAF
                     VAKGLIALRRREHPGMTALMDVARLNGPPEPWHLGFLLGPRINAGGRIGRADLGVRLL
                     LEEDPTEAARLASELDRLNRERQQIEQSTLAQAEAEALAALGLEEKGSVVVTAAPGWH
                     PGIVGLVAARLKERYGRPAFAIALEPGGIGTGSGRSIAGVDLGRTVRLALQEGLLLKG
                     GGHAMAAGVTLKKDALAPFRAFLEDKLAEPVEAARRDSALLIDGAVAAGGFNFSLADL
                     MTRAGPFGAGNPEPVLALPAHTLAYAEPLRDNHIRARLRSGDGKFVNAIAFRAMGQAL
                     GKALLDNRDRAVHAAGQIAVDRWQGEERVQMRLVDLAAS"
     gene            2682..2840
                     /locus_tag="VIY07_18240"
     CDS             2682..2840
                     /locus_tag="VIY07_18240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383732.1"
                     /translation="MARNFGLVAKAKALYDPDIETQSDRRELIVTVLGTSLAVLIVGA
                     IAVLMGMA"
BASE COUNT          568 a          888 c         1002 g          594 t
ORIGIN      
        1 gatgccggca cgctactgca cgcgccggat tgctacatgc aaaagatcgc aatcgggccg
       61 ggttattcga agggtacgat cgatctcgac gcgccggccg acgaaaacat cgtaaatctg
      121 gcgcgagcca agggcgtcaa gccatctgaa atcaccgccc tcttgctcga ccgcccgcgt
      181 catgccgaca tcatcgccgc ggtgcgcaaa actggcgccg ctgtcagcct gatcagtgac
      241 ggcgacgtgg cgggcgtgat ccattgcgcc gagccgaaaa cgggcatcga catctaccgg
      301 ggcatcggcg gggcccctga gggcgtgctg gccgcggcgg cactgcgttg catcggtggg
      361 cagatgcaaa caagattgat catcgatacc gaacaactac gggagcgcac gctgcagatg
      421 ggtatcaaag acccgaggcg taagtacgag attgacgata tggtgaaggg cgactgcctg
      481 tttgccgcca ccggggtcac cagcggcgcc atgttgaacg gagtaaaatt cggcaaggac
      541 gtaattgaga ccgaaacggt agtgatgcgc tcggtcaccg gcacggtgcg tcgcgtattg
      601 gccgagcatc ggcagttcga caaatttcat cttgactagt tcgtcgggcg cttgccgaag
      661 cgcctgatca ggtccaccca gtactgcgta tccgttaaac gtgcgattcg ggtccggcgt
      721 gtatggccga gcaccctggt tattgagcca tggcaacggt ccccgcgatg tcattgaaga
      781 atcccgatcg ccatttcctc ggcgtcgatc agtcgttgac cgggcgcgca tggcgcgatc
      841 gtctcgacga gcggggatcg gcgcgggcgc tcaccatcgc acagcgccac gggctcgacg
      901 aattgcttgc gcgcgtcctg gccggacgca atgtcgatcc ggaccaggtc gacagctttc
      961 ttgatcccac catcaggcag ttgatgccgg atccgaatac attgaccgac atggatgcgg
     1021 catgcgtgcg catcgcggac gcaattgtaa ggggcgaaag cattgcaata ttcggcgact
     1081 atgacgtcga cggcgcgact gcatcagctc tgttgtgccg atatctgcat caatgtggcc
     1141 tcgatcccat cgtccacatc ccggatcgca tcttcgaggg ttacggtccg aacaaggagg
     1201 ctatccattc ctttgctgaa cggggcgtaa aattattgat cacggtcgat tgcggggtca
     1261 cgagcctcga accgctcgga gaggcgaaaa aacttggcct cgacactgtt gtgatcgacc
     1321 atcatcaagc cgatgaggaa ttgccgatag ccgccgccgt agtcgacccc aatcgggtcg
     1381 acgacctttc gggccttggc caccttgccg ccgtgggatt ggtgttcctg acgctcgttg
     1441 cagtaacccg tgaactgcgc cggcggagtt tctggaacgg cgcacggagc gagccggacc
     1501 ttctttctct cttgcatttg gtcgcgctcg gcacggtcgc cgatgttgtg ccgctgcacg
     1561 gcctcaaccg cgcctttgtt gcgaaggggt tgatcgcact gaggcggcgc gagcacccgg
     1621 gcatgactgc gctcatggat gtggcgcggc tcaacgggcc acccgagccg tggcatctcg
     1681 ggtttctact ggggccgcgg atcaatgccg gcggtcgcat cggccgggcc gatcttggcg
     1741 tgcggcttct tttggaggaa gacccgaccg aagctgcccg ccttgccagc gaactcgacc
     1801 gtctcaatcg cgagcgccag caaattgagc agtcgacgct cgcgcaagcg gaggctgagg
     1861 cgctcgcagc gctgggcctg gaggagaaag ggtcggtggt tgtcactgcc gcaccgggct
     1921 ggcacccggg gattgtcggt ctcgtggcgg cgcgcctgaa ggagcgctac gggcggccgg
     1981 cttttgcaat tgcgctggag cccgggggga ttggtacagg ttcgggacgc tctatcgcgg
     2041 gggtggacct tggccgcacc gtccgcctcg ccctgcagga agggctgctg ctcaagggcg
     2101 gcggtcatgc aatggccgcc ggggtgacac tgaaaaagga cgcgctggcg cctttccgag
     2161 cctttctcga ggacaagctc gcggagccgg tcgaagccgc gcggcgcgac agcgccttgc
     2221 tgatcgacgg agcggtggcg gccggagggt tcaatttctc cctcgcggat ctgatgacgc
     2281 gcgccgggcc attcggcgcg gggaatccgg agccggttct tgcgcttccg gcgcatacgc
     2341 tcgcttatgc ggagccgctc agggacaatc atatccgcgc acgtcttcgc tccggcgacg
     2401 gcaaattcgt caacgcaatc gcattccgcg ccatgggcca agccctgggc aaagctttgc
     2461 ttgataaccg cgatcgcgcc gtgcatgcag ccggccagat tgcggtcgac cgctggcagg
     2521 gcgaggaacg agttcaaatg cgcctggtgg atttggcggc gagttgatct ccggtccggg
     2581 ccgcgcattg gcgaaagatg atactcttgt tggtcacggg cgattcgtgc gcccaatctt
     2641 tgtgcagcgt gctccggctt tcacgaaaca agggggcgct catggcacgc aatttcggtt
     2701 tggtcgcgaa agcgaaggca ctctacgatc cagacattga aacgcaaagt gatcggcgcg
     2761 aactgatcgt tacggttctc gggacgtcat tggcggtgct gatcgtgggg gcgatcgccg
     2821 tcttgatggg gatggcttag cagccactgg ctttgttggg gcagcgattc cgttctcgac
     2881 gggtccgaac gccttgcgtg cctcagaggc gaactgcctc tgcagagtaa attctgggcc
     2941 gcgagaagcg cgattagcag ccaaaatcaa tgacttttga aaacgggcgg tcgagaggtt
     3001 agagatttgg caacgccctt ggcaacatct agcacggttc gttggtaagg gc
//
LOCUS       DATDHO010000927         4714 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_294831, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000927 DATDHO010000000
VERSION     DATDHO010000927.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4714
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_294831"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="VIY07_18245"
     CDS             <1..571
                     /locus_tag="VIY07_18245"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEY6383733.1"
                     /translation="LPANAANIVDEWASVKPPAAPALKSVTVDPKTTALLMLDFMNQN
                     CGQRPRCLDTIPAMKKLLAEARTHKVPVVYSIIANSTPADVIKDVAPQPDEPHVLSGP
                     DKFRNTDLEKILKDKGVTTVIAVGTSSNGAVLYTGSGAAFRGMNVIIPVDGISAVDPY
                     AEYSAVFTFMNAPQVSAKTTLTRSDMIKF"
     gene            613..996
                     /locus_tag="VIY07_18250"
     CDS             613..996
                     /locus_tag="VIY07_18250"
                     /inference="COORDINATES: protein motif:HMM:NF039360.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6152 family protein"
                     /protein_id="HEY6383734.1"
                     /translation="MLVRRHFIVGCAAIALAGAALFATRGYAHHGWTWAEDENFELTG
                     VIKSAQLGNPHGLLTVTANKEDWTVEVGQPWRNERAGLTDSMLAKGVEATFQGHRAKD
                     KKKRVMKAERIVIAGKLYNLYPDRD"
     gene            1012..1497
                     /locus_tag="VIY07_18255"
     CDS             1012..1497
                     /locus_tag="VIY07_18255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2214 domain-containing protein"
                     /protein_id="HEY6383735.1"
                     /translation="MLIDALTALQDWAPVAALRHSRWTYASVNAAHIIGIALLFGAIV
                     PLDLRLIGWRRTVPIGTMVRVLLPVAIAGLLLAVVAGFALFSVRAVKYAGTGVFQVKM
                     ALLACAVTNALLLKYAAQWEAQQTKVGVAPPPRLQLAGALSILLWLSVIVCGRMIAFV
                     D"
     gene            complement(1521..3917)
                     /locus_tag="VIY07_18260"
     CDS             complement(1521..3917)
                     /locus_tag="VIY07_18260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HEY6383736.1"
                     /translation="MKIVEDSPPVLTALDRPNSYIGRSVPRPNLQRLSQGRGQYVSDV
                     NLPRMAHVAYVRSPHAHARIVKIATEGAKKAPGVIAVVTGPELVKVMTPWVGVLTHLK
                     GLKSAPQSPLAVDRACWQGEAVCAVVARTRAEAEDACELVEVRYEELPPVTDPETALD
                     RKTPVIHASLGDNLCFERKLDVGTVDKALAESDAVVEATFRFGRHTGVTTEPRAVVAD
                     WNEGEQRMTVYHGTQAPHMMQNLFAKHLGLAEHQVRVLTKDVGGSFGIKVHTYADEMA
                     TVGLSKLLKRPVKFVADRIESFVTDIHARDHRINAKIGVSKDGTINAFEIDDLTGIGP
                     YSVYPRTSGIEANQIVNLTGGPYKCPNYRAQARVVFQNKNVMCQYRAVGHPIAVAVTE
                     GLVELAAVKIGMDPLELRRRNLVPDDAYPTQSASGLKFELLSHHEALAHLDSMMNYAG
                     LRAEQKRLREKGIYRGIGFASFIEVTNPSAAFYGVGGARITSMDGATVKLDAQGAIIV
                     HTGVTEQGQGAEAVVAQCVASSFGVPIEKVRVVTGDTDNTPYGGGTWASRAAGIGGEA
                     AWQAGKALRSNVVAVAASILQAKPEDLDIRNGTVVDKQTGTERLPLDELARVAYFRPD
                     TLPPGFQAELMVTRHYVPRAWPFAFTNGIQGSYLEVDTDTGFVKLLKHWCVEDCGTII
                     NPQLVDEQIRGGVVQGIGAALFEHCLYDERGQMLNGNMADYLVPMAAEMPDIECGHVV
                     SPTADSELGAKGAGEAGTAGAPGSVMNAINDALRPLGAQPLTDMPFTPDKILRALGKV
                     "
     gene            complement(3932..4699)
                     /locus_tag="VIY07_18265"
     CDS             complement(3932..4699)
                     /locus_tag="VIY07_18265"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY6383737.1"
                     /translation="MNEHAHPKSVAERADELEEEKMHEMERILTKSTIAHLMDGEVKM
                     DTSPEMRAKYPGKFFLMGDDPRLPPMPQKPTLVDYFRHRFASTAHLLQSATHALKGGQ
                     PEKVVLACLLHDIAIVSFIRCDHGYWGAQMIEPYVDEEVAWAVKTHQALRFFPDESVG
                     YGYPDLYKELFGPGYKPEPYIVDEYQRARKHKWYMTSRLICVNDIYSFDPNAKVNLDD
                     FVDIIGRNFKQPKEGLGLDNSPSAHMWRTILWPTRFL"
BASE COUNT          879 a         1420 c         1450 g          965 t
ORIGIN      
        1 gctccccgcg aatgcagcca atatcgtcga cgaatgggcc agcgtgaagc cgccggccgc
       61 gccggcgctc aagtcggtca cggttgatcc gaagaccacc gcgttgttga tgctcgattt
      121 catgaaccag aattgcggcc agcggccacg ctgccttgat actattccgg cgatgaagaa
      181 gctgctcgcc gaggcgcgca ctcacaaagt gcccgtggtt tattcgatca tcgccaacag
      241 cacgccagcc gatgtgatca aggatgtggc gccgcagcct gatgaaccgc atgtcctttc
      301 gggtcccgac aagtttcgca acacggatct cgagaagatt ttgaaggaca agggcgtcac
      361 cacggtgatc gcggttggca cttcatcgaa tggtgcggta ctctacacag gcagcggggc
      421 agcgtttcgc ggcatgaacg tgattattcc ggtcgatggc atctcggcag tcgatcctta
      481 cgccgaatac tccgctgttt tcacgttcat gaatgcgcca caagtttcag caaaaactac
      541 gctaaccaga agtgatatga tcaagttctg agaagccgag ttctgaggaa ctttgagcaa
      601 caggagatac cgatgcttgt gagacgccac tttatagtgg gctgcgcagc aattgcgctg
      661 gcgggggccg ccctgttcgc cacacgcggg tacgctcatc acggctggac ctgggcggag
      721 gacgaaaatt ttgagctgac cggcgtgatc aaatcggccc agctcggaaa cccgcacggc
      781 ctgctcaccg tgaccgctaa taaagaggat tggaccgtcg aggtcggcca gccgtggcgc
      841 aacgagcgcg ccgggttgac ggattcaatg ctggccaaag gtgtcgaagc gacgttccag
      901 ggtcatcgcg cgaaggataa gaagaagcgg gttatgaagg ccgagcgcat cgtaatcgca
      961 ggcaaacttt ataacctgta tccagacagg gactgatccc gagtcgttgc tatgctgatc
     1021 gatgcgctca cggcgctgca agactgggcg ccggtcgccg ccctgcggca ttcgcgctgg
     1081 acctatgcct cggtcaacgc tgcccacatc attggcattg cgctgctgtt cggggcgatc
     1141 gtgccgctcg atctgcggtt gatcggatgg cggcgcactg tgccgatcgg gaccatggtc
     1201 cgcgtcctgc tgccggtcgc gatcgcgggc ctcctgctgg cggttgtcgc cggatttgcg
     1261 cttttttctg tccgcgcggt caaatatgcc ggcaccggag tgtttcaggt aaaaatggcg
     1321 ctcctcgcct gcgcggtgac caatgcgctc ctgttgaaat acgccgcgca atgggaggca
     1381 caacagacaa aagttggggt cgcgccgccg ccgcgcctgc agctcgcggg cgcgctgtcg
     1441 atcctgctct ggctctcggt catcgtctgt gggcgtatga tcgccttcgt ggactagcgt
     1501 cagccgccga tttttccgat ctagaccttc cccaacgcgc ggagaatctt gtcaggcgtg
     1561 aacggcatgt cggtgagcgg ttgcgcgccc agcggacgca gcgcgtcatt gatcgcgttc
     1621 atcaccgatc ccggggcgcc ggcggtgccg gcttcgcccg cgcccttcgc gccaagttcg
     1681 ctgtcggccg tgggcgagac cacatgacca cactcgatgt ccggcatttc cgccgccatc
     1741 gggaccagat agtcggccat gttgccattg agcatctggc cgcgctcatc gtacagacaa
     1801 tgctcgaaca gcgccgcgcc gatgccctgc acgacgccgc cgcgaatctg ctcgtccacg
     1861 agctgcggat tgatgatggt gccgcaatct tcgacgcacc agtgcttgag aagcttcacg
     1921 aagccagtgt cggtatcgac ttcgagatag ctgccctgaa tgccattggt gaaagcgaag
     1981 ggccacgcac gcggcacgta atggcgcgtc accatcagtt ccgcctgaaa tccgggcggc
     2041 agcgtgtccg gccggaagta ggctacgcgc gccaactcgt cgagcggcag tcgctcggtg
     2101 cccgtttgct tgtcgacgac ggtgccgttc cggatgtcga gatcctcggg cttggcctgg
     2161 aggatcgaag cggcaacggc gacgacattg gaccgcagtg ctttgccggc ctgccacgcg
     2221 gcctcgcctc cgatgccggc cgcccgcgac gcccaggtgc cgccgccgta gggcgtattg
     2281 tcggtgtccc ccgtaaccac gcgcaccttt tcaatcggta cgccgaatga cgaggcgacg
     2341 cattgcgcca ccacggcctc cgcgccctgg ccctgctcgg tgacgccggt atgcacgatg
     2401 atcgcgcctt gggcatcgag cttcaccgtg gcgccatcca tcgaggtgat gcgagcaccg
     2461 ccgacaccgt agaaggcagc ggacggattg gtaacttcga tgaagctggc aaagccaatg
     2521 ccgcgataaa ttcctttttc gcgcagcctt ttttgttcgg ctcgcaggcc ggcatagttc
     2581 atcatcgagt cgaggtgagc caaagcctcg tgatgcgaaa gcagttcgaa cttgagaccc
     2641 gaggcggatt gagtcgggta ggcgtcgtca gggacaaggt ttcgccggcg caattccagc
     2701 ggatccatgc caatcttcac ggcggcgagt tcgaccagac cttcggtgac tgccaccgcg
     2761 atcggatgcc cgaccgcgcg atattggcac atgacgttct tgttctggaa aacgacgcgg
     2821 gcctgcgcgc gatagttcgg gcatttgtag gggccgccgg tcaggttgac gatctggttc
     2881 gcttcgatgc cgctggtgcg gggatagacg gagtaaggac caatcccggt cagatcatcg
     2941 atctcgaagg cgttgatggt gccgtccttg ctcacgccga tcttcgcatt gatgcgatga
     3001 tcgcgggcgt ggatgtcggt gacaaagctt tcgatacggt cggcgacgaa tttcaccgga
     3061 cgcttgagca gttttgacaa cccaaccgtc gccatctcgt cggcataagt gtgcaccttg
     3121 atgccgaacg agccgcccac gtccttggtc agcacgcgca cctggtgctc ggcaagccca
     3181 agatgcttgg cgaacagatt ttgcatcata tgtggcgcct gcgtgccgtg atagacggtc
     3241 atgcgctgct cgccttcgtt ccagtcggcg accacggcac ggggctcggt ggtcacgccg
     3301 gtgtggcggc cgaaacgaaa tgtagcctcc accaccgcat cggattcggc gagcgccttg
     3361 tccaccgtgc caacatcgag cttccgctca aagcagagat tgtcgccgag cgaggcatga
     3421 attaccggcg tcttgcgatc cagtgccgtt tcagggtcgg tcacaggcgg caattcttcg
     3481 tacctcacct cgaccagttc gcaagcgtcc tcggcctcgg cgcgcgtgcg ggcaacgacc
     3541 gcgcaaaccg cttcgccctg ccagcaggcg cgatccacgg ccagaggtga ctgcggcgcc
     3601 gatttcaggc ccttgagatg ggtaagtacg cccacccacg gggtcatgac cttgacgagc
     3661 tcgggtccgg taacaacggc aatcacgccc ggcgcctttt ttgcgccttc ggtggcaatt
     3721 ttgacgatgc gcgcatgagc gtgcggcgag cgcacataag cgacgtgggc catgcgcggc
     3781 agattgacat cgctgacata ttgcccgcga ccctgcgaga gccgctgcaa atttggccgc
     3841 ggcaccgagc ggccgatgta ggagttcgga cgatcgaggg cggtcagcac aggcggggaa
     3901 tcttcgacga ttttcatgtc tacttgatct ctcacaggaa ccgtgtcggc cacaggattg
     3961 tgcgccacat gtgcgccgag gggctgttgt cgagcccgag cccttccttc ggctgcttga
     4021 agttgcgtcc aatgatatcg acgaagtcgt cgagattgac cttggcgttc ggatcaaacg
     4081 aatagatgtc gttcacgcaa atcaagcgcg aggtcatgta ccatttgtgc ttccgcgcgc
     4141 gctggtattc gtcaacgata taaggctccg gtttgtagcc cggcccaaac agctctttgt
     4201 aaaggtcggg ataaccatag ccgaccgact cgtccgggaa gaagcgcagc gcctggtgcg
     4261 tcttcaccgc ccaggcgact tcctcgtcca catacggctc aatcatctgc gcgccccagt
     4321 agccatggtc gcagcggatg aaactgacga tggcgatgtc gtgcagcagg caggccaaca
     4381 cgaccttttc cggctggccg cccttcaatg cgtgcgttgc gctttgtaac aggtgagctg
     4441 tcgaggcaaa gcgatggcga aagtagtcca ccaacgtggg cttttgcggc atcggcggca
     4501 ggcgggggtc gtcgcccatt aaaaagaatt tgcctgggta tttggcgcgc atctccgggc
     4561 tggtgtccat tttcacctcg ccgtccatca gatgcgcgat ggtcgatttt gtgaggatgc
     4621 gctccatctc atgcatcttt tcttcttcga gctcgtcggc gcgctcggcc acggatttcg
     4681 gatgggcgtg ttcattcata gcttaccttc cctt
//
LOCUS       DATDHO010000928         7009 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_392912, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000928 DATDHO010000000
VERSION     DATDHO010000928.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7009)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7009)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7009
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_392912"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..917
                     /locus_tag="VIY07_18270"
     CDS             <1..917
                     /locus_tag="VIY07_18270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098024 - virus tail, fiber [Evidence
                     IEA];
                     GO_process: GO:0019062 - virion attachment to host cell
                     [Evidence IEA];
                     GO_process: GO:0046718 - viral entry into host cell
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HEY6383738.1"
                     /translation="GGNYWGGGVNWGNNNINVNRPVNINTGGNNWNHNVDHRHGVRYN
                     NKDVANKFNKGNNIRGGANNRMDFRGHDGKQALRPGGDGRPGGGDRPGAGDRPGGGDR
                     PGAKGGDRPGAKGGDRPGAKGGGQKKDVASRGSGQKKAAAQRGGGGGGRNAFAGSGGG
                     RNAMAQASRGHASLGGRGGGGGPRMGGGGGGPRMGGGGGRGGGGGGGRGGGGGRRSDI
                     ALKHDITLLGHLNNGLGYYRFAYNGSDKTYVGVMAQEVQTIRPDAVTRGHDGYLRVNY
                     DRLGLQFQTYDRWIVSGARVPTRASGSH"
     gene            929..1873
                     /locus_tag="VIY07_18275"
     CDS             929..1873
                     /locus_tag="VIY07_18275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2950 domain-containing protein"
                     /protein_id="HEY6383739.1"
                     /translation="MMKSKSQQVRFLSKLALLTGTTVLALLLSSLAHAQQKFNTPDAA
                     VEALVAAARSGDRRTVVSILGPGSQELVSSGDPVEDENIKKEFLTSYDAQHRIVSESG
                     KPSVLVVGLNDWPFPIPLVQRDGQWSFDTAAGREEILARRIGRNELGAMKASLAYWDA
                     QNEYADMFKDKNGMAVYAQKIVSSPGKKDGLYWPTSGSEPDSPLGEAVAAATQRGYRV
                     GAGEPYHGYYFRILTSQGANAPGGAVDYVVRGNMIGGFGLIAYPAEYGNSGIMTFIIN
                     NDGDIYEKDLGPRTERIASRMSSYNPDHTWRKVVDTEK"
     gene            1958..2203
                     /locus_tag="VIY07_18280"
     CDS             1958..2203
                     /locus_tag="VIY07_18280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3302 domain-containing protein"
                     /protein_id="HEY6383740.1"
                     /translation="MGMIDVFAWIVLLILVASAIAIFFIAGSLPGHIAKSRGHPWAQA
                     VTIAGWVTLIFGFALWPIALIWAYVDIPAARKAEAPR"
     gene            2200..3141
                     /locus_tag="VIY07_18285"
     CDS             2200..3141
                     /locus_tag="VIY07_18285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HEY6383741.1"
                     /translation="MIVALFNVYLVILYFLVKFKIVPFNLFWKVSPLLVLLLLMFGLF
                     IPMGWGAPQGPAMVVRNSVAIVPDVAGEVTEVPVSPNKPLKAGDVLFKIDPTPYQAQV
                     DTIAAQLKFEELRLAQMTQLQLSDAGRAFDVQQRQADVDKLKGQFEGAKWNLEKTVQL
                     APANGYVTNVGLMKGARVANLPLSPVMAFIDTSQTVVGVEIQQIYTRYIEPGQEVEVT
                     FKFYPGQVFTGKVESVLEATSSGQVLATGTAVTPKQVTAAPFVVRVKLDDDKLASSLP
                     AGTVGDAAIYTLHIKPSHIIRKVILRQIAIVNYVNPF"
     gene            complement(3305..3487)
                     /locus_tag="VIY07_18290"
     CDS             complement(3305..3487)
                     /locus_tag="VIY07_18290"
                     /inference="COORDINATES: protein motif:HMM:NF016231.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HEY6383742.1"
                     /translation="MLQTDIAILEQRRRALEKEIGEALSHAPVDDPMIAYLKSRILYV
                     KEEISRLRHEAFVWSH"
     gene            3604..3915
                     /locus_tag="VIY07_18295"
     CDS             3604..3915
                     /locus_tag="VIY07_18295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HEY6383743.1"
                     /translation="MVKGYWIVSVDISNPESHKMYVAETRSALRKYGARFVVRGGKSE
                     VVEGKGRSRIVVIEFRDYATALECYRSPEYAKAIEIRQGSSVADIIIAEGYHGPQPMD
                     G"
     gene            4077..5450
                     /locus_tag="VIY07_18300"
     CDS             4077..5450
                     /locus_tag="VIY07_18300"
                     /inference="COORDINATES: protein motif:HMM:NF018561.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1214 domain-containing protein"
                     /protein_id="HEY6383744.1"
                     /translation="MKVRFALCVLIAVVSGVADVRAQTVRVTDRDIVEAYQYMLGRWL
                     VLRQENLDFKDGMKWNQIVHRDPGGVDWANPNLDVVYSEAWVAVDEKSCTLIELPEIK
                     GRYYTVQALNGWGEVTANINERNYPKHPSGKFAFCLKGAKGIMLPKGTQRVDLPSRKS
                     RILMRIELGPNPADAVTLQKKVTMKATGSPLIEPAVVKPDFPNSKLPGVEGFDKTEEI
                     LASDADLNVGMIDVRDKTRAVAKAAADPAQRARIDEVIRKYAIPAFQGEIQKMGKVAN
                     GWTRPRLIGNYRTDYVMRSIANYIGIWANNSKEVVYFAGQGLDGGQTYTQSYPKEALP
                     LSKTRYFWSVIAVDGVDFKVIPNPLKRYLLNKQSALKLNDDGSLTLAFGPKQPDGIPE
                     SNWIPTPTGKKYNLTYRFYGPSKDVSDGTYYPPPLVRISETQTEKFIHGLKKSTEDVI
                     RRRKKNE"
     gene            5443..6468
                     /locus_tag="VIY07_18305"
     CDS             5443..6468
                     /locus_tag="VIY07_18305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1214 domain-containing protein"
                     /protein_id="HEY6383745.1"
                     /translation="MNRAVLAGVFLACGMIGASQAQSPPGKAVTVTADNFNRAETDMY
                     FAQFVKRGALGKFVHLRELPLEGTGVRPNRDTLYSEAVFDLDAGPVKITLPKPGKRFM
                     SITAINENHYIFEVGYGSGNYTYTRSEVGTRYLFVALRILVNPADAQDVKQAHALQDA
                     VVVKQKDPGRFEIANWDPVSHKKVRDLLLALNTTLPDLQKAFGSRTQVDAVRHLIATA
                     SAWGGNPEKDAMYLNVTPAKNDGATIYKLNVPAKVPVDAFWSVSVYDATGHFRKNPYN
                     AYSFNSLTAKKSPDGSVAIQFGGCDGKIPNCLPTVTDWNYMVRLYRPRDEVLNGKWKF
                     PEARQVN"
     gene            6656..>7009
                     /locus_tag="VIY07_18310"
     CDS             6656..>7009
                     /locus_tag="VIY07_18310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenol degradation protein meta"
                     /protein_id="HEY6383746.1"
                     /translation="MKPIAFLAALAISAPQNASADEGGVSFWVPGFFGSLAATPQQPG
                     WTNAFIFYHTSVSAGGDVAFARQVNRGNLNVNFSGNLNANIDADANLGMWAPSYVFKD
                     PFLGGQAALALLVPFG"
BASE COUNT         1536 a         2068 c         2135 g         1270 t
ORIGIN      
        1 ccggtggaaa ttactggggt ggcggcgtca actggggcaa caacaacatc aacgtcaatc
       61 gcccggtcaa catcaacacc ggcggcaaca actggaatca caacgtcgat catcgacacg
      121 gcgttcgcta caacaacaag gacgtcgcca acaaattcaa caagggcaac aacatccgcg
      181 gcggcgcgaa taaccgcatg gatttccgcg ggcacgacgg caagcaggcg ctacgtcccg
      241 gcggcgacgg ccgtcccggt ggcggcgacc ggccgggcgc cggcgatcgc cccggcggcg
      301 gtgatcgccc tggagccaaa ggcggcgatc gccccggagc caaaggcggt gatcgccctg
      361 gcgcgaaggg cggcggccaa aagaaggatg tagcctcgcg cggttccggt cagaaaaaag
      421 ccgcagccca gcgcggcggc ggcggtggcg gacgcaatgc cttcgccggc agcggaggtg
      481 gtaggaacgc gatggcgcaa gcgtcgcgcg gccacgcaag cctcggcgga cgtggcggtg
      541 gtggcggccc acgcatgggc gggggcggcg gcggaccgcg catgggaggt ggtggtggcc
      601 gcggcggcgg tggcggtggc ggacgcggcg gtggcggcgg acgacgctcg gatatcgcgc
      661 tcaagcacga catcacgctt ctcggccatc tcaacaatgg tctcggatat taccgcttcg
      721 cctacaacgg cagcgacaag acttatgtcg gcgtgatggc gcaggaagtg cagaccataa
      781 ggccggatgc ggtcacgcgc gggcacgacg gctatctgcg tgtcaactac gaccggctcg
      841 gtctgcaatt ccagacttac gaccgatgga tcgtgtcggg tgcccgggtg ccaacgcgcg
      901 cttcaggctc gcactgagag gtgacgccat gatgaaatcg aaatcacagc aggttcgttt
      961 cctgagcaag ctcgctctgt tgactggcac gaccgtgctt gcactgctcc tgtcatcact
     1021 ggctcacgcc cagcaaaaat tcaacacgcc cgacgctgcc gtcgaagcgc ttgtcgccgc
     1081 ggcgagaagc ggcgaccgca ggacggtcgt atcgatactc gggccaggct cgcaggaact
     1141 cgtttcctcc ggcgacccgg tggaggacga aaacatcaag aaggaatttc tcacctccta
     1201 tgatgcgcaa catcggatcg tgtcggagag cggcaagccg tcggttcttg tggtcgggct
     1261 gaacgactgg ccattcccga taccgctcgt gcagcgcgac ggccagtgga gcttcgacac
     1321 cgccgcgggc cgcgaggaga tccttgcccg ccgcatcggc cgcaacgagc ttggagcgat
     1381 gaaggcgtcc ctcgcctatt gggacgcgca gaacgagtac gccgacatgt tcaaggacaa
     1441 gaatggcatg gcggtttacg cgcagaagat cgtcagttcg cccggtaaaa aggacggcct
     1501 gtactggccg acgtcgggca gcgagcccga cagtccgctc ggtgaggcgg tggctgccgc
     1561 aacccagcgg ggctatcgcg tcggcgccgg agagccctat cacggctact acttcaggat
     1621 cctgaccagc cagggcgcga acgcacccgg cggcgccgtg gattatgtcg tgcgcggcaa
     1681 catgatcggc ggcttcggtc tcatcgccta tcccgccgag tacggcaact ccggcatcat
     1741 gactttcatc atcaacaatg acggcgacat ctatgaaaaa gatctgggac cacggacaga
     1801 gcggattgcc tcgcgcatga gctcgtacaa tccggaccat acctggagga aagtcgtcga
     1861 caccgaaaaa taagtctacc gccagcgata gcacgcccgc gggcggcact gacgtgaaag
     1921 cggtcccgcc ctgagtttcg cgcgttacag ggagggactg ggtatgatcg acgtttttgc
     1981 ctggatcgtg cttctcatcc tggtcgcgag cgcgatcgcg atctttttca tcgcgggctc
     2041 gctgcccggc catatcgcca aaagccgcgg acacccctgg gcgcaggccg tcaccatagc
     2101 gggatgggtc acgttgatct tcggctttgc gctgtggccg atcgcactga tctgggccta
     2161 tgtcgacatt cccgcggccc gcaaggcgga ggcgccgcga tgatcgtcgc cctcttcaac
     2221 gtttacctgg tgattctcta cttcctcgtg aagttcaaga tcgttccctt caacctgttc
     2281 tggaaggtct ctccgctcct cgtccttctg cttctgatgt tcggcctgtt tatcccgatg
     2341 ggatggggtg ccccgcaagg ccccgcgatg gtcgtccgca attcggtggc gatcgtgcct
     2401 gacgtcgccg gcgaagtaac ggaagtgcct gtgagcccga acaagcccct caaagctggc
     2461 gatgtcctgt tcaagatcga tccgacgccc taccaggccc aggtcgacac gattgccgcg
     2521 cagctcaagt tcgaagaact gcggcttgcc caaatgaccc agctccagct cagcgacgca
     2581 ggacgcgcgt tcgacgtcca gcagcggcag gcggatgtgg acaagctgaa ggggcagttc
     2641 gaaggcgcca aatggaacct tgagaagaca gtccaactcg cgccggccaa cggctacgtt
     2701 accaatgtcg ggctgatgaa gggcgcgcgc gtcgcaaacc tgccactgtc tcccgtgatg
     2761 gcattcatcg atacgtccca gacggtggtc ggggtcgaaa tccagcagat ctacacccgg
     2821 tacatcgagc cgggccagga ggtcgaagtc acattcaagt tttaccccgg ccaggtgttc
     2881 accggcaaag tcgagtctgt gctggaagcg acgtcctccg gccaggttct cgctaccggc
     2941 actgctgtca cgccgaaaca ggttacggcg gcgccattcg ttgtgcgcgt caagcttgat
     3001 gacgacaagc ttgcctcaag cctgccggcc ggcaccgtcg gcgatgcggc gatttacacg
     3061 ctgcacatca agccgagtca tatcattcgc aaggtgatcc tgcggcagat cgcgatcgtg
     3121 aactacgtca acccgttttg aacgacaggt cgcaatagac tggaggacgc actctatggg
     3181 ccgaagaagg attttttcga caaggtctgg caggctgcct gacgtcgaga aggtcgcggc
     3241 gcggcaagga ggacagcggg agtatgcaat ggcaatgggc ggggcacgca acagcagatc
     3301 aaattcaatg ggaccaaaca aaagcttcgt gacgaagacg actgatttct tccttgacgt
     3361 acaaaattcg agatttgagg taggcgatca tcggatcgtc gacaggcgca tgggagagag
     3421 cctcgccgat ttccttctcg agggcccttc gtcgttgttc gagtatcgca atgtcggttt
     3481 gcagcatgat gcttctccga cttcgttagg attgtcagga aaatcagtta acgaatcatt
     3541 aacatggctt cgagcgccgg gatgtagcaa atgggccaca acgcgaattg aaatgggcat
     3601 gcgatggtaa aaggctattg gattgtatcg gtcgatatca gcaaccccga aagccacaag
     3661 atgtacgttg ctgaaacccg aagcgctttg cgcaaatacg gagcccgttt tgtcgttcgg
     3721 ggcggcaagt cggaggtggt tgaaggcaaa ggacgatcac gaattgtggt gatcgagttc
     3781 agggactacg caaccgcgct cgaatgctac cgatcacccg agtacgccaa agccatcgaa
     3841 attcgtcagg gcagttccgt ggccgacatt attatcgccg agggctatca cggaccgcag
     3901 ccgatggatg gatagaattc actgaaaaga cgccggatcg gtaagtcagc ttcggcccaa
     3961 tctagcaatg ccggccggat tgcattccag gttccggcaa ataatggcct gaactttcct
     4021 ggatgcagcg gataaactaa gcggactcgt ccggggaacg aaacggggga cgtgggatga
     4081 aagtcaggtt cgcactttgc gtattgatcg cggtggtgtc tggagtcgcg gatgttcgcg
     4141 cgcagacggt gcgcgtcacc gatcgcgata tcgtcgaggc ctaccaatac atgctcggcc
     4201 gctggctggt gctaaggcaa gagaacctcg acttcaagga cggcatgaaa tggaaccaga
     4261 tcgtccaccg cgaccctggc ggcgtggatt gggcaaatcc gaacctcgac gtcgtctaca
     4321 gcgaggcatg ggtcgccgtc gacgagaaga gctgcactct gatcgagctg ccggagatca
     4381 agggtcgcta ctacacagtg caggcgctca acggctgggg cgaagtcacc gccaacatca
     4441 atgagcgcaa ctacccgaag cacccgtccg gaaagttcgc tttttgcctg aagggcgcaa
     4501 aagggatcat gctcccgaag ggcacgcagc gcgtcgatct tcccagcagg aagtcgcgca
     4561 ttttgatgcg aatcgaactt ggccccaatc cggccgatgc cgtcacgctg cagaaaaagg
     4621 tcacgatgaa ggccaccggc tcccccctga tcgagcccgc ggtggtgaag ccggactttc
     4681 ccaacagcaa gctgccgggc gtcgaaggct tcgacaagac cgaggagatc ctcgcgagcg
     4741 atgccgatct caacgtcggc atgatcgatg tgcgcgacaa gacgcgcgcg gttgccaagg
     4801 cggcggccga tccggcccag cgcgcgcgca tcgacgaggt gattcgcaaa tatgcgatcc
     4861 cagccttcca gggcgagatt cagaaaatgg gcaaggtagc gaacggttgg acccgtccgc
     4921 gcctcatcgg caactaccga acggattacg tgatgcggag catcgccaac tacatcggca
     4981 tatgggccaa caacagcaag gaagtggtgt acttcgccgg ccagggtctc gacggcggcc
     5041 agacctacac gcaaagctat ccgaaggagg cgctgccact ctcgaagacg cgctactttt
     5101 ggtcggtcat tgcggtcgat ggcgtcgatt tcaaggtcat tcccaatccg ctcaaacgct
     5161 acctgctcaa caagcaatcg gcgctgaaac tcaacgatga tggctcgctt acgctggcgt
     5221 ttgggccgaa acaacccgac ggcattccgg aatcaaactg gatacccacg ccaaccggca
     5281 aaaaatacaa cctgacctat cgcttctacg gaccgtcgaa agacgtgtcc gatggcacgt
     5341 attacccgcc gccgctggtg cgcatcagcg aaacgcagac ggaaaaattc atccacggcc
     5401 tgaagaaatc gaccgaagac gtgatacggc ggagaaagaa aaatgaatag agcggttctc
     5461 gcaggcgtct tcctggcttg cggcatgatc ggagcatcgc aggcgcagtc gccgcccggc
     5521 aaagccgtga cagttacggc cgacaatttc aaccgcgccg agaccgacat gtatttcgcc
     5581 cagttcgtca agcgcggggc gctcggcaag ttcgtccatc tccgcgagtt gccgctggaa
     5641 ggcaccggcg ttcggccaaa ccgtgacacg ctttattcgg aggccgtgtt cgacctcgat
     5701 gccgggccgg tcaagatcac cctgcccaag ccgggcaagc gcttcatgtc gatcacggcg
     5761 atcaacgaga accattacat cttcgaggtc ggctatggca gcggcaacta cacttacacg
     5821 aggtccgagg tcggcacgcg ctacctgttt gtggcgctgc gcatcctggt caatccagcc
     5881 gatgcgcagg atgtgaaaca ggcacatgct ttgcaggacg cggtggtcgt gaagcagaag
     5941 gatcccgggc gcttcgaaat cgccaattgg gatccggtga gtcacaagaa ggttcgcgat
     6001 cttctgctgg cgttgaatac gacgctgcct gacctgcaaa aggcgttcgg atcgcgaacg
     6061 caggtcgatg cagtccgaca cctgatcgcc actgcgtcgg catggggcgg caatcccgaa
     6121 aaggatgcga tgtacctcaa cgtcacgcca gccaagaacg acggcgccac gatttacaag
     6181 ctcaatgtcc ctgcaaaggt gcccgtcgac gccttctggt ccgtcagtgt ctacgacgcc
     6241 acgggccatt tcaggaagaa cccgtacaac gcctactcat tcaacagcct taccgcgaag
     6301 aagagccccg acggctcagt cgccatccag ttcggcggct gcgacgggaa gatcccgaat
     6361 tgcctgccca ccgtgacgga ctggaactac atggtgcggc tctatcgtcc acgagacgag
     6421 gtcctgaacg gcaaatggaa atttcccgaa gcgcggcagg tgaattgaag ccggggtacg
     6481 cccataccgt atgtgttgcc aaaatgctga cgtgcaaatc aaaatttgca aaacgtggga
     6541 ccgcgaattg agcgccttgt aaccgtctca taaagttgcg ctattgcgga atggtatctg
     6601 ggacaccatc agactgacca cgattgcgaa gcgcccgtgc gctcaatttt gcattttgaa
     6661 accgatcgct ttccttgccg cgctggccat ttcagccccg caaaatgcgt ccgcagatga
     6721 aggcggcgtg agcttctggg tgccgggctt tttcggaagc ctggcggcaa ccccgcaaca
     6781 acccggctgg acgaatgctt ttatttttta ccacacgtcc gtatccgctg gtggcgatgt
     6841 cgcttttgcg cgccaggtca atcgcggcaa tctcaacgta aacttcagtg gaaacctgaa
     6901 cgcgaacata gacgcggacg caaacctcgg catgtgggcg ccgagctacg tcttcaaaga
     6961 cccgttcctc ggcggacaag cggccctggc gctgctggtg ccgtttggc
//
LOCUS       DATDHO010000929         2567 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_443086, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000929 DATDHO010000000
VERSION     DATDHO010000929.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2567)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2567)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2567
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443086"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1203
                     /gene="lepA"
                     /locus_tag="VIY07_18315"
     CDS             <1..1203
                     /gene="lepA"
                     /locus_tag="VIY07_18315"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HEY6383747.1"
                     /translation="DSWYDLYLGVVVLVRIVDGVLKKGQRIRMMGTSASYDVDRTGVF
                     TPKLQPVDELGPGEIGMLTASIKEVADTRVGDTITDDRHPVDKALPGFRPAVPVVFCG
                     LFPVDAAQFEDLRAAMGKLRLNDASFTYEMETSAALGFGFRCGFLGLLHLEIIQERLS
                     REFNLDLIATAPSVIYKIKLSNGKELEIHNPVDMPDPNHIEEMQEPWIEATILTPDEF
                     LGSVLKLCQDRRGEQKELTYVGNRAMVKYNLPLNEVVFDFYDRLKSVSRGYASFDYHL
                     TDYRPADLVKLQMLVNGEPVDALAMLVHRTRAESRGRAMAEKLKELIPPHMFQVPIQA
                     AIGGKIIARETVRAFRKDVTAKCYGGDATRKRKLLEKQKEGKKRMRQFGKVDIPQEAF
                     IAALKVDV"
     gene            complement(1240..1782)
                     /locus_tag="VIY07_18320"
     CDS             complement(1240..1782)
                     /locus_tag="VIY07_18320"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HEY6383748.1"
                     /translation="MRAVSALFGLILLLASEPAGAGIVVTVDKSAQRLTVEVDGSSRY
                     RWPVSTGRWGYNTPNGSYRPQWLARKWFSRKYDWSPMPYSIFFNGGYAIHGSYEVSRL
                     GRPASHGCIRLHPKNAAVLFALVQDRKDDTSIVVTGQAPVQRERIREESSPDYSGRGF
                     EDNFDNPWGGYRAYPNWQWR"
     gene            1936..>2567
                     /locus_tag="VIY07_18325"
     CDS             1936..>2567
                     /locus_tag="VIY07_18325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014891612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HEY6383749.1"
                     /translation="MFARIVISSVLSLAAAVGTLAAQRNAIAQTAAVAEPAPLPLPPP
                     KPAMTEQEKEKSLTAKQLFGAVQLPSIGKTVAIGHYHRGCLAAGVEFPINGPNWQVMR
                     VSRNRNWGHPSLIRFLEKFAPAAAKATGWNGILVGDLAQPRGGPSPSDHASHQTGLDV
                     DIWFLPMPDRVLTKEERDTISAINLVSDDWKSLNPETWTPQHVAFIKAAA"
BASE COUNT          541 a          773 c          772 g          481 t
ORIGIN      
        1 gacagctggt acgacctcta tctcggcgtg gtggtgctgg tgcgcatcgt cgacggcgtt
       61 ttgaagaagg gccagcgcat tcgcatgatg ggcaccagcg cctcatacga cgtggatcgc
      121 accggtgtct tcactcccaa gcttcagccg gtggatgaac tcggtcccgg cgaaatcggc
      181 atgctcacgg cgtcaatcaa ggaagtggcg gatacccggg tcggcgacac cataaccgac
      241 gatcgccatc ccgtggacaa ggcgttgccc ggctttcgtc ctgctgtgcc cgtcgtgttt
      301 tgcgggctct tccccgttga cgccgcacaa ttcgaggact tgcgcgcggc gatgggcaag
      361 ctgcgcctca acgatgcgag ttttacctac gagatggaga ctagcgctgc cctcggcttt
      421 gggttccgtt gcggcttcct ggggctgctg catcttgaga tcattcagga acgcttgtca
      481 cgggagttca acctcgacct gatcgcgacc gcgccatccg tcatctacaa gatcaagctg
      541 agcaacggca aagagctcga gattcacaat ccggtcgaca tgccggatcc aaatcatatc
      601 gaggagatgc aggagccctg gatcgaggcc acgatcctga cgcctgatga atttctcggc
      661 tcggtcctca agttgtgcca ggaccgccgc ggcgagcaga aggagctcac gtacgtcggc
      721 aaccgcgcaa tggtgaaata caatttgccg cttaacgagg tggtgttcga tttctatgac
      781 cggctgaagt cggtgtcgcg cggatacgcc tcgtttgatt atcatctgac cgactacagg
      841 ccggccgacc tcgtgaagtt gcagatgctg gtcaacggcg agccggtcga tgcgctggcg
      901 atgctggtgc accggacccg cgcggaaagc cgcggccgcg ccatggcgga aaagctgaag
      961 gagctgattc ctccgcacat gttccaggtt ccgatccagg ccgcgatcgg cggcaagatc
     1021 atcgcgcgcg agaccgtgcg cgcctttcgc aaggacgtca ctgcaaagtg ttacggcggc
     1081 gacgcgacgc ggaagcgcaa gcttctggag aagcagaagg aaggcaaaaa acgcatgcgg
     1141 caattcggca aggtcgacat tccgcaggaa gcgttcatcg ccgcgctgaa ggttgacgtc
     1201 taggcaggag cctccacggc gtacgcgccg ctcaggacac taacgccact gccaattcgg
     1261 gtatgcgcga tagccacccc aagggttatc gaaattatct tcgaagccgc ggccggaata
     1321 gtcgggcgaa ctttcctcgc gtatgcgttc ccgttgcacc ggggcttggc cggtaacaac
     1381 gatactcgtg tcgtccttac gatcttgcac gagcgcgaat aataccgcgg cgtttttcgg
     1441 gtggaggcga atgcagccgt gcgaggcggg tcgtccgagg cgagagactt cgtagctgcc
     1501 atgaatcgcg tatcccccat tgaaaaagat cgaataaggc atcggcgacc aatcgtattt
     1561 gcgcgagaac catttgcgcg ccagccattg cggtcggtag ctgccgttgg gcgtgttgta
     1621 accccagcgt cccgttgaga cgggccagcg atagcggctg gagccatcga cctcaacggt
     1681 cagtcgctgt gccgatttgt ccactgtcac gacaataccg gctcccgcgg gctcgctggc
     1741 aagcagcaga atcaggccaa agagtgcaga aacggcacgc aatacagaca ctctccgtga
     1801 ccagctacgc ggcatggatg gcacaagttc attaatttag ataaaaatca tttagctgaa
     1861 tggaacaaca gcgtccattc catcgcgata tttaacctga cagtcggatg cgaagccggt
     1921 aaatcggaaa acatcatgtt cgctcgaatc gtgatctcat ctgtcctgtc cctagcggcc
     1981 gctgtcggca cgcttgcggc ccagcgcaac gcgattgctc aaacggcggc agtcgcggag
     2041 cctgcgccgc tgccgttacc accgccgaag ccggcgatga ccgaacagga aaaagaaaag
     2101 agcctgaccg ccaagcaact gttcggcgcg gtgcagttgc cttcgatcgg caaaaccgtg
     2161 gcaatcggcc actaccaccg cggatgtctt gccgccggcg tcgaatttcc gatcaatggt
     2221 ccgaactggc aggtgatgcg cgtgtcgcgc aaccggaatt ggggccaccc cagtttgatc
     2281 cgctttctgg agaaattcgc gccggctgcc gccaaggcga ccggctggaa cggtatcctg
     2341 gtcggcgacc tggcgcagcc tcgcggcgga ccgtcgccga gcgaccacgc cagccaccag
     2401 accggactcg acgtcgacat ctggttcctg ccgatgccgg accgcgtgtt gaccaaggaa
     2461 gagcgtgaca ccatctcggc catcaatctc gtgtccgacg actggaagag cctcaacccg
     2521 gagacgtgga cgccgcaaca cgtcgccttc atcaaggccg ccgccca
//
LOCUS       DATDHO010000930         3898 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_146080, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000930 DATDHO010000000
VERSION     DATDHO010000930.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3898)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3898)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3898
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146080"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1640)
                     /locus_tag="VIY07_18330"
     CDS             complement(<1..1640)
                     /locus_tag="VIY07_18330"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEY6383750.1"
                     /translation="MKSARFDRLLASTALVLVLALSGHEASAQQTESQTRASVPVPDT
                     SLPPPLTAKDVQAPAKQAAKEEPKQDAAAPVSEPGKSTAAAPTPESLVGEKLRELITG
                     RQFDRLIGRKADRAGIEAFYSGRNYAPLWVANNIANERAKAAIAYLGQAGAVGLDPVD
                     YPTPDFKSAASPDALAEAELKLTASALTFARHAQIGRVHFTRVGPDIQFDLAAPEPAD
                     ILAKLADGNDAAKVLDGFNPPQAGFKALKAKLAEVRKAPVAPETKVAPKPEQPRVHVP
                     DGKILRPGMKDVRVIALRKRLDIPGDKDNSLYDDAVRDAVKTFQTESDINVDGDLGPN
                     TVRALNGERKEERRAAADPVETIIVNMERWRWLPRDLGNPHVIVNVPDYTLTLYSNDK
                     VYWHTRIVVGKPNLATPMVSADMKFITVNPTWNVPPSIIEKEYLPALEADPQALDRIG
                     LKLTQNPDGTIHISQPPGAGNALGRIRFNFPNKFLVYQHDTPDKHLFSREKRAYSHGC
                     MRVQNPLTYGEKLLSLVLPKERYTEARLQSMFGENEIN"
     gene            2008..2106
                     /gene="pqqA"
                     /locus_tag="VIY07_18335"
     CDS             2008..2106
                     /gene="pqqA"
                     /locus_tag="VIY07_18335"
                     /inference="COORDINATES: protein motif:HMM:NF019654.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone precursor peptide PqqA"
                     /protein_id="HEY6383751.1"
                     /translation="MRLKGNAMAWTTPILVEICIGLEINGYLPAEL"
     gene            2138..3037
                     /gene="pqqB"
                     /locus_tag="VIY07_18340"
     CDS             2138..3037
                     /gene="pqqB"
                     /locus_tag="VIY07_18340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HEY6383752.1"
                     /translation="MGRLTAIVLGSAAGGAFPQWNCRCPVCALAWAGDPRVKPRTQTG
                     LAVSAGDGHWTLINASPDLPAQIRATSALHPGDGLRGSPIQAVVLTGAEIDQIAGLLS
                     LRESTPFVLYATPASHAAVAANAMFGAMSSMARRAVNPGERFTLAGGIEATLFMVPGK
                     LPLYLEGEAPELDTESPSNVGIELQREGAKMVFVPGTATVTEQMRERFAGADVVLFDG
                     TLFTDDEMIRTGTGQKTGRRMGHIQIDGENGSLRTLTGLPARRIFIHINNTNPILVDG
                     SAERRKVESAGWQIAEDGMEIVL"
     gene            2998..3898
                     /gene="pqqC"
                     /locus_tag="VIY07_18345"
                     /pseudo
     CDS             2998..3898
                     /gene="pqqC"
                     /locus_tag="VIY07_18345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903962.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
BASE COUNT          725 a         1154 c         1235 g          784 t
ORIGIN      
        1 atattgatct cgttctctcc aaacatcgat tgaaggcgcg cttccgtgta gcgctccttc
       61 ggcaacacca gcgacaagag cttctcgccg tatgtcagcg ggttctgcac ccgcatgcag
      121 ccatggctgt aggcccgctt ctcgcgcgaa aagaggtgct tgtccggcgt gtcgtgctga
      181 tacaccagga acttgttcgg gaagttgaag cggatgcggc cgagcgcgtt tccggccccg
      241 ggcggctgcg aaatatggat cgtgccatcc ggattctgcg tcagcttgag accaatgcgg
      301 tcgagggcct gcgggtctgc ctccaaggcc ggcaggtatt ctttctcgat gatcgacggc
      361 ggcacgttcc aggtcgggtt gaccgtgatg aatttcatgt ccgcgctgac cattggtgta
      421 gccaggttcg gcttacccac cacaatccgc gtgtgccagt aaactttgtc gttgctgtaa
      481 agcgtcaacg tatagtccgg cacgttgacg atgacgtgcg gattgccgag atcgcgcggc
      541 agccagcgcc agcgttccat attgacgata atcgtttcga ccgggtcggc agccgcgcga
      601 cgctcttcct tgcgctcacc gttgagcgcg cgcacggtgt ttggtccgag gtcgccgtcg
      661 acgttgatgt cgctttcggt ctggaacgtt ttgaccgcgt cgcgcactgc gtcatcgtag
      721 agcgaattgt ccttgtcgcc cggaatgtcg aggcgcttgc gcaacgcgat cacgcgtaca
      781 tccttcatgc cgggccgcaa aatcttgcca tcgggcacat ggactcgcgg ttgctcgggc
      841 ttcggcgcga ccttggtctc gggagcaact ggagccttgc gaacttcggc gagcttggcc
      901 ttcagcgcct tgaaccccgc ctgtggcgga ttgaaaccgt cgagaacctt ggccgcgtca
      961 ttgccgtcag caagtttggc caaaatgtcc gccggttcgg gcgcggcgag atcaaattgg
     1021 atgtccggac cgacgcgggt gaaatggacg cgcccgattt gcgcatggcg cgcgaaggtg
     1081 agtgccgacg cagtgagctt gagctcggcc tcggccagcg cgtccgggct agccgccgac
     1141 ttgaagtcag gcgttggata gtcgaccggg tcgaggccaa cggcgccagc ttggcccagg
     1201 tacgcgatag cggctttcgc ccgttcgttg gcgatattgt tggccaccca gagcggcgca
     1261 tagttgcggc cactgtaaaa ggcttcgatc cccgcgcgat cggcctttcg gccgatgagg
     1321 cggtcgaact gccgcccggt aatcaattcg cgaagcttct cgccgacaag gctttcgggc
     1381 gttggcgcgg cggccgtgga cttgcccggc tcgctaacgg gggctgcggc gtcctgcttt
     1441 ggctcttcct ttgcagcctg cttcgccgga gcctgcacgt ccttggctgt caggggcgga
     1501 ggtagcgacg tgtccggcac aggcactgac gcccgggtct ggctttcggt ctgctgcgcg
     1561 gaagcctcgt ggccggacaa agccagcacc agaacaagcg ccgtcgaggc cagcaggcga
     1621 tcaaatcgtg cacttttcac cactttatct cccaatgatg gagggccgag gaggccgccg
     1681 aatgtcattc catactactg atagtgcaca cgcagttacg tttttcccaa cggctatgtc
     1741 agaacaggag ggaactgtgg ctattttgca agattgcacg attcacacga ttcactgcag
     1801 gttttagcaa acaagcaggc agagccgaag ggaacaaacg gacgggaggg cgcttcgtgg
     1861 gcacttttca ggacttatac ccataacagt tgtgtgcggc gccgttatgg cggccggggc
     1921 atgacaaaga cgtgaatact cttgtgaacg gccaggctct tgcggcgttt tacccctgcg
     1981 ttaaattggc ggggaacgcc ggtcagaatg cggctgaaag gaaacgccat ggcttggacc
     2041 accccgattc tcgtcgagat ctgcatcgga ctggaaatca acggctatct gccggccgaa
     2101 ctctgatttt ctgatcccgt cccgacaacc ccgctagatg gggcgcctca ccgccattgt
     2161 gcttggttcg gcggccggag gcgcttttcc gcaatggaac tgccggtgtc cggtctgcgc
     2221 tctcgcgtgg gctggcgacc cacgcgtcaa gccgcggacg caaacaggcc ttgcggtctc
     2281 ggcgggcgac ggccattgga ccctgataaa cgcttcaccg gatttaccgg cacagatccg
     2341 tgcgacatcg gccctgcacc ccggagacgg cttgcgaggt agtcccattc aagccgttgt
     2401 gctgacgggg gcagagatcg accagatcgc cgggctattg tccctgcgcg agagcactcc
     2461 atttgtgctg tatgccacgc cggccagcca cgcggcggta gccgccaacg ccatgtttgg
     2521 cgcgatgagt tcgatggcgc gccgtgcggt caatccgggc gagcgcttta cgcttgcggg
     2581 cgggatcgaa gcgacgttgt tcatggtgcc gggcaagctt ccgctgtacc tggagggcga
     2641 agcgccggag ctcgataccg agagcccgtc caacgtcggc atcgaattgc agcgcgaggg
     2701 agcaaaaatg gtattcgtgc ccggaacggc gacggtcacc gagcaaatgc gcgaacgctt
     2761 tgccggcgcg gacgtcgtac tgtttgatgg cacgctcttt accgatgacg aaatgatccg
     2821 caccggcacc ggccaaaaaa ccggccgtcg catgggccac attcaaattg acggagagaa
     2881 tggctcactg cgcacgctga cggggttgcc ggcacgacgt atctttattc acatcaacaa
     2941 caccaatccg atcctcgtcg atggctctgc tgagcgccgc aaggtcgaga gcgccggctg
     3001 gcagatcgcc gaggacggca tggagatcgt gctgtgaagc tactgtctcc ggacgagctt
     3061 gaagccgcgc tgcgtgagat tggcgaaagg cgctatcacc gcctgcaccc gtttcatgcg
     3121 ctgctgcacg gcggaaaatg taccaagggt caggtgcagg cgtgggcgct taaccgctac
     3181 tactatcaag ccatgatccc gatcaaggat gcgagcctga tcgcccgttg cgaggattca
     3241 tcgatccgcc gcgaatggcg cgcgcgtctg gtcgaccatg acggcgagca cgagggcgat
     3301 ggcgggatcg cgcggtggct caggctgacc gacggccttg ggcttgagcg cggctacgtc
     3361 acgtcgttgc gcgggatact gccgggcaca cgttttgcgg tcgatgccta tgtccatttc
     3421 gtgcgcgaga agaccttgct ggaagccatc gcatcatcgc tgacggagat gttttcgccc
     3481 gtcatcatca gcgaacgcat ggccggaatg ctggcgaact atgacttcat tactcgcgag
     3541 accctgagct atttcgacaa gcggccgccg caagcgcagc gcgatgccga tttcgccctg
     3601 aacttcgtca aacgaaacgc cagaacgccg gagcaacaac tggcggtcct cgccgctctc
     3661 gaattcaaat gcagtgtgct gtgggccatg cttgatgcgc tttatcacgc ctatgtggcg
     3721 cccaagcacg ttccggaagg cgcgtttatg ccggaggaca aatgatgacg gagccggtga
     3781 tccgggtttc ggatagcgac cgccccaggt tgccgcgcgg ggtgcgacta actcacaacg
     3841 aggcgcaggg cggctggatc ctactggcac cggaacgcgt cttcaaagcg gatgcaat
//
LOCUS       DATDHO010000931         2178 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_196453, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000931 DATDHO010000000
VERSION     DATDHO010000931.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196453"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..732)
                     /locus_tag="VIY07_18350"
     CDS             complement(<1..732)
                     /locus_tag="VIY07_18350"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6383753.1"
                     /translation="MTLTRRTLVLAGLAAPLAAPGVARAQSWPSGPVRIVVAYPPGGS
                     TDAMMRLVQPGLQQRLGATVVIENRSGASGSVGTAAVVKSPPDGNTWLAVFDNHAANP
                     FVLPGLPYDTEKDLDPVLLIGTAPYMITTAAAKPYKTLADIISFAKENPGKVSYGSVG
                     SGSVGHLAMALLSQRAGVKLTHVPYRGGGPAMNDAVAGHVELLVGSTALSMPQVEAKT
                     IRPIAQTGKERNQFIAQVPTVAESFP"
     gene            855..1292
                     /locus_tag="VIY07_18355"
     CDS             855..1292
                     /locus_tag="VIY07_18355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383754.1"
                     /translation="MPSGGKRALTLLVVSAAAALAGCATDIEPSSSELKARWDAQNVY
                     PQGYRQDLLAFLRTYLNDPTQIRGAAVSQPQLKYVGPGDRYVACVRYNSRNSDGKYQG
                     SKDGAAVYVAGKLDRFFDTPRDVRELCKEVAFAPFPELERLTR"
     gene            complement(1388..1591)
                     /locus_tag="VIY07_18360"
     CDS             complement(1388..1591)
                     /locus_tag="VIY07_18360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008563500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEY6383755.1"
                     /translation="MPQGTVKWFNPTKGYGFIQPQEGGKDVFVHISAVERAGLSTLNE
                     GQTVQYELVENRGKTSAENLKVK"
BASE COUNT          428 a          632 c          656 g          462 t
ORIGIN      
        1 gggaaagctc tcagccactg tcggcacttg cgcgatgaac tgattgcgtt ctttcccggt
       61 ttgcgcaatc ggacgaattg tctttgcttc cacctgcggc atcgacagtg ccgtgctgcc
      121 aacgagaagt tcgacatggc cggcgaccgc atcgttcatc gccggaccac cgccgcgata
      181 aggcacatgc gtcaacttta cgccggcgcg ctgcgacagc agcgccatcg ccaggtgtcc
      241 aacgctgccg ctgccgaccg agccgtagct gaccttgccc ggattttcct tggcgaagga
      301 gataatatcc gccagcgtct tgtatggctt ggccgccgcc gtggtgatca tgtagggcgc
      361 ggtgccgatc agcagaacgg ggtcaagatc tttttcagtg tcgtatggca agccaggcaa
      421 cacgaatgga ttggcggcgt ggttgtcgaa gaccgccagc caggtattgc catcgggtgg
      481 tgatttgacg accgcggccg tgccgacgct gccggatgcg ccggaccggt tttcgatcac
      541 gaccgtcgcg ccgagtcgct gctgcaaccc cggctgaacc agtcgcatca tggcgtcggt
      601 cgatccgccc ggaggatatg ccacgacaat gcgcaccggc cccgatggcc acgattgggc
      661 gcgcgccacg cccggtgccg ccagtggtgc ggccaggccg gcaagcacaa gtgtgcggcg
      721 tgtgagtgtc atgacatcct cccgaagatt atcttatgcg tgtcagcata catttgttca
      781 gcgcacagtg catggccctc gctggccgat ccgccaccag ctatgattgt ggcccgaaag
      841 cgaggatcga acgaatgcct agtgggggaa agcgagcatt gacgttgctt gtcgtgtctg
      901 ccgcggcagc cctcgctggt tgcgccaccg acatcgagcc gagttcgtcc gaactgaagg
      961 ctcgctggga tgcccagaat gtctacccgc aaggatatcg ccaggatctg ctggcattcc
     1021 ttcgcaccta ccttaacgat cccacgcaaa tccgtggcgc ggcagtctcg caaccgcaac
     1081 tcaagtatgt cgggccgggc gaccgatacg tcgcctgcgt gcgttacaat tctcggaaca
     1141 gcgacggcaa atatcagggc tcgaaagacg gcgccgctgt ctatgtggcg ggcaagctcg
     1201 accggttttt cgatacgccc agggatgtgc gggagctttg caaggaagtg gcgtttgcgc
     1261 catttccgga actcgagcga ctcacgcgat agcatgcagc agtgcaacaa ccgccgggct
     1321 gatcagctcg gcggtgcaat ttcagaccaa gaagccggta gtaagtagtc agctcggacg
     1381 tctcaggtca cttgaccttg aggttctccg cggacgtctt cccacggttc tcgacgagtt
     1441 cgtactgaac ggtttgtcct tcgttcaggg tgctaagtcc ggcgcgttcg accgccgaga
     1501 tgtgtacgaa cacatccttc ccgccttctt ggggctggat gaagccgtag cccttcgtcg
     1561 gattgaacca ctttacggtg ccctgaggca tgctagatct ccgaagtatt accaacgtca
     1621 cagtttgcca cagtcctcaa gctgcgaaca aggtcctcgt ccctcgggaa gccgtgagtt
     1681 tggctatatt tttgtgactg ctggaggcct aaattcggtg ccggacgagg gatttgaacc
     1741 gtgggccaac ggtttacaaa acccgcgcct gcgttgatag cactcggcta tcgtccgcat
     1801 gtcgcgtctt gttgaatgga catccacgcc cgcgcggctg gctgccttga tcgtcgccat
     1861 gtcgacgcga tgctttcgat atccaacatc aaaagtcacg aacggaagag cggcccatta
     1921 cggtttgaag tcgcttggac gaccatttga gatattgaaa tgaggcttgc tgccccgtgc
     1981 cgaaggggat ggaaccggtg gcgggctcca aaacagggtt ccttggtcga tctgtagagg
     2041 tatccagaaa cgcttccggg atattggtga gacttcccgc tttaccgcta cgatttggga
     2101 atacgatgcg gcggggcttc gggcaatcgg cacgccattg ctcgagcggt tacgacgggt
     2161 gtcaaaaaca tggataaa
//
LOCUS       DATDHO010000932         4718 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_295097, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000932 DATDHO010000000
VERSION     DATDHO010000932.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4718)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4718)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4718
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295097"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="VIY07_18365"
     CDS             <1..350
                     /locus_tag="VIY07_18365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383756.1"
                     /translation="IWLTETVTAVGIVALLPLNLEAALVVLPIVGVALNGTSSVLYGS
                     VPDLVEPAWRQRAFSIFYTGTIGAGAVSPAIYGLLGDVVGIPTALMAVAALVLATLPI
                     TLVLRPALIARPS"
     gene            449..637
                     /locus_tag="VIY07_18370"
     CDS             449..637
                     /locus_tag="VIY07_18370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3072 domain-containing protein"
                     /protein_id="HEY6383757.1"
                     /translation="MPKRPNAITLMTADQANLLRQLAFDAYEPEAFSPSLTKAEAEQR
                     IAMLQAKLKLMGEPPHIQ"
     gene            729..1106
                     /locus_tag="VIY07_18375"
     CDS             729..1106
                     /locus_tag="VIY07_18375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008878330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HEY6383758.1"
                     /translation="MTHFRHAAIVAALLAGAGAAGAQTTVITREPVEPRTVVTTGPVQ
                     LTPIQRQTIYRTIVRERVVPAPPTVEYRIGTRVPPSVQLYSVPQEIAVEVPAIGAYKY
                     MVVNNRVVLIDPATSEVVAEVID"
     gene            1271..1540
                     /locus_tag="VIY07_18380"
     CDS             1271..1540
                     /locus_tag="VIY07_18380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383759.1"
                     /translation="MSMINYRAPSELFPSRSRKSRRPIGYKRFPTAAEAIRFAIEELP
                     PELLLGAYLEVEEKRFDGNGIRQLYDSADYPLPRKAAKTKVATAN"
     gene            1674..2468
                     /locus_tag="VIY07_18385"
     CDS             1674..2468
                     /locus_tag="VIY07_18385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383760.1"
                     /translation="MKTNQIKLAAAVAAVIAVPILSCLAGAEESATVPTDPGFKADTG
                     QINPGKTEPAPFESSKVTNIPTPDEARRALLTPISKQPSAGNVPNAPRPEGQTVGGPS
                     ANQESKNAVGGPQGLTTSGTVPIPEAGKAGAQAASPGSSAGTEPAPSGPIGSFGETIP
                     AKFSQRNDVLDRVPIMAWPLPLTDQQRKQVYDAVMADQSQPVAGADALKPASELSTDQ
                     ALNGMRPLPESVRGIEGLGKLQYVKANNKVLLVDPATRTVVDQITS"
     gene            complement(2532..2978)
                     /locus_tag="VIY07_18390"
     CDS             complement(2532..2978)
                     /locus_tag="VIY07_18390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383761.1"
                     /translation="MTAIKPERLGAVPEKPGPEIYAPNRKSSERSDEIDQDAAAAFEG
                     EIREFVRRDVAFLRRQRPDGDGSSEPVAENLNGLIRRVSGASVDEIDRVILELQGVRE
                     MLRSEGERVGREIAGYASLSHAAMTAMKVIGDSLTSWKNPPNKSDD"
     gene            complement(3147..4010)
                     /locus_tag="VIY07_18395"
     CDS             complement(3147..4010)
                     /locus_tag="VIY07_18395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383762.1"
                     /translation="MRANAHCALWTAGLLLVVPVPASAQDAPQTVDDSSALVPESPLT
                     AEESAMLGNALVFDPTALATPPKKPLRLPGVSDKDFDITRTEMPDGSSTVVVKQPLQT
                     EWSNSVGADRGPTSDHSAFDHPLPTTRDSSPSGAAWASIGVPNVGSVDARVDPFNEQG
                     KVGTTLKQSIPFTGRFAVTLQNTYSVTETLGQPATGPTDMPLMTLPMAAAPGSGQVFG
                     NERSVKFNILRTGTTLGAGLMSVSNDPITHNTFSAEQKLYGPLQVTTAVTDFSQTTSS
                     KSISAGFKVHW"
     gene            complement(4127..4489)
                     /locus_tag="VIY07_18400"
     CDS             complement(4127..4489)
                     /locus_tag="VIY07_18400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383763.1"
                     /translation="MLRRFVLAFLWFAGLVVPTAFALALLAAPAARPEPAIPPGCDRS
                     LADATANVASMKARLRGLGAAAGPDTCTATRLYFLELVKARAVTALCKNGAERDRDLG
                     RFDADVEHTNEAIATRCL"
BASE COUNT          933 a         1395 c         1428 g          962 t
ORIGIN      
        1 cgatatggtt gaccgagacc gtgacggccg tcgggattgt cgcgctcctc ccacttaacc
       61 ttgaagcagc acttgtggtc ttgccgatcg tcggagtggc cctcaacggg acatcgtcgg
      121 tattgtatgg ctctgtgccc gacctcgtgg agccggcctg gcggcagcgc gcgttcagta
      181 tcttctacac cggcacgatc ggcgcaggcg ccgtgtcgcc ggcaatctat ggtttgctcg
      241 gcgatgtggt aggcattccg acagcgctta tggccgtagc ggcccttgtg cttgcgacat
      301 tacccattac gcttgtgttg cgtccggcgc tgatcgcacg accatcataa ctgagcgctc
      361 aagtgctatt gcgtcaaaga atcgagagag ccattctttg tcgcatcggc ggccgggaac
      421 ggatcgcgat ccgtgcgatt gtgctgacat gccaaagcgt ccgaacgcca tcacgttgat
      481 gactgccgat caggcaaatt tgcttcgaca acttgctttc gatgcctatg agcccgaggc
      541 ctttagcccg agtttgacca aagccgaggc agagcagcgg attgcaatgc tgcaggcaaa
      601 attgaagctg atgggcgaac cgccccacat acagtgacgg aattcgtgaa gctgctcgaa
      661 tgcgagcagg aaccctccgc tccacccggc gttggcacgg tttgcacgaa agcggagagg
      721 aggaacttat gacacatttt cgccatgcgg cgatcgtggc tgcgctgctc gcgggtgctg
      781 gcgcggccgg cgcgcagact acggtaatca cccgcgagcc ggtggagccg cggactgtcg
      841 tgaccacagg gccggtacag ctcacgccca ttcagcggca aacgatctac cgcacgattg
      901 ttcgtgagcg tgtggtgcca gcgccgccca ccgtagagta ccgcatcggc acccgcgtgc
      961 cgccaagcgt gcagctctat tcagtgccgc aagaaattgc cgtcgaggtg ccggcaatcg
     1021 gggcctacaa atacatggtg gtaaataacc gggttgtgtt gatcgatcca gccaccagcg
     1081 aagttgttgc cgaagtgatc gattaggctt ccgacttttg tcggatttgg cccggcgcca
     1141 gcgcgccggg ccatgttttt tgcccattca atgtttaccc tgcagaactc gggctggtaa
     1201 tgcggcgacg gctgggtgct ggattttcgg cctcgcaagg gccatattag gcgctgagga
     1261 gtctttgatt atgtcgatga tcaactaccg cgccccgtcc gaactttttc ctagccgcag
     1321 ccgcaagtcg cgccgtccga tcggttacaa gcgatttccg accgccgcgg aggcgatccg
     1381 cttcgccatt gaggaattgc cgccggaatt gcttttgggc gcctatctgg aagtggaaga
     1441 gaagcgtttc gacggcaacg gtatccggca gctctacgac agcgccgact accctttgcc
     1501 gcgcaaggcg gccaagacaa aggtcgctac ggccaattga actaaacacc acttttgatt
     1561 ttccgagtcg cggtccctgg ccgcgatacg gattcgtgtg gttgtcggtc cgccgcatga
     1621 aaccgctgcc gcctccaatt cgttgtcccg tatagcccga ttggaggctc cccatgaaaa
     1681 cgaatcaaat caagttagca gcagcggtgg ctgccgttat cgccgtaccg attctgagtt
     1741 gcctagcagg cgccgaggag agcgcgactg tcccgaccga tccgggtttc aaagcggata
     1801 ccggccagat caatccaggc aagacagagc cagcgccgtt cgagtcgagc aaggtgacca
     1861 atatccccac acccgacgaa gcgcgccggg cattgctgac gccgatttcg aagcaaccgt
     1921 cggcgggcaa tgtgccgaat gcaccacgtc cggaaggtca gaccgtgggc ggtccaagcg
     1981 cgaaccagga atcaaagaat gctgttggcg gcccccaagg tctcacgacc tcaggcactg
     2041 tgcccattcc tgaagccgga aaagcgggcg cccaagctgc ttcgccaggc tcgagtgcgg
     2101 gcaccgaacc ggcaccatcc ggaccgatcg gatcgttcgg tgagaccatc cctgcgaaat
     2161 tctcacaacg caatgacgtg ctcgatcgag taccgatcat ggcttggccc ttgccgttga
     2221 ccgatcagca gcgaaaacag gtttacgatg cggtgatggc agatcagtcg cagcccgtgg
     2281 ccggcgccga cgcgcttaag ccggcgagcg aactatccac cgaccaggca ctgaacggca
     2341 tgcgtccgct gccggaaagc gtccgcggca tcgaagggtt ggggaaactg caatatgtga
     2401 aagccaacaa taaagtgctt ctggtcgacc ctgccacccg gacggtggtc gatcaaatta
     2461 catcctaaaa gcaggaaagc catcgccggc tggcggcgat ggctttcttg atgcggtatt
     2521 tctatcggcc gtcagtcgtc ggatttgttc ggcggatttt tccagctcgt gagactgtcg
     2581 ccgatgactt tcatcgcggt catcgccgcg tggctcagac tcgcataacc ggcgatctcg
     2641 cgtcccacgc gctcgccttc gctgcgcaac atttccctca ctccttggag ttcgagaatg
     2701 acccgatcaa tctcgtccac cgaggcgccg gaaactcgac ggatcaaccc attcagattc
     2761 tccgccacgg gctcggagga cccatctccg tccggacgct ggcgacgcaa aaacgcaacg
     2821 tcgcggcgga cgaattcgcg gatctcaccc tcgaaagccg ctgccgcatc ctgatcgatc
     2881 tcgtcgctcc gttcggatga tttccggttc ggtgcatata tttccggacc gggtttttcc
     2941 ggtactgcac cgagccgttc gggtttgatg gccgtcatga tcaactccta caaggcgcaa
     3001 ctatttttgc gcggtggtcc ccagttgcgg acggattgcg gcacgcgact taggcggtcg
     3061 tggggcggag cacggaacct ttccggcagg agagggcggc catgaagtta ttcacgtctt
     3121 ttcggcggct tccttgcccg ttttccctac cagtgcacct taaacccggc actgatgctc
     3181 ttgctgctgg tagtttggct gaaatcggtc accgcggtgg taacctggag ggggccatag
     3241 agcttctgct cggcgctgaa cgtattatgc gtgatcgggt cgttgctgac gctcatcagt
     3301 cccgcgccga gcgttgtccc ggtccgaagg atgttgaact tgaccgacct ttcgttgccg
     3361 aacacctgac cggatccggg tgcggcggcc ataggcaatg tcatcaatgg catgtcagtc
     3421 ggtcccgtgg cgggctggcc gagcgtttcg gtgaccgaat aggtattttg caaggtgacc
     3481 gcgaaacggc cggtaaaagg aatcgattgc ttgagcgtgg tgccgacctt gccttgctcg
     3541 ttgaaggggt cgactcgcgc atcaacgctc ccgacattcg ggacgccgat cgatgcccag
     3601 gcggctcccg aaggagaact gtcgcgtgtc gtcgggagcg ggtgatcgaa cgcgctgtgg
     3661 tcgcttgttg gaccacgatc ggctccgacc gaattgctcc actccgtttg cagcggttgc
     3721 ttcacaacga ctgtcgatga accgtcaggc atttccgtgc gggtgatgtc gaagtctttg
     3781 tcggacacgc ccggcagacg cagcggcttt ttcggcggag tggcaagggc cgttggatca
     3841 aacacgaggg cgttgcccaa catcgcgctt tcttcggccg tcagtggaga ctccggaacg
     3901 agggcactac tgtcgtcgac ggtttgcggc gcgtcttgtg cggaggctgg tacgggaacg
     3961 accaacagca gaccagccgt ccacaacgca cagtgagcat ttgcccgcat gtcaaaaatc
     4021 ttccccgcat gttttccgga ggtttctggg ccaaaccggt tcaatagccg ttggggctat
     4081 gtcatggaac tttggcgaag ctgtggaagg gcttagtagg tttttctcac aagcaccggg
     4141 ttgcaattgc ctcattggta tgctcgacat cggcatcgaa gcggccgaga tcgcggtcgc
     4201 gttccgcgcc gttcttgcac agcgccgtca cagcgcgtgc cttcaccagc tcaagaaagt
     4261 agaggcgcgt ggcggtgcat gtgtctggtc cagctgcggc cccgagacct cttaaccgag
     4321 ccttcatgct cgcaacgttc gccgttgcgt cagctagact gcgatcgcag ccaggcggaa
     4381 tcgccggttc cggtcgggca gccggggcag ccagaagcgc caacgcaaac gcggtcggaa
     4441 caacaagtcc agcgaaccaa aggaaagcga gcacaaaacg cctcagcatg gaggacctcc
     4501 gcgactaccc ccttggtcgt gcggagtgaa gaaaaggttc atcccgcgag gatgaaaccg
     4561 gcaccgagct acgtcgaatt gctgacctgc ccggaaatcg ccaagcaggc caaggagctg
     4621 ccgaaagagc ccgcgctggg gacgacagga cagcggtgat tttcagggct tcttgccggg
     4681 cggaggatta tatgggctgc tggaagaacc ctgcatct
//
LOCUS       DATDHO010000933         4639 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_487728, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000933 DATDHO010000000
VERSION     DATDHO010000933.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4639)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4639)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4639
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487728"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..458)
                     /locus_tag="VIY07_18405"
     CDS             complement(<1..458)
                     /locus_tag="VIY07_18405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HEY6383764.1"
                     /translation="MNPNLVALLYLVSGVLFILALRGLSSPDSSRRGNLFGMVGMAIA
                     VLTTLAAHPPASPTAWGLVVGGIVVGGSIGALIARRVPMTSMPELVAAFHSLVGMAAV
                     LVAAGAFYAPAAFGIGTHGHIHGSSLIEMSLGVAIGAVTFTGSVIAFLKLS"
     gene            complement(466..789)
                     /locus_tag="VIY07_18410"
     CDS             complement(466..789)
                     /locus_tag="VIY07_18410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-translocating transhydrogenase family
                     protein"
                     /protein_id="HEY6383765.1"
                     /translation="MEHVATAVDPFVFQLSIFVLAVFVGYYVVWSVTPALHTPLMSVT
                     NAISSVIVVGALLAVGVPLAANDDGPLWARALGLVALVFASVNIFGGFLVTQRMLGMY
                     QKKKK"
     gene            complement(800..1930)
                     /locus_tag="VIY07_18415"
     CDS             complement(800..1930)
                     /locus_tag="VIY07_18415"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEY6383766.1"
                     /translation="MRIAVPRETDAGEPRVAATPETIKKFKSFGADVAVARGAGIASG
                     IPDAEFEAAGAQVGDAVTKDADIVLKVRRPAPSELSAYKKDALVIAIMDPYGNEAALK
                     QMADAGISALAMELMPRITRAQSMDVLSSQANLAGYRAVIDAAEEYGRALPMMMTAAG
                     TVPAAKVFVMGVGVAGLQAIATARRLGAIVTATDVRPATKEQVESLGAKFLAVEDEEF
                     KNAQTAGGYAKEMSKEYQAKQAALVAEHVKKQDIVITTALIPGRPAPRLISKEMIASM
                     RPGSVIVDLAVERGGNVEGVQADRVVQAGGVKIVGHLNVPGRLAASASSLYAKNLLTF
                     VETLIDKKEKKLAVNWDDELVKATLLTRGGAVVNPDFQPKAA"
     gene            complement(1962..2261)
                     /locus_tag="VIY07_18420"
     CDS             complement(1962..2261)
                     /locus_tag="VIY07_18420"
                     /inference="COORDINATES: protein motif:HMM:NF019452.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /protein_id="HEY6383767.1"
                     /translation="MAEHGNVEYATATGNDYAAHEQGYESFVHFTLVGILYVVTVLFG
                     LATGGVMGHWLLAAAIFVIGLLGAIPGLLSRATTPSYVSFVICFLIFAFTGLSPR"
     gene            complement(2395..3753)
                     /locus_tag="VIY07_18425"
     CDS             complement(2395..3753)
                     /locus_tag="VIY07_18425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/UbiB family protein"
                     /protein_id="HEY6383768.1"
                     /translation="MPPIDREKNRFSARARRYARVGTQLSGTAARFAGARFFGVPLDR
                     AANALELAAALGGLKGPIMKVAQLLATIPDALPPEYANELIKLQSQAPPMGWAFVKRR
                     MSAELGSDWQKKFSEFDHHPAAAASLGQVHRARALDGSEVACKLQYPDMQSAVEADLN
                     QLQLLFAIRKRFDPAIDTSEIAVEIGARLREELDYGREAKHVELYRYMLNDKHAIRVP
                     KVWPDLSTGRLLTLDWLSGRKLLEHKTDTLAARNRLATAMFTAWWFPFSRFGVIHGDP
                     HLGNYSVFDDAKGKPAGINLLDYGCIRIFPPTFVSGVVDLYRGLLRGDDELVVHAYKT
                     WGFKRINRELIDALNIWARFIYGPLLDDRVRTIADGVKPSEYGRKEAFRVHQALKAKG
                     PVTVPREFVFMDRAAIGLGAVFLHLAAELNFYRLFNEAIESFAVEDVAARQGAALKKV
                     GL"
     gene            complement(3813..>4639)
                     /locus_tag="VIY07_18430"
     CDS             complement(3813..>4639)
                     /locus_tag="VIY07_18430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEY6383769.1"
                     /translation="TILTAYGAFSPKMAEIADRFFEKNWIDAPVRPGKQPGAFAHPAV
                     PSVHPYILLNYMGKPRDVMTLAHELGHGVHQVLAAPNGPLMAPTPLTLAETASVFGEM
                     LTFQKLLAETTDKKQRKAMLAAKVEDMINTVVRQIAFYIFERKVHTERRNGELTADKL
                     CDLWMSVQGESLGPAIELKPGYETFWAYIPHFVHSPFYVYAYAFGDCLVNSLYAVYEK
                     SESGFAERYLAMLSAGGTKHHSELLAPFGLDARDPKFWDGGLRVSAKLIDQLEALE"
BASE COUNT          919 a         1463 c         1419 g          838 t
ORIGIN      
        1 gaaagtttaa ggaacgcgat cactgagcct gtaaacgtga ccgcgccgat cgcgactccc
       61 agcgacattt cgatcaggct cgaaccgtgg atatgaccgt gagtgccgat gccgaaagcc
      121 gccggcgcat aaaatgctcc agccgccacc agcaccgccg ccatgccgac cagggaatgg
      181 aaggccgcga ccaactccgg catcgatgtc atcggcacgc gccgcgcaat tagcgcgccg
      241 atgctgcccc cgacaacgat cccgccgacg accaatcccc acgcggtcgg gctcgccggc
      301 gggtgcgccg cgagcgttgt gagcacggcg atggccatgc cgaccatgcc gaacagattg
      361 ccgcgccggc tcgagtccgg gctcgacaac ccgcgcaggg ccagaatgaa cagaacgccg
      421 gaaaccagat agagcagcgc gacgagattg gggttcatgc cgcgctcatt tctttttctt
      481 ctggtacatg ccgagcatgc gctgggtgac gaggaaaccg ccaaagatgt tgaccgaggc
      541 gaacacaagc gcgacgaggc caagcgcgcg cgcccacaag ggaccatcgt cattggcagc
      601 cagcgggacg ccgacggcga gcaatgcacc gaccacgatc accgacgaga tcgcattggt
      661 gaccgacata agcggcgtat ggagcgcggg cgtcaccgac cagaccacgt agtaaccgac
      721 aaagacggcg agcacgaaga tcgacagctg gaacacgaag ggatcgaccg cagttgcgac
      781 gtgttccatt tctccctcct caggctgctt ttggctgaaa atccgggttc acgacggcgc
      841 caccgcgggt gagcagtgtc gccttcacca gttcatcgtc ccagttgacc gcaagcttct
      901 tttctttctt gtcgatcagc gtctcgacaa aggtcagcag gtttttggca taaagagacg
      961 acgcggacgc cgcgagtcga ccgggcacat tgaggtggcc cacaattttc acgccgccgg
     1021 cctgcacgac gcggtcggcc tgcacgccct cgacgtttcc tccgcgttcg acggcgagat
     1081 cgacgatgac cgagccgggc cgcatcgagg cgatcatctc cttggagatc agacgcggcg
     1141 cggggcggcc ggggatcagg gcggtggtga tgacgatatc ctgcttcttg acgtgctcgg
     1201 cgaccagcgc cgcctgcttg gcctggtact ccttcgacat ttccttggca tagccgcccg
     1261 ccgtctgagc gttcttgaat tcctcgtcct cgaccgcgag aaatttcgcg ccgaggcttt
     1321 cgacctgctc cttcgtcgcg gggcgcacgt ctgtcgccgt gacgattgcg cccaggcggc
     1381 gcgcagttgc aatggcctgc aagccggcga cgccgacgcc catgacgaac accttcgcgg
     1441 ccggcactgt cccggccgcg gtcatcatca tcggcagggc ccgcccatat tcttccgccg
     1501 cgtcaatcac ggcccggtaa cccgcgagat tggcctggct ggaaaggacg tccatcgact
     1561 gcgcgcgcgt gatccggggc atcaactcca tggccaatgc agaaatcccg gcatccgcca
     1621 tctgcttcag cgcggcctcg ttgccgtaag ggtccatgat cgcaatgacc agcgcgtcct
     1681 tcttgtacgc gcttagctcg ctcggcgcgg gacgccggac cttcaaaacg atatcggcgt
     1741 ccttggtgac cgcatcgccg acttgcgcgc ccgctgcctc gaactccgcg tccgggatgc
     1801 cggacgcaat gccggcgccg cgcgcaaccg cgacgtcagc accaaacgat ttgaacttct
     1861 tgatggtttc cggagtcgcc gcgacccggg gctctccggc gtcggtttca cgcggtacgg
     1921 caattcgcat ttcgcgcctc cccgcccggt cgtgaatttc gtcagcgtgg cgacagcccg
     1981 gtgaaggcga agatcagaaa acaaatcaca aaggacacat aactgggcgt cgttgccctg
     2041 ctgagcaggc ctggaatggc gccgagcagc ccgatgacga agatggccgc ggccaggagc
     2101 cagtgtccca tcacgccgcc ggtcgcaagc ccaaacagga cggtcaccac atagaggatg
     2161 ccgaccagcg tgaaatggac aaagctctcg tagccctgct catgagctgc gtagtcgtta
     2221 ccggtggcgg tggcgtattc aacgttgccg tgttcggcca tggggaaaac tctccgggtc
     2281 gctcagaaag agggatattg aggggttagc gcaattgcga ccgcagggca acgccggacc
     2341 tcatccgttc attcccgcgc gatgggtccg cgctttcgcg gggacgaacg gaaattagag
     2401 gccgaccttc ttcagcgcag ccccctgccg ggcggctacg tcttcgaccg caaaggattc
     2461 gatcgcctcg ttgaacaagc ggtagaaatt gagttccgcc gcgaggtgga gaaagaccgc
     2521 gccaagccca atggcagccc ggtccatgaa gacgaattcg cgcggcaccg tcaccgggcc
     2581 cttggcctta agcgcctgat gcacgcgaaa ggcttccttg cggccgtact cggacggttt
     2641 cacgccgtcg gcgatggtgc gcacccgatc atccagcagc gggccatata tgaaacgggc
     2701 ccagatattg agcgcatcga tcagctcacg attaatccgc ttgaatcccc aggtcttgta
     2761 agcgtgcacc acgagctcgt catcgccccg cagcagtccg cgatagaggt cgaccacgcc
     2821 gctgacgaaa gtcggtggaa aaatgcgtat gcagccgtag tccagaagat tgatgcccgc
     2881 aggcttccct ttcgcgtcgt cgaagacgga gtaattgccg agatgcgggt cgccatgaat
     2941 gacgccgaag cggctgaagg gaaaccacca cgcggtgaac atggccgtgg cgagacggtt
     3001 gcgcgcagcg agggtgtcgg tcttgtgctc gagcaacttg cgcccggaaa gccaatccag
     3061 cgtcagcaga cggccggttg acagatcggg ccacaccttc ggcacccgga tcgcatgttt
     3121 gtcgttcagc atgtagcgat acaattcgac gtgtttcgcc tctcgaccgt agtcgagctc
     3181 ctcgcgcaga cgtgcgccga tctcgactgc gatctcgctg gtgtcgattg ccggatcgaa
     3241 gcgcttccgg atggcgaata gcaattgcaa ttgattcaga tcggcttcga cggccgactg
     3301 catgtccgga tattgcagct tgcatgcaac ctcgctgcca tccagcgcgc gtgcgcggtg
     3361 cacctggccc agcgaagcgg cagcagccgg atggtgatcg aattcggaaa atttcttctg
     3421 ccagtcggat ccgagctcag cgctcatgcg gcgcttgacg aaggcccatc ccatgggcgg
     3481 cgcctggctt tgcagcttga tcagctcatt ggcgtattcc ggcggcaacg cgtcgggaat
     3541 ggtggcgagc agctgcgcca ccttcatgat cggacctttc aagccgccaa gcgcggcggc
     3601 gagctcgagt gcattcgcag cgcggtcgag cggcacgcca aagaaccgcg cgccggcaaa
     3661 gcgcgcggcc gtgccgctta gctgcgtgcc gaccctggca tagcgcctgg cgcgggcgga
     3721 gaagcgattt ttttccctgt cgatgggagg cataggcggg ctcacccaca ccatctaatc
     3781 agtttcggtt gcaaaaataa ggtcgggcct cgctattcca gtgcttccag ctgatcgatc
     3841 agcttcgcac tcaccctgag accgccgtcc cagaatttgg ggtcgcgcgc gtcgaggccg
     3901 aacggcgcca gcaattcgga atgatgcttg gttcccccgg cagacaacat cgcaagatag
     3961 cgctccgcaa aaccgctctc ggatttttca tagaccgcat agagcgagtt cacgaggcaa
     4021 tcgccgaacg cgtaggcgta cacatagaag ggcgaatgca cgaaatgcgg gatataggcc
     4081 cagaaggtct catagccggg cttcagttcg atcgcagggc cgaggctttc gccctgcacc
     4141 gacatccata aatcgcaaag cttgtcggcc gtgagttcgc cattgcggcg ctcggtgtgc
     4201 accttgcgct cgaaaatgta aaacgcgatc tgccgcacca ccgtgttgat catgtcctcg
     4261 accttggccg cgagcatcgc cttgcgctgc tttttgtcgg tggtctccgc gagcagtttt
     4321 tggaacgtga gcatctcgcc gaacaccgat gcggtttcgg ccaaggtcag tggcgtcggc
     4381 gccatcaatg gcccattggg cgccgccagg acctgatgca cgccatggcc cagctcgtgc
     4441 gccagcgtca tcacatcgcg cggtttgccc atgtagttga gcagaatgta agggtgcacc
     4501 gacggcacgg cgggatgggc aaaagcgccc ggctgttttc cgggacgaac gggggcatcg
     4561 atccagtttt tctcaaagaa ccggtcggca atttcagcca tcttcggcga gaacgccccg
     4621 tacgcggtga gaatggtcg
//
LOCUS       DATDHO010000934         2983 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_92702, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000934 DATDHO010000000
VERSION     DATDHO010000934.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2983)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92702"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..544
                     /locus_tag="VIY07_18435"
     CDS             <1..544
                     /locus_tag="VIY07_18435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEY6383770.1"
                     /translation="LTRRSHPCQVLADVMTYEEKRGPIRGRTVAWSGDANNVLASWMH
                     AAERFDFRLRVATPAELRPKKWLIDWLKTSGAAIMIGDDPEAAVRDADCVVTDTWVSM
                     GDRDGKHRHNILKRYQVNASLMAKAKPDALFMHCLPAHRGEEVTDEVIDGPQSVVFDE
                     AENRLHAQKGLLAWCMHVDA"
     gene            707..1729
                     /locus_tag="VIY07_18440"
     CDS             707..1729
                     /locus_tag="VIY07_18440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone"
                     /protein_id="HEY6383771.1"
                     /translation="MTEPTMTDPQIVIPSRAPSATAADDVVMPFEVAKLDLRGRIVRL
                     GPAVDEILARHAYPQPVAKLLGEAVVLTVMLGTALKIDGRFILQTQSDGPIRMLVVDF
                     TAPDKVRACARFDKGRVAAAMASGQASGGELLGKGHLAMTIDQGPDMNRYQGLVALDG
                     GTLEDVAHEYFQRSEQIPTRVRLAVAEELRPESGGTTHRWRAGGMLLQFLPKAAERAR
                     VADLDPGDAPDGVEPHSIAEDDAWVEGQALISTVEDLELIDPSVSSEQLVYRLFHEPG
                     VRVFRVNPLRAECSCSRDNVEAMLKSFSQDDRDHMVEDGKISVTCEFCSANYQFAPGE
                     VGANPS"
     gene            complement(1722..2114)
                     /gene="apaG"
                     /locus_tag="VIY07_18445"
     CDS             complement(1722..2114)
                     /gene="apaG"
                     /locus_tag="VIY07_18445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015689150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HEY6383772.1"
                     /translation="MYRAVTRKIEVTVTPRFLSERSSPANSYFFWAYTINITNLGDET
                     VQLKTRHWRITDASGRLQQVKGPGVVGEEPTLKAGQSFEYTSGVPLPTPSGFMAGSYG
                     MISETGEHFDIEIPAFSLDSSYAERTIN"
     gene            2205..>2983
                     /locus_tag="VIY07_18450"
     CDS             2205..>2983
                     /locus_tag="VIY07_18450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OpgC domain-containing protein"
                     /protein_id="HEY6383773.1"
                     /translation="MAPVSTERDLRLDLFRGLALWLIFLDHIPSNAVNWVTIRNYGFS
                     DATEIFVFISGYTAAFVYGRAMRQHGFIVASARVLKRAWQIYVAHVFLLAIYLAEIAY
                     VANSFENPLYTEEMGVLDFLKNPDVTIFQALILKFKPVNMDILPLYILLLAWFPPMLW
                     LLLRAPSIALIASATLYALMWVFEWNIPAYPSGTWIFNPFAWQLLFVFGAWCALGGAQ
                     NLSRFIHSPILVGLAIAYVLFAFAITMTWYFPRLAVHVPKVV"
BASE COUNT          557 a          846 c          922 g          658 t
ORIGIN      
        1 tctgacgcgg cgctcacatc cgtgtcaggt attggccgac gtgatgacat atgaggaaaa
       61 acgagggccg atccgtggac gcacggtggc ctggagtggc gatgccaata atgtcctggc
      121 aagctggatg catgcagccg aacgtttcga cttccggctg cgggtggcga cgccggcgga
      181 gttgcggcct aagaaatggc tgatcgactg gctcaagacg tccggcgcgg caatcatgat
      241 cggagatgat ccggaagctg ccgtccgcga tgcagactgc gtggtcaccg atacctgggt
      301 gtcgatgggc gatcgcgacg gcaaacaccg gcacaatatt ctcaagcgct atcaggttaa
      361 cgcgagcctg atggcgaagg ccaagcccga cgcgctgttc atgcattgtc tgccggcgca
      421 tcgaggcgag gaggtcaccg acgaagtcat cgacgggccg cagtcggttg ttttcgacga
      481 agccgagaac cggttgcacg cccagaaggg tctgcttgcc tggtgcatgc acgtcgacgc
      541 gtgagacgcg atttgggccc cgctgctcgt gaggcgcggc ctcgctccgg gcatgcacat
      601 cttcgcgggt gtgagttcca ctaagacgct gatggccggg aagcgcccgg caatcacaga
      661 aaaacacagg gctcgctttt cgagcattgc agtctacata gagcgcatga ccgaacccac
      721 catgaccgat ccccaaattg tcattccttc ccgtgcaccg tcggcgaccg cggccgacga
      781 tgtcgtgatg ccgtttgaag tggccaagct cgatctgcgc gggcgaatcg tacggcttgg
      841 tcctgcggta gacgagatac ttgcgcgcca cgcctatccg cagccggttg ccaagctcct
      901 tggcgaagcg gtggtgctga cagtgatgct gggaaccgcg ttgaagatcg atgggcgttt
      961 cattctgcaa acgcaaagcg acggtccgat tcgcatgctg gtggttgact ttacggcacc
     1021 cgacaaggtg cgcgcctgcg cacgtttcga taagggtcgc gtggctgccg ccatggcgtc
     1081 aggccaggcg agcgggggtg agctgctggg caagggtcac cttgcgatga cgattgacca
     1141 ggggcctgac atgaaccgtt atcagggcct ggttgcgctt gatggcggca ccctcgaaga
     1201 tgtggcgcac gaatattttc agcgttcaga acagattccg acccgggtac gccttgcagt
     1261 cgccgaggaa ttgcgtccgg aatccggagg cacgacccat cgttggcgtg ccggcggcat
     1321 gctgctgcaa ttcctgccca aggctgccga gcgcgcgcgt gttgccgatc tcgatcccgg
     1381 ggatgcgccc gatggcgttg agccgcacag catcgcggag gacgatgcct gggtggaagg
     1441 ccaggccctg atttcgactg tcgaggatct tgagttgatt gacccctcgg tttccagcga
     1501 gcagctggtt taccgacttt tccacgagcc gggcgtgcgg gtattccgtg tcaatccgtt
     1561 gcgcgcggaa tgctcatgct cgcgcgacaa tgtcgaggca atgctcaaga gcttttcgca
     1621 ggatgatcgc gaccatatgg tcgaggacgg caagatttcc gtcacctgcg aattttgcag
     1681 cgcgaattat cagtttgcgc cgggcgaggt cggagccaat cctagttgat ggtgcgctcg
     1741 gcgtaggacg agtcgaggga gaaagcggga atctcgatgt cgaaatgttc tcctgtctcc
     1801 gagatcatgc cataactgcc ggccatgaag cctgaaggcg tcgggagcgg cacgccgctg
     1861 gtgtattcga acgattgacc tgccttcaaa gtcggttctt cgccgacgac gccggggcct
     1921 ttcacttgct gcaggcggcc gctcgcgtcg gtgatacgcc agtgacgcgt tttgagctga
     1981 acggtttcat cgccgaggtt cgtaatgttg atggtgtacg cccagaagaa ataactgttc
     2041 gcgggcgacg accgctccga aaggaaacgt ggcgtcactg tgacttcaat cttgcgtgtt
     2101 acggcacggt acatctatat gccccacaat ttacttcacc ggggcttgcc attcgcttga
     2161 tggcccggat tatggccgaa agaccgcacg aaagaaaagc gcacatggcc ccggtttcga
     2221 ccgaacgtga tctccggctc gatttgttcc gcggcctcgc cctctggctg atctttctcg
     2281 atcacattcc atccaatgcg gtaaactggg tcacaatccg aaattatggc ttcagcgacg
     2341 cgaccgagat tttcgtcttt atctcgggct acacggctgc cttcgtctat ggccgcgcga
     2401 tgcggcagca cgggttcatt gtcgcgtccg cgcgtgtgct caagcgcgcg tggcaaatct
     2461 atgtggcgca cgtttttctg ctggcgatct atcttgccga aatcgcatac gtcgcgaaca
     2521 gtttcgagaa tcctctctac accgaagaaa tgggcgtcct cgatttcctc aaaaatccgg
     2581 acgtgaccat ctttcaggcg ctgatcctga agttcaagcc ggtcaacatg gacatcctgc
     2641 cgctctacat cctgctgctg gcttggtttc cgccgatgct atggctgctg ttgcgtgcgc
     2701 cgtcgattgc attgatcgcg tcggcgacgc tctacgcgct gatgtgggtg ttcgagtgga
     2761 acattcccgc ctatccaagt ggaacctgga ttttcaatcc attcgcctgg caactgctgt
     2821 tcgtgtttgg agcgtggtgc gccttgggtg gcgcgcagaa cctctcccgc ttcattcatt
     2881 cgccgatcct ggtggggctg gcgattgcct atgtcctgtt cgcgtttgca attacgatga
     2941 cctggtactt cccgcggctt gcggtgcacg tgcccaaagt tgt
//
LOCUS       DATDHO010000935         5658 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_44843, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000935 DATDHO010000000
VERSION     DATDHO010000935.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5658
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44843"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="VIY07_18455"
     CDS             complement(<1..199)
                     /locus_tag="VIY07_18455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEY6383774.1"
                     /translation="MIASDTGMNFSFNRVAAMVRRYWYLLRSSWPRILDLIYWPAVQM
                     LMWGFLQVYISQNSNFFVQAGG"
     gene            complement(196..966)
                     /locus_tag="VIY07_18460"
     CDS             complement(196..966)
                     /locus_tag="VIY07_18460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383775.1"
                     /translation="MFPPMDAQNASAIAVDRLVKRYKGVAAVDGISFRLPPGSVTGLL
                     GGNGAGKTTTIAMIMGLVTPTSGSVTVLGAEMPRQRYRVLHRMNFESPYVDVPMRLTV
                     RQNLSVFAQLYAVADIDERIDRLAADLDLTEFLDRPTGKLSAGQKTRVSLAKALLNKP
                     EVLLLDEPTASLDPDTADWVRSRLERYRAEERATILLASHNMAEVERLCERVIIMHRG
                     RIEDDDKPDRLLSRYGRETLEEVFLDVARGRRQSEAAK"
     gene            1048..2364
                     /locus_tag="VIY07_18465"
     CDS             1048..2364
                     /locus_tag="VIY07_18465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012047395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase"
                     /protein_id="HEY6383776.1"
                     /translation="MASPLTQPHPGRNVRLDTLVRLRWLAIIGQTTAVVVVYYGLDFQ
                     LPIYACLAAIVLAAWLNVALRLRFHMTQRLEPDRAAWLLAFDIAELAVLLYLTGGLQN
                     PFAFMFLGPVLLSATALPPRFTLLLGGFAVACATILVFVHYPLPWDSEDPLQLPPIYM
                     MGVWLCILLAIGFIGAYAWQITEESRQLSDALAATELVLAREQHLSQLDGLAAAAAHE
                     LGTPLSTISVIAKELERAIAPEAPHGDDVRLLREQATRCRDILAKLTELSAGGEPFDR
                     MPLTALIEEVVAPHRNFGVSIEVISPSDRSSEPVGARNPAILYGLGNLLENAVDFARD
                     RVAVDAHWNEDSVAVTISDDGPGFAPEILARIGEPYVTTRRHRQDDTGEEPAGLGLGF
                     FIAKTLLERSGATLSFQNRPGPERGAVIRLRWSRSDFEQSAAFAAA"
     gene            2456..3028
                     /locus_tag="VIY07_18470"
     CDS             2456..3028
                     /locus_tag="VIY07_18470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActR/PrrA/RegA family redox response regulator
                     transcription factor"
                     /protein_id="HEY6383777.1"
                     /translation="MATSDTARPAAKDKLNGERSLLIVEDDFSFLQRLAKALEQRGFS
                     VTTAESVSEGLLQVEKAAPAYAVVDMRLGDGNGLDVISALKRRRPDARGIILTGYGNI
                     ATAVNAVKLGAVDYLAKPVDADDVVAALLALDNAKIEPPENPMSADRVRWEHIQRIYE
                     LCGRNVSETARRLNMHRRTLQRILAKRAPR"
     gene            complement(3094..3579)
                     /locus_tag="VIY07_18475"
     CDS             complement(3094..3579)
                     /locus_tag="VIY07_18475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcB family DNA repair protein"
                     /protein_id="HEY6383778.1"
                     /translation="MALASSPFQMPLDGRQSQTALAVARGTARLLHAHGRCVVSELPL
                     PSGRRADLVALDPSGEIWIIEIKSSIADFRADQKWIDYRAHCDRLFFATTVDVPCEIF
                     PPDTGLIVADAFGAEFKCEAPEHRLSAATRKSMMLLFARAAAIRLQSLADPTGPYWEA
                     E"
     gene            complement(3579..4703)
                     /gene="mtnA"
                     /locus_tag="VIY07_18480"
     CDS             complement(3579..4703)
                     /gene="mtnA"
                     /locus_tag="VIY07_18480"
                     /EC_number="5.3.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046523 -
                     S-methyl-5-thioribose-1-phosphate isomerase activity
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose-1-phosphate isomerase"
                     /protein_id="HEY6383779.1"
                     /translation="MKIDGKQMRTIWVESDSASLGIIDQTLLPHRFATVRLATLEDVA
                     RAIVTMQVRGAPLIGVSAAYGLWLALRADASDEALDDACATLIATRPTAINLKWALDE
                     IRGAVRNRPRAERAEAALRRASEIADEDVAINQAIGRYGLPIIEEIVATKKGAPVNVL
                     THCNAGWLATVDWGTATAPIYTAHDKGLPVHVFADETRPRNQGAALTAWELGHHGVPH
                     TVIADNTGGHLMQHGLVDVVIVGADRVTAQGDVCNKIGTYLKALAARDNEVPFYVALP
                     SPTIDFTIDDGLAEIPIEQRAADEVAMVSGKTASGDIEKVRIVPDGSPVANFAFDVTP
                     ARLVTGLITERGIVQANRAALARAFPERAEVRPKSNRKVS"
     gene            4768..5613
                     /locus_tag="VIY07_18485"
     CDS             4768..5613
                     /locus_tag="VIY07_18485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6383780.1"
                     /translation="MPVDYEVEYDNRSRVPDHPEIFARWQRDAAAYRASAHNPKLGIG
                     YGPSSRRTMDLFPAKDDDQAPLAMFIHGGYWRSLEPSMFSQMAAGPNARGITVAVVGY
                     DLCPHCSISDIIEQMRSACLALWRKRRQRICVYGHSAGGHLAACMVAQDWKAIASDAP
                     DDLVPAAYAISGVFDLAPLVHCSQNLDLRLDEAEARRVSPLYWRVPPGRSLDAVVGAL
                     ESKEFLRQSSTIAESWQQRLALTRYEEIAGTNHFTVVDPLGNPDSAMTARVAAMAHSV
                     NNMAL"
BASE COUNT         1053 a         1765 c         1728 g         1112 t
ORIGIN      
        1 cgccgccggc ctggacgaaa aaattggagt tttgcgaaat ataaacctga aggaaacccc
       61 acatcagcat ctgcaccgcc ggccaataaa tcagatcgag aatccggggc cacgacgaac
      121 gcagcaggta ccaatagcgc cgcaccatgg ctgcaacgcg gttgaacgag aaattcatgc
      181 ccgtgtcact ggcgatcatt tcgcagcctc gctctgccgt cgcccgcgcg cgacatcgag
      241 aaatacctct tccagcgtct cgcggccgta gcgcgagagc agccggtcag gcttgtcgtc
      301 gtcctcgatg cggcctctgt gcatgataat gacccgttcg cacaatcgtt cgacctctgc
      361 catgttgtga gaggcaagca gtatcgtcgc cctctcttcg gcacggtatc gttcgagccg
      421 cgagcgcacc cagtctgccg tgtcaggatc aagcgaggcg gtcggctcat ccagcaacag
      481 cacttcgggc ttgttcagca gcgccttggc gagcgacacc cgcgtcttct ggccggcgga
      541 aagcttgccg gtcggccgat caagaaattc ggtgagatcg agatcggcgg ccaacctgtc
      601 gatccgttcg tcaatgtcgg ccaccgcgta aagctgggcg aagacggaaa gattttgcct
      661 cacggtcagg cgcatcggca cgtcgacgta ggggctctcg aaattcatcc ggtgcagcac
      721 gcgatagcgt tgcctcggca tctcggcgcc cagcacggtc acgctgccgg aggtcggcgt
      781 gaccagcccc atgatcatcg caatcgtcgt ggttttaccg gccccgttgc ccccaagcag
      841 cccggtcacc gaccccgggg gcaaccgaaa gctgatgccg tcgactgcag ccacgccttt
      901 atagcgcttg accagtcgat ccacggcgat ggcggaagca ttttgcgcat ccataggcgg
      961 aaacatgtga cgctgcaccg caagaagtgc aagccccgcg acgcgggttg caatttgtac
     1021 cgccgccgcc cggcgttaga ctgaatcatg gcctcgcccc ttacccaacc tcaccccggc
     1081 cgaaacgtgc gcctcgatac attggtgcgg ttgcgctggc ttgcaatcat cggccagacc
     1141 acggccgtcg tcgtggtcta ctatggactc gacttccagc ttccgattta cgcgtgtctg
     1201 gccgccatcg tcctcgcggc ttggctcaac gtggcgctgc gtttgcgttt ccatatgacg
     1261 caaagactcg agccggaccg cgcggcgtgg ctgcttgcct tcgacatcgc ggaactggcg
     1321 gtgcttttgt atctgaccgg gggtctgcaa aatccgttcg ccttcatgtt tctgggaccg
     1381 gtcttgttgt cggcgacggc gctgccaccg cggttcacgc ttctgctggg cggttttgca
     1441 gtcgcatgcg ccacgattct ggtattcgtg cattatcccc tgccgtggga cagcgaggat
     1501 ccattgcagc tgccgcccat ctacatgatg ggtgtctggc tgtgtatcct gctcgcgatc
     1561 ggtttcatcg gggcatatgc ctggcaaatc acggaagagt ctcgccagct ttccgacgca
     1621 ctcgccgcca ccgagctggt gctggcgcgc gagcagcatc tttcccaact tgacggactt
     1681 gccgccgcgg cggcacatga actcgggaca ccgctttcga ccatctctgt catcgccaag
     1741 gagctggagc gggcgatcgc gccggaggcg ccgcacggcg acgacgtgcg cctgttgcgc
     1801 gaacaggcga cgcgctgccg cgacattctt gccaagctca ccgaattgtc tgccggagga
     1861 gagccgtttg accgcatgcc tctcactgcg ctgatcgagg aggttgtggc gccgcatcgc
     1921 aatttcggcg tgagcatcga agtgatttcg ccaagcgatc gctccagcga gccggttgga
     1981 gcgcgcaacc ccgccattct ttatggcctc ggcaatctgc tggagaacgc ggtcgatttc
     2041 gcacgtgacc gcgttgcggt cgatgcgcat tggaacgaag attcggtcgc cgtcacgatc
     2101 agcgatgatg ggccggggtt tgcgccggaa atcctggccc gaattggaga accctacgtg
     2161 accacccggc ggcaccgtca ggacgataca ggcgaggagc cagcggggct tggtcttggt
     2221 ttctttatcg ccaagacatt gctggagcgg tcaggtgcta ccctctcatt tcaaaatcgg
     2281 cccgggccgg agcggggcgc cgttatcagg ctgaggtgga gccgcagcga tttcgaacaa
     2341 tcagcagcgt tcgcagccgc ttgagggagc ctcgcgagat cactatttgt tgcgtgcgac
     2401 tgataggtgt ccgcgctagg atgcgggtaa gggcagatgt ggtgagaccg tggacattgc
     2461 aacgagcgat accgcccgac cggcggcgaa agataaactc aacggcgaac ggtcgttgtt
     2521 gatcgtcgaa gacgattttt ccttcctgca gcggctcgcc aaggcactcg agcaacgcgg
     2581 attttcggtt acgaccgcgg agtcggtttc cgaaggctta ttgcaggtgg aaaaggcagc
     2641 gccggcctat gctgtggtcg atatgcgcct cggcgacggc aacggactcg acgtgatttc
     2701 tgcgctcaag cgccgtcgtc cggacgcgcg cggcatcatt ttgaccggct acggcaacat
     2761 cgcgaccgcg gtgaacgcgg tgaagcttgg cgcggtcgat tatctcgcca agcccgtcga
     2821 tgccgatgac gtcgttgcag ccttgttggc gttggacaac gccaagatcg agccgcccga
     2881 gaatccgatg tcggccgacc gcgtgcggtg ggaacacatt cagcgtatct atgagctgtg
     2941 cggccgcaat gtttcggaga ccgcgcgccg actcaatatg caccgccgga ccttgcaacg
     3001 cattctggcc aaacgcgcgc ccagataatc tgccaatatt tctccgccgt tcgtcccgcg
     3061 accctgcgct cgcttcacga tcgatgaagt gacctactcc gcctcccagt aaggtcctgt
     3121 cggatcggcc agcgattgca gccggatcgc ggcggcacgc gcaaacaaca acatcatcga
     3181 ttttcgtgtc gcggccgaca acctgtgttc gggcgcttca catttgaact cggcgccgaa
     3241 ggcatcggcc acgatcagcc cggtgtccgg cggaaaaatt tcgcacggca cgtcgacggt
     3301 cgtggcgaag aacaagcgat cgcagtgcgc ccgataatca atccatttct gatcggcgcg
     3361 aaaatcggcg atcgaggact tgatctcgat gatccagatc tcgccgctcg gatcgagcgc
     3421 gacaaggtca gcccggcgac cggacggcaa gggcagttcg ctcacaacgc agcgcccatg
     3481 cgcgtgcagc agccgcgcgg ttccgcgtgc aaccgcgagt gcagtctgcg actggcggcc
     3541 atcgaggggc atttgaaacg gagacgatgc caaggccatc agctgacctt gcgattcgat
     3601 ttgggccgga cttcggcacg ttcagggaaa gcgcgtgcaa gcgcggcacg attggcctgc
     3661 acgatgcccc gctcggtgat caacccggtg accagtcgcg cgggggtaac gtcgaaggca
     3721 aaatttgcaa ccggcgagcc atcgggaaca atccgcactt tctcgatgtc gccggaggcg
     3781 gtctttccgc tcaccattgc gacttcgtcg gccgcgcgct gttcgatggg aatctcggca
     3841 agaccgtcat cgatcgtgaa gtcaatcgtt ggcgaaggca gcgcgacgta gaacggcacc
     3901 tcgttgtcgc gggctgcgag tgccttgaga taagtgccga ttttattgca gacgtcgcct
     3961 tgcgccgtca cgcggtcggc cccgacgatg acgacgtcga ccagcccgtg ctgcataaga
     4021 tgcccgccgg tattgtcggc gatgaccgtg tgcggcacgc cgtgatggcc cagctcccag
     4081 gcggtaagcg cagcgccctg gttgcgtggc cgcgtctcat cggcaaaaac atggacgggc
     4141 aggcctttgt cgtgagccgt atagattggc gccgtcgccg tcccccaatc gacggtggcc
     4201 agccagccgg cgttgcagtg ggtcagcacg tttaccggtg cgcccttttt ggttgcgaca
     4261 atttcctcaa tgattggcag tccatagcgt ccgatggcct ggttgatcgc aacatcctca
     4321 tcggcgatct cgcttgcgcg ccgcaaggcc gcttccgcgc gctcggcgcg cggccggttg
     4381 cgcaccgcgc cccgtatttc gtccagcgcc catttgagat taatggccgt cggacgtgtc
     4441 gcaatcaggg tcgcacaggc atcgtccagt gcttcatcgg atgcgtcggc ccgcagggcg
     4501 agccagaggc cataggctgc cgacacgccg atcagcggcg cgccgcgcac ctgcatggtc
     4561 acgatcgccc gtgcgacatc ctcaagcgtg gcaagtcgta ccgtggcaaa gcgatgaggt
     4621 agcagcgtct ggtcgataat gccaaggctt gcgctatcgc tttcgaccca gatcgttcgc
     4681 atttgcttgc cgtcgatttt cattgctaag aaataacgcc gtttcacgtg ttgcgcaaag
     4741 ccaggtcatt cacgcccgag aaccgccatg cccgtcgact acgaggttga atacgacaac
     4801 cgctcccgcg tccctgacca tcccgagatt tttgcacgct ggcagcgcga tgcggcagcg
     4861 tatcgcgcga gcgcgcacaa ccccaagctc ggcattggat atggcccttc atcgcggcgg
     4921 accatggacc tctttccggc caaggacgac gaccaggcgc ccctcgccat gttcattcac
     4981 ggtggctatt ggcgctcgct tgagccttcg atgttttcac aaatggcagc aggaccgaat
     5041 gcgcgcggga taacggtcgc ggtcgtgggt tacgatcttt gcccgcattg ttcgatctcc
     5101 gacatcatcg aacagatgcg cagtgcctgt ctggccctct ggcgtaagcg gcgccagcgc
     5161 atctgtgtct acggtcactc ggccggcggg cacctggccg cgtgcatggt ggcgcaagac
     5221 tggaaagcta tcgcctccga tgccccggac gacctcgtgc cggcagcgta tgcgatctcc
     5281 ggggtcttcg atctcgcacc gttggtccat tgctcgcaaa atctggattt gcgtctcgat
     5341 gaggcggaag cgcgccgggt atcgccgctc tattggcgcg tgccgcccgg ccgcagcctg
     5401 gacgcagtcg ttggcgcgct ggaatcgaaa gagttcttgc gccagagcag cacgattgcc
     5461 gagtcatggc aacaacgctt ggcgctcacc cgctacgagg aaatagcggg cacaaaccac
     5521 ttcacggtcg tggatcctct cggcaatcca gatagtgcga tgaccgcacg ggtcgccgcc
     5581 atggcgcaca gcgtcaacaa catggcgctg tagatgatac acgctaaaac cagtagcgcc
     5641 gtgcaaatgc gattgtga
//
LOCUS       DATDHO010000936         1644 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_393136, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000936 DATDHO010000000
VERSION     DATDHO010000936.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393136"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..471
                     /locus_tag="VIY07_18490"
     CDS             <1..471
                     /locus_tag="VIY07_18490"
                     /inference="COORDINATES: protein motif:HMM:NF012892.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase C-terminal
                     domain-containing protein"
                     /protein_id="HEY6383781.1"
                     /translation="VEPSAPDVLRRRPRSPRAALLSPQFLLLIAWQGTLLAGIALAVY
                     AWALRVYGAGPHARTLALLALVAVQLGHMFNCRSRRHSAFTGLFRNPFVWLATAAVIG
                     LQLLALYLRPLARVLDTVVPTFTDWMVVGACIVAPIIVVEGTKLFARRKREQKG"
     gene            791..1189
                     /locus_tag="VIY07_18495"
     CDS             791..1189
                     /locus_tag="VIY07_18495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HEY6383782.1"
                     /translation="MVNLNDARKVIAAAEKKAEEIGQPMNIAVADAGGNLIAHARMDG
                     AWIGSIDISIKKAFTSRAFDIATKDLATHSQSGGQFFGIHASNDGRIMIFAGGVPLKR
                     DGKVVGAIGVSGGSGEQDHAVAEAGAKAFK"
BASE COUNT          328 a          435 c          531 g          350 t
ORIGIN      
        1 gtggagccga gcgcgccgga tgtgctgcgc cgccggcccc ggtctccgcg agcggcgttg
       61 ttatcgcccc aatttcttct actcatcgcc tggcagggaa cgctgctcgc cggtatcgcg
      121 cttgcggtct atgcctgggc attgcgtgtt tacggggcag gaccgcacgc gcgaacgctg
      181 gcgttgctgg cgctcgtggc cgtgcaactc ggtcacatgt ttaactgtcg ttcgcggcgc
      241 cattcagcct tcaccggcct tttccgcaat ccattcgtct ggctggcgac ggcggcagtg
      301 atcgggctgc agctactggc actctatctg agaccgctgg cgcgcgtgct tgataccgta
      361 gtgcccacgt tcaccgactg gatggtggtc ggcgcttgta tcgtggcgcc catcatcgtc
      421 gtggaaggca cgaagctgtt tgcccggcgg aaaagagagc agaagggctg acgatagttg
      481 cgaggatgcg caatcaggaa tacaaaacgg ctgtccttcg cgggtcgtag tgacaatccg
      541 ggatgcgaag aggcaacgcc gcgagcgatc caggttgaag tggcgtaagg ggagagctta
      601 tcatggcgcg tcacgatagt tacccaattg cgtttcccat actcgacgat gcacagatca
      661 cggcattggg ccattcgcga cattcgagcc gttccacgtg gcgcagacca gagtttgccg
      721 cggcgtgagc gttcatggaa tagcgaatag agggggaaac agtcatggat ctgctcatag
      781 gaggtctttc atggtcaacc ttaacgatgc aagaaaagtg attgctgctg ctgagaagaa
      841 ggccgaggaa attggccaac ccatgaacat agcggtcgcc gacgcgggag gcaacctgat
      901 cgctcacgcg cgcatggacg gggcctggat tggtagtatt gatatttcca tcaagaaggc
      961 gtttacgtcg cgcgccttcg atattgccac gaaggatctg gcgacacatt ctcaatccgg
     1021 gggacagttt ttcggcattc atgcgtccaa cgatggacgg atcatgatct ttgcaggcgg
     1081 cgttccgctc aaacgggacg gcaaggtggt tggcgccata ggggtgagcg gcgggtcggg
     1141 cgagcaagac catgctgtgg ctgaggcagg cgccaaggcg tttaagtagg atctgaaaat
     1201 aatagtcggg aattactcac ctacgatcct ggtcctcaat gcgatcgctg gatcgctcgc
     1261 ggagcacggc agtctgctct cccgcagctt gatcggcagt tgcgcccgcg agcgcgccag
     1321 ccgccagcta tcattaatct tgcgcgagcc ctggacggac gggtatcgat ggctggccat
     1381 gcccgttctg gtgtgagtgt tgtgcaattc aaaggccggg gccgtcattc ctggttatgt
     1441 gcgacgatct ggcaccaagc ttgcaagacg cagggtagtg tttcggacac cgcgtgaatc
     1501 ggcggcattc cgattcaaga agacagagtg ttcgagccaa gagaatgctg cgagcggcgc
     1561 tagaaccgct ccgctctcgt tgggaattaa tgatttatcg gggcggcgtt tgggtcagta
     1621 cagggaaaat tgccccggtt tgga
//
LOCUS       DATDHO010000937         3343 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_44890, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000937 DATDHO010000000
VERSION     DATDHO010000937.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3343
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44890"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1324)
                     /locus_tag="VIY07_18500"
     CDS             complement(<1..1324)
                     /locus_tag="VIY07_18500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383783.1"
                     /translation="MTVSPDARARPSWFDAAAVYLKPRVLIVMFLGFSSGLPLALSGA
                     TLLVWMRESGVDLGTIGLFALVGTPYTVKFLWAPITDAIDVPLLSRWLGRRRGWLVFT
                     QILLMAAIVFLGSCNPAAAPGLVALGALLVATASATQDIVVDAFRIESLPENEQAAGM
                     ASYVAAYRIGMLISTAGALFLVSAIEATGFDKQAAWRLGYFAMAALVLIGTMTALVAT
                     EPERSAEANAAHASQNPLARMITTAIGAFKDFLGHELALVMLAFVVLFKFTDALSGAM
                     TAPFVIDLGFTRNEYAAIVKGVGLGALLLGGFAGGFIARALPLATSLWIGGVLQAVAN
                     LSFSALAVVGTDTTMLAAAIIAENFTSAIGTVMFVAYLSALCQNPLHTATQYALLTAL
                     AAVGRTYLSSGAGFIAESTGWVWFFVICMLAGIPSLLLLAWLQKRGHFK"
     gene            complement(1328..2461)
                     /gene="rmuC"
                     /locus_tag="VIY07_18505"
     CDS             complement(1328..2461)
                     /gene="rmuC"
                     /locus_tag="VIY07_18505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEY6383784.1"
                     /translation="MYDFHSFGNALMAHAPELTLAIGAIVAVGIAVVIVMLLRPRRPP
                     PDPVAEQRMADLNARVQIMAELLAKAQAQLQQTVHERLDAVTARLGESMQMSTKHTAE
                     HLQQLHARLAVIDGAQKNITDLASQVTSLQTVLSNKQSRGAFGQARMEMIIQDGLPKD
                     CYEFQATLTNKARPDCVVHLPDGPHLVIDAKFPLEAVTAFRESTSEDERKLAIARVRT
                     DIAKHVGDIAARYLIPGETQDMALMFVPSESIYAELYDSFDDIFQKAYRAKVIIVSPS
                     LLMLAIQVIQQIRRDARMREAAGRILTEVRLLVEDVIRLRDRVTNLEKHFGQANGDIR
                     QILVSTDKIVSRGERIQDVEFADEPPSADILPGPGARRLEAGE"
     gene            2586..3146
                     /gene="def"
                     /locus_tag="VIY07_18510"
     CDS             2586..3146
                     /gene="def"
                     /locus_tag="VIY07_18510"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007529610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEY6383785.1"
                     /translation="MTIRDILIIPDKRLRLKSEAVKTVDKSLRALIDDMFETMYAAPG
                     IGLAAIQIGVPKRVVTMDLAKKEEPKQPQVFINPEVVWVSDEKATYEEGCLSIPEYYE
                     EVERPKAVKVKYLDADLRPQEIEADGLLATCLQHEIDHTNGVLFIDHISKLKRDMVVK
                     KFKKAAKKSEGVKPLAEDPEPSHHIG"
BASE COUNT          722 a         1018 c         1002 g          601 t
ORIGIN      
        1 gtttgaaatg tccgcgtttc tgcagccagg ccagcagcaa caggcttgga atgccggcca
       61 gcatgcagat cacaaaaaac cagacccaac cggtcgactc ggcgatgaaa cctgcgcccg
      121 aggacaaata tgtgcgaccg accgctgcca gcgcggtcaa aagcgcgtac tgcgtcgccg
      181 tatgcagcgg attctgacaa agagccgata gatacgcgac gaacatgacg gtgccgatcg
      241 cgctggtgaa attctccgcg atgatcgcgg ctgcgagcat cgtcgtgtcg gtgccgacca
      301 ccgccagggc gctgaacgac aggttcgcga cggcctgcag aacgcccccg atccacaggc
      361 tggttgcaag cggaagcgcg cgggcaatga atccaccggc gaaaccgcca agcagaagcg
      421 cgccgaggcc cacgcctttc acgatcgccg catactcgtt gcgggtaaac cccaggtcga
      481 tcacgaacgg cgcagtcatg gcgcccgaca gcgcatcggt gaacttgaac agcaccacga
      541 aagccagcat taccagggcg agctcatggc caaggaagtc cttgaatgcg ccgatcgcgg
      601 ttgtgatcat gcgtgcgaga ggattctggc tggcgtgagc ggcgttcgct tccgccgacc
      661 gctcgggctc ggtcgccaca agcgctgtca tcgtgccgat cagcaccagc gccgccatgg
      721 cgaaatatcc caggcgccac gcggcctgtt tgtcgaagcc ggtggcttcg atcgcactca
      781 ccagaaaaag cgcgccggcg gtggaaatca gcatgccgat gcggtaggcg gcgacatagg
      841 aggccattcc ggcggcttgt tcgttttccg gaaggctttc gatacgaaaa gcgtccacca
      901 cgatgtcctg cgttgcagat gccgtcgcca ccaaaagcgc gccgagcgcg accagcccgg
      961 gcgcggcggc gggattgcag gagcccagga atacgattgc cgccatcagt aggatttggg
     1021 tgaacaccag ccacccgcgt cgccgcccca gccagcgcga gagcagcggt acgtcgatcg
     1081 cgtcggtgat cggcgcccac aggaatttca ccgtgtaagg cgtgccgacc agcgcaaaca
     1141 gtccgatggt gccgagatcc actccggatt cacgcatcca gaccagtagc gtcgcgcccg
     1201 agagggccag cggcaggccc gacgaaaacc cgagaaacat gacaatcagg acgcgcggct
     1261 tgaggtagac cgctgccgcg tcgaaccagg acggccgagc ccgcgcgtcg ggggaaactg
     1321 tcattgccta ttcgccggct tcaagcctgc gcgcgccggg gccgggcaga atgtctgcgc
     1381 tcggcggttc gtccgcgaac tcgacatcct ggatcctttc cccgcggctg acgatcttgt
     1441 cggttgatac caggatctgc cggatgtcgc cgttggcctg gccgaaatgc ttttccaggt
     1501 tcgtaacccg atcccgcaga cgaataacat cctcaaccag aaggcgcact tcggtcagaa
     1561 tcctgccggc cgcctcgcgc atgcgcgcat ccctccggat ctgctggatc acctggattg
     1621 ccagcatcaa caaagacggc gaaacgatga tcaccttggc acgataagcc ttctggaaga
     1681 tatcgtcgaa gctgtcatag agctccgcgt aaatcgattc agagggtacg aacatcagcg
     1741 ccatgtcctg ggtctcgccc gggatcaggt acctggcggc gatgtcgccg acgtgcttgg
     1801 caatgtcggt gcggacgcgg gcgatggcaa gcttgcgttc gtcttcgctt gtcgactccc
     1861 gaaacgccgt caccgcctca agcgggaatt ttgcgtcgat gacaaggtga ggaccgtcag
     1921 gcaagtgcac gacgcaatcc ggccgagcct tattggtcag cgtggcctgg aactcgtagc
     1981 aatccttcgg caggccgtcc tggatgatca tttccatccg cgcctgtccg aaggcgcccc
     2041 gcgactgctt gtttgacagc acagtctgca ggctcgtcac ctgcgaggcg agatcggtaa
     2101 tatttttctg cgcgccgtcg atcacggcga gccgcgcatg caactgctgc agatgctcag
     2161 cagtatgctt cgtcgacatc tgcatcgatt cgcccaatct ggcggtcacc gcgtcgagcc
     2221 gttcatgcac tgtctgctgc aattgggcct gggccttggc gagcagttcg gccatgatct
     2281 gcacccgcgc attcagatca gccatccgct gctcggcgac ggggtcgggg ggcggcctgc
     2341 gcggccgcaa tagcatcacg atgacaacgg caatcccgac tgcgacaatg gcgccgatgg
     2401 ccagagtaag ctcaggcgca tgcgccatta gcgcgttacc gaaggagtga aaatcgtaca
     2461 ttcgatgctt ctaccgtgat tcgcgcggcc gtgcgaacga agagcgaacg gtaggaggat
     2521 aaccccgtaa tctcaagggg aaacgccgca ttgaccgcgt taccccaacc gcttacatcg
     2581 cgaccatgac gatccgtgac attctcataa ttcccgacaa gcggttgcgg ctgaaatcgg
     2641 aggcggtgaa gaccgtcgat aaatcgctac gcgctctcat cgacgatatg ttcgagacga
     2701 tgtatgccgc gccgggtatc ggccttgcgg cgatccagat aggcgtgccc aaacgcgtcg
     2761 tcaccatgga cctcgccaag aaagaggagc cgaagcaacc gcaagtgttc atcaatccag
     2821 aggtcgtctg ggtttctgac gaaaaggcga cttacgaaga aggctgcctt tctattcccg
     2881 aatactacga agaggtcgaa cgcccgaagg cggtgaaagt gaaatatctt gatgccgatc
     2941 tcaggcccca ggagattgag gccgatggct tgctggccac atgcctgcag cacgaaatcg
     3001 accataccaa cggcgtgcta ttcatcgatc acatatcgaa gctcaagcgc gacatggtgg
     3061 tgaagaaatt caagaaagcg gcaaagaagt ccgaaggcgt caagccactt gccgaggatc
     3121 cggagccttc gcatcatatc ggctaacttg ttcttggtcg tcatgcccgg ccattgccgt
     3181 ccaaaaggac ggcgtgcttt cgcacgccta tgtgccgggc atccacgttt ttgcagaggt
     3241 agagtaatag gaacgtcgtg gatggccggg actagcccgg ccatgacaac cgatccacgc
     3301 ccggacgaat gatgtcattg cgtctgattt tcatgggcac tcc
//
LOCUS       DATDHO010000938         2542 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_44999, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000938 DATDHO010000000
VERSION     DATDHO010000938.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_44999"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VIY07_18515"
     CDS             complement(<1..553)
                     /locus_tag="VIY07_18515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="double zinc ribbon domain-containing protein"
                     /protein_id="HEY6383786.1"
                     /translation="MNELVSARPEQPPSHAVRLRENMRAALRLILDFALPPLCPSCRE
                     PLGEGTALCAPCWSQLSFIEPPYCARLGIPFAYDPGSGLLSMEAIANPPAYDRARAAV
                     RYDAVARILVQAFKYSDRLDLAPMMGSWMARAGRELFVDSDALVPVPLHWRRRWARRF
                     NQSAALAEAISALCGVPVSHSGLK"
     gene            618..1520
                     /locus_tag="VIY07_18520"
     CDS             618..1520
                     /locus_tag="VIY07_18520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEY6383787.1"
                     /translation="MSPGPLIFDRQLLHVRQSRARALGPATFLLDRAATELAERLSAV
                     MRRFELAVDLGTPTDAVRRALAASGKIGTIVAAADAFDRDSSYLRVAADEEALPFADQ
                     SLDLVVSALSLQFVNDLPGTLIQIRRALKPDGLMLAALIGGDSLTELREVFAAAETEI
                     EGGVSPRVAPFADVRQLGALLQRAGFALPVIDSERLIVRYDSVFALVRDLRHMGATNV
                     LIERRRKPLKRATVERMAQLYAERFANPDGRVRASFEIIWLSGWAPHESQQKPLMPGT
                     ATRRLSDALNTKEISAGEKAGRSG"
     gene            complement(1517..1924)
                     /gene="mutT"
                     /locus_tag="VIY07_18525"
     CDS             complement(1517..1924)
                     /gene="mutT"
                     /locus_tag="VIY07_18525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HEY6383788.1"
                     /translation="MVSSQIVLVAACALVDADGRVLIAQRPKGKPMSGLWEFPGGKIE
                     NGERPEDTLIRELREELGITVSDACLAPLAFASHSYPDFHLLMPLYVCRRWEGTVVAT
                     EGQQLAWVKPNRLRDYEMPPADIPLISHLMTLL"
     gene            complement(1927..>2542)
                     /locus_tag="VIY07_18530"
     CDS             complement(1927..>2542)
                     /locus_tag="VIY07_18530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional ornithine
                     acetyltransferase/N-acetylglutamate synthase"
                     /protein_id="HEY6383789.1"
                     /translation="AAALQSLLKDSATDTFNAVTIDGDTSTSDTLMMFATGKAADAPR
                     IARAADPRLKDFKRALHGVMANLSEQIARDGEGARKLVEIIVEGAASKASARRIAMSI
                     ANSPLVKTAIAGEDANWGRVVMAVGKAGEPANRDKLSIWFGGIRVAHKGARDPGYDEA
                     SVSAAMKKPEISLKVALGLGKGRDRVLTCDLTKEYVAINGDYRS"
BASE COUNT          468 a          778 c          800 g          496 t
ORIGIN      
        1 gcttgagtcc ggagtgggaa acgggcacgc cgcagagtgc cgagatcgcc tcggcgagcg
       61 ctgccgattg gttgaagcgc cgcgcccagc gccgccgcca atgcaagggc actggtacga
      121 gagcgtcgct atcaacaaat agctcccggc cggcgcgggc catccaactc cccatcatcg
      181 gggcaaggtc gagccggtcg ctgtatttaa aggcttgaac caggatccgg gcgacggcgt
      241 cgtaacgtac tgcggcccgc gcgcggtcgt aagccggtgg attggcgatc gcttccatcg
      301 acaacaagcc gcttccggga tcataggcaa agggaattcc aagccgtgcg cagtacgggg
      361 gctcgatgaa agacagttgc gaccagcatg gcgcgcacag ggccgtgccc tcgcccagcg
      421 gctcgcggca ggacggacaa agcggcggca aagcgaagtc caaaataagc cgcaacgccg
      481 cccgcatgtt ctcacgaagg cggactgcgt gtgatggcgg ttgctccggt cttgccgaaa
      541 ccagctcgtt catgctgcaa ccgtagcatg agcattccgc gatgacagga gcaggattcg
      601 cgcaacagga caaagcgatg tcgccaggcc ccctgatctt tgaccggcaa ttgctgcacg
      661 tccgccagtc gcgcgcgcgg gcgcttgggc cggcgacatt tttgctggac cgcgccgcca
      721 ccgagctggc cgagcggctt tccgcggtca tgcgccggtt tgaacttgca gtcgatcttg
      781 gcacgccgac ggacgcggtg cgccgtgcgc tcgctgcgag cggaaagatt gggacgattg
      841 tcgcagccgc cgatgcattt gatcgcgaca gctcatacct gcgtgtggct gccgatgagg
      901 aagcgctgcc gtttgccgat caatcgcttg atctggttgt ctcagcgctg tccctgcaat
      961 ttgtcaacga tttgcccggg acattgatac agattcgtcg cgcattgaag ccggacggtc
     1021 tgatgcttgc ggcgctgatc ggaggcgata gcctgaccga gttgcgcgaa gtatttgctg
     1081 ccgccgagac tgagatcgaa gggggagtgt cgccgcgcgt tgccccgttc gcggatgtac
     1141 gccaacttgg cgcattgttg cagcgtgcag ggtttgcgct gcccgtgatc gacagcgagc
     1201 ggttgattgt gcggtacgat tcggttttcg cgctggtgcg cgatctgcgc catatgggcg
     1261 cgaccaatgt attgatcgag cgccggcgca agccgctcaa acgggcgaca gtcgaacgca
     1321 tggcacagct ctatgctgag cgttttgcca accccgacgg tcgcgtgcgg gccagcttcg
     1381 agattatctg gctgtcgggt tgggcaccgc atgaaagtca gcagaagccg ctcatgccgg
     1441 gtacagccac gcggcgactt tccgatgccc tgaacaccaa ggaaatatcg gccggggaaa
     1501 aagcgggacg ctcgggctag agcagcgtca tcaggtgaga aatgagtgga atgtccgccg
     1561 gcggcatttc gtagtcgcgc agccggttcg gctttaccca ggcgagttgc tggccttccg
     1621 tcgcaacaac cgttccctcc cagcggcggc acacatacag cggcatcagg agatggaaat
     1681 cagggtaact gtggctggcg aaggcaagcg gtgcgagaca ggcgtcgctg acggttattc
     1741 caagctcttc tcttagctcg cgtatcagcg tgtcctctgg gcgctcgcca ttctcaattt
     1801 tgccgcccgg aaattcccac agccccgaca tgggcttgcc tttgggcctc tgtgcgatca
     1861 acacgcggcc gtccgcgtcg accagggcgc aggcagcaac gaggacgatc tggctggaca
     1921 cgatcgctac gaccgatagt cgccattgat ggcaacgtat tccttcgtca aatcgcatgt
     1981 cagtacccgg tcgcgaccct tgccgagacc cagcgctact ttcaggctga tctccggctt
     2041 tttcatcgcc gcgcttacgc tcgcctcgtc atagccagga tcgcgggcgc ccttgtgtgc
     2101 aacacgaatg cctccgaacc agatcgagag tttgtcgcga tttgccggtt cgcccgcctt
     2161 tcccaccgcc atgacgacac ggccccaatt ggcgtcctcg cccgcgatcg cggtcttcac
     2221 gagcggtgaa ttggcgatcg acatggcgat ccgacgtgcg gaagccttcg atgcggcgcc
     2281 ttctacgatg atttcaacca gcttgcgcgc gccttcgccg tcgcgcgcga tctgttctga
     2341 aagattggcc atcacgccgt gcaaggccct cttgaaatcc ttcaaccgtg gatcggctgc
     2401 acgcgcgatg cgtggcgcat ccgccgcctt tcccgtggcg aacatcatga gcgtatcgga
     2461 cgtcgaagtg tcgccatcga ttgtcacggc gttgaatgta tccgtggcgc tatccttcag
     2521 cagagattgc agggcggctg cc
//
LOCUS       DATDHO010000939         3459 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_45017, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000939 DATDHO010000000
VERSION     DATDHO010000939.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45017"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            87..290
                     /locus_tag="VIY07_18535"
     CDS             87..290
                     /locus_tag="VIY07_18535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383790.1"
                     /translation="MPKNTNVFLADDGLRAVFNNHDELMQIHPAAAETVPTNFTRNTI
                     LPFHVRAARWYNNNALAGSLRGD"
     gene            complement(312..2006)
                     /locus_tag="VIY07_18540"
     CDS             complement(312..2006)
                     /locus_tag="VIY07_18540"
                     /EC_number="1.1.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HEY6383791.1"
                     /translation="MTGKSLDEVETSLSGYELLNEPLLNKGTAFTEAERDKFDLHGLL
                     PPHVSQLDYQVQRRLEAFRGLHTDMQRYTFLRGLQDSNEVLFYAMLTRNIEEMMPIVY
                     TPTVGLGCQLFSHIFRKPRGLFLSVPHKQDIRRIIAHPRYDYVDAIVVSDGERILGLG
                     DQGAGGMGIPIGKLSLYSACAGLHPATTLPIILDVGTDNEKLLADPLYIGWQHRRVRG
                     AEYDDFVETFVTAVRERWPHVLLHWEDFAIGNANRLLAKYRDQLCTFNDDIQGTAAIA
                     VGTLLSAINVTGIPLTQQRVVVFGAGSAGSGISALVARAMVEAGLSETEARSRFYLVD
                     RDGLLVEGMAGLQSFQMPFTQRRDTLASWKLETPGRIGLNDVISNANPTALIGTSGQP
                     NAFIEKIVREMASRTARPIIFPLSNPTERSEATPAQLDDWTEGRAVIGTGSPFPPLKR
                     NGNAFRVDQTNNAYVYPGIGLGAIATGSQRISDGMFLAAAHAVAAHSPAKSDPRANLL
                     PPLRDIREVTFHVAVAVGKQAQKEGLTRPMADEAIAAAVRAKMWKPLYPSYKRVKK"
     gene            complement(2003..2842)
                     /locus_tag="VIY07_18545"
     CDS             complement(2003..2842)
                     /locus_tag="VIY07_18545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003540562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6383792.1"
                     /translation="MHIFDEPKIDCHAHVIDPAHFPYGKNIAYKPAGQEIGTTAQFRR
                     VMSCYGVKHALLVQPNSGYEGDNSCLLDAIAKGEGRFKGIAIVDLDTGVTVLKNLQAQ
                     GIIGVAINPTFHGNEYYRDTAGLMKRLADLDMFLDLQVENDQFLMYEPWIASIPVKVL
                     IDHVGRPTPPAGLGQPSFAAILRLAGTGRVSLKLSGYLKFARSPYPFEDCWPFVRALI
                     DAFTLDHCMWASDWPYLRAQERQDYGPLVQLAGELFPNAPDRRKLFWETPNRLFNFAA
                     KNQ"
     gene            complement(2851..3264)
                     /gene="mce"
                     /locus_tag="VIY07_18550"
     CDS             complement(2851..3264)
                     /gene="mce"
                     /locus_tag="VIY07_18550"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HEY6383793.1"
                     /translation="MKVKRIEHVAIAVKNMTQSRKIFEEKLGFKLEYEEYLPQYSTRL
                     AMYPIGSTYIELLESDRQDTETARWIAERGEGLFHICLEVEGIEEALEELRGKGVKLL
                     DERPRIGHANSRIAFIDPESTGNVLIELVELPNPS"
BASE COUNT          711 a          999 c         1017 g          732 t
ORIGIN      
        1 cccggccatc cacgtcttgt ttgttgacac gctgaagaaa tgacgtggat gcccgcgagt
       61 accgcgggca tgacgggtga gaggccgtgc ctaaaaacac aaatgttttc ctggctgacg
      121 acggtctccg tgccgtcttc aacaatcacg acgaactgat gcagatccat cccgccgcgg
      181 cagagacggt tccgacgaat ttcacgcgca acactatcct gccgttccac gttagggccg
      241 cccgctggta caacaacaat gccctcgccg gcagcttgcg cggagactga cgccaggcgt
      301 ttctgaaatc gctacttctt gacccgcttg tacgacgggt agagcggctt ccacatcttg
      361 gcacgaaccg cggcggcaat cgcttcatcc gccatcgggc gagtaaggcc ttccttctgc
      421 gcctgtttgc cgacggcgac cgcaacgtga aaagtgacct cgcgtatgtc gcgcaacggc
      481 ggaagcaggt tggcgcgcgg atcggacttg gctggactat gtgccgcgac ggcgtgagcg
      541 gcagcgagga acatgccgtc cgatatccgt tgcgaacctg tcgcgatcgc gccgagccct
      601 atgccaggat agacataggc attgttcgtc tgatcgacgc ggaatgcgtt gccattgcgc
      661 ttcagcgggg gaaatggact gccggttccg atgacggcgc ggccttcggt ccagtcgtca
      721 agttgcgccg gcgtggcctc actgcgttcc gtgggattcg agagcgggaa aatgatcggg
      781 cgggccgtgc gactcgccat ctcgcgcacg atcttttcga tgaaggcatt cggctggccc
      841 gacgtgccga tcaaggctgt tgggttcgcg ttgcttatga catcgttgag gccgatgcgg
      901 cccggcgttt cgagcttcca gctggccagg gtgtcacgcc gctgggtaaa cggcatttga
      961 aaggattgca acccggccat gccttcgacc agcaacccgt cccggtcgac gagatagaac
     1021 cggctgcgcg cttccgtctc gctcaatccg gcttcgacca tggctcgcgc gacaagcgca
     1081 ctgatgccgc ttcccgcaga ccccgccccg aacacaacaa cgcgttgctg agttagcgga
     1141 atgccggtga catttatcgc actgagcagg gttccgactg cgatagcggc cgttccctga
     1201 atgtcgtcgt tgaaggtgca taactgatca cggtattttg cgagcagccg gttcgcgttg
     1261 ccgatcgcga aatcctccca gtgcagaagc acgtgcggcc atcgctcgcg caccgcagtg
     1321 acaaaagttt cgacaaagtc gtcgtattcg gcgccgcgca cccggcggtg ctgccagccg
     1381 atatatagcg ggtcagcaag aagtttctcg ttgtcggtgc caacatccag gatgatcggc
     1441 agcgtggtcg caggatgcag gccggcgcat gcgctgtata gcgacaattt tccgatcgga
     1501 atgcccattc cgccggcacc ctggtcgccg agaccgagga tccgctcgcc gtcgctgaca
     1561 acgatggcgt cgacgtaatc gtaacgggga tgagcgatga tccgacggat atcctgttta
     1621 tgcggcacgc tcaaaaagag cccgcgaggc ttgcggaaaa tgtggctgaa aagctggcag
     1681 cccaagccga ccgtcggggt atagacgatc ggcatcatct cttcgatgtt ccgggtcaac
     1741 attgcgtaga acagaacttc gttggagtcc tgcaacccgc gcaggaacgt gtacctttgc
     1801 atgtcggtat gaagtcctcg aaaggcttca agccgccgct gcacctgata atcaagttga
     1861 gacacatgcg gcggcagcag cccgtgcaag tcgaacttgt cccgttcggc ttcggtaaag
     1921 gccgtccctt tgttgagcaa cggctcgttg agcagctcgt agccgctcaa tgaagtctcg
     1981 acctcgtcca ggcttttacc ggtcattggt ttttggccgc gaagttgaac aagcgatttg
     2041 gcgtctccca gaaaagtttg cgccgatccg gggcatttgg gaacagctca ccggccagtt
     2101 gcacaagcgg cccataatcc tgccgttcct gggcgcgcag gtaaggccag tccgatgccc
     2161 acatgcagtg atcgagggtg aacgcatcaa tcagcgcgcg aacgaacggc cagcaatcct
     2221 cgaacggata aggcgagcgg gcgaatttca ggtagccgga aagcttcagg cttactcgtc
     2281 ccgtgccggc caatcgaaga atggctgcaa aggacggctg gccgaggcct gccgggggtg
     2341 ttggtcgccc gacatgatcg atcaggacct tgaccggaat tgatgcgatc cacggctcgt
     2401 acatcaggaa ctggtcgttt tcgacttgca gatccagaaa catatcgaga tcggcaagcc
     2461 gcttcatcag gccggcggtg tccctgtaat actcgttgcc gtgaaatgtc ggattgatcg
     2521 cgacgcctat gatgccctgc gcctgcaaat tcttcaggac agtgacgccg gtatccagat
     2581 cgacgattgc gatgcccttg aagcgcccct cgcctttcgc gatcgcatcg aggaggcagg
     2641 aattgtcgcc ttcgtatccg gaattaggct gcaccaggag tgcatgcttc acgccgtaac
     2701 agctcatgac ccgccggaat tgcgccgttg ttccgatttc ctgtccggcg ggtttgtagg
     2761 caatgttctt gccgtatgga aaatgggccg gatcaatcac gtgtgcgtgg cagtcaatct
     2821 tcggctcgtc gaaaatatgc atcggaccga tcaagatgga tttggcagct ccaccagctc
     2881 gatcaggaca tttcccgtcg attccggatc gatgaaagca atacgcgaat tcgcatgccc
     2941 gatccgcggg cgctcgtcga gcagcttgac accctttcct ctcagctcct cgagcgcttc
     3001 ttcaatgcct tcaacctcaa ggcagatgtg aaacagaccc tcgccgcgct cggcaatcca
     3061 acgcgcggtt tccgtgtctt ggcgatctga ttcgagcagc tcgatatagg tcgacccaat
     3121 cgggtacatg gcaagccggg tggagtattg cggcagatac tcctcgtatt cgagtttgaa
     3181 cccgagcttt tcttcgaata tttttcggct ttgggtcata tttttaacgg caatcgcaac
     3241 atgctcgatg cgtttgacct tcatggagtt actccggtta cttcaaaatg aggcgtcaga
     3301 ttgcggtgag agcggatagg catgagccgc tattatgaac gcgcaatctg aaagcaccag
     3361 aggtcaggcg gcatcactca agccaatgta aagttagaga catgccgtcc acgcgctttc
     3421 ggaactggat cgagcttgat gccgagacgc aggcgcggg
//
LOCUS       DATDHO010000940         2683 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_295277, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000940 DATDHO010000000
VERSION     DATDHO010000940.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295277"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..895
                     /locus_tag="VIY07_18555"
     CDS             <1..895
                     /locus_tag="VIY07_18555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HEY6383794.1"
                     /translation="MKPTYGRCSRWGIVAFASSLDQAGPFTRTVRDAAILLRSMAGPD
                     PKDTTCADLPVPDYEAAVGKSVKGLRIGIPREYRLDGMPSEIEKIWKQGSAWLKAAGA
                     ELVDVSLPHTKYALPAYYIVAPAEASSNLARYDGVRYGLRVPSRDIIEMYEKTRSDGF
                     GAEVRRRLMIGTYVLSAGYYDAYYLRAQKVRTLIKKDFEACFKSGIHAMLTPATPSAA
                     FGLGEKGGADPVEMYLNDVFTVTVNMAGLPGISVPAGLDSQDLPLGLQLIGRPFDEET
                     LFSLATVIEQAAGHFSPEPWW"
     gene            complement(899..1054)
                     /locus_tag="VIY07_18560"
     CDS             complement(899..1054)
                     /locus_tag="VIY07_18560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383795.1"
                     /translation="MKNESNGRFGIIVGGVVAVIAAIFILSGGELGGKKTVEGDQDLP
                     PVTTTDK"
     gene            1295..>2683
                     /gene="gatB"
                     /locus_tag="VIY07_18565"
     CDS             1295..>2683
                     /gene="gatB"
                     /locus_tag="VIY07_18565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017486316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEY6383796.1"
                     /translation="MTAQPDPKNLLKGATGDWEIVIGMEVHAQVTSKAKLFSAASTEF
                     GGPPNSHVALVDAAMPGMLPVINEECVRQAIRTGLGLKAKINLKSVFDRKNYFYPDLP
                     QGYQISQYKSPIVGEGTVTVDLENGDSVTVGIERLHLEQDAGKSLHDRHPNYSYVDLN
                     RSGVALMEIVSKPDLRSADEAKAYVAKLRSILRYLGTCDGDMEKGNLRADVNVSVRKP
                     GDPLGTRCEIKNVNSIRFIGQAIEHEARRQIEIIEEGGTIEQETRLFDAARGETRSMR
                     SKEEAHDYRYFPDPDLLPLEFDHAYVDELKKHLPELPDEKKGRFMREFALSGYDAGVL
                     VAERETADYFEAVAKGRDGKTAANWVINELFGRLNKEGQDISTSPVTADQLGTMLDLI
                     KDGTISGKIAKDLFEIVWNEGGDPRSMVEQRGMKQVTDTGAIEKVVDDIVGKNPDKVA
                     DARSNPKAIGWFV"
BASE COUNT          590 a          772 c          815 g          506 t
ORIGIN      
        1 catgaagccg acctacggcc gctgctcgcg ttgggggatt gtggccttcg cctcatcgct
       61 cgatcaggca ggaccgttca ctcgcacagt ccgcgatgcc gcaatcctcc tgcgctcgat
      121 ggccggtccc gatccgaagg acacgacatg tgccgacctg ccggtgcccg actacgaggc
      181 tgccgtgggc aaatcggtga aagggctgcg gatcggaatt ccgcgcgaat accgtctcga
      241 cggcatgcct tccgaaatcg aaaaaatctg gaaacagggg agtgcctggc tgaaggcagc
      301 gggagcggaa ttggtcgacg tttcgcttcc ccacaccaag tatgccttgc cggcctatta
      361 catcgtggcg ccggcggaag catcgtccaa tctcgcgcgc tatgacggcg tgcgctatgg
      421 gctgcgcgtt cccagccgcg atatcatcga gatgtatgag aaaacgcgca gcgacggttt
      481 cggcgccgag gtgcgccggc ggctgatgat cggcacatac gtgctctcgg cgggctacta
      541 tgatgcctac tacctgcggg cgcagaaagt acgcacgctg atcaagaaag acttcgaggc
      601 ctgcttcaaa tccggcatcc acgccatgct cacgccggcg acgccctcgg ccgcattcgg
      661 tctgggcgag aagggcggcg ctgatccggt cgagatgtat ctgaacgacg tgttcacggt
      721 cacggtgaac atggccggac taccgggaat ctccgttccc gcgggcctcg actcgcaaga
      781 ccttccgttg ggactgcagc tgatcggccg cccgttcgac gaggagacgc tattttcgct
      841 cgccacggta atcgagcaag ccgcgggaca tttcagtccg gaaccgtggt ggtgacgtct
      901 acttgtccgt tgtcgtaacc ggaggaaggt cctgatcccc ctcgacggtt ttctttccgc
      961 ccagctcgcc gccgctgaga ataaagatgg cggcaatgac ggcgacaact ccgccgacga
     1021 tgatcccaaa tctgccgttg ctttcgttct tcatgacgtc attccaacgt ctgctgcctg
     1081 aacgtggttc cgactgggtg agccgtgaat ccggcgaaaa tcgtcgcaga aatcgggcca
     1141 tttcgtgaaa taacgcccgc ggctcgagca atgcagccgt gccaaaatgc ttgggtgatt
     1201 ttgatacctg cgcgaatgac ttgcggcgga caggcaggag tcgctacgac atgttgtggc
     1261 attcgaactt tgtcgaaaaa ataatcagga tcagatgacc gctcagcccg accccaaaaa
     1321 cctcctgaaa ggcgcaaccg gtgactggga aattgttatc ggcatggagg tccacgcgca
     1381 ggtcacgtcc aaggcaaagc tcttctcagc cgcatcaacg gagttcggcg gacctcccaa
     1441 tagccatgtt gcgctggtcg atgccgcgat gcccggcatg ctgcctgtaa tcaatgaaga
     1501 atgcgtgcgg caggcaatcc gcaccggact cgggctcaag gcaaagatca atctcaaatc
     1561 agttttcgac cggaagaact atttctaccc cgatctgccg cagggctatc agatcagcca
     1621 gtacaagtcc ccgatcgtcg gcgagggaac ggtgactgtc gatctcgaga acggcgacag
     1681 tgttaccgtc ggcatcgagc ggctccatct cgagcaggat gcaggcaaga gcctgcacga
     1741 tcgccacccg aattattctt atgtcgacct gaatcggtcg ggggtcgctt tgatggagat
     1801 cgtatcaaag cccgaccttc ggtcggcgga cgaagccaaa gcctacgtcg caaagctgcg
     1861 ctcgatcctg cgctacctcg gcacctgcga cggcgatatg gaaaaaggaa acttgcgtgc
     1921 cgacgtcaac gtctcggtgc gcaagcccgg agatccgctc ggtacgcgct gcgaaatcaa
     1981 gaacgtgaat tcgatacgct tcatcggcca ggcaatcgag catgaagcgc gtcggcagat
     2041 cgagatcatc gaggaaggcg gcacgatcga gcaggaaacg cgcttgttcg atgctgcgcg
     2101 aggtgagacg aggtcgatgc gttcaaagga agaggcgcat gactaccgct attttcccga
     2161 cccggatctg ctgccgctcg aattcgatca cgcgtacgtc gacgagctga agaagcatct
     2221 ccccgaattg cctgatgaaa agaagggccg cttcatgcgg gaattcgcgc tctcgggcta
     2281 cgatgccggg gtgctggtcg ccgagcggga aaccgcggat tacttcgaag ccgtggccaa
     2341 aggccgcgac ggcaagacgg cagcgaactg ggtcatcaac gaattgttcg gccgcttgaa
     2401 caaggaagga caggacattt caacgtcgcc ggtaacggcc gaccagcttg gcacgatgct
     2461 cgatttgatc aaggacggaa cgatttccgg caagattgcg aaggacctgt tcgagatcgt
     2521 ctggaacgag ggtggcgatc cgcgctcgat ggtcgagcag cggggcatga agcaggtcac
     2581 cgatactggc gccattgaaa aggtcgtgga cgacatcgtg ggcaaaaatc cggacaaggt
     2641 cgcggatgca cggtcgaacc cgaaagcaat cggatggttc gtc
//
LOCUS       DATDHO010000941         3581 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_487961, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000941 DATDHO010000000
VERSION     DATDHO010000941.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3581
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_487961"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..665
                     /locus_tag="VIY07_18570"
     CDS             <1..665
                     /locus_tag="VIY07_18570"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6383797.1"
                     /translation="FGRQPKTTRADFIPLARLVADPVLVLVNDQQPYKTLREFVDDAK
                     KRPEAIIYSSGGLYGATHLPVALFENATGIQKLRHLPTNGGGPAITALLGNNAQMSTQ
                     TTTATLQHIRAGKLRPLASFAGTRSKALPDVPTLKELGFNVEYYLWVGIFAPKGTPAN
                     VVSTLNDAINKAANSEPFKTAITNAGLEPAYLDAAGFAKFWTEDAQRSDEAVKLIGRV
                     QG"
     gene            736..1182
                     /locus_tag="VIY07_18575"
     CDS             736..1182
                     /locus_tag="VIY07_18575"
                     /inference="COORDINATES: protein motif:HMM:NF018979.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter TctB
                     family protein"
                     /protein_id="HEY6383798.1"
                     /translation="MILRADHVAGAFFIGFGLLVIALSGDLPAGNLSMPGSGFLPKIA
                     AVLTIFFGILLVLRAGESKPFATLSWADAKHAGLVVGITAAAVALFERLGFLTTNVLL
                     ILTLLVVIERRRLLPAVAYSVGVVVITYVLFVYILKTPLQAGPLGF"
     gene            1190..2722
                     /locus_tag="VIY07_18580"
     CDS             1190..2722
                     /locus_tag="VIY07_18580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter permease"
                     /protein_id="HEY6383799.1"
                     /translation="MESTLLSLAHGFSVALAPANAWYAFLGCLVGTLVGVLPGIGPLA
                     GISILLPVTFGLNATQAIIMLAGIYYGSQYGGSTTSILMRIPGEAASVMTCIDGYAMA
                     KKGRAGAALCIAAVGSWIGGTFGVLVLTVVAPPLATIAVSFGPPEYTALLILGLIFLA
                     YMSSSSLIRTLLMACLGLLLGMIGIDNMTGHFRYSFDLVELGDGIGIVPVAVGLFGLG
                     EILSTPSAGAARDIISPRLRELLPTRREWKEAAMPITRGTVLGFFIGIIPGSAHVISS
                     FLSYAIEKRVSKHPEQFGKGAVAGVAGPETANNAASTGAFVPLLALGIPASPITAVLI
                     GALMIHGVSVGPMLVNEHPDMFWGFVASMYVGNLMLLVLNLPLVSLFVTVLRIPYAYL
                     YPLIIMFCIIGVYKVNNSIVDVWIMLIMGVVGYALRKFDFDPAPLVLGLVIAPILEQS
                     LRQSLIMSNGNYLIFFSRPISLGLMLISVGLLALAAYSFVLHRTDWRTRLARAEAGER
                     ER"
     gene            complement(2749..>3581)
                     /gene="msrP"
                     /locus_tag="VIY07_18585"
     CDS             complement(2749..>3581)
                     /gene="msrP"
                     /locus_tag="VIY07_18585"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016667 - oxidoreductase activity, acting
                     on a sulfur group of donors [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HEY6383800.1"
                     /translation="LSDAANLPDPSADLYPAKRNEKYVLDRAITDEKVNGNYNNFYEF
                     GTSKSIAAAAQALRTRPWTVKIDGMVEKPMEVGIDDLIRKLTLEERTYRHRCVEAWGM
                     AIAWTGFPFAKLVEFARPLGSAQYVRMETFMDPKMAPGQRQPWYPWPYVEGVTMAEAT
                     NELAFLATGAYGHPLARQHGAPLRLALPWKYGFKSIKSIVRFSFTDKRPKGLWEALQP
                     AEYGFWANVNPQVPHPRWSQATEEIIGTGERRPTLLFNGYGDYVAGLYTGMENERLWA
                     "
BASE COUNT          617 a         1101 c         1071 g          792 t
ORIGIN      
        1 tgttcgggcg acaaccgaaa acaacacgtg ccgatttcat tcccttggcg aggcttgttg
       61 ccgatccggt tctcgtgctc gtcaacgacc agcaaccgta caagaccctt agggagttcg
      121 tggacgacgc caagaagcga cccgaggcga tcatctacag ttcgggcggc ctctatggcg
      181 caacccatct ccccgtggcc ctgtttgaaa acgccacagg cattcagaag cttcgccacc
      241 tgcccaccaa tggcggtggg ccggccatca ccgccctgct tggcaacaac gctcagatga
      301 gcacgcagac gaccaccgcg accctgcaac atatcagagc cggcaagctg cgcccgctgg
      361 cctcgtttgc cgggacacga tcgaaggcat tgcccgatgt gccgaccttg aaggagctcg
      421 gcttcaacgt cgaatattat ttgtgggtcg gcatctttgc gccaaaaggc acgcccgcaa
      481 atgtcgtgtc gacgctgaac gacgcgatca acaaagcggc aaattctgaa ccgttcaaga
      541 ctgctatcac caatgccgga ctggagcccg cttatctcga cgccgccggc ttcgcgaagt
      601 tctggaccga agatgcgcag cgctccgacg aggcggtgaa attgatcggc cgcgttcagg
      661 ggtgatggga tcgcctatcg ccgagttttc gctgcagggg cgctcgaggt tttcgccagc
      721 tgtcgaggat cgcttatgat tctgcgcgcc gaccatgtcg caggcgcttt cttcattggc
      781 ttcggcttgc tggtgattgc gctcagcggc gatcttccgg ccggaaattt gtcgatgccg
      841 ggttccggtt tcttgccgaa gattgctgcc gttctgacga tattcttcgg gatcttgctg
      901 gtcctgcgcg cgggagagag caagcctttt gcgaccctgt catgggccga cgccaagcat
      961 gccggactgg ttgtgggcat aacggcggca gcggttgcgc tgttcgaacg gctcggtttt
     1021 ctgacgacca atgttctgct gattctcacg ttgcttgtgg tcatcgagcg gcgccggctg
     1081 ttgccggccg tcgcttacag cgttggcgtc gtcgtgatca cctacgtctt gttcgtttac
     1141 atcctgaaga cgccgttgca ggccgggcca ctcggattct aggaccaccg tggaaagcac
     1201 ccttctcagc ctcgctcacg gcttttccgt cgcactcgcg ccggccaatg cctggtatgc
     1261 gtttctcggc tgcctcgtcg gcacgctggt cggcgtgctg ccaggcatcg gccccctggc
     1321 cggcatttct attttgctgc cggtgacttt cggcctgaac gccacgcagg cgatcatcat
     1381 gctcgccggc atttattacg gctcgcaata cgggggctcg accacctcga tcctgatgcg
     1441 aatccccggc gaagctgcgt cggtgatgac ctgcatcgac ggctacgcga tggcgaagaa
     1501 aggccgcgca ggcgcggcgc tctgcatcgc ggcagtcggc tcctggattg gcggcacgtt
     1561 tggcgtgctg gtgctcactg tcgtggcgcc gccactggcg accattgccg tcagcttcgg
     1621 gccgccggaa tacactgcac tgcttatcct cggcctgatc ttcctcgcct acatgtcttc
     1681 gtcctcgctg ataaggacac tgctgatggc ttgcctcggg ctgctgctcg gcatgatcgg
     1741 catcgacaat atgacggggc atttccgcta cagcttcgac cttgtcgaac tgggcgacgg
     1801 tatcggcatc gtcccggtgg ccgtcggatt gttcgggctc ggtgagattc tgtcgacgcc
     1861 cagtgccgga gccgcaagag acatcatcag tccccgattg cgcgaactgt tgccgacccg
     1921 ccgggaatgg aaagaggctg ccatgccgat cacgcgcggg acggtgcttg gatttttcat
     1981 cggcatcatt ccgggctcag cgcacgtcat ctccagtttt ctctcctatg cgatcgagaa
     2041 acgggtgtcg aaacaccccg aacagttcgg caagggggcc gtcgcgggtg tcgccgggcc
     2101 ggaaacggcc aacaatgcgg cctcgaccgg tgctttcgtg ccgttgcttg ctctcggaat
     2161 cccagcaagt ccgatcaccg cggtgctgat cggcgcgctg atgattcacg gtgtctctgt
     2221 gggaccgatg ctggtcaatg agcacccgga catgttctgg ggatttgtcg cctctatgta
     2281 tgtcggcaac ctcatgctgc tggtgctcaa ccttccgttg gtcagcttgt tcgtcaccgt
     2341 tctgcggatt ccgtacgcct atctgtatcc gctcatcatc atgttctgca ttatcggcgt
     2401 gtacaaggtg aacaactcga ttgtcgatgt gtggatcatg ctgatcatgg gtgtcgtcgg
     2461 atacgcgctg cgcaagttcg actttgaccc ggctccgttg gtgctcggcc tcgtgatcgc
     2521 gccgatcctg gagcaaagcc tgcgccagtc gctgatcatg tcgaacggca actacctgat
     2581 ctttttcagc cggcccattt cgctcggcct gatgctgatc agtgtcggcc tgctcgccct
     2641 cgccgcctat tccttcgtgc ttcaccgcac cgactggcgt accagactgg ccagggcgga
     2701 agccggcgaa cgggagcgat aggaactgat cccgaaatcg tcagcggatc acgcccagag
     2761 gcgctcgttc tccatccctg tgtagagccc ggcgacatag tcgccatagc cgttaaacag
     2821 gagggtcggc cggcgctcgc cggtcccgat gatctcttcg gtcgcctggc tccagcgtgg
     2881 atgcggcact tgcgggttga cgttcgccca gaaaccatac tcggcgggtt gcaaggcttc
     2941 ccacaggcct tttgggcgct tgtcagtgaa gctgaagcgc acgatcgact tgattgactt
     3001 gaagccgtat ttccacggca gcgccaaacg cagcggcgcg ccgtgctgcc gggcgagcgg
     3061 atgtccgtag gcgccggtgg cgagaaaggc gagctcattg gtcgcttccg ccatcgtgac
     3121 accttcgaca taaggccacg gataccatgg ctgccgttgg cccggcgcca tcttcggatc
     3181 catgaacgtt tccatgcgca cgtattgggc ggaaccaagc gggcgcgcga actcgaccaa
     3241 cttggcaaac gggaaacccg tccacgcgat cgccatgccc caggcctcaa cgcagcggtg
     3301 gcggtatgta cgctcctcca gcgtcaactt gcggatcaga tcgtcgatgc cgacttccat
     3361 cggcttttcc accatgccgt caatcttcac agtccatggc cgggtgcgga gcgcctgggc
     3421 agccgcggcg atcgatttcg aagttccgaa ctcatagaag ttattgtagt tgccgttgac
     3481 tttctcgtcg gtaatcgccc ggtcgagaac gtatttctcg ttgcgcttgg cgggataaag
     3541 gtcggcgctc ggatcgggca gattggcagc atcggaaaga c
//
LOCUS       DATDHO010000942         2194 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_196727, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000942 DATDHO010000000
VERSION     DATDHO010000942.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196727"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(243..968)
                     /locus_tag="VIY07_18590"
     CDS             complement(243..968)
                     /locus_tag="VIY07_18590"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HEY6383801.1"
                     /translation="MAVNPAATSAAPQITGAIRQAAQSTGISFEYLLTTAKIESNFNP
                     SAQASTSSAKGLYQFIDQTWLGTMKQDGAALGLGRYADAITRTSNGRYAVSDPRMRTA
                     ILQLRSDPKASAMLAGALTRNNAALVSSSIGRQPTNGELYIAHFLGADGAGKLINGAS
                     KHPHRSAAAMFPHAAAANHTIFYDSAGRARSVGEVCGKLTRLFDSARDVTFAQRGAPG
                     KEGAAQSTGAPPLPPPVTVRSQP"
     gene            1118..1600
                     /locus_tag="VIY07_18595"
     CDS             1118..1600
                     /locus_tag="VIY07_18595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HEY6383802.1"
                     /translation="MVETIQRHKRGGLYFEDFEVGKTYEHRYTRTVTQMDNMLFSNMT
                     LNPQPLHIDRHFCETETEWGQPLMNSLFTLGLMIGIQVSDMTVGTTIANLGMTDVKFP
                     NPLFEGDTINCTTQVVSKRESKSRPGAGIVEFHHKAFKQDGTLVAECHRQAFMRMRPK
                     "
     gene            complement(1659..>2194)
                     /locus_tag="VIY07_18600"
     CDS             complement(1659..>2194)
                     /locus_tag="VIY07_18600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEY6383803.1"
                     /translation="RRAKERLSQLKPTDVVVPDQVVDGKRTIKLGGTTLDLVYTGRNH
                     SDSSIVMLLPKEKILFAVDFNSLGAVPSRLAVNDSYPTEWEASLKKTLALGWERMIPG
                     HPGPNGRLGTRKDMEEQMAFMTDLASEVKKASDAGKCFDPATKEVRVPKYQTLTNYEQ
                     NIEWNVHRWCGYYGRGI"
BASE COUNT          436 a          627 c          694 g          437 t
ORIGIN      
        1 accaagacct atttcggacc ggatcggcga cgcaatgtca attcgaacta tatcggtccg
       61 gagcgcccgg tctgtaaaca tggactcgaa agatggccga gcagctggcg gcggcggcaa
      121 cgtctcgctg gcacgggcga aagcctgtgt cactccggcg gtgtcaggcg ttgggatcgg
      181 tgcaggaggc acgggcgcag ctgcagatgc aacccggaca gcacgctcgg cggagacccc
      241 tttcacggtt gcgacctgac ggttacggga ggcggcaaag gtggggcacc cgtggattgc
      301 gcggcccctt ccttgccggg cgcgccgcgc tgcgcgaacg taacatcgcg agctgaatcg
      361 aatagccgcg tcagctttcc gcatacctcg ccaacgctgc gagcgcggcc ggcggagtca
      421 tagaaaatcg tgtggttggc agcggcagca tgcggaaaca tggccgccgc actcctgtgc
      481 ggatgttttg atgcgccgtt gatgagcttt ccggcgccgt ctgcgccgag aaaatgcgca
      541 atgtagagct ctccattggt cggctgacgg ccgatgctcg agctcaccaa tgccgcgttg
      601 ttgcgagtca gcgctccagc cagcatcgcg ctggctttcg gatcgctgcg aagctgcagg
      661 attgcagtcc gcattcgagg atccgaaacg gcgtagcgcc cattcgatgt gcgggtaatg
      721 gcatcggcgt agcggccgag tcccagcgcc gcaccatcct gtttcatggt gccgagccag
      781 gtttgatcga tgaactggta gaggcccttt gccgacgagg tcgatgcctg cgccgatgga
      841 ttgaagttgg attcgatttt cgccgtggtc agcagatatt cgaagctgat gcccgtcgac
      901 tgggctgcct ggcggatcgc tccggtgatc tgtggcgccg cgctggtggc agccggattg
      961 acggccatgg tgttgcgcct ttgcgaagct ctcggctcat ggtcggtgac gcggacgcaa
     1021 cggttgtcgc gggcctgccg agcatgggga attatggtaa acgaatggta aatggcgttc
     1081 gcaaacgcgc actcgacaag gaattcggag ggcttcgatg gtggaaacga tccagcggca
     1141 caagcgtggc ggactctatt tcgaggattt tgaagtcggc aagacttacg agcaccgcta
     1201 cacgcgcacg gtgacgcaga tggacaacat gttgttctcc aacatgacgc tcaatccgca
     1261 gccgctgcat atcgaccgcc atttctgcga gaccgaaacc gaatggggcc agcccttgat
     1321 gaactccctg ttcacgctcg ggctcatgat tggaatccag gtgtcggaca tgacagtcgg
     1381 cacgaccatt gccaatctcg gcatgaccga cgtgaaattc cccaatccgc tctttgaagg
     1441 cgacaccatc aattgcacga cccaggtcgt gagcaagcgc gaatccaagt ctcgcccggg
     1501 cgcaggcatc gtcgaatttc accacaaggc cttcaagcag gacgggacgc tcgtggccga
     1561 atgtcaccgg caggcattca tgcggatgcg gccgaaataa aataaaaggg gcccggcggt
     1621 tggcgccggg ccttgatgtt cttaatcagc ccaaacctct agatgccgcg accgtagtag
     1681 ccgcaccagc ggtgaacatt ccactcgatg ttctgctcgt agttggtcaa ggtctgatat
     1741 ttaggcacgc gtacttcctt ggttgccggg tcgaagcact tgccggcgtc ggacgccttc
     1801 ttaacctcgg aggcaagatc cgtcatgaag gccatctgct cttccatgtc cttgcgggta
     1861 ccaaggcggc cgttgggccc aggatgtccg ggaatcatgc gctcccatcc gagggcaagc
     1921 gtctttttca acgaggcctc ccattcggtg ggataggaat cgttcaccgc gagccgcgac
     1981 ggcacggcgc cgagtgaatt gaagtcgacg gcaaacagaa tcttctcctt tggcaacaac
     2041 atcacgatcg atgagtcgga gtggttgcgg ccggtgtaga ccaggtcaag agtggtgccg
     2101 ccgagcttaa tcgtgcgctt gccgtcgacg acctgatcgg gaacgacaac gtcggtgggc
     2161 ttgagttgcg aaagccgttc cttggcgcgg cgat
//
LOCUS       DATDHO010000943         1503 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_196750, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000943 DATDHO010000000
VERSION     DATDHO010000943.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_196750"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(82..987)
                     /locus_tag="VIY07_18605"
     CDS             complement(82..987)
                     /locus_tag="VIY07_18605"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383804.1"
                     /translation="MDDYLIGVLSNIGVMSFIALSAYVLLLTGEISFGQQAFFAIGAY
                     AAGVATALWEWPLAIAIPWGAAIGAAAAALVGVPTLRLRGLYFAIATLAFAEMVRILF
                     ELFRYQILVDGEWAGPNGTDGFRNIRYIFENDIDAFQFMLLIYVLLVATLVGFMLLER
                     SRLGVIFRMIGEDETLAALQGVSVARHKVLAAGIAGALAGLGGGLYAHLTTYVEPRNF
                     DVMLGVHSLAYGLIGGLGTAFGPLLGVLIDIGLLEAIRAVAGYRMIIFGGLVALLLIV
                     RPRGLLDETVVHRISQAWRLISART"
     gene            complement(991..>1503)
                     /locus_tag="VIY07_18610"
     CDS             complement(991..>1503)
                     /locus_tag="VIY07_18610"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383805.1"
                     /translation="LLEWGPFLLRPDHLIVFGSAVGLTAGIQIALYRTRFGRALRAII
                     DNPVAAHLVGINVRTAVMFAFAAASAIGGVAGFLVLAVDQQVTPMFGMWATLKGLIAM
                     MIGGLGSIPGALFGGLLLGVVETHSQWYFGPQIRDLTAYVVLFAFLLMRPSGLLGLPP
                     GPDTASPQKR"
BASE COUNT          382 a          470 c          421 g          230 t
ORIGIN      
        1 gattattgcg aacagtgatg gtctgcgcac gtcttcttcc tccggcaggc ttcgccgtca
       61 gtgagtcttg attttcgaac gtcacgtgcg cgccgagatt aggcgccacg cctgactgat
      121 cctgtgcacg accgtctcat cgagcaggcc gcgcggccgc acgatcagca agagcgcaac
      181 aaggcctccg aagatgatca tgcgatatcc ggcgacagcc ctgatggctt ccaagaggcc
      241 aatatcaatc agaacgccaa gcaacgggcc gaacgctgtg ccgagcccgc cgatcaggcc
      301 ataggccaag ctatgaacgc cgagcatcac atcaaaatta cgcggctcaa cataggttgt
      361 aagatgtgcg tagaggcctc cgcccaagcc agccaaagca ccggcaattc ctgccgcaag
      421 caccttatga cgcgcgacgg agacgccctg cagtgcggcg agcgtctcgt cctcaccgat
      481 catgcggaag atcacgccga gacgggatcg ttcgagcagc atgaacccaa caagcgtggc
      541 cacgagcaga acgtagatca aaagcatgaa ttggaaggcg tcgatgtcgt tttcgaatat
      601 gtagcggata ttgcgaaagc catcggtgcc gttgggcccc gcccattcgc catcgactag
      661 aatctggtag cggaagagtt cgaacaggat ccgtaccatc tcggcgaaag ccagtgtcgc
      721 aatggcgaag taaaggccgc gcagccgcag cgtcggcaca ccgacgagcg cggcggcggc
      781 tgcgccgatc gcagcgcccc acggaatcgc tatggccagc ggccactccc acagagccgt
      841 cgcaacacct gcggcatagg cgccgatagc gaagaaggcc tgttgtccga aggagatctc
      901 gcccgtcaac aataagacat aagccgacag cgcaataaac gacatcacgc cgatgttcga
      961 caggacgccg atgagataat catccatggt tcatcgtttc tgcggcgagg cggtgtcggg
     1021 ccccggcggg aggccaagca aaccgctggg acgcattagg agaaaggcga atagcaccac
     1081 ataagcggta agatcgcgaa tctgcggacc gaaataccat tggctatgcg tctccacgac
     1141 gccaagcagc aaaccgccga agagcgcacc aggtatcgat ccgagcccgc cgatcatcat
     1201 tgcgatcagg cccttcaacg tcgcccacat gccaaacatc ggcgtcacct gctgatcgac
     1261 cgcgagcaca agaaaaccgg ccacgccgcc gatcgccgac gcagcagcaa aagcaaacat
     1321 cacggcagtc ctaacattga tgccaaccaa atgcgcggca accggattgt cgataatcgc
     1381 ccgcaaagcc cggccgaagc gggtcctata aagcgcaatt tgaatccccg cggtcagtcc
     1441 aaccgcgctg ccgaacacga tcagatgatc gggccgcagc agaaacggcc cccattcaag
     1501 tag
//
LOCUS       DATDHO010000944         2756 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_92966, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000944 DATDHO010000000
VERSION     DATDHO010000944.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2756)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2756)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2756
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_92966"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..228
                     /locus_tag="VIY07_18615"
     CDS             <1..228
                     /locus_tag="VIY07_18615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006339457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HEY6383806.1"
                     /translation="AARVTREAAMAKLFATEAAQRVIDAAVQIHGGDGVRSGHPVETL
                     YREIRALRIYEGASDVQKVVIARSALSSVEH"
     gene            230..1885
                     /locus_tag="VIY07_18620"
     CDS             230..1885
                     /locus_tag="VIY07_18620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6383807.1"
                     /translation="MAPAKARPKLGRSAHVDTFTRDNLPPFDQWPDLLLDRPEFQYPD
                     RLNAAVELTDRLVEQGFGDRVALIGNGRRRTYKELTDWSNRVAHALVENYGVKPGNRI
                     LIRSGNNPALVAAWLAATKAGAVVVNTMPMLRAGELAKIVDKAQISLALTDTRIADEL
                     IACAKDSRFLNQVVGFDGTSNHDAELDRIALDKPVKFDAVQTGRDDVALLGFTSGTTG
                     EPKATMHFHRDLLIIADGYAREVLKVTPEDVFVGSPPLAFTFGLGGLAIFPLRFGATA
                     TLLENASPANMIQIVETYKATICFTAPTAYRAMLGAMEQGADLSSLRIAVSAGETLPP
                     PVFEDWRRKTGKPILDGIGTTEMLHIFISNRLDDALPGITGRPVAGYEAKVVDKDMNA
                     VKPGTVGRLAVRGPTGCRYLADQRQTSYVSDGWNLTGDAYIQDEEGRFHFAARADDMI
                     VSAGYNIAGPEVEAALLSHADVGECAVIGAPDVERGQIVTAYVVLKAGIDRDADCVKR
                     LQDHVKAVIAPYKYPRAVKFVDALPKTQTGKIQRFKLRQQSQP"
     gene            1882..2292
                     /locus_tag="VIY07_18625"
     CDS             1882..2292
                     /locus_tag="VIY07_18625"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEY6383808.1"
                     /translation="MSKNTFEFLQPKNWLPPKGYSNGVAAEGRQVFVAGQIGWSERGE
                     LVSDDFVAQAERALANIVQVLAEAGGEPRHLTRLTWFVTDKSAYVARQKEIGEAYRRV
                     IGRHFPAMSLIVVAGLLEPGAKVEIEATAVIPPD"
     gene            2436..>2756
                     /locus_tag="VIY07_18630"
     CDS             2436..>2756
                     /locus_tag="VIY07_18630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383809.1"
                     /translation="MKTSRRTLLKNSAAAAAALSLDWRYASAQAETVRIGVIFDHSGP
                     FAAGGSVACAVGTQIAIDLCNERGGVGGKYKVVPVNADSQSKADVAINEVERLISQEK
                     IDIVN"
BASE COUNT          556 a          837 c          849 g          514 t
ORIGIN      
        1 gccgcgcgtg tcacccgcga ggctgccatg gccaagctgt tcgcgaccga agccgcacag
       61 cgcgtgattg acgcggccgt gcagatccac ggcggcgatg gcgtgcgatc gggccacccg
      121 gtcgaaaccc tctaccgcga gatcagggcc ctgcgcattt acgaaggggc ctccgacgtc
      181 cagaaagtcg tgatcgcgcg atccgccctc tctagcgtgg agcactgaca tggcgccggc
      241 aaaagcccgt ccgaagcttg gtcgctccgc gcatgtcgac acgtttacgc gcgataatct
      301 gccgccgttc gaccaatggc ccgatttgct gctcgatcgg cccgaattcc agtatcccga
      361 ccgtcttaat gcagcggttg aactgactga tcgtttggtt gaacaaggtt ttggcgatcg
      421 cgttgccttg atcggaaacg gccgccggcg aacctacaaa gagctgacag attggtcgaa
      481 ccgggtcgct catgcgctcg ttgagaatta tggcgtaaag ccaggcaatc gcattctgat
      541 ccgctcaggc aacaatcccg ctcttgtcgc cgcgtggctg gcggcgacca aggccggtgc
      601 cgtcgtcgtc aatacaatgc cgatgttgcg ggccggcgag ctcgccaaga tcgtcgataa
      661 ggcccagatc agtctcgctc tgaccgacac gcgcatcgcc gacgagttga tcgcctgcgc
      721 caaggacagc cgtttcctca accaggttgt tggcttcgac ggaacgtcga accacgatgc
      781 ggagctcgat cgcatcgccc tcgacaagcc ggtgaagttt gacgcggtgc agaccgggcg
      841 ggacgacgtg gcactgctcg gctttacgtc gggcactacg ggcgagccga aggcgacgat
      901 gcatttccat cgcgacctgc tgatcattgc cgatggctat gcgcgtgagg ttcttaaagt
      961 aacgcctgag gatgtctttg tcggctctcc gccgctcgcc ttcaccttcg gcctgggtgg
     1021 gctggcgatt tttcccttgc gattcggagc aactgcaacc ctgcttgaaa acgcatcgcc
     1081 cgccaacatg atccagatcg tcgagaccta taaggcgacg atctgcttca ccgcgccgac
     1141 tgcctatcgg gcgatgctgg gggcgatgga gcagggcgcc gatctgtcct cgttgcgcat
     1201 cgccgtctcg gcaggcgaga cattgccgcc gccagtcttc gaagattggc ggcgcaagac
     1261 aggcaaaccg atactcgacg ggatcggcac caccgaaatg ctgcacattt tcatttccaa
     1321 ccgcctcgat gacgccctgc cgggcatcac agggcgcccg gttgcgggct acgaagcgaa
     1381 ggtcgtggat aaggacatga atgccgtcaa gccgggaacc gtcggccggc tcgcggtgcg
     1441 cggcccgacc ggctgccgct atctcgccga ccaacggcaa acatcgtacg tctccgatgg
     1501 ctggaatttg accggagacg cttacattca ggacgaagaa ggccgcttcc atttcgcggc
     1561 gcgagccgac gatatgatcg tgtcggccgg ttacaacatt gccggaccgg aagtcgaggc
     1621 ggcgcttctg tcgcatgcgg atgtggggga gtgcgcggtc atcggcgcgc ccgacgtcga
     1681 gcgtggccag atcgtaaccg cctatgtcgt tctcaaggcg ggcattgatc gcgacgcgga
     1741 ctgcgtaaaa agactgcaag atcatgtgaa ggccgtcatc gcgccctaca aatatccgcg
     1801 cgcggtgaag ttcgtcgatg cgttgccgaa gacccagacc ggaaaaatcc agagattcaa
     1861 attgcgacag caaagtcagc catgagcaag aatacattcg aattccttca gccaaagaac
     1921 tggttgccgc ccaaaggcta ttccaacggc gtcgccgccg aggggcgcca ggtcttcgtc
     1981 gcgggccaga tcggctggag cgagcgcggc gaactcgtca gtgacgactt tgtcgcccag
     2041 gccgaacgcg cgcttgcgaa tatcgtgcag gtgctggccg aggcgggggg agagcctcgt
     2101 catctgacgc gactgacctg gttcgtgacc gacaagtcag cgtatgtggc tcggcaaaag
     2161 gaaatcggcg aagcctatcg ccgggtcatc ggccgtcatt ttccggcaat gagcctgatc
     2221 gttgtcgcgg gactgttgga gccgggcgcc aaggttgaaa tcgaggctac ggccgtcatt
     2281 ccgcccgact gaaattcggc aaatcaaatc atgattacct gccggcacgc agaaagacgt
     2341 ttgccggacg gttccgtcgt tgacattcgg ggccgttctc aaaatactcg cctgaacaac
     2401 aggcaaaatg gccgccgtat ccagggagga atgcaatgaa gacctcgcgc aggacgcttc
     2461 tgaaaaattc cgccgctgcc gctgctgccc tcagtctcga ctggcggtac gcttccgcgc
     2521 aggctgaaac cgtccgtatc ggcgtcattt tcgatcactc tggaccattc gcagccggcg
     2581 gctcggtcgc ctgcgcagtc ggcacgcaga tcgcgatcga tctgtgtaac gagcgcggcg
     2641 gcgtcggcgg caagtacaag gtcgtgccgg tcaacgcgga ctcgcagagc aaagccgatg
     2701 tcgcgatcaa cgaggtcgag cgcctgatca gccaggaaaa gatcgacatc gtcaac
//
LOCUS       DATDHO010000945         2746 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_295614, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000945 DATDHO010000000
VERSION     DATDHO010000945.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_295614"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(98..979)
                     /locus_tag="VIY07_18635"
     CDS             complement(98..979)
                     /locus_tag="VIY07_18635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEY6383810.1"
                     /translation="MRKPAAAATAPADSGRRTGIARTLPVIVLAASLGACSSFDFFAK
                     KDDTAPDAPADRLYNEGLYLLNAKKDPKQAVKKFEEVDRQHPYSEWARKSLIMTSYAY
                     YQAGEYDDCVNAAKRYITLHPGGADAAYAQYLIGSSYFDEIPDITRDQARTEKALGAL
                     DEVVRKYPGSEYAVSAKQKIEVARDQLAGKEMEIGRYYMKKKDYTGAINRFKVVVTKF
                     QTTRHVEEALMRLTESYMALGIVDEAQTAAAVLGHNFPDSSWYKHAYALVKTSGVEPK
                     ENQGSWISKAFKRIGLG"
     gene            complement(1168..2124)
                     /gene="lpxC"
                     /locus_tag="VIY07_18640"
     CDS             complement(1168..2124)
                     /gene="lpxC"
                     /locus_tag="VIY07_18640"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEY6383811.1"
                     /translation="MKGAKQTTLRHQVAVSGIGVHSGLPVTLTLHPADDDSGIIFQRI
                     ARNGSIEREIRADVRAVTATEFATVLGDSRGPLCSTAEHLLAALRGLYVDNVVIEIDG
                     PEVPIMDGSAAGFVDAIDQAGLTARALPRRYIEVLKPITVAKDGAYGELRPYQHGFRV
                     EAEIDFDHPLIGQQALSLDIEPETFRREIARARTFGFMRDVAKLWSAGYALGASFENT
                     LVISGDRVLNPEGLRFADEFVRHKILDAIGDLALAGQPLLAAYKTIRGGHRLNHAVLS
                     ALMADPKAWRVVEAASEPARRTRGHAHVVTGLVAPAYRPEVA"
     gene            complement(2522..>2746)
                     /locus_tag="VIY07_18645"
     CDS             complement(2522..>2746)
                     /locus_tag="VIY07_18645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEY6383812.1"
                     /translation="PPMPRAARPMPQYERPAQRPTARQPEGRPAEPVSEYARRTAPQG
                     LEAHGRTAPVHNSAEEDQLDIPAFLRRQAN"
BASE COUNT          523 a          835 c          833 g          555 t
ORIGIN      
        1 gggccgggca tgcactcctg cgattccgca taatcaaaga cgacggtggc cgggacaagc
       61 ccggccaaga cgatgtgggt aaatctcgag cgagcggcta acccaagccg atgcgtttga
      121 aggccttgct gatccaggaa ccctgatttt ccttcggctc gacgccgctg gtcttcacca
      181 gcgcgtaagc gtgtttgtac caggagctgt cggggaaatt atgcccaagg accgcggccg
      241 ccgtctgggc ctcgtccact atgccgagtg ccatgtagga ttcggtcaac cgcatcagcg
      301 cttcctcgac gtgacgcgtc gtctggaatt tggtgacgac cactttgaag cggttgatgg
      361 cgccggtgta atccttcttc ttcatgtaat agcggccgat ctccatttcc ttgccggcca
      421 attgatcgcg ggcgacttct attttttgct tggcgctgac ggcatattcg ctgcccggat
      481 atttgcggac gacttcgtca agtgcgccaa gtgctttttc ggtgcgcgcc tgatcgcggg
      541 taatgtctgg aatttcatcg aaatacgacg agccgatcag atactgcgca tacgcagcat
      601 cggccccacc gggatgcagc gtaatatagc gtttcgccgc attgacacag tcgtcgtact
      661 cgcccgcctg atagtacgca tacgacgtca tgatcaggga cttgcgtgcc cactcggagt
      721 acgggtgctg gcggtcgacc tcttcgaact tcttgaccgc ctgctttgga tccttcttgg
      781 cattcagaag gtagagcccc tcgttgtaaa gccggtcggc cggcgcatcg ggggccgtgt
      841 catctttttt ggcgaaaaaa tcgaagctac tgcacgcacc cagactggca gcgagcacga
      901 tgaccggcag cgtgcgagca atacccgtcc ggcgtcccga atctgccggc gcagtcgcgg
      961 ctgcggcagg cttgcgcatc gtcctgacca ttagaatcct ggacacaaac tcattcacgc
     1021 gacgttcgct tcccccaaag cttagcaacg atctgtcccg gcacaggcaa tgcgcgccgg
     1081 tttatccgaa aatggccaat ttcgccatgc gactaagccg acaatcggcc cggattaagg
     1141 cgacagttta ggcgaaattg cgagggttca ggccacttcg ggcctgtaag ccggcgctac
     1201 caggccggta acgacatggg cgtggccacg cgtgcgccgc gcaggttccg aggccgcctc
     1261 gacgacccgc caagcctttg gatcggccat caaggcggac agaacggcat ggttcagcct
     1321 gtgcccaccg cgaatggtct tgtaagcggc aaggagcggt tgaccggcga gcgccagatc
     1381 gccgatggca tcgaggatct tgtggcggac gaactcgtct gcaaaccgca agccctcggg
     1441 attgagcacc cggtccccac tgatgactag ggtattctca aacgaggcac caagggcgta
     1501 gccggcactc cagagcttgg ccacgtcgcg cataaagccg aacgtgcggg cacgcgcgat
     1561 ttcccggcgg aatgtttcgg gctcgatgtc cagcgaaagc gcctgttggc caatcagggg
     1621 gtgatcgaag tcgatctcgg cttcgacccg gaagccgtgc tggtaaggcc gcaattcgcc
     1681 ataggcgccg tccttggcca cggtaatcgg cttgagcact tcgatgtagc ggcgcggcag
     1741 cgcgcgtgcg gtaaggccgg cctggtcgat ggcatcgaca aacccggcag cactgccatc
     1801 catgatgggg acttcgggtc cgtcgatctc gataacgacg ttatcgacat aaaggcctcg
     1861 caatgccgcc agcaggtgct cggcggtcga gcatagcgga cctctggaat cgccaagaac
     1921 ggttgcgaac tctgtcgccg tgaccgcgcg aacgtcggcg cgaatctcgc gctcgataga
     1981 gccgttacgt gcaatgcgtt ggaaaatgat tccgctatcg tcgtcggcag gatgcagcgt
     2041 aagcgtaacg ggaagcccag aatggacgcc gatgcccgaa acggcgacct ggtggcgtag
     2101 cgttgtttgc tttgcgccct tcatctaccc cgacttccgc ccggccgttt gagtgccgtg
     2161 cggccccgtc cccgcggccc ctggtgggcc acatttctgc cgttagtccc aagccgcccg
     2221 atagcccggg cggaaatccc cattagcgcg aatgtccctt tcgcacctga aacttaggcc
     2281 cgactcagag cttctccaac tcacgctttc ttaccaactg ttactgcttt tttgccgcaa
     2341 ttcccgcggc catggcggtt gatcaccaca attgcgcccc gggggatcgc ggctggagac
     2401 tttgtctagc cagacgggcc ggtttacgac ttaaaaatac aagtgttttc agcgcattac
     2461 aaagaaacaa aacgaccccg ctcctcggca ggggagcggg gctggtgtcg taagacgccc
     2521 gtcaatttgc ctggcgtcgg aggaaagccg ggatgtcgag ttgatcctcc tcagccgaat
     2581 tatgcacagg tgccgtgcgg ccgtgggcct ccagaccctg tggggccgtc ctccgggcat
     2641 attcggagac cggctcggcc ggccggcctt ccggctgccg tgccgtagga cgttgcgctg
     2701 gacgctcata ttgcggcatg ggccgcgcgg cccggggcat gggagg
//
LOCUS       DATDHO010000946         1617 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_243899, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000946 DATDHO010000000
VERSION     DATDHO010000946.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_243899"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..590)
                     /locus_tag="VIY07_18650"
     CDS             complement(<1..590)
                     /locus_tag="VIY07_18650"
                     /inference="COORDINATES: protein motif:HMM:NF014671.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEY6383813.1"
                     /translation="MADSPITLGIFAKAVGTRLSKEDDRIAVEEPLELRLGRTPVAVT
                     MRTPGEDRELAAGFLLTEGIIRRLADIEKMVGPARSLPNVVTIKLRRGLRFRHDRLMR
                     HFYATSSCGLCGKTTLESIRVRTQPVSDDLKVSLKLLYSLPERLREAQDTFEATGGLH
                     AAALFDAEGALLHLREDVGRHNAVDKAIGAALVRNQL"
     gene            complement(630..>1617)
                     /locus_tag="VIY07_18655"
     CDS             complement(630..>1617)
                     /locus_tag="VIY07_18655"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HEY6383814.1"
                     /translation="AESETTMRRNRLGFDTLALRPRVLVDVSKIDTSTTFLGQKLRIP
                     VMMAPIGSLQTITPEGGVAVAKAAAEFGTMNFVSSVTQPSLEEIAASTNHPKIFQLYV
                     RGGLDWCEEILGRVKKAGYSALCLTVDTAHYSRRERPLLNRWQPPSRRSETGRHFQSM
                     LTWETMKAIKKIAGLPFILKGVATAEDAKLAVEHGVDVIYVSNHGGRQLDHGRGTIDT
                     LPEIAEAAAGKVDIILDGGVTRGTDVLKALALGCKAVTIGKLQGWGLGAGGQAGLLRV
                     LELLEEEITIDMALLGVTRIDQIKPYHVCKAPAVTSPHEMSAFCHIPGGQLR"
BASE COUNT          318 a          509 c          457 g          333 t
ORIGIN      
        1 agctggttgc gcacgagagc ggcgccgatc gccttatcga cggcattgtg ccggccgaca
       61 tcttcccgca agtgtagcag tgcgccctcg gcgtcgaaca acgccgcggc atgcaacccg
      121 ccggtcgcct cgaacgtatc ctgggcttcg cgcaagcgtt ccggcaaaga gtaaagcagt
      181 ttcaaagata ctttgaggtc atccgaaacg ggctgcgttc tgacgcgaat cgattcgagg
      241 gtcgttttgc cgcaaagtcc gcagctcgat gtcgcataga agtggcgcat caagcgatcg
      301 tgtctaaaac gcagcccgcg acgcagcttg atagtaacga cattgggcaa gctgcgcgcg
      361 ggcccaacca tcttttctat gtcggcaagc cgccgtatga ttccctccgt cagcaaaaaa
      421 cccgccgcca attcgcggtc ttcgccgggc gtccgcatcg tgacagccac aggagttcgg
      481 cctaggcgca actccaacgg ctcttccacc gcgatgcgat cgtcctcctt gctcaggcgt
      541 gtcccgacgg cctttgcaaa tatcccaagg gtgatcggtg aatcggccat ccgaattcgc
      601 aggcgcggaa gaaaatcctg cgccggtaat cagcgcaatt ggccgccggg tatatggcaa
      661 aaggcgctca tttcgtgcgg cgaagttacc gcgggggctt tgcagacatg atagggtttg
      721 atctgatcga tgcgagttac gccgaggagc gccatatcga tggtgatctc ctcctcaagt
      781 agctccagga cgcgcagcaa gccggcctgc ccccccgcgc ccaagcccca gccttggagt
      841 ttaccaatgg tcactgcctt gcacccgagc gccagcgcct tcaagacgtc ggtgccacgg
      901 gtaacgccgc catctaatat gatgtccacc ttgccagccg ccgcttcggc gatttccggc
      961 agggtgtcaa tggtacctct gccgtgatcc aactgccttc cgccgtgatt cgagacgtag
     1021 atcacgtcca ctccatgctc cacggccaat ttggcatctt cggccgtcgc cactcccttc
     1081 aaaataaacg gcaggccggc gatttttttg atcgccttca tagtttccca ggtcaacatc
     1141 gattgaaagt gccggcccgt ctcggaccgt ctgctgggtg gctgccaacg gttgagcagc
     1201 ggcctttctc gccggctgta atgggcggta tcgacggtca ggcagagggc gctatacccg
     1261 gcctttttca cccgcccgag gatttcttca caccaatcca aaccgccgcg cacgtagagc
     1321 tgaaagatct ttggatggtt cgtgctcgcg gcgatctctt ccaggctcgg ctgggtgacg
     1381 gagctaacga agttcatcgt gccgaactcg gccgcggcct tcgccacagc gactccgccc
     1441 tcgggagtga tcgtttgcag tgaaccgata ggcgccatca taaccgggat gcgcagcttt
     1501 tgccccaaga aagtcgtcga agtgtcgatc tttgaaacgt ccaccagcac ccgcggccgt
     1561 aaagctagag tgtcgaagcc gaggcggttc cgcctcatag tcgtttcaga ctcggcg
//
LOCUS       DATDHO010000947         2100 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_443862, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000947 DATDHO010000000
VERSION     DATDHO010000947.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_443862"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(316..876)
                     /locus_tag="VIY07_18660"
     CDS             complement(316..876)
                     /locus_tag="VIY07_18660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383815.1"
                     /translation="MFGKKAFMDDLGRNLNHARQRRDALVSKRDALASDVTALDAQIA
                     EFEARLTEEKDRRERERVVGEIEGIKKRLKDAATAFAPSIVGLCNATEAAGAVVPEAR
                     ELNSFLLSVATEVDIVIDSLLCELQRQTEAMCAGNAAVGTPQLLNTAPEPAKNNDRLL
                     LLPAWLRRSKETGKKESAEDRFNTAA"
     gene            complement(951..1202)
                     /gene="minE"
                     /locus_tag="VIY07_18665"
     CDS             complement(951..1202)
                     /gene="minE"
                     /locus_tag="VIY07_18665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032955 - regulation of division septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEY6383816.1"
                     /translation="MSIFNWFNRKYRRGSAVVARDRLKVLLEHEAMRGVKSDLLGLLR
                     GEIGAVICRHVTVKLENVQVKMNRGATVSTLAIDIEIPA"
     gene            complement(1199..2014)
                     /gene="minD"
                     /locus_tag="VIY07_18670"
     CDS             complement(1199..2014)
                     /gene="minD"
                     /locus_tag="VIY07_18670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006073438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEY6383817.1"
                     /translation="MAKVLVVTSGKGGVGKTTSTAALGAALAQSGNTVAVVDFDVGLR
                     NLDLIMGAERRVVFDFINVIQGTVKLSQALIRDKRLDTLWLLPASQTRDKEALTTDGV
                     ANVIAQLRQTFDWVICDSPAGIERGAMLAMRHADTAVIVTNPEVSSVRDSDRIIGLLD
                     AKTEKAEKGEQVEKHLLITRYDAVRAGKGEMLSIEDVLEILSVPLLGIVPESQEVLRA
                     SNIGAPVTLCNSSSAPARAYCDAMRRLEGENVPMTIPSDPKRLFGKLFRRRAA"
BASE COUNT          441 a          602 c          597 g          460 t
ORIGIN      
        1 aaaaacaatg acggcgatag tggccgaagc caacaagatg atagacggca gcgtaaattg
       61 gactgctatt agatacagga tcgaactcac cgcagagcag cttgccagcg catgggtgcg
      121 cccgtacagc ccaatcagag tccggaagaa atcgacgtga cagagtttgt ccgcttaggg
      181 ctgttgaaac cggcctgata tttgaccgca ggccggccca ctcttgagcg attgcttacc
      241 gcatttctca cactcgaaag caaaggaggc atttcatatt ctaagcaacc tttggggtgc
      301 gccgccgacg tatattcacg ctgccgtgtt gaaccgatcc tccgctgatt ctttttttcc
      361 cgtctccttg ctgcgacgta gccatgctgg aagaagaagt aggcgatcat tgtttttcgc
      421 cggttccggc gccgtgttga gcagctgtgg cgtacccact gcagcgttgc cggcgcacat
      481 cgcctccgtc tgtcgctgca gctcgcagag caaggaatcg atcacgatgt cgacctcagt
      541 cgcaacagat aaaaggaaac tgttaagctc gcgagcttcg ggaacaaccg ctcccgccgc
      601 ctcggtcgcg ttgcaaagac cgacaatgct aggcgcaaac gccgtggcag catctttgag
      661 tcgctttttg atcccctcta tctcgcctac aacgcgctcg cgttcgcgcc gatctttttc
      721 ctcagtaagg cgggcttcga actcggcgat ctgagcgtcg agtgctgtga catcggaagc
      781 aagggcgtcg cgtttagata caagggcgtc gcgcctctgg cgtgcgtgat tgagattgcg
      841 gccgagatcg tccatgaagg ctttttttcc aaacatttgt ctgctccgcg ttgggcggcc
      901 gcagcgcgga ccgcaggtat ggagattgga gcgctcaagc tatcgtcaca ctacgcgggg
      961 atttcgatgt cgattgcgag cgtcgaaacc gttgcgccac gattcatttt cacttggacg
     1021 ttctccagct tcaccgtaac atgacgacag atcacagccc cgatttcccc acgcaggagg
     1081 cctaagagat cggacttaac gccgcgcatt gcttcatgct caagcaaaac cttgaggcga
     1141 tcgcgcgcaa caactgccga gccgcgtcgg tacttccggt tgaaccagtt gaagatgctc
     1201 atgcagctct ccgtctgaag agcttgccga acagacgctt cgggtcgctg ggtatcgtca
     1261 tcggaacgtt ttcgccctcg agacgacgca tcgcgtcgca gtaggcacgg gccggagcac
     1321 ttgaagagtt gcatagggtg accggggccc cgatgttgga ggcgcgcagc acttcttggc
     1381 tctctggcac gatcccgaga agaggaactg agagaatttc aagcacgtcc tcgatgctca
     1441 gcatctctcc tttgccggca cgcaccgcat cgtagcgtgt aatcaacagg tgtttctcga
     1501 cctgttcccc cttctcggct ttctcggtct tagcgtcgag cagaccgatg atgcggtcgg
     1561 aatcgcgtac cgaagaaacc tccgggttgg tcacaatgac agcggtgtcg gcatgccgca
     1621 tggcgagcat cgctccgcgt tcgatgcccg ccggactgtc gcaaatcacc caatcgaacg
     1681 tctggcgcag ctgcgcaata acattggcaa cgccgtcggt ggtgagtgct tccttgtcgc
     1741 gggtctgcga agccggtagc agccacaatg tatcgagacg cttgtcgcgg atcagcgcct
     1801 gcgaaagttt gacggtacct tggatcacat tgatgaagtc gaataccacc cgtcgttcag
     1861 cgcccatgat tagatcgaga ttgcgcaagc cgacgtcaaa atcgaccaca gccacggtgt
     1921 tgccggactg agcgagtgct gcgccaaggg cggcggttga cgtggtcttg ccgacaccac
     1981 ctttgccaga ggttacaacc aggacctttg ccattgtgct ttttcctaaa agacggcttc
     2041 agttgagagg gtgatcaaca tctcggctgc tcagatggcc ttgcggcgca ggaaggccgg
//
LOCUS       DATDHO010000948         1900 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_146847, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000948 DATDHO010000000
VERSION     DATDHO010000948.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146847"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..698
                     /locus_tag="VIY07_18675"
     CDS             <1..698
                     /locus_tag="VIY07_18675"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HEY6383818.1"
                     /translation="DLTEQVRTALKVLSKNPNGFFLMVESGLIDKYAHLLDFDRAIYD
                     TIMLDNVVRQTKEWAAARGDDTLILVVADHNHPNSLIGTINDDMSVTPNVPMRERVGV
                     YEKAGFPNYPKPNAEGYPDRVDVSRRLAIFSASLPDHYETFRPKLDNPNKPTMAGQNE
                     GSYIANEQYKDVPGAALRLGNLPMFVDSSVHSGEDVILTATGPGSQRVHGSMDNTEVF
                     RVIAEALGLANGE"
     gene            916..1764
                     /locus_tag="VIY07_18680"
     CDS             916..1764
                     /locus_tag="VIY07_18680"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEY6383819.1"
                     /translation="MKDKTCIITGATAGIGLQTATRLGFLGARLLLVGRNRRKGEAAL
                     AQLRAKVPGLAAKMYYADLSQADEIVRLAAALLDDAGRIDVLVNNAGAIFARREAMPD
                     GLEHTFALNHMGYFRLTALLRPRLIASAPARIVNVASEAHRDAQLDFNDLQLLTRYSG
                     WTAYRRSKLANILFTRELARQLGNTAVTVNCLHPGFVASDFGENNRGIWRLGIKVAKR
                     FGGISVERGAETPVYLSSSPSVDEINGKYFEDCRQRAPSEAAQDDRAAARLWEKSEKL
                     AGFRMP"
BASE COUNT          424 a          543 c          540 g          393 t
ORIGIN      
        1 cggaccttac agaacaggta cggaccgcgc tcaaggtctt atcgaagaac cccaacggat
       61 tcttcctgat ggtggaatcc gggctgatcg acaaatacgc ccacctgctc gattttgatc
      121 gcgctatcta cgacaccatc atgctcgaca atgtggtgcg ccaaaccaaa gaatgggcgg
      181 cggcgcgcgg cgacgacacg cttatcctcg tggtggctga ccacaatcat cccaatagcc
      241 tgatcggcac catcaatgac gacatgagcg taacgcccaa tgtgccgatg cgcgaacgcg
      301 tcggcgttta tgagaaggcc ggcttcccga attacccgaa gccaaatgcc gaggggtatc
      361 ctgatcgcgt cgacgtgagt cggagactcg caattttctc ggccagtctg cccgaccact
      421 acgaaacctt ccgtcctaaa ctcgacaatc cgaacaagcc caccatggcg ggccaaaatg
      481 agggctccta cattgccaac gagcaataca aggacgtgcc cggcgcggcg ctgcgcctgg
      541 gcaacctgcc gatgttcgtc gattcgagcg tgcattcagg cgaagatgtc atcctcaccg
      601 ccaccgggcc gggcagccaa cgggtgcatg gctcgatgga taacaccgag gtgttccggg
      661 tgatcgcgga ggcattgggg ctcgccaacg gcgagtaact ttaagcacgt cgcggttgag
      721 caatgacccc gggaaacatc aagaatggcg acagcggcga cgttggaccg tggtccaaca
      781 cgtaggctcg ttgggcgcgt caaaatgacc gcctcgcgtc ataagcggac atcctgaacc
      841 aagcaaatga tgtccgctta gaatatgatc cgcagtctgt tgttccttcc tccagcgcga
      901 ttaggaagag aaccggtgaa ggataagacc tgtatcatca ccggcgcgac cgccggaata
      961 ggcctgcaaa ctgccacgcg tctgggcttc ctgggagcgc ggcttttgct cgttgggcgc
     1021 aatcgccgga agggtgaggc tgcgcttgca cagttgcggg caaaggtgcc tggtctcgca
     1081 gccaaaatgt actacgcgga tctttctcag gctgatgaga tcgttcggct ggcggccgcc
     1141 ctgctcgacg acgcggggcg aatcgacgtt ctggtcaaca acgctggcgc tatttttgca
     1201 cgacgcgaag ccatgcccga cgggcttgag catacttttg cgctcaacca catgggttat
     1261 ttccggctca cggcactgtt gcgcccacgc ttgatcgcct ctgcgccggc gcgaattgtt
     1321 aacgtcgcct ctgaagcgca tcgcgacgct caactcgact tcaatgatct acaattatta
     1381 acgcgctata gcggctggac agcttaccgg cgctcaaagc ttgccaacat tctgtttact
     1441 cgcgagctgg ctcgccagct tgggaatact gccgtgactg tgaattgcct gcaccccggg
     1501 tttgtcgcca gcgatttcgg tgaaaacaac cgtgggatat ggcgcctagg cattaaagtg
     1561 gccaagcgat ttgggggaat ctcagtcgag cgaggtgctg aaacgccggt ctatctttcg
     1621 tcctcaccaa gcgtcgacga gataaatgga aaatatttcg aggactgtcg ccagcgagca
     1681 cctagtgagg cggctcaaga cgacagggca gcggcacgcc tctgggagaa aagcgagaag
     1741 cttgccggtt tccgaatgcc ttgagttgca ccccggttaa ccgctcatta gtaaattcgg
     1801 tcgatggtta ccttatccgc cttgattgat agctgtcatg catacaggaa agcgaattct
     1861 gatcgtcgat gactctacga cgatgacggc tatcattttt
//
LOCUS       DATDHO010000949         4537 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_393703, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000949 DATDHO010000000
VERSION     DATDHO010000949.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4537)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4537)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4537
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393703"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(113..1102)
                     /locus_tag="VIY07_18685"
     CDS             complement(113..1102)
                     /locus_tag="VIY07_18685"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HEY6383820.1"
                     /translation="MAKGLFEIITRRTALLGLAAIVVTLAPQARAAWPEKPIKLVLPF
                     GAGGVADVTARILADKLSLKLNQRVVVENMPGPGGIAAARAVTTAPPDGYTMAYVTNG
                     TAISVAAFKSLPFDPVKDFDMISMVGTFDLVFVVNSQSEHKTLGDFIKAAKGNPGKLN
                     IGTIAVGGTQNLGGELFRLAADLNVQIVPYKTSPDIVVALLRNDVHMMVDFPPAVQGQ
                     VADGQLRILATSSPKPSPLLPNVPTADQAGVKGYEVVSWNGVGVPKDTPKQVIDTMNA
                     AIREVLAMPDVKEQFAKVGVLAQPSTPAELLDRLTSDIKKWNDVVDKAGIARK"
     gene            complement(1142..1999)
                     /locus_tag="VIY07_18690"
     CDS             complement(1142..1999)
                     /locus_tag="VIY07_18690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HEY6383821.1"
                     /translation="MNIQPGFLAHRRKPRFTLPPGSCDAHCHVFGPASKFPYAASRRY
                     TPADAPKEMLAALHAHLGVDRAVIVQASCHGTDNAAMLDCIAFDPRRYRGVAIVDDGF
                     IDKDFDALDRGGVRGVRFNFVKHLGGAPDMAVFNRVVDRIKGRGWHVVLHVDAPDIIP
                     LSDMMRKLPLSFIVDHMGRVPSAGGVDQPPLRALIELSKLENCWIKVCGSERISMPPY
                     AAAVPIARVLVEAAPTRVLWGTDFPHPNATHEADEADLVDLVPQFAPDMLAQKRLLVD
                     NPARFYGFD"
     gene            complement(2043..3179)
                     /gene="tgt"
                     /locus_tag="VIY07_18695"
     CDS             complement(2043..3179)
                     /gene="tgt"
                     /locus_tag="VIY07_18695"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEY6383822.1"
                     /translation="MSEPFSFRLLKTDGAARRGEIITPHGRVHTPAFMPVGTQGTVKG
                     LTPDTVRDTGADIVLGNTYHLMLRPGAERIAALGGLHKFMNWPLPILTDSGGFQVMSL
                     SDLRKIDERAVTFRSHLDGTMIELTPERAIEIQALLGADIAMQLDECLKLPATRDDIA
                     RAMKLSLRWAERSKRAFEICAANGHALFGIVQGGDDLSMRAESARALAAMDFHGYAIG
                     GLAVGEPQETMLKIVAETAPMLPAERPRYLMGVGTPRDLVEAVARGIDMFDCVLPTRN
                     GRHGMAFTRYGAINLANARHAADFRPLDPESAHPVARTYSRAYLHHLTKSNEILGAVL
                     LSTINLAYYQTLMAGMREAIAAGQFAKFRDHTMAQWERGDLPLV"
     gene            complement(3320..4414)
                     /gene="queA"
                     /locus_tag="VIY07_18700"
     CDS             complement(3320..4414)
                     /gene="queA"
                     /locus_tag="VIY07_18700"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEY6383823.1"
                     /translation="MKTDFFDFELPSDRIALRPAVPRDAARLLVIKPGDPQELIDHII
                     GDLPGLLRPGDCLVVNDSKVIAARLTGRRIGRGSTTPAIEATLHKRLDGSHWRAFVKP
                     AKKLEAGDRLRFGTEGKVCFLGELDAQVAQKDEGGEVTLSFSFHGPVLDQAIAERGEM
                     PLPPYIASRREPDEQDRSDYQTLFAREDGSVAAPTAGLHFTEALVGRLAERGMTLQRV
                     TLHVGAGTFLPVKADDTAGHRMHSEFGTVSAETAQALNTARERGGRIVAVGSTALRLL
                     ESATDEGGRLRAFSGETALFITPGYKFRAVDLMLTNFHLPRSTLFMLVAAFSGLETMK
                     RAYAHAIRAGYRFYSYGDACLLYPQQPALR"
BASE COUNT          908 a         1395 c         1364 g          870 t
ORIGIN      
        1 cccaaaaaga agggctcact cgctcgcagt aaagatcaat cggcatcaac tacatttcat
       61 gcaacgggcc cggaccgaga tccgggcccg ccttgagaac ggttgaggtt tgctacttgc
      121 gtgcaatgcc ggctttgtcg acgacgtcgt tccatttttt gatatcggac gtgaggcgat
      181 ccagcagttc cgccggcgtg cttggctgcg caagaacgcc gaccttggcg aactgctctt
      241 tcacatccgg catagcgaga acttcgcgta tggctgcgtt catagtgtcg atgacctgtt
      301 ttggcgtatc cttcggaacg ccgacgccgt tccaggaaac cacctcgtag cccttcaccc
      361 ccgcctggtc ggcggtcggc acgttgggca acagcgggga aggtttcggg cttgatgtcg
      421 caagaatgcg caactggccg tccgccacct gaccctgcac cgcgggaggg aaatcaacca
      481 tcatgtgcac gtcgtttcgc aggagcgcca ccacgatatc cggtgacgtc ttgtagggta
      541 cgatttgcac gttgagatcg gctgctaatc tgaatagctc gccgccgaga ttctgcgtgc
      601 cgccgacggc gatagttccg atgttgagct tgcccggatt gccctttgca gccttgatga
      661 agtcaccgag cgtcttgtgc tcggactggc tgttcaccac gaacacgaga tcgaaggtgc
      721 cgaccatcga gatcatgtcg aagtctttca cgggatcgaa tggcaggctc ttgaaagccg
      781 ctacgctgat cgccgttccg tttgtgacat aggccatcgt gtaaccatcg ggaggcgcag
      841 tggtcacggc gcgcgctgcg gcgatgccgc ccggtcccgg catgttctcg accacgacgc
      901 gctggttgag cttcagactg agcttgtcgg ccagaatccg tgcagtgacg tccgcaaccc
      961 cgcccgcgcc aaatggcaac acaagcttga tcggcttttc tggccaagcg gcccgcgcct
     1021 gcggcgccag cgttacgaca atcgcggcca aacccagcaa tgcggtccgg cgcgtgatga
     1081 tttcaaaaag ccccttcgcc atcgtgcgtt tcctccgtgt ttttcgtcgt tttattattg
     1141 tctagtcgaa accataaaac cgtgccggat tgtccaccag caggcgcttt tgcgccagca
     1201 tatcgggcgc gaactgcggc accaaatcga ccaggtcggc ctcgtcggct tcgtgagtgg
     1261 cgttggggtg cggaaaatcg gtgccccata acacacgcgt gggtgcggct tccacgagga
     1321 cacgcgctat cgggacggcc gccgcataag gtggcattga aatgcgttcc gacccgcaga
     1381 cctttatcca gcagttttcc agcttggaaa gctctatcaa ggcgcgcagc ggcggctgat
     1441 cgacgccgcc tgccgacggc acccgtccca tgtgatcgac gatgaatgac agcggcaatt
     1501 tccgcatcat gtcggaaagc ggaatgatgt cgggggcgtc cacgtgcaag accacgtgcc
     1561 aaccgcgtcc cttgatgcgg tcgaccacgc gattaaacac cgccatgtct ggggcgccgc
     1621 cgagatgctt gacgaaatta aaacgcactc cccgcacgcc gccgcggtcg agcgcatcga
     1681 aatccttgtc gatgaagccg tcatcgacga tggcgacgcc ccgataacgc ctgggatcga
     1741 acgcgatgca atcgagcatc gcggcattgt cggtgccgtg gcaactcgcc tgcacgatca
     1801 cggcacggtc gacgccgagg tgggcatgta atgccgccag catttccttc ggtgcatccg
     1861 ccggcgtgta tcgccggctc gcggcatagg gaaatttcga ggcaggcccg aacacatggc
     1921 aatgcgcatc acagctgcct ggcggcaacg tgaagcgcgg cttacggcga tgcgcgagaa
     1981 aaccaggctg gatattcata ggctcgcttt aacgaaggcc ccctgatgaa acaaccccct
     2041 cgctacacga gcggcaagtc accgcgctcc cattgcgcca tcgtatgatc gcgaaacttg
     2101 gcaaattgtc cggcggcaat tgcctcgcgc attccggcca tcagcgtctg gtagtaagca
     2161 agattgatgg tcgaaagcag caccgcgccc agaatttcgt tggacttggt caggtgatgc
     2221 aggtaggcgc gagaatatgt gcgcgcgaca gggtgagcgc tctccggatc gagtggacgg
     2281 aaatcagcgg cgtggcgggc attggcgagg ttgatcgctc catagcgggt gaaggccatg
     2341 ccgtggcgcc cgttgcgcgt cggtaggacg cagtcaaaca tgtcgatgcc gcgcgccacc
     2401 gcttcgacga ggtcccgcgg cgtgccgacg cccattaggt agcgcggccg ttcggccgga
     2461 agcatcggcg ccgtttcagc gacgatcttc agcatcgtct cttgcggctc gcccacggca
     2521 agtcctccga tcgcatatcc atgaaagtcc atggctgcga gcgcgcgggc gctctccgcg
     2581 cgcatggaca ggtcgtcgcc cccctgcacg atgccgaaca gcgcgtggcc attggccgca
     2641 cagatctcaa aagcgcgctt gctgcgctcg gcccagcgca atgacagttt catggcgcga
     2701 gcgatgtcgt ctcgtgtcgc gggcagtttc aggcattcat ccagttgcat ggcaatatcg
     2761 gcgccgagga gcgcctggat ctcgattgca cgctcgggcg tgagttcgat catcgtgccg
     2821 tcgagatgag aacgaaacgt caccgcgcgt tcgtcgatct tgcggagatc tgagagcgac
     2881 atgacctgaa agccgccaga gtcggtgagg atcggcagcg gccagttcat gaacttgtgc
     2941 aggcccccta gtgcggcgat gcgttcggca ccaggacgca acatgagatg gtaggtattt
     3001 ccaagaacga tgtcggcgcc cgtgtcgcgc acagtgtccg gcgtgagccc cttcacggtc
     3061 ccttgtgtac cgaccggcat gaaggccggt gtatgtacgc ggccatgcgg cgtgatgatt
     3121 tcgccgcggc gcgcggcgcc atcagttttg agcaatcgga aggaaaaggg ttcggacatt
     3181 acaaacttat atcagagccc cacgctttcg ggcgcgatgc cacctactcc gttcattccc
     3241 gcgcaagcgg gaatccagaa ctgactcttg aaactaattg cgctgggtcc ccgcgttcgc
     3301 ggggacgagc ggaaacctat caccgcagcg ccggctgttg aggataaagc agacaggcat
     3361 ctccgtagga atagaagcga taaccagccc gaatggcatg cgcgtaagcc cgcttcattg
     3421 tctcaagccc gctgaaagcc gccaccagca tgaacaacgt cgagcggggc aaatgaaaat
     3481 tcgtcagcat cagatcgacg gcgcggaatt tatagccggg cgtgatgaag agcgcggttt
     3541 cgccggaaaa agccctgagg cgaccacctt cgtcagttgc gctttccaac agccgcagcg
     3601 ccgttgagcc caccgccacg atgcgtccgc ctctctccct cgccgtattc agggcctgcg
     3661 ccgtttcggc cgacacagtg ccgaattctg aatgcatcct gtgcccggcc gtatcgtcag
     3721 ccttgaccgg caggaaagta ccggcgccga catgcagcgt cacccgctgg agggtcatcc
     3781 cgcgttctgc aagccgccca accagcgctt cggtaaaatg caaaccggca gtcggggccg
     3841 cgacggagcc gtcctcgcgg gcaaagagtg tctgataatc agaccgatct tgctcgtccg
     3901 gctcacggcg ggacgcgata tagggcggca atggcatctc gccccgctcg gcaatggcct
     3961 ggtccagaac cggaccatgg aaagaaaacg acagagttac ctcgcctccc tcatctttct
     4021 gtgcaacttg agcatcgagc tcgccgagaa aacaaacttt tccctccgtg ccgaaacgga
     4081 gcctgtcccc ggcctcgagc ttcttggctg gtttgacgaa ggcccgccag tgcgagccgt
     4141 ccaaccgctt gtgcagggtt gcctcaatag ccggcgtcgt gcttccgcgc ccgatacggc
     4201 ggccagtgag acgcgccgca atcaccttgc tgtcattgac caccaggcaa tcgccaggcc
     4261 gcagcaggcc cggcaagtcg ccaatgatgt ggtcgatcag ttcctgcggg tcgcccggtt
     4321 taatgaccaa aagccgggcg gcatcgcgcg ggaccgccgg ccgcagcgcg atccggtccg
     4381 agggaagctc gaaatcgaaa aagtcggttt tcatgccttc ctatgtcatg cacagccttg
     4441 tgccgagcat ccacgtattc tgcctggcat gttcaaagac gaggatggcc gggacaaagc
     4501 ccggccatga cgcaatatgg cccgattagg ttaggcg
//
LOCUS       DATDHO010000950         3850 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_146885, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000950 DATDHO010000000
VERSION     DATDHO010000950.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3850)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3850)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3850
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_146885"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..1262
                     /locus_tag="VIY07_18705"
     CDS             108..1262
                     /locus_tag="VIY07_18705"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383824.1"
                     /translation="MSVTFRALVTGVAAIGLLAASQASYAQEKTIKIGALFPMSGPGS
                     YFGAQDKQGVELALEQLNKAGVNGYKFVVQYEDSSCAPLPATQAAKRLIEQFKPDVII
                     GEECSDATLAVMPIVEQSKVPLLNAGSSSIKVTEPGNPWTFRIMPNEVMQGVNLAENA
                     YKRINARNAVLLFENTNAGIGNAQVFKENFTKLGGKVLAEIGFGRDVNDFTAIATRIA
                     GLGKIDVIPTYTLEGQGLKITQALAQAGITKGGGGDAIQIGTIWLPFGFEQKAGKAAL
                     GYIRIVQFDPTDTRDVVKDFITTFKAKYNADPTHLNAHAYDQIMLIADVVKRGGKDPQ
                     SIRDGLAATKNYSGVTGSVEFDKTNQNTKMDTVHYMETKPDMSWTSLKWN"
     gene            1270..2154
                     /locus_tag="VIY07_18710"
     CDS             1270..2154
                     /locus_tag="VIY07_18710"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383825.1"
                     /translation="MTTTIVLQQAINGVVFGSLYVLVALGLTLIYGVLVQINFAHADF
                     VTLGAFAAYFFMHLIGAGYILSIGVAFIVGAALGWLINASIFTPLRRKGNELLPLIAT
                     IGVSVMMQNLMLAWFGPIPYAFETEYSSQVIRFAGIFVSWQNIIIIAVSSVTIALLYA
                     FMKFTFLGKALRAVSQDRETAGLMGINPNYLIMLTFVIASALAGMAGAMLAPVLVLTP
                     FAGTSVIVKAFAIVIIGGFGNVEGTILAGLIVGLIESYTTQFLDPGLIDIVVFALLLL
                     MLAIKPTGLIAERREENV"
     gene            2147..3163
                     /locus_tag="VIY07_18715"
     CDS             2147..3163
                     /locus_tag="VIY07_18715"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383826.1"
                     /translation="MSDSAISQRLGSGKTVLRSRPVGYLLAALCIIALPLIFNDTYWR
                     TNLTICAINVLLALGLDFILGYTGQLNLGHSAFYGLGAYVSTLLIVKLGIPFWAAFVA
                     GVAFAGLAGMFLSLFAVRLRGHYLAIASLGFAVIIYQILLNWISLTQGPLGIYGISPP
                     PAIVVAGTVLADFRNLTTFFYLVSGFTLLVYLLLDQLVRSPVGETLTAIREDEVSAAS
                     LGINGAAWKVFAFGLGAAVAGAAGCFYASFVGTLVPDAFYVSEAFTILAMVIVGGMGT
                     LIGPVFGAILLTLLPEILRGIGDLRLVVYGAALTFVVLFMPGGLAQAARVVQEKLRLG
                     GRGS"
     gene            3160..>3850
                     /locus_tag="VIY07_18720"
     CDS             3160..>3850
                     /locus_tag="VIY07_18720"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEY6383827.1"
                     /translation="MTEAAAAEPPVATGTAPLLRAQNLHKSFGGVHAVFDISLDVPTG
                     SIFAIIGPNGAGKSTLLNLISGIYRPDSGSISLDGQDLSGMRAHRRVRLGLARTFQKI
                     RLFKQLSVLDNVIAGFHVHHKIPAWQYVIHGTAFAHDRQHCREDALRLLEFFGMSARL
                     NVFAGELSYGEQRMLELARSLATKPRLLLVDEPAAGLNAAEVGVLLDRIRTLRSSGIT
                     VVVVEHNMDLVM"
BASE COUNT          719 a         1144 c         1125 g          862 t
ORIGIN      
        1 ccgccgtgcg cctgcgacac agcttactac cccacgtcgc tttacccagc cgcacgatcg
       61 ttgctaggct ttgcgttagt gacgatcgtt cctaggagga tgaggaaatg tccgtgacat
      121 ttcgtgctct cgttacaggc gtcgctgcga tcggcttgtt ggcggcaagc caggcgagtt
      181 acgcgcaaga gaaaaccatc aaaatcggtg ctctttttcc gatgtcggga ccgggctcgt
      241 atttcggcgc ccaggacaaa caaggcgtcg aactggcgct ggagcaactc aacaaggccg
      301 gcgtgaacgg atacaagttc gtcgttcagt acgaggattc aagctgcgca ccgttgccgg
      361 cgacgcaggc cgccaagcgc ctgatcgagc aattcaagcc ggacgtcatt atcggcgaag
      421 agtgttcgga tgccacgctt gccgtgatgc ccattgttga acagtcgaag gtgcctctgc
      481 tcaatgccgg ctcgtcctcc atcaaggtca ctgagccggg caacccctgg accttccgca
      541 tcatgccgaa cgaggtcatg cagggcgtca acctcgcgga aaatgcatat aaacgcatca
      601 atgcgcgcaa tgctgtcctg ctttttgaaa acaccaatgc cggcatcggc aacgcccagg
      661 ttttcaagga gaactttacc aagctgggcg gaaaagtttt ggccgagatc ggctttggac
      721 gcgacgtcaa cgactttacc gcgattgcga cgcgaattgc cggtctcggc aaaatcgacg
      781 tcatcccgac ctacacgctt gaaggccagg gcctgaagat aacccaggcg ttggcgcagg
      841 ccgggatcac caagggcggc ggcggggatg caattcagat cggcaccatt tggctgccat
      901 tcggatttga gcagaaggcc ggcaaggctg cgctgggtta cattcgtatc gttcagttcg
      961 atccaacgga tacccgcgac gtcgtgaaag acttcatcac gacattcaaa gccaagtaca
     1021 acgccgaccc gacgcacctg aacgcccacg cttacgatca gatcatgctg atcgcagatg
     1081 ttgtcaaacg cggcgggaaa gatccccagt cgatacgaga tggacttgcc gcgacgaaga
     1141 attattcggg ggtgacgggg agcgtggaat tcgacaagac caatcagaac accaagatgg
     1201 ataccgtcca ttacatggag accaagcccg acatgtcatg gacaagcctg aagtggaact
     1261 gacccgaaga tgacaaccac gatcgtccta caacaggcga tcaacggcgt cgtttttgga
     1321 agtctctacg tcctggtggc gttaggcctg acgctgatct acggcgtgct cgtgcagatc
     1381 aactttgcgc acgccgattt tgtcacgctc ggcgccttcg ccgcctattt tttcatgcac
     1441 ttgattggcg ccggctacat cctcagcatc ggggttgcat tcatcgtagg cgccgcgctc
     1501 ggctggctga tcaacgcgtc gattttcacc ccgttacgcc gcaagggaaa cgagctgttg
     1561 ccgctcatcg ccacgatcgg cgtttcggtg atgatgcaaa acctgatgct ggcctggttc
     1621 gggccgattc cctacgcttt cgaaacggaa tacagcagcc aggtcatccg ctttgcgggc
     1681 atctttgtgt cctggcagaa catcatcatt atcgcggtgt cctcggtgac catcgcgctg
     1741 ctctacgctt tcatgaaatt cacgtttctc ggcaaggcgc tgcgcgcggt ttcgcaggac
     1801 cgggagactg ccggacttat gggcatcaat cccaactatc tcatcatgct gacattcgtg
     1861 atcgcctccg cgcttgccgg gatggcgggc gcgatgctgg cgcccgtgct cgtgctcacg
     1921 ccttttgccg gcacctcggt gatcgtgaag gcgtttgcaa tcgtcatcat cgggggcttc
     1981 ggcaacgtcg aaggaaccat tctcgcgggt ctgattgtcg ggctgattga aagctacacc
     2041 acgcaatttc tcgatccggg cctgatcgat attgtcgtat tcgcgctcct gttgctgatg
     2101 ctggcaatca agccgaccgg gctgatcgcg gaaaggcgcg aagagaatgt ctgattccgc
     2161 gatttcgcag cggttgggta gtggcaagac ggtgctgcga tcgcggccgg tggggtatct
     2221 gcttgccgcg ctctgcatca tcgcgctgcc gctgatattc aacgatactt attggcgcac
     2281 gaacctgacg atctgcgcca tcaacgtcct gctcgcgctc ggccttgatt tcatcctggg
     2341 ctataccggg cagctcaatc tcggtcattc cgccttttac ggtctcggcg cctacgtttc
     2401 gaccctgctg atcgtcaagc ttggcattcc tttctgggcc gcgttcgtcg caggcgttgc
     2461 cttcgcgggt ctggccggga tgttcctttc cctcttcgca gtgcggctgc gcgggcacta
     2521 ccttgcgatt gcctcgctcg gctttgctgt gatcatttat caaatcctgc tcaactggat
     2581 cagcctaacg cagggaccgc tcggcatcta cggaatttcg cccccaccgg cgattgttgt
     2641 cgccggaacg gtgctcgccg actttcgcaa cctgaccacc ttcttttacc tggtgtccgg
     2701 gttcactctg ctcgtctacc tgctgctcga tcagttggtc cgctctccgg ttggggaaac
     2761 gctcactgct atccgcgagg acgaggtatc cgctgcctcg ctcggcatca atggcgcggc
     2821 gtggaaagtg ttcgcgttcg gcctgggcgc agcggttgcc ggtgccgcag gctgcttcta
     2881 tgcgagtttc gtcggcacgc tggtgcccga cgcgttctac gtgagcgagg cgttcaccat
     2941 cctggccatg gtgattgtcg gcgggatggg cactttgatc ggcccggtgt tcggcgcgat
     3001 cctgttgacg ctgctgcctg aaatcctccg cggcatcggc gacctgcgtc tcgtcgtcta
     3061 tggggccgcg ctgacgttcg tcgtgttgtt catgcctggc ggtctcgctc aggctgcccg
     3121 agtggtgcag gagaagcttc ggctaggcgg gcgcggatca tgaccgaagc tgcggcagcc
     3181 gaacccccgg tcgcgaccgg cactgcaccg ctgctgcggg cgcaaaatct gcacaagagc
     3241 ttcggcgggg tgcacgcggt ttttgacatc tcactcgacg ttccgaccgg ctccattttc
     3301 gcgatcatcg gtccgaacgg tgcaggcaag tcgacgctgc tcaatctgat cagcggcatc
     3361 taccgacccg attcgggttc aatctcgctt gatggccagg atctctctgg aatgcgcgcg
     3421 catcggcgcg tgcggctcgg gctcgcacgg acatttcaaa agatccgcct tttcaagcag
     3481 ctcagtgtac tcgacaacgt gatcgccgga tttcacgttc atcacaagat tccggcctgg
     3541 caatatgtca ttcacggcac agccttcgcg catgaccggc agcactgccg cgaagacgca
     3601 ctgcggctgc ttgaattctt tgggatgagc gcccggttga atgtgttcgc cggagagttg
     3661 tcttatggtg agcagcgcat gctcgaactt gcacgctcgc ttgccaccaa gccccggctt
     3721 ctgctggtcg acgaaccggc ggcaggattg aacgcggccg aggtcggtgt cctgcttgat
     3781 cgcatccgga cattaaggag cagcggcatc acggtcgtcg tcgtcgagca caacatggac
     3841 ctggtgatga
//
LOCUS       DATDHO010000951         4363 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_393724, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000951 DATDHO010000000
VERSION     DATDHO010000951.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4363
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_393724"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2870
                     /locus_tag="VIY07_18725"
     CDS             <1..2870
                     /locus_tag="VIY07_18725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HEY6383828.1"
                     /translation="TVESTGVVDGSLDRMQIVMPTDFTMPPGGLNIRLTDTFLGQEAR
                     LHDFKRDAMLAFVRANKLNRIIMSGGRAPKIGIITTGKAYLDVRQAFDELGIDEIKCN
                     DLGLRVFKVACVWPLGRQELAEFAQGLDLIIVVEEKRSLIEVQVREELYGTANQPVCI
                     GKKDEQGNWLFPVKGALDPNDIAICIGERLLRYGSNEELAANVARLKSAQGALSETTD
                     VAQRIPYFCSGCPHNTSTRVPEGSRAYAGIGCHYMAQWMDRKTLGYTQMGGEGANWIG
                     EAPFSNRGHVFQNLGDGTYNHSGYLAIRAAVASGVTMTYKILFNDAVAMTGGQANEGG
                     LTVPQIASQVAAEGAKRVVVVTDEPWKYGKDIEWPRGLTVHHRDELDAIQRELATVPG
                     VTVLIYDQTCAAEKRRRRKRGAFPDPDKRVVINDLVCEGCGDCGVKSNCVSVQPLETE
                     WGRKRTIDQSSCNKDYSCLKGFCPSFVTVHGAKLKKGEALAEPKEWPALPTPKAPLLN
                     HPYGIIVTGIGGTGIVTIGAIVGMAAHLEGKGVGIIDMAGLAQKGGAVSSHIRIANTP
                     SDIHAIRIAAGGADLVLGGDIVVVGAKKVLGAMKTGITRVIVNTAEFLPGDFTRNADF
                     SLPTERLKRAIIAHAGRERTQFVDAGRLATALLGNSVGANMFMLGYAYQSGALPLSAE
                     AVERAIEMNGEAVAMNIAAFRYGRRAAVDPRGLEALIKPRPQEQNDSLRLSQSFADTV
                     NRRVEFLTAYQNADYASRYRIWVEKARTMEAEKAPGHCGLAEAVAHYLFKLMAYKDEY
                     EVARLYSETSFLDRVRSTFDGDKLRFEFHLAPPLLARRNPETDEPKKMSFGPWILNVF
                     ALLAKFRFLRGTAFDLFGYTAERKTERRLISDYEQLLEELLERLTPANHHVAVALATI
                     PEKIRGYGPVKQRHLAAAKAEEAVLREEFRSGATGFLKAAE"
     gene            3022..>4363
                     /locus_tag="VIY07_18730"
     CDS             3022..>4363
                     /locus_tag="VIY07_18730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6383829.1"
                     /translation="MASNAAAGAKTFPKLLIRNANVCGAQPAMRHKDLGIWQTWTWSQ
                     TLDIVRAYAVGLHRLGVKRGETVAIVGGNRPKLYWSVMAVQMLGAIPVPVYADAVADE
                     LAYVLAHAEVRFAAVEDQEQVDKILSVMKRLPQLELMVYDEKRGLRDYDHSRLRPIDD
                     VIDEGRKALADPAVAAWLDNEIAASKGSDPSIILYTSGTTGTSKGVVLTNEGSIRAAA
                     DTVAFDKLTEKDVALAYLPLAWVGDHYLNYAQGLVSGFCTACPESPDTAMSDLREIGP
                     SFYFAPPRTLEQLLTRVMIRMEDAGLIKRKVFHYFIAVARRYGERILNGESVPLTGRL
                     LYAIGNVLVYGPLKNVLGFSRVRVAYTAGEAVGPDLFSFYRSIGLNLKQLYGQTEAFL
                     YVTAQPDGEIYADTVGPACPNVDIRIADNGEVQFKSPGMFSGYFKDEAKTAEVMT"
BASE COUNT          899 a         1277 c         1343 g          844 t
ORIGIN      
        1 agaccgtgga gtcgaccggg gtggtcgatg gttcgctcga tcgcatgcag atcgtgatgc
       61 cgaccgattt cacgatgccg ccaggcggtc tgaacatccg cctcaccgac actttcctcg
      121 gccaggaagc gcgcctgcat gatttcaagc gcgatgccat gctggccttt gtgcgagcca
      181 acaagctcaa tcgcatcata atgtcgggag gacgggcgcc gaagattgga atcatcacca
      241 ccggcaaagc gtatctcgac gtgcgccagg ctttcgatga gctcgggatc gatgagatca
      301 aatgcaatga tctcggcctt cgggttttca aggttgcctg cgtctggccg ctcgggcgac
      361 aggagctggc ggaattcgcc caagggctcg acctcatcat tgtcgttgag gaaaagcgct
      421 cgctgatcga agtgcaggtt cgtgaagaac tttacggcac ggcaaatcag ccggtctgca
      481 tcgggaagaa ggacgagcaa ggaaactggc tattcccggt caagggcgcg cttgatccga
      541 acgatatcgc aatctgcatt ggcgaacggt tgctgcgcta tggctctaac gaagagctcg
      601 cggcaaacgt ggctcgcctg aaatccgcgc aaggcgcgct gtccgaaacg actgatgttg
      661 cccaacgcat tccgtatttc tgttcgggat gcccgcacaa cacgtcgacc cgcgtccccg
      721 aaggcagccg cgcctatgcc ggcatcgggt gccattacat ggcgcagtgg atggaccgca
      781 aaacgctcgg ctacacccag atgggaggcg agggcgccaa ctggattggc gaagcgccat
      841 tttccaaccg cgggcacgtt ttccagaatc ttggtgacgg cacttacaac cactcaggct
      901 atctcgcgat ccgcgctgcg gtcgcctccg gcgtgaccat gacctacaaa atcctgttca
      961 acgatgcggt cgccatgacc ggcgggcagg cgaatgaggg cggattgacg gtgccgcaga
     1021 tcgcatcgca agtggccgcc gaaggggcga agcgcgtcgt cgtcgtcacc gacgagccat
     1081 ggaagtacgg gaaagacatc gaatggcccc gcgggctgac ggtgcatcac cgcgacgaac
     1141 ttgatgccat tcaacgcgag ctggccaccg tccccggcgt caccgtgctc atctacgacc
     1201 agacatgcgc tgccgagaag cgccgacgcc gcaagcgcgg tgcatttccc gatcccgaca
     1261 agcgggtggt catcaatgac ctggtttgcg agggttgcgg tgattgcggc gtcaaatcga
     1321 attgcgtatc ggtgcagccg ctggaaaccg aatggggccg caaacgaacc atcgaccagt
     1381 cgagttgcaa caaggactac tcctgcctga agggcttttg cccatccttc gtgactgtgc
     1441 acggcgcgaa gctcaaaaaa ggcgaggccc tcgccgaacc gaaagaatgg ccggccctgc
     1501 cgacgcccaa ggcgccgctt ctcaatcatc cttacggaat catcgtcacg ggaattggcg
     1561 gaaccggaat tgttacgatt ggagccatcg tcggaatggc ggcgcacctc gaaggcaagg
     1621 gcgtcggcat catcgatatg gcaggtttgg cgcaaaaggg cggcgcggtc tcgagccata
     1681 ttcgcatcgc caatacgccg tcggatattc atgccatccg catcgcagcg ggcggcgccg
     1741 acctggtttt gggtggagac attgtcgttg tcggcgccaa gaaagtactt ggcgcgatga
     1801 aaactggaat tacgcgggtt attgtgaata ccgcggaatt tctgcctggc gatttcacgc
     1861 gcaacgccga tttttctctg ccgacggagc gtctcaagcg cgccatcatc gctcatgcgg
     1921 gtcgcgaacg cactcagttc gtcgatgccg ggcggctggc gactgcgctg ctaggcaact
     1981 ctgtgggcgc gaacatgttc atgctcggct atgcctacca aagcggagcg ctgccgcttt
     2041 cggcggaggc cgtcgagcgg gcgatcgaaa tgaacggcga agccgtggca atgaatattg
     2101 ccgcgtttcg ttatgggcgc cgcgccgccg tcgatccgag agggcttgag gcactgatca
     2161 agccgcgtcc gcaggaacag aatgattccc tgagactgtc gcaatctttc gccgacaccg
     2221 tgaatcgtcg cgtggaattt ctgaccgcct atcaaaatgc ggattacgcg agccgctatc
     2281 gaatctgggt cgagaaagct cgcacgatgg aagccgaaaa agcgccaggg cactgcggac
     2341 ttgcggaagc tgttgcgcac tacctcttca agctgatggc gtacaaggac gaatatgaag
     2401 tggcgcgcct gtacagcgaa acctcgttcc ttgatcgggt tagatcgaca ttcgacggcg
     2461 acaagctgcg attcgaattt catttggcgc cgccgctgct ggcgcgacgc aatccggaaa
     2521 cggatgaacc gaagaaaatg tcgttcggcc cctggatcct gaacgttttt gcactgctgg
     2581 caaaattcag gttcctgcgc ggcaccgcct tcgatctttt cggctatacg gccgagcgca
     2641 agacggagcg ccgcctgatc tccgactatg aacaattgct cgaggaactg ctggaacggc
     2701 tgacgccggc caaccatcat gtcgccgtcg cgctagcgac gattcccgaa aaaatccgtg
     2761 gatacgggcc ggtcaagcag cggcatctgg ccgcggcaaa ggccgaagaa gcggttctgc
     2821 gggaggagtt tcgctcgggg gcaactggtt ttctcaaggc agcggaatag cttggctcct
     2881 gcgcgaccca tttacgtgtg atctgatact tgaccgccat ccggtggtgt tttcatatcg
     2941 agacaacaag atcgtcactg cagacggcga ggggttatgg agccgcgccg gcgcgcgcgg
     3001 ccgcaccggg aggactgagc tgtggcgtcg aacgccgccg cgggcgcgaa aacgtttccg
     3061 aagctgttga tccgtaacgc caatgtctgc ggcgcgcagc cggctatgcg gcacaaggat
     3121 cttggcatct ggcaaacctg gacctggagc cagacgctgg acattgtccg cgcctatgcc
     3181 gtcggtctgc atcggctggg tgtcaaacgg ggcgagaccg ttgcaatagt tggtggcaat
     3241 agaccgaagc tttactggtc cgtgatggcg gtccagatgc tgggcgcgat tcccgtgccg
     3301 gtctacgccg atgctgtcgc cgacgaactg gcttatgtgc tcgctcacgc cgaggtccga
     3361 tttgcggcgg tcgaagacca ggagcaggtc gacaagattc tgtcggtcat gaagcggctc
     3421 ccccagctgg agttgatggt ctacgacgag aagcgtggtc tgcgcgacta cgaccacagt
     3481 cgccttcgcc cgatcgacga cgttatcgac gaaggacgta aagctctggc cgatcctgcc
     3541 gtcgcggcct ggctcgacaa cgaaatcgcg gccagcaaag gcagcgatcc atcgatcatc
     3601 ctctacacgt caggcacgac cggcacgtcc aagggcgtcg tgctcactaa cgaaggttcg
     3661 atacgtgccg cggccgatac tgtcgctttc gacaagctaa cggaaaaaga tgtggcactc
     3721 gcgtatctgc cgctcgcctg ggtcggtgac cactatctca actacgcgca aggcctggtc
     3781 tccggcttct gcaccgcctg tccggaaagc cctgacacgg caatgagcga tctgcgtgaa
     3841 atcggcccca gcttctattt cgcgccaccg cgcacgctcg agcagctgct cacgcgcgtc
     3901 atgatccgga tggaagatgc cggtctgatc aaacgaaagg tgtttcacta tttcatcgcc
     3961 gtggcgcgcc gttatggcga gcgcattctc aatggcgaga gcgtgccgct gacggggcgg
     4021 ctgctctacg caatcggcaa tgtccttgtc tatggcccgc tcaagaacgt actcggcttc
     4081 tcgcgcgtgc gcgtcgccta taccgccggc gaggccgtcg ggccggatct tttcagcttc
     4141 taccgctcga tcggattgaa cctgaagcag ttgtacgggc agaccgaagc gtttctttac
     4201 gttacggccc agccggatgg cgaaatctat gccgatacgg tcgggcctgc atgcccgaac
     4261 gtcgacatcc ggatcgccga caatggcgag gtgcagttca agtcgccggg catgttctcg
     4321 ggctatttca aggatgaggc aaagaccgca gaggtgatga cct
//
LOCUS       DATDHO010000952         1960 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_197288, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000952 DATDHO010000000
VERSION     DATDHO010000952.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197288"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..515
                     /locus_tag="VIY07_18735"
     CDS             <1..515
                     /locus_tag="VIY07_18735"
                     /inference="COORDINATES: protein motif:HMM:NF019351.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HEY6383830.1"
                     /translation="HAVAVDGSGQAIGVLHAPDVAAKPNLAMPTFGGRALSYGDLRAM
                     APTALPPGPARPFTLALQGNMAKYVWTINGQVYPKTDPLLIHQGDRVQIQLRNETSMW
                     HPMHLHGHFFRVLQGAGERAPLKHTVNVAPRETVRIEFAADNPGRWIFHCHNLYHLEA
                     GMARVFEYEA"
     gene            complement(1013..1960)
                     /locus_tag="VIY07_18740"
     CDS             complement(1013..1960)
                     /locus_tag="VIY07_18740"
                     /EC_number="4.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014079.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UbiD family decarboxylase"
                     /protein_id="HEY6383831.1"
                     /translation="MVQDQKSVSLLMVPGKHGYMHREKYFKRGEKMPLALVVGGDPLF
                     FFMAGTEHPYGLCEYDIVGGMRRKPVELVRGKLTGLPFPASAEIVLEGFLSNENRKNE
                     GPFGEWTGYYASDESAQPVLEIEAVYHRNDPIILGVPPLGGGSDEMARYRAIMRSAML
                     KHELQNAGVPDVTQVWCHEVGASRMLHGIAIKQRYPGHAKQVGVLASSCGSTVYGCKM
                     VIVVDDDIDVSNFEQLMWAMVTRCDPATSIDILRRMRTSPADPRLLPEQRKMKDLTNS
                     RMVVDATRPYDWLDKFPRVNAPSPESTHKGREKFGYLLK"
BASE COUNT          394 a          629 c          548 g          389 t
ORIGIN      
        1 tgcacgcagt cgcagtcgac ggttccggac aagcgatcgg tgtgctgcac gcgccggatg
       61 tcgcagcgaa gccaaatctc gcgatgccga cgttcggagg ccgagcgctt tcctacggcg
      121 acctgcgcgc catggcgcca acagcgcttc ccccgggtcc ggcgcggccg ttcacactcg
      181 cgttgcaagg caacatggcc aagtacgtgt ggacgatcaa cggacaggtt tatccgaaga
      241 ccgatccgct cctgatccat cagggcgatc gcgtgcagat ccaattgcgc aacgagacct
      301 ccatgtggca cccaatgcac ctgcacggtc actttttccg cgtcctgcaa ggcgcggggg
      361 aacgcgcgcc gctcaagcac accgtgaatg tcgcgccgcg cgagactgtc cgcatcgagt
      421 tcgctgccga caatccggga cggtggatct tccactgcca caacctctat cacctcgaag
      481 ccggcatggc gcgggtgttc gagtacgagg cgtgaggtcg tacgtgtgcc ccttccagta
      541 accctgacca cccggccgga cgtgaactca tggtcggcgc tcttcctgcc acagggtccc
      601 tattttccca tcggcaaccg aacgagaaat ccttgccttc atgactcatc gcgcggtatg
      661 aagcttttcc tgctggcagc tatcattagc cggtgagaac cgccggagcg gcgcatggac
      721 aggcaagtcc tccgaatccg tcccggtacg ttgtccacat cctgccaatc ctcatcgatt
      781 gcacttcgaa tgcgtcggag aagcatttga cttcatcgaa gaaacgttga ccaaagactg
      841 ggtgggattt cgaaccgagt tgagcagact tgggattacg cccatcgcat cctataccac
      901 ccagttcatc ggcaatccga gtggcgacag tcagcgggca ttcacctaca gcgggacgtt
      961 gcaggcctcg ataaactggg acctccaaag actcctcggc actcccggcc tttcatttca
     1021 gcagatagcc gaatttctcc cgccctttgt gggtactctc tgggctgggc gcgttgacgc
     1081 gagggaactt atccaaccaa tcatagggtc gagtcgcgtc cacgaccatg cgggaattgg
     1141 tgagatcctt catctttcgc tgctccggca aaagacgcgg atccgccggc gaggtccgca
     1201 tgcgccgcaa aatatcgatt gatgtcgccg ggtcgcagcg cgtcaccatc gcccacatga
     1261 gctgctcgaa gttcgaaacg tcgatatcgt cgtccaccac aatcaccatc ttgcacccgt
     1321 acacggtaga gccgcagctc gacgcgagca cccccacctg cttggcgtga cctggatagc
     1381 gttgcttgat ggcgatgccg tgcagcatcc gcgacgcgcc gacttcatgg caccaaacct
     1441 gggtgacatc cggcactccg gcgttctgca attcgtgctt gagcatggcg gagcgcatga
     1501 tggcccggta gcgggccatc tcatcggagc cgccgcccag gggcggcacg ccgaggataa
     1561 tcggatcgtt gcgatggtag acggcttcga tttcaagtac gggctgcgca ctctcgtccg
     1621 aggcgtagta accggtccac tcgccaaaag gaccttcgtt cttacgattc tcattgctca
     1681 agaaaccttc gaggacaatc tcggcgcttg ccggaaaggg cagcccggtc agtttgccgc
     1741 gcaccaactc caccggcttg cggcgcatgc caccgacgat gtcatattca cagaggccgt
     1801 aaggatgctc agttccggcc atgaaaaaaa acagcggatc gccgccgacg accaatgcca
     1861 gcggcatttt ttcgccgcgc ttgaagtact tctcccggtg catgtagccg tgcttgcccg
     1921 gcaccatcag caggctcacg cttttctgat cctggaccat
//
LOCUS       DATDHO010000953         2087 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_488666, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000953 DATDHO010000000
VERSION     DATDHO010000953.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2087
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488666"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..594)
                     /locus_tag="VIY07_18745"
     CDS             complement(<1..594)
                     /locus_tag="VIY07_18745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HEY6383832.1"
                     /translation="MRGAGVTAVLGPTNTGKTHLAIERMLAHSSGVIGLPLRLLAREV
                     YNKIADRVGTDAVALVTGEEKIKPPNPRFWVCTVEAMPRDLDVAFMAIDEVQLGADFE
                     RGHVFTDRMLNARAREETLVLGASTVRPMVEKLLPGAHIVSRPRLSTLSYAGEKKLTR
                     LPPRSAIVAFSADEVYAIAELIRRQRGGAAVVLGALSP"
     gene            complement(925..1779)
                     /locus_tag="VIY07_18750"
     CDS             complement(925..1779)
                     /locus_tag="VIY07_18750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HEY6383833.1"
                     /translation="MRHQESNLLLTSVMLVLAISASSVPASAQARLEARYSATVAGIP
                     IGTGSWAIDVSDTQYSATVNGATSGLLRAFTGGQGTATARGTLSAGRLSSIYVGSMSL
                     RNNQKFDSIRITITNGNVKEYKVDPPADNDPNRVPITEASQRGVLDPMTAALVRMPGN
                     GDPLVPEACQRTQEVFDGRLRYDMQFAFKRMERVKAIKGYSGPVVVCSAYFTPIAGFI
                     PSRAAIRYLAKQRDMEVWLAPIAGTRVLVPFRAQGATPLGQAIVEASEFVSIPIQAGA
                     SANGSKTQ"
BASE COUNT          401 a          639 c          643 g          404 t
ORIGIN      
        1 gggcgagagg gcacccagca ctaccgccgc accgccacgc tggcggcgga tcagttcagc
       61 gattgcataa acctcgtccg ccgaaaaagc gacgatcgcc gatcgcggcg gcaaccgcgt
      121 cagctttttc tctccggcat agctgagcgt tgacagccgc ggccggctca cgatgtgggc
      181 gccgggcaac aatttctcca ccatcggccg gaccgtcgag gcgcccaaca ccagggtctc
      241 ctcgcgggcg cgggcgttga gcatgcggtc ggtgaacacg tggccccgtt cgaaatctgc
      301 ccccagctgc acctcgtcga tggccataaa cgcgacgtcg agatcgcgtg gcatcgcttc
      361 gacggtacag acccagaagc gcgggttcgg cggcttgatc ttttcctcgc ccgtgaccaa
      421 tgcgactgcg tccgttccca cccggtcggc gatcttgttg tagacctcac gcgcaagcag
      481 ccgcagcggc agtccgatga cgcccgacga atgcgccagc atgcgctcga tagcgagatg
      541 ggtcttgccg gtgttggtag ggccgagcac ggccgtgacg ccggcgccgc gcattcgcga
      601 tgctcgattg ggctgcgggg aaaaactgat gggcatacgc cgtccggact ggtggaagag
      661 cgctcaggca cgcttccgag aggctttctg tatcacaatg cgacgctgga gcatgcgcat
      721 ggttaagctt tagaacgagt ctggaacgaa tcgcgcccga atcgctgact ccggagctgt
      781 atagcttcgt tcacggcgac atctggcgag cgtcgtctgc acacccacaa gatggagtag
      841 cagacgcttg gttcaagtgg ctgcaagcgg ttccgaaagt taacacagcg ccggcacccc
      901 tctgctcacg gagagtcaag gggcttattg cgtcttcgaa ccgttggccg aagccccggc
      961 ctggattgga attgaaacga attccgacgc ctcgacaatt gcctggccga gcggtgtcgc
     1021 cccttgcgcc cgaaaaggaa ccagtacgcg ggttccggca atcggcgcga gccatacttc
     1081 catatcgcgc tgcttggcca gatatctgat ggccgcgcgc gagggaataa agccggcgat
     1141 cggtgtgaag tacgccgagc aaaccaccac ggggccggaa tagcctttga tcgccttcac
     1201 cctctccatt cgcttgaagg caaactgcat gtcgtaacgg agtctgccgt cgaagacttc
     1261 ctgcgttcgc tgacaggcct ccggaacgag agggtcgccg tttccgggca tgcgcacaag
     1321 tgccgccgtc atcggatcaa gaacgccgcg ctgggaggct tcggtgatcg gcacacgatt
     1381 ggggtcgtta tcggcgggcg gatcgacctt gtactccttc acgttgccgt tggtgatggt
     1441 gatgcgtatt gaatcgaact tctggttgtt gcgtaagctc atactcccca cgtagatcga
     1501 ggacagccgt ccagcgctca gcgtgccacg tgcggtggcg gtgccttggc cacctgtaaa
     1561 agcgcggagc aaacccgacg tcgcgccgtt gaccgtggca gagtactggg tgtcactcac
     1621 atcgatggcc cagctgccgg tcccgatcgg aatcccggca actgtcgctg agtagcgcgc
     1681 ttcgaggcgt gcctgagcag acgccggaac cgacgatgcg gagatcgcca ggaccaacat
     1741 aactgacgtc aggagcagat tgctctcttg gtgacgcaag acttgttcct tccgcgctcg
     1801 gcgccaaatg atttacaggg ccggatacta tcacccaacc cggcgagcga tgggcgcgcg
     1861 tgctcggagg ctggccgcaa ggttgacgcc gaacggcact tcgtcggcgc ggatttagtc
     1921 gaatctgtgt tcgcagccgg gggaagcacc gtgaaggcat agaaaatccc ttaaaattcg
     1981 attcaatcgc ttggcttgac gcccttaatc tcgctctcta tacgtccgct ccatctctaa
     2041 atcccggcgt ttgaccgatt tccggcacct gtgggtgccc gcgtttt
//
LOCUS       DATDHO010000954         2452 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_147033, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000954 DATDHO010000000
VERSION     DATDHO010000954.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2452
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147033"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VIY07_18755"
     CDS             <1..282
                     /locus_tag="VIY07_18755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383834.1"
                     /translation="YLKKYPEAAPRGVSAADAIAQTVKSVRKRITLYRPPYAGGKTGQ
                     IFESEWREEAKLAGLSIPDVRPLFTQELTDEINAFDKAPIIAAAKAYKA"
     gene            complement(294..1373)
                     /locus_tag="VIY07_18760"
     CDS             complement(294..1373)
                     /locus_tag="VIY07_18760"
                     /inference="COORDINATES: protein motif:HMM:NF014841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6383835.1"
                     /translation="MARIVVEEDHFLKTVPVILDPATPAEHQAAVADFFAHDLDFIQW
                     RDALRQRLSGLFPATVTFAEDQADFDMQLRDADGAIVESFVVTSEALENAPKLHVVHK
                     FGHLTANIDERACAARNIAVHRVRRRVNVAVAEQAFALMIALGKRVNDLSGVVTADAL
                     AKAGYPLRPYDRRFIGNANFARIPNLRALQGAALGIVGLGEVGREIAARASAFEMNIL
                     YHQRRPLPAADEAALAARYVPLPTLLAQSDYIVLQVPLNDSTRGMIGREEIAHIKPGA
                     ILVNVARAEIVQRDALIEALDSGRVAGLGLDVGYSEPAKPDDSLLKYKDGNVILMPHT
                     AVANRHLAAADLEEMCLNLARGLNR"
     gene            1419..1955
                     /locus_tag="VIY07_18765"
     CDS             1419..1955
                     /locus_tag="VIY07_18765"
                     /inference="COORDINATES: protein motif:HMM:NF014664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEY6383836.1"
                     /translation="MARVRLLKEDEAADSAEFIEKVRSGRRGNLLNIYRLLLHSPPLA
                     SAWFDFFNAARWKTKISGRLREIVIIRIAYLNDAQYCLVQHIPALALVDGMTLAECDA
                     LADWRATSLFSESERAALAFTDAMTRDIRVPDDVFADVRRHFDERQIVELSVLIGAYN
                     MHTRVQEALKLDREKPQT"
     gene            complement(2299..>2452)
                     /locus_tag="VIY07_18770"
     CDS             complement(2299..>2452)
                     /locus_tag="VIY07_18770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017275678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HEY6383837.1"
                     /translation="RLHARYRTLTARGKCKQQTITAIGRELLGFIWAIGVHVESHTGS
                     VKPMVA"
BASE COUNT          488 a          734 c          764 g          466 t
ORIGIN      
        1 tatttgaaaa agtatccgga agcggcgccg cgcggcgtat cggccgcgga tgcgattgcg
       61 cagacggtga aatcggtgag gaagcggatc acgctgtacc ggccgcctta tgctggcggc
      121 aagacggggc agattttcga atccgaatgg cgcgaagaag ccaagcttgc cggcctcagt
      181 attcccgacg tgcgcccgct gttcacgcag gaactaaccg atgagatcaa cgccttcgac
      241 aaggcgccga tcatcgccgc ggcgaaggcg tataaggcct agcagtaagg tctctaacga
      301 ttcaggccgc gcgcgaggtt gaggcacatt tcttccagat cggctgcagc cagatgtcgg
      361 ttcgccaccg ctgtgtgcgg catcaggatg acattgccat ccttgtactt aagcagcgaa
      421 tcgtccggct tcgccggttc gctatagccg acatcgagac cgagaccggc gacgcggccg
      481 gaatcaagcg cttcgatcag cgcgtcgcgc tgcacgattt cggcgcgcgc tacgttgacc
      541 agaatggcgc cgggtttgat gtgcgcgatt tcctcgcggc cgatcatgcc gcgcgtcgaa
      601 tcgttcagtg gcacttgcag cacgatgtaa tcggactgcg ccaacagcgt gggcagcgga
      661 acgtaacgcg cggccaacgc cgcttcgtcc gccgccggaa gcgggcgtcg ttggtgatag
      721 aggatattca tctcgaaggc gctggcgcgc gcggcgatct cgcggcctac ttcgcccagg
      781 ccgacaatgc cgagcgctgc gccttgcagt gcgcgcaaat tcggtatgcg cgcgaaatta
      841 gcattgccga tgaagcgccg gtcatagggc cgcagcggat aacctgcctt ggccagcgcg
      901 tccgctgtga cgacgccgga aagatcgttg acgcgcttgc ccaatgcgat catcagcgcg
      961 aaggcttgct ccgccactgc gacgttcacc cggcggcgga cacggtgcac ggcaatgttg
     1021 cgcgctgcgc aagcgcgttc atcgatgttc gcggtgaggt gcccgaattt gtggactacg
     1081 tgcagcttgg gcgcgttctc caaagcttcc gacgtaacga cgaaactttc gacgatggcg
     1141 ccgtcggcat cgcgaagctg catatcgaaa tcggcctgat cttcagcgaa ggtcaccgtg
     1201 gcggggaaca accccgaaag acgttggcgc agcgcgtcgc gccactggat gaaatccaaa
     1261 tcgtgcgcga agaagtccgc caccgcggcc tgatgttccg ccggcgtagc ggggtcgagg
     1321 atgaccggca cggttttgag gaaatgatcc tcctccacta caatgcgcgc cacgaaatcc
     1381 gtcctgcctg caacgggcgc aactcttcgg ggaaattcat ggctcgcgtg aggctattga
     1441 aagaagacga agctgccgac tcggccgagt ttatcgaaaa ggtccgcagc ggccgccgcg
     1501 gcaatctgtt gaatatttac agattgcttt tgcacagtcc accgctggcc tcggcctggt
     1561 tcgatttttt caacgccgcg cgctggaaga cgaagatcag tggccggctg cgcgagatcg
     1621 tcatcatccg catcgcctat ttgaacgacg cgcaatattg cctggtgcag cacatccccg
     1681 cgctggcgct ggtggacggc atgacgcttg cggaatgcga cgcgctggcc gattggcgcg
     1741 ccacgtccct gttcagcgaa agcgaacgcg ccgcgcttgc cttcaccgat gcgatgacgc
     1801 gcgacatcag agtgccggac gatgtgttcg cggatgtgcg gcggcatttc gacgagcggc
     1861 agatcgtgga gctttccgtc ctgatcggcg catacaacat gcatacgcgc gtgcaggaag
     1921 cgctgaagct cgatcgggag aagccacaga cgtgagcatg gcctcggtca ctgtgccggc
     1981 cggcgaaaag gtgccggcgc taggcctcgg tacgtggaag atgagcgatc gcgccaagca
     2041 tgacgctgag ctggcggcgc tgaaactgga agcatctcac aaatgccgaa ggagaatcat
     2101 cgcgcgggcg agatgcagaa agcctgatcc gcaagagatg ccagtgggac gccgccgtca
     2161 tgaggtgccc ccgacgatca gcggcctccg cttccgtcaa ctcatcaatt ttatttattt
     2221 acagtccctt agtcgaggat tctccattcc gtgtgcctct cggctaccac cgtcactgcg
     2281 tgccccgtcg tcagtcggtt aggcgaccat cggtttcacc gacccggtgt gggattccac
     2341 atgaacccca atcgcccaga tgaatcccaa cagctcgcga ccgatggcgg tgatcgtttg
     2401 ctgtttgcat ttccccctgg cggtcaatgt gcgataacgc gcatgcaatc gg
//
LOCUS       DATDHO010000955         2358 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_345365, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000955 DATDHO010000000
VERSION     DATDHO010000955.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2358)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2358)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2358
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345365"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..605)
                     /locus_tag="VIY07_18775"
     CDS             complement(<1..605)
                     /locus_tag="VIY07_18775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T2"
                     /protein_id="HEY6383838.1"
                     /translation="MSRRRWFRLTHCVGAALSFTLIVATALAQERRQGVPGQFDYYVL
                     ALSWSPSYCEARQDRAPHRMPDRQCGGRRPYSFVVHGLWPQYERGFPTYCVVPPPRLN
                     RSIVDSMLDLMPSPRLVFHEWDQHGTCSGLSPRAYFENVRKARERITIPPEYLELDRP
                     IEVMPAEVADAFVRANPGLSRATLSISCDRKWLTEVRICLG"
     gene            complement(733..1188)
                     /locus_tag="VIY07_18780"
     CDS             complement(733..1188)
                     /locus_tag="VIY07_18780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383839.1"
                     /translation="MISGYRWLGSLVVFALVALGAVAPAGAAGWLEKSIYLIGPRYDG
                     VLPPCEAALGTIAHRFAQKEGRFWNSDLQILGFDRVREIAYRPWAPETIPRRFCTAVA
                     AVSDGRNHTVNYSIGEDTGIIGMFWGVEWCVVGLDRNWAYNPACKMARP"
     gene            complement(1293..2048)
                     /locus_tag="VIY07_18785"
     CDS             complement(1293..2048)
                     /locus_tag="VIY07_18785"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEY6383840.1"
                     /translation="MPRYDFRTPRLFVEAPLSEGGEVELDRNQTNYLKNVLRLGRDDG
                     LLLFNGRDGEWRASLTSPGKRTMLATVRTRLRAQPQPEDLHFLFAPLKHARLDYMVQK
                     AVEMGASLLQPVITRHTQVTRINLARMRANVIEAAEQCGVLAVPRVADPLSFDRIAPD
                     SDRLFVFCDESAEVKDPIAALEAMRAAPGTPLAVLIGPEGGFSDDERSALLNHPKVVP
                     IALGPRILRADTAAVAALALVQAALGDWKKPMG"
BASE COUNT          506 a          734 c          684 g          434 t
ORIGIN      
        1 ctcccgagac atatgcgtac ctcggtgagc cattttcgat cgcaggaaat cgatagggtt
       61 gcgcgtgaga ggccggggtt ggctctgaca aacgcatcgg ccacttcggc gggcatgact
      121 tcaatcggcc tgtcgagttc gagatactct ggcgggatgg taatccgctc gcgcgccttt
      181 cgcacatttt cgaaataggc gcgaggtgag agacccgagc aagtcccgtg ctggtcccac
      241 tcgtgaaaaa ccaggcgggg actcggcatc aggtcgagca tgctgtcgac gattgagcgg
      301 ttgagtcgtg gcggcggcac tacgcagtag gttgggaagc cgcgttcata ttgtggccag
      361 agcccatgca ccacgaacga ataagggcgg cggccaccgc attgacggtc cggcattcga
      421 tgcggcgcgc ggtcctgtct ggcttcgcag taagatggcg accacgacag cgcgagcaca
      481 taataatcga attggcctgg cacaccctgc cgacgctcct gtgcgagcgc agtcgcaacg
      541 atcagcgtga agctgagcgc cgccccgaca caatgcgtca gccggaacca acgacgacga
      601 ctcatcgacg catcggcctg acgactgaga acaaatcgga aattgatttc gctcaacggt
      661 tccgttggta aggcaccgaa ctgttagaac agcctaagaa caaaacgggc caaaacgtga
      721 tcgctcatcc gctcatggac gggccatctt gcacgccgga ttgtaggccc agttacggtc
      781 gagtccgacc acgcaccact caacgcccca gaacatcccg atgatgccgg tgtcctcgcc
      841 gatcgaataa ttcactgtgt gattgcgtcc atcgctcact gccgcaaccg cagtacagaa
      901 gcgacgtggg atcgtctctg gtgcccaggg tcggtacgcg atttcccgca cgcggtcgaa
      961 cccaaggatc tgcaggtcgg agttccagaa acgaccctcc ttctgggcaa agcgatgagc
     1021 gatcgtgccc aaagcggctt cacatggcgg caacacaccg tcataccgcg gaccgatcag
     1081 gtagatactt ttttccagcc accccgccgc gccagctggc gcgaccgcgc ccagcgcgac
     1141 caaagcaaaa accacaagcg accctagcca acgatatcca ctgatcatga gaagctcccc
     1201 aagctacgcg ccagcctagc acagctttag ccttgcttgc ttgtatcaca attttctgcc
     1261 gtccgcgcca taggtggacc cgccaaggac tgttatccca tcggcttttt ccaatcgccc
     1321 aatgccgcct gaaccagtgc gagggccgca accgccgcgg tatccgcgcg caggatgcgg
     1381 ggacccaagg caatcggtac cacctttgga tgattgagca gggctgaccg ttcatcatcg
     1441 gaaaaaccgc cctctggacc gatcaaaacg gcaagcgggg tccccggagc ggcacgcatg
     1501 gcttctaaag ccgcgatggg atccttcacc tctgcggatt catcgcaaaa aacaaaaaga
     1561 cgatcgctat cgggcgcgat ccgatcaaac gatagcggat ctgcgacccg gggcaccgcc
     1621 agaacgccac actgctcggc agcctcaatg acgttcgcgc gcatccgggc aagatttatc
     1681 cgtgtgacct gggtatgccg ggtgatcacc ggctgcagga gggatgcgcc catctccacg
     1741 gccttttgca ccatgtaatc gaggcgtgcg tgcttcagcg gggcgaacag gaaatgcagg
     1801 tcctccggct gaggctgcgc gcgaagccgt gttcggaccg tcgcaagcat cgtccgcttt
     1861 ccaggcgagg tgagactcgc ccgccattcg ccgtcacggc cattgaatag cagcagccca
     1921 tcatctcgtc cgagccgcaa tacattcttg agatagttcg tctggttccg gtcaagctca
     1981 acctcgccgc cttcgctgag cggtgcttcg acgaaaagac ggggggtccg aaaatcgtaa
     2041 cgcggcatgg gtcaaactgt agcaggcctc agccggcatc ggtttacgcg ctggagcaag
     2101 gcttcgcgag gcctgtcgcc aaccatcccc aactgccgcc ttcccgacgc attcgggttg
     2161 ttattagctt ctctcagagc ggtataatgg cattgtgcag gaggggtcgg tttcatgagg
     2221 ttgcgccgag caatattgag cctctgcatg gtgccacttg tcgccatggc agcgagggcg
     2281 cagccgcagc cgccgccgca gcagcagccg ccgtcgcaac agcagatgcc gccctgcgtc
     2341 caggagtttt tcaggctg
//
LOCUS       DATDHO010000956         2320 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_488728, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000956 DATDHO010000000
VERSION     DATDHO010000956.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488728"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            240..1067
                     /locus_tag="VIY07_18790"
     CDS             240..1067
                     /locus_tag="VIY07_18790"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEY6383841.1"
                     /translation="MKEVYPFQSSDDERKRLIAQGELVAPLTRRLFERAGITAGMRVL
                     DIGSGSGDVALLAAELVGPTGDVTGIDRDPAQVAYAEQRAKTRGLANVHFVVGDFREI
                     DFTPAVDAIVGRLVLMYAANPLDAIRRALRNLRSGGIIALQESIIDYEGPVFIEPLDC
                     LAAKAAEWFRAGFKHAGVHSRMGMRLFGLMRQAGLAPSTEIDMVVPIQQGPDGALFST
                     LASVVRSQIPAIVASGVATEAEIDIDTLEERMIANAPADGVLGYFNLGHVGVWAAKP"
     gene            1214..>2320
                     /locus_tag="VIY07_18795"
     CDS             1214..>2320
                     /locus_tag="VIY07_18795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012605198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEY6383842.1"
                     /translation="MAGLVERVTYHNEENGFCVLRIKARGHRELVTVIGHAAVISAGE
                     WITASGEWINDRTHGQQYKAKYLKTTEPTSLDGIEKYLGSGMIRGIGPVYAKKLVRAF
                     GEKVFDTIAAQPERLREVTGIGPVRASRITAAWAEQKIVREIMVFLHSNGVGTARAVR
                     IYKTYGSDAVQVMSENPYRLARDIRGIGFKTADTIAMKLGIEKTAMIRVRAGISYALT
                     EAMNEGHCGLPTEQLVPLAEKLLEVPVELVRTALDLELTEGTVIADSVGETPCVFLAA
                     LHRAERAIAERLLRLANGTLPWPWIDPNKALPWVEERIGLALAASQVAAIRLALRSKV
                     LVMTGGPGVGKTTIVRAILRILAAKGVRLLLCAPT"
BASE COUNT          494 a          622 c          711 g          493 t
ORIGIN      
        1 agacatgacc ttgtgcggaa atccgctttc gcggtcgttg tcggggttaa agcggacatg
       61 ccttattgcg tcgcatatgt ctgcttttga cccaaagcgg acatgacgat tgcactgcga
      121 aatttccgct aacgacccaa agcggacatc ggctgctgtc agctccggcc cttccaaggt
      181 gtttgcttta agtcgctacg atgccttgcc ctgagcacct ggaagagcaa caagacagaa
      241 tgaaagaagt ctatccattt cagagttcgg acgacgaacg gaaaaggctt atcgctcaag
      301 gcgaattggt ggccccgttg acacggcggc tgtttgagag agccggcatc acggccggga
      361 tgcgtgttct ggacattggt tcaggatcgg gcgatgtcgc gttactggcg gccgaattgg
      421 tggggccaac gggtgatgtc accggcattg atcgcgatcc cgctcaagtc gcatacgccg
      481 agcaacgtgc taagacgcgt ggcctcgcaa acgttcactt tgtggtgggc gattttcggg
      541 aaattgactt cactccggcc gtggatgcaa ttgttggacg actcgttctt atgtacgcgg
      601 caaatccact cgacgcgata cgacgcgcac ttcgaaatct tagatcgggc gggataattg
      661 cgctccaaga gtcaatcatc gattatgaag gcccggtatt catcgaaccg ctggattgtt
      721 tagccgctaa ggctgctgag tggttccgag ccggattcaa acacgcaggc gttcattcac
      781 gaatgggtat gcgattattt ggattgatgc gccaagctgg tctggctcct tcaactgaaa
      841 tcgatatggt ggttcccatt cagcaggggc cggatggcgc gctctttagc acgcttgctt
      901 ccgtggtccg atctcagatc ccggctattg tagcgagtgg agtagccaca gaagctgaaa
      961 tcgatatcga tacgctggag gaaagaatga ttgccaatgc gccagctgat ggcgttctag
     1021 gctatttcaa tttaggacat gtcggcgttt gggcggcgaa gccctaacgg cgtcccgctt
     1081 ttggccctta gcggacatgc ccaaaaacgc aaacaggcct gcacgggggt gggggcaatt
     1141 tccggatacg ttttagccga cgggccggca aagcattggg cgaccgcagg cagaatcacc
     1201 cacccaagaa gttctggccg gcctcgtcga acgcgtcacc taccacaatg aagagaacgg
     1261 gttctgcgtt ctgcgaatca aggcgcgcgg ccaccgtgaa ctggtcacgg tgatcgggca
     1321 cgccgcggtg atttccgccg gcgagtggat cactgcatcg ggcgaatgga tcaacgaccg
     1381 tacccatggt cagcagtaca aggcgaagta tttaaagacc acggagccga cttcgcttga
     1441 cggcatcgag aaatacctcg gctccgggat gattcgagga atcgggccgg tttacgccaa
     1501 gaagctggtg cgcgcttttg gcgagaaggt gtttgatacg attgcggcgc agcccgaacg
     1561 cctacgcgag gtaacaggca ttggtccggt gcgagccagc cgtatcactg ccgcctgggc
     1621 cgagcagaag atcgttcgcg aaatcatggt cttccttcac agcaatggcg tcggcacggc
     1681 gcgagcggtg cgcatttaca agacctacgg ctcggacgcc gtgcaggtca tgtcggaaaa
     1741 cccatatcgc ctcgcgcgtg acatccgcgg cattggtttc aaaaccgccg acacgatcgc
     1801 gatgaaactc ggcattgaga agaccgcgat gatccgggtt cgcgccggaa tttcctatgc
     1861 gctaaccgaa gccatgaacg aagggcattg cggcttgccg acggaacagc tggtgccgct
     1921 tgcggagaag ctgctcgagg tcccggtaga actagttcgc actgcgcttg atctcgaact
     1981 gacagagggc acggttatcg cagatagtgt cggcgaaacc ccttgtgtat ttctggcggc
     2041 tctgcatcgg gcggaacgcg cgattgccga gcggctgttg cggcttgcga atggtacgct
     2101 cccttggccc tggatcgatc caaacaaggc attgccgtgg gtcgaggaac gcatcgggct
     2161 tgcccttgcg gcaagccagg tagccgcgat ccggcttgca ctgaggtcca aggtgttggt
     2221 catgaccggt ggtcccggcg tcggcaagac cactatcgtc agggcgattc ttcgcattct
     2281 ggcggcaaaa ggggtgaggc tcttgctatg cgcgccaacc
//
LOCUS       DATDHO010000957         2664 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_147120, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000957 DATDHO010000000
VERSION     DATDHO010000957.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2664
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147120"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..893)
                     /gene="tal"
                     /locus_tag="VIY07_18800"
     CDS             complement(<1..893)
                     /gene="tal"
                     /locus_tag="VIY07_18800"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011930959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEY6383843.1"
                     /translation="MKATQLLHNLGQSIWLDNITRDLLTSGTLKRYIDELSVTGLTSN
                     PTIFDHAIKNSSAYDAAIRADLAKGKSGEALFFDLALEDLTQAADLFRPIYDQTNGVD
                     GWVSLEVSPLLAYDTKSTLAAAKELHARAGRPNLFIKIPGTKEGLPAIEEAIFAGVPI
                     NVTLLFSREHYVAAAEAFLRGIERRIDAGLKPDIGSVASLFISRWDVAVMGKVPDALR
                     DKLGIAIANRAYKASRDLLGSPRWQRAYNAGARPQRLLWASTGTKDPKASDVLYVKAL
                     AAPYTVNTMPEGTLKALADHG"
     gene            complement(914..1600)
                     /locus_tag="VIY07_18805"
     CDS             complement(914..1600)
                     /locus_tag="VIY07_18805"
                     /inference="COORDINATES: protein motif:HMM:NF012905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEY6383844.1"
                     /translation="MTLPKSIVFLVDVDNTLLDNDRIQDDIKRHLDREFGIPCRERYW
                     TILEQLFTELGYRDYLGALQRYRVEHPQDIHLLSMSSFLVDYPFANRLYPGSMDVLEQ
                     FRAWGQTVILSDGDVVFQPRKVERSGIFEAVEGHVLIYIHKEQSLSDVERRYPAEHYV
                     LVDDKPRILGAVKKVWGSRVTTVFPRQGQYAHDAKVIAACPRADLTVERISGLLDYDL
                     PALLAGKESI"
     gene            complement(1677..>2664)
                     /locus_tag="VIY07_18810"
     CDS             complement(1677..>2664)
                     /locus_tag="VIY07_18810"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187429.1"
                     /note="catalyzes the interconversion of alpha-D-glucose
                     1-phosphate to alpha-D-glucose 6-phosphate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphoglucomutase, alpha-D-glucose
                     phosphate-specific"
                     /protein_id="HEY6383845.1"
                     /translation="DMDAIRAAGLKLGVDPLGGAAVHYWEPINEIYKLDIVVVNPKVD
                     PTFSFMTVDHDGKIRMDCSSPYAMARLVGLKDQYRVAFANDPDSDRHGIVTPSVGLMN
                     PNHYLAVAIRYLLTHRPRWPAHVAVGKTLVSSGMIDRVVNKLGRQLCEVPVGFKWFVP
                     GLFDGSFCFGGEESAGASFLRQDGTVWATDKDGPIMDLLAAEITARTGKDPGQHYHDL
                     TAEFGTPYYTRIDASATPEQKARLEKLSPEAVEAATLAGEPITAKLTRAPGNGADIGG
                     LKVVAANGWFAARPSGTEDIYKIYGESFKDESHLKGIVSEAEEIVNKALAGG"
BASE COUNT          553 a          773 c          759 g          579 t
ORIGIN      
        1 tcgccgtgat cggcgagggc ctttaaagtg ccctcgggca ttgtgttgac cgtgtaaggc
       61 gcagcaagag ccttgacgta cagcacgtcg gaagctttgg gatccttggt tcccgtgctg
      121 gcccatagta ggcgctgagg acgggcaccg gcattgtagg cacgctgcca gcgcggcgag
      181 ccgagcaggt cgcgagacgc tttgtaggcg cggttagcga tggcgatacc gagcttatcg
      241 cgcagcgcgt cggggacttt gcccatgacc gcaacgtccc aacggctgat gaacagcgag
      301 gctacggaac cgatatcggg cttgagcccg gcgtcgatcc ggcgctcgat tccgcgcaag
      361 aacgcttcgg cggcagcgac gtagtgctcg cgcgagaaca aaagagtcac gttgatcggc
      421 accccagcaa agatcgcttc ttcaatggcg gggagcccct ctttggtgcc ggggatcttg
      481 ataaataagt ttggccgccc tgcccgggca tgcagttctt tggccgcggc gagagtgctt
      541 ttcgtgtcgt aagcgagcaa gggagatacc tccagcgata cccatccgtc cacgccgttg
      601 gtctggtcgt aaataggtcg aaacagatcg gcggcctggg taagatcctc cagcgcaaga
      661 tcgaaaaaaa gcgcctcgcc agattttcct tttgctagat ccgcgcgaat cgcagcatcg
      721 taagcgctgc tgttcttgat agcgtgatcg aagatcgtcg gattcgaggt cagccccgtc
      781 accgacaatt cgtcgatgta gcgcttgagc gtgccgctag tgagtagatc gcgcgtgatg
      841 ttatcgagcc agatgctctg gcccaggttg tgcagtaatt gggtggcttt catggtttca
      901 cctccataca gatttatatc gattctttgc ccgccagtag agcgggtaag tcataatcca
      961 gcagaccgct gatgcgctcc accgtcaggt ccgcgcgggg acacgccgcg ataacttttg
     1021 cgtcatgggc atattgacct tggcgcggaa agacggtggt tacgcggcta ccccagactt
     1081 ttttgaccgc ccccaggata cgtggtttgt cgtccaccag gacgtaatgc tcggccggat
     1141 aacggcgctc cacgtcgctc agcgattgct ctttgtgaat gtagatgagt acatgccctt
     1201 ccaccgcttc gaagatgccg gagcgttcca ccttgcgcgg ttgaaacacc acgtcgccgt
     1261 ccgacaggat gaccgtctgt ccccacgcgc gaaattgttc cagcacgtcc atcgatccgg
     1321 gatagagacg gttagcgaac ggatagtcca ccaagaatga cgacatcgag agcaggtgaa
     1381 tatcttgagg atgctcaacc cggtaacgct gcagagcgcc gaggtagtcg cgataaccca
     1441 gttcggtgaa caactgttcg agaatcgtcc agtatcgctc gcggcacgga attccgaatt
     1501 cacgatcgag gtggcgttta atgtcgtcct ggatccggtc gttgtcgagc aacgtattat
     1561 cgacatcgac cagaaaaacg atggatttag gcagcgtcat aagttaggct cgaggattga
     1621 gaatagagga tcgatgatcg ccatcttcga ttcctccatc ttcgatcctt tatcatttaa
     1681 ccgcctgcca atgctttgtt cacaatctcc tcggcctcgc tcacaatccc cttcaggtgc
     1741 gattcgtcct tgaagctttc tccgtaaatc ttataaatgt cttccgtgcc cgagggccga
     1801 gcggcgaacc agccgttggc cgccactact ttcagtccgc caatatccgc cccattgccc
     1861 ggggcgcgag taagcttcgc cgtgatcggc tcaccggcga gcgttgctgc ctcaaccgcc
     1921 tccggtgaaa gtttttccag tcgcgccttc tgctcgggtg tcgctgacgc gtcgatgcgc
     1981 gtatagtacg gtgtgccgaa ctcggccgtg agatcatgat aatgctggcc cggatccttt
     2041 cccgttcggg cggtgatctc ggccgccaac aaatccataa taggcccgtc cttgtcagtg
     2101 gcccaaacgg tgccgtcttg ccgcagaaag cttgctccgg cgctctcctc gccgccaaaa
     2161 caaaacgaac catcgaaaag tcctggcacg aaccatttga acccaaccgg cacctcgcac
     2221 aactgccggc caagcttgtt caccacccga tcgatcatgc cgctgctgac caaagttttg
     2281 ccaacggcga cgtgagcagg ccatcgcggc cgatgggtaa gtagataacg gatggccact
     2341 gcgagataat gattggggtt cattaacccg accgatggcg tgacgatccc gtgccgatcc
     2401 gaatccggat cgttggcgaa ggcaacgcgg tattgatcct tcaggcccac gagccgggcc
     2461 atggcgtagg ggctcgaaca gtccatccgg atctttccgt cgtgatccac cgtcatgaac
     2521 gaaaaagtcg gatcaacctt tgggttcacg accacgatat cgagcttata gatttcgttg
     2581 atcggttccc aataatgcac ggcggcgccg cctagcgggt cgacgcctag cttgagaccc
     2641 gcggcgcgga tggcatccat gtcg
//
LOCUS       DATDHO010000958         1644 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_244187, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000958 DATDHO010000000
VERSION     DATDHO010000958.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1644)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1644)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244187"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VIY07_18815"
     CDS             complement(<1..184)
                     /locus_tag="VIY07_18815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010970222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY6383846.1"
                     /translation="MTKTYQGSCHCGAVRFEADIDLAAGTFRCNCSICFKTRAWLASV
                     PAEAFRLLAGEQGLTEY"
     gene            complement(181..546)
                     /locus_tag="VIY07_18820"
     CDS             complement(181..546)
                     /locus_tag="VIY07_18820"
                     /inference="COORDINATES: protein motif:HMM:NF013098.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6383847.1"
                     /translation="MGNPVVHWELMSKDPAKVSDFYAKIFGWTVKHMPELNYRTVDTG
                     GEGGINGGIFRPEREGPWPGNLVFYIAVDDLPAFRKKIVAAGGKIHVEEQEVPGMGTL
                     SLFTDPEGRMMGLWKAKSQ"
     gene            complement(617..1015)
                     /locus_tag="VIY07_18825"
     CDS             complement(617..1015)
                     /locus_tag="VIY07_18825"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEY6383848.1"
                     /translation="MKYVCLGYIEPGKFENMPDNERNAEIDACFGYDDVLRKNGHFAG
                     GEGLQPPGNAVTLRLRGGKVSVTDGPYAETKEQLGGILILEANDLNHAIQLMSKHPGV
                     RMGPFEIRPAADLSGMIRESELRRRSKSKA"
     gene            complement(1012..1371)
                     /locus_tag="VIY07_18830"
     CDS             complement(1012..1371)
                     /locus_tag="VIY07_18830"
                     /inference="COORDINATES: protein motif:HMM:NF015735.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEY6383849.1"
                     /translation="MRYLLLCCFDEMRWNALPDAQRGQIMHEYGDLLRTLDQSGQHLA
                     TGKLQSTSAAATVRARNGKATVTDGPFAETKEQLGGYHLVECASRDEAIAIAKRIPTI
                     PFGGAVEVRALESQETA"
     gene            complement(1381..>1644)
                     /locus_tag="VIY07_18835"
     CDS             complement(1381..>1644)
                     /locus_tag="VIY07_18835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HEY6383850.1"
                     /translation="HGAIEFRECVADDVKPGKRTSFPQSVKLKRGETVFFSYIVYKSR
                     KDRDRVNAKVMKDPRIKAMGDFKDMPFDVKRMIYGGFKVFVDA"
BASE COUNT          262 a          531 c          508 g          343 t
ORIGIN      
        1 ggtactcggt aaggccttgc tcccccgcca gcaaccggaa agcttccgcc gggacggacg
       61 ccagccaggc gcgcgtcttg aagcagatgg agcagttgca cctgaaggtg cccgcagcga
      121 gatcgatgtc cgcttcgaag cgcactgcgc cgcagtggca gctgccctga taggtctttg
      181 tcattggctt tttgctttcc acaatcccat catgcggccc tcggggtccg tgaagagcga
      241 caacgtcccc atgccgggga cttcctgctc ctcgacgtgg atctttccgc cagccgcgac
      301 gatcttcttg cgaaaggccg ggaggtcatc gacggctatg tagaagacca ggttgccggg
      361 ccacggccct tcgcgctccg gccggaagat gccgccgttg atcccgcctt cgccgccggt
      421 gtcgaccgtg cggtagttga gctccggcat gtgcttcact gtccagccga agatcttcgc
      481 gtagaaatcc gacaccttcg ccggatcctt ggacatcaat tcccagtgaa caacggggtt
      541 acccatataa gtgtctcctt gaagaggcgt gattcgtgat tcgtgggtcg tgattcgact
      601 ccaacccggg ctccccttac gccttgctct tcgagcgccg ccgcagctcg ctctcgcgga
      661 tcatcccgga caggtcggct gccgggcgga tctcgaaagg ccccatgcgg actcccgggt
      721 gcttcgacat cagctggatg gcgtggttga gatcgttcgc ctccagaatc aggatgccgc
      781 cgagctgctc cttggtctcg gcatagggcc cgtcggtcac cgagaccttg ccaccgcgga
      841 ggcgcagcgt caccgcgttg cccggcggct gcaatccctc gccgccggcg aagtgcccgt
      901 tcttgcgcag cacgtcgtcg tagccgaagc aggcgtcgat ctcggcgttg cgctcgttgt
      961 ccggcatatt ctcgaacttg cccggctcga tgtatccaag gcacacgtat ttcatgctgt
     1021 ctcctgtgac tcaagcgcgc gcacttcgac cgcgccgccg aagggaatgg tggggatgcg
     1081 cttcgcgatc gcaatcgcct cgtcgcggct tgcgcactcg acgagatggt agccgccgag
     1141 ctgctccttg gtttcggcga agggtccgtc ggtgacggtc gccttgccgt tgcgcgcgcg
     1201 caccgtggca gcggccgacg tcgattgcag cttgccggtt gccaggtgtt gaccgctctg
     1261 gtccagggtt cgcagcaggt ccccgtactc gtgcatgatc tggccgcgct gcgcatccgg
     1321 cagcgcattc cagcgcatct cgtcgaagca gcacagcagg aggtatcgca tggctctctc
     1381 ctaggcgtcg acgaagacct tgaacccgcc gtagatcatg cgcttcacgt cgaacggcat
     1441 gtccttgaag tcgcccatgg ccttgatgcg cggatccttc atcaccttgg cgttgacgcg
     1501 gtcgcgatct tttcgggact tgtagacgat gtaggagaag aaaacggttt cgccgcgctt
     1561 gagcttgacg ctttgcggaa aagacgtgcg cttgccgggc ttcacgtcgt cggcgacgca
     1621 ctcgcggaac tcgatcgcgc cgtg
//
LOCUS       DATDHO010000959         2989 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_244238, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000959 DATDHO010000000
VERSION     DATDHO010000959.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2989)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2989)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2989
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244238"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VIY07_18840"
     CDS             complement(<1..329)
                     /locus_tag="VIY07_18840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018857687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HEY6383851.1"
                     /translation="MKFGEAVASGLRNYFNFSGRASRSEFWFFALFCALVVNIGSVGD
                     LFFFNALAQQGLGPIYVVSNLALFVPGLAVSARRLHDIDRTGWWILITLTVIGNIWLI
                     IWWCTKGT"
     gene            complement(630..1358)
                     /locus_tag="VIY07_18845"
     CDS             complement(630..1358)
                     /locus_tag="VIY07_18845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEY6383852.1"
                     /translation="MAAEVAKGAASHTSFAGRIRNYFLTGLVVAGPLAITVWLIWSIV
                     TWVDDIVRPLIPPAYRPESYMPWKIPGTGLIIAFVVLTLLGFLTANLVGRTLVELGES
                     LLSRMPIVRPIYKTMKQIFESLFSKSGSSFRKVGLVEFPSPGMWSLVFLSQSPGGDVA
                     RKLPQGEHVSVFMPCTPNPTTGFFFYVKRADIIELDISVENAMTLLISAGMVQPNGDA
                     QKKLAALAATAQAARVNRKPEAVE"
     gene            complement(1401..>2989)
                     /gene="glmS"
                     /locus_tag="VIY07_18850"
     CDS             complement(1401..>2989)
                     /gene="glmS"
                     /locus_tag="VIY07_18850"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEY6383853.1"
                     /translation="TEDNAHPHATEAVAVVHNGIIENFRELREQLTRRGRKFVSDTDT
                     EAVAHLVSEEMKNGRSPTDAVAAALKQLRGAFALAFLFTGKDDLLIGARKGSPLAIGY
                     GKGEMYLGSDAIALAPFTDTVSYLEDGDWAVLTRKGVQIHDEQDRKVERPIMKSTASA
                     QLVDKGNHKHFMAKEIHEQPEVVGHTLAHYIDMVNERVALPEKLPFEWKNLKRLSISA
                     CGTAFYAGLVAKYWFERFAKLPVEIDIASEFRYRGAPLEPGDLALFVSQSGETADTLA
                     TLRYAREKKQHILSVVNVPTSTIARESDVVMPTLAGPEIGVASTKAFTCQLSALACLA
                     IAAGRARGDLSETDEQNLVRALIEVPRLMAAALALEPQIEKLAQNLAKARDVLYLGRG
                     TSFPIALEGALKLKEISYIHAEGYAAGELKHGPIALIDETMPVIVIAPYDRVFEKTVS
                     NMQEVAARGGKIILVTDPQGAREATVESLETLSLPDMASTVTPLVYAIPVQLIAYHTA
                     AAIGTDVDQPRNLAKSVTVE"
BASE COUNT          630 a          882 c          864 g          613 t
ORIGIN      
        1 gttcctttgg tgcaccacca aatgatcaac cagatgttcc cgataacggt gagcgtgatc
       61 agaatccacc aaccggttcg atcgatgtca tgaagacgcc gcgccgaaac ggcgagccca
      121 ggcacaaaca aagccagatt actgactacg tagatcggac caagtccttg ttgagctaaa
      181 gcattgaaga aaaaaagatc tccgactgac ccgatattga caacgagggc acaaaacagc
      241 gcaaaaaacc agaactcgga gcgcgatgcc cgtcctgaga aattgaagta gttgcgtaac
      301 ccagaagcga ctgcctcgcc gaatttcatt gcgctaccct aagtgattaa ttgagggcga
      361 cttacccgca acggcagcgc ggtggaaagt tcaaacactc ctattccaca acattagttt
      421 ttggcttatt gcgcgccgcg ctttgctgaa agcgcgggga gacttcagtt tctatgcttc
      481 gctgtgttgt catggccggg cttgtcccgg ccatccacgt cttgctttac tcacctgttc
      541 gaaagacgtg gatgcccggc acataggcgt gcgaaagcac gccgtccgtt ggacggctat
      601 ggccgggcat gacggctgag tggcgaaagc tactcgaccg cttccggttt gcgattaacc
      661 cgagccgcct gtgccgttgc tgcgagtgcg gccagttttt tctgcgcatc gccgttcggc
      721 tggaccatgc cggctgaaat caaaagcgtc atggcattct cgaccgagat gtcgagctcg
      781 ataatgtccg cgcgcttcac atagaagaag aatccggtcg tcgggttcgg cgtgcagggc
      841 atgaacaccg agacgtgttc cccttgcggc aatttcctgg cgacatcgcc gcccggcgac
      901 tgcgacagaa aaaccagcga ccacatcccc ggtgagggaa actccaccag gccaaccttg
      961 cggaaacttg aaccggactt ggaaaacagc gactcgaaga tctgcttcat cgttttgtag
     1021 atcggccgga caatgggcat ccggctcaga aggctttcgc caagttcgac aagggtccgc
     1081 ccgaccaggt tggcggtcaa aaagccaagc agcgtcagca cgacaaaagc gatgatcagc
     1141 cccgtgcctg gaattttcca aggcatatag ctctcgggcc gatacgccgg cgggatgagc
     1201 gggcgcacga tgtcgtcgac ccaggtgacg atcgaccaga tcagccagac ggtgattgcc
     1261 aagggtccgg cgaccaccaa tccagtcaga aaataattcc ggatgcggcc agcgaagctt
     1321 gtgtgcgatg cggccccttt cgccacctcc gccgccattg cgtcgcccgg tttcaagtcg
     1381 atgtcgttca tgaacgaagt ttattccacc gtgaccgatt tcgcgagatt gcggggctga
     1441 tcgacatccg tgccgattgc cgcagcggta tgatatgcaa tcaattggac cggaatggcg
     1501 tagacgagcg gcgtcaccgt tgaagccatg tcgggcagcg agagcgtctc gagtgactcg
     1561 accgttgcct ccctggcacc ttgcggatcg gtgaccagga tgatcttgcc cccgcgggcg
     1621 gctacttcct gcatgttcga aacggttttt tcgaacacgc gatcgtacgg cgcgatgacg
     1681 atgaccggca tggtctcgtc gatcaatgcg atcggcccat gcttgagttc gcccgccgcg
     1741 tagccttcgg catggatgta cgaaatctct ttgagcttga gggcaccttc caaagcgatc
     1801 ggaaaactcg tgccgcggcc gaggtagagc acgtcgcgcg ccttggcgag attttgcgcc
     1861 agcttctcga tctgcggctc aagcgcaaga gccgccgcca ttaaccgcgg cacctcgatc
     1921 aaagcgcgca ccagattttg ttcgtctgtc tccgacaaat cgccgcgcgc acgcccggcg
     1981 gcaatcgcga ggcacgcaag tgcgctgagc tgacaggtaa aagccttggt ggaagctacc
     2041 ccgatctcag gcccggcaag cgtcggcatg accacatcgc tttcgcgggc gatcgtcgat
     2101 gtcggcacat tgaccacgga aagaatgtgc tgcttcttct cccgcgcgta gcgcaaggtg
     2161 gccagcgtgt cggcggtttc gcccgactgg gagacgaaaa gtgcaaggtc tccgggttcg
     2221 agcggcgccc cgcggtagcg gaattccgac gcgatatcga tctcgaccgg caatttcgcg
     2281 aaacgctcga accagtattt tgcgaccagc cctgcataga aggcggtccc gcaggccgag
     2341 atcgacagcc gcttgaggtt cttccattca aaaggaagct tctccggcaa ggcgacccgc
     2401 tcgttcacca tgtcgatgta atgagcaagg gtgtggccga cgacctcggg ctgctcatgg
     2461 atttcctttg ccatgaagtg cttgtggttg cccttgtcaa caagttgtgc cgaggcggtg
     2521 gatttcatga tcggccgctc caccttgcgg tcttgctcgt cgtggatctg aacgcccttc
     2581 cgcgtcagca ccgcccagtc gccatcctcg agatagctga cggtgtcggt gaatggcgca
     2641 agcgcgatgg cgtcggaccc caaatacatt tcgcccttgc catagccgat ggccaagggc
     2701 gaacccttgc gtgctccgat caaaaggtcg tctttgccgg taaacagaaa ggccagagcg
     2761 aaggcgccgc gcaattgctt gagcgcggca gcgaccgcgt cggttggcga tcttccgttc
     2821 ttcatttcct cggagacgag atgcgccacg gcctcagtgt cggtatcgct gacgaatttc
     2881 ctgccgcgcc tcgtcagttg ctcgcgcagt tcgcgaaaat tttcgatgat gccattgtga
     2941 accaccgcca cggcttcggt cgcgtgcggg tgcgcattat cctccgtcg
//
LOCUS       DATDHO010000960         1866 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_147209, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000960 DATDHO010000000
VERSION     DATDHO010000960.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1866
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_147209"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1817)
                     /locus_tag="VIY07_18855"
     CDS             complement(<1..1817)
                     /locus_tag="VIY07_18855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="negative regulator of septation ring formation"
                     /protein_id="HEY6383854.1"
                     /translation="MADAIGVRIGELDQRLGARALEVANNLDSRIGRFEDLLVGRAET
                     VTSQIETRSKAAADALNARLEQLSQAIKVNSAEAERSLGQLALSTTEAIRASAGDAER
                     TLVGVSEEVARNFVGKADEIAKAVSRRTNEMTTLLSEKSGGVLAALTGKGEQFTREVT
                     SATDQAVKAIEEKGFAFTRSMMDNSSEMARMINVAGEAATSTVSRTLNELNEVTQKAI
                     THSKETATSTVKEMLETHTMLRADTTAMFERLREANIMLQEVLSGAHENMSALENTLM
                     VRVSEFVGAMKEITASTGDATGRVETNIANFRDLMAQIIGDLGNLARQFDVHGHELAK
                     AVEMIGHSNQRTEASVNERRVQLDSLVATLDIRTEDLEQRLSRFSGLLDESLEAASAR
                     AREVARVVSEASAEGMRAISEQYERVRESAEEESQRSSEALRAIYAQTAGDTQSHFRD
                     ANERFAETVQSMKQMAAEMHRELESTRSELRRGVFELPQEAAESASQMRRVIVDQIEA
                     LAELNRIVARHGRNLDAVEPVRRTREESTLAIVGSRNDVTARSDAPPRNEAPARDEGP
                     PRGETPSRSEAPSRPAQRPESSGFPLRRNADTPSLTPAPA"
BASE COUNT          292 a          578 c          579 g          417 t
ORIGIN      
        1 gctggagcag gggtgaggga gggcgtatcc gcgttccggc gcagcggaaa accgcttgat
       61 tcggggcgtt gcgcgggacg cgacggcgct tcactgcgcg aaggagtttc gccgcgaggt
      121 ggcccttcgt cgcgcgcagg ggcttcattg cgcggaggcg catcgctgcg ggccgtaacg
      181 tcattgcggc tgccgacgat agcgagcgtg gactcctcac gtgtccggcg cacgggctcg
      241 accgcatcga gatttcgccc atggcgggcg acaatacggt taagttcggc caatgcctcg
      301 atctggtcca cgatgactcg acgcatctgc gaagcgcttt cagccgcttc ttgcggcagt
      361 tcgaataccc cgcgccgcag ttcgctgcgc gtggattcaa gttcgcgatg catttcggcg
      421 gccatctgct tcatgctttg cacggtttcg gcaaagcgct cattcgcgtc gcggaaatgc
      481 gactgagtgt cgccggcggt ttgcgcgtaa atcgcccgca aggcttcgga tgagcgctgg
      541 ctttcttctt cggcactctc acgcactcgt tcgtattgct cgctgattgc gcgcatcccc
      601 tctgcgctgg cttccgacac cacgcgcgca acttcgcgtg cgcgtgcgga cgcagcctcg
      661 agcgactcgt cgagcaggcc ggagaaacgg cttagccgct gctcgagatc ctcagtacgg
      721 atatcgagag tggcgacgag ggaatcaagc tgaacacgac gttcattgac gctggcttca
      781 gtgcgctgat tgctgtggcc gatcatttcg accgccttgg ccaattcgtg gccgtgaaca
      841 tcgaattgac gcgcaaggtt gccgaggtcg ccaatgatct gggccatgag atcgcggaaa
      901 ttggcgatgt tcgtctccac gcggcctgtg gcatcgccgg tcgatgccgt gatctctttc
      961 atggcgccga caaactcgga aacccgcacc atcagcgtgt tttccaacgc actcatgttc
     1021 tcgtgcgcgc cgctgagcac ttcctgcagc atgatgttgg cttcgcgcag ccgctcgaac
     1081 atggcggttg tatcggcgcg cagcatcgtg tgcgtttcga gcatttcctt gaccgtcgat
     1141 gtcgcggtct ccttggaatg cgtgatcgct ttctgcgtga cttcgttgag ctcgttcaac
     1201 gtgcgggata ccgtgctggt agcagcttca cccgcgacat tgatcatgcg ggccatctcg
     1261 ctgctgttat ccatcatgct gcgcgtaaag gcgaagccct tctcttcaat cgccttcacc
     1321 gcctgatcgg ttgcgctggt cacttcgcgc gtaaactgct cgcctttccc ggtgagcgca
     1381 gcgaggacac cgccgctttt ttccgacaga agggtggtca tttcgttggt acggcggctg
     1441 acggctttgg cgatctcgtc ggccttgccg acgaagttgc gggcgacctc ttcgctcacc
     1501 ccgaccaaag tacgttctgc atcgccggcg ctggcgcgaa ttgcctcggt ggttgaaagc
     1561 gcaagctggc cgagcgagcg ctccgcctcg gcagaattga ccttgatggc ctggctcagc
     1621 tgttccagcc gggcattgag cgcatcggcg gctgccttgc tgcgtgtctc gatttggctg
     1681 gtgactgttt ccgcgcgacc gaccaacagg tcctcaaacc ggccgatgcg gctgtcgaga
     1741 ttgttggcga cctcgagagc gcgtgcgccc aaccgctggt ccagctcgcc gatcctgacg
     1801 ccgatcgcgt cggccacctc ggttcctcgt gaatcgattg tgccggctac ctcgccaatg
     1861 cgctga
//
LOCUS       DATDHO010000961         2176 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_488941, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000961 DATDHO010000000
VERSION     DATDHO010000961.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2176)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2176)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2176
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_488941"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..1527)
                     /locus_tag="VIY07_18860"
     CDS             complement(37..1527)
                     /locus_tag="VIY07_18860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEY6383855.1"
                     /translation="MTTAVSPQAASAQAVVLPKNRGAYYGGGWHDPKAGRYADTINPG
                     TGQSLGKVAETGADDIDAAVASAKAAFNEWRRVLPLERAKILRRIAEILRQNANELAM
                     IDAADCGNPVKEMVSDAMIAAVQVEFFAGFVTEMKGASIPMGPDVVNFSVREPLGVVG
                     RIIPFNHPFMFCAGKSAAPLAAGNTVVVKPPEQAPLSSLRLAELIGGLLPAGVFNVVP
                     GGREAGQRLASHPDVAMIALIGSVPTGRAVMKAASDTVKRTMLELGGKNALIAFADAD
                     PDDVAAAVIGGMNFTWCGQSCGSTSRAFIHEKIYDAVVARVKEKIKYYKPGIPTDPAT
                     TMGAIVSKQQFDRVMSFIDSAKSEGARLITGGGPPSDPALKNGYYIEPTVFAVTEKNR
                     IAREEIFGPVLGIFKWHDEAKMLETVNAVEYGLTASIWTNDLNQAHRMAMAVNVGYVW
                     INEVSKHFLGAPFGGFKQSGLGREECFEEMLSFTQEKNIHVKLKPA"
     gene            complement(1549..>2176)
                     /locus_tag="VIY07_18865"
     CDS             complement(1549..>2176)
                     /locus_tag="VIY07_18865"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383856.1"
                     /translation="ADYWYAKNPSIKTLKDTNGHTIAYSTNGSSTHSVVRAFLDEFKL
                     TAKPQATGNPSATLTAVMTDQVDVGWASPPFGLKEMEEGKIHLVARATDATLVRGQTI
                     RVLVANADVLAKRKDVIERFMKAYRESIDYMYSSTPQVVADYAEFARVPEPMAKRVRD
                     EFFPKGLVNPDQIHGMDSLMSEAVNLKFIPAPLSKEQTAELIQIFPRR"
BASE COUNT          399 a          657 c          645 g          475 t
ORIGIN      
        1 gtcttgccgc cttgctgcat tgcgaaagtg ccaggtttat gccggcttga gcttcacgtg
       61 gatgttcttt tcctgcgtga aggaaagcat ctcctcgaag cattcctcac ggccgagccc
      121 tgattgcttg aagccgccaa atggcgcgcc taggaaatgc ttgctgactt cattgatcca
      181 cacgtagccg acgttcaccg ccatggccat gcggtgcgcc tggttcagat cgttggtcca
      241 gatggaagct gtgaggccat attcgaccgc gttgaccgtt tcgagcatct tcgcttcatc
      301 gtgccacttg aagatgccaa gcactggccc gaagatttcc tcgcgtgcga tgcggttttt
      361 ctccgtcacc gcgaagacag tcggctcgat atagtatccg ttcttgagcg ccgggtccga
      421 cggcggtccg ccgccggtga ttagccgggc accttcgctt tttgctgaat cgataaagct
      481 catgacgcga tcgaattgct gcttcgacac gatcgcgccc atagtcgtcg ccggatcggt
      541 gggaatcccc ggcttgtagt atttgatctt ttccttcacg cgcgcgacca ccgcgtcata
      601 gatcttttcg tggataaagg cccggctggt cgagccgcat gactgtccgc accaggtgaa
      661 attcatgccg cctatcactg cagcggcgac gtcatccgga tcggcgtcgg caaaggcgat
      721 cagcgcgttc ttgccgccaa gctccagcat cgtgcgcttg acggtatcgg acgccgcctt
      781 catcacggca cgcccggtcg ggacgctgcc gatcaatgcg atcatcgcga catccggatg
      841 acttgcgagc cgctgtccgg cctcgcgtcc gcccggcacg acattgaaca cgccggcggg
      901 cagcagcccc ccgatcagct cggcaagccg caaggaggag aggggtgcct gctccggcgg
      961 ctttacgacc acggtattgc cggccgctag cggagcagca gacttacccg cgcaaaacat
     1021 gaaaggatga ttgaaaggaa taatccgtcc cacgacaccc aagggctcgc ggacggagaa
     1081 attcaccacg tccggcccca tcggaatcga agcgcctttc atctcggtga cgaaaccagc
     1141 gaagaactcc acttggactg cggcgatcat cgcgtcgctg accatctcct taacggggtt
     1201 gccgcagtcg gcggcatcga tcatcgcgag ttcgttggcg ttctggcgca gaatttccgc
     1261 tattcgccgc aggatctttg cgcgctccag cggcagcacg cgccgccatt cgttaaaagc
     1321 ggcctttgcg gacgcgacgg cggcatcgat gtcgtctgcg ccggtctccg cgaccttgcc
     1381 gagtgactgg ccggtgccgg gattgatcgt atcggcatag cggccggctt tcgggtcgtg
     1441 ccaaccgccg ccatagtaag cgccccggtt tttgggcagc acgacggcct gggcggaagc
     1501 ggcttgcgga gaaacagcgg ttgtcatgtc gatatccgtt cggacgtctc acctgcgcgg
     1561 gaaaatctga ataagttctg cggtttgctc cttgctgagg ggagcgggaa tgaatttgag
     1621 gttcaccgct tcgctcatga gcgaatccat gccgtggatc tggtccggat tgaccaggcc
     1681 cttcgggaaa aattcatccc gcacgcgctt ggccatcggc tccggcaccc tggcgaattc
     1741 ggcatagtct gcaaccacct gcggggttga ggaatacata tagtcgatgc tttcgcgata
     1801 ggccttcata aaccgctcga tcacatcctt gcgcttggcg agcacgtcgg cattcgcgac
     1861 caatacgcgg atcgtttgtc cgcgcaccaa cgtggcatcg gtcgcgcgtg cgaccagatg
     1921 aattttgcct tcctccattt ccttgagccc gaatggcggt gatgcccagc cgacgtcgac
     1981 ctggtccgtc atgacggccg tgagcgtggc gcttggattg ccggtcgcct gcggtttcgc
     2041 agtgagcttg aattcgtcaa ggaaggcccg caccacgcta tgggtcgaag acccattggt
     2101 cgaataagcg atggtgtgcc cgttagtgtc cttgagcgtc ttgatcgacg gatttttggc
     2161 gtaccaatag tcggcg
//
LOCUS       DATDHO010000962         2181 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_244291, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000962 DATDHO010000000
VERSION     DATDHO010000962.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244291"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="VIY07_18870"
     CDS             <1..556
                     /locus_tag="VIY07_18870"
                     /inference="COORDINATES: protein motif:HMM:NF020387.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RES family NAD+ phosphorylase"
                     /protein_id="HEY6383857.1"
                     /translation="PFRYGAPYPRGSRFRRAGRTRGVFYGAENPDTAIAELCFWRLVF
                     FSESPATRWPSEAGEYTAFAARYSTERAIDLTKPPFDARRAVWTHKTRYDECQEFAGL
                     ARSAEIEIIKYLSVRDPKKQLNIALLTCRAFAATDPVERQTWRIILGSNGARALCEMP
                     RVSLDFDRNAFRGDPRIDGIKWER"
     gene            593..1171
                     /locus_tag="VIY07_18875"
     CDS             593..1171
                     /locus_tag="VIY07_18875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383858.1"
                     /translation="MFGFGKTRKIEGAMADWLAHPMEFGVRPKSVRFRRTHRVKLVTY
                     GPVEVHVVDYEMPDGTKGRGFVNGSLTWSFIGEEVNAIADQDHFVAYCGWAWLFPAIQ
                     AKTVTTDFISEGEEDRLTGAVRTTGVADLRMTGRYKIGSSEVFEYSGTRNGIALKGAG
                     DGDRQVEFEATHPCFFLPTIYFFLGREVILEG"
     gene            1214..>2181
                     /locus_tag="VIY07_18880"
     CDS             1214..>2181
                     /locus_tag="VIY07_18880"
                     /inference="COORDINATES: protein motif:HMM:NF020650.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383859.1"
                     /translation="MIVARGIAIALILALSGAQTEAQNLKAWRHGVIEPKGDAGFMVI
                     VGQRDFGARHGLKIDIVPLKNGATAHKALLAGELDSIESSPGATILAGAHGADIKILG
                     CDWPGVPHGLMVRSGIRKVEDLKGKTIAVAAPGSLPNLLVNAILEQHKIRASEVRFAN
                     LGGDLERFKAVLAGVADGGIVAAEFMAVASNEVKMLVTCHEALPNYVRLCLIMTGKTV
                     ATRRDDAINFVAAEIEALKFAVSHRDETIKLTQATIQAKPDDPRPAYAFDDTIRQNAI
                     DPEASLPLEKLNWMQNELVRAGNLKTPIDLSKIIDPEIRIEALKRIA"
BASE COUNT          494 a          565 c          674 g          448 t
ORIGIN      
        1 gccattccga tatggcgctc cctatccacg ggggtctcgc ttcaggcgag ccggtcgtac
       61 gcgcggagtt ttctatggcg ccgagaatcc cgatacggca attgcagaac tatgtttctg
      121 gcgtttggtg ttcttttctg aatctccggc aaccaggtgg ccgtccgaag ctggcgagta
      181 caccgcattc gcggcgcgat actcgacgga acgggcaatc gatctgacaa agccgccgtt
      241 cgacgctcga agggctgtct ggacgcacaa gacgcgatat gacgagtgtc aggagttcgc
      301 gggcctcgcc cgctcggcag aaattgaaat catcaaatac ctgtcggttc gcgaccccaa
      361 aaaacagctg aatatagctc tcctgacgtg ccgcgcattt gccgccaccg atcccgttga
      421 gcgccaaacc tggcgtatta ttctcggcag caatggagca agagcgcttt gtgagatgcc
      481 gagagtgagc ctcgattttg atcgaaatgc ttttcgcggc gatccgcgaa tcgatggaat
      541 aaagtgggaa cgttgatcgc ttttcattca tggcgtctgg gcgaaaagaa tcatgttcgg
      601 attcggaaag accagaaaga tcgaaggggc gatggccgac tggctcgcac acccgatgga
      661 gttcggagtg cgtccgaaga gcgttcgatt ccggcgcacc cacagggtga agctggtgac
      721 ctatgggcct gtcgaggtcc atgtcgtaga ttacgagatg cccgatggga ccaagggacg
      781 tggctttgtc aatggatcac tgacttggtc gttcatcggc gaggaggtga atgcaattgc
      841 cgatcaagat cacttcgtag cttattgcgg gtgggcttgg ttgtttcccg cgatacaagc
      901 gaagacggtg acgacggact tcatttcaga gggagaagag gatcggctca cgggggccgt
      961 aagaaccacc ggcgtggccg atctccgaat gaccggaaga tacaagatcg ggagcagcga
     1021 ggtctttgag tattccggga cgcgcaatgg aatcgcattg aagggcgcgg gagatggcga
     1081 ccgccaagtc gaatttgagg ccacgcatcc atgcttcttt ctgccgacga tctacttttt
     1141 tcttgggcgc gaggtgattc tggaaggtta agaaggcgag ccctgcgaac gttgagtatg
     1201 gtttgaaccc ggcatgatcg tcgcgcgagg tattgccata gcgcttattc tggccctttc
     1261 aggcgcacag actgaggcac agaacctaaa ggcctggaga cacggtgtca tcgagccgaa
     1321 aggcgacgcc gggttcatgg tgatcgttgg tcagcgtgat tttggcgcgc ggcacgggct
     1381 gaagatcgac atcgtaccgc tgaagaacgg cgccaccgcg cacaaggcac tgctcgccgg
     1441 cgaactcgac agcatcgaat cgagcccagg cgcgacgatc ctggccggcg ctcatggtgc
     1501 cgacatcaag attctcggat gcgattggcc cggcgtgcct catggattga tggtcaggtc
     1561 gggcattcgc aaagttgagg atctcaaggg caagacgatc gcggttgcgg cgcccggttc
     1621 actgccaaat ctgttggtca acgccattct tgagcaacac aagattcggg cgtccgaggt
     1681 gcgtttcgca aatcttggcg gtgatctcga gcgcttcaag gcggtgctgg ccggagtggc
     1741 ggatggtgga atcgtcgcag ccgagttcat ggcggttgct tcgaacgagg tgaagatgct
     1801 ggtgacttgc cacgaagcgc tgccgaatta tgtgcggctg tgcctgatca tgactggcaa
     1861 gacagtcgca acgcgccggg acgatgccat taatttcgta gccgccgaaa tagaagcgct
     1921 gaaattcgcc gtcagccatc gagacgaaac gataaagctc acgcaagcaa ccatacaggc
     1981 aaagccagac gatccgcggc ctgcctatgc ctttgacgat acgatcagac agaatgccat
     2041 cgacccggaa gcaagcctgc cgctcgagaa attgaactgg atgcaaaacg agttggtgag
     2101 ggccggcaat ttgaagacac cgattgatct gtcgaagatc atcgatcccg aaatccgcat
     2161 tgaagcgctc aaacggatcg c
//
LOCUS       DATDHO010000963         1522 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_93619, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000963 DATDHO010000000
VERSION     DATDHO010000963.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93619"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..881
                     /locus_tag="VIY07_18885"
     CDS             <1..881
                     /locus_tag="VIY07_18885"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEY6383860.1"
                     /translation="NFSRDRIVLYVHGSTQAAETTFDLALDGMSWMDDLARNGWDAWF
                     MEMRGFGRSTKPPEMDQPAANNPPIAPAAIAVRDLATAIDHIRQRRGAPRISVIGYSR
                     GTALTGMYAAQNPDKIHRLVMYGQNWIRVSPTTAGTPAPIGAYQTWTIAEARARIQDG
                     APADARDNLMPPHWVAAWSAAVLATDPVGAVRTPPVVRTPAGTVQDGRDTWLAGKAAF
                     DPSQIKAPTLVITGEWDGVNPPALARGMFAKLINAPVRRFTEVGEATHFMMVEKNRHQ
                     LFGQTRFFLEEDFSKR"
     gene            1105..1497
                     /locus_tag="VIY07_18890"
     CDS             1105..1497
                     /locus_tag="VIY07_18890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383861.1"
                     /translation="MDRSSFLARLIGPTFVAIALGMLINLSTYERMIAEALRPGILLY
                     LSGLLSLLAGLAIINLHNTWHMDWRVIITVLGWLMTIGGIIRIVAPQITIAIGSTVYS
                     GRAPTIVVMLIVGALGAFLSVKGYVQRT"
BASE COUNT          301 a          436 c          461 g          324 t
ORIGIN      
        1 ccaacttcag ccgtgatcgt atcgtgctgt atgtccacgg cagcacgcag gcggcggaga
       61 cgacattcga tctcgcgctg gacggaatgt cttggatgga tgacctcgcg cggaacggtt
      121 gggacgcgtg gttcatggaa atgcgcgggt ttggccggtc cacgaagccg ccggagatgg
      181 atcagcctgc cgccaacaat ccgcccatcg ctccagccgc gattgcggtg cgcgatctag
      241 ccaccgccat cgatcatatc cgccaacggc ggggtgcccc acggatcagt gtaatcggat
      301 attcgcgcgg gacggcgctc accgggatgt atgcggctca aaatccagac aagattcatc
      361 ggctggtcat gtatgggcag aattggattc gcgtttcgcc tacgacagcg ggaacaccag
      421 ctccgatcgg cgcctaccag acttggacaa tcgccgaggc acgagcgcgc atccaggatg
      481 gggctccggc ggacgcccgt gacaacctca tgccgcctca ttgggttgcg gcctggagtg
      541 ctgcggtatt ggccaccgat ccagtcggag ccgtccgaac cccgccggtc gtgcgtaccc
      601 ctgccggcac tgtgcaggac ggacgcgaca catggctggc tggaaaggcc gcattcgatc
      661 catcacaaat caaggcgcct accctggtga ttaccggtga gtgggatggt gttaatccac
      721 ctgcgcttgc ccgcggaatg tttgcaaaac tgatcaatgc accagttcga cgttttaccg
      781 aggttggcga agccacgcac tttatgatgg tggaaaagaa ccgccatcag ctcttcggcc
      841 agacgcggtt ctttctcgag gaggatttct cgaagcggta gcctgtgtcc gctttgggtc
      901 agaagtagag atcgacgcaa actcgcgcac atgtccgctt ttggcccata gcagacatga
      961 gctactgcgc tgcacatgtc tgctcttagg ggtaaagcgg acatggccca ttgcagtgtt
     1021 aggcgcgagt ggcttgtgag aacccgagat gcagctaaat tttgttacgg ttgaacggca
     1081 gaacttggag catcacgacg tcctatggac cgttcgtcgt ttctcgccag actgataggg
     1141 ccgacattcg tcgccatcgc actcggcatg ctgatcaatc tcagcacgta tgagagaatg
     1201 atcgcagagg cgctgcgccc gggcatcttg ctctatctgt ccggcctcct gtcgctgctc
     1261 gcgggcctcg cgatcatcaa tctgcacaat acctggcaca tggattggcg cgtgatcatc
     1321 acggtgcttg gctggctgat gacgattggt ggcataatcc gcatcgtcgc gccgcagatc
     1381 acgatcgcga ttggttcgac tgtctatagc ggtcgcgctc ccacgatcgt ggttatgctg
     1441 attgtcggcg cactgggcgc tttccttagc gtcaagggct acgtgcagcg aacctgacga
     1501 gtgcagaatt gatggggaat ct
//
LOCUS       DATDHO010000964         4987 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_444358, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000964 DATDHO010000000
VERSION     DATDHO010000964.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4987
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444358"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2083)
                     /locus_tag="VIY07_18895"
     CDS             complement(<1..2083)
                     /locus_tag="VIY07_18895"
                     /EC_number="7.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasma-membrane proton-efflux P-type ATPase"
                     /protein_id="HEY6383862.1"
                     /translation="MTSEQLAVSSMPEGASASSRVAAVFQQEKSSSDGLSSAEAAHRL
                     AQYGPNTIADRTESKWHKLAAYFWGPLPFLIEAAAIISALRRDWGDFAVVTGLLIYNA
                     AVGFWQDDKAANALAALKKGLALRARVRRDGKWETIDATDLVPGDVVDIAGGQIVPAD
                     VVLIDGEYLSCDQAALTGESLPVSKKVGDQAYSGSIAKQGSMKGLVTATGSNTFFGRT
                     AKLVGSAGAVSHSQRAVTQVGDFLLLLALVLAAVLVGVQGYRLAIADDWSWSEFGRVT
                     QYVLVLLIASIPVALPAVMSVTMAIGAYALSLQKAIVSRLSAIEELAGVDILCSDKTG
                     TLTMNELTVQSGIPFGSAKADDVLRDAALATQKSSQDAIDVAILKAADGRGDLQALKQ
                     TAFVPFDPVNKRTISTVVDQSGQVRHYAKGAPQAVASLANPDNAILERYKATVSNLAS
                     KGYRALGVATSNDGKAWEIVGIVSLMDPPRADAKTTIAEAEALGLNVKMVTGDDVAIG
                     DQIAAQLGLGDHLLVASDVFGEGTKATAALSSSVVDAVERADGFARVFPEHKYEIVKT
                     LQSRGHIVGMTGDGVNDAPALKQADCGIAVSGATDAARSAAALILTAPGLSTIINAVR
                     VSRQIFERIVSYVYYRVAMTLDIMVLVVASIVFFQFEPITAVMIVVLALLDDIPIMTI
                     AYDNVPPAPRPV"
     gene            2249..3679
                     /locus_tag="VIY07_18900"
     CDS             2249..3679
                     /locus_tag="VIY07_18900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383863.1"
                     /translation="MRTAEQNTVSSKTSVFGLLDEAPMTPLHYCYWLLASGGTLLDGF
                     SVVALGIAIPLLKQDMTITPVLIGLIGSALVLGAVLGATLGGIAADRIGRKRAFIADM
                     AILVAGSALCAVARDPASILVGQFLIGVGIGIDFPTSGSYVSEIMPRALRSRMTVATI
                     ALQSVGMVLAAITAIAIFRAHPTDTDWRLLLGTGGVLAAIFMSARMLLPESPRWLAEK
                     GELAEAAKVLSRLINAPVPLTRLEVSERATPATKSLGFAALFSPRYRTRTLLVSLPWL
                     LMDVATYGVGLFTPVILGAMHFGSAHTGTVAAVFADAEGSGLVDLFLLAGFIVGIWAI
                     PRFGRIPLQVGGFAGMAFGMLLLMFAALADDGPQMHLGLVIAGFVLFNFAMNAGPNAT
                     TFTLPPILFPTAIRASASGLAAACAKLGATFGTFVVPQLQAAWGLIAVLALMAFVSIG
                     GLVATAAFAHAVDKEDELEETTDDIG"
     gene            complement(3805..>4987)
                     /locus_tag="VIY07_18905"
     CDS             complement(3805..>4987)
                     /locus_tag="VIY07_18905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HEY6383864.1"
                     /translation="EIVDGIKQSPIEGVSMMYTFDKKNENAASTHKTQYFEMFADRAI
                     YHDGWIASTKVMRPPWTTVAKLPNVLDYPWELYDLRNDWTQYEDVAAKNPAKLKEMRD
                     LFWKEAEKYQVLPLDASVATRLIAPRPSLSAGRTAFTWTQPLTGTPNGDAPSLLNTSY
                     NFKAEVEIPPGGAEGMLITQGGRFGGYGFYVLKSKPVFLWNLVDLKRVRWEGSELTPG
                     KHTIEFDFKYDGLGAATMAFGNYSGIGRGGTGVLKVDGNAVATEKMEHTLPFILQWDE
                     ALDIGSDTGTPVDDTDYQTPFTFTGKINKITLTIDRPKLSPEEIKRLQETARAAGDGP
                     SVETTGAAISQVGVSSNIGLGLIQKLELRIDKREGCRKQAEAQNLGVIERLQFIRRCM
                     Q"
BASE COUNT          935 a         1507 c         1449 g         1096 t
ORIGIN      
        1 gtaccggacg cggtgccggc ggcacgttat cgtacgcgat cgtcattatg gggatatcgt
       61 ccagcaatgc gagaacaacg atcatgacgg ccgtgatcgg ctcgaactga aaaaagacaa
      121 tcgaagcaac gaccaacacc atgatgtcga gcgtcatcgc gacgcgatag taaacgtagc
      181 tcacaatccg ttcgaatatc tggcgggaaa cgcggacggc attgataatt gtggacaggc
      241 cgggcgcggt aaggatcagc gccgctgcgc ttctggcggc atcggtcgcg ccgcttactg
      301 ctatgccgca atcggcctgc ttgagtgccg gtgcatcgtt gaccccgtcg cccgtcattc
      361 cgacgatatg gccgcgactc tgcagcgtct tcacgatttc gtatttgtgc tccggaaaga
      421 ctcgcgcaaa cccgtctgca cgctccaccg catcgacgac cgagctgctc agagcagccg
      481 ttgctttggt gccctctcca aaaacatcgc tggcgacgag cagatggtcg ccaagtccaa
      541 gctgggcggc gatctggtct ccgatcgcca cgtcgtcccc cgtcaccatc ttgacgttca
      601 agccaagcgc ctctgcctcg gcgatggttg tcttggcatc cgccctcgga ggatccatca
      661 gcgagacgat tccgacgatc tcccaggcct tgccatcgtt ggacgtggcc acacccagag
      721 cgcgatagcc cttgctggcg agattcgaca ccgtcgcctt gtagcgctcc aggattgcat
      781 tatccggatt ggccagactt gcgaccgcct ggggcgcacc cttggcgtag tggcgaacct
      841 ggccgctttg atccacgacc gtcgaaatcg ttcgcttgtt gaccggatcg aacgggacga
      901 aggccgtctg cttcagggcc tgcaagtcgc cgcgtccgtc ggctgctttc aggatggcga
      961 cgtcgatcgc gtcctggctg cttttttggg tcgcgagagc ggcatctcga agcacgtcgt
     1021 cggctttggc cgagccgaat ggaatgccgg attgaaccgt aagttcgttc atcgtcaggg
     1081 tgccggtctt gtcgctgcaa agaatgtcca cgccggcgag ctcctcgatg gcggacaacc
     1141 gggagacgat cgccttctgg agcgacagcg cgtaggcccc gatcgccatc gtgacggaca
     1201 tcaccgccgg caacgcgacc gggatcgacg caatcaacaa tacgagcacg tattgcgtga
     1261 ccctgccgaa ttctgaccaa ctccagtcat cggcaatggc gaggcgatag ccttgaacgc
     1321 caaccaggac cgcggcgaga acgagagcga gcagaagcag gaaatcgccg acttgagtga
     1381 cggcacgctg agagtgtgaa acggcgcccg ctgatccgac gagcttcgcg gtgcggccaa
     1441 agaaagtatt gctgccagtg gcagtcacca gccccttcat cgagccttgc tttgcaatgc
     1501 ttccggaata cgcctgatcg ccgaccttct tggaaacggg caatgattcc cctgttagcg
     1561 ctgcttgatc gcagctcaga tattcgccgt cgatgagaac gacatccgcc ggcacaatct
     1621 gcccgccggc aatgtcgacc acgtcacccg gcaccagatc tgtcgcatca atcgtctccc
     1681 attttccatc acggcgcacg cgagcgcgga gcgccaatcc tttcttgagg gctgccagcg
     1741 cattcgcagc tttatcgtcc tgccagaaac caacggccgc gttgtaaatg agcaacccag
     1801 ttacgacggc aaagtctccc caatcgcgcc gaagcgccga gataatggcc gcggcctcga
     1861 tcaggaacgg aagcggtccc cagaaatacg ctgcgagctt gtgccatttg ctttcggttc
     1921 ggtcggcgat cgtgttcggc ccatactgcg caaggcgatg agccgcttct gccgacgaca
     1981 acccgtcgct cgaagatttt tcctgctgga atacagctgc aacacggctg ctcgccgatg
     2041 ctccctcggg cattgatgaa acggcaagct gttcgctcgt catggcaagc ccggagctga
     2101 aaaaatggac cgttgacgct acgcgtcttt agtcattcgc gccagccgca gtcccatcag
     2161 ccgcgccgcc aacggagaca gacgcgccgc cttactctac ggtcccggag acgtggcaaa
     2221 tcatctaggc gcgctcggaa gttcgctgat gcgtaccgct gaacaaaata ccgtctcgtc
     2281 gaaaacatcc gtcttcgggc tcctcgacga agctcccatg acgccgctgc attactgcta
     2341 ttggctgctg gccagcggcg gcaccctgct cgatggcttt tcggttgttg cgctcggaat
     2401 agccatcccc ctcctcaagc aagacatgac gattactcca gtactgatcg gcctcatcgg
     2461 ctcagccctg gtgcttggtg ccgtgcttgg ggcgacgctg ggcggcatcg cggcggatcg
     2521 aataggccgc aagcgcgcgt ttattgcgga tatggccatt ctggtggccg gctcggcgct
     2581 ctgcgcagtg gctcgcgacc ctgcatctat cctggttggc cagtttctga tcggggtcgg
     2641 aatcggcatc gattttccga ccagcggttc gtatgtgtcg gagatcatgc cgcgcgcttt
     2701 acgcagccgc atgacggttg caacgattgc attgcaatcc gtcggcatgg tcctcgctgc
     2761 gatcaccgcc attgcaatat ttcgcgcgca ccccacggac acggattggc ggttgctgct
     2821 cggcacggga ggtgtgctgg cggcaatctt tatgagcgcc cgcatgctcc ttcccgagag
     2881 tccacgttgg ctggcagaaa aaggcgagct cgccgaagct gcaaaggtcc tctctcgtct
     2941 catcaatgcc ccggtgcccc tgacgcgtct ggaagtttcc gaaagagcga cgccagcgac
     3001 aaagtcactc ggctttgccg ctctattcag tcctcgttac cggacccgca cattgctcgt
     3061 ctcgttgccc tggctgctga tggatgtcgc cacctatggc gtcggattat ttactccggt
     3121 cattttggga gcgatgcatt ttggttctgc acacactggc acagttgcag ccgtattcgc
     3181 ggatgcggag ggcagcgggc tggtcgacct gttcctgctg gcgggtttca tcgtgggtat
     3241 ttgggccatt ccgcgcttcg gccggattcc attacaggtg ggaggattcg ccggaatggc
     3301 attcggaatg ctcctgctga tgtttgccgc gttggcggat gacgggcctc agatgcatct
     3361 cggactggtc attgcgggct tcgttctttt caatttcgcc atgaacgccg gtccaaacgc
     3421 cacgaccttc acgctgcctc caattctttt cccgacggct attcgagcct cggcgagcgg
     3481 cttagcggca gcgtgcgcga aactcggtgc gactttcggc accttcgttg ttcctcaact
     3541 ccaggccgca tggggattga tcgccgtgct tgcgttgatg gcctttgtca gcatcggggg
     3601 actcgtggct accgctgctt ttgcgcatgc cgtcgacaaa gaggacgaac ttgaagagac
     3661 aaccgatgat atcggttaga accagcacgc tgaaaggggg tgccggcgga gtggttagga
     3721 ctggtcagaa atctgtagag gtcaccgcca ctgtgcggcg tttccggctt tgggtcatca
     3781 gtcaatcgga ccgatacaat caggctattg catgcatctg cgaatgaatt gcagccgttc
     3841 gataacaccg agattttgcg cctcggcctg tttgcgacag ccttcccttt tatcgatccg
     3901 caactcgagt ttttggatca accccaggcc aatattgctc gacaccccca cttgggaaat
     3961 cgccgcccca gtagtttcta ctgatggtcc gtcgcccgct gctcgcgctg tctcttgcag
     4021 acgtttgatt tcttcgggac tcaatttcgg tcgatcgatg gtcaaagtaa tcttgttgat
     4081 cttgccggtg aaagtgaaag gcgtctggta gtcggtatcg tccaccggcg tgccggtatc
     4141 ggagccaata tcgagcgcct cgtcccattg cagaataaat ggcaacgtgt gctccatttt
     4201 ctctgtagct acggcattgc cgtcgacctt gagcacgccg gtgccgccgc ggccgatgcc
     4261 gctgtaattg ccgaaggcca tggtggcagc gccaagtccg tcatatttga agtcgaactc
     4321 gatcgtgtgc ttgccggggg tgagctcgga gccttcccag cgcacgcgct tgaggtcgac
     4381 aagattccag aggaacaccg gcttgctctt gagcacatag aagccgtatc cgccgaagcg
     4441 tccgccttgg gtgatcagca tgccctcggc gccgcccggt ggaatctcaa cctcagcctt
     4501 gaagttgtat gatgtgttga gaaggctcgg cgcatctcca ttcggcgtgc cggtgagcgg
     4561 ctgggtccag gtgaacgcag tgcgaccggc gctcaggctg ggtcgcggcg caatgaggcg
     4621 ggtcgcaacg gacgcgtcga gcggcagcac ctgatatttt tccgcctcct tccagaacag
     4681 gtcccgcatc tccttcagct tggccgggtt cttggcggca acatcttcgt actgcgtcca
     4741 gtcgttccgc aggtcgtaga gctcccatgg ataatcaagc acatttggca acttggcgac
     4801 ggtcgtccat ggcggacgca tgacttttgt gctcgcaatc cagccatcgt gatagatggc
     4861 gcggtcggcg aacatctcaa aatactgcgt cttgtgggtc gaggccgcat tctcgttctt
     4921 cttgtcgaag gtgtacatca tgctgacacc ctcgatcggg ctctgcttga tgccgtcaac
     4981 gatctct
//
LOCUS       DATDHO010000965         2853 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_244469, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000965 DATDHO010000000
VERSION     DATDHO010000965.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2853
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244469"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..366)
                     /locus_tag="VIY07_18910"
     CDS             complement(<1..366)
                     /locus_tag="VIY07_18910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase P60"
                     /protein_id="HEY6383865.1"
                     /translation="MVALDPRLNPFRPEIAARHLQGQVEAERFVEGTRHQIIEPVTAV
                     RRAASHDARLDTEALLGERAMIYETTEDGWAWGQLETDGYVGWLSANALGASGPAPTH
                     KVAALRAIVFPGPDIRLPAI"
     gene            complement(370..1746)
                     /locus_tag="VIY07_18915"
     CDS             complement(370..1746)
                     /locus_tag="VIY07_18915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HEY6383866.1"
                     /translation="MHPVFASAGKTQATPIWFVHRGNFDAVRRQFGERERGFIAAAGF
                     EAKPGRLMLLPSVDGKLAGVVFGLESPGETDGDRFRPGQLPSLLPPGTYRFANAPHDE
                     RLGALAFALGTYQFARYRKAEPRKVRLVVPERLDGEDLSRIVEGVTLCRDLTNTPSND
                     MGPSELEAAGRALAKRHGAKVQVTTGNALQKKFPLVHAVGAGSERSPRLIDIAWGKSG
                     DPRITLVGKGVCFDTGGLDIKPDSGMLNMKKDMGGAATALGLAHMIMARGLKVRLRVI
                     IPAVENSISGASFRPRDVYVSRKGISVEIGNTDAEGRLILADALALADEHKPAMIVDF
                     ATLTGAARVALGPEVVPFFTKDDALADEISRAGAGENDPLWRMPLWQPYETMLDSKIA
                     DLNNVATGGHGGAITAALFLRRFVTTKSWLHLDIFAWTPAAKPGRPEGAECQAARAIY
                     SLLCRRYS"
     gene            1873..2682
                     /locus_tag="VIY07_18920"
     CDS             1873..2682
                     /locus_tag="VIY07_18920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEY6383867.1"
                     /translation="MPFTIRAVRLAARASVTTALAASSAGCLNSGPRDATGSLASASA
                     TTSQADARSSLDTLGSRYRENPNDVDAAIAYARALRATDQRSQAVAVLEQASIRSPRS
                     MPLLGAYGRALAEAGQYKQAIEALGRAHTPDNPDWSILNVQGAVLDQMGRHAEAQRHY
                     ASALKIVPDEPSVLSNLDLSYLLTKDLKNAEITLRRAVAQPNAGPKVRQNLALVVGLR
                     GRFEEAEKIASADLPDNEAAANVNYLRQMLAQQGNLKKLGRASVSAPDTGS"
BASE COUNT          552 a          913 c          877 g          511 t
ORIGIN      
        1 gatggcaggc aacctgatgt ccgggcccgg aaatacgatt gcgcgaagag ccgcgacctt
       61 gtgggtgggg gccggtccac ttgcgcctag tgcgttggcg gagagccagc caacatagcc
      121 gtcagtctcg agctgccccc aagcccagcc gtcctcagtc gtttcgtaaa tcattgcgcg
      181 ctcgcccagc agcgcctcgg tgtcgagccg agcatcatgc gatgccgcgc ggcgcacggc
      241 agtaacgggc tcgatgatct ggtggcgcgt gccttcaacg aagcgctcgg cttcgacctg
      301 gccctgcaga tgcctcgccg caatctccgg ccgaaaggga tttaagcggg gatcaagcgc
      361 aaccatggct caggaatagc gcctgcaaag caatgaatag atggcgcgcg cggcctgaca
      421 ttcggcgcct tccgggcgtc caggctttgc cgcgggtgtc caggcaaaga tatcgagatg
      481 cagccatgat tttgtcgtga cgaaccgacg cagaaacagt gcggccgtga tagcgccgcc
      541 atggccgccc gtcgccacat tgttcagatc tgcgattttt gaatcgagca ttgtctcata
      601 gggctgccac aacggcatgc gccacagcgg atcgttctcg cccgccccgg cacgggaaat
      661 ctcgtcagcc agggcgtcat ccttggtgaa gaatggcaca acctcgggtc ccagcgccac
      721 gcgggccgcg ccggtgaggg tggcaaaatc aacgatcatc gcaggcttgt gttcgtccgc
      781 gagcgcaagc gcatcggcca ggatcagccg gccctccgcg tccgtgttgc cgatttcgac
      841 tgaaatgccc ttgcgcgaaa cgtagacatc gcgcggccgg aagctcgcgc cggagatcga
      901 gttctccacg gcggggatta tgacccggag ccggaccttc aggccccgag ccatgatcat
      961 atgagcgagg ccgagcgcgg ttgccgcccc gcccatgtcc ttcttcatgt tgagcatccc
     1021 ggaatcgggc ttgatatcga gaccgccggt gtcgaagcag acgcccttgc cgacgagcgt
     1081 tatcctcgga tcgcccgatt tgccccaggc gatgtcgatc agacgcgggg atcgctcaga
     1141 accggcgccg accgcgtgca ccaagggaaa ttttttctgc agcgcgttgc cggtcgtgac
     1201 ttgcaccttg gcgccatgcc gtttcgcaag cgcgcggcct gccgcttcga gctcgctcgg
     1261 ccccatgtcg ttggagggcg tgttggtgag atcccggcac agggtcacgc cctcgacgat
     1321 gcggctgaga tcctcgccat caagtctttc gggcaccaca aggcgcactt tgcgcggctc
     1381 cgccttgcgg taacgggcaa actgataggt gcccagcgca aacgctagcg cccccagccg
     1441 ttcgtcatgg ggcgcatttg caaagcgata tgtgcccggt ggcaataggc tcggcaattg
     1501 cccgggccga aaacggtccc cgtcggtctc tccgggactt tcgaggccga acacgacgcc
     1561 ggcgagtttg ccgtcgacgc tgggcagcag catcaagcga ccgggcttgg cctcgaagcc
     1621 ggcggcggca ataaacccgc gctcacgctc gccaaactgc ctgcgcaccg catcgaagtt
     1681 tccacgatgg acaaaccaga tcggcgtcgc ctgcgtcttg ccggcgcttg caaaaacagg
     1741 atgcatgtta ccccgcggta tcgcgccaag aggtcgatcg gtggacatac cggttatgga
     1801 aaaaaatcat gcgcgaacaa ggccagttta caagttaacc agtcattagg gttaacgttt
     1861 tattgctcgg atatgccgtt cacgatacgc gccgttcgtc tggctgcccg agcttccgta
     1921 acaaccgccc tcgccgcatc ctcggcgggc tgcttaaata gcggacctcg cgatgcgacc
     1981 ggttcgctag cctcggccag cgctacgacg agccaggccg atgcgcggag ctccctggac
     2041 accctcggct cgcgctatcg cgaaaatccg aacgatgtcg acgcagccat cgcctacgcg
     2101 cgcgcattgc gggccaccga tcagcggtct caggcggtcg ccgtgctcga acaggcatcg
     2161 atccgcagtc cgcgcagcat gcccttgttg ggtgcctacg gccgtgccct ggctgaggcg
     2221 ggccagtaca agcaggcgat cgaagcgctc ggccgcgcgc acacgcccga caatccggat
     2281 tggagcatcc tcaacgtgca aggcgcggtt cttgatcaga tgggccggca tgccgaggcg
     2341 caacgtcact atgcgtccgc gctcaaaatc gtgcccgacg aaccctctgt gctctcgaac
     2401 ctcgacttat cgtatctgct gacaaaggat ttgaaaaacg cagagataac cttgcggcgc
     2461 gcggtggcgc agccgaacgc cggaccgaaa gtacgccaga atctggcgct ggtcgtcggc
     2521 ttgcgtggcc gattcgagga ggcggaaaaa atcgccagcg cggacctgcc cgacaatgaa
     2581 gccgccgcca acgtcaatta tctgcggcaa atgcttgcgc agcagggcaa cctgaaaaag
     2641 ctgggccgcg catccgtttc cgcgcccgat accggttcct gatcctggat acgcgcggtg
     2701 tcggcggcag cgtgccggct tttctactgt aacgccataa ccttgatcgc tgccggcccg
     2761 agaatgacaa tgaaaagcac gggcaggaaa aagagaatca ttggcacggt cagcttgggc
     2821 ggcagggcag ccgctttctt ctcagcttcc gcc
//
LOCUS       DATDHO010000966         2568 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_197717, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000966 DATDHO010000000
VERSION     DATDHO010000966.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2568)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2568)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2568
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_197717"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            209..511
                     /locus_tag="VIY07_18925"
     CDS             209..511
                     /locus_tag="VIY07_18925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383868.1"
                     /translation="MKILAIERFRADAGSLLRRSLSPRAVKIVDSIYLAAGCVTESQQ
                     MAETAPKYRKSREKFGEFTTIQCSVKGPWEPASNTYVTSNTYVNRTDGALFSGRGD"
     gene            536..745
                     /locus_tag="VIY07_18930"
     CDS             536..745
                     /locus_tag="VIY07_18930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383869.1"
                     /translation="MNWSLYRADRTTHLKIVVVGLVAGLLIAVIGVSARQLNLGTDIM
                     TAQNPTVIKAGGPVVFTDRSGPTVR"
     gene            842..1996
                     /locus_tag="VIY07_18935"
     CDS             842..1996
                     /locus_tag="VIY07_18935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383870.1"
                     /translation="MRTCLLNLRLTSLLAAGLLLAAQVVHAQPPAMTTAEYQARLAQY
                     QAARGAYEAEATAYWDAIGEKRRERNAKRRDRLPISVDDYVLTQPPIYTGPPRPVDPN
                     APAPPPAERPGIPVVADFLKNAVEQFGFVPDRPASDFDFKRAYAKAALAGGLTREQIV
                     GVYVFETGGNGTYDSQAGLVPYRPGARAISPAVGYNQLLSTNTVSLLAEDGNRYLQAL
                     RQKAKGLSGPAKLAMERKIEGLKRMIAYSRSVPNRWSEHDRLAKTTLGGFGIHAAVLD
                     LDLGPILQVQKLTNSVRFARAKGYNAPITAAELELMNLTGDGNGFDMVKMPQALRARV
                     PTSNFFQREGYERNPVARRTGTVANLVADIEAKMNRGAQARGAREMASAF"
     gene            complement(2019..2420)
                     /locus_tag="VIY07_18940"
     CDS             complement(2019..2420)
                     /locus_tag="VIY07_18940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEY6383871.1"
                     /translation="MVKKSPNPTDKYVGSRVRMRRLMLGMSQEKLGEKLGLTFQQVQK
                     YEKGTNRIGASRLQHIAQILKVPVSFFFDGAVAKPAEDGSTKPPVADYVSDFLSSSDG
                     LALTRAFTNIKDSRLRRRVVDLVEEIAGEQR"
BASE COUNT          534 a          779 c          776 g          479 t
ORIGIN      
        1 cgggctttgg tccccaattg gccacttaac ggctgacaaa aatcacgtgc ccggtcgtcg
       61 acggtgaggc tgggctactt cttcgggggc gaaccagcct cggagacgaa tcgccagcga
      121 ccgcccctct taaatatgga cgcaaggggg cgcattcagc ggcctgccgc gagagctacg
      181 actaacaaac caaagaagcg aggatcgcgt gaagatcctc gccatcgagc gtttccgcgc
      241 agacgccggt tctctcctaa ggagaagctt atccccgcgc gccgtcaaaa tcgtggacag
      301 catctacctc gctgctggct gtgtgacaga aagccaacag atggccgaaa ccgcgccgaa
      361 gtatcggaaa agtcgggaga aattcggaga attcacaacg attcaatgtt ccgtgaaagg
      421 tccttgggaa cccgcaagca atacctacgt tacaagcaat acctacgtta atcgcacgga
      481 cggtgcactt ttctcgggac ggggcgacta agggcgggaa gccccggagg atgtcatgaa
      541 ctggtccctt tacagggcag atcgcactac gcatctcaag atagtggtcg ttgggcttgt
      601 cgcagggctg ttgatcgccg tgatcggcgt ctcggcgcgc cagcttaatc ttggcacgga
      661 cattatgacg gcgcagaacc cgacggtcat caaggccggg gggccggttg tattcaccga
      721 ccggagcggt ccgaccgtcc gatagcacct gtcactattc cttttttccg gcgcgccgca
      781 tttgcggcgc gtctttttgt gaagtagtcg aatcaaccga aatggttgag aaaagcaggg
      841 catgaggacc tgtctgctca atttacgcct gaccagcctg ctggcggccg gtttactgct
      901 ggcggcgcag gttgtgcatg cgcagccgcc ggccatgacg acggccgagt accaggccag
      961 gctcgcccaa tatcaggcag cgcgaggtgc ctatgaagcg gaggcgacgg catattggga
     1021 cgcaatcgga gagaagcgcc gcgagcgcaa tgcgaagcgc cgcgaccgtc ttccgatcag
     1081 cgtcgatgat tatgtgctga cccagccgcc tatctatacg ggccctcccc gaccggtcga
     1141 tccgaatgcg cctgcaccgc cgccggccga gcggccgggg attcccgtgg ttgcggactt
     1201 tctcaagaat gccgtcgaac aatttggctt cgttccggac cggccggcaa gcgacttcga
     1261 tttcaagcgg gcctatgcaa aggctgcgct cgcaggagga ttgacccgcg agcagatcgt
     1321 cggcgtctat gtgttcgaga cgggaggcaa cggcacgtac gactcgcagg ccgggcttgt
     1381 gccttaccgg cctggcgccc gggcgatctc gccggccgtc ggctacaacc agttgctcag
     1441 cacgaacacc gtgtcgctcc tcgccgagga cggcaaccgc tatctccagg cgctgcgcca
     1501 gaaagcgaaa ggactgtccg gcccggcgaa gctggcgatg gagcgcaaga tcgaggggct
     1561 caagcgcatg atcgcctata gccgctcggt cccgaaccga tggagcgagc acgatcgcct
     1621 ggccaagacc acgctgggcg gtttcggaat ccacgccgcg gtgcttgatc tcgatctcgg
     1681 tccaatcctc caggtgcaaa agctcacgaa ttctgtccgc ttcgcccgcg ccaagggcta
     1741 caacgctccg atcactgccg ccgaactcga attgatgaac ctgaccggcg acggcaacgg
     1801 attcgatatg gtgaagatgc cgcaagcgct gcgcgcacgc gttccgacgt cgaatttctt
     1861 ccagcgggaa ggatacgaac gcaacccggt cgcgcgccgc actggcaccg tggccaatct
     1921 tgttgccgac atcgaagcca agatgaatcg cggcgcgcag gcgcggggcg cgcgtgaaat
     1981 ggcgtcggcg ttttagcggt tcgagggact gagcgcagct agcgttgctc gcctgctatc
     2041 tcttccacca gatccacgac gcgccggcgc aaacgcgagt ccttgatgtt ggtgaaagcc
     2101 ctggtcagtg ccagaccgtc ggaactcgac agaaaatccg acacataatc ggcgaccggg
     2161 ggtttcgtgg acccgtcctc ggccggcttg gccaccgcac cgtcgaaaaa gaatgacacc
     2221 ggcaccttca gaatttgggc gatgtgctgg agccggcttg caccgatgcg gttcgtcccc
     2281 ttctcgtatt tctggacctg ctggaacgtc agccccagct tttcgcccag cttttcctgg
     2341 ctcattccca gcatcagccg ccgcatgcgc acgcgagaac ccacgtactt atcggtcgga
     2401 ttcggcgatt tctttaccat catctggata ggcccccgca acgtcaggtt ggacaaagtg
     2461 cagtccgggt cagaaatggc gaaacaaggc taagttgcgc cgacggaaag tacatcgcag
     2521 cggcgatgac ctgtcattaa agcgcagccg cggttttatt agataata
//
LOCUS       DATDHO010000967         2367 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_394238, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000967 DATDHO010000000
VERSION     DATDHO010000967.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2367)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2367)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2367
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394238"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..186
                     /locus_tag="VIY07_18945"
     CDS             <1..186
                     /locus_tag="VIY07_18945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383872.1"
                     /translation="GSARLFPSAAAGAITVSLDKLGSAVGLFAHTQVRWPEATGLGFT
                     RGPAPVARLSATHGAKL"
     gene            186..1394
                     /locus_tag="VIY07_18950"
     CDS             186..1394
                     /locus_tag="VIY07_18950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383873.1"
                     /translation="MKRHVQYLAAAGLFAAGLVSPATAQDTIKIGELNSYKAQPAFLD
                     PYKKGWEMAIEEINAKGGVLGKKLEVISRDDGANPGEAVRVAEELITREGVALIAGTF
                     LSHIGLAVTNFAGQKKVFFLAAEPLTDKITWQNGNKYTFRLRPTTYMQVNMLMPAATA
                     AKKKRWALVYPNFEYGQSAAENFKTLLKKAQPDVEFVTEQAPPLGKIDAGAVAQAIDD
                     AKPDAIFNVLFGGDLAKFVREGNTRGVFKNRTVVSLLSGEPEYLDPLKDEAPVGWVVT
                     GYPWDKVKTKEHQAFVDAYKKKYNDYPRLGSVVGYVTMTSLAAGIAKAKSTDTEKLVE
                     AFKGLQLDSPFGPFHYRASDHQATWGAYVGKIALEGGKGTMTDFQYVDGITVLPTDAE
                     VLKLRPTESN"
     gene            1568..>2367
                     /locus_tag="VIY07_18955"
     CDS             1568..>2367
                     /locus_tag="VIY07_18955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383874.1"
                     /translation="MSFSGLLFQALNGLSTASGLFFVAVGLSLIFGVSRIINIAHGSL
                     YMLGTYIAYSFATHVGGVIGFWGGIVATALVIGVIGALIEILLLRRVYRAPELFQLLA
                     TFALVLVINDATLWIWGPEDLLGPRAPGLRGSIEILGRHLPTYDLFLIVAGPAVLLVL
                     HFALARTRFGRLVRAATQDREMVSALGVNQAVLFTSVFALGAALAGLGGALQVAREPA
                     NLATDLVAIGDAFVVVVVGGMGSITGAYLAAVIIAEVKALCIGIGVVD"
BASE COUNT          435 a          712 c          743 g          477 t
ORIGIN      
        1 gggtcagctc gcctgtttcc atcggccgct gcaggcgcaa tcacggtgtc gcttgacaag
       61 ctcgggtcgg cggtcggact atttgcacac acacaagttc gctggccaga ggcgacagga
      121 cttggattca cccgcggtcc cgcgcctgtg gcgcggcttt ccgccacgca cggagcgaaa
      181 ttatgatgaa gcgtcatgtg cagtatcttg cggctgccgg tctcttcgcg gctgggctcg
      241 tttcgccggc gacggcgcag gacacaatca agatcggcga gctcaacagc tacaaggcgc
      301 agcctgcctt cctcgacccg tacaagaaag gttgggaaat ggcgatcgaa gagatcaacg
      361 ccaaaggcgg cgtcctcggc aaaaagcttg aggtgatctc gcgcgacgac ggcgccaatc
      421 cgggcgaggc cgtgcgggtg gccgaagagc tgatcacgcg cgaaggcgtc gcgctgatcg
      481 ccggcacctt cctctcacat atcgggctag cggtgaccaa tttcgccggc cagaagaagg
      541 tcttctttct cgccgctgaa ccgctcaccg acaagattac ctggcagaac ggaaacaagt
      601 acacgttccg cctgcgccca acgacctaca tgcaggtcaa catgctgatg ccggcggcga
      661 ccgcggcaaa gaagaagcgc tgggcgctgg tctatcccaa tttcgaatat ggccagtcgg
      721 cagccgagaa cttcaagacg ctcttgaaga aggcgcaacc cgatgtcgag ttcgtgaccg
      781 agcaggcgcc gccactcggg aaaatcgacg ccggggcggt ggcgcaggcg atcgacgatg
      841 caaaaccgga cgcaatcttc aacgtgctgt tcggcggcga tctcgccaag ttcgtccgcg
      901 agggcaatac ccgcggcgta ttcaagaatc gcacggtggt gagcctgctc tcgggcgagc
      961 cggagtatct ggacccgctc aaagacgaag caccggtcgg ctgggtcgtc accggctatc
     1021 cctgggacaa ggtcaagacc aaggaacatc aggcctttgt cgatgcctac aagaaaaaat
     1081 ataacgacta tccgcgtctc gggtcggtcg tcggctacgt gacgatgacg tcgctggcag
     1141 ccggcattgc caaggcaaag tcgacggata ccgagaagct ggtggaggcc ttcaagggtc
     1201 tccagctcga tagcccattc ggtccattcc actatcgggc gagcgaccac caggcgacct
     1261 ggggcgctta tgtcggcaag atcgcgttgg aaggcggcaa gggtacaatg acggacttcc
     1321 agtacgtcga tggcatcacg gtgctgccga ccgatgccga agtcttgaaa ctgcggccga
     1381 ccgaatctaa ttgatcgtga tccggcaatc aggcgcactc tccctctccc cgcaaccggg
     1441 gagagggtgg cgagccgcgt aagcggcgag ccgggcgagg gggtttgacg atgacaatct
     1501 gcctcgagtc cctcgctcga cttcctcgct cccgctcgga atctctccgc atgcgggatg
     1561 aggtaaaatg agtttcagcg gactcctgtt tcaggcgctc aacggccttt caactgcgtc
     1621 gggcctgttt tttgtcgcgg ttgggctgtc gctgatcttc ggagtttccc gcatcatcaa
     1681 catcgcgcat gggtccctct atatgctcgg gacctacatc gcctattcct ttgctacaca
     1741 tgtcggtggc gtcatcggct tctggggcgg aattgtcgct accgcgctcg tcatcggtgt
     1801 aatcggggcg ctgatcgaaa tcctgctgct tcgccgcgtg taccgcgcgc ccgaactgtt
     1861 ccagctgctc gccacgttcg cgctggttct cgtgatcaat gacgccacgc tttggatttg
     1921 gggtccagag gatctgctcg ggccgcgcgc gccgggcttg cgcgggtcga ttgaaattct
     1981 tggacgtcac ttgccgactt acgacctctt cctgatcgtg gccggtcctg ctgtgttgct
     2041 ggtgttgcac ttcgcgctcg ctcgcacccg cttcggccgc ctggtgcggg ccgccacgca
     2101 ggaccgggaa atggtgagcg ccctgggcgt caatcaggcc gtgctgttca cctcggtgtt
     2161 tgctctgggc gccgcattgg ccggtttggg tggcgcgttg caggtggcac gcgagccggc
     2221 caatctcgcc accgatctgg tggcaatcgg tgacgcgttc gtagtggtgg tggttggcgg
     2281 gatgggatcc atcaccggcg cctatctcgc cgccgtcatc attgccgaag tgaaagcgct
     2341 ctgcataggc atcggcgttg tcgattt
//
LOCUS       DATDHO010000968         2123 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_244657, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000968 DATDHO010000000
VERSION     DATDHO010000968.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2123)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2123)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2123
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_244657"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1562
                     /locus_tag="VIY07_18960"
     CDS             <1..1562
                     /locus_tag="VIY07_18960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEY6383875.1"
                     /translation="QIPIWTGDIISGFVDLALERAYVYKEYAPSEVIELKGEDLDRKK
                     EARFTMLETLADHDDQLMEQLLEDIEPPRDKVFDDLAKELRDRIVCPVLLGSATRTNG
                     VLRLLKALRHESPGVNETAQRLGVKAGNETIAVVLKTFHTTHGGKMSIARLLAGQAGD
                     GTTLTTSGGNAGRISGVFKVMGQHFEKRGQASVGETVALGKLESAKTGDTVSTGKQPA
                     AALVQLKAFPPVLAIAVHAKERKDDVKLGPAFNKLTEEDPSLSVIHNAESHEVIIWGQ
                     GEMHLRVASERLADRFLVPVATRPPSVGYRETIRKPITQRGRHKKQSGGHGQFGDVML
                     EIKPLPRGTGFKFEDRITGGVVPRNYIPAVEEGVIDGLKHGPLGFPVVDLSVALIDGS
                     YHTVDSSDQAFRTAGRIGIVEALPQCQPVLLEPIHEVEIVCPSEATAKMNAILSGRRG
                     QILGFDTREGWNGWDTVRAQMPEAEIGDLIIEVRSGTAGVGSFTFKFDHMAELTGRTA
                     DQIIAARRAAE"
     gene            complement(1666..2109)
                     /locus_tag="VIY07_18965"
     CDS             complement(1666..2109)
                     /locus_tag="VIY07_18965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YetF domain-containing protein"
                     /protein_id="HEY6383876.1"
                     /translation="MDSVIKACVVYFVLWAIIRISGRRTLGEMTAFDFILFLIIGGAT
                     QRAITGEDYSLTNALILVATFVGIEVTLSFIELKSPMLRRVLNSSPTLLVENGSPMRY
                     RMRRARVTEDNILEAARRLHGLERMDQIKFAILEPTGKITIVPMS"
BASE COUNT          466 a          603 c          653 g          401 t
ORIGIN      
        1 ggcaaattcc gatctggacc ggcgatatca tttcgggatt cgtcgatctc gcgctggagc
       61 gcgcctatgt ctacaaggaa tatgcaccgt cagaagttat agagctcaag ggtgaagacc
      121 tcgaccgcaa aaaagaagcc cgcttcacga tgctggagac gctggccgat cacgacgacc
      181 agctgatgga gcagctgctt gaagatatcg agccgccgcg ggacaaggtt ttcgacgacc
      241 ttgccaagga gttgcgtgac cggatcgtat gtcccgttct tcttggttcg gcgacccgca
      301 ccaacggtgt attgcgtctc ctcaaggcgc ttcgccatga atcgcctggg gtgaacgaaa
      361 cagcgcaacg gctgggcgtg aaggccggca acgaaacgat cgcggtcgtg ctcaagactt
      421 tccacacgac gcacggcggc aaaatgtcga ttgcccgcct tctcgccggt caggccgggg
      481 acggtacaac gctcacgacg tcgggcggga atgccggacg gatttccggc gttttcaagg
      541 tgatgggcca gcacttcgag aagcgcggac aggcgagcgt cggcgaaact gttgcgctcg
      601 gcaagctcga aagtgccaag accggtgaca cggtttcgac cggcaaacaa ccggcggcgg
      661 cgcttgtgca gctaaaggcc tttcctcccg tcctggcgat cgcagtccac gcgaaggaac
      721 gcaaggacga cgtcaagctc ggaccggctt tcaacaagct tacggaagaa gacccgtcac
      781 tctcggttat tcacaacgcc gaaagccatg aagtaatcat ctggggacaa ggcgaaatgc
      841 acttgcgcgt cgcgtcagag cgattggccg accgcttcct ggtgcctgtg gcaacacggc
      901 ctccgtcggt gggctatcgg gagacaattc gcaagccgat cacgcaacga ggcaggcaca
      961 agaagcaatc gggcggccat ggccagtttg gcgacgtcat gctcgagatc aagccgcttc
     1021 cgcgcggcac aggattcaaa ttcgaagacc gcatcacggg cggagtggtg ccgcgcaatt
     1081 acattccggc agtcgaggag ggcgtcatag acgggctcaa acatgggcct cttggctttc
     1141 ctgtcgtcga tctgtcggtc gcactgattg acggatcgta ccacacggtc gactcctccg
     1201 atcaggcgtt taggactgcc ggacggatcg gcattgtgga agcgcttccg cagtgccagc
     1261 cggtattgct tgagcccatt catgaggtcg agatcgtctg ccccagcgag gccacggcga
     1321 aaatgaacgc gatcctgtcg gggcgccggg gtcagatcct cggcttcgac acccgcgaag
     1381 gctggaacgg atgggacacg gtgcgggcgc agatgcccga ggccgaaatc ggcgatctga
     1441 tcatcgaagt gcgttccggc actgcgggag tcggctcgtt cactttcaag ttcgatcaca
     1501 tggcggagct gaccgggcgt acggccgacc agatcatcgc agcgcgccgc gccgcggagt
     1561 aatgaataaa gaatgctgca agctaggccg cgccaccaaa ggcgcggccg cgacaatttt
     1621 agtcgcttat gaaaaccctc aacaaagcgg tctatgcttt cgcggtcagg acatgggcac
     1681 gatcgtgatc ttgccggtcg gttccaggat cgcgaatttg atctgatcca tgcgttcgag
     1741 gccgtgaagc cgtcgtgccg cttcaaggat attgtcctcg gtcacgcgtg cgcgccgcat
     1801 ccgataacgc atggggctgc cattctcaac aagcagcgta gggcttgaat tcaatacccg
     1861 tcgcaacatt ggcgatttca attctataaa cgacagtgtg acttcgatcc caacgaaggt
     1921 cgcgaccaga atgagtgcgt tggtgagcga gtagtcttcg ccggtaatgg ctcgttgcgt
     1981 cgcgccgccg atgatgagga agagaatgaa atcgaaggcc gtcatttcgc cgagcgtccg
     2041 gcgtccggaa atgcgaatga tcgcccagag cacgaaatag actacgcaag ccttgatgac
     2101 gctgtccatg ttcgctcacg gat
//
LOCUS       DATDHO010000969         3276 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_444595, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000969 DATDHO010000000
VERSION     DATDHO010000969.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3276
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_444595"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..946)
                     /locus_tag="VIY07_18970"
     CDS             complement(<1..946)
                     /locus_tag="VIY07_18970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-conducting transporter membrane subunit"
                     /protein_id="HEY6383877.1"
                     /translation="MYQAIVFLPLLGAILAGIIALAGARTRFPGKGPVAGAEDTAVDH
                     GPHHGVPEVQGSGVIHSSHHEEEAREPAAAGSRTAELITTTLLMICMVLSWIAFVDVG
                     FAHHDARVPVFTWMSAGDLKVDWSLRIDTLTAVMLVVVNTISAFVHLYSIGYMREDPY
                     RPRFFGYLSMFTFAMLMLVTADNLVQLFFGWEGVGLASYLLIGYWYHKPEANAAAIKA
                     FIVNRVGDFGFALGIFAVFMLTGAIDLDTVFAQAPSLTGKTINFFGWQADALTLTCLL
                     LFMGAMGKSAQFLLHTWLPDAMEGPTPVSALIHAATMVT"
     gene            complement(954..1262)
                     /gene="nuoK"
                     /locus_tag="VIY07_18975"
     CDS             complement(954..1262)
                     /gene="nuoK"
                     /locus_tag="VIY07_18975"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEY6383878.1"
                     /translation="MIIGLGHYLTVAAILFTLGIFGIFLNRKNVIIILMSIELILLAV
                     NINLVAFSTHLGDIVGQVYALLVLTVAAAEAAIGLAILVVFYRSRGSIAVEDINLMKG
                     "
     gene            complement(1259..1876)
                     /locus_tag="VIY07_18980"
     CDS             complement(1259..1876)
                     /locus_tag="VIY07_18980"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEY6383879.1"
                     /translation="MIVALFFYLFAGICVGSAFMVIAARNPVHSVLYLILAFVNAAGL
                     FVMMGAEFLAMILIVVYVGAVAVLFLFVVMMLDVDFAELKQGALQYLPIGMLIGGIFL
                     AELVLVVGAWAIGSGVPQAITSPIPAKIPNTEAIGLVLYTRYVYFFQAAGIILLVAMI
                     GAIVLTLHHRTRVRRQDIAAQVTRTPAASIEIVKVRPGQGWGGNP"
     gene            complement(1882..2370)
                     /gene="nuoI"
                     /locus_tag="VIY07_18985"
     CDS             complement(1882..2370)
                     /gene="nuoI"
                     /locus_tag="VIY07_18985"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEY6383880.1"
                     /translation="MRLDLAAKRLFLMEFVTGFVLAMRYFFKPKATLNYPFEKGPISP
                     RFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGPRRNDGTRRATRYDIDMVKC
                     IYCGLCQEACPVDAIVEGPNFEFATETREELYYDKERLLANGDRWEREIAKNIALDAP
                     YR"
     gene            complement(2378..>3276)
                     /gene="nuoH"
                     /locus_tag="VIY07_18990"
     CDS             complement(2378..>3276)
                     /gene="nuoH"
                     /locus_tag="VIY07_18990"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEY6383881.1"
                     /translation="RRGPNVVGPWGLLQSFADLLKFVVKEPVIPAGANKGVFLLAPLV
                     TCVLALAAWAVIPVNANWVIANINVGVLYIFAISSLMVYGVIMAGWASNSKYPFLAAL
                     RSAAQMVSYEVSIGFVIITVLLCAGSLNLSAIVVAQDGKYGLFSWYWLPLFPMFVVFF
                     ISALAETNRPPFDLVEAESELVAGFMVEYGSTPYMMFMLGEYVAIGTMCAMATIMFLG
                     GWLPPLPFAPFTWVPGVIWFTLKALFMFFLFAMAKAMVPRYRYDQLMRLGWKVFLPLS
                     LAMVAIVAAVIQYGPLAQGFVK"
BASE COUNT          794 a          976 c          958 g          548 t
ORIGIN      
        1 cagtcaccat ggtggcggca tggatgaggg ctgaaaccgg ggttggcccc tccatcgcgt
       61 caggaagcca agtgtggagt agaaactgcg ccgattttcc catggcgccc ataaaaagga
      121 gcaagcaggt aagtgtgagc gcgtcggctt gccagccgaa gaaattgatc gtcttgccgg
      181 tgagcgaagg cgcctgcgcg aacacggtat ccaaatcgat cgcgccggta agcatgaaca
      241 ccgcgaaaat accaagcgcg aagccgaaat cgcctactcg attgacgata aacgccttga
      301 tcgcggcggc gttggcttcc ggtttgtgat accagtaccc aatcagcaga tagctcgcca
      361 gcccgacgcc ttcccagccg aagaacaact gcacgagatt gtccgccgtc accagcatca
      421 gcatggcgaa ggtgaacatc gacagatagc cgaagaagcg cggccggtac ggatcttcgc
      481 gcatgtatcc gatcgaatag agatgcacga aggccgaaat cgtattgacg accaccagca
      541 tcaccgcggt gagcgtatcg atgcgcaacg accaatcgac cttgaggtcg ccggcgctca
      601 tccaggtgaa taccggaaca cgcgcgtcgt gatgggcgaa gccgacatcg acgaacgcaa
      661 tccacgatag gaccatgcag atcatcagga gcgtcgtggt aatcaactcg gccgtacggg
      721 agcccgcggc ggccggctcg cgcgcttctt cttcatgatg agatgagtga ataaccccac
      781 tgccttgcac ctccggcacg ccgtggtggg gcccatgatc gacggcagtg tcctccgcgc
      841 ccgcaaccgg gcctttgccg ggaaagcggg ttcgcgcgcc ggcaagcgcg ataattccgg
      901 caaggatcgc gcccagtaag ggcagaaaga cgatggcttg gtacatgccg ttttcagccc
      961 ttcattagat tgatgtcctc gaccgcgatt gagccgcggc ttcggtagaa gaccacgaga
     1021 atggcaagcc cgattgccgc ctccgctgct gcaacggtga gaaccagcag cgcatagacc
     1081 tgtccgacga tgtcgccgag atgcgtcgag aaagcgacca ggttgatgtt gactgcgagc
     1141 aggatcaact cgatcgacat caggataatg atcacgttct tgcggttaag aaaaatgccg
     1201 aaaatcccga gcgtaaacag gatcgcagcg acggtcagat agtgaccaag accaatgatc
     1261 acggattgcc tccccaccct tggcccggcc gtactttgac gatttcgatg gaagccgccg
     1321 gcgtgcgcgt aacctgcgcg gcgatatcct ggcgccgaac gcgcgttcga tggtgcagcg
     1381 taagcacgat ggcgcctatc atcgcgacca gcagaatgat gccggcagcc tggaagaaat
     1441 agacatagcg cgtgtaaagg acgaggccga tcgcctccgt attgggaatt ttcgccggga
     1501 tcggtgatgt tatggcctgc ggcacgcccg agccgatcgc ccaagcgcca acgaccagca
     1561 ccagctcggc aaggaagatg ccgccgatca gcatccctat gggaagatat tgcaatgccc
     1621 cctgcttgag ctcggcgaag tcgacatcga gcatcatcac cacgaacagg aacaggaccg
     1681 caacggcgcc gacgtaaacc acgatcagga tcatggcgag aaattcagcg cccatcatca
     1741 cgaacaaccc ggctgcgttg acgaaggcga ggatgagata gagaaccgaa tggaccggat
     1801 tgcgcgcggc aatcaccatg aatgcgctgc ctacgcagat gccggcaaag agataaaaga
     1861 acagggcgac aatcatcgcc gttacctgta cggggcgtcg agcgcgatgt tcttcgcgat
     1921 ctcgcgttcc cagcggtcgc cgttcgcgag cagacgctcc ttgtcgtaat agagctcttc
     1981 gcgcgtctcg gtcgcgaatt cgaaattcgg accttcgacg atagcatcaa ccggacaagc
     2041 ttcctgacag agcccgcaat agatgcactt caccatgtcg atgtcgtaac gggtcgcacg
     2101 gcgggtgccg tcgttccggc ggggtccggc ctcgatcgtg atcgcctggg ccgggcaaat
     2161 tgcctcgcag agcttgcagg cgatgcagcg ttcctcccca ttcggatagc gtcgcaaggc
     2221 atgctcgccg cggaaacgcg gcgaaatggg tcccttctcg aacggataat tgagcgtggc
     2281 cttcggcttg aagaagtagc gcatggccag cacgaagccg gtcacgaact ccatcaggaa
     2341 caggcgtttg gccgcgagat cgagcctcat cgcatcctca tttcacgaag ccttgcgcca
     2401 gcgggccgta ctggatgacc gcggcgacga ttgcaaccat cgcaagcgac agcggcagga
     2461 aaaccttcca gccaagccgc atgagttgat cgtagcgata gcgcggaacc atggccttgg
     2521 ccatcgcgaa caggaagaac atgaacagcg ccttgagcgt gaaccagatc acgcccggca
     2581 cccacgtgaa gggtgcgaaa ggcaaaggcg gcagccatcc ccccagaaac atgatcgtgg
     2641 ccatggcgca catcgttccg atcgccacgt actcgccgag catgaacatc atgtaaggcg
     2701 tcgacccgta ctcgaccatg aagcccgcga ccagttcgga ttccgcttcc accagatcga
     2761 acggcggacg gtttgtctcc gcgagtgctg aaatgaagaa gaccacgaac atcgggaaca
     2821 gcggcaacca ataccagctg aacagtccat atttcccgtc ttgcgcgacg acgatcgcgg
     2881 acaggttcaa ggatcctgcg cacagcagca cagtaataat gacgaagccg atcgagacct
     2941 cgtatgagac catttgcgca gccgagcgca gcgcggccag aaacggatac ttcgaattcg
     3001 aagcccaccc ggccatgatc accccataga ccatcagcga agagatcgcg aagatgtaga
     3061 gaacgccgac gttgatattg gcgatcaccc aatttgcatt gaccggaatc acagcccagg
     3121 ctgcgagcgc cagcacgcag gtgaccaggg gcgcgagcag gaacacgcct ttgttggcgc
     3181 cggccggaat cactggctcc ttgaccacga attttagcaa atcggcgaag gattgcagca
     3241 acccccacgg acccacgaca ttcgggccgc gcctga
//
LOCUS       DATDHO010000970         2597 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_46254, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000970 DATDHO010000000
VERSION     DATDHO010000970.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2597)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2597)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2597
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_46254"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            56..556
                     /locus_tag="VIY07_18995"
                     /pseudo
     CDS             56..556
                     /locus_tag="VIY07_18995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611035.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
     gene            712..2001
                     /locus_tag="VIY07_19000"
     CDS             712..2001
                     /locus_tag="VIY07_19000"
                     /EC_number="2.5.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018697734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase"
                     /protein_id="HEY6383882.1"
                     /translation="MADAERTPGFATLSIHAGAKPDPTTGARVTPIYQTTSFVFDDVD
                     HAAALFGLQTFGNIYTRIGNPTCAVLEERVAALEGGTAGLAIASGHAAQVVVMHALMT
                     PGDELVASKKLYGGSINQFNHSYKNFGWNVVWADPDDLNSFEKAVTPKTKCIFVESIA
                     NPGGIITDIEAIAKIARKARVPLIVDNTLATPYLCKPIDYGADIIVHSLTKFLGGHGN
                     SIGGLIVDGGTFDWSRDKKYPMLSEPRPEYQGIILHETFGNFAFAIACRVLGLRDLGP
                     ALSPFNAFLILTGIETLPLRMQRHCDNTLAVAEWLSKRSEVAWVSYPGLRNDKYHSLA
                     KKYCPNGCGAVFTFGLKGGYDAGVKLVSNVKLFSHLANIGDTRSLIIHPASTTHRQLS
                     DAQKVQAGAGPDVVRLSVGLEDVEDLVADLEEGLTAA"
     gene            complement(2006..>2597)
                     /locus_tag="VIY07_19005"
     CDS             complement(2006..>2597)
                     /locus_tag="VIY07_19005"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HEY6383883.1"
                     /translation="SAGVDLKRLSGGGADYIHQFLPALHRLYEAVFFHPKPVVAAING
                     HAIAGGCVLACCADRRIMARESGRIGVTEILVGVPFPALAFEIVRLAVPPRYLAEFTL
                     FGATYATDEALRRGWIDEVAEPEDLVEDAVAVARELSLLSPPAFARTKMQIRQPAAER
                     MQASGKATDEAVTEIWTAPATLAHIRDYVERTLGKT"
BASE COUNT          580 a          787 c          726 g          504 t
ORIGIN      
        1 cagagctgga aacggaaaac gctcgtttgc gcgcagccgt cgcaagacaa aaataatgaa
       61 ccacgacgcc taccacgacg cctatatccg cgacatcctt gatacggtga agaccatcgc
      121 aatggtcgga atctcgccga aagataatcg gccgagctat tttgcattca aatatttgat
      181 ggaacgtggg taccgcatga tccccgtcaa ccccggccag gccggcggga ggatcctcgg
      241 tcaaaaagtt tatgcaaaat tatccgacat tgccgaaccg gtggacatgg tcgatatctt
      301 tcggtcctcg gagcacgcgc ttccgatcgt caaagaggca ttgacgctca atccgaagcc
      361 gcaagtcgtg tggatgcaac tgaccgtgcg caacgatgat gcggccaggc ttgcagaaga
      421 tgccggccta aaagtcgtga tgaatcggtg cccgaaaatc gaatatggcc gtctttcgtc
      481 ggaaatttcc tggatgggcg tgaactcgcg aacgctctct tcgaagcgcg cacaaacctt
      541 gggcaaaggc gtgcagcgta tgcgtctcgg cccagtgggg gataaaggac gccgctaagc
      601 ggccttaagg gcagacactg acttgacggc gcgactgtcc agccccacta atcccgccac
      661 aaaatgaacc agctgaacaa gcccacagct tctaattgaa tcgggggatc catggccgac
      721 gccgaacgca ctccgggatt tgcaacgctg tccattcacg ctggcgccaa gcctgatccg
      781 accaccggcg cgcgggtgac gccgatttac caaaccacat cgtttgtgtt cgatgatgtc
      841 gatcacgcag cggcgctgtt cggcctgcaa acctttggca acatctatac ccgcatcggc
      901 aatccgacct gcgccgtatt ggaggagcgc gtcgcggcgc ttgaaggcgg cacggccggc
      961 ctcgcgatcg cttccggcca tgccgcgcaa gtggttgtca tgcacgcgct gatgacgcca
     1021 ggggacgaac tcgtcgcgtc aaaaaaactt tatggcggat caatcaacca gttcaaccac
     1081 tcctacaaga acttcggctg gaatgtcgta tgggccgatc ccgacgacct gaattctttc
     1141 gaaaaagcag tcacgccaaa aaccaaatgc attttcgttg aatcgatcgc aaacccgggc
     1201 ggcatcatca ccgatatcga ggcgatcgcg aaaattgcgc ggaaggcccg tgtcccgctt
     1261 attgtcgaca atacgctggc aacgccctat ctgtgcaagc cgatcgacta cggcgccgac
     1321 atcatcgtgc attcgctcac gaaatttctc ggtggccacg gcaactcgat cggcgggctg
     1381 atcgtcgacg gcggcacatt cgactggtcg cgcgacaaaa aatatccgat gctttcggaa
     1441 ccgcgtcctg aatatcaggg cataatcctt cacgaaacat tcggcaactt tgccttcgcg
     1501 attgcctgcc gcgtgctcgg cctgcgcgat cttggaccgg ccttgtcacc cttcaacgcc
     1561 tttctgatcc tgaccggcat cgaaaccctg ccgttgcgca tgcagcgtca ctgcgacaac
     1621 acgctcgcag tcgccgaatg gctgtcgaag cggtccgaag tggcctgggt gagctatccc
     1681 ggccttcgca atgacaaata tcattccctt gcaaaaaaat attgcccgaa cggctgcggg
     1741 gccgtgttca ccttcggcct gaagggcggc tacgacgccg gcgtcaagct cgtgtcaaac
     1801 gtcaagctgt tctcgcacct tgccaatatc ggcgatacgc gatccctcat cattcacccg
     1861 gcttcgacaa cgcatcggca gttgtccgat gcgcaaaaag ttcaggccgg ggccggacct
     1921 gacgttgtgc ggctatcggt cggactcgag gacgtggagg atctggtcgc cgatctcgag
     1981 gagggcttga cggcggcgta agccgctagg tcttccccag cgtgcgttcg acataatcgc
     2041 gtatgtgcgc aagcgttgcg ggggcagtcc agatttccgt cactgcttcg tcggttgctt
     2101 taccgctcgc ttgcatgcgc tcggcggccg gctgacgaat ttgcattttc gttcgcgcga
     2161 aggctggcgg cgaaagcaaa gaaagctcac gcgcaaccgc cacagcatcc tcgacgaggt
     2221 cttccggctc cgccacctcg tcgatccagc cgcgccgcaa tgcttcatcg gtcgcatagg
     2281 tcgcgccgaa gagcgtaaat tccgccaggt atcgaggcgg tacggcgagg cgcacaattt
     2341 caaaagcgag tgccgggaat ggcacgccga caagtatttc tgtcacaccg atccgcccac
     2401 tctcgcgcgc catgatccgg cgatcggcgc aacaggccag cacacagcca ccggcaatgg
     2461 catgaccatt gatcgcggcc accaccggtt tcgggtggaa aaatacggcc tcataaagac
     2521 ggtggagagc gggcagaaac tgatgaatat aatcggcacc gcctccgctc aatcgcttga
     2581 ggtcgacgcc ggcggag
//
LOCUS       DATDHO010000971         3650 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_93968, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000971 DATDHO010000000
VERSION     DATDHO010000971.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3650
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_93968"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            119..1546
                     /locus_tag="VIY07_19010"
     CDS             119..1546
                     /locus_tag="VIY07_19010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007010585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6383884.1"
                     /translation="MTETLTPDICILGGGPGGLSVAAAAAAFGVPTVLIERGKMGGDC
                     LNTGCVPSKSLLAAARRAELMRNAGLFGLNVQGIGVDFAKVHDHVHSVIAALAPADST
                     ERFTGLGVRVIRQHGQFKDRNTVTAGDAEIRARRFVIATGSVPAVPPIPGLDDGPFLT
                     NENVFDLKERPEHLIVIGAGPVGLELAQAFRRLGSSVTVVEAAQPLVNDDPECVAVVL
                     DRLEREGIVIRSGVKVTGIARAGGVVTATIETSGVEQTVTGSHLLVAVGRRPQINELG
                     LEAAGIRHDHRGIIVNAKLKTSNWRVYAIGDCAAGHQALTHAANYHAGLVIRNALFRL
                     PVRADNSAIPWATYTDPELAQSGLTEAQARARRMNIRVARWPYHDNDRAQIERDSHGH
                     IKVVTTRKGKIVGATIVGAQAGELIAVWALAIARGLNIRALTNVVLPYPTLSELGKRA
                     AMDFFTPNLTKPWVRRIIGWMRIFG"
     gene            1659..3032
                     /locus_tag="VIY07_19015"
     CDS             1659..3032
                     /locus_tag="VIY07_19015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HEY6383885.1"
                     /translation="MVAEILIYVPSVANFRLNWLNDRLAAAHTAALVLDAAPSGMVPK
                     SLANEILTSIGARAVAMKMGNQRRLLAASDMPSTIAQDIDMRSWSWWTAIIDAFDMLL
                     TCKPDDVMRVVGPAPVGGDFLEVILNEAPLCKAMWTFSVNILMLSLAISCITAMLVFF
                     ALHYLLVRPMWRITGNMVAFRADPENPSRIIAESGRQDEIGTAEQELGAMQRELASML
                     HQQSRLAALGLAVSKINHDLRNLLASAQLFSDQLSTSPDPKVQRFAPKLMRALERAIA
                     FCQSTLSYGGAQEPPPERKTVELEPLIEEVYEALGLGLEVPIRWIVAVERGLTVEADH
                     DQLFRVLVNIARNAVQALETRGARDPARDQIRITGRREGSVVVIEVSDTGPGVAEKAR
                     AHLFQAFQGARAGGTGLGLAIAAELVRAHGGEIRLVPGTIGATFSISIPDRAVDLNTR
                     RGERASA"
     gene            3104..>3650
                     /locus_tag="VIY07_19020"
     CDS             3104..>3650
                     /locus_tag="VIY07_19020"
                     /inference="COORDINATES: protein motif:HMM:NF012421.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III polyketide synthase"
                     /protein_id="HEY6383886.1"
                     /translation="MRIVPPVNVLAVATKVPPNKLEQNVVVDAARKVYARTFTRYPKL
                     ADVFVNVGIERRYSVRPLEWLSAPHDLAERAKVYLEGANELFVQTARAALERAGVSAR
                     DVDVVVTVSSTGIATPSIEARVAPEMGFRPTVMRVPVFGRGCAGGVSGLALGARLARA
                     EPGEIVLVVVIELCTLACRIDR"
BASE COUNT          666 a         1045 c         1176 g          763 t
ORIGIN      
        1 ccgcggctgg tggcggcgct tgttgcgctc ggtctgctcg cgttgttgcc ggtggtggtg
       61 aaatattggc gcggacgatc acgcaccgtt acttgatttg tgattggggg cttgcagcat
      121 gacggaaaca ctaacgcccg acatctgcat actcggtggc ggtccgggtg gattgtcggt
      181 ggccgcggcc gcggccgctt tcggcgtgcc gactgtcctg atcgagcgcg gcaaaatggg
      241 cggtgattgt ctcaacaccg gctgcgttcc ttccaagtct cttctggcgg cggcaaggcg
      301 cgccgaatta atgcgcaatg ccgggctgtt tggcctgaat gttcaaggca tcggcgttga
      361 tttcgcgaaa gtacatgacc atgtgcattc ggtgatcgcg gcattagcgc cggcggattc
      421 gacggagcgt tttaccggtc tgggcgttcg tgtcatccgc cagcatgggc aattcaagga
      481 ccgcaacact gtcacggcag gcgacgccga aattcgcgcg cggcgtttcg tgattgcgac
      541 cgggtccgtg ccggctgtac caccgatccc cggtctcgat gacgggcctt ttctcaccaa
      601 tgaaaatgtt ttcgatctca aagagaggcc ggagcacctc attgttatcg gcgcaggtcc
      661 ggtcgggctg gaattggcgc aggcgttccg ccggctcgga agctcggtga ccgtagtcga
      721 ggcggcgcag cctctcgtga atgacgaccc ggaatgcgtg gccgtcgtgc tcgatcgtct
      781 tgaacgcgag ggaattgtca ttcgcagcgg tgtaaaagtt accggcattg ctcgcgccgg
      841 cggcgtcgta acggcgacga tcgaaacatc cggcgtcgag caaaccgtca ccggcagcca
      901 cctgctagtt gcggtcggcc gcaggccgca aatcaatgaa cttggtcttg aggccgcggg
      961 aattcggcat gaccaccgcg gaatcatcgt caacgccaag ctgaagacga gcaattggcg
     1021 ggtctatgcg atcggggatt gcgctgcggg tcatcaggca ctcacgcacg ctgccaatta
     1081 tcacgcaggt ctcgtcattc gaaatgcgct gtttcgcctg ccggtgcgcg cggacaacag
     1141 tgcgattccc tgggcgacct ataccgatcc tgagcttgct cagagcggct tgaccgaagc
     1201 acaggcgcga gcgcgacgaa tgaatattcg tgtcgcgcgc tggccgtatc acgacaatga
     1261 ccgcgcacaa atcgagcgag attcgcacgg tcacattaaa gtcgtcacca cgaggaaagg
     1321 taagatagta ggtgcgacga tagttggagc acaggcaggt gaattgattg cagtctgggc
     1381 gctcgcaatt gcgcgggggc tcaacatccg cgcgttaacc aatgttgtgc ttccttatcc
     1441 gacattatcg gaacttggga aacgtgcggc gatggatttt ttcaccccaa atttgaccaa
     1501 gccttgggtg cggcgcatca ttggctggat gcgaatcttc ggctgaggcc attttgtcgg
     1561 aaatcaaaac agaaccaact gaggtgcagc cagggccggc gcgaaaattg cgcgtcggcc
     1621 tctccggcaa gttgctgttg cttaccatcc tgttcgtgat ggtggcggaa attttgattt
     1681 atgtgccttc ggtcgccaac ttccgtttga actggctgaa cgatcggctg gctgccgccc
     1741 acacggcggc cctcgtgctc gacgccgcgc caagtggaat ggtgccaaaa agcctggcga
     1801 acgaaattct cacgagcatc ggcgcgcgcg cggtggcgat gaagatgggc aatcagcgtc
     1861 gattgctcgc cgcctccgat atgccctcga cgatcgcgca agacatcgac atgcggagtt
     1921 ggtcgtggtg gaccgcgatt atcgacgcat tcgatatgct gctcacttgc aagcctgatg
     1981 acgttatgcg ggtggttggc ccggcgcctg tgggcggcga ctttcttgag gtcattctta
     2041 acgaggcgcc gctctgcaag gcgatgtgga cgttctcggt gaacatcctg atgctgtctc
     2101 tggctatctc gtgcatcaca gcgatgctcg tgttcttcgc tctgcattac ctcctggtgc
     2161 ggcccatgtg gcgtatcacc ggtaacatgg tggcctttcg ggcggatccg gaaaacccgt
     2221 cgcgcatcat cgccgaaagt ggtcggcagg atgagattgg cacggccgag caggagctcg
     2281 gcgccatgca gcgcgagctc gcctcaatgc tccaccagca gagccggctc gcggctcttg
     2341 gccttgcggt gtcgaaaatc aatcatgacc tgcgcaacct gttggcctct gcgcaactct
     2401 tctccgacca gctttccacg tcgcccgacc ccaaggtgca gcgctttgct cccaagctga
     2461 tgcgtgcgct cgaacgcgcg atcgcgttct gtcagtcaac gctgtcttac ggcggggcac
     2521 aggaaccacc accggagcgc aaaaccgtcg agctcgaacc gttgatcgag gaggtctacg
     2581 aagcgcttgg tcttggtctt gaggtgccga tccggtggat cgttgccgtg gagcgcggtc
     2641 tcacggtcga ggccgatcac gatcagttgt tccgcgttct cgtcaacatt gcgcgcaatg
     2701 cggtgcaggc gctggagacc cgcggtgcac gcgatcccgc tcgcgatcaa atccgcatta
     2761 ccgggcgaag agaaggcagc gtcgtggtca tcgaggtgtc ggataccggg ccgggcgtag
     2821 ctgagaaggc tcgcgcacat ctattccagg catttcaggg ggcgcgcgcc ggcggaaccg
     2881 gacttggcct tgccatcgcc gcggagttgg ttcgtgcgca cggtggcgaa atccgcctgg
     2941 tgccggggac tattggcgcc acgttcagca tctccatccc tgaccgggcg gtcgacctga
     3001 atacacgacg tggtgaacgc gccagcgcct gaagccggga agagctcaca gcctgtggtg
     3061 ttcttcgcat aggggcgacg gtcgcaagtt ttacgaaaag gatatgcgta ttgtgcctcc
     3121 ggtaaacgta cttgcggttg ccaccaaggt accaccgaac aagctcgagc agaacgtggt
     3181 cgtggatgct gcgcgcaagg tctatgcgcg cacattcacg cgttacccga aactggccga
     3241 tgtatttgtc aatgttggca tcgagcggcg ctattcggtg cgaccgctgg agtggttaag
     3301 cgcgccgcac gatctggcag agcgcgccaa ggtctatctc gagggcgcaa acgaattgtt
     3361 tgtgcaaacg gcgcgcgccg ccctcgaacg tgcaggagtc tccgcgcgcg acgtcgatgt
     3421 tgtcgtgacg gtttcgtcga cgggtatcgc gacgccgagc attgaagcgc gcgtggcgcc
     3481 ggaaatggga tttcggccaa cggtcatgcg cgtcccggtc tttggacggg gctgtgcggg
     3541 tggcgtctcc ggactggcgc tcggtgcccg gctcgcgcgt gccgagccgg gcgagatcgt
     3601 cctcgtggtg gtgatcgaac tgtgcacgct ggcttgccgc atcgaccgtg
//
LOCUS       DATDHO010000972         4496 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_346176, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000972 DATDHO010000000
VERSION     DATDHO010000972.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4496
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_346176"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            66..1910
                     /locus_tag="VIY07_19025"
     CDS             66..1910
                     /locus_tag="VIY07_19025"
                     /inference="COORDINATES: protein motif:HMM:NF017081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HWE histidine kinase domain-containing protein"
                     /protein_id="HEY6383887.1"
                     /translation="MWLFVLVGVAYFLAARLSLLLLTKPDGVAVFWPASGIAAGALIA
                     LGPGARLPVAAGAAVATIVANLLGDRTFMGAVVFAVCNAGEALLAGWLIQRYFGPTFS
                     LDRLSHVLGLLGAATVAAAISGMGGTAGFLYFHSSTAPILATWQHWFASDALGILTVA
                     PLMIELASAAREAPRRRELVEGIVALVALGWVSGFAILLPQGHWGIVVPIAALFPLLL
                     WISARCRPIFAAAAAFIIAFTLVWMTTFGIGYLGDPAIPIEHRILGAQASILAISLCA
                     LVLASLFAERRHHEAALLEGQTRLQEALTAGGVMAFDWNARTNSSQRSDNAAQILGFD
                     SKHGFSAAEFLERVHPHDRSQFKELVHSVRPEKPSYRMIFRFGCPDGRQIWLEESSSA
                     EFDSTGRCVRLKGLTLDITERKQSDERPGLLIAELDHRVKNLLARVAVISAYTRQGST
                     SIDQFVEVLDKRIQSMANAHSLLSQNRWSGVNLADLVHNQLAPYATMANTMIGGPDVT
                     LTPATTQAVAMALHELVTNAVKYGALSSPNGHVSVNWDHYQHDGGPPQVKIEWHETGG
                     PVVAAAPKVGYGTNLIRELIPHELGGTVNLAFATEGVRCEINVPIDQR"
     gene            complement(1920..2321)
                     /locus_tag="VIY07_19030"
     CDS             complement(1920..2321)
                     /locus_tag="VIY07_19030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEY6383888.1"
                     /translation="MTVVNGGDAHAREPSNLRGMRILLVEDSWQLGIALKSLLRSFDA
                     EVDGPVATTMDAEHLIAQHVPDAAVVDINLRQGERSYGLIDRLIGQGVPVVVTSGYSD
                     LPMVPAKAHILEKPISEEKLIAILRSVADTH"
     gene            complement(2460..2738)
                     /locus_tag="VIY07_19035"
     CDS             complement(2460..2738)
                     /locus_tag="VIY07_19035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383889.1"
                     /translation="MPRFGIPRLESDEQVNKAMQVNWRRGLLRIWLLVSAAWIMGWAV
                     YLILYGIQGGFRSSGEFLALPVLLLGPPIALLLFGLVAGWAFRGFKPE"
     gene            2930..3307
                     /locus_tag="VIY07_19040"
     CDS             2930..3307
                     /locus_tag="VIY07_19040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383890.1"
                     /translation="MSRVSCKTGARRIVIGLALAGLAICSVSTAKAGDLDPLYGARPY
                     GVPVERDAFCRILLERRVDPYGREIVHRIRICDEGPVYSGPNWSVAPQEYGYPSRRYY
                     EPAPSYHYSYPRPPAPVGPTYYN"
     gene            3619..4014
                     /locus_tag="VIY07_19045"
     CDS             3619..4014
                     /locus_tag="VIY07_19045"
                     /inference="COORDINATES: protein motif:HMM:NF015298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEY6383891.1"
                     /translation="MTAIKPVAVAVLVSVLTLPSANAAGWGSIHRYVKRSGNCAGQEV
                     LASYYSSGKRTSSGERFDASGNTAAARTWPLGTTLTVTNPHNGRSIVVRINDRGPWGI
                     AYRMGARLDLAKGAAQRLGMRASQYVCVA"
     gene            complement(4146..4382)
                     /locus_tag="VIY07_19050"
     CDS             complement(4146..4382)
                     /locus_tag="VIY07_19050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383892.1"
                     /translation="MIKTSIDSDLVRLRQFLNRLEADAQIAVGDVDLGGQEIESLKRE
                     IAYIEGILNGDPRCGSRAFLFQIPIDFGSSRRAL"
BASE COUNT          931 a         1307 c         1270 g          988 t
ORIGIN      
        1 tatcggcgca tgctcctggc cacctgtctg tcgttcgtcg atcaagacag cagtgggcta
       61 gttctatttg gctatttgtc cttgttggag ttgcgtactt ccttgcagct cgactaagtc
      121 ttcttttgtt gaccaaaccc gacggcgtgg ccgtgttctg gccggcttca gggatcgccg
      181 cgggtgccct gatcgcactg ggaccgggcg cgcggttgcc agtggcagcc ggcgccgcag
      241 ttgcgacgat cgtggccaac ttgttgggcg accggacatt catgggcgcg gtcgtcttcg
      301 ccgtgtgcaa tgctggcgaa gcgctgctcg cgggatggct gatccaacga tatttcggtc
      361 cgacatttag tctcgaccgc ctgagtcatg tactgggctt gctgggtgcg gccaccgtcg
      421 cggccgccat ctcgggaatg ggcggaacgg caggattctt gtacttccac agctcgaccg
      481 caccgatttt ggcaacgtgg caacactggt tcgcttccga cgcgctcgga atcctcactg
      541 tcgcaccgct aatgatcgaa cttgcttcgg cagcgcggga ggcaccgcgg cggagggagc
      601 ttgtcgaagg catcgtagcc cttgtggcgc tgggctgggt aagcggattt gccattcttc
      661 ttccgcaggg ccattgggga atcgtcgttc ccatcgccgc gctgttccca ctgttattgt
      721 ggatctcggc ccgctgtcgc cccatcttcg ccgctgcggc cgccttcatc attgcgttta
      781 cattggtctg gatgaccaca tttggtatcg gctatctcgg cgatcccgct atcccgatcg
      841 agcatcgcat tctgggtgcc caggcgagca tccttgccat ctcgctctgc gcactcgttc
      901 ttgcttcgct tttcgcggag cgccgtcacc acgaggctgc actcttggag ggtcaaaccc
      961 ggcttcagga agcgctgacc gccgggggag tgatggcctt tgactggaat gcccggacca
     1021 actcgtcgca gcggagcgac aacgcagcgc aaattttggg cttcgattca aagcatggat
     1081 tttctgccgc cgaattcctc gaacgggttc atccccatga ccgctcgcaa ttcaaagaac
     1141 ttgttcattc agttcgtccc gaaaagcctt cctacagaat gatttttcgc ttcggatgcc
     1201 ccgatgggcg acaaatttgg cttgaggaat cttccagcgc ggaatttgat tcgacgggtc
     1261 gctgtgtacg tctgaaggga ctgactcttg atattacgga gcgcaagcaa tcggacgagc
     1321 gcccggggtt actgatcgcg gagctcgacc atcgcgtgaa gaaccttttg gcgcgagtag
     1381 ctgtaatcag cgcgtacacc cgtcagggca gcacctcgat cgaccagttt gtcgaagtgc
     1441 tcgataaacg cattcaatca atggcaaatg cacattcact gctcagccaa aatcgctgga
     1501 gcggcgtgaa tctcgccgac cttgttcata atcagctggc gccttacgcg acgatggcaa
     1561 acacgatgat cggtggtccc gacgtcacgc tcactccggc aacaacccag gcggtggcga
     1621 tggcccttca tgagctcgtg acgaatgctg ttaaatacgg cgcgctgtcg agtccaaatg
     1681 gtcatgtctc ggtgaattgg gatcactacc aacacgacgg cggaccgcct caggtgaaaa
     1741 tcgaatggca tgaaacaggc ggcccggtgg tggccgctgc gcccaaagtc ggctatggca
     1801 ccaatctcat acgcgaattg atcccgcacg aactcggcgg aacggttaat cttgccttcg
     1861 caacggaagg cgtgcgctgc gaaatcaatg tcccgatcga tcagagatga gaaagaagct
     1921 tagtgagtat cggcaacgga gcgcaaaatc gcgatgagct tttcctcgct gataggcttc
     1981 tcgaggatat gtgctttcgc cggaaccatc ggaagatccg aatagcctga cgtcacgacg
     2041 acaggcacac cttggccgat cagtcggtca ataaggccat acgaccgctc gccctgccga
     2101 agattgatgt cgaccactgc ggcatccgga acgtgctggg caatcagatg ctcggcgtcc
     2161 atcgtggtgg caactggtcc atccacttcg gcgtcgaaac tacgaagcag acttttcaag
     2221 gcaatcccga gttgccagga atcctcgacc aggagaatgc gcattccgcg cagattcgac
     2281 ggttcacgcg catgcgcgtc gccaccattc accacggtca tcggaaatcc caacgcaacg
     2341 aaggctgccg tcctcgaagt ccaaactatc gcaccgcatt ttcgagttag caacccgcgc
     2401 cttgcgcgaa ggtggccgat tgcgctctgc tacaaccgga aatgacgaga tcttggcccc
     2461 tattctggct tgaagccacg aaaagcccat cccgcgacca atccaaacag cagcagggca
     2521 atcggcggcc cgagcaaaag aactggaagc gcaagaaatt cacctgagct tcggaaaccg
     2581 ccctgtatgc cgtacaaaat cagataaacg gcccatccca taatccaggc agcggacacg
     2641 agcagccaga tccgcaatag tccgcggcgc caattgacct gcatggcctt gttgacttgc
     2701 tcatcggatt cgaggcgagg aattccaaaa cgcggcatcg ccagtattcc cttatgcgcg
     2761 ttcgttaagg ccgttatgtc ccgggcacca acgcaggtcc ccggaccgtg ttccgtcatg
     2821 tgtgccagtt tggcacgccg aaggacacta aagcgccgct aacagaagac accattggcg
     2881 cgaaccggat atgacaaaaa tccgggcacc gactaacagg gagagtacca tgtcacgcgt
     2941 gtcgtgtaag actggtgcgc gccgcatcgt catcggactg gcgcttgctg gcttggcgat
     3001 ttgttcggtt tccactgcaa aggctggtga ccttgatcct ctatacggcg cgcgcccgta
     3061 tggcgtgccc gtcgagcgcg atgcgttttg ccgtattctt ctcgagcggc gggttgaccc
     3121 ctacggacgc gagatagttc accgaattcg aatatgcgat gagggtccgg tctattccgg
     3181 gccgaactgg tccgttgcac ctcaggaata cggttatccg tcgcggcgat actacgagcc
     3241 ggctccttcg taccattact cgtatccgcg cccgccggca ccggtcggcc cgacttacta
     3301 caactagggc agcgccaata gccgttgcag cgacatcgat ctgactcgcg tttgcttttg
     3361 cgatctttgt gagtgcccga gcgagggtgc gttgtgtcga gcacttcgcc cctccccggg
     3421 atcgagtgtc aattttgctg ttcagtttgt ttgagtaccg ccgccgaatg tctcttgtgc
     3481 cgccgagcgt cgttacagca accttgcctt cgttctgcca tttttggccg tacttagcta
     3541 gcttttgaag gattgagtcg gcggaccact tgccgcctgt atatgtgtga gggcacgatc
     3601 gcatttcagg ggacctaaat gacagcaatc aagcctgtag ccgttgcagt cctggtcagt
     3661 gtattgacct tgccatccgc aaacgcagcc ggatggggtt caatccatag atatgtaaag
     3721 cggtccggca actgcgcagg acaggaagtt ctggcgagct actattcatc aggaaagcgg
     3781 acatcgagtg gcgaacgttt cgacgcgagt ggcaacaccg ctgcggcgcg aacctggccg
     3841 ctcggaacga ctctaaccgt tacgaatccg cataacggcc ggtcgattgt cgtcaggatc
     3901 aatgacaggg ggccttgggg aattgcgtat cgcatgggcg cacgccttga tctcgcgaaa
     3961 ggcgccgctc aacgcctcgg catgcgtgcg tcgcaatacg tttgcgttgc ttaacatcgc
     4021 cgtcgcaccc tgaaatctct gcttgctgtc aaagcaagca gagatgagtg tcattgcgaa
     4081 catcgcactt ggttggtgtc cgcgcacgca atgagtttgc aacgtattga agtcggaagc
     4141 ccagattaca gggctcgccg cgaggaaccg aagtcgatcg gaatctggaa caggaatgcc
     4201 ctcgatccgc agcgcggatc accgttaaga atgccttcaa tgtacgcgat ttcgcgtttc
     4261 aggctttcga tctcctggcc gccaagatca acatcgccga ccgcaatctg cgcatcggct
     4321 tctaaccggt tcaaaaactg ccggagacgg accagatccg aatcgataga cgtcttaatc
     4381 atacctccaa tgatagcggc tcgccggcga gcgaaaagta gttatccact tgaaacctcg
     4441 ccggcggctg cccgtcggaa cagaaagttg tgaatttctg ttccgatcga tggctt
//
LOCUS       DATDHO010000973         5609 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_296728, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000973 DATDHO010000000
VERSION     DATDHO010000973.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5609)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5609)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5609
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_296728"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..848)
                     /locus_tag="VIY07_19055"
     CDS             complement(<1..848)
                     /locus_tag="VIY07_19055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY6383893.1"
                     /translation="MMRQYDLIERVRRYNPDTNEALLNRAYVYAMKAHGEQRRASGDP
                     YFSHPIEVAAILTDLKLDDATIAAALLHDTIEDTEATRAEIDSLFGRDIGTLVEGLTK
                     LKKLDLVTKEAKQAENLRKLLLAIADDVRVLLIKLADRLHNMRTLGYMPPEARRRVAE
                     ETLDIYAPLAGRMGMHEMREELDDLAFRELYPEAYDVVTARLNALTERSKVLISEIEK
                     QLAKKLADRGIDARVVGRRKRAYSIWRKMERKSVGFEQLSDIFGFRVIVKTQPDCYQA
                     LGVVHST"
     gene            complement(1123..1518)
                     /gene="rpoZ"
                     /locus_tag="VIY07_19060"
     CDS             complement(1123..1518)
                     /gene="rpoZ"
                     /locus_tag="VIY07_19060"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEY6383894.1"
                     /translation="MARVTVEDCIDKVENRFDLVLLASHRARMISSGSQITVERDNDK
                     NPVVALREIAETTVSPGDLKEDLIHSLQKYVEVDEPEPEVPLIGAGAGASVDSDDTEV
                     TADRMTEEELLKGLEGLAPPEEPPEEEAE"
     gene            1825..2496
                     /locus_tag="VIY07_19065"
     CDS             1825..2496
                     /locus_tag="VIY07_19065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEY6383895.1"
                     /translation="MTVPGEKIALFIDGANLYATAKSLGFDIDYKRLLREFQGRGYLL
                     RAFYYTAVIEDQEYSSIRPLIDWLDYNGYSVVTKATKEFVDQTGRRKVKGNMDIELAV
                     DAMEIAGTIDHMVLFSGDGDFRSLVEAVQRRGVRVTVVSTVSTQPPMVADELRRQADV
                     FLDIVELQTKIGRDPSERPPREARPPRDDRAASHTPQFLQRSPTSPQRAGAHVGADDD
                     DESFE"
     gene            2588..3280
                     /locus_tag="VIY07_19070"
     CDS             2588..3280
                     /locus_tag="VIY07_19070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEY6383896.1"
                     /translation="MAGADGKPGRDCPRCPRLVEFRKTWRAKEPIWFNSPVPSFGPID
                     ASVLIVGLAPGLQGANRTGRPFTGDYAGVLLYDTLLKFGFARGNYGAHPDDGLELIGC
                     RITNAVRCVPPENKPTPEEVRTCRDFLAPTIAEMVNLRAIVALGRVAHETTVRALGGK
                     LSDITFGHGGRHQLGPVMLFCSYHCSRYNTNTGVLTPQMFREVFKNVRAYLGGRSQAI
                     TSSAFLSGGKTG"
     gene            complement(3214..3792)
                     /locus_tag="VIY07_19075"
     CDS             complement(3214..3792)
                     /locus_tag="VIY07_19075"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEY6383897.1"
                     /translation="MTEAPGTHNPQFLPPDIPVPQDDGAASHLTGMKLPDLALPATDG
                     PPVNLSKLKGRTVVYVYPRTGVPGVDPPDGWDQIPGARGCTPQSCSFRDHFEELRRLG
                     VAQLFGLSTQDTAYQQEAASRLHLPFPILSDQDLAFARALKLSTFATAGMTLLRRMAL
                     IIDDGTISKVFYPVFPPDKNAEEVIAWLRPPR"
     gene            complement(3789..4178)
                     /locus_tag="VIY07_19080"
     CDS             complement(3789..4178)
                     /locus_tag="VIY07_19080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007568863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6383898.1"
                     /translation="MLSIKLDRCVIHVADWDSSNRFYSEVMGAELVRRPVGWAYRFGD
                     KQLNVHGPGVTPAEVARLPVQPGNSDLCFEWQGPIEGAIAHLKAHGIQVERGPLQRFG
                     AKGPGTSVYFRDPDGSLMEFMSYGDSK"
     gene            4282..4794
                     /locus_tag="VIY07_19085"
     CDS             4282..4794
                     /locus_tag="VIY07_19085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006801 - superoxide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEY6383899.1"
                     /translation="MRIIQLIFGVLMLMAAASLPAAAQTASAALKNADGKDVGTARLT
                     QTPAGVLIQLSVKGLPAGEHAFHVHAVGKCEPPFTTAGGHFNPTGKKHGMMAAEGQHA
                     GDMPNLHIPASGELAVEVLNAAVTLEKGKPNSLFDADGSAMVIHASKDDYKTDPTGEA
                     GGRIACGVVQ"
     gene            complement(4858..5331)
                     /gene="smpB"
                     /locus_tag="VIY07_19090"
     CDS             complement(4858..5331)
                     /gene="smpB"
                     /locus_tag="VIY07_19090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEY6383900.1"
                     /translation="MAAKPERRLKVVADNRKARFNYAIGDTFEAGIVLTGSEVKSLRA
                     GRATIAESYADARGGELWLINSNIPEYLQASRFNHAPKRARKLLLQKREINRLVGAVE
                     REGMTIVPLKLYFNEKGRAKIEIALARGKKLHDKRETLKKRSWERERGRLMRMKG"
     gene            complement(5350..>5609)
                     /locus_tag="VIY07_19095"
     CDS             complement(5350..>5609)
                     /locus_tag="VIY07_19095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MscL family protein"
                     /protein_id="HEY6383901.1"
                     /translation="DFSNYYIPLSSKVTATTLAEAKKEGAVLAWGNFLTITLNFIIIA
                     FVLFLVIRAINQISRKEAEKAPPLTLTEQLLTEIRDQLKSR"
BASE COUNT         1081 a         1683 c         1670 g         1175 t
ORIGIN      
        1 gtactgtgca cgacgccgag cgcctggtag cagtcgggct gtgtcttcac gatgacgcga
       61 aatccgaaga tatcggacag ctgctcgaaa ccgacggact tccgttccat tttccgccag
      121 atcgaatagg cccgcttgcg ccgtccaacg acgcgggcgt cgatgccccg atcggccagt
      181 ttttttgcga gttgtttttc gatttccgag atcagcacct tgctgcgctc ggtgagcgcg
      241 ttgagccgcg ccgtcaccac gtcataggct tcgggataaa gctcgcggaa tgcgagatcg
      301 tcgagctcct cgcgcatctc gtgcatgccc atgcggcctg cgagcggcgc gtagatatcg
      361 agagtctctt cagcaacacg gcggcgggct tcgggcggca tatagccaag ggtccgcatg
      421 ttgtgcagtc tgtcggcaag cttgatcaac agcacccgca cgtcgtcggc gatggccagc
      481 agcagcttgc gcaggttctc tgcctgtttg gcttccttgg tgacgaggtc gagcttcttc
      541 agtttggtca ggccttcgac cagcgtgccg atgtcacggc cgaacagact gtcgatctcc
      601 gcgcgagtgg cctcggtatc ctcgatggtg tcgtgcagga gcgccgcggc gattgtggcg
      661 tcatcgagct tgaggtcggt gaggatcgcc gcgacctcta tcggatgcga gaaataggga
      721 tcgccagaag ctcggcgctg ctcgccatga gccttcatgg catagacgta ggcgcgattg
      781 agcagcgcct cgttcgtgtc cggattgtaa cgccgcaccc gctcgatcag atcgtactgc
      841 ctcatcatcg gcagctttct cgataaagcc ggccgatcgg ccgcctgcgt tggggcggca
      901 acaggggcag cacgcggcgc cctgatcggg gcctgtttct gcatgcgcgg aaggtctgaa
      961 cgcgttcgcg ccatatctcc tgcctcgcgg ctgctcctgc gaattaccac ctcaaaatat
     1021 catgccgttt catcatgccg gcaaggcttt acccattcat aaacagccaa cggcccagct
     1081 tttggccggg ccgttgcgca caattaatgc aaaatcgaac gattattctg cttcttcttc
     1141 cggtggctcc tccggagggg cgaggccttc caggcccttc aggagctctt cctcggtcat
     1201 acggtccgca gttacctctg tgtcgtcgga gtcgacgctc gcgccggcac ctgctccgat
     1261 caatggcact tcgggctcgg gctcgtcgac ctcgacatat ttctgcaggc tgtgaataag
     1321 gtcttccttc agatcgccgg gggaaaccgt cgtttccgca atttcgcgca acgccacgac
     1381 cgggtttttg tcgttgtcgc gctcgacggt gatctgcgag ccggacgaaa tcatgcgcgc
     1441 tcgatggctg gccaggagca cgaggtcgaa acggttctca accttgtcga tgcaatcttc
     1501 tacggtgaca cgggccattg gctcgccact ccatctggtg gaacttgtcc tgaatttgcc
     1561 cgctaggtat cctcttgggc acggaatttc aagcactttt gtcttggttt agccgcaacc
     1621 gtctgttact cgacgaattg acgagatcgc aggaagccga tggcgcggga ttttatcggc
     1681 actgcgtgat tgcgcaggcg gcgaaccatt cattggagag gccgcaatgc ccagctaacg
     1741 gcgatctaag tcgcgcgcac ggcgcattct gcgcccgcgc ggccgggatt tgaaagtaac
     1801 tttaatgatt tgtgagaacg agccatgacc gtcccgggcg aaaaaatcgc tttattcatt
     1861 gatggcgcca atctctacgc gaccgcaaag tctcttggct tcgatatcga ctacaagcga
     1921 ctgctgcgtg agtttcaggg gcgcggctat ctgctgcggg cgttctatta cacggcagtg
     1981 atcgaagacc aggaatattc ctcgatccgt ccgctgatcg attggcttga ctacaacggt
     2041 tattcggtcg tcaccaaggc gaccaaggaa ttcgtcgacc agacaggacg ccgcaaggtc
     2101 aaaggaaaca tggacatcga gctcgccgtc gatgccatgg aaatcgccgg cacgatcgac
     2161 cacatggttc tgttttccgg cgacggagat tttcgctcgc tggtcgaggc cgtgcagcgc
     2221 agaggcgtac gcgttaccgt cgtctcgaca gtatccacgc agcccccgat ggtcgccgac
     2281 gaactgcgcc gtcaggccga cgtattcctc gacatcgtcg agctgcagac caagattggg
     2341 cgtgatccgt ccgaacgtcc cccgcgagaa gcgaggcccc cgcgcgatga tcgcgccgcc
     2401 tcccatacgc ctcagtttct gcagcgctcg ccgacctcgc cacagcgcgc cggcgcgcat
     2461 gtgggggcgg acgacgacga cgaatccttc gaatagctgt gtagcgtttt tgctttgtgc
     2521 gtgatttcat ccgaattggt gtcgatcccc catcggggtc gatgagaagc ttttcgggat
     2581 cacgtgcatg gccggggccg acggaaagcc tgggcgcgac tgtccgcgct gcccgcggct
     2641 tgtggaattc cgcaagacct ggcgcgccaa agaaccaatc tggtttaatt cgccagtgcc
     2701 ctcctttggg cccatcgatg caagtgtatt gatcgttggc cttgcgcccg ggctgcaggg
     2761 cgcaaatcgc accggccgcc cgttcaccgg cgattacgcc ggcgtcctgc tctacgacac
     2821 gctgctcaag ttcggctttg cccggggcaa ttacggcgcg catcccgacg atggactgga
     2881 actcatcgga tgtcggatca ccaatgcggt gcgctgcgtg ccgcccgaga acaagccgac
     2941 gccggaggaa gtaagaacgt gccgcgactt cttggcgccg acgattgcgg agatggtaaa
     3001 cctccgcgcc attgtcgccc ttggccgcgt tgcgcatgag accacggtgc gcgcgctcgg
     3061 cggcaagctc tccgacatca ccttcggaca cggcggccgg caccaacttg gtccggtgat
     3121 gctgttttgc agctatcact gctcccgcta caacacgaac acgggcgtgc tcacgccgca
     3181 gatgtttcgc gaggtattca aaaacgtgcg cgcctacctg ggcggccgaa gccaggcgat
     3241 cacctcctcc gcgttcttgt ccggcgggaa aaccggatag aaaaccttgc taatggtgcc
     3301 atcgtcgatg atgagcgcca tgcgcctgag cagagtcatc cccgcggtcg caaacgtaga
     3361 tagcttaagc gccctggcaa acgcgagatc ctgatccgaa agaatgggga acggcagatg
     3421 caggcggctc gccgcctcct gctgataggc ggtgtcttgc gtggacaggc caaatagctg
     3481 agctacgcca agccggcgga gctcctcgaa atgatcgcga aatgagcacg attgtggcgt
     3541 gcagccgcgc gcgcccggga tctgatccca gccatccggc ggatcaacgc caggcacgcc
     3601 cgtccgcgga taaacgtaga cgacagtgcg gcccttcagc ttcgaaagat tgaccggagg
     3661 gccgtcggtt gccggcagtg caaggtcggg cagtttcatg ccggtcagat gagacgcggc
     3721 gccatcatcc tgcggtaccg gaatgtcagg cggcaggaat tgcgggttat gggtgcccgg
     3781 ggcttcggtc atttcgaatc tccatagctc ataaattcca tcagcgagcc atcgggatcg
     3841 cggaagtaga ctgaagtacc cgggcccttg gcgccgaaac gttgcagcgg tccgcgctcg
     3901 acctgaattc catgtgcctt gagatgcgcg attgcgcctt cgatcgggcc ttgccattcg
     3961 aagcaaagat cgctgttgcc cggctgtacc ggcagcctcg caacctcagc cggcgtcacc
     4021 cccggcccgt gcacattgag ctgcttgtcg ccaaatcgat aggcccagcc gaccggccgc
     4081 cggaccagtt ccgcacccat cacctcgctg tagaacctgt tggaactgtc ccaatcggca
     4141 acatgaataa cgcaacgatc gagtttgatg gatagcatgt cattgatcct gaagcattaa
     4201 tcatggcacc gtgatcttcg gttgcctgac cgccaaatac tatatgcttg gaaccttcag
     4261 agaaacgtac aggggggaag catgagaatc attcaactca tcttcggcgt cttgatgctc
     4321 atggcggcag catctctgcc ggccgcggcg cagacggcta gcgcagcgct gaagaatgcc
     4381 gatggcaagg acgtcggaac ggcccgactg acgcaaacac cggccggcgt attaatccag
     4441 ctctccgtca aaggattgcc ggcaggcgag cacgcttttc acgttcatgc ggtcggcaaa
     4501 tgcgagccgc ctttcaccac tgccggcggg catttcaatc cgacaggcaa gaaacacggg
     4561 atgatggcgg cggagggaca acatgccggc gacatgccga acctgcatat tccggcaagc
     4621 ggcgaactgg cggtcgaggt cctgaatgcc gcggtcaccc tcgagaaagg caagccaaat
     4681 tctctgttcg atgcggacgg ctcggcgatg gtcattcatg ccagcaagga tgactacaag
     4741 accgacccga ccggcgaagc cggcggacgt atcgcctgtg gggtagtcca gtaagctgat
     4801 gcaaaggcgc ggcggaccag cgcgtccgac gcatgcgccg cgcctcttcg tttagcgcta
     4861 gcctttcatg cgcattagtc gcccgcgctc gcgctcccat gagcgcttct tgagcgtttc
     4921 gcgcttgtcg tgcagtttct tgccgcgcgc gagggctatc tcgatcttgg cccgcccctt
     4981 ttcgttaaag taaagcttta gcggtacgat cgtcatgcct tcgcgctcga cggcacccac
     5041 caggcgattg atctcgcgct tctgcagcaa cagcttgcgg gcgcgtttgg gcgcatgatt
     5101 gaagcggctt gcctgcagat actccggaat attcgaatta atgagccaca gttcgccgcc
     5161 gcgtgcgtcg gcataggatt ccgcgatcgt ggccctgccc gcgcgcaacg attttacctc
     5221 gctccccgtg agcacgatgc cggcttcaaa ggtgtcgccg atcgcatagt tgaaccgcgc
     5281 cttgcgattg tcggcgacca ccttcaagcg gcgctcgggt tttgcggcca tgggatttcg
     5341 ggcttcaggt cagcgcgatt tcagttggtc gcggatctcg gtgagaagtt gctctgtcaa
     5401 tgtgagtggc ggagctttct cggcttcctt acgcgaaatt tgattgatgg cgcgaatgac
     5461 caggaataac acaaacgcaa tgatgataaa gttaagcgtg atggtgagaa aatttcccca
     5521 ggccaatact gccccttcct ttttcgcttc ggccagtgtc gtggcggtaa ccttcgatga
     5581 cagggggata taatagttcg aaaagtcga
//
LOCUS       DATDHO010000974         2412 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_489772, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000974 DATDHO010000000
VERSION     DATDHO010000974.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2412)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2412)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2412
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_489772"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            136..591
                     /locus_tag="VIY07_19100"
     CDS             136..591
                     /locus_tag="VIY07_19100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383902.1"
                     /translation="MPKAFSHTITTAAAAVSILSASSAGAETLFHRAENQVPVAIVQI
                     DRTSAHTEIRLQAQAALTKVCFAAIGPNSPYLLASGRNYRYLGGDNVSTCPERRDYAA
                     GDVLVLRFEPLAAGNSTFSFVSGQGGEKQSIDAVAPNTPYWNFIRVRLN"
     gene            600..1307
                     /locus_tag="VIY07_19105"
     CDS             600..1307
                     /locus_tag="VIY07_19105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383903.1"
                     /translation="MSALSLSFIAFLCIFGATLLGVYLRQVLPTHHLSTDTKETVRLS
                     MGVIGTMAALVLSLLIASAKSSYDAKTNQIKQLTVNIIVIDQLFAQYGPETYTLRDLL
                     RRGAAALADKIWSERDLATATMTAFAMSAEAEAFLRRVEELKPQTETQRALQARAITA
                     ITDLAQTRLLLYAQAENSIPLPFLVLLISGSPLSLAASVCSLRQTLLSSRHFSFVPSR
                     HRVRFFLFSSWSRHSLD"
     gene            1407..>2412
                     /locus_tag="VIY07_19110"
     CDS             1407..>2412
                     /locus_tag="VIY07_19110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEY6383904.1"
                     /translation="MPVLPRVKDYDTLYRQFRWQVPARYNIGVDVCDRWAGKDPDRLA
                     IIHARPDGHDDHITYGWLRETSNRLANVLHTHGVTRRDRVAILLPQSSEVAAIHVAIY
                     KLGAIALPLAVLFGVDALSYRLQNSGAVALITNARGVERIAEIRKELPALKLILSLDG
                     AVGGALSFPDQLTRASSDFTPVDTSPDDPAMMVYTSGTTGQPKGALHGHRVLIGHLPG
                     VETHHDFLPQPGDRLWTPADWAWAGGLLNVLLPGLHYGVPVVARRFEKFDPEEAFALM
                     ARTQVRNAFIPPTALRMLRAAPNPKGRHAINMRSIGSGGESLGVETYEWGKSAFDLTI
                     N"
BASE COUNT          455 a          736 c          688 g          533 t
ORIGIN      
        1 cgaaatataa agtctattgg tcgctgatcc tggctgagcc tgacgaaaaa taaagaaaag
       61 cccgacgggc tcatgcgcgg cccacttggc ggcgtggttg ctgtcgcgat agttttgctg
      121 tctcgggggg gtgccatgcc aaaggcattt tcgcacacaa tcacgacagc agctgctgct
      181 gtttcaatct tgtctgcgtc atcggctggc gccgaaacgt tgtttcaccg tgctgaaaac
      241 caggtgccag tggcgatcgt tcagatcgat cgcacatcgg ctcacacgga aattcgcctg
      301 caggcgcagg ccgcactcac aaaagtatgt tttgctgcga tcggcccgaa cagtccgtat
      361 ttgctcgcca gcggtcgcaa ctatcgctac ctcgggggcg ataatgtcag cacctgtccc
      421 gagcggcgcg attatgccgc cggggatgtg cttgttctgc gtttcgaacc gcttgcggcg
      481 gggaacagca cattttcctt tgtatcgggc cagggcggcg aaaagcagtc gatcgacgcg
      541 gtcgcgccga acacgcctta ttggaatttt atccgggtga gattgaactg aatttcccga
      601 tgagcgctct cagcctttca ttcatcgcat tcctgtgcat tttcggcgcc acgttgcttg
      661 gggtctatct gcggcaggtc ttgccgacgc accacctgag cacggataca aaggagactg
      721 tcaggctcag catgggcgtc ataggcacaa tggctgcgct tgtgctcagt ctcctgattg
      781 catcggcaaa aagttcatat gatgcgaaga ccaaccagat caaacaattg accgtcaata
      841 tcatcgtcat agatcagctc ttcgctcagt atggccccga aacatatacc ctcagggatc
      901 tcctgcgccg gggagctgct gcgctcgccg acaaaatatg gagcgagcgg gacctggcca
      961 ccgctacaat gactgccttc gcaatgagtg ctgaagcaga ggccttcctc cgtcgagtcg
     1021 aagaactgaa gccgcaaacc gaaacccagc gcgctcttca ggctcgcgcg atcacggcga
     1081 tcacggacct ggcccagacg cgcctgctgc tctatgcgca ggcggagaat tcaattcccc
     1141 tgccgttcct cgtactgctg atatctggct cgccattatc tttggcagct tcagtttgtt
     1201 cgttgcgcca aaccctgttg tcatcgcggc atttttcgtt tgtgccgtct cggcatcggg
     1261 tgcgcttttt cttattttcg agctggtcac gccattctct ggactgatgc ccatttcgga
     1321 cgctccgcta cgccacgcgc ttgcacccct atgatgagca acaggtcggg ctggaccaca
     1381 tgctgaccgc tgactagcct tgcgccatgc cggttcttcc tcgcgtcaag gattacgaca
     1441 ccctctatcg tcaatttcgc tggcaggtgc cggcccgcta caacattggg gtcgacgtct
     1501 gcgatcgctg ggcggggaaa gatccggatc ggcttgcaat tatccacgcg cggccggacg
     1561 gccatgacga ccacatcact tatggttggc tgcgcgaaac atccaatcgg ctcgccaatg
     1621 ttctgcacac ccacggcgtt acccgccgcg atcgcgttgc gatcctgctc ccacaatcgt
     1681 ccgaagtggc cgccattcac gtggcgatct acaagcttgg cgccatagcc ctgccgctgg
     1741 cggttttgtt cggcgtcgac gcgctttctt accgattgca gaactcgggc gccgtcgccc
     1801 tgatcaccaa tgcgcgcggg gtcgagcgca ttgccgagat caggaaggaa ttgccggcgc
     1861 ttaagctgat tttgtcattg gatggcgccg tgggcggtgc actgagtttc cccgaccagc
     1921 tgacgcgcgc gtcgtctgat ttcacgccag tcgatacatc gcctgacgac ccggcgatga
     1981 tggtctatac gtccggtaca acgggtcagc ccaagggcgc gctgcatggc catcgcgtgc
     2041 tgatcggaca tctgcccggc gtcgaaaccc atcacgattt cctgccgcag ccgggcgacc
     2101 gtctgtggac gccagccgat tgggcctggg ccggcggtct gctcaatgtg ctgttgccgg
     2161 gcctgcacta tggcgtgccc gtggtggcgc gccgtttcga aaaattcgat ccggaagagg
     2221 ccttcgccct catggcgcgg acgcaggttc gcaacgcttt catcccgccg actgcgctgc
     2281 gcatgctgcg cgccgcgccc aatccaaaag gccgccacgc gattaacatg cgctcgatcg
     2341 ggtccggggg cgaatcgctg ggcgtcgaaa cttacgaatg gggaaaatcg gcgttcgatc
     2401 tgaccatcaa cg
//
LOCUS       DATDHO010000975         2855 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_445012, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000975 DATDHO010000000
VERSION     DATDHO010000975.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2855
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_445012"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..219
                     /locus_tag="VIY07_19115"
     CDS             <1..219
                     /locus_tag="VIY07_19115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEY6383905.1"
                     /translation="LFFLTSLTLSILAGTNRKPTSILQGGSPSAPTAPGTPTPLGGGG
                     GGLLDQLQGGSQPPAPSGPSGPQVPQSK"
     gene            425..2053
                     /locus_tag="VIY07_19120"
     CDS             425..2053
                     /locus_tag="VIY07_19120"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEY6383906.1"
                     /translation="MARYIFITGGVVSSLGKGLASAALGAVLQARGYKVRLRKLDPYL
                     NVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGRPATRHDNITTGRIYQDILTRE
                     RRGDYLGATIQVIPHVTNAIKDFIREGNEGFDFVLCEIGGTVGDIEGLPFFEAIRQLG
                     NDLPRRHAVYIHLTLMPFIPSAGELKTKPTQHSVKELRSIGIQPDILLCRTDRPIPES
                     ERRKLALFCNVRESAVIEARDVDNIYAVPEAYSAQGLDGEVLAAFGIEPRQVPDLDRW
                     RLINERIRNPEGDVTIAIVGKYTGMKDAYKSLIEALSHGGIANKVKVNLDWIESEVFE
                     NKDPTPFLEHVNGILVPGGFGQRGAEGKIKAVQFARERNVPYFGICFGMQMAVVEAAR
                     NLCGIENANSTEFGTTPEPVVGLMTEWLKGNELQKRNASGDLGGTMRLGAYDAVLTRG
                     SRVSEIYGTTEISERHRHRYEVNTAYKGRLEQRGMRFSGMSPDGILPEIIEYEDHPWF
                     IGVQFHPELKSRPFEPHPLFSSFIGAAVEQSRLV"
     gene            2064..>2855
                     /locus_tag="VIY07_19125"
     CDS             2064..>2855
                     /locus_tag="VIY07_19125"
                     /inference="COORDINATES: protein motif:HMM:NF024859.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6383907.1"
                     /translation="MPRGLDHIVHAVRDLDAAADVYRRLGFTVGARNRHPWGTHNHIV
                     QLTGFFIELLTLAEPDKIGDDGFSRLFAAYNRDFVQRHEGLSLLIVESQDADADASAF
                     RSARIADSDKLHFEREGKRPDGSTVKVGFSLAFADDAAAPEIHFASCQQHYPQNFWNP
                     AFQKHANSVTGIAGTVVVAERPDIHQDFFESFVGAKAIRLDGGFTVPTLRGEIDVLRP
                     AAFVHRFGVTPPDVANGARLAALRFAVADPGLLEGVPEQAGIAGLF"
BASE COUNT          567 a          865 c          867 g          556 t
ORIGIN      
        1 ctattctttc tgacaagcct gacgctgtcg atcctggccg gcaccaatcg caagccgacc
       61 tcgatcctgc agggcggcag cccaagtgcg ccaaccgctc ctggcacgcc cacgccgctc
      121 ggcggcggag gtggcggctt actcgatcag ctgcagggcg gatcgcagcc tcccgcgcca
      181 tccggccctt cggggccgca ggtgccgcag tcgaaatgaa attgacaagc gaagggccgg
      241 gaactccggc ccttcagcgt tatggagaag gtcgtagtgg ctggaagtga atcgaaatgg
      301 acatgaagac aaagcgccaa gggtctggaa aaccagaagt tcggctgcct gcgcacaggc
      361 gcagaacggg tctgcgcttt tcgggctcgt cgaatcgatt cgggcgcgct agagagtagg
      421 tcccatggcg cggtatattt tcatcaccgg cggcgtggtt tcctcactcg gcaagggtct
      481 cgcatccgca gcgctcggcg cggtgctgca ggcgcgcggc tacaaggtgc gcctgcgcaa
      541 gcttgaccct tatctcaacg tcgatccggg gacgatgtcg ccgtatcagc acggcgaggt
      601 tttcgtcacc gacgatggcg ccgaaaccga tctcgatctg ggtcactacg agcgatttac
      661 cggccgtccc gccacgcgcc acgacaacat caccaccggc cgcatttacc aggacattct
      721 cacgcgcgag cgccgaggcg attatctcgg cgcgacgatc caggtcatcc cgcacgtcac
      781 caacgccatc aaggatttca tcagggaagg caatgagggg tttgacttcg tgttgtgcga
      841 gatcggcggc acggtcggcg acatcgaagg attgccgttt ttcgaagcaa tccggcaact
      901 gggcaacgat ctgccgcggc gccacgccgt gtacatccat ctcaccctca tgccgttcat
      961 tccgagcgca ggcgaactca agacaaagcc gacccagcat tcggtgaagg agttgcgctc
     1021 gatcggcatc cagccggaca tcctgctctg ccgtaccgat cggccgattc ccgaaagcga
     1081 gcggcgcaag ctggcgcttt tttgcaacgt ccgcgaaagc gcggtgatcg aagcgcgcga
     1141 cgtcgataac atttatgccg tgccggaggc ctattcggcc cagggcctgg atggcgaggt
     1201 tcttgcagcg tttggaattg agccccgcca ggtccccgat ctagatcgct ggcgcctgat
     1261 caacgagcgc attcgcaacc cggaaggcga cgtcacgatt gccattgtcg gcaaatacac
     1321 cggcatgaaa gacgcctaca aatcattgat cgaagcgctc tcgcacggtg gcatcgccaa
     1381 caaggtgaag gtcaatctcg actggatcga gtccgaggtg tttgagaaca aggatccgac
     1441 gccgtttctc gaacacgtca atggcattct cgttccgggc ggatttggcc agcgtggtgc
     1501 ggagggcaaa atcaaggccg tgcagttcgc ccgcgagcgg aatgtgcctt atttcggaat
     1561 ttgtttcgga atgcagatgg ccgtggtgga agccgcgcgc aatctgtgcg gcatcgaaaa
     1621 cgccaattct accgagttcg gcaccacacc cgagcccgtg gttggtctca tgaccgagtg
     1681 gctcaagggc aacgagttgc agaagcgcaa cgccagcggc gatctgggcg ggaccatgcg
     1741 cctgggcgcc tatgacgcgg tgctcacccg gggcagtcgg gtctcggaaa tctatggcac
     1801 gaccgaaata tccgaacggc accgtcaccg atacgaggtc aataccgcct acaagggccg
     1861 gctcgagcag cgggggatgc gcttctcggg aatgtcgccc gacggcatcc tgcctgaaat
     1921 cattgagtac gaagatcatc catggtttat cggcgtccaa tttcaccccg agctgaaatc
     1981 gcggccattc gagccgcacc cgctgttctc gtccttcatc ggcgcagcag tcgagcaaag
     2041 ccgtctggtg taacgcggcg tccatgccac gcggactgga tcatattgtt cacgcggtgc
     2101 gcgatctcga cgccgcagcc gatgtctatc gccgcctggg ttttactgtc ggcgcgcgta
     2161 accggcaccc gtggggcacg cacaatcata ttgtccaact gacgggcttc ttcattgagc
     2221 tgttgacgct cgccgagccg gacaagatcg gcgacgatgg cttttccaga ttgttcgcgg
     2281 cttataatcg ggatttcgtg caacggcacg aaggcttgtc gctccttatc gtggagtcgc
     2341 aggacgccga tgccgacgcc agcgcgtttc gttcagctcg catcgcagac tcggacaagc
     2401 tgcactttga gcgcgaaggc aaacggccgg atggctcgac cgtgaaggtc ggtttctctc
     2461 ttgctttcgc agacgatgcg gcggcaccgg aaattcactt cgccagctgc cagcaacatt
     2521 atccgcagaa tttctggaat ccggcattcc agaagcacgc aaacagcgtc accggcatcg
     2581 cgggcaccgt cgtcgtagcc gagcgacccg acatacatca ggattttttt gagagctttg
     2641 tcggagccaa ggcgatcaga ctcgacggcg gcttcaccgt cccaacgcta cgcggcgaaa
     2701 tcgatgtgtt gaggcctgcc gctttcgttc atcggtttgg cgtgactccg cccgatgttg
     2761 caaatggcgc gcgtctggcg gcgttgcggt tcgcggttgc ggatccagga cttttggaag
     2821 gtgtccccga acaagccggg atcgccgggc tcttc
//
LOCUS       DATDHO010000976         3274 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_394836, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000976 DATDHO010000000
VERSION     DATDHO010000976.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3274)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3274)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3274
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_394836"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..439
                     /locus_tag="VIY07_19130"
     CDS             <1..439
                     /locus_tag="VIY07_19130"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="LysR family substrate-binding domain-containing
                     protein"
                     /protein_id="HEY6383908.1"
                     /translation="YPAELTGFVVDRHPYYVAIPEGHPLARRKQISLAMLAQESFVAG
                     SLELEVGFWGNLGAIAKPGQSLRIVQRTHDIFSLLTFVAAGVGLGIISAPMQNVVIPG
                     IVYRRISGALQEAEIALAYRKSESSPVVKSFIQQLRARARIHS"
     gene            504..1658
                     /locus_tag="VIY07_19135"
     CDS             504..1658
                     /locus_tag="VIY07_19135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HEY6383909.1"
                     /translation="MHDAGIRLPLLLQPVALRGIFARNRIVVSPMCQYHSMSGGPTDW
                     HLVNLGKYAIGGASIVFTEETAVEERGRKTYECAGIYSDDHVRAYRRITDFIRGQGAL
                     PAIQLGHAGRKASSDVPWKNFKPLDETDVARGLKPWTGISASALPDPRPGSSTPIAMS
                     TSDIRDMIEVWRDAAVRSVDAGFDICEIHGAHGYLIHQFLSSLANRRNDSYGGDLNGR
                     MRFALEVTEAVRAVWPQDRPLFFRCSATDGPEGRWTVDDTIVLSRELRDRGVDVITCS
                     SGGISGPINTAIVPRHPGYHVAYSDRVRREAGIKTVAVGLITEAHHAEQILRDGQADL
                     IALARELLYNPHWPVHAARELGIENYLDVLPFALSWWLKRREEVRRLKPN"
     gene            1693..2661
                     /locus_tag="VIY07_19140"
     CDS             1693..2661
                     /locus_tag="VIY07_19140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014440107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6383910.1"
                     /translation="MLLRVIFAALLVGFSQQAALAQYPSKPVRIVVPYPPGGAVDAFA
                     RVLSQQLSDVWSQQVVVENRPGASTMIGAEQVAKSPADGYTLLLTAELTFVTVPHLYE
                     KIPFDPVKDFAPIAALVSATQALVANPSLPAKTVKDIVVLAKAKPGELSYGSFGIGST
                     GHLNMEVLQAMTGVRFNHVPYTGAGPAMNDVIGGHINFMFAALSIVKGNVQAGKLRMI
                     GVGSDHRSREFPDVPTISESGASGFEAKSWFGLAAPAGTPADIIKKINKDVAKVLSDP
                     AFADRYLAAQGLESIVSSPEQFVTFIRDETVKWGKVVKNANIKITK"
     gene            2922..>3274
                     /locus_tag="VIY07_19145"
     CDS             2922..>3274
                     /locus_tag="VIY07_19145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383911.1"
                     /translation="MSKNIFPQSAGLQLSNSAQSQIASKPQRSEPITFELNGDGARLD
                     LAAVVQAAPFEALASVTEAQPTPSDADRILPSAAAFRDASIDPLQHGLVPLALLGQDG
                     KNGNLFASVNHSLTP"
BASE COUNT          651 a          942 c          974 g          707 t
ORIGIN      
        1 gtatcctgcc gagctcacgg ggtttgtcgt cgatcgccac ccttactatg tggcaatccc
       61 tgaaggccat cccctggctc gacgcaagca aatcagcctc gcaatgcttg ctcaggagtc
      121 gtttgtcgcc ggctcgctgg agctggaagt cggcttttgg ggcaacctgg gcgcgatcgc
      181 gaaacctgga cagtcgctcc gcatcgtgca acgaacccat gacatcttct ctctgctcac
      241 ctttgttgcg gccggagtcg ggctgggcat catttcagca ccgatgcaga acgtcgtcat
      301 tccgggcatc gtctatcgaa ggatctcagg cgcgctgcaa gaggccgaaa tcgccctggc
      361 gtatcgaaaa agcgagagtt cccccgtggt caagtcattc atccagcagt tgcgggcgag
      421 agcgcggata cattcgtagt tattggatcg gcgcacgaga ttgacccata gtgtggcgca
      481 cactctttcc ggagatgacg tcaatgcatg atgcgggcat ccggcttccg cttctgctcc
      541 agcctgttgc cctgcggggg atttttgccc gcaatcgcat cgtcgtttcg ccgatgtgcc
      601 aataccattc gatgagcggc ggcccgacag actggcatct cgtgaatctc gggaaatacg
      661 cgataggcgg tgcaagtatc gtattcaccg aagagacagc ggtggaggaa cgtggccgta
      721 aaacctatga atgcgccggg atctattcgg acgatcatgt tcgcgcctac cgcaggatca
      781 ccgatttcat tcgcggccag ggcgcgctcc cggcgatcca gctcggtcat gccggccgaa
      841 aggcatcgag cgatgtgccc tggaagaact tcaagccgtt ggacgagacc gacgtggcgc
      901 gtgggctgaa gccctggacg ggaatatcgg caagcgcgct ccccgatccg cggccaggct
      961 cgtcgacgcc gatcgcgatg tccacgagcg acatccgcga catgatcgag gtgtggcgtg
     1021 atgcggcggt tcgaagcgtc gatgcaggtt tcgatatttg cgaaattcat ggagcgcacg
     1081 gctatctgat ccaccagttc ctcagctcgc tcgcgaaccg ccgcaacgac agctatggcg
     1141 gagacttgaa cggccgcatg cgtttcgctc tcgaagttac cgaggcggta agggctgttt
     1201 ggccgcaaga ccggccgctg tttttccgct gctccgccac cgacggcccg gaaggtcgat
     1261 ggaccgtcga cgacaccatc gtattgtcgc gcgaattgcg cgatcgcggc gtggacgtca
     1321 tcacctgttc atcaggcgga atcagcggac cgatcaacac ggcgatcgtg ccgcgtcatc
     1381 cgggctatca cgttgcctat tcggatcgcg tgcgtcgcga agccggcatc aagaccgttg
     1441 ccgtcggatt gattaccgag gcgcatcatg cggagcagat actccgcgac ggtcaggcgg
     1501 atctgatcgc gcttgcgcga gagcttcttt acaatcccca ttggcctgtt catgctgcca
     1561 gggaattggg tatcgagaac tatctcgatg tccttccatt tgcactttcg tggtggctca
     1621 agcgccggga agaagtgcgc cggttgaaac cgaactgagc gcgccgtcgg cgtaacgacc
     1681 gtggggaacg ccatgctgtt gcgcgtgatc tttgcggcgc tgcttgttgg attttcgcag
     1741 caagccgcgc tggcgcagta tccatcgaag ccggttcgca ttgtcgtccc ttacccgccc
     1801 ggaggcgctg tcgatgcttt cgcgcgcgtg ctgtcacagc agctatcgga tgtttggagc
     1861 caacaggtcg ttgtggagaa tcggccgggt gccagcacca tgatcggcgc cgagcaggtc
     1921 gcgaaatcac ccgccgacgg ctacacgctt ctgctcacgg cagagctgac gtttgtgacc
     1981 gtccctcatc tttacgaaaa gatccccttc gatccggtga aggattttgc cccgatcgct
     2041 gccctggttt ctgcgacgca agccttggtt gccaacccgt cgctgccggc gaagacggtc
     2101 aaggatatcg ttgtgctcgc caaggcgaaa ccgggcgagc tgagttacgg atcgttcggg
     2161 atcggctcta cgggacatct gaatatggaa gtgctgcagg cgatgaccgg cgtgcgcttc
     2221 aatcatgttc cctatacggg ggccgggcct gcgatgaacg acgtcatcgg cggtcatatc
     2281 aacttcatgt ttgccgcttt gagcatcgtc aaaggcaacg tgcaggcggg aaaactccgt
     2341 atgatcggag tcggcagcga tcatcgcagc cgagaatttc ccgacgtgcc gacaatttcg
     2401 gagtcgggtg cctccggatt cgaagcaaaa tcctggtttg gacttgccgc acctgcgggg
     2461 acgccggcgg acattatcaa gaagataaat aaagacgtgg ccaaagtgct ctcggacccg
     2521 gccttcgcgg atagatatct tgccgcacag ggactggagt cgatcgttag ttcacctgaa
     2581 cagtttgtga catttattcg cgacgaaact gtgaaatggg gcaaggtcgt caagaacgcg
     2641 aatataaaga taacgaagta gcgtcgaatc ggtcgacacg cagatcagtt ttcggattgt
     2701 tcacgcgctt tggttaacgt gatcgactcg cggtggacac tcggctttgt ttctttcctg
     2761 taaatgaagt tggcaacaaa catttcgtga tgcgacataa atcgtctgtt tgggcgacgc
     2821 gcgcaccagc gagagtttgt taaagacatc ctgcctgagc gtcgtgaatg accggggctg
     2881 cctcacgacg ttccaacagt ttagtttttg aggcaggtgt catgagtaaa aatattttcc
     2941 cgcagtcggc cggtctgcag ctttccaatt ctgctcagtc gcaaatcgct tcaaagcctc
     3001 agcgcagcga gcccatcact ttcgaactca acggcgacgg cgcgaggctc gatctcgccg
     3061 cggttgtgca agctgcaccg ttcgaggcgc ttgcatcggt gaccgaggcc cagccgacgc
     3121 catccgacgc cgacagaatc cttccgagcg ctgccgcctt ccgcgatgct tcgatcgatc
     3181 cccttcaaca cgggttggtg ccgctggcgc tgctgggcca ggacggaaag aacgggaatc
     3241 tcttcgccag tgtcaatcat tccctgacgc ctca
//
LOCUS       DATDHO010000977         3988 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_47090, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000977 DATDHO010000000
VERSION     DATDHO010000977.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47090"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..685)
                     /locus_tag="VIY07_19150"
     CDS             complement(<1..685)
                     /locus_tag="VIY07_19150"
                     /inference="COORDINATES: protein motif:HMM:NF025010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEY6383912.1"
                     /translation="MNVRRLAYGRWLIGAFVGLALVTPGTALAQVVVIANGSPITEYD
                     IQQRSKLDEISHKNTSRQQVINDLIDDRLKIARAKVYGLEVSDAEVNNAFDGMATRQH
                     ITLAQFTQVLERAGISATTVKARIRAELTWQQLIRGKYASSLQVGESDVTKALKERNE
                     GDTPAVGYIYTLYPIVMVVARGSNEAAISAKRSEAESLRGRFLSCNEGLAMARGLRDV
                     AVRDPITRNS"
     gene            complement(736..3246)
                     /locus_tag="VIY07_19155"
     CDS             complement(736..3246)
                     /locus_tag="VIY07_19155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEY6383913.1"
                     /translation="MAGLVSTRPSASRPFRCGVAKLAAVISLLAVGGLIAPAPASAQQ
                     LQFPQRAPAPKKSQIALEREKSGQKQMLVQAKEIDYDYANSRVAAVGNVQIYYGNSTL
                     EANRVVYDQKTKRLHAEGNVRLTEQDGKVTYGEIMDLSDDYRDGFVDSLRLDAPDQTR
                     MAATRAERSSGRYTVFHNGVYTACLPCKDDPKKPPLWQVKAARIIHDQGEKMVYFEDA
                     RLEFFGQPIAFLPYFSAPDPTVKRKTGFLMPIFSSSSVYGAAVEIPYYWALAPDYDAT
                     FSPMITTRQGPLLQGEFRQRLINGAYSIRAAGIYQLDKDYFSSSKFTPAPGDPATTNP
                     GFRDWRGSLESSGLFALNNKWVWGWDATALSDKTFLQDYHPSLSKLRAVDTFQNPQSE
                     AISQLYLAGKGNRSYFDARTIYYYGFSQADTQGQIPVIHPVIDYNYVFDRPILGGEVG
                     YRINFTSLTRTDADFDPITQSALLNGTCTQTANPAIKNTASCLLRGIPGTYSRFSAEA
                     QWRRTITDPFGQVFTPFVSVRADAASLQTRNEPGVSNFTPETDDSLVRGMPTAGLEYR
                     YPFISVQSWGSQTLEPIAQVLLRPNETQIGKWQNEDAQSLVFDDSNLFRVDKFSGWDR
                     AEGGGRANYGVQYTAQFNQAGSFNALFGQSYSLFGENSFAVASPTNTGLNSGLDTTGS
                     DYVARLSYQPNSIYLFTSRFRLDHENFTPRRIELEARASFDRWSGSVLYGDYSAQPLI
                     GILDRQQGILGTGQVKLDANWVLLGGARYDINAGKFDQTRVGLGYVDDCLILGLNYLT
                     NYTYSGNVQANHTVMLQLSLRTLGGTSVSQGVGHTTQY"
     gene            complement(3246..>3988)
                     /locus_tag="VIY07_19160"
     CDS             complement(3246..>3988)
                     /locus_tag="VIY07_19160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="LptF/LptG family permease"
                     /protein_id="HEY6383914.1"
                     /translation="TTIYNPVSALLQERSKRFEAELFGLRGNSLGRGGGPFWTSQRTD
                     EGQAIINATSSRDQGINLNGVSVYTFDTEGRFKQRIEARAALLQPGAWLLRDARVYAL
                     GVLPARQTEYYLKTSLTPEQVRESFATPETVPFWELPEYIQIAEHAGLIASGYRLQFQ
                     KLLARPFLLSAMVLLAAAVSLRFFRFGGIQKMVLSGVAAGFLLYVLSKVTEDLSKAEL
                     MHPVAAAWLPVLAGGLTGFIALLYQEDG"
BASE COUNT          825 a         1129 c         1175 g          859 t
ORIGIN      
        1 ccgaatttct ggtgattgga tcgcgcactg cgacatcgcg caatccgcgc gccatggcca
       61 ggccttcatt gcaggagagg aaccggccgc gcaggctttc tgcctcgctt cgcttcgctg
      121 aaatcgcggc ctcgttcgac ccgcgcgcga caaccatcac gatcgggtac agcgtgtaga
      181 tatagcctac cgcgggagtg tcgccttcat tgcgttcctt cagcgccttg gtgacgtcgc
      241 tctcgccgac ctgaagagag gaggcgtact tgccgcggat cagctgctgc caggtcagct
      301 ccgcacggat tcgtgccttg accgtggtgg cagaaatgcc ggctcgctcc agcacctggg
      361 tgaattgcgc caacgtaata tgttgcctgg tcgccattcc atcgaaagcg ttattgacct
      421 cggcatcact gacctccagt ccataaacct tggcgcgcgc gatcttgagc cgatcatcga
      481 taaggtcatt gatgacttgc tggcggctcg tgttcttatg cgagatctca tcgagcttgc
      541 tgcgctgctg gatgtcgtat tcggtgatgg gagaaccgtt cgcgatgacc accacttgtg
      601 ccagcgcagt ccctggggtg acgagagcca gaccgacaaa ggcgccgatg agccatcggc
      661 catatgccaa gcgtctgacg ttcattggct gcattttgga tttcagtatg ttcatagcct
      721 atgccgtgta cggtcttaat attgcgtggt gtggccaacg ccctggctca cagacgtgcc
      781 gcccagcgtt cgcaaactca gctgcagcat gactgtatgg ttcgcctgca catttccgct
      841 atacgtataa ttcgtcagat agttcagacc caatatcagg caatcgtcga catagccgag
      901 acccacgcga gtctggtcga actttccggc attgatgtca tagcgggcgc caccgagcag
      961 gacccaattt gcatcgagct tgacctgccc ggttcctaga atgccctgtt gacgatcgag
     1021 aatgccgatc agaggctgcg cggagtaatc accgtagaga acgctgccac tccatcggtc
     1081 gaaactcgcc cgcgcctcga gctcaatccg ccgtggagtg aagttttcgt ggtccaaacg
     1141 gaaccgcgaa gtgaagaggt agatgctgtt tggctgatat gacaaccgcg ctacatagtc
     1201 ggagccggtg gtgtccaggc cgctgttaag tccggtattg gtcgggctcg cgacggcaaa
     1261 ggaattctcg ccaaacagac tgtaggattg gccgaacaaa gcgttgaagg aaccggcctg
     1321 gttgaactgg gcagtgtatt gaacaccata atttgcgcgc ccgccgcctt cggcgcgatc
     1381 ccagcccgag aacttgtcga ccctgaacaa gttgctgtcg tcaaagacca ggctctgcgc
     1441 atcctcgttc tgccattttc caatctgcgt ctcgttgggc cgcaggagca cttgcgcaat
     1501 cggctccaag gtttgcgagc cccaggactg cacgctgatg aaaggatagc gatactccag
     1561 gccggccgtc ggcatgccgc gcacgagact gtcgtctgtt tcgggcgtga agtttgatac
     1621 tcccggctcg ttcctggtct gcaacgaagc tgcgtctgcg cgcaccgaaa cgaagggggt
     1681 gaaaacctgt ccgaacggat cggtaattgt tcgccgccat tgagcttcgg ccgaaaagcg
     1741 actgtatgtg ccgggaatgc ctcgcaacag gcagctggcc gtgttcttga tcgcaggatt
     1801 ggcggtctgc gtgcaggttc catttagcag cgcgctctgg gtgatcggat cgaagtcggc
     1861 gtcggtgcgg gtcagactgg tgaagttgat gcggtagccg acttcgccgc ccaaaatcgg
     1921 acggtcaaaa acgtagttgt agtcgatcac cggatggatg acaggaatct gaccttgcgt
     1981 gtccgcttgc gaaaaaccgt aatagtaaat tgttctggca tcgaaatagc tgcggttgcc
     2041 tttgcccgcg aggtagagct gcgagatcgc ctcgctttgc gggttctgga acgtatcgac
     2101 ggcgcgaagt ttggacagac tcgggtggta atcctgcaga aatgtcttgt cggacagtgc
     2161 cgtcgcatcc caaccccaca cccatttgtt gttgagggcg aacaggcccg aactttccag
     2221 gctgccgcgc caatcgcgga agcctggatt tgtcgtcgcg gggtcaccgg gagccggtgt
     2281 aaatttcgac gaggaaaagt aatccttgtc gagctggtat atgccggccg ctctgatcga
     2341 ataggcgcca ttgatcaagc gttgacggaa ttcgccctgc agcagcggtc cctgcctcgt
     2401 ggtgatcatc ggcgagaatg tcgcatcgta gtcgggcgca agagcccagt agtagggaat
     2461 ttcaacggca gcgccataca ccgagcttga tgaaaatatc ggcatcagga agccggtctt
     2521 gcgcttgacg gtcggatcgg gtgcggagaa gtacggcaga aacgcaattg gctgaccaaa
     2581 gaattcgagc cgggcgtctt cgaagtaaac catcttctcg ccctggtcat ggatgatgcg
     2641 cgcggccttc acctgccaga gcggcggctt tttcggatcg tctttgcagg gtaggcaggc
     2701 ggtatagacc ccattgtgaa agaccgtgta ccggccgctg gaacgttccg cgcgggtcgc
     2761 cgccatacgg gtttgatcgg gagcgtcaag acgcagcgag tcgacgaagc cgtccctgta
     2821 atcgtccgac aagtccatga tctcgccata ggtgaccttg ccgtcctgct ccgtgagccg
     2881 gacgttgcct tcggcgtgca gacgcttggt cttctgatcg tagacgacgc gattggcctc
     2941 gagcgtcgag tttccgtaat aaatttggac attgccaacg gcggcgacgc gactgttggc
     3001 gtagtcgtaa tcaatctcct tcgcttgaac gagcatctgc ttttggccgg acttctcgcg
     3061 ctcgagcgca atttgggatt tcttcggcgc cggcgcgcgt tgcgggaact gcaactgttg
     3121 agcggatgcg ggggcaggcg caatcaatcc gccaacagcc agcaggctga tgacggcagc
     3181 aagtttcgcg acgccacagc gaaacggccg tgacgctgat gggcgagtgc tgaccagccc
     3241 cgccatcacc cgtcctcctg gtacagcaac gcaataaatc ccgtcagccc gcccgcgagc
     3301 acaggcagcc aagccgctgc cacagggtgc atcagctcag ccttgctcaa atcttcagtt
     3361 actttcgata aaacgtaaag cagaaagccg gccgccacgc cactcaaaac catcttctgg
     3421 atcccgccaa agcgaaaaaa ccgtagactg accgcggcag caaggagaac catagcagac
     3481 agcaagaacg gccgggccaa gagcttctga aattgcaatc tatagcctga ggcaattaag
     3541 ccagcgtgct ccgctatttg gatatactcg ggaagttccc agaaaggcac ggtttctggt
     3601 gtagcgaaac tttcgcgcac ttgttcgggt gtcaggctcg tcttgaggta atattccgtt
     3661 tgccgggctg gcagtacgcc caatgcgtat acgcgtgcgt ctcgaagcag ccacgcgcca
     3721 ggctgcagaa gcgccgcgcg cgcctcgatt cgctgtttga aacgaccttc ggtatcgaac
     3781 gtgtagacag acaccccatt gagattgatg ccctggtcgc ggcttgaggt agcattaatg
     3841 attgcctggc cttcatcggt acgctggctg gtccagaacg ggcctccgcc ccggccaagt
     3901 gaatttcccc ttagcccgaa cagctcggct tcaaatcgct tcgagcgctc ctgaagtaat
     3961 gcggagaccg gattgtagat ggttgtgg
//
LOCUS       DATDHO010000978         2565 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_245431, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000978 DATDHO010000000
VERSION     DATDHO010000978.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245431"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            202..1185
                     /locus_tag="VIY07_19165"
     CDS             202..1185
                     /locus_tag="VIY07_19165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383915.1"
                     /translation="MQRREFITLLGGAAAAWPVAARAQQPAMPVVGFLNAASAQVYTR
                     QLAAFLKGLSETGYVDGRNVTIEYRWAEGQHDRLPAMAADLVHRQVAVIAATTTPAAL
                     AAKAATTSIPIVFELGTDPVRLGLVASFSRPGGNVTGATQANLEAAPKQLELLHGLVP
                     TASVMALLVNPANAPVTETTVREVPAAARAFGLELHVLNASSEDDFDAVFAKLIQLRA
                     GGLVIGGGPLFASRSERLAALTVRHAVPAIAPYREFAVAGGLLSYGTDVGEAYRLTGV
                     YVGRVLKGEKPADLPVQQATKVELYINLKTAKALGLTVPEGLLNAADKVIE"
     gene            complement(1338..1928)
                     /locus_tag="VIY07_19170"
     CDS             complement(1338..1928)
                     /locus_tag="VIY07_19170"
                     /inference="COORDINATES: protein motif:HMM:NF020893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VTT domain-containing protein"
                     /protein_id="HEY6383916.1"
                     /translation="MLFPTDLASFLELIRQHGDAAYSLMFAYAGSHSLLLALFAGYAA
                     HSGALQLGTLILVCWFGSFAGDAVRFWIGRRFGARWLGSFPRLERAVQTAARLADRHY
                     VLMILFHRYPHGIRGVAGFAYGMSLLPWSTFLALNFVAAGLWSCAVVLAGYAFGQVSE
                     KLMSDASSGIGLVMLVMFLGLSWMLSRKFEQAIERS"
     gene            complement(2017..2238)
                     /locus_tag="VIY07_19175"
     CDS             complement(2017..2238)
                     /locus_tag="VIY07_19175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383917.1"
                     /translation="MDLLLRVEAYQKVFLDAARHQVSELIPLNCATAVERPVVAHHSQ
                     LLVRFGSLADIATNPREVGFRPNNLEQIC"
     gene            2337..>2565
                     /locus_tag="VIY07_19180"
     CDS             2337..>2565
                     /locus_tag="VIY07_19180"
                     /inference="COORDINATES: protein motif:HMM:NF021465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2182 domain-containing protein"
                     /protein_id="HEY6383918.1"
                     /translation="MTASVTLGPRVPLFLVIWVVMMVAMMFPTAAPMILTFHRVQAAN
                     RKLGDAFVTTWVFVAAYLLVWACAGMAAYAGM"
BASE COUNT          535 a          749 c          791 g          490 t
ORIGIN      
        1 cgtcatcccc ttaaacctat tggtcgcagc cgacgaggtg atcgaataaa cgacgctatg
       61 tccgctattg gccctaagca gacatgccta gatacgttga cccaaagcgg acattggcct
      121 gattttttgt cgcactcgcc gcccggttgc aaagtgctag gctttagcaa ttgcacaagg
      181 catggtcctt acgggggaca catgcagcgg cgcgagttca tcacacttct cggcggtgct
      241 gcggctgcat ggccggttgc ggcgcgtgcg cagcagccgg cgatgccggt ggtcgggttt
      301 ctcaacgccg cttctgccca agtttacacg cggcaattgg cggcttttct caaagggctg
      361 agcgaaactg gttacgtcga tggtcgtaac gtgacaatcg agtaccgctg ggcggagggc
      421 caacatgacc ggctgccggc gatggcggct gatctggtgc atcgtcaggt ggccgtgatt
      481 gctgcgacga caactccggc agcgcttgcg gcaaaggcgg cgaccacgag cattccgatc
      541 gtctttgaac tgggcaccga cccggttcgg cttggccttg tcgcgagctt cagccggccg
      601 ggcggcaacg tcacgggcgc gacccaagcg aatttggagg cagcaccgaa gcaactggaa
      661 ttgctgcacg ggctggttcc gacggcgagc gtcatggccc tgcttgtcaa cccagccaat
      721 gctcctgtta cggaaaccac ggtgcgtgaa gtgccggcgg ccgctcgcgc cttcgggctg
      781 gagctccatg ttctaaatgc cagcagcgaa gatgacttcg atgcagtttt tgccaagctg
      841 atccaattgc gggcaggcgg gctcgtgatt ggcggcggtc cattatttgc gagccgaagc
      901 gaacggctcg ccgcgctgac ggttcgtcac gccgtgccgg cgattgcccc gtatcgcgag
      961 ttcgctgtgg ccggaggtct cctgagctac ggaacggacg ttggagaggc ataccgccta
     1021 accggcgttt atgtcggccg ggttctcaag ggcgaaaagc ccgccgactt gccggtgcag
     1081 caggccacta aagtcgagct gtacatcaat ctcaagaccg ctaaggcact cggtctgacg
     1141 gttccggaag ggctcctgaa tgccgccgat aaggtgatcg aatgaatggg cggaatgtcc
     1201 gcttttggcc cttagcagac atccctagtt gcaccgcaca tgtccgcatt caggggtaag
     1261 gcggacatcc tttaggaatg ccgccatgtc cgccaatgaa gcggaagatg ctttttcaat
     1321 cagctcaccc gcgcgcatca actccgctcg atggcctgct cgaacttcct gctcaacatc
     1381 caagagaggc cgagaaacat gaccagcatc accaagccaa tgcccgaaga ggcgtcgctc
     1441 atgagcttct ccgagacctg gccgaaggcg tagccggcca agacaacagc gcaggaccat
     1501 agacccgctg caacaaaatt gagcgccagg aaggtagacc agggcagcag cgacattccg
     1561 taggcaaagc ccgcgacgcc gcgaatgccg tgcgggtaac gatggaacag gatcatcaag
     1621 acgtaatgac ggtccgccag tcgggctgcg gtctggacgg cgcgttcaag ccgtggaaag
     1681 gagccgagcc aacgggcgcc aaaacgccgt ccaatccaga agcggaccgc atcgccggcg
     1741 aaactgccaa accagcagac caagatcagc gtgcctaatt gcagcgcgcc cgaatgcgcg
     1801 gcatagcccg cgaatagcgc aagcagcagg ctgtgcgagc ccgcataggc gaacatgagg
     1861 ctgtacgctg catcgccgtg ttggcgtatg agttcgagga acgatgcgag gtccgtcgga
     1921 aacagcactg gggcccactc aacagttcta tcgtgatcgt tgctctacga ccgggggtcg
     1981 cgaacgatcc caccgaccac gcacaaagcg gacgtgtcaa catatctgct caaggttatt
     2041 ggggcgaaag ccgacctcgc gcggatttgt cgcgatgtcg gctaatgacc caaagcggac
     2101 aagtaattgg gaatgatgcg caacaaccgg acgttcaaca gcggttgcac aatttaacgg
     2161 aattagctcg gaaacttgat gccgcgctgc gtcgagaaaa accttctggt aggcttcgac
     2221 gcgcagcaag agatccattc cggcttcaac gcaacgtcgt actgagtttg ctcttagcgc
     2281 tcgcggcagc ggcttgggca gtccttgtct ggcaccacgc cgacgccact gtggatatga
     2341 cggcctcggt taccctgggc ccgcgtgtgc cgctgttcct tgtgatctgg gtggtcatga
     2401 tggtggcaat gatgtttccg accgccgcgc ccatgatcct cactttccat cgagtgcaag
     2461 cagccaaccg caagcttggt gacgcgttcg ttacgacctg ggtgttcgtg gcggcgtatt
     2521 tattggtgtg ggcctgcgcg gggatggccg cttacgccgg gatgc
//
LOCUS       DATDHO010000979         3422 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_490010, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000979 DATDHO010000000
VERSION     DATDHO010000979.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3422
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490010"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..1089)
                     /locus_tag="VIY07_19185"
     CDS             complement(10..1089)
                     /locus_tag="VIY07_19185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HEY6383919.1"
                     /translation="MSLHSGAPPVDVRIDPRRYHESVQSERTEVAARSPVCVYLEVTN
                     RCNLLCTTCPRTYEELEPPADMSWELFKSIVDQVPDLVRAVLHGVGEPMLVPNLPRMV
                     RYLKDRGIYVLFNTNGTVLSERNGRALIAAELDELRVSLDASNRETFKAIRGKDYFGR
                     IVRNVRAFRELQKREGHTRPQVSIWLTGLKETVKELPAFVKLAADIGVQEVYLQRLVF
                     FDQSAVGKARPDQALFERLTREDAAYLSQAEDLARSLGITFSASGAASEPGLSLKRTD
                     AGSPWSLCRRPWSLMYFTANGRALPCCIAPFSQHGYDNYTLGDATQQTLREIWNGSAY
                     REFRSALLSDKPPVACANCGLRWSL"
     gene            complement(1086..2435)
                     /locus_tag="VIY07_19190"
     CDS             complement(1086..2435)
                     /locus_tag="VIY07_19190"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016758 - hexosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase 87 family protein"
                     /protein_id="HEY6383920.1"
                     /translation="MGQFAQPGLSAKNEPPLYPLAGIGAILAGLTLATPFAFQASGDN
                     AFIALTIPACVLAFAATQLAERTPTNRALWLIFGIGIALRIYVLLFDPLLSSDIFRYV
                     WDGRVQAAGINPYRYFPAHDAVAHLRDATIFPEINRPDYAVTIYPPVAEFFFLIVTRI
                     GENVTVMRLALLGCEAVSVTLIMLFLRRMERSTTRVVAYFWHPLPIWEIANSGHVDAL
                     AVALMLLGLWVALTGRAMRGAVLIALGMLVKPFVALALAPLWRPWDWKMPLIVIAIIA
                     LCYLPYLSVGWGVFGFLTKGYLTEEGIVSGNDLWLLSVWRLAFGAHRGDLVAYSAVAA
                     LILLFMALSAGRRPNRTIASSLADTNMLLLVVLLLLSPNYPWYFLAIVPFVALCGNAP
                     TWVLSIGALLLTDEVRWDFQIPKLVVKSILFGGCLLAYAWSAQVAYLKQTADTGRTQ"
     gene            complement(2455..3171)
                     /locus_tag="VIY07_19195"
     CDS             complement(2455..3171)
                     /locus_tag="VIY07_19195"
                     /inference="COORDINATES: protein motif:HMM:TIGR04282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR04282 family arsenosugar biosynthesis
                     glycosyltransferase"
                     /protein_id="HEY6383921.1"
                     /translation="MALAVTVAAIGIMCKAPQPGSAKTRLAKAIGAVAASELSACFLR
                     DVAAAIEAVPEVLGRQGYGVYAPAGAERVLRELFPQKFELLLQAGDDLGEALFGATRD
                     LLLGGHDCVLLVNGDSPTLPSHFLVQAIETLRNPGDRMVLGPASDGGYYLIGLKHPHR
                     RLFSKIEWGTDTVARRTRERAAEIGLATTLLPEWYDVDDFETLGWLRDELAGNSTRFR
                     EGSPASATRAFLATAWPATP"
BASE COUNT          801 a          992 c          980 g          649 t
ORIGIN      
        1 caacgtcact cacaggctcc agcgcagtcc acaattggcg caggccacgg gtggcttgtc
       61 ggaaagcaga gcgctccgaa attctcgata cgcggatccg ttccagattt cccgcaaggt
      121 ctgctgagtt gcgtccccca acgtgtagtt gtcgtagcca tgctgcgaaa agggcgcaat
      181 gcagcacggc aacgcgcggc cattggctgt aaaatacatc agtgaccaag gccgccggca
      241 gagcgaccaa ggcgaaccgg cgtctgttct ttttaaactc aagccaggct cagacgctgc
      301 gccggacgcg ctgaaggtga tgccaagcga gcgcgcaaga tcctctgctt gactgagata
      361 ggccgcatct tcgcgcgtca ggcgctcgaa cagagcttga tctggacgtg ctttgccaac
      421 ggctgattga tcgaagaaca cgagtctttg cagatagact tcctggacgc cgatgtccgc
      481 cgcaagcttc acaaatgccg gcagctcttt gacggtctcc ttcaagccgg ttagccaaat
      541 ggagacctgc ggcctagtgt gaccctctcg cttttgcagt tcgcgaaacg cacgcacgtt
      601 acgtacaatg cggccgaaat agtctttacc ccgaatggct ttgaaggtct cgcgattcga
      661 cgcatcgagc gatacgcgaa gctcatcgag ctcggccgcg atcagcgcgc gtccattgcg
      721 ttcactgagg acagtcccgt tggtgttgaa cagaacgtag attccgcggt ccttcaagta
      781 tctcaccatg cgcggcaggt tcgggaccaa catcggctcg ccgacgccat gcagcaccgc
      841 tcgcacaaga tcgggcactt gatcgacaat cgatttgaac aattcccaac tcatgtctgc
      901 cggaggctca agttcctcgt aggtacgagg gcacgtggtg cacagcaaat tgcaacgatt
      961 ggtcacttcc agataaacgc ataccgggga acgggcggcg acctcagtgc gctcgctttg
     1021 taccgattcg tggtagcggc gcggatcgat gcgcacgtca acaggcggag cgccactgtg
     1081 aaggctcatt gcgttcgtcc tgtatctgcg gtctgcttca gatatgccac ctgggccgac
     1141 caggcgtacg ccaagagaca tcctccaaat agaatagact tgacgaccag ctttggaatt
     1201 tggaaatccc aacggacttc gtcagtcagc aagagggctc caattgaaag cacccaggtt
     1261 ggtgcattgc cgcaaagtgc gacaaacggc acgatggcca gaaaatacca gggatagttg
     1321 ggcgaaagca gcagcaggac gaccagcaac agcatattcg tgtccgcaag gctggatgcg
     1381 attgtccggt tcggacgacg gccggccgaa agcgccatga acagcaagat caaggctgcc
     1441 accgcagaat aagcgacaag atcgccgcga tgtgcgccaa aagcgaggcg ccagacggaa
     1501 agtagccaga gatcgttgcc cgaaacaatg ccttcttccg tcagataccc tttggtcaag
     1561 aaaccgaaga ctccccagcc gacggaaaga tagggaagat aacaaagtgc aattattgcg
     1621 atcacaatga ggggcatttt ccagtcccat ggccgccaga gtggagcgag cgccaaggcc
     1681 acaaatggct tcacgagcat cccgagtgcg atcaagaccg cgccgcgcat cgcacgaccc
     1741 gtcagtgcga cccacagtcc gagcaacatg agtgccaccg ccagggcatc aacatggccg
     1801 ctattggcaa tctcccaaat cggaagaggg tgccagaaat atgcaaccac ccgagtcgtt
     1861 gaccgttcca tgcgacgcag gaacagcatg atcaaagtga cgctcacggc ctcgcaaccg
     1921 agcaaagcca gacgcatgac ggtcacgttt tcgccgatgc gcgtgacgat cagaaagaag
     1981 aattcggcga ccggcggata gatcgtcacg gcatagtctg gccgattgat ctcgggaaag
     2041 atcgtcgcgt cgcgcagatg cgccacggca tcgtgcgcgg gaaaatagcg gtatggattg
     2101 atgccggcag cttgaaccct gccatcccag acgtagcgaa agatgtcgct ggacaagagc
     2161 gggtcaaaca gcagcacata gatccgcagc gctataccga tgccaaaaat cagccaaagc
     2221 gcgcggtttg tcggtgtgcg ctcagctagc tgcgtcgctg caaacgccaa tacgcacgca
     2281 ggaatggtca gagcaataaa ggcgttatcg ccgctggcct ggaaggcaaa gggtgtcgcc
     2341 agggtcagac ccgcgaggat cgcaccgata ccggccaatg gataaagcgg cggctcattt
     2401 ttcgcggata gtcccggttg agcgaattga cccataaaga atctcgaaaa tggatcatgg
     2461 ggtcgctggc cacgcggtcg caagaaacgc tcgagtagct gaagcgggac tgccttcccg
     2521 aaatcgagtc gaattgccgg ctagttcatc gcgcagccaa cccagtgttt caaaatcatc
     2581 gacgtcatac cattccggga gcagtgtagt cgctagtcca atttctgctg cgcgctcgcg
     2641 ggtgcggcga gccacagtgt cggttcccca ttcaattttt gaaaacaggc gcctgtgtgg
     2701 gtgttttaac ccgatgaggt agtaaccgcc atcactcgct ggcccaagta ccatccgatc
     2761 gcctgggttg cgtagcgttt caatcgcttg caccaggaaa tgcgaaggta gtgttggact
     2821 atcgccgttg accaacagca cacagtcgtg tcctccaagt aatagatcgc gtgtggcgcc
     2881 aaacagtgct tctccaaggt cgtcgccggc ttgcagcaat agttcaaatt tttgcggaaa
     2941 cagctcgcgc aacactcgtt cggcccctgc cggggcatag acgccgtagc cttgcctgcc
     3001 cagtacttcg gggaccgcct cgatcgcggc ggcaacgtca cgcaaaaagc aggcggacag
     3061 ttcggaggcg gcaaccgctc ctatggcctt tgcaagtcgt gttttggcgc tgcccggctg
     3121 gggcgccttg cacatgattc cgatcgcggc aacggtcacg gccagtgcca tgaacgaatg
     3181 ctggtgccgg taattcgcct ctgcctggcc gcctcacgca gcagactttc cggcgtaaat
     3241 gccgacggca tgtcgtagtg tttttgcgcc agaatcggcg ggacttcgcc gtagtgagga
     3301 gccgacatca gcgcccaacc tgttgaaccc tgtaatgccc ccgtattcgt agcggttctc
     3361 accgatgctc gacaagctcc ggctagcggt ctcccgaaga caggaggcgt tatccgcctt
     3421 cg
//
LOCUS       DATDHO010000980         1670 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_47554, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000980 DATDHO010000000
VERSION     DATDHO010000980.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1670)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1670)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1670
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47554"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            213..>1670
                     /locus_tag="VIY07_19200"
     CDS             213..>1670
                     /locus_tag="VIY07_19200"
                     /inference="COORDINATES: protein motif:HMM:NF024724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEY6383922.1"
                     /translation="MNSERVTLQRQAGPLDAVQEVVRGVDPSSLETARKLVAGKFSDD
                     ERARESIDRGTEAAEILGKLGMDADTRAAALLLRLLGEGALDRAAIEKSIGAQVARLT
                     QGALRIASLKDLRKTATETLQANRLRQMLLTIAEDPRVVLVSLAHQLCALRRAENAPK
                     ETRRDLAQETLEVFAPLANRLGVWQLKQELEDLAFRYLEPDAYRRVSDGLDQRHADRG
                     RYIAQVVARLREELHRAGIRAEISGRPKHVFSVWTKMSEKDLDLSGVFDVLGFRILVN
                     DVSECYAALGVVHGLWEPLLDAFDDYIAKPKPNGYQSLHSAVIGPDGVTIEVQIRTFA
                     MNRHADLGVAAHWQYKEGLQRRIAWSRSFLESGESTPHDIDIIERFKQAAFHDRTYVL
                     TPQGHIIDLPADATPLDFAYAVHTEVGHRCRGAKVDGAMVPLTKSLVSGQQIEILTAR
                     DGHPSRDWLNPNLGYLKTSSARAKVRRWLKQQDHEA"
BASE COUNT          341 a          497 c          524 g          308 t
ORIGIN      
        1 gtttctgtcg gtgagcgtga agccttgcgg gcggacaaat caaggacttg ccttgtccga
       61 cccgcagccc gcttactctc agaaattcac aaccaacggt agaggtttgc ggttagcgaa
      121 ccgactgcta atgtataatc gtaagtttcg atcgcgtcgg tgaagcaagc gaagaggctt
      181 attggtgatg tcatttcgat gggttgttag agatgaattc cgagcgcgtt acattgcaga
      241 gacaggccgg acccctcgat gcggtccagg aagttgtccg cggcgtcgat ccgagtagct
      301 tggaaactgc gcggaagctg gtcgccggca agttttccga cgatgaacgc gcccgcgagt
      361 ctatcgaccg cggcacggaa gccgcggaga tcctcggcaa actcgggatg gatgccgaca
      421 cccgtgcggc tgccctgctg cttcggttac taggcgaggg tgcgctcgat cgggcagcga
      481 ttgagaaatc catcggcgct caagttgccc gcctgactca aggggcgctt cgtatcgcca
      541 gtcttaaaga cctccgcaaa accgcaaccg agactttgca ggcgaatcgt ctgcggcaga
      601 tgctactgac gatcgcggag gacccgcgag ttgtgctggt gagcctggca caccagctat
      661 gcgctcttcg cagagccgag aatgccccga aagagacacg acgcgacctc gctcaagaaa
      721 ccctggaagt gttcgcgcca ctggcgaacc ggctgggcgt ctggcagctc aaacaggagc
      781 tcgaagatct cgcttttcga tatctggagc cggacgccta tcgacgcgtc tctgacgggc
      841 tcgaccagcg gcacgcggac cgcgggcgtt acatcgcgca ggttgtcgcg cggctgcgcg
      901 aagaactgca tcgcgccggt atccgcgccg agatcagcgg ccgccccaag cacgttttca
      961 gcgtctggac caagatgagc gagaaggacc tcgacctcag cggagtattc gacgtgctcg
     1021 gctttcgcat cctggtgaat gacgtcagcg agtgttacgc ggcgctgggc gtggtgcacg
     1081 ggctgtggga gccgctcctg gatgcgtttg acgactacat tgccaagccc aagcccaatg
     1141 gctaccagtc gctgcactcg gcagtgatag gtccggacgg agtaacgatc gaggtgcaaa
     1201 tccgcacgtt cgccatgaac cgccacgccg atctgggggt ggcggcccac tggcaataca
     1261 aggaaggtct gcagcggcgc atcgcgtggt cacgcagctt cctggagagc ggggagagca
     1321 cgccgcatga catagacatc atcgagcgct tcaaacaagc ggctttccac gatcggacct
     1381 acgtgctcac gccgcagggt catatcatcg atcttccggc tgacgccacg ccgctcgact
     1441 ttgcctatgc ggttcacact gaggtgggtc accgctgccg cggcgccaag gtcgatgggg
     1501 cgatggtccc gcttacgaag tccctcgtga gcggccagca gatcgagatc ctgacggcgc
     1561 gggacggcca ccccagccgc gattggctga atcccaacct tggatatctg aaaacctcct
     1621 ctgcgcgagc gaaggtccgc cgctggctca aacagcagga tcatgaagcg
//
LOCUS       DATDHO010000981         1535 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_490104, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000981 DATDHO010000000
VERSION     DATDHO010000981.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1535)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1535)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1535
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490104"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1004
                     /locus_tag="VIY07_19205"
     CDS             <1..1004
                     /locus_tag="VIY07_19205"
                     /inference="COORDINATES: protein motif:HMM:NF012766.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HEY6383923.1"
                     /translation="LTQWPVTAEAVGIFTPHERDALFVQYVNHAPQARILADKADVAW
                     GGESSIVAAITVLEQRGARQDRIATIGPVSAEQHSALSAKFGKLKGLNRNYVRLRQVK
                     SAEELDWLRIGAHFSDLGMAALRDGLKPGLNERELGDLVERVYVPHGATNVIHYIGVT
                     SMKMPELGVPRQFPRMRRVQTGDVAVAEISAAFWEHPGQILRSFALGEPSKLYKELHA
                     AADAAFDAIAGVVKAGATPAQAIEASAVIEEAGFTIIDDLLHGYGGGYLPPILGCNSR
                     PAGPIPQEPFRAGQTVVIQPNIVTPDGKAGVQTGEMVLITDNGIERLHGMPRGFLVL"
     gene            complement(1030..>1535)
                     /locus_tag="VIY07_19210"
     CDS             complement(1030..>1535)
                     /locus_tag="VIY07_19210"
                     /inference="COORDINATES: protein motif:HMM:NF012546.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HEY6383924.1"
                     /translation="KAVIDFVQKRSDLDTDRIGMWGVSLGGYYAPRATAFDKRIKACI
                     ALGGPFNWGAAWDGLPELTREAFRVRSHCRTQEDARKNAETLSLEGLAQAITCPLFIV
                     NGRLDRIVPARDAERLAREAKGPVTLMMIEDGNHIATNRAYRWRSQSADWMKEQLGEA
                     RHPLIPA"
BASE COUNT          285 a          466 c          472 g          312 t
ORIGIN      
        1 ggttgacgca atggccggtg actgccgagg cggtgggaat tttcaccccg cacgagcgcg
       61 acgcgctttt cgtgcaatat gtcaatcacg cgccgcaggc gcgcattctc gctgacaagg
      121 cggatgtcgc gtggggcggc gaatcgtcga tcgtggcagc gatcacagtt cttgagcagc
      181 gaggcgcgcg gcaggaccgg atcgcgacaa tcggaccggt cagcgccgag cagcactcgg
      241 cgttatcggc gaaatttgga aagctgaaag gtcttaatcg caattacgtc cgtctgcgtc
      301 aggtcaaatc cgccgaagaa ctcgattggc ttcgcatcgg cgcgcatttc agcgatcttg
      361 gcatggcggc gctgcgcgac ggactgaagc ctggcctgaa cgagcgcgag ctgggagatt
      421 tggtcgagcg cgtttacgtg ccgcacggcg cgaccaacgt cattcattat atcggcgtca
      481 catcgatgaa aatgcccgag cttggcgtgc cccgccagtt ccctcgcatg cgtcgggtgc
      541 agactggcga tgtggcggtg gccgaaatca gcgccgcatt ctgggagcac cctggccaga
      601 ttcttcgcag tttcgctctc ggggagccga gcaagcttta caaagaattg cacgccgcag
      661 ccgacgccgc ctttgatgca atcgcgggtg tcgtcaaggc tggcgccaca cccgcgcagg
      721 cgatcgaggc atccgcagtg atcgaagagg cgggcttcac catcattgac gatctgttgc
      781 atggctatgg cggcggctat ctgccgccta ttcttggctg caatagccgc ccggccggac
      841 cgataccgca agagcccttt cgcgccgggc agaccgtggt gatccagccc aatatcgtca
      901 cgccggatgg caaggccggc gttcagaccg gcgagatggt gttgattact gataacggca
      961 tcgagcggct gcacggcatg ccgcgcggat ttttggtgct ctgaactttt ccgcaggcat
     1021 gccgggcgcc taagcgggaa ttaggggatg acgagcctct cccaactgct ccttcatcca
     1081 atccgcgctc tgcgaccgcc agcgataggc gcgattggtt gcgatgtgat tgccgtcttc
     1141 aatcatcatc aatgtaaccg gccctttcgc ctcccgcgcc agacgttctg catccctggc
     1201 ggggacgatg cggtcgagcc ggccgttcac gatgaagagc ggacaggtga tcgcttgtgc
     1261 caaaccttcg agagataatg tctcggcgtt tttgcgcgca tcttcctgcg tcctgcaatg
     1321 gctgcgtacg cgaaaggctt cacgcgtcaa ttccggtagt ccatcccagg ctgcgcccca
     1381 gttaaatggc cctcccaggg ctatgcaggc cttgatgcgc ttgtcgaacg ccgtcgcgcg
     1441 cggtgcgtag tatccgccca ggctaacgcc ccacattcca atccgatcag tgtcgaggtc
     1501 cgagcgtttc tgtacaaagt cgatcaccgc cttca
//
LOCUS       DATDHO010000982         1964 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_245871, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000982 DATDHO010000000
VERSION     DATDHO010000982.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1964)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1964)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1964
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_245871"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..165)
                     /locus_tag="VIY07_19215"
     CDS             complement(<1..165)
                     /locus_tag="VIY07_19215"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HEY6383925.1"
                     /translation="MDFFWTYLWPVIVIVTQSLLLLVILLIAVAYILLADRKIWAAVQ
                     IRRGPNVVGPW"
     gene            complement(170..1964)
                     /gene="nuoG"
                     /locus_tag="VIY07_19220"
                     /pseudo
     CDS             complement(170..1964)
                     /gene="nuoG"
                     /locus_tag="VIY07_19220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403268.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
BASE COUNT          387 a          626 c          582 g          369 t
ORIGIN      
        1 ccacggaccc acgacattcg ggccgcgcct gatctgcacc gctgcccaga tcttgcggtc
       61 agcaaggaga atgtaggcga ccgcaataag caggatcacc agcagcaaca atgattgcgt
      121 cacgatcacg atgacaggcc agagataggt ccagaagaaa tccatcgccc tactccgcgg
      181 ccgtcatcga gggtttcttg gccgccgcct gtgccagagc cgagcactcg gccatgatcg
      241 ccgaggcgcg cgcgatcgga ttggtgaaat agaaatcggt gaccgctgaa cgcagcgaag
      301 ccttttcatg gcttccgcca agttttgcca gcttcgcgat gtcgcccgcg tcgcccgggg
      361 caatctgccc cacgcgcatc agatgcggat gggctttgaa catcgcctgc cgcaacgcat
      421 cgagcgaatc gtacggaagc ttcgacccga gggcgtcgga aagggcgcgc agaatagccc
      481 aatcctcgcg cgcgtcgccc ggaggaaacg cagccctggt ggccatctgc acgcggcctt
      541 cggtgttgac gtagatcgcg gatttttccg ggtaggcagc gccgggcagt atcacgtcag
      601 cccgatgtgc gccgcggtca ccatgcgtgc cgatgtaaac aacaaaaggc ttggccgaaa
      661 cctcgatctc gtcggcgcca aggaggaaca acacgtcgac cttgcctgcg gccatctgcg
      721 ccgcatcgag accaccggcg ccgggcacga ggccgaggtc gagcgcagcg acacgctagg
      781 ctgcgttatg caaaaccgag aagccgttcc agccatcctt cattgcgcca aactcgaccg
      841 ccgctttggc ggcaagcgag gcgacagccg cgccgtcctt ccgcgtgaaa gcgcccgcgc
      901 cgaggaggat gagcgggcgt tccgacgcct tcagcgcgtc agcaaatttg ccttgcgcaa
      961 ggtcggctag ggtctcgccc cccgaaccga gataatcata tgtgtaagtc agatcggcct
     1021 tctgcccgat cagaccgatt ggaaaatttc cggcccgcca gcgtttgcga atgcgggcgt
     1081 tgaggaccgc cgcctcgcgt cgagggttcg cgccaatgat cagcagcgca tcggcctgtt
     1141 cgattcctgc gatcgtggca ttaaacaggt aggtagctcg gccccaattt ggatcgagaa
     1201 ccgagccatc ctggcgcgcg tcaatattgg cgctgcccag tcgcatcatg agatccttga
     1261 gcgcaaacat ttcttccgcg ccggcaaggt ctccgactat ggcgccggcg cgtttgccgc
     1321 cgctcgtttt catcttttcg gcgatcaccg agaaggcttc tctccacgat gccggttgca
     1381 gacgcccgtt cgtgcgcaca tagggctgat ccagccgctg cgtgcgcaat ccatcgacga
     1441 catggcgtgt cttgtcggaa atccactcct cgttcacgtc gtcgtttacg cgcggcagaa
     1501 ttcgcatgac ttcgcggcct cgcgtgtcaa tgcgaatggc cgagccgacg gcatccatca
     1561 catcgataga ctgcgtcttg ttcagctccc acggccgcgc ggcgaaagcg tagggcttgg
     1621 acgtcagcgc tccgaccggg caaaggtcga ccacattgct ttgcagctcg gacgtcatcg
     1681 catgttcgag ataggtggtg atctccatgt cctcgccgcg cccgatggca ccgagctcag
     1741 gaacgccggc aacctcggtc gagaaacgga tgcaacgcgt gcagtgaatg cagcgcgtca
     1801 taatcgtctt gaccagcggg ccgatatatt tgtcctcgac cgcgcgcttg ttctcctggt
     1861 acctgctcgc atccacgcca taggccatgg cctggtcctg cagatcgcat tcgccgcctt
     1921 gatcgcaaat cgggcaatcg agcggatgat tgatcaacag gaat
//
LOCUS       DATDHO010000983         2193 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_94698, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000983 DATDHO010000000
VERSION     DATDHO010000983.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_94698"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..825)
                     /locus_tag="VIY07_19225"
     CDS             complement(<1..825)
                     /locus_tag="VIY07_19225"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF036497.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HEY6383926.1"
                     /translation="MASEAVEAERRNQQIEHIRDYFAKRGRLHSVAFRIRAANRDECK
                     NRAFAEIGLEAGTIESLPREYRSFAHDALSAIWTQATVLSVAETSPAALAGIKPGDHV
                     LTFNNEAVPRSGTSGWIARFVRNNGDRPIRVLIRRAGVDDIRMVYPVLVCSIPIHLTT
                     DPVPNAFTTGDKIVIHSSLLRIARSDAQLALVVGHELAHVTLGHLEKQKANEFLGEAS
                     GFMIDAGILLATKLWTGGLFKRQLGHAGRLAFSVDFERRPIMSAPTMQHVPATILLA"
     gene            complement(1012..1791)
                     /locus_tag="VIY07_19230"
     CDS             complement(1012..1791)
                     /locus_tag="VIY07_19230"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008138003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEY6383927.1"
                     /translation="MVQLTLPQNSKITEGRRWPRTPHATHVSEFRIYRWNPDDGQNPS
                     IDTYYVDRDDCGPMVLDALIWIKNTIDPTLTFRRSCREGVCGSCAMNIDGTNTLACTK
                     AIDDSRAPVRIYPLPHQPVVKDLVPDLTNFYAQYASIEPWLQTVSPTPEKEWRQSHHD
                     RAKLDGMYECILCACCSTSCPSYWWNSERYLGPAALLQANRWVQDSRDEAPGSRLDNL
                     EDPFRLYRCHTILNCSKACPKGLNPAKEIARLKKALVDRRL"
BASE COUNT          438 a          621 c          663 g          471 t
ORIGIN      
        1 tgccaacaag atcgtagccg gcacgtgctg catagtaggc gccgacataa tcggcctccg
       61 ttcaaaatcg acgctgaacg ccagtcgccc tgcgtggccg agctgtcttt taaacaagcc
      121 gccagtccat agtttcgtcg ccagcaggat gccagcgtcg atcatgaatc cgctggcctc
      181 tccaagaaac tcattggctt tctgcttctc gagatgtccg agggtgacat gcgcgagctc
      241 gtgtcccacg accagggcaa gctgtgcatc gctgcgcgca attcgcaaaa ggctggagtg
      301 aatgacgatc ttgtcgccgg tcgtaaatgc gttcggcaca ggatcggtcg tcaggtgaat
      361 cgggattgag cagaccagca ccggatacac catgcggatg tcgtcgacgc cagcgcgccg
      421 gatcagaact cgaatcggac ggtcgccgtt gttgcgcaca aagcgcgcga tccacccact
      481 cgtaccggag cggggcaccg cctcgttatt gaatgtcaga acgtggtcac caggttttat
      541 ccccgcgagt gcggcgggcg atgtttcggc aaccgacagt acggtcgcct gtgtccagat
      601 ggccgaaagc gcgtcgtggg cgaatgagcg gtactctcgc ggcaagctct caattgtgcc
      661 tgcttccagg ccgatctccg cgaacgctcg attcttgcac tcgtcacggt tggcggcgcg
      721 gatgcggaag gcgacactgt gaagacggcc acgtttggca aagtagtccc ggatatgctc
      781 gatttgctgg ttgcgccgct cggcttcgac tgcctcggat gccaatggag gcaatttcga
      841 aatcggtccg caggctgcgc aaacgaggct actggccaat aagaacctga aagtcggacg
      901 cacgcacgca atcccgcaaa cgcggcaacc tgctccaggg aaagcgcgta tcagaaatac
      961 acagtgcttg cgtcgtcttt tcggccgaga aactgtggcg gccgaaaccg ttcaaagtcg
     1021 ccggtcgacc agcgccttct tcagccgggc gatttccttt gccgggttaa ggcccttggg
     1081 acaagccttt gagcaattca ggatggtgtg acagcggtac agccggaacg gatcctcgag
     1141 gttgtcgagg cgcgatccgg gcgcctcatc acggctgtcc tgtacccaac ggttggcttg
     1201 aagcaatgcc gccggcccca gatagcgttc agaattccac cagtagcttg gacaggatgt
     1261 cgagcagcac gcgcacagga tgcactcgta catgccgtcc agcttggcgc ggtcgtggtg
     1321 gctctgtctc cactccttct cgggagtcgg actcacggtc tgcagccacg gctcgatcga
     1381 tgcgtactgc gcgtaaaaat tcgtcaaatc agggaccaga tctttcacaa caggttggtg
     1441 cggcaacgga tagattctta ctggcgcacg cgaatcatcg attgccttgg tacaggccaa
     1501 cgtgttcgtg ccatcgatgt tcattgcgca cgagccgcat acgccttcgc ggcaggaacg
     1561 gcggaaggtg agcgtcggat cgatggtgtt cttgatccag atcagggcat cgagaaccat
     1621 tggcccgcaa tcgtcgcggt caacgtagta agtatcgatg cttggatttt gcccgtcgtc
     1681 gggattccag cggtagatcc ggaattcgct cacatgagtc gcatgcggcg tgcgcggcca
     1741 tcttctgcct tcggtgatct tggagttttg cggcagggtc aattggacca tggcagcctc
     1801 tttgcgtttc gaggatcagt tatgtttgat gtcatatcgt gcgtgtgacc gacaggggtg
     1861 atagtcggcc tgtgcatggc ccgtttctcg atgactacca acgcaggata gaaatgcagg
     1921 ccgtgcactg aattggcgag tgcgcctttt ccacttgttg accgcgtttc cgatatgagt
     1981 tgcggcgatt cggtcgagct cggatcgggc gcacaaaacg cagacacgcg gcgcagcccc
     2041 ttcaacgttc gggatcgaat gccaagctgc atcgagctgc tcattagtac acgcgggctt
     2101 gcggctcgat ataggcgacg tcgttcgtga gtgtgtacgt gtgaacgggg cggtaatcga
     2161 gcttcacggc gcccttgtcg tccatccacg cca
//
LOCUS       DATDHO010000984         4935 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_47756, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000984 DATDHO010000000
VERSION     DATDHO010000984.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4935)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4935)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4935
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47756"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(78..749)
                     /gene="msrA"
                     /locus_tag="VIY07_19235"
     CDS             complement(78..749)
                     /gene="msrA"
                     /locus_tag="VIY07_19235"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012111075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEY6383928.1"
                     /translation="MFGFKKVAMPKAGEALPGRADPIRTAATHFVNHRALKGPYPEGT
                     EKAMFGLGCFWGAERKFWELGEGIHVTAVGYAGGMTPNPTYEEVCSGRTGHNEVVLVI
                     YDPKKISYDTLLKTFWESHDPTQGMRQGNDVGTQYRSGIYTFNAAQKQASEASKAMYE
                     QELKKKRYGAITTEIVEAPEFYFAEDYHQQYLAKNPFGYCGLGGTGVSCPIGSGAKLA
                     QSATA"
     gene            complement(861..1181)
                     /locus_tag="VIY07_19240"
     CDS             complement(861..1181)
                     /locus_tag="VIY07_19240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383929.1"
                     /translation="MIRFVLRFIGLICLAAAFILLIYDGTKSIAGNRLFLTSVRSLWE
                     LINAASLAKLEPTIQSYVGGYLWDPLMVSVLASPSWGVLGVLGILFLLLGRKKKPLIG
                     YARS"
     gene            1319..3598
                     /locus_tag="VIY07_19245"
     CDS             1319..3598
                     /locus_tag="VIY07_19245"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HEY6383930.1"
                     /translation="MPAKPPAGHNRPTFTDQEALQFHSVGRPGKLEVIATKPMATQRD
                     LSLAYSPGVAVPVLAIAEDESRAYDYTTKGNFVAVITNGTAILGLGNRGALAAKPVME
                     GKAVLFKRFADIDSIDLEVSSEDPDEIVNCVKLLGKGWGGINLEDIKAPECFVIEQRL
                     RELLDIPVFHDDQHGTAIIAAAGLLNALHLTGREIATTKLVCNGAGAAGIASLELLKA
                     IGFKPENLILCDTKGVIYQGRKDGMNQWKSGYAIKTSARTLAQALEGADVVFGLSVKG
                     AVTQDMVKKMAPKPIIFAMANPDPEITAEEVAAVRDDAIMATGRSDYPNQINNVLGFP
                     YIFRGALDVRASAINMEMKIAAAHALAALAREDVPDEVASAYGARPKFGPDYIIPVPF
                     DPRLISFVPPAVAKAAMDTGVARKPIVDMGAYRHQLNARRDPIAGTLVQVYDRLRRQP
                     KRVVFAEGEEEQVIRAACSFVHQGLGSALLVGREDRVRQSARDNGIELGEGIEIVNAR
                     LSTRNASYINYLYERLQRRGYLVRDCQRLVNQDRNHFAACMVALGDADAMVTGVTRNF
                     SVALEDVLRVIDPKPGHRVIGVSVVVARGRTVLVADTAVTEMPDAHEIAEIAIEAAGV
                     ARRLGYEPRLALLAFSTFGHPPGERSARVIEAVKILDGKRVDFEYDGEMAADVALNPE
                     LVSAYPFCRLSGPANVLVMPAFHSASISTKMLQELGGATVIGPLLVGLDRPVQIVQLG
                     AKDNQLVNMAALAAYNVSG"
     gene            3656..4549
                     /locus_tag="VIY07_19250"
     CDS             3656..4549
                     /locus_tag="VIY07_19250"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HEY6383931.1"
                     /translation="MTQRLSGVIAAIATPIDENGAPDLKRAINLARYLLDNGCDGLNV
                     LGTTGEATSFSVDERKSVMDAYKQNGLPLQRLMVGTGAASVSDAVALTRHAAELGFAG
                     ALVLPPFYYKGVPDEGLIAYIDTLIKATERKPIPIYLYHFPAMSGVPWQVPLIRRLLD
                     SFPSRIAGLKDSSGDMGYARSAAAISRNFAVFPSTEAALLEARQGDFAGCISATANLN
                     ADLCAQAWSRGDGSALNAAVAIRKLFDGKPLVSGVKALLAHIHGDPALSRVRPPLAPF
                     SAADRASVIAGHDAVRARRVA"
     gene            4699..>4935
                     /gene="rpsT"
                     /locus_tag="VIY07_19255"
     CDS             4699..>4935
                     /gene="rpsT"
                     /locus_tag="VIY07_19255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEY6383932.1"
                     /translation="MPNTKSARKATRVIARRTEANKARRSLLRNSVRKVEEAIQSGDR
                     NAALAALKAAEPAIMRAAQKGIVHKNNASRKVSRL"
BASE COUNT          967 a         1526 c         1499 g          943 t
ORIGIN      
        1 atttctgggt ccccgctttc gcggggacga acggagaagt atgcgttagc tgagccctcc
       61 ccacgccgag ctgcagctca agccgtcgcg gattgcgcca gcttcgcgcc actgccgatg
      121 gggcaagaga cgccggtgcc gccgagtccg caatagccga aaggattctt ggccagatac
      181 tgctggtgat agtcctcggc gaaatagaac tcgggcgctt cgacaatctc ggtcgtgatt
      241 gcgccataac gcttcttctt cagctcctgc tcgtacatcg ccttcgaggc ctcggacgcc
      301 tgcttctgcg cggcattaaa tgtgtagatg ccggagcgat attgcgtgcc gacgtcgttg
      361 ccctgacgca tgccttgcgt cgggtcgtgg ctttcccaga aggttttcag cagcgtatcg
      421 taggaaatct tcttgggatc atagatgacc agcaccacct cgttgtggcc ggtacgcccc
      481 gagcagactt cctcgtaagt ggggttgggc gtcatcccgc cggcatagcc gacggcggtg
      541 acatgaatac cctcacccag ttcccagaac ttgcgctcgg cgccccagaa gcagcccagt
      601 ccaaacatcg ccttctcggt gccttccggg taggggccct tcagcgcacg gtgattgacg
      661 aaatgggtgg cggccgtccg gatcgggtcg gcgcggcccg gcaatgcctc gccggccttg
      721 ggcatggcaa ctttcttgaa gccaaacatg cggggatctc ctgcaatcgc tgcaggtaat
      781 ataggtctga tcagagccca tcgaaaccgc cccgtgatca cgtgctggtc aacatcgtca
      841 atggcgatgt cgcgccggca tcaggatcgc gcgtagccga tcagcggctt tttcttgcgg
      901 cccagcagaa gaaacaggat cccgagaact ccgagcaccc cccaactggg cgatgccagc
      961 actgacacca tgagcgggtc ccagaggtag ccgccgacat aagattgaat ggtcggttca
     1021 agcttcgcga ggctcgccgc gttgatcagc tcccacaggc tgcgcacact ggtcagaaac
     1081 agcctgttgc cggcgatcga tttggtcccg tcgtagatca acaggataaa tgcggccgcc
     1141 aggcatatta gtccgataaa gcgcagcaca aaacggatca tgacccccac catcgtccgt
     1201 gttgagggat taccctgcga cgcgccttcg cacaacagcc gccttccctt gagtcagatc
     1261 ggcagcatcc gctaacgtcc ccggcgccgg cgcaaccggc cgcgttcatg gagtcccaat
     1321 gcctgccaag ccgcccgccg ggcacaaccg gccaacgttt accgatcagg aagccctgca
     1381 atttcacagc gttggtcggc caggcaagct ggaagtcatc gccaccaaac caatggcgac
     1441 ccagcgtgac ctgtcactcg cttattcgcc gggtgtcgcc gtgcctgtgc tcgctatcgc
     1501 agaggatgaa tcgcgagcgt acgactacac caccaaaggg aacttcgtcg cggtgattac
     1561 caacggaacg gcgattctgg gtctcggcaa ccgcggcgcg ctggcggcaa agccggtcat
     1621 ggaaggcaag gcagtcctgt tcaagcgctt tgcggacatc gattcgatcg atctcgaggt
     1681 ttcatccgag gaccccgatg agattgtcaa ttgcgtaaag ctgctgggaa agggttgggg
     1741 cggcatcaat ctggaagaca tcaaggcgcc ggaatgcttc gtgatcgagc agcgcctgcg
     1801 cgaactgctg gatattccgg tctttcacga cgaccagcat ggcaccgcca tcatcgccgc
     1861 cgccggcttg ctcaacgcgc tgcatttgac cggacgcgag atcgcaacca cgaagctcgt
     1921 ctgcaacggc gcgggtgccg ccggcatcgc cagcctcgag ttgctgaagg ccatcggttt
     1981 caaacctgag aatctcatcc tttgcgacac aaaaggcgtg atctaccagg gccgcaagga
     2041 tgggatgaac caatggaagt ccggttacgc catcaagaca tccgcgcgaa cgctcgcgca
     2101 ggcgctggaa ggcgccgacg tagtcttcgg cctctcggtc aagggcgccg tgacgcaaga
     2161 catggtgaag aaaatggcgc cgaagccgat catcttcgcc atggccaacc cggatccgga
     2221 gattacggct gaagaagtcg ccgcggtgcg cgacgacgcg atcatggcga ccgggcgatc
     2281 cgactatcca aatcagatca acaacgttct cggctttccg tacatcttcc ggggagcgct
     2341 ggacgtgcgg gcctccgcca tcaatatgga gatgaagatt gccgctgcgc atgcgctggc
     2401 cgcgctcgcg cgcgaggatg tgcccgacga ggtcgcgagc gcatacggcg caaggccgaa
     2461 attcggtccc gactacatca ttcccgtgcc gttcgatccg cgcctgattt cattcgtacc
     2521 tccggccgtt gcgaaagctg ccatggatac gggcgtggca cgcaagccga tcgtcgatat
     2581 gggcgcctat cgtcaccagc tgaacgcgcg gcgggacccg atcgcgggga ctttggtgca
     2641 ggtgtacgat cgcctgcgcc gccaacccaa gcgcgtggtt ttcgcggaag gcgaagaaga
     2701 gcaggtgatc cgcgctgcgt gcagcttcgt gcatcaaggt ctcggcagtg cgctcctggt
     2761 cggccgcgaa gaccgcgtac ggcaatccgc ccgcgacaac ggcattgaac ttggcgaggg
     2821 catcgaaatc gtcaacgcac ggctctcgac ccgaaacgcc tcctacatca attacctcta
     2881 cgaaaggctg cagcggcgcg gctacctggt gcgcgattgt cagcgtctgg tgaatcagga
     2941 ccgcaatcac ttcgctgcgt gcatggtcgc gctcggtgat gccgacgcga tggtgaccgg
     3001 cgtcacccgc aatttctccg tcgcacttga ggacgttctg cgtgtcatcg accctaagcc
     3061 cggacaccgg gtgatcggcg tttcggtcgt tgtggcacgc ggacgaacgg tattggtggc
     3121 ggacacggcc gtgaccgaga tgcccgatgc gcatgagata gcggagatcg ccatcgaagc
     3181 agccggtgtg gcgcgtcgtc tcggctatga accgcggctg gcgctgcttg ccttctccac
     3241 cttcggacat ccgccaggtg aacgctcggc gcgcgtcatc gaggcggtga aaatccttga
     3301 cggcaagcgg gtcgattttg aatacgacgg tgaaatggct gccgacgtcg cgctcaaccc
     3361 ggagctggtg tcggcctatc cgttttgccg gctttcaggc ccggcgaacg tgctggtcat
     3421 gccggcattt cactcggcct cgatctcgac aaagatgctg caggagcttg gcggcgctac
     3481 ggtcatcggc ccgctgttgg tcgggctgga ccggccggtc cagatcgtgc agttgggagc
     3541 caaggacaac cagctcgtca atatggctgc gcttgccgcg tataatgtga gtggatagcg
     3601 aatagcatgc ggtcaggacc gtcatttcta ttcgcctgta gaacgaggaa ttcgaatgac
     3661 tcagagactg tccggcgtca tcgccgctat cgccacgccg attgacgaga atggcgcgcc
     3721 cgatctcaag cgcgcgatca atttggcgcg ttacctcctc gacaatggtt gcgacgggct
     3781 caacgtgctt gggaccacgg gtgaggctac ctcgttctcc gtcgacgagc gcaaaagtgt
     3841 catggatgcc tacaagcaga atggcctgcc gttgcagcgt ctgatggtgg ggaccggcgc
     3901 tgcgtcggtg tccgatgcag tcgcgctgac acgccatgcc gcagagctcg gattcgccgg
     3961 cgcgctggtg ctgccgccct tctattacaa gggcgtgccg gacgaagggc tcattgctta
     4021 catcgacacc ctgatcaagg cgacggagcg aaagccgatc ccgatctatc tttatcattt
     4081 tccagccatg tcaggcgtgc cctggcaggt gccgctgatc cgccgcctgc tcgattcttt
     4141 cccgtcgcgc attgccggcc ttaaggattc ttcgggcgac atgggttacg cgcgctccgc
     4201 agcggccatc tccaggaatt ttgccgtatt tccatcgacg gaggcggccc tgctcgaagc
     4261 gcgccaagga gatttcgccg gctgcatctc ggcgaccgca aacctcaatg ccgacctgtg
     4321 cgcgcaagcg tggagccgag gcgacggcag cgccctcaat gcggcggtgg cgatccgaaa
     4381 gctcttcgat ggcaagcccc tggtgtcggg cgtcaaggcg ctccttgctc acattcatgg
     4441 agacccagca ctgtcgcgcg taagaccgcc cctggcgcct ttctctgccg cggatcgcgc
     4501 gtccgttata gccggacacg atgcggttcg agcgaggcgc gttgcctgaa gtacagatcg
     4561 cgcgggcgtt gacgcgtgcg tgcagcctca ctataagcct cccccttggc ggcaaaattt
     4621 cttgccgccg taacctgttg taatcctgat cgctttcgcg gatatccgcc ggaggcggct
     4681 gctgcgaatg agaaattgat gcccaacacg aagtctgccc gcaaagccac acgtgtcatt
     4741 gcccgccgaa ccgaagcgaa taaggcgcgg cgttcgctgc tgcgaaattc ggtccggaaa
     4801 gtcgaggaag cgatccaaag cggtgatcgc aatgcggcat tagccgcact caaggccgcg
     4861 gagccagcca tcatgcgagc ggcacaaaaa ggcatcgttc acaaaaacaa tgccagtcga
     4921 aaagtatcgc gcctc
//
LOCUS       DATDHO010000985         4804 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_395200, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000985 DATDHO010000000
VERSION     DATDHO010000985.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4804
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395200"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..635)
                     /locus_tag="VIY07_19260"
     CDS             complement(<1..635)
                     /locus_tag="VIY07_19260"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HEY6383933.1"
                     /translation="MDVLMPQLGETVAEGKITKWFKSAGDVVKPGDNLFEIETDKTSM
                     EVPSTTSGTLTEIHFQVGEVAKVGAVVAVISSSGTATSSAAAAAGSTGGTSSPIIPAP
                     AGIQSQTDLGSPFRGNERPAAPVPRAVPMDPFREVRTPERNYGPARLASGTTVTPLAR
                     RLAGERGIDLTRVAGSGPHGRIVARDIEQAASAPAAIATGADAAQIKALYEG"
     gene            complement(659..2110)
                     /locus_tag="VIY07_19265"
     CDS             complement(659..2110)
                     /locus_tag="VIY07_19265"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEY6383934.1"
                     /translation="MYENLLANVPTDLWIGGKWRKASDGGRFDVIDPATERKIASVAS
                     ATVDDAKAALDAAEGAFEGWSGRKPRERAEILRKAFELIMRDAERFAKLITLENGKAL
                     PDSRSEVAYAAEFFRWYAEEAVRNVGEVSRAPASGARILVHHKPAGIAVLVTPWNFPA
                     AMATRKIGPALAAGCPVVLKPASDTPLTMLALMPALEEAGVPAGVVNVIPSRSSGKVV
                     SALLHDPRVRVLSFTGSTAVGRQLLHEAADNIVKPAMELGGNAPFIVFEDADIDAAID
                     GAMVAKMRNMGEACTAANRFYVHEKVHDEFAKKLTAKMGSLKMGNGLDEGVNLGPLVN
                     KDGRDKVIELVDDAVKKGAKVLVGGKLPDGPGFFYPATVLTNVPDSAKMLNEEIFGPV
                     ASIQTFKSEDEAIKRANETEYGLVAYLYTKDLSRGMRVSEQLDFGMVGLNRGLVSDPA
                     APFGGTKQSGLGREGAHEGMMEFLETQYVSVSW"
     gene            complement(2197..3177)
                     /locus_tag="VIY07_19270"
     CDS             complement(2197..3177)
                     /locus_tag="VIY07_19270"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEY6383935.1"
                     /translation="MAELTYRDAVIRGIAQEMERDPDVVFLGEDVGKPGGVFKATVGL
                     YEQFGPLRVRDTPISEQAILGAAMGAAMTGLKPIAEIMFSDFFAVCFDYIANEFPKSR
                     YMSNGQVKCPLVVRTGNGAGSRFGAQHSQSVENWCMMIPGLKVVAPSSPRDVIGLMAA
                     SVRDPDPVIFLEHKSLYPTKGEVPDGEIVDTLGTAKILRSGKDATICALALMVPRALA
                     AAEKLKTEHGIDCEVVDVRSLVPLDTQTILGSVAKTHRLFTVEENPRLCGWGAEIVSI
                     AADEAFYDLDGPPVRITTPHIPLPAADILEDAVLPTPDRIAETVRRSMNS"
     gene            complement(3165..4199)
                     /locus_tag="VIY07_19275"
     CDS             complement(3165..4199)
                     /locus_tag="VIY07_19275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008873014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEY6383936.1"
                     /translation="MATAKDRAQAKAGSGLNDDIGEEKRLELYRLQVVIREAEQRAYD
                     LFLQNLVKGTSHLSIGQEAVAAGFAGAMQPGDLSFCTYRGHAHTLARGVSVEKVLGEL
                     MQRDNGLMRGKGGSMHLTSVDHGVMGSYAIIGAHLPIACGAAWRAQYKGAKDVSVCFF
                     GDGTTNIGAFHEALNFAAVWKLPVVFVCENNLYMEYTPIADVTAVPQPAADRASAYGL
                     ERIVIDGNDADVVYRTAQTAYDKARAGAGPSLIECLTYRHSGHSRADPAKYRPEGELD
                     RWKQRDPIKIYRERLLQFGVAEKVIANIDAEVRKIVDDATEACKAAPPPPLDIISTDV
                     YADGGWAWRN"
     gene            complement(4263..>4804)
                     /locus_tag="VIY07_19280"
     CDS             complement(4263..>4804)
                     /locus_tag="VIY07_19280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEY6383937.1"
                     /translation="DEWVGWRRWAAIGVGFFGVLLVARPGLGGLHPAALLTFGAAVCY
                     ALYSISTRVLARSDSSETTLFYSNLVGAVAMLPIIPFVWTTPQNALVVALMVLIGALG
                     SGGHYLLIRAHRLAPASTLAPFIYTQMVWTTALGFLVFGDVPHFWTIVGGSIVIASGL
                     YLLHRETVRGKREPSAPVA"
BASE COUNT          898 a         1560 c         1430 g          916 t
ORIGIN      
        1 ccctcgtaca gggcctttat ctgggctgcg tcggcgcccg tggcgatggc agccggagcc
       61 gacgctgcct gctcgatgtc gcgggcaaca atgcgtccgt gcgggccgga gccggctacg
      121 cgtgtcaggt cgatgccacg ctcgcccgcc agccttcgcg cgaggggagt taccgtggtg
      181 ccgcttgcaa gccgtgcagg accgtagttg cgctcagggg ttctcacctc gcggaaggga
      241 tccatcggca cggcacgagg aacgggcgct gccggccgtt cgttcccgcg aaagggggaa
      301 cccaggtctg tctggctctg gattcccgct ggtgcgggaa taatcggtga tgatgtgccg
      361 cccgttgaac ccgcagcggc agcggctgaa cttgttgcgg tccccgagct cgaaatcact
      421 gcaaccaccg cgccgacctt tgccacctcg ccgacctgaa agtgtatttc ggtaagcgtg
      481 ccgctcgtgg tcgacggcac ttccatcgag gtcttgtcgg tctcgatttc gaacaggtta
      541 tcgcccggct tcaccacatc gccggctgac ttgaaccatt tggtgatctt gccctcggca
      601 acagtctcgc cgagctgcgg catcagaacg tccacgcgct tgtccccgat tccgctgcct
      661 accagctcac cgaaacatac tgcgtttcga ggaattccat catgccctca tgcgccccct
      721 cgcgaccgag cccggactgc ttggtgccgc cgaacggcgc ggccggatcg gagaccaggc
      781 cacgattcag acccaccatc ccgaaatcga gctgctccga aacgcgcatg ccgcggctca
      841 gatccttcgt gtacagatag gcaaccaggc cgtattcggt ttcgttggcg cgcttgatcg
      901 cctcgtcttc gctcttgaag gtctggattg atgcgaccgg tccaaagatt tcctcgttca
      961 gcatcttggc cgagtccggc acattggtca gcacggtagc ggggtagaaa aatccgggac
     1021 catccggcaa ttttccgccg accaatacct tggcgccttt cttcacggca tcgtcgacca
     1081 gttcgatcac cttatcccgg ccgtccttgt tgaccagcgg gccaaggttg acgccttcat
     1141 caagcccgtt gcccatcttc agcgaaccca tcttggcagt gagttttttc gcaaactcgt
     1201 cgtgcacttt ctcgtgcacg tagaaacgat tggctgcggt gcaggcttcg cccatgttgc
     1261 gcatttttgc gaccatggcg ccatcgatcg ccgcatcgat gtcggcatcc tcgaacacga
     1321 taaacggcgc gttgccgccc agctccatcg ccggcttgac gatattgtcg gcggcctcgt
     1381 gcagcagctg gcgccccacc gcggtggagc cggtgaaaga cagaacgcgc acgcgcggat
     1441 cgtgcagcaa ggccgagacc actttgcccg atgaacgcga aggaatgacg tttacgacac
     1501 cggcgggcac gccggcttcc tccagtgccg gcatcagcgc gagcatggtg agaggcgtat
     1561 cggacgcagg cttgagaaca accgggcagc ccgcggcgag tgcggggccg atcttgcgcg
     1621 tggccatggc cgcggggaaa ttccatgggg tcaccagcac ggcaatgccc gccggcttat
     1681 gatgcaccag aatgcgcgcg cctgaggctg gcgcgcgcga gacctcgcca acattgcgca
     1741 ccgcttcctc ggcataccaa cggaagaact ccgcggcata agcgacttca gaacgtgaat
     1801 ccggcagggc cttgccattc tccagtgtaa tcagctttgc gaagcgctcg gcgtcgcgca
     1861 tgatcagctc gaaggccttg cgcaggatct cggcgcgctc gcgcggtttg cggcctgacc
     1921 aaccctcgaa agctccctct gcggcatcaa gcgcggcctt ggcatcgtct acggtcgcgc
     1981 tggcaaccga cgcgatcttg cgctccgtcg cggggtcgat cacgtcgaag cggccaccgt
     2041 cggacgcttt gcgccatttg ccgccgatcc acagatcggt cggaacattg gcgagaagat
     2101 tctcgtacat gattacctca actttccgtt cattcccccg caagctgaat gaagaggcag
     2161 gcgtgggtcc acgctttcac gggaacgaac gagatatcaa ctgttcatcg atcgtcgcac
     2221 cgtctccgca atccggtcgg gcgtcggcag cactgcgtct tccagaatat cggcggccgg
     2281 cagcggaata tgcggcgtcg tgatgcgaac cggtggaccg tcgagatcat aaaaggcctc
     2341 gtctgccgcg attgacacga tctcggcgcc ccatccgcat agccgcggat tttcctcgac
     2401 ggtgaaaagc cgatgcgtct tcgcgaccga tccgagaatg gtttgcgtgt cgaggggcac
     2461 cagcgagcgt acatcgacaa cttcgcaatc gatgccgtgt tccgtcttga gcttctcggc
     2521 agcagcgagc gcgcgcggga ccatcaatgc cagggcgcag atggtggcgt ccttcccgga
     2581 ccgcaggatc tttgccgtgc cgagtgtgtc gacaatctcc ccgtcaggaa cctcgccttt
     2641 tgtcgggtac agcgacttgt gctccaggaa gattaccgga tcgggatcgc gaaccgaggc
     2701 ggccatcagt ccgatgacat cgcgcgggct tgagggcgct acgaccttga gacccgggat
     2761 catcatgcac cagttctcga cgctctggct gtgctgggcg ccgaaacgcg aacctgcgcc
     2821 gttgcccgta cgcaccacca gcgggcactt gacctgcccg ttcgacatat agcggctctt
     2881 ggggaattca ttggcgatgt agtcaaagca gaccgcgaag aaatccgaga acatgatttc
     2941 ggcaatcggc ttcaggccgg tcatcgccgc acccatggcg gcaccaagaa ttgcctgctc
     3001 ggaaattggg gtgtcacgca cgcgcaatgg tccgaactgt tcatataaac cgacagtcgc
     3061 cttgaacact ccgcccggtt tgcccacgtc ctcacccaga aataccacgt cggggtcgcg
     3121 ctccatctcc tgcgcgatgc cccggatgac cgcgtcgcga taggtcagtt ccgccatgcc
     3181 cagcctccat cggcgtagac atccgtgctg atgatgtcga gcggcggcgg cggcgcggct
     3241 ttgcaagctt cggtcgcatc atcgacgatt tttctcacct ccgcgtcgat gttcgcgatc
     3301 actttttccg ccacgccgaa ttgcagcagc cgctcacgat agatcttgat cgggtcgcgc
     3361 tgcttccatc gatcgagctc gccctctggc cgatacttcg ccggatccgc acgcgagtgt
     3421 ccgctgtgcc ggtatgtaag gcattcgatc agcgacgggc ccgcgcccgc gcgggccttg
     3481 tcatatgccg tctgggcggt gcgatagacc acgtcagcat cgttgccgtc gatgacaatg
     3541 cgctccagcc cgtaggccga tgcgcgatca gcagccggct gcggcaccgc cgtgacgtcg
     3601 gcgatcggcg tgtactccat gtaaaggttg ttctcgcaaa cgaagaccac cggcagtttc
     3661 cagaccgcgg caaagttgag cgcctcatgg aatgcgccga tattcgtcgt gccgtcaccg
     3721 aagaagcaga ccgacacgtc cttggcgccc ttgtactggg cgcgccatgc agcgccgcac
     3781 gcgatgggaa gatgggcgcc gatgatggca tacgagccca tgacgccgtg atcgaccgag
     3841 gtcagatgca tcgagccgcc cttgccgcgc atcaggccgt tgtcgcgctg catgagttcg
     3901 cccagcactt tctccacgct gacgccgcgc gcgagggtat gtgcatggcc gcgataggtg
     3961 cagaatgaca agtcaccggg ctgcattgca cccgcaaagc ccgctgccac ggcctcctgg
     4021 ccgatcgaca ggtgactcgt tcccttgacc agattctgca ggaacagatc ataggcgcgc
     4081 tgctcggctt cccggatgac gacctgcagc cggtacaatt cgagccgctt ttcttcgccg
     4141 atatcgtcgt tgagtccgga gcccgccttg gcctgcgcgc ggtcctttgc cgtagccata
     4201 aatgatcctt cgcgatcgga ctgtctctgt agcgggcagg aacttagcgc cccgcgtgat
     4261 gattaggcaa ccggtgcgga aggttccctc tttccgcgca ccgtttcgcg atggagcaga
     4321 tagaggcccg aggcaatcac gatcgagcct cccacgatgg tccagaagtg gggcacgtcc
     4381 ccgaacacca ggaaacccag cgcggtcgtc cagaccatct gtgtataaat gaacggcgcg
     4441 agtgtcgatg ccggcgccaa tcggtgcgcc cggatgagca gataatgtcc gccgctgcca
     4501 agcgcgccaa tgagtaccat gagcgccacc acgagagcat tctggggcgt tgtccacaca
     4561 aacgggatga tcggaagcat cgccacagcg ccaaccaggt tcgagtagaa cagcgtcgtt
     4621 tcgctggagt cgctgcgcgc cagcacgcgt gtcgagatag agtaaagtgc gtaacaaacc
     4681 gcagcgccaa acgttagcaa cgccgcggga tgcagcccgc cgagtcctgg cctcgccacc
     4741 agcagcactc cgaaaaaacc gacgccaatc gccgcccagc gtcgccaccc gacccactcg
     4801 tcaa
//
LOCUS       DATDHO010000986         2526 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_47866, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000986 DATDHO010000000
VERSION     DATDHO010000986.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2526
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_47866"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..378)
                     /locus_tag="VIY07_19285"
     CDS             complement(<1..378)
                     /locus_tag="VIY07_19285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008505193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEY6383938.1"
                     /translation="MQAMALQRPRRALVMSERPVPTPAPGEIMVMVTACGVCRTDLHV
                     VDGELSNPVLPIVPGHEIVGHVRALGTGVGGFAIGDRVGVPWLGATCGICPYCRGNRE
                     NLCDKPVFTGYTRDGGFATHVIAD"
     gene            433..>2526
                     /gene="pepN"
                     /locus_tag="VIY07_19290"
     CDS             433..>2526
                     /gene="pepN"
                     /locus_tag="VIY07_19290"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEY6383939.1"
                     /translation="MRTDIAQPVHLKDYRRPDWLVETVRLDVSLHPTASRIRATLALK
                     PNPNTASAPLILDGDDLSLVSLRLNGTPLPPDSYVSSSDSLTIPQPPNAPFTLEIETI
                     VDPSANTQLSGLYRSNGTYCTQCEAEGFRRITYFPDRPDVMAIYTTRIEADKRESPLL
                     LSNGNLVESGEMPGGRHFAVWHDPHPKPSYLFALVGGDLACVEDRFLTMSGRNVTLRI
                     YIEHGKEDRTAYAMDSLKRAMRWDEEVFGREYDLDIFMIVAVSDFNMGAMENKGLNIF
                     NDKYVLASPDTATDADFAHIEAVIAHEYFHNWTGNRITCRDWFQLCLKEGLTVFRDQE
                     FSADMRSRAVKRIADVRSLRATQFIEDAGPLAHPVRPETYKEINNFYTTTIYEKGAEL
                     VRMVRTLIGPEKFRAGMDLYFARHDGEAATVEQFIRCFANASGRDLNQFMRWYGQAGT
                     PEVTVHGHFDAARKSYLLECRQVVPATPGQPVKEPMVIPLSLGLLGKDGRDLPLKPST
                     GEPLAAGVMVLTDQAASFELVDVNERPVLSINRGFSAPVKVISNLDADDFAFLAAHDS
                     DPFNRWQALQTISARLLIENVEASRVGRAMRTDDRLMLALANILDDSALEPAFVALAL
                     TPPGEADIARDIGLDVDPDAIFRARSALRAAIGQRLAPQLSALYGRLSNGGGYSPDAR
                     SAGRRALRNVTLDLMA"
BASE COUNT          509 a          789 c          715 g          513 t
ORIGIN      
        1 gtcagcgatg acatgggtcg cgaaaccgcc atcccgcgta taaccggtga acaccggctt
       61 atcgcacagg ttttctcggt tgccgcggca gtacggacag attccgcagg tggctcccaa
      121 ccatggcacc ccgacccggt ctccgatagc aaatccgccg acaccggttc ccagcgccct
      181 cacatgcccg acaatctcat ggccgggcac aattggcagc accggatttg acagttcccc
      241 gtcaacgaca tgcaggtcgg tgcggcaaac gccacacgcc gtcaccatca ccatgatctc
      301 gcccggcgca ggcgtcggta ctggccgctc ggacatgaca agcgccctac gcggccgctg
      361 gagcgccatg gcctgcatgg tcggcatcat tcattcttcc aattgcgagc ctgacacttt
      421 agatcaactg ccatgcgcac cgatattgcc cagccagttc acctgaagga ttaccgccgg
      481 cccgattggc tggtggaaac tgtacggctc gacgtctcat tgcatcctac cgcgtcaagg
      541 atccgtgcga cgctcgcact caagccgaac ccgaacaccg catctgcgcc attgatcctg
      601 gatggtgatg acttgtcgct ggtgtcactt cggcttaatg ggactccgct gccgcccgac
      661 agctatgtgt caagctcgga cagccttacg attccccaac ctccgaatgc gcccttcacg
      721 ctcgaaattg agacgatcgt cgatccatcg gccaataccc agctctcggg cctttatcgc
      781 tcgaacggaa cctattgcac gcaatgcgaa gccgagggct ttcgccgcat tacttatttt
      841 cccgataggc cggacgtcat ggccatttac acgacacgca tcgaggccga caaacgagaa
      901 agccctctcc tgctctcgaa cggtaacctc gttgaaagcg gagagatgcc gggcggacgg
      961 catttcgcgg tctggcacga tccgcatccg aaaccgtcgt acctctttgc gctggtcggt
     1021 ggcgacctgg cctgcgtcga ggaccggttc ctcacaatgt ccggacgcaa cgtgacgctg
     1081 cgaatctata tcgagcatgg caaggaggac cgcaccgcgt acgcgatgga ttcgcttaaa
     1141 cgtgcaatgc gctgggatga agaagtcttc ggtcgcgaat atgatctcga tattttcatg
     1201 atcgttgccg tgtccgattt caatatgggg gcgatggaaa acaagggcct gaatatcttc
     1261 aacgacaaat acgtgctggc cagtccggat acggctaccg acgccgattt tgcgcatatc
     1321 gaagccgtca ttgcgcacga gtacttccac aactggaccg gcaatcggat tacgtgccgt
     1381 gattggttcc agctctgcct gaaggaaggc ttgaccgtct ttcgtgatca ggaattctcg
     1441 gccgacatgc ggtcgcgcgc ggtcaaaagg atcgcggacg ttcgcagtct gcgcgcgaca
     1501 cagttcatcg aggatgcggg gcctctggcg catccggttc gacccgagac atacaaggaa
     1561 atcaataact tctatacgac gacgatctac gaaaaaggtg ccgagctcgt tcggatggtg
     1621 cgcaccttga taggcccgga aaaatttcgc gcgggcatgg atctgtattt cgcgcgccac
     1681 gacggcgagg ccgctactgt cgagcagttc atccgatgct tcgccaacgc aagcggacgg
     1741 gacctcaacc agtttatgcg ctggtatggc caggccggaa ccccggaagt cactgtccat
     1801 ggccatttcg acgcggcgcg caagagttat cttcttgaat gcagacaagt cgtgccggca
     1861 acgccggggc agccggtcaa ggagccaatg gtcattcccc tgtcgcttgg ccttcttggc
     1921 aaagacgggc gtgatctccc gcttaagccg tcgaccggcg agccgctcgc cgcaggagtc
     1981 atggttctga ccgaccaggc ggcgtcgttc gagttggtcg atgtgaacga gcgacccgtg
     2041 ctctcgatca accgggggtt ctcggcgccg gtcaaggtca ttagcaacct tgatgccgat
     2101 gacttcgcat ttctcgccgc tcacgacagc gatccattca atcgctggca agcattgcaa
     2161 acaatctcgg cacgccttct tattgagaac gtggaagcct cacgcgtcgg tcgagcaatg
     2221 cgcactgacg accggctgat gctggcgctc gcaaacattc tcgatgattc cgcgctggag
     2281 cccgcttttg ttgccctggc tttgacgccg cccggcgaag ccgatatcgc ccgagacatc
     2341 ggcctggacg tcgatccgga tgcgatcttc cgtgcccgtt ctgcgctgcg cgccgcgatc
     2401 ggccagcggc ttgcccctca actcagcgcg ctttatggcc gactaagcaa tggcgggggg
     2461 tactcgcccg acgccaggag tgcggggcgc cgcgcgctgc gcaacgtcac tcttgatctt
     2521 atggcg
//
LOCUS       DATDHO010000987         2351 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_246463, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000987 DATDHO010000000
VERSION     DATDHO010000987.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_246463"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..344)
                     /locus_tag="VIY07_19295"
     CDS             complement(<1..344)
                     /locus_tag="VIY07_19295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent phosphohydrolase"
                     /protein_id="HEY6383940.1"
                     /translation="MITIPELASEALGHHLAAHMGRRFGSTDAGLIEFVQSAARLALD
                     CIGNSDALYHNVEHTMMVTLCGYDILKGRRLLKETNADDYAHVLVACLFHDIGYVRGI
                     LDGDSDDGYVIDT"
     gene            complement(521..1453)
                     /gene="mepA"
                     /locus_tag="VIY07_19300"
     CDS             complement(521..1453)
                     /gene="mepA"
                     /locus_tag="VIY07_19300"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HEY6383941.1"
                     /translation="MRPAAGLLAVLVFAAAGTAAAQEKPAIDRMRPGSLNPEPLPPLQ
                     NPNAPSTPAKELFARKSKPLRGPPRSIGYYSAGCLAGAVALPMTGPDWQVMRPSRNRN
                     WGNPQLVRFVERLAKNAKKVGWNGLLVGDMSQPRGGPMISDHTSHQIGLDVDIWFKPM
                     PNHVQSREEREFGASTDLVAADQLDVDPKVWKQKYAEILRTASQDPAVVRILVNAAIK
                     KALCREAGSDRTWLFKVRPWYGHAEHFHVQVACPEDSPDCKPATPPRPSDGCDQELDF
                     WFKESTLNPPPSKPKPPLTLAELPPACKQIVKAP"
     gene            complement(1691..2008)
                     /locus_tag="VIY07_19305"
     CDS             complement(1691..2008)
                     /locus_tag="VIY07_19305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383942.1"
                     /translation="MTIARLVAISAVVCAAAGMTTQAEAAKRRLPPGSFQLEGCAYWM
                     PLCGTVMGSAPNIYVLGPSVPWNTPITVFGRRAGPSLCWGQSTQVAVTGYAPNPKISC
                     QFR"
BASE COUNT          476 a          686 c          678 g          511 t
ORIGIN      
        1 gtgtcgataa cgtagccgtc gtcactatcg ccgtctagaa tgccgcgaac ataaccgatg
       61 tcgtgaaaca gacaggcgac caggacgtgc gcgtaatcgt cggcgtttgt ttcctttaaa
      121 agccttcgtc ccttcaaaat atcgtagccg cagagcgtca ccatcatcgt atgctcgacg
      181 ttgtgataga gcgcgtcact gttgccgata cagtcgagag caagtcttgc agcggactga
      241 acgaattcta tcaaccccgc gtccgttgaa ccaaagcgac gacccatgtg cgccgcaagg
      301 tgatgtccca aagcttccga cgccagttcg ggaatggtaa tcattggacc ctcccggaac
      361 actataagca caatcgttac gcttagtttc gcaatttaca atgtgacgtg ggattttttt
      421 gctggttgtt gtcctcgcgg ttaaatctcc cgctcgcgcc gatcaagtga ttgaatgata
      481 agtccgatgt ccgcttttga cccaaagcgg acatggacaa tcacggcgct ttgacgatct
      541 gtttgcatgc aggaggcagt tccgccagcg tcagcggcgg cttcggtttc gacggcggtg
      601 gattcagcgt cgattccttg aaccagaagt cgagctcctg atcgcagccg tcgcttgggc
      661 gcggcggggt cgccggcttg caatccggac tatcctccgg acaggcgact tgcacatgaa
      721 agtgctcggc gtggccatac cagggacgca ccttgaacag ccaggtgcga tcacttccgg
      781 cctcgcggca cagcgccttt tttatcgcgg cattgaccaa gatgcggaca accgccggat
      841 cctgcgatgc ggtccggagg atctcggcat atttctgctt ccacactttc ggatcgacgt
      901 cgagctgatc agccgcgacc agatcggtgg aggcgccgaa ctcacgttcc tcccggcttt
      961 gcacgtggtt cggcatcggc ttgaaccaga tatcgacgtc gaggccgatt tgatggctgg
     1021 tgtggtcgga gatcatcggt ccgccgcgcg gctgcgacat gtccccgacc aaaagaccgt
     1081 tccagccgac ctttttcgcg ttcttggcga gtcgttcgac gaagcgaacg agttgcggat
     1141 tgccccaatt gcggttgcgc gacggccgca tgacttgcca atcaggtccg gtcatcggca
     1201 acgctacggc gccggcgagg cagccggcgg aatagtagcc gatcgagcgc ggcggtccgc
     1261 gcaacggctt cgatttgcgc gcgaacaatt ctttggccgg cgtcgacggc gcgttcggat
     1321 tttgcagcgg cggcagcggc tcgggattga gcgagccggg gcgcatccgg tcgatcgcag
     1381 gcttttcctg cgcggcggca gtacccgcag cggcgaagac aagtacggcc agcaggccag
     1441 cggcggggcg catctgcaat tatttgctgc tcaaataccg cgtgggtcat ttgaggccgc
     1501 ggttgcgtag ctagcggccc cttctcgttg cgggcatcgt cataccacga gcagtttaac
     1561 gatgacgcgc gtcccgcgaa tttgtttggc ttgtgcgtct ctctaaaaac tccgtgattt
     1621 tttctagaga aacaccgtcg agctggtaca cggcgacata gaaattctaa tttatgcacc
     1681 ggtcaggatt tcagcgaaac tggcagctta ttttgggatt gggcgcatag cccgttactg
     1741 ccacctgcgt gctctgcccc cagcacaaac tggggcccgc cctccggccg aaaaccgtga
     1801 tcggggtatt ccacgggacc gaaggaccca gcacatagat gttgggtgcg gagcccatga
     1861 cggtgccgca cagaggcatc cagtacgcac aaccttcgag ctggaaggag ccgggcggga
     1921 gtctccgctt tgcagcctcg gcttgcgtag tcatgcccgc cgcggcgcag accaccgcgc
     1981 tgatcgcaac tagtcgagcg attgtcatgt tgttccccgt gtttgatgct cacaattaca
     2041 acaggcagga tcgatgttgc gcaaccagaa aattacaccg gagtcgcaat catcttgcag
     2101 ataaccctct ccaacatttg caagtagcaa tctaccgcgc cgctcatccg acgcagtcga
     2161 ggaatattgc cgccagcaac tacgtgacta gcgcatattt ctgatagtgc cgcttgcact
     2221 aaaagctcgc cgtgtgcagt gcacatgtcc gctattggcc caaagcggac atccctagct
     2281 gcaccgctca tgtccgcttt cgggggtaaa gcggacatga cgtttgcgct gcgaaatgtc
     2341 cgcttatgac c
//
LOCUS       DATDHO010000988         3947 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_95216, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000988 DATDHO010000000
VERSION     DATDHO010000988.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 3947)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3947)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3947
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95216"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..636
                     /locus_tag="VIY07_19310"
     CDS             <1..636
                     /locus_tag="VIY07_19310"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6383943.1"
                     /translation="IHLGALMPQLAATLLPVTTFVMVTEPMGEMLHEAVRYRGAVSDT
                     NRADNHYRIVGGDRLQWSGRMRAWEANPRFIARSLANDIRRTFPGLGTVGVAYFWRGT
                     FGRTVHRMPQIGEIERGLWLASGFGSQGLNNTAIAGELVARGIVEGDETWRLFAPYEL
                     VWAGGVIGRMVAQGIYWGTRPVERIEQEAARYREHLRARKQTQPKSQEHYG"
     gene            complement(663..1508)
                     /locus_tag="VIY07_19315"
     CDS             complement(663..1508)
                     /locus_tag="VIY07_19315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEY6383944.1"
                     /translation="MRFEGTKAYVATDDLKVAVNAAITLERPLLVKGEPGTGKTVLAL
                     EIAKATGSPLIEWHIKSTTKALQGLYEYDAVSRLRDSQLGDERVKDIRNYIKRGKLWD
                     AFISDQRPVLLIDEVDKADIEFPNDLLQELDRMEFFVYETGETVKARRRPIVVITSNN
                     EKELPDAFLRRCFFHYIRFPDADTMRAIVEVHFPGIKQRLVSEALRLFYEIRDVPGMK
                     KKPSTSELLDWLKLLMAEDIGPETLRERDPKKLIPPLHGALLKNEQDVHLFERLAFMA
                     RRENR"
     gene            1672..2283
                     /gene="msrA"
                     /locus_tag="VIY07_19320"
     CDS             1672..2283
                     /gene="msrA"
                     /locus_tag="VIY07_19320"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008834568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEY6383945.1"
                     /translation="MFRVLFSLTFMLAVVFAAAGQTAGQSTNQVMATFAGGCFWCTEA
                     DFDKVPGVLSTTSGYIGGHVANPTYGQVSGGGTGHAEAVEIIYDSNKVSFDQLLSYYW
                     RSVDPTVKDRQFCDVGDQYRTAIFVHDDEQRRLAEASKKKIEAELKQPVYTQIVDAGP
                     FYKAEEYHQDFHQKNPIRYNFYRWNCGRDQRLEQLWGTRKGDS"
     gene            2284..2790
                     /gene="msrB"
                     /locus_tag="VIY07_19325"
     CDS             2284..2790
                     /gene="msrB"
                     /locus_tag="VIY07_19325"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEY6383946.1"
                     /translation="MMNRRTMLTAGAALSALAASAGFGKAQTMTATETTDYRKLSDMD
                     WRQRLDASQYMVLRQHGTERPGSSPLNKEKRKGTFVCAGCDLPLFSSETKFESGTGWP
                     SFYQPLPSAVETKTDRSLFMTRTEVHCARCLGHLGHVFDDGPPPTGLRYCMNGVAMKF
                     IPQSPASS"
     gene            3105..3518
                     /gene="dksA"
                     /locus_tag="VIY07_19330"
     CDS             3105..3518
                     /gene="dksA"
                     /locus_tag="VIY07_19330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEY6383947.1"
                     /translation="MLAKTKNYRPSDKEPFMNERQREYFRAKLLAWREDILKEAKETL
                     QHLQEENQNHPDLADRASSETDRAIELRARDRQRKLIAKIDEALGRIEDGTYGYCEET
                     GEPISLRRLEARPIATLSVEAQERHERRERIYRDD"
     gene            complement(3529..3765)
                     /locus_tag="VIY07_19335"
     CDS             complement(3529..3765)
                     /locus_tag="VIY07_19335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383948.1"
                     /translation="MARNYPAWVRSLIDPASFENEQTRLGQIWTLLGVATDVANDGDW
                     FRTVLGGRSIFVQRFGENLRGFENVCAHWPGIEH"
BASE COUNT          877 a         1118 c         1119 g          833 t
ORIGIN      
        1 atccatctcg gcgcgctcat gccgcagcta gcggcgacat tgctccctgt cacgactttc
       61 gtgatggtca ccgagcccat gggcgaaatg ttgcacgagg cggtgcgcta tcgaggggcg
      121 gtaagcgata ccaatcgcgc cgacaatcat tatcgcatcg tcggcggcga tcgcttgcag
      181 tggtcgggac gcatgcgcgc ttgggaggcg aatccacgct tcatcgcccg ctcgcttgct
      241 aatgacatcc ggcgaacgtt tccgggcctc gggactgttg gcgttgcgta tttttggcgc
      301 ggaacattcg gccgcactgt ccatcgcatg ccgcagattg gcgaaatcga gcgcggtctt
      361 tggctggcga gcggtttcgg aagccagggg ctgaataaca ccgccattgc tggcgagctt
      421 gtcgcgcgcg gcatcgtgga gggcgatgaa acatggcggc tcttcgcgcc ctatgaattg
      481 gtctgggccg gcggcgtcat cggccgcatg gtcgcgcaag gtatctactg gggcacccgc
      541 ccggtcgagc gcatcgaaca ggaagccgct cgctaccggg agcatctgcg cgcgcgcaaa
      601 cagacgcaac cgaagtccca ggagcactac ggctgaggaa tttgctgcaa ggtcagactg
      661 gattatcgat tttctctgcg ggccataaac gccagccgct cgaacaggtg tacatcctgt
      721 tcgttcttca acaatgcgcc gtgcagcggc gggatgagct tcttgggatc gcgctcgcgc
      781 aaagtctcgg gcccgatgtc ctcggccatc aacaatttca gccaatccaa aagctcggat
      841 gtcgagggct tttttttcat gcccggcaca tcacgaattt catagaatag ccgtagcgct
      901 tccgagacca gcctctgttt gatcccggga aaatgcactt cgacgattgc cctcatggtg
      961 tcggcgtccg gaaaccggat gtagtgaaaa aagcagcgcc gcaagaaagc gtcgggaagc
     1021 tccttttcgt tattcgaagt gataacgacg atcggtcgcc gccgcgcttt gaccgtttcg
     1081 ccggtttcgt aaacgaagaa ctccatgcga tcgagctcct gcagcaggtc gttaggaaac
     1141 tcgatatcag ccttgtcgac ctcatcgatc agcagcaccg gccgttgatc ggaaatgaat
     1201 gcgtcccata acttgccgcg tttgatgtaa ttacggatgt ccttgacccg ctcgtctccg
     1261 agttggctgt cgcgcagacg ggacaccgcg tcatattcat agagaccctg caaggccttc
     1321 gttgtcgact tgatgtgcca ctcgatgagc ggtgatccgg tcgccttggc aatttccagt
     1381 gccagcacgg tttttccggt gcccggttcc cctttgacca gcagtggacg ctccaaagta
     1441 atcgccgcat tgaccgcgac cttgagatcg tcggtcgcca cgtaggcctt agtcccttca
     1501 aaacgcataa caatgcttcc tgtaccaaat gcccgttatt catataggca gggttcggcg
     1561 tgacaaggtg ctttgatcct aacgggaacg tgatagcggc gcgaccatga gttgatttgt
     1621 cttttgcggt cgattcttta tcccgagccc gtaagacgcg aggaaattcc gatgtttcgc
     1681 gtgctgttca gcctgacctt catgcttgcc gttgtctttg ctgcggctgg gcagaccgcg
     1741 ggccaatcga cgaaccaagt aatggcaacc ttcgcgggcg gttgtttctg gtgcaccgaa
     1801 gccgatttcg acaaagtgcc cggggtgctt tcgacgacct cgggatacat cggtggacat
     1861 gttgccaatc caacctacgg tcaggtctcc ggcggcggca caggacacgc cgaagcggtg
     1921 gaaataatct atgactcgaa caaggtcagc tttgaccagt tattgtccta ctattggcgc
     1981 agcgtcgatc cgaccgtgaa ggaccggcag ttctgcgacg tcggcgatca gtatcgcacc
     2041 gcgatcttcg tccacgacga cgagcagcgc aggctcgctg aggcctccaa gaaaaaaatt
     2101 gaggcagagc taaagcagcc tgtctatacc cagatcgtgg acgctggacc tttttataag
     2161 gcggaggagt atcatcagga tttccatcag aagaacccta tcagatataa cttctatcgg
     2221 tggaactgcg gccgcgatca acgacttgaa cagctgtggg gaacgcgcaa aggagacagc
     2281 tgaatgatga accggcgcac tatgttgacc gctggtgcag cgctgtcagc cctcgcggcc
     2341 agcgctggat ttggcaaggc acaaacgatg acagcgaccg aaacgacaga ctatcgcaag
     2401 ctttccgata tggactggcg ccagcgcctt gatgcaagcc aatacatggt gctgcggcaa
     2461 cacggcaccg aacgtcccgg cagcagtccg ctcaataaag aaaagcgcaa gggtaccttc
     2521 gtctgtgccg gctgcgatct gccgcttttc tcctcggaaa cgaagttcga aagcggcacg
     2581 ggctggccga gcttctatca gcctttgcct agtgcagtgg agactaagac tgaccgatcg
     2641 cttttcatga cgcgtaccga ggtgcactgc gcgcgttgtc tcggccatct tggtcatgtc
     2701 ttcgacgatg gaccgcctcc gaccgggttg cgctattgca tgaacggcgt ggctatgaag
     2761 tttatcccgc agtccccagc ttcctcatga gggctaacca ttcgcgacga tagggatgtt
     2821 ttccgcgcgc cggcataaca gttttgtgac gggcgttgca tggtcgataa gttcctcgtc
     2881 ataggcgatt tgatttgccc cgcgctttaa ccgagccgtt gtgcgatgca aacatgccgg
     2941 cccgatcaac ccgcgcgttc cggtcgagcc ggcggctcca gtgcttccgc gtcagttaga
     3001 gaagcgaatt gatattgtcg gccggtgggc ggatgtatat aagcctgccc acgctagggg
     3061 gctgccccct tcaaaaacag aagaagacca gggagttggt aagaatgctg gccaaaacca
     3121 agaattatcg gccgtcggac aaagagccat ttatgaacga gcgccaacgc gaatattttc
     3181 gagcaaaact gctcgcttgg cgagaagata tactcaagga agccaaagaa acattgcaac
     3241 acctccagga agaaaatcaa aatcaccccg atcttgccga tcgcgcgtcc tcggaaaccg
     3301 accgcgcaat cgaactgcgc gcgcgcgacc gccagcgcaa gctcatcgcc aagatcgatg
     3361 aggcgctggg acgtatcgag gacggcacct acggctattg cgaggaaacc ggcgagccaa
     3421 tctctttgcg tcgcctggaa gcccgcccga tcgcgacact ctcggtcgaa gcgcaggagc
     3481 ggcacgagcg tcgggaacgc atataccgcg acgattgaga cccgccattc aatgctcaat
     3541 gcccggccag tgcgcgcaga cgttttcaaa tccgcgtaag ttctcaccaa accgctgcac
     3601 gaatatggaa cgaccgccaa gaacagttcg aaaccagtcg ccgtcattgg cgacatcggt
     3661 tgctacccca agcagggtcc atatttggcc gagtcgtgtc tgctcatttt caaacgaagc
     3721 gggatcaatg agggagcgaa cccaagccgg gtagtttcta gccatctctc gcgtcacagg
     3781 ctatcgtctt atgaaatgtg atggaaacca agaattggtc tatcgccagt gaccaggaga
     3841 tctcaaaaag ggattgaaat caaaatgcgg ataccgttcg tgctttctgc gcaccctgcc
     3901 aaaacacggg cgctcatctg gaaaacgatc tttagggcga aattcta
//
LOCUS       DATDHO010000989         1706 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_395703, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000989 DATDHO010000000
VERSION     DATDHO010000989.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_395703"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            606..1568
                     /locus_tag="VIY07_19340"
     CDS             606..1568
                     /locus_tag="VIY07_19340"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEY6383949.1"
                     /translation="MSPNIQLPQVVNRVFNDIDEMATAALEWDQEYEQIGCGRFHGEL
                     TQLVLHQIQLNRERWTPGVLQSGPAPKNSWVFALPLKAKGSLHVRRRPVLRGELLAGT
                     SRDDIGFAATGPTDLMIVVLPNSVIRRWMQARRGPNGMDPDLPPRHWAVSAATLMRRS
                     HALSGLLDELLDQSEVKVTPGLLTRVESRISDTILDLIPSAEIVESLHSRARIARSVL
                     QLLHDRYDDPPSVTEMCEQVGARERTLFLSCVEAFGRPPAQLLLELRLNAVHRMLVHP
                     VKGASITGVASHYGFTHFGRFASMYFRRVGELPSATLAKALGSN"
BASE COUNT          322 a          495 c          496 g          393 t
ORIGIN      
        1 acctcggtcg tgatgagcga atagccatag atgtaggcat cttcggcgat ctgctgcgct
       61 tccgatggcg acagcgattg cgcttttgta ggcggcgtga tcgcaaggcc gactgccgcg
      121 accaggcagc tggcgagtga accgcgaatg aaagactgtc tgcttggtgt catcatggct
      181 ggcctccttt cgattggcac tgagcggtgc ccagcgcgct gctacctgcc ttcctttgcg
      241 gtatcagcgg cgcttcgcgc catccgctga taccgatgtt ggctcgagta ttctttcagt
      301 tggccagctc gatctcgctt gcccaggaca acgcagcgac ctgtcgtcga tccattttgc
      361 cactccctgt tacgcgtgct cgcgtgcgag cgctggctac cgttggaaat gatcaggtat
      421 gaaaatcgaa accaaacttt gcggcagttg ccctttggtc caataggcgg agtttgtcat
      481 gtcccgtaat ggctgttgcg gtccaggatt gtctcagcgg tgaagtttcg ccgctatccg
      541 aatcctgcaa ccgggatcgc ccgctcgttc acactggcgc gatcacccct cgtaacgggg
      601 ttgccatgtc gcccaatatt cagttgccgc aagtggtcaa ccgagttttc aacgacatcg
      661 acgagatggc gacggcggcg ttggagtggg atcaagagta cgaacagatc ggttgcggcc
      721 gattccacgg agagttgacg cagctcgttc tgcatcaaat tcagttgaat cgcgagcggt
      781 ggaccccagg tgttctacag agcgggcccg cgccgaaaaa cagctgggtt tttgctctgc
      841 cgctcaaagc gaagggctcg ctgcatgtcc gccggcgtcc ggtcctgcgg ggcgaattgc
      901 tggcaggcac gtcccgtgac gacatcggtt ttgcggcaac cgggcccacc gatctcatga
      961 tcgtcgtact tcccaacagc gtcattcgtc gatggatgca agcgcgccgc ggccccaatg
     1021 gcatggaccc cgatcttcct ccgcgccact gggccgtgtc ggccgcgacg cttatgcgcc
     1081 gctcgcatgc attgtctggc ttgctcgacg aattgctcga ccaatctgaa gtcaaggtga
     1141 cgccgggcct tctcacgcgt gttgaatcga gaatttcgga caccatactt gacttgattc
     1201 cttcggcaga aattgtcgag tcgcttcaca gccgtgcgcg gatcgcgcgg tccgttttgc
     1261 aattgctgca tgaccgctac gatgatccac caagcgtgac agagatgtgc gagcaagttg
     1321 gcgctcgaga gcgaactctt ttcttgagct gcgttgaggc gttcggccgt cctcccgcac
     1381 agttattgtt ggagcttcgg ctaaacgcag tgcatcgaat gcttgttcat cccgtcaaag
     1441 gggcaagcat taccggtgtg gcatcccatt atgggttcac ccatttcgga cgatttgcgt
     1501 caatgtactt tcgacgggtt ggtgaactgc cctcggccac tctcgcgaaa gcgcttgggt
     1561 cgaactaatg cgccgatgtc cgctaagggg ccataggcgg acatgacgat gctcgtccgc
     1621 aagatggaga tcgatggtct agcgcagccg gaacatactc acatccgcgc aaagaccacc
     1681 acgggattcc cttttccatc gatcag
//
LOCUS       DATDHO010000990         2010 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_490876, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000990 DATDHO010000000
VERSION     DATDHO010000990.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2010)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2010)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2010
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_490876"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..473
                     /locus_tag="VIY07_19345"
     CDS             <1..473
                     /locus_tag="VIY07_19345"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383950.1"
                     /translation="FYLEYPWYRIMIAGLSAAIIGGFWLFLKHGKYGIWIRATTQDRV
                     MAQAMGIPVPLVHTAAFALGAGMAAASGVLFGPLVGVNHTMGLDWVLKAFIVVVVGGM
                     GNLGGSIAAAIFISLLEAYASIWVSPAQAVIVSFIVLILTLLFRPTGLFVPTPK"
     gene            470..1474
                     /locus_tag="VIY07_19350"
     CDS             470..1474
                     /locus_tag="VIY07_19350"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383951.1"
                     /translation="MTTAPLDKTMPLKRRALLSHPMAFWLGFAVVMALLIVAPLVLPE
                     FWRRFLTEVLIWGLLAMSSDLLIGYTGMVSFGHSAFFGLGMYGAAAALLMFSPPSLWL
                     ALAFGLVASAVIALFVAYFSTRLRDIYFAITTLIFSQIFYVIIFTWTEVTGGENGLNF
                     RRPPLAIPGLFSVPFNSETMHWFVLAVVTASYLILRRITQSPFGMVLQSIRENEPRTR
                     AIGYPVERYKIVAVMLSGLFAGLAGVLYAIQNRFAAPDFIFFLVSGEAVIFNVMGGIG
                     TLVGPIVGAGFFLVMRELLSRVFGDQFPYLIPLGVVFIVMIIFLPQGLLGFARRWLNR
                     "
     gene            1486..>2010
                     /locus_tag="VIY07_19355"
     CDS             1486..>2010
                     /locus_tag="VIY07_19355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEY6383952.1"
                     /translation="MALRRLGIVMYGITGRMGLNQHLERSIVAIRAQGGVALPNGDRV
                     MPDPILVGRNAEKVAALARRYGIERSTTDLDAALKNQDDTVFFDAATTQMRADLLTRA
                     IEAGKHVYCEKPVADALDKAIAVAKLAKAKKVKNGVVQDKLFLPGLRKIRMLRDSGFF
                     GRMFAVRGEFGYWVF"
BASE COUNT          335 a          597 c          583 g          495 t
ORIGIN      
        1 tgttctatct ggaatatccc tggtatcgca tcatgatcgc gggcctctcc gccgcgatca
       61 ttggcggttt ctggctgttt ctcaaacacg gcaaatacgg aatttggatt cgcgccacga
      121 cccaggatcg cgtgatggcg caagcgatgg gcattcccgt gccgctggtg catacggccg
      181 ccttcgccct cggcgccgga atggccgcgg cgagcggggt gttgttcggc cccctcgttg
      241 gcgtcaatca caccatgggc ctcgactggg tcctcaaggc atttatcgtt gtcgtcgttg
      301 gcggcatggg caatctcggc ggctcgatcg cggcggctat cttcatcagc ctccttgaag
      361 cttatgcctc gatctgggtg agcccggcgc aggcggtcat cgtctccttc atcgtgctga
      421 tccttacgct tctgttccgg cccaccggct tatttgtccc gacaccaaaa tgaccaccgc
      481 gccgctcgac aaaacgatgc ctctcaagag acgcgccctc ttgagccacc ccatggcgtt
      541 ctggctcggc tttgccgtcg tgatggcgct gctcatagtg gcgccactgg tgttgccgga
      601 gttctggcga cggttcctga cggaggtcct gatctgggga ctgctcgcga tgtcatccga
      661 tctgttgatc gggtacacgg gaatggtctc gttcggccac tcagcatttt ttggtctcgg
      721 catgtacggt gccgcggcgg ctctgctcat gttctcccca cccagcctgt ggcttgcgct
      781 ggcctttggc ctcgttgcat ccgccgtaat cgcgctgttc gtcgcctatt tctcgacgcg
      841 ccttcgcgac atttatttcg cgatcacaac actgatcttc agccagattt tctatgtgat
      901 tattttcacc tggacagaag ttaccggcgg cgagaacggg ctgaacttcc gtcgcccacc
      961 actggcgatt cccggcctgt tctccgttcc attcaattca gagaccatgc actggttcgt
     1021 tcttgccgtg gtgaccgcgt cctatttgat cctgcgacgc attacacaat cgcctttcgg
     1081 catggtgctg caatcgatcc gcgaaaacga gccgcgcacc cgggccatcg gctacccggt
     1141 cgagcgctac aagatcgtcg ccgtcatgct gtcgggactt tttgcgggat tggcgggcgt
     1201 cctttatgcc atacagaacc gcttcgccgc gcccgacttc attttcttcc tggtttcagg
     1261 tgaggcggtg atttttaacg tgatgggagg cataggcacg cttgtggggc ccatcgtcgg
     1321 tgccggattt ttcctggtca tgcgcgaatt gctgtcgcgc gttttcggtg atcaatttcc
     1381 ctacttgatt cctctcggcg tcgttttcat tgtgatgatc attttcctgc cgcagggcct
     1441 gctcgggttc gcgcggcggt ggcttaaccg ctaatcgagg caagtatggc attacgcagg
     1501 ctcggcatcg tgatgtatgg catcacgggc cgcatgggac tcaatcagca tctcgagcgt
     1561 tcaatcgtgg cgatccgggc tcaaggcggc gtcgcgttgc caaacggcga ccgcgtgatg
     1621 cccgatccga ttttggtcgg ccgcaatgcc gaaaaagttg cggcgctggc gcgacgctac
     1681 ggaatcgaac gctccacgac cgacctcgac gcggcgttga aaaatcagga tgacacggtg
     1741 ttcttcgatg cggcaacaac ccagatgcgc gccgatctgc tcacccgcgc aatcgaagcc
     1801 ggcaagcatg tctattgcga gaagccggta gccgacgctc tcgacaaggc gattgcggta
     1861 gcaaagctcg ccaaagcgaa gaaagtcaaa aatggtgttg tgcaggacaa gttatttctg
     1921 cccggcctgc gtaagatcag gatgttgcgt gattccggct tcttcgggcg gatgttcgcg
     1981 gttcgcggag aattcggcta ctgggtgttc
//
LOCUS       DATDHO010000991         1706 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_48783, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000991 DATDHO010000000
VERSION     DATDHO010000991.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1706
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48783"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            506..865
                     /locus_tag="VIY07_19360"
     CDS             506..865
                     /locus_tag="VIY07_19360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013532858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEY6383953.1"
                     /translation="MNTQELAKAFTDMCAKGELEAAGKKFWSDDIVSREPMTGDMAEL
                     KGRKAVEGKTQWWNANHEVHDLKVEGPYVHGDQFVVRFKLDVTPKGQKRIHLDEVGLY
                     TVRNGRIVEESFFMGGR"
     gene            1142..>1706
                     /locus_tag="VIY07_19365"
     CDS             1142..>1706
                     /locus_tag="VIY07_19365"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003551120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEY6383954.1"
                     /translation="MKAIVVTDQAAGTAGMKLVERPEPPAAINDVIVQIHASGFVPTE
                     LAWPSTWTDRRDRDRTPSIPGHELAGVVTALGYGTTGLSVGQRVFGLADWHRDGTLAE
                     YVAIEARNLAPLPGDVDFTVGASLPISGLTAWQGLFQHGRLQAGQSVLVHGAAGAVGS
                     IVTQLAREAGGYVIGTGRAADHQKALDF"
BASE COUNT          380 a          494 c          532 g          300 t
ORIGIN      
        1 cagagcgggc gccgtccaca gcatcaaaag cggacatacg cgccgcaaaa agccgtgtcc
       61 gctttaccct cgaaagcgga cacacccatg tccgctttgg gccagaagca gacatgtgca
      121 gcgcacggct cgtgtccgcc aagggccaaa ggcggaagtc atttcaaggt ctgttgggcc
      181 ggcaaattgg tcattggcat cacattaccg ggtttttgat catcgcggcg gtcggcgcgg
      241 cctccggctt gatccagata tcatcggcga ggccaagccg accgctgcgc gctcagcggc
      301 ggaacggtat gtgtaggcga ccagcaatcc ggtctgctgt aaaccatttg tgatggaacg
      361 aagcgaaagc aatttcttat tccgggcata cgtcttcgcc aatgcgtcgg ccgcgtcgga
      421 ggccattatc ggccgtcgcc ttgggaacct cgctatggga tcggtaataa tatcgggggc
      481 ggggcgcaga aaaggatttg acgtcatgaa tacgcaagag ctggcaaaag ctttcaccga
      541 catgtgcgcc aagggcgaac tagaggccgc cggtaagaaa ttctggtccg acgacatcgt
      601 gagccgtgag ccgatgactg gcgatatggc agaactcaag ggtcgcaagg ctgtggaagg
      661 aaaaacccaa tggtggaacg cgaaccacga agttcatgat cttaaggtcg agggtcctta
      721 tgtgcacggg gatcaattcg tcgttcgctt caagttggat gtcacgccaa agggccagaa
      781 acgcatccac ctcgatgagg tcgggcttta cacggtccgg aacggtagga tcgtcgagga
      841 aagctttttc atgggtggca ggtaatccca atcggatcgc cgcttccggc tcagcgtgtt
      901 cgaaaccctc acgcggctgt cgtcctagca ttctaagtta gatgtgctgt gtccaccaat
      961 gcgtgacaca gcaacgatcg tgcgaggcga aagtggacag agtccccaat cccatcaacg
     1021 atcaaacctc gaatgcggcg tgcaagcaga aacgaacaaa caatccttcg tgaccgcaca
     1081 aatgaaatcg tcaacgaacg ctaccggttc accaacaaag agaaccgagg agacaattca
     1141 catgaaggca atcgttgtga cggaccaggc tgcgggaacg gccgggatga agctggtgga
     1201 gcggcccgag ccgccggcag cgataaacga cgtcatcgtt cagattcatg catcgggatt
     1261 cgtcccgact gagctggcgt ggccctcgac ctggaccgat cgccgcgacc gtgaccgaac
     1321 accgtcgatc cccggccacg agctggccgg agtggtcacc gctctcggct acggcacgac
     1381 ggggctgtcg gtaggacagc gagtgttcgg cctcgccgac tggcatcgcg acggcaccct
     1441 ggcggagtat gtagccatcg aggcacgcaa cctcgcgccg ctgccgggcg acgtcgactt
     1501 cacggtgggc gcgagcctgc cgatctcggg cctcaccgcg tggcagggac tgttccagca
     1561 cggccgcctt caggcggggc agagcgtcct cgtgcacggc gcggccggcg cagtcggttc
     1621 gatagtgacg cagctcgcac gtgaggccgg cggctacgtc atcggcactg gacgcgcggc
     1681 cgaccatcag aaagcgctcg acttcg
//
LOCUS       DATDHO010000992        11706 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_95652, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000992 DATDHO010000000
VERSION     DATDHO010000992.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 11706)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11706)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11706
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95652"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VIY07_19370"
     CDS             complement(<1..346)
                     /locus_tag="VIY07_19370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-coenzyme A synthetase N-terminal
                     domain-containing protein"
                     /protein_id="HEY6383955.1"
                     /translation="MSDKVYDVPAEWRKRAYIDEAKYKELYARSVKDPNGFWAEQAKR
                     IDWIKPFSKVKNTSYDPNNVSIKWFEDGTLNVCYNCVDRHLAKRGDQTAILWEGDDPK
                     EDKKLTYKQLHAD"
     gene            complement(471..899)
                     /locus_tag="VIY07_19375"
     CDS             complement(471..899)
                     /locus_tag="VIY07_19375"
                     /inference="COORDINATES: protein motif:HMM:NF020157.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1761 domain-containing protein"
                     /protein_id="HEY6383956.1"
                     /translation="MNLAHANLVSILVAAVAAWIFGGIYYTALSKPWIAAQGKTLEQF
                     KAEQDAKSALAKGAPFVVVFISEIIVGWALYGILLHMNAFSVRAGIISAALCWFGFVL
                     TTIATNNAFSGRRPMLTMIDSVGWLGAFLIIGAIVGGFGP"
     gene            complement(910..1329)
                     /locus_tag="VIY07_19380"
     CDS             complement(910..1329)
                     /locus_tag="VIY07_19380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EVE domain-containing protein"
                     /protein_id="HEY6383957.1"
                     /translation="MAYWLLKTEPEEYSWDDQVKRGAKGEAWTGVRNFTARRYLKEMK
                     KGDMFFFYHTGDEKQVIGIGEIIREAFPDPTAGKNEPWVAVTTVADKPLPKTVTLAAI
                     KAEPKLKEMALVKYGRLSVQPVTEAEWKLVCKMGGLK"
     gene            complement(1334..2317)
                     /locus_tag="VIY07_19385"
     CDS             complement(1334..2317)
                     /locus_tag="VIY07_19385"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008144714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEY6383958.1"
                     /translation="MSIQRISVLGGGAWGTALALTCARAGRQVMLWEYEERNAEALEK
                     NRESRFLPGIRVDDGIKVTRDLEETASGDAILIVVPAQAVRSVVSCLASSIEKDMPLI
                     VCAKGIEHGTHKFMTEIIAECAPNALPAILSGPSFAVDVARGLPTAVTIAATDAKVAL
                     NLAHALNAGTFRPYHSTDVRGVELGGATKNVLAIAAGIVTGKGLGASASAALTTRGFA
                     ELVRFGKAYGAKTETLMGLSGLGDLVLTCGTPQSRNFSCGVALGKGEDPRTAAHGKLA
                     EGVFTAPVLLEMAREKDVDMPIASAVAAVLSKSMSVDAAIESLLTRPLRSE"
     gene            complement(2334..3407)
                     /gene="tsaD"
                     /locus_tag="VIY07_19390"
     CDS             complement(2334..3407)
                     /gene="tsaD"
                     /locus_tag="VIY07_19390"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEY6383959.1"
                     /translation="MIVLGIETTCDETAAAVVERFDDGRGRILSNVVLSQSAEHAAFG
                     GVVPEIAARAHVEVLDAIIANAMTQAGRDYDAIDGVAAAAGPGLIGGVIVGLTTAKAI
                     ALVKNKPLLAVNHLEAHALTARLTDRVAFPYCLFLASGGHTQIVAVRGVGNYVRLGTT
                     QDDAIGEAFDKTAKLLGLGYPGGPQVEKEAARGNAMRFTLPRPMHGRKDADFSLSGLK
                     TALRLEAEKIAPLSDQDVADLCGSFQQAIVDVVFDRLRAGLVLFRARFGTPTALVAAG
                     GVVANQAVRKVLNRLAFEVGTTLVLPPPELCTDNGAMIAWTGCERLALGLTDPLNIAP
                     RARWPLDEIAAAEGLRRRTAAYK"
     gene            3512..4438
                     /gene="hemC"
                     /locus_tag="VIY07_19395"
     CDS             3512..4438
                     /gene="hemC"
                     /locus_tag="VIY07_19395"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019861972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEY6383960.1"
                     /translation="MAQSTVSLRIGTRGSPLALVQARAVRACLAAAMHMAEEEIELVV
                     IRTSGDTIQDRPLAEEGGKGLFTKEIEEALLAGRVDLAVHSAKDMSTVLPEGLMLAAC
                     LEREDPRDVFISRKARTLSELPKGARLGTASLRRQAIAKRARPDLIVTPLRGNVETRL
                     RKLDAGEADATLLALAGLKRLGLAGQATRIMSAEEFLPAVGQGAIAIETRANDARMRD
                     IVAHIDDADTSTAIACERAFLAALDGSCKTPIAGHATVVASTVQFRGLIARPDGSAAL
                     DIAGTGDRKDAATIGTEAGRELKHRAGPGYFD"
     gene            4457..5164
                     /locus_tag="VIY07_19400"
     CDS             4457..5164
                     /locus_tag="VIY07_19400"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: protein motif:HMM:NF014641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEY6383961.1"
                     /translation="MRIVVTRPRVDGERTATALRAFGHEVLVTPLMRVEAVTANLGGE
                     WSGVIVTSANVAHVIRDNSSCNVLMKLPLFAVGRRSAEAARESGFKDVLSADGGVRDL
                     LQLIGTRRPDRNTRLLYLAGEDRAADLVGELSARGIAAEMRVVYRAVALPFPPALKDA
                     LKADIVDAVMHFSRRAADSYVAGAKMAGVAAPALAVRHLCLSSQVAEPLADASRVDIA
                     SRPDEAALIELLQAPTA"
     gene            5237..6460
                     /locus_tag="VIY07_19405"
     CDS             5237..6460
                     /locus_tag="VIY07_19405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383962.1"
                     /translation="MPDKRTTSDPAEGAPRRKRRAPTIDLTATEVPEATTARAHPEPS
                     GPPGPEQVKPADESETRSESKPESIGHANSSSGRASWLSGPALAGGITGATVAVIAFL
                     ALWLAGAAPVRHAVSTEPSAQLDVLAQRIAKVEAALAKIPANDPSVSERLSAADNAMK
                     SLGIALTALNKHNEEAAAGAADARARADAAEKSVAQLRGSLQDLTRNTSAGVSPVDVD
                     ALQKRIAALEQTTKSAPVDVGARLAQTVTALRDAVVSGVPFVAELDAARSLGVDENTL
                     KLLTPFAANGVPTAAALGQELSALIPAMSKAAGSQGPGGSLLERIEANASKLVRIRPV
                     GAPAGTDPSAVLARIEVEAAHADIDGALTDLARLDAAIRSPAQTWIDKARARQAALTA
                     ARQLVGDATRALGKR"
     gene            6468..8018
                     /locus_tag="VIY07_19410"
     CDS             6468..8018
                     /locus_tag="VIY07_19410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis HemY N-terminal
                     domain-containing protein"
                     /protein_id="HEY6383963.1"
                     /translation="MIRIVLFLASVTVIAAGFAWIADRPGEVAITWLGYRVETSVMVA
                     AFAIAVLVLIVTLLWSIMRSILRSPEQVSLFFRHRRAVKGYLAVSRGLIAIGAGDLQL
                     ARKSADEAARLSPGDPLALLLTAQSAQMAGDRTTAERAFREMTRRDETKLLGLRGLYI
                     EAQRRNDGAAARHAAEEAAKISPAVAWAGQAVLDYRCATGDWAGALEALDHMKPSLEK
                     PDYRRKRAVLLVARAQALEDMDRDTSQKLVLESVKLAPDLVPAAALAGRRLAESGEPR
                     KARKILEAAWTINPHPDIAESYANLRLGDSARERLARMQKLASKVPGQLEGALAVARA
                     ALDARDFATGRGALAPYLSAPTRRVATLMAEIEESEHGDEGRVREWMARAMRASGDPV
                     WTADGVVSERWLPVSPNGRLDGFEWKVPLAEIGVTRPVIEVTTPPADTMPEPPPTASE
                     NKPADRPRKRLKSSMFSKTTPVQPVIPLVHAPDDPGLESGLDRDPVPETSGPPANDAW
                     QRLRQLFR"
     gene            8091..8162
                     /locus_tag="VIY07_19415"
     tRNA            8091..8162
                     /locus_tag="VIY07_19415"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8123..8125,aa:Thr,seq:cgt)
     gene            8364..9122
                     /locus_tag="VIY07_19420"
     CDS             8364..9122
                     /locus_tag="VIY07_19420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383964.1"
                     /translation="MAKPTVILVGADKGGVGKTTVARTLIDYFGAHQTPTRAFDTEWP
                     RGTLKRFHPDLTEVVDVTSVPDQMKIFDTLGSAEAKVTVIDVRAGLLSATLQALTDIG
                     FLESAKKGQITFAVFHILGSSIASLDEIAETARVVGDANYFLVKNFINNTTFFEWDPA
                     VYNSYFKKIKGAEEIIIPKLNEMAFEQVEVASVPFVSFVGNKSAKGEAANYSFVLRGY
                     VRHWLGNVWGEFDRVKLVDMVSPKIESNVRQVAG"
     gene            9164..9895
                     /locus_tag="VIY07_19425"
     CDS             9164..9895
                     /locus_tag="VIY07_19425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383965.1"
                     /translation="MSFRSSITIVASPRPRVGKTLLARLLTDFHSHEGRLVTAFDLNT
                     GDRTLAQFLPEKTATASIRDVNGQMALFDHLVAYEDITKIIDVGHEAYEGFFSLAHNI
                     GFVDEARRRSIAVAILFMVTPDHTSVTAYRSLRERFTHATLAPVHNEMLGPAQHRDKY
                     PLASGGPGVVRMAVLAPGLRRYIETPPFSFADPRIADPARIPDTAYAELERWLRRIYL
                     EFRELDLRILLADLRSSIQFSSHSQ"
     gene            10173..11435
                     /locus_tag="VIY07_19430"
     CDS             10173..11435
                     /locus_tag="VIY07_19430"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383966.1"
                     /translation="MPAPLLLSRKFAPLFWCQFFAAFNDNFLKTALVFVILFQSGISN
                     PEALITSAGAVFIAPFFFLSGLGGQLADRYDKARVAQRLKFVEIFVAAIAAWGYARTS
                     LPLLFGALFGFGILAALFGPTKYGILPDHLWREQLPAGNALVEGATFVAILLGTIGGG
                     LAATHGGNANAFVVLIMVFAVASWLSALLIPPTGEGAPKLAIQINIANSTLAMLRHLR
                     ADSRLWWGAMVVSWFWLVGIVVLSLLPPLIKMLGGNENSVTAYLAVFTIAVGLGSALA
                     AAIARGRIILTTTLAGALLLGIFALDIGIAAFETAPATGSQGPVSVFASTSGGRVAAG
                     LCGLAIAGGLFIVPTFAAVQAWSGADQRARTIAAVNILNAAFMTAATIVVAVMQKLGA
                     TVPLLFMMIGVATLCVALAIWRTMPKDD"
     gene            complement(11440..>11706)
                     /locus_tag="VIY07_19435"
     CDS             complement(11440..>11706)
                     /locus_tag="VIY07_19435"
                     /EC_number="5.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:NF021883.4"
                     /note="Catalyzes the cycloisomerization of
                     cis,cis-muconate; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HEY6383967.1"
                     /translation="LDITKGLIMSEAVMMGLGAELGRNKAHDLVYDICRDVVKTGRPL
                     IDLLAENKEIGKYADRKKLEKLVDPANYLGVAGKMVDRVLKMRK"
BASE COUNT         2189 a         3552 c         3565 g         2400 t
ORIGIN      
        1 cgtctgcgtg caactgctta tacgtgagct tcttgtcctc cttcgggtca tcgccttccc
       61 aaaggatcgc ggtctgatcg ccccgcttgg caagatggcg gtcaacgcag ttgtagcaga
      121 cgttcagcgt gccatcttcg aaccatttga tggacacgtt gttggggtcg taggacgtgt
      181 tcttgacctt gctgaagggc ttgatccagt cgatgcgctt ggcctgctcg gcccagaacc
      241 cgttcggatc cttgacagat cgcgcataca actccttgta tttggcttca tcgatatagg
      301 cgcgtttgcg ccattcggcc ggcacgtcat agaccttgtc ggacatcgac actcctcccg
      361 acccgccctg ttacgcggca ggcacttatt cgtttatcgg tcgcattatg cgacggcatt
      421 tgcgcgaccg acaaggtgcg gataaccccc ggttccggga gattcaggct tcagggccca
      481 aagccgccga caatagcgcc gataatcaga aaagcgccga gccagccgac gctatcaatc
      541 atcgtgagca tcgggcggcg gccactgaag gcattgtttg tcgcgatcgt tgtcagcaca
      601 aagccgaacc agcatagggc ggccgagatg atgccggcgc gcacgctgaa cgcattcatg
      661 tgcaaaagga tgccatagag cgcccagcca acgatgatct cgctgatgaa aaccacgacg
      721 aaaggtgctc ccttcgccaa cgccgacttg gcgtcttgct ccgccttgaa ttgctccagg
      781 gttttgccct gcgccgcgat ccagggcttg ctcagggcgg tgtaataaat accgccgaaa
      841 atccaggcgg ccacggcggc aacgaggatt gaaacaagat tggcatgcgc aagattcatt
      901 gccgcctccc tatttcagcc cgcccatttt gcacaccagc ttccactccg cctcggtcac
      961 cggctgcacc gaaaggcgcc cgtatttgac caaggccatt tctttaagtt tcggctcggc
     1021 cttgatggcc gcgagcgtta cggtcttggg caacggcttg tcggccacag tcgtgaccgc
     1081 tacccacggc tcgtttttcc ctgccgttgg gtctgggaag gcctcgcgaa tgatctcgcc
     1141 gatcccgatg acctgtttct cgtcgcctgt gtgatagaaa aagaacatgt cgcccttttt
     1201 catttccttg agataccggc gcgccgtgaa attgcgcaca ccggtccagg cctcaccctt
     1261 tgcgccacgc ttgacctggt catcccacga atattcctcc ggctccgtct tcagcaacca
     1321 atatgccatg gcttcattcc gatctgagcg gccgtgtaag caacgattcg atcgctgcat
     1381 ccacgctcat gcttttcgat agcaccgcag cgacggcact ggcgatcggc atatccacgt
     1441 ctttctcgcg cgccatctcc agaagcaccg gcgcggtgaa aacgccttcc gccagtttgc
     1501 cgtgcgcagc ggtacgcggg tcctcgcctt tccccagggc cacgccgcag gaaaagttgc
     1561 gcgactgcgg agtcccgcag gtgaggacta gatcgccaag accggacagg cccatcaagg
     1621 tttcggtctt ggccccgtat gctttgccga aacggaccag ctcggcgaaa ccgcgcgtgg
     1681 tgagcgctgc cgaggcgctg gcacccaatc cctttcccgt gacgatgcct gcggcaatag
     1741 cgagaacatt cttggttgca ccgcccagct cgacaccgcg aacatcagtc gagtggtagg
     1801 ggcgaaaagt gccggcgttc agcgcatgtg ccaggttgag cgcgaccttg gcatccgttg
     1861 ctgcgatggt gaccgccgtg ggcaatccgc gcgcgacatc gaccgcgaag ctgggtccgg
     1921 agaggattgc gggcagtgcg ttcggcgcgc attcggcaat gatctcggtc atgaatttat
     1981 gtgtgccgtg ctcgatgcct ttggcgcaga cgatgagcgg catgtccttt tcgatcgaag
     2041 atgccagaca ggagaccacc gaccgtaccg cctgtgccgg aaccacgatg agaatcgcat
     2101 cgccgctcgc ggtttcttca agatcgcgcg ttaccttgat gccgtcgtcg acgcgtatgc
     2161 cgggcagaaa gcggctttcc cgattttttt ccagtgcttc ggcgttccgt tcctcgtatt
     2221 cccaaagcat gacctgccgt ccggcacgcg cacacgtgag cgcaagcgcc gttccccagg
     2281 cgccgccacc aagcaccgag atcctttgaa tgctcatgtc gttcgctggt ccactacttg
     2341 tatgcggctg tgcgccgccg caggccttcg gcggcggcga tctcgtcaag cggccagcga
     2401 gcacgcggcg ctatattgag cggatcggtg aggccgagcg cgaggcgttc gcagccggtc
     2461 cacgcgatca tcgcaccgtt gtcggtgcac agttcgggtg gaggtagaac gagagtggtg
     2521 ccgacctcaa aggcgagtcg attgagcacc tttctcaccg cctggttcgc aacaacgcct
     2581 cccgctgcaa cgagcgcggt gggcgttcca aaccgcgcgc ggaaaagcac cagcccggca
     2641 cgcagccggt caaataccac atcgacgatg gcttgctgaa aagacccaca aaggtcggcc
     2701 acgtcctggt cgctaagcgg cgcaatcttc tccgcttcca gccgcagcgc ggtcttcaaa
     2761 cccgacagcg aaaaatcggc atccttccgt ccgtgcatcg gccgcggcag cgtgaagcgc
     2821 atcgcgttgc cgcgcgcggc ttccttctcg acctgaggcc cgcctggata tccgaggccg
     2881 aggagttttg cggtcttgtc gaaggcctcg cctatcgcgt cgtcctgtgt ggtgcccagg
     2941 cgcacgtagt tgccaacgcc gcgaacagcc acgatctggg tatgaccgcc agacgccaga
     3001 aacaggcagt agggaaacgc gactctatca gtcaggcggg cggtgagggc gtgagcttcc
     3061 agatgattga ccgcgagcaa cggtttattc tttacgagcg caatcgcctt cgcggtggtc
     3121 aggccaacta tgacgccgcc gatcagtcca gggccggcag cggcggcaac gccgtcaatt
     3181 gcatcgtaat cccgaccggc ctgcgtcatg gcattggcga tgattgcatc gagaacttct
     3241 acatgcgcgc gcgcggcgat ttccggcacg acgccgccga acgcggcgtg ctcggcgctt
     3301 tgcgacaaca ccacgttgga aaggatcctg ccccgcccgt cgtcaaagcg ttcaaccacc
     3361 gcggcggcgg tttcgtcgca cgtcgtctcg atgccgagga caatcatcag ttcctcaatg
     3421 gcttgcgccc gaccggggtg acggcggctg aaataatagc tagtcctgac gcttgggccg
     3481 accccggtcc ggcctagcat cgcgaggtta catggcgcaa tccacagtct cgttgcgcat
     3541 aggcacgcgc ggcagcccgt tggccttggt gcaggcgcgc gcggtgcgcg cgtgtctggc
     3601 tgcggccatg cacatggccg aggaggaaat cgaactcgtc gtcattcgca ccagcggcga
     3661 taccatccag gatcggccac tggcggaaga aggcggcaaa ggcctgttta ccaaggaaat
     3721 cgaggaagcg cttcttgccg ggcgcgtcga tctcgcggtc cactcggcaa aggacatgtc
     3781 caccgtgctg cccgagggac tgatgctggc ggcatgtctc gaacgcgagg atccccgcga
     3841 cgttttcatc agccgcaagg cgcgcacgct ttcggaattg cctaaagggg ccaggctcgg
     3901 aactgcatca cttcgccgtc aggccatagc gaagcgtgcg cggccagatc tgatcgtgac
     3961 gcccctgcgc ggcaacgtgg aaactcgcct tcgcaagctc gacgccggcg aagccgatgc
     4021 gaccctgctc gcgctcgcag gattgaaacg gctcgggctg gcgggtcaag ccaccaggat
     4081 catgagtgcc gaagaatttc tgccggccgt cggacaaggc gcgatcgcga tcgagacgcg
     4141 tgcaaacgat gcgcggatgc gcgacatcgt ggcgcatatt gacgatgccg acacgtcgac
     4201 agccattgca tgcgaacgcg cttttctcgc cgctctcgat ggttcatgca aaactccgat
     4261 cgcaggtcac gcaaccgtgg tggcaagcac ggtgcaattc cgcggactga tcgcgcgacc
     4321 ggacgggagc gctgcgctcg acatcgcagg gactggcgac cgcaaggacg cggctacgat
     4381 cgggaccgaa gccggacgcg agctcaagca tcgtgccggg ccaggatatt tcgattgatg
     4441 gacaagggcg ggtgacatgc gcattgtcgt cacgcgtcca cgagttgacg gcgagcggac
     4501 cgctaccgcg ctccgggcat tcggacatga ggtgctggtg acaccgctca tgcgcgtcga
     4561 ggcagtgacg gcgaaccttg gcggcgagtg gagtggagtc atagtcacca gcgcaaatgt
     4621 agcacacgtc ataagggata attcctcttg caatgttctc atgaagctgc cgctgtttgc
     4681 ggtcggccgg cgcagtgcgg aagctgcacg cgaaagcgga ttcaaagacg tcttgtcggc
     4741 agatggcggg gtacgtgatc ttctacaact catcgggacc cgtcggcccg atcgaaatac
     4801 gcggctgttg tatcttgccg gtgaggatcg tgcagccgat ctcgtcgggg aattgtcggc
     4861 gcgcggaatt gctgccgaaa tgcgtgtcgt ctatcgcgcg gtcgctttgc cgtttccacc
     4921 ggctctcaag gatgcgctca aggctgatat agtcgacgcg gtgatgcact tctcccgccg
     4981 agccgccgac agctacgtgg ctggtgcaaa gatggccggc gtcgcagccc cggcgcttgc
     5041 ggtgcgccat ctttgtctgt cgtcgcaagt ggccgagccc ctcgccgatg ccagccgcgt
     5101 tgatatcgcc agtcgccccg atgaagccgc attgattgaa cttttgcagg cgccaaccgc
     5161 ttgattattg gcgcacgccc gacatttgcg ttatttcctg cctgcggggt tgaggcgatt
     5221 cgcggaggaa gcgcgcatgc ccgataagcg cacaacatct gaccctgcgg aaggggcgcc
     5281 ccgccgaaag cgccgggcgc cgaccatcga tttgaccgca acagaggtcc cagaagcgac
     5341 gactgctcgc gctcaccccg aaccgtccgg accgcccggg ccggaacagg tcaagcccgc
     5401 ggatgagtcg gagacgcgat ccgaatcaaa gccggaatcc atcgggcatg cgaattcgtc
     5461 gtccggccgg gcctcgtggc tcagcgggcc ggcgcttgcc ggcggtataa ctggcgcaac
     5521 ggttgctgtt attgctttcc ttgccctctg gctggccggt gcagcgccgg tccgtcacgc
     5581 ggtatcaacc gagccaagcg cgcagctcga tgtgcttgcg caacggatag caaaggtcga
     5641 ggcggcgctt gcaaaaattc cggcgaacga cccgagtgtt tcagagcggc tttctgcagc
     5701 cgacaacgca atgaaatcgc tcggcattgc gttgaccgcc ctcaacaagc acaacgagga
     5761 ggccgctgcc ggtgctgccg atgcacgcgc gcgggcggac gcggccgaaa agtcggtcgc
     5821 acagttgcgg ggcagtttgc aggatctcac caggaatacc tctgccggcg tgtctcctgt
     5881 tgatgtcgac gcccttcaaa agcggattgc ggcgcttgag cagacgacca agtcggcacc
     5941 cgttgacgtt ggcgcaaggc ttgcacagac cgtaacggcg cttcgcgacg cggtcgtgag
     6001 cggtgttccc ttcgtcgccg aattggacgc agcaaggtct ctcggcgtag acgaaaatac
     6061 attgaagttg ctgacgccat ttgcagcgaa cggcgtgcca accgcagcag cgctagggca
     6121 agaattgagt gccctgattc cagcaatgtc caaggcagcg ggctcgcagg ggccgggcgg
     6181 aagtttgctg gagcggatcg aggccaatgc cagcaagctg gtgcgcatcc gcccggtcgg
     6241 tgcgccggcc ggcaccgacc cgtcggcggt gctcgcacga atcgaggtcg aagccgcgca
     6301 tgccgatatc gatggtgcgc tcaccgacct cgccaggctc gatgccgcaa ttcgctcgcc
     6361 agcacaaacc tggatcgaca aggcgcgggc ccgacaagct gcgctcactg ccgcgcgtca
     6421 actcgttggc gatgccacgc gggcgttggg caagcgatga ggttcggatg atccgcatcg
     6481 ttctttttct ggcatcggtc acggtcattg ccgccggctt tgcctggatc gccgatcgcc
     6541 cgggcgaagt tgcaataacc tggctgggct accgtgtcga aacgtcagtg atggttgcgg
     6601 ccttcgcgat cgccgtgctc gtgctcatag tcacgctgct atggtcgatc atgcgcagta
     6661 ttttgcgatc gccagagcag gtgtccctgt tttttcggca caggcgcgcc gtcaaaggct
     6721 acctggcggt cagccgcggc ctgatcgcaa tcggagccgg agatctgcaa ctcgcgcgga
     6781 aatccgccga cgaggcggca cgcctgtctc ccggggatcc gctcgcgctg ttgctcaccg
     6841 cgcaatcggc ccagatggcg ggcgatcgaa ccacggccga gcgcgcattt cgagagatga
     6901 cccgacgcga cgaaacaaag ttattgggat tgcgcggtct ctatatagaa gcacagcgcc
     6961 gcaacgatgg cgccgccgct cggcatgcag ctgaggaagc agcgaagatc agtcccgcgg
     7021 tggcgtgggc cggacaggct gtgctcgact atcgctgcgc cactggtgat tgggctggcg
     7081 cgctcgaagc gctcgatcac atgaagcctt cactggaaaa acccgactat cgccgcaagc
     7141 gcgcagtgct gcttgtcgcc cgcgcgcagg cgctcgaaga tatggaccgc gacacctcac
     7201 aaaaactggt tctcgaatcg gtcaagctcg caccggatct cgtgccggca gcggcattgg
     7261 cgggccgtcg gctggccgaa tccggcgagc cgcgcaaggc gcgaaaaatc ctggaggcag
     7321 cgtggacgat caacccacac ccagacatcg cggaaagcta cgccaacctt cgattgggcg
     7381 acagtgcgcg ggaacgtctc gcccgcatgc agaagctcgc cagcaaagtt cccggccaac
     7441 tcgaaggcgc gctggctgtt gctcgagctg cgctcgatgc acgcgatttc gcgacagggc
     7501 gcggcgcgct cgcgccctac ttatctgcac cgacgcggcg tgttgcaacc ttgatggcgg
     7561 agatcgagga aagcgagcac ggtgacgaag ggcgtgtgcg cgaatggatg gcacgcgcga
     7621 tgcgtgcatc cggcgatccg gtttggactg ctgatggcgt cgtgtccgag cgctggctgc
     7681 ctgtatcacc gaatggacgg cttgacggct ttgagtggaa agttccactg gccgaaatcg
     7741 gcgtgactcg tccggtcatc gaggttacaa cgcctcccgc ggatacgatg ccggagccgc
     7801 cgcccacggc gtcggagaac aaacctgccg acaggccgcg caagcgctta aaatccagca
     7861 tgttcagcaa gacgacaccg gtgcagcctg tcatcccttt ggtgcatgca cctgacgatc
     7921 cgggacttga gtcgggcctt gatcgcgatc cggtgccaga aacctcgggt ccgccagcga
     7981 acgacgcgtg gcagcgcctg cgccaattgt tccgataatc gcggcaaaac ggatggggtg
     8041 cgtattgctt gccaagcgag gtccgcgccg atatcagttg cgcggttcca gccggcgtag
     8101 ctcagcggta gagcatccgc ttcgtaagcg ggtggtcggg ggttcaaatc cctccgccgg
     8161 caccgctgtt gtccattgac atcaccgggg acaaatcgtg caggcccttg gctcattcaa
     8221 ttgcttgaaa gtacggtata atttatgatc gggacttgag gctgggggtg gggttactga
     8281 ctttccgaat cctgtcattt tccctcccgc acccgtaacg taggatgctg atcggatcag
     8341 tcactgttct gcagagcaac actatggcca aacccactgt cattctcgtc ggcgctgata
     8401 aaggcggcgt gggcaagact actgtcgccc gcactctgat tgattatttc ggcgcccatc
     8461 aaacgccgac ccgggccttc gataccgagt ggccacgcgg aactcttaag cgatttcatc
     8521 cggatttgac cgaagtcgta gacgtgactt cggttcctga ccaaatgaaa atcttcgata
     8581 ctctcggcag cgccgaagca aaggtgactg tcattgacgt gcgcgccggt ttgttgtcgg
     8641 cgacgctaca ggcgctgacc gatatcggat ttctcgaatc agccaagaag ggacagatca
     8701 ctttcgcggt gttccatatc cttggatcat ccatcgcgtc tcttgacgag atcgctgaga
     8761 cggcgcgcgt ggtaggcgat gccaactatt tcctggtcaa gaacttcatc aacaacacaa
     8821 cgttcttcga gtgggatccg gcggtctaca attcgtactt caaaaagatc aagggcgctg
     8881 aagagatcat catcccgaaa ctgaacgaga tggcgttcga gcaggtggaa gtggcaagcg
     8941 ttccattcgt ttcatttgtt ggcaacaaaa gcgccaaggg tgaggcggcc aactattcat
     9001 ttgtcttgcg cggctacgtg cgtcactggc ttggcaatgt ctggggcgaa ttcgaccgcg
     9061 taaagctggt cgatatggtt tcgccgaaaa tcgaaagcaa cgtgcgtcag gtcgcgggct
     9121 agcctccttc tacttgcgcg ccgattgagc ggcggtgtga gcgatgtcat ttcgcagctc
     9181 catcaccatt gtcgcctcgc cgcgaccccg cgtgggcaag accttgctcg cgcggctgct
     9241 cactgacttt cactcgcacg agggccgcct ggtgacggct ttcgacctca ataccggcga
     9301 caggacgctg gcgcaattcc tgcccgaaaa gaccgcgacg gcttccatac gcgatgtcaa
     9361 cggccaaatg gcactcttcg atcatttggt cgcatacgag gatatcacca agatcattga
     9421 cgtcggtcat gaagcttatg aagggttttt ttcgttggcc cataacatcg gatttgtcga
     9481 cgaagcccgg cggcgatcga ttgcggtggc cattttgttc atggtgactc ccgatcacac
     9541 ctcggtcacg gcttatcgca gcctgcgtga gcgcttcacg catgcgacgc tggcgcccgt
     9601 gcataacgaa atgctcgggc ccgcgcagca tcgcgacaaa tatccgctgg ctagcggagg
     9661 cccgggcgtg gtgcgcatgg cagtgctcgc gccgggtttg cgcagataca tcgaaacgcc
     9721 gccgttttcc tttgcggatc ctcgtatcgc cgatccagcc cgcattcctg acactgcata
     9781 tgccgagctt gagcggtggt tacgccgaat ttatttggag ttccgtgaac tcgatttgcg
     9841 catattgctg gccgatttac ggtcatccat ccaattcagc tcgcattcac aatagtgagg
     9901 gaaccgaagc cgccgtcagg cgtttccttg gccggacttc cccggcgagg tgttcgctgg
     9961 cggaagggag gcgagccatg tggattacac tcttcacgat cgttatcggg attgcatttt
    10021 gcttcgctct tggggcgaag gtcctggaat cctatgagga gaatgcccgt ccttgatcaa
    10081 tggacgtcgt gtttcgttac gcggccgcaa ggccgcattt ttttgcattg tgccagggcg
    10141 gggcgcccgg aactttgcaa taataggaca gcatgccggc acccttgttg ctgtccagga
    10201 aatttgcccc gcttttctgg tgccaattct tcgcggcatt caacgacaat ttcctcaaga
    10261 ctgcacttgt ctttgtgatc ctgttccaat cgggcatcag caatcctgaa gcgttgatta
    10321 cgtccgccgg ggcagtcttc atcgctccgt tttttttcct gtccgggctt ggtggacaac
    10381 ttgcagaccg ttacgacaag gcccgggtgg cgcagcgcct gaaattcgta gagattttcg
    10441 tggccgccat tgcggcatgg ggctatgcgc ggacttcgct gccgctgttg tttggcgccc
    10501 tgttcggttt cggcattctc gccgcgctct ttggtccgac caaatacggc attcttcccg
    10561 atcatttgtg gcgcgagcaa ttgcccgccg gcaatgcgct ggtggaaggc gccacctttg
    10621 tcgccattct tctgggtacc attggcggcg ggcttgccgc cactcacggc ggaaatgcga
    10681 atgccttcgt cgtcctcatc atggtcttcg cagtagcatc gtggctgtcg gcgctgctta
    10741 tcccgccgac tggcgagggt gcaccgaaac tcgcaatcca aatcaatatt gcgaactcga
    10801 ctctggcgat gctccggcat ctgcgcgccg attcgcggct gtggtggggc gccatggtgg
    10861 tgagctggtt ctggctcgtc ggcattgtgg tactgtcgtt actgcctccg ctgatcaaga
    10921 tgcttggcgg aaacgagaac agtgtcaccg cctatcttgc agtattcacg attgcggtgg
    10981 gtctcgggtc ggcgctggcg gcggcgatcg cgcgcggtcg cattattctc acgaccacgc
    11041 tcgccggagc gctgttgctc ggcatcttcg cgctcgatat cgggattgcc gctttcgaga
    11101 ctgctcctgc tacggggtcg caagggcctg tctcggtatt tgcgtcgacc tccggcggtc
    11161 gtgtggccgc aggcttgtgc ggccttgcga tcgcgggcgg cctgttcatc gtgccgacct
    11221 ttgccgcggt gcaggcctgg agcggcgcgg atcagcgcgc gcgcacgatc gcagcggtca
    11281 atatcctcaa tgcggcattc atgacagccg caacaattgt cgtggcggtc atgcagaagt
    11341 tgggcgcgac cgtccctctc ttattcatga tgattggtgt cgctacgctt tgcgtggccc
    11401 tggcaatctg gcggaccatg ccgaaggacg actaggatat cacttgcgca tcttcagcac
    11461 gcggtcgacc attttgccgg cgacgccgag ataatttgct ggatcgacaa gcttttccag
    11521 tttcttgcgg tcggcatatt tgccgatttc cttgttctca gcgagaaggt cgatcagcgg
    11581 acgccctgtt tttacgacat cgcggcagat gtcatagacg agatcgtgtg ccttgttgcg
    11641 cccgagctcg gcgccaagcc ccatcatgac tgcctcggac atgatcagtc ccttggtgat
    11701 atcgag
//
LOCUS       DATDHO010000993         4714 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_49205, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000993 DATDHO010000000
VERSION     DATDHO010000993.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4714)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4714)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4714
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49205"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..752)
                     /locus_tag="VIY07_19440"
     CDS             complement(<1..752)
                     /locus_tag="VIY07_19440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383968.1"
                     /translation="MSSKMRVRMRWLVVAAVLALAQSASVAVQARGLFDWFGGGLFGS
                     RPREDDSYRPPRPRQQQPKQHTQQEPSESSRAPLPKKTEAKDEQIGPRTSIVVMGEWP
                     TGLGYGLEDVFSDTPEIRVVRKNKLNSDLLHYDAKGDLDWSRVARDTLAQEKADYVVM
                     MLGVGDRQAIREKDLAREADTRAKDQQAKDQAVKDPQTKDRQAKDEAEKKDGQKSENG
                     TSSAQRAKKPVSPAEFRSEEWETIYSRRIDDT"
     gene            complement(1025..1243)
                     /locus_tag="VIY07_19445"
     CDS             complement(1025..1243)
                     /locus_tag="VIY07_19445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383969.1"
                     /translation="MATDPWLLRLEGPKGKKWDDGIERISTQSVFAILEVPYRFRTAG
                     ACRRLSKLMRDLGWSPIKARGLTPGGFS"
     gene            complement(1370..1891)
                     /locus_tag="VIY07_19450"
     CDS             complement(1370..1891)
                     /locus_tag="VIY07_19450"
                     /inference="COORDINATES: protein motif:HMM:NF023113.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2380 domain-containing protein"
                     /protein_id="HEY6383970.1"
                     /translation="MRRREFVTWPLLVFVALAPWFSAGRLLATEHDAISVVVADFDYE
                     DTSGEMEDKRAAHTARVKMFPDLVRERLAREDKYKVLRLDCTQAACSSHSIGAEDLVA
                     AALKADARLLIYGRIHKMSTLIQWGSIQVVDVKQKQLLLNRLFSFRGDTDDAFRRAAE
                     FVGEMLKDVTPKL"
     gene            2097..4256
                     /locus_tag="VIY07_19455"
     CDS             2097..4256
                     /locus_tag="VIY07_19455"
                     /inference="COORDINATES: protein motif:HMM:NF014850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 2 TIM barrel-domain
                     containing protein"
                     /protein_id="HEY6383971.1"
                     /translation="MNRLIVGTIAFLCASFDIALAQTFTPHAEIRRDTPLVDGWRFVK
                     RDVTGAEQENFDDQSWDVISIPHTWNARDGQDGGNDYYRGPGFYRRHFFIDASEVGRQ
                     IFVHFNGVNTVTDVWVNGAYLGQHRGGFGMFRFEMTSVVRVGGDNVLAVRVSNAPFPD
                     VAPLTADFTFFGGIYRGVHILSVQPVHVVMSNYASPGIFLTPSKVSAASATLAVRGDV
                     YNGDTSAQDIEVKTTVVGADQKVLTVLSTVVHAEAKASVPFSVQTSVADPHLWQGRDD
                     PYVYTTYTVVSTGGQARDMIVQPLGFRSFRVDAEQGFFLNDKYLDLYGVNRHQDLLDR
                     GWATSSDDDDRDFSLIAEIGATAVRLAHYQHNQHVYDLTDKLGFVVWAEIPNVDSVNA
                     TPAYLATTQQQLLELIRQNYNHPSIVFWSVGNELGARAGPDPTATVQSLIALAKAEDP
                     SRFTALATMSGIDGVAVRSAADVIGYNVYLGWYGGSPSDLAEYLDGLHQSLPGRSLCV
                     SEYGAGASVRQHQSSPSQPSPGGPFHPEGWQSFFHETYWKSMKTRKYLSCKFVWNMFD
                     FASDSRNEGDTPGRNDKGLVTYDRVTRKDAFHWYKANWSASPTVHIAQQRYNPRSGGN
                     VAVRVYSNLPHIELKVNGASQGVQTSNEHIFTFNITLPPGATTLVEACGSVASSRVCD
                     AVSWTALPLDIGGRDPEHGRCASRSPQAREQDTLCLR"
     gene            complement(4326..>4714)
                     /locus_tag="VIY07_19460"
     CDS             complement(4326..>4714)
                     /locus_tag="VIY07_19460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383972.1"
                     /translation="PLADAEKGAADFIVGQSAEKQQKAKLLFAGLFATLSRERDDVMA
                     GIWRFSLRQQQLRERISAELTNLRAQQDAPNQDQTAIEKLGDQIAWETRVFDERRNTI
                     GYVCEVPSTIERRLFALARVIQQKLD"
BASE COUNT          935 a         1417 c         1300 g         1062 t
ORIGIN      
        1 atcgtgtcgt cgatgcgccg cgagtagatc gtttcccatt cctcgctgcg aaactcggca
       61 gggctaacag gttttttggc acgctgcgct gaggacgtgc cgttctcgga cttctgccca
      121 tccttttttt cggcttcatc tttggcctgc cggtccttgg tctgcggatc cttgaccgcc
      181 tgatctttgg cctgctgatc cttggctctt gtatcagcct ctctggcaag atccttttcg
      241 cgaatggcct gacggtcgcc gacgcccagc atcatgacga cgtagtcggc cttctcttgc
      301 gccaacgtat cgcgcgcgac gcgggaccag tcgagatcac ctttcgcgtc gtagtgcagc
      361 aggtctgagt taagtttgtt cttgcgaacg acgcgaatct ccggcgtatc ggagaagaca
      421 tcctcgaggc catagccaag cccagtcggc cattcgccca tcacgacgat cgacgtccta
      481 ggcccgatct gctcgtcttt cgcctccgtt tttttcggca gcggcgcgcg cgagctttcg
      541 cttggctctt gctgtgtgtg ttgttttggt tgttgctgcc gcggacgcgg cggacggtag
      601 gaatcgtcct cgcggggtcg cgaaccgaat aagccgccgc cgaaccaatc gaaaaggccg
      661 cgggcttgca ccgccacgct ggcggactgg gctaacgcca gaacagccgc caccacaagc
      721 caccgcatgc gcactcgcat tttgctagac atgttgccag atcggttagc gttcgatttc
      781 ggccacaatg ggtcgccacc gcgagttccc ggtggaaacg atcacaccat cacacctcca
      841 agtggacggt tacgtcgcgc gaggttacct tgcagtggtt ttatggttta ggagaggggt
      901 ccgcatggcc tcttcaactg cgcacccaac accacgttag ttacatgatg gtccaatggt
      961 tttagtttcg gtcggctaca tcacggtttg cctagtagtg tctctggcgt atccgcggac
     1021 ttggtcacga aaaccctccc ggcgtgagcc cgcgtgcctt gatcgggctc catcccaggt
     1081 cccgcattag cttagacaga cgacggcagg cgcctgcagt gcggaagcgg tacggcacct
     1141 cgaggatggc gaacacagac tgcgtgctga tccgctcgat gccgtcgtcc catttcttgc
     1201 ctttaggtcc ctcaaggcgc aacagccagg gatctgtggc catatgcgcc tttcttcgct
     1261 agaaccgaaa tttacagccc aggctggcag aaactttgcc tccacactgt agcaatgcga
     1321 accactaatg atgttcaagc ggcattctga cgcaacactg agcgtgctct tacaatttcg
     1381 gcgtaacgtc cttcaacatc tcgccgacga attctgccgc tctgcgaaat gcatcatcag
     1441 tatcgccccg gaatgagaag aggcggttca gcagcagttg cttttgcttt acatcgacga
     1501 cctgaatgct gccccactgg atgagcgtac tcattttgtg gatgcgtcca tagatcaaga
     1561 gccgcgcatc ggccttaagc gcagccgcga caaggtcctc cgcgccaatg ctatgggatg
     1621 agcaggccgc ctgagtacaa tcgagccgca agaccttgta cttgtcctct cttgccagcc
     1681 gctctcgcac aagatcgggg aacatcttca cgcgcgccgt gtgtgccgcc cgtttgtcct
     1741 ccatttcccc tgaagtgtct tcgtaatcga aatccgccac caccaccgaa atggcgtcgt
     1801 gctccgtcgc caggaggcgc ccagcggaaa accacggtgc cagcgctaca aataccagca
     1861 ggggccaagt gacaaactca cgccgcctca ctgtcctcgg tccgtaacag ggtacgatta
     1921 caagctttgc gctcgtggtg gtacccgacg gcgcttctgg cgaaagtgcc cttctccata
     1981 ggtatcgcat cgcgttcgtt aatgacccag acattgctac catggttcaa cccgctcaaa
     2041 aaacgccgat gtagtattct ggaatgacgc ccgccgtgaa tttttgggag gtcggaatga
     2101 accgcctcat cgtcgggaca attgcgtttc tctgcgcttc attcgatata gctctggcgc
     2161 aaacgttcac gccacatgcg gagatccgac gcgacacgcc gttggtcgat ggttggcgtt
     2221 ttgtaaaacg cgatgtgact ggcgcagaac aggaaaactt cgacgaccaa agttgggacg
     2281 tcatctctat cccccacacc tggaacgccc gcgacggtca ggacggcggc aacgactatt
     2341 atcgcggccc cggcttctac cgtcgtcatt tcttcatcga tgccagtgaa gttggccgcc
     2401 aaattttcgt tcatttcaat ggcgtcaaca cggttaccga tgtctgggtg aatggcgctt
     2461 acctgggcca gcatcgtggt ggcttcggga tgttcaggtt cgaaatgacc tccgttgttc
     2521 gggttggcgg ggataacgtc cttgcagtgc gggtgagtaa cgcgccgttt cccgatgtcg
     2581 cacctctcac ggccgatttt acttttttcg gtggaatcta tcgcggagtg catattctct
     2641 cggttcaacc cgtgcacgtt gtcatgagca actacgcgtc gcccggcatc tttcttacgc
     2701 cgagcaaagt cagcgccgca tcagcgacgc tggcggttcg cggcgacgtc tacaatggcg
     2761 atacatccgc ccaagatatc gaagttaaaa cgactgtcgt cggcgccgac caaaaagtgc
     2821 tgacggtcct cagcactgtc gtccacgccg aagccaaagc gtccgttcca tttagtgtcc
     2881 aaaccagcgt cgccgatccg catctgtggc aaggccgcga cgatccgtac gtctacacga
     2941 catacaccgt agtttcgacg ggcggccaag cacgcgacat gatcgttcag ccactcggtt
     3001 tcaggtcatt tcgagtcgat gcagagcagg gtttttttct gaacgataaa tatctcgatc
     3061 tctatggcgt caaccgccac caagacctgc tcgatcgcgg ttgggcaacg tcgtcggatg
     3121 atgacgaccg cgacttcagc ctcatcgctg agatcggcgc gaccgccgtc cgattggcgc
     3181 attaccagca taaccaacac gtttacgatt tgaccgacaa gcttggattc gtcgtttggg
     3241 cagagattcc aaacgtcgat tccgtgaacg caactcctgc atacctggct acgactcagc
     3301 aacagctgct ggagcttatc cggcaaaact ataatcatcc ttcgattgtc ttctggagcg
     3361 tagggaacga gctgggagct cgtgccggcc cggatccgac tgcgacggtc cagtcactga
     3421 tcgccttggc caaggccgag gatccgagtc ggttcacagc gctcgccacc atgagcggaa
     3481 tcgatggcgt ggcggtccga agcgcggccg atgtcatcgg atacaacgta tatctcgggt
     3541 ggtacggcgg cagtccatcc gatctcgcgg aatacctcga cggcctgcac caatcgctcc
     3601 cggggcggtc actgtgcgtc agcgaatacg gcgccggggc aagcgtgcga cagcaccaat
     3661 catccccttc gcaacctagt ccaggtggcc cgtttcatcc ggaggggtgg cagtcgttct
     3721 tccatgagac atactggaag tcgatgaaaa cccgcaaata cctgtcgtgt aagttcgtct
     3781 ggaacatgtt tgatttcgcc agcgacagtc gcaatgaagg cgacacgccc ggtcggaacg
     3841 acaaaggact cgtgacgtac gaccgcgtga cgcggaaaga tgcatttcac tggtacaagg
     3901 cgaactggtc ggcttcgccg actgtccaca tcgcccagca gcgctacaat ccgcgctctg
     3961 gaggcaacgt ggccgtacgc gtctattcca acttgccgca catcgagttg aaggtgaacg
     4021 gagcctcgca gggcgtccag accagcaacg agcatatctt caccttcaac atcacgcttc
     4081 ctccgggagc cacgactttg gtcgaggcct gcggtagcgt cgcgtccagc agggtatgcg
     4141 atgccgtcag ttggactgcc ctgccgctcg atattggagg ccgagacccg gagcatgggc
     4201 gctgcgcttc acgttctccg caggcgcgag agcaagacac cctctgtctt cgctgaactt
     4261 gtgctcatgg gcgctgctca ggcttttgag atgacgcgtc taggttactg acagtgcctg
     4321 ctggttcagt ccaacttctg ctggatgacc cgtgccagcg caaatagtcg gcgttcgatc
     4381 gtagacggca cctcacatac gtagccaatt gtgtttcggc gctcgtcaaa cacgcgcgtt
     4441 tcccaggcaa tttggtcgcc aagcttctcg attgcagtct ggtcctgatt gggggcgtcc
     4501 tgctgcgcac gcaaattggt cagttcggcg ctgattcttt ctctcaactg ctgctgccgc
     4561 agcgagaagc gccaaatgcc ggccatgacg tcatcgcgtt ctcgactgag agtagcgaaa
     4621 aggccggcga acaaaagctt tgctttttgc tgtttctcag cactctgtcc gacaatgaag
     4681 tcggcggcgc ctttttccgc atccgcaagg ggag
//
LOCUS       DATDHO010000994         2394 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_49346, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000994 DATDHO010000000
VERSION     DATDHO010000994.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2394)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2394)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2394
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49346"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(203..1577)
                     /locus_tag="VIY07_19465"
                     /pseudo
     CDS             complement(203..1577)
                     /locus_tag="VIY07_19465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087945.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS701 family transposase"
     gene            complement(1629..2390)
                     /locus_tag="VIY07_19470"
     CDS             complement(1629..2390)
                     /locus_tag="VIY07_19470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086558212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEY6383973.1"
                     /translation="MRYELTDYEWASIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGA
                     PWRDLPNIFGPYTTCYNRFVRWRRAGVWIKIMSALAHAHDSAVQMIDTSIVRVHQHGA
                     CIIRNRRQSMGRSRGGLTSKIHAVVDTNGLPVRLALTAGKAHDNRLANKLLSRLKSGS
                     MLLADRGYDADWIRALAARKGALANIPPRCNRSEPICFSPYLYRARNLVERFFNKIKH
                     CRRVATRYDKLAANYLAFVQLASIRLWLRVNESTP"
BASE COUNT          463 a          757 c          707 g          467 t
ORIGIN      
        1 acgctgctcg cccgcgccga cgacgtgatc gagtagacga gccttccgag cactcgttgt
       61 tgcatccgct cacggcagct cttggcacat agcggacgtt gcggaacgtc cgctagctgg
      121 tcgctatcag gggtaaagcg gacatgtgcc gaacaatcgc gatttatgag tacacgccct
      181 agcactactt tggcagattt actcacggcg ctgggcgttg ccaatccatt tgcggcagtg
      241 cgggcatcgc tgcggcggtg gtcgagcgaa cagtacgagg atggcgtgac ggacggcggg
      301 caaggtcggc tgcggcggcg gtccgttggt tctttttttc ccgccttgct gtcttgagcc
      361 ggcgatactg gaggaaagcg tacgcgatca tcgtcatgag cgcatgacga tgcaggcccg
      421 gccaggatcg gccctcgaag tgatcgagac cgagttcttc tttcagctgc tggtgagcct
      481 gctcgcaaat ccatcgcgcc ttgatggtag ccgcgagcgt gcgcagatca gtcgtcgccg
      541 gcagattggc gagatagtat ttcgtctctc ccgaccttct gtgttcgccg atgagccaag
      601 cctcctcacc gggcagatgt tgctgaccct tgtccctgat ccgctgcggc ggtccgtcgg
      661 caacccgcac gcgagcagca gcaaaacgag ccttgagctt gcctttcgtg ccggtgcgcc
      721 aactgatggt gtgccacttg gcgtcagcca gcatgtcttc tgccggtatc gacaggacat
      781 ccggaacgtg ccgccgacgg ggacggccac gcttggcaac cggccagatc atcttcacat
      841 cggcaggata caccttgagg tgtcgcggaa tgccgaccgc ccaggtcagg ttccgtgctg
      901 tgagcgcctg gcggaacggc gcgctcatcc cataaccggc gtccgccagg acgcagccaa
      961 agcgtacgcc ggccatgacg gcacggtcga tctccaccag agccaattcc ggcttcgtgc
     1021 gcgccgttcg atattcgacc ggaacacccg cgcgcttcag ccgggtccga tcgcttgtcc
     1081 aactctcggg aagaaacaat cgcaacgcca acatgaccgg cacttcgccg cgtgccagcg
     1141 tcagggacac cagggtctga cagttggctg tcttgcccag cgccgaagca tactgcgcag
     1201 cgacaccgac cgaatgcgtg cctttcttgg gtatcgccgt gtcgtcgatc accagcacgg
     1261 catcgctacc gccgacgagc ttgtccgctt gaaccagtag ttccgtctcc accggcccgg
     1321 catcccagac cccggccgcg atgaagtggt gcaattgatc gtagtcccca agcgcaaccc
     1381 gctccgccat cggctgaacg ctcttgcggt cgccaggacc gatcagtccc gacacgtaga
     1441 gcgggcacat ttgtcgccgt gctttgtgac ccaaccgatc cacaaacggc ttcagccaac
     1501 gtccaagctc gcctctccag tccaatgtcc tgccaaccat ggtcggcccc tccaaaagcc
     1561 gaccacccat gagtcacaga aaaactgatt tgggaatcct ctgccgctaa aaatctgcca
     1621 aagtagtgct agggcgtgga ctcattaacg cgcagccaga gcctgataga cgcaagctga
     1681 acgaacgcga ggtagttggc cgccaacttg tcgtagcgcg ttgcgacccg gcgacagtgc
     1741 ttgatcttgt tgaaaaacct ctcgaccaaa ttgcgggctc gatacagata cgggctgaag
     1801 caaatcggct cgctgcgatt gcatcgcggt ggaatgttgg ccagcgcccc cttcctcgca
     1861 gcaagggctc ggatccagtc ggcatcatag ccgcgatctg cgagcagcat tgatccggac
     1921 ttcaagcgcg atagcagttt gttcgcgagc cggttgtcgt gggccttccc agcggtcagc
     1981 gcgagccgca ccggcaggcc gttggtatcg acgaccgcat gtatcttgct ggtcagcccg
     2041 ccgcgtgacc gtcccatgga ctgtctccgg tttcggatga tgcaggcacc gtgctgatgc
     2101 acacggacaa tcgacgtgtc gatcatctgc acggcggagt catgagcgtg ggcgagtgcg
     2161 ctcatgatct tgatccagac gcccgctcgt cgccagcgaa cgaagcgatt gtagcacgtc
     2221 gtgtacggac cgaagatgtt cggcagatcg cgccatggcg ccccagatcg caagacccag
     2281 aagatgccat tgagcacacg acggtcattc actcgtggca cgccgcgcgg cttattcggc
     2341 agcatcggct taatggaagc ccactcatag tccgtgagtt cgtagcgcat gatt
//
LOCUS       DATDHO010000995         4985 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_49388, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000995 DATDHO010000000
VERSION     DATDHO010000995.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4985
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49388"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..400
                     /locus_tag="VIY07_19475"
     CDS             <1..400
                     /locus_tag="VIY07_19475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383974.1"
                     /translation="QLVCEKLRSIAVHPRAGNANNASRTASEVEPSHPSESEHHLVYT
                     LNPLRWWENGKLRNVPAYARVELPKTLLLVALRHQHVDYLNARRVQTLMKVHGSGLFQ
                     APPHADDPRLVDLDALATREQESAKPDHAA"
     gene            528..926
                     /locus_tag="VIY07_19480"
     CDS             528..926
                     /locus_tag="VIY07_19480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HEY6383975.1"
                     /translation="MVFDRKWLRRVALLGGIACLGLPTLSASEDADGQLMFNNACRTC
                     HSIREGENRLGPHMRGIIGRKAGSLPDYSYSSAMKGADFVWDENNLDRFIEKPDETVP
                     GNTMKPYGGLPSAESRAKLVAYLKTLTANQ"
     gene            complement(981..1235)
                     /locus_tag="VIY07_19485"
     CDS             complement(981..1235)
                     /locus_tag="VIY07_19485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6383976.1"
                     /translation="MKRQILIVTAAALTAAAVILSGTSAATAQQVPQYQAAGFPITPL
                     QMLALQPSARITEQQRLGAQRTMDASRRVYPDFGLAKAGW"
     gene            complement(1444..1935)
                     /locus_tag="VIY07_19490"
     CDS             complement(1444..1935)
                     /locus_tag="VIY07_19490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HEY6383977.1"
                     /translation="MPDHESNAMEGGCTCAAVRYRLKARPLFVHCCHCTWCQRETGSA
                     FAVNALIEASQVELLKGKPARTTLPSASGKGQVFWRCADCGVTVWSNYPQAGPNIHFI
                     RVGTLDDPSRVPPDIHIYTSTKQPWVVLPDGVPAVAEFYRPAEYWPAESGTRFKAARE
                     AAG"
     gene            complement(2022..2948)
                     /locus_tag="VIY07_19495"
     CDS             complement(2022..2948)
                     /locus_tag="VIY07_19495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HEY6383978.1"
                     /translation="MAPRAYWKGFLRLSLVSCPIQLFPATSEREKISFNQINSETGNR
                     IRYRKVDEDTGDEVTQDQIVKGYQVDKGKYVEITDEELDAVALDTTRTIEIDKFVPRS
                     EIDDLYLIRPYYIAPDGKVGQDAFAVIRNIIKQMDMVAIGRVVLTSREHVISLEARGK
                     GLMGTLLRYPYEVRDENEYFDDIENLKLGKDMMDLAAHIVKTKTGHFEPEEFEDHYET
                     ALKELIEKKMKGIKIEAPARSEPSKVINLMDALRRSAEQQQPARKQQGKRGRKRIEGQ
                     KEMLFPISGAGKKPAKEVARKPARSAGRRKAG"
     gene            complement(3118..3279)
                     /locus_tag="VIY07_19500"
     CDS             complement(3118..3279)
                     /locus_tag="VIY07_19500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEY6383979.1"
                     /translation="MSSVFAFLKDESGATAIEYGLIAAGISIVIIASVNAIGSSLNSR
                     FDTISTQLK"
     gene            complement(3480..3641)
                     /locus_tag="VIY07_19505"
     CDS             complement(3480..3641)
                     /locus_tag="VIY07_19505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Flp family type IVb pilin"
                     /protein_id="HEY6383980.1"
                     /translation="MSKLYAFLKDESGATAIEYGLIAAGISVVIIATVNAIGSNLNGK
                     FNSISTQLK"
     gene            complement(3978..4355)
                     /locus_tag="VIY07_19510"
     CDS             complement(3978..4355)
                     /locus_tag="VIY07_19510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6383981.1"
                     /translation="MTNMTTVEIKAFVPARDFDLSKRFYQDLGFTLAWSSDDLAYFRH
                     GESSFLLQNFYNKEHAGNFMMHLLVEDLDAWWRHVESQNVVTTYGVMAEPPTDRPWGM
                     RDFVIVDPTGVLWRIAQNIPKND"
     gene            4471..4974
                     /locus_tag="VIY07_19515"
     CDS             4471..4974
                     /locus_tag="VIY07_19515"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEY6383982.1"
                     /translation="MDQPTARFKDQLFNSPNEVRIMDQLAEWNRQHLDARYASAQLYS
                     PRSKRLRVVAQREFAPALIGQFHDMPLTSGTMCARAARLRTPILVPDVTADSDWTPFL
                     SFSEAAGFGGVLSIPLLSKAGDLIGVTSCHFSGHAKPTEKELNFARVSCDFASDAIVE
                     LRRRQRQ"
BASE COUNT         1014 a         1499 c         1454 g         1018 t
ORIGIN      
        1 gcaattggtt tgcgagaaac tacgatccat tgcggtgcac ccgcgcgcgg gcaatgcgaa
       61 caatgcatcg cgtacagcgt ccgaggtgga gccgtcgcac ccgtcggaga gcgaacacca
      121 cctggtctat acgctcaatc cgctgcgctg gtgggagaat ggcaagctgc gaaatgtgcc
      181 ggcctatgcg cgcgtcgaac tgccaaaaac gttgctgctg gtcgcgctgc ggcaccagca
      241 tgtggactac ctgaacgccc ggcgagtgca gaccctgatg aaggttcatg gcagcgggct
      301 gttccaggcg ccgccccatg ccgacgatcc ccgtctcgtc gacctcgatg ctcttgccac
      361 acgcgagcag gagagcgcca agcccgatca tgccgcgtga gcgcggcttc ttgcgtcaaa
      421 cgggcatgga acataagcca ctcgatgtcc gttcctaccc aaagcggaca tgatccgcat
      481 gcagcatcaa agttcggttt taaaagccga tcggaatggg gtcggaaatg gtgtttgacc
      541 gcaagtggct gagacgggtc gcgctgttag gcgggatcgc ctgcttggga ctgccaacgt
      601 tatctgcatc ggaggatgca gacggccagc tgatgttcaa caacgcctgc cgaacgtgcc
      661 actcgatcag ggagggcgag aatcgcctcg gccctcacat gcgaggcatc atcggaagga
      721 aggctgggtc gctgccagac tattcgtatt ccagcgccat gaagggcgca gacttcgttt
      781 gggatgagaa caacctcgat cgcttcatcg agaagcccga cgagacagtg cccggcaaca
      841 ccatgaagcc ctacggtggt ctgccatcgg ccgagagcag agcaaagctc gtcgcttacc
      901 tgaagacgct cacggccaat caataggacg tcacggtccc gctgcgccga gtgacgcccc
      961 gaagatcaag acggacgcgc ctaccagccc gccttggcga gaccgaaatc gggatacaca
     1021 cgcctcgatg cgtccatggt gcgttgcgca ccaaggcgct gctgctccgt gattctggcg
     1081 gacggctgca acgccaacat ctggagcggg gtgataggga aacccgcagc ctgatactgt
     1141 gggacctgtt gagcggtagc cgcgctcgtt ccactgagga tgacggccgc tgcagtcaaa
     1201 gctgccgctg tcacaatcaa gatttgcctt ttcatggggt ggctctcatg ttcgagtgaa
     1261 ttgtcaccca tcattcaaca cccaaaggac ggacccgaca gtgacgcacg tcactcaggc
     1321 ggcgtgatgg ccgtcacgaa aaaggcgatt catttatcat gaaggtcagt cggactatcg
     1381 cggtaccggc gcacacgctg aagcggccga caaaattgga accgatcgtg actgctggta
     1441 aatttatccc gcagcttctc tcgctgcttt gaaccgcgtt ccgctctcgg ccggccagta
     1501 ttcggccggg cggtagaatt ccgcgaccgc aggaacgccg tccggcaaga caacccaagg
     1561 ctgcttcgtg gacgtgtaga tgtgaatgtc aggcggaacg cgcgagggat cgtcgagggt
     1621 tcccacccgt atgaaatgaa tattcggacc tgcctgagga taattgctcc aaacggtcac
     1681 cccacagtcg gcgcagcgcc agaaaacctg acccttgccg ctggcgctgg ggagcgtggt
     1741 tctcgccggt ttgcctttca ggagttcgac ttgcgacgcc tcgatcaagg cgttgaccgc
     1801 gaaagccgat ccggtctcgc gctggcacca cgtgcaatgg caacaatgca caaacaacgg
     1861 tctcgccttg aggcggtaac gtaccgccgc gcaagtgcag ccgccttcca tggcgttgct
     1921 ctcgtgatca ggcactgcca actccacgcc gtcaatgacc ggcgttgaaa gcaactccaa
     1981 tagcgctctg cagtactggt aagaacgact aaggcgaaat ctcagccagc cttccgtcgt
     2041 cccgctgacc gtgccggctt gcgcgccact tcctttgccg gcttcttgcc ggcgcccgag
     2101 atcggaaaca gcatttcctt ctggccctcg atgcgcttgc ggccgcgctt gccctgctgc
     2161 ttgcgcgccg gctgctgctg ctcggcgctc cgtcgcagcg catccatgag attgatgact
     2221 ttcgacggct cgctgcgcgc cggcgcctcg atcttgatgc ctttcatctt cttctcgatc
     2281 agctccttga gcgcggtctc gtagtgatcc tcgaactcct cgggctcgaa gtggccggtc
     2341 ttcgtcttca cgatgtgcgc cgcaaggtcc atcatgtcct tgccgagctt gaggttctcg
     2401 atgtcgtcga aatattcgtt ctcgtcgcgc acctcgtagg gatagcgcag cagcgtgccc
     2461 atcaggccct tgccgcgcgc ctcgagcgag atcacgtgct cgcggctggt cagcaccacg
     2521 cgcccgatgg ccaccatgtc catctgcttg atgatgttgc ggatgacggc gaacgcgtcc
     2581 tggcccacct tgccgtcggg cgcgatgtaa taaggacgga tcagatagag atcgtcgatc
     2641 tccgagcgcg gaacgaactt gtcgatctcg atggtccggg tggtgtcgag cgcgaccgcg
     2701 tcgagctcct cgtcggtgat ctcgacatat ttgcccttgt cgacctggta gcccttgacg
     2761 atctggtcct gcgtgacctc gtcgccggtg tcctcgtcca ccttgcggta gcggatgcgg
     2821 ttgcccgtct cgctgttgat ctggttgaag ctgatcttct cgcgctcgct ggtggcggga
     2881 aacagctgga tgggacagga cacgagagaa aggcgcagaa agcctttcca gtacgcacgc
     2941 ggggccatgg gccgctccta cacaacacct gcggaacaag tcatccggac tatgtactta
     3001 ttacgcgcgt atattacacc cgttccccgc cggatgtgtt cccagtccgt tccggaaaca
     3061 aaaaagcgag ccgcctccac cgaggcggcg tcgaggaacc caggctcgcg gaggagctta
     3121 cttgagctgg gtcgaaatgg tgtcgaacct cgaattgagg ctcgagccga tcgcattcac
     3181 gctggcaatg atgacaatcg aaatgcccgc ggcgatcagg ccgtattcga tagcggtagc
     3241 gcccgactca tccttcagga acgcaaaaac gctggacatg tgacacactc catgaggccc
     3301 gatacgacgg cacgatagcg gcacgccgtt aacaagattc tctcgcagtc ataaagaaac
     3361 tgcaatggta accaagtccc gcggtcgttt cgtatcccgg ccgggcaacc gcgccgcccg
     3421 gtcggaaaga agccgccgtc gccggcggct cccttgaaat ccagccacgt gtggacggct
     3481 tacttcaact gcgtcgaaat gctgttgaac ttgccgttga ggttggagcc gatcgcattg
     3541 accgtggcaa tgatcacaac cgagatgccg gcggcaatca ggccatactc aatcgcggtg
     3601 gcgcccgact cgtccttcag gaacgcataa agcttggaca tctgacgcac tccatgtttt
     3661 gcattttata caagcctcac agtaattcgg aactcttaag aaagactctg tgcgattggc
     3721 gaggctttgc gatctcgata ttccgaatcc cgacataaat ttttaccggc cgttatccat
     3781 gccggcgcgc gccacgcggc aaaccggcgt atcgcgggct ttttgcgggg acgggaacag
     3841 gtggctttat acttttgcta tgcgcgccaa attaaccgta gcgggttgcg cacgctgcgg
     3901 aatgaggagc atgcgacggt caaagtcaca aggcgccgcc ggttcaccga tctggcgatc
     3961 cgttctaacg attctttcta atcattcttg ggaatatttt gtgcgatacg ccacaacact
     4021 ccggtcggat cgacgatcac gaagtcgcgc atgccccacg gccggtccgt tggcggctcg
     4081 gccatgacgc catatgtcgt gaccacgttt tgagactcga cgtggcgcca ccaggcatcg
     4141 agatcctcca ccagcagatg catcatgaaa ttgccggcgt gctccttgtt gtagaaattc
     4201 tgcagcagga aactcgactc gccgtgacga aaataggcga ggtcgtccga ggaccaggcg
     4261 agagtgaatc cgaggtcctg ataaaaacgc ttggacagat cgaaatcccg ggccggcacg
     4321 aatgccttga tctcgacggt tgtcatgttg gtcatggcag gatgcctcgt gtcgattgag
     4381 caacgcctat ggtccaaaat cgctccttcg tggaacttcc agacacgatc gacgttttcg
     4441 ggcgggacgt tttcatgggt ggaggctcgg atggaccagc cgacggcacg gttcaaggac
     4501 cagttgttca attcacccaa tgaagtcagg attatggacc agctggccga gtggaatcgt
     4561 cagcatctgg acgcgcgata tgcttcggct cagctctata gccccagatc caagcgcttg
     4621 cgtgtcgtgg cccaacgtga attcgcgccg gcccttatcg gccaatttca tgacatgccc
     4681 cttacatcgg gaacgatgtg tgcccgcgcc gcgcgcctgc gaacgccgat cctggtccct
     4741 gacgtaaccg cggacagcga ctggactccc ttcctgagtt tctccgaggc tgccggattc
     4801 ggcggtgttc tttcgattcc gctgctttcg aaggcaggcg acctgatcgg cgtgacatcc
     4861 tgccattttt ccggtcatgc aaaaccgacc gagaaggaat tgaatttcgc gcgggtcagt
     4921 tgcgacttcg cgagcgacgc catcgtcgag ctccgccggc gccagcggca ataaatgcgc
     4981 gttag
//
LOCUS       DATDHO010000996         5520 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_491764, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000996 DATDHO010000000
VERSION     DATDHO010000996.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5520)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5520)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5520
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491764"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..395)
                     /locus_tag="VIY07_19520"
     CDS             complement(<1..395)
                     /locus_tag="VIY07_19520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle receptor subunit
                     alpha"
                     /protein_id="HEY6383983.1"
                     /translation="MNDSTQAGNWWKRMSEGLKRTSSSLGGAVTGLVTKRKLDAETIE
                     ELEHELVRADLGPDFAARIADALSEGRFEKSISPDEVKAELAGEIEKVLSPVARPLEV
                     TTQPFVILVAGVNGSGKTTTIGKLAARYRS"
     gene            422..1105
                     /locus_tag="VIY07_19525"
     CDS             422..1105
                     /locus_tag="VIY07_19525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pseudouridine synthase"
                     /protein_id="HEY6383984.1"
                     /translation="MTPEEMLARLLYRDGMMLVVDKPPGLPVHRGPKGGEAFEDFFDA
                     LRFGLPRPPALAHRLDRDTTGCLVLGRHRKALALLGGLFKQGKVGKCYWAVVEGGPGA
                     DDGRIDIPLAKRDDARGWWMKVDEHGLPSASTWKVMGRGSGLTWLALEPLTGRTHQLR
                     VHCAEMGWPIVGDNIYGSAPRTGGPALHLHSREVTVPISKNKPPVTVTAPLPAHMREL
                     LTRCGWSDI"
     gene            complement(1209..1832)
                     /locus_tag="VIY07_19530"
     CDS             complement(1209..1832)
                     /locus_tag="VIY07_19530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEY6383985.1"
                     /translation="MAYRDHLITTMEQLQSLYGEKLPTSVIKEIDHINDGYRKLIEAA
                     PFVAVATSGPEGLDCSPKGDAPGFVRILDDKTLAIPDRPGNNRIDSFRNIMRDPRIAL
                     LFLIPGIGETLRVNGRASISIDPDLMQSFAVGGKLPRSVLIIHIESIYFHCSKAIVRS
                     KLWEETTKIDRKSLPSTGTIIAELSNGKFGGEVYDREAPERIKAQLY"
     gene            complement(1846..3075)
                     /gene="mtaB"
                     /locus_tag="VIY07_19535"
     CDS             complement(1846..3075)
                     /gene="mtaB"
                     /locus_tag="VIY07_19535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HEY6383986.1"
                     /translation="MSVEVVTFGCRLNTFESEVIKREAASAGVDDAVVVNTCAVTAEA
                     VRQARQAIRRLKRNQPHARIVVTGCAAQTEADTFAAMPEVDRVIGNEEKFDPASWTTS
                     GKVAVSDIMAVKKMRPHVIESIEGRTRAFVQVQNGCDHRCTFCIIPFGRGNSRSLPIE
                     DVVAQARRLVVNGYREIVLTGVDITSYGQDLAGSPRIGTLVQRILRDVPELPRLRLSS
                     IDSVEADPALLDALADEPRLMPHLHLSLQAGDDLILRRMKRRHSRSDAIAFCEHVRRL
                     RPDIVFGADIIAGFPTESDTMFDRSLELVDECGLTQLHVFPFSPRPGTPAARMPQVNR
                     AVVKERAGRLREKGDAALRRHLDREIDTRRRVLAESRALGRTEQFIPVRLAAPVEPGV
                     ILDLTIMGHDGRQLMAA"
     gene            complement(3072..3947)
                     /gene="dapF"
                     /locus_tag="VIY07_19540"
     CDS             complement(3072..3947)
                     /gene="dapF"
                     /locus_tag="VIY07_19540"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEY6383987.1"
                     /translation="MGALANQAFVKMNGIGNEIVVVDMRTRGGKIEAEEARAAAAPEG
                     APYDQLMALYPPRTPGTDAFIRIYNSDGSEAGACGNGMRCVADLVAQKSGKTEFTFET
                     TAGILNCWREPDGLFTVDMGPPRFKWNEIPLAEEFRDTRAIELQIGPIDRPVLHSPSA
                     VSMGNPHAIFWVDDVNAHDLARCGPLLENHPIFPERANITLAHIVTRNHIVIRTWERG
                     AGLTKACGSAACAAAVAAARLRRTERKVKVTLPGGDLDINWREQDDHVLMTGPVQFEF
                     KGRFDPALFIKAGAK"
     gene            4071..4691
                     /locus_tag="VIY07_19545"
     CDS             4071..4691
                     /locus_tag="VIY07_19545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HEY6383988.1"
                     /translation="MSRFAPIVIALAFALAAGPASAQSPAQDKPGANQPPPAPPVAKP
                     SAPSPLQPGDAFGEQVTLPERTIVYMKGHTNWDNAFDTLVDVFKSLQEYLDKQDVKPS
                     GPAITIYTQTDDTGFSYQAGLPVVQTPKDAPKGDIAVGPMPSGKAIKFVHRGSYDAMD
                     STYEAITNYLDDKQLEAKDLFIEEYTTDPVKTAPDKLVINVFVPVK"
     gene            4691..5371
                     /locus_tag="VIY07_19550"
     CDS             4691..5371
                     /locus_tag="VIY07_19550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEY6383989.1"
                     /translation="MPVWRVLLVLLGASLTFAPLQAAEKTVTVTGEATVGVAPDAAII
                     RIGVSSQEKTAREAGEANARQMTSVLAAIKASGIAERDIQTSRLSLQPQYDPNKAGTA
                     RLTGFQATNQVTVRIRDIDSLPAVLDRAIGAGANEMSGIEFVVSEQSKLLDQARDDAI
                     ADARRKAELYAKAAGAKLGGVVSISEEGPAPPQPRPMQEMRAGAVPVAPGEQTLRAIV
                     SVSYELTH"
BASE COUNT         1066 a         1705 c         1690 g         1059 t
ORIGIN      
        1 gaacgatacc gggccgcaag cttgccgatc gtggtggttt ttccggaccc gttgacgccg
       61 gcgaccaaaa taacaaaagg ttgcgtcgtt acttccaatg gccgcgcaac cggcgacagg
      121 actttctcta tttcgccggc aagctcggcc ttcacctcgt caggcgaaat cgatttttcg
      181 aagcgtcctt cgctgagcgc gtcggcgatc cgcgcggcga agtcggggcc gagatcggcg
      241 cgcaccaatt catgttccag ttcctctatg gtctcggcat cgagtttgcg cttcgttacc
      301 agaccggtga ccgccccgcc gagcgacgac gaggtgcgtt tgagcccttc gctcatacgc
      361 ttccaccagt tgccggcctg cgtgctgtcg ttcatggcgt gcccgtgata gcggtttcgg
      421 catgacaccg gaagagatgc tcgcccgcct gctctaccgc gatggaatga tgctggtcgt
      481 cgacaaaccg ccgggcctgc cggtgcaccg cggtccgaag ggcggagagg ccttcgaaga
      541 cttcttcgac gctttgcgtt tcgggttgcc gcgcccgccg gcactggcgc accggctcga
      601 ccgcgacacc accggttgcc tggtgcttgg tcggcatcgc aaggcactgg cgctgcttgg
      661 cggtctgttc aagcaaggca aggtgggcaa atgctattgg gccgtggtcg agggaggacc
      721 tggcgccgac gacgggcgaa tcgacattcc ccttgcgaaa cgcgacgacg cgcggggctg
      781 gtggatgaag gtcgacgagc acggcctgcc gtcggccagc acgtggaagg tgatgggccg
      841 tgggtccggg cttacatggc tcgcgcttga gccgctgacc ggccgcacac atcaattgcg
      901 cgtccattgt gcggagatgg gttggcccat cgtgggagac aatatctatg ggagcgcacc
      961 gcgaacgggc ggtcctgcac ttcacctgca ttcccgcgag gtaaccgtgc cgatatcgaa
     1021 gaacaagccg ccggtcaccg taacggcgcc actacccgcg catatgcgcg aattgttgac
     1081 gcgctgcggg tggagtgaca tctaagccgt catggccggg cttgtcccgg ccatccacgt
     1141 ttttgttctt tgcaaagccg caaagacgtg gatgcccgcg acaggcgcgg gcatgacgtt
     1201 tttcttggct aatacagctg ggccttgatc cgctccggcg cctcgcgatc gtagacctcg
     1261 ccgccgaatt tcccgttgct caactcggca atgatggtgc cggttgaggg aaggctcttg
     1321 cggtcgatct tcgttgtttc ttcccagagc ttggagcgca caatcgcttt cgaacaatga
     1381 aaatagatgc tttcgatatg aatgatcagg acggagcgcg gcagtttgcc cccgaccgca
     1441 aagctttgca tcaggtcggg atcgatcgag atcgaagcgc ggccattcac gcgcagcgtt
     1501 tcgccgatgc cgggaatgag aaacaggagc gcaatgcgag gatcgcgcat gatgttccgg
     1561 aaactgtcga tgcgattgtt gcccggccga tcgggaatcg cgagcgtctt gtcgtcgagg
     1621 atccgcacga accccggcgc gtcgcctttc ggtgagcaat ccaggccttc aggccccgag
     1681 gtggcaacgg cgacaaacgg tgcggcttcg atcagcttgc gatacccatc attgatatgg
     1741 tcgatttcct tgatgaccga agtcggcagc ttctcgccat aaagcgactg cagctgctcc
     1801 atggtcgtga tcagatgatc gcggtatgcc atcgaaagcc ctcttttagg cggccatgag
     1861 ttgccggccg tcgtgcccca ttattgtaag atcgagaata acacctggct ctaccggcgc
     1921 ggcaagacgc acaggtatga attgctctgt tcgcccgagt gcacgcgact cagcgagcac
     1981 gcggcggcgg gtatcaatct cccgatcgag atggcgcctg agtgccgcgt cgcccttttc
     2041 gcgcaagcgc cctgcccgtt ccttgaccac ggcgcggttg acctggggca tgcgcgcggc
     2101 cggcgtgccg gggcgtggcg aaaacgggaa aacatgcagt tgcgtcagcc cgcactcgtc
     2161 gacgagctcg agcgagcggt caaacatggt atcactttcc gtcggaaatc ccgcgataat
     2221 atccgccccg aacacaatgt ccggacgcag gcgccgcacg tgttcgcaaa aggcgatcgc
     2281 atcgctgcgt gaatggcgcc gcttcatgcg cctgaggata agatcgtctc ccgcctgtaa
     2341 cgatagatgc aggtgcggca tcagccgcgg ttcgtcggcc aacgcatcga gcagagcggg
     2401 atcggcttct accgaatcga tcgaggacag cctgagtcgc ggcagttccg gcacgtccct
     2461 caggatgcgc tggaccaggg tgccgatgcg aggcgagcca gcgagatcct ggccgtagct
     2521 ggtgatgtcg acacccgtca gcacgatttc tcgatagccg ttgaccacca gccgccgcgc
     2581 ctgcgccacg acatcttcga tcggcaggga acgagagttg ccccgaccga acggaataat
     2641 gcaaaacgtg caacgatgat cgcagccgtt ctggacctgc acgaaggcac gggtgcgtcc
     2701 ctcgatgctt tcgattacgt gcggccgcat tttcttgacc gccataatgt cggacacggc
     2761 gacctttccg cttgtcgtcc acgacgcggg gtcgaacttt tcttcgttac cgatgacccg
     2821 atcgacttcc ggcatcgctg caaaagtatc cgcctcggtc tgcgccgcac agccggtgac
     2881 gacgatgcgc gcgtgtggct ggttgcgctt cagccggcgg atggcttgcc tggcctggcg
     2941 aacggcttcc gcggtcactg cgcatgtgtt gacgacgacg gcatcatcga cgccggcgga
     3001 ggctgcctcg cgcttgatga cttcggattc gaaggtgttc agccggcagc cgaaagtaac
     3061 gacctcgaca ctcattttgc gcccgccttg ataaacagcg caggatcgaa gcgccctttg
     3121 aactcgaatt gcaccgggcc ggtcatcaga acgtgatcgt cctgttcacg ccagttgatg
     3181 tcgaggtcgc caccgggcag cgtcaccttc accttccgct cggtgcgcct gagccgcgct
     3241 gcagcgaccg cagccgcgca agcggctgag ccgcaggcct tggtcaggcc ggcgccccgc
     3301 tcccacgttc gaatgacaat gtgattgcgg gtgacaatgt gcgcgagcgt gatattggcc
     3361 cgctcgggaa agatcggatg attctcgagc aacgggccgc atcgggcaag gtcatgcgca
     3421 ttcacgtcat cgacccagaa aatggcgtgg ggattgccca tgctaactgc cgaaggcgag
     3481 tgcagtacag gcctgtcgat cggaccaatc tgcagttcta tcgcacgcgt gtcacggaat
     3541 tcttccgcca gtggaatctc gttccattta aagcgcggcg gccccatatc gacggtgaac
     3601 aaaccgtcag gttccctcca gcaattgaga atgccggccg tcgtttcgaa cgtgaactcg
     3661 gtcttcccac tcttctgcgc gaccaggtcg gcgacacatc gcatgccatt tccgcaggcg
     3721 ccggcctccg atccgtcact gttatagatg cggatgaatg catccgtgcc gggggtgcgc
     3781 ggggggtaaa gtgccatcag ctgatcatac ggcgcccctt ccggggccgc ggcagcgcgc
     3841 gcctcctcag cctcgatttt gccgccacga gtccgcatgt cgacaacgac gatttcgttg
     3901 ccgattccgt tcatcttgac aaaagcctga ttggcgagcg cgcccatgcc attttgcccg
     3961 ggtttcgccc ggtttatatg gcgaatacac gcgaattgac cagtggccat gctagggttc
     4021 gtaatggtgc tgccgaaatg ccggatcgcc gcaatcgacg gagaacagtg atgtccaggt
     4081 ttgccccgat cgttatcgcg ttggcgtttg ccctcgccgc cggcccggcc tcggcacaaa
     4141 gcccggcgca ggataagccc ggcgcaaatc agccgcctcc ggcacctccg gtcgcaaagc
     4201 cctccgcgcc gtcgcccctg cagccagggg atgcttttgg cgagcaggtg acgctgccgg
     4261 agcgaacgat tgtttatatg aaaggccaca ccaattggga caacgccttc gacacgttgg
     4321 tggatgtctt caaatccctg caggaatatc tggacaagca ggacgtaaag ccatccggtc
     4381 ccgccatcac gatctacacc cagaccgacg acaccggatt ctcgtatcaa gcgggcctgc
     4441 cagtcgtgca aacgcccaag gacgcaccaa agggcgacat cgccgtcggg ccgatgcctt
     4501 ccggcaaagc gatcaagttt gtccatcgcg gatcctatga tgcgatggat tcaacctatg
     4561 aggcgatcac caactatctc gacgacaagc aactcgaagc gaaagacctg ttcatcgagg
     4621 aatacacaac ggatcccgtg aagaccgcac ccgacaagct cgtgatcaat gtatttgtgc
     4681 cggtgaagtg atgcccgtct ggcgcgtgct gttggttttg ctcggtgctt cgctcacgtt
     4741 tgcgcccctg caggccgcgg agaagacggt cacggtgacc ggcgaggcaa cggtcggcgt
     4801 cgcgcccgat gccgcgataa ttcgcatcgg cgtcagcagc caggaaaaaa ctgcgcggga
     4861 ggcgggcgaa gcaaacgcaa ggcaaatgac gtcagtgctc gccgccatca aggcaagcgg
     4921 catcgccgag cgcgacattc agacttcgcg cctgtcgctt caaccgcagt atgatccgaa
     4981 caaagctggg accgcgcggc tgaccggctt ccaggcaacc aatcaggtca cagtcagaat
     5041 tcgcgatatc gattcgctgc ccgcggtgct cgatcgcgcc atcggcgcgg gggcgaacga
     5101 aatgtcaggc attgaattcg tggtgtcgga gcagtcgaag ctgctcgacc aggcgcgcga
     5161 tgatgctatc gccgatgcgc gccgcaaggc cgagctttat gcaaaggccg ccggagcgaa
     5221 actcggaggc gtggtctcga tcagcgaaga gggtcctgcc ccaccgcagc cacggccaat
     5281 gcaagagatg cgcgccggcg cagttccggt cgctccggga gagcagacac tgagggcgat
     5341 cgtcagcgtc agttacgagt tgacgcactg aatccgcacg ccttgactta gccacccccc
     5401 aaccttaggt tccgcgcgtt cttgatagag acgggaaatt caaccccgcc gcccggtcca
     5461 tgagaggccg gaggctaccg cccgacagcg cgatgcgccc tcgggcgcaa aggtcctttc
//
LOCUS       DATDHO010000997         5828 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_491767, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000997 DATDHO010000000
VERSION     DATDHO010000997.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 5828)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5828)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5828
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_491767"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2883
                     /locus_tag="VIY07_19555"
     CDS             <1..2883
                     /locus_tag="VIY07_19555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing hybrid sensor histidine
                     kinase/response regulator"
                     /protein_id="HEY6383990.1"
                     /translation="GIFVTFWMFDGPVTLFKEAMQHPATAAIFTREPRIDTLLAMTLL
                     SFVAIILLPRQFHVAVVENNDEKEIKRAVWLFPLYLVLINLFVVPIALAGLLTFPTGK
                     IDSDMFVLALPLESGSNFFTIAAFVGGLSAATAMVIVESVALSIMVSNDLIMPFVLQR
                     RGALIRGRENIGSLLLTVRRLAIFAILLLAYVYYRSAGEAQLASIGLLSFAAIAQLAP
                     AFFGGLLWRRATAAGAIAGMTAGFLVWSYTLLLPTLSDIGVIGERILTHGPAGLSMLR
                     PQHLFGLDLPPLVHGVTWSLLLNIIFYVGFSLRREPSPIERLQANTFVPSDFTPIAPS
                     FRLWRSSVTVEELTSTVARYLGEERTRSAFESFASAQRISMEPKDDADFRLIRYAEHT
                     LASAIGGASSRLVLSLLLRKRTVSTKAALKLLDDANAAIQYNREILQTALDHVRQGIA
                     VFDKELQLICWNRQFGEILDLPPSLTRAGIGLADILRFNGKRADVPPEAVEAFVHDRL
                     DHYVSGSEPFLERFAQGLVIEVRANRMPDGGIVTTFTDITASVEAAEALERANETLER
                     RVHERTEQLTRLNAALELAKGEADAANISKTKFLAAASHDILQPLNAARLYVTSLIER
                     GGREDRRLVDNIDASLEAVEEIFGALLDISRLDTGALRPEFASFRIDELMRQIEVEFA
                     PLASAKGLDLTFVPCGLVVRSDRRLLRRLIQNLVSNAIKYTPEGRVLIGCRRRGDHLR
                     IDVYDTGVGIPQSRWRDIFVEFHRLDQGAKIARGLGLGLSIVERLARVLDCTIDLKSE
                     IGRGSHFMVTVARSRGAPVELPAREETRIDPGQLAGITALCIDNEPSVLDGMETLLRG
                     WGCEVIKAPDLRVAIESVSASALTPNGLLVDYHLDQGNGIEAIVQLRRRYGDLPAILI
                     TADRSPAVREQARAQGVQVLHKPIKPAALRALLAQWRMMLATAAAE"
     gene            complement(2887..3564)
                     /locus_tag="VIY07_19560"
     CDS             complement(2887..3564)
                     /locus_tag="VIY07_19560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY6383991.1"
                     /translation="MSDALQYRLVIADDHPLFRGALREAVTGLLEQVDIAEAGTYDEL
                     VELLERNGDVDLVLLDLAMPGVRGFSGLMYMRAQYPGVPVIVVSANDDPAAIRRCMDF
                     GASGFIPKTLGVDAMRTAISRILGGDVWTPPDVDLTGESDAASAALMARMATLTPQQV
                     RVLMMLSEGLLNKQIAFQLGVSEATVKAHVSAILQKLGVESRTQAVIAAAKIESGQWP
                     QGIVAEG"
     gene            3909..5549
                     /locus_tag="VIY07_19565"
     CDS             3909..5549
                     /locus_tag="VIY07_19565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEY6383992.1"
                     /translation="MSTVAGTSARASGMTKDEKFVIFASSLGTVFEWYDFYLYATLAP
                     FFASLFFPPGNDTAALLSAFATYAAGFLVRPFGALIFGRIGDLVGRKYTFLVTIVVMG
                     AATFLVGLLPTFASIGWIAPIALVTLRLCQGLALGGEYGGAATYVAEHSRPNERGYTT
                     SYIQTTATLGFFLALVVIGFCRAYMDAKVFAEWGWRIPFWVSLILLVFSVYIRLKLNE
                     TPIFQRMKEEGKGSTAPLTESFFHYPNNKYVLLALLGATAGQGVVWYTGQFYALFFLL
                     ITLKLELISAYILIGLSLIIGTPFFIFFGWLSDRIGRLKIILAGCAIAALTYFPLFQG
                     LTHFVNPDLEAFQKANPITVSADQSTCNFHIFVGPWSKFTECDRAQDFLTKLGLSFKT
                     VHAPGSKSVDVDIGGTKVQGWDNAKWTAALAAKNYPKAADLKKVNWVMAELILVIMVI
                     YVTMVYGPIAAFLVEMFPTKIRYTSMSLPYHIGNGWFGGMLPLLATAVVAATGDIYAG
                     LWYPIIVAVMTLIVGAVFLRDTKDVDIRTGSGVAIQKG"
     gene            complement(5621..>5828)
                     /locus_tag="VIY07_19570"
     CDS             complement(5621..>5828)
                     /locus_tag="VIY07_19570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="YjbQ family protein"
                     /protein_id="HEY6383993.1"
                     /translation="ESAPWVHDVEGPDDMPAHVKAMLNGVSLHIPVAAGKLGLGTWQG
                     IYLVEHRRRPHSREVMLQYIGSRK"
BASE COUNT         1064 a         1813 c         1700 g         1251 t
ORIGIN      
        1 ggaatcttcg tcacgttctg gatgttcgat ggcccggtta cgctgttcaa agaagcgatg
       61 caacaccctg cgaccgccgc gatcttcacc cgagaaccac gcatcgacac cttgcttgcc
      121 atgacgctgc tgtcgttcgt ggcgatcatc ctgctgccgc ggcaattcca tgtcgccgtg
      181 gtcgaaaaca acgacgaaaa agagatcaag cgcgctgtct ggctgtttcc tctgtatctc
      241 gtcctgatca acctgtttgt ggtgccaatc gcgcttgcag gcctgttgac ttttccgacc
      301 ggaaaaatcg acagcgacat gtttgtgctc gccctgccgc tcgaaagcgg ctccaatttc
      361 ttcaccatcg cggcgtttgt aggcggcctg tcggccgcga ccgcgatggt gatcgttgaa
      421 tcggtcgcgc tttcgatcat ggtttcgaat gatctgatca tgccgttcgt gctgcagcgg
      481 cgtggggcgc tgatccgggg ccgcgaaaat atcggttcgc tgcttttgac cgtgcggcgg
      541 ctggcgatct ttgcgatcct ccttcttgcc tacgtgtact atcgctcggc aggcgaagcg
      601 cagctggctt cgatcggcct cctctcgttc gcggccattg cacaacttgc gcccgctttc
      661 ttcggcggac tcctgtggcg tcgcgcgaca gcggccggag ccatcgccgg catgaccgcc
      721 ggttttttgg tctggagcta tacccttctt ctcccaacct tgtccgacat cggcgtgatc
      781 ggggagcgca tcctcaccca cgggccggcg ggcctcagca tgttgcggcc gcagcacctg
      841 ttcggcctcg atttgcctcc attggtgcac ggagtcacct ggagccttct gctgaatatt
      901 attttctacg tcggtttctc gctgcggcgg gagccttcgc cgatagagcg cctgcaggcc
      961 aacacctttg tgccgtccga tttcacaccg atcgcgccaa gcttccgttt gtggcgatcc
     1021 tcggtgacgg tagaggaact cacgagcacc gttgcgcggt atcttggcga ggaacgcacg
     1081 cgctccgcct ttgaaagctt tgcgagcgcg cagcgcatca gcatggagcc gaaagacgac
     1141 gccgacttcc ggttgattcg ctatgccgag catacgcttg cgtcagcaat tggcggcgcc
     1201 tcctcgcggc tggtcttgtc gctgctcttg cgcaagcgca cggtttcgac caaggccgca
     1261 ttaaaattac tggacgatgc caatgcggct attcagtaca accgcgaaat tctgcagacc
     1321 gcgctggatc acgtgcgtca ggggatcgct gtattcgaca aggaattgca gctgatctgc
     1381 tggaacaggc agttcggaga aattctggat ctgccgccga gcctgacccg tgctggtatc
     1441 ggattggccg acatcctgcg tttcaacggc aagcgcgccg acgtccctcc ggaagctgtc
     1501 gaagcattcg ttcacgaccg actcgaccac tacgtttcgg gcagcgagcc gttcctggaa
     1561 cggttcgcac agggtcttgt gattgaggtg cgcgccaacc gcatgccgga tggcggcatc
     1621 gtgacgacct tcacggatat tacagcgagc gtcgaagcgg cggaggcgct ggagcgcgcc
     1681 aacgaaacgc tggaacggcg agtccacgaa cgcaccgagc agctcacccg gctcaatgcg
     1741 gcgctcgaac tggcgaaagg cgaggccgac gccgccaaca tttccaagac caagtttctc
     1801 gcggcggcaa gccacgacat cctccagcca ctcaatgctg cccgactgta tgtcaccagc
     1861 ctgattgaac gcggcggccg cgaggatcgg cgcctggttg acaatatcga tgcgtcactc
     1921 gaggcggtcg aggagatttt cggcgccttg ctcgatatct cgcggcttga caccggcgct
     1981 ttgcgccccg agtttgccag cttccgcatc gatgagttga tgcgtcagat cgaggtcgaa
     2041 ttcgccccac tcgcctccgc caagggactg gaccttacct tcgtgccatg cgggctcgtg
     2101 gtgcgatccg atcgtcgcct gctacggcgc ctgatccaga atctcgtttc caacgccatc
     2161 aagtatacgc cggaggggcg cgttctcatt ggatgccggc ggcgcggcga ccatctgcgc
     2221 attgacgttt acgacaccgg cgtcggcatt ccgcaatcca ggtggcgcga catatttgtc
     2281 gaattccatc ggctcgatca gggggcaaag atcgcgcgtg gcttgggact tggcctgtct
     2341 atcgtcgagc gcctggcccg cgtgctggac tgcacgatcg atctcaaatc cgaaataggc
     2401 cgcggctcgc atttcatggt gaccgtggcg cgctcgaggg gagcgccggt cgagctgccg
     2461 gcacgcgagg aaacccgcat cgatcccgga cagcttgccg gtatcaccgc gctttgcatc
     2521 gacaacgagc cgtcggtgct tgacggcatg gaaaccctgc ttcgcggctg gggctgtgaa
     2581 gtcatcaagg cacccgacct gagggttgcc atcgagtcag tttccgccag cgcgctaacc
     2641 cctaatgggt tgctggtcga ttaccatctc gaccagggca atggcatcga ggcgattgtt
     2701 cagcttcgcc gccgctatgg cgatctcccc gcaatcctga tcaccgccga tcgctccccc
     2761 gcggtgcgag agcaggcgcg cgcgcagggc gttcaggtct tgcacaagcc gataaagcca
     2821 gctgccctgc gtgcgctgct ggcgcaatgg cgcatgatgc tggcaaccgc agcggcggaa
     2881 tagcgatcag ccttcggcaa cgatgccttg cggccattgc ccggattcga tcttcgcggc
     2941 ggcgatgacg gcctgcgtcc ggctctcgac acccagcttc tgcaggattg cggacacgtg
     3001 cgctttaaca gtcgcctccg agacaccgag ttgaaaggca atctgcttgt tcagaagtcc
     3061 ttccgacagc atcatcagca cgcgcacctg ttgcggcgtt agcgtcgcca ttcgtgccat
     3121 caacgcggcc gaagccgcat ccgattcgcc ggtgagatcg acatcgggtg gcgtccaaac
     3181 gtcaccgccg agaatgcgtg agatggctgt gcgcatcgcg tcaacgccca gtgtcttcgg
     3241 aatgaacccg gaagccccga agtccatgca tcggcggatc gccgccgggt cgtcattggc
     3301 agacacgacg atcaccggga cgccaggata ttgggcacgc atgtacatga ggccggagaa
     3361 cccgcgaacc cctggcatgg cgagatcgag caagacaaga tcgacgtcgc cattacgctc
     3421 gagcagctcg acaagctcgt cgtaggtgcc cgcctcggcg atatccacct gctccaacag
     3481 gccggtgaca gcttcgcgca aggcgccgcg aaacaacggg tgatcgtcgg caatgaccag
     3541 ccgatactgc aaggcgtcac tcaaaccggc acattcctac gaatttgttg gcggcgcggc
     3601 cagcgccgca tcgtttcgct cggtacccgc tctaatctat gttcctcccc tccctctttg
     3661 agtgcaagcc tttcaccgca cgatgaaaat tgccatggcg gctccaggtt gcagtgcaaa
     3721 aaacctttga taaatccgca ctttaggaag ccggcctcgt cgaaagtcga attgggcggc
     3781 ttgagcggcc ggactagagt tctgacaacc accgccagcg ggggcgcagg atcggtcggc
     3841 ccgatcgaac ttcgtttcct cgtcaacagc agcgggatgg ttggaacaat aacaccaggg
     3901 gaatcatgat gagcacagtg gctggtactt ctgctcgtgc cagtggaatg acgaaggacg
     3961 aaaaattcgt catcttcgca tcttcgcttg gcacggtttt cgagtggtat gacttctatc
     4021 tttacgcgac actcgctccg ttctttgctt cgctattctt tccgcccggc aacgacacag
     4081 cagctttgct ttctgccttt gccacttacg ccgctggctt tctcgttcgt ccgttcggtg
     4141 cgctcatctt cggccgcatc ggcgacctcg tgggacgcaa gtacaccttc cttgtcacca
     4201 tcgttgtgat gggcgccgcg accttcctgg tcggtctcct gccaacattt gcaagcatcg
     4261 gctggatcgc gcctattgcg ctcgtgacat tgcgcctgtg ccagggcctg gcactgggcg
     4321 gcgaatatgg tggtgcggcg acttatgtcg ccgaacattc gcgtcctaac gaacgcggct
     4381 acactacgag ttacatccag accaccgcca cgttgggatt cttcctggca ctggtcgtta
     4441 tcggcttctg tcgggcctac atggacgcca aggtcttcgc cgaatggggc tggcgcattc
     4501 cgttctgggt gtcgctgatt ctgctggtct tctcggtcta tatccggctc aagctgaacg
     4561 agacgccgat cttccagcgc atgaaggaag aagggaaagg ttcgacggca ccactgaccg
     4621 agagcttctt ccactatcct aacaacaaat acgtgctgct cgcgctgctc ggtgcgacgg
     4681 caggacaagg tgtggtgtgg tacacgggtc agttctacgc cctgttcttc ctcctcatca
     4741 cgctgaagct tgaactgatc tccgcgtaca tcctgatcgg cctgtcgctg atcatcggca
     4801 cgccgttctt catcttcttt ggatggttgt ccgaccgcat tggccggcta aagatcattc
     4861 tggccgggtg tgcgatcgcg gcgctcacat acttcccgct gttccagggt ttgacccact
     4921 tcgtcaatcc ggacctggaa gccttccaga aggctaaccc gatcacggtc tctgccgacc
     4981 agtcgacatg caacttccac atcttcgtcg gtccttggtc gaagttcact gaatgcgacc
     5041 gggcgcagga cttcctgacc aagcttggat tgtcgttcaa gacagtccat gcacccggat
     5101 ccaagtcggt cgatgtggac atcggcggca ccaaggtgca gggctgggat aatgccaagt
     5161 ggaccgcagc ccttgccgcc aagaactacc caaaggcggc cgacctgaag aaagtcaact
     5221 gggtgatggc cgaactcatc ctcgtcatca tggtgatcta cgtgacgatg gtgtacggcc
     5281 cgatcgcggc gttcctggtc gaaatgttcc cgaccaagat ccgctacacg tcgatgtcac
     5341 tgccgtatca catcggcaat ggctggttcg gcggaatgct gcctctgctg gccaccgccg
     5401 tggtggcggc gacaggcgat atctacgccg ggctctggta cccgatcatc gttgcggtga
     5461 tgacgctcat cgtcggcgcg gtgttcctgc gcgataccaa ggacgtggac atccggaccg
     5521 gttccggtgt cgcgatccaa aaagggtgat tgctggagac cggcggcgaa atatcgccgc
     5581 cggtctttct tcgcgaacgc cccgcaacgc ggggcgtttt tcatttccgg ctgccgatat
     5641 actggagcat cacctcccgg ctgtgcggcc gacggcggtg ctcgaccagg tagatgccct
     5701 gccaggtgcc gaggccaagt ttgccggcag caaccgggat gtgcagcgac actccgttca
     5761 gcatcgcttt gacatgcgcc ggcatatcat ccggcccttc cacgtcatgc acccagggcg
     5821 cgctttcc
//
LOCUS       DATDHO010000998         4682 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_492002, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000998 DATDHO010000000
VERSION     DATDHO010000998.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4682)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4682)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4682
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492002"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..898)
                     /locus_tag="VIY07_19575"
     CDS             complement(<1..898)
                     /locus_tag="VIY07_19575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012631247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383994.1"
                     /translation="MERVVDPLAKQPSALRTQSETIGFVVMVAALIVAPFVTYPLFLM
                     QAMCFALFACAFNLLIGYVGLLSFGQALYFGWASYLSAHSAKVWGFSPELAILTGTAT
                     AAVCGVIAGSLAIRRQGIYFAMITLALAQMMFFFALQAKFTGGEDGIQAVPRGFLFGI
                     VDLRNEMAMYAVVLIIFLAGFLFIYRIIHSPFGEVLKAIRENETRAISLGYKTDRYKL
                     VAFVLSATLAGVAGATKAIVLQLASLTDVNWPMSGEVVLMTLVGGLGTIFGPVVGAFV
                     ILVMQFKLAPIGEWVLVIQGAIF"
     gene            complement(898..1785)
                     /locus_tag="VIY07_19580"
     CDS             complement(898..1785)
                     /locus_tag="VIY07_19580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008936608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HEY6383995.1"
                     /translation="MFEIFGIPSTALFGQLLIGLINGSFYALLSLGLAVIFGMLNIIN
                     FSHGAQYMMGAFTAYLILQYSGLGYWPALILAPIIVGITGIIVERLFLQRLYKLDHLY
                     GLLLTFGLALIFEGVARNYFGSAGLPYTVPESLRGGQNLGFMFLPNYRAWVIGASLGV
                     CLATWFVIERTRLGAYLRAATENPALVRAFGINVPRMITLTYGFGVALAAFAGVMAAP
                     IYNVSPQMGAELIIVVFAVVVIGGMGSILGAIVTGFGLGVIEGLTKVFFPEASNTVIF
                     VIMAIVLLVRPAGLFGRRA"
     gene            complement(1841..3052)
                     /locus_tag="VIY07_19585"
     CDS             complement(1841..3052)
                     /locus_tag="VIY07_19585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383996.1"
                     /translation="MRRTLGLAALAAALACGGASAQQVNVKIGVLSDMSSLYADIGGP
                     GSVTAAKLAIADFTKDNPNVKVELISGDHQNKPDIGSQLANQWFDVDKVDMIIDTPNS
                     GVALAVSQITNTKNKVFIVSGAAASDLTGPKCNANTIHWTYDTWMLANGTGNALVKTG
                     GDSWFFLTADYAFGHALERDTMAAVEKAGGKVLGKVRHPLNTNDFSSFLLQAQSSKAK
                     IIGLANAGGDTINSIKQGAEFGIVKGGQKFAGLLVFASDVNAMGLQTAQGLTLTETWY
                     WDMNDANRAWTKRWQAERGAAGKFPTMVQAGVYSGLTHYLKAVAAVKSAADGKAVVAQ
                     MKQTPTDDPLFGKGTIRPDGRKVHPAYLVEVKAPSESKYPGDFYHVRATIPADEAFRP
                     LKEGNCPLVSG"
     gene            complement(3086..4285)
                     /locus_tag="VIY07_19590"
     CDS             complement(3086..4285)
                     /locus_tag="VIY07_19590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEY6383997.1"
                     /translation="MSQAALAAILACGTANAQQLNVKIGVLTDMSSLYADVTGPGALV
                     AAKMAAADFMKDNPNVKVEVIGGDHQNKADIGSQIANQWYDVDKVDLIVDVPNSGVAL
                     AISQISSQKNKVFVGSGPATSDLTGAKCNANTVHWTYDTWMLANGTGKAIVKTGGDTW
                     FFLTSDYAFGHALERDTAAVVEANGGKVLGKVRHPINTNDFSSFLLQAQSSKAKVIGL
                     ANAGGDTINSIKQAAEFGIVKGGQSLAGLLVFASDVNALGLNTAQGLVFTETWYWDMN
                     DANRAWTKRWQSERNAAGKVPTMNQAGVYAGTLHYLKAVSALKSAADGKAVVAKMKEL
                     PTDDPLFGKGTIRADGRKLHPAYLFEVKKPEESKYPGDFYKLRATIPADEAFRPLKEG
                     NCPLVSG"
     gene            complement(4333..>4682)
                     /locus_tag="VIY07_19595"
     CDS             complement(4333..>4682)
                     /locus_tag="VIY07_19595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEY6383998.1"
                     /translation="FPNLKERLGSSQGTKLSGGEQQMLAIGRILRTGARLLLLDEPTE
                     GLAPVIIQQIGKTIRALKEQGFTILLVEQNFRFASTVADRYYVMEHGRIIDQFANDEL
                     DANVDKLHDYLGV"
BASE COUNT         1012 a         1372 c         1333 g          965 t
ORIGIN      
        1 cgaaaatcgc gccttgtatg accagaaccc attcaccgat cggagcaagc ttgaactgca
       61 tgacgaggat cacgaatgcg ccgacgaccg gtccaaagat cgtaccaaga ccgccgacca
      121 acgtcatcag cacaacttca cccgacatgg gccagttcac gtcggtgagc gaagccaatt
      181 gcagcacaat ggctttggtg gcgcctgcaa ccccagcgag cgtcgctgac agcacaaagg
      241 cgaccaactt gtatcggtcc gttttgtagc ccagtgagat tgcgcgtgtt tcgttctctc
      301 gtatggcctt aagaacttcc ccaaatggcg aatggataat ccggtaaatg aacagaaagc
      361 ccgcaagaaa aatgatcagc acgacggcgt acatcgccat ctcgttccta agatcgacaa
      421 ttccaaacag gaatccacgc ggcaccgcct ggatgccatc ttccccgccg gtgaatttcg
      481 cctgcagggc aaagaaaaac atcatctgcg caagggcaag cgtgatcatc gcgaagtaga
      541 tgccctggcg gcgaattgcc aacgagccgg cgataacgcc gcagacggca gcggttgccg
      601 tgccggtcag gatcgcaagt tctggcgaaa atccccacac tttcgccgaa tgggctgaga
      661 ggtagctcgc ccagccgaaa taaagcgctt gtccaaatga caacagaccg acatatccga
      721 tcaacaaatt gaaggcacag gcaaagagcg caaagcacat cgcctgcatg agaaaaagcg
      781 gataggtcac gaatggcgcg acgatcagtg cagcaaccat gacgacaaag ccgatggtct
      841 cgctttgagt gcgaagcgca gagggttgct tggcgagggg atcgacgact cgttccatca
      901 cgccctccgt ccgaacaggc cggccggacg caccagcagg acaatcgcca taattacgaa
      961 gatcacggtg ttcgaggcct cagggaagaa aaccttggtc aggccctcga tcactccaag
     1021 accgaatccg gtcacgatcg ctcccaaaat cgatcccatt ccgccgatca caacgacagc
     1081 gaacaccacg atgatcagct cggcgcccat ctggggcgag acattgtata tcggcgctgc
     1141 cattaccccg gcgaaggcgg caagtgccac gccaaaacca taggtgagcg tgatcatccg
     1201 cggcacgttg atgccgaagg cccgtacaag cgcgggattc tcggtggcgg cgcgcaagta
     1261 ggccccgagc cgcgtccgtt cgataacgaa ccaggtcgcg agacagaccc ccagcgaggc
     1321 gccgatgacc caggcgcggt agttgggcag aaacatgaat ccgaggttct gtccgccgcg
     1381 cagggattcc ggcaccgtgt aaggcagacc ggcagagccg aaataattgc gcgcaacgcc
     1441 ctcgaaaatc agcgccagtc caaacgtgag caacaacccg tacaagtggt cgagcttgta
     1501 tagtctctgc aagaagagac gctcgacgat gatgcctgtg ataccgacga tgataggagc
     1561 aagaatgagt gcaggccaat acccgagacc cgaatactgc agaataagat aggcagtaaa
     1621 agcgcccatc atgtactggg cgccgtgact gaaattaatg atgttgagca tgccgaatat
     1681 gacggcgagt cccaggctca gcagcgcata aaacgatcca ttgatcaggc cgatcagtag
     1741 ctggccgaac agcgcggtcg atgggatgcc gaagatttcg aacatgcgtc accgcaatgt
     1801 cgggggcaga cgtttgtctg cccccgcgtt ttgttgatga tcaaccgctg accagcgggc
     1861 agttaccttc cttaagcggt cggaaggctt catccgccgg gatggtggcc cgcacgtggt
     1921 agaagtcgcc gggatatttg gactccgatg gcgccttcac ctcgaccaga taagctggat
     1981 gcaccttgcg gccatcgggg cggattgtgc ccttgccgaa gagcgggtca tcggtcgggg
     2041 tctgcttcat ttgcgcaacg actgccttgc cgtcggccgc gctcttcacg gccgccaccg
     2101 ccttcagata gtgcgtaagc cctgaataca cgccggcctg aaccatcgtc gggaacttgc
     2161 ccgcagcgcc ccgttctgct tgccagcgtt tggtccaagc ccggttggcg tcgttcatgt
     2221 cccagtacca ggtttccgtg agggtcaatc cctgcgccgt ttgcaagccc atcgcgttga
     2281 cgtcgctcgc gaacaccaaa aggccggcaa acttctgacc acccttgacg atgccgaatt
     2341 cggcgccctg cttgatcgag ttgatggtat cgccgccggc gttagcaagc ccgatgatct
     2401 tggccttgga ggactgcgct tgcagcagga acgacgagaa atcgttggta ttgagcgggt
     2461 gacgcacttt gccgaggacc ttgccgccgg ctttttcaac cgctgccatc gtgtcgcgct
     2521 cgagcgcgtg accgaaggca tagtccgccg tcaggaagaa ccaggaatcg ccacccgttt
     2581 tcaccagggc attgccggtg ccattggcga gcatccaggt atcgtaggtc cagtggattg
     2641 tgttggcgtt gcatttcgga ccagtgagat ccgaggccgc tgcgcctgac acgatgaaga
     2701 ccttattctt ggtattcgtg atctggctga ctgccagcgc gacaccggaa ttcggcgtgt
     2761 cgatgatcat gtcgaccttg tcgacgtcaa accattggtt ggcgagctgc gaaccgatat
     2821 ccggcttgtt ttggtgatcg ccgctgatca gctcgacctt cacattcgga ttgtccttgg
     2881 tgaagtcggc gatcgccagc ttggcggcgg tgaccgagcc cgggccgccg atgtcggcat
     2941 agaggctcga catgtcgcta agcacaccga ttttcacgtt gacctgctgg gcgctagctc
     3001 cgccgcaggc aagggcggca gcgagcgccg ccagtcctaa agttcttctc ataagtgatc
     3061 ctccgttgtg ttttgggtat tcggtctagc cgctcacgag cggacaattg ccttccttca
     3121 gcggacgaaa agcttcatcg gcgggaatcg tcgcacgtag cttgtagaaa tcacccggat
     3181 atttcgactc ctcgggcttc ttgacttcga agaggtaggc cggatgcagt ttgcggccgt
     3241 cggcgcggat cgttcccttg ccgaatagcg gatcgtcggt cggcagttcc ttcatctttg
     3301 cgaccacggc cttgccgtcg gcggcactct tgagggcact caccgccttc agataatgca
     3361 aggtacctgc atatacgccg gcctggttca tggtcggcac tttgccagct gcgttgcgtt
     3421 cgctctgcca gcgctttgtc caggcgcgat tggcatcgtt catgtcccag taccaggttt
     3481 ccgtgaacac caggccttgc gcagtattca gtccgagtgc gttcacatcg ctggcaaaca
     3541 ccaacagacc ggccagactt tgcccgccct tcacgatgcc gaattcggct gcttgcttga
     3601 tcgagttgat ggtgtcgccg ccggcattgg cgagaccgat caccttcgcc tttgatgact
     3661 gtgcctgcaa caggaacgac gagaaatcat tcgtattgat cggatggcgc accttgccga
     3721 ggacttttcc gccatttgcc tctacgacag ccgcggtgtc gcgctcaagc gcatggccaa
     3781 aggcataatc ggacgtgagg aagaaccatg tgtcgccgcc ggtcttcaca atcgccttgc
     3841 cggtgccgtt tgccagcatc caggtgtcat aggtccagtg cacggtgttg gcattgcact
     3901 tcgcaccggt caggtcggaa gtcgcagggc ctgagccaac gaacactttg ttcttctgtg
     3961 agctgatctg acttatcgcg agcgcgacac cggaattcgg cacgtctacg atcaagtcga
     4021 ccttgtcaac gtcgtaccac tggttcgcaa tttgggatcc gatgtcggcc ttgttctgat
     4081 ggtcgccgcc gatcacctca acctttacat tgggattatc cttcatgaag tcggcagccg
     4141 ccattttcgc cgcaacaagc gcgccggggc ccgtcacgtc ggcataaagg ctcgacatgt
     4201 cggtaagcac gccgatcttg acattgagct gctgggcatt ggccgtcccg caggccaaga
     4261 tggcggcaag agccgcttgg ctcatcaatc gtttcactat tgcatcctcc tttttttggt
     4321 cgggtctgtt cgtcagacgc caagatagtc gtgaagcttg tcgacgtttg catcgagctc
     4381 atcattggcg aactgatcaa tgatccgtcc atgttccatg acgtaatacc ggtcggcaac
     4441 ggtcgaggcg aaacggaagt tctgctcgac cagcagaatg gtaaagccct gctccttgag
     4501 tgcgcggatg gtcttgccga tctgttgaat aataacagga gcaaggcctt ccgtcggttc
     4561 gtccagcaac aatagtcgcg cgccggtacg caggatacgc ccgatcgcca gcatctgctg
     4621 ctcgccgccg gaaagcttgg tgccctggct ggaacctagc cgttccttca gattggggaa
     4681 ca
//
LOCUS       DATDHO010000999         2351 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_96416, whole
            genome shotgun sequence.
ACCESSION   DATDHO010000999 DATDHO010000000
VERSION     DATDHO010000999.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_96416"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(99..806)
                     /gene="pcaH"
                     /locus_tag="VIY07_19600"
     CDS             complement(99..806)
                     /gene="pcaH"
                     /locus_tag="VIY07_19600"
                     /EC_number="1.13.11.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018578 - protocatechuate 3,4-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0046278 - 3,4-dihydroxybenzoate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protocatechuate 3,4-dioxygenase subunit beta"
                     /protein_id="HEY6383999.1"
                     /translation="MTLVFPKESLSTFPKHLTPGYRSTVKRSPSKPLIVVPHTLSELT
                     GPVYGHDAVQESDADLTKQHKGEPLGERIIVHGHVLDEDKRPVPDTLVEIWQANACGR
                     YVHNVDQHPAPLDPNFTGAGRTITDKKGYYRFVTVKPGAYPWGNHHNAWRPNHIHFSV
                     FGRSFLSRLVTQMYFPGDPLFPFDPIFNSVTDEKARQRMVSTFDLENTIPDWALCFRF
                     DIFLRGREATPQDTDKH"
     gene            complement(831..2042)
                     /gene="pcaF"
                     /locus_tag="VIY07_19605"
     CDS             complement(831..2042)
                     /gene="pcaF"
                     /locus_tag="VIY07_19605"
                     /EC_number="2.3.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0019619 - 3,4-dihydroxybenzoate catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoadipyl-CoA thiolase"
                     /protein_id="HEY6384000.1"
                     /translation="MAREVFLCDAIRTPIGRYGGALAKVRADDLAAVPIKALMARNPA
                     IDWQQVDEVYFGCANQAGEDNRNVARMALLLAGLPTSVPGVTLNRLCASGMEAVGTAA
                     RAIRAGEMEFAIAGGVESMTRAPFVQGKAQEAFSRSTEIYDTTIGWRFVNPLMKQQYG
                     VDSMPETGENVAEEFQVTRADQDAFALRSQQRAGKAIASGYFAKEIVAVEVPGGKAGP
                     IKVDKDEHPRPDTTLEQLAKLKTPFRNPGTVTAGNASGVNDGAAAIIVASEAAVKTHG
                     LKPRARILGMASAAVPLRIMGIGPVPATQKLMARLQHKIDDYSLIEINEAFASQSLAC
                     LRQLGLADDAEHVNPHGGAIALGHPLGMSGARLALTAAHGLEENGGKLALATMCVGVG
                     QGVSLAIERVS"
     gene            complement(2042..>2351)
                     /locus_tag="VIY07_19610"
     CDS             complement(2042..>2351)
                     /locus_tag="VIY07_19610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003529464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CoA-transferase subunit beta"
                     /protein_id="HEY6384001.1"
                     /translation="LDFVTSIGHVSGGDSRARLGVKTKGPTKLITDLALFEPDPETKE
                     MTVVSIHPGVTREQIQVNSGWKIKFASKVAETPPPTKHELEVLRDLHARTDRAHAEAA
                     "
BASE COUNT          440 a          726 c          704 g          481 t
ORIGIN      
        1 gtcgtagata tcgctcggct tccagtcgca acggctgtgc ggcgccagac cataagcgaa
       61 gaacgggccg accgtttgtg agggcgtgat ttccgacatt aatgtttgtc cgtgtcctgc
      121 ggcgtagctt cgcgtccgcg caaaaagata tcaaagcgga agcatagagc ccaatcggga
      181 atagtgttct caaggtcgaa cgtcgaaacc attcgctggc gtgccttttc gtccgtcacc
      241 gaattgaaga tcgggtcgaa cggaaacagc ggatctccgg gaaaatacat ctgcgtcacc
      301 aggcgggaca ggaatgagcg gccgaacacc gagaagtgga tgtggttcgg ccgccaggca
      361 ttgtgatgat tgccccacgg gtatgcaccc ggctttaccg tgacaaatcg gtagtagccc
      421 ttcttgtcgg taatagtccg tccggctccg gtaaagttcg gatcgagcgg agccggatgc
      481 tggtcgacgt tgtgcacata gcgtccgcac gcattggcct gccagatttc caccagcgta
      541 tcgggaaccg gccgcttgtc ctcatcgagc acatgaccat gcacaatgat gcgctcgccc
      601 agcggctcgc ccttgtgctg cttcgtgaga tccgcatcgc tttcctgcac ggcatcgtgg
      661 ccatagactg ggccggtcag ctccgacagc gtatgcggca caacgatcaa tggcttcgat
      721 ggcgagcgct tgaccgtgct gcgatagccg ggcgtcagat gcttgggaaa agtactcagg
      781 ctctcttttg gaaaaaccag cgtcatttcg ttgtccttac ctggcctttt tcaactgact
      841 cgttcgattg caagcgaaac gccttgccca acgcccacgc acatcgtggc aagagcaagc
      901 ttgccgccgt tttcctcgag cccatgtgcc gcggtcaatg ccaggcgggc gccagacatt
      961 cccaggggat gaccgagcgc gatcgcaccg ccgtgcgggt tgacgtgttc ggcatcatcc
     1021 gcgagcccca actgccgcag gcacgctagc gactgcgagg cgaaggcttc gttgatttcg
     1081 atcaaactat aatcatcgat tttatgctgg agccgcgcca tcagcttttg cgtcgctggc
     1141 actggcccaa tccccatgat gcgcagcggc actgccgccg acgccatgcc gagaatgcgt
     1201 gcgcgcggct tgaggccgtg tgtcttcacc gcggcttccg acgccacaat gatcgcggcg
     1261 gctccgtcgt tgactccgga ggcattgccc gcggttaccg tgccgggatt acggaaggga
     1321 gtcttgagct tggcgagctg ctcgagcgtc gtgtcgggcc gcggatgctc gtccttgtcg
     1381 accttgatag ggcctgcctt gccaccgggc acctcgaccg caacaatctc cttggcgaaa
     1441 tatcccgatg caatggcctt gccggcgcgc tgctgggagc ggagcgcgaa ggcatcctga
     1501 tcggcgcggg tgacctggaa ttcttctgcc acgttctcgc cggtttccgg catggaatcg
     1561 acgccgtact gctgcttcat cagcggattg acgaaacgcc agccgatcgt ggtgtcgtag
     1621 atttcggtgc tgcgcgaaaa agcttcctgc gccttgccct ggacaaaggg cgcgcgggtc
     1681 attgattcca cgccgcctgc gatagcgaat tccatttcgc cggcgcgaat cgcacgcgcg
     1741 gcggtgccga ccgcttccat tccggaggcg caaaggcggt tgagcgtcac gccggggacg
     1801 ctcgtcggca gccccgcaag caaaagcgcc atgcgcgcca cgttccggtt atcttcgccc
     1861 gcctggttgg cgcagccgaa ataaacttcg tcaacctgtt gccaatcgat cgcgggattg
     1921 cgcgccatca gcgccttgat cggcaccgcg gcgagatcgt ccgcccgtac tttcgcaagc
     1981 gccccgccat aacgtccgat cggcgtccgg atcgcgtcgc aaagaaaaac ctcgcgcgcc
     2041 atcaggcggc ctccgcgtgc gcgcgatcgg tacgcgcatg aagatcgcgc agcacctcaa
     2101 gctcgtgctt tgtcggcggc ggcgtttcgg caaccttgga tgcaaattta atcttccagc
     2161 cggaattgac ctggatctgt tcgcgcgtaa cgccggggtg aatggaaacc acggtcatct
     2221 ctttcgtttc cggatccggc tcgaacaggg ccaaatcggt gatgagcttg gtcggaccct
     2281 tggtcttcac accgagcctc gcgcgactgt cgccaccgga cacgtgaccg atcgatgtca
     2341 caaaatcgag c
//
LOCUS       DATDHO010001000         1926 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_492360, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001000 DATDHO010000000
VERSION     DATDHO010001000.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1926)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1926)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1926
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492360"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..633
                     /locus_tag="VIY07_19615"
     CDS             <1..633
                     /locus_tag="VIY07_19615"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEY6384002.1"
                     /translation="SSRSKDRRDRGPRIVSMTTPAIRSRESTSVDDVIDLLKAHEYFR
                     GVSDAILGEIAQFAKITHYDAAEIVHQFNDPLASICFILRGRLKAVRVDSRDVEHLFQ
                     MFERGEQYGMMLGGLGEPVPVRIFALEPSTILSLDHEKAMELTLLYPDLRRQWLQSYA
                     RSLRRRFLEPAAVQAPNAAGNSSRIPGDAVPRANDHRPPARIGRSGVRSQ"
     gene            698..1921
                     /locus_tag="VIY07_19620"
     CDS             698..1921
                     /locus_tag="VIY07_19620"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEY6384003.1"
                     /translation="MDVAEIRRQVAEWNHAKRIVVDTTAAQKLDWAALLRAADCALVF
                     VRPHEISSAMERLRALELRSRGWLDKIAIVWVLEGSGVAPGIPEVHEFAKREFKICES
                     PLPHPWGKVNSAGVERLLHYLRGVRIGVALGGGAARGMAHLGVLKTLEDNGIVPDVIV
                     GTSVGAMTGILYSAGLDCDYLANQFGIDLKPPWIFRQLPSGGYWYLLYKYRRGQFDGM
                     LRKYLHDWKLEQLAVPCLAVTVDLVGGHAVVRDRGDAVQAILESINLPMLSIPICRNG
                     QALIDGGFVDNIPADMLTSQDCNFLIAVSVTAKIKSEFGANTPETPTLGMRTPSSLRT
                     LLRTLEVQNFNLNRVGAQPAEVVIAPEVVDFDLSEFMRAQELARVGEQAALVQVPKIK
                     QLLARLDAGLFRVAR"
BASE COUNT          384 a          527 c          596 g          419 t
ORIGIN      
        1 agttcaagga gtaaagatcg ccgcgaccgc gggccaagga tagtttcgat gactactccg
       61 gcaattagat ctagagaaag cacttcggtc gacgatgtta ttgacctgct caaagcgcac
      121 gaatactttc gcggtgtcag cgatgcgata ctcggcgaaa tcgcccagtt cgcgaagatc
      181 actcactacg atgctgcgga aattgttcac cagtttaacg atcctctcgc gtcaatctgt
      241 ttcatactcc gtggccggct aaaagctgtg cgcgtcgact cgcgtgatgt tgagcacctc
      301 ttccagatgt tcgagcgcgg cgagcagtac ggaatgatgc tcgggggcct cggcgaaccc
      361 gtgcctgtgc gcatttttgc attggagcct tcgacaatcc taagcctcga tcacgaaaag
      421 gcgatggagt tgacgctctt gtaccccgac ctgcgccggc agtggttaca gagttatgcc
      481 cgcagcctgc ggcggcggtt cttggagcct gccgctgtgc aggcgccgaa tgctgctggc
      541 aattcttcac gaatccccgg cgacgcagtt cctcgcgcaa acgatcatag gccgcctgca
      601 aggattggga gaagcggtgt gcgttctcag tgatgcggat tcctggcggt cggtacccga
      661 tgtccgcttc cgttcactgt tggatggcaa ccgagtcatg gatgtggcgg agattcgccg
      721 gcaagttgcc gagtggaacc atgctaaacg catcgttgtc gatactaccg ccgcgcaaaa
      781 gttggactgg gcggcgctct tgagagccgc cgattgcgcc ctagtgtttg ttcggccgca
      841 tgagatcagc tctgccatgg agcggctgcg cgctctggag ttaaggtcgc gaggctggct
      901 tgataagatc gcgatcgtat gggtgctgga gggcagcggt gttgcccccg gtatacccga
      961 ggtccatgaa ttcgcgaaac gggaattcaa aatctgcgaa tcgccgcttc cgcatccctg
     1021 gggtaaggtg aattccgcag gggtggagcg cctgctccat tacctgcggg gtgtcaggat
     1081 cggcgtggcc ctcggcggcg gggctgcgcg tggcatggcg catttaggtg tgctcaagac
     1141 tctcgaggat aatggcatcg tccccgatgt gattgtcggc acgagcgtag gagccatgac
     1201 cggaatcctg tattcagcgg gtctggattg cgattatctc gccaaccagt ttggaatcga
     1261 tctgaaaccc ccgtggatct tccgtcagct tcctagcggg ggctattggt accttttgta
     1321 caagtaccgg cgcggccaat tcgatgggat gctgcgaaaa tacctgcacg actggaagtt
     1381 agagcaactg gcagtaccat gtctcgccgt tacggtcgat ctggtgggcg ggcacgcagt
     1441 ggtcagggac cggggagacg ccgtgcaagc gattctcgaa agcatcaacc ttccgatgct
     1501 ttcgattccc atctgccgca acggacaggc gctgatcgat ggcgggttcg tggacaacat
     1561 tcccgcggat atgctcacgt ctcaggactg caacttcctg attgccgtga gcgttacggc
     1621 caaaatcaaa agcgagtttg gcgccaacac gccggagacg cctacgctcg ggatgcgaac
     1681 gccgtcaagc cttcgaacgc tgttacgtac cctcgaagtg caaaatttca acctcaaccg
     1741 ggtcggtgcg caaccggccg aagtggtgat cgcgcccgaa gtcgtagact tcgacctgtc
     1801 ggagttcatg cgcgcacagg aacttgcgag ggtcggcgaa caggccgcgc tcgttcaggt
     1861 gccgaaaatc aaacaattgc tggcgcggct cgatgcgggg ctttttaggg ttgctcggtg
     1921 atgccg
//
LOCUS       DATDHO010001001         2463 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_492488, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001001 DATDHO010000000
VERSION     DATDHO010001001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2463)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2463)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2463
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_492488"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..924)
                     /locus_tag="VIY07_19625"
     CDS             complement(<1..924)
                     /locus_tag="VIY07_19625"
                     /inference="COORDINATES: protein motif:HMM:NF024841.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HEY6384004.1"
                     /translation="MLFTAFVVALAVPLDVSAQQQFPSTLAGHAYLPAQAISLAPPQD
                     APESFAISGKYTGPNWRRVDAVGTIPGTSYISDKSAPRPTGVSTPFKGQPLQGFSGIK
                     AMEDGSFWVMTDNGFGAKKDSADALLMFHRIKPDLKAGTVQHLRTVFLHDPDSKIPFL
                     IVNESTKQRYLTGADLDIESMQFVGDSVWFGDEFGPYLVNTDLNGKVLGLYEAKLHDK
                     PLRSPDHYAVNTPAVPGSFSTPVRRSRGFEGMAASKDGKVLYPLLEGPLWIEAEKKCE
                     DVCSGALRPDCYPAAAKFKRVYKISLKDADAD"
     gene            complement(1006..2208)
                     /locus_tag="VIY07_19630"
                     /pseudo
     CDS             complement(1006..2208)
                     /locus_tag="VIY07_19630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136952.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            2120..>2463
                     /locus_tag="VIY07_19635"
     CDS             2120..>2463
                     /locus_tag="VIY07_19635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6384005.1"
                     /translation="MRIAIGVCAEAGYCNTNVAQRHAASEMMRMMASRSAKIFKPDGL
                     RPLTKEFPLFMRRQQQCPLWVMCGRRLGKNFLTQLQHWSGAVMCPACLCGSEAAGHNA
                     IRGSGPNQKHAL"
BASE COUNT          491 a          731 c          716 g          525 t
ORIGIN      
        1 gtctgcgtcg gcgtccttca ggctgatttt gtagacgcgt ttgaacttgg ccgcggccgg
       61 gtagcaatcg ggccgcagcg ccccactgca gacatcctca cacttcttct ccgcctcgat
      121 ccagagcggc ccttcgagca gcgggtagag gactttgccg tccttcgacg cggccatgcc
      181 ctcgaagcca cgtgagcggc gcactggcgt ggagaacgaa cccggcactg ccggagtatt
      241 cacagcgtaa tggtcgggcg agcgcagcgg cttgtcatgg agcttggcct cgtacagtcc
      301 cagcactttt ccgttcaggt cggtgttgac aaggtacggg ccaaattcgt cgccgaacca
      361 gaccgagtcg ccgacgaact gcatcgactc gatgtctaaa tcagcgcccg tcaggtagcg
      421 ctgtttggtg ctttcattga cgatgaggaa cggaatcttg ctgtcaggat cgtgtagaaa
      481 cacagtacgc aggtgctgga ccgttccagc cttcaagtca ggcttgatgc ggtgaaacat
      541 gagcagcgca tcggcactat cctttttcgc gccgaaaccg ttgtcggtca tcacccaaaa
      601 gctaccgtct tccatcgcct tgatcccgga gaatccttgc agcggctggc ctttgaacgg
      661 tgtggaaacg ccagtcgggc gtggtgcaga cttgtccgag atataagacg ttcccgggat
      721 ggttcctacc gcatcgacgc gccgccagtt gggacctgta tatttgcccg agatggcaaa
      781 cgactcgggc gcatcctggg gcggcgccaa agaaatcgct tgcgccggca gatacgcgtg
      841 cccggcgagc gtacttggaa attgctgttg ggcagacaca tcgagcggaa cggcgagcgc
      901 aacgacgaac gctgtgaaca gcaaccatcg actcatgggt tccctccctt atcaacactg
      961 agctggcaca ctagtcgccg aatgagattt cggtcccccg gtggcttatt tctttacgag
     1021 cgcgcatttg ctttggtcga gcggctgcac tgcgtcgttc gccgctatgg tacttaggac
     1081 tttgtagtaa tcccacgcgg ccttcgactc gtcgggcttc ttcacctcga cgagcagcat
     1141 gtcgtgaacc atgcgaccgt cttcgcgcac gaaccctttg gcgaagaaat cgtccacttt
     1201 tagctcgcgc atcttcgccg ccacggcctt gccgtcggcg tttccagcgg ccgcgatggc
     1261 ctttagataa tgcagcacgg cagaataggt acctgcctgc accatgccgg gcatgcgacc
     1321 cgttcgatcg aagaaacgct tcgaccatga gcgcgtctgc tcattcaggt cccaataaaa
     1381 tgcggttgta aaagtcaggc cgttcgcgat cggcaggccg agcgcatgaa tgtcgctcaa
     1441 gacaaccaca agtcccgcga gcttttgtcc gccggccgcg atgcgaaact cagccgcttg
     1501 cttgaccgaa ttgatcgtgt cggcaccggc attggcgagg cctatgatct gcgctttgga
     1561 tgaggacgcc tgcagcagaa acgaagagaa gtcctgcgta ttgagcggta cgcgcacctc
     1621 gccgcgtaca gcgccgccgt tctccttaac gacgcgggag agatcggcgg ccatttgatg
     1681 accgaaggca tagtcggccg ccaggatgaa ccagctcttg ccgccttgcg ctacaatcgc
     1741 acgcgcggtc ccgaccgcct gggaataagt atcgaacgcc caatgaaagc cggtgggcga
     1801 gcaatcttca ttggtcagtc gcgtcgttgc cgggccgacg gccaaagtga tctttccatg
     1861 gtcgttggcg atcttttgaa ccgcgagcgc gaccgcggaa tttgtcaatt cggctatggc
     1921 gctcacattt tcgagatcaa accagcggcg cgctatattg gcagcgatgt ccggcttgtt
     1981 ctggtgatcg ccgaccacga tctccaccgg tttcccgagc acctttccgc cgaagtcctc
     2041 gaccgccatc tgcgcggcgg tgaccgatgt cttgccgcca aaatcggcat aagggccagc
     2101 ctgatcgttg agaatgccaa tgcgtatcgc aatcggcgtc tgcgccgagg cgggctactg
     2161 caacacgaac gtcgcgcaga gacacgcggc cagcgaaatg atgcgcatga tggcctcccg
     2221 gtcagctaaa atttttaagc ccgatgggct aaggcctctc acaaaggagt ttcctctttt
     2281 tatgcgcagg cagcaacaat gtccgctttg ggtcatgtgt ggacggcgcc ttggcaagaa
     2341 ctttctgacg cagctgcagc attggtcggg tgcggtcatg tgtccggcct gtttgtgcgg
     2401 cagtgaagcc gctggccata atgctattcg cggatcgggt cccaatcaaa aacacgcact
     2461 tta
//
LOCUS       DATDHO010001002         4206 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_97430, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001002 DATDHO010000000
VERSION     DATDHO010001002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4206
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97430"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..227)
                     /locus_tag="VIY07_19640"
     CDS             complement(<1..227)
                     /locus_tag="VIY07_19640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEY6384006.1"
                     /translation="METKGHAAIVTGGASGLGAATARALAAAGTKVAVIDVNEKAATE
                     VATDVKGIAVGCDVADSASAEAAVKKAVAAHG"
     gene            complement(227..2110)
                     /locus_tag="VIY07_19645"
     CDS             complement(227..2110)
                     /locus_tag="VIY07_19645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="feruloyl-CoA synthase"
                     /protein_id="HEY6384007.1"
                     /translation="MPGSAPRVETQAAAPLRAVRLGKPDAVLERRPDGAVHIRAAQSL
                     GRYHDNLSQPLEYWAKTAPDRVFLAQRDAQGQWRKLSYAQVLSDAKHIGAALLRRGLS
                     AEKPIVVISGNDIEHALLALGAMYVGIPYAPISAAYSLMSSDFSKLREIVNLLTPGLV
                     FANDGGPFARALYQTVPDDIELVVTRNPLGDRKTTMFADLLGATDETGVAAANRAVSA
                     DTIAKFLFTSGSTGNPKGVINTHRMLCSNQAMLGSGFAFVTDEPPVVVDWLPWSHTFG
                     SNHNFNMVLTYGGSLYIDDGNPTPPGVPKTARNLREIAPTIYFNVPKGYEALIAHFRA
                     DEDLRRNFFSRLKVLFYAGAGLNQTTWDELTRLAVETTGERIIFLSSLGSTETAPLAL
                     ACSWDFDRPGNIGLPAPGVELKLVPNEGKLEARLRGPHITPGYWRQDHLTHEAFDEEG
                     YYRLGDALKFVDPNDPAKGLLFDGRIAEDYKLSTGTWVSVGPLRARFLDHFAPYVRDV
                     VFAGADRDDIAVLIFPDVEACRKLSALAPDASLDQIIEAPPVRRKFTELLVKLAALSP
                     GSSTRVERAILMAEPPSMDKGEMTDKGSINQRTVLKNRSVLVDELYAVPLSSRVIAGE
                     GKR"
     gene            complement(2124..2918)
                     /locus_tag="VIY07_19650"
     CDS             complement(2124..2918)
                     /locus_tag="VIY07_19650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HEY6384008.1"
                     /translation="MKERLATRLPTSLFAEREGPVAILKLNRPQKRNALDDDTIVGIE
                     QFFTSLPSSVHAVLLAGEGEHFSAGLDLSELEDRDIAQGITHSSLWHRAFEKIQFGKV
                     PVVAALHGAVIGGGLELAAAAHVRVAERSAYYALPEGSRGIYVGGGGSVRLPRLIGVA
                     RMMDMMLTGRTYSAEEGQAMGLTTYLVETGEGFAKGLELAKRIAANAPLTNFAVMHAL
                     PRIAEMDPASGYAVEALMSAIAQADPDAKARLKDFLQKRAPKVTRT"
     gene            complement(2918..3370)
                     /locus_tag="VIY07_19655"
     CDS             complement(2918..3370)
                     /locus_tag="VIY07_19655"
                     /inference="COORDINATES: protein motif:HMM:NF023010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3237 domain-containing protein"
                     /protein_id="HEY6384009.1"
                     /translation="MLGKQPIFTIRAELEAITSLGRTPYGERRVIGILGGTVHGPKLT
                     GRILPGGADWQIIRSDGAADIKARYTIEAEGGALIMVTSEGLRHGPPEVMTKLARGDN
                     VDPAHYYFRTVMRFETADPSVDWLNRILAVAKGQREPRAVRLDVYEVE"
     gene            3469..>4206
                     /locus_tag="VIY07_19660"
     CDS             3469..>4206
                     /locus_tag="VIY07_19660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015888206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase subunit A"
                     /protein_id="HEY6384010.1"
                     /translation="MARISSLAEAIQSAVRDGDTVALEGFTHLIPHAAGHEIIRQGRK
                     GLTLIRMTPDLIYDQLIGMGCVTKLVFSWGGNPGVGSLHRLRDAIENGWPQKLELEEH
                     SHAAMANAYEAGAAGLPCAIFRGYIGGDLPKVNSKIKRVTCPFTGEELAAVPAHRPDV
                     AVIHAQRADKVGNVMIEGVLGVQKEAVLASKRSVVTVEEIVDELPERSLNAVVLPNWT
                     VGHVVEVPGGAYPSYTQGYYPRNNTFYK"
BASE COUNT          770 a         1298 c         1331 g          807 t
ORIGIN      
        1 ccatgcgcgg caacggcttt cttcacagcc gcttcagcgc tcgcgctgtc agcgacgtcg
       61 cagccgacgg cgatgccctt gacgtcggtc gccacttccg tggccgcctt ttcattgacg
      121 tcgatgactg caactttcgt gcccgcagcc gcaagtgcgc gcgcggtggc ggcgcccaga
      181 ccggacgcgc cgccggtgac gatggccgca tgtcctttcg tttccatcag cgctttcctt
      241 cgcctgcgat gacccgcgaa gatagaggca cggcatagag ttcgtccacc agcacggagc
      301 ggttcttcag taccgtgcgc tggttgatcg agcccttgtc ggtcatttcg cctttgtcca
      361 tggagggcgg ctcggccata aggatcgcgc gttcgacgcg ggtcgaggag ccgggactga
      421 gcgcagcgag cttgaccagc aactcggtga attttcgccg caccggcggg gcttcgatga
      481 tctgatcgag agatgcgtcg ggcgcgagag cgctcagttt tcgacaggct tccacgtcgg
      541 gaaatatcag caccgcgata tcgtcacggt cggcgccggc aaacacgacg tcgcgcacgt
      601 acggtgcgaa gtgatcgagg aaacgtgcgc gcaaggggcc cacgctcacc catgttcccg
      661 ttgaaagctt gtagtcttcg gcgatgcggc cgtcgaacag gagccctttg gcggggtcgt
      721 tcggatcgac aaatttcaat gcatcgccga gccggtaata gccctcttcg tcgaaggctt
      781 cgtgggtcaa gtgatcctgt cgccagtatc cgggcgtgat gtgcgggccg cgcaatcgcg
      841 cttcaagctt gccctcgttc ggaacgagct tgagctcgac gccgggtgcc ggcaggccga
      901 tgttgccggg gcgatcaaaa tcccacgagc acgccagtgc cagcggcgcg gtctcggtcg
      961 agccaagcga agacaggaag atgatgcgct cgccggttgt ttcgacggcg agccgcgtca
     1021 gttcatccca tgtggtctgg ttcaggccgg cgccggcgta aaacagcacc ttgaggcggc
     1081 tgaagaagtt tcggcgcaag tcctcgtcgg cgcggaagtg agcgatcagc gcttcatagc
     1141 ccttggggac gttgaaatag attgtgggcg cgatctcgcg caggtttctc gctgttttcg
     1201 ggacgccggg cggcgtcgga ttgccgtcgt cgatatagag tgacccgccg taggtgagca
     1261 ccatattgaa gttgtggttg ctgccgaacg tatggctcca cggcagccag tcgacgacga
     1321 caggcggctc gtccgtcacg aaagcaaaac ccgatcccag catcgcctgg ttcgaacaca
     1381 gcatgcggtg cgtgttgatg acccccttgg gatttcccgt tgaaccggag gtgaacagga
     1441 acttggcgat tgtatccgcc gacaccgcgc ggtttgcggc agcgacaccg gtctcgtcgg
     1501 tcgcgccgag aagatcggca aacatcgtgg tcttgcggtc gccaagcgga ttgcgcgtga
     1561 cgaccagttc gatgtcgtcg ggaaccgtct gatagagggc gcgcgcgaac ggtccgccgt
     1621 cattggcaaa aactaggccc ggcgtcagga gattgacgat ctcccgcaat ttgctgaagt
     1681 cgctcgacat cagcgaatag gcggccgata tcggcgcgta cggaatgccg acatacattg
     1741 cgcccagagc aagcagggcg tgctcgatgt cgttgcccga gatcacgacg atgggctttt
     1801 cggcagacag tccgcggcgg agcagcgcgg cgccgatgtg ctttgcgtcg gagaggacct
     1861 gcgcgtagga aagtttgcgc cattgaccct gcgcgtcccg ctgcgcaaga aacacgcgat
     1921 caggcgcagt cttcgcccaa tattccagcg gttggctcag gttgtcgtgg tagcggccga
     1981 gactttgtgc ggcgcggata tgaacggcgc catccggtcg ccgctcaaga acggcgtcag
     2041 gttttcccaa ccgcacggcg cgaagcggcg cggctgcctg cgtttcgacg cgtggagctg
     2101 atcccggcat acactgctcc cactcaggtc cgagtcactt taggcgcgcg cttctgcaaa
     2161 aaatccttca gccgcgcctt ggcatcggga tctgcctgcg cgattgccga catcaaggcc
     2221 tcgaccgcgt agccgctggc cggatccatt tcagcgatgc ggggcagcgc gtgcatcacc
     2281 gcgaaattcg tcagtggcgc gttggcggca atacgcttcg ccaattcgag acccttggca
     2341 aagccctcgc ccgtctcgac caggtatgtg gtcaggccca tcgcctggcc ttcttccgcc
     2401 gagtaagtgc ggcccgtcag catcatatcc atcatgcgcg cgacaccgat cagccgcggg
     2461 agtcgtaccg aaccgccacc gccgacatag atgccgcggc tgccttccgg caacgcgtag
     2521 taggccgagc gctctgcgac gcgcacatgc gcggcggcgg cgagctccag gccgccgccg
     2581 atgaccgcgc cgtgcaaagc ggcaacgacc ggcaccttgc cgaactgaat cttttcgaac
     2641 gcgcgatgcc acaggctcga atgcgttatt ccctgcgcaa tgtcgcgatc ctccagttcc
     2701 gacagatcaa gaccggcaga gaagtgttcg ccctcgccag cgaggagcac ggcatggaca
     2761 ctgctcggca acgacgtgaa gaactgctcg atgccaacga tggtgtcgtc atcgagggcg
     2821 ttgcgtttct gcggacgatt gagcttcagg attgcgaccg gaccttctcg ctcggcgaaa
     2881 agggaggttg gaagcctggt tgccagccgc tctttcatca ttccacctcg tagacatcga
     2941 gccgcactgc gcgcggctcg cgttggccct tcgcgacggc gagtatgcgg ttgagccagt
     3001 cgaccgaagg atcggcagtt tcgaaccgca tcacagtgcg aaaataataa tgagcgggat
     3061 cgacattgtc gccccgggcc agtttcgtca tcacctcggg tggaccatgg cgcaggccct
     3121 cgctggtcac catgatcagt gcgccgcctt ccgcctcgat cgtgtagcgg gctttgatgt
     3181 cggcggcgcc gtcgctgcgg atgatctgcc aatcagcacc gcctgggaga atccggccgg
     3241 tgagttttgg cccatgaacg gtgcctccga ggatcccgat tacccgccgc tcgccgtagg
     3301 gggttcgccc gagactggtg atggcctcga gttcggcacg aatcgtgaag atcggctgct
     3361 tgcccaacat cgatgacgat ccgttggagc tccaacttgt gacgtgatcg ccatttgacc
     3421 ctgtcgatgg gcagccgtaa atacggacca caaccgggat cagttcgtat ggcgcgtatt
     3481 tcctcgctcg ccgaagccat ccaatcagcc gttcgggacg gcgacaccgt ggctctcgag
     3541 gggtttactc atctcatccc ccacgccgcc ggccacgaga tcatccgcca gggccgcaag
     3601 ggattgacgc tgatccggat gacgccggat ctcatttacg accagctcat cgggatgggc
     3661 tgcgtcacca agctggtttt ttcatggggc ggaaatcccg gtgtcggttc gctgcaccgt
     3721 ctgcgagatg ccatcgagaa cggctggccg caaaagctcg aactggaaga gcattcgcac
     3781 gcagcgatgg ccaatgccta tgaggccggt gcagccggtc tgccctgcgc cattttccgc
     3841 ggctacatcg gcggcgatct gccgaaagtg aattcgaaaa tcaagcgcgt cacatgtccg
     3901 ttcaccggcg aggagcttgc cgccgttccg gcgcatcggc ctgatgtggc ggtgattcac
     3961 gcgcagcgcg ccgacaaggt cggcaacgtc atgatcgaag gcgtgctcgg cgtgcagaag
     4021 gaagccgtac tcgcatccaa gcgttcggtg gtgacagtcg aggagattgt cgacgagctt
     4081 cccgagcgca gtctcaacgc ggtcgtcctg ccgaattgga ccgtgggcca cgtggtcgag
     4141 gtgccgggcg gcgcctaccc gtcctatacg cagggctatt acccccgcaa caacaccttc
     4201 tacaag
//
LOCUS       DATDHO010001003         2506 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_97457, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001003 DATDHO010000000
VERSION     DATDHO010001003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97457"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..376)
                     /locus_tag="VIY07_19665"
     CDS             complement(<1..376)
                     /locus_tag="VIY07_19665"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HEY6384011.1"
                     /translation="MTRSFSLVPLCLIVLLALTAPAAAQIPPSGAEIAAYRGLHAAAA
                     RGDASEIERLVRAGTTIDARDSHGRTPLHVAVFMRKQDATRTLLRLGADPNALESQQY
                     DIVTIAAVADDVPMLRIALDGRC"
     gene            complement(384..1337)
                     /locus_tag="VIY07_19670"
     CDS             complement(384..1337)
                     /locus_tag="VIY07_19670"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter substrate
                     binding protein"
                     /protein_id="HEY6384012.1"
                     /translation="MRGAVLAAAVLWAACAFAQDYPSRPIRIIVPTPAGGPVDVMARV
                     LANALPAVLGQTVFNENKPGAGNTIGSRQAAAADADGYTLMVSAASGLIMSPMIVKNA
                     GYDASSFAPVALIAETPQILVINPQLPFKSVAELVAYARENPGKLNYSTGGIGTLPHL
                     NAELFKSVSGANILHVPYKGGGPSLIAVLTGEVQMTFDTVSTSLQLIQDGKLRGLAIV
                     GPKRAPELPDVPAMPEIGFPALTSGAWTALMAPLDTPRPIIMKLNAATNDALSGQSMK
                     DALARLGAQPRGGTPQDLADHIQREMAKWKPIVAALNLKSD"
     gene            complement(1406..1630)
                     /locus_tag="VIY07_19675"
     CDS             complement(1406..1630)
                     /locus_tag="VIY07_19675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6384013.1"
                     /translation="MLKAFAAIVAAAVVAGGITILSAPVGDVVASPLPLPAAEAITTC
                     KQRPWPYLNCVGTEFGDPRVRLISFDRPTR"
     gene            1771..2268
                     /gene="coaD"
                     /locus_tag="VIY07_19680"
     CDS             1771..2268
                     /gene="coaD"
                     /locus_tag="VIY07_19680"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEY6384014.1"
                     /translation="MPRIALYAGSFDPVTNGHLDVVRHAVRLADRLVLAIGLHPGKAP
                     LFSADERLAMLQEICGPVAREAKCELSCITFADLVVNIARKEGAAILIRGLRDGTDLD
                     YEMQMAGMNAAMAPDIQTVFLPASPLVRPITATLVRQIAGMGGDVSSFVPSPVAARLK
                     KKFAR"
     gene            2294..>2506
                     /locus_tag="VIY07_19685"
     CDS             2294..>2506
                     /locus_tag="VIY07_19685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6384015.1"
                     /translation="MMISRRSTLTLATNLAFLAAPALAQSPLSNPASLKEQAPATYKV
                     RFDTTKGAFVVEVTRAWAPRGADRFYN"
BASE COUNT          476 a          763 c          788 g          479 t
ORIGIN      
        1 ggcatctgcc gtcaagcgcg atccggagca tcggcacatc gtcggcaacg gccgcaatgg
       61 tgacgatgtc gtattgctgg gattcgagtg cgtttggatc ggcaccaagg cgcaacaagg
      121 tgcgtgtggc atcctgcttg cgcataaaaa cggcgacgtg aagcggcgtg cggccgtggc
      181 tgtcgcgcgc atcgatcgtc gtgccagcac gcaccaggcg ttcgatttcg ctggcatcgc
      241 ctcgggccgc cgcggcgtgc aggccacgat aggccgctat ttcggccccg ctcggcggaa
      301 tttgcgccgc agcgggagcc gttagagcga gaagtacaat caaacacagc gggaccagtg
      361 aaaacgatcg agtcatagcc gtttcaatcc gacttcaaat tgagtgccgc cacgattggt
      421 ttccatttcg ccatctcgcg ctggatgtga tcagccaggt cctgtggcgt cccgccgcgg
      481 ggctgggcac cgagcctcgc cagcgcatct ttcatgcttt ggccgctaag cgcgtcattt
      541 gttgcggcat tcagcttcat gatgattgga cgtggcgtgt ccagaggggc catcagcgcc
      601 gtccacgcac cgctggtcag tgccggaaac ccgatctcag gcatcgcagg cacatccggc
      661 agctccggtg cgcgtttcgg accgacgatt gcaagccccc gcaatttgcc atcctggatc
      721 agttgcagcg acgtgctcac cgtgtcgaag gtcatctgca cttcgcctgt caggacggcg
      781 ataagagagg ggccgccgcc cttataaggc acatgtaaga tgttggcccc actgacagac
      841 ttgaacaatt cggcattcaa atgcggcagc gttccaatac cgcccgtcga atagttaagt
      901 ttgccagggt tttcccgggc gtaagcgaca agttcggcaa cagatttgaa aggcaactgc
      961 ggattgatca ccaggatctg cggcgtttcg gcgatgagcg ccacgggtgc aaagcttgac
     1021 gcgtcatacc ctgcgttctt gacgatcatc gggctcatga tcaggccgct cgcagccgaa
     1081 accatcagcg tgtacccgtc cgcgtcggcg gcagccgcct gccgcgagcc aattgtattg
     1141 cctgcacccg gcttgttttc attgaacacg gtctgcccga ggactgccgg cagtgcattg
     1201 gcgagcacgc gggccatcac gtcgaccggc ccaccggcgg gggtcggcac gatgatgcgg
     1261 atcggccggc tcggataatc ttgcgcgaac gcgcaagccg cccacagcac tgcggcggcg
     1321 aggacagccc ctcgcatgta ctctcctcgg gcacaatctc aggacagcct agcgctgaag
     1381 cgggagatga ataaagcatc tgttgttacc gggtcggccg gtcgaatgaa atcagccgaa
     1441 cgcgtggatc gccaaattcg gtgccgacgc aattgagata gggccaagga cgctgcttgc
     1501 acgtcgtgat ggcttctgcg gcgggcaggg gcagggggct cgcgacaacg tcgccaaccg
     1561 gcgccgagag aatagtgatg cctccggcaa cgacagcggc ggccacgatg gcggcgaagg
     1621 ctttcaacac gagagtcccc tttttagctc gagcaaccgc ccctctcagg cgcggtcttg
     1681 cgggacatag gtcgcggcag ccggggaaaa ggttcaaacc gcaaaggcgc ggtcttgcgg
     1741 ggcatcgggg ggcaggttag accccgtttc atgccgagaa ttgcccttta tgcggggtca
     1801 tttgacccgg tcaccaatgg tcatctcgac gtggtgcggc atgccgttcg tctcgccgac
     1861 cggctggtcc ttgcgatcgg gcttcaccct ggcaaggcac cgctattttc cgccgacgag
     1921 cgtttggcga tgttgcagga gatctgcggt cccgtggcgc gcgaggccaa atgcgagctg
     1981 tcgtgcatca cctttgcgga cctggtggtg aacattgcgc ggaaggaagg cgccgccata
     2041 ttgatccgcg gcctgcgcga tggcaccgat ctcgattatg aaatgcagat ggcggggatg
     2101 aacgcggcca tggcgccgga catccagacg gttttcctgc ccgcatcgcc ccttgtgcgc
     2161 ccgatcaccg ccacattggt acgccagatc gcggggatgg gcggcgatgt ttccagcttc
     2221 gtgccgagcc ctgtagccgc gcgcctgaaa aaaaagtttg cgcggtgaat gtgcaacgtc
     2281 ctcaacgggg agaatgatga tcagccgccg atcaacactc acgcttgcga ccaatcttgc
     2341 ctttttggca gcgcccgccc tggcacagtc tccgctctcc aatcccgctt cgctgaaaga
     2401 gcaggcgccg gcaacctaca aggtgcggtt cgacacaacc aagggcgcat ttgtcgtcga
     2461 ggtcacgcgc gcttgggctc cgcggggcgc cgaccgcttc tacaat
//
LOCUS       DATDHO010001004         2423 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_493761, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001004 DATDHO010000000
VERSION     DATDHO010001004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493761"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..700
                     /locus_tag="VIY07_19690"
     CDS             <1..700
                     /locus_tag="VIY07_19690"
                     /inference="COORDINATES: protein motif:HMM:NF012618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HEY6384016.1"
                     /translation="KLVKLWNLNTGSTVHQLAGHPQLLESYPYKFSQDGKLLATSGAG
                     QVRLWELPSARLRFETADGAGTNVAFAFSPDGRTLAGTNEDTNVRVWDAHSGKLLRVI
                     DELPLLTTSLTFSRDGAHLISAGLDPNIYMWDTATWKRVRQFEEGQRESILSMALSPD
                     GRMLVTGGLDPATVDNPAHVILWDLNSGKALKTIRLPHAVIGVAFSPDARRIAVANLE
                     NDVKLWQVSNLRER"
     gene            804..2372
                     /locus_tag="VIY07_19695"
     CDS             804..2372
                     /locus_tag="VIY07_19695"
                     /inference="COORDINATES: protein motif:HMM:NF012363.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HEY6384017.1"
                     /translation="MKIVAAVFIVLAAIAGSADDSGPTVSVTGGQVRGALLDNGGAVF
                     KGIPYAQPPVGDLRWREPMPVKPWSGVRDATAFGAPCAQNASPILPGAAAMSREDCLF
                     LNVWTPEWPSRSRKPVMVWIPGGGNFQGASSQPVYDSDSLARRGVVLVTLNYRLGAFG
                     FFSHPALTRESRHHASGNQGILDQVAALTWVRDNIGRIGGDPNNVTIFGESAGSLDVS
                     VLMTSPLSKGLFKRAIGESGAVILLGDPSTLPQAEKRGETWAAGWKVPAGASARDLRA
                     VSATDILAAEERNFIAAPAPNLGVTVDGYVFPKQPAEIFATGQQHRVALLLGSNARER
                     IPGTTPPTDLKKAIEDTFGPIAGRAQVLYVGGADPLYGTPADQWATDTSFRCSAVAQL
                     VWHAAAGNPSFEYEFARVPSGREAAGATHASELSFVFGTLEKGIFAGRPGGPPILPTA
                     VDTQVSDVMQRYWTNFAKTGNPNGGQLPAWPQFDVSSRAYLQFTDAGPVAKEGLRRPF
                     CDLFIENVKRLMAQ"
BASE COUNT          467 a          683 c          802 g          471 t
ORIGIN      
        1 caaattggtg aaattgtgga acttgaacac tggtagcaca gtccaccagt tagcggggca
       61 cccccagttg ctggagagct acccctacaa gttttcacag gatggaaagc ttttggcaac
      121 gagcggtgct ggacaggtaa gactgtggga gctgccgtcg gcccggctgc gatttgagac
      181 tgcggacggg gccggcacca acgttgcgtt tgccttttct ccagacggca ggacactggc
      241 aggcaccaat gaggacacga atgtgcgagt ctgggatgcg cacagcggga aacttctgcg
      301 cgtcattgac gagttaccgc tgctgactac gtctctcacg ttttctcggg atggggccca
      361 cctgatttcg gcgggtctgg atccaaacat ctacatgtgg gacaccgcga cctggaagcg
      421 cgtccgtcag tttgaagagg gacaacggga atccatcttg tcgatggctc tgtcacccga
      481 cggccgaatg cttgtcaccg gcggcctcga tccagccact gtcgacaacc ccgctcacgt
      541 gatcctctgg gatctgaatt caggcaaggc gctgaaaacc attcgactgc ctcacgctgt
      601 gatcggagtc gcattctctc ccgatgcgcg caggattgcg gtggcgaatc tggaaaatga
      661 cgtgaaactg tggcaagtgt cgaatctgcg cgaacggtga aatgcggtgg cggcaagttg
      721 agccggcgaa tgacgcgctc ctcgaaatga gtgccgaccg cggtcgcctc tctatccagt
      781 caattcgcgt ggagggctga ggaatgaaga ttgtggccgc agtgttcatt gtgctcgcgg
      841 cgattgcggg gagcgctgac gattctggcc cgacggtcag cgtaactggc gggcaagttc
      901 gaggtgcgct cctcgacaat ggcggggccg tattcaaagg cataccgtat gcccagcctc
      961 cagttggcga cctgcgatgg cgcgaaccga tgccggtgaa gccgtggagt ggagtccggg
     1021 acgccacggc cttcggcgcc ccctgtgcgc agaacgcgag ccctatcctg ccgggggcgg
     1081 cggcgatgag tagggaagac tgcctgttct tgaatgtctg gaccccggag tggccgagca
     1141 ggtcgcgcaa gccggtgatg gtgtggattc ctggcggcgg gaacttccag ggggcaagtt
     1201 cccaacctgt ctacgacagt gacagcttgg cccggcgcgg cgtggtgttg gtgacgctca
     1261 actaccgctt gggagcgttc ggcttttttt cgcatccggc gctgacgcgc gaatcgcgcc
     1321 accacgcgtc gggaaaccaa ggcattctcg accaggtcgc cgcgctcacg tgggtgcgtg
     1381 acaacatcgg gaggatcggc ggcgatccga acaacgtgac gattttcgga gagtcggccg
     1441 gatcgctgga tgtcagcgta ctgatgacat cgccgctgtc gaagggattg ttcaagcgcg
     1501 caatcggcga aagcggagcg gtgatcctcc ttggcgatcc gtcgacgctg ccgcaagcgg
     1561 agaagcgcgg tgagacgtgg gcagcgggct ggaaggtgcc tgctggcgcg tcggcaaggg
     1621 atttacgcgc ggtttcggcg acggacattt tggcggcgga agaacggaat ttcattgccg
     1681 cgcccgcgcc aaatcttggc gttaccgttg atggctatgt gttcccaaag caaccggcgg
     1741 agatcttcgc gaccggccag cagcaccgcg tcgcgctcct gctcggcagc aatgcccggg
     1801 agcgcattcc ggggacaacg ccgcccacgg atttgaagaa ggccattgaa gacacattcg
     1861 ggccgatagc cggacgcgcg caggtactct atgtcggcgg ggccgatccg ctctatggca
     1921 cgcccgctga tcaatgggcc accgatacgt cgttccggtg ctcggcggtg gcgcagttgg
     1981 tatggcacgc tgcggcaggg aatccgtcct tcgagtatga attcgcccgc gttccgagtg
     2041 gaagagaagc ggcgggggca acccacgcat cggaactctc cttcgtcttc gggacgctcg
     2101 aaaaaggaat cttcgctggg cgccccgggg ggccgccgat attgcccacc gccgtggaca
     2161 cacaggtttc cgacgtgatg cagcgatact ggacgaattt tgccaagact ggcaacccca
     2221 acggcggcca attgccggcc tggccacagt tcgatgtctc gtcacgggca tacctccaat
     2281 ttacggatgc cggtccggta gccaaagaag gtctgcggcg tccattctgt gacctgttta
     2341 ttgaaaacgt gaagcggctg atggctcagt gagcaggagt ggcgcaggga ccagtattcc
     2401 ggaggttcaa gcagtgtgct ttt
//
LOCUS       DATDHO010001005         4259 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_493926, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001005 DATDHO010000000
VERSION     DATDHO010001005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4259)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4259)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4259
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_493926"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2203)
                     /locus_tag="VIY07_19700"
     CDS             complement(<1..2203)
                     /locus_tag="VIY07_19700"
                     /inference="COORDINATES: protein motif:HMM:NF012801.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEY6384018.1"
                     /translation="MAKIANAFATAGVVVMAVTALALHRASAQAPIQLPPIDVIGTTP
                     LSTAPGAGGPADITAIDRDKVPANTQTLTPQDFDHAKSNSVPDSLLQRVPSVFNNDTA
                     VNPFQPDVQFRGFLASPTVGTPQGLAVYQNGARVNEVFGDTVNWDFIPSYAIHRLDVV
                     PNDPAYGLNALGGAIAIQMKNGFNYHGSEAEFRGGSFGRRAVTMQSGQQFGNVAAYVA
                     ADGLNDDGWRDQSASKLRRVFADIGARSETSEFHINYTGAQNSFGAAAATPIQLLDQR
                     WSSIYTTPQTYKNRLNFVNAVGSHNFSDRLNIKANAYYRGFRQKHDDGNTSDVEECPG
                     DPTILCLDDDPLNGGGIPTSILNGNLAGSIDRTQTKADAYGASAQLTSTSEVWGRQNH
                     FVVGASIDRGRANFQASSELGTVGSDLFVTGTGVIVNQPDGLVAPVNLITRNTYTGLY
                     VTDTFDITRQLSVTAGGRFNIANIQLEDQIGTALNGTNNFQRFNPVIGATYKITPQVT
                     TYAGYSESNRAPTPSELGCADPARPCLLDAFLVSDPPLQQVVGRTWEAGFRGRHNLGD
                     KRTLTWNVGAYLTDTQDDIMNVPSTITGRGFFQNVGGTRRKGLETAIYYDDDKWRLFA
                     GYAYINATFRDAIALSSPNNPFADADGLIFVQPGDHLPSIPQHRFKAGAEYSILPQWK
                     VGANLVAFSGQYFAGDESNQNPKLPPYWVVNLHTTYQVTKNFEAFALVQNLF"
     gene            complement(2315..2950)
                     /locus_tag="VIY07_19705"
     CDS             complement(2315..2950)
                     /locus_tag="VIY07_19705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEY6384019.1"
                     /translation="MSASVLIVDDHPILLQGCRRILEDIGIEAIFEAPDVVAGYRLFL
                     RHSPDMTIVDLSFQGSSLAGLALIQRIKRFDRRARVLVLSMHSDPIIVSRALQAGAMG
                     YIIKDTATEDLITAIESVLSGKKYLSDELARKMAFAGIGVTGGRLADLTPRELQTLGL
                     LAEGKAYGSIAADLNVSYKTVVNTCWQLRQKLEAKNLPDLVRAAIQLLNAK"
     gene            complement(2947..>4259)
                     /locus_tag="VIY07_19710"
     CDS             complement(2947..>4259)
                     /locus_tag="VIY07_19710"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEY6384020.1"
                     /translation="ARKSTRIEINAAMNLAEALIRDAIPTVEKSDAPREALASIPTQL
                     GSIRHIRISVRETSDLGTESGSPKGTMSQEKIFDVRPSAPGWFVAFIAPPVDTRTVPI
                     ISQGRDLGSIVISSAPGDEIAEVWENATALATAALLIGIASIAILHFLFGRVLAPLKS
                     LANGLLDLGRSDYNVRLPQPRARELAVIAEHFNGLATVLGSMRVENRRLSKRLITAQD
                     DERRQTALDLHDEVGPHLFGLKTNTTLLANTLSGTPLEGRAREMLAMVEGLQSINRGI
                     LNRLRPMALGQVPVTELLSALVAERDAQQSAVSFDFFSEGLHPTYGESIDLTLYRCVQ
                     ESLTNVIRHAKARQSRVSVEHRADQNRGTDPPAWVVLTIADDGCGVDSAVLPGNGIQG
                     MQERVQALGGTFKLKGSMNRGTIVHIEIPVMDMTSIHALRMSMP"
BASE COUNT          880 a         1146 c         1292 g          941 t
ORIGIN      
        1 cgaacaggtt ttgaaccagc gcgaacgctt cgaagttttt cgtgacctgg taagtcgtgt
       61 gcaggttgac cacccaataa gggggcaact tgggattctg attggactcg tcgccagcga
      121 aatattgccc gctaaaagca acgagattgg cgccgacctt ccactgaggc aaaatcgagt
      181 attctgcgcc tgctttgaaa cggtgctgag gaattgacgg taggtggtcg ccgggctgga
      241 cgaaaataag accatcagcg tcagcaaagg ggttgttcgg cgatgacagg gctatggcgt
      301 cgcggaatgt agcgttgatg taggcgtagc ccgcgaacag cctccacttg tcatcgtcgt
      361 agtagatagc cgtttccagg cccttgcggc gggtgccgcc gacgttctgg aaaaagccgc
      421 gtccggtaat cgtgctcggc acgttcatga tgtcgtcttg cgtgtcggtg agataggcgc
      481 cgacattcca ggtcagcgtg cgtttgtctc ccaggttgtg tcggccgcgg aagccggctt
      541 cccaagtcct accaacgacc tgctgcaacg gcgggtcgga caccaggaaa gcatcaagca
      601 gacagggccg ggctggatcg gcgcagccca gctccgacgg cgttggcgcg cggttcgatt
      661 ccgaatatcc ggcgtaagtg gtgacctgcg gcgtgatctt gtaagtcgcc ccgataacgg
      721 gattgaagcg ctgaaagttg ttggtgccat tcaacgcggt gccgatctgg tcttcgagtt
      781 ggatgttggc aatgttgaac cgaccgcctg cggttactga gagctggcgc gtgatatcaa
      841 aggtgtcggt tacgtagagg ccagtgtagg tgttgcgtgt gatgagattg acaggcgcta
      901 caaggccgtc gggctgattg acaatgactc ccgtgccggt gacgaagaga tcgctcccca
      961 cggtgccaag ctcgctcgag gcctggaaat tggctcggcc gcggtcgatg ctcgcaccga
     1021 cgacgaagtg attttggcgt ccccagactt cgctggtgct ggtcaattgt gccgaggcac
     1081 cgtaggcgtc agccttggtc tgggtgcgat cgatggagcc ggccaaattg ccattgagaa
     1141 ttgaagtcgg gatgccgccg ccattcagcg ggtcgtcatc aaggcaaagg atcgtcggat
     1201 cgccggggca ttcttctacg tcgctggtat tgccgtcgtc atgtttctgg cggaagccgc
     1261 ggtaataggc gttcgccttg atattcagcc tgtcgctgaa gttgtggctg ccgaccgcgt
     1321 ttacaaagtt caggcggttt ttgtaggtct gcggcgttgt gtaaatcgag ctccagcgtt
     1381 gatcgaggag ctggatgggt gtcgctgcgg cggcaccgaa actgttttgg gctcccgtgt
     1441 agttgatgtg gaattccgat gtctcactgc gcgcgccgat atctgcaaag acacggcgca
     1501 acttcgacgc tgactggtcg cgccaaccgt catcgttgag accatcagcc gccacatagg
     1561 ccgcaacgtt gccgaattgc tgccccgact gcatggtgac cgcgcggcga ccgaaagaac
     1621 cgccgcggaa ctcggcttcg ctgccatgat agttgaagcc gtttttcatc tggatcgcga
     1681 tcgcgccgcc cagggcgttc aggccgtagg cgggatcgtt gggcacgaca tccaggcgat
     1741 ggatcgcata gctcgggatg aagtcccagt tcacggtatc accgaacacc tcgttgacgc
     1801 gcgcgccgtt ctggtagacg gcaaggccct gcggcgttcc gaccgtcggc gaggcgagaa
     1861 aaccgcgaaa ctgcacatcc ggttggaaag gatttaccgc ggtgtcgttg ttgaacacgc
     1921 tcggtacacg ctgaagcagg ctgtcgggca cgctgttgga tttggcgtga tcaaagtcct
     1981 gcggcgtcaa tgtctgggtg ttggcaggca ccttgtcgcg gtcgatggca gtaatatcgg
     2041 ccggtccgcc tgcgccgggg gctgtcgaca gcggagtggt gccgatgaca tcgatcgggg
     2101 gcaactgtat gggagcttgc gcggaagccc tgtgcagggc gagcgcggtt accgccataa
     2161 ccacgacacc ggccgtcgcg aatgcatttg cgatctttgc cacccgtaac cccgccatga
     2221 tgcgcggcgg agtctagcct aagaagtcta tttcagtacg tctcgggaac cacttgcact
     2281 tctatccggg atattttggc aaaggaatgg ggcgctactt tgcgttgagc agttggattg
     2341 ccgcgcgcac caggtccgga aggttcttcg cttcaagctt ttgtcggagc tgccagcaag
     2401 tattgacgac ggtcttgtaa ctgacgttca ggtctgccgc gatcgaaccg taagcttttc
     2461 cctcagccaa aagaccgaga gtttgcaact cgcggggggt gagatccgcg aggcgtccac
     2521 ctgtgacacc aattcctgca aatgccattt ttctggcgag ctcatcgctg aggtattttt
     2581 tgccgctgag aacagattcg attgccgtta taagatcttc ggtcgcggtg tctttgatga
     2641 tgtaacccat tgcaccggcc tgcagggcac gcgaaacgat gatcgggtcg ctatgcatac
     2701 tgagaacaag cacgcgcgcc cggcgatcga aacgcttgat acgctggatt agggcaaggc
     2761 ccgcgagact gcttccttga aatgacagat cgacaatcgt catgtcgggt gaatgacgga
     2821 gaaataaccg atatcccgcg acgacgtcag gtgcctcgaa gatcgcttca atcccgatat
     2881 cctccaggat acgccggcat ccttgcaaaa gaatgggatg atcatcgacg atcaatacgc
     2941 tggcgctcac ggcatcgaca tcctgagcgc gtgaatcgag gtcatatcca ttaccgggat
     3001 ctcgatgtgt acaattgtgc cgcggttcat cgaacccttc aatttaaatg tgcctccaag
     3061 ggcctgtacc cgttcctgca tcccttggat gccatttcct ggcagcactg cactatcgac
     3121 gccgcatccg tcatcagcaa ttgtaagaac cacccacgcc ggggggtcgg tacctctgtt
     3181 ttgatcggcc cggtgctcca ctgatactcg gctctgtcgc gctttggcat gacggataac
     3241 attggtgagg ctctcctgca cgcagcgata aagagtcaga tcgatcgact cgccataggt
     3301 aggatgcagg ccctcggaaa aaaaatcgaa agatacagcc gattgctgcg catcgcgctc
     3361 cgcaacaagg gcagacagca actcggtgac agggacttgg ccaagtgcca taggccgcaa
     3421 ccgatttaaa atgccccggt tgatggactg gagaccttcg accatcgcca gcatctcgcg
     3481 tgctcgccct tcgagcggtg ttccgcttaa ggtgttcgcg agtaatgttg tgttggtctt
     3541 gaggccaaac aggtggggac cgacttcatc gtgaaggtcg agagccgttt gacgacgttc
     3601 gtcgtcttgc gcagtaatca ggcgtttact taaccgtctg ttctcgactc tcatcgagcc
     3661 cagcacggta gcaagcccat tgaagtgttc ggcaatgacg gccagctccc gagcccttgg
     3721 ctggggcagg cgaacattgt agtcgctccg tccaaggtca agcagaccgt tcgccaaaga
     3781 ttttagcgga gcaagcacgc gaccgaaaag aaaatgtaga atcgcaatgc tggcaatccc
     3841 aatgaggagc gctgccgtag cgagcgccgt cgcattttcc catacttcgg caatttcatc
     3901 gccgggcgcg ctagaaatca caatggagcc caagtcacgc ccctgcgaaa tgatcggaac
     3961 ggtgcgtgtg tcgactggcg gagcgatgaa ggcgacgaac caaccgggcg cggatgggcg
     4021 aacgtcaaat attttttctt gagacattgt ccctttcggt gagccggact cggtgcctaa
     4081 atcagacgtt tctcttaccg aaattcgaat atggcggatg gagccgagct gagtcgggat
     4141 tgatgcaaga gcctcacgag gtgcatcgct cttttcgaca gtcggaatcg cgtcgcgaat
     4201 tagtgcttcg gcgaggttca tcgcagcatt aatttcaatg cgcgttgatt tcctggcct
//
LOCUS       DATDHO010001006         2908 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_97780, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001006 DATDHO010000000
VERSION     DATDHO010001006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2908)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97780"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1041)
                     /locus_tag="VIY07_19715"
     CDS             complement(<1..1041)
                     /locus_tag="VIY07_19715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEY6384021.1"
                     /translation="MTYDQTRDSEQLSYLDDAIAEFISRYNFNVQSTGRRTIIFFPGG
                     MGSRLLRATTPEPDGPPFFYDTVWLDGSIAFGAASHLRMQHDIDYQQQVVVPDGPLDL
                     FILRPYEDFVEWCENNSVDYFIFGWDWRRDPQKSVDFFLNVFMPRFEQRVSGCVPNPL
                     AHLSLVGHSFGGMIVKLILNEQNNPYVQLVHSAVTVATPFYGYGGQLGRYFIGDPDLY
                     LFYSKRNLVRIVSSLAGGYTLMFLDEETFQRDGAALGNDPQFPLPNYPVLDAITGARA
                     DPYAPGSNGGMVRYPQNYGFNPVHLARAKLMCQQVAAPFASPAINGKFFNIRGVQTDN
                     NAAIRNDTVNNQT"
     gene            1239..1970
                     /gene="pxpA"
                     /locus_tag="VIY07_19720"
     CDS             1239..1970
                     /gene="pxpA"
                     /locus_tag="VIY07_19720"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006337205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEY6384022.1"
                     /translation="MRMTINCDMGEGFGLYRLGDDAAIMPFIDLANVACGFHASDPTI
                     MRTTVRLAKKHAVKVGAHPSLPDLQGFGRRAMVISPAEVTDLVTYQVGALKAFLDVEG
                     IPLNHVKPHGALYGMAARDEKVAAAIADAVLPFEVPILGMAFTAHESTYRTKGIELIP
                     EFYADLEYDGDGNLILSRVHDAVDPVKAAARVLRVMREQVVTTTAGKDIPVKAATVCV
                     HSDTPSAAAIAAEVRRALERQAAVS"
     gene            complement(1990..>2908)
                     /locus_tag="VIY07_19725"
     CDS             complement(1990..>2908)
                     /locus_tag="VIY07_19725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AraC family transcriptional regulator
                     ligand-binding domain-containing protein"
                     /protein_id="HEY6384023.1"
                     /translation="ANLTLQQVRDTNLRLSARDQIRFLNFVADALQDDLLGFHLAQSP
                     DLREFGFLYYVSASADNLGDALHQLARYASIANEGVALRCVGGKHFGIAYRYIGVSRH
                     LDRHQIECFTAALVRLCRQLTGVRVVPTQVRLAHRREAKSTEMTEFFGAEVEFGAAAD
                     EFLLSPATRDLPVVSADHYLNKILTGYCEEALSQRPAKRSPFRSSVENAIVPLLPHGK
                     ARADIISRRLGVSQRTLARRLSSEQMSFSGVLENLKMDLAERYLADDALSISQVAWLL
                     GYQEVSSFTHAFKRWTNKTPRQMRTQKAA"
BASE COUNT          651 a          785 c          860 g          612 t
ORIGIN      
        1 tgtctgattg ttcacggtgt cattgcggat agcggcgttg ttgtcggttt gcacgccccg
       61 gatattgaag aacttgccat tgatggccgg cgaggcaaag ggggcggcaa cctgctgaca
      121 catgagcttt gcgcgcgcca aatgcacggg gttgaagccg tagttctgcg ggtagcggac
      181 cattccgccg ttgctgcctg gagcataggg atcggccctt gctccggtga tcgcatcgag
      241 aaccggataa ttgggcaacg gaaattgggg atcgttgccg agggcggcgc catcgcgttg
      301 aaacgtctcc tcgtcgagga acatcagcgt gtatcctccc gccagagaag agacgatccg
      361 caccaggttc cgcttgctgt aaaaaaggta aagatcggga tcgccgatga agtaacgtcc
      421 cagttgtccg ccatagccgt agaacggcgt cgccaccgtg acggcggagt gtacaagttg
      481 gacatatgga ttgttttgct cgttgaggat cagcttgaca atcatgccgc cgaagctgtg
      541 accgaccagg gacaagtgcg cgagcgggtt ggggacgcat ccgctgacgc gctgctcgaa
      601 tcgcggcatg aaaacattca ggaaaaagtc gacgctcttt tgtggatccc gccgccagtc
      661 ccacccgaag atgaaatagt cgacactatt gttttcacac cactcgacaa aatcctcgta
      721 tggcctcagg atgaatagat cgagcgggcc atccggcact actacctgtt gctggtaatc
      781 gatgtcgtgc tgcatccgca ggtgcgatgc agccccgaat gcaatggagc catcgagcca
      841 taccgtatcg tagaaaaagg gagggccatc aggctcgggc gtggtggcgc gcagaagccg
      901 cgatcccatt ccgccgggaa aaaagattat cgtccgacga cccgtcgact ggacattgaa
      961 gttgtagcgg ctgatgaatt cggcgattgc gtcgtcgagg tacgacagct gctcgctgtc
     1021 cctcgtttga tcgtaggtca tgcagcgccc ctctctgcag gtggctcgac ccaaactcag
     1081 aactatacgg agcgctctcc tttgccacaa gcaggtgcct gatcggtcga gatatccgcg
     1141 tcgtaaaaag cgactgtcgg taaaaggtgc tgggtcgcat tccgtttgct accgttcgtg
     1201 cggcaatgtt ggaatagcgg accaaaaagg tcagttacat gcggatgaca ataaattgcg
     1261 acatgggcga gggatttggg ctctatcggt tgggggacga tgcggcgatc atgcctttta
     1321 ttgacctcgc aaacgtcgcc tgcggtttcc atgcttctga tcccacgata atgcgcacca
     1381 cggtacggct tgcgaaaaag catgccgtca aagtgggggc gcacccgtcg ctgccggacc
     1441 tgcaaggttt cggacgaagg gccatggtca tctcaccggc agaagtgacg gatctggtaa
     1501 cgtatcaggt cggcgcgttg aaggcgtttc tcgatgtcga aggcattcca ctcaaccatg
     1561 tcaagccgca tggagcgcta tatggcatgg ccgctcgcga tgagaaggtt gcagcggcga
     1621 tcgccgatgc cgtgcttccg ttcgaagtgc ccatccttgg aatggcattc acggcccacg
     1681 agtccactta caggaccaag ggcatcgaac tcattcccga attttatgcc gaccttgaat
     1741 atgacggaga cggcaatcta attctcagtc gtgtgcacga cgcggtggat ccggtgaaag
     1801 ctgccgcgag ggtgttgcgc gtcatgcgcg agcaagttgt cacgacgact gccggaaaag
     1861 acattcctgt caaagcagcc accgtgtgtg tgcactcaga cacgccatcc gctgcagcta
     1921 ttgccgcaga ggtaagacgt gcccttgaaa gacaggctgc cgtgtcgtga gcacagtctc
     1981 gtcaccgggc tacgcggcct tttgcgtgcg catctgccgc ggtgttttgt tggtccatcg
     2041 cttgaatgcg tgggtaaagg aactgacttc ctggtaccca agcagccacg ccacctgaga
     2101 aatcgacagc gcgtcatcgg ctagataacg ttcagccaaa tccatcttca gattttccag
     2161 cacgccagaa aagctcatct gttccgaaga aagacggcgc gccagggttc gctgactgac
     2221 tccgagccgg cgtgagatga tatcggctcg cgccttgcca tgcggaagca atggcacgat
     2281 ggcgttttca acgcttgagc ggaatggact gcgtttcgcc ggccgctggg acaatgcctc
     2341 ttcacaatag ccagtcagta tcttgttcag gtagtggtcg gcacttacga cgggtaaatc
     2401 tcgcgtagcg ggcgaaagca agaattcatc agcagcggca ccaaactcga cttcggctcc
     2461 gaagaattca gtcatctcgg tggatttcgc ctcgcgacga tgggccagcc tgacttgggt
     2521 tggcacaact ctaacgcccg tcaattggcg acacaggcgg acgagagcgg ccgtgaaaca
     2581 ttcgatctgg tgtcgatcca ggtggcgact gacgcctatg tagcggtagg caatgccaaa
     2641 atgtttgcca ccaacacacc tcagcgcgac gccttcattg gcgatcgatg cgtaccgggc
     2701 aagttggtgc agggcatcgc ccaaattgtc agctgacgcg gaaacataat agaggaatcc
     2761 gaactcgcga agatccggcg actgcgcaag atggaatcca agcaggtcat cttgcagtgc
     2821 gtcggcaaca aaattcagaa atctgatctg atcacgagcg ctgagtcgca ggttcgtatc
     2881 cctgacctgc tgaagcgtga gattcgct
//
LOCUS       DATDHO010001007         4739 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_97936, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001007 DATDHO010000000
VERSION     DATDHO010001007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 4739)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4739)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4739
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_97936"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..614
                     /locus_tag="VIY07_19730"
     CDS             <1..614
                     /locus_tag="VIY07_19730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY6384024.1"
                     /translation="LGDFISRRQGDRVALILFGSKAYIQVPFTQDLQTARTLLDQTEV
                     GMAGQQTVIGDSIGLAIKTFETSKARQKLVILLTDGNDTASRVPPEHAADIARQNGIV
                     IYTIGFGDPNVTGENRVDLGTLRQVASATQGQFFRAENGAELQTIYADIDRLAPVKLQ
                     TLTWRPRMPLYQWPLGAAVILGLALWCLLLTVSIFRWRPAGHA"
     gene            607..2130
                     /locus_tag="VIY07_19735"
     CDS             607..2130
                     /locus_tag="VIY07_19735"
                     /inference="COORDINATES: protein motif:HMM:NF024909.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HEY6384025.1"
                     /translation="MPDALSFDFHFLRPLWLTALIPVAIVVLLVIRRQRPEAQWGDLI
                     APNLLKHLLVQPDRRWRINPLYLVASGLVVSIVALAGPTWRRELPPFVEDKAPLMIAL
                     SVSPSMNERDVAPSRLERAKQKVRDLLAARAGARTGLIAYSGTAHLVMPMTDDRAVIE
                     PFLAALTTALMPVPGNNAEPAMALAAKVMANESVAGTILVVADGLGGDPVAVRRAAGR
                     NDVLMLSVAPPQSDLPGLQSRSVQVSVDSADIRSLERRIEISYESAQSAAFGTRWRDE
                     GYWLLIPALLLGLLWFRRGITVAWVIALLIVQQPGPAGAAEMPWFRSLWLTPDQQGRI
                     AFDRGDYAASKQLFADPMWRGIAAYRAYDFLAAAESFRKVEGPAGRFALGNAEAQNHA
                     YEKAIKAYDDVLAAEPNNAAAKHNKEIVEAALEAQEEKRRKQEKGEAPPDEKADEMRV
                     DPKQKGGKRIQVQADDLTTPGAAEAWMRQVQTSPADFLKLKFAIQAASPSPPVEPPR"
     gene            2127..3524
                     /locus_tag="VIY07_19740"
     CDS             2127..3524
                     /locus_tag="VIY07_19740"
                     /inference="COORDINATES: protein motif:HMM:NF024973.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BatD family protein"
                     /protein_id="HEY6384026.1"
                     /translation="MTRIAAHLFLLALLTPVASAQQQTVPEPIVRTTIDPPRVIVGQK
                     ATLRVLVLGPNYMPAPPVIPDFQLRNAVTQPLGAVNQVETHDGVTYAGVQYEHAIYPQ
                     EPGAFAIADQQVTVTYAAEPPKSTQLTIPLPRLAFEAFIPEAAQNLDPFIAASALTVE
                     QAVKQSAQNLKVGDSVTRAVTIKAEGTPAMLLPPTTFANIDGLEVYPGQPSVTDNLDR
                     RTGSSTASRVDEATYMLQAAGEYTLPALDIAWWNVRDSKIEHTRADAVALHVADNPAL
                     RTGGAVDTSRARRDWRAVFDWILDHLLISAIALVAFGALLWLAPLAVRAVRQFAAQRR
                     SAYLNSEACWFARLKAAGHDRDPAKVYFALLNWLQRFEPVAPAGNLGALKQAAADPEL
                     DREIASIETALFAPQSGTAPNWSPRRLLKRVSLVRRRLLRSAPAQPRQKILPDSLNPV
                     MSRPQINPLRRPVAR"
     gene            3544..4425
                     /locus_tag="VIY07_19745"
     CDS             3544..4425
                     /locus_tag="VIY07_19745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2 family protein"
                     /protein_id="HEY6384027.1"
                     /translation="MSLAKFAKKYRVDDPDKFRIEEWDPADTGKLDIDKNEAKDLLAE
                     GVERLSDLQEKLYAQDRWAMLLIFQAMDAAGKDSVIEHVMKGVNPQGCEVHSFKQPSQ
                     EELDHDFMWRTTRRLPERGRIGIFNRSYYEEVLAVRVHPGLLEKEKMPKKLVTKDIWK
                     ERFKDIRAFERYLARNGTVILKFFLHVSKEEQKRRFLERIDNPAKNWKFAMGDVEERR
                     LWDKYMAAYEDMIRNTSRPEAPWFVVPADNKWFTRLVVAAEVVDALDSLDLKFPSVTG
                     EVHGELAKARKILMKSD"
     gene            4515..>4739
                     /locus_tag="VIY07_19750"
     CDS             4515..>4739
                     /locus_tag="VIY07_19750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HEY6384028.1"
                     /translation="MSKSIVPSATPISEARDPGHRAHNSPVIKRSIIRNGHKSSVSLE
                     DEFWDGLREIAAREGVTVSALVATIDHGPNR"
BASE COUNT          959 a         1471 c         1437 g          872 t
ORIGIN      
        1 tgctcggcga tttcatttca cgccggcaag gcgaccgtgt cgcgctgatc ctgttcggca
       61 gcaaggccta catccaggtg ccgttcactc aggacctgca gaccgcgcgc accctgctgg
      121 atcagaccga agtcggcatg gcgggccagc agacagtcat cggggacagc atcggcctcg
      181 ccatcaagac attcgaaacg agcaaggccc ggcagaaact cgtgatcctg ctcaccgatg
      241 gcaatgacac cgcgagccgg gtcccacccg agcatgccgc cgacatcgcg cgtcaaaatg
      301 gcatcgtcat ctacactatt ggcttcggtg atccgaacgt gacaggcgaa aaccgtgtcg
      361 atctcgggac cttgcgccag gtcgccagcg cgacgcaggg acagtttttc cgcgcagaga
      421 acggggccga gctgcagacg atctatgccg atattgaccg gcttgctcct gtaaagctgc
      481 aaacgctgac ttggcgtccg cgaatgccgc tgtaccaatg gccgctcggt gcggccgtta
      541 ttctcggcct cgcgctttgg tgtctattgt tgaccgtgag cattttccgc tggaggcctg
      601 cgggacatgc ctgacgcttt gtccttcgac tttcattttc tgcggccgct ttggctgacc
      661 gcgctgatcc ccgttgccat agtcgtttta ctggtcatcc gccgtcagcg acccgaggcg
      721 caatggggtg atttgattgc gcccaatctt ctcaagcatc tgctcgtcca gcccgaccgg
      781 cgctggcgca tcaatccgct ttatctggtc gcgtcaggtc tggtcgtgag catcgtcgca
      841 ttggcaggac ccacgtggcg gcgcgagctg ccgcccttcg tcgaggacaa ggcgccactg
      901 atgatcgcgc tgtcggtttc tccatcgatg aacgaacgcg acgtggcgcc ctcgcggctc
      961 gaacgcgcga agcagaaagt gcgtgacctg ctcgcagcgc gcgcgggcgc tcgcaccggg
     1021 ctcatcgcgt attcaggaac ggcacatctc gtgatgccga tgaccgacga ccgcgccgtg
     1081 atcgagccct ttcttgcggc gctgacaacc gcgctgatgc cggttcccgg gaataacgcg
     1141 gagccggcga tggctcttgc ggcaaaagtc atggcaaatg aatcggtcgc cggaacgatt
     1201 ctcgtggtcg ccgatgggct gggcggcgat ccggtcgctg ttcggcgtgc ggctggccga
     1261 aacgatgtgc tgatgctgag cgtcgctcca ccgcaatccg accttccggg tctacagtcg
     1321 cgttcggtgc aagtcagcgt cgatagtgcc gatatccgct cgctcgagcg ccggatcgag
     1381 atcagctatg agtccgcgca atcagctgcg ttcggcacgc gctggcgtga cgaaggctat
     1441 tggctgctca tccccgcact cttgcttggg ctgctgtggt tcaggcgcgg catcaccgtg
     1501 gcgtgggtca tcgccctgct catcgttcag caaccagggc ccgccggcgc ggcggagatg
     1561 ccctggtttc gcagcctgtg gctcacgccc gatcagcaag gccgcattgc gttcgatcgc
     1621 ggagattacg cggcgtcaaa gcagcttttc gccgacccga tgtggcgtgg catcgccgcc
     1681 tatcgcgcct atgattttct cgccgccgca gaaagcttcc gaaaagtcga agggccagcc
     1741 ggccgtttcg cgctgggcaa tgccgaggcg caaaatcacg cctatgaaaa agcaatcaag
     1801 gcctatgacg acgtgctggc cgcagaaccg aacaatgcgg cggccaagca caacaaggag
     1861 atcgtcgagg cggccctcga agcacaggaa gaaaagcgtc gcaagcagga aaagggagaa
     1921 gctccgcctg acgagaaagc cgacgagatg cgcgtcgatc caaagcagaa gggcggcaag
     1981 cgcatccagg tacaggccga tgatttgacg accccgggcg ccgccgaggc ctggatgcgc
     2041 caggtgcaga cttcgccggc ggatttcctc aagctgaaat ttgccattca ggcggcaagc
     2101 ccgagtccgc ccgtggagcc gccgcgatga cgcgcatcgc ggcacatctc ttcttgctgg
     2161 cgctcttgac gccggttgca tcggcgcaac agcaaactgt gcccgagccc atcgtgcgga
     2221 cgacgatcga tccgccgcgg gtcatcgtcg ggcaaaaggc tacgctgcgc gttcttgtgc
     2281 tgggcccgaa ttacatgccg gcaccgccag tgattccgga tttccaactc cgtaacgctg
     2341 tcacgcaacc gctgggtgcg gtcaaccagg tggaaacgca tgacggcgtc acctatgccg
     2401 gcgtgcagta tgaacatgcc atttatccgc aggagccggg cgccttcgcc attgccgacc
     2461 agcaggtcac agtgacttat gcagccgagc ctccaaaatc cacccaactc acgatcccgc
     2521 tgccgcgcct cgcgttcgag gcgttcattc ccgaagcggc gcagaatctc gatcccttca
     2581 tcgcggcaag cgcgctgacc gtcgagcagg cggtgaagca atcggcgcaa aatctcaagg
     2641 ttggcgattc cgtcacccgc gcagtgacga taaaggcgga gggcacacct gccatgctgc
     2701 tgccgccaac gacattcgcc aacatcgacg gtctcgaagt ttatccgggc cagccgtcgg
     2761 ttacggacaa tctcgaccgg cgcaccgggt cttcgaccgc cagccgcgtt gacgaagcga
     2821 cctacatgct tcaggcggcc ggtgagtaca ccctgcccgc gctggacatc gcctggtgga
     2881 acgtccgcga cagcaagatc gagcacacac gggcagacgc cgtcgccctg cacgtcgccg
     2941 acaaccctgc gctgcgcacc ggcggcgcgg tcgacacaag ccgggcccgc cgcgattggc
     3001 gcgctgtttt cgattggatt ctcgaccacc tgctgatttc ggccatagcc ctggtcgcgt
     3061 ttggtgcatt gctctggctt gcgccattgg ccgtgcgggc ggtccggcaa ttcgcggcac
     3121 aaaggcgcag cgcctatctc aattcggagg cttgctggtt cgcgcgactg aaggctgccg
     3181 ggcacgatcg cgatccggca aaggtctatt tcgctttgct gaactggctg cagcggttcg
     3241 agccggtggc gccggcgggc aatctcggtg ctttgaagca ggctgcggcg gatcccgaac
     3301 tggatcgcga gatagcaagt atagagacag ctctgtttgc gccgcaaagc gggacggcac
     3361 cgaactggtc gccgcgccga ctcctcaaga gagtgagcct cgtccgtcgt cggctgctgc
     3421 ggtcagcgcc tgctcagcct cgccaaaaga tactccccga cagccttaat cctgtaatgt
     3481 cacgcccgca gattaatccg ctgcgacgcc ccgtcgcccg atgaccgatg caagaggcac
     3541 cgcatgagcc ttgccaagtt cgcaaaaaag tatcgggtcg atgaccccga caaattccga
     3601 attgaagaat gggacccggc cgacaccggc aagctcgaca tcgacaagaa cgaagccaag
     3661 gacttgctcg ccgaaggagt cgagcgcctg tcggacctgc aggagaagct ctatgcgcag
     3721 gaccgctggg cgatgctgct gatcttccag gctatggatg cggccggcaa ggacagcgtg
     3781 atcgagcacg tcatgaaggg cgtgaatccg caaggctgcg aggtgcattc cttcaagcag
     3841 ccgagccagg aggagctcga tcacgatttc atgtggcgaa cgacacgtcg gcttccggaa
     3901 cgcggacgga tcgggatctt caaccggtca tactacgagg aagtcctggc ggtgcgcgtc
     3961 catcctggat tgctcgagaa agaaaagatg cccaagaagc ttgtcaccaa ggacatctgg
     4021 aaggagcgct tcaaggatat ccgcgcattc gagcgctatc ttgcacgcaa cggcacagta
     4081 atcttgaaat tctttttgca tgtttccaaa gaagagcaga agcgccggtt tctggaacgg
     4141 atcgacaacc cggccaagaa ctggaaattc gccatgggcg acgtcgagga gcgaaggctc
     4201 tgggacaagt acatggccgc ctacgaggac atgatccgga acaccagcag gccggaagcg
     4261 ccatggtttg ttgtgcccgc agacaacaag tggttcaccc gtctcgttgt cgccgcggaa
     4321 gtggtcgacg ctttggacag ccttgatctc aaatttccgt cagtaacagg tgaggtgcac
     4381 ggcgaactgg ctaaggcacg aaaaatattg atgaaatccg actagcccca tcgacgttgg
     4441 cccatggtcc aactcgatca tcacacctgc gcggcgttta atgccgaaat cgaaaaacca
     4501 ggtgtggggt taaaatgtca aagtcaattg tcccgtctgc tacgccgatc tccgaggctc
     4561 gcgaccctgg ccaccgcgca cacaattcac ccgtcatcaa gcgctccatt atacgcaacg
     4621 gacacaagtc gagcgtttcg ctggaagacg agttttggga tggattgcgc gaaatcgcag
     4681 cgcgcgaggg cgtgaccgtg tccgcactgg tcgcaaccat cgaccacggc ccgaacagg
//
LOCUS       DATDHO010001008         1854 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_98360, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001008 DATDHO010000000
VERSION     DATDHO010001008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1854)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1854)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98360"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..599)
                     /locus_tag="VIY07_19755"
     CDS             complement(<1..599)
                     /locus_tag="VIY07_19755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid II flippase MurJ"
                     /protein_id="HEY6384029.1"
                     /translation="MIERILTVGGFTLLSRISGFVRDIILAAVLGAGPVADAFFVALR
                     LPNHFRAIFAEGAFNAAFVPAYARIREEGGAVRAGQFADRIFTLLLASQIVLLAIALI
                     FTPAVISVLAPGFSRDPQRFALAVELTRITFPYLLLVTLVTLYSGQTCHASAAASHAP
                     TPSSPSARGSRQTSARGRPSSPPRASTSSPIRSTSPSCAG"
     gene            741..>1854
                     /locus_tag="VIY07_19760"
     CDS             741..>1854
                     /locus_tag="VIY07_19760"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR01479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HEY6384030.1"
                     /translation="MPSPIIPILLAGGAGTRLWPVSRDAFPKQFLPLVGDRSTYQETL
                     LRVNDSIFAPPIVITGPNFHFFAQRQAEEVGVPATIVIEPVRRDSGPAIAAATALASK
                     RDPQAVVLALAADHIILDLEAFRATCLAGRAAAEAGRIVTFGIKPTEPKTSYGYILPG
                     EEVGDGGVYTVKRFVEKPDSTTAARYVSEGYLWNSGNFLFRADVLLAELERLEPEMAA
                     AIKASVAGAATDLDFLRLQPEAFSRAPQKSIDYAVMERTDRAAVVVGQFRWSDIGSWD
                     ALFDITPHDPAGNVLQGPVVTVDSTDCVVHSNERLTALVGVKDLVVVHTSDAVMVVPR
                     SRAQDVRDLVNRLKAENRPEATDHKRVHRPWGYYESI"
BASE COUNT          390 a          569 c          575 g          320 t
ORIGIN      
        1 cccgcgcagc tcggcgacgt cgatcggatt ggggatgatg tcgacgcgcg tggaggcgag
       61 ctcgggcgcc cgcgcgcgga tgtctgccgc gatccgcgag ctgacggcga cgatggcgtc
      121 ggcgcgtgcg aggccgcggc gcttgcgtga caggtttgcc cgctgtagag cgtcaccagc
      181 gtgaccagca gcagatacgg aaaagtgatg cgggtgagtt cgacggccaa tgcaaagcgc
      241 tgcggatcgc gcgagaagcc gggcgcgagc acactgatca cggcgggcgt gaatatcagt
      301 gcaattgcaa gcagcacgat ctggctggca aggagcagcg tgaagatgcg atctgcaaat
      361 tgcccggcgc gaacggcgcc cccctcctcg cgaattcgcg cataggcggg cacaaaggct
      421 gcgttgaaag ccccttctgc aaagatggca cggaagtgat tgggcaaacg aagggcgaca
      481 aagaaggcat cggcgaccgg acccgcgccg agcaccgcgg ccaggatgat gtcacggaca
      541 aacccgctga tacgcgacag cagcgtgaaa ccgccgaccg tcagaatgcg ctcaatcatc
      601 ggaaatatcc ctgctccctg gcagaaagta ccgcggataa acggacttga agcacacagg
      661 gcgatcgcga tagccagata cttggaactg ccttatgaca aattcttgcc ggaacaaagg
      721 gtctccaccg ccagccgctc atgccttcgc caatcatccc cattttgctg gccggcggcg
      781 ccgggacacg gctttggccc gtatcgcgcg acgcatttcc caagcagttc ctccctttgg
      841 tgggcgacag gtcgacctac caggaaaccc tcctgcgagt gaacgactca atattcgcgc
      901 cgccgatcgt cattaccgga ccgaacttcc atttcttcgc ccagcggcag gccgaagaag
      961 taggggtccc tgcgaccatc gtcatcgagc cggtaaggcg cgactccggg cccgccatcg
     1021 cagcggcgac cgcactcgcc tctaaacgcg atccacaggc ggtcgtactc gcgctcgccg
     1081 ccgatcacat cattctggat ctcgaagctt tccgcgccac ctgcctcgcc gggcgcgctg
     1141 ctgcagaggc cggacgcatc gtgaccttcg gcatcaagcc aaccgagccc aagaccagct
     1201 atgggtacat tcttcccggc gaagaagtcg gagacggcgg cgtatatacc gtcaagcgat
     1261 tcgtcgaaaa accggatagc acgaccgcgg cccgttacgt gagcgaaggc tatttgtgga
     1321 attccggaaa ttttctgttc cgcgccgatg tattgctagc ggagctcgag cggctggagc
     1381 cggaaatggc ggctgcgatc aaggcatcag ttgccggggc cgcaaccgat ctcgatttcc
     1441 tgagattgca acccgaagcc ttttcgcgcg cgccgcagaa atcgattgac tatgcggtga
     1501 tggagagaac cgatcgcgca gccgtggtgg tggggcaatt ccgctggtct gacatcggaa
     1561 gttgggacgc gctgtttgac atcactcccc acgatcccgc cggcaatgtc ttgcaaggac
     1621 cagtggtgac cgttgattca actgattgcg tggttcattc caacgaacgc cttaccgcat
     1681 tggtcggcgt caaggacctc gtcgtcgtcc acacctctga tgctgtcatg gtggtgccgc
     1741 gctcgcgcgc acaagacgtg cgcgatctcg tgaacaggct caaggcagaa aacaggccgg
     1801 aggcaaccga ccataagcgg gtgcaccggc cgtggggcta ctacgagtcg atcg
//
LOCUS       DATDHO010001009         7476 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_98573, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001009 DATDHO010000000
VERSION     DATDHO010001009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 7476)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7476)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7476
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_98573"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..204)
                     /locus_tag="VIY07_19765"
     CDS             complement(<1..204)
                     /locus_tag="VIY07_19765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003531570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEY6384031.1"
                     /translation="MTETLRPDICILGGGPGGLSVAAAAAAFAVPTVLIERGKMGGDC
                     LNTGCVPSKSLLAAAKRAELMRNA"
     gene            complement(228..1019)
                     /locus_tag="VIY07_19770"
     CDS             complement(228..1019)
                     /locus_tag="VIY07_19770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HEY6384032.1"
                     /translation="MSADLHADNQSTGFVRRLLLPLAAFVIFAGAAYFMLGEGGLSLE
                     SLVRNRASIDAFVAEHRLLAVMAYIGIYIVAVALSLPGAAFLTIAGGFLFGVILGASA
                     AVVGATIGAAIIFLIARTALGEPLLRRAGPRASQLANGFREDAFSYLLFLRLVPVFPF
                     FLVNLVPAFAGVRLGPFVAATALGIIPAALVYALAGTGLDSVITAQKNLYDQCIVDKG
                     IDCRMVFDPAEVLTPRLVAALVALGLLALLPVVVKYWRGRSRTVT"
     gene            1240..1374
                     /gene="rpmH"
                     /locus_tag="VIY07_19775"
     CDS             1240..1374
                     /gene="rpmH"
                     /locus_tag="VIY07_19775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005980833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEY6384033.1"
                     /translation="MKRTYQPSKLVRKRRHGFRARMSTKGGRKVLSARRGRGRKRLSA
                     "
     gene            1404..1754
                     /gene="rnpA"
                     /locus_tag="VIY07_19780"
     CDS             1404..1754
                     /gene="rnpA"
                     /locus_tag="VIY07_19780"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEY6384034.1"
                     /translation="MERLRQRAEFLAAASGIKVPAAAAFVLQARKRPDAGPARFGFTA
                     SKKVGNAVERNRVRRRLREVVRLSAASRLRAGHDYVLVGRRAALDMPFDRMTKDFEEA
                     LKRVHARRNGVESR"
     gene            1751..3571
                     /gene="yidC"
                     /locus_tag="VIY07_19785"
     CDS             1751..3571
                     /gene="yidC"
                     /locus_tag="VIY07_19785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEY6384035.1"
                     /translation="MNDNKNTLLAIVLSALVLIAWQYYFAGPQEKARQEQLQAQQQKQ
                     NVPAPGQPSQQPSPAGTPQVPGQPSAPAHPGAVDRKAALSGSPRVPIATGSLQGSIAL
                     KGGRIDDLALVKFRETVDPKSPPIVLLSPSGTADPFYAEFGWTGAAGTNVKLPNSETV
                     WKHAGSGALGVGHPVILTYENGEGLEFRRTVAVDDKYLFTIKDEVTNKSSSPVSLYPY
                     ALISRHGTPQTLGYYILHEGLIGVLGESGLQEYTYDSIAKKKVVNFDVVNGWLGITDK
                     YWAAVLVPDTSAHLKARFSTGAIGNLPTYQTDYLLEAQTVAPGATASVNGRLFAGAKE
                     VAVVNDYDKRLKLNRFDLLIDWGWFYFITKPLFIAIDYLYHLVGNFGLAILIITVLIK
                     IAFFPLANKSYASMAKMKAVQPQMMAIRDRYADDKAKQQQELMELYRKEKINPLAGCL
                     PIAIQIPVFFSLYKVLFVTIEMRHAPFFGWIHDLSAQDPTNLFNLFGLIPLDPTVLPL
                     IGPFLHVGLWPLIMGVTMWIQMKLNPAPPDPTQAMIFNWMPLLFTFMLASFPAGLVIY
                     WAWNNLISVLQQSVIMRKHGAKIELFDNIKAMFVKDKPQQ"
     gene            3690..4343
                     /gene="yihA"
                     /locus_tag="VIY07_19790"
     CDS             3690..4343
                     /gene="yihA"
                     /locus_tag="VIY07_19790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HEY6384036.1"
                     /translation="MVAASQFTRAEIEAGRSLFSGQWQFVAAAGTPVSLPPMRGTEIA
                     FAGRSNVGKSSLINALTGRKNLARISRTPGRTQELIFFTNGVGLNVVDMPGYGYAAAA
                     KSKIAAWTELIEAFLRGRSNLARVYVLVDSRHGLKAADEPALDVLGQAAVSHQIILTK
                     CDEVKPAELSPRIADIEAALARRPAAFPTVIPTSSRNTTGIPELRAAIARLLAERGR"
     gene            4385..5281
                     /gene="argB"
                     /locus_tag="VIY07_19795"
     CDS             4385..5281
                     /gene="argB"
                     /locus_tag="VIY07_19795"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEY6384037.1"
                     /translation="MSKAPKIDPQEQARILVEALPHMQRYDEEIVVVKYGGHAMGQEQ
                     MARDFARDIVLLEQTAINPVVVHGGGPQIEAMLKRLGIKSEFAEGLRITDAKTVEVVE
                     MVLAGSINKQIVGYINAAGGKAIGLCGKDGNMVQARKVSRSVVDPDSNIEKVVDLGFV
                     GEPEKVDLTMLNQVIGREMIPVLAPVATSANGGTFNVNADTFAGAIAGALKAKRLLLL
                     TDVPGVLDKSNNLIAQLSVADARKLIADGTISGGMIPKVETCIYALDQGVEGVVILDG
                     KVPHAVLLELLTDHGVGTLMHR"
     gene            5386..6081
                     /locus_tag="VIY07_19800"
                     /pseudo
     CDS             5386..6081
                     /locus_tag="VIY07_19800"
                     /inference="COORDINATES: protein motif:HMM:NF018037.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1036 domain-containing protein"
     gene            6065..6361
                     /locus_tag="VIY07_19805"
     CDS             6065..6361
                     /locus_tag="VIY07_19805"
                     /inference="COORDINATES: protein motif:HMM:NF018037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1036 domain-containing protein"
                     /protein_id="HEY6384038.1"
                     /translation="MSPAAGIASRPANACDRICATTRIDSIVTRRQSTATAAQSGAAT
                     RRWAWGGTVPLCTRDGRFELADHKDCAARGLNSAGFAVIDLTGKPSTTVRFKEP"
     gene            6417..7070
                     /locus_tag="VIY07_19810"
     CDS             6417..7070
                     /locus_tag="VIY07_19810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEY6384039.1"
                     /translation="MFDLDNTLYPHHLNLWQQVDERIRAYVSEFLKVTKDEAFRLQKD
                     YYKRYGTTMRGLMAEHGLEPDDYLEFVHRIDHSPLEPNPGLGAALENLPGRKLILTNG
                     TRKHADAVMQKLEIDRHFEDVFDIAAANLDPKPLPQVYQRFLARHGVDPAKAAMFEDL
                     ARNLETPHALGMTTVLVVPEGQREVFREDWELEGRDAPYVDHLTDNLTGFLEHIVRR"
     gene            complement(7071..>7476)
                     /locus_tag="VIY07_19815"
     CDS             complement(7071..>7476)
                     /locus_tag="VIY07_19815"
                     /inference="COORDINATES: protein motif:HMM:NF016819.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HupE/UreJ family protein"
                     /protein_id="HEY6384040.1"
                     /translation="IGLIAAMMAGVALHLHGASLPAAELLGAITVITLGALLVGDRQM
                     PTGPVLTLFALVGLVHGYALGESIYGAEPTPIYAYLTGLAVVQSAIALVAMKIARGFA
                     GAPVSLSPLRLVGAGIAGVGLAVLVQQVVPTA"
BASE COUNT         1585 a         2296 c         2201 g         1394 t
ORIGIN      
        1 ggcattgcgc attaattcgg cgcgctttgc cgccgccaga agagacttgg aaggaacgca
       61 gccggtgttg agacaatcac cgcccatttt gccgcgctcg atcaggacag tcggcacggc
      121 gaaagcggcg gcggccgcag caaccgacaa cccacccgga ccgccgccga gtatgcagat
      181 gtcgggcctt agtgtttccg tcatactgca agcccccaat cacaacatca agtaacggtg
      241 cgtgatcgtc cgcgccaata tttcaccacc accggcaaca acgcgagcag accgagcgca
      301 acaagcgccg ccaccagccg cggcgtcagc acctctgcgg ggtcgaagac catgcggcaa
      361 tcaatccctt tgtctacaat gcattggtcg tacaaatttt tctgcgctgt aatcacactg
      421 tccaatccgg tccctgccaa cgcatagacg agcgctgccg gaattatacc aagcgcggtt
      481 gccgccacga atgggccaag ccgcactccc gcaaatgcag gaacgagatt gaccaagaag
      541 aatggaaaca cgggcaccag gcgcaggaac aggagataac tgaaggcatc ttcacgaaac
      601 ccgttggcga gctgactggc gcgtggccct gcgcgccgca acagcggctc cccgagcgcg
      661 gtgcgcgcta tgaggaagat gatggcagct ccaattgttg cgcccacaac cgcggcggag
      721 gcaccaagta tcacaccgaa gagaaatccg ccggcgatcg tcagaaaagc tgccccaggg
      781 agggataacg cgactgcgac aatataaatg ccgatatacg ccatcaccgc cagcagtcga
      841 tgctcggcga caaaggcgtc gatactcgcg cgattacgga ccagtgattc aagcgagagg
      901 ccgccctctc cgagcatgaa gtaggccgct cccgcgaaga tgacgaaggc cgccaaaggc
      961 agcagcaacc ggcggacgaa acctgttgac tggttatcgg catgcaagtc tgcggacatt
     1021 gccgccttat acacgacccc ccgacccggt cgggccaatc tcaccgcctt gtgagggttt
     1081 ttgaggtcgc cgaccgatgg acagcagtcg cattgacggg tctaggtccc tcccgtataa
     1141 gccgccgaaa tcgtgtacgg acccgaatga acggggtttg aagacgtttg gaggaccagg
     1201 tcctccttcc caacagcgcg agcggcggag acctgaaacg tgaagcggac ctatcaaccg
     1261 agcaagctcg tgcgcaagcg ccgtcacggt ttccgtgcac gcatgtcaac caagggcggg
     1321 cgaaaagtcc tctcggcacg tcgcgggcgt ggccgcaagc ggctgtctgc ctgagggagt
     1381 aagccgccgc acgaattgct tgcatggagc ggctgaggca acgggcggaa tttctggccg
     1441 cggcgtccgg gatcaaggta ccggccgccg ccgcatttgt gttgcaggca cgcaaacgcc
     1501 ccgacgcggg accggcccgg tttggcttta ccgcgtcgaa gaaggtggga aacgccgtcg
     1561 agcgtaaccg ggtgcgccgt cgcttgcggg aagtagtgcg gctctcggcc gcaagccggc
     1621 ttcgcgccgg acatgactat gtacttgtcg gaaggcgcgc ggcgctcgat atgccgtttg
     1681 accgaatgac aaaggatttc gaagaggcac tcaaacgagt gcatgcaagg cgcaatggcg
     1741 tggaatctcg atgaacgaca ataagaacac cctcctcgcg attgtgctgt cggcgcttgt
     1801 acttatcgcc tggcaatatt acttcgcggg tccgcaagag aaggcccggc aggagcagtt
     1861 gcaggcgcag cagcaaaagc aaaatgtgcc tgcgcccggc cagccttcgc agcaaccctc
     1921 acccgccgga acgccccagg tacccggcca accgagcgct ccggcgcacc ccggagcggt
     1981 cgaccgcaag gctgctttgt cggggtcgcc gcgtgtgccg atcgcgacgg gcagtttgca
     2041 gggttcgatc gcgctcaagg gagggcgcat cgatgacctg gccctcgtca agtttcgcga
     2101 aactgtcgat ccgaagtcgc cgccgatcgt cttgctgtcg ccgtccggca ccgccgatcc
     2161 gttctacgcc gagttcggct ggaccggcgc cgcgggcaca aacgtaaagc tcccgaactc
     2221 cgaaacggtc tggaagcacg ccggctcggg cgctcttgga gtcggccacc ccgtgatatt
     2281 gacctatgag aacggcgaag ggcttgaatt ccgacgcact gtcgcggtcg acgacaagta
     2341 tctgttcacg atcaaggacg aggtcaccaa taagagctcg agccctgtct cgctgtatcc
     2401 ttacgctctg atttcgcgtc acggcacgcc gcaaacgctc ggctactata ttctgcatga
     2461 gggcctgatc ggcgtgctcg gcgagtccgg cctgcaggaa tacacatacg acagcatagc
     2521 gaaaaaaaag gtcgtcaact ttgacgtcgt caacggctgg cttggcatca ctgacaaata
     2581 ctgggccgcc gtcctggtgc ccgacacgtc cgcccacctg aaggcccgtt tttctaccgg
     2641 cgccatcggc aacctgccga cctaccagac cgactatttg ctcgaagcgc aaacagttgc
     2701 gccgggcgcc accgcttcgg ttaatggccg gctttttgcg ggcgcaaagg aagttgcggt
     2761 cgtcaatgac tacgacaaga ggctaaagct caaccgcttc gatcttctga tcgactgggg
     2821 ctggttttac ttcatcacca agccattgtt catcgccatc gattatctgt accacctggt
     2881 gggcaatttc ggcctcgcca tcctcatcat caccgtcctg atcaagatcg ctttcttccc
     2941 gctcgccaac aaatcctatg cgtcaatggc aaagatgaaa gcggtgcagc cgcagatgat
     3001 ggcgatccgc gaccgctacg cggacgacaa ggcgaagcag cagcaggagc tgatggagct
     3061 ctacaggaag gaaaagatca atccactcgc cggctgcctg ccgatcgcaa ttcagatccc
     3121 ggtgttcttc tcgctgtaca aggtgctgtt tgtcaccatc gaaatgcgcc acgcgccctt
     3181 ctttggctgg atccacgacc tttcagccca ggacccgacc aacctcttca acctgttcgg
     3241 tcttattccg cttgatccga ctgtgctgcc tctcattggg ccgtttctgc atgtcggtct
     3301 atggccgttg attatgggcg tcaccatgtg gattcagatg aagctcaatc cggcgccgcc
     3361 cgacccgacg caggcgatga tcttcaactg gatgccactg ctcttcacct tcatgctcgc
     3421 cagtttcccc gccggcctgg tgatctattg ggcctggaac aatctgatct ctgtgctgca
     3481 gcagagcgtc atcatgcgca agcacggcgc caaaattgag ttgttcgaca acatcaaggc
     3541 gatgttcgtg aaagacaagc cgcagcagta gcggcgtcac cagaagcttt ctgatcatgg
     3601 ccgggcttgt cccggccatc cacgtcttta gtgtctgggc cggaaaccgg atgcgcggca
     3661 tgacgccaaa gacagagacc cgcactaaaa tggtggctgc cagccaattc acacgcgccg
     3721 aaatcgaagc tggccgaagc ctcttttctg gtcagtggca gtttgtcgcc gcggcaggca
     3781 cgccagtctc gctgccgccg atgcggggca ctgaaatcgc gttcgccgga cgctccaatg
     3841 tcggcaaatc aagcctgatc aacgcgctca ccggccgaaa aaacctggcg cgcatctccc
     3901 gtacgcccgg tcggacacag gagctgattt tctttaccaa tggcgtgggc ctcaacgtgg
     3961 tggacatgcc cggctatggc tatgccgccg cggccaaatc gaagatcgcg gcatggacag
     4021 agttgatcga ggcgtttctg cgcgggcgaa gcaacctcgc gcgcgtctat gttctggtgg
     4081 attcacgcca cggcctgaaa gcggctgacg agcctgcgct cgatgttctc ggccaggctg
     4141 ctgtcagtca tcagatcatc ttgaccaaat gcgacgaggt gaaacccgcc gagctcagtc
     4201 cccgcattgc cgacatcgaa gcagccctcg cgaggcggcc ggccgccttc cccactgtga
     4261 tcccgacgtc ctcgcgcaat acaaccggta ttcccgaatt gcgggcggca atagcgcgct
     4321 tgttggcgga aagaggccgc tgacacattg tcggacgacc gcgacatcgg ttagaaaccc
     4381 cgcgatgagc aaagcaccca agatcgatcc gcaagaacag gcccgcattc tggtcgaggc
     4441 gctaccgcat atgcagcgct acgacgagga aatcgtcgtt gtgaaatacg gcggccatgc
     4501 catgggccag gagcagatgg cgcgcgattt tgcccgcgac atcgttctgc tcgagcagac
     4561 cgcaatcaat ccggtggtgg ttcatggcgg cggaccgcaa atcgaggcca tgctcaaaag
     4621 gctcggcatc aagtcggaat ttgcggaggg cttgcgcatt acggacgcca agaccgttga
     4681 ggtcgtggag atggtcctgg cgggctcgat caataagcaa atcgttggct acatcaatgc
     4741 ggccggcgga aaggcgatcg ggctctgcgg caaagacgga aacatggtcc aggctcgcaa
     4801 ggtcagtcgc tcggttgtcg atcccgattc caatatcgag aaagtcgttg atctcggttt
     4861 tgtcggtgag cccgaaaaag tcgacctgac gatgctcaat caggtgatcg gacgcgagat
     4921 gattccggtg ctggcgccgg tggcaacttc ggccaatggc ggcaccttca acgtcaatgc
     4981 cgacaccttt gccggcgcca ttgcgggggc gctgaaagcc aagcgcctgc tgctgctgac
     5041 cgacgtgccc ggcgtgctcg acaaatcgaa taacctgatt gcacaactgt cagtcgccga
     5101 cgcgcgcaag ctcattgccg acgggaccat ttccggcggc atgatcccga aggtggagac
     5161 atgcatctac gcgctcgatc agggggtcga gggtgtcgtc atcctcgacg gcaaggtgcc
     5221 gcatgcggtg ttgcttgagc tgttgaccga tcacggcgtc ggtaccttga tgcaccgctg
     5281 agctgtcctc cgttcatttc cgcgcaagcg ggtccccggc acagggcgat tccctgcctt
     5341 cctgatgcca attagcatgg ccccatgatt cgcggtttcc tctcgatgat tgccgtgcca
     5401 atcgccgctc tggcggtttc ccaggctcgc gccgaactta ctttatgcaa ccgcacaagt
     5461 ttccgcgttg aagcggcgat cggcctggaa aagcgtgcga atgtcgccac tcgaggatgg
     5521 tttcgccttg atcccgggca atgccgacta gtgatcgacg ggccgctcga cgccgagatg
     5581 gtctacctgc atgcgcgaac gccgtcggtt tatggcaccg cgccccggcc gcaggacgga
     5641 caggccgact tctgcatacg caatggtgat tttgagattt ccgacgcccg gagttgctcg
     5701 gcaagccagc aggcgcactt cagcgctgcg aagccgtccg agtcgccgaa aggcccggtc
     5761 gtcaatttgg ccgaagaatc cgattacgat gatgtgcagt cgcgccttgc aggcattcag
     5821 cggctgctgg tgattgccgg atacgacgcc tatccgatcg atggcgtgca gggcgcgaag
     5881 acccaggcag ccatcacgaa atttctcaac gatcgcaaac ttccgcccga taccgcagca
     5941 gcaccgaatt tcttcgaaac gctgatcgag gccgcccgca acccggaggg catcggcttc
     6001 acgtggtgca acgatactcg gtatgcggtg atggcttcgc tgggcatcgt tgagatggga
     6061 gcgattgtca cccgcggctg gtatcgcctc gaggccggcc aatgcgtgcg accggatctg
     6121 cgcaacgacc cgcatcgact ctatagttac gcggaggcaa tcgacggcaa cggccgcaca
     6181 atccggagcg gcgacgcgcc gctgggcctg gggcgggacc gtccccttgt gcacgcgcga
     6241 cggacgcttc gaactggccg atcacaagga ttgcgcagca cgcggtctga attctgccgg
     6301 gtttgccgtc atcgatctga ctggcaagcc gtcaacaacg gtgcgattca aggaacccta
     6361 gcctcgtgga aacaaggcgt tcaaagccgc gcggtttcgg ccatgtcgaa acctgggtgt
     6421 tcgatctcga caacacgctc tacccgcatc acctcaattt gtggcagcag gttgatgagc
     6481 gcatacgcgc ttatgtttcg gaattcctga aggtaacgaa agacgaggcg tttcgcctgc
     6541 agaaggacta ctacaaacgc tatggaacga cgatgcgcgg tcttatggcc gagcatggtt
     6601 tggagcccga tgattatctc gagttcgtgc atcgcatcga tcactcgccg ctggaaccca
     6661 atccgggatt gggtgcagca ttggaaaatc ttccgggccg caagctcatt cttacgaatg
     6721 gcacacgcaa gcacgccgat gcagtcatgc aaaaactcga aatcgatcgc cacttcgagg
     6781 acgtgttcga cattgccgcg gcgaatcttg accccaagcc tctcccgcag gtctatcaac
     6841 gcttcctcgc gcggcacggc gtcgatccgg caaaagccgc aatgttcgag gatctggcgc
     6901 gcaaccttga aacaccgcac gccttgggaa tgacgaccgt actcgtggtg cctgaagggc
     6961 agcgggaggt ttttcgcgaa gactgggagc tggagggacg tgatgcgcca tacgtcgatc
     7021 atctgaccga caatctcacc ggatttctcg agcacattgt tcggcgttga tcaggccgtc
     7081 ggaaccactt gctgaaccag tactgcgagc cccactccgg ctataccggc gccgacgagt
     7141 ctcagcggcg aaaggctcac cggcgcaccg gcgaagccac gcgcaatttt cattgccaca
     7201 agcgcgatag cgctttgaac aaccgcaaga ccggtcaggt aggcgtaaat cggcgttggc
     7261 tcggcaccgt atatcgactc cccgagtgcg taaccgtgca cgagtccgac gagagcaaaa
     7321 agcgtaagca cgggacccgt cggcatctgc cgatcgccca ccagcagcgc accgagtgtt
     7381 attacggtga tcgccccgag aagctccgcg gccggcaggc tggctccgtg caaatgcaag
     7441 gccactcccg ccatcatggc tgcgataagg ccaatc
//
LOCUS       DATDHO010001010         1745 bp    DNA     linear   ENV 15-FEB-2024
DEFINITION  MAG TPA_asm: Pseudolabrys sp. isolate SMAG_U280 k141_494564, whole
            genome shotgun sequence.
ACCESSION   DATDHO010001010 DATDHO010000000
VERSION     DATDHO010001010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37962483
            Sequence Read Archive: ERR4661012
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Pseudolabrys sp. (soil metagenome)
  ORGANISM  Pseudolabrys sp.
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae; Pseudolabrys.
REFERENCE   1  (bases 1 to 1745)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1745)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/14/2024 20:16:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 3,966
            CDSs (total)                      :: 3,941
            Genes (coding)                    :: 3,872
            CDSs (with protein)               :: 3,872
            Genes (RNA)                       :: 25
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 20
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 69
            CDSs (without protein)            :: 69
            Pseudo Genes (ambiguous residues) :: 0 of 69
            Pseudo Genes (frameshifted)       :: 28 of 69
            Pseudo Genes (incomplete)         :: 37 of 69
            Pseudo Genes (internal stop)      :: 6 of 69
            Pseudo Genes (multiple problems)  :: 2 of 69
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1745
                     /organism="Pseudolabrys sp."
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_494564"
                     /isolate="SMAG_U280"
                     /isolation_source="soil"
                     /db_xref="taxon:1960880"
                     /environmental_sample
                     /country="Tanzania"
                     /lat_lon="3.076 S 37.353 E"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..972)
                     /locus_tag="VIY07_19820"
     CDS             complement(<1..972)
                     /locus_tag="VIY07_19820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DJ-1/PfpI family protein"
                     /protein_id="HEY6384041.1"
                     /translation="MARKMMHRNRRTTRSPNGHADRVLDVTIVVLEGGYASTAIAPIE
                     VFHSAGVVWNWLQGENLRPRFRVRTASVDGRKVSAAGSLGLTPDCSISDINQTDIIIV
                     SAPGWDVLDHIAENTPLLPWLRKWHARGAYIAGACSGVAFLAESGILDGRRATTHWGV
                     AEIFRKRYPKVRWQPEQFVTEDGRLFCSGGVYASIDLSLYLVEKFCGHEVALQCAKSL
                     LLSMPRGRQSGYSVVQLSRPHSDEKIRQTEEYLQQHFDSDVSIGRLAERVGMGPRNFI
                     RRFKAATGRVPGAYIQTLRVSAAKELLENGTSSIQVVSSKIGYEDIGF"
     gene            complement(965..1384)
                     /locus_tag="VIY07_19825"
     CDS             complement(965..1384)
                     /locus_tag="VIY07_19825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEY6384042.1"
                     /translation="MPQIGKADTGQFCWMDLAATDVESAKLFYGELFGWTSREQAANG
                     GSFIRLQSSSHDIGSVYQLRKELLDKGIASHWTPYVLVKSVKDAASRAALLGGKVIVD
                     PFVVSGVARVALILDSVGAVVGLWEPIQLNMKANGHG"
     gene            complement(1462..>1745)
                     /locus_tag="VIY07_19830"
     CDS             complement(1462..>1745)
                     /locus_tag="VIY07_19830"
                     /inference="COORDINATES: protein motif:HMM:NF025392.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF4242 domain-containing protein"
                     /protein_id="HEY6384043.1"
                     /translation="KSMKRYVIERDLPGVGAMNRAQLKDAAATSNDALTKLAGKVQWD
                     HSYVVDNKTFCIYLADSEAAVREHAKLSGFPATKVTEVKTVIDTLTANS"
BASE COUNT          372 a          535 c          467 g          371 t
ORIGIN      
        1 gaaaccgatg tcctcatatc cgatctttga gctcacgacc tgaatggacg aggtgccgtt
       61 ctccagcaat tccttggccg ccgaaaccct gagcgtctga atgtaggcac cggggacccg
      121 acccgtcgcc gccttgaatc ggcgaatgaa gttgcgcggt cccattccca cgcgttcggc
      181 aagacgtccg atcgagacat cgctgtcgaa atgctgctgc aaatattcct cggtctgtcg
      241 gatcttttcg tccgaatgcg gacgcgataa ctggaccacc gaatatcctg attgccgacc
      301 acgtggcatg ctgagcagca gggacttcgc gcactgcaat gcaacttcat ggccacaaaa
      361 cttctcgacc agatacaggc tcagatctat cgaggcatag actccaccgc tgcagaacag
      421 ccgcccgtct tcagtcacga attgttcggg ctgccagcga accttcggat agcgtttgcg
      481 aaatatttcg gcgacgcccc aatgggtagt tgctcgccgg ccatcgagaa ttccgctttc
      541 ggcaaggaat gcgactccgg agcatgcgcc ggcaatgtag gccccgcgcg catgccactt
      601 tcgcagccac ggcaggagtg gcgtattctc tgcaatatgg tccagcacat cccaaccggg
      661 cgcggacacg atgatgatgt cggtctgatt gatatcgctt attgaacaat caggagtaag
      721 gccgagggag ccggcggcac taactttccg tccatcgacc gaggcggtcc tcacccggaa
      781 ccgtggacgt aaattttcgc cctgcagcca attccagacc acccccgcgg agtgaaagac
      841 ttcaatggga gcaattgccg tcgatgcata cccgccttcg agaacgacga tggtgacatc
      901 cagcacgcgg tctgcgtgcc cgttcgggga tcgtgttgta cgtctgtttc gatgcatcat
      961 cttcctagcc atgaccattc gccttcatgt tcaactggat cggctcccac aggccgacga
     1021 ccgcaccaac cgagtccaga atgagcgcta cgcgcgcgac gccggagaca acgaaagggt
     1081 caacgatgac cttcccgccg agcaaggcag cacggctggc cgcatctttc acgctcttta
     1141 ccagaacata gggcgtccaa tgcgaggcga ttcctttatc aagaagctct tttctcaatt
     1201 gataaaccga gccgatatcg tggctggatg actgcaaacg gataaaactg ccgccatttg
     1261 ccgcctgctc gcgagacgtc cagccgaaca gctcgccata aaacaacttt gcactctcga
     1321 catcggtggc tgccaggtcc atccaacaga actgtccagt atctgctttg ccaatttgcg
     1381 gcatggcgga agcgtcctta acgccctctg cgcgaggttt gcgacgccgc cgatgtcaga
     1441 cccggcggcg tcaccgcgcc ttcacgaatt ggccgtcaac gtatcgatga cggtctttac
     1501 ttcggtgacc ttggtcgccg gaaagccgct caacttggcg tgctcccgaa ctgctgcctc
     1561 gctatcggcc aggtagatgc agaaagtctt attgtcgaca acgtaggaat gatcccactg
     1621 caccttgccg gcgagcttgg ttagcgcgtc gttggaagtc gcagccgcgt ccttgagttg
     1681 cgcgcgattc atcgcgccta cgcccggcag gtcgcgctcg attacatagc gtttcattga
     1741 ttttg
//
